Query 018408
Match_columns 356
No_of_seqs 278 out of 3086
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 08:46:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018408.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018408hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 5.2E-28 1.1E-32 220.6 30.3 266 88-353 12-328 (485)
2 TIGR01299 synapt_SV2 synaptic 100.0 3.8E-27 8.3E-32 227.9 32.1 206 84-291 164-381 (742)
3 KOG0254 Predicted transporter 99.9 6.5E-24 1.4E-28 201.5 29.1 265 86-351 44-350 (513)
4 TIGR00887 2A0109 phosphate:H+ 99.9 2.5E-24 5.3E-29 204.2 23.9 204 85-289 14-250 (502)
5 COG2271 UhpC Sugar phosphate p 99.9 1.8E-25 3.8E-30 196.0 13.3 251 86-352 28-282 (448)
6 PRK10077 xylE D-xylose transpo 99.9 4E-23 8.6E-28 195.1 26.5 204 86-292 11-242 (479)
7 TIGR02332 HpaX 4-hydroxyphenyl 99.9 1.8E-23 3.9E-28 193.3 21.5 182 85-269 6-194 (412)
8 TIGR00898 2A0119 cation transp 99.9 1.5E-23 3.2E-28 199.3 19.5 220 108-331 110-332 (505)
9 TIGR00879 SP MFS transporter, 99.9 1.8E-22 3.9E-27 190.0 26.1 206 83-289 24-241 (481)
10 PRK10642 proline/glycine betai 99.9 3.5E-22 7.5E-27 188.9 25.8 184 87-271 16-219 (490)
11 COG2814 AraJ Arabinose efflux 99.9 2.8E-22 6.1E-27 178.0 23.5 178 85-265 11-189 (394)
12 TIGR00903 2A0129 major facilit 99.9 1.1E-22 2.5E-27 184.6 20.5 214 103-351 7-221 (368)
13 PRK10406 alpha-ketoglutarate t 99.9 7.9E-22 1.7E-26 183.6 25.0 183 85-268 20-222 (432)
14 PRK03545 putative arabinose tr 99.9 8E-22 1.7E-26 181.3 23.3 180 85-267 7-187 (390)
15 TIGR00891 2A0112 putative sial 99.9 2.9E-21 6.2E-26 178.2 26.1 186 84-271 9-195 (405)
16 PRK11663 regulatory protein Uh 99.9 9.5E-22 2.1E-26 183.2 21.4 181 87-270 23-204 (434)
17 PRK12307 putative sialic acid 99.9 2.1E-21 4.6E-26 180.6 23.4 180 86-268 17-196 (426)
18 PRK10213 nepI ribonucleoside t 99.9 4.5E-21 9.7E-26 176.3 24.9 180 85-267 18-198 (394)
19 PRK14995 methyl viologen resis 99.9 3.7E-21 8E-26 182.0 25.0 182 84-268 3-186 (495)
20 PRK15403 multidrug efflux syst 99.9 3.3E-21 7.1E-26 178.3 23.2 174 92-268 21-195 (413)
21 KOG0255 Synaptic vesicle trans 99.9 1E-21 2.2E-26 187.3 19.3 206 122-331 116-327 (521)
22 PF00083 Sugar_tr: Sugar (and 99.9 6.2E-26 1.3E-30 212.6 -9.8 231 92-323 5-249 (451)
23 PLN00028 nitrate transmembrane 99.9 8.8E-21 1.9E-25 178.5 24.9 176 87-266 36-220 (476)
24 TIGR00895 2A0115 benzoate tran 99.9 2.2E-21 4.8E-26 178.4 20.1 186 86-274 16-202 (398)
25 KOG1330 Sugar transporter/spin 99.9 2.2E-23 4.7E-28 184.6 6.0 183 83-267 29-212 (493)
26 TIGR00893 2A0114 d-galactonate 99.9 2.3E-21 5.1E-26 177.8 18.5 168 98-268 5-173 (399)
27 KOG0253 Synaptic vesicle trans 99.9 1.2E-20 2.6E-25 162.1 19.1 199 86-289 77-275 (528)
28 PRK11551 putative 3-hydroxyphe 99.9 5.8E-20 1.3E-24 169.8 25.3 184 84-270 12-196 (406)
29 PRK09556 uhpT sugar phosphate 99.9 3.9E-21 8.5E-26 180.7 17.1 180 88-269 30-217 (467)
30 TIGR00711 efflux_EmrB drug res 99.9 4.2E-20 9.1E-25 174.7 24.0 178 88-268 3-181 (485)
31 TIGR00881 2A0104 phosphoglycer 99.9 1.8E-21 3.8E-26 177.7 13.8 170 96-268 4-175 (379)
32 TIGR00894 2A0114euk Na(+)-depe 99.9 6.5E-21 1.4E-25 179.3 18.0 245 84-349 16-288 (465)
33 TIGR00710 efflux_Bcr_CflA drug 99.9 3.4E-20 7.4E-25 170.0 22.1 177 88-267 6-183 (385)
34 PRK09952 shikimate transporter 99.9 8.6E-20 1.9E-24 170.1 24.9 182 85-270 20-225 (438)
35 PRK15402 multidrug efflux syst 99.9 6.9E-20 1.5E-24 169.3 23.3 181 85-268 11-192 (406)
36 PF07690 MFS_1: Major Facilita 99.9 9.6E-21 2.1E-25 171.3 17.1 172 93-267 2-175 (352)
37 PRK09705 cynX putative cyanate 99.9 1.1E-19 2.4E-24 167.2 24.0 152 104-258 26-177 (393)
38 PRK10091 MFS transport protein 99.9 9.2E-20 2E-24 167.1 22.5 176 89-267 5-181 (382)
39 TIGR00886 2A0108 nitrite extru 99.9 6.7E-20 1.4E-24 167.0 20.9 174 91-268 5-192 (366)
40 TIGR00805 oat sodium-independe 99.9 6.6E-21 1.4E-25 183.9 14.9 250 90-349 36-357 (633)
41 TIGR00900 2A0121 H+ Antiporter 99.9 4.4E-20 9.5E-25 167.7 19.3 168 93-263 5-177 (365)
42 TIGR00890 2A0111 Oxalate/Forma 99.9 4.4E-20 9.5E-25 168.4 19.2 161 103-267 19-180 (377)
43 PRK15034 nitrate/nitrite trans 99.9 2.6E-19 5.6E-24 164.5 23.7 174 87-263 34-230 (462)
44 PRK03893 putative sialic acid 99.8 2.1E-19 4.5E-24 170.5 23.0 184 84-270 17-200 (496)
45 KOG2532 Permease of the major 99.8 4.2E-20 9.2E-25 170.6 17.4 218 116-354 67-290 (466)
46 PRK03699 putative transporter; 99.8 5.1E-19 1.1E-23 162.9 24.6 175 85-262 5-180 (394)
47 PRK11273 glpT sn-glycerol-3-ph 99.8 1.3E-19 2.8E-24 169.7 20.9 175 92-270 34-214 (452)
48 TIGR00806 rfc RFC reduced fola 99.8 9.9E-20 2.2E-24 164.5 19.0 161 104-269 43-207 (511)
49 PRK10504 putative transporter; 99.8 6.4E-19 1.4E-23 166.1 24.8 177 88-267 11-188 (471)
50 PRK11652 emrD multidrug resist 99.8 3.5E-19 7.5E-24 164.0 22.2 181 85-268 6-187 (394)
51 PRK11043 putative transporter; 99.8 5.2E-19 1.1E-23 163.2 22.8 169 96-267 15-183 (401)
52 KOG2533 Permease of the major 99.8 6.2E-20 1.4E-24 169.9 16.5 225 112-351 71-302 (495)
53 PRK10133 L-fucose transporter; 99.8 8.9E-19 1.9E-23 163.0 23.2 149 86-236 25-176 (438)
54 TIGR00712 glpT glycerol-3-phos 99.8 2.2E-19 4.9E-24 167.5 19.1 179 87-269 27-211 (438)
55 PRK10473 multidrug efflux syst 99.8 7.4E-19 1.6E-23 161.7 21.5 171 94-267 10-181 (392)
56 TIGR00885 fucP L-fucose:H+ sym 99.8 1.2E-18 2.7E-23 160.7 22.0 171 89-261 5-203 (410)
57 PRK15075 citrate-proton sympor 99.8 4.1E-18 8.9E-23 158.8 25.2 167 86-254 14-201 (434)
58 PRK10642 proline/glycine betai 99.8 6.9E-19 1.5E-23 166.4 19.9 183 105-289 268-459 (490)
59 PRK03633 putative MFS family t 99.8 8.7E-18 1.9E-22 154.0 25.7 151 88-240 7-157 (381)
60 PRK11195 lysophospholipid tran 99.8 2.4E-18 5.3E-23 158.1 21.2 170 92-268 8-177 (393)
61 TIGR00892 2A0113 monocarboxyla 99.8 1.6E-18 3.5E-23 162.3 19.8 157 104-264 36-193 (455)
62 PRK11102 bicyclomycin/multidru 99.8 1.9E-18 4E-23 158.1 19.6 162 103-267 7-169 (377)
63 PRK05122 major facilitator sup 99.8 2.1E-18 4.6E-23 159.0 18.8 178 86-266 14-200 (399)
64 PRK12382 putative transporter; 99.8 1.1E-17 2.5E-22 153.8 20.8 174 90-266 18-200 (392)
65 PRK10054 putative transporter; 99.8 2.1E-17 4.6E-22 152.0 20.6 171 93-267 13-185 (395)
66 PRK11646 multidrug resistance 99.8 3.6E-17 7.8E-22 150.7 21.9 162 101-266 24-187 (400)
67 TIGR00897 2A0118 polyol permea 99.8 4.3E-17 9.4E-22 150.4 22.4 144 106-252 32-180 (402)
68 PRK09874 drug efflux system pr 99.8 3.2E-17 7E-22 151.6 21.5 177 89-267 16-196 (408)
69 PF06609 TRI12: Fungal trichot 99.8 1.3E-17 2.8E-22 156.6 18.7 164 93-261 50-213 (599)
70 PRK10489 enterobactin exporter 99.8 3.1E-18 6.7E-23 158.9 14.1 170 96-268 26-200 (417)
71 TIGR00899 2A0120 sugar efflux 99.8 5.1E-17 1.1E-21 148.4 21.6 171 95-268 5-180 (375)
72 TIGR00896 CynX cyanate transpo 99.8 4E-17 8.7E-22 148.2 19.8 149 104-256 17-166 (355)
73 PTZ00207 hypothetical protein; 99.8 2.2E-16 4.9E-21 149.1 25.2 175 83-265 24-206 (591)
74 TIGR00883 2A0106 metabolite-pr 99.8 5E-17 1.1E-21 149.1 19.2 170 98-268 4-194 (394)
75 cd06174 MFS The Major Facilita 99.8 3.4E-17 7.4E-22 147.7 16.8 172 91-265 3-174 (352)
76 KOG0252 Inorganic phosphate tr 99.8 5.9E-18 1.3E-22 149.8 10.8 189 83-271 37-252 (538)
77 KOG2615 Permease of the major 99.7 3.4E-17 7.5E-22 141.8 15.1 116 122-238 66-181 (451)
78 COG0738 FucP Fucose permease [ 99.7 2.5E-16 5.4E-21 138.0 19.8 228 89-351 15-265 (422)
79 PRK10207 dipeptide/tripeptide 99.7 9.7E-17 2.1E-21 150.9 18.1 173 89-264 16-193 (489)
80 PRK11010 ampG muropeptide tran 99.7 8.6E-16 1.9E-20 145.1 23.6 175 89-268 14-198 (491)
81 TIGR00924 yjdL_sub1_fam amino 99.7 1.6E-16 3.4E-21 149.3 18.2 171 90-263 13-190 (475)
82 PRK08633 2-acyl-glycerophospho 99.7 2.7E-16 5.9E-21 163.7 21.5 161 108-268 31-203 (1146)
83 COG2223 NarK Nitrate/nitrite t 99.7 2.1E-16 4.5E-21 139.4 17.2 226 89-351 16-247 (417)
84 PRK11902 ampG muropeptide tran 99.7 2E-15 4.4E-20 139.3 23.1 171 93-268 5-185 (402)
85 TIGR01299 synapt_SV2 synaptic 99.7 1.3E-15 2.8E-20 148.1 19.7 140 127-268 598-737 (742)
86 KOG3764 Vesicular amine transp 99.7 7.6E-17 1.6E-21 140.5 9.9 153 113-266 95-248 (464)
87 PRK06814 acylglycerophosphoeth 99.7 1.6E-15 3.5E-20 157.6 21.5 143 124-267 52-197 (1140)
88 TIGR00902 2A0127 phenyl propri 99.7 2.6E-15 5.7E-20 137.7 19.8 159 92-255 9-169 (382)
89 PRK11128 putative 3-phenylprop 99.7 2.8E-15 6.1E-20 137.5 19.6 164 96-266 13-180 (382)
90 TIGR00882 2A0105 oligosacchari 99.7 1.5E-14 3.3E-19 133.3 22.6 169 90-264 5-182 (396)
91 TIGR00901 2A0125 AmpG-related 99.7 1.7E-14 3.8E-19 130.9 20.8 160 104-267 5-181 (356)
92 PRK09584 tppB putative tripept 99.7 7.1E-15 1.5E-19 139.0 18.4 165 91-258 25-194 (500)
93 TIGR00880 2_A_01_02 Multidrug 99.6 2.1E-15 4.5E-20 117.4 11.9 135 131-266 5-140 (141)
94 PRK15462 dipeptide/tripeptide 99.6 1.5E-14 3.2E-19 134.6 18.8 169 90-261 12-185 (493)
95 PRK11551 putative 3-hydroxyphe 99.6 1.9E-14 4E-19 133.1 18.2 159 106-266 239-397 (406)
96 PRK09528 lacY galactoside perm 99.6 3.6E-14 7.9E-19 131.8 19.9 166 94-265 17-191 (420)
97 KOG2504 Monocarboxylate transp 99.6 3.9E-15 8.4E-20 139.5 13.2 157 104-264 63-220 (509)
98 PRK15011 sugar efflux transpor 99.6 6.7E-14 1.4E-18 128.8 21.2 154 109-266 238-392 (393)
99 PRK15011 sugar efflux transpor 99.6 3.1E-13 6.8E-18 124.4 24.1 170 95-268 23-198 (393)
100 COG2807 CynX Cyanate permease 99.6 4.6E-13 1E-17 116.0 22.6 219 92-349 17-235 (395)
101 TIGR00890 2A0111 Oxalate/Forma 99.6 2.2E-14 4.8E-19 130.8 15.0 147 109-258 227-375 (377)
102 TIGR00889 2A0110 nucleoside tr 99.6 1.1E-14 2.3E-19 135.0 12.6 160 108-267 229-405 (418)
103 cd06174 MFS The Major Facilita 99.6 1.2E-13 2.6E-18 124.6 19.0 161 101-264 189-351 (352)
104 PRK05122 major facilitator sup 99.6 1.1E-13 2.5E-18 127.6 18.7 156 107-267 236-391 (399)
105 PRK09528 lacY galactoside perm 99.6 3.9E-14 8.4E-19 131.6 15.4 145 122-267 260-406 (420)
106 TIGR00892 2A0113 monocarboxyla 99.6 6.5E-14 1.4E-18 131.3 16.2 161 97-259 251-415 (455)
107 PRK09556 uhpT sugar phosphate 99.6 1.8E-13 4E-18 128.8 18.7 172 89-263 260-447 (467)
108 TIGR00899 2A0120 sugar efflux 99.6 4.7E-13 1E-17 122.2 19.8 151 112-266 225-375 (375)
109 PRK12382 putative transporter; 99.6 2.4E-13 5.3E-18 125.1 17.7 152 106-262 235-386 (392)
110 TIGR00902 2A0127 phenyl propri 99.5 7.4E-13 1.6E-17 121.4 19.0 155 103-262 221-376 (382)
111 PF05977 MFS_3: Transmembrane 99.5 1.2E-12 2.6E-17 123.4 19.9 172 91-265 14-190 (524)
112 PRK09874 drug efflux system pr 99.5 3.1E-13 6.8E-18 124.9 15.7 137 126-263 260-396 (408)
113 TIGR01301 GPH_sucrose GPH fami 99.5 1.4E-12 3E-17 121.0 19.5 177 90-268 7-222 (477)
114 PRK09952 shikimate transporter 99.5 2E-12 4.3E-17 120.7 20.0 154 112-267 276-435 (438)
115 TIGR00893 2A0114 d-galactonate 99.5 8.3E-13 1.8E-17 121.0 17.2 169 90-261 218-395 (399)
116 TIGR00887 2A0109 phosphate:H+ 99.5 1.4E-12 3E-17 124.0 19.1 162 106-267 307-491 (502)
117 PRK03699 putative transporter; 99.5 1.3E-12 2.8E-17 120.4 18.3 159 104-266 222-381 (394)
118 TIGR00897 2A0118 polyol permea 99.5 1E-12 2.3E-17 121.3 17.8 158 102-264 237-400 (402)
119 PRK10077 xylE D-xylose transpo 99.5 2.6E-12 5.6E-17 121.5 20.4 160 105-267 289-460 (479)
120 TIGR00879 SP MFS transporter, 99.5 8.5E-13 1.8E-17 124.2 16.6 176 89-267 286-473 (481)
121 TIGR00883 2A0106 metabolite-pr 99.5 5.1E-13 1.1E-17 122.5 14.5 157 97-255 229-391 (394)
122 PRK09705 cynX putative cyanate 99.5 2.2E-12 4.8E-17 118.7 18.5 161 104-268 222-385 (393)
123 TIGR00889 2A0110 nucleoside tr 99.5 9.6E-12 2.1E-16 115.3 21.9 166 93-268 8-183 (418)
124 COG2271 UhpC Sugar phosphate p 99.5 4.3E-13 9.4E-18 118.6 11.9 174 85-261 250-430 (448)
125 PRK03893 putative sialic acid 99.5 7.3E-13 1.6E-17 125.8 14.0 144 107-253 295-441 (496)
126 PRK03633 putative MFS family t 99.5 3.6E-12 7.8E-17 116.9 18.1 151 107-263 220-370 (381)
127 PF11700 ATG22: Vacuole efflux 99.5 7.5E-12 1.6E-16 116.8 19.4 177 89-267 283-470 (477)
128 TIGR00891 2A0112 putative sial 99.4 2.4E-12 5.2E-17 118.7 15.8 137 111-249 263-400 (405)
129 PRK03545 putative arabinose tr 99.4 1E-11 2.3E-16 114.2 19.9 148 110-262 229-377 (390)
130 PRK11273 glpT sn-glycerol-3-ph 99.4 8E-12 1.7E-16 117.2 19.0 156 105-263 271-433 (452)
131 PRK10489 enterobactin exporter 99.4 4.5E-12 9.7E-17 117.7 16.9 158 107-267 243-402 (417)
132 TIGR02718 sider_RhtX_FptX side 99.4 1.8E-11 3.9E-16 112.6 20.8 176 89-267 3-186 (390)
133 TIGR00895 2A0115 benzoate tran 99.4 5.9E-12 1.3E-16 115.7 16.6 133 102-236 265-397 (398)
134 TIGR00792 gph sugar (Glycoside 99.4 1.1E-12 2.3E-17 122.5 11.6 156 109-267 22-197 (437)
135 KOG0569 Permease of the major 99.4 2E-11 4.4E-16 112.3 19.4 177 87-267 270-457 (485)
136 PRK11128 putative 3-phenylprop 99.4 1.9E-11 4E-16 112.2 18.9 148 107-259 225-373 (382)
137 PF03137 OATP: Organic Anion T 99.4 2.9E-14 6.3E-19 134.7 -0.6 234 92-331 8-314 (539)
138 PRK11663 regulatory protein Uh 99.4 2.1E-11 4.5E-16 113.8 18.1 170 90-262 246-421 (434)
139 PRK15075 citrate-proton sympor 99.4 3.7E-11 8E-16 112.1 19.7 137 103-241 254-396 (434)
140 PRK12307 putative sialic acid 99.4 3E-11 6.6E-16 112.4 18.9 137 107-246 251-389 (426)
141 TIGR00900 2A0121 H+ Antiporter 99.4 6E-12 1.3E-16 114.3 13.6 131 108-240 232-364 (365)
142 TIGR00898 2A0119 cation transp 99.4 8.5E-12 1.8E-16 118.8 14.6 135 130-267 361-497 (505)
143 PRK10504 putative transporter; 99.4 2.8E-11 6E-16 114.2 17.7 137 102-240 276-416 (471)
144 TIGR02332 HpaX 4-hydroxyphenyl 99.4 1.6E-11 3.6E-16 113.7 15.6 165 90-254 245-410 (412)
145 PRK10406 alpha-ketoglutarate t 99.4 7.3E-11 1.6E-15 110.1 20.0 157 106-265 262-424 (432)
146 PF05977 MFS_3: Transmembrane 99.4 1.9E-11 4.1E-16 115.4 15.9 153 105-260 236-389 (524)
147 TIGR00792 gph sugar (Glycoside 99.4 1.8E-11 3.8E-16 114.4 15.2 119 123-241 256-382 (437)
148 KOG3626 Organic anion transpor 99.3 6.7E-12 1.4E-16 119.3 11.6 233 89-331 99-401 (735)
149 PLN00028 nitrate transmembrane 99.3 2.6E-11 5.6E-16 114.4 15.6 150 111-265 277-433 (476)
150 TIGR00882 2A0105 oligosacchari 99.3 6.5E-11 1.4E-15 109.2 17.4 138 122-260 252-390 (396)
151 KOG0253 Synaptic vesicle trans 99.3 5.1E-12 1.1E-16 109.5 9.2 129 134-265 391-519 (528)
152 PRK11010 ampG muropeptide tran 99.3 1.1E-10 2.4E-15 110.5 19.1 155 110-267 246-405 (491)
153 COG2270 Permeases of the major 99.3 3.8E-11 8.2E-16 106.5 14.6 175 89-267 256-431 (438)
154 COG3104 PTR2 Dipeptide/tripept 99.3 2.4E-11 5.1E-16 110.1 13.3 174 89-265 23-206 (498)
155 KOG2325 Predicted transporter/ 99.3 5E-11 1.1E-15 109.0 15.1 183 85-268 32-233 (488)
156 COG2814 AraJ Arabinose efflux 99.3 9.3E-11 2E-15 104.9 16.5 156 103-263 228-384 (394)
157 PF06813 Nodulin-like: Nodulin 99.3 1.9E-10 4.2E-15 97.3 17.2 160 103-267 18-184 (250)
158 KOG2504 Monocarboxylate transp 99.3 4.9E-11 1.1E-15 112.0 14.4 176 88-265 299-476 (509)
159 TIGR00788 fbt folate/biopterin 99.3 1E-10 2.2E-15 110.0 16.3 174 89-267 28-211 (468)
160 TIGR01272 gluP glucose/galacto 99.3 3.2E-10 6.9E-15 100.7 18.6 160 87-252 140-302 (310)
161 KOG2563 Permease of the major 99.3 8.1E-10 1.8E-14 98.8 20.5 159 79-240 37-203 (480)
162 TIGR00712 glpT glycerol-3-phos 99.3 8.5E-11 1.8E-15 109.8 14.9 158 107-267 271-436 (438)
163 TIGR00894 2A0114euk Na(+)-depe 99.3 1E-10 2.2E-15 110.2 15.3 174 89-265 263-450 (465)
164 TIGR00881 2A0104 phosphoglycer 99.3 4.2E-11 9.1E-16 109.2 12.0 152 92-246 221-378 (379)
165 TIGR02718 sider_RhtX_FptX side 99.3 3.3E-10 7.2E-15 104.2 17.9 148 109-259 230-385 (390)
166 TIGR00903 2A0129 major facilit 99.2 5.8E-10 1.3E-14 101.5 18.3 168 90-266 195-366 (368)
167 TIGR00896 CynX cyanate transpo 99.2 2.3E-10 4.9E-15 103.9 15.6 136 106-244 216-353 (355)
168 PRK10091 MFS transport protein 99.2 9.8E-10 2.1E-14 100.8 18.7 150 110-263 223-374 (382)
169 PRK10213 nepI ribonucleoside t 99.2 2.1E-09 4.5E-14 99.0 20.5 145 110-258 240-384 (394)
170 PRK08633 2-acyl-glycerophospho 99.2 4.8E-10 1E-14 117.2 18.2 143 111-255 257-400 (1146)
171 PF03825 Nuc_H_symport: Nucleo 99.2 2.6E-09 5.7E-14 97.9 20.8 171 94-268 9-183 (400)
172 PRK15402 multidrug efflux syst 99.2 2.3E-09 4.9E-14 99.2 20.6 144 110-257 238-387 (406)
173 KOG4686 Predicted sugar transp 99.2 4.2E-10 9E-15 94.5 13.7 155 84-243 264-418 (459)
174 PRK11646 multidrug resistance 99.2 5.7E-10 1.2E-14 103.0 16.1 151 108-260 229-383 (400)
175 PRK09848 glucuronide transport 99.2 3.8E-10 8.3E-15 105.8 14.7 128 109-238 250-387 (448)
176 TIGR00710 efflux_Bcr_CflA drug 99.2 1.9E-09 4.1E-14 98.7 19.0 133 112-249 232-370 (385)
177 PF03825 Nuc_H_symport: Nucleo 99.2 1.2E-09 2.6E-14 100.1 17.3 170 95-266 215-397 (400)
178 PRK10054 putative transporter; 99.2 4.6E-10 9.9E-15 103.4 14.6 135 122-258 242-377 (395)
179 PRK06814 acylglycerophosphoeth 99.2 5.2E-10 1.1E-14 116.7 16.3 144 108-253 246-410 (1140)
180 PRK10429 melibiose:sodium symp 99.2 4.7E-10 1E-14 105.8 14.5 116 123-238 265-392 (473)
181 PF13347 MFS_2: MFS/sugar tran 99.2 2.2E-10 4.7E-15 106.8 11.6 156 109-266 24-200 (428)
182 PRK15034 nitrate/nitrite trans 99.2 8.9E-10 1.9E-14 101.8 14.7 133 130-262 292-451 (462)
183 COG2223 NarK Nitrate/nitrite t 99.2 3.2E-10 7E-15 100.6 11.2 153 107-262 238-398 (417)
184 PRK11902 ampG muropeptide tran 99.1 1.7E-09 3.7E-14 100.0 16.4 145 111-262 234-387 (402)
185 TIGR00901 2A0125 AmpG-related 99.1 2E-09 4.3E-14 97.8 16.3 118 104-223 226-355 (356)
186 PRK09669 putative symporter Ya 99.1 1E-09 2.2E-14 102.8 14.1 149 109-260 32-199 (444)
187 TIGR00711 efflux_EmrB drug res 99.1 9.8E-10 2.1E-14 104.0 14.1 131 107-239 275-410 (485)
188 PF07690 MFS_1: Major Facilita 99.1 1E-09 2.3E-14 99.0 13.3 126 104-230 223-352 (352)
189 PF13347 MFS_2: MFS/sugar tran 99.1 2.1E-09 4.5E-14 100.2 15.0 146 90-238 228-383 (428)
190 PF01306 LacY_symp: LacY proto 99.1 4.7E-10 1E-14 101.4 10.2 169 89-263 9-186 (412)
191 PRK10429 melibiose:sodium symp 99.1 4.5E-09 9.7E-14 99.2 16.3 167 99-267 18-204 (473)
192 PF05631 DUF791: Protein of un 99.1 2.1E-08 4.5E-13 88.0 18.8 153 112-267 59-219 (354)
193 PRK10133 L-fucose transporter; 99.1 6.6E-09 1.4E-13 97.0 16.9 139 114-257 287-425 (438)
194 PRK14995 methyl viologen resis 99.1 3.7E-09 8E-14 100.4 15.3 128 109-238 281-412 (495)
195 PRK11195 lysophospholipid tran 99.1 8.9E-09 1.9E-13 94.8 16.8 142 111-257 230-372 (393)
196 KOG0252 Inorganic phosphate tr 99.1 1.6E-10 3.5E-15 103.2 4.9 180 88-268 305-501 (538)
197 PRK09669 putative symporter Ya 99.0 1.2E-08 2.7E-13 95.5 17.5 114 126-239 266-388 (444)
198 PRK11102 bicyclomycin/multidru 99.0 3.4E-08 7.4E-13 90.3 19.3 121 112-235 220-345 (377)
199 PF01306 LacY_symp: LacY proto 99.0 5.5E-09 1.2E-13 94.5 13.2 143 123-266 258-402 (412)
200 TIGR00885 fucP L-fucose:H+ sym 99.0 1.8E-08 3.8E-13 93.3 17.0 143 107-252 252-399 (410)
201 COG2807 CynX Cyanate permease 99.0 4.1E-08 8.9E-13 85.7 17.8 157 101-260 222-380 (395)
202 PRK10473 multidrug efflux syst 99.0 1.1E-08 2.3E-13 94.3 15.1 119 112-234 229-348 (392)
203 PF00083 Sugar_tr: Sugar (and 99.0 2.4E-12 5.3E-17 120.7 -9.8 158 106-267 272-439 (451)
204 PRK11043 putative transporter; 99.0 1.2E-07 2.7E-12 87.5 21.2 130 108-240 224-358 (401)
205 PRK11462 putative transporter; 98.9 5.6E-08 1.2E-12 91.3 17.5 147 111-259 34-198 (460)
206 KOG0254 Predicted transporter 98.9 9.6E-08 2.1E-12 91.1 18.9 175 89-267 297-486 (513)
207 COG0477 ProP Permeases of the 98.9 9.1E-08 2E-12 84.0 17.1 154 101-256 16-176 (338)
208 PF11700 ATG22: Vacuole efflux 98.9 4.9E-07 1.1E-11 84.7 22.4 146 124-269 70-252 (477)
209 KOG3762 Predicted transporter 98.9 9.8E-09 2.1E-13 93.7 9.9 165 96-263 380-545 (618)
210 COG2211 MelB Na+/melibiose sym 98.9 6.1E-08 1.3E-12 88.8 14.2 141 96-237 245-394 (467)
211 PRK09848 glucuronide transport 98.9 1.9E-07 4E-12 87.7 17.7 124 111-236 33-174 (448)
212 PRK11462 putative transporter; 98.8 1.5E-07 3.3E-12 88.4 16.7 112 126-237 265-385 (460)
213 PRK11652 emrD multidrug resist 98.8 3E-07 6.5E-12 84.7 18.2 126 112-240 233-361 (394)
214 TIGR00924 yjdL_sub1_fam amino 98.8 2.8E-07 6.1E-12 86.9 18.3 135 126-261 314-464 (475)
215 KOG2532 Permease of the major 98.8 8.5E-08 1.8E-12 89.3 14.4 171 87-264 258-446 (466)
216 TIGR00886 2A0108 nitrite extru 98.8 4E-08 8.7E-13 89.4 9.8 111 112-225 251-365 (366)
217 PRK09584 tppB putative tripept 98.8 6.9E-07 1.5E-11 84.9 18.4 133 126-258 318-472 (500)
218 KOG3764 Vesicular amine transp 98.7 3.2E-08 7E-13 87.2 7.5 170 89-261 272-450 (464)
219 TIGR01272 gluP glucose/galacto 98.7 1E-07 2.2E-12 84.8 10.3 147 172-350 5-168 (310)
220 TIGR00926 2A1704 Peptide:H+ sy 98.7 6.3E-07 1.4E-11 86.9 15.9 151 110-262 11-179 (654)
221 TIGR00788 fbt folate/biopterin 98.7 1.3E-07 2.8E-12 89.0 10.7 150 115-266 281-447 (468)
222 PF01770 Folate_carrier: Reduc 98.7 6.7E-07 1.4E-11 80.8 14.5 158 110-269 27-186 (412)
223 KOG2816 Predicted transporter 98.7 5.7E-07 1.2E-11 83.5 14.3 169 93-268 28-203 (463)
224 PF03209 PUCC: PUCC protein; 98.7 3.9E-06 8.5E-11 75.1 18.9 130 113-245 6-157 (403)
225 COG0738 FucP Fucose permease [ 98.7 1E-06 2.2E-11 78.3 14.6 156 87-248 236-392 (422)
226 KOG4686 Predicted sugar transp 98.6 2.3E-08 5E-13 84.2 4.0 153 84-238 41-197 (459)
227 COG2211 MelB Na+/melibiose sym 98.6 2.3E-06 4.9E-11 78.7 15.3 160 106-267 31-210 (467)
228 PF06609 TRI12: Fungal trichot 98.6 2.8E-06 6.1E-11 80.8 16.0 145 89-233 312-461 (599)
229 PRK10207 dipeptide/tripeptide 98.6 4E-06 8.6E-11 79.4 16.8 136 126-261 311-472 (489)
230 PF05978 UNC-93: Ion channel r 98.5 7.6E-06 1.7E-10 64.2 14.8 107 129-236 42-148 (156)
231 KOG0255 Synaptic vesicle trans 98.5 9.4E-06 2E-10 77.7 17.9 138 130-268 356-496 (521)
232 TIGR01301 GPH_sucrose GPH fami 98.5 3.5E-06 7.6E-11 78.7 14.3 140 128-267 309-474 (477)
233 PF03209 PUCC: PUCC protein; 98.4 4.4E-05 9.5E-10 68.6 19.2 148 111-260 233-393 (403)
234 PF06779 DUF1228: Protein of u 98.4 2E-06 4.4E-11 59.4 8.5 80 99-180 4-83 (85)
235 TIGR00769 AAA ADP/ATP carrier 98.4 7.2E-05 1.6E-09 69.7 21.1 147 87-237 7-189 (472)
236 PRK15403 multidrug efflux syst 98.4 3.3E-05 7.1E-10 71.7 18.5 141 106-251 237-383 (413)
237 PF03092 BT1: BT1 family; Int 98.4 9.2E-06 2E-10 75.6 14.0 155 108-266 11-176 (433)
238 PTZ00207 hypothetical protein; 98.3 6.9E-06 1.5E-10 78.5 12.9 160 110-271 376-559 (591)
239 KOG2533 Permease of the major 98.3 1.6E-05 3.5E-10 74.5 13.6 160 88-250 274-441 (495)
240 PF12832 MFS_1_like: MFS_1 lik 98.3 8.6E-06 1.9E-10 55.8 8.4 68 94-163 7-74 (77)
241 KOG2615 Permease of the major 98.0 6.5E-05 1.4E-09 66.5 11.2 123 115-239 290-414 (451)
242 COG2270 Permeases of the major 98.0 0.00051 1.1E-08 61.9 16.7 144 123-267 57-223 (438)
243 PRK15462 dipeptide/tripeptide 98.0 0.00077 1.7E-08 63.5 17.6 112 126-237 310-438 (493)
244 KOG0637 Sucrose transporter an 97.9 3.6E-05 7.8E-10 69.6 8.1 136 99-236 44-202 (498)
245 KOG3574 Acetyl-CoA transporter 97.9 0.00043 9.3E-09 61.3 13.6 147 86-237 30-193 (510)
246 PF00854 PTR2: POT family; In 97.8 0.0002 4.3E-09 65.5 10.5 108 155-263 2-121 (372)
247 KOG1237 H+/oligopeptide sympor 97.7 0.002 4.2E-08 61.9 16.3 155 106-263 57-243 (571)
248 PF06963 FPN1: Ferroportin1 (F 97.6 0.0066 1.4E-07 56.1 17.7 147 89-237 260-416 (432)
249 KOG2816 Predicted transporter 97.6 0.0027 5.9E-08 59.3 14.9 122 112-236 267-389 (463)
250 KOG3098 Uncharacterized conser 97.5 0.0019 4.1E-08 59.7 13.0 102 130-232 56-157 (461)
251 PF03219 TLC: TLC ATP/ADP tran 97.4 0.015 3.2E-07 54.8 17.7 150 85-238 22-205 (491)
252 KOG3098 Uncharacterized conser 97.4 0.034 7.4E-07 51.6 18.9 106 126-232 281-407 (461)
253 PF02487 CLN3: CLN3 protein; 97.3 0.0043 9.4E-08 56.4 12.5 108 125-236 282-394 (402)
254 PRK03612 spermidine synthase; 97.3 0.042 9.1E-07 52.5 19.8 140 115-257 43-190 (521)
255 COG3202 ATP/ADP translocase [E 97.3 0.084 1.8E-06 48.9 20.3 151 86-240 26-211 (509)
256 KOG1479 Nucleoside transporter 97.2 0.03 6.5E-07 50.8 16.5 91 177-268 117-207 (406)
257 COG3104 PTR2 Dipeptide/tripept 97.2 0.026 5.7E-07 52.3 16.3 134 126-260 326-482 (498)
258 KOG1330 Sugar transporter/spin 97.2 0.003 6.6E-08 57.7 9.5 151 92-244 249-417 (493)
259 KOG2563 Permease of the major 97.1 0.0033 7.1E-08 57.3 8.8 151 115-267 294-452 (480)
260 PF02487 CLN3: CLN3 protein; 97.0 0.0017 3.8E-08 59.0 6.7 125 133-263 68-193 (402)
261 KOG4332 Predicted sugar transp 97.0 0.001 2.2E-08 56.3 4.3 91 112-205 62-153 (454)
262 PF13000 Acatn: Acetyl-coenzym 97.0 0.0043 9.4E-08 57.3 8.6 143 90-237 3-178 (544)
263 PF03137 OATP: Organic Anion T 96.7 0.00039 8.4E-09 66.4 0.0 152 86-239 304-514 (539)
264 PF03092 BT1: BT1 family; Int 96.6 0.011 2.4E-07 55.2 9.0 146 122-267 253-415 (433)
265 KOG2325 Predicted transporter/ 96.6 0.0064 1.4E-07 56.6 7.0 74 184-258 395-468 (488)
266 TIGR00805 oat sodium-independe 96.5 0.022 4.7E-07 56.0 10.1 80 89-170 332-415 (633)
267 TIGR00939 2a57 Equilibrative N 96.3 0.044 9.6E-07 51.1 10.6 88 176-268 105-199 (437)
268 PF06963 FPN1: Ferroportin1 (F 96.2 1 2.2E-05 41.9 20.3 168 90-259 5-194 (432)
269 KOG3762 Predicted transporter 96.1 0.0055 1.2E-07 57.0 3.8 83 90-174 14-97 (618)
270 TIGR00939 2a57 Equilibrative N 95.9 0.13 2.8E-06 48.0 11.8 108 126-234 309-429 (437)
271 KOG3810 Micronutrient transpor 95.6 0.022 4.8E-07 50.3 5.0 132 137-269 55-187 (433)
272 KOG3097 Predicted membrane pro 95.6 0.089 1.9E-06 46.1 8.6 97 136-233 70-181 (390)
273 PF01770 Folate_carrier: Reduc 95.0 0.9 1.9E-05 41.7 13.7 95 125-219 286-382 (412)
274 PF01733 Nucleoside_tran: Nucl 93.5 0.026 5.7E-07 50.1 0.6 107 129-235 187-306 (309)
275 KOG0637 Sucrose transporter an 90.5 0.23 5E-06 45.7 3.0 129 128-256 336-487 (498)
276 KOG1479 Nucleoside transporter 88.9 3.1 6.6E-05 38.1 8.8 108 126-233 284-399 (406)
277 PF13000 Acatn: Acetyl-coenzym 87.7 14 0.00031 34.9 12.4 60 181-240 409-468 (544)
278 TIGR00880 2_A_01_02 Multidrug 87.6 7.8 0.00017 28.7 9.5 43 125-167 88-130 (141)
279 KOG3626 Organic anion transpor 87.5 3.7 8E-05 40.7 8.9 79 89-169 394-476 (735)
280 KOG3880 Predicted small molecu 87.1 3.5 7.7E-05 36.3 7.6 75 162-236 327-401 (409)
281 PF06912 DUF1275: Protein of u 86.7 17 0.00036 30.1 17.0 39 130-168 52-93 (209)
282 COG4262 Predicted spermidine s 86.5 24 0.00053 31.8 14.0 95 109-204 29-132 (508)
283 PF07672 MFS_Mycoplasma: Mycop 86.5 8.6 0.00019 33.0 9.5 101 127-228 144-254 (267)
284 KOG4332 Predicted sugar transp 85.3 24 0.00053 30.7 11.9 133 126-259 284-425 (454)
285 TIGR00806 rfc RFC reduced fola 84.7 15 0.00033 34.8 11.1 95 126-220 300-396 (511)
286 COG5336 Uncharacterized protei 82.8 6.8 0.00015 28.2 6.1 26 131-156 49-75 (116)
287 TIGR00769 AAA ADP/ATP carrier 82.2 46 0.001 31.6 16.3 71 184-255 273-344 (472)
288 PF11947 DUF3464: Protein of u 79.0 19 0.00042 28.0 8.1 51 175-228 95-145 (153)
289 PF07672 MFS_Mycoplasma: Mycop 78.3 1.8 3.9E-05 37.0 2.5 56 209-264 2-61 (267)
290 PRK10263 DNA translocase FtsK; 77.1 16 0.00035 38.7 9.1 21 133-153 61-81 (1355)
291 PF07857 DUF1632: CEO family ( 76.1 7.4 0.00016 33.3 5.6 23 243-265 114-136 (254)
292 COG1422 Predicted membrane pro 74.5 31 0.00067 28.1 8.3 12 223-234 32-43 (201)
293 PF01733 Nucleoside_tran: Nucl 73.6 1.1 2.3E-05 39.9 0.0 79 185-268 5-87 (309)
294 PF03219 TLC: TLC ATP/ADP tran 72.1 94 0.002 29.7 19.1 65 185-250 290-355 (491)
295 KOG3810 Micronutrient transpor 71.2 47 0.001 30.2 9.4 110 126-238 273-384 (433)
296 COG4792 EscU Type III secretor 70.8 73 0.0016 27.9 15.1 56 274-329 215-271 (349)
297 KOG1237 H+/oligopeptide sympor 67.4 84 0.0018 30.7 11.3 79 158-236 422-517 (571)
298 PF02632 BioY: BioY family; I 67.3 42 0.00091 26.1 7.6 26 130-155 59-84 (148)
299 TIGR01666 YCCS hypothetical me 63.7 1.2E+02 0.0026 30.5 11.7 50 145-194 44-98 (704)
300 PF12805 FUSC-like: FUSC-like 63.6 62 0.0013 28.3 8.9 36 159-194 4-40 (284)
301 COG1268 BioY Uncharacterized c 62.1 52 0.0011 26.7 7.4 24 130-153 88-111 (184)
302 COG1230 CzcD Co/Zn/Cd efflux s 61.6 1.1E+02 0.0025 26.9 13.3 80 84-171 22-104 (296)
303 TIGR01667 YCCS_YHJK integral m 61.0 1.9E+02 0.0041 29.2 12.6 51 144-194 43-98 (701)
304 KOG3880 Predicted small molecu 60.2 7.4 0.00016 34.4 2.4 122 134-263 72-197 (409)
305 TIGR00926 2A1704 Peptide:H+ sy 59.5 56 0.0012 32.5 8.6 60 178-237 566-625 (654)
306 KOG2601 Iron transporter [Inor 59.3 1.5E+02 0.0032 27.4 13.6 39 134-172 73-111 (503)
307 COG1288 Predicted membrane pro 56.9 1.7E+02 0.0037 27.4 12.1 98 160-258 360-472 (481)
308 PF11299 DUF3100: Protein of u 51.5 12 0.00026 31.2 2.2 49 182-231 176-224 (241)
309 PF01528 Herpes_glycop: Herpes 48.2 2.2E+02 0.0048 26.1 10.1 34 173-206 230-263 (374)
310 PRK10692 hypothetical protein; 47.5 65 0.0014 22.3 4.8 19 153-171 3-21 (92)
311 COG3619 Predicted membrane pro 47.3 1.7E+02 0.0038 24.6 16.3 31 123-153 54-84 (226)
312 PRK10697 DNA-binding transcrip 45.4 17 0.00038 26.9 2.1 12 258-269 57-68 (118)
313 PF11151 DUF2929: Protein of u 44.5 81 0.0017 20.0 5.4 25 243-267 31-55 (57)
314 PF06779 DUF1228: Protein of u 44.4 1.1E+02 0.0023 21.3 7.9 69 188-260 5-73 (85)
315 TIGR02235 menA_cyano-plnt 1,4- 43.9 1.8E+02 0.0039 25.5 8.5 8 206-213 127-134 (285)
316 KOG3574 Acetyl-CoA transporter 41.8 2.4E+02 0.0052 26.3 8.8 58 184-241 376-433 (510)
317 COG4769 Predicted membrane pro 39.8 1.2E+02 0.0026 24.0 5.8 52 133-190 82-133 (181)
318 PF10762 DUF2583: Protein of u 39.6 86 0.0019 21.5 4.4 18 153-170 3-20 (89)
319 PF10785 NADH-u_ox-rdase: NADH 39.3 1.3E+02 0.0028 20.9 5.7 40 137-176 31-77 (86)
320 PF03547 Mem_trans: Membrane t 39.1 1.1E+02 0.0024 27.9 6.9 18 314-331 237-254 (385)
321 TIGR02230 ATPase_gene1 F0F1-AT 39.0 1.5E+02 0.0032 21.4 6.7 6 144-149 62-67 (100)
322 PF07760 DUF1616: Protein of u 39.0 2.7E+02 0.0058 24.4 9.7 56 180-236 22-77 (287)
323 PTZ00265 multidrug resistance 36.9 6.4E+02 0.014 28.2 17.0 19 243-261 197-215 (1466)
324 TIGR00844 c_cpa1 na(+)/h(+) an 36.8 4.4E+02 0.0096 27.0 10.7 11 89-99 13-23 (810)
325 PRK14229 camphor resistance pr 35.4 1.8E+02 0.0038 21.3 9.0 22 186-207 58-79 (108)
326 COG3389 Uncharacterized protei 34.2 90 0.0019 26.1 4.6 30 130-159 34-63 (277)
327 COG4208 CysW ABC-type sulfate 33.5 2.8E+02 0.0061 23.6 7.4 46 195-240 84-129 (287)
328 KOG3312 Predicted membrane pro 32.8 1.5E+02 0.0033 22.9 5.3 26 259-284 25-50 (186)
329 TIGR02978 phageshock_pspC phag 32.2 51 0.0011 24.7 2.8 11 259-269 53-63 (121)
330 COG5336 Uncharacterized protei 31.9 1.5E+02 0.0032 21.6 4.9 32 165-196 61-92 (116)
331 PRK02237 hypothetical protein; 31.6 1.2E+02 0.0026 22.1 4.4 46 126-171 58-103 (109)
332 PF01405 PsbT: Photosystem II 31.4 89 0.0019 16.6 2.9 11 259-269 18-28 (29)
333 PF02694 UPF0060: Uncharacteri 30.7 95 0.0021 22.5 3.8 46 126-171 56-101 (107)
334 PF06123 CreD: Inner membrane 30.5 4.6E+02 0.01 24.6 11.8 14 146-159 344-357 (430)
335 PF04474 DUF554: Protein of un 30.1 2E+02 0.0044 24.2 6.2 59 132-191 10-68 (226)
336 PF06341 DUF1056: Protein of u 29.8 1.6E+02 0.0035 19.1 5.5 36 176-212 27-62 (63)
337 PF04145 Ctr: Ctr copper trans 29.8 75 0.0016 24.2 3.6 11 345-355 131-141 (144)
338 COG3202 ATP/ADP translocase [E 29.4 5.2E+02 0.011 24.8 17.9 72 185-257 292-365 (509)
339 PF12273 RCR: Chitin synthesis 28.2 21 0.00046 27.0 0.2 11 245-255 2-12 (130)
340 PF07456 Hpre_diP_synt_I: Hept 28.0 2.6E+02 0.0057 21.8 6.1 50 131-186 68-117 (148)
341 PRK11715 inner membrane protei 28.0 5.2E+02 0.011 24.4 11.7 7 147-153 351-357 (436)
342 COG1811 Uncharacterized membra 28.0 3E+02 0.0065 23.0 6.6 52 133-184 12-63 (228)
343 PRK11875 psbT photosystem II r 26.7 1.1E+02 0.0024 16.5 2.7 10 260-269 19-28 (31)
344 COG2274 SunT ABC-type bacterio 26.7 6.9E+02 0.015 25.4 18.8 15 137-151 170-184 (709)
345 PRK07419 1,4-dihydroxy-2-napht 25.9 4.7E+02 0.01 23.2 10.1 12 203-214 137-148 (304)
346 PF07662 Nucleos_tra2_C: Na+ d 25.8 3.9E+02 0.0085 22.2 7.9 30 179-208 150-179 (210)
347 PF06123 CreD: Inner membrane 25.8 5.6E+02 0.012 24.1 9.9 66 147-216 314-384 (430)
348 COG1079 Uncharacterized ABC-ty 25.4 4.8E+02 0.01 23.2 12.4 95 138-236 21-117 (304)
349 PF04550 Phage_holin_2: Phage 25.2 1.6E+02 0.0035 20.5 4.0 30 178-207 32-61 (89)
350 PF02990 EMP70: Endomembrane p 25.1 1.8E+02 0.004 28.0 5.9 26 209-234 293-318 (521)
351 PRK11715 inner membrane protei 25.1 5.9E+02 0.013 24.0 9.8 67 146-216 319-390 (436)
352 PF04281 Tom22: Mitochondrial 24.9 2.2E+02 0.0047 21.9 5.1 25 201-225 59-83 (137)
353 KOG2881 Predicted membrane pro 24.9 3.6E+02 0.0079 23.3 6.8 11 244-254 130-140 (294)
354 PF11712 Vma12: Endoplasmic re 24.5 2.9E+02 0.0063 21.2 6.0 15 132-146 83-97 (142)
355 PF05631 DUF791: Protein of un 24.3 5.5E+02 0.012 23.4 17.8 97 137-233 176-298 (354)
356 PF06645 SPC12: Microsomal sig 24.2 2.3E+02 0.0051 19.1 5.1 10 140-149 23-32 (76)
357 PLN02332 membrane bound O-acyl 24.2 3.2E+02 0.0069 26.0 7.3 28 154-181 341-368 (465)
358 PF06570 DUF1129: Protein of u 23.5 4.2E+02 0.0091 21.8 11.1 12 252-263 185-196 (206)
359 KOG2765 Predicted membrane pro 23.4 1.4E+02 0.003 27.3 4.3 13 148-160 208-220 (416)
360 CHL00031 psbT photosystem II p 23.4 1.3E+02 0.0028 16.5 2.6 10 260-269 19-28 (33)
361 COG2119 Predicted membrane pro 23.1 3.4E+02 0.0074 22.1 6.0 38 132-169 142-179 (190)
362 PF00854 PTR2: POT family; In 22.8 2.5E+02 0.0053 25.5 6.2 74 101-174 45-122 (372)
363 COG5202 Predicted membrane pro 21.9 6.1E+02 0.013 23.1 9.0 102 150-255 345-455 (512)
364 KOG2927 Membrane component of 21.3 58 0.0013 29.1 1.6 10 223-232 224-233 (372)
365 KOG0055 Multidrug/pheromone ex 20.5 1.1E+03 0.024 25.6 16.3 35 84-118 661-695 (1228)
366 TIGR00986 3a0801s05tom22 mitoc 20.4 2.6E+02 0.0057 21.6 4.7 24 201-224 57-80 (145)
367 COG4177 LivM ABC-type branched 20.4 4.3E+02 0.0094 23.6 6.9 18 220-237 250-267 (314)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=5.2e-28 Score=220.63 Aligned_cols=266 Identities=30% Similarity=0.573 Sum_probs=216.0
Q ss_pred HHHHHHHHHHHHHhhhhcchhhHHHHH--------HHhCCCCCh----hHHHHHHHHHHHHHHHHHHhHHhhhhhhchhH
Q 018408 88 HVLIASMSNFLFGYHIGVMNGPIVSIA--------KELGFEGNP----ILEGLVVSIFIAGAFVGSISSGSLADKLGCRR 155 (356)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~ 155 (356)
....+.++.+..||....+++..+.+. +.+|...++ ...+.+++++.+|.++|+++.++++||+|||.
T Consensus 12 ~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~ 91 (485)
T KOG0569|consen 12 AVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKN 91 (485)
T ss_pred HHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH
Confidence 345556666888999988888765443 335533333 24677888999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHh---hhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHh
Q 018408 156 TFQIDTIPLILGAIISAQA---HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFL 232 (356)
Q Consensus 156 ~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i 232 (356)
.++++.++..++.++..++ +++.+++++|++.|+..|......+.|+.|..|.+.||....+.+++..+|..++..+
T Consensus 92 ~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~ 171 (485)
T KOG0569|consen 92 ALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVL 171 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHH
Confidence 9999988888888777654 6888999999999999999999999999999999999999999999999999999776
Q ss_pred hhc-cCCCCchhHHHHHHhHHHHHHHHHHhhcccCChHHHHh-cCCHHHHHHHHHHHcCCcchHHHHHHHHHHHHhcCC-
Q 018408 233 GIP-AEDDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCK-GGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGS- 309 (356)
Q Consensus 233 ~~~-l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 309 (356)
+.. +......|.+.+.+.++++++..+...++||||+|+.. +++.+||++.++.+|++++++++.++..++.++++.
T Consensus 172 ~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~ 251 (485)
T KOG0569|consen 172 GLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELE 251 (485)
T ss_pred ccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccc
Confidence 543 33333339999999999999999999999999999987 899999999999999998766655554444433322
Q ss_pred -CCccchhhhcccCcchhhHHHH--------------------------------HHHHHHHHHHHHHHHhhhhhhc
Q 018408 310 -DLDSQWSELLEEPHSRVAFIGD--------------------------------GALASLLVGVTNFAGLRSEKYC 353 (356)
Q Consensus 310 -~~~~~~~~~l~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~ 353 (356)
+++.++++++++|..|+..+.. +..++...++++++.++.+.++
T Consensus 252 ~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~l 328 (485)
T KOG0569|consen 252 KKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFL 328 (485)
T ss_pred cccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2467999999999888764333 5788888899999988887664
No 2
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.96 E-value=3.8e-27 Score=227.88 Aligned_cols=206 Identities=22% Similarity=0.272 Sum_probs=182.4
Q ss_pred hhHHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHH
Q 018408 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (356)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 163 (356)
..+..+++++++.+..+++...++..+|.+.+++|+ +..+.+++.+++.+|++++.+++|+++||+|||+++++++++
T Consensus 164 ~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gl--s~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil 241 (742)
T TIGR01299 164 FQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCI--PDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSV 241 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 344556667777888888888888999999999998 566689999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCC---
Q 018408 164 LILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP--- 240 (356)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~--- 240 (356)
.+++.++++++++++.++++|++.|++.|+..+....++.|++|++.||+.+++..+++.+|.++++.++..+....
T Consensus 242 ~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~ 321 (742)
T TIGR01299 242 NGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWS 321 (742)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999988765443211
Q ss_pred ---------chhHHHHHHhHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHcCCc
Q 018408 241 ---------HWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGES 291 (356)
Q Consensus 241 ---------~~w~~~~~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~ 291 (356)
.+||+.+++.+++.++.++..+++||+|+|+..+++.+++.+.+++++..+
T Consensus 322 ~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n 381 (742)
T TIGR01299 322 FQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTN 381 (742)
T ss_pred hccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCC
Confidence 139999999888888888888889999999999999999999999887654
No 3
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.94 E-value=6.5e-24 Score=201.50 Aligned_cols=265 Identities=34% Similarity=0.603 Sum_probs=204.0
Q ss_pred HHHHHHHHHHHHHHHhh--hhcchhhHHHHHHHhCCC---CCh--hHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHH
Q 018408 86 FPHVLIASMSNFLFGYH--IGVMNGPIVSIAKELGFE---GNP--ILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQ 158 (356)
Q Consensus 86 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~---~~~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~ 158 (356)
....+...++.+..+++ .+...+....+.+..... .+. .+.+++.+.+.+|..+++++.|+++|++|||+.++
T Consensus 44 ~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~ 123 (513)
T KOG0254|consen 44 ILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLL 123 (513)
T ss_pred HHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 44456667777777775 455555555555533211 111 23589999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCC
Q 018408 159 IDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED 238 (356)
Q Consensus 159 ~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 238 (356)
++.++..++.+++++++|+..++++|++.|+|.|+...+.+.|++|+.|++.||...++.+....+|..++..++....+
T Consensus 124 ~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~ 203 (513)
T KOG0254|consen 124 LAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSK 203 (513)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999665554433
Q ss_pred C-CchhHHHHHHhHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHcC--CcchHHHHHHHHHHHH-hc-CCCCcc
Q 018408 239 D-PHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWG--ESEINKAIEEFQLVIK-KD-GSDLDS 313 (356)
Q Consensus 239 ~-~~~w~~~~~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~-~~~~~~ 313 (356)
. .+ ||..+.+..+++++.++..+++||+|+|+.++++.+++++.++++++ +.+.+.+.++.+.... +. ......
T Consensus 204 ~~~~-Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (513)
T KOG0254|consen 204 VYAG-WRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKA 282 (513)
T ss_pred CCcc-HHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccc
Confidence 2 25 99999999999998888888899999999999999999999999998 3444444444442211 11 111122
Q ss_pred chhhhcccCcchhhHHHH-----------------------------H-HHHHHHHHHHHHHHhhhhh
Q 018408 314 QWSELLEEPHSRVAFIGD-----------------------------G-ALASLLVGVTNFAGLRSEK 351 (356)
Q Consensus 314 ~~~~~l~~~~~~~~~~~~-----------------------------~-~~~~~~~~~~~~~~~~~~~ 351 (356)
.+.++++....++..+++ . .....+++++++++++++.
T Consensus 283 ~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~ 350 (513)
T KOG0254|consen 283 SWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVAT 350 (513)
T ss_pred cHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 467777744455555454 2 5666777777777777663
No 4
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.93 E-value=2.5e-24 Score=204.17 Aligned_cols=204 Identities=21% Similarity=0.306 Sum_probs=170.8
Q ss_pred hHHHHHHHHHHHHHHHhhhhcchhhHHHHHHHh-C--CCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhH
Q 018408 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKEL-G--FEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDT 161 (356)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g--~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~ 161 (356)
.+..+.++.++.+.++++....+...|.+..++ + ...++.+.+++.+.+.+++.++.++.|+++||+|||+++.++.
T Consensus 14 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~ 93 (502)
T TIGR00887 14 HFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMEL 93 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 345567788889999999999998888777653 1 1224556789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhh------HHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhc
Q 018408 162 IPLILGAIISAQAHS------LDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIP 235 (356)
Q Consensus 162 ~~~~i~~~~~~~~~~------~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 235 (356)
++..++.++++++++ +..++++|++.|++.|+..+....+++|++|+++||+++++.+.+..+|..+++.++..
T Consensus 94 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~ 173 (502)
T TIGR00887 94 IIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALI 173 (502)
T ss_pred HHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888765 67899999999999999999999999999999999999999999999999888877654
Q ss_pred cCC-----------------------CCchhHHHHHHhHHHHHHHHHHhhcccCChHHHHhcCCH-HHHHHHHHHHcC
Q 018408 236 AED-----------------------DPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGML-NDAKAVIANLWG 289 (356)
Q Consensus 236 l~~-----------------------~~~~w~~~~~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~-~~~~~~~~~~~~ 289 (356)
+.. ..+ ||+.+.+.+++.++..+..+++||+|+|+..+++. +++++.+++.++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~ 250 (502)
T TIGR00887 174 VLAGFKHSLEAAADEASCTGSCVPAVDYM-WRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQ 250 (502)
T ss_pred HHHHhccccccccccccccccccchhccc-HHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhc
Confidence 321 124 99999998888888888888899999999887765 446666666544
No 5
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.8e-25 Score=195.96 Aligned_cols=251 Identities=14% Similarity=0.078 Sum_probs=203.1
Q ss_pred HHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHH
Q 018408 86 FPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLI 165 (356)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 165 (356)
+..++.+.+++....+....++...|.+.++.++ +..+.|++.+.+.+.|.++.++.|.++||.+.|+.+.+++++.+
T Consensus 28 ~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~l--sk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsa 105 (448)
T COG2271 28 IQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGL--SKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSA 105 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHH
Confidence 4557778888998888999999999999999998 67779999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhh--hccCCCCchh
Q 018408 166 LGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLG--IPAEDDPHWW 243 (356)
Q Consensus 166 i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~--~~l~~~~~~w 243 (356)
+.+++++++++...+.++.++.|.++|...|.+...++.|+|+++||+..++++.+.++|+.+.+++. +.+..+.+ |
T Consensus 106 i~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~-w 184 (448)
T COG2271 106 IVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGG-W 184 (448)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccc-h
Confidence 99999999999999999999999999999999999999999999999999999999999999999998 88877776 9
Q ss_pred HHHHHHhHHHHHHHHHH-hhcccCChHHHHhcCCHHHHHHHHHHHcCCcchHHHHHHHHHHHHhc-CCCCccchhhhccc
Q 018408 244 RTMLYIASLPGFILALG-MQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKD-GSDLDSQWSELLEE 321 (356)
Q Consensus 244 ~~~~~~~~~~~~~~~~~-~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ 321 (356)
|..|++.++++++..+. ++..+++|.-.- ...+++++++..+.. +++.+.+ ...++.-++.+|+|
T Consensus 185 ~~~f~~pgiiaiival~~~~~~rd~Pqs~G--------LP~ie~~~~d~~e~~-----~~~~~~~~ls~~~i~~~YVL~N 251 (448)
T COG2271 185 RAAFYFPGIIAIIVALILLFLLRDRPQSEG--------LPPIEEYRGDPLEIY-----EEEKENEGLTAWQIFVKYVLKN 251 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCccccC--------CCCHHHhhcCchhhh-----hhhccCCCccHHHHHHHHHHcC
Confidence 99999988887776554 455777774211 111122222211110 1111111 11123456668999
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHhhhhhh
Q 018408 322 PHSRVAFIGDGALASLLVGVTNFAGLRSEKY 352 (356)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (356)
|.+|.+.++..+...+-+++..|.+.++.-.
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~ 282 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEV 282 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh
Confidence 9999999999887788888888777776543
No 6
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.92 E-value=4e-23 Score=195.07 Aligned_cols=204 Identities=25% Similarity=0.530 Sum_probs=173.0
Q ss_pred HHHHHHHHHHHHHHHhhhhcchhhHHHHHHHh--------CCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHH
Q 018408 86 FPHVLIASMSNFLFGYHIGVMNGPIVSIAKEL--------GFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTF 157 (356)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~ 157 (356)
.+.++.+.++.+..+++...+++..|.+.+.+ +. +..+.+++.+.+.++..++++++|+++||+|||+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~ 88 (479)
T PRK10077 11 FSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESA--ANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSL 88 (479)
T ss_pred HHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 44566777888999999999999999898887 44 566789999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHh------------hhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHH
Q 018408 158 QIDTIPLILGAIISAQA------------HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLG 225 (356)
Q Consensus 158 ~~~~~~~~i~~~~~~~~------------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g 225 (356)
+++.++.+++.+..++. +.+..++++|+++|++.|+..+....+++|++|+++||+++++.+.+..+|
T Consensus 89 ~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G 168 (479)
T PRK10077 89 KIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFG 168 (479)
T ss_pred HHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHH
Confidence 99999998888877653 235677899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccC--------CCCchhHHHHHHhHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHcCCcc
Q 018408 226 IITSLFLGIPAE--------DDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESE 292 (356)
Q Consensus 226 ~~~~~~i~~~l~--------~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~ 292 (356)
.++++.++..+. +..+ ||+.|++.+++.++..+..+++||+|+++..+++.+++++..++.++.++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~g-Wr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~ 242 (479)
T PRK10077 169 QLVVYFVNYFIARSGDASWLNTDG-WRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTL 242 (479)
T ss_pred HHHHHHHHHHHhccCcccccccCC-hHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChh
Confidence 999887765432 3345 99999998888777777778899999998888888888777777665443
No 7
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.92 E-value=1.8e-23 Score=193.30 Aligned_cols=182 Identities=16% Similarity=0.191 Sum_probs=162.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHH
Q 018408 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (356)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 164 (356)
+++.+..+.++++..+++....+...|.+.+++|+ +..+.+++.+++.+++.+++++.|+++||+|||+++..+.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGL--SATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCC--CHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 46667777888888889999999999999999999 5677999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCC------
Q 018408 165 ILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED------ 238 (356)
Q Consensus 165 ~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~------ 238 (356)
+++.+++++++|++.+++.|++.|++.+...+....++.|++|+++|++++++++.+..+|..+++.+++.+.+
T Consensus 84 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 163 (412)
T TIGR02332 84 GIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMA 163 (412)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999887753
Q ss_pred CCchhHHHHHHhHHHHHHHH-HHhhcccCChH
Q 018408 239 DPHWWRTMLYIASLPGFILA-LGMQFTVESPR 269 (356)
Q Consensus 239 ~~~~w~~~~~~~~~~~~~~~-~~~~~~~e~p~ 269 (356)
..+ ||+.|++.+++.++.. +.++++||+|+
T Consensus 164 ~~g-wr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 164 LKG-WQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred ccc-hhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 235 9999999877766554 45566888874
No 8
>TIGR00898 2A0119 cation transport protein.
Probab=99.91 E-value=1.5e-23 Score=199.32 Aligned_cols=220 Identities=25% Similarity=0.366 Sum_probs=178.4
Q ss_pred hhHHHHHHHhCCC-CChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 018408 108 GPIVSIAKELGFE-GNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFL 186 (356)
Q Consensus 108 ~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 186 (356)
...+.+.+++|++ .+..+.++..+++.+|+.++.++.|+++||+|||++++++.++.+++.++.+++++++.++++|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 4456788899984 126678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHhhcccC
Q 018408 187 VGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVE 266 (356)
Q Consensus 187 ~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e 266 (356)
.|++.++..+....++.|++|+++|+.+.++...+..+|.++++.++..+.+ ||+.+++.+++.++..+..+++||
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~----wr~~~~~~~i~~~~~~~~~~~~~e 265 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD----WRWLQLAVSLPTFLFFLLSWFVPE 265 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999998876643 999999998888887777788999
Q ss_pred ChHHHHhcCCHHHHHHHHHHHcCCcch--HHHHHHHHHHHHhcCCCCccchhhhcccCcchhhHHHH
Q 018408 267 SPRWLCKGGMLNDAKAVIANLWGESEI--NKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGD 331 (356)
Q Consensus 267 ~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 331 (356)
+|+|+..+++.+++.+.+++..+.+.. .++..+.+...++..+.++.++++++++|.++..++..
T Consensus 266 sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 332 (505)
T TIGR00898 266 SPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCL 332 (505)
T ss_pred ChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHH
Confidence 999999999988888877665432211 11111111111111111135788999999888766655
No 9
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.91 E-value=1.8e-22 Score=189.98 Aligned_cols=206 Identities=36% Similarity=0.680 Sum_probs=171.9
Q ss_pred chhHHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCC------CChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHH
Q 018408 83 LPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFE------GNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRT 156 (356)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~ 156 (356)
++.....+++.++.+..+++...+....+.+..+++.+ .+..+.+++.+++.++..++.+++|+++||+|||++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~ 103 (481)
T TIGR00879 24 WKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKS 103 (481)
T ss_pred HHHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHH
Confidence 33444455566666777888888888888888888775 446779999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHhh---hHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhh
Q 018408 157 FQIDTIPLILGAIISAQAH---SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLG 233 (356)
Q Consensus 157 ~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~ 233 (356)
++++.++..++.+++.+.. +++.++++|++.|++.+...+....++.|++|+++|++++++++.+..+|..+++.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 104 LLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred HHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 9999999999988886543 4558899999999999999999999999999999999999999999999999999998
Q ss_pred ---hccCCCCchhHHHHHHhHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHcC
Q 018408 234 ---IPAEDDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWG 289 (356)
Q Consensus 234 ---~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~ 289 (356)
....+..+ ||+.|++.++..++.++..+++||+|++...+++.+++.+..++.++
T Consensus 184 ~~~~~~~~~~~-w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (481)
T TIGR00879 184 SGKVSLNNTLG-WRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRG 241 (481)
T ss_pred HHhhcCCCCcc-HHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhC
Confidence 66656666 99999997777777777778899999887777766666655555443
No 10
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.91 E-value=3.5e-22 Score=188.88 Aligned_cols=184 Identities=20% Similarity=0.257 Sum_probs=152.2
Q ss_pred HHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhH--HHH--HHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHH
Q 018408 87 PHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPIL--EGL--VVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTI 162 (356)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~--~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 162 (356)
+.++...++.++.+|+...++...|.+.++++.+.++.. .+. +.++..+++.+|++++|+++||+|||+++.++.+
T Consensus 16 ~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~ 95 (490)
T PRK10642 16 KAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIV 95 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 456667788999999999999999999999865433321 111 2467788999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHH--------HHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhh
Q 018408 163 PLILGAIISAQAHSLDE--------MLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGI 234 (356)
Q Consensus 163 ~~~i~~~~~~~~~~~~~--------~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~ 234 (356)
+++++++++++++|+.. ++++|+++|++.|+.++....+++|++|+++||+..++...+..+|..+++.+..
T Consensus 96 l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~ 175 (490)
T PRK10642 96 IMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVV 175 (490)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999864 7889999999999999999999999999999999999998888888877775543
Q ss_pred cc----C----CCCchhHHHHHHhHHHHHHHHHHhhcccCChHHH
Q 018408 235 PA----E----DDPHWWRTMLYIASLPGFILALGMQFTVESPRWL 271 (356)
Q Consensus 235 ~l----~----~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~p~~~ 271 (356)
.+ . ...+ ||+.|++.+++.++..++..++||+|++.
