Query 018414
Match_columns 356
No_of_seqs 513 out of 2970
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 14:53:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018414.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018414hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jsk_A Cypbp37 protein; octame 100.0 3.1E-40 1.1E-44 311.9 11.1 275 58-332 45-341 (344)
2 2gjc_A Thiazole biosynthetic e 100.0 2.8E-34 9.6E-39 269.8 16.5 268 59-326 34-325 (326)
3 1rp0_A ARA6, thiazole biosynth 100.0 1.1E-31 3.8E-36 249.1 19.1 280 55-334 4-283 (284)
4 3fpz_A Thiazole biosynthetic e 99.9 1.7E-24 5.6E-29 204.4 20.9 269 57-325 32-324 (326)
5 3v76_A Flavoprotein; structura 99.7 3.4E-17 1.2E-21 159.6 16.1 212 79-320 17-266 (417)
6 2i0z_A NAD(FAD)-utilizing dehy 99.7 6.3E-17 2.2E-21 159.0 17.7 164 88-267 24-222 (447)
7 2gqf_A Hypothetical protein HI 99.7 9.3E-16 3.2E-20 148.7 18.2 204 90-322 4-249 (401)
8 3oz2_A Digeranylgeranylglycero 99.6 6.8E-15 2.3E-19 140.5 15.2 132 90-243 4-163 (397)
9 2cul_A Glucose-inhibited divis 99.6 8.2E-15 2.8E-19 131.3 13.8 197 90-326 3-232 (232)
10 4at0_A 3-ketosteroid-delta4-5a 99.6 1.3E-14 4.4E-19 144.9 15.6 141 89-242 40-264 (510)
11 1qo8_A Flavocytochrome C3 fuma 99.6 1.8E-14 6.1E-19 145.7 14.1 144 88-243 119-313 (566)
12 1y0p_A Fumarate reductase flav 99.6 3.7E-14 1.3E-18 143.5 16.5 144 88-243 124-318 (571)
13 2h88_A Succinate dehydrogenase 99.5 4.3E-14 1.5E-18 144.0 14.6 145 89-244 17-219 (621)
14 2bs2_A Quinol-fumarate reducta 99.5 8.5E-14 2.9E-18 142.8 15.6 145 89-244 4-222 (660)
15 3cgv_A Geranylgeranyl reductas 99.5 1.1E-13 3.9E-18 132.6 15.0 131 90-242 4-162 (397)
16 3gyx_A Adenylylsulfate reducta 99.5 4.6E-14 1.6E-18 144.7 11.1 148 89-245 21-236 (662)
17 2wdq_A Succinate dehydrogenase 99.5 1.4E-13 4.7E-18 139.7 14.0 143 90-243 7-207 (588)
18 1d4d_A Flavocytochrome C fumar 99.5 3.5E-13 1.2E-17 136.3 16.3 143 89-243 125-318 (572)
19 1chu_A Protein (L-aspartate ox 99.5 1.2E-13 4.1E-18 138.8 12.6 146 88-244 6-210 (540)
20 1jnr_A Adenylylsulfate reducta 99.5 1.7E-13 5.9E-18 140.5 13.7 145 89-244 21-220 (643)
21 3nlc_A Uncharacterized protein 99.5 9.8E-14 3.4E-18 139.2 11.4 137 90-242 107-277 (549)
22 1kf6_A Fumarate reductase flav 99.5 2.7E-13 9.4E-18 137.8 13.9 144 90-244 5-199 (602)
23 3dme_A Conserved exported prot 99.5 4.7E-13 1.6E-17 126.6 14.3 139 90-242 4-209 (369)
24 2e5v_A L-aspartate oxidase; ar 99.5 4.4E-13 1.5E-17 132.5 14.4 136 92-244 1-178 (472)
25 3atr_A Conserved archaeal prot 99.5 6.1E-13 2.1E-17 130.7 14.9 136 90-245 6-165 (453)
26 3e1t_A Halogenase; flavoprotei 99.5 8.5E-13 2.9E-17 131.7 16.1 143 89-245 6-175 (512)
27 3nix_A Flavoprotein/dehydrogen 99.4 1.6E-12 5.4E-17 125.9 15.4 137 90-242 5-166 (421)
28 3nyc_A D-arginine dehydrogenas 99.4 8.5E-13 2.9E-17 125.6 12.8 136 88-242 7-209 (381)
29 2x3n_A Probable FAD-dependent 99.4 1.2E-12 4.2E-17 126.0 13.6 133 89-243 5-167 (399)
30 1y56_B Sarcosine oxidase; dehy 99.4 2E-12 7E-17 123.5 14.8 136 90-242 5-205 (382)
31 3dje_A Fructosyl amine: oxygen 99.4 3.3E-12 1.1E-16 124.5 15.0 138 89-242 5-221 (438)
32 3ps9_A TRNA 5-methylaminomethy 99.4 4.1E-12 1.4E-16 131.0 16.1 137 90-243 272-474 (676)
33 2qa1_A PGAE, polyketide oxygen 99.4 5.9E-12 2E-16 125.3 16.3 135 88-243 9-166 (500)
34 3da1_A Glycerol-3-phosphate de 99.4 2.2E-12 7.6E-17 130.2 13.2 143 89-242 17-232 (561)
35 2qa2_A CABE, polyketide oxygen 99.4 6.7E-12 2.3E-16 124.9 16.3 135 88-243 10-167 (499)
36 3rp8_A Flavoprotein monooxygen 99.4 5E-12 1.7E-16 122.1 14.6 131 89-245 22-184 (407)
37 3ihg_A RDME; flavoenzyme, anth 99.4 6.5E-12 2.2E-16 125.9 15.6 133 89-242 4-183 (535)
38 2gag_B Heterotetrameric sarcos 99.4 4E-12 1.4E-16 122.2 13.1 136 90-242 21-230 (405)
39 3alj_A 2-methyl-3-hydroxypyrid 99.4 7.6E-12 2.6E-16 119.8 14.7 127 90-243 11-161 (379)
40 3i3l_A Alkylhalidase CMLS; fla 99.4 4.4E-12 1.5E-16 128.6 13.2 133 89-242 22-188 (591)
41 2zxi_A TRNA uridine 5-carboxym 99.3 1.2E-11 4.1E-16 125.1 16.0 137 90-242 27-180 (637)
42 2gmh_A Electron transfer flavo 99.3 5.6E-12 1.9E-16 127.8 13.1 145 90-243 35-218 (584)
43 1k0i_A P-hydroxybenzoate hydro 99.3 3.4E-12 1.2E-16 122.6 11.0 136 90-245 2-166 (394)
44 1ryi_A Glycine oxidase; flavop 99.3 7.1E-12 2.4E-16 119.6 13.0 136 89-242 16-219 (382)
45 3ces_A MNMG, tRNA uridine 5-ca 99.3 1.4E-11 4.8E-16 125.0 15.4 138 89-242 27-181 (651)
46 3fmw_A Oxygenase; mithramycin, 99.3 5.2E-12 1.8E-16 127.7 11.6 132 89-242 48-207 (570)
47 3pvc_A TRNA 5-methylaminomethy 99.3 1.6E-11 5.4E-16 126.8 15.4 137 90-243 264-470 (689)
48 2oln_A NIKD protein; flavoprot 99.3 5.8E-12 2E-16 121.1 11.3 135 90-242 4-208 (397)
49 2vou_A 2,6-dihydroxypyridine h 99.3 3.3E-11 1.1E-15 116.1 16.3 129 90-243 5-154 (397)
50 3cp8_A TRNA uridine 5-carboxym 99.3 2E-11 6.9E-16 123.7 15.1 138 89-242 20-174 (641)
51 2xdo_A TETX2 protein; tetracyc 99.3 2.3E-11 7.8E-16 117.2 14.1 137 86-245 22-185 (398)
52 4fk1_A Putative thioredoxin re 99.3 1.5E-11 5.2E-16 114.0 12.3 113 89-242 5-117 (304)
53 3ka7_A Oxidoreductase; structu 99.3 5.6E-11 1.9E-15 115.0 16.6 39 91-130 1-39 (425)
54 4a9w_A Monooxygenase; baeyer-v 99.3 4.3E-12 1.5E-16 119.3 8.1 130 90-242 3-132 (357)
55 2gf3_A MSOX, monomeric sarcosi 99.3 3.3E-11 1.1E-15 115.1 14.2 135 90-242 3-205 (389)
56 4gcm_A TRXR, thioredoxin reduc 99.3 1.6E-11 5.5E-16 114.1 11.3 112 89-242 5-116 (312)
57 2r0c_A REBC; flavin adenine di 99.3 4.3E-11 1.5E-15 120.4 14.6 134 88-243 24-197 (549)
58 2uzz_A N-methyl-L-tryptophan o 99.3 2.5E-11 8.5E-16 115.4 12.0 135 90-242 2-204 (372)
59 3c96_A Flavin-containing monoo 99.3 5.1E-11 1.7E-15 115.2 14.2 135 90-243 4-170 (410)
60 1pj5_A N,N-dimethylglycine oxi 99.3 4.2E-11 1.4E-15 126.2 14.6 136 90-242 4-207 (830)
61 2qcu_A Aerobic glycerol-3-phos 99.2 7.9E-11 2.7E-15 117.1 15.5 141 90-242 3-210 (501)
62 4a5l_A Thioredoxin reductase; 99.2 1.6E-11 5.5E-16 113.8 8.8 118 90-242 4-121 (314)
63 2rgh_A Alpha-glycerophosphate 99.2 1.8E-10 6.1E-15 116.5 17.1 65 168-242 186-250 (571)
64 3gwf_A Cyclohexanone monooxyge 99.2 1.5E-10 5.2E-15 116.1 15.7 130 90-242 8-147 (540)
65 2bry_A NEDD9 interacting prote 99.2 4E-11 1.4E-15 119.2 11.2 135 89-244 91-232 (497)
66 4b1b_A TRXR, thioredoxin reduc 99.2 1.4E-11 4.7E-16 123.6 7.8 138 90-242 42-197 (542)
67 2pyx_A Tryptophan halogenase; 99.2 2.2E-10 7.5E-15 114.6 16.3 65 165-244 170-235 (526)
68 3c4n_A Uncharacterized protein 99.2 2.6E-11 8.8E-16 117.3 9.0 136 90-242 36-236 (405)
69 2gv8_A Monooxygenase; FMO, FAD 99.2 1.1E-10 3.7E-15 114.3 13.6 140 90-243 6-178 (447)
70 3qfa_A Thioredoxin reductase 1 99.2 3.8E-11 1.3E-15 120.0 10.4 137 89-242 31-185 (519)
71 2dkh_A 3-hydroxybenzoate hydro 99.2 1.9E-10 6.4E-15 117.8 15.6 139 90-243 32-212 (639)
72 3s5w_A L-ornithine 5-monooxyge 99.2 4.8E-11 1.6E-15 117.1 10.5 137 89-242 29-192 (463)
73 3axb_A Putative oxidoreductase 99.2 8.7E-11 3E-15 114.8 12.2 59 168-242 179-254 (448)
74 3lzw_A Ferredoxin--NADP reduct 99.2 8.3E-11 2.8E-15 109.5 11.4 116 90-241 7-122 (332)
75 3ab1_A Ferredoxin--NADP reduct 99.2 1.1E-10 3.8E-15 110.6 12.4 118 90-242 14-131 (360)
76 4dgk_A Phytoene dehydrogenase; 99.2 1.5E-10 5.2E-15 114.6 13.5 56 171-241 222-277 (501)
77 3f8d_A Thioredoxin reductase ( 99.2 1.2E-10 4.1E-15 107.9 12.0 111 90-242 15-125 (323)
78 3dgz_A Thioredoxin reductase 2 99.2 5.6E-11 1.9E-15 117.8 10.3 136 90-242 6-159 (488)
79 2aqj_A Tryptophan halogenase, 99.2 3.9E-10 1.3E-14 113.1 15.2 64 165-244 160-224 (538)
80 3dgh_A TRXR-1, thioredoxin red 99.2 9.1E-11 3.1E-15 116.1 10.4 136 89-242 8-162 (483)
81 3qvp_A Glucose oxidase; oxidor 99.2 1.1E-10 3.7E-15 118.0 11.1 56 177-242 233-293 (583)
82 2zbw_A Thioredoxin reductase; 99.1 2.4E-10 8E-15 107.0 12.4 116 90-241 5-120 (335)
83 3urh_A Dihydrolipoyl dehydroge 99.1 1.5E-10 5.2E-15 114.7 11.5 135 90-241 25-169 (491)
84 3uox_A Otemo; baeyer-villiger 99.1 1.5E-10 5E-15 116.4 11.2 134 89-242 8-147 (545)
85 4hb9_A Similarities with proba 99.1 3E-10 1E-14 108.8 13.0 129 91-243 2-167 (412)
86 2e4g_A Tryptophan halogenase; 99.1 6.2E-10 2.1E-14 112.0 15.7 65 165-244 189-254 (550)
87 1yvv_A Amine oxidase, flavin-c 99.1 5.7E-10 1.9E-14 104.3 14.4 134 90-242 2-162 (336)
88 1ojt_A Surface protein; redox- 99.1 6.1E-11 2.1E-15 117.3 7.4 144 90-242 6-160 (482)
89 3k7m_X 6-hydroxy-L-nicotine ox 99.1 5E-10 1.7E-14 108.6 13.7 40 91-131 2-41 (431)
90 2weu_A Tryptophan 5-halogenase 99.1 4.2E-10 1.4E-14 111.9 13.4 64 165-244 168-232 (511)
91 3nrn_A Uncharacterized protein 99.1 6.4E-10 2.2E-14 107.7 14.3 38 92-130 2-39 (421)
92 3itj_A Thioredoxin reductase 1 99.1 1.9E-10 6.7E-15 107.3 9.8 117 90-242 22-142 (338)
93 3l8k_A Dihydrolipoyl dehydroge 99.1 9.1E-11 3.1E-15 115.6 7.9 134 90-241 4-143 (466)
94 1pn0_A Phenol 2-monooxygenase; 99.1 4.6E-10 1.6E-14 115.4 13.2 104 90-201 8-152 (665)
95 2q7v_A Thioredoxin reductase; 99.1 3.3E-10 1.1E-14 105.7 11.0 114 90-242 8-123 (325)
96 2q0l_A TRXR, thioredoxin reduc 99.1 6.8E-10 2.3E-14 102.7 13.0 112 91-242 2-114 (311)
97 3o0h_A Glutathione reductase; 99.1 7E-10 2.4E-14 109.7 13.0 132 89-242 25-166 (484)
98 3qj4_A Renalase; FAD/NAD(P)-bi 99.1 6.5E-10 2.2E-14 104.7 11.9 130 91-240 2-163 (342)
99 3cty_A Thioredoxin reductase; 99.1 1.2E-09 4.1E-14 101.6 13.4 111 90-242 16-126 (319)
100 1vdc_A NTR, NADPH dependent th 99.1 2.5E-10 8.4E-15 106.8 8.6 113 90-242 8-124 (333)
101 4ap3_A Steroid monooxygenase; 99.1 9.6E-10 3.3E-14 110.5 13.2 130 90-242 21-159 (549)
102 3fbs_A Oxidoreductase; structu 99.1 1.3E-09 4.3E-14 99.8 12.8 110 91-242 3-112 (297)
103 1dxl_A Dihydrolipoamide dehydr 99.1 1.2E-10 4.2E-15 114.6 6.1 135 90-242 6-151 (470)
104 3dk9_A Grase, GR, glutathione 99.0 3.2E-10 1.1E-14 112.0 8.9 132 89-242 19-160 (478)
105 2ywl_A Thioredoxin reductase r 99.0 9E-10 3.1E-14 93.9 10.6 109 91-242 2-110 (180)
106 2eq6_A Pyruvate dehydrogenase 99.0 9.3E-11 3.2E-15 115.5 4.9 129 90-242 6-143 (464)
107 3d1c_A Flavin-containing putat 99.0 5.2E-10 1.8E-14 106.0 9.6 131 90-243 4-144 (369)
108 2qae_A Lipoamide, dihydrolipoy 99.0 1.7E-10 5.8E-15 113.6 5.9 134 90-241 2-147 (468)
109 3lxd_A FAD-dependent pyridine 99.0 7.5E-09 2.6E-13 100.2 17.5 56 172-242 196-251 (415)
110 1w4x_A Phenylacetone monooxyge 99.0 2.3E-09 8E-14 107.5 14.2 130 90-243 16-155 (542)
111 1v59_A Dihydrolipoamide dehydr 99.0 6.2E-10 2.1E-14 109.8 9.6 132 90-242 5-157 (478)
112 1ebd_A E3BD, dihydrolipoamide 99.0 1.8E-09 6.2E-14 105.8 12.9 133 90-242 3-145 (455)
113 1zmd_A Dihydrolipoyl dehydroge 99.0 1.8E-10 6.2E-15 113.6 5.6 135 90-242 6-152 (474)
114 2a87_A TRXR, TR, thioredoxin r 99.0 9.9E-10 3.4E-14 103.0 10.3 113 89-242 13-126 (335)
115 1fl2_A Alkyl hydroperoxide red 99.0 2E-09 6.7E-14 99.5 12.1 112 91-242 2-115 (310)
116 1trb_A Thioredoxin reductase; 99.0 1.2E-09 4E-14 101.4 10.5 112 90-242 5-116 (320)
117 3r9u_A Thioredoxin reductase; 99.0 1.2E-09 4E-14 100.9 10.1 111 90-241 4-117 (315)
118 3q9t_A Choline dehydrogenase a 99.0 7E-10 2.4E-14 112.0 9.0 51 182-242 217-270 (577)
119 3lad_A Dihydrolipoamide dehydr 99.0 6.1E-10 2.1E-14 109.8 8.4 135 90-241 3-153 (476)
120 2xve_A Flavin-containing monoo 99.0 9.3E-10 3.2E-14 108.4 9.4 139 91-242 3-166 (464)
121 1lvl_A Dihydrolipoamide dehydr 99.0 6.6E-10 2.3E-14 109.2 8.3 130 90-242 5-146 (458)
122 3t37_A Probable dehydrogenase; 99.0 3.7E-10 1.3E-14 112.7 6.3 54 178-242 218-271 (526)
123 3ic9_A Dihydrolipoamide dehydr 99.0 7.5E-10 2.6E-14 109.9 8.5 53 90-144 8-60 (492)
124 4dna_A Probable glutathione re 99.0 7.2E-10 2.5E-14 109.0 7.9 130 90-241 5-144 (463)
125 1fec_A Trypanothione reductase 99.0 3E-10 1E-14 112.6 5.2 138 90-242 3-163 (490)
126 1onf_A GR, grase, glutathione 99.0 2.6E-10 8.9E-15 113.4 4.5 52 90-143 2-53 (500)
127 1zk7_A HGII, reductase, mercur 99.0 3E-09 1E-13 104.6 12.1 134 90-241 4-149 (467)
128 2hqm_A GR, grase, glutathione 98.9 3.5E-10 1.2E-14 111.9 4.7 135 89-242 10-160 (479)
129 2a8x_A Dihydrolipoyl dehydroge 98.9 2.5E-09 8.7E-14 105.1 10.8 133 90-242 3-146 (464)
130 2yqu_A 2-oxoglutarate dehydrog 98.9 1.2E-09 4.1E-14 107.2 8.1 51 91-142 2-52 (455)
131 3nks_A Protoporphyrinogen oxid 98.9 3E-09 1E-13 104.5 10.7 39 91-130 3-43 (477)
132 1xdi_A RV3303C-LPDA; reductase 98.9 2.5E-09 8.5E-14 106.2 9.8 53 90-143 2-56 (499)
133 2r9z_A Glutathione amide reduc 98.9 4.4E-09 1.5E-13 103.4 11.0 129 90-242 4-142 (463)
134 1hyu_A AHPF, alkyl hydroperoxi 98.9 7.6E-09 2.6E-13 103.3 12.7 115 88-242 210-326 (521)
135 3i6d_A Protoporphyrinogen oxid 98.9 6.1E-09 2.1E-13 101.7 11.7 40 90-130 5-50 (470)
136 1mo9_A ORF3; nucleotide bindin 98.9 3.5E-09 1.2E-13 105.8 9.8 130 89-242 42-186 (523)
137 2wpf_A Trypanothione reductase 98.9 5.9E-10 2E-14 110.7 4.0 139 90-242 7-167 (495)
138 1ges_A Glutathione reductase; 98.9 6.3E-09 2.2E-13 101.9 11.1 53 90-144 4-56 (450)
139 3kkj_A Amine oxidase, flavin-c 98.9 1.3E-09 4.3E-14 96.6 5.2 40 90-130 2-41 (336)
140 1c0p_A D-amino acid oxidase; a 98.9 1.9E-09 6.6E-14 102.2 6.5 36 90-126 6-41 (363)
141 3p1w_A Rabgdi protein; GDI RAB 98.9 1.6E-08 5.4E-13 99.5 12.8 39 90-129 20-58 (475)
142 2ivd_A PPO, PPOX, protoporphyr 98.9 1.9E-08 6.4E-13 98.8 13.4 42 88-130 14-55 (478)
143 1s3e_A Amine oxidase [flavin-c 98.8 2.9E-08 9.8E-13 98.9 13.8 40 90-130 4-43 (520)
144 3c4a_A Probable tryptophan hyd 98.8 8.7E-10 3E-14 105.5 2.5 124 92-243 2-144 (381)
145 2x8g_A Thioredoxin glutathione 98.8 8.4E-09 2.9E-13 104.7 9.9 137 88-242 105-261 (598)
146 2vvm_A Monoamine oxidase N; FA 98.8 4.3E-08 1.5E-12 96.8 14.5 40 90-130 39-78 (495)
147 3g3e_A D-amino-acid oxidase; F 98.8 9.8E-10 3.4E-14 103.7 2.4 38 92-130 2-45 (351)
148 3fim_B ARYL-alcohol oxidase; A 98.8 8.7E-09 3E-13 103.8 8.1 37 90-126 2-38 (566)
149 1y56_A Hypothetical protein PH 98.7 2.8E-08 9.5E-13 98.5 10.0 112 90-242 108-219 (493)
150 4b63_A L-ornithine N5 monooxyg 98.7 9.2E-08 3.1E-12 95.0 13.7 137 90-241 39-213 (501)
151 2gag_A Heterotetrameric sarcos 98.7 7.2E-08 2.5E-12 103.0 13.2 124 90-241 128-252 (965)
152 3pl8_A Pyranose 2-oxidase; sub 98.7 3.4E-08 1.2E-12 100.6 10.2 38 90-128 46-83 (623)
153 3iwa_A FAD-dependent pyridine 98.7 4.5E-08 1.5E-12 96.3 9.8 120 91-241 4-124 (472)
154 3oc4_A Oxidoreductase, pyridin 98.7 3.5E-08 1.2E-12 96.6 8.6 112 91-242 3-115 (452)
155 3lov_A Protoporphyrinogen oxid 98.7 8.2E-08 2.8E-12 94.2 11.3 39 90-129 4-44 (475)
156 4gut_A Lysine-specific histone 98.7 4.1E-08 1.4E-12 102.3 9.1 38 90-128 336-373 (776)
157 3kd9_A Coenzyme A disulfide re 98.6 4.7E-08 1.6E-12 95.6 8.3 110 90-241 3-113 (449)
158 1ju2_A HydroxynitrIle lyase; f 98.6 2.2E-08 7.6E-13 100.3 6.1 35 89-125 25-59 (536)
159 3ihm_A Styrene monooxygenase A 98.6 1.6E-08 5.6E-13 98.4 4.7 34 90-124 22-55 (430)
160 3k30_A Histamine dehydrogenase 98.6 2.1E-08 7E-13 103.6 5.5 41 90-131 391-431 (690)
161 1kdg_A CDH, cellobiose dehydro 98.6 4.6E-08 1.6E-12 98.1 7.6 59 175-242 200-261 (546)
162 3ics_A Coenzyme A-disulfide re 98.6 7E-08 2.4E-12 97.6 8.3 115 90-241 36-151 (588)
163 4eqs_A Coenzyme A disulfide re 98.6 1.3E-08 4.6E-13 99.3 2.7 113 92-242 2-116 (437)
164 3cgb_A Pyridine nucleotide-dis 98.6 6.7E-08 2.3E-12 95.4 7.7 115 91-242 37-152 (480)
165 3g5s_A Methylenetetrahydrofola 98.6 2.3E-07 8E-12 88.4 10.9 100 91-191 2-119 (443)
166 2jbv_A Choline oxidase; alcoho 98.6 2.3E-07 7.9E-12 93.1 11.6 58 176-242 214-273 (546)
167 1gpe_A Protein (glucose oxidas 98.6 2.2E-07 7.5E-12 94.1 10.6 36 89-125 23-59 (587)
168 3klj_A NAD(FAD)-dependent dehy 98.6 1.1E-07 3.9E-12 91.2 8.0 108 89-241 8-115 (385)
169 1q1r_A Putidaredoxin reductase 98.5 2.7E-07 9.2E-12 89.8 10.7 109 90-242 4-114 (431)
170 2v3a_A Rubredoxin reductase; a 98.5 1.1E-07 3.7E-12 91.0 7.6 108 90-242 4-113 (384)
171 4gde_A UDP-galactopyranose mut 98.5 4.7E-08 1.6E-12 96.6 5.0 41 89-130 9-50 (513)
172 2bc0_A NADH oxidase; flavoprot 98.5 7.5E-08 2.6E-12 95.3 6.4 112 90-242 35-149 (490)
173 1xhc_A NADH oxidase /nitrite r 98.5 2.9E-07 9.8E-12 87.7 9.8 106 90-242 8-113 (367)
174 3ntd_A FAD-dependent pyridine 98.5 1E-07 3.6E-12 95.7 7.1 114 91-241 2-116 (565)
175 1nhp_A NADH peroxidase; oxidor 98.5 1.2E-07 4E-12 92.7 7.0 114 91-242 1-115 (447)
176 2cdu_A NADPH oxidase; flavoenz 98.5 4E-07 1.4E-11 89.0 10.8 114 91-242 1-117 (452)
177 3sx6_A Sulfide-quinone reducta 98.5 2.8E-07 9.7E-12 89.7 8.6 105 91-242 5-112 (437)
178 3fg2_P Putative rubredoxin red 98.5 1.9E-06 6.5E-11 82.9 14.0 98 91-241 143-240 (404)
179 2vdc_G Glutamate synthase [NAD 98.5 6.7E-08 2.3E-12 94.9 3.6 39 89-128 121-159 (456)
180 3h8l_A NADH oxidase; membrane 98.4 7.9E-08 2.7E-12 92.7 3.4 109 91-242 2-113 (409)
181 2gqw_A Ferredoxin reductase; f 98.4 4.5E-07 1.5E-11 87.6 8.4 105 90-242 7-113 (408)
182 1nhp_A NADH peroxidase; oxidor 98.4 1.5E-06 5.2E-11 84.7 12.2 98 90-242 149-246 (447)
183 1ps9_A 2,4-dienoyl-COA reducta 98.4 2.7E-07 9.3E-12 94.8 7.2 39 90-129 373-411 (671)
184 2bcg_G Secretory pathway GDP d 98.4 1.9E-07 6.7E-12 91.4 5.6 41 89-130 10-50 (453)