T Consensus 176 ~~~~~~~~~~~~~~g-WR~~f~i~~~~~l~~~~~~~~~~esp~~~ 219 (490)
T PRK10642 176 LISTIVGEANFLDWG-WRIPFFIALPLGIIGLYLRHALEETPAFQ 219 (490)
T ss_pred HHHHhcCHHHhcCcc-HHHHHHHHHHHHHHHHHHHHcCCCChhHH
Confidence 32 1 2446 99999998776666666666789998865
No 11
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.91 E-value=2.8e-22 Score=177.97 Aligned_cols=178 Identities=22% Similarity=0.266 Sum_probs=166.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHH
Q 018408 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (356)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 164 (356)
.+..++.+.++.|..+.........+|.+.+++|. +....|++.+.|.++..++.++...+.||+.||++++..+.++
T Consensus 11 ~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~v--s~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lF 88 (394)
T COG2814 11 MWLALLALALAAFAIGTTEFVPVGLLPPIAADLGV--SEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALF 88 (394)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH
Confidence 45567888888899999999999999999999999 5666999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhH
Q 018408 165 ILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWR 244 (356)
Q Consensus 165 ~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~ 244 (356)
+++++++++++|++.++++|++.|+..|..++....+..++.|+++|++++++...+..++..+|.+++.++.+..| ||
T Consensus 89 i~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~G-WR 167 (394)
T COG2814 89 IVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFG-WR 167 (394)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhh-HH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHHHhHHHHHHHHHH-hhccc
Q 018408 245 TMLYIASLPGFILALG-MQFTV 265 (356)
Q Consensus 245 ~~~~~~~~~~~~~~~~-~~~~~ 265 (356)
+.|+..+.+.++..+. +..+|
T Consensus 168 ~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 168 ATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC
Confidence 9999988888877654 45577
No 12
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.91 E-value=1.1e-22 Score=184.59 Aligned_cols=214 Identities=13% Similarity=0.014 Sum_probs=167.4
Q ss_pred hhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHH
Q 018408 103 IGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLW 182 (356)
Q Consensus 103 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 182 (356)
...+.+.+|.+.+++|+ +..+.+++.+.+.+++.+++++.|+++||+|||++++.+......+.+.....+++..+++
T Consensus 7 ~~~~~~~lp~i~~~~~~--s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (368)
T TIGR00903 7 WVTFSPVLSLVAEDIDV--SKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLA 84 (368)
T ss_pred HHHHHhhHHHHHHHhCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 34567788999999999 6777999999999999999999999999999998876555544444333333378999999
Q ss_pred HHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHH-HHh
Q 018408 183 GRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILA-LGM 261 (356)
Q Consensus 183 ~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~-~~~ 261 (356)
+|++.|++.+. .......++|++|+++|++++++.+.+..+|..+++.++..+.++.+ ||+.|++.+++.++.. +..
T Consensus 85 ~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~g-Wr~~f~~~~~l~~~~~~~~~ 162 (368)
T TIGR00903 85 CQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGG-LQLLIIPIAAVAAAGIILVL 162 (368)
T ss_pred HHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-hHHHHHHHHHHHHHHHHHHH
Confidence 99999999986 45556667999999999999999999999999999999999988777 9999999766665554 455
Q ss_pred hcccCChHHHHhcCCHHHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCccchhhhcccCcchhhHHHHHHHHHHHHHH
Q 018408 262 QFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGDGALASLLVGV 341 (356)
Q Consensus 262 ~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 341 (356)
+++||+|++. ++ ..+.+ +. ...+++++++|.+|...+..........++
T Consensus 163 ~~lp~~p~~~---~~-------------~~~~~-------~~--------~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 211 (368)
T TIGR00903 163 AALPALPFQA---AE-------------GFGFK-------DA--------VKEFGALAGRKDLWIIGAILGFGVALFDNL 211 (368)
T ss_pred HHcCCCCCCC---CC-------------CcchH-------HH--------HHHHHHHHcChhHHHHHHHHHHHHHHHHHH
Confidence 6689887431 00 00000 00 013678899999999988888888888888
Q ss_pred HHHHHhhhhh
Q 018408 342 TNFAGLRSEK 351 (356)
Q Consensus 342 ~~~~~~~~~~ 351 (356)
..|+++++..
T Consensus 212 ~~wlp~~L~~ 221 (368)
T TIGR00903 212 AIWLEAALRP 221 (368)
T ss_pred HHHHHHHHHH
Confidence 8888888753
No 13
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.90 E-value=7.9e-22 Score=183.64 Aligned_cols=183 Identities=17% Similarity=0.154 Sum_probs=145.4
Q ss_pred hHHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCC-CChhHHHH---HHHHHHHHHHHHHHhHHhhhhhhchhHHHHHh
Q 018408 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFE-GNPILEGL---VVSIFIAGAFVGSISSGSLADKLGCRRTFQID 160 (356)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~ 160 (356)
+++.+....++.+...++...++...|.+.++++.+ .+..+.+. +.+...++..+|++++|+++||+|||+++.++
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~ 99 (432)
T PRK10406 20 RIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLIS 99 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 444566667788889999999999899999998532 12332333 33444555569999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhHH--------HHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHh
Q 018408 161 TIPLILGAIISAQAHSLD--------EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFL 232 (356)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~--------~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i 232 (356)
.++++++++++++++++. .++++|+++|++.|+.++....+++|++|+++||++.++.+.+..+|.++++.+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~ 179 (432)
T PRK10406 100 VCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLV 179 (432)
T ss_pred HHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999888764 588899999999999999999999999999999999999888888887777765
Q ss_pred hhccC--------CCCchhHHHHHHhHHHHHHHHHHhhcccCCh
Q 018408 233 GIPAE--------DDPHWWRTMLYIASLPGFILALGMQFTVESP 268 (356)
Q Consensus 233 ~~~l~--------~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~p 268 (356)
...+. ...+ ||+.|++.+++.++..+.....||+|
T Consensus 180 ~~~~~~~~~~~~~~~~g-Wr~~F~i~~~~~ll~~~~~~~~~e~~ 222 (432)
T PRK10406 180 VVVLQQTLEDAELREWG-WRIPFALGAVLAVVALWLRRQLDETS 222 (432)
T ss_pred HHHHHHhCCHHHHhccc-hHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 44332 1345 99999998887776655555567765
No 14
>PRK03545 putative arabinose transporter; Provisional
Probab=99.90 E-value=8e-22 Score=181.28 Aligned_cols=180 Identities=19% Similarity=0.211 Sum_probs=153.9
Q ss_pred hHHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHH
Q 018408 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (356)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 164 (356)
++..++.+.++.+..........+.+|.+.+++|. +..+.+++.+.+.+++.++.++.|+++||+|||+++..+.++.
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~--s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 84 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHM--QTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLF 84 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 44445555555555545544555667899999999 6677999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhH
Q 018408 165 ILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWR 244 (356)
Q Consensus 165 ~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~ 244 (356)
+++++++++++|++.++++|+++|++.+...+....++.|++|+++|++++++...+..+|..++|.+++.+.+..+ ||
T Consensus 85 ~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~g-w~ 163 (390)
T PRK03545 85 IASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLG-WR 163 (390)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhc-HH
Confidence 99999999999999999999999999998889999999999999999999999999999999999999998888777 99
Q ss_pred HHHHHhHHHHHHHHHH-hhcccCC
Q 018408 245 TMLYIASLPGFILALG-MQFTVES 267 (356)
Q Consensus 245 ~~~~~~~~~~~~~~~~-~~~~~e~ 267 (356)
+.|++.+++.++..+. ..++||.
T Consensus 164 ~~f~~~~~~~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 164 TTFLAIGGGALITLLLLIKLLPLL 187 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999988776665543 3345654
No 15
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.90 E-value=2.9e-21 Score=178.18 Aligned_cols=186 Identities=17% Similarity=0.256 Sum_probs=165.4
Q ss_pred hhHHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHH
Q 018408 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (356)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 163 (356)
.+++.+..+.++++..+++....+...|.+.+++|. +..+.+++.+++.++..++.++.|+++||+|||++++++.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~ 86 (405)
T TIGR00891 9 AQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGL--TTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVL 86 (405)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 456667788888899999999999999999999999 566699999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCc-h
Q 018408 164 LILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH-W 242 (356)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~-~ 242 (356)
.+++.++++++++++.+++.|++.|++.+...+....++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+ +
T Consensus 87 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 166 (405)
T TIGR00891 87 FSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDG 166 (405)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999888776532 3
Q ss_pred hHHHHHHhHHHHHHHHHHhhcccCChHHH
Q 018408 243 WRTMLYIASLPGFILALGMQFTVESPRWL 271 (356)
Q Consensus 243 w~~~~~~~~~~~~~~~~~~~~~~e~p~~~ 271 (356)
||+.|++.++..++..+....+||++++.
T Consensus 167 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 195 (405)
T TIGR00891 167 WRALFFISILPIIFALWLRKNIPEAEDWK 195 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChhHH
Confidence 99999987777666666666788886543
No 16
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.89 E-value=9.5e-22 Score=183.19 Aligned_cols=181 Identities=15% Similarity=0.121 Sum_probs=157.7
Q ss_pred HHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHH
Q 018408 87 PHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLIL 166 (356)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i 166 (356)
...+...++++...++...++..+|.+.+++|+ +..+.+++.+.+.+++.++.++.|+++||+|||+++.++.++.++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~ 100 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLADLGL--SRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGI 100 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHH
Confidence 444555666666667667778888999999999 667799999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHH
Q 018408 167 GAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTM 246 (356)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~ 246 (356)
+.++++++++++.+++.|++.|++.|...+....++.|++|+++|++++++++.+..+|..+++.+.+.+.+..+ ||+.
T Consensus 101 ~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~g-w~~~ 179 (434)
T PRK11663 101 INILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYG-WRYG 179 (434)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-HHHH
Confidence 999999999999999999999999998889999999999999999999999999999999999999998888777 9999
Q ss_pred HHHhHHHHHHHH-HHhhcccCChHH
Q 018408 247 LYIASLPGFILA-LGMQFTVESPRW 270 (356)
Q Consensus 247 ~~~~~~~~~~~~-~~~~~~~e~p~~ 270 (356)
|++.+++.++.. +..++++|+|+.
T Consensus 180 f~~~~i~~~~~~~~~~~~~~~~p~~ 204 (434)
T PRK11663 180 MMIAGIIAIVVGLFLCWRLRDKPQA 204 (434)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHhh
Confidence 998777665443 344567887643
No 17
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.89 E-value=2.1e-21 Score=180.59 Aligned_cols=180 Identities=18% Similarity=0.275 Sum_probs=157.5
Q ss_pred HHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHH
Q 018408 86 FPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLI 165 (356)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 165 (356)
++.++.+.++++..+++.....+..|.+.+++|. ++.+.+++.+++.+++.++.++.|+++||+|||+++.++.++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~ 94 (426)
T PRK12307 17 KNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGL--TDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYS 94 (426)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 4456677788888888888888889999999999 56668999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHH
Q 018408 166 LGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRT 245 (356)
Q Consensus 166 i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~ 245 (356)
++.++.+++++++.++++|++.|++.+..++....++.|++|+++|++++++...+..+|.++++.+.+.+.+..+ ||+
T Consensus 95 ~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~-w~~ 173 (426)
T PRK12307 95 VGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYG-WRA 173 (426)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCC-HHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999888888777 999
Q ss_pred HHHHhHHHHHHHHHHhhcccCCh
Q 018408 246 MLYIASLPGFILALGMQFTVESP 268 (356)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~e~p 268 (356)
.|++.++..++........||++
T Consensus 174 ~f~i~~~~~~~~~~~~~~~p~~~ 196 (426)
T PRK12307 174 AFFVGLLPVLLVIYIRARAPESK 196 (426)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCh
Confidence 99886554444333333355654
No 18
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.89 E-value=4.5e-21 Score=176.31 Aligned_cols=180 Identities=14% Similarity=0.144 Sum_probs=152.4
Q ss_pred hHHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHH
Q 018408 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (356)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 164 (356)
.|+.++.+.++.+..........+.+|.+.+++|. +..+.++..+.+.++..++.++.|+++||+|||++++.+.++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~ 95 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGI--SEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLL 95 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHH
Confidence 34444555555444444444555567889999999 5667899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhH
Q 018408 165 ILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWR 244 (356)
Q Consensus 165 ~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~ 244 (356)
+++.+++.++++++.++++|++.|++.+...+....++.|++|+++|++++++...+.++|..++|.+++.+.+..+ ||
T Consensus 96 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~g-w~ 174 (394)
T PRK10213 96 TLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIG-WR 174 (394)
T ss_pred HHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-HH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888 99
Q ss_pred HHHHHhHHHHHHHHHHh-hcccCC
Q 018408 245 TMLYIASLPGFILALGM-QFTVES 267 (356)
Q Consensus 245 ~~~~~~~~~~~~~~~~~-~~~~e~ 267 (356)
+.|++.+++.++..+.. ...||+
T Consensus 175 ~~f~~~~~l~~~~~l~~~~~~p~~ 198 (394)
T PRK10213 175 NVFNAAAVMGVLCIFWIIKSLPSL 198 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCC
Confidence 99998776666544333 335654
No 19
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.89 E-value=3.7e-21 Score=182.03 Aligned_cols=182 Identities=12% Similarity=0.103 Sum_probs=161.9
Q ss_pred hhHHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHH
Q 018408 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (356)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 163 (356)
+++..+..++++.+....+..+.+..+|.+.+++|. +..+.+|+.+.+.+++.++.+++|+++||+|||++++++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~--s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~ 80 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGA--SGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTL 80 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 345677888899999999999999999999999998 555689999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhc-CCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCch
Q 018408 164 LILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVA-PTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHW 242 (356)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~ 242 (356)
.+++++++++++|++.++++|+++|++.+...+.....+.+.+ |+++|+++++++.....+|..++|.+++.+.++.+
T Consensus 81 ~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~g- 159 (495)
T PRK14995 81 FGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFY- 159 (495)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-
Confidence 9999999999999999999999999999998888877777776 67899999999999999999999999999999888
Q ss_pred hHHHHHHhHHHHHHHHH-HhhcccCCh
Q 018408 243 WRTMLYIASLPGFILAL-GMQFTVESP 268 (356)
Q Consensus 243 w~~~~~~~~~~~~~~~~-~~~~~~e~p 268 (356)
|||.|++...+.++.++ ..+++|+.+
T Consensus 160 wr~~f~i~~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 160 WGSVFLINVPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999997766665543 445567654
No 20
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.89 E-value=3.3e-21 Score=178.25 Aligned_cols=174 Identities=17% Similarity=0.250 Sum_probs=151.4
Q ss_pred HHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHH
Q 018408 92 ASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIIS 171 (356)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 171 (356)
+.+..+........+.+.+|.+.+++|. +....++..+++.+++.++++++|+++||+|||++++.+.++.+++.+++
T Consensus 21 ~~~~~~~~~~~~~~~~p~l~~i~~~~~~--~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 98 (413)
T PRK15403 21 LILYDFAAYLTTDLIQPGIINVVRDFNA--DVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAAT 98 (413)
T ss_pred HHHHHHHHHHHHHhhccCHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHH
Confidence 3444455566667788888999999998 56668899999999999999999999999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhH
Q 018408 172 AQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIAS 251 (356)
Q Consensus 172 ~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~ 251 (356)
+++++++.++++|+++|++.+...+....++.|++|+++|++.+++...+..+|..++|.+++.+.++.+ ||+.|++.+
T Consensus 99 ~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~g-w~~~f~~~~ 177 (413)
T PRK15403 99 LFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVH-WKVLFAIIA 177 (413)
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-HHHHHHHHH
Confidence 9999999999999999999887777778889999999999999999999999999999999998887777 999999988
Q ss_pred HHHHHHHHH-hhcccCCh
Q 018408 252 LPGFILALG-MQFTVESP 268 (356)
Q Consensus 252 ~~~~~~~~~-~~~~~e~p 268 (356)
+..++..+. .+++||++
T Consensus 178 ~~~~i~~~~~~~~lp~~~ 195 (413)
T PRK15403 178 VMGLIAFVGLLLAMPETV 195 (413)
T ss_pred HHHHHHHHHHHHhCCCCc
Confidence 777766554 44578764
No 21
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.88 E-value=1e-21 Score=187.29 Aligned_cols=206 Identities=23% Similarity=0.256 Sum_probs=168.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHH
Q 018408 122 NPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIY 201 (356)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~ 201 (356)
+.....+..+++.+|..+|++++|+++||+|||+++++++++..++.++.++++|++.+++.|++.|++.++.......+
T Consensus 116 ~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~ 195 (521)
T KOG0255|consen 116 SSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGL 195 (521)
T ss_pred cHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhh
Confidence 55567888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHhhcccCChHHHHhcCCHHHHH
Q 018408 202 ISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAK 281 (356)
Q Consensus 202 ~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~ 281 (356)
+.|++++++|+.++.+ ......++.+++.+++++.. + ||+.+++..++.++.++.+++.||+|+|+..+++.+++.
T Consensus 196 ~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~-Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~a~ 271 (521)
T KOG0255|consen 196 VAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--D-WRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDEAI 271 (521)
T ss_pred heeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--h-HHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCchHHHH
Confidence 9999999999999999 77777777777777777766 4 999999999999888877777779999999999999999
Q ss_pred HHHHHHcCCc----chHHHHHHH-HHHHHh-cCCCCccchhhhcccCcchhhHHHH
Q 018408 282 AVIANLWGES----EINKAIEEF-QLVIKK-DGSDLDSQWSELLEEPHSRVAFIGD 331 (356)
Q Consensus 282 ~~~~~~~~~~----~~~~~~~~~-~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~ 331 (356)
+.+++....+ +.++..+.. .....+ ...+.+..+.++++.|+++..++..
T Consensus 272 ~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~ 327 (521)
T KOG0255|consen 272 KILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYL 327 (521)
T ss_pred HHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHH
Confidence 9988864321 222222211 111111 1122236799999999655544444
No 22
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.88 E-value=6.2e-26 Score=212.57 Aligned_cols=231 Identities=34% Similarity=0.600 Sum_probs=185.4
Q ss_pred HHHHHHHHHhhhhcchhhHHHHH--HHhCCCC-------ChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHH
Q 018408 92 ASMSNFLFGYHIGVMNGPIVSIA--KELGFEG-------NPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTI 162 (356)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~-------~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 162 (356)
+.++.+..+|+...++...+... ..++.+. ++...++..+...+|..+|++++|+++||+|||+.++++.+
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~ 84 (451)
T PF00083_consen 5 ASLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISAL 84 (451)
T ss_pred eHHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccc
Confidence 45556788888877766654433 2222221 12356889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhh---hHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCC
Q 018408 163 PLILGAIISAQAH---SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD 239 (356)
Q Consensus 163 ~~~i~~~~~~~~~---~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 239 (356)
+..++.++.++++ ++..++++|++.|++.|+..+....++.|..|+++|++..++.+.+..+|.+++..++..+...
T Consensus 85 ~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 164 (451)
T PF00083_consen 85 LMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYY 164 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999 9999999999999999999999999999999999999999999999999999888876655322
Q ss_pred C--chhHHHHHHhHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCccchhh
Q 018408 240 P--HWWRTMLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSE 317 (356)
Q Consensus 240 ~--~~w~~~~~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (356)
. ..||..+++.+++.++..+..+++||||+|+..+++.+||++.++++++++..+++.++..++.++.++. +.++++
T Consensus 165 ~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 243 (451)
T PF00083_consen 165 SDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQES-KASWRD 243 (451)
T ss_pred cccccccccccccccccccccccccccccccceeccccccccccccccccccccccccccccccccccccccc-ceeeee
Confidence 1 2399999999999888888888899999999999999999999999777654444443333333322222 267888
Q ss_pred hcccCc
Q 018408 318 LLEEPH 323 (356)
Q Consensus 318 ~l~~~~ 323 (356)
+++++.
T Consensus 244 l~~~~~ 249 (451)
T PF00083_consen 244 LFRNKK 249 (451)
T ss_pred cccccc
Confidence 888865
No 23
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.88 E-value=8.8e-21 Score=178.46 Aligned_cols=176 Identities=14% Similarity=0.106 Sum_probs=138.8
Q ss_pred HHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHH
Q 018408 87 PHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLIL 166 (356)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i 166 (356)
+.+...++..+...+......+..|.+.+++|+ +..+.+++.+.+.+++.++.++.|+++||+|||+++..+.++.++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl--s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~ 113 (476)
T PLN00028 36 RAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNL--TKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAP 113 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 334444455555555555667778899999999 566688999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccC----C----
Q 018408 167 GAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAE----D---- 238 (356)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~----~---- 238 (356)
+.++.++++++..++++|++.|++.+... ....+++|++|+++||+++++.+.+..+|..+++.+.+.+. +
T Consensus 114 ~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 192 (476)
T PLN00028 114 AVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAP 192 (476)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999887654 45567899999999999999987776667666655443321 1
Q ss_pred -CCchhHHHHHHhHHHHHHHHHHhhcccC
Q 018408 239 -DPHWWRTMLYIASLPGFILALGMQFTVE 266 (356)
Q Consensus 239 -~~~~w~~~~~~~~~~~~~~~~~~~~~~e 266 (356)
..+ ||+.|++.+++.++..+..+++++
T Consensus 193 ~~~g-Wr~~f~i~g~l~l~~~l~~~~~~~ 220 (476)
T PLN00028 193 SFTA-WRIAFFVPGLLHIIMGILVLTLGQ 220 (476)
T ss_pred chhh-hHHHHHHHHHHHHHHHHHHHHHcC
Confidence 135 999999988877766655555443
No 24
>TIGR00895 2A0115 benzoate transport.
Probab=99.88 E-value=2.2e-21 Score=178.37 Aligned_cols=186 Identities=26% Similarity=0.423 Sum_probs=160.0
Q ss_pred HHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHH
Q 018408 86 FPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLI 165 (356)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 165 (356)
++.+..+.+..+..++.........|.+.+++|. +..+.+++.+.+.++..++.++.|+++||+|||+.+..+.++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 93 (398)
T TIGR00895 16 WRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGL--DPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFS 93 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCC--CHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHH
Confidence 4445555566677777777777888999999998 56678999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHH
Q 018408 166 LGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRT 245 (356)
Q Consensus 166 i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~ 245 (356)
++.++..+.++++.+++.+++.|++.+...+....++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+ |++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g-~~~ 172 (398)
T TIGR00895 94 VFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFG-WRS 172 (398)
T ss_pred HHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhccc-cee
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999888877 999
Q ss_pred HHHHhHHHHHH-HHHHhhcccCChHHHHhc
Q 018408 246 MLYIASLPGFI-LALGMQFTVESPRWLCKG 274 (356)
Q Consensus 246 ~~~~~~~~~~~-~~~~~~~~~e~p~~~~~~ 274 (356)
.+++.++..++ ..+...++||++++..++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (398)
T TIGR00895 173 LFYVGGIAPLLLLLLLMRFLPESIDFLVSK 202 (398)
T ss_pred ehhhhhhHHHHHHHHHHHhCCCCChHHHhc
Confidence 99887544444 445556688887665443
No 25
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.88 E-value=2.2e-23 Score=184.62 Aligned_cols=183 Identities=18% Similarity=0.241 Sum_probs=167.1
Q ss_pred chhHHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHH
Q 018408 83 LPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTI 162 (356)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 162 (356)
....+.+.++++...+...+.+.+....+.+++.+|++ +...|++.+.+.+++.++++++|+++||++||+++.+|..
T Consensus 29 ~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~--~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~ 106 (493)
T KOG1330|consen 29 KSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNIS--DSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIF 106 (493)
T ss_pred ccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCC--chhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHH
Confidence 34456677788888888899888888899999999995 4459999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCch
Q 018408 163 PLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHW 242 (356)
Q Consensus 163 ~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~ 242 (356)
++.++.+..+++..+++++++|.+.|+|.+.+.+..+.+++|.+|..+|++.+++++++..+|..+|.+++..+.+..++
T Consensus 107 iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~ 186 (493)
T KOG1330|consen 107 IWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFW 186 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred hHHHHHHhHHHHHHHHHHhhc-ccCC
Q 018408 243 WRTMLYIASLPGFILALGMQF-TVES 267 (356)
Q Consensus 243 w~~~~~~~~~~~~~~~~~~~~-~~e~ 267 (356)
|||.|+..+++.++..++.++ .+|.
T Consensus 187 Wr~af~~~avl~vi~~~L~~~f~~eP 212 (493)
T KOG1330|consen 187 WRWAFRGSAVLGVIVGLLVFLFVREP 212 (493)
T ss_pred eEEEEEeehHHHHHHHHHHHhhccCc
Confidence 999999999988887766544 5554
No 26
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.88 E-value=2.3e-21 Score=177.77 Aligned_cols=168 Identities=19% Similarity=0.174 Sum_probs=148.9
Q ss_pred HHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhH
Q 018408 98 LFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSL 177 (356)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~ 177 (356)
...++...++...|.+.+++|. +..+.+++.+++.++..++.++.|+++||+|||+++.++.++.+++.+++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 82 (399)
T TIGR00893 5 INYLDRANLSFAAPMLQEDLGL--SAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAY 82 (399)
T ss_pred HHHHHHHhhhHhHHHHHHhhCC--ChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCH
Confidence 3445556677778899999999 56669999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHH
Q 018408 178 DEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFIL 257 (356)
Q Consensus 178 ~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~ 257 (356)
+.++++|++.|++.+...+....++.|++|+++|++++++.+....+|..+++.+++.+.+..+ |++.|++.++..++.
T Consensus 83 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~ 161 (399)
T TIGR00893 83 VSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFS-WQWAFIIEGVLGIIW 161 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCC-chHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998888877 999999887776665
Q ss_pred HHHh-hcccCCh
Q 018408 258 ALGM-QFTVESP 268 (356)
Q Consensus 258 ~~~~-~~~~e~p 268 (356)
.+.. ++.||+|
T Consensus 162 ~~~~~~~~~~~~ 173 (399)
T TIGR00893 162 GVLWLKFIPDPP 173 (399)
T ss_pred HHHhhheecCCC
Confidence 5443 4456654
No 27
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.87 E-value=1.2e-20 Score=162.07 Aligned_cols=199 Identities=19% Similarity=0.221 Sum_probs=176.0
Q ss_pred HHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHH
Q 018408 86 FPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLI 165 (356)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 165 (356)
+.....+.++++...+.....+...|.+.+.+|. +..+..+++...+.|+.+++..+|.++|++|||+.+.+.....+
T Consensus 77 ~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~--s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~ 154 (528)
T KOG0253|consen 77 WYLFFVAGMGWMADAMEMMLLSLILPALDEVWGP--SEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTG 154 (528)
T ss_pred hhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhch--hhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHH
Confidence 4455666777777766666666677888888887 66778999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHH
Q 018408 166 LGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRT 245 (356)
Q Consensus 166 i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~ 245 (356)
+..++.+.++|+..+.+.|.+.|+|.|+ .+...++-.|..|..+|+..+-+. ..+.+|.++...++.....+.| |||
T Consensus 155 v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~g-wr~ 231 (528)
T KOG0253|consen 155 VFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFG-WRY 231 (528)
T ss_pred HHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhh-HHH
Confidence 9999999999999999999999999999 788888889999999999888777 8999999999999988888888 999
Q ss_pred HHHHhHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHcC
Q 018408 246 MLYIASLPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWG 289 (356)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~ 289 (356)
.......+..+.++..+++||+||++..+++.++|.+.++++..
T Consensus 232 ~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiAr 275 (528)
T KOG0253|consen 232 LLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIAR 275 (528)
T ss_pred HHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHH
Confidence 98888888888888888999999999999999999998887654
No 28
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.87 E-value=5.8e-20 Score=169.84 Aligned_cols=184 Identities=23% Similarity=0.356 Sum_probs=163.0
Q ss_pred hhHHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHH
Q 018408 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (356)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 163 (356)
+++..++++.+..+..+++....+...|.+.+++|. ++.+.+++.+.+.++..++.++.|+++||+|||+++..+.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 89 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGL--DVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVAL 89 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 455667777788888899998899999999999998 677799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchh
Q 018408 164 LILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (356)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w 243 (356)
..++.+++.++++++.+++.|++.|++.+...+....++.|++|+++|++++++.+.+..+|..+++.++..+.+..+ |
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~ 168 (406)
T PRK11551 90 FGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAA-W 168 (406)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccC-H
Confidence 999999999999999999999999999999999999999999999999999999999999999999999888877777 9
Q ss_pred HHHHHHhHHHHHHHHH-HhhcccCChHH
Q 018408 244 RTMLYIASLPGFILAL-GMQFTVESPRW 270 (356)
Q Consensus 244 ~~~~~~~~~~~~~~~~-~~~~~~e~p~~ 270 (356)
++.|++.++..++..+ ...++||+|++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 196 (406)
T PRK11551 169 RHIFYVGGVGPLLLVPLLMRWLPESRAF 196 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChhH
Confidence 9999987766555443 44567888754
No 29
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.87 E-value=3.9e-21 Score=180.73 Aligned_cols=180 Identities=15% Similarity=0.099 Sum_probs=149.1
Q ss_pred HHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHH
Q 018408 88 HVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (356)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~ 167 (356)
.+..+.++++....+...++...|.+.+++|+ +..+.|++.+.+.+++.+++++.|+++||+|||+++.++.++++++
T Consensus 30 i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 107 (467)
T PRK09556 30 SYLVVFIGYLTMYLIRKNFKAAQNDMISTYGL--STTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAIC 107 (467)
T ss_pred HHHHHHHHHHHHHHHhcChhhhhHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHH
Confidence 34455666666666788888889999999999 5677999999999999999999999999999999999888888877
Q ss_pred HHHHHH-----hhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCC--
Q 018408 168 AIISAQ-----AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP-- 240 (356)
Q Consensus 168 ~~~~~~-----~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~-- 240 (356)
.++.++ +++++.++++|++.|++.+...+....+++|++|+++||+++|+++.+..+|.++++.+...+....
T Consensus 108 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~ 187 (467)
T PRK09556 108 MLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFD 187 (467)
T ss_pred HHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhcc
Confidence 776654 5899999999999999999999999999999999999999999999999999999998876554432
Q ss_pred chhHHHHHHhHHHHHHHHH-HhhcccCChH
Q 018408 241 HWWRTMLYIASLPGFILAL-GMQFTVESPR 269 (356)
Q Consensus 241 ~~w~~~~~~~~~~~~~~~~-~~~~~~e~p~ 269 (356)
++|+..|.+.+++.++..+ .+++.++.|+
T Consensus 188 ~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~ 217 (467)
T PRK09556 188 GHVIGMFIFPSIIALIIGFIGLRYGSDSPE 217 (467)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHhCCCChh
Confidence 2389888887766655544 3444566653
No 30
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.87 E-value=4.2e-20 Score=174.73 Aligned_cols=178 Identities=21% Similarity=0.288 Sum_probs=158.8
Q ss_pred HHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHH
Q 018408 88 HVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (356)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~ 167 (356)
.+..++++.+...++....+..+|.+.+++|. +..+.+++.+.+.++..++.++.|+++||+|||++++++.++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 80 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGS--SLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLG 80 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--ChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 34566677788888888889999999999998 4556899999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHH
Q 018408 168 AIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTML 247 (356)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~ 247 (356)
.+++++++++..++++|+++|++.+...+....++.|++|+++|+++++++..+..+|..++|.+++.+.++.+ ||+.|
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-w~~~f 159 (485)
T TIGR00711 81 SLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYH-WRWIF 159 (485)
T ss_pred HHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcC-ceehh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888 99999
Q ss_pred HHhHHHHHHHHHH-hhcccCCh
Q 018408 248 YIASLPGFILALG-MQFTVESP 268 (356)
Q Consensus 248 ~~~~~~~~~~~~~-~~~~~e~p 268 (356)
++.+++.++..+. .++.||++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~ 181 (485)
T TIGR00711 160 LINVPIGIIVVVVAFFILPRDK 181 (485)
T ss_pred hhhhHHHHHHHHHHHHHcCCcc
Confidence 9887766655543 34466643
No 31
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.87 E-value=1.8e-21 Score=177.73 Aligned_cols=170 Identities=15% Similarity=0.105 Sum_probs=147.6
Q ss_pred HHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhh
Q 018408 96 NFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH 175 (356)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~ 175 (356)
++...++...++...|.+.+++|. +..+.+++.+++.+++.++.++.|+++||+|||+++.++.++.+++.++.++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 81 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPYLVEEIGL--SKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST 81 (379)
T ss_pred hhHHHHhHHhhhhhhHHHHHHhCC--CHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh
Confidence 445556667777888999999999 566699999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHH-HhhhccCCCCchhHHHHHHhHHHH
Q 018408 176 SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSL-FLGIPAEDDPHWWRTMLYIASLPG 254 (356)
Q Consensus 176 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~-~i~~~l~~~~~~w~~~~~~~~~~~ 254 (356)
+++.+++.|++.|++.+...+....++.|++|+++|++++++.+.+..+|..+++ .++..+.+..+ |++.|++.+++.
T Consensus 82 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 160 (379)
T TIGR00881 82 SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYS-WHWVFIVPGIIA 160 (379)
T ss_pred hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCC-chhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 46666666666 999998877666
Q ss_pred HHHH-HHhhcccCCh
Q 018408 255 FILA-LGMQFTVESP 268 (356)
Q Consensus 255 ~~~~-~~~~~~~e~p 268 (356)
++.. +..++.+|+|
T Consensus 161 ~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 161 IIVSLICFLLLRDSP 175 (379)
T ss_pred HHHHHHHheeeCCCc
Confidence 5543 4455567665
No 32
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.87 E-value=6.5e-21 Score=179.28 Aligned_cols=245 Identities=14% Similarity=0.113 Sum_probs=177.7
Q ss_pred hhHHHHHHHHHHHHHHHhhhhcchhhHHHHHH----------------------HhCCCCChhHHHHHHHHHHHHHHHHH
Q 018408 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAK----------------------ELGFEGNPILEGLVVSIFIAGAFVGS 141 (356)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~g~~~~~~~~~~~~~~~~~~~~~~~ 141 (356)
.++....++.++......+....+...+.+.+ ++++ +..+.|++.+.+.+++.+++
T Consensus 16 ~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~g~~~s~~~~~~~~~~ 93 (465)
T TIGR00894 16 FRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKW--SGALQGLILSSHFYGQIIIQ 93 (465)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCC--CHHHhhHHHHHHHHHHHHHH
Confidence 34555555666666556666666555555544 5666 66779999999999999999
Q ss_pred HhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHh--hhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhH
Q 018408 142 ISSGSLADKLGCRRTFQIDTIPLILGAIISAQA--HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQ 219 (356)
Q Consensus 142 ~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~ 219 (356)
++.|+++||+|||+++.++.++.+++.+++.++ .++..+++.|+++|++.+...+....+++|++|+++|++++++..
T Consensus 94 ~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 173 (465)
T TIGR00894 94 IPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMST 173 (465)
T ss_pred cchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 999999999999999999999999988877544 457889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccCCCC-chhHHHHHHhHHHHHHHHHHhhc-ccCChHHHHhcCCHHHHHHHHHHHcCCcchHHHH
Q 018408 220 VGTCLGIITSLFLGIPAEDDP-HWWRTMLYIASLPGFILALGMQF-TVESPRWLCKGGMLNDAKAVIANLWGESEINKAI 297 (356)
Q Consensus 220 ~~~~~g~~~~~~i~~~l~~~~-~~w~~~~~~~~~~~~~~~~~~~~-~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (356)
.+..+|.++++.+++.+.+.. + |++.|++.+++.++..+.+++ .+|+|+... +.+.+| .
T Consensus 174 ~~~~~g~~i~~~l~~~l~~~~~g-w~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~-----------------~ 234 (465)
T TIGR00894 174 SGFQLGTFIFLPISGWLCESWGG-WPMIFYVFGIVGCAWSLLWFVFPADDPSIHP-CISKFE-----------------K 234 (465)
T ss_pred HHHHHHHHHHHHHHHHHHhccCC-CCeehhhhhHHHHHHHHHHHHHhcCCcccCC-CCCHHH-----------------H
Confidence 999999999999999988774 6 999999988877766555444 556653210 000000 0
Q ss_pred HHHHHHHHhc--CCCCccchhhhcccCcchhhHHHHHHHHHHHHHHHHHHHhhh
Q 018408 298 EEFQLVIKKD--GSDLDSQWSELLEEPHSRVAFIGDGALASLLVGVTNFAGLRS 349 (356)
Q Consensus 298 ~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (356)
+..++..+++ ..+....++++++++.+|...+..............+++.++
T Consensus 235 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l 288 (465)
T TIGR00894 235 KYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFI 288 (465)
T ss_pred HHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111110110 111124688899999998887776444444444444554444
No 33
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.86 E-value=3.4e-20 Score=169.96 Aligned_cols=177 Identities=17% Similarity=0.246 Sum_probs=153.5
Q ss_pred HHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHH
Q 018408 88 HVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (356)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~ 167 (356)
..+.+.+..+........+.+..|.+.+++|. +..+.+++.+.+.++..++.++.|+++||+|||+++..+.++.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 83 (385)
T TIGR00710 6 FALLLGCLSILGPLGIDMYLPAFPEIAADLST--PASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALS 83 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHH
Confidence 33444444555666777777888999999999 5666999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHH
Q 018408 168 AIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTML 247 (356)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~ 247 (356)
.++..++++++.+++.|++.|++.+...+....++.|++|+++|++.+++.+....+|..+++.+++.+.+..+ |++.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-~~~~~ 162 (385)
T TIGR00710 84 SLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLS-WHAIF 162 (385)
T ss_pred HHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888777 99999
Q ss_pred HHhHHHHHHHHHH-hhcccCC
Q 018408 248 YIASLPGFILALG-MQFTVES 267 (356)
Q Consensus 248 ~~~~~~~~~~~~~-~~~~~e~ 267 (356)
++.++..++..+. .++.||+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~ 183 (385)
T TIGR00710 163 AFLSLAGILLSALIFFILPET 183 (385)
T ss_pred HHHHHHHHHHHHHHHHhCCCC
Confidence 9877766655544 3446665
No 34
>PRK09952 shikimate transporter; Provisional
Probab=99.86 E-value=8.6e-20 Score=170.14 Aligned_cols=182 Identities=16% Similarity=0.133 Sum_probs=145.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhcchhhHHH-HHHHh--CCCCChhHHHHHH-----HHHHHHHHHHHHhHHhhhhhhchhHH
Q 018408 85 AFPHVLIASMSNFLFGYHIGVMNGPIVS-IAKEL--GFEGNPILEGLVV-----SIFIAGAFVGSISSGSLADKLGCRRT 156 (356)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--g~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~l~dr~Grr~~ 156 (356)
+++.+....++.+..+++...++...|. +.+++ +.+ +. .+++. ++..++..+++++.|+++||+|||++
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~ 96 (438)
T PRK09952 20 ARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVS--PA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRM 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC--cH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHH
Confidence 3455667777888999999888877764 45555 453 33 34443 24456677899999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHhhhHH--------HHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHH
Q 018408 157 FQIDTIPLILGAIISAQAHSLD--------EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIIT 228 (356)
Q Consensus 157 ~~~~~~~~~i~~~~~~~~~~~~--------~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 228 (356)
+.++.++++++++++++++++. .++++|+++|++.|+.++....++.|++|+++|++..+..+.+..+|..+
T Consensus 97 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l 176 (438)
T PRK09952 97 LMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLL 176 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 9999999999999999999876 58889999999999999999999999999999999999999999999988
Q ss_pred HHHhhhccC--------CCCchhHHHHHHhHHHHHHHHHHhhcccCChHH
Q 018408 229 SLFLGIPAE--------DDPHWWRTMLYIASLPGFILALGMQFTVESPRW 270 (356)
Q Consensus 229 ~~~i~~~l~--------~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~p~~ 270 (356)
+..+...+. ...+ ||+.|++.+++.++........||+|++
T Consensus 177 ~~~~~~~l~~~~~~~~~~~~g-Wr~~f~~~~~~~l~~~~l~~~~~es~~~ 225 (438)
T PRK09952 177 STGLVSLISMMTTDEQFLSWG-WRIPFLFSIVLVLIALWVRNGMEESAEF 225 (438)
T ss_pred HHHHHHHHHHhCCHHHhhccC-hHHHHHHHHHHHHHHHHHHHhCCCChhH
Confidence 877655443 2345 9999999887766555544557888754
No 35
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.86 E-value=6.9e-20 Score=169.35 Aligned_cols=181 Identities=16% Similarity=0.182 Sum_probs=154.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHH
Q 018408 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (356)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 164 (356)
.+.....+.+..+...+....+.+.+|.+.+++|. +..+.++..+.+.+++.++.++.|+++||+|||++++++.++.
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 88 (406)
T PRK15402 11 ALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNA--GAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFF 88 (406)
T ss_pred HHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 33445555666666666777777888899999998 5667899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhH
Q 018408 165 ILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWR 244 (356)
Q Consensus 165 ~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~ 244 (356)
+++.++..++++++.+++.|++.|++.+...+....++.|.+|+++|++.+++......+|..++|.+++.+.++.+ |+
T Consensus 89 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~-w~ 167 (406)
T PRK15402 89 ILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLP-WR 167 (406)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-cc
Confidence 99999999999999999999999999998888889999999999999999999888888899999999998888777 99
Q ss_pred HHHHHhHHHHHHHHHH-hhcccCCh
Q 018408 245 TMLYIASLPGFILALG-MQFTVESP 268 (356)
Q Consensus 245 ~~~~~~~~~~~~~~~~-~~~~~e~p 268 (356)
+.|++.++..++..+. .++.||++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 168 GMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999877776665543 34467653
No 36
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.86 E-value=9.6e-21 Score=171.28 Aligned_cols=172 Identities=28% Similarity=0.415 Sum_probs=147.5
Q ss_pred HHHHHHHHhhhhcchhhHH-HHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHH
Q 018408 93 SMSNFLFGYHIGVMNGPIV-SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIIS 171 (356)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 171 (356)
.++.+...+......+..| .+.+++|. +..+.+++.+++.++..++.++.|+++||+|||+++.++.++.+++.++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~ 79 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGL--SPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLL 79 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTT--TSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHh
Confidence 3455666666677778888 88899998 55669999999999999999999999999999999999999999996666
Q ss_pred HHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhH
Q 018408 172 AQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIAS 251 (356)
Q Consensus 172 ~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~ 251 (356)
.++++.+.++++|++.|++.+...+....++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+ |++.|++.+
T Consensus 80 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~-~~~~~~~~~ 158 (352)
T PF07690_consen 80 AFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFG-WRWAFLISA 158 (352)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH-HCCHHHHHH
T ss_pred hhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccc-ccccccccc
Confidence 6667878999999999999999999999999999999999999999999999999999999999997777 999999988
Q ss_pred HHHHHHHHH-hhcccCC
Q 018408 252 LPGFILALG-MQFTVES 267 (356)
Q Consensus 252 ~~~~~~~~~-~~~~~e~ 267 (356)
++.++..++ ..+++++
T Consensus 159 ~~~~~~~il~~~~~~~~ 175 (352)
T PF07690_consen 159 ILSLIAAILFILFLPEP 175 (352)
T ss_dssp HHHHHHHHHHHCCC---
T ss_pred chhhhhhhhHhhhhhhc
Confidence 888877654 3445444
No 37
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.86 E-value=1.1e-19 Score=167.16 Aligned_cols=152 Identities=14% Similarity=0.141 Sum_probs=136.4
Q ss_pred hcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHH
Q 018408 104 GVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWG 183 (356)
Q Consensus 104 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 183 (356)
...++.+|.+.+++|+ +..+.+++.+.+.+++.+++++.|+++||+|||+++..+..+.+++.+++++++++..++++
T Consensus 26 ~~~~~~lp~i~~~~~~--s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~ 103 (393)
T PRK09705 26 TSVGPLLPQLRQASGM--SFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSS 103 (393)
T ss_pred hccchhHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHH
Confidence 5677889999999999 66779999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHH
Q 018408 184 RFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILA 258 (356)
Q Consensus 184 ~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~ 258 (356)
|++.|++.+...+....++.+++| ++|+++++++..+..+|..+++.+++.+.++..+||+.+.+.++..++..
T Consensus 104 r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~ 177 (393)
T PRK09705 104 ALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVAL 177 (393)
T ss_pred HHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999997 77999999999999999999999988887775349998876655544433
No 38
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.86 E-value=9.2e-20 Score=167.10 Aligned_cols=176 Identities=14% Similarity=0.184 Sum_probs=154.8
Q ss_pred HHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHH
Q 018408 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (356)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 168 (356)
++...+..+..+.......+.+|.+.+++|. +..+.+++.+.+.+++.+++++.|+++||+|||+++.++.++.+++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~--s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 82 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVGI--SIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGN 82 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcCC--CHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHH
Confidence 4555666677777777778888999999999 56669999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHH
Q 018408 169 IISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLY 248 (356)
Q Consensus 169 ~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~ 248 (356)
++++++++++.+++.|++.|++.+...+....++.|++|+++|+++++++..+..+|..+++.+++.+.+..+ ||+.|+
T Consensus 83 ~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-wr~~f~ 161 (382)
T PRK10091 83 AMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFS-WRYTFL 161 (382)
T ss_pred HHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhcc-HHHHHH
Confidence 9999999999999999999999999888888899999999999999999999999999999999998888777 999999
Q ss_pred HhHHHHHHHHH-HhhcccCC
Q 018408 249 IASLPGFILAL-GMQFTVES 267 (356)
Q Consensus 249 ~~~~~~~~~~~-~~~~~~e~ 267 (356)
+.++..++..+ ..+++||.
T Consensus 162 ~~~~~~~~~~~~~~~~lp~~ 181 (382)
T PRK10091 162 LIAVFNIAVLASIYFWVPDI 181 (382)
T ss_pred HHHHHHHHHHHHHHHhCCCC
Confidence 98776665544 34456765
No 39
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.85 E-value=6.7e-20 Score=166.96 Aligned_cols=174 Identities=21% Similarity=0.175 Sum_probs=136.1
Q ss_pred HHHHHHHHHHhhhhcchhhHHH-HHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHH
Q 018408 91 IASMSNFLFGYHIGVMNGPIVS-IAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAI 169 (356)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 169 (356)
..+++.+........+.+..|. +.+++|+ +..+.+++.+++.+++.++.++.|+++||+|||+.++++.++.+++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~ 82 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDLGL--STAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCL 82 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHhCC--CHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 3445555555555667778884 8899999 666799999999999999999999999999999999999999999999
Q ss_pred HHHHhh-hHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCC----------
Q 018408 170 ISAQAH-SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED---------- 238 (356)
Q Consensus 170 ~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~---------- 238 (356)
++++++ +++.+++.|++.|++.+. ......+++|++|+++|++++++...+..+|..+++.+++.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~ 161 (366)
T TIGR00886 83 WAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPA 161 (366)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 999999 999999999999998654 46677899999999999999999887666776666666544332
Q ss_pred CCchhHHHHHH-hHHHHH-HHHHHhhcccCCh
Q 018408 239 DPHWWRTMLYI-ASLPGF-ILALGMQFTVESP 268 (356)
Q Consensus 239 ~~~~w~~~~~~-~~~~~~-~~~~~~~~~~e~p 268 (356)
+.+ ||+.|++ .++..+ +..+...+.+|+|
T Consensus 162 ~~~-w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (366)
T TIGR00886 162 HLA-WGWAFVIVPAGILLLPALLIFFVGADTP 192 (366)
T ss_pred ccc-ccchhHHHHHHHHHHHHHHHHHhcccCC
Confidence 224 9999844 344333 3334445566654
No 40
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.85 E-value=6.6e-21 Score=183.90 Aligned_cols=250 Identities=15% Similarity=0.102 Sum_probs=175.7
Q ss_pred HHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHH
Q 018408 90 LIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAI 169 (356)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 169 (356)
+...+..+......+..+..++.+.++|++ +..+.|++.+.+.+++.++.++.+++.||+|||+++.++.++++++++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~l--ss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~l 113 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKL--STSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSF 113 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCC--CCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHH
Confidence 334445566666667788888999999999 455599999999999999999999999999999999999999999999
Q ss_pred HHHHhh---------------------------------------------------hHHHHHHHHHHHHhhhhhhhhHH
Q 018408 170 ISAQAH---------------------------------------------------SLDEMLWGRFLVGLGIGVNTVLV 198 (356)
Q Consensus 170 ~~~~~~---------------------------------------------------~~~~~~~~~~l~G~~~g~~~~~~ 198 (356)
++++.+ .+..++++|+++|++.+..++..
T Consensus 114 l~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~ 193 (633)
T TIGR00805 114 LLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLG 193 (633)
T ss_pred HHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcC
Confidence 887653 24567789999999999999999
Q ss_pred HHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCC---------------------chhHHHHHHhHHHHHHH
Q 018408 199 PIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP---------------------HWWRTMLYIASLPGFIL 257 (356)
Q Consensus 199 ~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~---------------------~~w~~~~~~~~~~~~~~ 257 (356)
.+++.|++|+++|++++++++.+..+|.++++++++++.+.. |+|+..|++.+++.++.
T Consensus 194 ~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~ 273 (633)
T TIGR00805 194 ISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLT 273 (633)
T ss_pred chhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988776432 23777788877777776
Q ss_pred HHHhhcccCChHHHHhcCCHHHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCccchhhhcccCcchhhHHHHHHHHHH
Q 018408 258 ALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGDGALASL 337 (356)
Q Consensus 258 ~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 337 (356)
.+.++++|++.+....+.+.++.++ ...++.+.+. ..+ ..+..++....++.++++|.++...+........
T Consensus 274 ~v~l~~~p~~lp~~~~~~~~~~~~~---~~~~~~~~~~-~~~----~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~ 345 (633)
T TIGR00805 274 SIPFFFFPKALPKEGKRVNVDVHET---EKLEKSEDKS-RKK----NSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLA 345 (633)
T ss_pred HHHHHhCccccCCcccccchhhhhh---hccccccccc-chh----hhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 6666667764210000000000000 0000000000 000 0000011124577899999998888877555555
Q ss_pred HHHHHHHHHhhh
Q 018408 338 LVGVTNFAGLRS 349 (356)
Q Consensus 338 ~~~~~~~~~~~~ 349 (356)
..+...+++.++
T Consensus 346 ~~~~~~~lP~yl 357 (633)
T TIGR00805 346 FNGYITFLPKYL 357 (633)
T ss_pred HHHHHHHHHHHH
Confidence 555555555444
No 41
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.85 E-value=4.4e-20 Score=167.72 Aligned_cols=168 Identities=10% Similarity=-0.037 Sum_probs=146.3
Q ss_pred HHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHH
Q 018408 93 SMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISA 172 (356)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~ 172 (356)
..+.+...+........+|.+..+++. +..+.+++.+++.++..++.++.|+++||+|||++++.+.++.+++.++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~ 82 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYVLAGTG--SASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLP 82 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc--cHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHH
Confidence 344555556666677778888888887 677799999999999999999999999999999999999999888888888
Q ss_pred Hhh-----hHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHH
Q 018408 173 QAH-----SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTML 247 (356)
Q Consensus 173 ~~~-----~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~ 247 (356)
+.. +++.+++.|++.|++.+...+...+++.|++|+++|++.+++.+.+..+|..+++.+++.+.+..+ |++.|
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-~~~~~ 161 (365)
T TIGR00900 83 FVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLG-IKWAI 161 (365)
T ss_pred HHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHH
Confidence 777 999999999999999999999999999999999999999999999999999999999999888777 99999
Q ss_pred HHhHHHHHHHHHHhhc
Q 018408 248 YIASLPGFILALGMQF 263 (356)
Q Consensus 248 ~~~~~~~~~~~~~~~~ 263 (356)
++.++..++..+..++
T Consensus 162 ~~~~~~~~~~~~~~~~ 177 (365)
T TIGR00900 162 WVDAVGFAISALLIVS 177 (365)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8877766655544433
No 42
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.85 E-value=4.4e-20 Score=168.40 Aligned_cols=161 Identities=16% Similarity=0.083 Sum_probs=139.0
Q ss_pred hhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHH
Q 018408 103 IGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLW 182 (356)
Q Consensus 103 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 182 (356)
.....+..|.+.+++|+ +..+.+++.+++.+++.++.++.|+++||+|||+++.++.++.+++.++++++++++.+++
T Consensus 19 ~~~~~~~~~~~~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (377)
T TIGR00890 19 VYTWTLLAPPLGRYFGV--GVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYL 96 (377)
T ss_pred HhhhhhHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566778999999999 6777999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHh-
Q 018408 183 GRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGM- 261 (356)
Q Consensus 183 ~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~- 261 (356)
+|++.|++.+..++....++.+++| ++|++++++...+..+|..+++.+.+.+.+..+ ||+.|++.+++.++..+..
T Consensus 97 ~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~f~~~~~~~~~~~~~~~ 174 (377)
T TIGR00890 97 TYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEG-VPAAFIYMGIIFLLVIVLGA 174 (377)
T ss_pred HHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888888888899987 569999999999999998877766666666666 9999999887776665544
Q ss_pred hcccCC
Q 018408 262 QFTVES 267 (356)
Q Consensus 262 ~~~~e~ 267 (356)
+++++.
T Consensus 175 ~~~~~~ 180 (377)
T TIGR00890 175 FLIGYP 180 (377)
T ss_pred HheecC
Confidence 344443
No 43
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.85 E-value=2.6e-19 Score=164.48 Aligned_cols=174 Identities=15% Similarity=0.021 Sum_probs=134.3
Q ss_pred HHHHHHHHHHHHHHhhhhcchhhHHHHHH-HhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHH
Q 018408 87 PHVLIASMSNFLFGYHIGVMNGPIVSIAK-ELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLI 165 (356)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 165 (356)
+.+++..++.+.........++..+.+.+ ++|+ +..+.+++.+++.+++.++.++.|+++||+|.|+++.++.++..
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~l--s~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~ 111 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNF--TTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 44455555555555555666666777765 7898 67779999999999999999999999999999999999999999
Q ss_pred HHHHHHHHh-----hhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccC---
Q 018408 166 LGAIISAQA-----HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAE--- 237 (356)
Q Consensus 166 i~~~~~~~~-----~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~--- 237 (356)
+.++..+++ +++..+++.|++.|++ +..++.....+++++|+++||+++|+.....++|..+++++...+.
T Consensus 112 i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~ 190 (462)
T PRK15034 112 IPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVP 190 (462)
T ss_pred HHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 999999886 8999999999999998 6788889999999999999999999996666666655554443211
Q ss_pred --CC------------CchhHHHHHHhHHHHHHHHHHhhc
Q 018408 238 --DD------------PHWWRTMLYIASLPGFILALGMQF 263 (356)
Q Consensus 238 --~~------------~~~w~~~~~~~~~~~~~~~~~~~~ 263 (356)
.. ..+|+.++++.+++.++..++.++
T Consensus 191 l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~ 230 (462)
T PRK15034 191 VFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWS 230 (462)
T ss_pred HHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 10 112777777766666655544443
No 44
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.85 E-value=2.1e-19 Score=170.52 Aligned_cols=184 Identities=16% Similarity=0.292 Sum_probs=162.2
Q ss_pred hhHHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHH
Q 018408 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (356)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 163 (356)
.+++.+..++++.+...++.......+|.+.+++|. +..+.+++.+.+.+++.++.++.|+++||+|||++++++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 94 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGL--TTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 345566777788888888888888889999999998 566789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchh
Q 018408 164 LILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (356)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w 243 (356)
.+++.++.+++++++.+++.|++.|++.++..+....++.|++|+++|++++++...+..+|..+++.+.+.+.+..+ |
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-w 173 (496)
T PRK03893 95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWG-W 173 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-H
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999888877 9
Q ss_pred HHHHHHhHHHHHHHHHHhhcccCChHH
Q 018408 244 RTMLYIASLPGFILALGMQFTVESPRW 270 (356)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~e~p~~ 270 (356)
|+.|++.++..++..+....+||++++
T Consensus 174 ~~~f~~~~~~~~~~~~~~~~~p~~~~~ 200 (496)
T PRK03893 174 RALFFIGILPIIFALWLRKNLPEAEDW 200 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCchhh
Confidence 999988666555544445557877654
No 45
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.85 E-value=4.2e-20 Score=170.62 Aligned_cols=218 Identities=22% Similarity=0.279 Sum_probs=176.8
Q ss_pred HhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhh--hHHHHHHHHHHHHhhhhh
Q 018408 116 ELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH--SLDEMLWGRFLVGLGIGV 193 (356)
Q Consensus 116 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~l~G~~~g~ 193 (356)
++++ +..+.+++.+.+++|+++++++.|+++||+|-|+++.++.++.++++++..++. +++.+++.|+++|++.|.
T Consensus 67 ~~~w--s~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 67 EYDW--SSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred eecC--CHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 4556 667799999999999999999999999999999999999999999999998775 445778899999999999
Q ss_pred hhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCC-CchhHHHHHHhHHHHHHHHHHhhc-ccCChHHH
Q 018408 194 NTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD-PHWWRTMLYIASLPGFILALGMQF-TVESPRWL 271 (356)
Q Consensus 194 ~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~-~~~w~~~~~~~~~~~~~~~~~~~~-~~e~p~~~ 271 (356)
.++....+.+.|+|+++|++..++...+..+|.+++-++++++.+. .| |+++|++.++..++..+++++ ..|+|..
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~G-W~sifY~~g~~g~i~~~~w~~~~~d~P~~- 222 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLG-WPSIFYVFGIVGLIWFILWFLFYSDSPSK- 222 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCC-CchHHHHHHHHHHHHHHHHHHHhcCCccc-
Confidence 9999999999999999999999999999999999999999999988 56 999999999888887766544 5566642
Q ss_pred HhcCCHHHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCC--CccchhhhcccCcchhhHHHHHHHHHHHHHHHHHHHhhh
Q 018408 272 CKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSD--LDSQWSELLEEPHSRVAFIGDGALASLLVGVTNFAGLRS 349 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (356)
+.. -.++|.+.+++...++..+ .+..|++++++|.+|...+.............+.+++++
T Consensus 223 --h~~---------------is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~ 285 (466)
T KOG2532|consen 223 --HPN---------------ISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYL 285 (466)
T ss_pred --CCC---------------CCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 111 1111222222222222111 357899999999999999999888888888888888887
Q ss_pred hhhcc
Q 018408 350 EKYCG 354 (356)
Q Consensus 350 ~~~~g 354 (356)
.-.++
T Consensus 286 ~~VL~ 290 (466)
T KOG2532|consen 286 KEVLG 290 (466)
T ss_pred HHHhC
Confidence 76554
No 46
>PRK03699 putative transporter; Provisional
Probab=99.85 E-value=5.1e-19 Score=162.86 Aligned_cols=175 Identities=15% Similarity=0.087 Sum_probs=152.8
Q ss_pred hHHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHH
Q 018408 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (356)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 164 (356)
+++.++.+.+..+..+......+..+|.+.+++|+ +..+.+++.+.+.+++.++.++.|+++||+|||++++.+.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~--s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~ 82 (394)
T PRK03699 5 RIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNL--PVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALM 82 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 45566677778888888888888889999999999 6677999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCC-Cchh
Q 018408 165 ILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD-PHWW 243 (356)
Q Consensus 165 ~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~-~~~w 243 (356)
+++.++.+++++++.+++.|++.|++.+...+....++.|++|+++|+..+++.+....+|+.++|.+.+.+... .+ |
T Consensus 83 ~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~g-w 161 (394)
T PRK03699 83 ILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIE-W 161 (394)
T ss_pred HHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-H
Confidence 999999999999999999999999999988888889999999999999999998888899999999888776543 45 9
Q ss_pred HHHHHHhHHHHHHHHHHhh
Q 018408 244 RTMLYIASLPGFILALGMQ 262 (356)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~ 262 (356)
|+.|.+.+++.++..+..+
T Consensus 162 ~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 162 YWVYACIGLVYVAIFILTL 180 (394)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999987777665554433
No 47
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.85 E-value=1.3e-19 Score=169.72 Aligned_cols=175 Identities=14% Similarity=0.108 Sum_probs=137.3
Q ss_pred HHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHH
Q 018408 92 ASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIIS 171 (356)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 171 (356)
+.+...........+....|++.++ |+ +..+.+++.+.+.+++.+++++.|+++||+|||++++++.++.+++.+++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~p~l~~~-g~--s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~ 110 (452)
T PRK11273 34 IFFGYAAYYLVRKNFALAMPYLVEQ-GF--SRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFM 110 (452)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHc-CC--CHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHH
Confidence 3333344444444456667888877 88 56679999999999999999999999999999999999999999999888
Q ss_pred HHhh----hHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHH-HHHHhhhccCCCCchhHHH
Q 018408 172 AQAH----SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGII-TSLFLGIPAEDDPHWWRTM 246 (356)
Q Consensus 172 ~~~~----~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~-~~~~i~~~l~~~~~~w~~~ 246 (356)
++.+ ++..++++|++.|++.+...+.....+.|++|+++|++++++++.+..+|+. .+++++..+....+ ||+.
T Consensus 111 ~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~g-w~~~ 189 (452)
T PRK11273 111 GFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFND-WHAA 189 (452)
T ss_pred HhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcc-HHHH
Confidence 7753 6778889999999999988888888899999999999999999999998864 45544332322335 9999
Q ss_pred HHHhHHHHHHH-HHHhhcccCChHH
Q 018408 247 LYIASLPGFIL-ALGMQFTVESPRW 270 (356)
Q Consensus 247 ~~~~~~~~~~~-~~~~~~~~e~p~~ 270 (356)
|++.+++.++. ++..+++||+|+.
T Consensus 190 f~i~~~~~~~~~~l~~~~~~~~~~~ 214 (452)
T PRK11273 190 LYMPAFAAILVALFAFAMMRDTPQS 214 (452)
T ss_pred HHHHHHHHHHHHHHHHHHccCCHhh
Confidence 99877766554 4455667887653
No 48
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.85 E-value=9.9e-20 Score=164.49 Aligned_cols=161 Identities=11% Similarity=0.071 Sum_probs=141.3
Q ss_pred hcchhhHHHHHHHhCCCCChhH-HHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHH
Q 018408 104 GVMNGPIVSIAKELGFEGNPIL-EGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLW 182 (356)
Q Consensus 104 ~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 182 (356)
.......|.+.+++|+ +..+ .|.+.++++.++.++.+++|+++||+|.|+++.++.+.+++.+++.++++++..+.+
T Consensus 43 ~n~s~a~p~L~~elgl--T~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i 120 (511)
T TIGR00806 43 PGESFITPYLLTVLNF--TEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQL 120 (511)
T ss_pred chHHHHHHHHHHHcCC--CHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455667899999999 6667 899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHH---hHHHHHHHHH
Q 018408 183 GRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYI---ASLPGFILAL 259 (356)
Q Consensus 183 ~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~---~~~~~~~~~~ 259 (356)
.|++.|++.|... ....++..++|+++|+++.+++..+..+|.++++++++. ....+ |++.+.+ .....+++++
T Consensus 121 ~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~g-Wr~y~~Ln~Isl~s~~~a~~ 197 (511)
T TIGR00806 121 MEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLG-WISYSTLNIISLVFMTFSVF 197 (511)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcC-chhHHHHHHHHHHHHHHHHH
Confidence 9999999999999 999999999999999999999999999999999999998 44556 8775543 4444455566
Q ss_pred HhhcccCChH
Q 018408 260 GMQFTVESPR 269 (356)
Q Consensus 260 ~~~~~~e~p~ 269 (356)
+.+++|..++
T Consensus 198 ~a~~LP~~~~ 207 (511)
T TIGR00806 198 LALFLKRPKR 207 (511)
T ss_pred HHHhCCCCch
Confidence 6788886554
No 49
>PRK10504 putative transporter; Provisional
Probab=99.84 E-value=6.4e-19 Score=166.07 Aligned_cols=177 Identities=21% Similarity=0.317 Sum_probs=155.5
Q ss_pred HHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHH
Q 018408 88 HVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (356)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~ 167 (356)
.++.++++.+...++...+++.+|.+.+++|. +..+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 88 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGE--SPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLG 88 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 45666777788888888888889999999998 6667889999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHH
Q 018408 168 AIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTML 247 (356)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~ 247 (356)
.+++.++++++.++++|+++|++.+...+....++.|++|+++|+++.++......+|..++|.+++.+.++.+ |++.|
T Consensus 89 ~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~g-w~~~f 167 (471)
T PRK10504 89 SLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYAS-WHWIF 167 (471)
T ss_pred HHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcc-HHHHH
Confidence 98888899999999999999999999999999999999999999999999999999999999999999988887 99999
Q ss_pred HHhHHHHHHHHHHh-hcccCC
Q 018408 248 YIASLPGFILALGM-QFTVES 267 (356)
Q Consensus 248 ~~~~~~~~~~~~~~-~~~~e~ 267 (356)
++.....++..+.. ...|+.
T Consensus 168 ~~~~~~~~l~~~~~~~~~~~~ 188 (471)
T PRK10504 168 LINIPVGIIGAIATLMLMPNY 188 (471)
T ss_pred HHHHHHHHHHHHHHHHhCCCc
Confidence 99876666555443 334443
No 50
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.84 E-value=3.5e-19 Score=164.01 Aligned_cols=181 Identities=17% Similarity=0.207 Sum_probs=152.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHH
Q 018408 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (356)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 164 (356)
.++.++.+.+..+...+....+.+.+|.+.+++|. ++.+.+++.+.+.+++.++.++.|+++||+|||+++.++.++.
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~ 83 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNV--REGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIF 83 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHH
Confidence 34444555555555556666677778999999999 5666999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhH
Q 018408 165 ILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWR 244 (356)
Q Consensus 165 ~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~ 244 (356)
+++.+++.++++++.+++.|++.|++.+...+....+..|.++.++|+.++++.+.+..+|..++|.+++.+.+..+ |+
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~~ 162 (394)
T PRK11652 84 ILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFG-WR 162 (394)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hH
Confidence 99999999999999999999999999988888888889999999999999999999999999999999998888777 99
Q ss_pred HHHHHhHHHHHHHH-HHhhcccCCh
Q 018408 245 TMLYIASLPGFILA-LGMQFTVESP 268 (356)
Q Consensus 245 ~~~~~~~~~~~~~~-~~~~~~~e~p 268 (356)
+.|++.++..++.. +..++.||++
T Consensus 163 ~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 163 ACYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccC
Confidence 99998776655443 3445577763
No 51
>PRK11043 putative transporter; Provisional
Probab=99.84 E-value=5.2e-19 Score=163.21 Aligned_cols=169 Identities=17% Similarity=0.159 Sum_probs=146.8
Q ss_pred HHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhh
Q 018408 96 NFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH 175 (356)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~ 175 (356)
.+...+....+.+..|.+.+++|. +..+.+++.+++.+++.++++++|+++||+|||+++..+.++..++.+++.+++
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 92 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQT--SASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVE 92 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 344445556667777888999998 677799999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHH
Q 018408 176 SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGF 255 (356)
Q Consensus 176 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~ 255 (356)
+++.+++.|++.|++.+...+....++.|++|+++++...+.......+|..++|.+++.+.+..+ |++.|++.++..+
T Consensus 93 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~~~~~~~~~~~~~ 171 (401)
T PRK11043 93 SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFG-WQAIFATLFAITL 171 (401)
T ss_pred CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHHHH
Confidence 999999999999999888888888899999999989999998888889999999999999888887 9999998877777
Q ss_pred HHHHHhhcccCC
Q 018408 256 ILALGMQFTVES 267 (356)
Q Consensus 256 ~~~~~~~~~~e~ 267 (356)
+..+..++++|+
T Consensus 172 ~~~~~~~~~~~~ 183 (401)
T PRK11043 172 LLILPTLRLKPS 183 (401)
T ss_pred HHHHHHHHcCCC
Confidence 766655556554
No 52
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.84 E-value=6.2e-20 Score=169.94 Aligned_cols=225 Identities=17% Similarity=0.155 Sum_probs=171.1
Q ss_pred HHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhh
Q 018408 112 SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGI 191 (356)
Q Consensus 112 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~ 191 (356)
.+.++.++ ...+.+.+.+++.++++++.++++.+.||++-.+.+....+++++..++.+..+|++.+++.|++.|+++
T Consensus 71 g~~edl~~--~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~e 148 (495)
T KOG2533|consen 71 GLKEDLKL--VGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFE 148 (495)
T ss_pred CCccccch--hhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 34567666 4455899999999999999999999999999999999999999998888888999999999999999999
Q ss_pred hhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCC------CCchhHHHHHHhHHHHHHHHH-Hhhcc
Q 018408 192 GVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED------DPHWWRTMLYIASLPGFILAL-GMQFT 264 (356)
Q Consensus 192 g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~------~~~~w~~~~~~~~~~~~~~~~-~~~~~ 264 (356)
++.+|....+++.||.+++||+.++++..+..+|.++|.+++..+.. ..| |||.|++.++++++..+ +.+++
T Consensus 149 s~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~g-W~~~FiI~G~i~~~~gi~~f~~l 227 (495)
T KOG2533|consen 149 SGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAG-WRWLFIIEGVITLVLGIVVFFFL 227 (495)
T ss_pred cccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCC-ceeehhHHHHHHHHHHheEEEEe
Confidence 99999999999999999999999999999999999999999887532 334 99999998877776654 55668
Q ss_pred cCChHHHHhcCCHHHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCccchhhhcccCcchhhHHHHHHHHHHHHHHHHH
Q 018408 265 VESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGDGALASLLVGVTNF 344 (356)
Q Consensus 265 ~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (356)
|+.|.-..-..+ +|..-..++.+.. +.... +++.+...+++.+++|..|...++..+....-.++.++
T Consensus 228 p~~P~~~~fl~~-~ek~~~~~~~~~~----------~~~~~-~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~ 295 (495)
T KOG2533|consen 228 PDNPSKAWFLTD-EEKELVVERLRES----------PSGGI-ENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYW 295 (495)
T ss_pred cCChhhccccch-HHHHHHHHHHHhc----------cCCCc-ccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHH
Confidence 988752100000 0000000000000 00000 01133578999999999999999987766666666666
Q ss_pred HHhhhhh
Q 018408 345 AGLRSEK 351 (356)
Q Consensus 345 ~~~~~~~ 351 (356)
.+.++.-
T Consensus 296 lpl~l~~ 302 (495)
T KOG2533|consen 296 LPLYLKS 302 (495)
T ss_pred HHHHHHc
Confidence 6666544
No 53
>PRK10133 L-fucose transporter; Provisional
Probab=99.83 E-value=8.9e-19 Score=163.01 Aligned_cols=149 Identities=19% Similarity=0.260 Sum_probs=131.1
Q ss_pred HHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHH
Q 018408 86 FPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLI 165 (356)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 165 (356)
...+..+.+.++..++.........|.+++++|. ++.+.+++.+.+.+++.+++++.|+++||+|||+++.++.++.+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~--s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~ 102 (438)
T PRK10133 25 IIPFALLCSLFFLWAVANNLNDILLPQFQQAFTL--TNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYA 102 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 3345566677777788888888889999999999 67779999999999999999999999999999999999999999
Q ss_pred HHHHHH---HHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhcc
Q 018408 166 LGAIIS---AQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPA 236 (356)
Q Consensus 166 i~~~~~---~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 236 (356)
++.+++ ..++++..++++|+++|++.|...+....++.|+.|.++|+..+++.+..+.+|..+++.++..+
T Consensus 103 ~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 103 LGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999875 45789999999999999999999999999999987777777789999999999999999887643
No 54
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.83 E-value=2.2e-19 Score=167.49 Aligned_cols=179 Identities=15% Similarity=0.109 Sum_probs=143.2
Q ss_pred HHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHH
Q 018408 87 PHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLIL 166 (356)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i 166 (356)
..++...+.+.........+....|.+.+ +|. +..+.+++.+++.++..++.++.|+++||+|||+.+.++.++.++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~--s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~ 103 (438)
T TIGR00712 27 QVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGF--SKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAA 103 (438)
T ss_pred HHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCC--CHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHH
Confidence 33444444555555555555666777775 587 666799999999999999999999999999999999999999999
Q ss_pred HHHHHHHh----hhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCC-CCc
Q 018408 167 GAIISAQA----HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED-DPH 241 (356)
Q Consensus 167 ~~~~~~~~----~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~-~~~ 241 (356)
+.++.++. .++..+++.|++.|++.+..++....++.|++|+++|++++++++.+..+|+.+++.+.+...+ ..+
T Consensus 104 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~ 183 (438)
T TIGR00712 104 VMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFND 183 (438)
T ss_pred HHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhh
Confidence 88877654 4567778889999999998888888999999999999999999999999999998887665444 345
Q ss_pred hhHHHHHHhHHHHHHHH-HHhhcccCChH
Q 018408 242 WWRTMLYIASLPGFILA-LGMQFTVESPR 269 (356)
Q Consensus 242 ~w~~~~~~~~~~~~~~~-~~~~~~~e~p~ 269 (356)
||+.|++.+++.++.. +..+++||+|+
T Consensus 184 -w~~~f~~~~~~~~i~~~~~~~~~~~~~~ 211 (438)
T TIGR00712 184 -WHAALYFPAICAIIVALFAFAMMRDTPQ 211 (438)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 9999999877766654 45566788764
No 55
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.83 E-value=7.4e-19 Score=161.73 Aligned_cols=171 Identities=20% Similarity=0.296 Sum_probs=147.0
Q ss_pred HHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHH
Q 018408 94 MSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQ 173 (356)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~ 173 (356)
...+........+.+.+|.+.+++|. +..+.++..+.+.++..++.++.|+++||+|||+.++++.++.+++.+++..