185 1trb_A Thioredoxin reductase; 98.4 4.3E-06 1.5E-10 77.1 14.2 101 91-241 146-246 (320)
186 1n4w_A CHOD, cholesterol oxida 98.4 6.2E-07 2.1E-11 89.1 8.8 35 90-125 5-39 (504)
187 3fg2_P Putative rubredoxin red 98.4 3.8E-07 1.3E-11 87.9 6.8 106 91-241 2-109 (404)
188 3ef6_A Toluene 1,2-dioxygenase 98.4 2.9E-07 9.9E-12 88.9 5.9 106 91-241 3-110 (410)
189 2v3a_A Rubredoxin reductase; a 98.4 4.4E-06 1.5E-10 79.7 13.7 98 91-242 146-243 (384)
190 2b9w_A Putative aminooxidase; 98.4 3.5E-07 1.2E-11 88.3 5.9 41 89-130 5-46 (424)
191 3h28_A Sulfide-quinone reducta 98.3 9.2E-07 3.1E-11 85.8 8.5 104 91-241 3-108 (430)
192 1rsg_A FMS1 protein; FAD bindi 98.3 2.7E-07 9.2E-12 91.8 4.5 41 89-130 7-48 (516)
193 1q1r_A Putidaredoxin reductase 98.3 3.9E-06 1.3E-10 81.5 12.6 98 91-241 150-249 (431)
194 2eq6_A Pyruvate dehydrogenase 98.3 8.5E-06 2.9E-10 79.9 14.7 102 91-242 170-271 (464)
195 2cdu_A NADPH oxidase; flavoenz 98.3 5.4E-06 1.8E-10 80.9 13.2 98 91-242 150-247 (452)
196 1v0j_A UDP-galactopyranose mut 98.3 3.7E-07 1.3E-11 87.9 4.8 42 90-131 7-48 (399)
197 1m6i_A Programmed cell death p 98.3 3.4E-07 1.1E-11 90.7 4.4 128 90-242 11-144 (493)
198 1cjc_A Protein (adrenodoxin re 98.3 1.4E-07 4.7E-12 92.8 1.5 38 90-128 6-45 (460)
199 2yqu_A 2-oxoglutarate dehydrog 98.3 4.5E-06 1.5E-10 81.5 12.3 98 91-243 168-265 (455)
200 2yg5_A Putrescine oxidase; oxi 98.3 4.7E-07 1.6E-11 88.2 4.9 40 90-130 5-44 (453)
201 1gte_A Dihydropyrimidine dehyd 98.3 3.3E-07 1.1E-11 98.6 3.9 39 90-129 187-226 (1025)
202 4g6h_A Rotenone-insensitive NA 98.3 3.8E-06 1.3E-10 83.4 11.2 123 90-242 42-169 (502)
203 3hyw_A Sulfide-quinone reducta 98.3 1.5E-06 5E-11 84.5 8.1 105 92-242 4-109 (430)
204 1ges_A Glutathione reductase; 98.3 5.1E-06 1.7E-10 81.2 11.8 98 91-242 168-265 (450)
205 1ebd_A E3BD, dihydrolipoamide 98.3 1.1E-05 3.7E-10 78.8 14.1 101 90-242 170-270 (455)
206 2jae_A L-amino acid oxidase; o 98.2 8.4E-07 2.9E-11 87.3 6.0 40 90-130 11-50 (489)
207 3oc4_A Oxidoreductase, pyridin 98.2 1.1E-05 3.8E-10 78.7 13.4 97 91-242 148-244 (452)
208 1v59_A Dihydrolipoamide dehydr 98.2 1.2E-05 4E-10 79.0 13.4 103 91-242 184-287 (478)
209 3itj_A Thioredoxin reductase 1 98.2 1.2E-05 4.1E-10 74.4 12.7 98 90-241 173-270 (338)
210 2bc0_A NADH oxidase; flavoprot 98.2 8.3E-06 2.9E-10 80.5 12.2 96 91-241 195-290 (490)
211 1fl2_A Alkyl hydroperoxide red 98.2 1.3E-05 4.6E-10 73.5 12.9 97 91-241 145-241 (310)
212 3hdq_A UDP-galactopyranose mut 98.2 1E-06 3.5E-11 84.8 5.3 41 90-131 29-69 (397)
213 3cgb_A Pyridine nucleotide-dis 98.2 8.9E-06 3.1E-10 80.1 12.1 96 90-241 186-281 (480)
214 2r9z_A Glutathione amide reduc 98.2 1.4E-05 4.9E-10 78.3 13.5 97 91-242 167-264 (463)
215 2q0l_A TRXR, thioredoxin reduc 98.2 2.5E-05 8.5E-10 71.7 14.3 98 90-241 143-240 (311)
216 2e1m_A L-glutamate oxidase; L- 98.2 1.3E-06 4.3E-11 83.5 5.6 42 89-131 43-85 (376)
217 3iwa_A FAD-dependent pyridine 98.2 1.8E-05 6.2E-10 77.6 14.1 98 91-241 160-257 (472)
218 3ntd_A FAD-dependent pyridine 98.2 1.8E-05 6E-10 79.4 14.1 96 91-241 152-266 (565)
219 2gqw_A Ferredoxin reductase; f 98.2 1.4E-05 4.9E-10 76.9 12.9 93 91-241 146-238 (408)
220 1i8t_A UDP-galactopyranose mut 98.2 1.1E-06 3.9E-11 83.6 4.9 40 91-131 2-41 (367)
221 3ef6_A Toluene 1,2-dioxygenase 98.2 4.9E-06 1.7E-10 80.2 9.2 97 91-241 144-240 (410)
222 4dsg_A UDP-galactopyranose mut 98.2 1.5E-06 5.1E-11 85.9 5.4 42 88-130 7-49 (484)
223 1lqt_A FPRA; NADP+ derivative, 98.1 6.7E-07 2.3E-11 87.7 2.4 39 90-128 3-47 (456)
224 3vrd_B FCCB subunit, flavocyto 98.1 4.6E-06 1.6E-10 79.9 8.2 102 92-241 4-107 (401)
225 2hqm_A GR, grase, glutathione 98.1 1.5E-05 5.1E-10 78.4 12.0 99 91-242 186-285 (479)
226 1zmd_A Dihydrolipoyl dehydroge 98.1 2.4E-05 8.2E-10 76.8 13.4 104 91-242 179-282 (474)
227 1vdc_A NTR, NADPH dependent th 98.1 2.7E-05 9.4E-10 72.1 13.1 98 91-242 160-259 (333)
228 1onf_A GR, grase, glutathione 98.1 2.1E-05 7.2E-10 77.8 12.5 99 91-243 177-276 (500)
229 3r9u_A Thioredoxin reductase; 98.1 2.6E-05 8.8E-10 71.4 12.3 96 91-241 148-243 (315)
230 2zbw_A Thioredoxin reductase; 98.1 4.2E-05 1.4E-09 71.0 13.9 166 91-328 153-319 (335)
231 3urh_A Dihydrolipoyl dehydroge 98.1 3.7E-05 1.3E-09 75.8 14.2 102 91-242 199-300 (491)
232 1sez_A Protoporphyrinogen oxid 98.1 2.5E-06 8.6E-11 84.2 5.7 40 90-130 13-52 (504)
233 2a8x_A Dihydrolipoyl dehydroge 98.1 2.8E-05 9.7E-10 76.0 13.0 100 91-242 172-271 (464)
234 3ab1_A Ferredoxin--NADP reduct 98.1 2E-05 6.7E-10 74.2 11.5 167 91-328 164-330 (360)
235 2bi7_A UDP-galactopyranose mut 98.1 2.8E-06 9.6E-11 81.4 5.5 40 90-130 3-42 (384)
236 2q7v_A Thioredoxin reductase; 98.1 3.8E-05 1.3E-09 71.1 13.0 96 91-241 153-248 (325)
237 1ojt_A Surface protein; redox- 98.1 2.3E-05 8E-10 77.1 11.8 100 91-241 186-285 (482)
238 3cty_A Thioredoxin reductase; 98.0 2.5E-05 8.5E-10 72.1 11.2 96 91-241 156-251 (319)
239 3ics_A Coenzyme A-disulfide re 98.0 3.9E-05 1.3E-09 77.4 13.4 94 91-241 188-281 (588)
240 3ic9_A Dihydrolipoamide dehydr 98.0 5.8E-05 2E-09 74.5 14.3 100 91-242 175-274 (492)
241 1mo9_A ORF3; nucleotide bindin 98.0 3.7E-05 1.3E-09 76.5 13.0 98 91-242 215-316 (523)
242 1d5t_A Guanine nucleotide diss 98.0 4E-06 1.4E-10 81.5 5.8 40 90-130 6-45 (433)
243 3o0h_A Glutathione reductase; 98.0 3.1E-05 1.1E-09 76.2 12.1 97 91-242 192-288 (484)
244 1zk7_A HGII, reductase, mercur 98.0 4.1E-05 1.4E-09 74.9 12.9 95 91-242 177-271 (467)
245 1dxl_A Dihydrolipoamide dehydr 98.0 2.4E-05 8.3E-10 76.6 11.1 102 91-242 178-279 (470)
246 3lad_A Dihydrolipoamide dehydr 98.0 5.7E-05 2E-09 74.0 13.5 99 91-241 181-279 (476)
247 2qae_A Lipoamide, dihydrolipoy 98.0 5.6E-05 1.9E-09 74.0 13.4 101 91-242 175-276 (468)
248 1m6i_A Programmed cell death p 98.0 5.9E-05 2E-09 74.5 13.6 98 91-242 181-282 (493)
249 1lvl_A Dihydrolipoamide dehydr 98.0 2.2E-05 7.4E-10 76.8 10.4 97 91-242 172-268 (458)
250 1xdi_A RV3303C-LPDA; reductase 98.0 3.9E-05 1.3E-09 75.9 12.1 97 91-242 183-279 (499)
251 4dna_A Probable glutathione re 98.0 4.2E-05 1.4E-09 74.8 11.9 98 90-242 170-268 (463)
252 3lzw_A Ferredoxin--NADP reduct 98.0 0.00011 3.7E-09 67.7 14.0 164 91-329 155-318 (332)
253 3dgh_A TRXR-1, thioredoxin red 98.0 5.7E-05 2E-09 74.3 12.5 101 91-241 188-288 (483)
254 1fec_A Trypanothione reductase 98.0 4.5E-05 1.6E-09 75.3 11.8 99 91-242 188-288 (490)
255 4b1b_A TRXR, thioredoxin reduc 97.9 5E-05 1.7E-09 75.9 11.9 96 91-242 224-319 (542)
256 2iid_A L-amino-acid oxidase; f 97.9 5.5E-06 1.9E-10 81.7 4.8 41 89-130 32-72 (498)
257 2wpf_A Trypanothione reductase 97.9 5.6E-05 1.9E-09 74.7 12.1 98 91-241 192-291 (495)
258 3s5w_A L-ornithine 5-monooxyge 97.9 0.00016 5.6E-09 70.3 15.1 140 90-242 227-377 (463)
259 3kd9_A Coenzyme A disulfide re 97.9 5.7E-05 2E-09 73.5 11.7 95 91-241 149-243 (449)
260 3dk9_A Grase, GR, glutathione 97.9 0.00011 3.8E-09 72.0 13.8 103 91-242 188-293 (478)
261 1xhc_A NADH oxidase /nitrite r 97.9 3.2E-05 1.1E-09 73.4 9.5 90 91-241 144-233 (367)
262 3f8d_A Thioredoxin reductase ( 97.9 8.4E-05 2.9E-09 68.1 11.9 164 90-326 154-317 (323)
263 1hyu_A AHPF, alkyl hydroperoxi 97.9 6.6E-05 2.3E-09 74.7 11.8 97 91-241 356-452 (521)
264 3dgz_A Thioredoxin reductase 2 97.9 9.1E-05 3.1E-09 72.9 12.4 101 91-241 186-286 (488)
265 2a87_A TRXR, TR, thioredoxin r 97.9 8E-05 2.8E-09 69.2 11.1 97 91-242 156-252 (335)
266 1b37_A Protein (polyamine oxid 97.9 1E-05 3.4E-10 79.4 5.0 40 90-130 4-44 (472)
267 1o94_A Tmadh, trimethylamine d 97.7 2.7E-05 9.4E-10 80.7 5.7 40 90-130 389-428 (729)
268 4a5l_A Thioredoxin reductase; 97.7 0.00045 1.5E-08 63.2 13.0 97 91-241 153-249 (314)
269 3qfa_A Thioredoxin reductase 1 97.7 0.00045 1.5E-08 68.6 13.8 101 91-242 211-315 (519)
270 2z3y_A Lysine-specific histone 97.7 3.3E-05 1.1E-09 79.2 5.3 39 90-129 107-145 (662)
271 3l8k_A Dihydrolipoyl dehydroge 97.6 0.00036 1.2E-08 68.2 12.3 99 91-242 173-272 (466)
272 3d1c_A Flavin-containing putat 97.6 0.00042 1.4E-08 64.9 11.8 104 91-242 167-272 (369)
273 2xag_A Lysine-specific histone 97.6 5.2E-05 1.8E-09 79.7 5.6 39 90-129 278-316 (852)
274 4eqs_A Coenzyme A disulfide re 97.6 0.00014 4.8E-09 70.7 8.3 92 91-241 148-239 (437)
275 3klj_A NAD(FAD)-dependent dehy 97.6 4.9E-05 1.7E-09 72.7 4.8 84 91-241 147-230 (385)
276 2x8g_A Thioredoxin glutathione 97.5 0.00097 3.3E-08 67.3 14.2 99 91-241 287-394 (598)
277 1vg0_A RAB proteins geranylger 97.5 9.9E-05 3.4E-09 74.9 5.5 40 90-130 8-47 (650)
278 4g6h_A Rotenone-insensitive NA 97.5 0.00045 1.5E-08 68.4 10.1 100 92-242 219-332 (502)
279 1coy_A Cholesterol oxidase; ox 97.4 0.00011 3.8E-09 72.8 4.7 35 89-124 10-44 (507)
280 4gcm_A TRXR, thioredoxin reduc 97.3 0.0038 1.3E-07 57.1 13.7 97 91-241 146-242 (312)
281 1gte_A Dihydropyrimidine dehyd 97.2 0.00099 3.4E-08 71.6 10.2 104 92-241 334-441 (1025)
282 2gag_A Heterotetrameric sarcos 97.2 0.001 3.4E-08 71.1 9.8 162 91-329 285-447 (965)
283 2vdc_G Glutamate synthase [NAD 97.2 0.0006 2.1E-08 66.6 7.3 105 91-240 265-376 (456)
284 3ayj_A Pro-enzyme of L-phenyla 97.1 0.00015 5.1E-09 74.5 2.6 36 90-126 56-100 (721)
285 3fbs_A Oxidoreductase; structu 97.1 0.00059 2E-08 61.6 6.2 85 90-241 141-225 (297)
286 1cjc_A Protein (adrenodoxin re 97.1 0.0041 1.4E-07 60.7 12.4 58 184-243 270-334 (460)
287 1lqt_A FPRA; NADP+ derivative, 96.7 0.0075 2.6E-07 58.8 10.3 34 91-124 148-201 (456)
288 1o94_A Tmadh, trimethylamine d 96.7 0.0028 9.6E-08 65.5 7.4 33 91-124 529-563 (729)
289 3gwf_A Cyclohexanone monooxyge 96.6 0.0047 1.6E-07 61.6 8.4 34 91-125 179-212 (540)
290 3uox_A Otemo; baeyer-villiger 96.5 0.002 6.8E-08 64.4 4.9 34 91-125 186-219 (545)
291 1ps9_A 2,4-dienoyl-COA reducta 96.5 0.012 4.2E-07 60.0 10.7 28 91-119 495-522 (671)
292 2xve_A Flavin-containing monoo 96.5 0.0069 2.4E-07 59.1 8.4 34 91-125 198-231 (464)
293 2gv8_A Monooxygenase; FMO, FAD 96.4 0.006 2.1E-07 59.0 7.8 34 90-124 212-246 (447)
294 4fk1_A Putative thioredoxin re 96.3 0.014 4.7E-07 53.2 8.7 90 91-243 147-237 (304)
295 4a9w_A Monooxygenase; baeyer-v 96.2 0.017 5.7E-07 53.2 9.1 32 91-124 164-195 (357)
296 4ap3_A Steroid monooxygenase; 96.1 0.017 5.9E-07 57.6 9.3 34 91-125 192-225 (549)
297 3h8l_A NADH oxidase; membrane 95.5 0.038 1.3E-06 52.5 8.7 51 172-242 220-270 (409)
298 3sx6_A Sulfide-quinone reducta 95.5 0.061 2.1E-06 51.7 10.1 104 92-242 151-269 (437)
299 3h28_A Sulfide-quinone reducta 94.9 0.036 1.2E-06 53.2 6.4 50 176-241 206-255 (430)
300 2g1u_A Hypothetical protein TM 94.7 0.036 1.2E-06 45.2 5.1 33 91-124 20-52 (155)
301 3llv_A Exopolyphosphatase-rela 94.7 0.034 1.2E-06 44.4 4.8 33 91-124 7-39 (141)
302 1lss_A TRK system potassium up 94.6 0.036 1.2E-06 43.8 4.8 33 91-124 5-37 (140)
303 3fwz_A Inner membrane protein 94.4 0.051 1.7E-06 43.5 5.3 33 91-124 8-40 (140)
304 1id1_A Putative potassium chan 94.2 0.057 1.9E-06 43.9 5.1 32 91-123 4-35 (153)
305 3ic5_A Putative saccharopine d 93.7 0.07 2.4E-06 40.7 4.6 33 91-124 6-39 (118)
306 2hmt_A YUAA protein; RCK, KTN, 93.7 0.059 2E-06 42.6 4.3 32 92-124 8-39 (144)
307 1pzg_A LDH, lactate dehydrogen 92.9 0.088 3E-06 48.9 4.6 34 90-124 9-43 (331)
308 3lk7_A UDP-N-acetylmuramoylala 92.9 0.09 3.1E-06 50.9 4.9 33 91-124 10-42 (451)
309 2bcg_G Secretory pathway GDP d 92.8 0.15 5.3E-06 49.2 6.4 58 169-242 241-300 (453)
310 3ado_A Lambda-crystallin; L-gu 92.7 0.086 2.9E-06 48.7 4.2 33 91-124 7-39 (319)
311 3hyw_A Sulfide-quinone reducta 92.5 0.94 3.2E-05 43.2 11.4 46 182-242 211-256 (430)
312 1d5t_A Guanine nucleotide diss 92.1 0.12 4.1E-06 49.7 4.6 58 169-242 233-290 (433)
313 4b63_A L-ornithine N5 monooxyg 92.0 1.4 4.7E-05 43.1 12.2 34 91-124 247-281 (501)
314 3dfz_A SIRC, precorrin-2 dehyd 91.7 0.15 5.1E-06 44.6 4.3 33 90-123 31-63 (223)
315 3l4b_C TRKA K+ channel protien 91.7 0.14 4.7E-06 44.2 4.1 32 92-124 2-33 (218)
316 3i83_A 2-dehydropantoate 2-red 91.6 0.17 5.7E-06 46.6 4.8 33 91-124 3-35 (320)
317 3lxd_A FAD-dependent pyridine 91.4 0.19 6.4E-06 47.8 5.1 35 91-126 153-187 (415)
318 4e12_A Diketoreductase; oxidor 91.3 0.17 5.7E-06 45.7 4.4 33 91-124 5-37 (283)
319 3hn2_A 2-dehydropantoate 2-red 90.8 0.18 6.1E-06 46.2 4.1 33 91-124 3-35 (312)
320 2dpo_A L-gulonate 3-dehydrogen 90.6 0.22 7.4E-06 46.0 4.5 33 91-124 7-39 (319)
321 1coy_A Cholesterol oxidase; ox 90.6 0.47 1.6E-05 46.6 7.1 60 176-242 232-293 (507)
322 1kyq_A Met8P, siroheme biosynt 90.5 0.16 5.4E-06 45.9 3.4 34 90-124 13-46 (274)
323 1f0y_A HCDH, L-3-hydroxyacyl-C 90.3 0.29 1E-05 44.4 5.1 32 92-124 17-48 (302)
324 1jw9_B Molybdopterin biosynthe 90.2 0.21 7.3E-06 44.3 3.9 34 90-124 31-65 (249)
325 4g65_A TRK system potassium up 90.2 0.21 7.3E-06 48.5 4.2 33 91-124 4-36 (461)
326 4dio_A NAD(P) transhydrogenase 90.1 0.29 1E-05 46.6 5.0 35 89-124 189-223 (405)
327 2hjr_A Malate dehydrogenase; m 90.1 0.3 1E-05 45.2 5.0 33 91-124 15-48 (328)
328 3ghy_A Ketopantoate reductase 90.1 0.28 9.5E-06 45.4 4.8 32 91-123 4-35 (335)
329 1lld_A L-lactate dehydrogenase 90.0 0.28 9.7E-06 44.8 4.8 33 91-124 8-42 (319)
330 2x5o_A UDP-N-acetylmuramoylala 89.8 0.22 7.4E-06 48.0 3.9 35 91-126 6-40 (439)
331 3oj0_A Glutr, glutamyl-tRNA re 89.6 0.22 7.4E-06 39.9 3.2 33 91-124 22-54 (144)
332 1ks9_A KPA reductase;, 2-dehyd 89.6 0.34 1.1E-05 43.3 4.8 32 92-124 2-33 (291)
333 2a9f_A Putative malic enzyme ( 89.2 0.3 1E-05 46.2 4.2 35 89-124 187-222 (398)
334 4ezb_A Uncharacterized conserv 89.1 0.43 1.5E-05 43.8 5.2 33 91-124 25-58 (317)
335 1pjc_A Protein (L-alanine dehy 88.9 0.37 1.3E-05 45.1 4.8 33 91-124 168-200 (361)
336 2y0c_A BCEC, UDP-glucose dehyd 88.9 0.36 1.2E-05 47.1 4.8 34 90-124 8-41 (478)
337 2raf_A Putative dinucleotide-b 88.9 0.45 1.5E-05 40.8 4.9 34 91-125 20-53 (209)
338 3g17_A Similar to 2-dehydropan 88.9 0.24 8.2E-06 44.9 3.3 33 91-124 3-35 (294)
339 3p2y_A Alanine dehydrogenase/p 88.9 0.29 1E-05 46.2 3.9 34 90-124 184-217 (381)
340 2ew2_A 2-dehydropantoate 2-red 88.7 0.4 1.4E-05 43.3 4.7 32 92-124 5-36 (316)
341 3k96_A Glycerol-3-phosphate de 88.7 0.45 1.5E-05 44.5 5.1 33 91-124 30-62 (356)
342 3ego_A Probable 2-dehydropanto 88.7 0.42 1.4E-05 43.6 4.8 32 91-124 3-34 (307)
343 1x13_A NAD(P) transhydrogenase 88.6 0.39 1.3E-05 45.8 4.7 34 90-124 172-205 (401)
344 1bg6_A N-(1-D-carboxylethyl)-L 88.5 0.42 1.4E-05 44.2 4.8 33 91-124 5-37 (359)
345 3tl2_A Malate dehydrogenase; c 88.5 0.49 1.7E-05 43.5 5.1 32 91-123 9-41 (315)
346 3d0o_A L-LDH 1, L-lactate dehy 88.3 0.38 1.3E-05 44.2 4.3 33 90-123 6-40 (317)
347 2v6b_A L-LDH, L-lactate dehydr 88.2 0.45 1.6E-05 43.4 4.7 32 92-124 2-35 (304)
348 1nyt_A Shikimate 5-dehydrogena 88.1 0.47 1.6E-05 42.5 4.7 32 91-123 120-151 (271)
349 1vl6_A Malate oxidoreductase; 88.0 0.4 1.4E-05 45.3 4.2 35 89-124 191-226 (388)
350 3c24_A Putative oxidoreductase 88.0 0.38 1.3E-05 43.3 4.0 33 91-124 12-45 (286)
351 1l7d_A Nicotinamide nucleotide 88.0 0.47 1.6E-05 44.9 4.8 34 90-124 172-205 (384)
352 3gg2_A Sugar dehydrogenase, UD 88.0 0.45 1.5E-05 46.0 4.8 33 91-124 3-35 (450)
353 3c85_A Putative glutathione-re 87.9 0.4 1.4E-05 39.9 3.8 34 91-124 40-73 (183)
354 1y56_A Hypothetical protein PH 87.7 0.74 2.5E-05 44.9 6.2 44 183-241 269-312 (493)
355 1t2d_A LDH-P, L-lactate dehydr 87.7 0.5 1.7E-05 43.5 4.7 33 91-124 5-38 (322)
356 2eez_A Alanine dehydrogenase; 87.6 0.51 1.7E-05 44.3 4.8 34 90-124 166-199 (369)
357 2ewd_A Lactate dehydrogenase,; 87.5 0.46 1.6E-05 43.5 4.3 33 91-124 5-38 (317)
358 3l9w_A Glutathione-regulated p 87.5 0.53 1.8E-05 45.0 4.8 33 91-124 5-37 (413)
359 1y6j_A L-lactate dehydrogenase 87.2 0.61 2.1E-05 42.9 4.9 33 91-124 8-42 (318)
360 1z82_A Glycerol-3-phosphate de 87.1 0.58 2E-05 43.1 4.8 33 90-123 14-46 (335)
361 1zej_A HBD-9, 3-hydroxyacyl-CO 87.0 0.63 2.1E-05 42.3 4.8 34 89-124 11-44 (293)
362 1zcj_A Peroxisomal bifunctiona 86.9 0.58 2E-05 45.4 4.8 32 92-124 39-70 (463)
363 4huj_A Uncharacterized protein 86.8 0.37 1.3E-05 41.6 3.0 33 91-124 24-57 (220)
364 3hwr_A 2-dehydropantoate 2-red 86.5 0.62 2.1E-05 42.7 4.6 31 91-123 20-50 (318)
365 4a7p_A UDP-glucose dehydrogena 86.5 0.68 2.3E-05 44.7 5.0 35 90-125 8-42 (446)
366 2vhw_A Alanine dehydrogenase; 86.4 0.65 2.2E-05 43.7 4.8 34 90-124 168-201 (377)
367 3phh_A Shikimate dehydrogenase 86.3 0.76 2.6E-05 41.2 4.9 34 90-124 118-151 (269)
368 4ffl_A PYLC; amino acid, biosy 86.3 0.69 2.4E-05 43.0 4.9 33 92-125 3-35 (363)
369 4dll_A 2-hydroxy-3-oxopropiona 86.2 0.63 2.2E-05 42.7 4.5 33 91-124 32-64 (320)
370 3gvi_A Malate dehydrogenase; N 86.2 0.77 2.6E-05 42.4 5.0 33 91-124 8-41 (324)
371 2vns_A Metalloreductase steap3 86.0 0.79 2.7E-05 39.4 4.8 33 91-124 29-61 (215)
372 3k6j_A Protein F01G10.3, confi 85.9 0.67 2.3E-05 44.9 4.7 34 91-125 55-88 (460)
373 2egg_A AROE, shikimate 5-dehyd 85.8 0.78 2.7E-05 41.7 4.8 33 90-123 141-174 (297)
374 1ldn_A L-lactate dehydrogenase 85.7 0.7 2.4E-05 42.4 4.5 33 91-124 7-41 (316)
375 1mv8_A GMD, GDP-mannose 6-dehy 85.6 0.6 2E-05 44.9 4.1 32 92-124 2-33 (436)