T Consensus 10 ~~~~~~~~~~~~~~~~lp~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~ 87 (392)
T PRK10473 10 ALVLLYPAGIDMYLVGLPRIAADLNA--SEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSL 87 (392)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 33344444555556778999999998 5667899999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHH
Q 018408 174 AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLP 253 (356)
Q Consensus 174 ~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~ 253 (356)
+++++.+++.|++.|++.+...+....++.|.+|+++|++++++.+....+|..++|.+++.+.+..+ |++.+++.++.
T Consensus 88 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g-~~~~~~~~~~~ 166 (392)
T PRK10473 88 AETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFP-WQSLFYTMAAM 166 (392)
T ss_pred hCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC-hHHHHHHHHHH
Confidence 99999999999999999999889999999999999999999999999999999999999888777777 99999988776
Q ss_pred HHHHHH-HhhcccCC
Q 018408 254 GFILAL-GMQFTVES 267 (356)
Q Consensus 254 ~~~~~~-~~~~~~e~ 267 (356)
.++..+ ..+++||+
T Consensus 167 ~~i~~~~~~~~~~~~ 181 (392)
T PRK10473 167 GILVLLLSLFILKET 181 (392)
T ss_pred HHHHHHHHHHHcCCC
Confidence 665544 34556765
No 56
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.83 E-value=1.2e-18 Score=160.65 Aligned_cols=171 Identities=18% Similarity=0.198 Sum_probs=147.3
Q ss_pred HHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHH
Q 018408 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (356)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 168 (356)
+..++...+..++..+..++.+|.+++++|+ +..+.+++.+.+.+++.++.++.|++.||+|||++++++.++++++.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~--s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTL--TAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 4566677788888888888999999999999 67779999999999999999999999999999999999999999998
Q ss_pred HHHHH---hhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCC-----
Q 018408 169 IISAQ---AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP----- 240 (356)
Q Consensus 169 ~~~~~---~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~----- 240 (356)
++... .++++.+++.|++.|++.|...+....++.+..|+++|++.+++.+.+..+|..+++.++..+....
T Consensus 83 ~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~ 162 (410)
T TIGR00885 83 FLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQS 162 (410)
T ss_pred HHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccch
Confidence 87644 3588999999999999999999999999999999999999999999999999999999887664221
Q ss_pred --------------------chhHHHHHHhHHHHHHHHHHh
Q 018408 241 --------------------HWWRTMLYIASLPGFILALGM 261 (356)
Q Consensus 241 --------------------~~w~~~~~~~~~~~~~~~~~~ 261 (356)
.+||+.|++.+++.++..+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 163 QDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred hhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 139999988777666554443
No 57
>PRK15075 citrate-proton symporter; Provisional
Probab=99.82 E-value=4.1e-18 Score=158.82 Aligned_cols=167 Identities=22% Similarity=0.302 Sum_probs=134.1
Q ss_pred HHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHH-----HHHHHHHHHhHHhhhhhhchhHHHHHh
Q 018408 86 FPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIF-----IAGAFVGSISSGSLADKLGCRRTFQID 160 (356)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~l~dr~Grr~~~~~~ 160 (356)
++....+.++.+...++...++...|.+.++++.+..+. ..+..+.. .++..+++++.|+++||+|||+.++.+
T Consensus 14 ~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 14 ARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEF-ASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCch-HHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 345677788899999999999999999999998854431 22222222 223347889999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhHH--------HHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHh
Q 018408 161 TIPLILGAIISAQAHSLD--------EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFL 232 (356)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~--------~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i 232 (356)
.++.+++.+++++++++. .++++|+++|++.+...+....+++|++|+++|++++++...+..+|..+++.+
T Consensus 93 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~ 172 (434)
T PRK15075 93 LSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALL 172 (434)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998876 368899999999999988889999999999999999999888877777777666
Q ss_pred hhccC--------CCCchhHHHHHHhHHHH
Q 018408 233 GIPAE--------DDPHWWRTMLYIASLPG 254 (356)
Q Consensus 233 ~~~l~--------~~~~~w~~~~~~~~~~~ 254 (356)
++.+. +..+ ||+.|++.++..
T Consensus 173 g~~l~~~~~~~~~~~~g-Wr~~f~~~~~~~ 201 (434)
T PRK15075 173 GYLLNQWLSPAQMAEWG-WRIPFLIGCLIV 201 (434)
T ss_pred HHHHHHhCCHHHHhccc-hHHHHHHHHHHH
Confidence 55442 3456 999999865443
No 58
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.82 E-value=6.9e-19 Score=166.43 Aligned_cols=183 Identities=15% Similarity=0.111 Sum_probs=138.2
Q ss_pred cchhhHHHHH-HHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHH-H--HHhhhHHHH
Q 018408 105 VMNGPIVSIA-KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAII-S--AQAHSLDEM 180 (356)
Q Consensus 105 ~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~-~--~~~~~~~~~ 180 (356)
....++|.+. +.+|+ +....++..+...++..++.++.|+++||+|||+.++++.++..++.+. . ..+++...+
T Consensus 268 ~~~~~~p~~l~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (490)
T PRK10642 268 MLLTYMPSYLSHNLHY--SEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLI 345 (490)
T ss_pred HHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence 3344556554 56787 4444667777888899999999999999999999988877654433332 2 223456777
Q ss_pred HHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHH
Q 018408 181 LWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALG 260 (356)
Q Consensus 181 ~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~ 260 (356)
++++++.|++.+...+....++.|++|++.|++++++......+++.++|.+.+++.+..++|+..+++..+++++.++.
T Consensus 346 ~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~ 425 (490)
T PRK10642 346 FAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLIT 425 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence 78899999888877777888899999999999999974433455567888888887765544777777767777777777
Q ss_pred hhcccCChHHHHhc-----CCHHHHHHHHHHHcC
Q 018408 261 MQFTVESPRWLCKG-----GMLNDAKAVIANLWG 289 (356)
Q Consensus 261 ~~~~~e~p~~~~~~-----~~~~~~~~~~~~~~~ 289 (356)
.+++||+|+++.++ ++.+|+++.++++++
T Consensus 426 ~~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~~ 459 (490)
T PRK10642 426 GVTMKETANRPLKGATPAASDIQEAKEILVEHYD 459 (490)
T ss_pred HHHhccccCCCCCCccccccchhhHHHHhhcccc
Confidence 77789999987755 888999999998874
No 59
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.82 E-value=8.7e-18 Score=154.00 Aligned_cols=151 Identities=19% Similarity=0.253 Sum_probs=137.4
Q ss_pred HHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHH
Q 018408 88 HVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (356)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~ 167 (356)
.++.+.++.+.........++.+|.+.+++|. +..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~ 84 (381)
T PRK03633 7 PVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHL--PTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAG 84 (381)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666677777888888899999999999998 6677999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCC
Q 018408 168 AIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP 240 (356)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 240 (356)
.++++++++++.++++|++.|++.+...+.....+.+..++++|++++++++.+..+|..+++.+++.+.+..
T Consensus 85 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 157 (381)
T PRK03633 85 CAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTEL 157 (381)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 9999999999999999999999999888888778888999999999999999999999999999999887653
No 60
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.81 E-value=2.4e-18 Score=158.14 Aligned_cols=170 Identities=19% Similarity=0.146 Sum_probs=138.3
Q ss_pred HHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHH
Q 018408 92 ASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIIS 171 (356)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 171 (356)
..++.++..+.........+.+.++++. +..+.+++.+.+.+++.++.++.|+++||+|||++++++.++.+++.+++
T Consensus 8 l~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~ 85 (393)
T PRK11195 8 IMAAQFFSALADNALLFAAIALLKELHY--PDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLM 85 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC--cHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHH
Confidence 3444555555444444545566778877 56668999999999999999999999999999999999999999888877
Q ss_pred HHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhH
Q 018408 172 AQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIAS 251 (356)
Q Consensus 172 ~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~ 251 (356)
++..+. ++.|+++|++.+...+...+++.|++|+++|++++++.+....+|..+||.+++.+.+. . |+..+.+.+
T Consensus 86 ~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~-~~~~~~i~~ 160 (393)
T PRK11195 86 LFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-H-AEAALAVCA 160 (393)
T ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHH
Confidence 776664 67899999999999999999999999999999999999999999999999999998874 3 666666665
Q ss_pred HHHHHHHHHhhcccCCh
Q 018408 252 LPGFILALGMQFTVESP 268 (356)
Q Consensus 252 ~~~~~~~~~~~~~~e~p 268 (356)
...++..+..+++||+|
T Consensus 161 ~~~~~~~~~~~~l~~~~ 177 (393)
T PRK11195 161 LIYLLAALFNLFIPRLG 177 (393)
T ss_pred HHHHHHHHHHhcCCCCc
Confidence 55555555556678764
No 61
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.81 E-value=1.6e-18 Score=162.28 Aligned_cols=157 Identities=17% Similarity=0.164 Sum_probs=135.1
Q ss_pred hcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHH-
Q 018408 104 GVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLW- 182 (356)
Q Consensus 104 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~- 182 (356)
..++...|.+.+++|. +..+.+++.+.+.++..++.++.|+++||+|||++++.+.++.++++++++++++++.+++
T Consensus 36 ~~~~~~~~~i~~~~g~--s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 113 (455)
T TIGR00892 36 KAVTVFFKELQQIFQA--TYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLT 113 (455)
T ss_pred cchhhhHHHHHHHhCc--chhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHH
Confidence 4456678899999999 5556899999999999999999999999999999999999999999999999999888765
Q ss_pred HHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHhh
Q 018408 183 GRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQ 262 (356)
Q Consensus 183 ~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~ 262 (356)
.|++.|++.+...+....++.++++ ++|++++++.+.+..+|..++|.+++.+.+..+ ||+.|++.+++.++..+..+
T Consensus 114 ~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~g-wr~~f~~~~~~~~~~~v~~~ 191 (455)
T TIGR00892 114 AGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFG-WRGSFLILGGLLLHCCVCGA 191 (455)
T ss_pred HHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHH
Confidence 4689999998776777788899996 789999999999999999999999998888777 99999998877766555444
Q ss_pred cc
Q 018408 263 FT 264 (356)
Q Consensus 263 ~~ 264 (356)
++
T Consensus 192 ~~ 193 (455)
T TIGR00892 192 LM 193 (455)
T ss_pred Hh
Confidence 43
No 62
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.81 E-value=1.9e-18 Score=158.15 Aligned_cols=162 Identities=19% Similarity=0.324 Sum_probs=144.7
Q ss_pred hhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHH
Q 018408 103 IGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLW 182 (356)
Q Consensus 103 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 182 (356)
...+.+.+|.+.+++|. +..+.+++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++.++++++.+++
T Consensus 7 ~~~~~p~~~~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 84 (377)
T PRK11102 7 IDMYLPALPVIAADFGV--SAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIY 84 (377)
T ss_pred HHHHhccHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHH
Confidence 34556778899999998 6677999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHH-Hh
Q 018408 183 GRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILAL-GM 261 (356)
Q Consensus 183 ~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~-~~ 261 (356)
.|++.|++.+...+....++.|++|+++|++++++.+.+..+|..++|.+++.+.+..+ |++.|++.+++.++..+ ..
T Consensus 85 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 85 MRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFS-WHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-hHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998888777 99999987777666544 34
Q ss_pred hcccCC
Q 018408 262 QFTVES 267 (356)
Q Consensus 262 ~~~~e~ 267 (356)
+++||+
T Consensus 164 ~~~~~~ 169 (377)
T PRK11102 164 FFIPET 169 (377)
T ss_pred HhCCcc
Confidence 556765
No 63
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.80 E-value=2.1e-18 Score=159.05 Aligned_cols=178 Identities=19% Similarity=0.191 Sum_probs=145.4
Q ss_pred HHHHHHHHHHHHHHHhhhhcchhhHHH-HHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHH
Q 018408 86 FPHVLIASMSNFLFGYHIGVMNGPIVS-IAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPL 164 (356)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 164 (356)
.+.+..+.+..+....+..+..+.+|. +.+++|. +..+.+++.+++.+++.+++++.|+++||+|||++++.+.++.
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~--s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~ 91 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGF--SAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGC 91 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--cHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHH
Confidence 344455666666666777777777775 5788898 5677999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHh--------hhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhcc
Q 018408 165 ILGAIISAQA--------HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPA 236 (356)
Q Consensus 165 ~i~~~~~~~~--------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 236 (356)
+++.+.+.++ .++..+++.|+++|++.+...+....++.|++|+++|++++++...+..+|..+++.+++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 171 (399)
T PRK05122 92 ALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLL 171 (399)
T ss_pred HHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHH
Confidence 8776655443 25667889999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCchhHHHHHHhHHHHHHHHHHhhcccC
Q 018408 237 EDDPHWWRTMLYIASLPGFILALGMQFTVE 266 (356)
Q Consensus 237 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e 266 (356)
.+..+ |++.+++.++..++..+.....|+
T Consensus 172 ~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 200 (399)
T PRK05122 172 YHWGG-LAGLGLLIMLLALLGLLLARPRPA 200 (399)
T ss_pred HHccc-HHHHHHHHHHHHHHHHHHHhcCCC
Confidence 88878 999888776665554444333444
No 64
>PRK12382 putative transporter; Provisional
Probab=99.79 E-value=1.1e-17 Score=153.83 Aligned_cols=174 Identities=14% Similarity=0.154 Sum_probs=137.2
Q ss_pred HHHHHHHHHHHhhhhcchhhHHH-HHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHH
Q 018408 90 LIASMSNFLFGYHIGVMNGPIVS-IAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (356)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 168 (356)
+.+.++.+......+...+.+|. +.+++|. +..+.+++.+++.+++.+++++.|+++||+|||++++.+.++..++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~--s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~ 95 (392)
T PRK12382 18 FRIAFAVFLTYMTVGLPLPVIPLFVHHDLGF--GNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAG 95 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHhcCC--cHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHH
Confidence 33344444444555666677774 5788998 66779999999999999999999999999999999999888777665
Q ss_pred HHHHH--------hhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCC
Q 018408 169 IISAQ--------AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP 240 (356)
Q Consensus 169 ~~~~~--------~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 240 (356)
+.... .++++.++++|+++|++.+...+....++.|++|+++|++++++.+.+..+|..++|.+++.+.+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~ 175 (392)
T PRK12382 96 LAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHF 175 (392)
T ss_pred HHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 43221 3578889999999999999888888889999999999999999999999999999999999888877
Q ss_pred chhHHHHHHhHHHHHHHHHHhhcccC
Q 018408 241 HWWRTMLYIASLPGFILALGMQFTVE 266 (356)
Q Consensus 241 ~~w~~~~~~~~~~~~~~~~~~~~~~e 266 (356)
+ |++.+.+..+..++..+.....||
T Consensus 176 g-~~~~~~~~~~~~~~~~~~~~~~~~ 200 (392)
T PRK12382 176 G-FAALALTTMVLPLLAWAFNGTVRK 200 (392)
T ss_pred C-hHHHHHHHHHHHHHHHHHHHhccC
Confidence 7 998777655544433333333444
No 65
>PRK10054 putative transporter; Provisional
Probab=99.78 E-value=2.1e-17 Score=152.03 Aligned_cols=171 Identities=14% Similarity=0.118 Sum_probs=141.6
Q ss_pred HHHHHHHHhhhhcchhhHH-HHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHH
Q 018408 93 SMSNFLFGYHIGVMNGPIV-SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIIS 171 (356)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 171 (356)
.+..+..........+.+| ++.+++|+ +..+.|++.+.+.+++.+++++.|+++||+|||++++++.++.+++.++.
T Consensus 13 ~~~~~~~~~g~~~~~~~l~~~l~~~~g~--s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~ 90 (395)
T PRK10054 13 LASSLLLTIGRGATLPFMTIYLSRQYSL--SVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAI 90 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHH
Confidence 3344444555555555554 56678898 67779999999999999999999999999999999999999999999888
Q ss_pred HHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhH
Q 018408 172 AQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIAS 251 (356)
Q Consensus 172 ~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~ 251 (356)
++.++++.+++++++.|.+.+...+....+..|.+|+++|++++++.+...++|.+++|.+++.+.+ .+ |+..|++.+
T Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g-~~~~f~~~~ 168 (395)
T PRK10054 91 PLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QS-INLPFWLAA 168 (395)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc-cCcHHHHHH
Confidence 9999999888889888888887788888999999999999999999999999999999999998774 45 999999887
Q ss_pred HHHHHHHHHh-hcccCC
Q 018408 252 LPGFILALGM-QFTVES 267 (356)
Q Consensus 252 ~~~~~~~~~~-~~~~e~ 267 (356)
+..++..+.. +++|+.
T Consensus 169 ~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 169 ICSAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 7766664433 345544
No 66
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.78 E-value=3.6e-17 Score=150.74 Aligned_cols=162 Identities=16% Similarity=0.126 Sum_probs=138.1
Q ss_pred hhhhcchhhH-HHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHH
Q 018408 101 YHIGVMNGPI-VSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDE 179 (356)
Q Consensus 101 ~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~ 179 (356)
.......+.+ +++.+++|+ +..+.|++.+...++..+..++.|+++||+|||++++.+.++.+++.+++.+.++++.
T Consensus 24 ~~~~~~~~~~~~~~~~~~g~--s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~ 101 (400)
T PRK11646 24 LGFFVVFPLISIRFVDQLGW--AAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWL 101 (400)
T ss_pred HHHHHHHHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 3333334444 356788898 6777999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHH
Q 018408 180 MLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILAL 259 (356)
Q Consensus 180 ~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~ 259 (356)
+++.|++.|++.+...+...+++.|++|+++|++++++......+|..++|.+++.+. ..+ |++.|++.++..++..+
T Consensus 102 l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g-~~~~f~~~~~~~~~~~i 179 (400)
T PRK11646 102 LWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYD-FRLVCATGAVLFVLAAA 179 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh-HHHHHHHHHHHHHHHHH
Confidence 9999999999998888888999999999999999999999999999999999999887 556 99999987776665543
Q ss_pred H-hhcccC
Q 018408 260 G-MQFTVE 266 (356)
Q Consensus 260 ~-~~~~~e 266 (356)
. .++.||
T Consensus 180 ~~~~~~~~ 187 (400)
T PRK11646 180 FNAWLLPA 187 (400)
T ss_pred HHHHhCCc
Confidence 3 344554
No 67
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.78 E-value=4.3e-17 Score=150.44 Aligned_cols=144 Identities=16% Similarity=0.110 Sum_probs=119.6
Q ss_pred chhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHH---H-hhhHHHHH
Q 018408 106 MNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISA---Q-AHSLDEML 181 (356)
Q Consensus 106 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~---~-~~~~~~~~ 181 (356)
....++.+.+++|. +..+.+++.+.+.+++.++.++.|+++||+|||+++..+.++.+++.+++. . .++++.++
T Consensus 32 ~~~~~~~~~~~~g~--s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 109 (402)
T TIGR00897 32 EQGWLSPFLKALGL--SPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLIL 109 (402)
T ss_pred HHHhHHHHHHHhCC--CHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHH
Confidence 33445556688888 667799999999999999999999999999999999999999888876543 2 25788888
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHH-HHHHHhhhccCCCCchhHHHHHHhHH
Q 018408 182 WGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGI-ITSLFLGIPAEDDPHWWRTMLYIASL 252 (356)
Q Consensus 182 ~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~-~~~~~i~~~l~~~~~~w~~~~~~~~~ 252 (356)
+.|++.|++.+...+.....+.+.+|+++|++++|+.+.+..+|. .+++.+++.+.+..+ |+..++....
T Consensus 110 ~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g-~~~~~~~~~~ 180 (402)
T TIGR00897 110 LFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG-EMNTLWSALA 180 (402)
T ss_pred HHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-hHHHHHHHHH
Confidence 999999999888877778888999999999999999999999996 588999888887777 6655554433
No 68
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.78 E-value=3.2e-17 Score=151.55 Aligned_cols=177 Identities=21% Similarity=0.200 Sum_probs=147.0
Q ss_pred HHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChh---HHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHH
Q 018408 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPI---LEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLI 165 (356)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 165 (356)
...+.++.+..+.......+.+|.+.+++|.+..+. ..+++.+++.++..++.++.|+++||+|||++++.+.++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 95 (408)
T PRK09874 16 LTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMG 95 (408)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHH
Confidence 344455566667777777888899999998864332 34888899999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHH
Q 018408 166 LGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRT 245 (356)
Q Consensus 166 i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~ 245 (356)
++.+++.+.++++.+++.|++.|++.+ ..+....++.+.+|+++|++++++.+.+..+|..+++.+++.+.+..+ |++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~ 173 (408)
T PRK09874 96 IVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYG-LRP 173 (408)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-HHH
Confidence 999888888999999999999999765 456777788999999999999999999999999999999999888777 999
Q ss_pred HHHHhHHHHHHHHHH-hhcccCC
Q 018408 246 MLYIASLPGFILALG-MQFTVES 267 (356)
Q Consensus 246 ~~~~~~~~~~~~~~~-~~~~~e~ 267 (356)
.|++.++..++..+. .++.+|.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 174 VFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccC
Confidence 999887776655543 3445554
No 69
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.78 E-value=1.3e-17 Score=156.59 Aligned_cols=164 Identities=21% Similarity=0.276 Sum_probs=134.0
Q ss_pred HHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHH
Q 018408 93 SMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISA 172 (356)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~ 172 (356)
++......+........++.+..++|-+ ....|+.+...++..++.++.|.++|.+|||.+++.+.++..+++++++
T Consensus 50 ~~~~~~~~~~~~~~a~~l~~I~~diG~~---~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~a 126 (599)
T PF06609_consen 50 SLAVIAAYFVLVLPASILPYINADIGGS---DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCA 126 (599)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHhcCCC---ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhh
Confidence 3333334445555667778999999864 2367899999999999999999999999999999999999999999999
Q ss_pred HhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHH
Q 018408 173 QAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASL 252 (356)
Q Consensus 173 ~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~ 252 (356)
.++|...++++..+.|++.|.... ....++|..|.+.|+.+.++......+...+++.++..+..+.+ |||.|++.++
T Consensus 127 tA~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~-WRw~~~~~~i 204 (599)
T PF06609_consen 127 TAQNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSG-WRWIFYIFII 204 (599)
T ss_pred cCCcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCC-cchHHHHHHH
Confidence 999999999999999999877754 45568999999999988887777666666677788776665555 9999999888
Q ss_pred HHHHHHHHh
Q 018408 253 PGFILALGM 261 (356)
Q Consensus 253 ~~~~~~~~~ 261 (356)
...+.++..
T Consensus 205 ~~~i~~vl~ 213 (599)
T PF06609_consen 205 WSGIALVLI 213 (599)
T ss_pred HHHHHHHHH
Confidence 777665443
No 70
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.78 E-value=3.1e-18 Score=158.90 Aligned_cols=170 Identities=17% Similarity=0.114 Sum_probs=142.2
Q ss_pred HHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHH--
Q 018408 96 NFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQ-- 173 (356)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~-- 173 (356)
.+...+........+|.+.++++. +..+.|++.+.+.+++.++.++.|+++||+|||+++..+.++.+++.+..+.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~ 103 (417)
T PRK10489 26 RFISIFGLGLLGVAVPVQIQMMTG--STLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNA 103 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHH
Confidence 344444555666777888888877 6777999999999999999999999999999999998888777776655432
Q ss_pred ---hhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHh
Q 018408 174 ---AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIA 250 (356)
Q Consensus 174 ---~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~ 250 (356)
.++++.+++.|++.|++.+...+....++.|++|+++|+++.++.+....+|..+++.+++.+.+..+ |++.|++.
T Consensus 104 ~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~-~~~~~~~~ 182 (417)
T PRK10489 104 FLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGG-VAWNYGLA 182 (417)
T ss_pred HcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHh-hHHHHHHH
Confidence 45788888999999999888888888899999999999999999999999999999999998887767 99999988
Q ss_pred HHHHHHHHHHhhcccCCh
Q 018408 251 SLPGFILALGMQFTVESP 268 (356)
Q Consensus 251 ~~~~~~~~~~~~~~~e~p 268 (356)
++..++..+..+.+|+++
T Consensus 183 ~~~~~~~~~~~~~l~~~~ 200 (417)
T PRK10489 183 AAGTFITLLPLLRLPALP 200 (417)
T ss_pred HHHHHHHHHHHHhCCCCC
Confidence 777776666666677653
No 71
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.77 E-value=5.1e-17 Score=148.43 Aligned_cols=171 Identities=15% Similarity=0.061 Sum_probs=137.8
Q ss_pred HHHHHHhhhhcchhhHHH-HHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHH-hHHHHHHHHHHHH
Q 018408 95 SNFLFGYHIGVMNGPIVS-IAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQI-DTIPLILGAIISA 172 (356)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~-~~~~~~i~~~~~~ 172 (356)
.++..++......+.+|. +.+++|. +..+.+++.+.+.++..+..++.|+++||+|||+.++. +.++.+++.++++
T Consensus 5 ~~~~~~~~~~~~~~~l~~~l~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 82 (375)
T TIGR00899 5 VAFLTGIAGALQFPTLSLFLSEEVRA--RPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFA 82 (375)
T ss_pred HHHHHHHHHHHHhhHHHHHHHcccCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHH
Confidence 355666666667777765 5678898 66779999999999999999999999999999887655 5566667777888
Q ss_pred HhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchh--HHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHh
Q 018408 173 QAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSL--GTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIA 250 (356)
Q Consensus 173 ~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~--~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~ 250 (356)
++++++.+++.|++.|.+.+...+....+..|+.|++.|+.. .+....+..+|..+++.+++.+.+..+ ||+.|++.
T Consensus 83 ~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~-~~~~f~~~ 161 (375)
T TIGR00899 83 WNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFG-FTVMFLTA 161 (375)
T ss_pred hcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcc-cHHHHHHH
Confidence 889999999999999888887888888888898887777654 577788889999999999999888777 99999998
Q ss_pred HHHHHHHHHH-hhcccCCh
Q 018408 251 SLPGFILALG-MQFTVESP 268 (356)
Q Consensus 251 ~~~~~~~~~~-~~~~~e~p 268 (356)
++..++..+. .+++||.|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~ 180 (375)
T TIGR00899 162 ALAFVLCGVLVWLFLPSYP 180 (375)
T ss_pred HHHHHHHHHHHHHhCCCcc
Confidence 8776665544 44578765
No 72
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.77 E-value=4e-17 Score=148.18 Aligned_cols=149 Identities=21% Similarity=0.293 Sum_probs=128.8
Q ss_pred hcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHH
Q 018408 104 GVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWG 183 (356)
Q Consensus 104 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 183 (356)
....+.+|.+.+++|+ +..+.+++.+.+.+++.++.++.|+++||+|||+++.++.++..++.+.. ..++.+.+++.
T Consensus 17 ~~~~~~lp~l~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~ 93 (355)
T TIGR00896 17 TSVGPLLPQIRSALGM--SFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAG 93 (355)
T ss_pred ccCcccHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHH
Confidence 4567788999999999 56679999999999999999999999999999999999998888887777 77888899999
Q ss_pred HHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCch-hHHHHHHhHHHHHH
Q 018408 184 RFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHW-WRTMLYIASLPGFI 256 (356)
Q Consensus 184 ~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~-w~~~~~~~~~~~~~ 256 (356)
|++.|++.+...+....++.|++| ++|++++++++.+..+|..+++.+.+.+.+..+. ||+.|.+.++..++
T Consensus 94 ~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~ 166 (355)
T TIGR00896 94 TALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALL 166 (355)
T ss_pred HHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 999999999888888888899886 5799999999999999999999988877765432 99888776654443
No 73
>PTZ00207 hypothetical protein; Provisional
Probab=99.77 E-value=2.2e-16 Score=149.09 Aligned_cols=175 Identities=13% Similarity=0.087 Sum_probs=130.7
Q ss_pred chhHHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHH
Q 018408 83 LPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTI 162 (356)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 162 (356)
.++|..+....+.....+.. ..++...+.+.+++|+ +..+.+++.++. ....++.++.|+++||+|+|++++++.+
T Consensus 24 ~~Rw~~lva~~~~~~~~g~~-y~fsv~s~~L~~~lgl--s~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~l 99 (591)
T PTZ00207 24 PRRFALLVLGAFCSICTSFM-YAFNLISGAMQARYNL--TQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMT 99 (591)
T ss_pred cchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCc--CHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 34555444444333333322 3344566788999999 566678777663 3445677789999999999999999999
Q ss_pred HHHHHHHHHHHh------hhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHH-HHHhhhc
Q 018408 163 PLILGAIISAQA------HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIIT-SLFLGIP 235 (356)
Q Consensus 163 ~~~i~~~~~~~~------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~-~~~i~~~ 235 (356)
++++++++++++ ++++.+.+.|++.|++.+...+.....+.++|| ++||+++|+...+..+|+++ +++..++
T Consensus 100 l~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l 178 (591)
T PTZ00207 100 VFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAF 178 (591)
T ss_pred HHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999987 689999999999999999988888999999997 67999999999999999975 4444444
Q ss_pred cCCCCchhHHHHHHhHHHHHHHHH-Hhhccc
Q 018408 236 AEDDPHWWRTMLYIASLPGFILAL-GMQFTV 265 (356)
Q Consensus 236 l~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~ 265 (356)
+. .+ |+..|++.+++.++..+ .+.+++
T Consensus 179 ~~--~~-~~~~fl~l~vl~~vv~ll~~~~vr 206 (591)
T PTZ00207 179 FS--DN-TSAYFFFLMSFALVVGILAIVFMR 206 (591)
T ss_pred HH--Hh-HHHHHHHHHHHHHHHHHHHHhhee
Confidence 43 23 77777776666555544 344443
No 74
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.76 E-value=5e-17 Score=149.11 Aligned_cols=170 Identities=19% Similarity=0.286 Sum_probs=130.1
Q ss_pred HHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHH--H---HHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHH
Q 018408 98 LFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSI--F---IAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISA 172 (356)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~---~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~ 172 (356)
...++...++...+.+.+++..+.++.+.+.+.+. + .++..+++++.|+++||+|||+++.++.++..++.++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~ 83 (394)
T TIGR00883 4 VEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIG 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHh
Confidence 34555556666666776665542234444444332 2 233346889999999999999999999999999999999
Q ss_pred HhhhHH--------HHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccC-------
Q 018408 173 QAHSLD--------EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAE------- 237 (356)
Q Consensus 173 ~~~~~~--------~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~------- 237 (356)
+++++. .+++.|+++|++.+...+....++.|++|+++|++..++.+.+..+|..+++.++..+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~ 163 (394)
T TIGR00883 84 LLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDA 163 (394)
T ss_pred hCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 988765 47788999999999999999999999999999999999999999999999988765543
Q ss_pred -CCCchhHHHHHHhHHHHHHHHHHhhcccCCh
Q 018408 238 -DDPHWWRTMLYIASLPGFILALGMQFTVESP 268 (356)
Q Consensus 238 -~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~p 268 (356)
+..+ ||+.|++.++..++..+.....+|++
T Consensus 164 ~~~~~-w~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (394)
T TIGR00883 164 LLEWG-WRIPFLVSAVLVLIGLYLRRNLEETP 194 (394)
T ss_pred hhccc-hHHHHHHHHHHHHHHHHHHHhcCCCh
Confidence 2345 99999887776666655555566664
No 75
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.75 E-value=3.4e-17 Score=147.73 Aligned_cols=172 Identities=33% Similarity=0.497 Sum_probs=153.1
Q ss_pred HHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHH
Q 018408 91 IASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAII 170 (356)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 170 (356)
.+.+..+...+......+..|.+.+++|. +..+.+++.+...++..++.++.|+++||+|||+.+.++.++..++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~ 80 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGL--SASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHH
Confidence 34455666777777888888999999888 6667999999999999999999999999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHh
Q 018408 171 SAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIA 250 (356)
Q Consensus 171 ~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~ 250 (356)
..+.++++.+++.|++.|++.+...+....++.|++|+++|++.+++.+.+..+|..+++.+++.+.+..+ |++.+++.
T Consensus 81 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ 159 (352)
T cd06174 81 LAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLG-WRWLFLIL 159 (352)
T ss_pred HHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988777 99999988
Q ss_pred HHHHHHHHHHhhccc
Q 018408 251 SLPGFILALGMQFTV 265 (356)
Q Consensus 251 ~~~~~~~~~~~~~~~ 265 (356)
++..++..+...+++
T Consensus 160 ~~~~~~~~~~~~~~~ 174 (352)
T cd06174 160 AILGLLLALLLLFLL 174 (352)
T ss_pred HHHHHHHHHHHHHHH
Confidence 777776665544443
No 76
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.75 E-value=5.9e-18 Score=149.85 Aligned_cols=189 Identities=22% Similarity=0.291 Sum_probs=149.3
Q ss_pred chhHHHHHHHHHHHHHHHhhhhcchhhHHHHHHHh-CCC-----CChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHH
Q 018408 83 LPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKEL-GFE-----GNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRT 156 (356)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~-----~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~ 156 (356)
|+..+.+.++.++.+.++|+...++...+.+...+ +-+ ..+...+.+..+.++|.++|++++|++.|++|||++
T Consensus 37 w~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~v 116 (538)
T KOG0252|consen 37 WKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKV 116 (538)
T ss_pred HHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhh
Confidence 45556677888999999999999999888776654 221 233447788899999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHhh-------hHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHH---
Q 018408 157 FQIDTIPLILGAIISAQAH-------SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGI--- 226 (356)
Q Consensus 157 ~~~~~~~~~i~~~~~~~~~-------~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~--- 226 (356)
+...+++++++++++++.. -+.++...|+++|+|.|+-+|...+..+|....+.||..++...+...+|.
T Consensus 117 YG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG 196 (538)
T KOG0252|consen 117 YGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAG 196 (538)
T ss_pred hhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhc
Confidence 9999999999999777642 246677889999999999999999999999999999998887544444433
Q ss_pred -HHHHHhhhccCCCC----------chhHHHHHHhHHHHHHHHHHhhcccCChHHH
Q 018408 227 -ITSLFLGIPAEDDP----------HWWRTMLYIASLPGFILALGMQFTVESPRWL 271 (356)
Q Consensus 227 -~~~~~i~~~l~~~~----------~~w~~~~~~~~~~~~~~~~~~~~~~e~p~~~ 271 (356)
+++-++...+.... +-||..+.+++++.++.....+.+|||+++.
T Consensus 197 ~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~ 252 (538)
T KOG0252|consen 197 GIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYT 252 (538)
T ss_pred cHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHH
Confidence 33333333222211 1399999999999998888888899999885
No 77
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.75 E-value=3.4e-17 Score=141.77 Aligned_cols=116 Identities=24% Similarity=0.287 Sum_probs=108.1
Q ss_pred ChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHH
Q 018408 122 NPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIY 201 (356)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~ 201 (356)
+....|++.+.+.++..+.++.+|.++||+|||.+++++++..++...+.+.+.|+..+++.|++.|+.-|.. .+..++
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl-~v~rAi 144 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNL-SVIRAI 144 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch-HHHHHH
Confidence 4556899999999999999999999999999999999999999999999999999977777799999998765 667789
Q ss_pred HHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCC
Q 018408 202 ISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED 238 (356)
Q Consensus 202 ~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 238 (356)
++|.+++++|+.+++.....+.+|.++||.+++++..
T Consensus 145 isdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 145 ISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 9999999999999999999999999999999999887
No 78
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.74 E-value=2.5e-16 Score=138.05 Aligned_cols=228 Identities=18% Similarity=0.185 Sum_probs=186.1
Q ss_pred HHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHH
Q 018408 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (356)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 168 (356)
...+...+++.++........+|.+++.+++ +..+++++...++.|+.+++++.|++.+|+|+|+.+++|+.++++++
T Consensus 15 ~v~~t~lFfl~G~~~~l~diLip~l~~~f~l--s~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~ 92 (422)
T COG0738 15 FVLLTSLFFLWGFITCLNDILIPHLKEVFDL--TYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGA 92 (422)
T ss_pred HHHHHHHHHHHHHHhhcchhhHHHHHHHhCc--cHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 4555666778888888889999999999999 67779999999999999999999999999999999999999999999
Q ss_pred HHHH---HhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCC------
Q 018408 169 IISA---QAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD------ 239 (356)
Q Consensus 169 ~~~~---~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~------ 239 (356)
.++. ...++..++++-++.|.|.+...+..+.+++.+.+++.-...+.+.+.++.+|.+++|++++.+..+
T Consensus 93 ~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~ 172 (422)
T COG0738 93 ALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTM 172 (422)
T ss_pred HHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhcc
Confidence 9885 4568889999999999999999999999999999998888999999999999999999999987763
Q ss_pred ------------CchhHHHHHHhHHHHHHHHHHhhcc--cCChHHHHhcCCHHHHHHHHHHHcCCcchHHHHHHHHHHHH
Q 018408 240 ------------PHWWRTMLYIASLPGFILALGMQFT--VESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIK 305 (356)
Q Consensus 240 ------------~~~w~~~~~~~~~~~~~~~~~~~~~--~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (356)
...|++.|...+...++..+..... |+.+ + ...
T Consensus 173 ~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~-----------------------~----------~~~ 219 (422)
T COG0738 173 SAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQ-----------------------V----------AAP 219 (422)
T ss_pred CHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCC-----------------------c----------ccc
Confidence 1136777777666655555444332 2220 0 000
Q ss_pred hcCCCCccchhhhcccCcchhhHHHHHHHHHHHHHHHHHHHhhhhh
Q 018408 306 KDGSDLDSQWSELLEEPHSRVAFIGDGALASLLVGVTNFAGLRSEK 351 (356)
Q Consensus 306 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (356)
++.+..+....+++++|.++...++...|+++.+.+.+++.+++.-
T Consensus 220 ~~~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~ 265 (422)
T COG0738 220 SLGASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEE 265 (422)
T ss_pred cccccccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 1111111257889999999999999999999999999999888754
No 79
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.74 E-value=9.7e-17 Score=150.92 Aligned_cols=173 Identities=18% Similarity=0.171 Sum_probs=136.9
Q ss_pred HHHHHHHHHHHHhhhhcchhhH-HHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhh-hchhHHHHHhHHHHHH
Q 018408 89 VLIASMSNFLFGYHIGVMNGPI-VSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK-LGCRRTFQIDTIPLIL 166 (356)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~i 166 (356)
++.+.+..+...+..+.....+ .++.+++|+ +....+++.+.+.....+..+++|+++|| +|||++++++.+++++
T Consensus 16 ~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~--~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~ 93 (489)
T PRK10207 16 FFMIFFVELWERFGYYGVQGILAVFFVKQLGF--SQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAI 93 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHH
Confidence 3444444444555544444444 466778888 55557888888888888888899999999 9999999999999999
Q ss_pred HHHHHHHhhhHHH-HHHHHHHHHhhhhhhhhHHHHHHHhhcCCC--ccchhHHHhHHHHHHHHHHHHHhhhccCCCCchh
Q 018408 167 GAIISAQAHSLDE-MLWGRFLVGLGIGVNTVLVPIYISEVAPTK--YRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (356)
Q Consensus 167 ~~~~~~~~~~~~~-~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~--~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w 243 (356)
+.++++++.+... ++++|+++|++.|...+...+++.|.+|++ +|+.+.++++.+.++|.+++|.+++++.++.| |
T Consensus 94 g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~g-w 172 (489)
T PRK10207 94 GYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFG-Y 172 (489)
T ss_pred HHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhC-h
Confidence 9999988876444 557899999999999999999999999887 45778999999999999999999999999888 9
Q ss_pred HHHHHHhHHHHHHHHHHhhcc
Q 018408 244 RTMLYIASLPGFILALGMQFT 264 (356)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~ 264 (356)
++.|++.++..++.++.+.+.
T Consensus 173 ~~~F~i~~i~~~~~~~~~~~~ 193 (489)
T PRK10207 173 SVTYNLCGAGLIIALLVYFAC 193 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHc
Confidence 999998755444444433333
No 80
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.73 E-value=8.6e-16 Score=145.06 Aligned_cols=175 Identities=15% Similarity=0.178 Sum_probs=138.5
Q ss_pred HHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhh-----chhHH-HHHhHH
Q 018408 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL-----GCRRT-FQIDTI 162 (356)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----Grr~~-~~~~~~ 162 (356)
.+.+.+..+..+.........+|.+.++.|. +..+.+.. +.....+ ++.+++|+++||+ |||+. ++++.+
T Consensus 14 ~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~--~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i 89 (491)
T PRK11010 14 SAILLILGFASGLPLALTSGTLQAWMTVENI--DLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQL 89 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--CHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHH
Confidence 3444555556666666777788888888888 45456664 3333333 6889999999999 99986 556777
Q ss_pred HHHHHHHHHHHh---hhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCC
Q 018408 163 PLILGAIISAQA---HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD 239 (356)
Q Consensus 163 ~~~i~~~~~~~~---~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 239 (356)
+.+++..++++. ++++.+.+.+++.|++.+...+...++..|++|+++|+++.++...+..+|.++++.++..+.++
T Consensus 90 ~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~ 169 (491)
T PRK11010 90 LLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADR 169 (491)
T ss_pred HHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 777777777665 46778888999999999999999999999999999999999999999999999999999888874
Q ss_pred -CchhHHHHHHhHHHHHHHHHHhhcccCCh
Q 018408 240 -PHWWRTMLYIASLPGFILALGMQFTVESP 268 (356)
Q Consensus 240 -~~~w~~~~~~~~~~~~~~~~~~~~~~e~p 268 (356)
.| ||..|++.++..++..+..+++||++
T Consensus 170 ~~G-Wr~~f~i~a~l~ll~~l~~~~~~e~~ 198 (491)
T PRK11010 170 YLG-WQGMYWLMAALLIPCIIATLLAPEPT 198 (491)
T ss_pred ccC-HHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 46 99999998877777766666677764
No 81
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.73 E-value=1.6e-16 Score=149.33 Aligned_cols=171 Identities=16% Similarity=0.157 Sum_probs=143.1
Q ss_pred HHHHHHHHHHHhhhhcchhhHHHHHH-H--hCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhh-hchhHHHHHhHHHHH
Q 018408 90 LIASMSNFLFGYHIGVMNGPIVSIAK-E--LGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK-LGCRRTFQIDTIPLI 165 (356)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~ 165 (356)
+.+.+..+...+..+...+.+|.+.+ + +|+ +..+.+++.+.+.+++.++.+++|+++|| +|||+++.++.++.+
T Consensus 13 ~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~--s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~ 90 (475)
T TIGR00924 13 FTLFFVELWERFSYYGMQGILAVYLVQQAGLGF--SQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLM 90 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC--CHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHH
Confidence 44444555555555555666665544 4 677 67779999999999999999999999999 899999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCc---cchhHHHhHHHHHHHHHHHHHhhhccCCCCch
Q 018408 166 LGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKY---RGSLGTLCQVGTCLGIITSLFLGIPAEDDPHW 242 (356)
Q Consensus 166 i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~---r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~ 242 (356)
++.++.++++++..+++++++.|++.|...+...++++|++|+++ |+.+.++++.+.++|.+++|.+++.+.++.+
T Consensus 91 ~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g- 169 (475)
T TIGR00924 91 LGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYG- 169 (475)
T ss_pred HHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 999999998888888899999999999998999999999998764 8889999999999999999999999988878
Q ss_pred hHHHHHHhHHHHHHHHHHhhc
Q 018408 243 WRTMLYIASLPGFILALGMQF 263 (356)
Q Consensus 243 w~~~~~~~~~~~~~~~~~~~~ 263 (356)
|++.|++.++..+++.+..++
T Consensus 170 ~~~~f~~~~~~~~~~~l~~~~ 190 (475)
T TIGR00924 170 YHVGFNLAAVGMVIGLLTFFA 190 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 999999877665555444433
No 82
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.73 E-value=2.7e-16 Score=163.67 Aligned_cols=161 Identities=14% Similarity=-0.009 Sum_probs=127.5
Q ss_pred hhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHH---HhhhHHHHHHHH
Q 018408 108 GPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISA---QAHSLDEMLWGR 184 (356)
Q Consensus 108 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~ 184 (356)
...+.+..+++.+.+....+++.+++.+++.++++++|+++||+|||++++++.++.+++.++.. ..++++.++++|
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 110 (1146)
T PRK08633 31 LIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVT 110 (1146)
T ss_pred HHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 34455666777755566678999999999999999999999999999999988876665555443 456889999999
Q ss_pred HHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCC--------CchhHHHHHHhH-HHHH
Q 018408 185 FLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD--------PHWWRTMLYIAS-LPGF 255 (356)
Q Consensus 185 ~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~--------~~~w~~~~~~~~-~~~~ 255 (356)
++.|++.+...+...+++.|++|+++|++++++..++..+|.++++.+++++.+. .++|.+.+.+.+ +..+
T Consensus 111 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (1146)
T PRK08633 111 FLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAV 190 (1146)
T ss_pred HHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988765 232444444433 3333
Q ss_pred HHHHHhhcccCCh
Q 018408 256 ILALGMQFTVESP 268 (356)
Q Consensus 256 ~~~~~~~~~~e~p 268 (356)
+.++..+++|++|
T Consensus 191 ~~~~~~~~~~~~~ 203 (1146)
T PRK08633 191 LGLIFAYRLPKVP 203 (1146)
T ss_pred HHHHHHhcCcCCC
Confidence 4444455677765
No 83
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.73 E-value=2.1e-16 Score=139.41 Aligned_cols=226 Identities=16% Similarity=0.089 Sum_probs=171.3
Q ss_pred HHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHH
Q 018408 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (356)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 168 (356)
+++-.+......+.....++..+.+.+++|+ |+.|.+++.++..+...+..++.|.+.||+|.|++.+++.++..+.+
T Consensus 16 L~~S~~af~v~F~VW~l~s~l~~~i~~~~~L--S~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~ 93 (417)
T COG2223 16 LWLSTLAFDVGFMVWTLFSPLGVFIKSDFGL--SEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPC 93 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccCC--CHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHH
Confidence 3333333333334445556666788899999 67779999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhH---HHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCc--hh
Q 018408 169 IISAQAHSL---DEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH--WW 243 (356)
Q Consensus 169 ~~~~~~~~~---~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~--~w 243 (356)
+..+++.+. +.+++++++.|++.+. +++...+++.+||++++|.++|++. ..++|..+..+++..+....+ .|
T Consensus 94 ~~~~~a~~~~~~~~ll~~gll~G~~Gas-Fav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w 171 (417)
T COG2223 94 LGLAFAVTYPSTWQLLVIGLLLGLAGAS-FAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAW 171 (417)
T ss_pred HHHHHHccCCchHHHHHHHHHHhcccce-ehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHH
Confidence 999988544 5999999999997755 4777779999999999999999998 888888888888777776655 38
Q ss_pred HHHHHHhHHHHHHHHH-HhhcccCChHHHHhcCCHHHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCccchhhhcccC
Q 018408 244 RTMLYIASLPGFILAL-GMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEP 322 (356)
Q Consensus 244 ~~~~~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 322 (356)
+.+..+..+..++..+ .++++.+.|...... ++.. ...++.+++++
T Consensus 172 ~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~-------------------------------~~~~--~~~~~~v~~~~ 218 (417)
T COG2223 172 RNVAGIYVVALAIAAVLAWLGMNDVPEHRASV-------------------------------KPQL--PAQLKAVFSNK 218 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCChhhhccc-------------------------------cccc--hhHHHHHhcCc
Confidence 8888877766666544 445555554210000 0000 03466788899
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhhhh
Q 018408 323 HSRVAFIGDGALASLLVGVTNFAGLRSEK 351 (356)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (356)
+.|.+.+.+....+..++..++++.+..-
T Consensus 219 ~~W~lsllY~~tFG~Fvgfs~~l~~~~~~ 247 (417)
T COG2223 219 DTWLLSLLYFATFGGFVGFSAYLPMYLVT 247 (417)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888888887776643
No 84
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.72 E-value=2e-15 Score=139.34 Aligned_cols=171 Identities=17% Similarity=0.161 Sum_probs=139.6
Q ss_pred HHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhh-----chhH-HHHHhHHHHHH
Q 018408 93 SMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL-----GCRR-TFQIDTIPLIL 166 (356)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----Grr~-~~~~~~~~~~i 166 (356)
...++.++...+.....+|.+.++.|+ +..+.|++..+... .+..+++|+++||+ |||| .++++.++.++
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~--~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l 80 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVEGL--DIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAA 80 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHH
Confidence 344566777777788888999999999 66679988776664 58899999999999 8876 67778888887
Q ss_pred HHHHHHHh---hhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCC-ch
Q 018408 167 GAIISAQA---HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP-HW 242 (356)
Q Consensus 167 ~~~~~~~~---~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~-~~ 242 (356)
+....++. .+++.+++..++.+++.+...+...+++.|++|+++|+++.++...+..+|..+++.++..+.+.. +
T Consensus 81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~g- 159 (402)
T PRK11902 81 SIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLG- 159 (402)
T ss_pred HHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccC-
Confidence 77777776 356777777778888888888999999999999999999999999999999999999888887754 5
Q ss_pred hHHHHHHhHHHHHHHHHHhhcccCCh
Q 018408 243 WRTMLYIASLPGFILALGMQFTVESP 268 (356)
Q Consensus 243 w~~~~~~~~~~~~~~~~~~~~~~e~p 268 (356)
||..|++.++..++..+..++.||++
T Consensus 160 w~~~f~i~a~~~l~~~l~~~~~~e~~ 185 (402)
T PRK11902 160 WGNTYLLMAGLMLAGALTTLWAPEPE 185 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 99999998877766655556677753
No 85
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.70 E-value=1.3e-15 Score=148.12 Aligned_cols=140 Identities=14% Similarity=-0.025 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhc
Q 018408 127 GLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVA 206 (356)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~ 206 (356)
.+...+..++.+++.++.|+++||+|||++++++.++.++++++.++.++...+++++++.|++.++..+....+++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34455667888999999999999999999999999999999999988888888888888999988888899999999999
Q ss_pred CCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHhhcccCCh
Q 018408 207 PTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVESP 268 (356)
Q Consensus 207 p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~p 268 (356)
|++.|++++|+.++...+|.+++|++++.+.+. + ....|++.+++.++++++.+++||+.
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~-~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-T-KAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-h-hHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 999999999999999999999999999877654 2 45677777777777777777789873
No 86
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.70 E-value=7.6e-17 Score=140.48 Aligned_cols=153 Identities=16% Similarity=0.156 Sum_probs=139.9
Q ss_pred HHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhh
Q 018408 113 IAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIG 192 (356)
Q Consensus 113 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g 192 (356)
..++...+.++++.|++.+...+.+.+..++.|.+.||+|+|..+++|++.+...++++++.++++.++++|.++|++.+
T Consensus 95 ~~~~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA 174 (464)
T KOG3764|consen 95 PAEAISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSA 174 (464)
T ss_pred chhccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHH
Confidence 34444555567789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHhhcCCCc-cchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHhhcccC
Q 018408 193 VNTVLVPIYISEVAPTKY-RGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVE 266 (356)
Q Consensus 193 ~~~~~~~~~~~e~~p~~~-r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e 266 (356)
...+...+++++.||.++ |++++|+.-.+.++|..+||.+++.+.+..| .+..|++.++++++-..+.+++-|
T Consensus 175 ~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~G-k~aPFlVL~~v~Lld~~L~l~vi~ 248 (464)
T KOG3764|consen 175 FADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG-KSAPFLVLAIVLLLDGALQLLVIE 248 (464)
T ss_pred HHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcC-CcCcHHHHHHHHHHHHHHHHheeC
Confidence 999999999999999755 7999999999999999999999999999988 999999999999888777666544
No 87
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.69 E-value=1.6e-15 Score=157.61 Aligned_cols=143 Identities=19% Similarity=0.168 Sum_probs=117.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHH---hHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHH
Q 018408 124 ILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQI---DTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPI 200 (356)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~ 200 (356)
...++..+++.+.+.++++++|+++||+|||+++.. ..++.++..+.....++++.++++|+++|++.+...+...+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a 131 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence 457788889999999999999999999999997643 22222222233334489999999999999999999999999
Q ss_pred HHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHhhcccCC
Q 018408 201 YISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVES 267 (356)
Q Consensus 201 ~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~ 267 (356)
++.+++|+++|++++|+.+++..+|.+++|.+++++....+ |++.|+..++..++.+++.+++|++
T Consensus 132 ~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (1140)
T PRK06814 132 ILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGN-FVILVALLMGIAVLGWLASLFIPKT 197 (1140)
T ss_pred hhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 99999999999999999999999999999999999988877 9999866666666666666667765
No 88
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.69 E-value=2.6e-15 Score=137.66 Aligned_cols=159 Identities=14% Similarity=-0.017 Sum_probs=125.1
Q ss_pred HHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhH-HHHHHHH-H
Q 018408 92 ASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDT-IPLILGA-I 169 (356)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~-~~~~i~~-~ 169 (356)
+.+.++..........+.+|.+.+++|. +..+.|++.+.+.++..++++++|+++||+||+....... ....+.. .
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~--s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~ 86 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGL--GEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAA 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 4455566666667788889999999999 6777999999999999999999999999999854332221 1111222 2
Q ss_pred HHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHH
Q 018408 170 ISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYI 249 (356)
Q Consensus 170 ~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~ 249 (356)
....+++++.+++.|.++|.+.+...+...++..++ .++|++..|....+.++|.+++|.+++.+.++.| ||..|++
T Consensus 87 ~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g-~~~~f~~ 163 (382)
T TIGR00902 87 FSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFD-EQNILAI 163 (382)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcC-hhHHHHH
Confidence 334678899999999999998888888888777664 4778999999999999999999999999998888 9999888
Q ss_pred hHHHHH
Q 018408 250 ASLPGF 255 (356)
Q Consensus 250 ~~~~~~ 255 (356)
.++..+
T Consensus 164 ~~~~~~ 169 (382)
T TIGR00902 164 LTAGLA 169 (382)
T ss_pred HHHHHH
Confidence 665533
No 89
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.69 E-value=2.8e-15 Score=137.46 Aligned_cols=164 Identities=16% Similarity=0.058 Sum_probs=125.4
Q ss_pred HHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchh----HHHHHhHHHHHHHHHHH
Q 018408 96 NFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCR----RTFQIDTIPLILGAIIS 171 (356)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr----~~~~~~~~~~~i~~~~~ 171 (356)
++......+.+.+.+|.+.+++|. +..+.|++.+++.++..++++++|+++||+||+ +.+.+...+. .....
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~--s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~ 88 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGY--TPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFW 88 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCC--CHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHH
Confidence 444445567778888888899988 677799999999999999999999999999984 3332222221 12223
Q ss_pred HHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhH
Q 018408 172 AQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIAS 251 (356)
Q Consensus 172 ~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~ 251 (356)
...++++.+++.|++.|++.+...+...++..++ .++|++..+....+..+|..++|.+++.+.++.+ ||..|++.+
T Consensus 89 ~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g-~~~~f~~~~ 165 (382)
T PRK11128 89 FGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFG-EQAILWILT 165 (382)
T ss_pred HhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcC-hhHHHHHHH
Confidence 3457899999999999999888888877777776 4568888998888899999999999999998888 999998877
Q ss_pred HHHHHHHHHhhcccC
Q 018408 252 LPGFILALGMQFTVE 266 (356)
Q Consensus 252 ~~~~~~~~~~~~~~e 266 (356)
+..++..+..++.||
T Consensus 166 ~~~~~~~~~~~~~~~ 180 (382)
T PRK11128 166 AGVASMLLGQLLRPT 180 (382)
T ss_pred HHHHHHHHHHHccCC
Confidence 655544444444444
No 90
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.67 E-value=1.5e-14 Score=133.28 Aligned_cols=169 Identities=15% Similarity=0.094 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHhhhhcchhhHHH-HHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHH
Q 018408 90 LIASMSNFLFGYHIGVMNGPIVS-IAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (356)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 168 (356)
+.+....+........+.+.+|. +.+++|+ +..+.+++.+++.+++.+++++.|+++||+|||+.++.+....+++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~ 82 (396)
T TIGR00882 5 WMFGLFFFLYFFIMSAYFPFFPIWLHDVNGL--SKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLF 82 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 33344444444555556666654 4566888 67779999999999999999999999999999999988766665544
Q ss_pred HHHH---Hhh-----hHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCC
Q 018408 169 IISA---QAH-----SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP 240 (356)
Q Consensus 169 ~~~~---~~~-----~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 240 (356)
.... +.+ ....+++.+++.|++.+...+....+..+..+ +++...+.......+|..+++.+++.+.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~- 159 (396)
T TIGR00882 83 APFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFSI- 159 (396)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhcc-
Confidence 3321 111 23344566788888888777777777766533 345566777788889999999998877653
Q ss_pred chhHHHHHHhHHHHHHHHHHhhcc
Q 018408 241 HWWRTMLYIASLPGFILALGMQFT 264 (356)
Q Consensus 241 ~~w~~~~~~~~~~~~~~~~~~~~~ 264 (356)
+ |++.|++.++..++..+..++.
T Consensus 160 ~-~~~~f~~~~~~~~~~~~~~~~~ 182 (396)
T TIGR00882 160 D-PQIVFWLGSGFALILMLLLMFA 182 (396)
T ss_pred C-chHHHHHHHHHHHHHHHHHHHh
Confidence 5 9999999887777666554443
No 91
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.66 E-value=1.7e-14 Score=130.91 Aligned_cols=160 Identities=16% Similarity=0.155 Sum_probs=125.0
Q ss_pred hcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhh-----chhHHH-HHhHHHHHHHHHHHHHh---
Q 018408 104 GVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL-----GCRRTF-QIDTIPLILGAIISAQA--- 174 (356)
Q Consensus 104 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----Grr~~~-~~~~~~~~i~~~~~~~~--- 174 (356)
...++..|.+.+++|+ +..+.++.... .+...+ .+++|+++||+ ||||.+ +.+.++.+++....++.
T Consensus 5 ~~~~~~~~~~~~~~g~--s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~ 80 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNV--SLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPS 80 (356)
T ss_pred hhHHhHHHHHHHHcCC--CHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 3456677889999999 56668887654 344444 89999999998 899975 55677777776666666
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCc-------hhHHHH
Q 018408 175 HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH-------WWRTML 247 (356)
Q Consensus 175 ~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~-------~w~~~~ 247 (356)
.+.+.+.+..++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+....+ +||..|
T Consensus 81 ~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f 160 (356)
T TIGR00901 81 TDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIF 160 (356)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHH
Confidence 4555666677788888888889999999999999999999999999999999999999887776544 299999
Q ss_pred HHhHHHHHHHHHHhhc-ccCC
Q 018408 248 YIASLPGFILALGMQF-TVES 267 (356)
Q Consensus 248 ~~~~~~~~~~~~~~~~-~~e~ 267 (356)
++.++..++..+..++ .+|+
T Consensus 161 ~i~ai~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 161 FWTALLILPGLLVTLFLAKEP 181 (356)
T ss_pred HHHHHHHHHHHHHHHHhccCC
Confidence 9988877766655443 4554
No 92
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.65 E-value=7.1e-15 Score=139.02 Aligned_cols=165 Identities=17% Similarity=0.158 Sum_probs=127.1
Q ss_pred HHHHHHHHHHhhhhcchhhH-HHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhh-hchhHHHHHhHHHHHHHH
Q 018408 91 IASMSNFLFGYHIGVMNGPI-VSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK-LGCRRTFQIDTIPLILGA 168 (356)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~i~~ 168 (356)
.+.+..+...+..+.....+ .++.+++|+ +..+.+++.+.+........+++|+++|| +|||++++++.++.+++.
T Consensus 25 ~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~--s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~ 102 (500)
T PRK09584 25 LIFSIELWERFGYYGLQGIMAVYLVKQLGM--SEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGY 102 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 33344444444444444444 455688998 45556777777665555666789999999 599999999999999998
Q ss_pred HHHHHhh-hHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCc--cchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHH
Q 018408 169 IISAQAH-SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKY--RGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRT 245 (356)
Q Consensus 169 ~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~--r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~ 245 (356)
+++++++ +...++++++++|++.|...+....++.|++|+++ |..++++++.+.++|..++|.+++++.+..| |++
T Consensus 103 ~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g-~~~ 181 (500)
T PRK09584 103 ALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYG-WSV 181 (500)
T ss_pred HHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhC-HHH
Confidence 8888864 45667778999999999888888899999998653 4567888899999999999999999988888 999
Q ss_pred HHHHhHHHHHHHH
Q 018408 246 MLYIASLPGFILA 258 (356)
Q Consensus 246 ~~~~~~~~~~~~~ 258 (356)
.|++.++..+++.
T Consensus 182 ~F~i~~i~~~i~~ 194 (500)
T PRK09584 182 AFALSVVGMLITV 194 (500)
T ss_pred HHHHHHHHHHHHH
Confidence 9998776555544
No 93
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.65 E-value=2.1e-15 Score=117.43 Aligned_cols=135 Identities=21% Similarity=0.311 Sum_probs=118.8
Q ss_pred HHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCc
Q 018408 131 SIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKY 210 (356)
Q Consensus 131 ~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~ 210 (356)
+.+.++..++.++.|++.||+|||+.+..+..+..++.+.....++.+.+++.+++.|++.+...+....++.|.+|+++
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 84 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEE 84 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhh
Confidence 44567788999999999999999999999999999998888888999999999999999999999999999999999999
Q ss_pred cchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHhh-cccC
Q 018408 211 RGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQ-FTVE 266 (356)
Q Consensus 211 r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~-~~~e 266 (356)
|++.+++.+....+|..+++.+.+.+.+..+ |++.+++.++..++..+... +.||
T Consensus 85 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 85 RGVALGLMSAGIALGPLLGPPLGGVLAQFLG-WRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhHHHHHHHHhHHHHHHHhHHhHHHHhcccc-hHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999999888777 99998887777666655443 3444
No 94
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.64 E-value=1.5e-14 Score=134.62 Aligned_cols=169 Identities=14% Similarity=0.139 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHhhhhcchhhHHHH-HHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhh-chhHHHHHhHHHHHHH
Q 018408 90 LIASMSNFLFGYHIGVMNGPIVSI-AKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL-GCRRTFQIDTIPLILG 167 (356)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~i~ 167 (356)
+.+.+..+...+..+.....+|.+ .+++|+ +..+.+.+.+.+.....++.+++|+++||+ |||++++++.++.+++
T Consensus 12 ~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgl--s~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg 89 (493)
T PRK15462 12 YYVVALQIWEYFSFYGMRALLILYLTNQLKY--DDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIG 89 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHH
Confidence 333333344444444455555544 566788 566688889999999999999999999999 9999999999999999
Q ss_pred HHHHHHhh-hHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCC--ccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhH
Q 018408 168 AIISAQAH-SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTK--YRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWR 244 (356)
Q Consensus 168 ~~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~--~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~ 244 (356)
.++++... +...++++..+.+++.|...+...++++|.+|++ +|..+.++.+.+.++|+.++|.+.+++.+..| |+
T Consensus 90 ~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~G-w~ 168 (493)
T PRK15462 90 HVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYS-WA 168 (493)
T ss_pred HHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhC-hH
Confidence 87766543 2233444444555666666677788999999975 69999999999999999999999999988878 99
Q ss_pred HHHHHhHHHHHHHHHHh
Q 018408 245 TMLYIASLPGFILALGM 261 (356)
Q Consensus 245 ~~~~~~~~~~~~~~~~~ 261 (356)
+.|.++++..+++.+..
T Consensus 169 ~~F~iaaigm~l~li~~ 185 (493)
T PRK15462 169 MGFGLAAVGMIAGLVIF 185 (493)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99998776555544443
No 95
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.63 E-value=1.9e-14 Score=133.11 Aligned_cols=159 Identities=21% Similarity=0.141 Sum_probs=130.2
Q ss_pred chhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHH
Q 018408 106 MNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRF 185 (356)
Q Consensus 106 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 185 (356)
.....|.+.++.|. +..+.+.+.+.+.++..++.++.|+++||+|||+.+..+.+..+++.++..+.++.+.+++..+
T Consensus 239 ~~~~~p~~~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (406)
T PRK11551 239 LLNWLPSLLVGQGL--SRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGF 316 (406)
T ss_pred HHHHHHHHHHhCCC--ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 34456777777887 4555888899999999999999999999999999988877777777776677777777777788
Q ss_pred HHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHhhccc
Q 018408 186 LVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTV 265 (356)
Q Consensus 186 l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 265 (356)
+.|++.++..+....++.|.+|+++|++++|+.+....+|..++|.+++.+.++.++|...++..+...++..+..+++.
T Consensus 317 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK11551 317 AAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLLV 396 (406)
T ss_pred HHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 88988888888889999999999999999999999999999999999999988766577777776666666555554443
Q ss_pred C
Q 018408 266 E 266 (356)
Q Consensus 266 e 266 (356)
+
T Consensus 397 ~ 397 (406)
T PRK11551 397 S 397 (406)
T ss_pred c
Confidence 3
No 96
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.63 E-value=3.6e-14 Score=131.80 Aligned_cols=166 Identities=16% Similarity=0.090 Sum_probs=108.0
Q ss_pred HHHHHHHhhhhcchhhHH-HHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHH
Q 018408 94 MSNFLFGYHIGVMNGPIV-SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISA 172 (356)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~ 172 (356)
+..+......+...+.++ ++.+++|+ +..+.|++.+.+.+++.+++++.|+++||+|||++++++..+.+++.....
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~g~--s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~ 94 (420)
T PRK09528 17 LFFFFFFFIWSSWFSFFPIWLHDINGL--SGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFF 94 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 334444444444455555 44555898 677799999999999999999999999999999999887665554433221
Q ss_pred ---Hhh-----hHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhH
Q 018408 173 ---QAH-----SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWR 244 (356)
Q Consensus 173 ---~~~-----~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~ 244 (356)
..+ .....++++++.|.+.....+....+..+ . .++++..++....+..+|..+++.+++.+.+. + |+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~-~~ 170 (420)
T PRK09528 95 IYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFNI-N-PQ 170 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHhc-C-ch
Confidence 111 11112222333333333333333333322 2 24577788888888899999999999988764 5 89
Q ss_pred HHHHHhHHHHHHHHHHhhccc
Q 018408 245 TMLYIASLPGFILALGMQFTV 265 (356)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~ 265 (356)
+.|++.+++.++..+..++++
T Consensus 171 ~~f~~~~~~~~~~~~~~~~~~ 191 (420)
T PRK09528 171 INFWLGSGSALILLVLLFFAK 191 (420)
T ss_pred HhHHHHHHHHHHHHHHHhccc
Confidence 999988877776665555544
No 97
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.62 E-value=3.9e-15 Score=139.47 Aligned_cols=157 Identities=17% Similarity=0.186 Sum_probs=137.0
Q ss_pred hcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHH
Q 018408 104 GVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWG 183 (356)
Q Consensus 104 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 183 (356)
..++...+.+.++++.+ ..+.+|+.++....+.+..++.+.+.||+|.|.+.++|.++..++.++.+++++++.+++.