376 2aef_A Calcium-gated potassium 85.6 0.49 1.7E-05 41.1 3.2 32 91-124 10-41 (234)
377 1ur5_A Malate dehydrogenase; o 85.5 0.83 2.8E-05 41.7 4.9 33 91-124 3-36 (309)
378 1guz_A Malate dehydrogenase; o 85.5 0.81 2.8E-05 41.8 4.8 33 92-124 2-35 (310)
379 3ond_A Adenosylhomocysteinase; 85.3 0.76 2.6E-05 44.8 4.7 34 90-124 265-298 (488)
380 3ggo_A Prephenate dehydrogenas 85.3 0.94 3.2E-05 41.5 5.1 33 91-124 34-68 (314)
381 3dtt_A NADP oxidoreductase; st 85.2 0.91 3.1E-05 39.8 4.9 34 90-124 19-52 (245)
382 1p77_A Shikimate 5-dehydrogena 85.2 0.61 2.1E-05 41.8 3.7 33 91-124 120-152 (272)
383 1nvt_A Shikimate 5'-dehydrogen 85.2 0.81 2.8E-05 41.2 4.6 31 91-123 129-159 (287)
384 3g0o_A 3-hydroxyisobutyrate de 85.1 0.85 2.9E-05 41.3 4.8 33 91-124 8-40 (303)
385 1jay_A Coenzyme F420H2:NADP+ o 85.1 0.97 3.3E-05 38.3 4.9 32 92-124 2-34 (212)
386 3pef_A 6-phosphogluconate dehy 85.1 0.87 3E-05 40.8 4.8 32 92-124 3-34 (287)
387 3p7m_A Malate dehydrogenase; p 85.0 0.99 3.4E-05 41.6 5.1 33 91-124 6-39 (321)
388 1zud_1 Adenylyltransferase THI 85.0 0.76 2.6E-05 40.7 4.2 34 90-124 28-62 (251)
389 3eag_A UDP-N-acetylmuramate:L- 85.0 0.79 2.7E-05 42.1 4.5 34 91-125 5-39 (326)
390 3qha_A Putative oxidoreductase 84.8 0.8 2.7E-05 41.4 4.4 34 91-125 16-49 (296)
391 3qsg_A NAD-binding phosphogluc 84.6 0.68 2.3E-05 42.3 3.9 32 91-123 25-57 (312)
392 1txg_A Glycerol-3-phosphate de 84.5 0.7 2.4E-05 42.3 3.9 30 92-122 2-31 (335)
393 3tnl_A Shikimate dehydrogenase 84.4 0.97 3.3E-05 41.5 4.8 33 90-123 154-187 (315)
394 1a5z_A L-lactate dehydrogenase 84.4 0.73 2.5E-05 42.3 4.0 32 92-124 2-35 (319)
395 3pqe_A L-LDH, L-lactate dehydr 84.4 0.86 2.9E-05 42.1 4.4 32 91-123 6-39 (326)
396 3doj_A AT3G25530, dehydrogenas 84.4 0.91 3.1E-05 41.3 4.6 33 91-124 22-54 (310)
397 1yj8_A Glycerol-3-phosphate de 84.2 0.77 2.6E-05 43.0 4.1 33 92-125 23-62 (375)
398 1pjq_A CYSG, siroheme synthase 84.2 0.85 2.9E-05 44.2 4.5 33 90-123 12-44 (457)
399 3jyo_A Quinate/shikimate dehyd 84.2 0.99 3.4E-05 40.8 4.7 33 90-123 127-160 (283)
400 3g79_A NDP-N-acetyl-D-galactos 84.1 0.85 2.9E-05 44.4 4.5 35 91-125 19-54 (478)
401 3k30_A Histamine dehydrogenase 84.0 1.3 4.6E-05 45.0 6.1 98 91-241 524-623 (690)
402 1vg0_A RAB proteins geranylger 83.8 2.4 8.3E-05 42.8 7.7 56 169-239 377-434 (650)
403 3vku_A L-LDH, L-lactate dehydr 83.7 0.91 3.1E-05 41.9 4.3 32 91-123 10-43 (326)
404 2uyy_A N-PAC protein; long-cha 83.5 1.3 4.3E-05 40.3 5.2 33 91-124 31-63 (316)
405 1evy_A Glycerol-3-phosphate de 83.5 0.77 2.6E-05 42.7 3.8 32 92-124 17-48 (366)
406 2o3j_A UDP-glucose 6-dehydroge 83.4 0.78 2.7E-05 44.7 3.9 34 91-124 10-44 (481)
407 1b37_A Protein (polyamine oxid 83.4 1.4 4.9E-05 42.3 5.8 56 170-240 206-268 (472)
408 3mog_A Probable 3-hydroxybutyr 83.3 1.1 3.7E-05 43.8 4.9 33 91-124 6-38 (483)
409 3don_A Shikimate dehydrogenase 83.1 0.96 3.3E-05 40.7 4.1 34 90-124 117-151 (277)
410 3u62_A Shikimate dehydrogenase 83.0 1.3 4.5E-05 39.2 4.9 32 92-124 110-142 (253)
411 3rui_A Ubiquitin-like modifier 82.9 1.2 4.1E-05 41.3 4.8 34 90-124 34-68 (340)
412 3l6d_A Putative oxidoreductase 82.9 1.3 4.5E-05 40.2 5.0 33 91-124 10-42 (306)
413 2zyd_A 6-phosphogluconate dehy 82.8 1.2 4.1E-05 43.4 4.9 34 90-124 15-48 (480)
414 3d4o_A Dipicolinate synthase s 82.7 1.3 4.3E-05 40.1 4.8 33 90-123 155-187 (293)
415 3h8v_A Ubiquitin-like modifier 82.7 0.99 3.4E-05 41.0 4.0 34 90-124 36-70 (292)
416 1hyh_A L-hicdh, L-2-hydroxyiso 82.6 0.94 3.2E-05 41.3 3.9 32 92-124 3-36 (309)
417 1lu9_A Methylene tetrahydromet 82.6 1.2 4.3E-05 39.9 4.7 32 91-123 120-152 (287)
418 3vtf_A UDP-glucose 6-dehydroge 82.6 0.93 3.2E-05 43.7 4.0 33 91-124 22-54 (444)
419 3dhn_A NAD-dependent epimerase 82.6 1.1 3.7E-05 38.2 4.1 32 92-124 6-38 (227)
420 3c7a_A Octopine dehydrogenase; 82.6 0.98 3.3E-05 42.7 4.1 29 92-121 4-33 (404)
421 2rir_A Dipicolinate synthase, 82.5 1.3 4.4E-05 40.1 4.8 33 90-123 157-189 (300)
422 1oju_A MDH, malate dehydrogena 82.5 0.99 3.4E-05 41.0 4.0 32 92-124 2-35 (294)
423 3orq_A N5-carboxyaminoimidazol 82.5 2.1 7.1E-05 40.1 6.4 34 91-125 13-46 (377)
424 3o8q_A Shikimate 5-dehydrogena 82.4 1.4 4.8E-05 39.7 4.9 33 90-123 126-159 (281)
425 2f1k_A Prephenate dehydrogenas 82.4 1.3 4.4E-05 39.4 4.7 32 92-124 2-33 (279)
426 3e8x_A Putative NAD-dependent 82.3 1.4 4.8E-05 37.8 4.8 33 91-124 22-55 (236)
427 3o38_A Short chain dehydrogena 82.2 0.93 3.2E-05 39.9 3.6 33 91-124 23-57 (266)
428 3t4e_A Quinate/shikimate dehyd 82.2 1.3 4.6E-05 40.5 4.8 33 90-123 148-181 (312)
429 3pwz_A Shikimate dehydrogenase 82.2 1.3 4.6E-05 39.6 4.7 33 90-123 120-153 (272)
430 3ew7_A LMO0794 protein; Q8Y8U8 82.1 1.5 5.2E-05 36.9 4.8 32 92-124 2-34 (221)
431 2zqz_A L-LDH, L-lactate dehydr 82.1 1.2 4.1E-05 41.1 4.4 33 90-123 9-43 (326)
432 2pv7_A T-protein [includes: ch 81.9 1.4 4.7E-05 39.9 4.7 32 92-124 23-55 (298)
433 3gpi_A NAD-dependent epimerase 81.8 1.6 5.4E-05 38.7 5.0 32 92-124 5-36 (286)
434 4gx0_A TRKA domain protein; me 81.8 1.3 4.6E-05 43.8 4.9 34 91-125 349-382 (565)
435 3fbt_A Chorismate mutase and s 81.7 1.2 4.1E-05 40.2 4.2 34 90-124 122-156 (282)
436 3k31_A Enoyl-(acyl-carrier-pro 81.7 1.3 4.6E-05 39.8 4.6 33 91-124 31-66 (296)
437 3pdu_A 3-hydroxyisobutyrate de 81.7 0.89 3E-05 40.8 3.3 32 92-124 3-34 (287)
438 4e21_A 6-phosphogluconate dehy 81.6 1.4 4.8E-05 41.2 4.8 33 91-124 23-55 (358)
439 2h78_A Hibadh, 3-hydroxyisobut 81.5 1.2 4E-05 40.2 4.1 32 92-124 5-36 (302)
440 2i6t_A Ubiquitin-conjugating e 81.5 1.1 3.8E-05 40.8 4.0 33 91-124 15-49 (303)
441 2p4q_A 6-phosphogluconate dehy 81.4 1.5 5E-05 43.0 5.0 34 90-124 10-43 (497)
442 4e4t_A Phosphoribosylaminoimid 81.3 1.7 5.7E-05 41.5 5.3 34 90-124 35-68 (419)
443 3h2s_A Putative NADH-flavin re 81.2 1.6 5.5E-05 36.9 4.7 32 92-124 2-34 (224)
444 2hk9_A Shikimate dehydrogenase 81.1 1.2 4.1E-05 39.8 4.0 33 91-124 130-162 (275)
445 2g5c_A Prephenate dehydrogenas 81.1 1.5 5.1E-05 39.0 4.6 32 92-124 3-36 (281)
446 1hdo_A Biliverdin IX beta redu 81.1 1.9 6.4E-05 35.8 5.0 32 92-124 5-37 (206)
447 1x0v_A GPD-C, GPDH-C, glycerol 81.0 0.83 2.8E-05 42.2 3.0 34 91-125 9-49 (354)
448 2rcy_A Pyrroline carboxylate r 80.9 1.3 4.5E-05 38.8 4.1 34 91-125 5-42 (262)
449 3ius_A Uncharacterized conserv 80.8 1.6 5.6E-05 38.5 4.8 33 91-124 6-38 (286)
450 2yg5_A Putrescine oxidase; oxi 80.6 1.4 4.7E-05 42.0 4.5 52 170-241 215-267 (453)
451 1yqg_A Pyrroline-5-carboxylate 80.6 1.3 4.4E-05 38.9 4.0 32 92-124 2-34 (263)
452 3ce6_A Adenosylhomocysteinase; 80.6 1.5 5.1E-05 42.9 4.7 34 90-124 274-307 (494)
453 3gvp_A Adenosylhomocysteinase 80.4 1.4 4.8E-05 42.2 4.3 34 90-124 220-253 (435)
454 3op4_A 3-oxoacyl-[acyl-carrier 80.4 1.5 5E-05 38.3 4.2 33 91-124 10-43 (248)
455 3nep_X Malate dehydrogenase; h 80.3 1.4 4.7E-05 40.5 4.1 32 92-124 2-35 (314)
456 1vpd_A Tartronate semialdehyde 80.1 1.4 4.8E-05 39.5 4.1 33 91-124 6-38 (299)
457 2wtb_A MFP2, fatty acid multif 80.0 1.5 5E-05 45.1 4.7 32 92-124 314-345 (725)
458 2dvm_A Malic enzyme, 439AA lon 79.9 1.6 5.3E-05 42.1 4.5 31 90-121 186-219 (439)
459 2gf2_A Hibadh, 3-hydroxyisobut 79.8 1.5 5E-05 39.3 4.2 32 92-124 2-33 (296)
460 3vh1_A Ubiquitin-like modifier 79.8 1.7 5.9E-05 43.3 4.9 34 90-124 327-361 (598)
461 4aj2_A L-lactate dehydrogenase 79.8 1.9 6.7E-05 39.8 5.0 32 91-123 20-53 (331)
462 3un1_A Probable oxidoreductase 79.8 1.3 4.6E-05 39.0 3.8 34 91-125 29-63 (260)
463 2d5c_A AROE, shikimate 5-dehyd 79.8 1.8 6E-05 38.3 4.6 31 92-123 118-148 (263)
464 2pgd_A 6-phosphogluconate dehy 79.7 1.7 5.9E-05 42.2 4.9 33 91-124 3-35 (482)
465 3ojo_A CAP5O; rossmann fold, c 79.4 1.4 4.9E-05 42.2 4.1 33 91-124 12-44 (431)
466 2pd4_A Enoyl-[acyl-carrier-pro 79.4 2.2 7.5E-05 37.7 5.1 32 92-124 8-42 (275)
467 3ldh_A Lactate dehydrogenase; 79.3 1.5 5E-05 40.6 3.9 32 91-123 22-55 (330)
468 4eez_A Alcohol dehydrogenase 1 79.2 2 6.7E-05 39.5 4.9 34 91-124 165-198 (348)
469 1y8q_A Ubiquitin-like 1 activa 79.1 1.5 5.2E-05 40.7 4.0 35 89-124 35-70 (346)
470 3ak4_A NADH-dependent quinucli 79.1 2.3 8E-05 37.2 5.2 33 91-124 13-46 (263)
471 2b9w_A Putative aminooxidase; 79.0 1.8 6.1E-05 40.8 4.6 43 183-241 215-257 (424)
472 3ppi_A 3-hydroxyacyl-COA dehyd 79.0 2.1 7.3E-05 37.9 4.9 33 91-124 31-64 (281)
473 1leh_A Leucine dehydrogenase; 79.0 1.9 6.4E-05 40.4 4.7 34 89-123 172-205 (364)
474 3cky_A 2-hydroxymethyl glutara 79.0 1.7 5.8E-05 39.0 4.3 33 91-124 5-37 (301)
475 3h5n_A MCCB protein; ubiquitin 78.9 1.6 5.4E-05 40.7 4.1 34 90-124 118-152 (353)
476 3fi9_A Malate dehydrogenase; s 78.9 2 6.9E-05 39.9 4.8 32 91-123 9-43 (343)
477 2dkn_A 3-alpha-hydroxysteroid 78.8 2.2 7.5E-05 36.8 4.8 32 92-124 3-35 (255)
478 1gpj_A Glutamyl-tRNA reductase 78.8 1.5 5.1E-05 41.6 4.0 33 90-123 167-200 (404)
479 1edz_A 5,10-methylenetetrahydr 78.8 1.7 6E-05 39.9 4.3 34 89-123 176-210 (320)
480 3tri_A Pyrroline-5-carboxylate 78.7 2.1 7.3E-05 38.3 4.8 33 91-124 4-39 (280)
481 3v8b_A Putative dehydrogenase, 78.7 2.2 7.5E-05 38.1 4.9 33 91-124 29-62 (283)
482 4gwg_A 6-phosphogluconate dehy 78.7 2.1 7.1E-05 41.8 5.0 33 91-124 5-37 (484)
483 2qyt_A 2-dehydropantoate 2-red 78.7 1.1 3.7E-05 40.5 2.9 32 91-122 9-45 (317)
484 1npy_A Hypothetical shikimate 78.5 1.7 5.7E-05 39.0 4.0 32 91-123 120-152 (271)
485 4dyv_A Short-chain dehydrogena 78.5 1.6 5.4E-05 38.9 3.8 32 92-124 30-62 (272)
486 1pgj_A 6PGDH, 6-PGDH, 6-phosph 78.3 1.9 6.4E-05 42.0 4.6 32 92-124 3-34 (478)
487 3k5i_A Phosphoribosyl-aminoimi 78.3 1.7 5.8E-05 41.2 4.2 31 90-121 24-54 (403)
488 3two_A Mannitol dehydrogenase; 78.2 2.2 7.5E-05 39.3 4.9 34 90-124 177-210 (348)
489 3dfu_A Uncharacterized protein 78.2 0.67 2.3E-05 40.7 1.2 32 91-123 7-38 (232)
490 1w4x_A Phenylacetone monooxyge 78.2 1.6 5.5E-05 43.0 4.1 34 91-125 187-220 (542)
491 2iz1_A 6-phosphogluconate dehy 78.1 2.2 7.4E-05 41.4 5.0 33 91-124 6-38 (474)
492 2izz_A Pyrroline-5-carboxylate 78.0 1.9 6.5E-05 39.4 4.4 33 91-124 23-59 (322)
493 3r6d_A NAD-dependent epimerase 77.9 2.4 8.2E-05 35.9 4.7 32 92-124 7-40 (221)
494 3abi_A Putative uncharacterize 77.8 2.2 7.7E-05 39.7 4.8 33 89-123 15-47 (365)
495 2zat_A Dehydrogenase/reductase 77.7 2.1 7E-05 37.5 4.4 32 92-124 16-48 (260)
496 3ktd_A Prephenate dehydrogenas 77.5 2.2 7.4E-05 39.6 4.6 33 91-124 9-41 (341)
497 4gsl_A Ubiquitin-like modifier 77.5 2.1 7.3E-05 42.8 4.8 35 89-124 325-360 (615)
498 1ez4_A Lactate dehydrogenase; 77.5 2 6.8E-05 39.4 4.3 32 91-123 6-39 (318)
499 4fs3_A Enoyl-[acyl-carrier-pro 77.4 2.6 9E-05 37.0 4.9 33 91-124 7-42 (256)
500 3q2o_A Phosphoribosylaminoimid 77.3 2.3 8E-05 39.8 4.9 33 91-124 15-47 (389)
No 1
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=100.00 E-value=3.1e-40 Score=311.93 Aligned_cols=275 Identities=63% Similarity=1.026 Sum_probs=240.0
Q ss_pred CCC--CCCccCCCccchhhHHHHHHHhhhcccCCcccEEEECCCHHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCC
Q 018414 58 YDL--NTFKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGG 134 (356)
Q Consensus 58 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~DVvIIGgG~aGl~aA~~La~~-~G~~V~llEk~~~~Gg~~~~~g 134 (356)
.+| +.|.|.++.+..+++.+.++|+..+....+|||+|||||++|+++|+.|+++ +|++|+|||+...+|+++|.++
T Consensus 45 ~~~~~~~~~f~~i~~~~isra~~~~~~~~~~~~~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g 124 (344)
T 3jsk_A 45 PTLGTDAFTFSPIRESTVSRAMTRRYFADLDAHAETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGG 124 (344)
T ss_dssp GGTTSTTCCCCCCCHHHHHHHHHHHHHHHHHHHHBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCB
T ss_pred cccccCCcCcccccHHHHHHHHHHhhhhhhcccCcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCC
Confidence 356 7889999999999999999998876666679999999999999999999984 5899999999999999999888
Q ss_pred ccchhhhccchHHHHHHHhCCCccccCCeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeC-------------
Q 018414 135 QLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG------------- 201 (356)
Q Consensus 135 ~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~------------- 201 (356)
+.+..........++++++|++|.....|+...+..++.+.|++.+.+..|+++++++.++++..++
T Consensus 125 ~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~ 204 (344)
T 3jsk_A 125 QLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGE 204 (344)
T ss_dssp TTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC------------
T ss_pred ccchhhhcchHHHHHHHHcCCcccccCCeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccc
Confidence 8887777667778999999999987767877777888899999998855799999999999999876
Q ss_pred ----C--eEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCCCCCCccchhhhccCcccccccccccccccccce
Q 018414 202 ----G--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDA 275 (356)
Q Consensus 202 ----~--~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 275 (356)
+ +|.||.++|..+..++....+.+..+|+|++||+|||+.+++.+...+++.+++....++++.++|++..++.
T Consensus 205 ~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~ 284 (344)
T 3jsk_A 205 AEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDA 284 (344)
T ss_dssp ----CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHH
T ss_pred cccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhh
Confidence 3 8889988765444443332234567899999999999999999888999999998777899999999999999
Q ss_pred eeeccccccCceeEeceEEEEecCCcccCCccceeeeehHHHHHHHHHHhCCCCCCC
Q 018414 276 IVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALD 332 (356)
Q Consensus 276 ~~~~~~e~~~g~~~~~~~~~~~~g~~~~~~~~g~~l~sG~~~~~l~l~~~~~~~~~~ 332 (356)
++..++|++||+++.||++..++|.+||||.||.|++||.+++++|+++|+.....+
T Consensus 285 ~v~~t~~v~~gl~~~gm~~~~~~g~~rmgp~fg~m~~sg~~~a~~~~~~~~~~~~~~ 341 (344)
T 3jsk_A 285 IVNNTREIVPGLIVGGMELSEIDGANRMGPTFGAMALSGVKAAHEAIRVFDLRKAQN 341 (344)
T ss_dssp HHHTCEEEETTEEECGGGHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccCceEcCCEEEechhhHhhcCCCCCCcccceeeecCHHHHHHHHHHHHhhhhhc
Confidence 999999999999999999999999999999999999999999999999997765443
No 2
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=100.00 E-value=2.8e-34 Score=269.82 Aligned_cols=268 Identities=58% Similarity=0.963 Sum_probs=223.9
Q ss_pred CCCCCccCCCccchhhHHHHHHHhhhcccCCcccEEEECCCHHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCCccc
Q 018414 59 DLNTFKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLF 137 (356)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~DVvIIGgG~aGl~aA~~La~~-~G~~V~llEk~~~~Gg~~~~~g~~~ 137 (356)
+|..+.+.++.+....+.+..+++..|....++||+|||||++|+++|+.|++. +|++|+|+|+...+|++.|.++..+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~ 113 (326)
T 2gjc_A 34 DWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLF 113 (326)
T ss_dssp TCTTCCCCCCCHHHHHHHHHHHHHHHHHHTTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGC
T ss_pred CCCccccccccccccchhhhhhhhhhhcccCcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCccc
Confidence 344455666667777788888888887777789999999999999999999984 4899999999999999999887777
Q ss_pred hhhhccchHHHHHHHhCCCccccCCeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEe---C-C--eEEEEEEcc
Q 018414 138 SAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK---G-G--RVGGVVTNW 211 (356)
Q Consensus 138 ~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~---~-~--~v~gv~~~~ 211 (356)
...........++.++|++|.....++...+...+...|++++.+..|++++++++|+++..+ + + +|.||.++|
T Consensus 114 ~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~ 193 (326)
T 2gjc_A 114 SAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNW 193 (326)
T ss_dssp CCEEEETTTHHHHHHTTCCCEECSSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEE
T ss_pred chhhhhhHHHHHHHhhCcccccCCCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecc
Confidence 666666667889999999998777777777888888999998886679999999999999987 3 5 899998876
Q ss_pred eeeecccCCCCCCCCeEEEc---------------CEEEEcCCCCCCCCCccchhhhccCccccccccccccccccccee
Q 018414 212 ALVSMNHDTQSCMDPNVMEA---------------KVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAI 276 (356)
Q Consensus 212 ~~~~~~~~~~~~g~~~~i~A---------------k~VI~AtGg~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 276 (356)
..+..++....+.+..++.| |.||+|||+.+++++...+.+..++....++++.++|++..++.+
T Consensus 194 ~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~ 273 (326)
T 2gjc_A 194 TLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDV 273 (326)
T ss_dssp HHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHHHHHHHHHHSSCCCCCCCCBCHHHHHHHH
T ss_pred eeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHHHHhhccccccccccCceeccccccchhhe
Confidence 54333332223345678999 999999999999998777777777777789999999999999999
Q ss_pred eecccc--ccCceeEeceEEEEecCCcccCCccceeeeehHHHHHHHHHHhC
Q 018414 277 VRLTRE--VVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLG 326 (356)
Q Consensus 277 ~~~~~e--~~~g~~~~~~~~~~~~g~~~~~~~~g~~l~sG~~~~~l~l~~~~ 326 (356)
++.+++ ++||+++.||++..++|.+||+|.||.|++||.+++++|+++|.