T Consensus 63 ~~~Gv~~~~~~~~f~~s--~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt 140 (509)
T KOG2504|consen 63 NSFGLLFEELMDYFGSS--SSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLT 140 (509)
T ss_pred heehhhHHHHHHHhCCC--ccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 34446678999999984 4448999999999999999999999999999999999999999999999999999888875
Q ss_pred -HHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHhh
Q 018408 184 -RFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQ 262 (356)
Q Consensus 184 -~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~ 262 (356)
-++.|+|.|..+......+..+|. ++|+.++|+...+..+|.++-|.+..++.+..| ||+.+++.+.+.+-.++...
T Consensus 141 ~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G-~r~~~l~~~~~~l~~~~~~~ 218 (509)
T KOG2504|consen 141 FGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYG-WRGALLIFGGISLNVLVAGA 218 (509)
T ss_pred HHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHH
Confidence 688999999999999989998875 569999999999999999999999999999999 99999987777665555444
Q ss_pred cc
Q 018408 263 FT 264 (356)
Q Consensus 263 ~~ 264 (356)
.+
T Consensus 219 ~~ 220 (509)
T KOG2504|consen 219 LL 220 (509)
T ss_pred Hc
Confidence 43
No 98
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.62 E-value=6.7e-14 Score=128.85 Aligned_cols=154 Identities=18% Similarity=0.144 Sum_probs=124.6
Q ss_pred hHH-HHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 018408 109 PIV-SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLV 187 (356)
Q Consensus 109 ~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~ 187 (356)
..| ++.+++|+ +..+.+++.+...++..++.++.|+++||+|||+.+..+.+...+........++.+.+++.+++.
T Consensus 238 ~~p~~l~~~~~~--~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 315 (393)
T PRK15011 238 NMPLFIINELHL--PEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLN 315 (393)
T ss_pred HHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 344 45567788 555678877777777888999999999999999988877666665555555567777777888888
Q ss_pred HhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHhhcccC
Q 018408 188 GLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVE 266 (356)
Q Consensus 188 G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e 266 (356)
+++.|...+....+..|.+|. +||+++++++....+|..+++.+++.+.++.+ |+..|++.+++.++..+..+++||
T Consensus 316 ~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 316 AIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWN-YHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHhhcC
Confidence 888877777777888999985 59999999988899999999999999988777 999999888888887777777765
No 99
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.61 E-value=3.1e-13 Score=124.40 Aligned_cols=170 Identities=14% Similarity=0.120 Sum_probs=123.5
Q ss_pred HHHHHHhhhhcchhhHH-HHHHHhCCCCChhHHHHHHHHH-HHHHHHHHHhHHhhhhhhchhHHHH-HhHHHHHHHHHHH
Q 018408 95 SNFLFGYHIGVMNGPIV-SIAKELGFEGNPILEGLVVSIF-IAGAFVGSISSGSLADKLGCRRTFQ-IDTIPLILGAIIS 171 (356)
Q Consensus 95 ~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~g~l~dr~Grr~~~~-~~~~~~~i~~~~~ 171 (356)
..+..+.......+.++ ++.+++|. +..+.|++.+.. .+++.++.+++++ +||+|||+.++ .+.++.+++..+.
T Consensus 23 ~~~~~~~~~~~~~p~~~~~l~~~~~~--s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~ 99 (393)
T PRK15011 23 VAFLTGIAGALQTPTLSIFLTDEVHA--RPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLF 99 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHH
Confidence 34555555555556555 46788898 566689887655 4466666766666 99999998754 5566666777777
Q ss_pred HHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccc--hhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHH
Q 018408 172 AQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRG--SLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYI 249 (356)
Q Consensus 172 ~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~--~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~ 249 (356)
+++++++.+++.+.+.|...+...+....+..++.+++.|. ...++.+.+.++|.+++|.+++.+.++.| ||..|++
T Consensus 100 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~g-w~~~f~~ 178 (393)
T PRK15011 100 AWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFS-FTVMYLS 178 (393)
T ss_pred HHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcC-hHHHHHH
Confidence 88889988776666655555566777788888877766553 44578888999999999999999988777 9999998
Q ss_pred hHHHHHHHHHH-hhcccCCh
Q 018408 250 ASLPGFILALG-MQFTVESP 268 (356)
Q Consensus 250 ~~~~~~~~~~~-~~~~~e~p 268 (356)
.++..++..+. ++++||.+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 179 AAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HHHHHHHHHHHHHhhcCccC
Confidence 87776655544 45577763
No 100
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.60 E-value=4.6e-13 Score=116.04 Aligned_cols=219 Identities=18% Similarity=0.185 Sum_probs=178.9
Q ss_pred HHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHH
Q 018408 92 ASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIIS 171 (356)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 171 (356)
+.+..+.--.......+.++.+.+++|+ +.+..|+++++..+...+.+++..+++.|+|.++.+..++++.+++.++-
T Consensus 17 Ivlia~NLR~~itsvgPLL~~Ir~~~gl--s~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR 94 (395)
T COG2807 17 IVLIAFNLRPAITSVGPLLDEIRQDLGL--SFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIR 94 (395)
T ss_pred HHHHHhccchhhhhhhhhHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 3333344444557788889999999999 56669999999999999999999999999999999999999999999998
Q ss_pred HHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhH
Q 018408 172 AQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIAS 251 (356)
Q Consensus 172 ~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~ 251 (356)
... +...++.+-.+.|.+.+..+...+..+-+.||++ -+..+|+|.+...+|+.+++.+...+.++.++||....+-+
T Consensus 95 ~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WA 172 (395)
T COG2807 95 SLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWA 172 (395)
T ss_pred hcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHH
Confidence 777 7788889999999999999999999999999865 78999999999999999999998888887755999999999
Q ss_pred HHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCccchhhhcccCcchhhHHHH
Q 018408 252 LPGFILALGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGD 331 (356)
Q Consensus 252 ~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 331 (356)
.++++.++.++.-... .+ + ...+.+..+...++++|.-|..++.+
T Consensus 173 l~allAl~~WlPq~~r-------~~-----------~-----------------~~~~~~~~~~~~vw~~~~aW~vtLfm 217 (395)
T COG2807 173 LLALLALLIWLPQALR-------EQ-----------A-----------------ASIATKLVSVRKVWRSPLAWQVTLFM 217 (395)
T ss_pred HHHHHHHHHHhhhccc-------cc-----------c-----------------cccccccccccccccCchhHHHHHHH
Confidence 9988887776532111 00 0 00001113445578999999999999
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 018408 332 GALASLLVGVTNFAGLRS 349 (356)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~ 349 (356)
.......+.++.|.+.+.
T Consensus 218 GlqS~~~Y~~~~WLP~il 235 (395)
T COG2807 218 GLQSLLYYIVIGWLPAIL 235 (395)
T ss_pred HhhHHHHHHHHHHHHHHH
Confidence 888888888888888765
No 101
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.60 E-value=2.2e-14 Score=130.76 Aligned_cols=147 Identities=17% Similarity=0.051 Sum_probs=122.6
Q ss_pred hHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhH--HHHHHHHHH
Q 018408 109 PIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSL--DEMLWGRFL 186 (356)
Q Consensus 109 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~l 186 (356)
..+.+.+++|. +..+.+++.+.+.++..++.++.|+++||+|||+.+.++.++.+++.++..+.++. ..+++..++
T Consensus 227 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (377)
T TIGR00890 227 LYKPYGQSLGL--SDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVAL 304 (377)
T ss_pred HHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHH
Confidence 34455677777 55568888999999999999999999999999999999988888888777666543 234456777
Q ss_pred HHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHH
Q 018408 187 VGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILA 258 (356)
Q Consensus 187 ~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~ 258 (356)
.|++.+...+..+.++.|.+|+++|++..|+.+....+|..++|.+.+.+.++.+ |++.|++.+++.++++
T Consensus 305 ~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 305 VFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIG-FEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhc-hhhHHHHHHHHHHHhc
Confidence 8888888878888899999999999999999999999999999999999988888 9999988777666543
No 102
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.59 E-value=1.1e-14 Score=134.97 Aligned_cols=160 Identities=14% Similarity=0.091 Sum_probs=126.8
Q ss_pred hhHHHHHHHhCCCC------ChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhh----hH
Q 018408 108 GPIVSIAKELGFEG------NPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH----SL 177 (356)
Q Consensus 108 ~~~~~~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~----~~ 177 (356)
...+.+.++.|.+. .....+...++..++.+++.++.|+++||+|||+++.++.++.+++..+..... ++
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~ 308 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGY 308 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhH
Confidence 33455555666432 123468888888889999999999999999999999999999888876666532 24
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhH-HHHHHHHHHHHHhhhccCCCCc-----hhHHHHHHhH
Q 018408 178 DEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQ-VGTCLGIITSLFLGIPAEDDPH-----WWRTMLYIAS 251 (356)
Q Consensus 178 ~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~-~~~~~g~~~~~~i~~~l~~~~~-----~w~~~~~~~~ 251 (356)
+.+++.+++.|++.+...+....++.|++|++.|++++|+.+ ....+|.+++|.+++.+.++.+ +|+..|++.+
T Consensus 309 ~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~ 388 (418)
T TIGR00889 309 ALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFA 388 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHH
Confidence 566778999999999888888999999999999999999997 6788999999999999887642 3999998877
Q ss_pred HHHHHHHH-HhhcccCC
Q 018408 252 LPGFILAL-GMQFTVES 267 (356)
Q Consensus 252 ~~~~~~~~-~~~~~~e~ 267 (356)
++.++..+ ..++++|+
T Consensus 389 ~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 389 GYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHhCCc
Confidence 77666554 45557765
No 103
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.59 E-value=1.2e-13 Score=124.57 Aligned_cols=161 Identities=25% Similarity=0.333 Sum_probs=140.0
Q ss_pred hhhhcchhhHHHHHHHh-CCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhH-HHHHhHHHHHHHHHHHHHhhhHH
Q 018408 101 YHIGVMNGPIVSIAKEL-GFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRR-TFQIDTIPLILGAIISAQAHSLD 178 (356)
Q Consensus 101 ~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~-~~~~~~~~~~i~~~~~~~~~~~~ 178 (356)
..........|.+.++. |. +..+.+++.+...++..++.++.+++.||+|||+ .+..+..+..++.+.....++.+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 266 (352)
T cd06174 189 FGYYGLLTYLPLYLQEVLGL--SAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLA 266 (352)
T ss_pred hHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHH
Confidence 33344444555555554 66 6667899999999999999999999999999999 99999999999999998888888
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHH
Q 018408 179 EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILA 258 (356)
Q Consensus 179 ~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~ 258 (356)
.+++..++.|++.+...+....++.|..|+++|++.+++.+....+|..+++.+.+.+.+..+ |+..+++.+++.++..
T Consensus 267 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~-~~~~~~~~~~~~~i~~ 345 (352)
T cd06174 267 LLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGG-YGGVFLILAALALLAA 345 (352)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-cchHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999988777 9999999888888777
Q ss_pred HHhhcc
Q 018408 259 LGMQFT 264 (356)
Q Consensus 259 ~~~~~~ 264 (356)
+..+++
T Consensus 346 i~~~~~ 351 (352)
T cd06174 346 LLLLLL 351 (352)
T ss_pred HHheec
Confidence 665443
No 104
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.58 E-value=1.1e-13 Score=127.56 Aligned_cols=156 Identities=17% Similarity=0.112 Sum_probs=128.6
Q ss_pred hhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 018408 107 NGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFL 186 (356)
Q Consensus 107 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 186 (356)
....+.+..+.|. +. .++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++..++
T Consensus 236 ~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (399)
T PRK05122 236 ATFITLYYAARGW--DG--AALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAAL 311 (399)
T ss_pred HHHHHHHHHHccc--cc--chHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 3444444455565 22 4556677888889999999999999999999998888888888888888888888888999
Q ss_pred HHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHhhcccC
Q 018408 187 VGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVE 266 (356)
Q Consensus 187 ~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e 266 (356)
.|++.+..++.....+.|.+|+++||++.++++....+|..+++.+.+.+.+..+ |++.+++.++..+++.+..+++++
T Consensus 312 ~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 312 TGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFG-YPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999998888888888899999999999999999999999999999999888877 999999888877777666555544
Q ss_pred C
Q 018408 267 S 267 (356)
Q Consensus 267 ~ 267 (356)
+
T Consensus 391 ~ 391 (399)
T PRK05122 391 R 391 (399)
T ss_pred c
Confidence 3
No 105
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.58 E-value=3.9e-14 Score=131.61 Aligned_cols=145 Identities=13% Similarity=0.021 Sum_probs=122.9
Q ss_pred ChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHH
Q 018408 122 NPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIY 201 (356)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~ 201 (356)
+..+.+++.++..++..++.+++|+++||+|||+.+.++.++.+++.++.+++++.+.+++.+++.|++.+...+....+
T Consensus 260 ~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 339 (420)
T PRK09528 260 GTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKY 339 (420)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44557888888889999999999999999999999999999999888888888899988889999999988888888889
Q ss_pred HHhhcCCCccchhHHH-hHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHh-hcccCC
Q 018408 202 ISEVAPTKYRGSLGTL-CQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGM-QFTVES 267 (356)
Q Consensus 202 ~~e~~p~~~r~~~~~~-~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e~ 267 (356)
+.|.+|++.|++..+. +++...+|.++++.+.+.+.+..| |+..|.+.+++.++..+.. ++.++.
T Consensus 340 ~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G-~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 340 ITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIG-FQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhC-chHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999987765 678889999999999999999888 9999998777666554433 334433
No 106
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.57 E-value=6.5e-14 Score=131.26 Aligned_cols=161 Identities=14% Similarity=0.092 Sum_probs=126.0
Q ss_pred HHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhh--hchhHHHHH--hHHHHHHHHHHHH
Q 018408 97 FLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK--LGCRRTFQI--DTIPLILGAIISA 172 (356)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr--~Grr~~~~~--~~~~~~i~~~~~~ 172 (356)
+............++.+.+++|+ +..+.+++.++..++..++.++.|+++|| +++|+...+ +.++.+++.++..
T Consensus 251 ~l~~~~~~~~~~~l~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~ 328 (455)
T TIGR00892 251 VIMFLGFFAPIIFLVPYAKDKGV--DEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCA 328 (455)
T ss_pred HHHHHHccchHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333444555666677888 56668899999999999999999999997 344443333 3344445555556
Q ss_pred HhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHH
Q 018408 173 QAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASL 252 (356)
Q Consensus 173 ~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~ 252 (356)
..++++.+++.+++.|++.+...+....++.|.+|++++++.+++++....+|.+++|.+++.+.+..++|++.|++.++
T Consensus 329 ~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~ 408 (455)
T TIGR00892 329 LAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGS 408 (455)
T ss_pred HhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhH
Confidence 67888888889999999999998999999999999999999999999999999999999999998877559999998887
Q ss_pred HHHHHHH
Q 018408 253 PGFILAL 259 (356)
Q Consensus 253 ~~~~~~~ 259 (356)
+.+++.+
T Consensus 409 ~~li~~~ 415 (455)
T TIGR00892 409 IVVSAGL 415 (455)
T ss_pred HHHHHHH
Confidence 7665554
No 107
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.57 E-value=1.8e-13 Score=128.79 Aligned_cols=172 Identities=17% Similarity=0.079 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHhhhhcchhhHH-HHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHH
Q 018408 89 VLIASMSNFLFGYHIGVMNGPIV-SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (356)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~ 167 (356)
++.+.+..+...........++| ++.+++|+ +..+.++..+...++..++.+++|+++||+|||+.++....+..++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~--s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~ 337 (467)
T PRK09556 260 IWLLCFANIFLYIVRIGIDNWSPVYAFQELGF--SKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALII 337 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 44444444444444334455566 45567888 5566888889999999999999999999999998876654444433
Q ss_pred HHH--HHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHH-HHHHHHHhhhccCC------
Q 018408 168 AII--SAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCL-GIITSLFLGIPAED------ 238 (356)
Q Consensus 168 ~~~--~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~-g~~~~~~i~~~l~~------ 238 (356)
..+ ....++...+++.+++.|++..+..........|.+|++.||++.|+.+....+ |..++|.+.|.+.+
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~ 417 (467)
T PRK09556 338 FTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGT 417 (467)
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccc
Confidence 322 223345656667788888655444444446777999999999999999888886 77999999999988
Q ss_pred ------CCchhHHHHHHhHHHHHHHHHHhhc
Q 018408 239 ------DPHWWRTMLYIASLPGFILALGMQF 263 (356)
Q Consensus 239 ------~~~~w~~~~~~~~~~~~~~~~~~~~ 263 (356)
..+ |+..|++.++..+++.+..++
T Consensus 418 ~~~~~~~~~-~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 418 PIFGYTLTG-WAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred ccccccccC-hHHHHHHHHHHHHHHHHHHHH
Confidence 455 999998887777776655443
No 108
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.56 E-value=4.7e-13 Score=122.22 Aligned_cols=151 Identities=19% Similarity=0.191 Sum_probs=123.8
Q ss_pred HHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhh
Q 018408 112 SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGI 191 (356)
Q Consensus 112 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~ 191 (356)
++.+++|. +..+.+++.+...+...++.++.|++.||+|||+.+.++.++..+........++.+.+++.+++.|++.
T Consensus 225 ~~~~~~g~--~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 302 (375)
T TIGR00899 225 LIIHELGL--PDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFI 302 (375)
T ss_pred HHHHHcCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567787 4555777777777777788899999999999999998887776666666666677888888889999998
Q ss_pred hhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHhhcccC
Q 018408 192 GVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVE 266 (356)
Q Consensus 192 g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e 266 (356)
+...+....++.|..|. ++++++++++....+|..++|.+++.+.+..+ |+..|++.++..+++.+...+++|
T Consensus 303 g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 303 GILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWS-YHAVYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHheecC
Confidence 88888888899999876 46799999999999999999999999888877 999999988888877776665543
No 109
>PRK12382 putative transporter; Provisional
Probab=99.55 E-value=2.4e-13 Score=125.08 Aligned_cols=152 Identities=12% Similarity=0.076 Sum_probs=127.2
Q ss_pred chhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHH
Q 018408 106 MNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRF 185 (356)
Q Consensus 106 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 185 (356)
.....+.+.++.+. +. .++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+.++...++++.+
T Consensus 235 ~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (392)
T PRK12382 235 IGTFVSLYFASKGW--AM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAA 310 (392)
T ss_pred HHHHHHHHHHhcCC--ch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 33444555556665 33 455666777888899999999999999999999998888888888777888888888899
Q ss_pred HHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHhh
Q 018408 186 LVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQ 262 (356)
Q Consensus 186 l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~ 262 (356)
+.|++.+...+.....+.|.+|+++||++.++++....+|..++|.+.+.+.++.+ |+..|++.++..++..+..+
T Consensus 311 l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 311 LTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFG-YPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-chHHHHHHHHHHHHHHHHHH
Confidence 99999988888888888999999999999999999999999999999999998888 99999998887777665544
No 110
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.53 E-value=7.4e-13 Score=121.44 Aligned_cols=155 Identities=12% Similarity=-0.008 Sum_probs=130.7
Q ss_pred hhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHH
Q 018408 103 IGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLW 182 (356)
Q Consensus 103 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 182 (356)
...+....|.+.+++|. +..+.|.+.+...++.+++.++.+++.||+|+|+.+.++.++.++..+..++.++.+.+++
T Consensus 221 ~~~~~~~~~~~l~~~g~--s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (382)
T TIGR00902 221 HAAYYGFSAIYWQAAGI--SASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFL 298 (382)
T ss_pred HHHHHHHHHHHHHHCCC--CHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHH
Confidence 33344455656677888 5666888888888889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhH-HHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHh
Q 018408 183 GRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQ-VGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGM 261 (356)
Q Consensus 183 ~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~-~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~ 261 (356)
.+++.|+..+...+....++.+. |+++|+++.++++ ....+|..+++.++|.+.++.+ + ..|++.+.+.+++.++.
T Consensus 299 ~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g-~-~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 299 LQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG-A-GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988 9999999999986 5788999999999999999887 6 55666666666555444
Q ss_pred h
Q 018408 262 Q 262 (356)
Q Consensus 262 ~ 262 (356)
.
T Consensus 376 ~ 376 (382)
T TIGR00902 376 P 376 (382)
T ss_pred H
Confidence 3
No 111
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.52 E-value=1.2e-12 Score=123.40 Aligned_cols=172 Identities=19% Similarity=0.138 Sum_probs=136.1
Q ss_pred HHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHH
Q 018408 91 IASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAII 170 (356)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 170 (356)
.++++.+....+..+.....+.+..+.. .++...+++..+..+-..+..+++|.++||++||++++.+-++.++..+.
T Consensus 14 ~lw~a~~iS~lG~~~~~va~~wlv~~lt--~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~ 91 (524)
T PF05977_consen 14 RLWIAQLISNLGDWMQTVALAWLVTQLT--GSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALL 91 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHH
Confidence 3444445555555555566666665553 37888999999999999999999999999999999999988777665554
Q ss_pred HHHh-----hhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHH
Q 018408 171 SAQA-----HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRT 245 (356)
Q Consensus 171 ~~~~-----~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~ 245 (356)
.++. .+.+.+++.-++.|++.+...|...+++.|+.|+++...++++.++..++...+||.++|.+....| -.+
T Consensus 92 L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G-~~~ 170 (524)
T PF05977_consen 92 LAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFG-AAA 170 (524)
T ss_pred HHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHH-HHH
Confidence 4332 3678888899999999999999999999999999999999999999999999999999999887766 677
Q ss_pred HHHHhHHHHHHHHHHhhccc
Q 018408 246 MLYIASLPGFILALGMQFTV 265 (356)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~ 265 (356)
.|.+.++..++.++.+..++
T Consensus 171 ~f~inalsfl~~i~~l~~~~ 190 (524)
T PF05977_consen 171 AFLINALSFLISILALLRWK 190 (524)
T ss_pred HHHHHHHHHHHHHHHHHHcc
Confidence 88877666555544444443
No 112
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.52 E-value=3.1e-13 Score=124.94 Aligned_cols=137 Identities=17% Similarity=0.156 Sum_probs=119.4
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhh
Q 018408 126 EGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEV 205 (356)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~ 205 (356)
.+.+.++..++..++.++.|+++||+|||+.+..+.++.+++.+...+.++.+.+++.+++.|++.+...+....++.+.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYN 339 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHh
Confidence 45566667788888999999999999999999999888888777777777888888889999999999989888899999
Q ss_pred cCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHhhc
Q 018408 206 APTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQF 263 (356)
Q Consensus 206 ~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~ 263 (356)
.|+++||+.+++++....+|..++|.+++.+.+..+ |++.|++.+++.++..+..++
T Consensus 340 ~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 340 SSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYG-FRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred CCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcc-hhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988888 999999988887777665443
No 113
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.52 E-value=1.4e-12 Score=121.05 Aligned_cols=177 Identities=12% Similarity=0.125 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhh----hhchhHHHHHh-HHHH
Q 018408 90 LIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLAD----KLGCRRTFQID-TIPL 164 (356)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~Grr~~~~~~-~~~~ 164 (356)
+.++...+...+......+..+.+.+++|. +....+++..+..+...+.+++.|+++| |+|||+.++++ .+..
T Consensus 7 i~~~~~~~Giq~~~~l~~~~l~~yl~~lg~--~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~ 84 (477)
T TIGR01301 7 LRVASVAAGVQFGWALQLSLLTPYVQELGI--PHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALV 84 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHH
Confidence 334444444445555566666667788998 6677999999999999999999999999 59999998874 6666
Q ss_pred HHHHHHHHHhhhHH-----------------HHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCcc--chhHHHhHHHHHHH
Q 018408 165 ILGAIISAQAHSLD-----------------EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYR--GSLGTLCQVGTCLG 225 (356)
Q Consensus 165 ~i~~~~~~~~~~~~-----------------~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r--~~~~~~~~~~~~~g 225 (356)
+++.++++++++.. .++++..+..++.+...+...++++|.+|+++| +.+.++.+....+|
T Consensus 85 ~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG 164 (477)
T TIGR01301 85 AFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIG 164 (477)
T ss_pred HHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHH
Confidence 66666776665532 223333445567777888889999999998865 57888899999999
Q ss_pred HHHHHHhhhccC--CC--------C----chhHHHHHHhHHHHHHHHH-HhhcccCCh
Q 018408 226 IITSLFLGIPAE--DD--------P----HWWRTMLYIASLPGFILAL-GMQFTVESP 268 (356)
Q Consensus 226 ~~~~~~i~~~l~--~~--------~----~~w~~~~~~~~~~~~~~~~-~~~~~~e~p 268 (356)
..+++.++++.. +. . .+.+..|++.++..++..+ ..++.+|.|
T Consensus 165 ~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 165 NVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 999999887541 10 0 1378899998877776654 455678865
No 114
>PRK09952 shikimate transporter; Provisional
Probab=99.51 E-value=2e-12 Score=120.72 Aligned_cols=154 Identities=16% Similarity=0.091 Sum_probs=112.9
Q ss_pred HHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHH---h-hhHHHHHHHHHHH
Q 018408 112 SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQ---A-HSLDEMLWGRFLV 187 (356)
Q Consensus 112 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~---~-~~~~~~~~~~~l~ 187 (356)
++.+.+|++ ......+.....+...++.++.|+++||+|||+++..+.++.+++.+.... . ++...+++..++.
T Consensus 276 y~~~~~g~s--~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 353 (438)
T PRK09952 276 YSTQNLGLP--RELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLA 353 (438)
T ss_pred HHHHhcCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHH
Confidence 445667874 333444445556667788899999999999999988887766555443322 1 2334444556677
Q ss_pred HhhhhhhhhHHHHHHHhhcCCCccchhHHHh-HHHHHHHHHHHHHhhhccCCCC-chhHHHHHHhHHHHHHHHHHhhccc
Q 018408 188 GLGIGVNTVLVPIYISEVAPTKYRGSLGTLC-QVGTCLGIITSLFLGIPAEDDP-HWWRTMLYIASLPGFILALGMQFTV 265 (356)
Q Consensus 188 G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~-~~~~~~g~~~~~~i~~~l~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~ 265 (356)
+++.+...+..+.+++|.+|++.|+.+.++. +.+..+|+.++|.+.+.+.+.. ++|...+.+.++..++..+..+.++
T Consensus 354 ~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~ 433 (438)
T PRK09952 354 NIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMK 433 (438)
T ss_pred HHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHcc
Confidence 8888888888899999999999999999984 5566689999999999987743 3488888888877777777766666
Q ss_pred CC
Q 018408 266 ES 267 (356)
Q Consensus 266 e~ 267 (356)
|+
T Consensus 434 ~~ 435 (438)
T PRK09952 434 DN 435 (438)
T ss_pred cc
Confidence 64
No 115
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.51 E-value=8.3e-13 Score=121.02 Aligned_cols=169 Identities=21% Similarity=0.147 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHhhhhcchhhHHHH-HHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhH--HHHH------h
Q 018408 90 LIASMSNFLFGYHIGVMNGPIVSI-AKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRR--TFQI------D 160 (356)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~--~~~~------~ 160 (356)
+...+..+.............|.+ .+.+|. +..+.+++.+...++..++.++.|+++||+|||+ .... +
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (399)
T TIGR00893 218 WGLALGQFLVNIGLGFFLTWFPTYLVQERGL--SILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIA 295 (399)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhcc--cHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHH
Confidence 333333444444444445555544 456777 5566888899999999999999999999999996 1111 1
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCC
Q 018408 161 TIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP 240 (356)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 240 (356)
.++..+........++....+...++.+++.+ ..+....++.|.+|+++|++++++.+....+|..++|.+.+.+.+..
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~ 374 (399)
T TIGR00893 296 GLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATT 374 (399)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCC
Confidence 11111111111112233333333334444444 77888999999999999999999999999999999999999999877
Q ss_pred chhHHHHHHhHHHHHHHHHHh
Q 018408 241 HWWRTMLYIASLPGFILALGM 261 (356)
Q Consensus 241 ~~w~~~~~~~~~~~~~~~~~~ 261 (356)
++|+..+++.++..++..+..
T Consensus 375 g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 375 GSFAGALMVVAALALIGALSY 395 (399)
T ss_pred CchhHHHHHHHHHHHHHHHHH
Confidence 668888888777766665544
No 116
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.51 E-value=1.4e-12 Score=124.01 Aligned_cols=162 Identities=18% Similarity=0.078 Sum_probs=108.7
Q ss_pred chhhHHHHHHHhCCCCChhH----------HHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhh
Q 018408 106 MNGPIVSIAKELGFEGNPIL----------EGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH 175 (356)
Q Consensus 106 ~~~~~~~~~~~~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~ 175 (356)
.....|.+.++.|++.+... ......+..++.+++.++.++++||+|||+.++++.++.+++.++.++..
T Consensus 307 ~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~ 386 (502)
T TIGR00887 307 VNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAY 386 (502)
T ss_pred cccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 34446777788887533110 01123344456677889999999999999999888877777766555432
Q ss_pred h----HHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCc---------h
Q 018408 176 S----LDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH---------W 242 (356)
Q Consensus 176 ~----~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~---------~ 242 (356)
+ ...+...-+...++..+..+..+.+.+|.+|++.|+++.++.+....+|+++++.+.+.+.+..+ +
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 466 (502)
T TIGR00887 387 NHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIW 466 (502)
T ss_pred HhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccccccccccccc
Confidence 1 11111111112222223455677788999999999999999999999999999999998877421 1
Q ss_pred hHHHHHHhHHHHHHHHHHhhcccCC
Q 018408 243 WRTMLYIASLPGFILALGMQFTVES 267 (356)
Q Consensus 243 w~~~~~~~~~~~~~~~~~~~~~~e~ 267 (356)
+...|++.++..++..+..+++||+
T Consensus 467 ~~~~~~i~~~~~~~~~i~~~~lpEt 491 (502)
T TIGR00887 467 MGHVLEIFALFMFLGILFTLLIPET 491 (502)
T ss_pred chHHHHHHHHHHHHHHHHheEeccC
Confidence 4556676666666666666778998
No 117
>PRK03699 putative transporter; Provisional
Probab=99.51 E-value=1.3e-12 Score=120.40 Aligned_cols=159 Identities=11% Similarity=0.008 Sum_probs=127.0
Q ss_pred hcchhhHHHHH-HHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHH
Q 018408 104 GVMNGPIVSIA-KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLW 182 (356)
Q Consensus 104 ~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 182 (356)
..+..+.|.+. +.+|+ +..+.+++.+.+.++..++.++.|+++||+|||+.+.....+.++...+....++...+.+
T Consensus 222 ~~~~~~~p~~l~~~~g~--s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (394)
T PRK03699 222 LTFISWVPEYAQKKFGM--SLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLY 299 (394)
T ss_pred HHHHHHHHHHHHHHcCC--ChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHH
Confidence 33445566555 66788 5556888999999999999999999999999999998887777776666666777777777
Q ss_pred HHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHhh
Q 018408 183 GRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQ 262 (356)
Q Consensus 183 ~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~ 262 (356)
..++.|++.++.++....+..|..| +.++...+....+..+|..++|.+.+.+.+..+ ++..+++.+++.+++.+...
T Consensus 300 ~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 377 (394)
T PRK03699 300 AILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFG-LQAALLTANGLYAVVFVMCI 377 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhC-chhhhhhhHHHHHHHHHHHH
Confidence 7888899888888888878888776 446788888888889999999999999998888 89998887777777765555
Q ss_pred cccC
Q 018408 263 FTVE 266 (356)
Q Consensus 263 ~~~e 266 (356)
++++
T Consensus 378 ~~~~ 381 (394)
T PRK03699 378 LLGF 381 (394)
T ss_pred HHHH
Confidence 5543
No 118
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.51 E-value=1e-12 Score=121.31 Aligned_cols=158 Identities=16% Similarity=0.086 Sum_probs=118.2
Q ss_pred hhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHH-HhHHHHHHHHHHHHH-----hh
Q 018408 102 HIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQ-IDTIPLILGAIISAQ-----AH 175 (356)
Q Consensus 102 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~-~~~~~~~i~~~~~~~-----~~ 175 (356)
.........|.+.+++|+ +..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+.... .+
T Consensus 237 ~~~~~~~~~p~~~~~~g~--s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~ 314 (402)
T TIGR00897 237 GLFGFAVFLPMFVAELGF--STSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGH 314 (402)
T ss_pred HHHHHHHHHHHHHHHcCC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 333445566777788888 4555788888889999999999999999999988764 333333443333322 23
Q ss_pred hHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHH
Q 018408 176 SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGF 255 (356)
Q Consensus 176 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~ 255 (356)
+.+.+++..++.|++.+...+. ...+.|..| ++||+++|+.+....+|..++|.+++.+.+..| |...+++.++..+
T Consensus 315 ~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g-~~~~~~~~a~~~~ 391 (402)
T TIGR00897 315 SFAVALIIAIALGIFLAGYVPL-AAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFG-AIGVVWIFAALYV 391 (402)
T ss_pred cHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hHHHHHHHHHHHH
Confidence 5566667788888888766443 456677655 589999999999999999999999999999888 8899998888877
Q ss_pred HHHHHhhcc
Q 018408 256 ILALGMQFT 264 (356)
Q Consensus 256 ~~~~~~~~~ 264 (356)
+..+..+|+
T Consensus 392 i~~~~~~~~ 400 (402)
T TIGR00897 392 VSAFLTAFI 400 (402)
T ss_pred HHHHHHHHh
Confidence 776666554
No 119
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.50 E-value=2.6e-12 Score=121.47 Aligned_cols=160 Identities=17% Similarity=0.090 Sum_probs=113.2
Q ss_pred cchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhh--hH-H-HH
Q 018408 105 VMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH--SL-D-EM 180 (356)
Q Consensus 105 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~--~~-~-~~ 180 (356)
......|.+.++.|.+.. ...+......++..++.+++|+++||+|||+.++.+.++.+++.++++... +. . ..
T Consensus 289 ~~~~~~p~i~~~~g~~~~--~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~ 366 (479)
T PRK10077 289 VVLYYAPEIFKTLGASTD--IALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVA 366 (479)
T ss_pred HHHHHHHHHHHHcCCCCc--hHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHH
Confidence 344556788888888533 355666667778889999999999999999999999999888887765432 11 1 22
Q ss_pred HHHHHHHHhhhhh-hhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhh------ccCCCCchhHHHHHHhHHH
Q 018408 181 LWGRFLVGLGIGV-NTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGI------PAEDDPHWWRTMLYIASLP 253 (356)
Q Consensus 181 ~~~~~l~G~~~g~-~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~------~l~~~~~~w~~~~~~~~~~ 253 (356)
+++.++.+++.+. ..+..+.+++|.+|+++|++++|+.+....+|.++++.+.+ ++.+..+ |++.|++.++.
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~ 445 (479)
T PRK10077 367 LLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFH-NGFSYWIYGCM 445 (479)
T ss_pred HHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhcc-CccHHHHHHHH
Confidence 2333444444433 33667889999999999999999998888888887765544 3334556 77778877666
Q ss_pred HHHHHHHh-hcccCC
Q 018408 254 GFILALGM-QFTVES 267 (356)
Q Consensus 254 ~~~~~~~~-~~~~e~ 267 (356)
.++.+++. ++.||+
T Consensus 446 ~~~~~~~~~~~~~e~ 460 (479)
T PRK10077 446 GVLAALFMWKFVPET 460 (479)
T ss_pred HHHHHHHHHhccccC
Confidence 66555443 456776
No 120
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.49 E-value=8.5e-13 Score=124.21 Aligned_cols=176 Identities=14% Similarity=-0.004 Sum_probs=127.9
Q ss_pred HHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHH
Q 018408 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (356)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 168 (356)
++...+..+.............|.+.+++|++. ...++......++..++.++.|+++||+|||+.+.++.++.+++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 363 (481)
T TIGR00879 286 FLGVVLQWFQQFTGINAIMYYSPTIFENAGVST--DHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICL 363 (481)
T ss_pred HHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCc--hHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 333344444444444455566788888889854 457788888889999999999999999999999999888877777
Q ss_pred HHHHHh-----h------hHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccC
Q 018408 169 IISAQA-----H------SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAE 237 (356)
Q Consensus 169 ~~~~~~-----~------~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 237 (356)
++.++. + +...++...++.+....+..+....++.|.+|++.|++++++.+....+|.++++.+.+.+.
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~ 443 (481)
T TIGR00879 364 FVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTML 443 (481)
T ss_pred HHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666521 1 22223333333333333344666778899999999999999999999999999999999888
Q ss_pred CCCchhHHHHHHhHHHHHHHHHHh-hcccCC
Q 018408 238 DDPHWWRTMLYIASLPGFILALGM-QFTVES 267 (356)
Q Consensus 238 ~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e~ 267 (356)
++.+ |++.|++.++++++..++. ++.||+
T Consensus 444 ~~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 444 ESIG-VGGVFIFFGGLNVLGLIFVYFFLPET 473 (481)
T ss_pred HhcC-ccceehhHHHHHHHHHHHHheecccC
Confidence 8777 9988888877777666554 446665
No 121
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.49 E-value=5.1e-13 Score=122.51 Aligned_cols=157 Identities=17% Similarity=0.148 Sum_probs=116.3
Q ss_pred HHHHhhhhcchhhHHHHH-HHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHH--HHHH
Q 018408 97 FLFGYHIGVMNGPIVSIA-KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAI--ISAQ 173 (356)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~--~~~~ 173 (356)
+.............|.+. +++|. +..+.+.+.+...++..++.++.|+++||+|||+.+..+..+..+..+ ...+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~ 306 (394)
T TIGR00883 229 IATTTTFYLITTYLPTYLTQTLGL--SANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMAL 306 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333334444555554 66787 455578888888999999999999999999999987765544443331 2222
Q ss_pred --hhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHH-hHHHHHHHHHHHHHhhhccCCCCchhHHHHHHh
Q 018408 174 --AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTL-CQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIA 250 (356)
Q Consensus 174 --~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~-~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~ 250 (356)
.++.+.+++..++.|++.+...+....++.|.+|+++|++++++ ++.+..+|..++|.+++.+.++.+.|++.+++.
T Consensus 307 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~ 386 (394)
T TIGR00883 307 LDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYL 386 (394)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHH
Confidence 24566666778888998888889999999999999999999998 567778899999999999988776577776665
Q ss_pred HHHHH
Q 018408 251 SLPGF 255 (356)
Q Consensus 251 ~~~~~ 255 (356)
++..+
T Consensus 387 ~~~~l 391 (394)
T TIGR00883 387 AALAL 391 (394)
T ss_pred HHHHH
Confidence 54443
No 122
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.49 E-value=2.2e-12 Score=118.73 Aligned_cols=161 Identities=12% Similarity=0.072 Sum_probs=122.3
Q ss_pred hcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhh-hHHHHHH
Q 018408 104 GVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH-SLDEMLW 182 (356)
Q Consensus 104 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~-~~~~~~~ 182 (356)
.......|.+.+++|. +..+.+...+.+.++..++.++.|++.||+|||+.+..+..+..++.++....+ +...+
T Consensus 222 ~~~~~~lp~~l~~~g~--s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-- 297 (393)
T PRK09705 222 ASLIAWLPAFYIEIGA--SAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL-- 297 (393)
T ss_pred HHHHHHHHHHHHHcCC--ChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH--
Confidence 3344455666666787 556688999999999999999999999999999999888877777766554333 22222
Q ss_pred HHHHHHhhhhhhhhHHHHHHHhhcC-CCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHH-
Q 018408 183 GRFLVGLGIGVNTVLVPIYISEVAP-TKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALG- 260 (356)
Q Consensus 183 ~~~l~G~~~g~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~- 260 (356)
..++.|++.+...+.......+.++ +++|++..++.+....++..++|.+.+++.+..|+|...|++.++..++..+.
T Consensus 298 ~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 377 (393)
T PRK09705 298 WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIIT 377 (393)
T ss_pred HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Confidence 2345677777777777766677775 57899999999999999999999999999998877888888877666655544
Q ss_pred hhcccCCh
Q 018408 261 MQFTVESP 268 (356)
Q Consensus 261 ~~~~~e~p 268 (356)
..+.||++
T Consensus 378 ~~~~~~~~ 385 (393)
T PRK09705 378 LRFAPARF 385 (393)
T ss_pred HHhccccc
Confidence 45567764
No 123
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.48 E-value=9.6e-12 Score=115.34 Aligned_cols=166 Identities=17% Similarity=0.092 Sum_probs=113.5
Q ss_pred HHHHHHHHhhhhcchhhH-HHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhch-hHHHHHhHHHHHHHHHH
Q 018408 93 SMSNFLFGYHIGVMNGPI-VSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGC-RRTFQIDTIPLILGAII 170 (356)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~~~~~~~i~~~~ 170 (356)
++..+.+....+...+.+ +++.+++|+ +..+.|++.+++.++..++++++|.++||+|| |+++.++.++..++..+
T Consensus 8 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~--s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~ 85 (418)
T TIGR00889 8 KFMSFLQWFIWGSWLVTLGSYMSKTLHF--SGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFF 85 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 344444445555554444 566677888 67779999999999999999999999999965 77888888888888888
Q ss_pred HHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHH--------hhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCch
Q 018408 171 SAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYIS--------EVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHW 242 (356)
Q Consensus 171 ~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~--------e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~ 242 (356)
..+.++++.+++.|++.|++.+...+...+... |......|.+..| .+|.++++.+++.+.....
T Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~- 158 (418)
T TIGR00889 86 AAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELS- 158 (418)
T ss_pred HHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccch-
Confidence 888889999999999999977666555444321 2222223444444 3567777777776633222
Q ss_pred hHHHHHHhHHHHHHHHHHhhcccCCh
Q 018408 243 WRTMLYIASLPGFILALGMQFTVESP 268 (356)
Q Consensus 243 w~~~~~~~~~~~~~~~~~~~~~~e~p 268 (356)
|.. |++.++..++..+..+++||+|
T Consensus 159 ~~~-f~~~~~~~~~~~~~~~~~~e~~ 183 (418)
T TIGR00889 159 NIQ-LYITAGSSALLGVFALTLPDIP 183 (418)
T ss_pred hHH-HHHHHHHHHHHHHHHhcCCCCC
Confidence 543 4455555555555566778764
No 124
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.47 E-value=4.3e-13 Score=118.56 Aligned_cols=174 Identities=17% Similarity=0.158 Sum_probs=138.4
Q ss_pred hHHHHHHHHHHHHHHHhhhhcchhhHH-HHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhh--chhHHHHHhH
Q 018408 85 AFPHVLIASMSNFLFGYHIGVMNGPIV-SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL--GCRRTFQIDT 161 (356)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--Grr~~~~~~~ 161 (356)
+.+.++.++++++........+..+.| ++.|..|+ +...+++..+.+-++.+.|.+++|+++||+ |||....+.+
T Consensus 250 ~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~--s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~ 327 (448)
T COG2271 250 KNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGF--SLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIF 327 (448)
T ss_pred cChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCC--CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHH
Confidence 345688888888888877777777776 45566788 455588999999999999999999999996 7887665544
Q ss_pred -HHHHHHHHHHHHhh--hHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHH-HHHHHHHhhhccC
Q 018408 162 -IPLILGAIISAQAH--SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCL-GIITSLFLGIPAE 237 (356)
Q Consensus 162 -~~~~i~~~~~~~~~--~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~-g~~~~~~i~~~l~ 237 (356)
++..++.+....++ |+....++.+++|+...+..-.......|..|++--|++.|+...+..+ |..++....+.+.
T Consensus 328 ~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~ 407 (448)
T COG2271 328 MLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIA 407 (448)
T ss_pred HHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeE
Confidence 33334434444444 5678888899999998888888888899999999999999999988888 9999999999998
Q ss_pred CCCchhHHHHHHhHHHHHHHHHHh
Q 018408 238 DDPHWWRTMLYIASLPGFILALGM 261 (356)
Q Consensus 238 ~~~~~w~~~~~~~~~~~~~~~~~~ 261 (356)
|..| |...|++..+.++++.++.
T Consensus 408 d~~g-W~g~Fi~~~~~a~l~~lll 430 (448)
T COG2271 408 DTWG-WDGGFIVLSIAALLAILLL 430 (448)
T ss_pred ecCC-CcchHHHHHHHHHHHHHHH
Confidence 8877 9999998777776665543
No 125
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.47 E-value=7.3e-13 Score=125.77 Aligned_cols=144 Identities=20% Similarity=0.102 Sum_probs=110.3
Q ss_pred hhhHHHHH-HHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHh--hhHHHHHHH
Q 018408 107 NGPIVSIA-KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA--HSLDEMLWG 183 (356)
Q Consensus 107 ~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~ 183 (356)
...+|.+. +++|+ +..+.+++.+.+.++..++.++.|+++||+|||+++.++.++..+..++.... .+.+.+.+.
T Consensus 295 ~~~lp~~l~~~~g~--~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (496)
T PRK03893 295 QALLPTYLKTDLGY--DPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLL 372 (496)
T ss_pred HHHHHHHHHhhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHH
Confidence 34556555 57888 56678999999999999999999999999999999888877666665544333 233344444
Q ss_pred HHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHH
Q 018408 184 RFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLP 253 (356)
Q Consensus 184 ~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~ 253 (356)
.++.++...+..+..+.++.|.+|+++||+.+++.+....+|..++|.+++.+.++.+ |+..+...+..
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g-~~~~~~~~~~~ 441 (496)
T PRK03893 373 LFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLD-LGTALASLSFS 441 (496)
T ss_pred HHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCC-hHHHHHHHHHH
Confidence 4544444444456677889999999999999999999999999999999999999888 88777654433
No 126
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.47 E-value=3.6e-12 Score=116.88 Aligned_cols=151 Identities=14% Similarity=0.153 Sum_probs=119.9
Q ss_pred hhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 018408 107 NGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFL 186 (356)
Q Consensus 107 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 186 (356)
...+|.+.++.|. +....++..+...++..++.++.|+++||+|+|+.+..+.++.+++.+... . ....+...++
T Consensus 220 ~~~lp~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l 294 (381)
T PRK03633 220 YGLMPLYLNHQGM--SDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFI 294 (381)
T ss_pred HHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHH
Confidence 3456777777777 555688888889999999999999999999999999888777777655443 2 2333456677
Q ss_pred HHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHhhc
Q 018408 187 VGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQF 263 (356)
Q Consensus 187 ~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~ 263 (356)
.|++.+...+....++.|..|+++++...+.++....+|.+++|.+++.+.++.+ |++.|.+.+.+.++..+..+.
T Consensus 295 ~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 295 LGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYS-DNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHh
Confidence 7877777788888889999998888888888888999999999999999999888 899998877777666554443
No 127
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.45 E-value=7.5e-12 Score=116.79 Aligned_cols=177 Identities=16% Similarity=0.090 Sum_probs=141.9
Q ss_pred HHHHHHHHHHHHhhhhcchhhH-HHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchh--HHHHHhHHHHH
Q 018408 89 VLIASMSNFLFGYHIGVMNGPI-VSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCR--RTFQIDTIPLI 165 (356)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr--~~~~~~~~~~~ 165 (356)
++...+++++..-+.+.+.... .+..+++|+ +..+...+..+..+..++|++++|++.||+|.| ++++++.+++.
T Consensus 283 ~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~--s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~ 360 (477)
T PF11700_consen 283 LFLFLIAYFLYSDGVNTIISFAGIYATEVLGM--STTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWI 360 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHH
Confidence 4444444444333333333333 345568999 555577778888899999999999999999999 88888887776
Q ss_pred HHHHHHHH--------hhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccC
Q 018408 166 LGAIISAQ--------AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAE 237 (356)
Q Consensus 166 i~~~~~~~--------~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 237 (356)
+..+...+ .++.+.+.+.-++.|++.|..++..-++.+|+.|+.+.+..+|++.+..-..+.+||++.+.+.
T Consensus 361 ~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~ 440 (477)
T PF11700_consen 361 IIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLIT 440 (477)
T ss_pred HHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66655555 5677889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHhHHHHHHHHHHhhcccCC
Q 018408 238 DDPHWWRTMLYIASLPGFILALGMQFTVES 267 (356)
Q Consensus 238 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~ 267 (356)
+..++-|+.+....++.+++++++++++..
T Consensus 441 ~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 441 DATGSQRYGFLFLLVLFLIGLILLFFVDVE 470 (477)
T ss_pred HHhCCchhHHHHHHHHHHHHHHHHhhccch
Confidence 988878888888888888887777666543
No 128
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.45 E-value=2.4e-12 Score=118.69 Aligned_cols=137 Identities=21% Similarity=0.177 Sum_probs=109.8
Q ss_pred HHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHH-HHHHhhhHHHHHHHHHHHHh
Q 018408 111 VSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAI-ISAQAHSLDEMLWGRFLVGL 189 (356)
Q Consensus 111 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~l~G~ 189 (356)
+++.+++|+ +..+.+++.+...++..++.++.|++.||+|||+.+.++.++.++..+ .....++.+.+.+..++.|+
T Consensus 263 ~~~~~~~g~--s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (405)
T TIGR00891 263 TYLKADLGL--SPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQM 340 (405)
T ss_pred HHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 345567788 566688999999999999999999999999999998887766544333 33334555666666677777
Q ss_pred hhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHH
Q 018408 190 GIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYI 249 (356)
Q Consensus 190 ~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~ 249 (356)
+.++..+..+.++.|.+|+++|++++|+.+....+|..++|.+.+.+.++.|.|+..+..
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 341 LVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 777777888889999999999999999999999999999999999999887656655444
No 129
>PRK03545 putative arabinose transporter; Provisional
Probab=99.45 E-value=1e-11 Score=114.18 Aligned_cols=148 Identities=13% Similarity=0.098 Sum_probs=116.3
Q ss_pred HHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHH-HHHHhhhHHHHHHHHHHHH
Q 018408 110 IVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAI-ISAQAHSLDEMLWGRFLVG 188 (356)
Q Consensus 110 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~l~G 188 (356)
.+.+.+.+|.+ ....+++.+...++..++.++.|+++||+|||.... +..+..++.. .....++.+.++++.++.|
T Consensus 229 ~~~l~~~~g~s--~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g 305 (390)
T PRK03545 229 EPFVQQVAGLS--ENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWG 305 (390)
T ss_pred HHHHHHhcCCC--ccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 34556667874 455888888899999999999999999999887544 4444444433 3345667777888888899
Q ss_pred hhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHhh
Q 018408 189 LGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQ 262 (356)
Q Consensus 189 ~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~ 262 (356)
++.+...+.....+.+..| +.|++++++++....+|..+|+.+++.+.++.+ ++..|++.+++.+++.+...
T Consensus 306 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g-~~~~~~~~~~~~~~~~~~~~ 377 (390)
T PRK03545 306 IAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLG-LSSIGYVGAALALAALVWSI 377 (390)
T ss_pred HHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hhHHHHHHHHHHHHHHHHHH
Confidence 9887776777778888876 678999999999999999999999999999988 99999998877777665443
No 130
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.44 E-value=8e-12 Score=117.22 Aligned_cols=156 Identities=14% Similarity=0.058 Sum_probs=105.8
Q ss_pred cchhhHHHHHH-HhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhh--chhHHHH-HhHHHHHHHHHHHHH--hhhHH
Q 018408 105 VMNGPIVSIAK-ELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL--GCRRTFQ-IDTIPLILGAIISAQ--AHSLD 178 (356)
Q Consensus 105 ~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--Grr~~~~-~~~~~~~i~~~~~~~--~~~~~ 178 (356)
....++|.+.+ +.|+ +..+.+++...+.++..++.++.|+++||+ |||+... ....+..++.++... ..+..
T Consensus 271 ~~~~~~P~~l~~~~g~--s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 348 (452)
T PRK11273 271 GILDWSPTYLKEVKHF--ALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPT 348 (452)
T ss_pred HHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChH
Confidence 34445665554 4688 445578888888899999999999999999 5554322 222333333332222 23444
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHH-HHHhhhccCCCCchhHHHHHHhHHHHHHH
Q 018408 179 EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIIT-SLFLGIPAEDDPHWWRTMLYIASLPGFIL 257 (356)
Q Consensus 179 ~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~-~~~i~~~l~~~~~~w~~~~~~~~~~~~~~ 257 (356)
..+++.++.|.+..........+..|.+|++.||+++|+.+....+|+.+ +|.+.+.+.++.| |+..|++.++.++++
T Consensus 349 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g-~~~~f~~~~~~~~~~ 427 (452)
T PRK11273 349 VDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILA 427 (452)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc-chHHHHHHHHHHHHH
Confidence 44445555565443333344456789999999999999998888887654 7999999999888 999999887777776
Q ss_pred HHHhhc
Q 018408 258 ALGMQF 263 (356)
Q Consensus 258 ~~~~~~ 263 (356)
++....
T Consensus 428 ~~~~~~ 433 (452)
T PRK11273 428 VILLIV 433 (452)
T ss_pred HHHHHH
Confidence 655444
No 131
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.44 E-value=4.5e-12 Score=117.70 Aligned_cols=158 Identities=15% Similarity=0.034 Sum_probs=128.5
Q ss_pred hhhHHHHHHH-hCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHH
Q 018408 107 NGPIVSIAKE-LGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRF 185 (356)
Q Consensus 107 ~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 185 (356)
....|.+.++ +|. +....+++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+.++...++++.+
T Consensus 243 ~~~~p~~~~~~~g~--~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (417)
T PRK10489 243 RVLYPALADEVWQM--GAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLA 320 (417)
T ss_pred HHhhHHHHHhccCC--ChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 3445655555 788 4556889999999999999999999999988888888888888888877777888877788888
Q ss_pred HHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHH-HHHHHHhhcc
Q 018408 186 LVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPG-FILALGMQFT 264 (356)
Q Consensus 186 l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~-~~~~~~~~~~ 264 (356)
+.|++.+...+...+++.|..|++.||+++++++....+|..+++.+.+.+.+..+ ++..+++.++.. +++.+....+
T Consensus 321 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 399 (417)
T PRK10489 321 LFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT-PVASASASGFGLLIIGVLLLLVL 399 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc-hhhHHHHHHHHHHHHHHHHHHhc
Confidence 99998888878888899999999999999999999999999999999999998877 666666655444 4445555556
Q ss_pred cCC
Q 018408 265 VES 267 (356)
Q Consensus 265 ~e~ 267 (356)
++.
T Consensus 400 ~~~ 402 (417)
T PRK10489 400 GEL 402 (417)
T ss_pred ccc
Confidence 665
No 132
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.44 E-value=1.8e-11 Score=112.61 Aligned_cols=176 Identities=10% Similarity=-0.010 Sum_probs=127.9
Q ss_pred HHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHH--HHHHHHHHHHHHhH-HhhhhhhchhHHHHHhHHHH-
Q 018408 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVV--SIFIAGAFVGSISS-GSLADKLGCRRTFQIDTIPL- 164 (356)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~-g~l~dr~Grr~~~~~~~~~~- 164 (356)
.+.+...++..+...+...+.+|.+.++.|. +..+.|++. +...+...+..++. ++..||+||||.+++...+.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~--~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGA--PLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHH
Confidence 4556667788888888899999999999998 666788863 55566676777777 55789999999876655332
Q ss_pred HHHHHHHH-H--hhh-HHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCC
Q 018408 165 ILGAIISA-Q--AHS-LDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP 240 (356)
Q Consensus 165 ~i~~~~~~-~--~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 240 (356)
++.....+ + ..+ ...++...++.++..+...+....+..|..+.++++...+....+..+|..+++...+++.++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~ 160 (390)
T TIGR02718 81 SACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKF 160 (390)
T ss_pred HHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22222222 1 222 2333444555666677777777878889888888888888888888999999998888888888
Q ss_pred chhHHHHHHhHHHHHHHHHHhhcccCC
Q 018408 241 HWWRTMLYIASLPGFILALGMQFTVES 267 (356)
Q Consensus 241 ~~w~~~~~~~~~~~~~~~~~~~~~~e~ 267 (356)
+ |+..|++.++..++..+..++++|+
T Consensus 161 g-w~~~f~~~a~l~~~~~~~~~~~~~~ 186 (390)
T TIGR02718 161 G-QRPAFLLVACVPLASLVCVLWLKDR 186 (390)
T ss_pred C-HHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 8 9999999888777666555555543
No 133
>TIGR00895 2A0115 benzoate transport.
Probab=99.43 E-value=5.9e-12 Score=115.70 Aligned_cols=133 Identities=21% Similarity=0.171 Sum_probs=105.8
Q ss_pred hhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHH
Q 018408 102 HIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEML 181 (356)
Q Consensus 102 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~ 181 (356)
.........|.+.+++|. +..+.+++.+...++..++.++.|+++||+|||+.+....+...+..++.....+...++
T Consensus 265 ~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (398)
T TIGR00895 265 GVYFLTNWLPKLMVELGF--SLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLL 342 (398)
T ss_pred HHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHH
Confidence 333445556778888888 455588889999999999999999999999999554444333333333333355667777
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhcc
Q 018408 182 WGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPA 236 (356)
Q Consensus 182 ~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 236 (356)
+..++.|++.+...+....++.|.+|+++|++++|+.+....+|..++|.+++.+
T Consensus 343 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 343 LLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 7889999999999999999999999999999999999999999999999998865
No 134
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.42 E-value=1.1e-12 Score=122.53 Aligned_cols=156 Identities=18% Similarity=0.198 Sum_probs=116.6
Q ss_pred hHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhh----hchhH-HHHHhHHHHHHHHHHHHHhhh------H
Q 018408 109 PIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK----LGCRR-TFQIDTIPLILGAIISAQAHS------L 177 (356)
Q Consensus 109 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr~-~~~~~~~~~~i~~~~~~~~~~------~ 177 (356)
..+++.+++|+ +..+.|++.++..+..++..++.|+++|| +|||| .++++....+++.+++...++ .
T Consensus 22 l~~~~~~~~g~--s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~ 99 (437)
T TIGR00792 22 LLFFYTDVLGL--SAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKL 99 (437)
T ss_pred HHHHHHHccCC--CHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHH
Confidence 34566778898 67779999999999999999999999998 68855 566677888887777766543 3
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHhhc-CCCccchhHHHhHHHHHHHHHHHHHhhhccC-------CCCchhHHHHHH
Q 018408 178 DEMLWGRFLVGLGIGVNTVLVPIYISEVA-PTKYRGSLGTLCQVGTCLGIITSLFLGIPAE-------DDPHWWRTMLYI 249 (356)
Q Consensus 178 ~~~~~~~~l~G~~~g~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~-------~~~~~w~~~~~~ 249 (356)
..+++.+++.+++.+.......++..|+. ++++|++..++.+.+..+|..+++.+.+.+. +..+ |++.+++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g-~~~~~~i 178 (437)
T TIGR00792 100 VYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFG-WFMFALV 178 (437)
T ss_pred HHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc-HHHHHHH
Confidence 45566678888888877777788888887 4688999999988888887776655543332 2334 9999888
Q ss_pred hHHHHHHHHHH-hhcccCC
Q 018408 250 ASLPGFILALG-MQFTVES 267 (356)
Q Consensus 250 ~~~~~~~~~~~-~~~~~e~ 267 (356)
.+++.++..+. .++.+|+
T Consensus 179 ~~~l~~~~~~~~~~~~~e~ 197 (437)
T TIGR00792 179 LALIGVVSLIICFFGTKER 197 (437)
T ss_pred HHHHHHHHHHHHHcCCEec
Confidence 87776666544 4456664
No 135
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.42 E-value=2e-11 Score=112.28 Aligned_cols=177 Identities=16% Similarity=0.049 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHH
Q 018408 87 PHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLIL 166 (356)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i 166 (356)
.....+.+.......+......+...+.++.|+ +...+.+.+....+...+..+++.++.||+|||+.++++..++.+
T Consensus 270 ~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~--~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~ 347 (485)
T KOG0569|consen 270 PLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGF--TPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAV 347 (485)
T ss_pred HHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 334444444444545556666667788899998 555577888888999999999999999999999999999999988
Q ss_pred HHHHHHHhh---hHH------HHHHHHHHHHhhhh-hhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhcc
Q 018408 167 GAIISAQAH---SLD------EMLWGRFLVGLGIG-VNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPA 236 (356)
Q Consensus 167 ~~~~~~~~~---~~~------~~~~~~~l~G~~~g-~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 236 (356)
..+++.... +.. ..+++.++..++.+ +..|..+-+.+|++|.+.|..++++..+...+..++-......+
T Consensus 348 ~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l 427 (485)
T KOG0569|consen 348 ALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPL 427 (485)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887776431 111 12333444333333 23577888999999999999999999888888888877777777
Q ss_pred CCCCchhHHHHHHhHHHHHHHH-HHhhcccCC
Q 018408 237 EDDPHWWRTMLYIASLPGFILA-LGMQFTVES 267 (356)
Q Consensus 237 ~~~~~~w~~~~~~~~~~~~~~~-~~~~~~~e~ 267 (356)
.+..|. +.|++.++++++.. ..+..+|||
T Consensus 428 ~~~~g~--~~filF~i~~~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 428 QNVIGP--YVFILFVIPLAIFLIYLYRYLPET 457 (485)
T ss_pred HHHhcc--hhhHHHHHHHHHHHHHHHHhCccc
Confidence 776663 56666666666554 456779999
No 136
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.41 E-value=1.9e-11 Score=112.19 Aligned_cols=148 Identities=13% Similarity=0.029 Sum_probs=119.2
Q ss_pred hhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 018408 107 NGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFL 186 (356)
Q Consensus 107 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 186 (356)
....|.+.++.|. +....+.+.+...++..++.++.|++.||+|+|+.+..+.++.+++.+..+..++.+.+++..++
T Consensus 225 ~~~~~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 302 (382)
T PRK11128 225 YGFSAIYWQAAGY--SASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQIL 302 (382)
T ss_pred HHHHHHHHHHCCC--CHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 3344555567787 55558888888888888999999999999999999999999988888888888899988999999
Q ss_pred HHhhhhhhhhHHHHHHHhhcCCCccchhHHHhH-HHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHH
Q 018408 187 VGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQ-VGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILAL 259 (356)
Q Consensus 187 ~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~-~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~ 259 (356)
.|++.+...+....++.+. +++++++..++++ ....+|..++|.++|.+.+..+ + ..++..+++.+++++
T Consensus 303 ~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g-~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 303 HCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLG-A-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHHHHHHH
Confidence 9999998888888888886 5566788888875 6667888999999999999887 5 355555555554443
No 137
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.40 E-value=2.9e-14 Score=134.71 Aligned_cols=234 Identities=16% Similarity=0.171 Sum_probs=3.0
Q ss_pred HHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHH
Q 018408 92 ASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIIS 171 (356)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 171 (356)
+++..+.+....+.....+..+.+.|++ +.++.|++.+.+-++..+..++..++.+|..|-|.+-+|.++++++++++
T Consensus 8 ~~~~~~~q~~~~g~~~~~lttiErRF~l--~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~ 85 (539)
T PF03137_consen 8 LCLLGLFQMMVSGYVNSSLTTIERRFGL--SSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLF 85 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHH
Confidence 3444444466666777778899999999 56669999999999999999999999999999999999999999999888
Q ss_pred HHh-------------------------h-------------------------hHHHHHHHHHHHHhhhhhhhhHHHHH
Q 018408 172 AQA-------------------------H-------------------------SLDEMLWGRFLVGLGIGVNTVLVPIY 201 (356)
Q Consensus 172 ~~~-------------------------~-------------------------~~~~~~~~~~l~G~~~g~~~~~~~~~ 201 (356)
++- . -+..++++.++.|+|....+++..+|
T Consensus 86 ~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tY 165 (539)
T PF03137_consen 86 ALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITY 165 (539)
T ss_dssp ------------------------------------------------------------------SSS-----------
T ss_pred hccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeee
Confidence 640 0 02456778999999999999999999
Q ss_pred HHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCC---------------------chhHHHHHHhHHHHHHHHHH
Q 018408 202 ISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP---------------------HWWRTMLYIASLPGFILALG 260 (356)
Q Consensus 202 ~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~---------------------~~w~~~~~~~~~~~~~~~~~ 260 (356)
+-|..++++-+..+|+......+|.++|.++++.+.+.. |.|..-|++.+++.++..+.
T Consensus 166 iDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aip 245 (539)
T PF03137_consen 166 IDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIP 245 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999888665321 23555566666666666666
Q ss_pred hhcccCChHHHHhcCCHHHHHHHHHHHcCCcchHHHHHHHH--HHHHhcCCCCccchhhhcccCcchhhHHHH
Q 018408 261 MQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQ--LVIKKDGSDLDSQWSELLEEPHSRVAFIGD 331 (356)
Q Consensus 261 ~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 331 (356)
++++|+.-... ++..++.+.. +.+.++..+++.++.+ ....+.-++.....+.+++||.+....++.
T Consensus 246 l~~FPk~lp~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~ 314 (539)
T PF03137_consen 246 LFFFPKKLPGT--SERQEEKESS--ERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAG 314 (539)
T ss_dssp -------------------------------------------------------------------------
T ss_pred HHcCCccCCCc--ccccchhhhh--hcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHH
Confidence 67777652111 0000110100 0000000000000000 001122234456888999999988888877
No 138
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.39 E-value=2.1e-11 Score=113.79 Aligned_cols=170 Identities=21% Similarity=0.165 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHhhhhcchhhHHHHH-HHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhh--chhHHH-HHhHHHHH
Q 018408 90 LIASMSNFLFGYHIGVMNGPIVSIA-KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL--GCRRTF-QIDTIPLI 165 (356)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--Grr~~~-~~~~~~~~ 165 (356)
+.+.+..+...........++|.+. +++|+ +..+.+...+.+.++..++.++.|+++||+ ++|+.. ....+...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~--s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~ 323 (434)
T PRK11663 246 WLLSFSYVLVYVVRAAINDWGNLYMSETLGV--DLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGIL 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--CHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHH
Confidence 3333333333333334444555554 66788 555688889999999999999999999999 333322 22211111
Q ss_pred HHHHHHH--HhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchh
Q 018408 166 LGAIISA--QAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (356)
Q Consensus 166 i~~~~~~--~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w 243 (356)
+...+.. ...+...+++..+..|++..+.......++.|.+|+++||+++|+.++...+|..++|.+.+.+.++.+ |
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g-~ 402 (434)
T PRK11663 324 LSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWH-W 402 (434)
T ss_pred HHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcc-c
Confidence 1111111 122333333334445544333333445577899999999999999999999999999999999999888 9
Q ss_pred HHHHHHhHHHHHHHHHHhh
Q 018408 244 RTMLYIASLPGFILALGMQ 262 (356)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~ 262 (356)
+..|++.+++.++..+...
T Consensus 403 ~~~f~~~~~~~~~~~~~~~ 421 (434)
T PRK11663 403 TGFFVVISIAAGISALLLL 421 (434)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999988877776655443
No 139
>PRK15075 citrate-proton symporter; Provisional
Probab=99.39 E-value=3.7e-11 Score=112.14 Aligned_cols=137 Identities=18% Similarity=0.086 Sum_probs=97.5
Q ss_pred hhcchhhHHHHHH-HhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHH-HH---HhhhH
Q 018408 103 IGVMNGPIVSIAK-ELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAII-SA---QAHSL 177 (356)
Q Consensus 103 ~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~-~~---~~~~~ 177 (356)
........|.+.+ .+|+ +..+.++....+.++..++.+++|+++||+|||+.++.+.++..+..++ .. ..++.
T Consensus 254 ~~~~~~~~p~~l~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (434)
T PRK15075 254 FYLITVYTPTFGKTVLHL--SAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSF 331 (434)
T ss_pred HHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCch
Confidence 3344455665554 4788 4555778888888899999999999999999999888765544332221 11 12333
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHh-HHHHHHHHHHHHHhhhccCCCCc
Q 018408 178 DEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLC-QVGTCLGIITSLFLGIPAEDDPH 241 (356)
Q Consensus 178 ~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~-~~~~~~g~~~~~~i~~~l~~~~~ 241 (356)
..+.+..++.|++.+...+....++.|.+|++.|++++++. +++..+++.++|.+.+.+.++.+
T Consensus 332 ~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 332 ARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 34444456667777777777778899999999999999985 44555567889999998888766
No 140
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.39 E-value=3e-11 Score=112.41 Aligned_cols=137 Identities=19% Similarity=0.131 Sum_probs=100.6
Q ss_pred hhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 018408 107 NGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFL 186 (356)
Q Consensus 107 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 186 (356)
...+|.+.++.|. +....+.+.+...++..++.++.|++.||+|||+.+..+.++.++..+.....++.....+..++
T Consensus 251 ~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (426)
T PRK12307 251 FGLLPTYLAGEGF--DTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACL 328 (426)
T ss_pred HHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHH
Confidence 3455666667777 55567888888889999999999999999999999988887776665544433321112222233
Q ss_pred HHh--hhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHH
Q 018408 187 VGL--GIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTM 246 (356)
Q Consensus 187 ~G~--~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~ 246 (356)
.|+ +..+..+..+.++.|.+|++.||+++|+......+|+.++|.+.+.+.+..+ +...
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g-~~~~ 389 (426)
T PRK12307 329 FGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMG-LGAA 389 (426)
T ss_pred HHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHccc-HHHH
Confidence 333 2233345566788999999999999999999999999999999999988776 5443
No 141
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.39 E-value=6e-12 Score=114.26 Aligned_cols=131 Identities=18% Similarity=0.163 Sum_probs=113.8
Q ss_pred hhHHHHHHH-hCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhh-HHHHHHHHH
Q 018408 108 GPIVSIAKE-LGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHS-LDEMLWGRF 185 (356)
Q Consensus 108 ~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~ 185 (356)
...|.+.++ +|. +..+.+++.+...++..++.++.+++.||+|||+.+..+..+.+++..+..+.++ .+.+++..+
T Consensus 232 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (365)
T TIGR00900 232 ALFPYVQSKYLGR--GSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWF 309 (365)
T ss_pred HHhHHHHHHHhCC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHH
Confidence 445666654 777 5666889999999999999999999999999999999888888888777777764 778888899
Q ss_pred HHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCC
Q 018408 186 LVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP 240 (356)
Q Consensus 186 l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 240 (356)
+.|++.+...+....++.|.+|+++|++..++.+....+|..+++.+++.+.+..