T Consensus 274 ~~~~~~~~~~~~~~~~g~~~~~~~~~~r~g~~fg~m~~sg~~~a~~~~~~~~ 325 (326)
T 2gjc_A 274 VIHSGAYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp HHHCEECTTSTTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred eecCCCccccCCEEECChHHHHhcCCCCCChhhhhhhhhhHHHHHHHHHHhh
Confidence 999999 99999999999999999999999999999999999999999874
No 3
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.98 E-value=1.1e-31 Score=249.13 Aligned_cols=280 Identities=90% Similarity=1.349 Sum_probs=217.4
Q ss_pred CCCCCCCCCccCCCccchhhHHHHHHHhhhcccCCcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCC
Q 018414 55 SPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGG 134 (356)
Q Consensus 55 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g 134 (356)
.++++|+.|.|.+++|...++.|.++|+..|..+.++||+|||||++|+++|+.|++++|.+|+||||...+|+++|.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~ 83 (284)
T 1rp0_A 4 SAGYDLNAFTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGG 83 (284)
T ss_dssp ---CCTTSCCCCCCCHHHHHHHHHHHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCS
T ss_pred ccCCCCcceeeeccchhhhHHHHHHHHHHhhhhccccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCC
Confidence 46788999999999999999999999998776666799999999999999999999943899999999999998888877
Q ss_pred ccchhhhccchHHHHHHHhCCCccccCCeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceee
Q 018414 135 QLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALV 214 (356)
Q Consensus 135 ~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~ 214 (356)
+.+..+.......+|++++|++|.....+....+...+...|++++.++.|++++++++|+++..+++++.++.+.+..+
T Consensus 84 ~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~ 163 (284)
T 1rp0_A 84 QLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALV 163 (284)
T ss_dssp TTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHH
T ss_pred cchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEecccc
Confidence 77666666666778999999999877666666677888888888887667999999999999999888888887753111
Q ss_pred ecccCCCCCCCCeEEEcCEEEEcCCCCCCCCCccchhhhccCcccccccccccccccccceeeeccccccCceeEeceEE
Q 018414 215 SMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEV 294 (356)
Q Consensus 215 ~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~~~~~~ 294 (356)
.++..++.+++..+++||.||+|+|+.+.......+.+...++...+....+++.+..+..++...++++|+++..|+.+
T Consensus 164 ~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~ 243 (284)
T 1rp0_A 164 AQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEV 243 (284)
T ss_dssp HTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEEEETTEEECTHHH
T ss_pred ccccCccccCceEEEECCEEEECCCCchHHHHHHHHHhhhccCCCCcCCcCCchhhhhhHHHhhccccccCCEEEEeeeh
Confidence 11111111234578999999999999887665444444444433334444555554333333444556779999999987
Q ss_pred EEecCCcccCCccceeeeehHHHHHHHHHHhCCCCCCCCc
Q 018414 295 AEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGT 334 (356)
Q Consensus 295 ~~~~g~~~~~~~~g~~l~sG~~~~~l~l~~~~~~~~~~~~ 334 (356)
...++.++++|.|+.|+.||+.++..++++|++....+++
T Consensus 244 ~~~~g~~~~gp~~~~~~~sG~~~a~~i~~~l~~~~~~~~~ 283 (284)
T 1rp0_A 244 AEIDGAPRMGPTFGAMMISGQKAGQLALKALGLPNAIDGT 283 (284)
T ss_dssp HHHHTCEECCSCCHHHHHHHHHHHHHHHHHTTCCCTTTTC
T ss_pred hhhcCCCCcChHHHHHHHhHHHHHHHHHHHhhhhhhhhcC
Confidence 7788999999999999999999999999999988877664
No 4
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.7e-24 Score=204.43 Aligned_cols=269 Identities=56% Similarity=0.913 Sum_probs=199.3
Q ss_pred CCCCCCCccCCCccchhhHHHHHHHhhhcccCCcccEEEECCCHHHHHHHHHhhc-CCCCeEEEEeccCCCCCccccCCc
Q 018414 57 PYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSK-NPNIQIAIIEQSVSPGGGAWLGGQ 135 (356)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~DVvIIGgG~aGl~aA~~La~-~~G~~V~llEk~~~~Gg~~~~~g~ 135 (356)
..+++.|++.|+++..+++.|+++|+.+|.+..++||+||||||+||+||++|++ +.|++|+|+||...+||.++.+++
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~ 111 (326)
T 3fpz_A 32 KEDWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQ 111 (326)
T ss_dssp STTCTTCCCCCCCHHHHHHHHHHHHHHHHHHTTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCST
T ss_pred cccccccccCCccHHHHHHHHHHHHHhhhhhccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCc
Confidence 4577889999999999999999999999988889999999999999999999974 239999999999999999999888
Q ss_pred cchhhhccchHHHHHHHhCCCccccCCeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCC------eEEEEEE
Q 018414 136 LFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG------RVGGVVT 209 (356)
Q Consensus 136 ~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~------~v~gv~~ 209 (356)
++..........+.++++|+++..........+...+......+.....|.+++....+.++...++ ++.++-.
T Consensus 112 ~~~~~~l~~~~~~~~~e~Gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~vigg 191 (326)
T 3fpz_A 112 LFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVT 191 (326)
T ss_dssp TCCCEEEETTTHHHHHHTTCCCEECSSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEEESSCSSSSCEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCEEEECCcceecceeEEEEcchhhhccccccceeecccccceeeccCCcccCCCEEEEEcc
Confidence 8877777767777889999998877666666666666666666666678999999998888876542 3333322
Q ss_pred cceeeecccCCCCCCCCe---------------EEEcCEEEEcCCCCCCCCCccchhhhccCcccccccccccccccccc
Q 018414 210 NWALVSMNHDTQSCMDPN---------------VMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAED 274 (356)
Q Consensus 210 ~~~~~~~~~~~~~~g~~~---------------~i~Ak~VI~AtGg~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 274 (356)
.+..+.........+... ....+.++.++|..+.......+.....+......++.+++....++
T Consensus 192 g~~av~~a~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~e~ 271 (326)
T 3fpz_A 192 NWTLVTQAHGTQCAMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEH 271 (326)
T ss_dssp EEHHHHTCTTSSSCCCCEEEEESCBCTTSSBCTTSCCCEEEECCCSCSSSCSHHHHHHHHHCTTCCCCCCCCBCHHHHHH
T ss_pred CceeeehhhhhhhccCcEEEEeecccccccccceeecceEEEEecceeeEeecceeEEEecCceeeecceecccccccCC
Confidence 221111000000001111 22345788888877765555555555555544556666666666555
Q ss_pred eeeeccc--cccCceeEeceEEEEecCCcccCCccceeeeehHHHHHHHHHHh
Q 018414 275 AIVRLTR--EVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 325 (356)
Q Consensus 275 ~~~~~~~--e~~~g~~~~~~~~~~~~g~~~~~~~~g~~l~sG~~~~~l~l~~~ 325 (356)
.++...+ .-.||+|..|+.+...++.+||||.||.|+.||.++++.|++.|
T Consensus 272 ~iv~~~~~~t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~l 324 (326)
T 3fpz_A 272 DVVIHSGAYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHF 324 (326)
T ss_dssp HHHHHCEECTTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred eEEECCCeEECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHh
Confidence 5543222 23699999999998889999999999999999999999999987
No 5
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.73 E-value=3.4e-17 Score=159.58 Aligned_cols=212 Identities=20% Similarity=0.345 Sum_probs=135.6
Q ss_pred HHHhhhcccCCcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccC----------Cccchhh--------
Q 018414 79 RRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLG----------GQLFSAM-------- 140 (356)
Q Consensus 79 ~~~~~~m~~~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~----------g~~~~~~-------- 140 (356)
.+|+..|+ +.++||+|||||++|+++|+.|+++ |.+|+|+|+...+|+..... ......+
T Consensus 17 n~~~~~M~-~~~~dViIIGgG~AGl~aA~~La~~-G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~ 94 (417)
T 3v76_A 17 NLYFQSMV-AEKQDVVIIGAGAAGMMCAIEAGKR-GRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFC 94 (417)
T ss_dssp ------------CCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTT
T ss_pred cccccccc-CCCCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHH
Confidence 34444443 2469999999999999999999999 99999999998776432110 0001100
Q ss_pred ---h---ccchHHHHHHHhCCCccccCC--eEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcce
Q 018414 141 ---V---VRKPAHIFLDELGIDYDEQDN--YVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWA 212 (356)
Q Consensus 141 ---~---~~~~~~~~l~~~G~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~ 212 (356)
+ ......+|++++|+++..... .........+.+.|.+.+. +.|++++++++|+++..+++.+ .|.+.
T Consensus 95 ~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~-~~Gv~i~~~~~V~~i~~~~~~~-~V~~~-- 170 (417)
T 3v76_A 95 KSALARYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMK-EAGVQLRLETSIGEVERTASGF-RVTTS-- 170 (417)
T ss_dssp HHHHHHSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHH-HHTCEEECSCCEEEEEEETTEE-EEEET--
T ss_pred HHHHHhcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHH-HCCCEEEECCEEEEEEEeCCEE-EEEEC--
Confidence 0 011345778888988765532 2223456778888888876 5699999999999999887753 34443
Q ss_pred eeecccCCCCCCCCeEEEcCEEEEcCCCCCC--CCC--ccchhhhccCc--cccccccccccccccc-ceeeeccccccC
Q 018414 213 LVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP--FGA--TGVKRLKSIGM--IEEVPGMKALDMNSAE-DAIVRLTREVVP 285 (356)
Q Consensus 213 ~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~--~~~--~~~~~~~~~g~--~~~~~~~~~~~~~~~~-~~~~~~~~e~~~ 285 (356)
..+++||.||+|||+++. .+. .+++.+...|+ .+..|.++++.+.... .++..+ +
T Consensus 171 -------------~g~i~ad~VIlAtG~~S~p~~gs~g~g~~la~~~G~~i~~~~p~l~~~~~~~~~~~~~~~l-----~ 232 (417)
T 3v76_A 171 -------------AGTVDAASLVVASGGKSIPKMGATGLAYRIAEQFGLPVVETRPALVPLTLDQAQLAKLGAL-----A 232 (417)
T ss_dssp -------------TEEEEESEEEECCCCSSCGGGTCCCHHHHHHHHTTCCEEEEEEESCCEECCHHHHHHTGGG-----T
T ss_pred -------------CcEEEeeEEEECCCCccCCCCCCCcHHHHHHHHCCCCEecccceeeeEEecCccccccccC-----C
Confidence 137999999999999872 222 56778888887 5667778885544211 222333 7
Q ss_pred ceeEeceEEEEecCCcccCCccceee-----eehHHHHHH
Q 018414 286 GMIVTGMEVAEIDGAPRMGPTFGAMM-----ISGQKAAHL 320 (356)
Q Consensus 286 g~~~~~~~~~~~~g~~~~~~~~g~~l-----~sG~~~~~l 320 (356)
|+.+. ..+.+ +.. ...|+++ +|||.++++
T Consensus 233 G~~~~-~~~~~--~~~---~~~~~~lft~~G~sGp~il~~ 266 (417)
T 3v76_A 233 GVAAD-AEARF--GKA---AFREAVLITHRGLSGPAILQI 266 (417)
T ss_dssp TCEEE-EEEEE--TTE---EEEEEEEECSSEEESHHHHHH
T ss_pred CCcee-EEEEE--CCE---eeeeeeEEECCCcchHHHHHH
Confidence 87775 44433 211 1235666 899999884
No 6
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.73 E-value=6.3e-17 Score=159.03 Aligned_cols=164 Identities=20% Similarity=0.330 Sum_probs=114.1
Q ss_pred CCcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCC---------ccchhh--------------h---
Q 018414 88 YADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGG---------QLFSAM--------------V--- 141 (356)
Q Consensus 88 ~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g---------~~~~~~--------------~--- 141 (356)
.+++||+|||||++|+++|+.|+++ |.+|+||||...+|+.....+ ..+..+ +
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~-G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEE-GANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIF 102 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHS
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHC-CCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhc
Confidence 3469999999999999999999999 999999999987764321110 000010 0
Q ss_pred ccchHHHHHHHhCCCccccCCeEEE---echHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeeccc
Q 018414 142 VRKPAHIFLDELGIDYDEQDNYVVI---KHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNH 218 (356)
Q Consensus 142 ~~~~~~~~l~~~G~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~ 218 (356)
......+|+..+|+++........+ .....+.+.|.+.+. +.|++++++++|+++..+++++.+|.+.+
T Consensus 103 ~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~-~~GV~i~~~~~V~~i~~~~~~v~~V~~~~------- 174 (447)
T 2i0z_A 103 NNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLK-DLGVKIRTNTPVETIEYENGQTKAVILQT------- 174 (447)
T ss_dssp CHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHH-HTTCEEECSCCEEEEEEETTEEEEEEETT-------
T ss_pred CHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHH-HCCCEEEeCcEEEEEEecCCcEEEEEECC-------
Confidence 0113457788889887654322222 245778888888887 57999999999999998888888887742
Q ss_pred CCCCCCCCeEEEcCEEEEcCCCCCC--CCC--ccchhhhccCc--cccccccccc
Q 018414 219 DTQSCMDPNVMEAKVVVSSCGHDGP--FGA--TGVKRLKSIGM--IEEVPGMKAL 267 (356)
Q Consensus 219 ~~~~~g~~~~i~Ak~VI~AtGg~~~--~~~--~~~~~~~~~g~--~~~~~~~~~~ 267 (356)
..+++||.||+|||+++. .+. .++..+...|+ ....|.+.++
T Consensus 175 -------G~~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~~~~~~p~~~~~ 222 (447)
T 2i0z_A 175 -------GEVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHTITELFPTEVPI 222 (447)
T ss_dssp -------CCEEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCCEEEEEECSCCE
T ss_pred -------CCEEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCCcccCcceeeee
Confidence 246999999999999872 222 45666777776 3344555553
No 7
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.68 E-value=9.3e-16 Score=148.69 Aligned_cols=204 Identities=16% Similarity=0.226 Sum_probs=132.3
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCc--------c--ccCCccchhhhc--------------cch
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGG--------A--WLGGQLFSAMVV--------------RKP 145 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~--------~--~~~g~~~~~~~~--------------~~~ 145 (356)
+|||+|||||++|+++|+.|+++ |.+|+|+||...+|+. | .+.++.+..++. ...
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~-G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKL-GKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWD 82 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhC-CCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHH
Confidence 58999999999999999999999 9999999999876532 1 111111111110 112
Q ss_pred HHHHHHHhCCCccccCCeEEEe--chHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEe----CCeEEEEEEcceeeecccC
Q 018414 146 AHIFLDELGIDYDEQDNYVVIK--HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK----GGRVGGVVTNWALVSMNHD 219 (356)
Q Consensus 146 ~~~~l~~~G~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~----~~~v~gv~~~~~~~~~~~~ 219 (356)
..+|+.++|+++........+. +...+.+.|.+.+. +.|++++++++|+++..+ ++.+ .+.+.
T Consensus 83 ~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~-~~Gv~i~~~~~v~~i~~~~~g~~~~~-~v~~~--------- 151 (401)
T 2gqf_A 83 FISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECD-KYGAKILLRSEVSQVERIQNDEKVRF-VLQVN--------- 151 (401)
T ss_dssp HHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHH-HHTCEEECSCCEEEEEECCSCSSCCE-EEEET---------
T ss_pred HHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHH-HCCCEEEeCCEEEEEEcccCcCCCeE-EEEEC---------
Confidence 4578888999876543222222 56777788887776 579999999999999876 4543 34442
Q ss_pred CCCCCCCeEEEcCEEEEcCCCCCC--CCC--ccchhhhccCc--cccccccccccccccccee-eeccccccCceeEece
Q 018414 220 TQSCMDPNVMEAKVVVSSCGHDGP--FGA--TGVKRLKSIGM--IEEVPGMKALDMNSAEDAI-VRLTREVVPGMIVTGM 292 (356)
Q Consensus 220 ~~~~g~~~~i~Ak~VI~AtGg~~~--~~~--~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~-~~~~~e~~~g~~~~~~ 292 (356)
..+++||.||+|||+.+. .+. .++..+...|+ .+..|++.++.+.. .+.+ ..+ .|..+. .
T Consensus 152 ------~g~i~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~~i~~~~p~l~~~~~~~-~~~~~~~l-----~g~~~~-~ 218 (401)
T 2gqf_A 152 ------STQWQCKNLIVATGGLSMPGLGATPFGYQIAEQFGIPVIPPRASLVPFTYRE-TDKFLTAL-----SGISLP-V 218 (401)
T ss_dssp ------TEEEEESEEEECCCCSSCGGGTCCSHHHHHHHHTTCCEEEEEEESCCEECCG-GGGGGGGG-----TTCEEE-E
T ss_pred ------CCEEECCEEEECCCCccCCCCCCChHHHHHHHHCCCCcccCcceeeceecCC-chhhcccC-----CCeeee-e
Confidence 137999999999998872 122 56777888887 45567776644221 2222 223 555553 2
Q ss_pred EEEEecCCcccCCccceeee-----ehHHHHHHHH
Q 018414 293 EVAEIDGAPRMGPTFGAMMI-----SGQKAAHLAL 322 (356)
Q Consensus 293 ~~~~~~g~~~~~~~~g~~l~-----sG~~~~~l~l 322 (356)
.+.++ |.. . ..|++++ ||+.++++.-
T Consensus 219 ~~~i~-G~~-~--~~g~~l~t~~g~sG~~~l~~s~ 249 (401)
T 2gqf_A 219 TITAL-CGK-S--FYNQLLFTHRGISGPAVLQISN 249 (401)
T ss_dssp EEEET-TSC-E--EEEEEEECSSEEESHHHHHHTT
T ss_pred EEEEc-CCc-e--EEeCEEEECCCccHHHHHHHHH
Confidence 33332 321 1 2377774 9999888754
No 8
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.61 E-value=6.8e-15 Score=140.45 Aligned_cols=132 Identities=21% Similarity=0.294 Sum_probs=95.2
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccc----------
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDE---------- 159 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~---------- 159 (356)
+|||+||||||+|+++|+.|+++ |++|+|+||.+.+|.....++.+... .++++++....
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~-G~~V~v~Er~~~~~~~~~~g~~l~~~---------~l~~l~~~~~~~~~~~~~~~~ 73 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKY-GLKTLMIEKRPEIGSPVRCGEGLSKG---------ILNEADIKADRSFIANEVKGA 73 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSTTCSCCSCCEEETH---------HHHHTTCCCCTTTEEEEESEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeCCCCCCCCCceecccCHH---------HHHHcCCCchhhhhhcccceE
Confidence 59999999999999999999999 99999999988776543333333221 22333321110
Q ss_pred ------------------cCCeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCC
Q 018414 160 ------------------QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQ 221 (356)
Q Consensus 160 ------------------~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~ 221 (356)
...+.+..+...+...|.+.+. +.|++++++++++++..+++++.++....
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~-~~G~~~~~~~~v~~~~~~~~~~~~v~~~~---------- 142 (397)
T 3oz2_A 74 RIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAA-KAGADVWVKSPALGVIKENGKVAGAKIRH---------- 142 (397)
T ss_dssp EEECTTCSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHH-HHTCEEESSCCEEEEEEETTEEEEEEEEE----------
T ss_pred EEEeCCCceEeeccccccCCceeEEEEHHHHHHHHHHHHH-hcCcEEeeeeeeeeeeeccceeeeeeecc----------
Confidence 0111234456778888888876 57999999999999999999888776532
Q ss_pred CCCCCeEEEcCEEEEcCCCCCC
Q 018414 222 SCMDPNVMEAKVVVSSCGHDGP 243 (356)
Q Consensus 222 ~~g~~~~i~Ak~VI~AtGg~~~ 243 (356)
+++..+++||.||.|+|..+.
T Consensus 143 -~~~~~~~~a~~vIgAdG~~S~ 163 (397)
T 3oz2_A 143 -NNEIVDVRAKMVIAADGFESE 163 (397)
T ss_dssp -TTEEEEEEEEEEEECCCTTCH
T ss_pred -cccceEEEEeEEEeCCccccH
Confidence 123467999999999998764
No 9
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.60 E-value=8.2e-15 Score=131.33 Aligned_cols=197 Identities=23% Similarity=0.275 Sum_probs=118.4
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
+|||+|||||++|+.+|+.|++. |.+|+|||+.....| .+....+. . ..... .+.++. + .. .+ ..
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~-g~~v~lie~~~~~~G-~~~~~~~~-~-~~~~~---~~~~~~---d-~~-g~---~~ 67 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQK-GVRVGLLTQSLDAVM-MPFLPPKP-P-FPPGS---LLERAY---D-PK-DE---RV 67 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCGGGTT-CCSSCCCS-C-CCTTC---HHHHHC---C-TT-CC---CH
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEecCCCcCC-cccCcccc-c-cchhh---HHhhhc---c-CC-CC---CH
Confidence 58999999999999999999999 999999999842222 22111100 0 00001 112221 0 00 01 34
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCCCCCC-c-
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGA-T- 247 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~~~~-~- 247 (356)
..+.+.|.+.+.+..|++++ +++|+++..+++++.++.+.+ ..+++||.||+|+|.++..-. .
T Consensus 68 ~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~--------------g~~i~a~~VV~A~G~~s~~~~~~G 132 (232)
T 2cul_A 68 WAFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWE--------------GPPARGEKVVLAVGSFLGARLFLG 132 (232)
T ss_dssp HHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETT--------------SCCEECSEEEECCTTCSSCEEEET
T ss_pred HHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECC--------------CCEEECCEEEECCCCChhhceecC
Confidence 56777777777643599998 469999998888887777642 247999999999998653110 0
Q ss_pred ----------------cchhhhccCc-cc----------cccc----ccccccccccceeeeccccccCceeEeceEEEE
Q 018414 248 ----------------GVKRLKSIGM-IE----------EVPG----MKALDMNSAEDAIVRLTREVVPGMIVTGMEVAE 296 (356)
Q Consensus 248 ----------------~~~~~~~~g~-~~----------~~~~----~~~~~~~~~~~~~~~~~~e~~~g~~~~~~~~~~ 296 (356)
-...+...++ .. ..|. ...++....+...+.. ...||+|..|+.+
T Consensus 133 ~~~~~~g~~g~~~~~~l~~~l~~~g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~--t~~p~iya~G~~a-- 208 (232)
T 2cul_A 133 GVVEEAGRLSEASYPDLLEDLSRLGFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRL--KRLEGLYAVGLCV-- 208 (232)
T ss_dssp TEEESEEETTEECCSHHHHHHHHTTCCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEE--TTSBSEEECGGGT--
T ss_pred CccCCCCCCcccchhhhCHHHHhCCCeEEccccccCcCCCCCCccCchhhcccCCCCCccccc--cccccceeeeecc--
Confidence 0111122222 00 0000 0122222222222222 2469999999866
Q ss_pred ecCCcccCCccceeeeehHHHHHHHHHHhC
Q 018414 297 IDGAPRMGPTFGAMMISGQKAAHLALKSLG 326 (356)
Q Consensus 297 ~~g~~~~~~~~g~~l~sG~~~~~l~l~~~~ 326 (356)
..+ .++.++.+|..+++.++++|+
T Consensus 209 ~~g------~~~~~~~~g~~~a~~i~~~l~ 232 (232)
T 2cul_A 209 REG------DYARMSEEGKRLAEHLLHELG 232 (232)
T ss_dssp SCC------CHHHHHHHHHHHHHHHHHHC-
T ss_pred cCc------cHHHHHHHHHHHHHHHHhhcC
Confidence 322 678888999999999998874
No 10
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.59 E-value=1.3e-14 Score=144.87 Aligned_cols=141 Identities=22% Similarity=0.353 Sum_probs=100.5
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCcccc-CCccc---------------------hhh------
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWL-GGQLF---------------------SAM------ 140 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~-~g~~~---------------------~~~------ 140 (356)
.+|||||||+|++|+++|+.|+++ |++|+||||...+||.+.. +|.+. ..+
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~-G~~V~vlEk~~~~GG~s~~s~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~ 118 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARA-GADVLVLERTSGWGGATALAGGFIYLGGGTPLQKACGFDDSPENMKTFMMAALGP 118 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTTGGGSCCCEECCSSCHHHHHTTCCCCHHHHHHHHHHHSCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCCCCCCcchhcCcceecCCCCHHHHHhCCCCCHHHHHHHHHHHhCC
Confidence 369999999999999999999999 9999999999888765532 22110 000
Q ss_pred ---------hc-c-chHHHHHHHhCCCcccc-----------CC-eEE-------------------E-e----------
Q 018414 141 ---------VV-R-KPAHIFLDELGIDYDEQ-----------DN-YVV-------------------I-K---------- 167 (356)
Q Consensus 141 ---------~~-~-~~~~~~l~~~G~~~~~~-----------~~-~~~-------------------~-~---------- 167 (356)
+. . ...++|+.++|++|... .. ... . .
T Consensus 119 ~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~~g~e~~~~~~~~~~~~~r~~~~~~~~~~~g~~ 198 (510)
T 4at0_A 119 GADEEKITDYCEGSVEHYNWLVDCGVPFKESFWGEPGWEPPFDDGLMYSGGENAAPFNEIAAPAPRGHVPQMDGKRTGEK 198 (510)
T ss_dssp SCCHHHHHHHHHTHHHHHHHHHHTTCCCCSCEECSSSSSCSSSCSEECCSSTTSTTGGGTSCCCCCEECCCCSSCBTTTB
T ss_pred CCCHHHHHHHHHhhHHHHHHHHHcCCeecccccCCcccccCCcccccccCcccccccccccCcccceeeecccccccccC
Confidence 00 0 12357888888877543 00 000 0 0
Q ss_pred ch-HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEe-CCeEEEEEEcceeeecccCCCCCCCCeEEEc-CEEEEcCCCCC
Q 018414 168 HA-ALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEA-KVVVSSCGHDG 242 (356)
Q Consensus 168 ~~-~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A-k~VI~AtGg~~ 242 (356)
.. ..+...|.+.+. +.|++|+++++|++|+.+ +++|.||.+.. .++..+|+| |.||+|||+++
T Consensus 199 ~g~~~l~~~L~~~~~-~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~-----------~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 199 GGGYMLMKPLVETAE-KLGVRAEYDMRVQTLVTDDTGRVVGIVAKQ-----------YGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp CTTHHHHHHHHHHHH-HTTCEEECSEEEEEEEECTTCCEEEEEEEE-----------TTEEEEEEEEEEEEECCCCCT
T ss_pred CCHHHHHHHHHHHHH-HcCCEEEecCEeEEEEECCCCcEEEEEEEE-----------CCcEEEEEeCCeEEEeCCChh
Confidence 11 267788888887 469999999999999998 78999998752 112357999 59999999987
No 11
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.57 E-value=1.8e-14 Score=145.70 Aligned_cols=144 Identities=22% Similarity=0.283 Sum_probs=102.9
Q ss_pred CCcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCcccc-CCccch----------------h----h------
Q 018414 88 YADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWL-GGQLFS----------------A----M------ 140 (356)
Q Consensus 88 ~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~-~g~~~~----------------~----~------ 140 (356)
..++||||||+|++|+++|+.|+++ |++|+||||...+|+.+.. ++.+.. . +
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~-G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~ 197 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKA-GANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQ 197 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 3469999999999999999999999 9999999999887765432 221100 0 0
Q ss_pred -----hc------cchHHHHHHHhCCCcccc---C--CeEEE-------echHHHHHHHHHHHHcCCCcEEEcCeEEEEE
Q 018414 141 -----VV------RKPAHIFLDELGIDYDEQ---D--NYVVI-------KHAALFTSTIMSKLLARPNVKLFNAVAAEDL 197 (356)
Q Consensus 141 -----~~------~~~~~~~l~~~G~~~~~~---~--~~~~~-------~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i 197 (356)
+. ....++|+.++|++|... . .++.. .....+...|.+.+. +.|++++++++|++|
T Consensus 198 ~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~-~~gv~i~~~~~v~~l 276 (566)
T 1qo8_A 198 QNDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAK-EQGIDTRLNSRVVKL 276 (566)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHH-HTTCCEECSEEEEEE
T ss_pred CCCHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHH-hcCCEEEeCCEEEEE
Confidence 00 012357888889887531 1 11111 125667788888876 569999999999999
Q ss_pred EEeC-CeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCCC
Q 018414 198 IVKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (356)
Q Consensus 198 ~~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~ 243 (356)
+.++ ++|.+|.+.+ . +++..+++||.||+|||+++.