T Consensus 310 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 310 AIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999999999999999887643
No 142
>TIGR00898 2A0119 cation transport protein.
Probab=99.38 E-value=8.5e-12 Score=118.77 Aligned_cols=135 Identities=19% Similarity=0.081 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhH--HHHHHHHHHHHhhhhhhhhHHHHHHHhhcC
Q 018408 130 VSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSL--DEMLWGRFLVGLGIGVNTVLVPIYISEVAP 207 (356)
Q Consensus 130 ~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p 207 (356)
..+..+..+++.++.+++.||+|||+.+.++.++.+++.++..+.++. ...++..++.+++.+..++..+.+.+|.+|
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 440 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYP 440 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 344556677889999999999999999999999988888877776543 444555666777777788888999999999
Q ss_pred CCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHhhcccCC
Q 018408 208 TKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVES 267 (356)
Q Consensus 208 ~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~ 267 (356)
++.|++++|+.+....+|.+++|.+.+ +. ..+ +...+++.++..++..+..+++||+
T Consensus 441 ~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~-~~~~~~~~~~~~~~~~~~~~~lpet 497 (505)
T TIGR00898 441 TVVRNLGVGVCSTMARVGSIISPFLVY-LG-EKW-LFLPLVLFGGLALLAGILTLFLPET 497 (505)
T ss_pred HHHHhhhHhHHHHHHHHHHHHHhHHHH-HH-HHH-HhhHHHHHHHHHHHHHHHHHcCcCC
Confidence 999999999999999999999999988 33 333 5667777777777777777788987
No 143
>PRK10504 putative transporter; Provisional
Probab=99.37 E-value=2.8e-11 Score=114.21 Aligned_cols=137 Identities=15% Similarity=0.117 Sum_probs=107.8
Q ss_pred hhhcchhhHHHHHH-HhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHh---hhH
Q 018408 102 HIGVMNGPIVSIAK-ELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA---HSL 177 (356)
Q Consensus 102 ~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~---~~~ 177 (356)
.........|++.+ .+|. +....+++.....++..++.++.|++.||+|||+++.++.++.++..++..+. .+.
T Consensus 276 ~~~~~~~~~~~~~~~~~g~--~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (471)
T PRK10504 276 GSGMLPFMTPVFLQIGLGF--SPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWY 353 (471)
T ss_pred HHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccH
Confidence 33444455666655 4676 66678888888888888888999999999999999998888888777666553 233
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCC
Q 018408 178 DEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP 240 (356)
Q Consensus 178 ~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 240 (356)
..+.+..++.|++.+...+....++.+..|++.|+.+.++.++...+|..+++.+++.+.+..
T Consensus 354 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~ 416 (471)
T PRK10504 354 YLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLF 416 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344455677888888888888899999999999999999999999999999998888765543
No 144
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.37 E-value=1.6e-11 Score=113.65 Aligned_cols=165 Identities=14% Similarity=0.097 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHH-HHHhHHHHHHHH
Q 018408 90 LIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRT-FQIDTIPLILGA 168 (356)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~-~~~~~~~~~i~~ 168 (356)
+...+.++............+|.+.++++.+.+..+.+.+.+...++..++.+++|+++||++||+. +....++.+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~ 324 (412)
T TIGR02332 245 MLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGW 324 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHH
Confidence 3334444444444445566777777775433355667888899999999999999999999997774 333444444433
Q ss_pred HHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHH
Q 018408 169 IISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLY 248 (356)
Q Consensus 169 ~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~ 248 (356)
++.....+....+++-++.+++.....+.......|.+|+++|++++|+.+....+|.+++|.+.+.+.+..++|++.++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~ 404 (412)
T TIGR02332 325 LLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLW 404 (412)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHH
Confidence 22222222222222222333333333344445557889999999999999999999999999999999998766998888
Q ss_pred HhHHHH
Q 018408 249 IASLPG 254 (356)
Q Consensus 249 ~~~~~~ 254 (356)
+.++..
T Consensus 405 ~~~~~~ 410 (412)
T TIGR02332 405 FVAALL 410 (412)
T ss_pred HHHHHH
Confidence 766543
No 145
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.37 E-value=7.3e-11 Score=110.08 Aligned_cols=157 Identities=12% Similarity=0.009 Sum_probs=99.2
Q ss_pred chhhHHHH-HHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHH--H--hhhHHHH
Q 018408 106 MNGPIVSI-AKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISA--Q--AHSLDEM 180 (356)
Q Consensus 106 ~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~--~--~~~~~~~ 180 (356)
...++|.+ .+.+|. +..+.+...++..++..++.++.|+++||+|||+.+.++.++.++..+... . ..+....
T Consensus 262 ~~~~lp~~l~~~~g~--s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (432)
T PRK10406 262 FTTYMQKYLVNTAGM--HANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAA 339 (432)
T ss_pred HHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH
Confidence 34445544 456787 455577777777777888899999999999999988776655444333221 1 1222222
Q ss_pred HHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHH-HHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHH
Q 018408 181 LWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVG-TCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILAL 259 (356)
Q Consensus 181 ~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~-~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~ 259 (356)
+..-++.+++.+...+....+++|++|++.|++++|+.+.. ..+++...|.+.+.+ +..+.|...+++.++..++..+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~ 418 (432)
T PRK10406 340 FGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFL 418 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHH
Confidence 22222233334444455677889999999999999997654 434444577777755 4444366666666666666665
Q ss_pred Hhhccc
Q 018408 260 GMQFTV 265 (356)
Q Consensus 260 ~~~~~~ 265 (356)
..++++
T Consensus 419 ~~~~l~ 424 (432)
T PRK10406 419 VSLMLH 424 (432)
T ss_pred HHHHhh
Confidence 555543
No 146
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.37 E-value=1.9e-11 Score=115.36 Aligned_cols=153 Identities=22% Similarity=0.182 Sum_probs=132.6
Q ss_pred cchhhHHHHH-HHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHH
Q 018408 105 VMNGPIVSIA-KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWG 183 (356)
Q Consensus 105 ~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 183 (356)
.+...+|.+. +.+|. +....|++.+++.+|.++|.++.+++.+|+++++.+..+.++.+++.+..+++++.+..+++
T Consensus 236 a~~aLlPl~a~~~l~~--~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~ 313 (524)
T PF05977_consen 236 AVWALLPLFARDVLGG--GASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIA 313 (524)
T ss_pred HHHHhhhHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 3344567665 45676 56679999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHH
Q 018408 184 RFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALG 260 (356)
Q Consensus 184 ~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~ 260 (356)
.++.|++.........+.+.+..|++.||+.++++++....+..+|..+.|.+.+..| .+..+.++++..++..++
T Consensus 314 l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g-~~~al~~a~~~lll~~~~ 389 (524)
T PF05977_consen 314 LFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFG-VRTALLIAGAALLLSALI 389 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHH
Confidence 9999999999989999999999999999999999999999999999999999998888 777777776655554443
No 147
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.36 E-value=1.8e-11 Score=114.37 Aligned_cols=119 Identities=23% Similarity=0.181 Sum_probs=98.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHh-hhHHHHHHHHHHHHhhhhhhhhHHHHH
Q 018408 123 PILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA-HSLDEMLWGRFLVGLGIGVNTVLVPIY 201 (356)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~l~G~~~g~~~~~~~~~ 201 (356)
....+++.+...++.+++.+++++++||+|+|+++.++.++.+++.++..+. ++.+.+++..++.|++.+...+...++
T Consensus 256 ~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 335 (437)
T TIGR00792 256 PELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWAL 335 (437)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3446677778889999999999999999999999999988888887776655 356666777888999999988999999
Q ss_pred HHhhcC-------CCccchhHHHhHHHHHHHHHHHHHhhhccCCCCc
Q 018408 202 ISEVAP-------TKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH 241 (356)
Q Consensus 202 ~~e~~p-------~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~ 241 (356)
++|..+ ++.+|...|+++....+|..+++.+.+.+.+..|
T Consensus 336 ~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 336 VADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIG 382 (437)
T ss_pred HhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 988865 4567999999999999999999998887765433
No 148
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.35 E-value=6.7e-12 Score=119.31 Aligned_cols=233 Identities=18% Similarity=0.170 Sum_probs=169.3
Q ss_pred HHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHH
Q 018408 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (356)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 168 (356)
+.++++..+..++....+...+..+.+.|+++ ..+.|++.+.+-++..+...+..++.-|..|-+.+-+|.++++++.
T Consensus 99 l~~l~~~~~~q~l~~~y~~s~IttiErRF~i~--Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 99 LVLLSLAAFAQGLYVGYFNSVITTIERRFKIS--SSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGS 176 (735)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCC--CCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHH
Confidence 45566677777777788888889999999995 4449999999999999999999999999999999999999999999
Q ss_pred HHHHHh--------------------h--------------------------------hHHHHHHHHHHHHhhhhhhhh
Q 018408 169 IISAQA--------------------H--------------------------------SLDEMLWGRFLVGLGIGVNTV 196 (356)
Q Consensus 169 ~~~~~~--------------------~--------------------------------~~~~~~~~~~l~G~~~g~~~~ 196 (356)
+++++- + -+..++++.++.|+|....++
T Consensus 177 ll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t 256 (735)
T KOG3626|consen 177 LLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT 256 (735)
T ss_pred HHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc
Confidence 988751 0 012456679999999999999
Q ss_pred HHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCC------------------CchhHHHHHHhHHHHHHHH
Q 018408 197 LVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD------------------PHWWRTMLYIASLPGFILA 258 (356)
Q Consensus 197 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~------------------~~~w~~~~~~~~~~~~~~~ 258 (356)
...+|+-|...+++-...+|+......+|.++|.++++++... .|.|..-|++++.+.++..
T Consensus 257 lGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a 336 (735)
T KOG3626|consen 257 LGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSA 336 (735)
T ss_pred CCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988865531 1237777778888888888
Q ss_pred HHhhcccCChHHHHhcCCHHHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCccchhhhcccCcchhhHHHH
Q 018408 259 LGMQFTVESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQWSELLEEPHSRVAFIGD 331 (356)
Q Consensus 259 ~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 331 (356)
+.++++|....- .++. ...+..+..+.+++..++ +....++-++...+.+.+++||.+...+++.
T Consensus 337 ~p~f~fPk~lp~---~~~~-~~~~~~~~~k~~~~~~~~----~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~ 401 (735)
T KOG3626|consen 337 VPLFFFPKELPK---SQKR-KRARDLHVLKTESGGAKS----DKTFGKKIKDFPKSIKRLLSNPIFMLVVLAS 401 (735)
T ss_pred HHHHhCcccCcc---cccc-chhhhhcccccccccccC----CcchhhhHHHHHHHHHHHhcCchHHHHHHHH
Confidence 888888866321 1110 000001111111100000 0000011122245788899999988888877
No 149
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.34 E-value=2.6e-11 Score=114.38 Aligned_cols=150 Identities=15% Similarity=0.067 Sum_probs=105.9
Q ss_pred HHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchh-------HHHHHhHHHHHHHHHHHHHhhhHHHHHHH
Q 018408 111 VSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCR-------RTFQIDTIPLILGAIISAQAHSLDEMLWG 183 (356)
Q Consensus 111 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr-------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 183 (356)
+++.+++|+ +....+.+.+++.++..++.+++|+++||+||| ..+.+..++.+++.++....++....++.
T Consensus 277 ~~l~~~~g~--s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~ 354 (476)
T PLN00028 277 EYFYDRFGL--SLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVV 354 (476)
T ss_pred HHHHHhcCC--CHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 344566788 566688899999999999999999999999876 22333333333444444455565555556
Q ss_pred HHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHhhc
Q 018408 184 RFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQF 263 (356)
Q Consensus 184 ~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~ 263 (356)
.++.+++.+...+....++.+..| ++||...|+.+.+..+|+.+++.+.+ . +..++|+..|++.+++.+++.++.++
T Consensus 355 ~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~-~~~~~y~~~f~~~~~~~~i~~~~~~~ 431 (476)
T PLN00028 355 MILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-T-GSSYSTETGISLMGVMIIACTLPVAF 431 (476)
T ss_pred HHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-h-cCCccHhhHHHHHHHHHHHHHHHHHh
Confidence 666677666666666666677654 68999999998888888888887754 2 22233999999988887777776666
Q ss_pred cc
Q 018408 264 TV 265 (356)
Q Consensus 264 ~~ 265 (356)
++
T Consensus 432 ~~ 433 (476)
T PLN00028 432 IH 433 (476)
T ss_pred ee
Confidence 54
No 150
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.34 E-value=6.5e-11 Score=109.15 Aligned_cols=138 Identities=13% Similarity=0.064 Sum_probs=117.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHH
Q 018408 122 NPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIY 201 (356)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~ 201 (356)
+....+.+.++..+...++.+..|++.||+|||+.+.++.++.++...+....++.+.+++..++.|++..........+
T Consensus 252 ~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 331 (396)
T TIGR00882 252 GTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKY 331 (396)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33456788888888888899999999999999999999998888888877778888888888999999887777777778
Q ss_pred HHhhcCCCccchhHHH-hHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHH
Q 018408 202 ISEVAPTKYRGSLGTL-CQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALG 260 (356)
Q Consensus 202 ~~e~~p~~~r~~~~~~-~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~ 260 (356)
..+..+++.+++..+. ++....+|..+++.+++.+.+..| |+..|.+.++..++..+.
T Consensus 332 ~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G-~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 332 ITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIG-FQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcc-cHHHHHHHHHHHHHHHHH
Confidence 8888898888887776 678999999999999999999887 999999987776666544
No 151
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.34 E-value=5.1e-12 Score=109.50 Aligned_cols=129 Identities=17% Similarity=0.181 Sum_probs=98.2
Q ss_pred HHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccch
Q 018408 134 IAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGS 213 (356)
Q Consensus 134 ~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~ 213 (356)
.+.-..|.++.+++.||+|||+++..++++++++.++...+.+...+.+..+..-++..+.+.+.+.|..|.+|+..|++
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRat 470 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRAT 470 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhc
Confidence 44567899999999999999999999999999999988777655544444455555566666777789999999999999
Q ss_pred hHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHhhccc
Q 018408 214 LGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTV 265 (356)
Q Consensus 214 ~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 265 (356)
+.|.......+|+++.|+++-..-.+ -.....+.....+++.++..++|
T Consensus 471 gvGtcSsmaRIggI~~p~iA~~~e~s---~sl~i~vy~~~~ilagIavcffP 519 (528)
T KOG0253|consen 471 GVGTCSSMARIGGIFSPVIAMRAELS---TSLPIFVYGALFILAGIAVCFFP 519 (528)
T ss_pred chhhhhhHHhhhhhhhhHHHHHhccc---eeehHHHHHHHHHHHHHHheeee
Confidence 99999999999999999998322222 22333444555556666666777
No 152
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.33 E-value=1.1e-10 Score=110.46 Aligned_cols=155 Identities=15% Similarity=0.117 Sum_probs=118.1
Q ss_pred HHHHHHHhCCCCChhHHHHHHH-HHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHH---HHh-hhHHHHHHHH
Q 018408 110 IVSIAKELGFEGNPILEGLVVS-IFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIIS---AQA-HSLDEMLWGR 184 (356)
Q Consensus 110 ~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~---~~~-~~~~~~~~~~ 184 (356)
.|++.+++|+ +..+.+++.. ...++.+++.+++|+++||+|+|+.+.++.++.+++.++. +.. ++...+.+..
T Consensus 246 ~~~l~~~~G~--s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~ 323 (491)
T PRK11010 246 TTFLIRGVGF--DAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAV 323 (491)
T ss_pred HHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Confidence 4555667888 5666888764 5567899999999999999999998877666555544332 232 3444455556
Q ss_pred HHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHhhcc
Q 018408 185 FLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFT 264 (356)
Q Consensus 185 ~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 264 (356)
++..++.|...+...++..+..+++.+++..++.+....+|..+++.++|.+.+..| |+..|.+.++..+++.+...++
T Consensus 324 ~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G-~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 324 FFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHG-WPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHH
Confidence 666666666667778888999999999999999999999999999999999998887 9999998888888877666555
Q ss_pred cCC
Q 018408 265 VES 267 (356)
Q Consensus 265 ~e~ 267 (356)
+++
T Consensus 403 ~~~ 405 (491)
T PRK11010 403 RQT 405 (491)
T ss_pred Hhc
Confidence 543
No 153
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.33 E-value=3.8e-11 Score=106.53 Aligned_cols=175 Identities=15% Similarity=0.105 Sum_probs=144.4
Q ss_pred HHHHHHHHHHHHhhhhcchhhHHHH-HHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHH
Q 018408 89 VLIASMSNFLFGYHIGVMNGPIVSI-AKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (356)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~ 167 (356)
.++++-..+.++.+. .......+ ..++|+ ++.+...+.....+..++|++++|++.||+|.|+++.++.++..+.
T Consensus 256 ~FLiA~~~~~DGv~t--il~~~~~fg~~~~gl--s~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~ 331 (438)
T COG2270 256 LFLIARFFYIDGVNT--ILAMGGVFGAADLGL--SSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIA 331 (438)
T ss_pred HHHHHHHHHHhhHHH--HHHHHHHHHHHHcCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHH
Confidence 344444444454432 22222233 458899 6777888899999999999999999999999999999999999998
Q ss_pred HHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHH
Q 018408 168 AIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTML 247 (356)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~ 247 (356)
++...+...-..+.++-++.|.+.|+.++..-+|..++.|+++-+..+|++++....+..++|.+.+.+.+..++-|..+
T Consensus 332 ~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~ 411 (438)
T COG2270 332 ALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGV 411 (438)
T ss_pred HHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHH
Confidence 88888888878888889999999999999999999999999999999999999999999999999999988887778777
Q ss_pred HHhHHHHHHHHHHhhcccCC
Q 018408 248 YIASLPGFILALGMQFTVES 267 (356)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~e~ 267 (356)
...+++.++.++....+|+.
T Consensus 412 ~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 412 LSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHHhhHhhEEeecCC
Confidence 77777777777777777654
No 154
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.33 E-value=2.4e-11 Score=110.12 Aligned_cols=174 Identities=18% Similarity=0.224 Sum_probs=136.2
Q ss_pred HHHHHHHHHHHHhhhhcchhhH-HHHHHHhC----CCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhh-chhHHHHHhHH
Q 018408 89 VLIASMSNFLFGYHIGVMNGPI-VSIAKELG----FEGNPILEGLVVSIFIAGAFVGSISSGSLADKL-GCRRTFQIDTI 162 (356)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~ 162 (356)
++.+...-+..-+.++.+...+ -++..+++ + +++++.-+.+.|..---+..+++||++||+ |+|++++.|.+
T Consensus 23 l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~--~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGai 100 (498)
T COG3104 23 LYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGF--DETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAI 100 (498)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCc--ChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Confidence 3444444455555554444433 35555555 7 444455556666555556788999999996 99999999999
Q ss_pred HHHHHHHHHHHhh--hHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCC--ccchhHHHhHHHHHHHHHHHHHhhhccCC
Q 018408 163 PLILGAIISAQAH--SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTK--YRGSLGTLCQVGTCLGIITSLFLGIPAED 238 (356)
Q Consensus 163 ~~~i~~~~~~~~~--~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~--~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 238 (356)
+.+++.++.+... +...++++..++++|.|..=+....++.|.+|++ +|-.+++++.++.++|++++|++.+++.+
T Consensus 101 l~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~ 180 (498)
T COG3104 101 LMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAI 180 (498)
T ss_pred HHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHH
Confidence 9999999999884 7888999999999999999999999999999863 36678888999999999999999999999
Q ss_pred CCchhHHHHHHhHHHHHHHHHHhhccc
Q 018408 239 DPHWWRTMLYIASLPGFILALGMQFTV 265 (356)
Q Consensus 239 ~~~~w~~~~~~~~~~~~~~~~~~~~~~ 265 (356)
..+ |...|..+++-..++++...+.+
T Consensus 181 ~~g-~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 181 NYG-WHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred hhC-HHHHHHHHHHHHHHHHHHHHHcc
Confidence 988 99999998888777776655543
No 155
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.32 E-value=5e-11 Score=109.04 Aligned_cols=183 Identities=19% Similarity=0.254 Sum_probs=137.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhch-hHHHHHhHHH
Q 018408 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGC-RRTFQIDTIP 163 (356)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~~~~~ 163 (356)
+|+.++++.+..++.+...+++.+..-.+.++++.+.+....|++.++..+|.+++++++|+...|.|. |+.++.|.++
T Consensus 32 ~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii 111 (488)
T KOG2325|consen 32 NWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLI 111 (488)
T ss_pred chHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHH
Confidence 466677777778888887777766654455565555567779999999999999999999999999987 8888999999
Q ss_pred HHHHHHHH-HHh---h-hHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCC
Q 018408 164 LILGAIIS-AQA---H-SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED 238 (356)
Q Consensus 164 ~~i~~~~~-~~~---~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 238 (356)
.++++++. ++. + ..+.++++|++.|+|.|.. +..-.|+++....+.|.++++....+..+|..+||.+...+..
T Consensus 112 ~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~ 190 (488)
T KOG2325|consen 112 AIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTP 190 (488)
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhh
Confidence 99999887 332 2 5678889999999998765 7788899998888899999998888777777777776554432
Q ss_pred CC--c----------hhHHHHHHhHHHHHHHHHH-hhcccCCh
Q 018408 239 DP--H----------WWRTMLYIASLPGFILALG-MQFTVESP 268 (356)
Q Consensus 239 ~~--~----------~w~~~~~~~~~~~~~~~~~-~~~~~e~p 268 (356)
-. | -+...-|+.+++.++.++. .+++.|.+
T Consensus 191 Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~ 233 (488)
T KOG2325|consen 191 LGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVY 233 (488)
T ss_pred hcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecc
Confidence 11 1 1445566666666666544 45566664
No 156
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.32 E-value=9.3e-11 Score=104.87 Aligned_cols=156 Identities=19% Similarity=0.165 Sum_probs=127.5
Q ss_pred hhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhh-hHHHHH
Q 018408 103 IGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH-SLDEML 181 (356)
Q Consensus 103 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~-~~~~~~ 181 (356)
+..+.+.-|.+.+..|+ +....+++...+.++..+|.+++|+++|| +.|+.+.....+.++..+...+.. +.+..+
T Consensus 228 F~~ftYi~P~L~~v~g~--s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~ 304 (394)
T COG2814 228 FALYTYIRPFLESVAGF--SVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALAL 304 (394)
T ss_pred hhhHHhHHHHHHHccCC--CHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHH
Confidence 34555666888888899 55569999999999999999999999999 999999888888888877766654 455556
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHh
Q 018408 182 WGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGM 261 (356)
Q Consensus 182 ~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~ 261 (356)
+.-++.|+..+........-+++ .-++.+..+.+++...+++|..+|..+++.+.++.| +....+++++..+++.++.
T Consensus 305 ~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g-~~~~~~~~a~l~~~a~~~~ 382 (394)
T COG2814 305 ALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALG-YAATGWVGAALLLLALLLA 382 (394)
T ss_pred HHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHHHHHHHH
Confidence 66677788777666666666666 335779999999999999999999999999999977 9999999999888887665
Q ss_pred hc
Q 018408 262 QF 263 (356)
Q Consensus 262 ~~ 263 (356)
++
T Consensus 383 ~~ 384 (394)
T COG2814 383 LL 384 (394)
T ss_pred HH
Confidence 54
No 157
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.31 E-value=1.9e-10 Score=97.32 Aligned_cols=160 Identities=17% Similarity=0.096 Sum_probs=120.8
Q ss_pred hhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHh-------h
Q 018408 103 IGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA-------H 175 (356)
Q Consensus 103 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~-------~ 175 (356)
.+.++.+.|.+++.+|+ ++.+...+.+.-.+|..+| ++.|.+.|++|.+.++.+|.++..++..+...+ .
T Consensus 18 ~Y~Fs~yS~~Lk~~l~~--sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~ 94 (250)
T PF06813_consen 18 TYTFSAYSPQLKSRLGY--SQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSL 94 (250)
T ss_pred ccchhhhhHHHHHHhCC--CHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCcc
Confidence 34556667899999999 7777889999999998875 888999999999999999999999999877653 3
Q ss_pred hHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHH
Q 018408 176 SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGF 255 (356)
Q Consensus 176 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~ 255 (356)
+++.+.+..++.|.+.+...+.......+.|| ++||++.|+.-....+++.+-..+...+..... -...+..+..+.+
T Consensus 95 ~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~-~~fll~la~~~~~ 172 (250)
T PF06813_consen 95 PVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDP-SSFLLFLAVLPAV 172 (250)
T ss_pred chHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCCh-HHHHHHHHHHHHH
Confidence 56677777777777777776777777778898 579999999988888877776666555554433 3444445555555
Q ss_pred HHHHHhhcccCC
Q 018408 256 ILALGMQFTVES 267 (356)
Q Consensus 256 ~~~~~~~~~~e~ 267 (356)
+.++..++++..
T Consensus 173 v~l~~~~~vr~~ 184 (250)
T PF06813_consen 173 VCLVAMFFVRPV 184 (250)
T ss_pred HHHHHhhheecc
Confidence 555555555443
No 158
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.30 E-value=4.9e-11 Score=112.03 Aligned_cols=176 Identities=19% Similarity=0.171 Sum_probs=152.3
Q ss_pred HHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhc--hhHHHHHhHHHHH
Q 018408 88 HVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLG--CRRTFQIDTIPLI 165 (356)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G--rr~~~~~~~~~~~ 165 (356)
.++...+..........+....+|.+.++.|+ ++.+.+.+.++..+...++.++.|+++|+.. ++.+..++.+..+
T Consensus 299 ~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~--~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~g 376 (509)
T KOG2504|consen 299 KFLLLALSNLFAYLGFNVPFVYLPSYAKSLGL--SSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAG 376 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--ChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHH
Confidence 34555555555555666667778888889898 5566899999999999999999999999987 5566677888888
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHH
Q 018408 166 LGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRT 245 (356)
Q Consensus 166 i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~ 245 (356)
++.+.++++++++.++..-.+.|+..|...+.....+.|+.+.++-..+.|+..++..++..++|++++.+.+..++|..
T Consensus 377 l~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~ 456 (509)
T KOG2504|consen 377 LARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDH 456 (509)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeee
Confidence 88888999999999999999999999999998888999999999999999999999999999999999999998888999
Q ss_pred HHHHhHHHHHHHHHHhhccc
Q 018408 246 MLYIASLPGFILALGMQFTV 265 (356)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~ 265 (356)
.|+.+++..++..+.+++.+
T Consensus 457 ~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 457 AFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred ehhhcChHHHHHHHHHHHhH
Confidence 99999988888887777665
No 159
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.29 E-value=1e-10 Score=109.96 Aligned_cols=174 Identities=17% Similarity=0.082 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhc-----hhHHHHHhHHH
Q 018408 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLG-----CRRTFQIDTIP 163 (356)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-----rr~~~~~~~~~ 163 (356)
..++...++..|..........+.+.+++|+ +..+.+.+.+...+.+.+-.+ +|+++||++ ||+.++++.++
T Consensus 28 ~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~--s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 28 LAIGLQVLFVKGIAGLMRLPLSPMLTDDLGL--DGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLL 104 (468)
T ss_pred HHHHHHHHHHhhHHHHhhhhhhHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHH
Confidence 3445555677777733344455677778999 666788888888888888555 999999997 77777777766
Q ss_pred HH-HHHHHHHHhhhHHHHH-HHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHh---HHHHHHHHHHHHHhhhccCC
Q 018408 164 LI-LGAIISAQAHSLDEML-WGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLC---QVGTCLGIITSLFLGIPAED 238 (356)
Q Consensus 164 ~~-i~~~~~~~~~~~~~~~-~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~---~~~~~~g~~~~~~i~~~l~~ 238 (356)
.. ++....+..++..... +..++.+++.+......-.+..|..+ +++....+.. .....+|..+++.+++.+.+
T Consensus 105 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~ 183 (468)
T TIGR00788 105 GSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLD 183 (468)
T ss_pred HHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 53 4333333334544444 47889999999999999999999998 5555444333 33345899999999999888
Q ss_pred CCchhHHHHHHhHHHHHHHHHHhhcccCC
Q 018408 239 DPHWWRTMLYIASLPGFILALGMQFTVES 267 (356)
Q Consensus 239 ~~~~w~~~~~~~~~~~~~~~~~~~~~~e~ 267 (356)
..+ |+..|++.+++.++..+..++++|+
T Consensus 184 ~~~-~~~~f~~~a~l~ll~~~~~~~~~E~ 211 (468)
T TIGR00788 184 KTL-TRILFLITAALLLLQLFVSNLSKER 211 (468)
T ss_pred hcC-cchHHHHHHHHHHHHHHHHHhcccc
Confidence 877 9999999887777776666778886
No 160
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.29 E-value=3.2e-10 Score=100.74 Aligned_cols=160 Identities=13% Similarity=0.098 Sum_probs=116.5
Q ss_pred HHHHHHHHHHHHHHhhhhcchhhHHHHHHH---hCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHH
Q 018408 87 PHVLIASMSNFLFGYHIGVMNGPIVSIAKE---LGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (356)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 163 (356)
+.++...++.+.+.......+.+.+.+.++ +|+ +..+.+...+.+..++.+|.++.+++.||+|+|+.+.++.++
T Consensus 140 ~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~--s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l 217 (310)
T TIGR01272 140 THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGL--PEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFL 217 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 334444444444443344445555555543 466 566789999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchh
Q 018408 164 LILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (356)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w 243 (356)
.+++.++....++... ..+-++.|++.+..+|...+...+.+|++ .+++.++. ....+|+++.|.+.|.+.|..+ .
T Consensus 218 ~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g-~ 293 (310)
T TIGR01272 218 AVLLSIGAALTHGYVA-MWFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLG-I 293 (310)
T ss_pred HHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhcc-c
Confidence 8777766655554333 34566889999999999998888888754 45666665 4566899999999999988777 7
Q ss_pred HHHHHHhHH
Q 018408 244 RTMLYIASL 252 (356)
Q Consensus 244 ~~~~~~~~~ 252 (356)
+..+++..+
T Consensus 294 ~~a~~v~~~ 302 (310)
T TIGR01272 294 QLAFALPVP 302 (310)
T ss_pred hHHHHHHHH
Confidence 777764433
No 161
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.29 E-value=8.1e-10 Score=98.76 Aligned_cols=159 Identities=15% Similarity=0.077 Sum_probs=130.2
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHH
Q 018408 79 DLGWLPAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQ 158 (356)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~ 158 (356)
.+-+.+||..++..++..+..++....+.+...+....|| +.....|...+|.+.++...+++.|+.|++|-|....
T Consensus 37 ~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg---s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~l 113 (480)
T KOG2563|consen 37 HRVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG---SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALL 113 (480)
T ss_pred cccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc---chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHH
Confidence 3456678888888888888888877777777788888888 3334779999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHhh------hHH--HHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHH
Q 018408 159 IDTIPLILGAIISAQAH------SLD--EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSL 230 (356)
Q Consensus 159 ~~~~~~~i~~~~~~~~~------~~~--~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~ 230 (356)
++..+.+++..+-..+. .++ ....+..+.+.++-.....-.-...-|||+++|+.+..+-.++..+|.+++.
T Consensus 114 lgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~ 193 (480)
T KOG2563|consen 114 LGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGF 193 (480)
T ss_pred HHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHh
Confidence 99999999999876652 233 5566777777777666666567778899999999999999889899999998
Q ss_pred HhhhccCCCC
Q 018408 231 FLGIPAEDDP 240 (356)
Q Consensus 231 ~i~~~l~~~~ 240 (356)
++...+..+.
T Consensus 194 llppilV~~~ 203 (480)
T KOG2563|consen 194 LLPPILVPSS 203 (480)
T ss_pred hccceecCCC
Confidence 8888877654
No 162
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.28 E-value=8.5e-11 Score=109.84 Aligned_cols=158 Identities=11% Similarity=0.034 Sum_probs=102.2
Q ss_pred hhhHHHHH-HHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHH---HHHHHHHHh--hhHHHH
Q 018408 107 NGPIVSIA-KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLI---LGAIISAQA--HSLDEM 180 (356)
Q Consensus 107 ~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~---i~~~~~~~~--~~~~~~ 180 (356)
....|.+. +..|+ +..+.++....+.++..++.+++|+++||+|+++....+..+.. ++.+..... .+....
T Consensus 271 ~~~~p~~l~~~~g~--s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (438)
T TIGR00712 271 LDWSPTYLKEVKHF--ALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVD 348 (438)
T ss_pred HHhHHHHHHHccCC--ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHH
Confidence 34455554 44677 55568888888999999999999999999965432222322221 111221121 233333
Q ss_pred HHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHH-HHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHH
Q 018408 181 LWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLG-IITSLFLGIPAEDDPHWWRTMLYIASLPGFILAL 259 (356)
Q Consensus 181 ~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g-~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~ 259 (356)
.+..++.|++..+..........|.+|++.||+++|+.+....+| .+++|.+.+.+.++.| |...+++.++..+++.+
T Consensus 349 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g-~~~~~~~~~~~~~~~~~ 427 (438)
T TIGR00712 349 MICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAVI 427 (438)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhcc-chHHHHHHHHHHHHHHH
Confidence 334455555433332333346789999999999999998877776 4689999999999887 99998887666555544
Q ss_pred -HhhcccCC
Q 018408 260 -GMQFTVES 267 (356)
Q Consensus 260 -~~~~~~e~ 267 (356)
.++++||.
T Consensus 428 ~~~~~~~~~ 436 (438)
T TIGR00712 428 LLIVVMIGE 436 (438)
T ss_pred HHHHHHhhc
Confidence 44456665
No 163
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.27 E-value=1e-10 Score=110.16 Aligned_cols=174 Identities=16% Similarity=0.052 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHhhhhcchhhHHHH-HHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHH--------HH
Q 018408 89 VLIASMSNFLFGYHIGVMNGPIVSI-AKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTF--------QI 159 (356)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~--------~~ 159 (356)
++...+..+...+....+..++|.+ .+.+|. +..+.+++.++..++..++.++.|+++||+++|+.. ..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~--s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 340 (465)
T TIGR00894 263 VWAIWFAIFGHFWLYTILPTYLPTFISWVLRV--SGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFN 340 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc--ChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence 4445555555555555555566655 556788 556688999999999999999999999998755321 11
Q ss_pred hHHHH--HHHHHHHHH-hhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhcc
Q 018408 160 DTIPL--ILGAIISAQ-AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPA 236 (356)
Q Consensus 160 ~~~~~--~i~~~~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 236 (356)
+..+. ++..++... ..+....+++.++.+.+.+...+.......|..|. .+|..+++.++...+|+.++|.+.+.+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~ 419 (465)
T TIGR00894 341 GIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNI 419 (465)
T ss_pred HHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhhee
Confidence 11111 111111222 22333344444555555555555555555677765 799999999999999999999999988
Q ss_pred CCCC--chhHHHHHHhHHHHHHHHHHhhccc
Q 018408 237 EDDP--HWWRTMLYIASLPGFILALGMQFTV 265 (356)
Q Consensus 237 ~~~~--~~w~~~~~~~~~~~~~~~~~~~~~~ 265 (356)
.+.. +.|...|++.++..++..+...+++
T Consensus 420 ~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 420 LSQDSKNVWLIVFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred eCCCCchHHHHHHHHHHHHHHHHHHHeeeee
Confidence 7654 4488899888877777766555543
No 164
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.27 E-value=4.2e-11 Score=109.22 Aligned_cols=152 Identities=20% Similarity=0.152 Sum_probs=103.8
Q ss_pred HHHHHHHHHhhhhcchhhHHH-HHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhch-hHHHH-HhH-HHHHHH
Q 018408 92 ASMSNFLFGYHIGVMNGPIVS-IAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGC-RRTFQ-IDT-IPLILG 167 (356)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-r~~~~-~~~-~~~~i~ 167 (356)
+.+..+.............|. +.+.+|. +..+.+++.+.+.++..++.++.|+++||.++ |+... ... .+..++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~ 298 (379)
T TIGR00881 221 ISLGYVFVYVVRTGILDWSPLYLTQEKGF--SKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVS 298 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHH
Confidence 333333333333333444444 4566787 55668889999999999999999999998643 33222 221 112222
Q ss_pred HHHHHH--hhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHH
Q 018408 168 AIISAQ--AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRT 245 (356)
Q Consensus 168 ~~~~~~--~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~ 245 (356)
...... ..+...+++..++.|+...+..+....+..|.+|+++|+++.++.+....+|..++|.+.+.+.++.| |++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~ 377 (379)
T TIGR00881 299 LLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFG-WAG 377 (379)
T ss_pred HHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhc-ccc
Confidence 222222 23445555666777776666666677789999999999999999999999999999999999999877 876
Q ss_pred H
Q 018408 246 M 246 (356)
Q Consensus 246 ~ 246 (356)
.
T Consensus 378 ~ 378 (379)
T TIGR00881 378 A 378 (379)
T ss_pred c
Confidence 4
No 165
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.27 E-value=3.3e-10 Score=104.21 Aligned_cols=148 Identities=14% Similarity=-0.000 Sum_probs=108.8
Q ss_pred hHHHHHHHhCCCCChhHHHHHHHHHH-HHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHH------hhhHHHHH
Q 018408 109 PIVSIAKELGFEGNPILEGLVVSIFI-AGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQ------AHSLDEML 181 (356)
Q Consensus 109 ~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~------~~~~~~~~ 181 (356)
..+.+.++.|+ +..+.+++..... .+..++.++.|++.||+|+|+.+..+..+.++..+.... .++...++
T Consensus 230 ~~~~~l~~~G~--s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (390)
T TIGR02718 230 LSKLYLVDAGW--PLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAW 307 (390)
T ss_pred HhhHHHHhcCC--CHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHH
Confidence 34445566788 5666888777765 466778899999999999999988877665333322221 12233334
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHhhcCC-CccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHH
Q 018408 182 WGRFLVGLGIGVNTVLVPIYISEVAPT-KYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILAL 259 (356)
Q Consensus 182 ~~~~l~G~~~g~~~~~~~~~~~e~~p~-~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~ 259 (356)
....+.+++.+...+.....+.+..++ +.+++.+++.+....+|..++|.+++.+.+..| ++..|++.+++.++..+
T Consensus 308 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G-~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 308 SCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFG-YAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHH
Confidence 445556677777777777787777776 889999999999999999999999999998877 88888887776666544
No 166
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.25 E-value=5.8e-10 Score=101.51 Aligned_cols=168 Identities=10% Similarity=-0.017 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhch---hHHHHH-hHHHHH
Q 018408 90 LIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGC---RRTFQI-DTIPLI 165 (356)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr---r~~~~~-~~~~~~ 165 (356)
+.+.+..+........+..++|.+.++.|++ .. .+...++..++..++ .++++||..| |+.... ..++.+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s--~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a 268 (368)
T TIGR00903 195 WIIGAILGFGVALFDNLAIWLEAALRPAGLE--DI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIA 268 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--hH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHH
Confidence 3443444444444445556778777877874 32 444444444444444 5778887754 333332 334444
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHH
Q 018408 166 LGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRT 245 (356)
Q Consensus 166 i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~ 245 (356)
+.....+...+....++.-++.|++....++..+.+.+|.+|++.||+++|+.+....+|+.++|.+.+.+.. + ...
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~-~~~ 345 (368)
T TIGR00903 269 AFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--S-AEA 345 (368)
T ss_pred HHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--C-HHH
Confidence 4444444444444445556667777777778888899999999999999999999999999999988876663 4 667
Q ss_pred HHHHhHHHHHHHHHHhhcccC
Q 018408 246 MLYIASLPGFILALGMQFTVE 266 (356)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~e 266 (356)
.|.+.+++.+++.+...++++
T Consensus 346 ~f~~~~~~~~i~~~~~~~~~~ 366 (368)
T TIGR00903 346 YFTFLAILITIAFAIALLLPN 366 (368)
T ss_pred HHHHHHHHHHHHHHHHHhCCC
Confidence 777777777766655544454
No 167
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.25 E-value=2.3e-10 Score=103.89 Aligned_cols=136 Identities=15% Similarity=0.083 Sum_probs=104.9
Q ss_pred chhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhh-chhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHH
Q 018408 106 MNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL-GCRRTFQIDTIPLILGAIISAQAHSLDEMLWGR 184 (356)
Q Consensus 106 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 184 (356)
....+|.+.++.|. +..+.+.+.+.+.++.+++.++.|+++||+ +||+.+.++.++.+++.++..+.++..... ..
T Consensus 216 ~~~~lp~~~~~~g~--~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 292 (355)
T TIGR00896 216 LIGWLPAILISHGA--SAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WA 292 (355)
T ss_pred HHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HH
Confidence 34556767777787 556688999999999999999999999999 566677777777777776666655433222 45
Q ss_pred HHHHhhhhhhhhHHHHHHHhhcC-CCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhH
Q 018408 185 FLVGLGIGVNTVLVPIYISEVAP-TKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWR 244 (356)
Q Consensus 185 ~l~G~~~g~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~ 244 (356)
++.|++.+...+.....+.+..+ +++++...++.+....+|..++|.+.+.+.++.++|.
T Consensus 293 ~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 293 LVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred HHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 67899998888887777765554 5667888999888889999999999999988776553
No 168
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.23 E-value=9.8e-10 Score=100.81 Aligned_cols=150 Identities=14% Similarity=0.112 Sum_probs=107.2
Q ss_pred HHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHH-hhhHHHHHHHHHHHH
Q 018408 110 IVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQ-AHSLDEMLWGRFLVG 188 (356)
Q Consensus 110 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~l~G 188 (356)
.|++.+.+|. +..+.+++.+...++..++.++.|++.||+|+|+.+..+..+.+++.++... .++.+..++..++.+
T Consensus 223 ~~~~~~~~g~--s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 300 (382)
T PRK10091 223 KPYMMFISGF--SETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICC 300 (382)
T ss_pred HHHHHHhcCC--CHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4566666788 5566889999999999999999999999999999999888887777765543 445555555666666
Q ss_pred hhhhhhhhHHHH-HHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHhhc
Q 018408 189 LGIGVNTVLVPI-YISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQF 263 (356)
Q Consensus 189 ~~~g~~~~~~~~-~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~ 263 (356)
++.++..+.... ...+..+.+.++.. ..+....+|..++|.+++.+.+..++|++.+.+.++..++.+....+
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (382)
T PRK10091 301 AGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLL 374 (382)
T ss_pred HHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHH
Confidence 665544443333 33444444444443 34677889999999999999886545999999887766665544433
No 169
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.22 E-value=2.1e-09 Score=99.01 Aligned_cols=145 Identities=14% Similarity=0.017 Sum_probs=110.6
Q ss_pred HHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Q 018408 110 IVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGL 189 (356)
Q Consensus 110 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~ 189 (356)
.|.+.+++|+ +....+.+...+.++..++.++.+++.||.+++..+....+...+..++....++.+.+.+..++.|+
T Consensus 240 ~p~~~~~~g~--s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~ 317 (394)
T PRK10213 240 RPVYMNLAGF--GVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGL 317 (394)
T ss_pred HHHHHHhcCC--ChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 4777778888 45558888888999999999999999999654443443333334434444455667777778889999
Q ss_pred hhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHH
Q 018408 190 GIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILA 258 (356)
Q Consensus 190 ~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~ 258 (356)
+.+...+....++.+..| +++++..++......+|..+|+.+++.+.+..| ++..++.+++..++..
T Consensus 318 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g-~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 318 TFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIG-LTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hhhHHHHHHHHHHHHH
Confidence 999888888888998887 456777888888889999999999999999877 8887777766554443
No 170
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.22 E-value=4.8e-10 Score=117.16 Aligned_cols=143 Identities=20% Similarity=0.174 Sum_probs=116.8
Q ss_pred HHHHHHhCCCCChh-HHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Q 018408 111 VSIAKELGFEGNPI-LEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGL 189 (356)
Q Consensus 111 ~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~ 189 (356)
+++.+.+|+ +.. ..+++.+...++.+++.++.|+++||+++++.+.++.++.+++.++..+..+.+.++++.++.|+
T Consensus 257 ~~~~~~~g~--s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 334 (1146)
T PRK08633 257 AYAKEVLGL--DNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGF 334 (1146)
T ss_pred HHHHHHhCC--CcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 355667888 444 68899999999999999999999999999999988888888888888888888888888999999
Q ss_pred hhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHH
Q 018408 190 GIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGF 255 (356)
Q Consensus 190 ~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~ 255 (356)
+.++..+...+++.+.+|++.||+++++.++...+|.++++.+++.+.....++...+++.+.+.+
T Consensus 335 ~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 400 (1146)
T PRK08633 335 SAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTL 400 (1146)
T ss_pred HHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 999988889999999999999999999999999999888877776654321125555555444433
No 171
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.22 E-value=2.6e-09 Score=97.88 Aligned_cols=171 Identities=17% Similarity=0.157 Sum_probs=116.9
Q ss_pred HHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhc-hhHHHHHhHHHHHHHHHHHH
Q 018408 94 MSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLG-CRRTFQIDTIPLILGAIISA 172 (356)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-rr~~~~~~~~~~~i~~~~~~ 172 (356)
..++...+..+.+.+..+.+.++.|+ +..++|.+.+...+..+++++++|.++||.+ +|+.+.+..++.++......
T Consensus 9 ~~~f~~f~~~G~~~p~~~~~L~~~G~--s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~ 86 (400)
T PF03825_consen 9 LMYFLYFFAYGAFLPYLPLYLESRGF--SGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLA 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 33444445555666777888888998 7788999999999999999999999999985 57777777777777777777
Q ss_pred HhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHh-hhccCCCC--chhHHHHHH
Q 018408 173 QAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFL-GIPAEDDP--HWWRTMLYI 249 (356)
Q Consensus 173 ~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i-~~~l~~~~--~~w~~~~~~ 249 (356)
..++++.+++..++..+......+...++..+... +++.-.|-.-.++++|-+++... ...+.... ++....+++
T Consensus 87 ~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i 164 (400)
T PF03825_consen 87 FSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYI 164 (400)
T ss_pred HhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHH
Confidence 78888888888888888887777888877777765 33444455555555555555332 11111111 113345566
Q ss_pred hHHHHHHHHHHhhcccCCh
Q 018408 250 ASLPGFILALGMQFTVESP 268 (356)
Q Consensus 250 ~~~~~~~~~~~~~~~~e~p 268 (356)
.++..++.....+.+|++|
T Consensus 165 ~~~~~~ll~~~~l~lp~~~ 183 (400)
T PF03825_consen 165 AAILSLLLAGFALFLPKTP 183 (400)
T ss_pred HHHHHHHHHHHHHhCCCCc
Confidence 6655555555556678765
No 172
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.21 E-value=2.3e-09 Score=99.21 Aligned_cols=144 Identities=14% Similarity=0.123 Sum_probs=108.7
Q ss_pred HHH-HHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHh-----hhHHHHHHH
Q 018408 110 IVS-IAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA-----HSLDEMLWG 183 (356)
Q Consensus 110 ~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~ 183 (356)
.|. +.+++|+ ++.+.++......++..++.++.|+++||+|+|+.+.++.++.+++.++..+. .+...+++.
T Consensus 238 ~p~~~~~~~g~--~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 315 (406)
T PRK15402 238 SPVILISGEQL--SSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAG 315 (406)
T ss_pred hHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHH
Confidence 344 4566787 56667777777778889999999999999999999998888777777666543 245566777
Q ss_pred HHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHH
Q 018408 184 RFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFIL 257 (356)
Q Consensus 184 ~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~ 257 (356)
.++.|++.+...+........ .++++||+..+++++...+|..+++.+.+.+.+..+ +....+..++..++.
T Consensus 316 ~~~~g~g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~-~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 316 LSLYAFGIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGG-NGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHHHHHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCc-hHHHHHHHHHHHHHH
Confidence 888999888877666655443 345889999999999999999999999999988877 444444444444433
No 173
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.21 E-value=4.2e-10 Score=94.49 Aligned_cols=155 Identities=15% Similarity=0.121 Sum_probs=114.5
Q ss_pred hhHHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHH
Q 018408 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (356)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 163 (356)
...+.+.++++.+....+-+...++ ..+++.+|+ ++..++.+.+.......+.+++.|.++||+|++...+.+..+
T Consensus 264 ppfw~~~iicv~yyva~fPFi~lg~--~fF~~rfGl--S~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~ 339 (459)
T KOG4686|consen 264 PPFWVLVIICVLYYVAWFPFITLGP--MFFQKRFGL--SAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACI 339 (459)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhH--HHHHHhhCC--ChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHH
Confidence 3345555666655544443333332 357888999 555577788887777888899999999999999888876554
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchh
Q 018408 164 LILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWW 243 (356)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w 243 (356)
..+..-.. +.-+.+.=++...+.|+.........+..++-+.|.++-|++.|..+...++|-.+.|++++.+.++.|++
T Consensus 340 ~tl~~H~~-l~Ft~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y 418 (459)
T KOG4686|consen 340 LTLLGHSG-LFFTFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSY 418 (459)
T ss_pred HHHHHhhh-HHhhhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCch
Confidence 44433221 12233333556778899888888888889999999999999999999999999999999999999987753
No 174
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.21 E-value=5.7e-10 Score=102.97 Aligned_cols=151 Identities=12% Similarity=0.043 Sum_probs=111.9
Q ss_pred hhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhh-hhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 018408 108 GPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLAD-KLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFL 186 (356)
Q Consensus 108 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 186 (356)
...|.+.++.+. ++...+++.+...++...+..+.+++.| |++.++.+..+.++.+++.++.+..++++.+++..++
T Consensus 229 ~~~p~~~~~~~~--~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l 306 (400)
T PRK11646 229 LMLPIMVNDIAG--SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICL 306 (400)
T ss_pred HhhhhhHHhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 345666666554 3445777777776666655555566655 5676777777888888888777778888777777788
Q ss_pred HHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCch---hHHHHHHhHHHHHHHHHH
Q 018408 187 VGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHW---WRTMLYIASLPGFILALG 260 (356)
Q Consensus 187 ~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~---w~~~~~~~~~~~~~~~~~ 260 (356)
.+++.+...+....++.+..|+++||+.+|+++....+|..++|.+++.+.++.++ ....+++.++..++..+.
T Consensus 307 ~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 307 FYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 88888888888889999999999999999999999999999999999999876421 234555555555555444
No 175
>PRK09848 glucuronide transporter; Provisional
Probab=99.20 E-value=3.8e-10 Score=105.80 Aligned_cols=128 Identities=14% Similarity=0.078 Sum_probs=96.8
Q ss_pred hHHHHH-HHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhh--hHHHHHHHHH
Q 018408 109 PIVSIA-KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH--SLDEMLWGRF 185 (356)
Q Consensus 109 ~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~ 185 (356)
..|++. +.+|. +....++......++..++.++.+++.||+|+|+.+.++.++.+++.++..+.+ +.+.+++..+
T Consensus 250 ~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~ 327 (448)
T PRK09848 250 SSLFYVRYVLND--TGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALA 327 (448)
T ss_pred hheeeEeeecCC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHH
Confidence 344333 34554 343344444444567788999999999999999999999988888877776643 5666667788
Q ss_pred HHHhhhhhhhhHHHHHHHhhcCCC-------ccchhHHHhHHHHHHHHHHHHHhhhccCC
Q 018408 186 LVGLGIGVNTVLVPIYISEVAPTK-------YRGSLGTLCQVGTCLGIITSLFLGIPAED 238 (356)
Q Consensus 186 l~G~~~g~~~~~~~~~~~e~~p~~-------~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 238 (356)
+.|++.+...+...++.+|..|.+ .+|...+++++...+|..+++.+.+.+.+
T Consensus 328 l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~ 387 (448)
T PRK09848 328 IASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILG 387 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999998888753 45888999999999999998888776543
No 176
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.19 E-value=1.9e-09 Score=98.74 Aligned_cols=133 Identities=18% Similarity=0.312 Sum_probs=97.3
Q ss_pred HHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHh-----hhHHHHHHHHHH
Q 018408 112 SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA-----HSLDEMLWGRFL 186 (356)
Q Consensus 112 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~l 186 (356)
.+.+++|. ++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+..++.++.... ++...+++..++
T Consensus 232 ~~~~~~g~--~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (385)
T TIGR00710 232 VYIDIMGV--SPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMF 309 (385)
T ss_pred HHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 34457787 56668888999999999999999999999999999988887777776665543 233445556778
Q ss_pred HHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHH-HHHHHHHhhhccCCCCchhHHHHHH
Q 018408 187 VGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCL-GIITSLFLGIPAEDDPHWWRTMLYI 249 (356)
Q Consensus 187 ~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~-g~~~~~~i~~~l~~~~~~w~~~~~~ 249 (356)
.|++.+...+....+..|..| ++|+++.++.+..... |...++.++ .+.+..+ |...+..
T Consensus 310 ~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~-~~~~~~~-~~~~~~~ 370 (385)
T TIGR00710 310 VGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS-LIHGNTA-WPMSLSC 370 (385)
T ss_pred HHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH-hccccCh-HHHHHHH
Confidence 889888888888888888887 5799999998766654 555555544 4433333 5444433
No 177
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.19 E-value=1.2e-09 Score=100.14 Aligned_cols=170 Identities=16% Similarity=0.221 Sum_probs=125.6
Q ss_pred HHHHHHhhhhcchhhHHHHHHHhC-CCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHH
Q 018408 95 SNFLFGYHIGVMNGPIVSIAKELG-FEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQ 173 (356)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~ 173 (356)
..+..+.....+..+.+.+.++.| .+ ....+.+.++..++-++.-...+++..|+|.|+++.++.+..++=..+.++
T Consensus 215 ~~~l~~~~~~~~~~f~~~yl~~~gg~~--~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~ 292 (400)
T PF03825_consen 215 AAFLIGISHAAYYTFFSIYLQELGGYS--GSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAY 292 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccch--hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 334445555555666666777777 53 333566666666677788889999999999999999999999999988887
Q ss_pred h-hhHHHHHH----HHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhH-HHHHHHHHHHHHhhhccCCCCch-----
Q 018408 174 A-HSLDEMLW----GRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQ-VGTCLGIITSLFLGIPAEDDPHW----- 242 (356)
Q Consensus 174 ~-~~~~~~~~----~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~-~~~~~g~~~~~~i~~~l~~~~~~----- 242 (356)
. ++.+..++ ...+.|+..+........|+.+.+|++.|+++.++++ +...+|..+|..++|.+.++.+.
T Consensus 293 ~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~ 372 (400)
T PF03825_consen 293 FSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFD 372 (400)
T ss_pred hcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhh
Confidence 7 45444333 3456999999999999999999999999999999976 46789999999999999987651
Q ss_pred hHHHHHHhHHHHHHHHHH-hhcccC
Q 018408 243 WRTMLYIASLPGFILALG-MQFTVE 266 (356)
Q Consensus 243 w~~~~~~~~~~~~~~~~~-~~~~~e 266 (356)
|...+.+.+.+.++..++ +++++|
T Consensus 373 ~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 373 WSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccC
Confidence 444555555554444433 333444
No 178
>PRK10054 putative transporter; Provisional
Probab=99.19 E-value=4.6e-10 Score=103.43 Aligned_cols=135 Identities=13% Similarity=0.013 Sum_probs=107.1
Q ss_pred ChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHh-hhHHHHHHHHHHHHhhhhhhhhHHHH
Q 018408 122 NPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA-HSLDEMLWGRFLVGLGIGVNTVLVPI 200 (356)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~l~G~~~g~~~~~~~~ 200 (356)
+....+++.+...+......++.|++.||+++|+.+..+.++.+++.+...+. ++.+.+++..++.|++.+...+....
T Consensus 242 ~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~ 321 (395)
T PRK10054 242 AEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYM 321 (395)
T ss_pred HHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 44456677777766666777888999999999999999988888887777654 56666777888999998888888888
Q ss_pred HHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHH
Q 018408 201 YISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILA 258 (356)
Q Consensus 201 ~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~ 258 (356)
++.+..|++.|+++.+..+ ...+|..++|.+++.+.++.+ ....|++.+....+..
T Consensus 322 ~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g-~~~~~~~~~~~~~~~~ 377 (395)
T PRK10054 322 LIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLP-PWSLFVILALAIVAAW 377 (395)
T ss_pred HHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcC-hhhHHHHHHHHHHHHH
Confidence 9999999999999988765 556899999999999999887 6667766544444333
No 179
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.18 E-value=5.2e-10 Score=116.73 Aligned_cols=144 Identities=15% Similarity=0.054 Sum_probs=113.1
Q ss_pred hhHHHH-HHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHh------------
Q 018408 108 GPIVSI-AKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA------------ 174 (356)
Q Consensus 108 ~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~------------ 174 (356)
..+|.+ .+.+|. +....+++.+.+.+|.++|.++.|+++++.++++.+..+.++.+++.+.+++.
T Consensus 246 ~~~p~~~~~~~g~--~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 323 (1140)
T PRK06814 246 SQLPLLAKETLGG--DENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLK 323 (1140)
T ss_pred HHhHHHHHHHcCC--chHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhccccccccccccc
Confidence 344544 455787 56669999999999999999999999998887776666666655555544432
Q ss_pred --------hhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHH
Q 018408 175 --------HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTM 246 (356)
Q Consensus 175 --------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~ 246 (356)
.+.+.++++.++.|++.+...+...+++.+.+|++.||+++|+.++...+|..+++++.+.+.+...++...
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~ 403 (1140)
T PRK06814 324 SILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWI 403 (1140)
T ss_pred chhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHH
Confidence 566777788889999999999999999999999999999999999999999999999988886433336666
Q ss_pred HHHhHHH
Q 018408 247 LYIASLP 253 (356)
Q Consensus 247 ~~~~~~~ 253 (356)
+++.++.
T Consensus 404 ~~~~~~~ 410 (1140)
T PRK06814 404 ILFIALA 410 (1140)
T ss_pred HHHHHHH
Confidence 6654444
No 180
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.18 E-value=4.7e-10 Score=105.82 Aligned_cols=116 Identities=16% Similarity=0.037 Sum_probs=88.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHH-----hhhHHHHHHHHHHHHhhhhhhhhH
Q 018408 123 PILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQ-----AHSLDEMLWGRFLVGLGIGVNTVL 197 (356)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~~~l~G~~~g~~~~~ 197 (356)
....+++.+...++.+++.++.++++||+|+|+.+.++.++.+++.+.... ..+.+.+++.-++.|++.+...+.
T Consensus 265 ~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~ 344 (473)
T PRK10429 265 ADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVL 344 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 334566667667888999999999999999999998888776666555432 235566667778889999999999
Q ss_pred HHHHHHhhcC-------CCccchhHHHhHHHHHHHHHHHHHhhhccCC
Q 018408 198 VPIYISEVAP-------TKYRGSLGTLCQVGTCLGIITSLFLGIPAED 238 (356)
Q Consensus 198 ~~~~~~e~~p-------~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 238 (356)
..++++|..+ .+..|...++..+..-+|..+++.+.+.+.+
T Consensus 345 ~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~ 392 (473)
T PRK10429 345 QVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLG 392 (473)
T ss_pred HHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999965 2334557788888888888888887776554
No 181
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.17 E-value=2.2e-10 Score=106.77 Aligned_cols=156 Identities=20% Similarity=0.214 Sum_probs=115.4
Q ss_pred hHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhh----hhchhHHHHH-hHHHHHHHHHHHHHh-h-------
Q 018408 109 PIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLAD----KLGCRRTFQI-DTIPLILGAIISAQA-H------- 175 (356)
Q Consensus 109 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~Grr~~~~~-~~~~~~i~~~~~~~~-~------- 175 (356)
..+++.+.+|+ ++...|.+..+.-+..++..++.|.++| |+||||.+++ +.+..+++.+++... +
T Consensus 24 ~~~f~~~~~gl--~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~ 101 (428)
T PF13347_consen 24 LLYFYTDVLGL--SPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTA 101 (428)
T ss_pred HHHHHHHHcCC--CHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhh
Confidence 34566777798 6677888888888888888999999999 7998876664 777777777777655 3
Q ss_pred hHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCC-CccchhHHHhHHHHHHHHHHHHHhhhccCCCCc------hhHHHHH
Q 018408 176 SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPT-KYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH------WWRTMLY 248 (356)
Q Consensus 176 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~-~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~------~w~~~~~ 248 (356)
....+++..++..++.........++..|+.+. ++|.+..+.-..+..+|.++...+.+.+.+..+ +|++..+
T Consensus 102 ~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~ 181 (428)
T PF13347_consen 102 KLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMAL 181 (428)
T ss_pred HHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHH
Confidence 123345666777888888888889999999984 789999999888888888766666665553222 4888888
Q ss_pred HhHHHHHHHHHHh-hcccC
Q 018408 249 IASLPGFILALGM-QFTVE 266 (356)
Q Consensus 249 ~~~~~~~~~~~~~-~~~~e 266 (356)
+.+++.++..+.. +..+|
T Consensus 182 v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 182 VLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHHhhhhhheeee
Confidence 8777766665443 44555
No 182
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.15 E-value=8.9e-10 Score=101.83 Aligned_cols=133 Identities=9% Similarity=-0.135 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHH-Hh-----hhHHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 018408 130 VSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISA-QA-----HSLDEMLWGRFLVGLGIGVNTVLVPIYIS 203 (356)
Q Consensus 130 ~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~-~~-----~~~~~~~~~~~l~G~~~g~~~~~~~~~~~ 203 (356)
..+..+...+..+++|+++||+|+++++.++.++..++..... .. .+++.+.+..+...++.|........++.
T Consensus 292 ~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip 371 (462)
T PRK15034 292 AFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIA 371 (462)
T ss_pred HHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhH
Confidence 3344566788889999999999999999998887777764422 22 24555666555566666777777777888
Q ss_pred hhcCC---------------------CccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHhh
Q 018408 204 EVAPT---------------------KYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQ 262 (356)
Q Consensus 204 e~~p~---------------------~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~ 262 (356)
.++|. ++-|...|+......+|+++.|.+.+...+..|++...|+...+..++++++.+
T Consensus 372 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w 451 (462)
T PRK15034 372 VIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTW 451 (462)
T ss_pred HHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 88874 145678888899999999999988777777777788888888777776665433
No 183
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.15 E-value=3.2e-10 Score=100.62 Aligned_cols=153 Identities=14% Similarity=0.073 Sum_probs=119.6
Q ss_pred hhhHH-HHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHh-------hhHH
Q 018408 107 NGPIV-SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA-------HSLD 178 (356)
Q Consensus 107 ~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~-------~~~~ 178 (356)
+..+| ++.++||. ++...+.+...+.+...+..+.+|+++||+|.+|++.+....++++..+..+. .+..
T Consensus 238 s~~l~~~~~~~fg~--~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~ 315 (417)
T COG2223 238 SAYLPMYLVTQFGL--SPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFV 315 (417)
T ss_pred HHHHHHHHHHhcCC--ChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchH
Confidence 34444 56778898 55558888999999999999999999999999999999999999888887765 3444
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHH
Q 018408 179 EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILA 258 (356)
Q Consensus 179 ~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~ 258 (356)
..++..+..+++.|.....+..++..++|. +-|...|+......+|+..-|...+...+..+.+...|++.....+++.
T Consensus 316 ~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~ 394 (417)
T COG2223 316 VFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVAL 394 (417)
T ss_pred HHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 455545555555555556666677777765 5789999999999999999999888888888879999998887777776
Q ss_pred HHhh
Q 018408 259 LGMQ 262 (356)
Q Consensus 259 ~~~~ 262 (356)
+...
T Consensus 395 v~~~ 398 (417)
T COG2223 395 VLTW 398 (417)
T ss_pred HHHH
Confidence 6443
No 184
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.15 E-value=1.7e-09 Score=99.97 Aligned_cols=145 Identities=14% Similarity=0.093 Sum_probs=100.6
Q ss_pred HHHHHHhCCCCChhHHHHHHHHHH-HHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHH---HHh-hhHHHHHHHHH
Q 018408 111 VSIAKELGFEGNPILEGLVVSIFI-AGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIIS---AQA-HSLDEMLWGRF 185 (356)
Q Consensus 111 ~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~---~~~-~~~~~~~~~~~ 185 (356)
+.+.+++|+ +..+.+++..... ++..++.+++|++.||+|+|+.+.++.++.++..+.. ++. ++.+.+++..+
T Consensus 234 ~~l~~~~G~--~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 311 (402)
T PRK11902 234 TFLIRGAGF--SAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIG 311 (402)
T ss_pred HHHHHhcCC--CHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 456677888 5666788776544 4688999999999999999998877776666554433 333 34455554443
Q ss_pred ----HHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHh
Q 018408 186 ----LVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGM 261 (356)
Q Consensus 186 ----l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~ 261 (356)
+.|++.+...+....++.+.+|.+. .++++....+|..+++.+++.+.+..| |+..|.+.++++++.+++.
T Consensus 312 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~l~~~~G-~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 312 IENLCGGMGTAAFVALLMALCNRSFSATQ----YALLSALASVGRVYVGPTSGYLVEAYG-WPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHH
Confidence 4555566666666667666666544 455555566777766778888888888 9999999888877766554
Q ss_pred h
Q 018408 262 Q 262 (356)
Q Consensus 262 ~ 262 (356)
.
T Consensus 387 ~ 387 (402)
T PRK11902 387 W 387 (402)
T ss_pred H
Confidence 3
No 185
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.14 E-value=2e-09 Score=97.78 Aligned_cols=118 Identities=17% Similarity=0.121 Sum_probs=93.0
Q ss_pred hcchhhHHHHHHHhCCCCChhHHHHHHHHHH-HHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHh--------
Q 018408 104 GVMNGPIVSIAKELGFEGNPILEGLVVSIFI-AGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA-------- 174 (356)
Q Consensus 104 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~-------- 174 (356)
.......|.+.+++|+ +..+.+.+..... ++..++.+++|++.||+|||+.++++.++.+++..+..+.
T Consensus 226 ~~~~~~~~~~l~~~g~--~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (356)
T TIGR00901 226 SAATVLTTLFLLDMGF--SKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDG 303 (356)
T ss_pred HHHHHHHHHHHHHcCC--CHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 3344455666566887 5666777776655 5778999999999999999999988888887776655443
Q ss_pred ---hhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHH
Q 018408 175 ---HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTC 223 (356)
Q Consensus 175 ---~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 223 (356)
++.+.++.+.++.+++.+...+...+++.|.+|+++||+.+|+++...+
T Consensus 304 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 304 ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 3456677778889999999999999999999999999999999876543
No 186
>PRK09669 putative symporter YagG; Provisional
Probab=99.13 E-value=1e-09 Score=102.80 Aligned_cols=149 Identities=13% Similarity=0.091 Sum_probs=103.5
Q ss_pred hHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhh----hchhHH-HHHhHHHHHHHHHHHHHhhh------H
Q 018408 109 PIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK----LGCRRT-FQIDTIPLILGAIISAQAHS------L 177 (356)
Q Consensus 109 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr~~-~~~~~~~~~i~~~~~~~~~~------~ 177 (356)
...++.+.+|+ +....|.+..+.-+...+..++.|+++|| +||||. ++.+.+..+++.++....++ .
T Consensus 32 l~~~~t~~~gl--s~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~ 109 (444)
T PRK09669 32 LAYFYTDVFGL--SAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKI 109 (444)
T ss_pred HHHHHHHhcCC--CHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHH
Confidence 34566778898 67779999999999999999999999999 788655 44566777666655544432 3
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHhhcC-CCccchhHHHhHHHHHHHHHHHHHhhh----ccCC---CCchhHHHHHH
Q 018408 178 DEMLWGRFLVGLGIGVNTVLVPIYISEVAP-TKYRGSLGTLCQVGTCLGIITSLFLGI----PAED---DPHWWRTMLYI 249 (356)
Q Consensus 178 ~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~~g~~~~~~i~~----~l~~---~~~~w~~~~~~ 249 (356)
..+++..++.+.+.........++.+|+.+ +++|.+..++...+..+|..+++.+.. .+.. ..+ |+..+.+
T Consensus 110 ~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g-~~~~~~i 188 (444)
T PRK09669 110 IYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKG-YFYAMMV 188 (444)
T ss_pred HHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhh-HHHHHHH
Confidence 444555566677776777777788999884 577998888877777777666654332 2221 123 8877777
Q ss_pred hHHHHHHHHHH
Q 018408 250 ASLPGFILALG 260 (356)
Q Consensus 250 ~~~~~~~~~~~ 260 (356)
.+++.++..+.
T Consensus 189 ~~ii~~v~~~~ 199 (444)
T PRK09669 189 MGLLGVVLFFC 199 (444)
T ss_pred HHHHHHHHHHH
Confidence 66665555443
No 187
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.13 E-value=9.8e-10 Score=104.02 Aligned_cols=131 Identities=17% Similarity=0.152 Sum_probs=108.6
Q ss_pred hhhHHHHH-HHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHH----hhhHHHHH
Q 018408 107 NGPIVSIA-KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQ----AHSLDEML 181 (356)
Q Consensus 107 ~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~----~~~~~~~~ 181 (356)
...+|.+. +.+|+ +..+.++......++..++.++.|++.||+|||+.+.++..+.+++..+..+ ..+.+.++
T Consensus 275 ~~~~p~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (485)
T TIGR00711 275 FYLLPLYLQQVLGY--TALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIA 352 (485)
T ss_pred HHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHH
Confidence 34455554 45687 5667899999999999999999999999999999999998888888877662 13456666
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCC
Q 018408 182 WGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD 239 (356)
Q Consensus 182 ~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 239 (356)
...++.|++.+...+.......+..|+++|+.+.++.+....+|..+++.+.+.+.++
T Consensus 353 ~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 353 LPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788899999988877777888889999999999999999999999999998877654
No 188
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.12 E-value=1e-09 Score=99.03 Aligned_cols=126 Identities=31% Similarity=0.420 Sum_probs=104.1
Q ss_pred hcchhhHHHH-HHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHh---hhHHH
Q 018408 104 GVMNGPIVSI-AKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA---HSLDE 179 (356)
Q Consensus 104 ~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~---~~~~~ 179 (356)
.......|.+ .+.+|.+ +..+.+++.+...++..++.++.|++.||+|+|+.+.+......+..+...+. .+...
T Consensus 223 ~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (352)
T PF07690_consen 223 SGFSFFLPLYLQEVLGFS-GPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVW 301 (352)
T ss_dssp HHHHHHHHHHCCHHHHCC-THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHH
T ss_pred HHhhcccchhhhhccCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 3355556665 7888884 25668888999999999999999999999999888777777766666665443 34566
Q ss_pred HHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHH
Q 018408 180 MLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSL 230 (356)
Q Consensus 180 ~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~ 230 (356)
.++..++.|++.+...+....++.|.+|+++||++.|+.+....+|..++|
T Consensus 302 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 302 LIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 777888899999999999999999999999999999999999999999987
No 189
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.10 E-value=2.1e-09 Score=100.18 Aligned_cols=146 Identities=20% Similarity=0.132 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHhhhhcchhhHHHHHHH-hCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHH
Q 018408 90 LIASMSNFLFGYHIGVMNGPIVSIAKE-LGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (356)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 168 (356)
..+.+..+.........+...+++.++ +|. +...+.+..+..++..++.+++++++||+|+|+.+..+.++.+++.
T Consensus 228 ~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~---~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~ 304 (428)
T PF13347_consen 228 RILLLAFFLQWLAFALMNTFLPYYFTYVLGN---EGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGF 304 (428)
T ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHHHhcC---chhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHH
Confidence 333444444444555555555666555 443 2346777888899999999999999999999999999999999999
Q ss_pred HHHHHhh--hHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCC-------CccchhHHHhHHHHHHHHHHHHHhhhccCC
Q 018408 169 IISAQAH--SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPT-------KYRGSLGTLCQVGTCLGIITSLFLGIPAED 238 (356)
Q Consensus 169 ~~~~~~~--~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~-------~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 238 (356)
++..+.+ +.+.+++..++.|++.+..+....++++|..+. +..|...++.++...+|..+++.+.+.+.+
T Consensus 305 ~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~ 383 (428)
T PF13347_consen 305 LLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLA 383 (428)
T ss_pred HHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHH
Confidence 9888876 899999999999999999999999999998873 335788888888888888888887776543
No 190
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.10 E-value=4.7e-10 Score=101.39 Aligned_cols=169 Identities=18% Similarity=0.166 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHHhhhhcchhhHHHHHH-HhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHH-
Q 018408 89 VLIASMSNFLFGYHIGVMNGPIVSIAK-ELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLIL- 166 (356)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i- 166 (356)
.+..+...+...+..+...+..+...+ ..|+ +.++.|.+.++..+...+.+++.|.++||+|.||-++.......+
T Consensus 9 ~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GL--s~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l 86 (412)
T PF01306_consen 9 YWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGL--SGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLL 86 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccccCC--CHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHH
Confidence 344455555555666666676665554 5899 778899999999999999999999999999977765543322221
Q ss_pred -HHHHH-HHh----hhH-HHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCC
Q 018408 167 -GAIIS-AQA----HSL-DEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD 239 (356)
Q Consensus 167 -~~~~~-~~~----~~~-~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 239 (356)
+.... .+. .|. ...+++-+..|++.....++.-+++.++. ++.+.=.|-.-+++++|.+++..++|.+.+.
T Consensus 87 ~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i 164 (412)
T PF01306_consen 87 FGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNI 164 (412)
T ss_dssp CHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeee
Confidence 22111 122 232 22333344455555556666666655543 3345555667788999999999999988764
Q ss_pred CchhHHHHHHhHHHHHHHHHHhhc
Q 018408 240 PHWWRTMLYIASLPGFILALGMQF 263 (356)
Q Consensus 240 ~~~w~~~~~~~~~~~~~~~~~~~~ 263 (356)
. -...|+++....++..++.++
T Consensus 165 ~--p~~~fwi~s~~~~il~lll~~ 186 (412)
T PF01306_consen 165 N--PNIIFWIASAAAIILLLLLLL 186 (412)
T ss_dssp H--HHHHHHHHHHHHHHHHHHHHS
T ss_pred C--ccHHHHHHHHHHHHHHHHHHH
Confidence 2 456777766555555444433
No 191
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.08 E-value=4.5e-09 Score=99.22 Aligned_cols=167 Identities=11% Similarity=0.046 Sum_probs=108.0
Q ss_pred HHhhhhcchhhH-HHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhh----hhchhH-HHHHhHHHHHHHHHHHH
Q 018408 99 FGYHIGVMNGPI-VSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLAD----KLGCRR-TFQIDTIPLILGAIISA 172 (356)
Q Consensus 99 ~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~Grr~-~~~~~~~~~~i~~~~~~ 172 (356)
.++.......++ .++.+.+|+ +....|.+..+.-+.-++..++.|.++| |+|||| .++++.+..+++.+++.
T Consensus 18 ~~~~~~~~~~~l~~yyt~v~Gl--s~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf 95 (473)
T PRK10429 18 KDFAIGIVYMYLMYYYTDVVGL--SVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLF 95 (473)
T ss_pred HhHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHH
Confidence 333333444444 455666788 6777999999988889999999999999 569955 55557777777765554
Q ss_pred Hhhh------HHHHHHHHHHHHhhhhhhhhHHHHHHHhhc-CCCccchhHHHhHHHHHHHHHHHHHhhhcc----C--CC
Q 018408 173 QAHS------LDEMLWGRFLVGLGIGVNTVLVPIYISEVA-PTKYRGSLGTLCQVGTCLGIITSLFLGIPA----E--DD 239 (356)
Q Consensus 173 ~~~~------~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l----~--~~ 239 (356)
..++ +..+++..++.+++.........++..|+. ++++|.+..++-..+..+|+.+.+.+...+ . +.
T Consensus 96 ~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~ 175 (473)
T PRK10429 96 SAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDR 175 (473)
T ss_pred cCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCch
Confidence 4321 233444556677888888888888999998 578899988886666666655544433221 1 11
Q ss_pred CchhHHHHHHhHHHHHHHHHH-hhcccCC
Q 018408 240 PHWWRTMLYIASLPGFILALG-MQFTVES 267 (356)
Q Consensus 240 ~~~w~~~~~~~~~~~~~~~~~-~~~~~e~ 267 (356)
..+|+....+.+++.++..+. .+..+|.
T Consensus 176 ~~g~~~~~~i~~~~~~~~~~~~~~~~~e~ 204 (473)
T PRK10429 176 GFGFQMFTLVLIAFFIVSTIITLRNVHEV 204 (473)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCceec
Confidence 112676666666555544433 3335554
No 192
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.07 E-value=2.1e-08 Score=88.03 Aligned_cols=153 Identities=16% Similarity=0.115 Sum_probs=104.1
Q ss_pred HHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhh
Q 018408 112 SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGI 191 (356)
Q Consensus 112 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~ 191 (356)
.+.+++|+ +..+++.+...-+....+...+.|.++||+|||+..++.+++.+++++. -..+++..++++|++.|++.
T Consensus 59 ~LY~~yg~--~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~-k~~~~~~~L~~GRvlgGiaT 135 (354)
T PF05631_consen 59 ALYESYGF--SEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT-KHSSNYPVLLLGRVLGGIAT 135 (354)
T ss_pred HHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-HhccccHHHHHHHHHHHHHH
Confidence 34467888 5556788888888888889999999999999999999999998888864 35588999999999999999
Q ss_pred hhhhhHHHHHH-Hhhc----CCCccchhHHHhH-HHHHHHHHHHHHhhhccCCCCc-hhHHHHHHhHHHHHHHHHHhh-c
Q 018408 192 GVNTVLVPIYI-SEVA----PTKYRGSLGTLCQ-VGTCLGIITSLFLGIPAEDDPH-WWRTMLYIASLPGFILALGMQ-F 263 (356)
Q Consensus 192 g~~~~~~~~~~-~e~~----p~~~r~~~~~~~~-~~~~~g~~~~~~i~~~l~~~~~-~w~~~~~~~~~~~~~~~~~~~-~ 263 (356)
...+..-.+++ .|.- |.+..+...+... ....+-.+++.+++..+.+..+ +-.++|..++.+.+++.+++. .
T Consensus 136 SLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~ 215 (354)
T PF05631_consen 136 SLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKT 215 (354)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhc
Confidence 99888776654 3432 2222222222222 2233444555555555555443 136677777766666655443 3
Q ss_pred ccCC
Q 018408 264 TVES 267 (356)
Q Consensus 264 ~~e~ 267 (356)
.+|.
T Consensus 216 W~EN 219 (354)
T PF05631_consen 216 WPEN 219 (354)
T ss_pred cccc
Confidence 4554
No 193
>PRK10133 L-fucose transporter; Provisional
Probab=99.07 E-value=6.6e-09 Score=96.97 Aligned_cols=139 Identities=12% Similarity=-0.039 Sum_probs=106.1
Q ss_pred HHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhh
Q 018408 114 AKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGV 193 (356)
Q Consensus 114 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~ 193 (356)
++.+|+ ++.+.++....+.+++.+|.+++|++.||+|+|+++..+.++.+++.++..+.++.. .++..++.|++.+.
T Consensus 287 ~~~~g~--s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~ 363 (438)
T PRK10133 287 EEIPGM--TAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSI 363 (438)
T ss_pred hhcCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHH
Confidence 345687 677789999999999999999999999999999999888877777766665555532 24567789999999
Q ss_pred hhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHH
Q 018408 194 NTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFIL 257 (356)
Q Consensus 194 ~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~ 257 (356)
.+|.......+.+|++ .+.+.++..+ ..+|+.++|.+.+.+.+..|+-+..|++..+..+..
T Consensus 364 i~P~~~s~a~~~~~~~-~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~ 425 (438)
T PRK10133 364 QYPTIFSLGIKNLGQD-TKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVI 425 (438)
T ss_pred HHHHHHHHHHcccchh-hccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 9999999999988754 5677777754 446788888888888776543566666544444433
No 194
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.07 E-value=3.7e-09 Score=100.39 Aligned_cols=128 Identities=14% Similarity=0.055 Sum_probs=107.3
Q ss_pred hHH-HHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHh---hhHHHHHHHH
Q 018408 109 PIV-SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA---HSLDEMLWGR 184 (356)
Q Consensus 109 ~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~ 184 (356)
..| +++..+|+ +..+.+.....+.++..++.++.|++.||+|+|+.+..+.++.+++.++.... ++.+..++..
T Consensus 281 ~~~~~lq~v~g~--s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 358 (495)
T PRK14995 281 LMAQELQFVHGL--SPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLM 358 (495)
T ss_pred HHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHH
Confidence 344 44555788 67779999999999999999999999999999999988888887777655432 3555566678
Q ss_pred HHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCC
Q 018408 185 FLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED 238 (356)
Q Consensus 185 ~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 238 (356)
++.|++.|...+.....+.+..|+++++.+.+++++...+|..+|+.+.+.+.+
T Consensus 359 ~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 359 ALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999988888888999999999999999999999999999999887753
No 195
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.05 E-value=8.9e-09 Score=94.81 Aligned_cols=142 Identities=15% Similarity=0.035 Sum_probs=107.1
Q ss_pred HHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 018408 111 VSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLG 190 (356)
Q Consensus 111 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~ 190 (356)
+++.+.+|. ++.+.|++.+...+|..+++++.+++.||.++++.+..+. +.++..+...+.++++..++..++.|++
T Consensus 230 ~~~~~~lg~--s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 306 (393)
T PRK11195 230 AWAPVALGI--TLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQHSLLPAYPLLILIGAL 306 (393)
T ss_pred HHHHHHcCC--ChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 345566787 5666999999999999999999999999999998887775 3444444555666777677778889999
Q ss_pred hhhhhhHHHHHHHhhcCCCc-cchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHH
Q 018408 191 IGVNTVLVPIYISEVAPTKY-RGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFIL 257 (356)
Q Consensus 191 ~g~~~~~~~~~~~e~~p~~~-r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~ 257 (356)
.+...+...+.+.+..|++. +|++.++.++...+|..++..+.+.+ +..+ -+..+++.++..++.
T Consensus 307 ~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~ 372 (393)
T PRK11195 307 GGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLG-VPVVAVIVGFGLLVA 372 (393)
T ss_pred hhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcC-CCHHHHHHHHHHHHH
Confidence 88888878888888766654 79999999999999999999888855 3444 445455443333333
No 196
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.05 E-value=1.6e-10 Score=103.22 Aligned_cols=180 Identities=14% Similarity=-0.024 Sum_probs=129.4
Q ss_pred HHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHH------HHHHH-HHHHHHHHHHHhHHhhhhhhchhHHHHHh
Q 018408 88 HVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILE------GLVVS-IFIAGAFVGSISSGSLADKLGCRRTFQID 160 (356)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~-~~~~~~~~~~~~~g~l~dr~Grr~~~~~~ 160 (356)
.++..+..+|+.-...+..+.....+.+..|+..+.... ..... +...+++.|..+...++|++|||++.+.+
T Consensus 305 ~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~G 384 (538)
T KOG0252|consen 305 HLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMG 384 (538)
T ss_pred HHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhh
Confidence 355566667777666666677777788877764332211 11111 22333445777788899999999999999
Q ss_pred HHHHHHHHHHHHHhhh----HHHHHHHHHHHHhh-hhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhc
Q 018408 161 TIPLILGAIISAQAHS----LDEMLWGRFLVGLG-IGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIP 235 (356)
Q Consensus 161 ~~~~~i~~~~~~~~~~----~~~~~~~~~l~G~~-~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 235 (356)
.+++.+..+..+...| -..+++...+..++ .-+.......+.+|.||.+.|+++.|+..++.-+|++++......
T Consensus 385 F~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~ 464 (538)
T KOG0252|consen 385 FFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLY 464 (538)
T ss_pred HHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhH
Confidence 9999999998887655 11222222222221 222344455577999999999999999999999999999998888
Q ss_pred cCC-----CCchhHHHHHHhHHHHHHHHHHhhcccCCh
Q 018408 236 AED-----DPHWWRTMLYIASLPGFILALGMQFTVESP 268 (356)
Q Consensus 236 l~~-----~~~~w~~~~~~~~~~~~~~~~~~~~~~e~p 268 (356)
+.+ ..+ .+.++++.+...++..+..+++||+.
T Consensus 465 ~t~~~yp~~~g-~~~v~~i~~~~~~~gi~~T~l~pEtk 501 (538)
T KOG0252|consen 465 LTDHNYPPNIG-VRNVFIILAGCMLLGILFTLLIPETK 501 (538)
T ss_pred hhhccCCcccc-chHHHHHHHHHHHHhHheeEEeeccc
Confidence 887 455 89999999999999999999999983
No 197
>PRK09669 putative symporter YagG; Provisional
Probab=99.04 E-value=1.2e-08 Score=95.50 Aligned_cols=114 Identities=13% Similarity=0.039 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHH--hhhHHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 018408 126 EGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQ--AHSLDEMLWGRFLVGLGIGVNTVLVPIYIS 203 (356)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~ 203 (356)
.+.+.....+..+++.+++++++||+|+|+.+.++.++.++..+...+ .++.+.+++..++.|++.+...+...++++
T Consensus 266 ~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~a 345 (444)
T PRK09669 266 ATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFS 345 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555666777888999999999999999998887766654443332 246666777788999999999999999999
Q ss_pred hhcCC-------CccchhHHHhHHHHHHHHHHHHHhhhccCCC
Q 018408 204 EVAPT-------KYRGSLGTLCQVGTCLGIITSLFLGIPAEDD 239 (356)
Q Consensus 204 e~~p~-------~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 239 (356)
|..+. +..|...++.+....+|..+++.+++.+.+.
T Consensus 346 d~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~ 388 (444)
T PRK09669 346 DVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAW 388 (444)
T ss_pred hhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98862 3345677888888888888888887766543
No 198
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.03 E-value=3.4e-08 Score=90.33 Aligned_cols=121 Identities=14% Similarity=0.118 Sum_probs=85.7
Q ss_pred HHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHH---Hh-hhHHHHHHHHHHH
Q 018408 112 SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISA---QA-HSLDEMLWGRFLV 187 (356)
Q Consensus 112 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~---~~-~~~~~~~~~~~l~ 187 (356)
.+.+.+|. +..+.+++.+...++..++.++.|++.||+|||+.+.++..+..+..+... .. .+.+.++++..+.
T Consensus 220 ~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (377)
T PRK11102 220 VYIELNGV--SPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAF 297 (377)
T ss_pred HHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 45566788 566789999999999999999999999999999999888766544433322 12 2344444444455
Q ss_pred HhhhhhhhhHHHHHHHhhcCCCccchhHHHhHH-HHHHHHHHHHHhhhc
Q 018408 188 GLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQV-GTCLGIITSLFLGIP 235 (356)
Q Consensus 188 G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~-~~~~g~~~~~~i~~~ 235 (356)
+.+.+........++.|..| +.++.+.++.+. ...+|..+++++++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 298 VGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSLA 345 (377)
T ss_pred HHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 55555555666667778776 789999998654 456778888877654
No 199
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.01 E-value=5.5e-09 Score=94.54 Aligned_cols=143 Identities=16% Similarity=0.060 Sum_probs=120.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 018408 123 PILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYI 202 (356)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~ 202 (356)
+...|.+.+...+.-++...+..++.+|+|.|+.++++.+++++=.++++++++.+.+.+.+.+.|+-.+.......-|+
T Consensus 258 ~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI 337 (412)
T PF01306_consen 258 NQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYI 337 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34578888888888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCccchhHHH-hHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHh-hcccC
Q 018408 203 SEVAPTKYRGSLGTL-CQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGM-QFTVE 266 (356)
Q Consensus 203 ~e~~p~~~r~~~~~~-~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e 266 (356)
++.+|++..++...+ .+....+|..+.+.++|.+.|+.| .+..|++.+.+.++..++. +.+++
T Consensus 338 ~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G-~~~tylimg~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 338 TAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIG-FQHTYLIMGLIVLPFTLISAFTLKK 402 (412)
T ss_dssp HHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred HHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcC-cHHHHHHHHHHHHHHHHHheeeecC
Confidence 999999988888887 479999999999999999999988 8888887766666555444 44443
No 200
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.01 E-value=1.8e-08 Score=93.28 Aligned_cols=143 Identities=12% Similarity=-0.140 Sum_probs=103.2
Q ss_pred hhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 018408 107 NGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFL 186 (356)
Q Consensus 107 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 186 (356)
...++.+.++.+.+.+....+...+.+..+..+|.++++++.||+++|+++.+..++.++..++....++... +++-++
T Consensus 252 ~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~ 330 (410)
T TIGR00885 252 WTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTL 330 (410)
T ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHH
Confidence 3445555555443334433455666677788999999999999999999999988888888888877766544 456677
Q ss_pred HHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCC-----chhHHHHHHhHH
Q 018408 187 VGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP-----HWWRTMLYIASL 252 (356)
Q Consensus 187 ~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~-----~~w~~~~~~~~~ 252 (356)
.|++.+..+|.......+..+++.+....++.. + .+|+++.|.+.|.+.|+. ++.+..|++..+
T Consensus 331 ~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~-~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~ 399 (410)
T TIGR00885 331 CSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVM-A-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLL 399 (410)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHH-H-HhccchHHHHHHHHHHHhcccccCccchHHHHHHH
Confidence 888888888999999999998665433333333 2 399999999999999853 236666665433
No 201
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.01 E-value=4.1e-08 Score=85.74 Aligned_cols=157 Identities=17% Similarity=0.168 Sum_probs=125.9
Q ss_pred hhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhh-chhHHHHHhHHHHHHHHHHHHHhhhHHH
Q 018408 101 YHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL-GCRRTFQIDTIPLILGAIISAQAHSLDE 179 (356)
Q Consensus 101 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~i~~~~~~~~~~~~~ 179 (356)
+..+....++|.+..|.|+ +..+.|++.+...+......+....+++|. .+|+..+....++.++.+.+.+.+....
T Consensus 222 ~~~Y~~~~WLP~ili~~G~--sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~ 299 (395)
T COG2807 222 LLYYIVIGWLPAILIDRGL--SAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLP 299 (395)
T ss_pred HHHHHHHHHHHHHHHHcCC--CHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 3444556778999999999 677799999999999999999999999965 6777777788888888887777765444
Q ss_pred HHHHHHHHHhhhhhhhhHHHHHHHhhcCC-CccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHH
Q 018408 180 MLWGRFLVGLGIGVNTVLVPIYISEVAPT-KYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILA 258 (356)
Q Consensus 180 ~~~~~~l~G~~~g~~~~~~~~~~~e~~p~-~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~ 258 (356)
+.. .+++|++.|+.++....++..-.+. ++-+...++.+....+=..++|.+.|++-|..|+|+..++..+...++..
T Consensus 300 ~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~ 378 (395)
T COG2807 300 ILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLML 378 (395)
T ss_pred HHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHH
Confidence 333 4899999999999999999887765 44566667788888888889999999999999999988887766666554
Q ss_pred HH
Q 018408 259 LG 260 (356)
Q Consensus 259 ~~ 260 (356)
+.
T Consensus 379 i~ 380 (395)
T COG2807 379 IF 380 (395)
T ss_pred HH
Confidence 43
No 202
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.00 E-value=1.1e-08 Score=94.28 Aligned_cols=119 Identities=15% Similarity=0.180 Sum_probs=78.3
Q ss_pred HHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhh
Q 018408 112 SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGI 191 (356)
Q Consensus 112 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~ 191 (356)
.+.+++|. +..+.+.+.+...++..++.++.+++.||+|||+.+.++..+..++.++..+.++....++...+.+.+.
T Consensus 229 ~~~~~~g~--~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 306 (392)
T PRK10473 229 LLMEQMGF--SRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGF 306 (392)
T ss_pred HHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567788 5556788888889999999999999999999999999999888888887777665554444444444444
Q ss_pred hhhhhHHHHHHHhhcCCCcc-chhHHHhHHHHHHHHHHHHHhhh
Q 018408 192 GVNTVLVPIYISEVAPTKYR-GSLGTLCQVGTCLGIITSLFLGI 234 (356)
Q Consensus 192 g~~~~~~~~~~~e~~p~~~r-~~~~~~~~~~~~~g~~~~~~i~~ 234 (356)
+...+.. ...+..|.++| |.+.++..++..+|..+++.+.+
T Consensus 307 ~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~l~~ 348 (392)
T PRK10473 307 SVGFGVA--MSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAA 348 (392)
T ss_pred HHHhHHH--HHHHhccCcccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433332 33455565444 33444444444445444444443
No 203
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.99 E-value=2.4e-12 Score=120.68 Aligned_cols=158 Identities=20% Similarity=0.088 Sum_probs=102.2
Q ss_pred chhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHH--H---hhh----
Q 018408 106 MNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISA--Q---AHS---- 176 (356)
Q Consensus 106 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~--~---~~~---- 176 (356)
.....+.+.+..+.+.. -.......+...++.+++.++.||+|||+.++++.++.+++.+..+ . .++
T Consensus 272 ~~~~~~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (451)
T PF00083_consen 272 IFYYSPSIFENAGISNS----FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWW 347 (451)
T ss_pred ccccccccccccccccc----ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 33445667777777433 1222333444556777777999999999999999888888877664 1 112
Q ss_pred HHHHHHHHHHHHhhhh-hhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHH
Q 018408 177 LDEMLWGRFLVGLGIG-VNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGF 255 (356)
Q Consensus 177 ~~~~~~~~~l~G~~~g-~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~ 255 (356)
-...++.-.+..++.+ +..+..+.+.+|.+|++.|+++.++......+++++++.+...+.+..+.+.....+.++..+
T Consensus 348 ~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i 427 (451)
T PF00083_consen 348 SILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLI 427 (451)
T ss_pred ccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHH
Confidence 1111222222222222 344666688899999999999999998888899999988887777665423333333344444
Q ss_pred HHHHHhhcccCC
Q 018408 256 ILALGMQFTVES 267 (356)
Q Consensus 256 ~~~~~~~~~~e~ 267 (356)
..++.++++|||
T Consensus 428 ~~i~~~~~lpET 439 (451)
T PF00083_consen 428 AIIFVYFFLPET 439 (451)
T ss_pred HHhheeEEEeeC
Confidence 445667889999
No 204
>PRK11043 putative transporter; Provisional
Probab=98.98 E-value=1.2e-07 Score=87.48 Aligned_cols=130 Identities=15% Similarity=0.066 Sum_probs=96.6
Q ss_pred hhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHH---H--hhhHHHHHH
Q 018408 108 GPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISA---Q--AHSLDEMLW 182 (356)
Q Consensus 108 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~---~--~~~~~~~~~ 182 (356)
...|.+.+++|+ +..+.++......++..++.++.+++.||+|+|+.+....++.+++.+... . .++...+++
T Consensus 224 ~~~p~~~~~~g~--s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (401)
T PRK11043 224 TGSPFILEQMGY--SPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLI 301 (401)
T ss_pred HHhHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHH
Confidence 345666677888 566678877777888899999999999999999877665555444433322 2 234555556
Q ss_pred HHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCC
Q 018408 183 GRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP 240 (356)
Q Consensus 183 ~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 240 (356)
...+.|++.+..++.......+..| ++||+++++++.....++.+++.+.+.+.+..
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 358 (401)
T PRK11043 302 PFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTP 358 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 6677888888888888877777776 57999999999888888888888888887644
No 205
>PRK11462 putative transporter; Provisional
Probab=98.94 E-value=5.6e-08 Score=91.34 Aligned_cols=147 Identities=16% Similarity=0.091 Sum_probs=103.9
Q ss_pred HHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhh----hchhHHHHH-hHHHHHHHHHHHHHhhh------HHH
Q 018408 111 VSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK----LGCRRTFQI-DTIPLILGAIISAQAHS------LDE 179 (356)
Q Consensus 111 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr~~~~~-~~~~~~i~~~~~~~~~~------~~~ 179 (356)
.++.+..|+ ++...|.+..+.-+.-++.-++.|.++|| +||||.+++ +.+..+++.+++...+. ...
T Consensus 34 ~fyt~~~Gl--~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y 111 (460)
T PRK11462 34 FFYTDIFGI--PAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIY 111 (460)
T ss_pred HHHHHhhCC--CHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 455667788 67778888888888888999999999996 698876654 66777777666554442 233
Q ss_pred HHHHHHHHHhhhhhhhhHHHHHHHhhcC-CCccchhHHHhHHHHHHHHHHHHHhhhccCCCC------chhHHHHHHhHH
Q 018408 180 MLWGRFLVGLGIGVNTVLVPIYISEVAP-TKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP------HWWRTMLYIASL 252 (356)
Q Consensus 180 ~~~~~~l~G~~~g~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~------~~w~~~~~~~~~ 252 (356)
+++.-++..++.........++.+|+.+ +++|.+..++...+..+|..+++.+...+.... .+|+....+.++
T Consensus 112 ~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~i 191 (460)
T PRK11462 112 AAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSV 191 (460)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 4445566788888888888899999997 688999999988888888777766543322211 126666666555
Q ss_pred HHHHHHH
Q 018408 253 PGFILAL 259 (356)
Q Consensus 253 ~~~~~~~ 259 (356)
+.+++.+
T Consensus 192 i~~i~~~ 198 (460)
T PRK11462 192 VAFMMLA 198 (460)
T ss_pred HHHHHHH
Confidence 5544443
No 206
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.93 E-value=9.6e-08 Score=91.12 Aligned_cols=175 Identities=14% Similarity=0.056 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHH
Q 018408 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (356)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 168 (356)
...+.+..+....+......+.+.+.+..|.+.+. .+...+..+...++..+...+.||+|||+.++.+...+.++.
T Consensus 297 ~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~---~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~ 373 (513)
T KOG0254|consen 297 IIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT---FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICL 373 (513)
T ss_pred HHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch---HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHH
Confidence 33445555555566666667778888888885332 344555556667777888999999999999999999999999
Q ss_pred HHHHHhhhH-------------HHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhc
Q 018408 169 IISAQAHSL-------------DEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIP 235 (356)
Q Consensus 169 ~~~~~~~~~-------------~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 235 (356)
++++..... ..+...-+.......+..++.+.+.+|.+|.+.|+++.++......+...+-......
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~ 453 (513)
T KOG0254|consen 374 VILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPF 453 (513)
T ss_pred HHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 887754211 1222222333333334456677889999999999999999766555555444433333
Q ss_pred cCCCCchhHHHHHH-hHHHHHHHH-HHhhcccCC
Q 018408 236 AEDDPHWWRTMLYI-ASLPGFILA-LGMQFTVES 267 (356)
Q Consensus 236 l~~~~~~w~~~~~~-~~~~~~~~~-~~~~~~~e~ 267 (356)
.....+ +...|.+ .++..+... ...+++||+
T Consensus 454 ~~~~~~-~~~~f~~f~~~~~~~~~~fv~~~~pET 486 (513)
T KOG0254|consen 454 ITEALG-IGGTFGYFGGICLLSLIIFVFFFVPET 486 (513)
T ss_pred HHHhcc-ccchHHHHHHHHHHHHHHHheEEcccC
Confidence 333222 2233443 333333334 467779998
No 207
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.91 E-value=9.1e-08 Score=84.01 Aligned_cols=154 Identities=27% Similarity=0.429 Sum_probs=117.9
Q ss_pred hhhhcchhhHHHHHHHhCCCCCh-hHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhh--H
Q 018408 101 YHIGVMNGPIVSIAKELGFEGNP-ILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHS--L 177 (356)
Q Consensus 101 ~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~--~ 177 (356)
+.........+.+..+++.+. . ...++..+.+.++..++.++.|.++||+|||+.+..+.....++.+..++..+ .
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (338)
T COG0477 16 LDLGLLSPALPLLLSTLSLSS-GRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGL 94 (338)
T ss_pred HhcchHHHHHHHHHHHcCCCc-hhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchH
Confidence 444555556667777766521 1 34788899999999999999999999999998888887765666666666665 8
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHhhcCC-CccchhHHHhHH-HHHHHHHHHHHhhhccCCC--CchhHHHHHHhHHH
Q 018408 178 DEMLWGRFLVGLGIGVNTVLVPIYISEVAPT-KYRGSLGTLCQV-GTCLGIITSLFLGIPAEDD--PHWWRTMLYIASLP 253 (356)
Q Consensus 178 ~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~-~~r~~~~~~~~~-~~~~g~~~~~~i~~~l~~~--~~~w~~~~~~~~~~ 253 (356)
..+++.|++.|++.+...+....++.|++|. +.|+...+.... ...+|..+++.+++.+... .+ |++.+.+....
T Consensus 95 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 173 (338)
T COG0477 95 ALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWG-WRAAFLLAALL 173 (338)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hHHHHHHHHHH
Confidence 8888999999999999999999999999998 678888888777 5777888888776655543 34 88866665555
Q ss_pred HHH
Q 018408 254 GFI 256 (356)
Q Consensus 254 ~~~ 256 (356)
...
T Consensus 174 ~~~ 176 (338)
T COG0477 174 GLL 176 (338)
T ss_pred HHH
Confidence 433
No 208
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.91 E-value=4.9e-07 Score=84.71 Aligned_cols=146 Identities=18% Similarity=0.114 Sum_probs=102.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHh-HHHHHHHHHHHHHh-h-hHHHHHHHHHHHHhhhhhhhhHHHH
Q 018408 124 ILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQID-TIPLILGAIISAQA-H-SLDEMLWGRFLVGLGIGVNTVLVPI 200 (356)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~-~~~~~i~~~~~~~~-~-~~~~~~~~~~l~G~~~g~~~~~~~~ 200 (356)
+..++..++..+..++..++.|.++|+-|+||.++.. ..+..+++.++.+. + +++...+..++..++.+.......+
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456777888888889999999999999888776664 44555556666554 3 4544555566666788888888999
Q ss_pred HHHhhcCCCcc--------------------------chhHHHhHHHHHHHHHHHHHhhhccCCCCc-------hhHHHH
Q 018408 201 YISEVAPTKYR--------------------------GSLGTLCQVGTCLGIITSLFLGIPAEDDPH-------WWRTML 247 (356)
Q Consensus 201 ~~~e~~p~~~r--------------------------~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~-------~w~~~~ 247 (356)
++.|+.+++.+ ++..+.-.....+|+++.-.+.-.+....+ +.|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 99999999888 888888777788888777766444322111 147777
Q ss_pred HHhHHHHHHH-HHHhhcccCChH
Q 018408 248 YIASLPGFIL-ALGMQFTVESPR 269 (356)
Q Consensus 248 ~~~~~~~~~~-~~~~~~~~e~p~ 269 (356)
.+.++.-++. +...+++|+.|+
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCC
Confidence 7766665444 445666787753
No 209
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.89 E-value=9.8e-09 Score=93.70 Aligned_cols=165 Identities=18% Similarity=0.089 Sum_probs=135.5
Q ss_pred HHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhh
Q 018408 96 NFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH 175 (356)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~ 175 (356)
.++.|...+.....+=+-.++.|- .+...|........|-++.-++.+++..|+|+-+++.+++.+.++=.+...+..
T Consensus 380 av~mG~g~~lv~tFLfWHled~~~--~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~ 457 (618)
T KOG3762|consen 380 AVVMGAGVGLVFTFLFWHLEDLGG--IKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQ 457 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCC--cceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhc
Confidence 334444444444444445677764 455577777777788888899999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHh-HHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHH
Q 018408 176 SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLC-QVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPG 254 (356)
Q Consensus 176 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~-~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~ 254 (356)
|.|..+..-+++|+..+..+....+|++...|++.|+++.++. .....+|-.+|.+|++.+....+ -+..|.+.++.+
T Consensus 458 n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg-~~ttf~~~giAc 536 (618)
T KOG3762|consen 458 NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFG-ARTTFRIFGIAC 536 (618)
T ss_pred CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeeh-hHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999986 46778888999999999998887 788888877777
Q ss_pred HHHHHHhhc
Q 018408 255 FILALGMQF 263 (356)
Q Consensus 255 ~~~~~~~~~ 263 (356)
++.++....
T Consensus 537 l~~l~~~~~ 545 (618)
T KOG3762|consen 537 LVTLALFIS 545 (618)
T ss_pred HHHHHHHHH
Confidence 766554433
No 210
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.86 E-value=6.1e-08 Score=88.83 Aligned_cols=141 Identities=18% Similarity=0.177 Sum_probs=101.5
Q ss_pred HHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhh
Q 018408 96 NFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH 175 (356)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~ 175 (356)
.++........+....++.+ +.++.++....+.......+.+++.++..++.+|+|+|+++.++.++.+++.++..+.+
T Consensus 245 ~l~~~~~~~i~~s~~~yy~~-y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~ 323 (467)
T COG2211 245 NLLLFIAFNIRGSIMVYYVT-YVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTP 323 (467)
T ss_pred HHHHHHHHHHHhhhhheeEE-EEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhc
Confidence 33333333334444444333 34444666666777777777788899999999999999999999999999999888876
Q ss_pred --hHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCC-----Ccc--chhHHHhHHHHHHHHHHHHHhhhccC
Q 018408 176 --SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPT-----KYR--GSLGTLCQVGTCLGIITSLFLGIPAE 237 (356)
Q Consensus 176 --~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~-----~~r--~~~~~~~~~~~~~g~~~~~~i~~~l~ 237 (356)
+...+++..++.+++.+...+..+++++|...- ..| |...+...+..=+|.+++..+.++..
T Consensus 324 ~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L 394 (467)
T COG2211 324 AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWIL 394 (467)
T ss_pred CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677788888999999999999999999887642 223 55666666666667666665555433
No 211
>PRK09848 glucuronide transporter; Provisional
Probab=98.85 E-value=1.9e-07 Score=87.68 Aligned_cols=124 Identities=15% Similarity=0.196 Sum_probs=83.1
Q ss_pred HHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhh----chhHHH-HHhHHHHHHHHHHHHHhh-----h--HH
Q 018408 111 VSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL----GCRRTF-QIDTIPLILGAIISAQAH-----S--LD 178 (356)
Q Consensus 111 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----Grr~~~-~~~~~~~~i~~~~~~~~~-----~--~~ 178 (356)
.++.+.+|+ +..+.|.+.+...+..++..++.|+++||. |||+.+ .++.+...+..++....+ + ..
T Consensus 33 ~y~~~~~gl--~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (448)
T PRK09848 33 SYYTDVAGV--GAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVV 110 (448)
T ss_pred HHHHHHcCC--CHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHH
Confidence 466777788 677899999999999999999999999996 777755 445554444444332111 1 22
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHhhcCC-CccchhHHHhHHH-----HHHHHHHHHHhhhcc
Q 018408 179 EMLWGRFLVGLGIGVNTVLVPIYISEVAPT-KYRGSLGTLCQVG-----TCLGIITSLFLGIPA 236 (356)
Q Consensus 179 ~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~-~~r~~~~~~~~~~-----~~~g~~~~~~i~~~l 236 (356)
.+++..++.+++.+...+...++..++... ++|.+..++-..+ ..++..++|.+.+..
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~ 174 (448)
T PRK09848 111 YAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSS 174 (448)
T ss_pred HHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 233445667777877777777777777754 6688776654433 335566667666543
No 212
>PRK11462 putative transporter; Provisional
Probab=98.84 E-value=1.5e-07 Score=88.40 Aligned_cols=112 Identities=15% Similarity=-0.018 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhh--hHHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 018408 126 EGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAH--SLDEMLWGRFLVGLGIGVNTVLVPIYIS 203 (356)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~l~G~~~g~~~~~~~~~~~ 203 (356)
.+.+...+.++.+++.+++++++||+|+|+.+..+..+.++..++..+.+ +...+++.-++.|++.+...+....+++
T Consensus 265 ~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~a 344 (460)
T PRK11462 265 FVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMS 344 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667778888899999999999999999987765554444343333332 2223444556678877777777777777
Q ss_pred hhcCC-----Ccc--chhHHHhHHHHHHHHHHHHHhhhccC
Q 018408 204 EVAPT-----KYR--GSLGTLCQVGTCLGIITSLFLGIPAE 237 (356)
Q Consensus 204 e~~p~-----~~r--~~~~~~~~~~~~~g~~~~~~i~~~l~ 237 (356)
|..+. .+| |...+......-+|..+++.+++.+.
T Consensus 345 d~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL 385 (460)
T PRK11462 345 DTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWML 385 (460)
T ss_pred HhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77652 234 44445555666666666666555443
No 213
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.84 E-value=3e-07 Score=84.71 Aligned_cols=126 Identities=17% Similarity=0.091 Sum_probs=91.6
Q ss_pred HHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHH-HHHHHHHHHH--hhhHHHHHHHHHHHH
Q 018408 112 SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP-LILGAIISAQ--AHSLDEMLWGRFLVG 188 (356)
Q Consensus 112 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~-~~i~~~~~~~--~~~~~~~~~~~~l~G 188 (356)
.+.+.+|. +..+.+++.....++..++.++.+++.||+|++......... ..+....... ..+.+.++++.++.|
T Consensus 233 ~~~~~~g~--~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (394)
T PRK11652 233 LMGAVLGL--SSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFF 310 (394)
T ss_pred HHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 34445787 566688888888888889999999999999844333222222 2222122222 234566677788899
Q ss_pred hhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCC
Q 018408 189 LGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP 240 (356)
Q Consensus 189 ~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 240 (356)
++.+...+....+..|.+| +++|...++.+....+|..+++.+++.+....
T Consensus 311 ~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~ 361 (394)
T PRK11652 311 FGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQTG 361 (394)
T ss_pred HHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 9999999999999999887 57899999999999999999999998876553
No 214
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.83 E-value=2.8e-07 Score=86.94 Aligned_cols=135 Identities=14% Similarity=0.050 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhhhch-----hHHH--HHhHHHHHHHHHHHHH---------hhhHHHHHHHHHHHHh
Q 018408 126 EGLVVSIFIAGAFVGSISSGSLADKLGC-----RRTF--QIDTIPLILGAIISAQ---------AHSLDEMLWGRFLVGL 189 (356)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-----r~~~--~~~~~~~~i~~~~~~~---------~~~~~~~~~~~~l~G~ 189 (356)
.+++.++..+.-++.+++..++..+.+| +... .+|.++.+++.+..++ ..|++.+++..++.++
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 5677777776667776665543334433 3333 6788888888777664 3588889999999999
Q ss_pred hhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHh
Q 018408 190 GIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGM 261 (356)
Q Consensus 190 ~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~ 261 (356)
+.....+....++.+..|++.||+++|++.....+|..+++.+.....+..+ |.+.|...++..++..++.
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 464 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQG-VTGVFGKIGLVTLLVGVVM 464 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-hhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998887766655 7777777666655554443
No 215
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.83 E-value=8.5e-08 Score=89.30 Aligned_cols=171 Identities=15% Similarity=0.073 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHHHHhhhhcchhhHHHHH-HHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhch---------hHH
Q 018408 87 PHVLIASMSNFLFGYHIGVMNGPIVSIA-KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGC---------RRT 156 (356)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr---------r~~ 156 (356)
..++.+.++.+...+....+...+|.+. +-+|+ +-.+.|++.++..+.+.+..+++|.++||.-+ |..
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f--~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkif 335 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGF--DVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIF 335 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCC--ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHH
Confidence 3467777778888887777777777555 45788 44559999999999999999999999998744 333
Q ss_pred HHHhHHHHHHHHHHHHHhhh--H-HHH---HHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHH
Q 018408 157 FQIDTIPLILGAIISAQAHS--L-DEM---LWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSL 230 (356)
Q Consensus 157 ~~~~~~~~~i~~~~~~~~~~--~-~~~---~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~ 230 (356)
-.++....+++.+..++.++ . ..+ .+...+.|+..++. +.-..+. .+++-+..+|+.+....+.++++|
T Consensus 336 n~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf----~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P 410 (466)
T KOG2532|consen 336 NTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGF----YKNHQDI-APQHAGFVMGIINFVGALAGFIAP 410 (466)
T ss_pred HhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhh----Hhhhhhc-cchHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566666666666552 1 111 11222233333322 2222222 457789999999999999999999
Q ss_pred HhhhccCCCC--chhHHHHHHhHHHHHHHHHHhhcc
Q 018408 231 FLGIPAEDDP--HWWRTMLYIASLPGFILALGMQFT 264 (356)
Q Consensus 231 ~i~~~l~~~~--~~w~~~~~~~~~~~~~~~~~~~~~ 264 (356)
.+.+.+.... ..|+++|++.+++.++..+.+.++
T Consensus 411 ~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 411 LLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 9999998522 249999999988888776554443
No 216
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.76 E-value=4e-08 Score=89.40 Aligned_cols=111 Identities=15% Similarity=0.171 Sum_probs=82.5
Q ss_pred HHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHh--h--hHHHHHHHHHHH
Q 018408 112 SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA--H--SLDEMLWGRFLV 187 (356)
Q Consensus 112 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~--~--~~~~~~~~~~l~ 187 (356)
++.+.+|. +..+.+++.+...++..++.+++|+++||+|||+.+..+..+..++..+..+. . +...+++...+.
T Consensus 251 ~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (366)
T TIGR00886 251 FFKDQFGL--SKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVAL 328 (366)
T ss_pred HHHHHcCC--cHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHH
Confidence 44566787 55668888888888999999999999999999988877776666665555432 2 455555555566
Q ss_pred HhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHH
Q 018408 188 GLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLG 225 (356)
Q Consensus 188 G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g 225 (356)
+++.|...+....++++.+| +++|..+|+.+....+|
T Consensus 329 ~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 329 FFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 66666666667778888887 68999999988776654
No 217
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.76 E-value=6.9e-07 Score=84.85 Aligned_cols=133 Identities=11% Similarity=0.073 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHHHHHhH----HhhhhhhchhHHHHHhHHHHHHHHHHHHHhhh---------HHHHHHHHHHHHhhhh
Q 018408 126 EGLVVSIFIAGAFVGSISS----GSLADKLGCRRTFQIDTIPLILGAIISAQAHS---------LDEMLWGRFLVGLGIG 192 (356)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~----g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~---------~~~~~~~~~l~G~~~g 192 (356)
.+++.++..+...+..++. +++.+|++..+.+.+++++.+++.++.+...+ .+.+++..++.|++..
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 4555665555555555555 66666666778888999999999888776654 4578888999999999
Q ss_pred hhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccC-----CC----CchhHHHHHHhHHHHHHHH
Q 018408 193 VNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAE-----DD----PHWWRTMLYIASLPGFILA 258 (356)
Q Consensus 193 ~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~-----~~----~~~w~~~~~~~~~~~~~~~ 258 (356)
...|....++.+..|++.||+.+|++.+...+|..++..+..... .. .++..+.|...++..++..
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a 472 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIA 472 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998888888888877764221 10 1125667776666555443
No 218
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.73 E-value=3.2e-08 Score=87.24 Aligned_cols=170 Identities=14% Similarity=0.081 Sum_probs=127.1
Q ss_pred HHHHHHHHHHHHhhhhcchhhHHH-HHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhc--hhHHHHHhHHHHH
Q 018408 89 VLIASMSNFLFGYHIGVMNGPIVS-IAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLG--CRRTFQIDTIPLI 165 (356)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G--rr~~~~~~~~~~~ 165 (356)
+..+.......+......-+.++. +.+++.. ...+.|...--..+.+.++..+.|.++||++ |...-..+++..+
T Consensus 272 I~~~agai~~~n~~lafLePtlslwm~e~m~~--p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G 349 (464)
T KOG3764|consen 272 ILLIAGAITFSNSSLAFLEPTLSLWMLETMFT--PGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVG 349 (464)
T ss_pred HhhhhcchhhccchHHHhCcccHHHHHHhccC--CCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHH
Confidence 444444444444555555665554 4555553 3335666666677889999999999999999 6555555777777
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCC------ccchhHHHhHHHHHHHHHHHHHhhhccCCC
Q 018408 166 LGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTK------YRGSLGTLCQVGTCLGIITSLFLGIPAEDD 239 (356)
Q Consensus 166 i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~------~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 239 (356)
+++.+..+++++..+++-++..|++.+...+.....+.+....+ ..|...++...++.+|.++||.+++.+.+.
T Consensus 350 ~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~ 429 (464)
T KOG3764|consen 350 VSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEA 429 (464)
T ss_pred HHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheee
Confidence 77778889999999999999999998888777766666666532 457788889999999999999999999999
Q ss_pred CchhHHHHHHhHHHHHHHHHHh
Q 018408 240 PHWWRTMLYIASLPGFILALGM 261 (356)
Q Consensus 240 ~~~w~~~~~~~~~~~~~~~~~~ 261 (356)
.| ++|.-.+.++..++-..+.
T Consensus 430 iG-F~wl~~iig~~n~iyapvl 450 (464)
T KOG3764|consen 430 IG-FEWLMTIIGILNLIYAPVL 450 (464)
T ss_pred hh-HHHHHHHHHHHHHHHHHHH
Confidence 88 9998888777766655433
No 219
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.71 E-value=1e-07 Score=84.75 Aligned_cols=147 Identities=18% Similarity=0.091 Sum_probs=106.3
Q ss_pred HHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCC-----------
Q 018408 172 AQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP----------- 240 (356)
Q Consensus 172 ~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~----------- 240 (356)
+...++..++++-++.|.|.+...+..+.++++..|++++++.+++.+.++.+|..++|.+++.+....
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 356789999999999999999999999999999999999999999999999999999999999766321
Q ss_pred ----chhHHHHHHhHHHHHHHHHHhhcc--cCChHHHHhcCCHHHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCCCccc
Q 018408 241 ----HWWRTMLYIASLPGFILALGMQFT--VESPRWLCKGGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSDLDSQ 314 (356)
Q Consensus 241 ----~~w~~~~~~~~~~~~~~~~~~~~~--~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (356)
.+|++.|++.+.+.++..+.+.+. ||.+ . ++ .+ +. .+++. ..
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~-----~---~~-------------~~-~~------~~~~~----~~ 132 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQ-----E---AD-------------VA-RV------SSGDT----TQ 132 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCC-----c---cc-------------cc-cc------ccccc----cc
Confidence 248998886655544444444343 4431 0 00 00 00 00000 11
Q ss_pred hhhhcccCcchhhHHHHHHHHHHHHHHHHHHHhhhh
Q 018408 315 WSELLEEPHSRVAFIGDGALASLLVGVTNFAGLRSE 350 (356)
Q Consensus 315 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (356)
.+.++++|.++...++...+.+...++..|...++.
T Consensus 133 ~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~ 168 (310)
T TIGR01272 133 KTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLS 168 (310)
T ss_pred hhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 224567788887777778888889998888888774
No 220
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.69 E-value=6.3e-07 Score=86.92 Aligned_cols=151 Identities=15% Similarity=0.151 Sum_probs=114.2
Q ss_pred HHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhh-hchhHHHHHhHHHHHHHHHHHHHhh--------hHHHH
Q 018408 110 IVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK-LGCRRTFQIDTIPLILGAIISAQAH--------SLDEM 180 (356)
Q Consensus 110 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~i~~~~~~~~~--------~~~~~ 180 (356)
..++.+.+|+ +...+..+...+....-+..+++|+++|+ +||++.+.++.++..++..+.++.. .....
T Consensus 11 vlYl~~~lg~--~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~ 88 (654)
T TIGR00926 11 VLYFLNFLGF--SESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLD 88 (654)
T ss_pred HHHHHHHcCC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHH
Confidence 3456667787 44445556666666667788899999997 5999999999999999988876642 12335
Q ss_pred HHHHHHHHhhhhhhhhHHHHHHHhhcCCCc---cchhHHHhHHHHHHHHHHHHHhhhccCCCC------chhHHHHHHhH
Q 018408 181 LWGRFLVGLGIGVNTVLVPIYISEVAPTKY---RGSLGTLCQVGTCLGIITSLFLGIPAEDDP------HWWRTMLYIAS 251 (356)
Q Consensus 181 ~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~---r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~------~~w~~~~~~~~ 251 (356)
+++..+.++|.|++-+...+...|.++.++ |-.+..++..+.++|+++++.+.+++.+.. .+|...|.+.+
T Consensus 89 l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~ 168 (654)
T TIGR00926 89 LLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPA 168 (654)
T ss_pred HHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHH
Confidence 567788889999999999999999997543 556777788899999999998888776332 13888999888
Q ss_pred HHHHHHHHHhh
Q 018408 252 LPGFILALGMQ 262 (356)
Q Consensus 252 ~~~~~~~~~~~ 262 (356)
+..++++++..
T Consensus 169 i~m~ia~lvf~ 179 (654)
T TIGR00926 169 ILMILALIVFM 179 (654)
T ss_pred HHHHHHHHHHH
Confidence 88777765543
No 221
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.68 E-value=1.3e-07 Score=89.05 Aligned_cols=150 Identities=15% Similarity=0.097 Sum_probs=114.3
Q ss_pred HHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHh----------hhHHHHHHHH
Q 018408 115 KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA----------HSLDEMLWGR 184 (356)
Q Consensus 115 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~~~ 184 (356)
+.+|+ ++.+.|.+.....++.+++..+.+++.+|++.|+++.++.++.+++.+..... ++.+.++...
T Consensus 281 ~~lG~--s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~ 358 (468)
T TIGR00788 281 QCLPG--GPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDS 358 (468)
T ss_pred ccCCC--CcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehh
Confidence 45677 56668999999999999999999999999999999999999988877554311 2333444556
Q ss_pred HHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCc------hhHHHH-HHhHHHHHHH
Q 018408 185 FLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH------WWRTML-YIASLPGFIL 257 (356)
Q Consensus 185 ~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~------~w~~~~-~~~~~~~~~~ 257 (356)
++.+++.+........++.+..|++.+|+..++.+...++|..+++.+++.+.++.| +..+.. .++.+..++.
T Consensus 359 ~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~ 438 (468)
T TIGR00788 359 IIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLP 438 (468)
T ss_pred HHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHH
Confidence 788888888888899999999999999999999999999999999988887766433 122222 2344444545
Q ss_pred HHHhhcccC
Q 018408 258 ALGMQFTVE 266 (356)
Q Consensus 258 ~~~~~~~~e 266 (356)
+....++|+
T Consensus 439 l~~~~llP~ 447 (468)
T TIGR00788 439 LPLLHLLPR 447 (468)
T ss_pred HHHHHhCCC
Confidence 555556785
No 222
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.67 E-value=6.7e-07 Score=80.79 Aligned_cols=158 Identities=15% Similarity=0.123 Sum_probs=115.4
Q ss_pred HHHHHHH-hCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 018408 110 IVSIAKE-LGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVG 188 (356)
Q Consensus 110 ~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G 188 (356)
.|++.+. .|++..+. ..-+.-...-.+....++...+.|.+|.|++++++.+...+...+..+.++...+-+..++.|
T Consensus 27 ~~yL~~~~kn~T~~qv-~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg 105 (412)
T PF01770_consen 27 TPYLTGPDKNFTEEQV-NNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYG 105 (412)
T ss_pred hHHHcCCccCCCHHHH-HHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHH
Confidence 3566554 67742221 122223334456778888999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCC-chhHHHHHHhHHHHHHHHHHhhcccCC
Q 018408 189 LGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP-HWWRTMLYIASLPGFILALGMQFTVES 267 (356)
Q Consensus 189 ~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~e~ 267 (356)
++.+. ....++|+--..|+++--++.+....+..+|-.++..++-.+.... .++....++......++.+..+++|..
T Consensus 106 ~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~ 184 (412)
T PF01770_consen 106 LATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMP 184 (412)
T ss_pred HHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 98866 4666778877788887778888877777777666666665555422 227777777777777777777888876
Q ss_pred hH
Q 018408 268 PR 269 (356)
Q Consensus 268 p~ 269 (356)
++
T Consensus 185 ~~ 186 (412)
T PF01770_consen 185 KR 186 (412)
T ss_pred Cc
Confidence 53
No 223
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.67 E-value=5.7e-07 Score=83.53 Aligned_cols=169 Identities=21% Similarity=0.181 Sum_probs=119.5
Q ss_pred HHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHH----HHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHH
Q 018408 93 SMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSI----FIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (356)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 168 (356)
.+-.+..+..........+.....++.+.... .+..... ..+...+.++..|.++||+|||..+.+..+...+..
T Consensus 28 fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~-~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~ 106 (463)
T KOG2816|consen 28 FLYMFSWGLSSTVMTNVILYLACTFGDDYQLE-NGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPA 106 (463)
T ss_pred HHHHHHHHhcCcchhhhhhhhhcccccCccch-hhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhH
Confidence 33334444444444444455555554432221 2222222 356677888999999999999999999998888888
Q ss_pred HHHHHhhhHHHHHHHHHHHHhh--hhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHH
Q 018408 169 IISAQAHSLDEMLWGRFLVGLG--IGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTM 246 (356)
Q Consensus 169 ~~~~~~~~~~~~~~~~~l~G~~--~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~ 246 (356)
++..+.. ++.++ +.++. .+...+...++++|....++|....|+.+.....+..++|.+++.+....+ .-.+
T Consensus 107 ~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~-~a~~ 180 (463)
T KOG2816|consen 107 LCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLG-IALV 180 (463)
T ss_pred HHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcC-chHH
Confidence 7776666 33333 33332 344567778899999999999999999999999999999999999988877 7888
Q ss_pred HHHhHHHHHHHHH-HhhcccCCh
Q 018408 247 LYIASLPGFILAL-GMQFTVESP 268 (356)
Q Consensus 247 ~~~~~~~~~~~~~-~~~~~~e~p 268 (356)
|.+.++..++..+ ..+++||+-
T Consensus 181 f~ia~~~~~~~~~y~~~~l~Esl 203 (463)
T KOG2816|consen 181 FLIAAASGILSLLYMLLFLPESL 203 (463)
T ss_pred HHHHHHHHHHHHHHHhhcccccc
Confidence 8888877777765 456688873
No 224
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.67 E-value=3.9e-06 Score=75.14 Aligned_cols=130 Identities=21% Similarity=0.124 Sum_probs=95.3
Q ss_pred HHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhc-----hhHHHHH-hHHHHHHHHHHHHHh-----h------
Q 018408 113 IAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLG-----CRRTFQI-DTIPLILGAIISAQA-----H------ 175 (356)
Q Consensus 113 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-----rr~~~~~-~~~~~~i~~~~~~~~-----~------ 175 (356)
+..|+++ .....+.+.++..+. ....+.+|+.+|+.+ ||..+++ |.++.+.+..+.+++ .
T Consensus 6 MIvEL~v--pA~lv~~lval~~~~-ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~ 82 (403)
T PF03209_consen 6 MIVELGV--PAWLVALLVALHYLV-APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSS 82 (403)
T ss_pred HHHHhcc--HHHHHHHHHHHHHHH-HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccc
Confidence 4567777 444456655555443 346889999999998 8876666 566655555544432 2
Q ss_pred --hHH---HHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHH
Q 018408 176 --SLD---EMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRT 245 (356)
Q Consensus 176 --~~~---~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~ 245 (356)
.+. ...+..++.|++.+...+...++++|..|+++|++..++......+|.+++..+.+.+.+....-|.
T Consensus 83 ~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL 157 (403)
T PF03209_consen 83 GPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERL 157 (403)
T ss_pred cccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHH
Confidence 121 2334567789999999999999999999999999999999999999999999999988876653333
No 225
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.65 E-value=1e-06 Score=78.31 Aligned_cols=156 Identities=18% Similarity=0.140 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHHHHhhhhcchhhHHHHHHH-hCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHH
Q 018408 87 PHVLIASMSNFLFGYHIGVMNGPIVSIAKE-LGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLI 165 (356)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 165 (356)
+.+....++.|++.-.....+.+++.+.++ .|. +..+.+...+.+..+.++|.+++.++..|+...+.+.+..++..
T Consensus 236 ~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~--~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~i 313 (422)
T COG0738 236 KHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGL--NEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAI 313 (422)
T ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 445555556666555555666777767666 566 67778999999999999999999999999999999999998888
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHH
Q 018408 166 LGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRT 245 (356)
Q Consensus 166 i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~ 245 (356)
+.++..+++++...+ .+-++.|++.+..+|...+...+..| ++ ....|..-....+|+++.|.+.|++.|+.+ -..
T Consensus 314 ll~~~~~l~~g~v~~-~~l~~ig~F~simfPTIfslal~~l~-~~-ts~~s~~l~maivGGAiiP~l~G~i~d~~g-~~~ 389 (422)
T COG0738 314 LLLLAVALIGGVVAL-YALFLIGLFNSIMFPTIFSLALKNLG-EH-TSVGSGLLVMAIVGGAIIPPLQGVIADMFG-IQL 389 (422)
T ss_pred HHHHHHHHhcChHHH-HHHHHHHHHhHHHHHHHHHHHHhccC-cc-ccccceeeeeheecchHHHHHHHHHHHhhh-hHH
Confidence 888888888885544 35677899999999999999999998 33 334444455667789999999999999887 444
Q ss_pred HHH
Q 018408 246 MLY 248 (356)
Q Consensus 246 ~~~ 248 (356)
.+.
T Consensus 390 ~~~ 392 (422)
T COG0738 390 TFL 392 (422)
T ss_pred HHH
Confidence 444
No 226
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.65 E-value=2.3e-08 Score=84.19 Aligned_cols=153 Identities=22% Similarity=0.141 Sum_probs=114.5
Q ss_pred hhHHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhh-hchhHHHHHhHH
Q 018408 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK-LGCRRTFQIDTI 162 (356)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~ 162 (356)
++...+..+++..|...+...........+..+.++ +.++..++-++|..-.++-++++|++.|| +|-|..-++-+.
T Consensus 41 hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni--~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~ 118 (459)
T KOG4686|consen 41 HRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNI--EYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCI 118 (459)
T ss_pred hHHHHHHHHHHhcccceeecCCchhhhhhhhccccc--ceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHH
Confidence 344445555555555555555555555666666666 44446677888888888999999999997 687777666666
Q ss_pred HHHHHHHHHH---HhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCC
Q 018408 163 PLILGAIISA---QAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED 238 (356)
Q Consensus 163 ~~~i~~~~~~---~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 238 (356)
...++.++++ ..+.+|.++.+|++.|+|.-........|..-||..++-+..+|+......+|..+...+.+++.+
T Consensus 119 fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~ 197 (459)
T KOG4686|consen 119 FVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYD 197 (459)
T ss_pred HHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHH
Confidence 6677777665 457899999999999999877778888899999999999999999888888887665555554443
No 227
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.58 E-value=2.3e-06 Score=78.68 Aligned_cols=160 Identities=19% Similarity=0.181 Sum_probs=108.4
Q ss_pred chhhHH-HHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhh----hchhHHHHH-hHHHHHHHHHHHHHhhh---
Q 018408 106 MNGPIV-SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK----LGCRRTFQI-DTIPLILGAIISAQAHS--- 176 (356)
Q Consensus 106 ~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr~~~~~-~~~~~~i~~~~~~~~~~--- 176 (356)
...++. .+.+.+|+ +...+|.+..+.=+--++.-++.|.++|| +||+|.+++ +.+..++.+.++-.+++
T Consensus 31 ~~~yLl~fYTdv~Gi--s~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~ 108 (467)
T COG2211 31 VVLYLLFFYTDVFGL--SAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSM 108 (467)
T ss_pred HHHHHHHHHhcccCC--cHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCccc
Confidence 333343 44566788 66667777776666677888999999996 788766555 66888888887776663
Q ss_pred ---HHHHHHHHHHHHhhhhhhhhHHHHHHHhhcC-CCccchhHHHhHHHHHHHHHHHHHhhhccCC----CC--chhHHH
Q 018408 177 ---LDEMLWGRFLVGLGIGVNTVLVPIYISEVAP-TKYRGSLGTLCQVGTCLGIITSLFLGIPAED----DP--HWWRTM 246 (356)
Q Consensus 177 ---~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~----~~--~~w~~~ 246 (356)
..-.++.-.+.+++.........++.+|+.+ +++|.+..+.-+.+..+|.++...+.+.+.. .. .+|+..
T Consensus 109 ~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~ 188 (467)
T COG2211 109 TGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGT 188 (467)
T ss_pred CcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHH
Confidence 3334455778889999888888889999986 5889999999888888886665554443332 21 126666
Q ss_pred HHHhHHHHHHHHHHhhc-ccCC
Q 018408 247 LYIASLPGFILALGMQF-TVES 267 (356)
Q Consensus 247 ~~~~~~~~~~~~~~~~~-~~e~ 267 (356)
..+.+++.++..+..++ .+|.
T Consensus 189 ~~~~~vi~~i~~l~~~~~v~ER 210 (467)
T COG2211 189 ALVLGVIGVILLLFCFFNVKER 210 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhhcc
Confidence 66655555555443333 4444
No 228
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.56 E-value=2.8e-06 Score=80.79 Aligned_cols=145 Identities=15% Similarity=0.056 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHhhhhcchhhHHHHHH-HhCCCCC-hhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHH-HHhHHHHH
Q 018408 89 VLIASMSNFLFGYHIGVMNGPIVSIAK-ELGFEGN-PILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTF-QIDTIPLI 165 (356)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~-~~~~~~~~ 165 (356)
+....+..+..++.+.......|.... -++-+.. ....++....+.++..+|.++.|.+..+++|-|.. +++.+++.
T Consensus 312 ~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~t 391 (599)
T PF06609_consen 312 FAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMT 391 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHH
Confidence 344344445555544444444444332 3443221 12367778888888899999999999988876555 45666665
Q ss_pred HHHHHHHHh--hhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhh
Q 018408 166 LGAIISAQA--HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLG 233 (356)
Q Consensus 166 i~~~~~~~~--~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~ 233 (356)
++.-+++.. +|....+..-++.|++.|...........-..|++.-|.+.++......+|+.++..+.
T Consensus 392 a~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy 461 (599)
T PF06609_consen 392 AFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIY 461 (599)
T ss_pred HHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 554444433 35556667788999999988888877777788999999999998888888877777653
No 229
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.55 E-value=4e-06 Score=79.36 Aligned_cols=136 Identities=14% Similarity=0.061 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhhhchhHH-------HHHhHHHHHHHHHHHH-----Hh-----hhHHHHHHHHHHHH
Q 018408 126 EGLVVSIFIAGAFVGSISSGSLADKLGCRRT-------FQIDTIPLILGAIISA-----QA-----HSLDEMLWGRFLVG 188 (356)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~-------~~~~~~~~~i~~~~~~-----~~-----~~~~~~~~~~~l~G 188 (356)
.+++.++..+..++..++.+++.||+|+|+. +.+|+++.+++.+..+ +. .+.+.++...++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 3556666666777888889999999999973 6677777776664331 21 24667777889999
Q ss_pred hhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCC---------CCchhHHHHHHhHHHHHHHHH
Q 018408 189 LGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED---------DPHWWRTMLYIASLPGFILAL 259 (356)
Q Consensus 189 ~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~---------~~~~w~~~~~~~~~~~~~~~~ 259 (356)
++.+...+....++.+..|++.+|.++|++.+...+|..++..++..... ..+.+.+.|...++..++..+
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v 470 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAV 470 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999888887754421 011145666666655555544
Q ss_pred Hh
Q 018408 260 GM 261 (356)
Q Consensus 260 ~~ 261 (356)
+.
T Consensus 471 ~~ 472 (489)
T PRK10207 471 VM 472 (489)
T ss_pred HH
Confidence 43
No 230
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.52 E-value=7.6e-06 Score=64.23 Aligned_cols=107 Identities=10% Similarity=0.059 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCC
Q 018408 129 VVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPT 208 (356)
Q Consensus 129 ~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~ 208 (356)
-.++......+++++.+.+.+++|.|+.++++.++..+..... +-++.+.++.+-.+.|++.+..++....++.+...+
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~ 120 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTE 120 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCH
Confidence 3455566678888999999999999999999998888665554 456778888999999999999999999999999999
Q ss_pred CccchhHHHhHHHHHHHHHHHHHhhhcc
Q 018408 209 KYRGSLGTLCQVGTCLGIITSLFLGIPA 236 (356)
Q Consensus 209 ~~r~~~~~~~~~~~~~g~~~~~~i~~~l 236 (356)
+.|++..+++-.....+.++|.++...+
T Consensus 121 ~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 121 ETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999987777777777776654433
No 231
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.49 E-value=9.4e-06 Score=77.74 Aligned_cols=138 Identities=15% Similarity=0.083 Sum_probs=101.1
Q ss_pred HHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHH---HHHHHHHHHHhhhhhhhhHHHHHHHhhc
Q 018408 130 VSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLD---EMLWGRFLVGLGIGVNTVLVPIYISEVA 206 (356)
Q Consensus 130 ~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~l~G~~~g~~~~~~~~~~~e~~ 206 (356)
..........+....+.+.|++|||.....+.++..++.++.++..... ...+...+..++.+..+.....+.+|++
T Consensus 356 ~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~ 435 (521)
T KOG0255|consen 356 FTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELI 435 (521)
T ss_pred HHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3334445556666778999999999999999999999999998876443 3555566666667777777789999999
Q ss_pred CCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHhhcccCCh
Q 018408 207 PTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQFTVESP 268 (356)
Q Consensus 207 p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~p 268 (356)
|+..|+.+.+..+....+|.+++|.+..........+.... +.....+.+.+..+++||+.
T Consensus 436 pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~lpet~ 496 (521)
T KOG0255|consen 436 PTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLIL-FGWLALLLGLLSLLLLPETK 496 (521)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHH-HHHHHHHHHHHHHhcCcccC
Confidence 99999999999999999999999998765544221122222 23344444445558899984
No 232
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.49 E-value=3.5e-06 Score=78.72 Aligned_cols=140 Identities=11% Similarity=0.023 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHHHHhHHhhhhhhch-hHHHHHhHHHHHHHHHHHHHhhh---------------------HHHHHHHHH
Q 018408 128 LVVSIFIAGAFVGSISSGSLADKLGC-RRTFQIDTIPLILGAIISAQAHS---------------------LDEMLWGRF 185 (356)
Q Consensus 128 ~~~~~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~~~~~~~i~~~~~~~~~~---------------------~~~~~~~~~ 185 (356)
+....+.+...+.+++..++.+++|+ |++..++.++.+++.+...+.++ .+..++...