T Consensus 277 ~~~~~g~v~Gv~~~~-------~---~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 277 VVNDDHSVVGAVVHG-------K---HTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp EECTTSBEEEEEEEE-------T---TTEEEEEEEEEEEECCCCCTT
T ss_pred EECCCCcEEEEEEEe-------C---CCcEEEEEcCEEEEecCCccc
Confidence 9988 8999887742 0 112347999999999999885
No 12
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.57 E-value=3.7e-14 Score=143.49 Aligned_cols=144 Identities=21% Similarity=0.281 Sum_probs=102.3
Q ss_pred CCcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccc-cCCccch----------------hhh---------
Q 018414 88 YADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAW-LGGQLFS----------------AMV--------- 141 (356)
Q Consensus 88 ~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~-~~g~~~~----------------~~~--------- 141 (356)
..++||||||||++|+++|+.|+++ |++|+||||...+|+.+. .++.+.. .++
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~-G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~ 202 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDS-GAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQN 202 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 3469999999999999999999999 999999999988776542 2221100 000
Q ss_pred -cc-----------chHHHHHHHhCCCcccc---C--CeEE--E-----echHHHHHHHHHHHHcCCCcEEEcCeEEEEE
Q 018414 142 -VR-----------KPAHIFLDELGIDYDEQ---D--NYVV--I-----KHAALFTSTIMSKLLARPNVKLFNAVAAEDL 197 (356)
Q Consensus 142 -~~-----------~~~~~~l~~~G~~~~~~---~--~~~~--~-----~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i 197 (356)
.. ...++|+.++|++|... . .++. . .....+...|.+.+. +.|++|+++++|++|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~-~~gv~i~~~~~v~~l 281 (571)
T 1y0p_A 203 INDPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAV-KRNIDLRMNTRGIEV 281 (571)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHH-HTTCEEESSEEEEEE
T ss_pred CCCHHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHH-hcCCEEEeCCEeeEe
Confidence 00 12357888889888531 1 1111 1 124677788888876 569999999999999
Q ss_pred EEeC-CeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCCC
Q 018414 198 IVKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (356)
Q Consensus 198 ~~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~ 243 (356)
+.++ ++|.||.+.+ . +++..+++||.||+|||+++.
T Consensus 282 ~~~~~g~v~Gv~~~~------~----~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 282 LKDDKGTVKGILVKG------M----YKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp EECTTSCEEEEEEEE------T----TTEEEEEECSEEEECCCCCTT
T ss_pred EEcCCCeEEEEEEEe------C----CCcEEEEECCeEEEeCCCccc
Confidence 9887 8898887742 0 112347999999999999874
No 13
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.54 E-value=4.3e-14 Score=144.02 Aligned_cols=145 Identities=23% Similarity=0.279 Sum_probs=102.3
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCcc-ccCCccc-----------hhh----------hcc---
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA-WLGGQLF-----------SAM----------VVR--- 143 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~-~~~g~~~-----------~~~----------~~~--- 143 (356)
.++||||||+|++|++||+.|+++ |.+|+||||....++.+ +.+|.+. ... ...
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~-G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~ 95 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEA-GFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDA 95 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHH
T ss_pred ccCCEEEECccHHHHHHHHHHHHC-CCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHH
Confidence 358999999999999999999999 99999999986544332 2222110 000 000
Q ss_pred --------chHHHHHHHhCCCccccCC--eEE------------------Ee-----chHHHHHHHHHHHHcCCCcEEEc
Q 018414 144 --------KPAHIFLDELGIDYDEQDN--YVV------------------IK-----HAALFTSTIMSKLLARPNVKLFN 190 (356)
Q Consensus 144 --------~~~~~~l~~~G~~~~~~~~--~~~------------------~~-----~~~~~~~~l~~~~~~~~gv~i~~ 190 (356)
...++||.++|++|..... +.. .. ....+...|++.+. +.|++|++
T Consensus 96 v~~l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~-~~gv~i~~ 174 (621)
T 2h88_A 96 IHYMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSL-RYDTSYFV 174 (621)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHT-TSCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHH-hCCCEEEE
Confidence 1235788889998865321 110 00 13467788888876 67999999
Q ss_pred CeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCCCC
Q 018414 191 AVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPF 244 (356)
Q Consensus 191 ~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~~ 244 (356)
++.|++|+.++++|.||.+.+ .. +++...++|+.||+|||+++..
T Consensus 175 ~~~v~~Li~~~g~v~Gv~~~~------~~---~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 175 EYFALDLLMENGECRGVIALC------IE---DGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp TEEEEEEEEETTEEEEEEEEE------TT---TCCEEEEEEEEEEECCCCCGGG
T ss_pred ceEEEEEEEECCEEEEEEEEE------cC---CCcEEEEEcCeEEECCCccccc
Confidence 999999999889999987742 01 1234579999999999998743
No 14
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.53 E-value=8.5e-14 Score=142.79 Aligned_cols=145 Identities=18% Similarity=0.150 Sum_probs=100.9
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCcc-ccCCcc--------------c----hhhh------cc
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA-WLGGQL--------------F----SAMV------VR 143 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~-~~~g~~--------------~----~~~~------~~ 143 (356)
.++||||||||++|+++|+.|++. |.+|+||||....++.+ +..|.+ + ...+ ..
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~-G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~g~~ds~~~~~~dt~~~g~~~~d 82 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQK-GLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDGDNEDLHFMDTVKGSDWGCD 82 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTT-TCCEEEECSSCGGGSGGGGCCSCEECCCCCSGGGTTCCHHHHHHHHHHHTTTCSC
T ss_pred ccccEEEECchHHHHHHHHHHHHC-CCcEEEEeccCCCCCcccccCCCeEeccCCcccCCCCCHHHHHHHHHHhcCCCCC
Confidence 358999999999999999999999 99999999986543322 221110 0 0000 00
Q ss_pred -----------chHHHHHHHhCCCccccCC-----------------------eE----------EE-----echHHHHH
Q 018414 144 -----------KPAHIFLDELGIDYDEQDN-----------------------YV----------VI-----KHAALFTS 174 (356)
Q Consensus 144 -----------~~~~~~l~~~G~~~~~~~~-----------------------~~----------~~-----~~~~~~~~ 174 (356)
...++||.++|++|..... +. .. .....+..
T Consensus 83 ~~~v~~~~~~s~~~i~~L~~~Gv~f~~~~~G~~~~~~~g~~~~~l~~~e~~~~~~~~~~gg~~~~R~~~~~d~tG~~l~~ 162 (660)
T 2bs2_A 83 QKVARMFVNTAPKAIRELAAWGVPWTRIHKGDRMAIINAQKTTITEEDFRHGLIHSRDFGGTKKWRTCYTADATGHTMLF 162 (660)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCBCCSEEEECCCSSCCCEEEECGGGTTSBCCBCCTTCSSCCEECSTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCceecCCCcccccccccccccccchhhhhhhccccccccccceeEeeCCCCHHHHHH
Confidence 1245788889998865321 10 00 01346778
Q ss_pred HHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCCCC
Q 018414 175 TIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPF 244 (356)
Q Consensus 175 ~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~~ 244 (356)
.|++.+. +.|++|++++.|++|+.++++|.||.+.+ .. +++...++||.||+|||+++..
T Consensus 163 ~L~~~a~-~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~------~~---~G~~~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 163 AVANECL-KLGVSIQDRKEAIALIHQDGKCYGAVVRD------LV---TGDIIAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHH-HHTCEEECSEEEEEEEEETTEEEEEEEEE------TT---TCCEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHH-hCCCEEEECcEEEEEEecCCEEEEEEEEE------CC---CCcEEEEEcCEEEEccCcchhh
Confidence 8888876 56999999999999999889999987631 01 1234579999999999998843
No 15
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.52 E-value=1.1e-13 Score=132.61 Aligned_cols=131 Identities=21% Similarity=0.291 Sum_probs=94.5
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCcc-----------
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYD----------- 158 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~----------- 158 (356)
+|||+|||||++|+++|+.|+++ |++|+|+|+...+|+....++.... +.++++|+...
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~-G~~V~l~E~~~~~g~~~~~~~~~~~---------~~~~~lg~~~~~~~~~~~~~~~ 73 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKY-GLKTLMIEKRPEIGSPVRCGEGLSK---------GILNEADIKADRSFIANEVKGA 73 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSTTCSCCSCCEEET---------HHHHHTTCCCCTTTEEEEESEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCCCCCCcccccccCH---------HHHHHcCCCCChHHhhhhcceE
Confidence 58999999999999999999999 9999999999876653333332211 23334433110
Q ss_pred --------------cc---CCeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCC
Q 018414 159 --------------EQ---DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQ 221 (356)
Q Consensus 159 --------------~~---~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~ 221 (356)
.. ..+....+...+.+.|.+.+. +.|++++++++|+++..+++++.+|.+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~gv~i~~~~~v~~i~~~~~~v~gv~~~~---------- 142 (397)
T 3cgv_A 74 RIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAA-KAGADVWVKSPALGVIKENGKVAGAKIRH---------- 142 (397)
T ss_dssp EEECTTCSSCEEEC-----CCCEEEECHHHHHHHHHHHHH-HHTCEEESSCCEEEEEEETTEEEEEEEEE----------
T ss_pred EEEcCCCCEEEEEeccccCCceeEEEeHHHHHHHHHHHHH-hCCCEEEECCEEEEEEEeCCEEEEEEEEE----------
Confidence 00 111233456777788888876 47999999999999999999888777631
Q ss_pred CCCCCeEEEcCEEEEcCCCCC
Q 018414 222 SCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 222 ~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
.++..+++||.||+|+|.++
T Consensus 143 -~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 143 -NNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp -TTEEEEEEEEEEEECCCTTC
T ss_pred -CCeEEEEEcCEEEECCCcch
Confidence 01246899999999999776
No 16
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.50 E-value=4.6e-14 Score=144.74 Aligned_cols=148 Identities=15% Similarity=0.275 Sum_probs=104.2
Q ss_pred CcccEEEECCCHHHHHHHHHhhcC-----CCCeEEEEeccCCCCCccccCC--ccc--------hh--------------
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKN-----PNIQIAIIEQSVSPGGGAWLGG--QLF--------SA-------------- 139 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~-----~G~~V~llEk~~~~Gg~~~~~g--~~~--------~~-------------- 139 (356)
.++||||||+|++||+||+.|++. ||.+|+||||....+++++..| .+. ..
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s~s~AqG~~gi~a~l~~ds~e~~~~~~~~~~~gl~d 100 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERSGAVAQGLSAINTYLGDNNADDYVRMVRTDLMGLVR 100 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTCSTTTTCEEEECCCCTTSCHHHHHHHHHHHTTTCCC
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCCcccccCcchheeecCCCCHHHHHHHHHHhcCCCcc
Confidence 369999999999999999999985 4899999999876555555544 210 00
Q ss_pred -----hhcc--chHHHHHHHhCCCcccc-CC--eE-------------------------EEechHHHHHHHHHHHHcC-
Q 018414 140 -----MVVR--KPAHIFLDELGIDYDEQ-DN--YV-------------------------VIKHAALFTSTIMSKLLAR- 183 (356)
Q Consensus 140 -----~~~~--~~~~~~l~~~G~~~~~~-~~--~~-------------------------~~~~~~~~~~~l~~~~~~~- 183 (356)
.+.. ...++||.++|++|... .. +. .......+...|.+.+.+.
T Consensus 101 ~~~v~~l~~~a~~~i~~L~~~Gv~f~~~~~~G~~~~g~~~~~fg~~~~~gg~~~~r~~~~~~~~G~~i~~~L~~~a~~~~ 180 (662)
T 3gyx_A 101 EDLIYDLGRHVDDSVHLFEEWGLPVWIKDEHGHNLDGAQAKAAGKSLRNGDKPVRSGRWQIMINGESYKVIVAEAAKNAL 180 (662)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCBCEECSSSCEECHHHHHHHTCCTTTTCCBCCSSTTCEEEEETSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCceecCCCCccccchhhhccccccccCccccccceecccCCHHHHHHHHHHHHHhcC
Confidence 0000 12467889999998653 11 11 1112345667777777643
Q ss_pred CCcEEEcCeEEEEEEEeCC---eEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCCCCC
Q 018414 184 PNVKLFNAVAAEDLIVKGG---RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFG 245 (356)
Q Consensus 184 ~gv~i~~~~~v~~i~~~~~---~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~~~ 245 (356)
.|+++++++.|++|+.+++ +|.||.+.+ .. +++...|+|+.||+||||++...
T Consensus 181 ~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~------~~---~g~~~~i~Ak~VVLATGG~g~~y 236 (662)
T 3gyx_A 181 GQDRIIERIFIVKLLLDKNTPNRIAGAVGFN------LR---ANEVHIFKANAMVVACGGAVNVY 236 (662)
T ss_dssp CTTTEECSEEECCCEECSSSTTBEEEEEEEE------SS---SSCEEEEECSEEEECCCCBCSSS
T ss_pred CCcEEEEceEEEEEEEeCCccceEEEEEEEE------cC---CCcEEEEEeCEEEECCCcccccc
Confidence 2999999999999999877 999997632 11 12346799999999999988543
No 17
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.50 E-value=1.4e-13 Score=139.75 Aligned_cols=143 Identities=20% Similarity=0.308 Sum_probs=99.7
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCcc-ccCCccc-----------h----hh------hcc----
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA-WLGGQLF-----------S----AM------VVR---- 143 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~-~~~g~~~-----------~----~~------~~~---- 143 (356)
++||||||+|++|+++|+.|+++ |.+|+||||....++.+ +..|.+. . .. ...
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~-G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v 85 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQS-GQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAI 85 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 58999999999999999999999 99999999987654322 2222110 0 00 000
Q ss_pred -------chHHHHHHHhCCCccccC--CeEE-----------------Ee-----chHHHHHHHHHHHHcCCCcEEEcCe
Q 018414 144 -------KPAHIFLDELGIDYDEQD--NYVV-----------------IK-----HAALFTSTIMSKLLARPNVKLFNAV 192 (356)
Q Consensus 144 -------~~~~~~l~~~G~~~~~~~--~~~~-----------------~~-----~~~~~~~~l~~~~~~~~gv~i~~~~ 192 (356)
...++||.++|++|.... .+.. .. ....+...|.+.+. +.|++|++++
T Consensus 86 ~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~-~~gv~i~~~~ 164 (588)
T 2wdq_A 86 EYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNL-KNHTTIFSEW 164 (588)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHH-HTTCEEEETE
T ss_pred HHHHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHH-hCCCEEEeCc
Confidence 123578888999886531 1110 00 12567788888887 4699999999
Q ss_pred EEEEEEEe-CCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCCC
Q 018414 193 AAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (356)
Q Consensus 193 ~v~~i~~~-~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~ 243 (356)
.|++|+.+ +++|.||.+.+ .. +++..+++||.||+|||+++.
T Consensus 165 ~v~~L~~~~~g~v~Gv~~~~------~~---~g~~~~i~A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 165 YALDLVKNQDGAVVGCTALC------IE---TGEVVYFKARATVLATGGAGR 207 (588)
T ss_dssp EEEEEEECTTSCEEEEEEEE------TT---TCCEEEEEEEEEEECCCCCGG
T ss_pred EEEEEEECCCCEEEEEEEEE------cC---CCeEEEEEcCEEEECCCCCcc
Confidence 99999986 78898887631 01 123457999999999999874
No 18
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.49 E-value=3.5e-13 Score=136.34 Aligned_cols=143 Identities=20% Similarity=0.309 Sum_probs=101.0
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccc-cCCccc----------------hh----h-------
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAW-LGGQLF----------------SA----M------- 140 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~-~~g~~~----------------~~----~------- 140 (356)
.++||+|||+|++|+++|+.|++. |.+|+|+||...+|+... .++.+. .. +
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~-g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~ 203 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDA-GAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNI 203 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSS-SCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 368999999999999999999999 999999999988776542 222110 00 0
Q ss_pred --------hc-c-chHHHHHHHhCCCcccc---C--CeEEE-------echHHHHHHHHHHHHcCCCcEEEcCeEEEEEE
Q 018414 141 --------VV-R-KPAHIFLDELGIDYDEQ---D--NYVVI-------KHAALFTSTIMSKLLARPNVKLFNAVAAEDLI 198 (356)
Q Consensus 141 --------~~-~-~~~~~~l~~~G~~~~~~---~--~~~~~-------~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~ 198 (356)
+. . ...++||.++|++|... . .++.. .....+...|.+.+. +.|++++++++|++|+
T Consensus 204 ~~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~-~~gv~i~~~t~v~~l~ 282 (572)
T 1d4d_A 204 NDPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAV-KRGTDIRLNSRVVRIL 282 (572)
T ss_dssp SCHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHH-HTTCEEESSEEEEEEE
T ss_pred CCHHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHH-HcCCeEEecCEEEEEE
Confidence 00 0 12457888889887531 1 11111 124567788888876 5699999999999999
Q ss_pred EeC-CeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCCC
Q 018414 199 VKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (356)
Q Consensus 199 ~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~ 243 (356)
.++ ++|.||.+.+ . +++..+++||.||+|||+++.
T Consensus 283 ~~~~g~v~GV~~~~-------~---~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 283 EDASGKVTGVLVKG-------E---YTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp EC--CCEEEEEEEE-------T---TTEEEEEECSEEEECCCCCTT
T ss_pred ECCCCeEEEEEEEe-------C---CCcEEEEEcCEEEEeCCCCcc
Confidence 887 8898887742 0 112357999999999999874
No 19
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.49 E-value=1.2e-13 Score=138.85 Aligned_cols=146 Identities=25% Similarity=0.374 Sum_probs=90.9
Q ss_pred CCcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCcc-ccCCccch-------------hhh------c-----
Q 018414 88 YADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA-WLGGQLFS-------------AMV------V----- 142 (356)
Q Consensus 88 ~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~-~~~g~~~~-------------~~~------~----- 142 (356)
..++||||||+|++|+++|+.|++ |.+|+||||....++.+ +.+|.+.. ..+ .
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~--G~~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~ds~~~~~~d~l~~g~g~~d~~~v 83 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD--QHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAV 83 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT--TSCEEEECSSCTTC-------------CCSHHHHHHHHHHHHHHTTTCCCHHHH
T ss_pred CCCCCEEEECccHHHHHHHHHHhc--CCcEEEEECCCCCCCChhhcCCCEEEecCCCCCHHHHHHHHHHhhcccCCHHHH
Confidence 346899999999999999999987 89999999997665433 33332210 000 0
Q ss_pred ------cchHHHHHHHhCCCccccC------CeEE----------Ee-----chHHHHHHHHHHHHcCCCcEEEcCeEEE
Q 018414 143 ------RKPAHIFLDELGIDYDEQD------NYVV----------IK-----HAALFTSTIMSKLLARPNVKLFNAVAAE 195 (356)
Q Consensus 143 ------~~~~~~~l~~~G~~~~~~~------~~~~----------~~-----~~~~~~~~l~~~~~~~~gv~i~~~~~v~ 195 (356)
....++||.++|++|.... .+.. .. ....+...|++.+.+..|+++++++.|+
T Consensus 84 ~~~~~~~~~~i~~l~~~Gv~f~~~~~~~~~g~~~~~~~gg~~~~r~~~~~d~~g~~l~~~L~~~~~~~~gv~i~~~~~v~ 163 (540)
T 1chu_A 84 EFVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERTNAV 163 (540)
T ss_dssp HHHHHHHHHHHHHHHHTTCC--------------------------------------CCCHHHHHHCTTEEEECSEEEE
T ss_pred HHHHHhHHHHHHHHHHcCCCcccCcccCcCCccccccccccccCeEEEeCCCCHHHHHHHHHHHHHcCCCCEEEeCcEEE
Confidence 0124678889999886532 1110 00 1234555667777654799999999999
Q ss_pred EEEE-eCC------eEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCCCC
Q 018414 196 DLIV-KGG------RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPF 244 (356)
Q Consensus 196 ~i~~-~~~------~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~~ 244 (356)
+|+. +++ +|.||.+.+ .. +++..+++||.||+|||+++..
T Consensus 164 ~L~~~~~g~~~~~~~v~Gv~~~~------~~---~G~~~~i~A~~VVlAtGg~~~~ 210 (540)
T 1chu_A 164 DLIVSDKIGLPGTRRVVGAWVWN------RN---KETVETCHAKAVVLATGGASKV 210 (540)
T ss_dssp EEEEGGGTTCCSSCBEEEEEEEE------TT---TTEEEEEECSEEEECCCCCGGG
T ss_pred EEEEcCCCCcccCCEEEEEEEEE------cC---CCcEEEEEcCeEEECCCCcccc
Confidence 9998 546 888887742 01 1123579999999999998843
No 20
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.49 E-value=1.7e-13 Score=140.45 Aligned_cols=145 Identities=20% Similarity=0.335 Sum_probs=97.9
Q ss_pred CcccEEEECCCHHHHHHHHHhh---c-CCCCeEEEEeccCCCCCccccCCcc-----c------------hhh----h--
Q 018414 89 ADTDVVVVGAGSAGLSCAYELS---K-NPNIQIAIIEQSVSPGGGAWLGGQL-----F------------SAM----V-- 141 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La---~-~~G~~V~llEk~~~~Gg~~~~~g~~-----~------------~~~----~-- 141 (356)
.++||||||||++||+||+.|+ + + |.+|+||||....+++.+.+|.. + ..+ .
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~-G~~V~vlEK~~~~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~ 99 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLG-GLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTLD 99 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTT-TCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHHH
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhC-CCeEEEEeCcCCCCCcceecccccccchhhHHHhcCCCCCHHHHHHHHHHH
Confidence 3689999999999999999999 6 8 99999999987543333322210 0 000 0
Q ss_pred ----cc-----------chHHHHHHHhCCCccccCC--eE------EEechHHHHHHHHHHHHcCC-Cc-EEEcCeEEEE
Q 018414 142 ----VR-----------KPAHIFLDELGIDYDEQDN--YV------VIKHAALFTSTIMSKLLARP-NV-KLFNAVAAED 196 (356)
Q Consensus 142 ----~~-----------~~~~~~l~~~G~~~~~~~~--~~------~~~~~~~~~~~l~~~~~~~~-gv-~i~~~~~v~~ 196 (356)
.. ...++||.++|++|..... +. .......+...|.+.+. +. |+ ++++++.|++
T Consensus 100 g~~l~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~~~~~~g~~~~~~l~~~~~-~~~gv~~i~~~~~v~~ 178 (643)
T 1jnr_A 100 MMGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAAK-MAVGEENIYERVFIFE 178 (643)
T ss_dssp TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCBCBSSSSCEEEEETTHHHHHHHHHH-HHHCGGGEECSEEEEE
T ss_pred hcCcCcHHHHHHHHHHHHHHHHHHHHcCCcceeCCCCCccCCCccccCCCcHHHHHHHHHHHH-hcCCCcEEEecCEEEE
Confidence 00 1235788889999864321 11 11122345556666665 44 89 9999999999
Q ss_pred EEEeCC---eEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCCCC
Q 018414 197 LIVKGG---RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPF 244 (356)
Q Consensus 197 i~~~~~---~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~~ 244 (356)
|+.+++ +|.||.+.+ .. +++...++||.||+|||+++..
T Consensus 179 L~~~~~~~g~v~Gv~~~~------~~---~g~~~~i~A~~VVlAtGG~~~~ 220 (643)
T 1jnr_A 179 LLKDNNDPNAVAGAVGFS------VR---EPKFYVFKAKAVILATGGATLL 220 (643)
T ss_dssp EEECTTCTTBEEEEEEEE------SS---SSCEEEEECSEEEECCCCBCSS
T ss_pred EEEcCCccceeEEEEEEE------ec---CCcEEEEEcCEEEECCCccccc
Confidence 999877 999987631 11 1233579999999999998854
No 21
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.48 E-value=9.8e-14 Score=139.21 Aligned_cols=137 Identities=17% Similarity=0.232 Sum_probs=96.4
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCC---------------------------ccccCCccchhhhc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGG---------------------------GAWLGGQLFSAMVV 142 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg---------------------------~~~~~g~~~~~~~~ 142 (356)
++||+|||||++|+++|+.|++. |++|+|||++..+++ +.|..+.+......