T Consensus 309 ~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (477)
T TIGR01301 309 FGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFA 388 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHH
Confidence 33344444455667778889999984 77778898888888877765543 256677788
Q ss_pred HHHhhhhhhhhHHHHHHHhhcCC--CccchhHHHhHHHHHHHHHHHHHhhhccCCCCc-hhHHHHHHhHHHHHHHHHHhh
Q 018408 186 LVGLGIGVNTVLVPIYISEVAPT--KYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH-WWRTMLYIASLPGFILALGMQ 262 (356)
Q Consensus 186 l~G~~~g~~~~~~~~~~~e~~p~--~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~-~w~~~~~~~~~~~~~~~~~~~ 262 (356)
+.|+..+..+..-++++++..+. +..|..+|+.+++..+..++..+..+.+.+..| +-.+.+.++++..+++.+..+
T Consensus 389 ~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~ 468 (477)
T TIGR01301 389 ILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLAL 468 (477)
T ss_pred HhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999995 455999999999999999888877776443332 245677788888888776554
Q ss_pred -cccCC
Q 018408 263 -FTVES 267 (356)
Q Consensus 263 -~~~e~ 267 (356)
.+|++
T Consensus 469 ~~~~~~ 474 (477)
T TIGR01301 469 ILLPRP 474 (477)
T ss_pred HhCCCC
Confidence 46665
No 233
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.44 E-value=4.4e-05 Score=68.56 Aligned_cols=148 Identities=17% Similarity=0.133 Sum_probs=115.9
Q ss_pred HHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhh-hhchhHHHHHhHHHHHHHHHHHHH---hhhHHHHHHHHHH
Q 018408 111 VSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLAD-KLGCRRTFQIDTIPLILGAIISAQ---AHSLDEMLWGRFL 186 (356)
Q Consensus 111 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~Grr~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~l 186 (356)
|+=-+-||+ +..+...++.....|..+|....|++.. |.++++.-.+++.+.+++..+..+ ..+.+.+...-++
T Consensus 233 Pygg~Vfgm--sv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l 310 (403)
T PF03209_consen 233 PYGGEVFGM--SVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFL 310 (403)
T ss_pred CchhHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 455667888 5556778899999999999999998777 678888888888887777766544 3577888889999
Q ss_pred HHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCC---------CchhHHHHHHhHHHHHHH
Q 018408 187 VGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD---------PHWWRTMLYIASLPGFIL 257 (356)
Q Consensus 187 ~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~---------~~~w~~~~~~~~~~~~~~ 257 (356)
.|++.|.........+.++..+++-|..+|.+.....++..++..+++.+.|. ..+|..+|.+-++..+++
T Consensus 311 ~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a 390 (403)
T PF03209_consen 311 LGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAA 390 (403)
T ss_pred HHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988888888888887755542 112666676666655555
Q ss_pred HHH
Q 018408 258 ALG 260 (356)
Q Consensus 258 ~~~ 260 (356)
+++
T Consensus 391 ~~l 393 (403)
T PF03209_consen 391 LVL 393 (403)
T ss_pred HHH
Confidence 443
No 234
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.43 E-value=2e-06 Score=59.37 Aligned_cols=80 Identities=18% Similarity=0.154 Sum_probs=71.0
Q ss_pred HHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHH
Q 018408 99 FGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLD 178 (356)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~ 178 (356)
.|.....+.+.+|.+.++.++ +..+.+++.+...+||.+|.+...++.++..+++.+..+.+...+..+.+++.++.+
T Consensus 4 mGigRFayTplLP~M~~~~~l--s~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~ 81 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGL--SLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFW 81 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence 355666788899999999999 677799999999999999999999999998889999999999999999999988766
Q ss_pred HH
Q 018408 179 EM 180 (356)
Q Consensus 179 ~~ 180 (356)
.+
T Consensus 82 ~w 83 (85)
T PF06779_consen 82 LW 83 (85)
T ss_pred HH
Confidence 54
No 235
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.42 E-value=7.2e-05 Score=69.67 Aligned_cols=147 Identities=11% Similarity=-0.037 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCC---CChhHHHHHHHHHHHHHHHH-HHhHHhhhhhhchhHHHHHhHH
Q 018408 87 PHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFE---GNPILEGLVVSIFIAGAFVG-SISSGSLADKLGCRRTFQIDTI 162 (356)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~-~~~~g~l~dr~Grr~~~~~~~~ 162 (356)
+.++.+.+..|+..+..+ .+-.+.+.+..+ .+.....++-+...+...+. .++.+++++|++|++++.+...
T Consensus 7 ~k~~~~~l~fF~il~~Y~----iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~ 82 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYT----ILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVIS 82 (472)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHH
Confidence 344444444444444432 234556666552 12234677777666665555 8899999999999999888766
Q ss_pred HHHHHHHHHHHh--h--h---------------------------HHHHHHHHHHHHhhhhhhhh-HHHHHHHhhcCCCc
Q 018408 163 PLILGAIISAQA--H--S---------------------------LDEMLWGRFLVGLGIGVNTV-LVPIYISEVAPTKY 210 (356)
Q Consensus 163 ~~~i~~~~~~~~--~--~---------------------------~~~~~~~~~l~G~~~g~~~~-~~~~~~~e~~p~~~ 210 (356)
.+.....++++. + . .|...+......+......+ ..+.+++|.+..++
T Consensus 83 ~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~q 162 (472)
T TIGR00769 83 PFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDE 162 (472)
T ss_pred HHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 666666555543 0 0 11111222233333344444 77889999999999
Q ss_pred cchhHHHhHHHHHHHHHHHHHhhhccC
Q 018408 211 RGSLGTLCQVGTCLGIITSLFLGIPAE 237 (356)
Q Consensus 211 r~~~~~~~~~~~~~g~~~~~~i~~~l~ 237 (356)
-.+..++...+.++|.++++.+..++.
T Consensus 163 akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 163 AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998887765
No 236
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.40 E-value=3.3e-05 Score=71.72 Aligned_cols=141 Identities=11% Similarity=-0.005 Sum_probs=85.0
Q ss_pred chhhHHHH-HHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHH-----HhhhHHH
Q 018408 106 MNGPIVSI-AKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISA-----QAHSLDE 179 (356)
Q Consensus 106 ~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~-----~~~~~~~ 179 (356)
+....|.+ .+.+|. +..+.++.......+..++..+.+.+.++.++++.+.....+..++.++.. ..+++..
T Consensus 237 ~~~~~P~~l~~~~g~--s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~ 314 (413)
T PRK15403 237 WVAVSPVILIDAGGM--TTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLW 314 (413)
T ss_pred HHHhChHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHH
Confidence 33344544 445577 566678877777778888888887766544444443332223233332222 1233434
Q ss_pred HHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhH
Q 018408 180 MLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIAS 251 (356)
Q Consensus 180 ~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~ 251 (356)
.+++.++.+++.+...+......- .-....+|++.++.+.....+..+++.+.+++..+.. .+.|...+
T Consensus 315 ~~~~~~l~~~G~~~~~p~~~~~al-~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~ 383 (413)
T PRK15403 315 SVLGTSLYAFGIGLIFPTLFRFTL-FSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNGG--RLPFHLLA 383 (413)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHh-ccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--chHHHHHH
Confidence 566778888888887777664332 1123347999999888888888888888887765533 44444433
No 237
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.37 E-value=9.2e-06 Score=75.63 Aligned_cols=155 Identities=17% Similarity=0.143 Sum_probs=112.9
Q ss_pred hhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhh-----chhHHHHHhHHHHHHHHHHHHHhh----hHH
Q 018408 108 GPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL-----GCRRTFQIDTIPLILGAIISAQAH----SLD 178 (356)
Q Consensus 108 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----Grr~~~~~~~~~~~i~~~~~~~~~----~~~ 178 (356)
...+.+.+++|+ ++.+...+.+...+.. ...++.|.++|-+ .||..++++.++..++.+..+..+ +..
T Consensus 11 ~~~~~l~~~l~l--s~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~ 87 (433)
T PF03092_consen 11 AIYPFLKDDLGL--SPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAA 87 (433)
T ss_pred HHHHHHHHHcCC--CHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhh
Confidence 345788899999 5655655555555443 3467899999986 355556667777766665555433 455
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHhhcC--CCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHH
Q 018408 179 EMLWGRFLVGLGIGVNTVLVPIYISEVAP--TKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFI 256 (356)
Q Consensus 179 ~~~~~~~l~G~~~g~~~~~~~~~~~e~~p--~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~ 256 (356)
...+..++..++........-+++.|... ++.||...+.......+|.+++..++|.+.+..+ ++..|.+.+++.++
T Consensus 88 ~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~-~~~~f~i~~~~~~l 166 (433)
T PF03092_consen 88 IAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG-PQGVFLISAALPLL 166 (433)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC-CeEEehHHHHHHHH
Confidence 66667788888898999999999999884 3337788888888999999999999999988877 88888888777666
Q ss_pred HHHHhhcccC
Q 018408 257 LALGMQFTVE 266 (356)
Q Consensus 257 ~~~~~~~~~e 266 (356)
..+..+++.|
T Consensus 167 ~~~~~~~~~~ 176 (433)
T PF03092_consen 167 MLIVALFLLE 176 (433)
T ss_pred HHHHHHHhhh
Confidence 6554444433
No 238
>PTZ00207 hypothetical protein; Provisional
Probab=98.35 E-value=6.9e-06 Score=78.52 Aligned_cols=160 Identities=14% Similarity=0.076 Sum_probs=108.9
Q ss_pred HHHHHHHh-CCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchh---------HHHHHhHHHHHHHHHHHHHhhhHHH
Q 018408 110 IVSIAKEL-GFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCR---------RTFQIDTIPLILGAIISAQAHSLDE 179 (356)
Q Consensus 110 ~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr---------~~~~~~~~~~~i~~~~~~~~~~~~~ 179 (356)
+..+.+.+ |.+.+......+++++.++..+|.+..|.+....-+| ..+.+..+ +.++.+++++.-....
T Consensus 376 ~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~ 454 (591)
T PTZ00207 376 ARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAA 454 (591)
T ss_pred HHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccH
Confidence 34677777 6632221111267888888888988888877222111 22333333 5555555555544368
Q ss_pred HHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHH-HHhhhccCCCCc---------h---hHHH
Q 018408 180 MLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITS-LFLGIPAEDDPH---------W---WRTM 246 (356)
Q Consensus 180 ~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~-~~i~~~l~~~~~---------~---w~~~ 246 (356)
+++.-++.|++.|..+++....++|+|. ++-|+-..+..+...+|..+- ..+.|.+.|+.. + ++..
T Consensus 455 L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~ 533 (591)
T PTZ00207 455 LPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMP 533 (591)
T ss_pred hHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhH
Confidence 9999999999999999999999999999 888998888888888888776 456666664321 1 7788
Q ss_pred HHHhHHHHHHHHHHhhc-ccCChHHH
Q 018408 247 LYIASLPGFILALGMQF-TVESPRWL 271 (356)
Q Consensus 247 ~~~~~~~~~~~~~~~~~-~~e~p~~~ 271 (356)
|++.+.+++++.+.... .-++.+++
T Consensus 534 ~~v~~~~~~~g~~~s~~l~~R~r~~y 559 (591)
T PTZ00207 534 LAFLLGLSFLAFITSTYVHLQYRRLC 559 (591)
T ss_pred HHHHHHHHHHHHHHHhheeeehHHHH
Confidence 88888888877765433 33554443
No 239
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.29 E-value=1.6e-05 Score=74.51 Aligned_cols=160 Identities=16% Similarity=0.101 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHhhhhcchhhHHHHHHH-hCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhh----hchhHHHHHhHH
Q 018408 88 HVLIASMSNFLFGYHIGVMNGPIVSIAKE-LGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK----LGCRRTFQIDTI 162 (356)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr~~~~~~~~ 162 (356)
.++..+++.+......+.+..++|.+.++ .|+ +..+.+.+.+.+.++.+++.+++|+++|| ..+|..+.....
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~--s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~ 351 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGY--SELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLC 351 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCc--ChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 35666777777777777778888888877 345 66678899999999999999999999999 667766666555
Q ss_pred HHHHHH-HHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCcc-chhHHHhHHHHHHHHHHHHHh-hhccCCC
Q 018408 163 PLILGA-IISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYR-GSLGTLCQVGTCLGIITSLFL-GIPAEDD 239 (356)
Q Consensus 163 ~~~i~~-~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r-~~~~~~~~~~~~~g~~~~~~i-~~~l~~~ 239 (356)
+..+.. +......+......+.+....+.+...+......++....+.| -...+....+.+.++++++.+ .+.....
T Consensus 352 ~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~ 431 (495)
T KOG2533|consen 352 LYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPR 431 (495)
T ss_pred HHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcc
Confidence 544444 3333333333333333333444555556666666666655444 344445555555555555544 3333333
Q ss_pred CchhHHHHHHh
Q 018408 240 PHWWRTMLYIA 250 (356)
Q Consensus 240 ~~~w~~~~~~~ 250 (356)
.. |...|++.
T Consensus 432 y~-~~~~f~~~ 441 (495)
T KOG2533|consen 432 YG-WGAVFYML 441 (495)
T ss_pred hh-hhhHHHHH
Confidence 45 77777443
No 240
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.26 E-value=8.6e-06 Score=55.77 Aligned_cols=68 Identities=24% Similarity=0.307 Sum_probs=55.1
Q ss_pred HHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHH
Q 018408 94 MSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIP 163 (356)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 163 (356)
..++......+...+.++.+.++.|+ +..+.|.+.++..+...++.+++|.++||+|+++.++....+
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~~~Gl--~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLKQLGL--SPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 33444445556667777778888888 788899999999999999999999999999999988766544
No 241
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.03 E-value=6.5e-05 Score=66.47 Aligned_cols=123 Identities=11% Similarity=0.108 Sum_probs=102.9
Q ss_pred HHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhc--hhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhh
Q 018408 115 KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLG--CRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIG 192 (356)
Q Consensus 115 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G--rr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g 192 (356)
+.+|+ ++.+.|-+.+...+++.+.+....+..||.. -+-.+..++.++.-..++...++....+.++-.+-.+..+
T Consensus 290 ~rfg~--ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A 367 (451)
T KOG2615|consen 290 GRFGY--SSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTA 367 (451)
T ss_pred CccCC--ChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHH
Confidence 45666 6677888888888888888888888888876 6666666777777667777778888888888888899888
Q ss_pred hhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCC
Q 018408 193 VNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDD 239 (356)
Q Consensus 193 ~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 239 (356)
...+....++....|.++||..+|+......++-++||.++|.....
T Consensus 368 ~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 368 SVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred HhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 88888899999999999999999999999999999999999876653
No 242
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.02 E-value=0.00051 Score=61.89 Aligned_cols=144 Identities=18% Similarity=0.100 Sum_probs=93.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHH-hHHHHHHHHHHHHHhhh---HHHHHHHHHHHHhhhhhhhhHH
Q 018408 123 PILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQI-DTIPLILGAIISAQAHS---LDEMLWGRFLVGLGIGVNTVLV 198 (356)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~-~~~~~~i~~~~~~~~~~---~~~~~~~~~l~G~~~g~~~~~~ 198 (356)
+...+...++..+...+-.++.|.++|..|+||..+. ...+..++.++..++++ ++..++...+..++........
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfy 136 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFY 136 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheeh
Confidence 3446666777777778889999999999998876655 44555555566666654 3444555677888888888889
Q ss_pred HHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhh---hccC---------------CCCchhHHHHHHhHHHHHHHHH-
Q 018408 199 PIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLG---IPAE---------------DDPHWWRTMLYIASLPGFILAL- 259 (356)
Q Consensus 199 ~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~---~~l~---------------~~~~~w~~~~~~~~~~~~~~~~- 259 (356)
.+++.+..++++-++..++-.....+|+.+.-++. .... +... -|..+.++++..++..+
T Consensus 137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~-~ri~~~l~A~W~li~~iP 215 (438)
T COG2270 137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGED-VRITGLLAALWWLLFALP 215 (438)
T ss_pred hhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCcccccc-chhHHHHHHHHHHHHHhH
Confidence 99999999988777776665444445544443331 0011 2223 67777777666655544
Q ss_pred HhhcccCC
Q 018408 260 GMQFTVES 267 (356)
Q Consensus 260 ~~~~~~e~ 267 (356)
.+++.++.
T Consensus 216 m~~~v~~~ 223 (438)
T COG2270 216 MILNVHDA 223 (438)
T ss_pred HHhccccc
Confidence 44445554
No 243
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.95 E-value=0.00077 Score=63.49 Aligned_cols=112 Identities=13% Similarity=0.066 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhhhch--hH-----HHHHhHHHHHHHHHHHHHh---------hhHHHHHHHHHHHHh
Q 018408 126 EGLVVSIFIAGAFVGSISSGSLADKLGC--RR-----TFQIDTIPLILGAIISAQA---------HSLDEMLWGRFLVGL 189 (356)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~g~l~dr~Gr--r~-----~~~~~~~~~~i~~~~~~~~---------~~~~~~~~~~~l~G~ 189 (356)
.+|..++..+.-++..++.+++=.|.+| |. =+.+|+++.+++.+++.++ .+.+++++..+++++
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~ 389 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGF 389 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 5677777777777777777777666633 21 1566778878777666432 255678888999999
Q ss_pred hhhhhhhHHHHHHHhhcCCCccchhHHHhHHH-HHHHHHHHHHhhhccC
Q 018408 190 GIGVNTVLVPIYISEVAPTKYRGSLGTLCQVG-TCLGIITSLFLGIPAE 237 (356)
Q Consensus 190 ~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~-~~~g~~~~~~i~~~l~ 237 (356)
|.-...|+..++++++.|++.||+.+|.+... ..+|..++..++....
T Consensus 390 gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~ 438 (493)
T PRK15462 390 AELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTS 438 (493)
T ss_pred HHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999998764 4688888777766553
No 244
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.94 E-value=3.6e-05 Score=69.62 Aligned_cols=136 Identities=12% Similarity=0.146 Sum_probs=94.2
Q ss_pred HHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhh----hchhHHHHH-hHHHHHHHHHHHHH
Q 018408 99 FGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK----LGCRRTFQI-DTIPLILGAIISAQ 173 (356)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr~~~~~-~~~~~~i~~~~~~~ 173 (356)
.-+....-..+.+.+.+++|.+ ....+.+...--+...+-+++.|..+|| +||||.++. +.++..++.++..+
T Consensus 44 vqf~wA~elsy~tPyl~~lGvp--hk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~ 121 (498)
T KOG0637|consen 44 VQFGWALELSYLTPYLQSLGVP--HKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGY 121 (498)
T ss_pred HHHHHHHHhccccHHHHHcCCC--cccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhh
Confidence 3334344444555667788884 3335555555555667778999999996 799988777 45556666666666
Q ss_pred hhhH-----------------HHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccch-hHHHhHHHHHHHHHHHHHhhhc
Q 018408 174 AHSL-----------------DEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGS-LGTLCQVGTCLGIITSLFLGIP 235 (356)
Q Consensus 174 ~~~~-----------------~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~-~~~~~~~~~~~g~~~~~~i~~~ 235 (356)
+..+ ..++++.-+.=++.......+-+++.|+...+++-+ +++++..+..+|+.+|..++.+
T Consensus 122 aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y 201 (498)
T KOG0637|consen 122 AADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSY 201 (498)
T ss_pred HhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccc
Confidence 5332 233344444555666788889999999998877777 9999999999999998887764
Q ss_pred c
Q 018408 236 A 236 (356)
Q Consensus 236 l 236 (356)
.
T Consensus 202 ~ 202 (498)
T KOG0637|consen 202 L 202 (498)
T ss_pred c
Confidence 4
No 245
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.89 E-value=0.00043 Score=61.34 Aligned_cols=147 Identities=14% Similarity=0.163 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhh-----hhchhHHHHH-
Q 018408 86 FPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLAD-----KLGCRRTFQI- 159 (356)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----r~Grr~~~~~- 159 (356)
...+..+.+.+..+|.-.+... .+|.+.+.-|.+.+. .+....++. -..-.+++.++.| |+||||..++
T Consensus 30 ~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~--~a~fS~ay~--P~sLKllWaPiVDs~y~k~~GrrksWvvp 104 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTS--QAIFSFAYW--PFSLKLLWAPIVDSVYSKRFGRRKSWVVP 104 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhh--hhhhhhhhh--HHHHHHHHHhhhHHHHHHhhccccceeee
Confidence 4456677777888888877777 788888876764333 333322221 1233578888999 9999997665
Q ss_pred hHHHHHHHHHHHHHh-----------hhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHH
Q 018408 160 DTIPLILGAIISAQA-----------HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIIT 228 (356)
Q Consensus 160 ~~~~~~i~~~~~~~~-----------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 228 (356)
+..+.+..++..+.. ++...+....++.-+..+.-....-...-.+..+++-|-+......+...|.++
T Consensus 105 ~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL 184 (510)
T KOG3574|consen 105 CQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFL 184 (510)
T ss_pred hHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHh
Confidence 444444444444432 233334445566667776666666667777788888888888888888888888
Q ss_pred HHHhhhccC
Q 018408 229 SLFLGIPAE 237 (356)
Q Consensus 229 ~~~i~~~l~ 237 (356)
+..+.-.+.
T Consensus 185 ~~~ifLaL~ 193 (510)
T KOG3574|consen 185 GNVVFLALE 193 (510)
T ss_pred hcceeeEec
Confidence 876654443
No 246
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.78 E-value=0.0002 Score=65.51 Aligned_cols=108 Identities=16% Similarity=0.157 Sum_probs=86.7
Q ss_pred HHHHHhHHHHHHHHHHHHHh--h-------hHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCC---ccchhHHHhHHHH
Q 018408 155 RTFQIDTIPLILGAIISAQA--H-------SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTK---YRGSLGTLCQVGT 222 (356)
Q Consensus 155 ~~~~~~~~~~~i~~~~~~~~--~-------~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~---~r~~~~~~~~~~~ 222 (356)
++++++.++..++.++..++ + +...++++.++.++|.|+.=+....+.+|.++++ +|..+..++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 46777888888888875443 2 2357888899999999999999999999999875 3556777889999
Q ss_pred HHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHHhhc
Q 018408 223 CLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALGMQF 263 (356)
Q Consensus 223 ~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~ 263 (356)
++|..++..+.+++.++.+ |.+.|.++++..+++++..+.
T Consensus 82 n~G~~~~~~~~~~i~~~~~-~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYG-WFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccccc-hhhhhhHHHHHHHHHHHHHHh
Confidence 9999999999999988888 999999998888877766554
No 247
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.72 E-value=0.002 Score=61.87 Aligned_cols=155 Identities=15% Similarity=0.095 Sum_probs=114.9
Q ss_pred chhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhh-chhHHHHHhHHHHHHHHHHHHHhhh--------
Q 018408 106 MNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKL-GCRRTFQIDTIPLILGAIISAQAHS-------- 176 (356)
Q Consensus 106 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~i~~~~~~~~~~-------- 176 (356)
......++.++++.+ ...+.-....+........+++++++|-| ||-+++.++.++..++..+..++..
T Consensus 57 ~~nlv~ylt~~~~~~--~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~ 134 (571)
T KOG1237|consen 57 VSNLVTYLTLELHAS--GGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFM 134 (571)
T ss_pred hhHHHHHHHHHhccc--hHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc
Confidence 455567888888884 34455556666666677788999999986 9999999988888888655543211
Q ss_pred -----------------HHHHHHHHHHHHhhhhhhhhHHHHHHHhhcC---C-C--ccchhHHHhHHHHHHHHHHHHHhh
Q 018408 177 -----------------LDEMLWGRFLVGLGIGVNTVLVPIYISEVAP---T-K--YRGSLGTLCQVGTCLGIITSLFLG 233 (356)
Q Consensus 177 -----------------~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p---~-~--~r~~~~~~~~~~~~~g~~~~~~i~ 233 (356)
...++.+..+..+|.|+.-+....+-+|-++ + + .+...+.++....++|..++..+.
T Consensus 135 ~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~ 214 (571)
T KOG1237|consen 135 CKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVL 214 (571)
T ss_pred ccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHH
Confidence 1245556677788899988999999999998 2 2 223677788999999999999998
Q ss_pred hccCCCCchhHHHHHHhHHHHHHHHHHhhc
Q 018408 234 IPAEDDPHWWRTMLYIASLPGFILALGMQF 263 (356)
Q Consensus 234 ~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~ 263 (356)
.+..+..+ |.+.|.+..+..++++++.+.
T Consensus 215 vyiq~~~~-w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 215 VYIQDNVG-WKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred Hhhhhccc-ceeeccHHHHHHHHHHHHHHc
Confidence 88877777 999998887776666554433
No 248
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.62 E-value=0.0066 Score=56.11 Aligned_cols=147 Identities=19% Similarity=0.164 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHH
Q 018408 89 VLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA 168 (356)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 168 (356)
.+..+++..+..+..-.+...+..+...-|+ ++...|..-+...+..+.|.+...++.+|+|..|.=.++.....++.
T Consensus 260 vflas~alalLY~TVLsf~~lmt~yl~~~G~--s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L 337 (432)
T PF06963_consen 260 VFLASFALALLYFTVLSFGGLMTAYLKSQGY--SPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCL 337 (432)
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHH
Confidence 4444544444434333445555555556688 66678888888888899999999999999999988777766555444
Q ss_pred HHHHH---h---h----hHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccC
Q 018408 169 IISAQ---A---H----SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAE 237 (356)
Q Consensus 169 ~~~~~---~---~----~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 237 (356)
.++.. . + +...++.+-.+.-+|.=+..-...-++.|..|.++||...|.-....++.-++...++-.+.
T Consensus 338 ~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~ 416 (432)
T PF06963_consen 338 ALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFP 416 (432)
T ss_pred HHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 43322 1 1 23344444555556655666777778899999999999999988888887777766655443
No 249
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.58 E-value=0.0027 Score=59.30 Aligned_cols=122 Identities=15% Similarity=0.065 Sum_probs=101.1
Q ss_pred HHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHH-hhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 018408 112 SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSG-SLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLG 190 (356)
Q Consensus 112 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~ 190 (356)
++...+++ +..+.+.+.+...+...+++++.. .+...+|-|+++.+|+....+...+.+++++.++++....+.++.
T Consensus 267 yl~~~f~w--~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~ 344 (463)
T KOG2816|consen 267 YLKAKFGW--NKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA 344 (463)
T ss_pred EEeeecCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh
Confidence 44567788 566688777877777788877766 777788999999999999999999999999999988887776665
Q ss_pred hhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhcc
Q 018408 191 IGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPA 236 (356)
Q Consensus 191 ~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 236 (356)
. ...+...++++-+..++++|+..++....-.+..+++|.+-+.+
T Consensus 345 ~-~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 345 G-IVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred c-chhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHH
Confidence 4 55688888999999999999999999999888888888876544
No 250
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.54 E-value=0.0019 Score=59.74 Aligned_cols=102 Identities=12% Similarity=-0.008 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCC
Q 018408 130 VSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTK 209 (356)
Q Consensus 130 ~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~ 209 (356)
.++....+.+++++.+.+.|+.|.|..++++..+.....+...+ .|-+-+++.-.+.|+|.+..+.....|++|...++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 66677778899999999999999999999999998888777755 45666778899999999999999999999999999
Q ss_pred ccchhHHHhHHHHHHHHHHHHHh
Q 018408 210 YRGSLGTLCQVGTCLGIITSLFL 232 (356)
Q Consensus 210 ~r~~~~~~~~~~~~~g~~~~~~i 232 (356)
.+.+..++.-.....+.++|..+
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~ 157 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGII 157 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHh
Confidence 99998888766666666666544
No 251
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.44 E-value=0.015 Score=54.81 Aligned_cols=150 Identities=15% Similarity=0.073 Sum_probs=88.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCC-ChhHHHHHHHHHHH-HHHHHHHhHHhhhhhhchhHHHHHhHH
Q 018408 85 AFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEG-NPILEGLVVSIFIA-GAFVGSISSGSLADKLGCRRTFQIDTI 162 (356)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~Grr~~~~~~~~ 162 (356)
.++.++.+.+..|+..+..+..- .+.+.+=.+. .+....++=....+ +..+...+..+++++++|.+++-+...
T Consensus 22 E~~k~~~l~~m~f~i~f~y~~lR----~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~ 97 (491)
T PF03219_consen 22 ELKKFLPLALMFFFILFNYTILR----DLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIII 97 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 34556666666666655543322 2222211100 12223344333322 455667788999999999998877665
Q ss_pred HHHHHHHHHHHh---------hh----------------------HHHHHHHHHHHHhhhhhhhh-HHHHHHHhhcCCCc
Q 018408 163 PLILGAIISAQA---------HS----------------------LDEMLWGRFLVGLGIGVNTV-LVPIYISEVAPTKY 210 (356)
Q Consensus 163 ~~~i~~~~~~~~---------~~----------------------~~~~~~~~~l~G~~~g~~~~-~~~~~~~e~~p~~~ 210 (356)
.+.....++++. ++ .|.+.+.-...-+-.....+ .-+.+.+|.++.++
T Consensus 98 ~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~e 177 (491)
T PF03219_consen 98 PFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEE 177 (491)
T ss_pred HHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 555555555432 11 11111111222222223333 45889999999999
Q ss_pred cchhHHHhHHHHHHHHHHHHHhhhccCC
Q 018408 211 RGSLGTLCQVGTCLGIITSLFLGIPAED 238 (356)
Q Consensus 211 r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 238 (356)
-.+..+++..+.++|.++++.+...+.+
T Consensus 178 AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 178 AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888777766
No 252
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.37 E-value=0.034 Score=51.65 Aligned_cols=106 Identities=17% Similarity=0.185 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhh---hchhHHHHHhHHHHHHHHHHHHHh------------------hhHHHHHHHH
Q 018408 126 EGLVVSIFIAGAFVGSISSGSLADK---LGCRRTFQIDTIPLILGAIISAQA------------------HSLDEMLWGR 184 (356)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~g~l~dr---~Grr~~~~~~~~~~~i~~~~~~~~------------------~~~~~~~~~~ 184 (356)
.+.......+|..++..+.+.+.+| +||++.+.++..+..+..++.-.. +++....+.-
T Consensus 281 ~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~ 360 (461)
T KOG3098|consen 281 IAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIG 360 (461)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHH
Confidence 4444445556666667777777755 799999999888888887776542 2355667778
Q ss_pred HHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHh
Q 018408 185 FLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFL 232 (356)
Q Consensus 185 ~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i 232 (356)
++.|++-+......+.++...+ ++.|..+.+++-+-..++..++...
T Consensus 361 ~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~ 407 (461)
T KOG3098|consen 361 FLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFF 407 (461)
T ss_pred HHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhh
Confidence 8999999999999999999999 5668888888766666666555444
No 253
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.34 E-value=0.0043 Score=56.45 Aligned_cols=108 Identities=22% Similarity=0.180 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHH-----HHHHHhhhHHHHHHHHHHHHhhhhhhhhHHH
Q 018408 125 LEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA-----IISAQAHSLDEMLWGRFLVGLGIGVNTVLVP 199 (356)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~-----~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~ 199 (356)
+..+....|.+|-.++.--...+ |+ |+..+.+.+..+-.. .+.-+.++.+.+++..+..|+..|..+.-..
T Consensus 282 ~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF 357 (402)
T PF02487_consen 282 QYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTF 357 (402)
T ss_pred HHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 35566666766655543222111 33 333333332222111 2223457888888889999999999999999
Q ss_pred HHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhcc
Q 018408 200 IYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPA 236 (356)
Q Consensus 200 ~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 236 (356)
..+.|-.|+++|-.++|...++-++|..++.+++-.+
T Consensus 358 ~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 358 YRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998887654
No 254
>PRK03612 spermidine synthase; Provisional
Probab=97.34 E-value=0.042 Score=52.50 Aligned_cols=140 Identities=18% Similarity=0.027 Sum_probs=76.4
Q ss_pred HHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHH-hHHHHH-HHHHHHHHhhh----H-HHHHHHHHHH
Q 018408 115 KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQI-DTIPLI-LGAIISAQAHS----L-DEMLWGRFLV 187 (356)
Q Consensus 115 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~-~~~~~~-i~~~~~~~~~~----~-~~~~~~~~l~ 187 (356)
--+|- +....+.+.+++..|..+|+.+++++.++.-|+...+- ...+.+ ++..+...... . ..++...++.
T Consensus 43 ~~~G~--s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 120 (521)
T PRK03612 43 YLLGD--SVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLI 120 (521)
T ss_pred HHhCc--hHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34565 56668889999999999999999888744333322111 111111 11111111111 1 1223344566
Q ss_pred HhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccC-CCCchhHHHHHHhHHHHHHH
Q 018408 188 GLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAE-DDPHWWRTMLYIASLPGFIL 257 (356)
Q Consensus 188 G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~-~~~~~w~~~~~~~~~~~~~~ 257 (356)
++..|+..|....+..+... ++-|...|-......+|+++|.++.+++. ...|..+..+.++++..+++
T Consensus 121 ~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a 190 (521)
T PRK03612 121 GLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAA 190 (521)
T ss_pred HHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 77788877776666554322 22355667777778888888887766544 34553444444444333333
No 255
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.30 E-value=0.084 Score=48.92 Aligned_cols=151 Identities=11% Similarity=-0.018 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCC-CChhHHHHHHHHHHH-HHHHHHHhHHhhhhhhchhHHHHHhHHH
Q 018408 86 FPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFE-GNPILEGLVVSIFIA-GAFVGSISSGSLADKLGCRRTFQIDTIP 163 (356)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 163 (356)
+..++.+.+..++..+..+. +-.+.+.+..+ ..+....++=+...+ ++.+..++.+++.+++.|.+++.+.+..
T Consensus 26 ~~kflpl~Ll~f~I~~ny~~----lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~ 101 (509)
T COG3202 26 LKKFLPLALLFFCILFNYNL----LRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGF 101 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 44445555555555554433 33455555443 123335566555555 6778888999999999999998887766
Q ss_pred HHHHHHHHHHh---------hh-----------------------HHHHHHHHHHHHhhhhhhhh-HHHHHHHhhcCCCc
Q 018408 164 LILGAIISAQA---------HS-----------------------LDEMLWGRFLVGLGIGVNTV-LVPIYISEVAPTKY 210 (356)
Q Consensus 164 ~~i~~~~~~~~---------~~-----------------------~~~~~~~~~l~G~~~g~~~~-~~~~~~~e~~p~~~ 210 (356)
+..+.+++++. ++ .|...+...+.=+-...... .-+...+|....++
T Consensus 102 F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~e 181 (509)
T COG3202 102 FLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEE 181 (509)
T ss_pred HHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 66666666642 11 01111111222222222223 45778899999999
Q ss_pred cchhHHHhHHHHHHHHHHHHHhhhccCCCC
Q 018408 211 RGSLGTLCQVGTCLGIITSLFLGIPAEDDP 240 (356)
Q Consensus 211 r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 240 (356)
-.+..++++++.+++..++..+..++..+.
T Consensus 182 akRFy~lf~l~~ni~lllsg~~~~~~~k~~ 211 (509)
T COG3202 182 AKRFYPLFGLGANISLLLSGEVTSWLSKHR 211 (509)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhch
Confidence 999999999999999999999988887644
No 256
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.23 E-value=0.03 Score=50.77 Aligned_cols=91 Identities=10% Similarity=-0.033 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHH
Q 018408 177 LDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFI 256 (356)
Q Consensus 177 ~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~ 256 (356)
+...++.-.+.+++.|..+...+...++ +|++.-...++=.++++.+-+.+.-..-....+...+-...|.+..++.++
T Consensus 117 f~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqavm~G~a~aG~l~Sl~~i~tka~~~~~~~sA~~yF~~s~~~~ll 195 (406)
T KOG1479|consen 117 FLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQAVMSGQALAGTLTSLLRILTKAAFSDSRTSALIYFITSTVILLL 195 (406)
T ss_pred HHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHHHHHhcchhHhHHHHHHHHHHHHhcCCCCceeehhHHHHHHHHHH
Confidence 4455566777888888777777766655 565544333332233333322222222222223222244556666777777
Q ss_pred HHHHhhcccCCh
Q 018408 257 LALGMQFTVESP 268 (356)
Q Consensus 257 ~~~~~~~~~e~p 268 (356)
+++++..+|+.|
T Consensus 196 C~i~y~~l~~lp 207 (406)
T KOG1479|consen 196 CFVLYLVLPKLP 207 (406)
T ss_pred HHHHHHHhhcch
Confidence 777777777776
No 257
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.23 E-value=0.026 Score=52.29 Aligned_cols=134 Identities=13% Similarity=0.008 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhhhchh-------HHHHHhHHHHHHHHHHHHHh----------hhHHHHHHHHHHHH
Q 018408 126 EGLVVSIFIAGAFVGSISSGSLADKLGCR-------RTFQIDTIPLILGAIISAQA----------HSLDEMLWGRFLVG 188 (356)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr-------~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~~~~l~G 188 (356)
.++..+...+.-++..++..++..+.+++ .-+-+++++++.+.++.... .+.++++...++++
T Consensus 326 ~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s 405 (498)
T COG3104 326 PAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQS 405 (498)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHH
Confidence 46777777777778888877777775554 22445666666665555433 25678888899999
Q ss_pred hhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccC------CCCchhHHHHHHhHHHHHHHHHH
Q 018408 189 LGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAE------DDPHWWRTMLYIASLPGFILALG 260 (356)
Q Consensus 189 ~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~------~~~~~w~~~~~~~~~~~~~~~~~ 260 (356)
++.=+..++...+++...|++..+..++++.+....|..++..+++.-. +... ....|+..+...++..+.
T Consensus 406 ~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~-~~~~F~~~g~v~i~~~~~ 482 (498)
T COG3104 406 FGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFI-EGRVFGTIGVVAIVIGIL 482 (498)
T ss_pred HHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhh-hhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998888888888877776322 2222 445566655555544433
No 258
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.16 E-value=0.003 Score=57.66 Aligned_cols=151 Identities=21% Similarity=0.133 Sum_probs=84.2
Q ss_pred HHHHHHHHHhhhhcchhhHH----HHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhch-------hHHHHHh
Q 018408 92 ASMSNFLFGYHIGVMNGPIV----SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGC-------RRTFQID 160 (356)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-------r~~~~~~ 160 (356)
..+++....+..+.+..+.| +..+-.|.+.+. ..++..++..+..+|.+++|.++||+.| .+.=.+.
T Consensus 249 ~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~--~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~ 326 (493)
T KOG1330|consen 249 SSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNA--TLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLS 326 (493)
T ss_pred ehHHHHHHHHhccccchhhhhHHHHHHHHhCCcccc--chhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHH
Confidence 34444444444444444443 223333543233 4577788888999999999999999533 2221222
Q ss_pred HHH----HHHHHHHHHH-hhhHHHHHHHHHHHHhhhhh-hhhHHHHHHHhhcCCCccchhHHHh-HHHHHHHHHHHHHhh
Q 018408 161 TIP----LILGAIISAQ-AHSLDEMLWGRFLVGLGIGV-NTVLVPIYISEVAPTKYRGSLGTLC-QVGTCLGIITSLFLG 233 (356)
Q Consensus 161 ~~~----~~i~~~~~~~-~~~~~~~~~~~~l~G~~~g~-~~~~~~~~~~e~~p~~~r~~~~~~~-~~~~~~g~~~~~~i~ 233 (356)
..+ .+.+..+... ..+...+.+..+++|..... ..+...-...|..|++.|..+.++- .+...+|-+-+|.+.
T Consensus 327 ~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~iv 406 (493)
T KOG1330|consen 327 AALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIV 406 (493)
T ss_pred HhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCccee
Confidence 222 2222222221 22233333344555554333 3455556778999999999999985 455566666667677
Q ss_pred hccCCCCchhH
Q 018408 234 IPAEDDPHWWR 244 (356)
Q Consensus 234 ~~l~~~~~~w~ 244 (356)
|.+.++..+|+
T Consensus 407 Gilsd~l~g~~ 417 (493)
T KOG1330|consen 407 GILSDKLRGYK 417 (493)
T ss_pred hhHHHHhhCCC
Confidence 87777643354
No 259
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.07 E-value=0.0033 Score=57.26 Aligned_cols=151 Identities=13% Similarity=0.069 Sum_probs=90.2
Q ss_pred HHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhch-hHHHHHhHHHHHHHHHHHHHhh----hHHHHHHHHHHHHh
Q 018408 115 KELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGC-RRTFQIDTIPLILGAIISAQAH----SLDEMLWGRFLVGL 189 (356)
Q Consensus 115 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~~l~G~ 189 (356)
..-|+ +....|++.....++.++++++.|.+.||... |.++.+......++..+....+ ..+.++..-.+.|+
T Consensus 294 ~~sgY--~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~ 371 (480)
T KOG2563|consen 294 CPSGY--EGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGF 371 (480)
T ss_pred ccccC--CccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHH
Confidence 34456 33558999999999999999999999999754 5555555555555533222221 23344555667788
Q ss_pred hhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCc--hhHH-HHHHhHHHHHHHHHHhhcccC
Q 018408 190 GIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH--WWRT-MLYIASLPGFILALGMQFTVE 266 (356)
Q Consensus 190 ~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~--~w~~-~~~~~~~~~~~~~~~~~~~~e 266 (356)
+..+..|+..-+-.|..-+..-+.-.|+.++...+-+.+-.++-+...+..+ +|.. .-+......++.+++..++++
T Consensus 372 ~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~ 451 (480)
T KOG2563|consen 372 FGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRP 451 (480)
T ss_pred hhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhh
Confidence 8878888777777776655555667777665555555555555555544332 1233 222333334444444445544
Q ss_pred C
Q 018408 267 S 267 (356)
Q Consensus 267 ~ 267 (356)
.
T Consensus 452 ~ 452 (480)
T KOG2563|consen 452 D 452 (480)
T ss_pred h
Confidence 3
No 260
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.03 E-value=0.0017 Score=58.96 Aligned_cols=125 Identities=17% Similarity=0.038 Sum_probs=86.6
Q ss_pred HHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccc
Q 018408 133 FIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRG 212 (356)
Q Consensus 133 ~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~ 212 (356)
-.+-..+..+++.++.+|+.-+.=+.+..+++.++.++.+++++.+.-+++-.+.+++.|........+.. .+++
T Consensus 68 di~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~~---- 142 (402)
T PF02487_consen 68 DILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FYGK---- 142 (402)
T ss_pred HHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hcCc----
Confidence 33445566677788888886554455667788888888899999998888999999999888887777644 5554
Q ss_pred hhHHHhHHHHHHHHHHHHHhhhccCCCCc-hhHHHHHHhHHHHHHHHHHhhc
Q 018408 213 SLGTLCQVGTCLGIITSLFLGIPAEDDPH-WWRTMLYIASLPGFILALGMQF 263 (356)
Q Consensus 213 ~~~~~~~~~~~~g~~~~~~i~~~l~~~~~-~w~~~~~~~~~~~~~~~~~~~~ 263 (356)
...+-+..+.+.++++|+..-..+.+ .+ +-|..+.+...+.++..+.+++
T Consensus 143 ~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~ 193 (402)
T PF02487_consen 143 SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFF 193 (402)
T ss_pred cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 34667777777777777776555554 32 1466666666555555544444
No 261
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.96 E-value=0.001 Score=56.34 Aligned_cols=91 Identities=23% Similarity=0.273 Sum_probs=61.4
Q ss_pred HHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhh
Q 018408 112 SIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGI 191 (356)
Q Consensus 112 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~ 191 (356)
++-+++|+...+ ++.+...-+...++...+.|-++||-|||+..+.-++-..+++ +.-.++.+..++++|.+.|++.
T Consensus 62 yLYstYgFgkG~--IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmVGR~LGGiaT 138 (454)
T KOG4332|consen 62 YLYSTYGFGKGD--IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMVGRVLGGIAT 138 (454)
T ss_pred eeehhcCccCCc--cceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEeehhhhhhHHH
Confidence 445667774333 5555444444556777788899999999997665444443332 2234578899999999999999
Q ss_pred hhhhhHHHH-HHHhh
Q 018408 192 GVNTVLVPI-YISEV 205 (356)
Q Consensus 192 g~~~~~~~~-~~~e~ 205 (356)
+..+....+ ++.|-
T Consensus 139 sLLFSaFEsWliaEH 153 (454)
T KOG4332|consen 139 SLLFSAFESWLIAEH 153 (454)
T ss_pred HHHHHHHHHHHHHHh
Confidence 887776655 34554
No 262
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=96.96 E-value=0.0043 Score=57.28 Aligned_cols=143 Identities=13% Similarity=0.125 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHhhhhcchhhHHHHHHH--hCCCCChhHHHHHHHHHHHHHH-HHHHhHHhhhh-----hhchhHHHHHhH
Q 018408 90 LIASMSNFLFGYHIGVMNGPIVSIAKE--LGFEGNPILEGLVVSIFIAGAF-VGSISSGSLAD-----KLGCRRTFQIDT 161 (356)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~-~~~~~~g~l~d-----r~Grr~~~~~~~ 161 (356)
.++.+.++++|.-.+......|.+.++ -+. +-++.+...-+. +. -..+++.++.| |+||||..++-.
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~--sy~q~~~fSla~---~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~ 77 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKV--SYSQQAIFSLAS---YPFSLKLLWAPIVDSVYSKRIGRRKSWIIPI 77 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccCCC--ChhHheeeeeee---chhHHHHhhhhhhhhhcccccCCcchhhhHH
Confidence 345566777777777665567777777 444 333343322111 11 12345555555 789999876632
Q ss_pred -HHHHHHHHHHHHhh----------------------hH--HHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHH
Q 018408 162 -IPLILGAIISAQAH----------------------SL--DEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGT 216 (356)
Q Consensus 162 -~~~~i~~~~~~~~~----------------------~~--~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~ 216 (356)
.+.++..+..+..- +. ..+....++.-+..+--...+-...-.+..+++++.+..
T Consensus 78 Q~l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~AST 157 (544)
T PF13000_consen 78 QYLSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYAST 157 (544)
T ss_pred HHHHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHH
Confidence 33333333322111 01 112222223333333333333344455667788888888
Q ss_pred HhHHHHHHHHHHHHHhhhccC
Q 018408 217 LCQVGTCLGIITSLFLGIPAE 237 (356)
Q Consensus 217 ~~~~~~~~g~~~~~~i~~~l~ 237 (356)
-...+.++|.+++..+.-.+.
T Consensus 158 cqtvG~~~Gyfls~tvFlaln 178 (544)
T PF13000_consen 158 CQTVGQTAGYFLSFTVFLALN 178 (544)
T ss_pred HHHhHhhhhHHHHHHHHHhhC
Confidence 778888888888777655444
No 263
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.72 E-value=0.00039 Score=66.44 Aligned_cols=152 Identities=15% Similarity=0.166 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHhhhhcchhhHH-HHHHHhCCCCChhHHHHHHHHHHH-HHHHHHHhHHhhhhhh--chhHHHHHhH
Q 018408 86 FPHVLIASMSNFLFGYHIGVMNGPIV-SIAKELGFEGNPILEGLVVSIFIA-GAFVGSISSGSLADKL--GCRRTFQIDT 161 (356)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~--Grr~~~~~~~ 161 (356)
.+.++...++.....+....+.++.| ++..+|+. +++.++++..+..+ +.++|.+++|++..|+ +.|..+.+..
T Consensus 304 Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~--sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~ 381 (539)
T PF03137_consen 304 NPVFMCLILAGVFESFIVSGFATFLPKYLESQFGL--SASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCI 381 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHH
Confidence 34456666666666666666777776 45667888 44446666665544 6778999999999987 3344444443
Q ss_pred HHHHHHHHHHH---H--------h-------------------------------------------hhHHHHHHHHHHH
Q 018408 162 IPLILGAIISA---Q--------A-------------------------------------------HSLDEMLWGRFLV 187 (356)
Q Consensus 162 ~~~~i~~~~~~---~--------~-------------------------------------------~~~~~~~~~~~l~ 187 (356)
+...+..++.. + + +++..+++..++.
T Consensus 382 v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~ 461 (539)
T PF03137_consen 382 VVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFIL 461 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHH
Confidence 33333332210 0 0 0012233334444
Q ss_pred HhhhhhhhhHHHHHHHhhcCCCccchhHHHhH-HHHHHHHHHHHHhhhccCCC
Q 018408 188 GLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQ-VGTCLGIITSLFLGIPAEDD 239 (356)
Q Consensus 188 G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~-~~~~~g~~~~~~i~~~l~~~ 239 (356)
-+..+.........+-...|+++|+.++|+.. +...+|.+=+|++.|.+.|.
T Consensus 462 ~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 462 SFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp -----------------------------------------------------
T ss_pred HHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 44444555555556667888999999999964 55566888889998888875
No 264
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.63 E-value=0.011 Score=55.21 Aligned_cols=146 Identities=14% Similarity=0.063 Sum_probs=96.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHh----------hhHHHHHHHHHHHHhhh
Q 018408 122 NPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA----------HSLDEMLWGRFLVGLGI 191 (356)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~~~~l~G~~~ 191 (356)
++...+.+..+..++..+|..+.....-+..-|+++..+.++.++..+..... ++.+..+.--++..+..
T Consensus 253 s~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~ 332 (433)
T PF03092_consen 253 SPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIG 332 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHH
Confidence 66667777777777788888888777777778888887777766665543211 11122222345566666
Q ss_pred hhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCc-------hhHHHHHHhHHHHHHHHHHhhcc
Q 018408 192 GVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH-------WWRTMLYIASLPGFILALGMQFT 264 (356)
Q Consensus 192 g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~-------~w~~~~~~~~~~~~~~~~~~~~~ 264 (356)
+..+-....+++|+.|+..-|+..++.....++|..++..++..+.+..+ +-.+..+++.+..++.+....++
T Consensus 333 ~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~lL 412 (433)
T PF03092_consen 333 MIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFLL 412 (433)
T ss_pred HHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHHc
Confidence 66677777899999999999999998877777777777776665543221 12344445555555555556667
Q ss_pred cCC
Q 018408 265 VES 267 (356)
Q Consensus 265 ~e~ 267 (356)
|+.
T Consensus 413 p~~ 415 (433)
T PF03092_consen 413 PPQ 415 (433)
T ss_pred CCC
Confidence 765
No 265
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.59 E-value=0.0064 Score=56.55 Aligned_cols=74 Identities=8% Similarity=0.098 Sum_probs=59.0
Q ss_pred HHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHH
Q 018408 184 RFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILA 258 (356)
Q Consensus 184 ~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~ 258 (356)
-++.|++.-.......++-+|...++.++...++++....++..++|++........| .+++..+.+...++..
T Consensus 395 i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g-~~~v~~~~~~~~l~~~ 468 (488)
T KOG2325|consen 395 IVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSG-PRPVWIILLCLLLVVA 468 (488)
T ss_pred hheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcC-ccHHHHHHHHHHHHHH
Confidence 4456776666667778888999999999999999999999999999999888888777 7777776555444443
No 266
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=96.45 E-value=0.022 Score=55.97 Aligned_cols=80 Identities=8% Similarity=0.130 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHhhhhcchhhHHHH-HHHhCCCCChhHHHHHHHHHHH-HHHHHHHhHHhhhhhhc--hhHHHHHhHHHH
Q 018408 89 VLIASMSNFLFGYHIGVMNGPIVSI-AKELGFEGNPILEGLVVSIFIA-GAFVGSISSGSLADKLG--CRRTFQIDTIPL 164 (356)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~G--rr~~~~~~~~~~ 164 (356)
++...+..+........+..++|.+ .+.+|+ +..+.+++.+...+ +.+++.+++|+++||++ .|+.+.++.++.
T Consensus 332 f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~--s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~ 409 (633)
T TIGR00805 332 YMLVILAQVIDSLAFNGYITFLPKYLENQYGI--SSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLS 409 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--cHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHH
Confidence 3444444444444444455556644 556888 56668888877665 67899999999999998 456666666555
Q ss_pred HHHHHH
Q 018408 165 ILGAII 170 (356)
Q Consensus 165 ~i~~~~ 170 (356)
.++.++
T Consensus 410 ~~~~~~ 415 (633)
T TIGR00805 410 TLSYLL 415 (633)
T ss_pred HHHHHH
Confidence 555433
No 267
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.28 E-value=0.044 Score=51.09 Aligned_cols=88 Identities=9% Similarity=0.013 Sum_probs=46.5
Q ss_pred hHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHh---hh-ccCCC--Cc-hhHHHHH
Q 018408 176 SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFL---GI-PAEDD--PH-WWRTMLY 248 (356)
Q Consensus 176 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i---~~-~l~~~--~~-~w~~~~~ 248 (356)
.++..++.-++.|++.+........+.+ .+|++ .++.+..+.+++++++..+ .. ...+. .. +-...|.
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~----~~~a~~~G~g~aGv~~s~~~ii~~a~~~~~~~~~~~a~~YF~ 179 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPST----YSSAVMSGQGLAGVLTSLAMILVKASGNDSHGLKKSALGYFG 179 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH----HHHHHHhcchhHHHHHHHHHHHHHHhcCCccchhhhhhhHHH
Confidence 3455566677888888888887777765 56654 3333344444444333332 11 12221 11 1223344
Q ss_pred HhHHHHHHHHHHhhcccCCh
Q 018408 249 IASLPGFILALGMQFTVESP 268 (356)
Q Consensus 249 ~~~~~~~~~~~~~~~~~e~p 268 (356)
+++++.+++++.+..+++.|
T Consensus 180 ~a~~v~l~~i~~~~~l~k~~ 199 (437)
T TIGR00939 180 TPCVVQLICIVCYLLLPKLP 199 (437)
T ss_pred HHHHHHHHHHHHHHHHhcCH
Confidence 45555666666666677766
No 268
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.23 E-value=1 Score=41.90 Aligned_cols=168 Identities=7% Similarity=-0.129 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHH
Q 018408 90 LIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAI 169 (356)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 169 (356)
..++...+...++.-+.....+.+..+..- .+-...+...-.-.+..+++.+..|.+.||..|.+++..+.+..-++..
T Consensus 5 ~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p-~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~ 83 (432)
T PF06963_consen 5 WRLYLSHFLSTWGDRMWEFAVPLFLISIFP-GSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVA 83 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHH
Confidence 344555555555555555555555555521 1332244444455556677888889999999999987776554444333
Q ss_pred HHHH------h--h----hHHHH---HHHHHHHHhhhhhhh-hHHHHHHHhhcC------CCccchhHHHhHHHHHHHHH
Q 018408 170 ISAQ------A--H----SLDEM---LWGRFLVGLGIGVNT-VLVPIYISEVAP------TKYRGSLGTLCQVGTCLGII 227 (356)
Q Consensus 170 ~~~~------~--~----~~~~~---~~~~~l~G~~~g~~~-~~~~~~~~e~~p------~~~r~~~~~~~~~~~~~g~~ 227 (356)
+.+. . . +.+.. ++.-.+.|...-... ....+.=-||.. +..+.+.++...-.--+--+
T Consensus 84 ~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckl 163 (432)
T PF06963_consen 84 ASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKL 163 (432)
T ss_pred HHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHH
Confidence 2221 1 1 01111 111112221111111 111111123322 22233444444444455678
Q ss_pred HHHHhhhccCCCCchhHHHHHHhHHHHHHHHH
Q 018408 228 TSLFLGIPAEDDPHWWRTMLYIASLPGFILAL 259 (356)
Q Consensus 228 ~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~ 259 (356)
++|++.+.+.+..+ ......+.++..++..+
T Consensus 164 laPl~vG~l~t~~s-~~~~~~~i~~~N~~S~~ 194 (432)
T PF06963_consen 164 LAPLFVGLLMTFAS-PVIAAIFIAGWNLASVF 194 (432)
T ss_pred HHHHHHHHHhhccC-HHHHHHHHHHHHHHHHH
Confidence 89999998888666 66665555555555443
No 269
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.14 E-value=0.0055 Score=57.03 Aligned_cols=83 Identities=20% Similarity=0.334 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHH-hHHHHHHHH
Q 018408 90 LIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQI-DTIPLILGA 168 (356)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~-~~~~~~i~~ 168 (356)
+.+=+..+..+...+...+.++.+.+++|+ ++.+.|.+...--+..+++.+++|+++||+-+||.+++ ++++...+.
T Consensus 14 ~~~k~f~~~~~~~~g~l~pll~vy~kQLGl--~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~ 91 (618)
T KOG3762|consen 14 IVAKLFYLFFGARFGSLFPLLAVYFKQLGL--NPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTAT 91 (618)
T ss_pred heeeeeeeeeeecccccchHHHHHHHHcCC--CHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Confidence 333344444555666777888889999999 77789999999999999999999999999987776666 455555555
Q ss_pred HHHHHh
Q 018408 169 IISAQA 174 (356)
Q Consensus 169 ~~~~~~ 174 (356)
++..+.
T Consensus 92 fll~fv 97 (618)
T KOG3762|consen 92 FLLVFV 97 (618)
T ss_pred Hheeec
Confidence 555543
No 270
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.90 E-value=0.13 Score=48.05 Aligned_cols=108 Identities=11% Similarity=0.022 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhhhchh--HHHHH--hHHHHHHHHHHHHHh---------hhHHHHHHHHHHHHhhhh
Q 018408 126 EGLVVSIFIAGAFVGSISSGSLADKLGCR--RTFQI--DTIPLILGAIISAQA---------HSLDEMLWGRFLVGLGIG 192 (356)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr--~~~~~--~~~~~~i~~~~~~~~---------~~~~~~~~~~~l~G~~~g 192 (356)
.-+....+++|-.+|..+..+.. .-++| .+++. .-++.....+++..- ++-+..++..++.|+..|
T Consensus 309 ~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnG 387 (437)
T TIGR00939 309 PIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhh
Confidence 34556677777777777554321 11222 32222 222333333333222 345566777999999999
Q ss_pred hhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhh
Q 018408 193 VNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGI 234 (356)
Q Consensus 193 ~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~ 234 (356)
-..+....+..+..++++|-.+..+...+..+|..+|..++.
T Consensus 388 y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988888888888888888777643
No 271
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=95.59 E-value=0.022 Score=50.25 Aligned_cols=132 Identities=17% Similarity=0.124 Sum_probs=91.5
Q ss_pred HHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHH
Q 018408 137 AFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGT 216 (356)
Q Consensus 137 ~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~ 216 (356)
+.+.-++.=.+.|-.--|+++++-.+.......+..+.++.+.+=+.-++.|...+. ....++|+-+..+++++-+..+
T Consensus 55 YLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAa-EIAYysYIYs~Vd~~~Yqrvt~ 133 (433)
T KOG3810|consen 55 YLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAA-EIAYYSYIYSKVDPEMYKRVTG 133 (433)
T ss_pred HHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHH-HHhhhheeeeecCHHHHHHHHH
Confidence 444555555688888888888887777777777777888888877777777776644 3556777878888899999999
Q ss_pred HhHHHHHHHHHHHHHhhhccCCCCc-hhHHHHHHhHHHHHHHHHHhhcccCChH
Q 018408 217 LCQVGTCLGIITSLFLGIPAEDDPH-WWRTMLYIASLPGFILALGMQFTVESPR 269 (356)
Q Consensus 217 ~~~~~~~~g~~~~~~i~~~l~~~~~-~w~~~~~~~~~~~~~~~~~~~~~~e~p~ 269 (356)
......-.|-..|..++-.+..... ++...-++......+..+..+|+|..+|
T Consensus 134 y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~r 187 (433)
T KOG3810|consen 134 YCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKR 187 (433)
T ss_pred HhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCch
Confidence 8877777777777776666554322 1444444555555556666777777654
No 272
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=95.58 E-value=0.089 Score=46.13 Aligned_cols=97 Identities=14% Similarity=0.160 Sum_probs=63.0
Q ss_pred HHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCC--Ccc--
Q 018408 136 GAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPT--KYR-- 211 (356)
Q Consensus 136 ~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~--~~r-- 211 (356)
.-+..+++.+.+..++|-|.++.++........ ..-+-+.+..++..-...|++.+..++.--+|++++... +.|
T Consensus 70 ~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyi-A~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~~ 148 (390)
T KOG3097|consen 70 SLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYI-AANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRGE 148 (390)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH-HhhcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHhhhh
Confidence 344566666689999999999887766544432 111335677888889999999988877777776665532 334
Q ss_pred -------chhH----HHhHHHHHHHHHHHHHhh
Q 018408 212 -------GSLG----TLCQVGTCLGIITSLFLG 233 (356)
Q Consensus 212 -------~~~~----~~~~~~~~~g~~~~~~i~ 233 (356)
.+.. .+++...-+|..++..+.
T Consensus 149 q~~~~~~~~ffg~Ffii~~~~qv~gn~issli~ 181 (390)
T KOG3097|consen 149 QAGDGMKVRFFGEFFIIFQCAQVWGNLISSLIM 181 (390)
T ss_pred hccCceeeeehhHHHHHHHHHHHHHHHHHHHHH
Confidence 2333 445666666666655543
No 273
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.01 E-value=0.9 Score=41.75 Aligned_cols=95 Identities=5% Similarity=-0.081 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHH--hHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 018408 125 LEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQI--DTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYI 202 (356)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~ 202 (356)
-.|.+-++..+.+.++.+..|++..+..+..-+.+ ..++.+...++++..+|.+..+++-++.+.......+....-+
T Consensus 286 YNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qI 365 (412)
T PF01770_consen 286 YNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQI 365 (412)
T ss_pred cchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36777888888888899999998766666544443 3445555566677888999988888887777766666666666
Q ss_pred HhhcCCCccchhHHHhH
Q 018408 203 SEVAPTKYRGSLGTLCQ 219 (356)
Q Consensus 203 ~e~~p~~~r~~~~~~~~ 219 (356)
+.....+.-|..+|+..
T Consensus 366 A~~l~~e~yaLVFGiNt 382 (412)
T PF01770_consen 366 AKNLSEERYALVFGINT 382 (412)
T ss_pred HHhccccceeeeeeeHH
Confidence 66666665666666554
No 274
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.48 E-value=0.026 Score=50.11 Aligned_cols=107 Identities=15% Similarity=0.150 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHHHhHHhhhhhh-chhHHHHHh--HHHHHHHHHHHHH----------hhhHHHHHHHHHHHHhhhhhhh
Q 018408 129 VVSIFIAGAFVGSISSGSLADKL-GCRRTFQID--TIPLILGAIISAQ----------AHSLDEMLWGRFLVGLGIGVNT 195 (356)
Q Consensus 129 ~~~~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~--~~~~~i~~~~~~~----------~~~~~~~~~~~~l~G~~~g~~~ 195 (356)
....++++-.+|..+.++.--+. .+|..++.+ -++.....+++.. .++-+..++..++.|+..|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 45568888888888777542111 344433321 2222222222211 2344566777889999999999
Q ss_pred hHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhc
Q 018408 196 VLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIP 235 (356)
Q Consensus 196 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 235 (356)
+....+..+..++++|..+..+..++..+|..+|..++..
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp HHHH------------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888888888888888777766543
No 275
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=90.54 E-value=0.23 Score=45.71 Aligned_cols=129 Identities=10% Similarity=-0.078 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhc-
Q 018408 128 LVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVA- 206 (356)
Q Consensus 128 ~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~- 206 (356)
|=..++.+...+.+...-++.+|+|-|+.++.+...+.++..+.++.++.......+...|+-.+....+-+..++++.
T Consensus 336 ~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~ 415 (498)
T KOG0637|consen 336 LGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYAI 415 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHHH
Confidence 3344555666678888899999999777666666667777777777777777777777777544443333333322221
Q ss_pred --------------------CCCcc--chhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHH
Q 018408 207 --------------------PTKYR--GSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFI 256 (356)
Q Consensus 207 --------------------p~~~r--~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~ 256 (356)
....| |...|+.+....+..++.....|.+.+..|+-+.+-+..+..++.
T Consensus 416 ~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~~ 487 (498)
T KOG0637|consen 416 LGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVALL 487 (498)
T ss_pred hCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHHH
Confidence 11223 444455666666666666666666666555445554444444333
No 276
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=88.88 E-value=3.1 Score=38.13 Aligned_cols=108 Identities=19% Similarity=0.144 Sum_probs=68.6
Q ss_pred HHHHHHH-HHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHH-HH------HhhhHHHHHHHHHHHHhhhhhhhhH
Q 018408 126 EGLVVSI-FIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAII-SA------QAHSLDEMLWGRFLVGLGIGVNTVL 197 (356)
Q Consensus 126 ~~~~~~~-~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~-~~------~~~~~~~~~~~~~l~G~~~g~~~~~ 197 (356)
...+... +++.-.+|.+...++-+.=.|+.......=+..+..+. |- .-.+-+.+++...++|+..|=....
T Consensus 284 ~~~~~~l~fN~~d~vG~~~a~~~~~~~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYltsl 363 (406)
T KOG1479|consen 284 ALLLVFLSFNVFDLIGSILAALLTWPDPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTSL 363 (406)
T ss_pred HHHHHHHHhHHHHHhhhhhhhcccCCCCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhhh
Confidence 4445555 78888888666666554433332222222111111121 11 1345567788889999999888888
Q ss_pred HHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhh
Q 018408 198 VPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLG 233 (356)
Q Consensus 198 ~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~ 233 (356)
...+..+..|++++-.+..+..+....|...|..++
T Consensus 364 ~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 364 IMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred eehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 888888989888887777777777777777766653
No 277
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=87.73 E-value=14 Score=34.91 Aligned_cols=60 Identities=15% Similarity=0.019 Sum_probs=44.8
Q ss_pred HHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCC
Q 018408 181 LWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP 240 (356)
Q Consensus 181 ~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 240 (356)
++.-++..+.....+....++-+.+..+..=|+.|.+.+...++|+--...+.-.++|..
T Consensus 409 I~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~f 468 (544)
T PF13000_consen 409 IIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYF 468 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhc
Confidence 334566667777777888889999999999999999999988888755555554444443
No 278
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=87.56 E-value=7.8 Score=28.71 Aligned_cols=43 Identities=28% Similarity=0.352 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHH
Q 018408 125 LEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILG 167 (356)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~ 167 (356)
..+.......++..++..+.+.+.|..|.+..+.+...+..+.
T Consensus 88 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (141)
T TIGR00880 88 ALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAA 130 (141)
T ss_pred HHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHH
Confidence 3566677777888888888888888888766655544443333
No 279
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=87.47 E-value=3.7 Score=40.66 Aligned_cols=79 Identities=13% Similarity=0.204 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHhhhhcchhhHHH-HHHHhCCCCChhHHHHHHHHHHH-HHHHHHHhHHhhhhhh--chhHHHHHhHHHH
Q 018408 89 VLIASMSNFLFGYHIGVMNGPIVS-IAKELGFEGNPILEGLVVSIFIA-GAFVGSISSGSLADKL--GCRRTFQIDTIPL 164 (356)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~--Grr~~~~~~~~~~ 164 (356)
.+...++..+..+....+.+++|. +.++||. +++.+..+.....+ +.++|.+++|++..|+ +.|....+.++..
T Consensus 394 f~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~--sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~ 471 (735)
T KOG3626|consen 394 FMLVVLASVIESLAITGYITFLPKYLETQFGI--SASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCS 471 (735)
T ss_pred HHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCC--CHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHH
Confidence 555666666676777777777774 4567888 55556676655544 4578899999999986 4444444444444
Q ss_pred HHHHH
Q 018408 165 ILGAI 169 (356)
Q Consensus 165 ~i~~~ 169 (356)
.+..+
T Consensus 472 ~l~l~ 476 (735)
T KOG3626|consen 472 VLSLL 476 (735)
T ss_pred HHHHH
Confidence 44333
No 280
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=87.08 E-value=3.5 Score=36.27 Aligned_cols=75 Identities=16% Similarity=0.061 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhcc
Q 018408 162 IPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPA 236 (356)
Q Consensus 162 ~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 236 (356)
++..+.-.+..+.++++..++..+.-|+..|..+.-..--+.+-.++++|-.+|+...++-.+|..++.+++-.+
T Consensus 327 l~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 327 LLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 333444445567788888888889999988888888877778778889999999999999999999988887654
No 281
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=86.68 E-value=17 Score=30.11 Aligned_cols=39 Identities=15% Similarity=0.159 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHhHHhhh---hhhchhHHHHHhHHHHHHHH
Q 018408 130 VSIFIAGAFVGSISSGSLA---DKLGCRRTFQIDTIPLILGA 168 (356)
Q Consensus 130 ~~~~~~~~~~~~~~~g~l~---dr~Grr~~~~~~~~~~~i~~ 168 (356)
.....+++.+|..+++.+. .+..+|+.....+.+..+..
T Consensus 52 ~~~~i~~F~~G~~~~~~i~~~~~~~~~~~~~~~~l~~~~~ll 93 (209)
T PF06912_consen 52 YLLAILSFILGAFLAGLIVRRSRRRRRRRWYRILLLLEAILL 93 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH
Confidence 3444555667777777772 23334444444443333333
No 282
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=86.53 E-value=24 Score=31.80 Aligned_cols=95 Identities=18% Similarity=0.209 Sum_probs=59.3
Q ss_pred hHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHH-------HHHHH--hhhHHH
Q 018408 109 PIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGA-------IISAQ--AHSLDE 179 (356)
Q Consensus 109 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~-------~~~~~--~~~~~~ 179 (356)
.+..+...+.= ..-.+.+.+.+.|...+.+|+...-++.|.--.-+.+..-.++..++. +.++. .++-+.
T Consensus 29 al~tLatyLlG-~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~V 107 (508)
T COG4262 29 ALGTLATYLLG-GGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLV 107 (508)
T ss_pred HHHHHHHHhcC-CceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHH
Confidence 34444555421 144567888999999999999988888775433333322222222221 11221 245667
Q ss_pred HHHHHHHHHhhhhhhhhHHHHHHHh
Q 018408 180 MLWGRFLVGLGIGVNTVLVPIYISE 204 (356)
Q Consensus 180 ~~~~~~l~G~~~g~~~~~~~~~~~e 204 (356)
++++-+++|.-.|.-.|..+.++..