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~-G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~ 185 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQM-GFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKD 185 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHT-TCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEecc
Confidence 58999999999999999999999 999999999864411 11211212111111
Q ss_pred ----cchHHHHHHHhCCCccccCC-eEE--EechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeee
Q 018414 143 ----RKPAHIFLDELGIDYDEQDN-YVV--IKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVS 215 (356)
Q Consensus 143 ----~~~~~~~l~~~G~~~~~~~~-~~~--~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~ 215 (356)
.....+++.++|.+...... .+. ......+...|.+.+. +.|++++++++|+++..+++++.+|.+.+
T Consensus 186 ~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~-~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~---- 260 (549)
T 3nlc_A 186 PNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATII-ELGGEIRFSTRVDDLHMEDGQITGVTLSN---- 260 (549)
T ss_dssp TTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHH-HTTCEEESSCCEEEEEESSSBEEEEEETT----
T ss_pred ccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHH-hcCCEEEeCCEEEEEEEeCCEEEEEEECC----
Confidence 12345667778876443211 111 1233566777777776 46999999999999999888888888753
Q ss_pred cccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 216 MNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 216 ~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
..+++|+.||+|+|+.+
T Consensus 261 ----------G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 261 ----------GEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp ----------SCEEECSCEEECCCTTC
T ss_pred ----------CCEEECCEEEECCCCCh
Confidence 35799999999999876
No 22
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.47 E-value=2.7e-13 Score=137.85 Aligned_cols=144 Identities=21% Similarity=0.238 Sum_probs=99.5
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCC--CeEEEEeccCCCCCc-cccCCccc---------h----hh------hcc----
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPN--IQIAIIEQSVSPGGG-AWLGGQLF---------S----AM------VVR---- 143 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G--~~V~llEk~~~~Gg~-~~~~g~~~---------~----~~------~~~---- 143 (356)
++||||||||++|+++|+.|++. | .+|+||||....++. .+..|.+. . .. ...
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~-G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v 83 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQA-NPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVV 83 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH-CTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhc-CCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 58999999999999999999998 8 999999998654332 22222111 0 00 000
Q ss_pred -------chHHHHHHHhCCCccccCC--eE----------EEec-----hHHHHHHHHHHHHcCCC-cEEEcCeEEEEEE
Q 018414 144 -------KPAHIFLDELGIDYDEQDN--YV----------VIKH-----AALFTSTIMSKLLARPN-VKLFNAVAAEDLI 198 (356)
Q Consensus 144 -------~~~~~~l~~~G~~~~~~~~--~~----------~~~~-----~~~~~~~l~~~~~~~~g-v~i~~~~~v~~i~ 198 (356)
...++||.++|++|..... +. ...+ ...+...|++.+. +.+ +++++++.|++|+
T Consensus 84 ~~~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~-~~gnv~i~~~~~v~~l~ 162 (602)
T 1kf6_A 84 DYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSL-QFPQIQRFDEHFVLDIL 162 (602)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHT-TCTTEEEEETEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHH-hCCCcEEEeCCEEEEEE
Confidence 1245788889998865321 10 0111 3567788888876 456 9999999999999
Q ss_pred EeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCCCC
Q 018414 199 VKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPF 244 (356)
Q Consensus 199 ~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~~ 244 (356)
.++++|.|+.+.+ .. +++...++|+.||+|||+++..
T Consensus 163 ~~~g~v~Gv~~~~------~~---~G~~~~i~A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 163 VDDGHVRGLVAMN------MM---EGTLVQIRANAVVMATGGAGRV 199 (602)
T ss_dssp EETTEEEEEEEEE------TT---TTEEEEEECSCEEECCCCCGGG
T ss_pred EeCCEEEEEEEEE------cC---CCcEEEEEcCeEEECCCCCccc
Confidence 9989998886531 01 1123479999999999998754
No 23
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.47 E-value=4.7e-13 Score=126.59 Aligned_cols=139 Identities=17% Similarity=0.178 Sum_probs=88.5
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCC-cc-ccCCccch-----------hhhcc-------------
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGG-GA-WLGGQLFS-----------AMVVR------------- 143 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg-~~-~~~g~~~~-----------~~~~~------------- 143 (356)
++||+|||||++|+++|++|+++ |++|+||||...+++ .+ .+.+.+.. .+...
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~-G~~V~vlE~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAG-GHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAARG 82 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSSCSTTSSSCCEECCCCSSCTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCCCCccCcCCccccccCccCCCCCHhHHHHHHHHHHHHHHHHHcC
Confidence 58999999999999999999999 999999999864432 22 22221100 00000
Q ss_pred --------------c-------hHHHHHHHhCCC-cccc---------CC------eE----EEechHHHHHHHHHHHHc
Q 018414 144 --------------K-------PAHIFLDELGID-YDEQ---------DN------YV----VIKHAALFTSTIMSKLLA 182 (356)
Q Consensus 144 --------------~-------~~~~~l~~~G~~-~~~~---------~~------~~----~~~~~~~~~~~l~~~~~~ 182 (356)
. ...+++..+|++ +... .. .+ ...+...+...|.+.+.
T Consensus 83 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~- 161 (369)
T 3dme_A 83 VPHQRLGKLIVATSDAEASQLDSIARRAGANGVDDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAYQGDAE- 161 (369)
T ss_dssp CCEECCCEEEEECSHHHHTTHHHHHHHHHHTTCCCCEEEEHHHHHHHCTTCCCSEEEEETTCEEECHHHHHHHHHHHHH-
T ss_pred CCcccCCEEEEecCHHHHHHHHHHHHHHHHcCCCceeecCHHHHHHhCCCceeeeeeECCCCEEECHHHHHHHHHHHHH-
Confidence 0 011222334443 2110 00 00 12245677788888876
Q ss_pred CCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 183 RPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 183 ~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
+.|++++++++|+++..+++.++.|.+.+ ++..+++||.||+|+|.++
T Consensus 162 ~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~------------g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 162 SDGAQLVFHTPLIAGRVRPEGGFELDFGG------------AEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HTTCEEECSCCEEEEEECTTSSEEEEECT------------TSCEEEEEEEEEECCGGGH
T ss_pred HCCCEEECCCEEEEEEEcCCceEEEEECC------------CceeEEEeCEEEECCCcch
Confidence 57999999999999998876533455531 2236899999999999664
No 24
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.46 E-value=4.4e-13 Score=132.53 Aligned_cols=136 Identities=18% Similarity=0.275 Sum_probs=96.1
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCc-cccCCccc---------hhhh----------c---------
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGG-AWLGGQLF---------SAMV----------V--------- 142 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~-~~~~g~~~---------~~~~----------~--------- 142 (356)
||+|||+|++|+++|+.|++. |++|+||||. ..++. .|.+|.+. ...+ .
T Consensus 1 DVvVIG~G~AGl~aA~~la~~-G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~ 78 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRA-GKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVT 78 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHC-CCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHH
Confidence 899999999999999999999 9999999999 44443 33333211 0000 0
Q ss_pred --cchHHHHHHHhCCCcccc----C--CeEEEe-----chHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEE
Q 018414 143 --RKPAHIFLDELGIDYDEQ----D--NYVVIK-----HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVT 209 (356)
Q Consensus 143 --~~~~~~~l~~~G~~~~~~----~--~~~~~~-----~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~ 209 (356)
....++|+.++|++|+.. . .++... ....+...|++.+. +.|+++++++.| ++..+++++.++.+
T Consensus 79 ~~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~-~~gv~i~~~~~v-~l~~~~~~v~Gv~v 156 (472)
T 2e5v_A 79 SEAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAR-EEGIPIIEDRLV-EIRVKDGKVTGFVT 156 (472)
T ss_dssp HHHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHH-HTTCCEECCCEE-EEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHH-hCCCEEEECcEE-EEEEeCCEEEEEEE
Confidence 012357888899988651 1 111111 24567778888874 679999999999 99988889988876
Q ss_pred cceeeecccCCCCCCCCeEEEcCEEEEcCCCCCCC
Q 018414 210 NWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPF 244 (356)
Q Consensus 210 ~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~~ 244 (356)
.+ +..+++||.||+|||+++..
T Consensus 157 ~~-------------~~g~~~a~~VVlAtGg~~~~ 178 (472)
T 2e5v_A 157 EK-------------RGLVEDVDKLVLATGGYSYL 178 (472)
T ss_dssp TT-------------TEEECCCSEEEECCCCCGGG
T ss_pred Ee-------------CCCeEEeeeEEECCCCCccc
Confidence 31 12347799999999998743
No 25
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.46 E-value=6.1e-13 Score=130.66 Aligned_cols=136 Identities=24% Similarity=0.381 Sum_probs=94.5
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCC-CccccCCccchhhhccchHHHHHHHhCCCccc---------
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPG-GGAWLGGQLFSAMVVRKPAHIFLDELGIDYDE--------- 159 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~G-g~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~--------- 159 (356)
++||+|||||++|+++|+.|+++ |++|+|+||...+. +..+.++.+ ..+.++++|+....
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~-G~~V~vlE~~~~~~~g~~~~g~~l---------~~~~l~~lg~~~~~~~~~~~~~~ 75 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRR-GLKILLVDSKPWNRIGDKPCGDAV---------SKAHFDKLGMPYPKGEELENKIN 75 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSS-SCCEEEECSSCGGGTTCSCCCCEE---------EHHHHHHTTCCCCCGGGEEEEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCCCCCCcccccccc---------cHHHHHHhcCCCCchHHHHhhhc
Confidence 58999999999999999999999 99999999987542 222222211 12344444432110
Q ss_pred -------cC-------CeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCC
Q 018414 160 -------QD-------NYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMD 225 (356)
Q Consensus 160 -------~~-------~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~ 225 (356)
.. ......+...+.+.|.+.+. +.|++++++++|+++..+++++.+|.+.. .. +|+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~-~~gv~i~~~~~v~~i~~~~~~v~gv~~~~------~~---~G~ 145 (453)
T 3atr_A 76 GIKLYSPDMQTVWTVNGEGFELNAPLYNQRVLKEAQ-DRGVEIWDLTTAMKPIFEDGYVKGAVLFN------RR---TNE 145 (453)
T ss_dssp EEEEECTTSSCEEEEEEEEEEECHHHHHHHHHHHHH-HTTCEEESSEEEEEEEEETTEEEEEEEEE------TT---TTE
T ss_pred ceEEECCCCceEEeECCCcEEEcHHHHHHHHHHHHH-HcCCEEEeCcEEEEEEEECCEEEEEEEEE------cC---CCc
Confidence 00 01123456778888888887 47999999999999999888888776641 00 112
Q ss_pred CeEEEcCEEEEcCCCCCCCC
Q 018414 226 PNVMEAKVVVSSCGHDGPFG 245 (356)
Q Consensus 226 ~~~i~Ak~VI~AtGg~~~~~ 245 (356)
..+++||.||+|+|..+.+.
T Consensus 146 ~~~~~ad~VV~AdG~~s~vr 165 (453)
T 3atr_A 146 ELTVYSKVVVEATGYSRSFR 165 (453)
T ss_dssp EEEEECSEEEECCGGGCTTG
T ss_pred eEEEEcCEEEECcCCchhhH
Confidence 34799999999999877543
No 26
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.46 E-value=8.5e-13 Score=131.73 Aligned_cols=143 Identities=17% Similarity=0.227 Sum_probs=95.5
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchh----hhccchHHHHHHHhCCCccc-----
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSA----MVVRKPAHIFLDELGIDYDE----- 159 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~----~~~~~~~~~~l~~~G~~~~~----- 159 (356)
.++||+|||||++|+++|+.|+++ |++|+||||...+... .+..+... ++......+.+...++.+..
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~-G~~V~liE~~~~~~~~--~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~ 82 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMR-GHRVLLLEREAFPRHQ--IGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFR 82 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSCSSCCC--SCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEE
T ss_pred ccCCEEEECcCHHHHHHHHHHHhC-CCCEEEEccCCCCCCC--CCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEE
Confidence 358999999999999999999999 9999999998743321 11111111 11001111223333322111
Q ss_pred ------------------cCCeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCC
Q 018414 160 ------------------QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQ 221 (356)
Q Consensus 160 ------------------~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~ 221 (356)
...+....+...+.+.|.+.+. +.|++++++++|+++..+++++.+|.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~-~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~---------- 151 (512)
T 3e1t_A 83 WGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSE-RKGVDVRERHEVIDVLFEGERAVGVRYRN---------- 151 (512)
T ss_dssp CSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHH-HTTCEEESSCEEEEEEEETTEEEEEEEEC----------
T ss_pred ecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHH-hCCCEEEcCCEEEEEEEECCEEEEEEEEe----------
Confidence 0112333456778888888886 47999999999999999999888887642
Q ss_pred CCCCCeEEEcCEEEEcCCCCCCCC
Q 018414 222 SCMDPNVMEAKVVVSSCGHDGPFG 245 (356)
Q Consensus 222 ~~g~~~~i~Ak~VI~AtGg~~~~~ 245 (356)
.+|+..+++||.||+|+|.++.+.
T Consensus 152 ~dG~~~~i~ad~VI~AdG~~S~vr 175 (512)
T 3e1t_A 152 TEGVELMAHARFIVDASGNRTRVS 175 (512)
T ss_dssp SSSCEEEEEEEEEEECCCTTCSSG
T ss_pred CCCCEEEEEcCEEEECCCcchHHH
Confidence 012235899999999999887543
No 27
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.43 E-value=1.6e-12 Score=125.86 Aligned_cols=137 Identities=20% Similarity=0.216 Sum_probs=88.3
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchh---hhccchHHHHHHHhCCCccc------c
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSA---MVVRKPAHIFLDELGIDYDE------Q 160 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~---~~~~~~~~~~l~~~G~~~~~------~ 160 (356)
++||+|||||++|+++|+.|+++ |++|+|+||...+... .+..+... .+......+.+.+.++.+.. .
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~-G~~V~v~E~~~~~~~~--~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 81 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKS-GFKVKIVEKQKFPRFV--IGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRG 81 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSCSSCCC--SCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEET
T ss_pred cCcEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCCCCCc--ccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeC
Confidence 58999999999999999999999 9999999998644311 11111110 00001112233333322110 0
Q ss_pred ---------------CCeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEE-EEEEcceeeecccCCCCCC
Q 018414 161 ---------------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVG-GVVTNWALVSMNHDTQSCM 224 (356)
Q Consensus 161 ---------------~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~-gv~~~~~~~~~~~~~~~~g 224 (356)
..+....+...+.+.|.+.+. +.|++++++++|+++..+++.+. .+...+ |
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~-~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~------------g 148 (421)
T 3nix_A 82 KEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAA-RQGVDVEYEVGVTDIKFFGTDSVTTIEDIN------------G 148 (421)
T ss_dssp TEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHH-HHTCEEECSEEEEEEEEETTEEEEEEEETT------------S
T ss_pred CeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHH-hCCCEEEcCCEEEEEEEeCCEEEEEEEcCC------------C
Confidence 112334456788888888876 45999999999999998876543 233221 2
Q ss_pred CCeEEEcCEEEEcCCCCC
Q 018414 225 DPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 225 ~~~~i~Ak~VI~AtGg~~ 242 (356)
+..+++||.||+|+|..+
T Consensus 149 ~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 149 NKREIEARFIIDASGYGR 166 (421)
T ss_dssp CEEEEEEEEEEECCGGGC
T ss_pred CEEEEEcCEEEECCCCch
Confidence 234799999999999665
No 28
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.42 E-value=8.5e-13 Score=125.64 Aligned_cols=136 Identities=17% Similarity=0.162 Sum_probs=89.7
Q ss_pred CCcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCC-CccccCCccc--------------------h----h---
Q 018414 88 YADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPG-GGAWLGGQLF--------------------S----A--- 139 (356)
Q Consensus 88 ~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~G-g~~~~~g~~~--------------------~----~--- 139 (356)
..++||+|||||++|+++|++|+ + |++|+||||...+| +.++..+..+ . .
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La-~-G~~V~vlE~~~~~g~~as~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 84 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLS-A-HGRVVVLEREAQPGYHSTGRSAAHYTVAYGTPQVRALTAASRAFFDNPPAGFCE 84 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHT-T-TSCEEEECSSSSTTSSGGGSCCCEECSSSSCHHHHHHHHHHHHHHHSCCTTSCS
T ss_pred CCcCCEEEECCcHHHHHHHHHHh-C-CCCEEEEECCCCccccccccccceeecccCCHHHHHHHHHHHHHHHHhhhhhCC
Confidence 34689999999999999999999 7 99999999987665 3222111100 0 0
Q ss_pred --hhc---------cc------hHHHHHHHhCCCcccc------------------CCeE----EEechHHHHHHHHHHH
Q 018414 140 --MVV---------RK------PAHIFLDELGIDYDEQ------------------DNYV----VIKHAALFTSTIMSKL 180 (356)
Q Consensus 140 --~~~---------~~------~~~~~l~~~G~~~~~~------------------~~~~----~~~~~~~~~~~l~~~~ 180 (356)
.+. .. ...+++..+|+++... ..+. ...+...+...|.+.+
T Consensus 85 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a 164 (381)
T 3nyc_A 85 HPLLSPRPEMVVDFSDDPEELRRQYESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDALHQGYLRGI 164 (381)
T ss_dssp SCSEEECCEEEECSSCCHHHHHHHHHHHHHHCTTCEEECHHHHHHHSTTBCGGGCCCEEEETTCEEECHHHHHHHHHHHH
T ss_pred cccccccceEEEechHHHHHHHHHHHHHHHcCCCcEEeCHHHHHHhCCCcccccceEEEEcCCCceECHHHHHHHHHHHH
Confidence 000 00 1123344455533210 0000 1235678888888888
Q ss_pred HcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 181 LARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 181 ~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
. +.|++++++++|++|..++++ ++|.+. ..+++||.||+|+|+++
T Consensus 165 ~-~~Gv~i~~~~~V~~i~~~~~~-~~V~t~---------------~g~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 165 R-RNQGQVLCNHEALEIRRVDGA-WEVRCD---------------AGSYRAAVLVNAAGAWC 209 (381)
T ss_dssp H-HTTCEEESSCCCCEEEEETTE-EEEECS---------------SEEEEESEEEECCGGGH
T ss_pred H-HCCCEEEcCCEEEEEEEeCCe-EEEEeC---------------CCEEEcCEEEECCChhH
Confidence 7 569999999999999988876 445543 24799999999999664
No 29
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.42 E-value=1.2e-12 Score=125.98 Aligned_cols=133 Identities=17% Similarity=0.242 Sum_probs=87.6
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCC---------Ccc-
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGI---------DYD- 158 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~---------~~~- 158 (356)
.++||+|||||++|+++|+.|+++ |++|+|+||...+..... +..+ .....+.++++|+ ++.
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~-G~~V~viE~~~~~~~~~~-~~~l------~~~~~~~l~~~g~~~~~~~~~~~~~~ 76 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQ-GHRVVVVEQARRERAING-ADLL------KPAGIRVVEAAGLLAEVTRRGGRVRH 76 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCCC---CC-CCEE------CHHHHHHHHHTTCHHHHHHTTCEEEC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCCCCCccCc-eeeE------CchHHHHHHHcCcHHHHHHhCCCcce
Confidence 358999999999999999999999 999999999865421111 1011 1111222233222 111
Q ss_pred -----ccC--------------CeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEE-EEEEcceeeeccc
Q 018414 159 -----EQD--------------NYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVG-GVVTNWALVSMNH 218 (356)
Q Consensus 159 -----~~~--------------~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~-gv~~~~~~~~~~~ 218 (356)
... .+....+...+.+.|.+.+.+..|++++++++|+++..+++.+. .+.+.+
T Consensus 77 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~------- 149 (399)
T 2x3n_A 77 ELEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLND------- 149 (399)
T ss_dssp EEEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETT-------
T ss_pred eEEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECC-------
Confidence 000 11223455778888888886334999999999999998877653 444432
Q ss_pred CCCCCCCCeEEEcCEEEEcCCCCCC
Q 018414 219 DTQSCMDPNVMEAKVVVSSCGHDGP 243 (356)
Q Consensus 219 ~~~~~g~~~~i~Ak~VI~AtGg~~~ 243 (356)
+.+++||.||+|+|.++.
T Consensus 150 -------g~~~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 150 -------GRVLRPRVVVGADGIASY 167 (399)
T ss_dssp -------SCEEEEEEEEECCCTTCH
T ss_pred -------CCEEECCEEEECCCCChH
Confidence 247999999999997764
No 30
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.41 E-value=2e-12 Score=123.45 Aligned_cols=136 Identities=18% Similarity=0.269 Sum_probs=90.5
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCcc-ccCCccch-------------------hh-------hc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA-WLGGQLFS-------------------AM-------VV 142 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~-~~~g~~~~-------------------~~-------~~ 142 (356)
++||+|||||++|+++|++|+++ |++|+|||+....++.+ .+.|.+.. .+ +.
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~-G~~V~lle~~~~~~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~ 83 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKR-GEEVTVIEKRFIGSGSTFRCGTGIRQQFNDEANVRVMKRSVELWKKYSEEYGFSFK 83 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSTTCSHHHHCCCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCCCCccccccCeeeecCCChHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 58999999999999999999999 99999999985333322 22221110 00 00
Q ss_pred ---------cc-------hHHHHHHHhCCCcccc--------------CCe--EE------EechHHHHHHHHHHHHcCC
Q 018414 143 ---------RK-------PAHIFLDELGIDYDEQ--------------DNY--VV------IKHAALFTSTIMSKLLARP 184 (356)
Q Consensus 143 ---------~~-------~~~~~l~~~G~~~~~~--------------~~~--~~------~~~~~~~~~~l~~~~~~~~ 184 (356)
.. ...+++.++|+++... ..+ .. ..+...+...|.+.+. +.
T Consensus 84 ~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~ 162 (382)
T 1y56_B 84 QTGYLFLLYDDEEVKTFKRNIEIQNKFGVPTKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEATTAFAVKAK-EY 162 (382)
T ss_dssp CCCEEEEECSHHHHHHHHHHHHHHHHTTCCCEEECHHHHHHSSTTCCCTTCCEEEEETTCCEECHHHHHHHHHHHHH-HT
T ss_pred ccceEEEEeCHHHHHHHHHHHHHHHhcCCCcEEeCHHHHHHhCCCCCcccceEEEEcCCCeeECHHHHHHHHHHHHH-HC
Confidence 00 0112233445443210 000 00 1245677788888876 57
Q ss_pred CcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 185 NVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 185 gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
|++++++++|+++..+++++.+|.+.+ .+++||.||+|+|.++
T Consensus 163 Gv~i~~~~~v~~i~~~~~~v~gv~~~~---------------g~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 163 GAKLLEYTEVKGFLIENNEIKGVKTNK---------------GIIKTGIVVNATNAWA 205 (382)
T ss_dssp TCEEECSCCEEEEEESSSBEEEEEETT---------------EEEECSEEEECCGGGH
T ss_pred CCEEECCceEEEEEEECCEEEEEEECC---------------cEEECCEEEECcchhH
Confidence 999999999999998888888777642 3799999999999765
No 31
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.39 E-value=3.3e-12 Score=124.46 Aligned_cols=138 Identities=18% Similarity=0.171 Sum_probs=92.1
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccCCCCCccccC-----------Cccch------hh----------
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSVSPGGGAWLG-----------GQLFS------AM---------- 140 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~~~Gg~~~~~-----------g~~~~------~~---------- 140 (356)
.++||||||||++|+++|++|+++ |+ +|+||||....++..... ...+. .+
T Consensus 5 ~~~dVvIIGgG~aGlsaA~~La~~-G~~~V~vlE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 83 (438)
T 3dje_A 5 KSSSLLIVGAGTWGTSTALHLARR-GYTNVTVLDPYPVPSAISAGNDVNKVISSGQYSNNKDEIEVNEILAEEAFNGWKN 83 (438)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT-TCCCEEEEESSCSSCTTCTTCSSCEEECCCCSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHc-CCCcEEEEeCCCCCCCCccCCCCccEEEeccCCchhhhcchhHHHHHHHHHHHhh
Confidence 368999999999999999999999 99 999999987655432110 00000 00
Q ss_pred -------hcc---------chHHHHHHH-----hCCCcc-c---------------c----C--CeE-----EEechHHH
Q 018414 141 -------VVR---------KPAHIFLDE-----LGIDYD-E---------------Q----D--NYV-----VIKHAALF 172 (356)
Q Consensus 141 -------~~~---------~~~~~~l~~-----~G~~~~-~---------------~----~--~~~-----~~~~~~~~ 172 (356)
+.. ....+.+.+ ++..+. . . . .++ ...+...+
T Consensus 84 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~l~~~~~~g~~g~~~~~~~g~~~~~~~ 163 (438)
T 3dje_A 84 DPLFKPYYHDTGLLMSACSQEGLDRLGVRVRPGEDPNLVELTRPEQFRKLAPEGVLQGDFPGWKGYFARSGAGWAHARNA 163 (438)
T ss_dssp CTTTGGGEECCCEEEEECSHHHHHHHHHHHCGGGCTTCEEECSHHHHHTTSCTTTSCSCCTTCEEEEESSSCEEECHHHH
T ss_pred CccccCcEeccceEEEecCcchHHHHHHHHhhcccCCceecCCHHHHHHhCCcccccCCCCCceEEEeCCCCEEecHHHH
Confidence 000 011122221 132220 0 0 0 111 12235678
Q ss_pred HHHHHHHHHcCCCcEEEcCe---EEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 173 TSTIMSKLLARPNVKLFNAV---AAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 173 ~~~l~~~~~~~~gv~i~~~~---~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
...|.+.+. +.|++|++++ +|++|..+++++.+|.+.+ ..+++||.||+|+|+++
T Consensus 164 ~~~L~~~a~-~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~--------------G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 164 LVAAAREAQ-RMGVKFVTGTPQGRVVTLIFENNDVKGAVTAD--------------GKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHH-HTTCEEEESTTTTCEEEEEEETTEEEEEEETT--------------TEEEECSEEEECCGGGG
T ss_pred HHHHHHHHH-hcCCEEEeCCcCceEEEEEecCCeEEEEEECC--------------CCEEECCEEEECCCCCh
Confidence 888888886 5799999999 9999999999999888752 35799999999999876
No 32
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.39 E-value=4.1e-12 Score=131.00 Aligned_cols=137 Identities=14% Similarity=0.165 Sum_probs=89.0
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCC-ccc-cCCccchhhhcc------------chHHHHHH----
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGG-GAW-LGGQLFSAMVVR------------KPAHIFLD---- 151 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg-~~~-~~g~~~~~~~~~------------~~~~~~l~---- 151 (356)
.+||+|||||++|+++|+.|+++ |++|+||||...+|+ .++ .+|.+....... ....++++
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~-G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRR-GWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPV 350 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHHHHCCC
Confidence 48999999999999999999999 999999999766653 222 222211100000 00111122
Q ss_pred --------------------------HhCCCcc---c--------------c-CCeE----EEechHHHHHHHHHHHHcC
Q 018414 152 --------------------------ELGIDYD---E--------------Q-DNYV----VIKHAALFTSTIMSKLLAR 183 (356)
Q Consensus 152 --------------------------~~G~~~~---~--------------~-~~~~----~~~~~~~~~~~l~~~~~~~ 183 (356)
..+++.. . . .... ...+...+...|.+.+. +
T Consensus 351 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~~a~-~ 429 (676)
T 3ps9_A 351 KFDHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQ-Q 429 (676)
T ss_dssp CCCEECCCEEEECCSHHHHHHHHHHHTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHHHHH-H
T ss_pred CcCcCcCCeeeecCCHHHHHHHHHHHhcCCcHHHhhhCCHHHHHHhhCCCccCCcEEecCCeeeCHHHHHHHHHHHHH-h
Confidence 2233211 0 0 0000 12245678888888876 5
Q ss_pred CCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCCC
Q 018414 184 PNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (356)
Q Consensus 184 ~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~ 243 (356)
.|++++++++|++|..+++++ .|.+.+ +.+++||.||+|+|+++.
T Consensus 430 ~Gv~i~~~t~V~~l~~~~~~v-~V~t~~--------------G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 430 QGLQIYYQYQLQNFSRKDDCW-LLNFAG--------------DQQATHSVVVLANGHQIS 474 (676)
T ss_dssp TTCEEEESCCEEEEEEETTEE-EEEETT--------------SCEEEESEEEECCGGGGG
T ss_pred CCCEEEeCCeeeEEEEeCCeE-EEEECC--------------CCEEECCEEEECCCcchh
Confidence 699999999999999988875 455532 356999999999998763
No 33
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.38 E-value=5.9e-12 Score=125.31 Aligned_cols=135 Identities=20% Similarity=0.188 Sum_probs=90.1
Q ss_pred CCcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCC-----------
Q 018414 88 YADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGID----------- 156 (356)
Q Consensus 88 ~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~----------- 156 (356)
++++||+|||||++|+++|+.|+++ |++|+||||...++.... + ........+.|+++|+.
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~-G~~v~vlE~~~~~~~~~r--~-----~~l~~~~~~~l~~lGl~~~~~~~~~~~~ 80 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLA-GVEVVVLERLVERTGESR--G-----LGFTARTMEVFDQRGILPRFGEVETSTQ 80 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCCC-CCCCC--S-----EEECHHHHHHHHTTTCGGGGCSCCBCCE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCCCCCCCC--c-----ceECHHHHHHHHHCCCHHHHHhcccccc
Confidence 4469999999999999999999999 999999999876542211 0 11112223344444331
Q ss_pred -------ccc--c---CCeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCC
Q 018414 157 -------YDE--Q---DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCM 224 (356)
Q Consensus 157 -------~~~--~---~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g 224 (356)
++. . ..+....+...+.+.|.+.+. +.|++++++++|+++..+++.+. +.+.++ .+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~-~~gv~v~~~~~v~~i~~~~~~v~-v~~~~~----------~g 148 (500)
T 2qa1_A 81 GHFGGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWAT-GLGADIRRGHEVLSLTDDGAGVT-VEVRGP----------EG 148 (500)
T ss_dssp EEETTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHH-HTTCEEEETCEEEEEEEETTEEE-EEEEET----------TE
T ss_pred ccccceecccccCCCCCCceeecCHHHHHHHHHHHHH-HCCCEEECCcEEEEEEEcCCeEE-EEEEcC----------CC
Confidence 100 0 012233445677778888776 46999999999999999888765 443320 01
Q ss_pred CCeEEEcCEEEEcCCCCCC
Q 018414 225 DPNVMEAKVVVSSCGHDGP 243 (356)
Q Consensus 225 ~~~~i~Ak~VI~AtGg~~~ 243 (356)
..+++||+||.|+|+++.
T Consensus 149 -~~~~~a~~vVgADG~~S~ 166 (500)
T 2qa1_A 149 -KHTLRAAYLVGCDGGRSS 166 (500)
T ss_dssp -EEEEEESEEEECCCTTCH
T ss_pred -CEEEEeCEEEECCCcchH
Confidence 247999999999997763
No 34
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.38 E-value=2.2e-12 Score=130.16 Aligned_cols=143 Identities=23% Similarity=0.267 Sum_probs=91.0
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccc-------hh----hhcc--------------
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLF-------SA----MVVR-------------- 143 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~-------~~----~~~~-------------- 143 (356)
.+|||+|||||++|+++|+.|+++ |++|+||||+...+|++.....+. .. +...
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~-G~~V~LlEk~d~~~GtS~~ss~lihgG~ryl~~~~~~l~~e~~~e~~~l~~~ap~ 95 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVR-GIQTGLVEMNDFASGTSSRSTKLVHGGLRYLKQFEIKLVAEVGKERAIVYENAPH 95 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTT-TCCEEEEESSSTTCSGGGSSCCEECC---------------CHHHHHHHHHHCTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCcEEEEECCCCCCCcccCCcCccccchHHHHhcCHHHHHHHHHHHHHHHHhCch
Confidence 469999999999999999999999 999999999976655443221110 00 0000
Q ss_pred ------------c--hHHHHHHHhCCC----------------------------cccc---CCe---EEEechHHHHHH
Q 018414 144 ------------K--PAHIFLDELGID----------------------------YDEQ---DNY---VVIKHAALFTST 175 (356)
Q Consensus 144 ------------~--~~~~~l~~~G~~----------------------------~~~~---~~~---~~~~~~~~~~~~ 175 (356)
. ....+....+.. +... ..+ ....+...+...
T Consensus 96 l~~~~~~~~p~~~~~~~~~~~~~~g~~~~d~l~~~~~~~~~~~l~~~~~~~~~P~l~~~~~~gg~~~~dg~vd~~~l~~~ 175 (561)
T 3da1_A 96 VTTPEWMLLPIFKDGTFGKFSTSLGLKVYDYLADVRKDERRYMLNEKQTLEKEPLLRKENLKGGGIYVEYRTDDARLTLE 175 (561)
T ss_dssp TCEEEEEEEEECC---------------------------CEEECHHHHHHHCTTSCCTTCCEEEEEEEEECCHHHHHHH
T ss_pred hccccceeEeecCCccHHHHHHHhHHHHHHHhhcccCCCCcEEECHHHHHHhCccCChhhceeEEEecCceEcHHHHHHH
Confidence 0 000000000000 0000 000 112345677777
Q ss_pred HHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 176 IMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 176 l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
|.+.+. +.|++++++++|+++..+++++.+|.+.+ .. +++..+++||.||+|+|.++
T Consensus 176 L~~~a~-~~G~~i~~~~~V~~l~~~~g~v~gV~~~d------~~---tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 176 IMKEAV-ARGAVALNYMKVESFIYDQGKVVGVVAKD------RL---TDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHH-HTTCEEEESEEEEEEEEETTEEEEEEEEE------TT---TCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHH-HcCCEEEcCCEEEEEEEcCCeEEEEEEEE------cC---CCceEEEECCEEEECCCcch
Confidence 777776 57999999999999999999998888753 11 12346899999999999765
No 35
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.38 E-value=6.7e-12 Score=124.88 Aligned_cols=135 Identities=24% Similarity=0.247 Sum_probs=91.7
Q ss_pred CCcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCC-----------
Q 018414 88 YADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGID----------- 156 (356)
Q Consensus 88 ~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~----------- 156 (356)
..++||+|||||++|+++|+.|+++ |++|+||||...++.... + ........+.|+++|+.
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~-G~~v~vlE~~~~~~~~~r--~-----~~l~~~~~~~l~~lGl~~~~~~~~~~~~ 81 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLG-GVDVMVLEQLPQRTGESR--G-----LGFTARTMEVFDQRGILPAFGPVETSTQ 81 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCSSCCCCCC--S-----EEECHHHHHHHHHTTCGGGGCSCCEESE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCCCCCCCc--e-----eEECHHHHHHHHHCCCHHHHHhcccccc
Confidence 3469999999999999999999999 999999999876542111 0 11122334445554432
Q ss_pred -------ccc--c---CCeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCC
Q 018414 157 -------YDE--Q---DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCM 224 (356)
Q Consensus 157 -------~~~--~---~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g 224 (356)
++. . ..+....+...+.+.|.+.+. +.|++++++++|+++..+++.+. +.+.+ . .+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~-~~gv~v~~~~~v~~i~~~~~~v~-v~~~~-------~---~g 149 (499)
T 2qa2_A 82 GHFGGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWAL-GRGAELLRGHTVRALTDEGDHVV-VEVEG-------P---DG 149 (499)
T ss_dssp EEETTEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHH-HTTCEEEESCEEEEEEECSSCEE-EEEEC-------S---SC
T ss_pred ceecceecccccCCCCCCceEecCHHHHHHHHHHHHH-hCCCEEEcCCEEEEEEEeCCEEE-EEEEc-------C---CC
Confidence 100 0 112234456777788888876 46999999999999998877665 44331 0 01
Q ss_pred CCeEEEcCEEEEcCCCCCC
Q 018414 225 DPNVMEAKVVVSSCGHDGP 243 (356)
Q Consensus 225 ~~~~i~Ak~VI~AtGg~~~ 243 (356)
..+++||+||.|+|.++.
T Consensus 150 -~~~~~a~~vVgADG~~S~ 167 (499)
T 2qa2_A 150 -PRSLTTRYVVGCDGGRST 167 (499)
T ss_dssp -EEEEEEEEEEECCCTTCH
T ss_pred -cEEEEeCEEEEccCcccH
Confidence 257999999999997763
No 36
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.37 E-value=5e-12 Score=122.09 Aligned_cols=131 Identities=15% Similarity=0.123 Sum_probs=86.1
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCC---------Cccc
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGI---------DYDE 159 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~---------~~~~ 159 (356)
.+|||+|||||++|+++|+.|+++ |++|+|+||...+..... + ........+.|+++|+ +...
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~-G~~V~v~E~~~~~~~~~~--~-----~~l~~~~~~~l~~lg~~~~~~~~~~~~~~ 93 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQS-GIDCDVYEAVKEIKPVGA--A-----ISVWPNGVKCMAHLGMGDIMETFGGPLRR 93 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSCC----C--E-----EEECHHHHHHHHHTTCHHHHHHHSCCCCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCCCCCcCe--e-----EEECHHHHHHHHHCCCHHHHHhhcCCCcc
Confidence 469999999999999999999999 999999999876532110 0 0111122233333332 1110
Q ss_pred ------c-C----------------CeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeec
Q 018414 160 ------Q-D----------------NYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSM 216 (356)
Q Consensus 160 ------~-~----------------~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~ 216 (356)
. + ......+...+.+.|++.+. + ++++++++|+++..+++.+. +.+.+
T Consensus 94 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~-~--~~i~~~~~v~~i~~~~~~v~-v~~~~----- 164 (407)
T 3rp8_A 94 MAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWG-R--DSVQFGKRVTRCEEDADGVT-VWFTD----- 164 (407)
T ss_dssp EEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHC-G--GGEEESCCEEEEEEETTEEE-EEETT-----
T ss_pred eEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCC-c--CEEEECCEEEEEEecCCcEE-EEEcC-----
Confidence 0 0 11122345677778877775 3 89999999999999888654 33432
Q ss_pred ccCCCCCCCCeEEEcCEEEEcCCCCCCCC
Q 018414 217 NHDTQSCMDPNVMEAKVVVSSCGHDGPFG 245 (356)
Q Consensus 217 ~~~~~~~g~~~~i~Ak~VI~AtGg~~~~~ 245 (356)
+.+++||.||.|+|.++.+.
T Consensus 165 ---------g~~~~a~~vV~AdG~~S~vr 184 (407)
T 3rp8_A 165 ---------GSSASGDLLIAADGSHSALR 184 (407)
T ss_dssp ---------SCEEEESEEEECCCTTCSSH
T ss_pred ---------CCEEeeCEEEECCCcChHHH
Confidence 35799999999999887543
No 37
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.37 E-value=6.5e-12 Score=125.90 Aligned_cols=133 Identities=16% Similarity=0.128 Sum_probs=87.0
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhC---------CCccc
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELG---------IDYDE 159 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G---------~~~~~ 159 (356)
.++||+|||||++|+++|+.|+++ |++|+||||...++...... . ......+.++++| ..+..
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~-G~~v~viEr~~~~~~~~~~~-~------l~~~~~~~l~~lGl~~~~~~~~~~~~~ 75 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQ-GVRVLVVERRPGLSPYPRAA-G------QNPRTMELLRIGGVADEVVRADDIRGT 75 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSSSCCCCCCSC-C------BCHHHHHHHHHTTCHHHHHHSCCSSCT
T ss_pred ccCcEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCCCCCCCccc-e------ECHHHHHHHHHcCCHHHHHhhCCCccc
Confidence 358999999999999999999999 99999999987654221111 1 1111222222222 22111
Q ss_pred c----------------------------------CCeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCC---
Q 018414 160 Q----------------------------------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--- 202 (356)
Q Consensus 160 ~----------------------------------~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~--- 202 (356)
. .......+...+...|.+.+.+ .|++++++++|+++..+++
T Consensus 76 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~-~gv~i~~~~~v~~i~~~~~~~~ 154 (535)
T 3ihg_A 76 QGDFVIRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARK-HGGAIRFGTRLLSFRQHDDDAG 154 (535)
T ss_dssp TSCCEEEEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHH-TTCEEESSCEEEEEEEECGGGC
T ss_pred ccceeeeEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHh-CCCEEEeCCEEEEEEECCCCcc
Confidence 0 0001122446677788888774 5999999999999998876
Q ss_pred -eEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 203 -RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 203 -~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
.+...... .+ ...+++||+||.|+|.++
T Consensus 155 ~~v~v~~~~-------~~-----~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 155 AGVTARLAG-------PD-----GEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp SEEEEEEEE-------TT-----EEEEEEEEEEEECCCTTC
T ss_pred ccEEEEEEc-------CC-----CeEEEEeCEEEECCCCcc
Confidence 55533221 00 136799999999999876
No 38
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.36 E-value=4e-12 Score=122.18 Aligned_cols=136 Identities=21% Similarity=0.220 Sum_probs=88.7
Q ss_pred cccEEEECCCHHHHHHHHHhhc-CCC-CeEEEEeccCCCCCcccc-CCccchhh--------hc----------------
Q 018414 90 DTDVVVVGAGSAGLSCAYELSK-NPN-IQIAIIEQSVSPGGGAWL-GGQLFSAM--------VV---------------- 142 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~-~~G-~~V~llEk~~~~Gg~~~~-~g~~~~~~--------~~---------------- 142 (356)
++||+|||||++|+++|++|++ + | .+|+||||....++.++. .|.+.... ..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~-G~~~V~vlE~~~~~~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 99 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNH-GITNVAVLEKGWLAGGNMARNTTIIRSNYLWDESAGIYEKSLKLWEQLPEDLEYD 99 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHH-CCCCEEEECSSSTTCSGGGTSCCCBCCCCSSHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCEEEECcCHHHHHHHHHHHHhc-CCCcEEEEeCCCCCCCcccccCceeeecCCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5899999999999999999999 9 9 999999999744433322 22111000 00
Q ss_pred ------------c-c-------hHHHHHHHhCCCcccc---------C----------Ce--EE------EechHHHHHH
Q 018414 143 ------------R-K-------PAHIFLDELGIDYDEQ---------D----------NY--VV------IKHAALFTST 175 (356)
Q Consensus 143 ------------~-~-------~~~~~l~~~G~~~~~~---------~----------~~--~~------~~~~~~~~~~ 175 (356)
. . ...+++.++|+++... . .+ .. ..+...+.+.
T Consensus 100 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (405)
T 2gag_B 100 FLFSQRGVLNLAHTLGDVRESVRRVEANKLNGVDAEWLDPSQVKEACPIINTSDDIRYPVMGATWQPRAGIAKHDHVAWA 179 (405)
T ss_dssp CCCBCCCEEEEECSHHHHHHHHHHHHHHHTBTCCCEEECHHHHHHHCTTSCCSTTSSSCCCEEEEETTCBBCCHHHHHHH
T ss_pred cCEecccEEEEEcCHHHHHHHHHHHHHHHhcCCCceEeCHHHHHhhCCCCcccccccccceeEEEeCCCccCCHHHHHHH
Confidence 0 0 0112222334332110 0 00 00 1134567778
Q ss_pred HHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 176 IMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 176 l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
|.+.+. +.|++++++++|+++..+++++.++.+.+ .+++||.||+|+|+++
T Consensus 180 l~~~~~-~~g~~i~~~~~v~~i~~~~~~~~~v~~~~---------------g~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 180 FARKAN-EMGVDIIQNCEVTGFIKDGEKVTGVKTTR---------------GTIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHH-HTTCEEECSCCEEEEEESSSBEEEEEETT---------------CCEEEEEEEECCGGGH
T ss_pred HHHHHH-HCCCEEEcCCeEEEEEEeCCEEEEEEeCC---------------ceEECCEEEECCchhH
Confidence 888776 57999999999999998888877777642 2689999999999765
No 39
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.36 E-value=7.6e-12 Score=119.77 Aligned_cols=127 Identities=19% Similarity=0.147 Sum_probs=86.3
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCC---------cc--
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGID---------YD-- 158 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~---------~~-- 158 (356)
.+||+|||||++|+++|+.|+++ |++|+|+||...++.... +. .......+.++++|+. ..
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~-G~~v~viE~~~~~~~~~~--~~-----~l~~~~~~~l~~~g~~~~~~~~~~~~~~~ 82 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQN-GWDVRLHEKSSELRAFGA--GI-----YLWHNGLRVLEGLGALDDVLQGSHTPPTY 82 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSCCCCSS--EE-----EEEHHHHHHHHHTTCHHHHHTTCBCCSCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCCEEEEecCCCCCCCCc--eE-----EeCccHHHHHHHcCCHHHHHhhCCCccce
Confidence 58999999999999999999999 999999999876653211 11 1111223334444331 10
Q ss_pred ---cc----------CCeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCC
Q 018414 159 ---EQ----------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMD 225 (356)
Q Consensus 159 ---~~----------~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~ 225 (356)
.. .......+...+.+.|.+.+. +.|++++++++|+++.. ++ .+.+.+
T Consensus 83 ~~~~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~gv~i~~~~~v~~i~~-~~---~v~~~~-------------- 143 (379)
T 3alj_A 83 ETWMHNKSVSKETFNGLPWRIMTRSHLHDALVNRAR-ALGVDISVNSEAVAADP-VG---RLTLQT-------------- 143 (379)
T ss_dssp EEEETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHH-HTTCEEESSCCEEEEET-TT---EEEETT--------------
T ss_pred EEEeCCceeeeccCCCCceEEECHHHHHHHHHHHHH-hcCCEEEeCCEEEEEEe-CC---EEEECC--------------
Confidence 00 001223455778888888887 46999999999999976 44 344432
Q ss_pred CeEEEcCEEEEcCCCCCC
Q 018414 226 PNVMEAKVVVSSCGHDGP 243 (356)
Q Consensus 226 ~~~i~Ak~VI~AtGg~~~ 243 (356)
+.++++|.||+|+|..+.
T Consensus 144 g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 144 GEVLEADLIVGADGVGSK 161 (379)
T ss_dssp SCEEECSEEEECCCTTCH
T ss_pred CCEEEcCEEEECCCccHH
Confidence 357999999999998764
No 40
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.35 E-value=4.4e-12 Score=128.61 Aligned_cols=133 Identities=17% Similarity=0.248 Sum_probs=90.1
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCC---------Cccc
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGI---------DYDE 159 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~---------~~~~ 159 (356)
.++||+|||||++|+++|+.|+++ |++|+|||+...++... +..+.. .....++.+|+ ....
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~-G~~V~LiEr~~~~~~~~--G~~l~p------~~~~~l~~lGl~~~l~~~~~~~~~ 92 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKL-GHDVTIYERSAFPRYRV--GESLLP------GTMSILNRLGLQEKIDAQNYVKKP 92 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCSSCCCC--CCBCCH------HHHHHHHHTTCHHHHHHHCCEEEC
T ss_pred CCCCEEEECcCHHHHHHHHHHHcC-CCCEEEEcCCCCCCCce--eeeECH------HHHHHHHHcCCcHHHHhcCCcccC
Confidence 369999999999999999999999 99999999986544321 111111 11222222222 1100
Q ss_pred --------c-----------------CCeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceee
Q 018414 160 --------Q-----------------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALV 214 (356)
Q Consensus 160 --------~-----------------~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~ 214 (356)
. ..+....+...+...|.+.+. +.|++++++++|+++..+++.+.+|.+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~-~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~--- 168 (591)
T 3i3l_A 93 SATFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEAR-SRGITVHEETPVTDVDLSDPDRVVLTVRR--- 168 (591)
T ss_dssp EEEEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHH-HTTCEEETTCCEEEEECCSTTCEEEEEEE---
T ss_pred CcEEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHH-hCCCEEEeCCEEEEEEEcCCCEEEEEEec---
Confidence 0 011223456778888888876 57999999999999988766666676641
Q ss_pred ecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 215 SMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 215 ~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
+|+..+++||.||+|+|..+
T Consensus 169 --------~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 169 --------GGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp --------TTEEEEEEESEEEECCGGGC
T ss_pred --------CCceEEEEcCEEEECCCCcc
Confidence 11236799999999999765
No 41
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.35 E-value=1.2e-11 Score=125.05 Aligned_cols=137 Identities=23% Similarity=0.271 Sum_probs=89.9
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC-CCCCccccC--Cccchhhhcc------chHHHHHHHhCCCcccc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV-SPGGGAWLG--GQLFSAMVVR------KPAHIFLDELGIDYDEQ 160 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~-~~Gg~~~~~--g~~~~~~~~~------~~~~~~l~~~G~~~~~~ 160 (356)
+|||+|||||++|+.||+.|++. |.+|+|||+.. .+|...++. +.+....+.. .....+++..++.|...
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~-G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l 105 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARM-GAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKML 105 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeec
Confidence 59999999999999999999999 99999999974 344321110 1110000000 01112233344444321
Q ss_pred C--------CeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcC
Q 018414 161 D--------NYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAK 232 (356)
Q Consensus 161 ~--------~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak 232 (356)
. ......+...+...|.+.+.+..|++++ +++|+++..+++++.+|.+.+ +.+++||
T Consensus 106 ~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~d--------------G~~i~Ad 170 (637)
T 2zxi_A 106 NTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNL--------------GVEYKTK 170 (637)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETT--------------SCEEECS
T ss_pred ccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECC--------------CcEEEeC
Confidence 0 0111234566777777777644799995 569999999889998888753 3679999
Q ss_pred EEEEcCCCCC
Q 018414 233 VVVSSCGHDG 242 (356)
Q Consensus 233 ~VI~AtGg~~ 242 (356)
.||+|||++.
T Consensus 171 aVVLATG~~s 180 (637)
T 2zxi_A 171 AVVVTTGTFL 180 (637)
T ss_dssp EEEECCTTCB
T ss_pred EEEEccCCCc
Confidence 9999999864
No 42
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.34 E-value=5.6e-12 Score=127.84 Aligned_cols=145 Identities=23% Similarity=0.279 Sum_probs=93.1
Q ss_pred cccEEEECCCHHHHHHHHHhhcC-----CCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccc-----
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKN-----PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDE----- 159 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~-----~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~----- 159 (356)
+|||+|||||++|+++|+.|++. +|++|+||||...+|+....++.+....+.. ....+.+.+.++..
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~--ll~~~~~~g~~~~~~~~~~ 112 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEE--LFPDWKEKGAPLNTPVTED 112 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHH--HCTTHHHHTCCCCEECCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHH--HHHHHHhcCCceeeeechh
Confidence 58999999999999999999985 2799999999987776544333322111000 00001112221110
Q ss_pred ---------------------cCCeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeC-CeEEEEEEcceeeecc
Q 018414 160 ---------------------QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSMN 217 (356)
Q Consensus 160 ---------------------~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~-~~v~gv~~~~~~~~~~ 217 (356)
........+...+.+.|.+.+. +.|++|+++++|+++..++ +++.+|.+.+..+..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~-~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~- 190 (584)
T 2gmh_A 113 RFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAE-ALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQK- 190 (584)
T ss_dssp EEEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHH-HTTCEEETTCCEEEEEECTTSSEEEEEECCEEECT-
T ss_pred heeeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHH-HcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccC-
Confidence 0000123345678888888886 4599999999999999875 578888764210000
Q ss_pred cCCCCCCC-------CeEEEcCEEEEcCCCCCC
Q 018414 218 HDTQSCMD-------PNVMEAKVVVSSCGHDGP 243 (356)
Q Consensus 218 ~~~~~~g~-------~~~i~Ak~VI~AtGg~~~ 243 (356)
+|+ ..+++||+||+|+|+++.
T Consensus 191 -----~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 191 -----DGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp -----TSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred -----CCCcccccCCceEEECCEEEEeeCCCch
Confidence 111 257999999999998874
No 43
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.34 E-value=3.4e-12 Score=122.60 Aligned_cols=136 Identities=20% Similarity=0.164 Sum_probs=86.3
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCC-ccccCCccchhhhccchHHHHHHHhCCCc---------c-
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGG-GAWLGGQLFSAMVVRKPAHIFLDELGIDY---------D- 158 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg-~~~~~g~~~~~~~~~~~~~~~l~~~G~~~---------~- 158 (356)
++||+|||||++|+++|+.|++. |++|+|+||...+.+ .....+. ......+.|+++|+.- .