T Consensus 108 ly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 108 LYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHH
Confidence 7888899999999998988887765
No 283
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=86.50 E-value=8.6 Score=32.95 Aligned_cols=101 Identities=14% Similarity=0.134 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhhh-hchhHHHHH----hHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHhhhhhhhh
Q 018408 127 GLVVSIFIAGAFVGSISSGSLADK-LGCRRTFQI----DTIPLILGAIISAQA-----HSLDEMLWGRFLVGLGIGVNTV 196 (356)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~~~~----~~~~~~i~~~~~~~~-----~~~~~~~~~~~l~G~~~g~~~~ 196 (356)
.....++..|..+|.+..|.+... +-||+.+.. +.++.++..++.+.. .+...+++.-++.|++.=+.++
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 445566677777787777777764 455554432 233344433332111 1355677778888887655566
Q ss_pred HHHHHHHhhcCCCccchhHHHhHHHHHHHHHH
Q 018408 197 LVPIYISEVAPTKYRGSLGTLCQVGTCLGIIT 228 (356)
Q Consensus 197 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 228 (356)
+....-.|. +...+-+..-.+...+.+|.++
T Consensus 224 ViL~lPhEy-K~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 224 VILNLPHEY-KGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred HHhcChhhh-cCCCcceehhHHHHHHHHHHHH
Confidence 555444443 2222222222344455555443
No 284
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=85.26 E-value=24 Score=30.66 Aligned_cols=133 Identities=19% Similarity=0.210 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhhhchh--HHHHHhHHHHHHHHHHHHHh----h---hHHHHHHHHHHHHhhhhhhhh
Q 018408 126 EGLVVSIFIAGAFVGSISSGSLADKLGCR--RTFQIDTIPLILGAIISAQA----H---SLDEMLWGRFLVGLGIGVNTV 196 (356)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr--~~~~~~~~~~~i~~~~~~~~----~---~~~~~~~~~~l~G~~~g~~~~ 196 (356)
-|.+.+.+.+...+|+-+..++..|-..| ..+.+..++.+....+.... + +...-+++..+.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 57888888888888888877777665443 33444444433333322221 1 222335566667777888999
Q ss_pred HHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHH
Q 018408 197 LVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILAL 259 (356)
Q Consensus 197 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~ 259 (356)
...-+-.++.|.+.|+..+.++..-..+-..++-.. -...+...+-|..|-++.+...++.+
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLyn-lh~~~~p~~tr~mf~icS~~~~~a~i 425 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYN-LHVDAFPTTTRNMFGICSAFLFVASI 425 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhhee-cccccCccccchhhhhhHHHHHHHHH
Confidence 999999999999999999988755444333222111 00111111256677777666655543
No 285
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=84.70 E-value=15 Score=34.75 Aligned_cols=95 Identities=8% Similarity=-0.083 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhhhchh--HHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 018408 126 EGLVVSIFIAGAFVGSISSGSLADKLGCR--RTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYIS 203 (356)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~ 203 (356)
.|..-++..+..+++.+..|++-.+..+. ..+.+..++.+...++++..+|.+..+++.++.+.......+....-++
T Consensus 300 NG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA 379 (511)
T TIGR00806 300 NGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIA 379 (511)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556666677788889999886666442 3333344555555666777889999999999998888888888888888
Q ss_pred hhcCCCccchhHHHhHH
Q 018408 204 EVAPTKYRGSLGTLCQV 220 (356)
Q Consensus 204 e~~p~~~r~~~~~~~~~ 220 (356)
.....+.-|...|+.++
T Consensus 380 ~~L~~~~~aLvFGiNtf 396 (511)
T TIGR00806 380 SSLSKELCALVFGINTF 396 (511)
T ss_pred HHhcccceEEEEecHHH
Confidence 87777766888877654
No 286
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=82.79 E-value=6.8 Score=28.21 Aligned_cols=26 Identities=23% Similarity=0.166 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHhHHhhhhhh-chhHH
Q 018408 131 SIFIAGAFVGSISSGSLADKL-GCRRT 156 (356)
Q Consensus 131 ~~~~~~~~~~~~~~g~l~dr~-Grr~~ 156 (356)
+.-+++.++-....||+.||| |-++.
T Consensus 49 ssefIsGilVGa~iG~llD~~agTsPw 75 (116)
T COG5336 49 SSEFISGILVGAGIGWLLDKFAGTSPW 75 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcH
Confidence 334445555556678999986 44433
No 287
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=82.23 E-value=46 Score=31.55 Aligned_cols=71 Identities=15% Similarity=0.082 Sum_probs=49.7
Q ss_pred HHHHHhhhhhhhhHHHHHHHhhcCC-CccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHH
Q 018408 184 RFLVGLGIGVNTVLVPIYISEVAPT-KYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGF 255 (356)
Q Consensus 184 ~~l~G~~~g~~~~~~~~~~~e~~p~-~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~ 255 (356)
-++.|+........--..+.+.+|. ++|...+|-++...++..++..++++.+....| |.....+.-++.+
T Consensus 273 vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~G-w~~~a~i~Pii~l 344 (472)
T TIGR00769 273 VIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYG-WLTAALITPLVML 344 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHH
Confidence 3445566666666666777888875 568888888888888888777777777878777 8876655433333
No 288
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=79.01 E-value=19 Score=28.05 Aligned_cols=51 Identities=18% Similarity=0.096 Sum_probs=33.7
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHH
Q 018408 175 HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIIT 228 (356)
Q Consensus 175 ~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 228 (356)
+++..+++...++|++. ..+.|..++--..+++-|..+|+-.+-.+++-+.
T Consensus 95 P~~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CchHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 44555555555555543 3445556677777888999999988877776654
No 289
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=78.28 E-value=1.8 Score=37.00 Aligned_cols=56 Identities=20% Similarity=0.125 Sum_probs=34.9
Q ss_pred CccchhHHHhHHHHHHHHHHHHHhhhccCC----CCchhHHHHHHhHHHHHHHHHHhhcc
Q 018408 209 KYRGSLGTLCQVGTCLGIITSLFLGIPAED----DPHWWRTMLYIASLPGFILALGMQFT 264 (356)
Q Consensus 209 ~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~----~~~~w~~~~~~~~~~~~~~~~~~~~~ 264 (356)
++|+....+...++++|+++.....-...+ ...+|++++.+.+++.++-++++.++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456777777777888888776554222211 11239999888877776665555443
No 290
>PRK10263 DNA translocase FtsK; Provisional
Probab=77.13 E-value=16 Score=38.73 Aligned_cols=21 Identities=19% Similarity=0.208 Sum_probs=12.0
Q ss_pred HHHHHHHHHHhHHhhhhhhch
Q 018408 133 FIAGAFVGSISSGSLADKLGC 153 (356)
Q Consensus 133 ~~~~~~~~~~~~g~l~dr~Gr 153 (356)
-+.++.+|..+...+..-||-
T Consensus 61 ~Nl~GiVGA~LAD~L~~LFGl 81 (1355)
T PRK10263 61 HNLGGMPGAWLADTLFFIFGV 81 (1355)
T ss_pred ccccchHHHHHHHHHHHHHhH
Confidence 445555666666655555663
No 291
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=76.06 E-value=7.4 Score=33.30 Aligned_cols=23 Identities=13% Similarity=0.073 Sum_probs=13.4
Q ss_pred hHHHHHHhHHHHHHHHHHhhccc
Q 018408 243 WRTMLYIASLPGFILALGMQFTV 265 (356)
Q Consensus 243 w~~~~~~~~~~~~~~~~~~~~~~ 265 (356)
..+.-++++++.++..+.+.+++
T Consensus 114 ~~~Ln~~G~~l~~~~~~~f~fik 136 (254)
T PF07857_consen 114 SPWLNYIGVALVLVSGIIFSFIK 136 (254)
T ss_pred hhHHHHHHHHHHHHHHHheeeec
Confidence 44555566666666666655554
No 292
>COG1422 Predicted membrane protein [Function unknown]
Probab=74.54 E-value=31 Score=28.12 Aligned_cols=12 Identities=17% Similarity=0.301 Sum_probs=5.8
Q ss_pred HHHHHHHHHhhh
Q 018408 223 CLGIITSLFLGI 234 (356)
Q Consensus 223 ~~g~~~~~~i~~ 234 (356)
.+...++|.+..
T Consensus 32 ~ln~~f~P~i~~ 43 (201)
T COG1422 32 ALNVVFGPLLSP 43 (201)
T ss_pred HHHHHHhhhccc
Confidence 344455555543
No 293
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=73.61 E-value=1.1 Score=39.87 Aligned_cols=79 Identities=20% Similarity=0.123 Sum_probs=0.0
Q ss_pred HHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhh---hccCCCCc-hhHHHHHHhHHHHHHHHHH
Q 018408 185 FLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLG---IPAEDDPH-WWRTMLYIASLPGFILALG 260 (356)
Q Consensus 185 ~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~---~~l~~~~~-~w~~~~~~~~~~~~~~~~~ 260 (356)
++.|++.+..+.....+.+. +|++.. .....+.++++.+..++. ....+... +-...|.++.++.+++++.
T Consensus 5 ~~~~~~~~~~q~s~~glas~-~p~~y~----~a~~~Gq~~aGv~~s~l~ii~~~~~~~~~~~a~~yF~~a~~i~i~~~~~ 79 (309)
T PF01733_consen 5 ALIGFANAVLQSSLFGLASL-FPPKYT----QAVMIGQGLAGVIVSLLRIITKASGSDVKTSAFIYFIIAVLIVILCIIL 79 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEHhhhHHHhccHHHHHhc-CCHHHH----HHHHhhccHHHHHHHHHHHHHHHhhhccchhhhhHHHHHHHHHHHHHHH
Confidence 45666666666766666664 565432 233334444444433322 11211111 1223344445555555555
Q ss_pred hhcccCCh
Q 018408 261 MQFTVESP 268 (356)
Q Consensus 261 ~~~~~e~p 268 (356)
++.+++.|
T Consensus 80 ~~~l~~~~ 87 (309)
T PF01733_consen 80 YFILPRSP 87 (309)
T ss_dssp --------
T ss_pred HHHhccCh
Confidence 66666655
No 294
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=72.10 E-value=94 Score=29.72 Aligned_cols=65 Identities=18% Similarity=0.196 Sum_probs=44.3
Q ss_pred HHHHhhhhhhhhHHHHHHHhhcCC-CccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHh
Q 018408 185 FLVGLGIGVNTVLVPIYISEVAPT-KYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIA 250 (356)
Q Consensus 185 ~l~G~~~g~~~~~~~~~~~e~~p~-~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~ 250 (356)
+..|+........--..+.+.+|. +.+...+|-++...++-..+..++++.+....| |+....+.
T Consensus 290 i~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~G-W~~~Alit 355 (491)
T PF03219_consen 290 IAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFG-WRTAALIT 355 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHh
Confidence 445555555666666677788875 446777777776666666666677788888878 88766653
No 295
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=71.22 E-value=47 Score=30.16 Aligned_cols=110 Identities=13% Similarity=0.071 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhhhchhHHH--HHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 018408 126 EGLVVSIFIAGAFVGSISSGSLADKLGCRRTF--QIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYIS 203 (356)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~ 203 (356)
.|..-++..+.++++.+..|.+--+..|..-+ .++.+..+-..++++.+.+++..+++..+.+.......++...-++
T Consensus 273 NG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA 352 (433)
T KOG3810|consen 273 NGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIA 352 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHH
Confidence 34555666677788889999988777666433 3344555555556666778888888877777777666677777777
Q ss_pred hhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCC
Q 018408 204 EVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAED 238 (356)
Q Consensus 204 e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 238 (356)
+....+.-|..+|+..+. +-++-.++.....|
T Consensus 353 ~nL~~e~~gLvFGiNTFv---Al~lQsilT~iVvd 384 (433)
T KOG3810|consen 353 RNLSSELFGLVFGINTFV---ALILQSILTLIVVD 384 (433)
T ss_pred HhhhhhhheeeeehHHHH---HHHHHHhheEEEEc
Confidence 777777677777765432 33333444444444
No 296
>COG4792 EscU Type III secretory pathway, component EscU [Intracellular trafficking and secretion]
Probab=70.81 E-value=73 Score=27.90 Aligned_cols=56 Identities=11% Similarity=0.135 Sum_probs=33.5
Q ss_pred cCCHHHHHHHHHHHcCCcchHHHHHHHHHHHHhcCCC-CccchhhhcccCcchhhHH
Q 018408 274 GGMLNDAKAVIANLWGESEINKAIEEFQLVIKKDGSD-LDSQWSELLEEPHSRVAFI 329 (356)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~ 329 (356)
+-..+|.+++.+...++.+...+..+++.+.+...-. +-..-.-+++||.=...++
T Consensus 215 kMSKdEVkRE~Kd~eG~PeiKskRRq~~~Eiqsgsl~~nVkrStviv~nPThiaI~l 271 (349)
T COG4792 215 KMSKDEVKREYKDMEGDPEIKSKRRQLHSEIQSGSLANNVKRSTVIVKNPTHIAICL 271 (349)
T ss_pred ccCHHHHHHHHhcccCCchhhHHHHHHHHHHhcCChhhccceeeEEEecCceEEEEE
Confidence 4456788888888888887777777777766553221 1112223567775443333
No 297
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=67.39 E-value=84 Score=30.71 Aligned_cols=79 Identities=18% Similarity=0.089 Sum_probs=60.1
Q ss_pred HHhHHHHHHHHHHHHHh-----------------hhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHH
Q 018408 158 QIDTIPLILGAIISAQA-----------------HSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQV 220 (356)
Q Consensus 158 ~~~~~~~~i~~~~~~~~-----------------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~ 220 (356)
-+|+++..+.+...+.. -+..+++--.+++|++.........-+.-+-+|++.|+.+++++.+
T Consensus 422 g~G~~~si~sm~~aa~vE~krl~~~~~~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~ 501 (571)
T KOG1237|consen 422 GIGLVLSILSMAVAGIVEAKRLKTAVSLLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLL 501 (571)
T ss_pred eccchHHHHHHHHHHHHHHHHhhhhhhccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHH
Confidence 44566666665555542 1344555667889999988888888888888999999999999999
Q ss_pred HHHHHHHHHHHhhhcc
Q 018408 221 GTCLGIITSLFLGIPA 236 (356)
Q Consensus 221 ~~~~g~~~~~~i~~~l 236 (356)
...+|..+...+....
T Consensus 502 t~a~G~~lss~Lv~~v 517 (571)
T KOG1237|consen 502 TVAVGNYLSSVLVSLV 517 (571)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999988877443
No 298
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=67.34 E-value=42 Score=26.12 Aligned_cols=26 Identities=23% Similarity=0.350 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHhHHhhhhhhchhH
Q 018408 130 VSIFIAGAFVGSISSGSLADKLGCRR 155 (356)
Q Consensus 130 ~~~~~~~~~~~~~~~g~l~dr~Grr~ 155 (356)
+.-|.+|+.+...+.|++.+|..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccc
Confidence 34577888899999999999988764
No 299
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=63.74 E-value=1.2e+02 Score=30.53 Aligned_cols=50 Identities=12% Similarity=0.031 Sum_probs=32.0
Q ss_pred Hhhhhh----hchhHHHHHhHHHHHHHHHHHHHhh-hHHHHHHHHHHHHhhhhhh
Q 018408 145 GSLADK----LGCRRTFQIDTIPLILGAIISAQAH-SLDEMLWGRFLVGLGIGVN 194 (356)
Q Consensus 145 g~l~dr----~Grr~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~l~G~~~g~~ 194 (356)
+-++|. -||.+-++++.++++++.+...+.. ..+.+..+.++.+++.++.
T Consensus 44 ~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~ml 98 (704)
T TIGR01666 44 AALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIML 98 (704)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 446664 4777778888888888877766554 4455555565665555443
No 300
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=63.61 E-value=62 Score=28.29 Aligned_cols=36 Identities=8% Similarity=-0.014 Sum_probs=17.1
Q ss_pred HhHHHHHHHHHHHHHh-hhHHHHHHHHHHHHhhhhhh
Q 018408 159 IDTIPLILGAIISAQA-HSLDEMLWGRFLVGLGIGVN 194 (356)
Q Consensus 159 ~~~~~~~i~~~~~~~~-~~~~~~~~~~~l~G~~~g~~ 194 (356)
.+.+++++..++..+. ++.+.+.+..++.+++.++.
T Consensus 4 ~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml 40 (284)
T PF12805_consen 4 ATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGML 40 (284)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 3444444444444443 34445555555555555443
No 301
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=62.11 E-value=52 Score=26.67 Aligned_cols=24 Identities=21% Similarity=0.361 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHhHHhhhhhhch
Q 018408 130 VSIFIAGAFVGSISSGSLADKLGC 153 (356)
Q Consensus 130 ~~~~~~~~~~~~~~~g~l~dr~Gr 153 (356)
+.-|.+++.++..+.|+++||.-+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 445778899999999999999875
No 302
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=61.61 E-value=1.1e+02 Score=26.85 Aligned_cols=80 Identities=16% Similarity=0.200 Sum_probs=36.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHhHHhhhhh---hchhHHHHHh
Q 018408 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELGFEGNPILEGLVVSIFIAGAFVGSISSGSLADK---LGCRRTFQID 160 (356)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr---~Grr~~~~~~ 160 (356)
|+....+.+.+++++.-+..+.....+..+.+..++- ++ ..++..+ .+...+...-.++ ||.||.=+++
T Consensus 22 r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml-~D-~~al~la------l~A~~~a~r~~~~~~TfGy~R~eiLa 93 (296)
T COG1230 22 RRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHML-SD-ALALLLA------LIAIKLARRPATKRFTFGYKRLEILA 93 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHHH-HH-HHHHHHH------HHHHHHhcCCCCCCCCccHhHHHHHH
Confidence 3444455555555554444444444444556655542 11 1222222 1222222223332 6777766666
Q ss_pred HHHHHHHHHHH
Q 018408 161 TIPLILGAIIS 171 (356)
Q Consensus 161 ~~~~~i~~~~~ 171 (356)
.+..++..+..
T Consensus 94 a~~nav~Li~~ 104 (296)
T COG1230 94 AFLNALLLIVV 104 (296)
T ss_pred HHHHHHHHHHH
Confidence 55555544443
No 303
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=61.04 E-value=1.9e+02 Score=29.17 Aligned_cols=51 Identities=12% Similarity=0.049 Sum_probs=33.0
Q ss_pred HHhhhhh----hchhHHHHHhHHHHHHHHHHHHHhh-hHHHHHHHHHHHHhhhhhh
Q 018408 144 SGSLADK----LGCRRTFQIDTIPLILGAIISAQAH-SLDEMLWGRFLVGLGIGVN 194 (356)
Q Consensus 144 ~g~l~dr----~Grr~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~l~G~~~g~~ 194 (356)
.+-+.|. -||.+-++++.++++++.+...+.. ..+.+..+.++.+++.++.
T Consensus 43 a~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~ml 98 (701)
T TIGR01667 43 AAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILL 98 (701)
T ss_pred hhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 3345654 3677888888888888888777654 4445555566666655544
No 304
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=60.25 E-value=7.4 Score=34.36 Aligned_cols=122 Identities=14% Similarity=0.092 Sum_probs=68.1
Q ss_pred HHHHHHHHHhHHhhhhhh--chhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCcc
Q 018408 134 IAGAFVGSISSGSLADKL--GCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYR 211 (356)
Q Consensus 134 ~~~~~~~~~~~g~l~dr~--Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r 211 (356)
.+-..+-.+....+.||+ |.|. .+..++.+.+..+.+++++.++-+.+..+..++.|........+.+ .+|+.
T Consensus 72 ilPsL~iKl~~Pff~~rfpf~~Ri--~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss-~Y~~~-- 146 (409)
T KOG3880|consen 72 ILPSLAIKLTAPFFIHRFPFGFRI--ALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSS-RYPSI-- 146 (409)
T ss_pred hhHHHHHHHhchhhhhhcccchHH--HHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhc-cCCCc--
Confidence 333455566677788875 5554 3455667777778888898888888888888888776555554433 33332
Q ss_pred chhHHHhHHHHHHHHHHHHHhhhccCC--CCchhHHHHHHhHHHHHHHHHHhhc
Q 018408 212 GSLGTLCQVGTCLGIITSLFLGIPAED--DPHWWRTMLYIASLPGFILALGMQF 263 (356)
Q Consensus 212 ~~~~~~~~~~~~~g~~~~~~i~~~l~~--~~~~w~~~~~~~~~~~~~~~~~~~~ 263 (356)
..+-+..+...++.+|..--..+.+ ... -+-..++...+.++.++.+++
T Consensus 147 --~i~~WSSGTGgAGliGa~SYa~lT~~~~~s-pk~Tlli~l~lP~lfa~~yf~ 197 (409)
T KOG3880|consen 147 --VIAGWSSGTGGAGLIGASSYAFLTSWANLS-PKSTLLIMLFLPALFAFAYFF 197 (409)
T ss_pred --eeccccCCCCcchhhhhhHHHHHhhhcCCC-hhhHHHHHHHHHHHHHHHHHh
Confidence 2222333333334444333223333 122 455566655554444444444
No 305
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=59.46 E-value=56 Score=32.53 Aligned_cols=60 Identities=12% Similarity=0.053 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccC
Q 018408 178 DEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAE 237 (356)
Q Consensus 178 ~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 237 (356)
++.+.-.++.+.+.........-+...-.|++.|....+++.+...+|..+...+..+-.
T Consensus 566 ~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~~~ 625 (654)
T TIGR00926 566 LWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAEFEN 625 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 334444556666666665555556667789999999999999999999999888776543
No 306
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=59.29 E-value=1.5e+02 Score=27.40 Aligned_cols=39 Identities=15% Similarity=0.107 Sum_probs=27.4
Q ss_pred HHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHH
Q 018408 134 IAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISA 172 (356)
Q Consensus 134 ~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~ 172 (356)
.....+..++.|...|+..|+|++...+.+.-++.+.++
T Consensus 73 sgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vag 111 (503)
T KOG2601|consen 73 SGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAG 111 (503)
T ss_pred HhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHH
Confidence 334456667778889999999998887766555554443
No 307
>COG1288 Predicted membrane protein [Function unknown]
Probab=56.86 E-value=1.7e+02 Score=27.35 Aligned_cols=98 Identities=17% Similarity=0.168 Sum_probs=42.9
Q ss_pred hHHHHHHHHHHHHHhhhH--HHHHHHHHHHHhhh------hhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHH
Q 018408 160 DTIPLILGAIISAQAHSL--DEMLWGRFLVGLGI------GVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLF 231 (356)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~--~~~~~~~~l~G~~~------g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~ 231 (356)
-.++.....++..+.... ..+++...+.++.. +.......+=++|..... |..+..-++.+..+-.++.|.
T Consensus 360 dTiL~~~~~~lsgls~~~f~i~mli~~~~l~f~VpS~SG~A~ltMPImAPLaD~vgv~-RqvvV~Afq~g~G~~n~I~PT 438 (481)
T COG1288 360 DTILNYLASLLSGLSSAVFAIGMLIFQALLNFFVPSGSGLAVLTMPIMAPLADLVGVP-RQVVVLAFQLGDGFSNIIAPT 438 (481)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHheEEEeCCCchhHhhchhhhhhHHhcCCC-HHHhhhhhhhcchhhheecCc
Confidence 344444444444444332 23344455555432 222222233345655443 555555555555554444443
Q ss_pred -------hhhccCCCCchhHHHHHHhHHHHHHHH
Q 018408 232 -------LGIPAEDDPHWWRTMLYIASLPGFILA 258 (356)
Q Consensus 232 -------i~~~l~~~~~~w~~~~~~~~~~~~~~~ 258 (356)
++..=.+...||++..-..++..++..
T Consensus 439 Sg~~ma~La~~~i~y~~W~Kfv~pl~~i~~li~~ 472 (481)
T COG1288 439 SGLLMATLAMARVPYGTWLKFVAPLLGILFLISS 472 (481)
T ss_pred hHHHHHHHHHccCChhHHHHHHHHHHHHHHHHHH
Confidence 222222333445655555444444443
No 308
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=51.48 E-value=12 Score=31.23 Aligned_cols=49 Identities=14% Similarity=0.183 Sum_probs=32.3
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHH
Q 018408 182 WGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLF 231 (356)
Q Consensus 182 ~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~ 231 (356)
..-.-.|+|.|..++....-+.+.+| +......++......+....|-.
T Consensus 176 ALAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y 224 (241)
T PF11299_consen 176 ALAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLY 224 (241)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHH
Confidence 34455788888888888888888887 44556666655555554444433
No 309
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=48.22 E-value=2.2e+02 Score=26.08 Aligned_cols=34 Identities=9% Similarity=0.042 Sum_probs=17.7
Q ss_pred HhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhc
Q 018408 173 QAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVA 206 (356)
Q Consensus 173 ~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~ 206 (356)
+.+|+.....--.+..+..-...+..+.++.|.+
T Consensus 230 ~gNsF~v~~~~~v~~ai~~F~vl~ii~~i~~E~~ 263 (374)
T PF01528_consen 230 IGNSFYVSVSDMVFGAINVFAVLSIIYLIVIEVV 263 (374)
T ss_pred HhcceeeeHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455544443344444444445566666666665
No 310
>PRK10692 hypothetical protein; Provisional
Probab=47.53 E-value=65 Score=22.27 Aligned_cols=19 Identities=11% Similarity=0.242 Sum_probs=11.0
Q ss_pred hhHHHHHhHHHHHHHHHHH
Q 018408 153 CRRTFQIDTIPLILGAIIS 171 (356)
Q Consensus 153 rr~~~~~~~~~~~i~~~~~ 171 (356)
||...++|.++++++.+.+
T Consensus 3 Rk~a~~~GN~lMglGmv~M 21 (92)
T PRK10692 3 RKNASLLGNVLMGLGLVVM 21 (92)
T ss_pred chhhHHHhhHHHHHHHHHH
Confidence 5556666666666655443
No 311
>COG3619 Predicted membrane protein [Function unknown]
Probab=47.29 E-value=1.7e+02 Score=24.61 Aligned_cols=31 Identities=6% Similarity=0.068 Sum_probs=18.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHhHHhhhhhhch
Q 018408 123 PILEGLVVSIFIAGAFVGSISSGSLADKLGC 153 (356)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr 153 (356)
+...........+..++|......+..|..|
T Consensus 54 ~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 54 DAALAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4445555666666677776655555555554
No 312
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=45.43 E-value=17 Score=26.92 Aligned_cols=12 Identities=8% Similarity=-0.205 Sum_probs=7.3
Q ss_pred HHHhhcccCChH
Q 018408 258 ALGMQFTVESPR 269 (356)
Q Consensus 258 ~~~~~~~~e~p~ 269 (356)
+++++++|+.|.
T Consensus 57 i~l~~~lp~~P~ 68 (118)
T PRK10697 57 IILSFALDPMPD 68 (118)
T ss_pred HHHHHhccCCcc
Confidence 345566787764
No 313
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=44.46 E-value=81 Score=19.97 Aligned_cols=25 Identities=24% Similarity=0.232 Sum_probs=16.1
Q ss_pred hHHHHHHhHHHHHHHHHHhhcccCC
Q 018408 243 WRTMLYIASLPGFILALGMQFTVES 267 (356)
Q Consensus 243 w~~~~~~~~~~~~~~~~~~~~~~e~ 267 (356)
+....+++.+..++..++...+|++
T Consensus 31 ~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 31 FTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 6666677777777666655555554
No 314
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=44.43 E-value=1.1e+02 Score=21.32 Aligned_cols=69 Identities=17% Similarity=0.163 Sum_probs=38.4
Q ss_pred HhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHHHHHHH
Q 018408 188 GLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGFILALG 260 (356)
Q Consensus 188 G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~ 260 (356)
|++=-...+..+.++.|..=. ....+.......+|..+|.+....+..+.. .+..+..+.+.+++..+.
T Consensus 5 GigRFayTplLP~M~~~~~ls---~~~ag~lasaNy~GYL~GAl~~~~~~~~~~-~~~~~~~~l~~~~~~~~~ 73 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQADGGLS---LSQAGWLASANYLGYLVGALLASRLPRHSR-PRRLLRAGLLLTVLSTAA 73 (85)
T ss_pred hhHHHHHHhHhHHHHHhcCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHH
Confidence 333334556666666664322 334455667777777777777776665544 445555555554444433
No 315
>TIGR02235 menA_cyano-plnt 1,4-dihydroxy-2-naphthoate phytyltransferase. This family of phytyltransferases, found in plants and cyanobacteria, are involved in the biosythesis of phylloquinone (Vitamin K1). Phylloquinone is a critical component of photosystem I. The closely related MenA enzyme from bacteria transfers a prenyl group (which only differs in the saturation of the isoprenyl groups) in the biosynthesis of menaquinone. Activity towards both substrates in certain organisms should be considered a possibility.
Probab=43.87 E-value=1.8e+02 Score=25.52 Aligned_cols=8 Identities=25% Similarity=0.343 Sum_probs=4.6
Q ss_pred cCCCccch
Q 018408 206 APTKYRGS 213 (356)
Q Consensus 206 ~p~~~r~~ 213 (356)
+|-+.||.
T Consensus 127 ~~l~y~gL 134 (285)
T TIGR02235 127 FRLGYQGL 134 (285)
T ss_pred cccCCCCc
Confidence 45566664
No 316
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=41.75 E-value=2.4e+02 Score=26.26 Aligned_cols=58 Identities=12% Similarity=-0.053 Sum_probs=46.0
Q ss_pred HHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCCc
Q 018408 184 RFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDPH 241 (356)
Q Consensus 184 ~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~ 241 (356)
..+.+......+...+++.+.+.++..-|+.|++.+...++|+-.-..+...+.|..+
T Consensus 376 y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 376 YAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLT 433 (510)
T ss_pred HHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCc
Confidence 4555555555667778899999999999999999999999998777777777776554
No 317
>COG4769 Predicted membrane protein [Function unknown]
Probab=39.84 E-value=1.2e+02 Score=24.05 Aligned_cols=52 Identities=15% Similarity=0.128 Sum_probs=32.4
Q ss_pred HHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 018408 133 FIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLG 190 (356)
Q Consensus 133 ~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~ 190 (356)
+.+.+.+.+...-++..++|.|..=.+|.. ..-++.+|..++++++++.+-.
T Consensus 82 ~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS------~mGaF~hNl~QLivas~Lv~~~ 133 (181)
T COG4769 82 YSFAGAILSTLFMYFLYQFGPKYLSLLGIS------VMGAFTHNLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHHHcCCceEeeeehh------hHHHHHHhHHHHHHHHHHHhcc
Confidence 333444555556677888898876333332 2335678888888888776543
No 318
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=39.61 E-value=86 Score=21.54 Aligned_cols=18 Identities=17% Similarity=0.471 Sum_probs=10.3
Q ss_pred hhHHHHHhHHHHHHHHHH
Q 018408 153 CRRTFQIDTIPLILGAII 170 (356)
Q Consensus 153 rr~~~~~~~~~~~i~~~~ 170 (356)
||...++|..+++++.+.
T Consensus 3 Rk~a~~~GN~lMglGmv~ 20 (89)
T PF10762_consen 3 RKNAFLLGNVLMGLGMVV 20 (89)
T ss_pred chhhHHHhhHHHHHhHHH
Confidence 555566666666555543
No 319
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=39.33 E-value=1.3e+02 Score=20.91 Aligned_cols=40 Identities=15% Similarity=0.118 Sum_probs=26.6
Q ss_pred HHHHHHhHHhhhhhhch-------hHHHHHhHHHHHHHHHHHHHhhh
Q 018408 137 AFVGSISSGSLADKLGC-------RRTFQIDTIPLILGAIISAQAHS 176 (356)
Q Consensus 137 ~~~~~~~~g~l~dr~Gr-------r~~~~~~~~~~~i~~~~~~~~~~ 176 (356)
...+.+..+++.+|.-+ ++.+.++.++...+..++++..+
T Consensus 31 ~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS 77 (86)
T PF10785_consen 31 ATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRS 77 (86)
T ss_pred HHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 33455556666666544 67777777777777777777655
No 320
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=39.10 E-value=1.1e+02 Score=27.90 Aligned_cols=18 Identities=17% Similarity=0.248 Sum_probs=11.4
Q ss_pred chhhhcccCcchhhHHHH
Q 018408 314 QWSELLEEPHSRVAFIGD 331 (356)
Q Consensus 314 ~~~~~l~~~~~~~~~~~~ 331 (356)
.++..+++|..+...++.
T Consensus 237 ~~~~~~~nP~~~a~~lgl 254 (385)
T PF03547_consen 237 SILKLFKNPPLIAIILGL 254 (385)
T ss_pred HHHHHHhCcHHHHHHHHH
Confidence 345566777777666665
No 321
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=38.99 E-value=1.5e+02 Score=21.38 Aligned_cols=6 Identities=33% Similarity=0.368 Sum_probs=2.3
Q ss_pred HHhhhh
Q 018408 144 SGSLAD 149 (356)
Q Consensus 144 ~g~l~d 149 (356)
.|...|
T Consensus 62 lG~WLD 67 (100)
T TIGR02230 62 VGIWLD 67 (100)
T ss_pred HHHHHH
Confidence 333334
No 322
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=38.98 E-value=2.7e+02 Score=24.42 Aligned_cols=56 Identities=14% Similarity=0.052 Sum_probs=32.1
Q ss_pred HHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhcc
Q 018408 180 MLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPA 236 (356)
Q Consensus 180 ~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 236 (356)
.-..|.+.|+-. ..+...++++.-+||.+++--..--...+..++.++.++++-.+
T Consensus 22 ~~~lr~~~g~~~-vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l 77 (287)
T PF07760_consen 22 IPPLRVILGFPF-VLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLL 77 (287)
T ss_pred hhHHHHHHHHHH-HHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677777765 33455677888889965543333333444444555555554443
No 323
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=36.94 E-value=6.4e+02 Score=28.19 Aligned_cols=19 Identities=26% Similarity=0.277 Sum_probs=10.2
Q ss_pred hHHHHHHhHHHHHHHHHHh
Q 018408 243 WRTMLYIASLPGFILALGM 261 (356)
Q Consensus 243 w~~~~~~~~~~~~~~~~~~ 261 (356)
|+..+++.+++.++.++..
T Consensus 197 w~Lalv~l~~~pl~~~~~~ 215 (1466)
T PTZ00265 197 ARLTLCITCVFPLIYICGV 215 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 7777665554444444333
No 324
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=36.82 E-value=4.4e+02 Score=27.03 Aligned_cols=11 Identities=18% Similarity=0.123 Sum_probs=5.2
Q ss_pred HHHHHHHHHHH
Q 018408 89 VLIASMSNFLF 99 (356)
Q Consensus 89 ~~~~~~~~~~~ 99 (356)
++.++++.++.
T Consensus 13 l~~~~lG~~ll 23 (810)
T TIGR00844 13 VAYSCVGIFSS 23 (810)
T ss_pred hHHHHHHHHHH
Confidence 44445554444
No 325
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=35.41 E-value=1.8e+02 Score=21.25 Aligned_cols=22 Identities=9% Similarity=0.090 Sum_probs=12.3
Q ss_pred HHHhhhhhhhhHHHHHHHhhcC
Q 018408 186 LVGLGIGVNTVLVPIYISEVAP 207 (356)
Q Consensus 186 l~G~~~g~~~~~~~~~~~e~~p 207 (356)
+.+.|.-+.++...++..|...
T Consensus 58 ~l~tGf~GgfTTFSTf~~e~~~ 79 (108)
T PRK14229 58 ILATGFCGGLTTFSTLNDELQR 79 (108)
T ss_pred HHHhhHccccccHHHHHHHHHH
Confidence 3344444455666666666664
No 326
>COG3389 Uncharacterized protein conserved in archaea [Function unknown]
Probab=34.16 E-value=90 Score=26.12 Aligned_cols=30 Identities=23% Similarity=0.079 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHhHHhhhhhhchhHHHHH
Q 018408 130 VSIFIAGAFVGSISSGSLADKLGCRRTFQI 159 (356)
Q Consensus 130 ~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~ 159 (356)
.+.+.+++++....+-.++=|+|||+++-.
T Consensus 34 ns~yyfv~Il~atlfill~Ik~~~kwI~r~ 63 (277)
T COG3389 34 NSVYYFVYILVATLFILLAIKLGRKWIFRG 63 (277)
T ss_pred CceeeehhHHHHHHHHHhheeecceeeehh
Confidence 566777788888888888999999986554
No 327
>COG4208 CysW ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]
Probab=33.47 E-value=2.8e+02 Score=23.63 Aligned_cols=46 Identities=7% Similarity=-0.102 Sum_probs=23.7
Q ss_pred hhHHHHHHHhhcCCCccchhHHHhHHHHHHHHHHHHHhhhccCCCC
Q 018408 195 TVLVPIYISEVAPTKYRGSLGTLCQVGTCLGIITSLFLGIPAEDDP 240 (356)
Q Consensus 195 ~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 240 (356)
+.++.++...-+.-+-|+...++...-+++...++.++.-.+....
T Consensus 84 FGv~aAW~iakf~F~Gk~lL~tlIDlPFsVSPVvaGl~~vLl~g~~ 129 (287)
T COG4208 84 FGVAAAWAIARFEFPGKALLLTLIDLPFSVSPVVAGLVYVLLFGSN 129 (287)
T ss_pred HHHHHHHHHHHccCCchhhhhhhhcCCCcccHHHHHHHHHHHHccc
Confidence 3333334433343344556666666666666666665544444433
No 328
>KOG3312 consensus Predicted membrane protein [Function unknown]
Probab=32.78 E-value=1.5e+02 Score=22.87 Aligned_cols=26 Identities=0% Similarity=0.056 Sum_probs=12.1
Q ss_pred HHhhcccCChHHHHhcCCHHHHHHHH
Q 018408 259 LGMQFTVESPRWLCKGGMLNDAKAVI 284 (356)
Q Consensus 259 ~~~~~~~e~p~~~~~~~~~~~~~~~~ 284 (356)
+.|..+.++.+|...+...+++.+.+
T Consensus 25 itWvlvYRt~~Yk~LKa~vdK~sKKL 50 (186)
T KOG3312|consen 25 ITWVLVYRTDKYKRLKAEVDKQSKKL 50 (186)
T ss_pred ceEEEEEehhHHHHHHHHHHHHHHHH
Confidence 33444556655544444444444333
No 329
>TIGR02978 phageshock_pspC phage shock protein C. All members of this protein family are the phage shock protein PspC. These proteins contain a PspC domain, as do other members of the larger family of proteins described by Pfam model pfam04024. The phage shock regulon is restricted to the Proteobacteria and somewhat sparsely distributed there. It is expressed, under positive control of a sigma-54-dependent transcription factor, PspF, which binds and is modulated by PspA. Stresses that induce the psp regulon include phage secretin overexpression, ethanol, heat shock, and protein export defects.
Probab=32.21 E-value=51 Score=24.67 Aligned_cols=11 Identities=9% Similarity=-0.115 Sum_probs=7.0
Q ss_pred HHhhcccCChH
Q 018408 259 LGMQFTVESPR 269 (356)
Q Consensus 259 ~~~~~~~e~p~ 269 (356)
++++++|+.|.
T Consensus 53 i~w~~lp~~p~ 63 (121)
T TIGR02978 53 ALWLLLDKKPI 63 (121)
T ss_pred HHHHHHhcCcc
Confidence 45566787763
No 330
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.93 E-value=1.5e+02 Score=21.62 Aligned_cols=32 Identities=28% Similarity=0.263 Sum_probs=21.4
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhh
Q 018408 165 ILGAIISAQAHSLDEMLWGRFLVGLGIGVNTV 196 (356)
Q Consensus 165 ~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~ 196 (356)
.++.++=-++++-++.++...++|++.|....
T Consensus 61 ~iG~llD~~agTsPwglIv~lllGf~AG~lnv 92 (116)
T COG5336 61 GIGWLLDKFAGTSPWGLIVFLLLGFGAGVLNV 92 (116)
T ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 34455555676666667777888988876644
No 331
>PRK02237 hypothetical protein; Provisional
Probab=31.58 E-value=1.2e+02 Score=22.06 Aligned_cols=46 Identities=17% Similarity=0.039 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHH
Q 018408 126 EGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIIS 171 (356)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 171 (356)
.|-+-..|.-.+++.++++++..|+.-.-+.=.+|..+..++..+.
T Consensus 58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh
Confidence 5666778888888999999999998876666666666666665444
No 332
>PF01405 PsbT: Photosystem II reaction centre T protein; InterPro: IPR001743 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbT found in PSII, which is thought to be associated with the D1 (PsbA) - D2 (PsbD) heterodimer. PsbT may be involved in the formation and/or stabilisation of dimeric PSII complexes, because in the absence of this protein dimeric PSII complexes were found to be less abundant. Furthermore, although PsbT does not confer photo-protection, it is required for the efficient recovery of photo-damaged PSII [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3BZ1_T 1S5L_t 2AXT_t 3KZI_T 3PRQ_T 3BZ2_T 3PRR_T 4FBY_g 3A0H_t 3A0B_T ....
Probab=31.44 E-value=89 Score=16.64 Aligned_cols=11 Identities=36% Similarity=0.404 Sum_probs=3.7
Q ss_pred HHhhcccCChH
Q 018408 259 LGMQFTVESPR 269 (356)
Q Consensus 259 ~~~~~~~e~p~ 269 (356)
....+++|.|+
T Consensus 18 ffAI~FRePPr 28 (29)
T PF01405_consen 18 FFAIFFREPPR 28 (29)
T ss_dssp HHHHHSS----
T ss_pred HhhhhccCCCC
Confidence 33455677764
No 333
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=30.70 E-value=95 Score=22.52 Aligned_cols=46 Identities=24% Similarity=0.132 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHH
Q 018408 126 EGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIIS 171 (356)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 171 (356)
.|-.-++|.-.+++.++++++..|+.-.-+.=.+|..+..++..+.
T Consensus 56 fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI 101 (107)
T PF02694_consen 56 FGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAII 101 (107)
T ss_pred chhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHhe
Confidence 5666778888889999999999999877776666766666665544
No 334
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=30.47 E-value=4.6e+02 Score=24.62 Aligned_cols=14 Identities=29% Similarity=0.605 Sum_probs=6.9
Q ss_pred hhhhhhchhHHHHH
Q 018408 146 SLADKLGCRRTFQI 159 (356)
Q Consensus 146 ~l~dr~Grr~~~~~ 159 (356)
-+++++|--..+++
T Consensus 344 SlSEhi~F~~AYli 357 (430)
T PF06123_consen 344 SLSEHIGFNLAYLI 357 (430)
T ss_pred HHHhhhchHHHHHH
Confidence 45565554444443
No 335
>PF04474 DUF554: Protein of unknown function (DUF554); InterPro: IPR007563 This is a family of uncharacterised prokaryotic proteins. Multiple predicted transmembrane regions suggest that the protein is membrane associated.
Probab=30.13 E-value=2e+02 Score=24.22 Aligned_cols=59 Identities=10% Similarity=0.225 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhh
Q 018408 132 IFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGI 191 (356)
Q Consensus 132 ~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~ 191 (356)
...+|..+|..+..++.||+.......++.....++.-...-.++...+++ -.+.|...
T Consensus 10 aIl~G~~iG~~~~~~i~~~~~~~l~~~~Gl~~l~iGi~~~~~~~~~~~vi~-slvlG~ii 68 (226)
T PF04474_consen 10 AILLGGLIGLLLGRRIPERIKDTLMQALGLCVLAIGISMALKGQNPLLVIL-SLVLGTII 68 (226)
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHhhHHHHHHHHHHHHccCccHHHHH-HHHHHHHH
Confidence 445677788888888888887777666677666666555444444444443 33444333
No 336
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=29.83 E-value=1.6e+02 Score=19.09 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=17.3
Q ss_pred hHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccc
Q 018408 176 SLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRG 212 (356)
Q Consensus 176 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~ 212 (356)
++..+.......++..+.... ...+++|..+.+++|
T Consensus 27 ~it~F~~n~~~g~i~i~I~l~-l~G~isE~i~~~Kgg 62 (63)
T PF06341_consen 27 NITAFLINQIAGLISIGITLF-LAGLISEFISKQKGG 62 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhccCC
Confidence 333333333334444443333 344778887764443
No 337
>PF04145 Ctr: Ctr copper transporter family; InterPro: IPR007274 The redox active metal copper is an essential cofactor in critical biological processes such as respiration, iron transport, oxidative stress protection, hormone production, and pigmentation. A widely conserved family of high-affinity copper transport proteins (Ctr proteins) mediates copper uptake at the plasma membrane. A series of clustered methionine residues in the hydrophilic extracellular domain, and an MXXXM motif in the second transmembrane domain, are important for copper uptake. These methionines probably coordinate copper during the process of metal transport.; GO: 0005375 copper ion transmembrane transporter activity, 0035434 copper ion transmembrane transport, 0016021 integral to membrane; PDB: 2LS4_A 2LS2_A 2LS3_A.
Probab=29.82 E-value=75 Score=24.23 Aligned_cols=11 Identities=18% Similarity=0.156 Sum_probs=5.6
Q ss_pred HHhhhhhhccc
Q 018408 345 AGLRSEKYCGY 355 (356)
Q Consensus 345 ~~~~~~~~~g~ 355 (356)
++.+++..+|+
T Consensus 131 ~aVv~G~~~G~ 141 (144)
T PF04145_consen 131 IAVVLGAGLGY 141 (144)
T ss_dssp SHHHHHHTTSS
T ss_pred HHHHHHHHHhe
Confidence 34455555554
No 338
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=29.43 E-value=5.2e+02 Score=24.83 Aligned_cols=72 Identities=22% Similarity=0.169 Sum_probs=44.5
Q ss_pred HHHHhhhhhhhhHHHHHHHhhcCC-CccchhHHHhHHHHHHH-HHHHHHhhhccCCCCchhHHHHHHhHHHHHHH
Q 018408 185 FLVGLGIGVNTVLVPIYISEVAPT-KYRGSLGTLCQVGTCLG-IITSLFLGIPAEDDPHWWRTMLYIASLPGFIL 257 (356)
Q Consensus 185 ~l~G~~~g~~~~~~~~~~~e~~p~-~~r~~~~~~~~~~~~~g-~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~ 257 (356)
+..|++.......--.-+.+.+|. +.+...+|-++...++- ..+.-.+++-+....| |-+.-.+.-++.++.
T Consensus 292 l~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~G-W~~~AlitPiv~lit 365 (509)
T COG3202 292 LAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVG-WFTGALITPLVMLIT 365 (509)
T ss_pred HHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhh-HHHHHHHHHHHHHHH
Confidence 344555555555555667788875 44778888887777776 4455556666666666 766555544444433
No 339
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=28.23 E-value=21 Score=27.02 Aligned_cols=11 Identities=9% Similarity=0.193 Sum_probs=4.5
Q ss_pred HHHHHhHHHHH
Q 018408 245 TMLYIASLPGF 255 (356)
Q Consensus 245 ~~~~~~~~~~~ 255 (356)
|++++.+++.+
T Consensus 2 W~l~~iii~~i 12 (130)
T PF12273_consen 2 WVLFAIIIVAI 12 (130)
T ss_pred eeeHHHHHHHH
Confidence 44444333333
No 340
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=28.05 E-value=2.6e+02 Score=21.77 Aligned_cols=50 Identities=20% Similarity=0.193 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 018408 131 SIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFL 186 (356)
Q Consensus 131 ~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 186 (356)
..+.++..+.+...-.+..|..||+.=.++. +++-+.++|..+++++.++
T Consensus 68 f~~Sl~Ggl~S~~vM~ll~~~~~~~~S~~gi------Si~Gai~HN~gQl~va~~i 117 (148)
T PF07456_consen 68 FLFSLAGGLLSLLVMALLKKLFKKKFSLIGI------SIAGAIAHNIGQLIVASLI 117 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccHHHH------HHHHHHHHHHHHHHHHHHH
Confidence 4455666677777777778886655433222 2233455666666665544
No 341
>PRK11715 inner membrane protein; Provisional
Probab=28.05 E-value=5.2e+02 Score=24.37 Aligned_cols=7 Identities=29% Similarity=0.809 Sum_probs=3.2
Q ss_pred hhhhhch
Q 018408 147 LADKLGC 153 (356)
Q Consensus 147 l~dr~Gr 153 (356)
+++++|-
T Consensus 351 lSEHigF 357 (436)
T PRK11715 351 LSEHIGF 357 (436)
T ss_pred HHhhhch
Confidence 4444443
No 342
>COG1811 Uncharacterized membrane protein, possible Na+ channel or pump [General function prediction only]
Probab=27.98 E-value=3e+02 Score=22.96 Aligned_cols=52 Identities=15% Similarity=0.160 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHH
Q 018408 133 FIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGR 184 (356)
Q Consensus 133 ~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 184 (356)
..+|..+|..+..++.||+-+-.+-.+|.....++.-...-+.|....++.-
T Consensus 12 Il~G~iiG~l~~~klper~k~~l~~~~Gl~~l~iGI~m~~~~~n~~~~ilsl 63 (228)
T COG1811 12 ILIGGIIGLLIGKKLPERIKDILMQCLGLAILGIGIKMALQAKNDIMILLAL 63 (228)
T ss_pred HHHHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHH
Confidence 4556777777777888888666666666666666665555566665554433
No 343
>PRK11875 psbT photosystem II reaction center protein T; Reviewed
Probab=26.72 E-value=1.1e+02 Score=16.50 Aligned_cols=10 Identities=10% Similarity=-0.027 Sum_probs=5.9
Q ss_pred HhhcccCChH
Q 018408 260 GMQFTVESPR 269 (356)
Q Consensus 260 ~~~~~~e~p~ 269 (356)
...+++|.|+
T Consensus 19 FAIfFRepPr 28 (31)
T PRK11875 19 FAIAFRDPPK 28 (31)
T ss_pred HhhhccCCCC
Confidence 3445677764
No 344
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=26.71 E-value=6.9e+02 Score=25.37 Aligned_cols=15 Identities=27% Similarity=0.310 Sum_probs=8.2
Q ss_pred HHHHHHhHHhhhhhh
Q 018408 137 AFVGSISSGSLADKL 151 (356)
Q Consensus 137 ~~~~~~~~g~l~dr~ 151 (356)
..+.+++.-.+.|++
T Consensus 170 ~l~~p~~~q~viD~V 184 (709)
T COG2274 170 ALATPLFSQIVIDKV 184 (709)
T ss_pred HHHHHHHHHHHHHhh
Confidence 444455555666664
No 345
>PRK07419 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Provisional
Probab=25.91 E-value=4.7e+02 Score=23.20 Aligned_cols=12 Identities=17% Similarity=0.055 Sum_probs=6.2
Q ss_pred HhhcCCCccchh
Q 018408 203 SEVAPTKYRGSL 214 (356)
Q Consensus 203 ~e~~p~~~r~~~ 214 (356)
..=+|-+.||.+
T Consensus 137 ~gP~~l~y~gLG 148 (304)
T PRK07419 137 GPPFRLGYQGLG 148 (304)
T ss_pred CCCcccCCCCch
Confidence 333455666653
No 346
>PF07662 Nucleos_tra2_C: Na+ dependent nucleoside transporter C-terminus; InterPro: IPR011657 This entry consists of nucleoside transport proteins. Q62773 from SWISSPROT is a purine-specific Na+-nucleoside cotransporter localised to the bile canalicular membrane []. Q62674 from SWISSPROT is a Na+-dependent nucleoside transporter selective for pyrimidine nucleosides and adenosine. It also transports the anti-viral nucleoside analogues AZT and ddC []. This entry covers the C terminus of this family of transporters.; PDB: 3TIJ_A.
Probab=25.83 E-value=3.9e+02 Score=22.25 Aligned_cols=30 Identities=17% Similarity=0.029 Sum_probs=12.8
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHhhcCC
Q 018408 179 EMLWGRFLVGLGIGVNTVLVPIYISEVAPT 208 (356)
Q Consensus 179 ~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~ 208 (356)
..+...++.||+.=+.......-+..+.|.
T Consensus 150 ~~I~tyaLcGFAN~sSiGI~iG~i~~laP~ 179 (210)
T PF07662_consen 150 QAIATYALCGFANFSSIGIQIGGIGALAPE 179 (210)
T ss_dssp HHHHHHHT-S--STHHHHHHHHHTGGG-GG
T ss_pred HHHHHHHHHhccchhHHHHHHHHHhccCch
Confidence 344455566665444444444455555543
No 347
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=25.82 E-value=5.6e+02 Score=24.08 Aligned_cols=66 Identities=15% Similarity=0.141 Sum_probs=34.9
Q ss_pred hhhhhchhH-----HHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHH
Q 018408 147 LADKLGCRR-----TFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGT 216 (356)
Q Consensus 147 l~dr~Grr~-----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~ 216 (356)
+.+.+.+++ -+++|+.+...-.++.+++.......+ .+ ++...+......|+.-.....+||..++
T Consensus 314 lfE~~~~~~iHpiQY~LVGlAl~lFYlLLLSlSEhi~F~~A-Yl---iAa~a~i~Li~~Y~~~vl~~~k~~~~~~ 384 (430)
T PF06123_consen 314 LFELLSKLRIHPIQYLLVGLALVLFYLLLLSLSEHIGFNLA-YL---IAALACIGLISLYLSSVLKSWKRGLIFA 384 (430)
T ss_pred HHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhhchHHH-HH---HHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 444444443 456677777766777777765433221 11 1222333444456666666666665543
No 348
>COG1079 Uncharacterized ABC-type transport system, permease component [General function prediction only]
Probab=25.42 E-value=4.8e+02 Score=23.16 Aligned_cols=95 Identities=13% Similarity=-0.094 Sum_probs=54.6
Q ss_pred HHHHHhHHhhhhhhchhHHHHHhHHHHHHHHH-HHHH-hhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhH
Q 018408 138 FVGSISSGSLADKLGCRRTFQIDTIPLILGAI-ISAQ-AHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLG 215 (356)
Q Consensus 138 ~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~-~~~~-~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~ 215 (356)
.+..-+++.+++|-|.-.+=+=|..+.+..+. ...+ ..+.+.=+ +.|...|........+++.....++--.+.
T Consensus 21 LllaaLG~l~sERsGVlNIglEG~M~~gAf~~~~~~~~t~spw~gl----~~a~l~g~l~~ll~a~~ti~l~~nqiisG~ 96 (304)
T COG1079 21 LLLAALGGLFSERSGVLNIGLEGIMLLGAFSGALFAYGTGSPWLGL----LAAALVGALFGLLHAFLTIKLRANQIISGL 96 (304)
T ss_pred HHHHHHHHHHHHHhceeeechhhHHHHHHHHHHHHHHccccHHHHH----HHHHHHHHHHHHHHHHHHHhhccccchhHH
Confidence 34555678889998765543223222222221 1122 23444333 344444555566666777777777777788
Q ss_pred HHhHHHHHHHHHHHHHhhhcc
Q 018408 216 TLCQVGTCLGIITSLFLGIPA 236 (356)
Q Consensus 216 ~~~~~~~~~g~~~~~~i~~~l 236 (356)
++.-++..+...++..+.+.-
T Consensus 97 alnl~a~Glt~fl~~~~~~~~ 117 (304)
T COG1079 97 ALNLLASGLTAFLGQSIFGQP 117 (304)
T ss_pred HHHHHHHHHHHHHHHHHhccC
Confidence 887778888777777765544
No 349
>PF04550 Phage_holin_2: Phage holin family 2 ; InterPro: IPR007633 This entry represents the Bacteriophage P2, GpY, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=25.22 E-value=1.6e+02 Score=20.51 Aligned_cols=30 Identities=20% Similarity=0.391 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHhhcC
Q 018408 178 DEMLWGRFLVGLGIGVNTVLVPIYISEVAP 207 (356)
Q Consensus 178 ~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p 207 (356)
+=++++|.+.|-+.+...........|+-|
T Consensus 32 ~RL~iGR~ilGs~~S~~Aga~Li~~Pdl~p 61 (89)
T PF04550_consen 32 LRLFIGRVILGSAVSVVAGAALIQFPDLPP 61 (89)
T ss_pred hhHHhHHHHHhhHHHHHHHHHHhcCCCCCH
Confidence 346667777777766655555544444433
No 350
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=25.14 E-value=1.8e+02 Score=28.04 Aligned_cols=26 Identities=23% Similarity=0.186 Sum_probs=11.4
Q ss_pred CccchhHHHhHHHHHHHHHHHHHhhh
Q 018408 209 KYRGSLGTLCQVGTCLGIITSLFLGI 234 (356)
Q Consensus 209 ~~r~~~~~~~~~~~~~g~~~~~~i~~ 234 (356)
+.||..+...-..+.+.+.++..+++
T Consensus 293 ~~rg~l~t~~i~~y~~~~~iaGy~S~ 318 (521)
T PF02990_consen 293 NNRGSLLTAAIILYALTSFIAGYVSA 318 (521)
T ss_pred cCcchHHHHHHHHHHHHhhHHHHHHH
Confidence 34454444444444444444444443
No 351
>PRK11715 inner membrane protein; Provisional
Probab=25.08 E-value=5.9e+02 Score=24.02 Aligned_cols=67 Identities=16% Similarity=0.138 Sum_probs=35.1
Q ss_pred hhhhhhchhH-----HHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCCCccchhHH
Q 018408 146 SLADKLGCRR-----TFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAPTKYRGSLGT 216 (356)
Q Consensus 146 ~l~dr~Grr~-----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p~~~r~~~~~ 216 (356)
++.+...+++ -+++|+.+...-.++.+++.......+ .+ ++...+......|+.-.....+||..++
T Consensus 319 FlfE~~~~~~iHpiQYlLVGlAl~lFYLLLLSlSEHigF~~A-Yl---iAa~a~v~li~~Y~~~vl~~~k~g~~~~ 390 (436)
T PRK11715 319 FLFELLKKLRIHPVQYLLVGLALVLFYLLLLSLSEHIGFTLA-YL---IAALACVLLIGFYLSAVLRSWKRGLLFA 390 (436)
T ss_pred HHHHHhcCceecHHHHHHHHHHHHHHHHHHHHHHhhhchHHH-HH---HHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 3455444443 456677777776777777765433221 11 1222233344446666666666665554
No 352
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=24.91 E-value=2.2e+02 Score=21.89 Aligned_cols=25 Identities=8% Similarity=0.166 Sum_probs=18.3
Q ss_pred HHHhhcCCCccchhHHHhHHHHHHH
Q 018408 201 YISEVAPTKYRGSLGTLCQVGTCLG 225 (356)
Q Consensus 201 ~~~e~~p~~~r~~~~~~~~~~~~~g 225 (356)
-+.|++|+..|....+.++......
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~~~~ 83 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTSSAV 83 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHHHHH
Confidence 4589999999988887766544433
No 353
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=24.86 E-value=3.6e+02 Score=23.29 Aligned_cols=11 Identities=18% Similarity=0.184 Sum_probs=4.6
Q ss_pred HHHHHHhHHHH
Q 018408 244 RTMLYIASLPG 254 (356)
Q Consensus 244 ~~~~~~~~~~~ 254 (356)
++..++..++.
T Consensus 130 ~~T~~~~t~LF 140 (294)
T KOG2881|consen 130 KYTYYLATALF 140 (294)
T ss_pred HHHHHHHHHHH
Confidence 34444444433
No 354
>PF11712 Vma12: Endoplasmic reticulum-based factor for assembly of V-ATPase; InterPro: IPR021013 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) (3.6.3.14 from EC) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins []. The yeast vacuolar proton-translocating ATPase (V-ATPase) is the best characterised member of the V-ATPase family. A total of thirteen genes are required for encoding the subunits of the enzyme complex itself and an additional three for providing factors necessary for the assembly of the whole. Vma12 is one of these latter, all three of which are localised to the endoplasmic reticulum [].
Probab=24.54 E-value=2.9e+02 Score=21.18 Aligned_cols=15 Identities=13% Similarity=0.020 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHhHHh
Q 018408 132 IFIAGAFVGSISSGS 146 (356)
Q Consensus 132 ~~~~~~~~~~~~~g~ 146 (356)
+..+..+++..++||
T Consensus 83 ~Nilvsv~~~~~~~~ 97 (142)
T PF11712_consen 83 FNILVSVFAVFFAGW 97 (142)
T ss_pred HHHHHHHHHHHHHHH
Confidence 333444555555555
No 355
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=24.26 E-value=5.5e+02 Score=23.41 Aligned_cols=97 Identities=15% Similarity=0.139 Sum_probs=56.8
Q ss_pred HHHHHHhHHhhhhhh--chhHHHHHhHHHHHHHHHHHHHh--hhHH----------------HHHHH--H-HHHHhhhhh
Q 018408 137 AFVGSISSGSLADKL--GCRRTFQIDTIPLILGAIISAQA--HSLD----------------EMLWG--R-FLVGLGIGV 193 (356)
Q Consensus 137 ~~~~~~~~g~l~dr~--Grr~~~~~~~~~~~i~~~~~~~~--~~~~----------------~~~~~--~-~l~G~~~g~ 193 (356)
.++..+++-.++|.. |++..+..+..+.+++.++.... .|+. ..+.. | ++.|+.++.
T Consensus 176 AI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~~~a~~~i~~d~ril~LG~~qsl 255 (354)
T PF05631_consen 176 AIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGSFREAWRAILSDPRILLLGLIQSL 255 (354)
T ss_pred HHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHHHHHHHHHHHcCchhHHHHHHHHH
Confidence 344455555666765 45777888887777777665431 2211 11111 1 467888888
Q ss_pred hhhHHHHHHHhhcCCCc---cchhHHHhHHHHHHHHHHHHHhh
Q 018408 194 NTVLVPIYISEVAPTKY---RGSLGTLCQVGTCLGIITSLFLG 233 (356)
Q Consensus 194 ~~~~~~~~~~e~~p~~~---r~~~~~~~~~~~~~g~~~~~~i~ 233 (356)
.....+.++-.|.|.-. +..=.|+......+..++|..+.
T Consensus 256 FE~smy~FVflWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf 298 (354)
T PF05631_consen 256 FEGSMYLFVFLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLF 298 (354)
T ss_pred HHHHHHHheeeeeceecCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 88889999988888522 33444554444444444444443
No 356
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=24.23 E-value=2.3e+02 Score=19.10 Aligned_cols=10 Identities=20% Similarity=0.165 Sum_probs=4.1
Q ss_pred HHHhHHhhhh
Q 018408 140 GSISSGSLAD 149 (356)
Q Consensus 140 ~~~~~g~l~d 149 (356)
.+++.|++.+
T Consensus 23 isfi~Gy~~q 32 (76)
T PF06645_consen 23 ISFIVGYITQ 32 (76)
T ss_pred HHHHHHHHHH
Confidence 3344444444
No 357
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein
Probab=24.20 E-value=3.2e+02 Score=25.97 Aligned_cols=28 Identities=7% Similarity=-0.072 Sum_probs=15.6
Q ss_pred hHHHHHhHHHHHHHHHHHHHhhhHHHHH
Q 018408 154 RRTFQIDTIPLILGAIISAQAHSLDEML 181 (356)
Q Consensus 154 r~~~~~~~~~~~i~~~~~~~~~~~~~~~ 181 (356)
++.+....+.+.++.++.++.+++....
T Consensus 341 ~~~~~~~~~t~~~sa~WHG~~~gYyl~f 368 (465)
T PLN02332 341 KPGFFQLLATQTVSAVWHGLYPGYILFF 368 (465)
T ss_pred chhHHHHHHHHHHHHHHhcCCcHHHHHH
Confidence 3444444455556666676666655443
No 358
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=23.55 E-value=4.2e+02 Score=21.80 Aligned_cols=12 Identities=17% Similarity=0.074 Sum_probs=4.7
Q ss_pred HHHHHHHHHhhc
Q 018408 252 LPGFILALGMQF 263 (356)
Q Consensus 252 ~~~~~~~~~~~~ 263 (356)
++++++.++.++
T Consensus 185 iig~i~~~~~~~ 196 (206)
T PF06570_consen 185 IIGVIAFALRFY 196 (206)
T ss_pred HHHHHHHHHHHH
Confidence 333444433333
No 359
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=23.39 E-value=1.4e+02 Score=27.28 Aligned_cols=13 Identities=0% Similarity=0.168 Sum_probs=9.6
Q ss_pred hhhhchhHHHHHh
Q 018408 148 ADKLGCRRTFQID 160 (356)
Q Consensus 148 ~dr~Grr~~~~~~ 160 (356)
.||+.-.+++...
T Consensus 208 ~e~ft~sKllav~ 220 (416)
T KOG2765|consen 208 VERFTLSKLLAVF 220 (416)
T ss_pred cchhhHHHHHHHH
Confidence 8999888876543
No 360
>CHL00031 psbT photosystem II protein T
Probab=23.36 E-value=1.3e+02 Score=16.54 Aligned_cols=10 Identities=30% Similarity=0.311 Sum_probs=6.2
Q ss_pred HhhcccCChH
Q 018408 260 GMQFTVESPR 269 (356)
Q Consensus 260 ~~~~~~e~p~ 269 (356)
...+++|.|+
T Consensus 19 FAI~FRePPr 28 (33)
T CHL00031 19 FAIFFREPPK 28 (33)
T ss_pred HhheecCCCC
Confidence 3455677775
No 361
>COG2119 Predicted membrane protein [Function unknown]
Probab=23.08 E-value=3.4e+02 Score=22.05 Aligned_cols=38 Identities=18% Similarity=0.147 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHH
Q 018408 132 IFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAI 169 (356)
Q Consensus 132 ~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 169 (356)
...+...++.+.+.++++|+..|.+-.++.+++.+..+
T Consensus 142 g~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fal 179 (190)
T COG2119 142 GMILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFAL 179 (190)
T ss_pred HHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHH
Confidence 34455677788888999999999988877666555543
No 362
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=22.79 E-value=2.5e+02 Score=25.47 Aligned_cols=74 Identities=14% Similarity=0.083 Sum_probs=47.5
Q ss_pred hhhhcchhhH-HHHHHHhCCCCChh---HHHHHHHHHHHHHHHHHHhHHhhhhhhchhHHHHHhHHHHHHHHHHHHHh
Q 018408 101 YHIGVMNGPI-VSIAKELGFEGNPI---LEGLVVSIFIAGAFVGSISSGSLADKLGCRRTFQIDTIPLILGAIISAQA 174 (356)
Q Consensus 101 ~~~~~~~~~~-~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~ 174 (356)
.+.+.+-+-. |...++++-+.+.. ...+.-...++|..++..+.+++.|++|....+.+..+.+.++.+.+...
T Consensus 45 ~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 45 VGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 3334444433 34555565431111 23355666778888888888999999999999888888888877776653
No 363
>COG5202 Predicted membrane protein [Function unknown]
Probab=21.87 E-value=6.1e+02 Score=23.07 Aligned_cols=102 Identities=9% Similarity=-0.040 Sum_probs=51.2
Q ss_pred hhchhHHHHHhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcC---------CCccchhHHHhHH
Q 018408 150 KLGCRRTFQIDTIPLILGAIISAQAHSLDEMLWGRFLVGLGIGVNTVLVPIYISEVAP---------TKYRGSLGTLCQV 220 (356)
Q Consensus 150 r~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~p---------~~~r~~~~~~~~~ 220 (356)
+.|.|..+-..+.-+.++.++.+..+.+...++. +.+...+.-...-.+.-.|+ .+.---..|.+++
T Consensus 345 kkgkkpgF~stl~Tf~iSA~WHGi~pgYyltF~s----~a~~qt~~K~~rR~~rpfFlr~d~~tp~p~k~~ydv~g~~a~ 420 (512)
T COG5202 345 KKGKKPGFWSTLGTFAISALWHGINPGYYLTFLS----LAASQTIVKENRRLLRPFFLREDGVTPLPSKSLYDVLGRIAM 420 (512)
T ss_pred ecCCCcchHHHHHHHHHHHHHccCCchHHHHHHH----HHHHhHHHHHHHhhcCcccccccCCCCCchhHHHHHHHHHHH
Confidence 4588887777777777777777766665544322 11111110001111111222 1112234555666
Q ss_pred HHHHHHHHHHHhhhccCCCCchhHHHHHHhHHHHH
Q 018408 221 GTCLGIITSLFLGIPAEDDPHWWRTMLYIASLPGF 255 (356)
Q Consensus 221 ~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~ 255 (356)
-...+.++.+++.--+.+...-|+.++.+.=+...
T Consensus 421 ~l~~~Y~~~sF~lL~lk~s~~VW~svYF~vHI~~a 455 (512)
T COG5202 421 LLLTTYFSASFFLLSLKDSMYVWRSVYFAVHIFLA 455 (512)
T ss_pred HHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHH
Confidence 66666666666554444443348888776544433
No 364
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.32 E-value=58 Score=29.10 Aligned_cols=10 Identities=20% Similarity=0.225 Sum_probs=4.2
Q ss_pred HHHHHHHHHh
Q 018408 223 CLGIITSLFL 232 (356)
Q Consensus 223 ~~g~~~~~~i 232 (356)
..|++++.++
T Consensus 224 g~~gfl~~Il 233 (372)
T KOG2927|consen 224 GAGGFLAFIL 233 (372)
T ss_pred chhHHHHHHH
Confidence 4444444443
No 365
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=20.55 E-value=1.1e+03 Score=25.63 Aligned_cols=35 Identities=14% Similarity=0.273 Sum_probs=22.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhhcchhhHHHHHHHhC
Q 018408 84 PAFPHVLIASMSNFLFGYHIGVMNGPIVSIAKELG 118 (356)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 118 (356)
+.|+.+++..++.+..|.....+......+.+-|-
T Consensus 661 pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~ 695 (1228)
T KOG0055|consen 661 PEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFY 695 (1228)
T ss_pred chhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Confidence 35666777777777777776666665555555554
No 366
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=20.44 E-value=2.6e+02 Score=21.58 Aligned_cols=24 Identities=17% Similarity=0.254 Sum_probs=17.8
Q ss_pred HHHhhcCCCccchhHHHhHHHHHH
Q 018408 201 YISEVAPTKYRGSLGTLCQVGTCL 224 (356)
Q Consensus 201 ~~~e~~p~~~r~~~~~~~~~~~~~ 224 (356)
-+.|++|+..|..+.+.+......
T Consensus 57 ALkDm~Pp~~R~~i~~~~s~t~s~ 80 (145)
T TIGR00986 57 ALKDIVPPTTRGWIYHKYSTTTNF 80 (145)
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHH
Confidence 458999999998877776554443
No 367
>COG4177 LivM ABC-type branched-chain amino acid transport system, permease component [Amino acid transport and metabolism]
Probab=20.37 E-value=4.3e+02 Score=23.58 Aligned_cols=18 Identities=22% Similarity=0.139 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHhhhccC
Q 018408 220 VGTCLGIITSLFLGIPAE 237 (356)
Q Consensus 220 ~~~~~g~~~~~~i~~~l~ 237 (356)
.....|...||+++..+.
T Consensus 250 vlGG~Gt~~G~v~Ga~l~ 267 (314)
T COG4177 250 VLGGAGTLFGALLGAVLV 267 (314)
T ss_pred HHcCccccHHHHHHHHHH
Confidence 334445556666655444
Done!