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~-G~~v~v~E~~~~~~~~~~~~~g~------l~~~~~~~l~~lg~~~~~~~~~~~~~~ 74 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKA-GIDNVILERQTPDYVLGRIRAGV------LEQGMVDLLREAGVDRRMARDGLVHEG 74 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHH-TCCEEEECSSCHHHHHTCCCCCE------ECHHHHHHHHHTTCCHHHHHHCEEESC
T ss_pred CccEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCCcccCCCceEe------ECHHHHHHHHHcCCcHHHHhcCCccce
Confidence 48999999999999999999999 999999999863210 0000111 1122334444444321 0
Q ss_pred ----cc-------------CCeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEE-cceeeecccCC
Q 018414 159 ----EQ-------------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVT-NWALVSMNHDT 220 (356)
Q Consensus 159 ----~~-------------~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~-~~~~~~~~~~~ 220 (356)
.. .......+...+.+.|++.+. +.|++++++++|+++..+++....+.+ .+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~--------- 144 (394)
T 1k0i_A 75 VEIAFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEARE-ACGATTVYQAAEVRLHDLQGERPYVTFERD--------- 144 (394)
T ss_dssp EEEEETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHH-HTTCEEESSCEEEEEECTTSSSCEEEEEET---------
T ss_pred EEEEECCceEEeccccccCCCceEEechHHHHHHHHHHHH-hcCCeEEeceeEEEEEEecCCceEEEEecC---------
Confidence 00 111122234567777888776 459999999999999876432223433 21
Q ss_pred CCCCCCeEEEcCEEEEcCCCCCCCC
Q 018414 221 QSCMDPNVMEAKVVVSSCGHDGPFG 245 (356)
Q Consensus 221 ~~~g~~~~i~Ak~VI~AtGg~~~~~ 245 (356)
|+..+++||.||.|+|.++.+.
T Consensus 145 ---g~~~~~~a~~vV~AdG~~S~vr 166 (394)
T 1k0i_A 145 ---GERLRLDCDYIAGCDGFHGISR 166 (394)
T ss_dssp ---TEEEEEECSEEEECCCTTCSTG
T ss_pred ---CcEEEEEeCEEEECCCCCcHHH
Confidence 1123799999999999887643
No 44
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.34 E-value=7.1e-12 Score=119.58 Aligned_cols=136 Identities=18% Similarity=0.177 Sum_probs=86.3
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhc-c--c-------hH-------HHHH-
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVV-R--K-------PA-------HIFL- 150 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~-~--~-------~~-------~~~l- 150 (356)
.++||+|||||++|+++|+.|+++ |++|+|||+....++.++..+.+...... . . .. .+.+
T Consensus 16 ~~~dvvIIGgG~~Gl~~A~~La~~-G~~V~llE~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 94 (382)
T 1ryi_A 16 RHYEAVVIGGGIIGSAIAYYLAKE-NKNTALFESGTMGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYKGLGEELY 94 (382)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSTTTTHHHHCCCBCCGGGSCSSCSHHHHHHHHHHHHTTTHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCCCCcccchhcCceeccCccCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999999999 99999999986554433322221111100 0 0 00 0001
Q ss_pred HHhCCCcc--cc----------------------------------------CC----eE----EEechHHHHHHHHHHH
Q 018414 151 DELGIDYD--EQ----------------------------------------DN----YV----VIKHAALFTSTIMSKL 180 (356)
Q Consensus 151 ~~~G~~~~--~~----------------------------------------~~----~~----~~~~~~~~~~~l~~~~ 180 (356)
...++.+. .. .. +. ...+...+.+.|.+.+
T Consensus 95 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 174 (382)
T 1ryi_A 95 ALSGVDIRQHNGGMFKLAFSEEDVLQLRQMDDLDSVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPYFVCKAYVKAA 174 (382)
T ss_dssp HHHCCCCCCBCCCEEEEESSHHHHHHHHTTTTSTTEEEEEHHHHHHHCTTSCTTCCEEEEETTCCBCCHHHHHHHHHHHH
T ss_pred HhhCCCcCeeecceEEEEeCHHHHHHHHHHhhcCCeEEECHHHHHHhCCCCCcccceEEEeCCCeEEcHHHHHHHHHHHH
Confidence 01122110 00 00 00 0123466778888887
Q ss_pred HcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 181 LARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 181 ~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
. +.|++++++++|+++..+++++ ++.+. ..+++||.||+|+|.++
T Consensus 175 ~-~~g~~i~~~~~v~~i~~~~~~~-~v~~~---------------~g~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 175 K-MLGAEIFEHTPVLHVERDGEAL-FIKTP---------------SGDVWANHVVVASGVWS 219 (382)
T ss_dssp H-HTTCEEETTCCCCEEECSSSSE-EEEET---------------TEEEEEEEEEECCGGGT
T ss_pred H-HCCCEEEcCCcEEEEEEECCEE-EEEcC---------------CceEEcCEEEECCChhH
Confidence 6 5699999999999998877766 55553 13799999999999764
No 45
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.33 E-value=1.4e-11 Score=125.01 Aligned_cols=138 Identities=25% Similarity=0.347 Sum_probs=89.3
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC-CCCCccccC--Cccchhhhcc------chHHHHHHHhCCCccc
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV-SPGGGAWLG--GQLFSAMVVR------KPAHIFLDELGIDYDE 159 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~-~~Gg~~~~~--g~~~~~~~~~------~~~~~~l~~~G~~~~~ 159 (356)
.+|||||||||++|++||+.|++. |.+|+|||+.. .+|...++. +.+....+.. .....+.+..++.|..
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~-G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~ 105 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARM-GQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRI 105 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhC-CCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhh
Confidence 359999999999999999999999 99999999974 344221110 1110000000 0111223333444432
Q ss_pred cC--------CeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEc
Q 018414 160 QD--------NYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEA 231 (356)
Q Consensus 160 ~~--------~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A 231 (356)
.. ......+...+...|.+.+.+..|++++ +++|+++..+++++.+|.+.+ +.+++|
T Consensus 106 l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~d--------------G~~I~A 170 (651)
T 3ces_A 106 LNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQM--------------GLKFRA 170 (651)
T ss_dssp ESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEETT--------------SEEEEE
T ss_pred hhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEECC--------------CCEEEC
Confidence 10 0111234456777777777644799995 569999998888888888752 367999
Q ss_pred CEEEEcCCCCC
Q 018414 232 KVVVSSCGHDG 242 (356)
Q Consensus 232 k~VI~AtGg~~ 242 (356)
|.||+|||+++
T Consensus 171 d~VVLATGt~s 181 (651)
T 3ces_A 171 KAVVLTVGTFL 181 (651)
T ss_dssp EEEEECCSTTT
T ss_pred CEEEEcCCCCc
Confidence 99999999875
No 46
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.32 E-value=5.2e-12 Score=127.68 Aligned_cols=132 Identities=22% Similarity=0.232 Sum_probs=85.9
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCC-------------
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGI------------- 155 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~------------- 155 (356)
++|||+|||||++|+++|+.|+++ |++|+||||...+..... +.. ......+.|+++|+
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~-G~~V~VlEr~~~~~~~~r-~~~------l~~~s~~~l~~lGl~~~l~~~~~~~~~ 119 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAG-GVGALVLEKLVEPVGHDR-AGA------LHIRTVETLDLRGLLDRFLEGTQVAKG 119 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHT-TCCEEEEBSCSSCCCSSS-CCC------BCHHHHHHHHTTTCHHHHTTSCCBCSB
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEcCCCCCCCCce-EEE------ECHHHHHHHHHcCChHHHHhcCcccCC
Confidence 469999999999999999999999 999999999876542111 111 11122223332222
Q ss_pred -----------Ccccc---CCeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCC
Q 018414 156 -----------DYDEQ---DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQ 221 (356)
Q Consensus 156 -----------~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~ 221 (356)
.+... ..+....+...+.+.|.+.+. +.|++|+++++|+++..+++.+. +.+.. .
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~-~~gv~i~~~~~v~~l~~~~~~v~-v~~~~-------~-- 188 (570)
T 3fmw_A 120 LPFAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAR-EAGAEIPRGHEVTRLRQDAEAVE-VTVAG-------P-- 188 (570)
T ss_dssp CCBTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHH-HHTEECCBSCEEEECCBCSSCEE-EEEEE-------T--
T ss_pred ceeCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHH-hCCCEEEeCCEEEEEEEcCCeEE-EEEEe-------C--
Confidence 11110 112223456777788888776 46999999999999988877655 33310 0
Q ss_pred CCCCC-eEEEcCEEEEcCCCCC
Q 018414 222 SCMDP-NVMEAKVVVSSCGHDG 242 (356)
Q Consensus 222 ~~g~~-~~i~Ak~VI~AtGg~~ 242 (356)
++ .+++||+||.|+|.++
T Consensus 189 ---~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 189 ---SGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp ---TEEEEEEESEEEECSCSSC
T ss_pred ---CCcEEEEeCEEEEcCCCCc
Confidence 13 5799999999999775
No 47
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.32 E-value=1.6e-11 Score=126.85 Aligned_cols=137 Identities=13% Similarity=0.123 Sum_probs=87.5
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCC-cccc-CCccchhhhcc------------chHHHHHH----
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGG-GAWL-GGQLFSAMVVR------------KPAHIFLD---- 151 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg-~~~~-~g~~~~~~~~~------------~~~~~~l~---- 151 (356)
++||+|||||++|+++|+.|+++ |++|+||||...+|+ .++. +|.+....... ....+.+.
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~-G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~ 342 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRR-GAVVTLYCADAQPAQGASGNRQGALYPLLNGKNDALETFFTSAFTFARRQYDQLLE 342 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTT-TCCEEEEESSSSTTCSGGGCSCEEECCCCCSSCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-CCcEEEEeCCCccccccccccCCEEecCCCCCChHHHHHHHHHHHHHHHHHHHhhh
Confidence 58999999999999999999999 999999999866653 2222 22211100000 00111111
Q ss_pred -----------------------------HhCCCcc---c--------------c-CCeE----EEechHHHHHHHHHHH
Q 018414 152 -----------------------------ELGIDYD---E--------------Q-DNYV----VIKHAALFTSTIMSKL 180 (356)
Q Consensus 152 -----------------------------~~G~~~~---~--------------~-~~~~----~~~~~~~~~~~l~~~~ 180 (356)
+.|++.. . . ..+. ...+...+...|.+.+
T Consensus 343 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~~a 422 (689)
T 3pvc_A 343 QGIAFDHQWCGVSQLAFDDKSRGKIEKMLHTQWPVEFAEAMSREQLSELAGLDCAHDGIHYPAGGWLCPSDLTHALMMLA 422 (689)
T ss_dssp TTCCCCEECCCEEEECCSHHHHHHHHHHTTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHHHH
T ss_pred hccccccccCceEEeccCHHHHHHHHHHHhcCCChHHhhccCHHHHHHhcCCCcccceEEecCCeEECHHHHHHHHHHHH
Confidence 1222211 0 0 0000 1224567788888887
Q ss_pred HcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCe-EEEcCEEEEcCCCCCC
Q 018414 181 LARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPN-VMEAKVVVSSCGHDGP 243 (356)
Q Consensus 181 ~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~-~i~Ak~VI~AtGg~~~ 243 (356)
. +.|++++++++|++|..+++++ .|.+.+ +. +++||.||+|+|+++.
T Consensus 423 ~-~~Gv~i~~~t~V~~l~~~~~~v-~V~t~~--------------G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 423 Q-QNGMTCHYQHELQRLKRIDSQW-QLTFGQ--------------SQAAKHHATVILATGHRLP 470 (689)
T ss_dssp H-HTTCEEEESCCEEEEEECSSSE-EEEEC---------------CCCCEEESEEEECCGGGTT
T ss_pred H-hCCCEEEeCCeEeEEEEeCCeE-EEEeCC--------------CcEEEECCEEEECCCcchh
Confidence 6 5699999999999999987764 454431 23 6999999999998764
No 48
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.32 E-value=5.8e-12 Score=121.11 Aligned_cols=135 Identities=21% Similarity=0.314 Sum_probs=87.3
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCC--CccccCCccch--------------------h--------
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPG--GGAWLGGQLFS--------------------A-------- 139 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~G--g~~~~~g~~~~--------------------~-------- 139 (356)
++||+|||||++|+++|+.|+++ |++|+||||....+ +.++....++. .
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~-G~~V~vlE~~~~~~~~gas~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAER-GHRVLVLERHTFFNENGGTSGAERHWRLQYTQEDLFRLTLETLPLWRALESRCERR 82 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCTTCSSSSCCSSEEEECSCCSSHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCCCCCCCCCCcCeEEEeccCcchhhhHHHHHHHHHHHHHHHhCcc
Confidence 48999999999999999999999 99999999987554 32221111000 0
Q ss_pred hh--------cc-------c---hHHHHHHHhCCCcccc---------C------Ce-E------EEechHHHHHHHHHH
Q 018414 140 MV--------VR-------K---PAHIFLDELGIDYDEQ---------D------NY-V------VIKHAALFTSTIMSK 179 (356)
Q Consensus 140 ~~--------~~-------~---~~~~~l~~~G~~~~~~---------~------~~-~------~~~~~~~~~~~l~~~ 179 (356)
.+ .. . ...+++.++|+++... . .. . ...+...+...|.+.
T Consensus 83 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 162 (397)
T 2oln_A 83 LIHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDVRGTLAALFTL 162 (397)
T ss_dssp CEECCCEEEEECSSCCBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCCCSCCTTCEEEEETTCEEEEHHHHHHHHHHH
T ss_pred HHHHCCcEEEcCCCccchhHHHHHHHHHHHHcCCCceecCHHHHHhhCcCccCCCceeEEEcCCCCEEcHHHHHHHHHHH
Confidence 00 00 0 1123444455543110 0 00 0 022346677788887
Q ss_pred HHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 180 LLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 180 ~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
+. +.|++++++++|++|..+++.+. +.+. ..+++||.||+|+|+++
T Consensus 163 a~-~~Gv~i~~~~~V~~i~~~~~~v~-v~t~---------------~g~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 163 AQ-AAGATLRAGETVTELVPDADGVS-VTTD---------------RGTYRAGKVVLACGPYT 208 (397)
T ss_dssp HH-HTTCEEEESCCEEEEEEETTEEE-EEES---------------SCEEEEEEEEECCGGGH
T ss_pred HH-HcCCEEECCCEEEEEEEcCCeEE-EEEC---------------CCEEEcCEEEEcCCcCh
Confidence 76 56999999999999998877654 4332 24699999999999663
No 49
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.31 E-value=3.3e-11 Score=116.08 Aligned_cols=129 Identities=19% Similarity=0.242 Sum_probs=86.1
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCcc-----------
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYD----------- 158 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~----------- 158 (356)
.+||+|||||++|+++|+.|+++ |++|+|+||...+... . +.. ........+.|+++|+...
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~-G~~v~v~E~~~~~~~~-~-~~g----~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~ 77 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDA-GVDVDVYERSPQPLSG-F-GTG----IVVQPELVHYLLEQGVELDSISVPSSSMEY 77 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCCC-C-SCE----EECCHHHHHHHHHTTCCGGGTCBCCCEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhC-CCCEEEEecCCCCCCc-c-ccc----cccChhHHHHHHHcCCccccccccccceEE
Confidence 58999999999999999999999 9999999998653111 0 111 1112334566777765320
Q ss_pred --c-cCCeEE-------EechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeE
Q 018414 159 --E-QDNYVV-------IKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNV 228 (356)
Q Consensus 159 --~-~~~~~~-------~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~ 228 (356)
. .+.... ..+...+.+.|.+.+ .+++++++++|+++..+++.+. +.+.+ +.+
T Consensus 78 ~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v~-v~~~~--------------g~~ 139 (397)
T 2vou_A 78 VDALTGERVGSVPADWRFTSYDSIYGGLYELF---GPERYHTSKCLVGLSQDSETVQ-MRFSD--------------GTK 139 (397)
T ss_dssp EETTTCCEEEEEECCCCEEEHHHHHHHHHHHH---CSTTEETTCCEEEEEECSSCEE-EEETT--------------SCE
T ss_pred EecCCCCccccccCcccccCHHHHHHHHHHhC---CCcEEEcCCEEEEEEecCCEEE-EEECC--------------CCE
Confidence 0 111000 122345556665554 4899999999999998877654 44431 357
Q ss_pred EEcCEEEEcCCCCCC
Q 018414 229 MEAKVVVSSCGHDGP 243 (356)
Q Consensus 229 i~Ak~VI~AtGg~~~ 243 (356)
+++|.||+|+|.++.
T Consensus 140 ~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 140 AEANWVIGADGGASV 154 (397)
T ss_dssp EEESEEEECCCTTCH
T ss_pred EECCEEEECCCcchh
Confidence 999999999997764
No 50
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.31 E-value=2e-11 Score=123.75 Aligned_cols=138 Identities=17% Similarity=0.249 Sum_probs=91.3
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC-CCCCccccC--Ccc-----chhhhc-cchHHHHHHHhCCCccc
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV-SPGGGAWLG--GQL-----FSAMVV-RKPAHIFLDELGIDYDE 159 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~-~~Gg~~~~~--g~~-----~~~~~~-~~~~~~~l~~~G~~~~~ 159 (356)
.+|||+|||||++|+.||+.|++. |.+|+|||+.. .+|+..++. +.+ ...+.. ......+++..++.|..
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~-G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~ 98 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARG-GLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRM 98 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHC-CCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhh
Confidence 359999999999999999999999 99999999974 344322111 111 000000 00112334444555432
Q ss_pred c-----CC---eEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEc
Q 018414 160 Q-----DN---YVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEA 231 (356)
Q Consensus 160 ~-----~~---~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A 231 (356)
. .. .....+...+...+.+.+.+..|++++.+ .|+++..+++++.+|.+.+ +.+++|
T Consensus 99 l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~-~V~~L~~d~g~V~GV~t~~--------------G~~i~A 163 (641)
T 3cp8_A 99 LNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQD-TVIGVSANSGKFSSVTVRS--------------GRAIQA 163 (641)
T ss_dssp ECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEEC-CEEEEEEETTEEEEEEETT--------------SCEEEE
T ss_pred cccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEee-EEEEEEecCCEEEEEEECC--------------CcEEEe
Confidence 1 11 11233456777777777764469999655 8999998889998887752 357999
Q ss_pred CEEEEcCCCCC
Q 018414 232 KVVVSSCGHDG 242 (356)
Q Consensus 232 k~VI~AtGg~~ 242 (356)
|.||+|||++.
T Consensus 164 d~VVLATG~~s 174 (641)
T 3cp8_A 164 KAAILACGTFL 174 (641)
T ss_dssp EEEEECCTTCB
T ss_pred CEEEECcCCCC
Confidence 99999999874
No 51
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.30 E-value=2.3e-11 Score=117.23 Aligned_cols=137 Identities=15% Similarity=0.169 Sum_probs=84.2
Q ss_pred ccCCcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCC---------C
Q 018414 86 ITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGI---------D 156 (356)
Q Consensus 86 ~~~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~---------~ 156 (356)
..+.++||+|||||++|+++|+.|++. |++|+|+||...++... .++.+.. ......+.|+++|+ +
T Consensus 22 ~~~~~~dV~IVGaG~aGl~~A~~L~~~-G~~v~v~E~~~~~~~~~-~g~~~~~---~~~~~~~~l~~~gl~~~~~~~~~~ 96 (398)
T 2xdo_A 22 NLLSDKNVAIIGGGPVGLTMAKLLQQN-GIDVSVYERDNDREARI-FGGTLDL---HKGSGQEAMKKAGLLQTYYDLALP 96 (398)
T ss_dssp -CCTTCEEEEECCSHHHHHHHHHHHTT-TCEEEEEECSSSTTCCC-CSCCEEC---CTTTHHHHHHHTTCHHHHHHHCBC
T ss_pred cccCCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCccccc-cCCeeee---CCccHHHHHHhcChHHHHHHhhcc
Confidence 334468999999999999999999999 99999999987553221 1111100 00011222333332 1
Q ss_pred cc----ccCC--------------eEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeeccc
Q 018414 157 YD----EQDN--------------YVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNH 218 (356)
Q Consensus 157 ~~----~~~~--------------~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~ 218 (356)
.. .... .....+...+.+.|.+.+. +++++++++|+++..+++.+. +.+.+
T Consensus 97 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~i~~~~~~v~-v~~~~------- 165 (398)
T 2xdo_A 97 MGVNIADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLE---NDTVIWDRKLVMLEPGKKKWT-LTFEN------- 165 (398)
T ss_dssp CCEEEECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSC---TTSEEESCCEEEEEECSSSEE-EEETT-------
T ss_pred cceEEECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcC---CCEEEECCEEEEEEECCCEEE-EEECC-------
Confidence 00 0000 0012234566666665542 368999999999998776543 44431
Q ss_pred CCCCCCCCeEEEcCEEEEcCCCCCCCC
Q 018414 219 DTQSCMDPNVMEAKVVVSSCGHDGPFG 245 (356)
Q Consensus 219 ~~~~~g~~~~i~Ak~VI~AtGg~~~~~ 245 (356)
+.++++|.||+|+|.++...
T Consensus 166 -------g~~~~ad~vV~AdG~~S~vR 185 (398)
T 2xdo_A 166 -------KPSETADLVILANGGMSKVR 185 (398)
T ss_dssp -------SCCEEESEEEECSCTTCSCC
T ss_pred -------CcEEecCEEEECCCcchhHH
Confidence 24689999999999887644
No 52
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.29 E-value=1.5e-11 Score=114.05 Aligned_cols=113 Identities=20% Similarity=0.279 Sum_probs=71.2
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEec
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 168 (356)
++|||+||||||||++||+.|++. |++|+|+|+.. +||..+.. ++ ++.. .+. ..
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~-g~~v~lie~~~-~gg~~~~~--~~----------------~~~~--~~~----~~ 58 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRA-RKQIALFDNNT-NRNRVTQN--SH----------------GFIT--RDG----IK 58 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSC-CGGGGSSC--BC----------------CSTT--CTT----BC
T ss_pred CCcCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCC-CCCeeeee--cC----------------CccC--CCC----CC
Confidence 469999999999999999999999 99999999974 44322110 00 0000 000 12
Q ss_pred hHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
..++.....+.+.+..++.++.. .+..+...+.....+.+. +..++++|.||+|||+..
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~--------------~g~~~~a~~liiATGs~p 117 (304)
T 4fk1_A 59 PEEFKEIGLNEVMKYPSVHYYEK-TVVMITKQSTGLFEIVTK--------------DHTKYLAERVLLATGMQE 117 (304)
T ss_dssp HHHHHHHHHHHHTTSTTEEEEEC-CEEEEEECTTSCEEEEET--------------TCCEEEEEEEEECCCCEE
T ss_pred HHHHHHHHHHHHHhcCCEEEEee-EEEEeeecCCCcEEEEEC--------------CCCEEEeCEEEEccCCcc
Confidence 34555555666654555666655 555555544333334443 246799999999999754
No 53
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.29 E-value=5.6e-11 Score=115.03 Aligned_cols=39 Identities=36% Similarity=0.502 Sum_probs=36.2
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~ 130 (356)
+||+|||||++||+||++|+++ |++|+|||++..+||.+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~-G~~V~vlE~~~~~GG~~ 39 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKA-GHEVEVFERLPITGGRF 39 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHT-TCEEEEECSSSSSBTTS
T ss_pred CcEEEECCCHHHHHHHHHHHhC-CCceEEEeCCCCCCCce
Confidence 4899999999999999999999 99999999998887654
No 54
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.28 E-value=4.3e-12 Score=119.28 Aligned_cols=130 Identities=22% Similarity=0.292 Sum_probs=83.5
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
+|||+|||||++|+++|+.|+++ |++|+|+|+...+||.+.. . +......... ....-.++.+... ...+...
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~-g~~v~vie~~~~~gg~~~~-~--~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~ 75 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRS-GLSYVILDAEASPGGAWQH-A--WHSLHLFSPA-GWSSIPGWPMPAS--QGPYPAR 75 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHS-SCCEEEECCSSSSSGGGGG-S--CTTCBCSSCG-GGSCCSSSCCCCC--SSSSCBH
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCCCCCcccC-C--CCCcEecCch-hhhhCCCCCCCCC--ccCCCCH
Confidence 48999999999999999999999 9999999999877764321 1 0000000000 0000011111111 0111234
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
..+...+.+.+. +.|++++++++|+++..+++.+.++.+. ..++++|+||+|||.++
T Consensus 76 ~~~~~~l~~~~~-~~~~~~~~~~~v~~i~~~~~~~~~v~~~---------------~g~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 76 AEVLAYLAQYEQ-KYALPVLRPIRVQRVSHFGERLRVVARD---------------GRQWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHHHHHHHH-HTTCCEECSCCEEEEEEETTEEEEEETT---------------SCEEEEEEEEECCCSGG
T ss_pred HHHHHHHHHHHH-HcCCEEEcCCEEEEEEECCCcEEEEEeC---------------CCEEEeCEEEECCCCCC
Confidence 566666655554 6799999999999999888765434442 13799999999999755
No 55
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.28 E-value=3.3e-11 Score=115.12 Aligned_cols=135 Identities=18% Similarity=0.232 Sum_probs=86.8
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCC--CccccCCccch----------hhhc---------------
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPG--GGAWLGGQLFS----------AMVV--------------- 142 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~G--g~~~~~g~~~~----------~~~~--------------- 142 (356)
++||+|||||++|+++|++|+++ |++|+|||+....+ +.++....+.. .+..
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~-G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~ 81 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQ-GVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQELWYELEKETHH 81 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHHHCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHhCC
Confidence 48999999999999999999999 99999999987554 33321111100 0000
Q ss_pred ---------------cc----hHHHHHHHhCCCcccc---------C-----Ce--E------EEechHHHHHHHHHHHH
Q 018414 143 ---------------RK----PAHIFLDELGIDYDEQ---------D-----NY--V------VIKHAALFTSTIMSKLL 181 (356)
Q Consensus 143 ---------------~~----~~~~~l~~~G~~~~~~---------~-----~~--~------~~~~~~~~~~~l~~~~~ 181 (356)
.. ...+++..+|+++... + .. . ...+...+...|.+.+.
T Consensus 82 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (389)
T 2gf3_A 82 KIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRELAE 161 (389)
T ss_dssp CCEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHHHHHHHH
T ss_pred cceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHHHHHHHH
Confidence 00 0112233344432110 0 00 0 12234677888888876
Q ss_pred cCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 182 ARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 182 ~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
+.|++++++++|+++..+++.+. +.+. ..+++||.||+|+|.++
T Consensus 162 -~~Gv~i~~~~~v~~i~~~~~~~~-v~~~---------------~g~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 162 -ARGAKVLTHTRVEDFDISPDSVK-IETA---------------NGSYTADKLIVSMGAWN 205 (389)
T ss_dssp -HTTCEEECSCCEEEEEECSSCEE-EEET---------------TEEEEEEEEEECCGGGH
T ss_pred -HCCCEEEcCcEEEEEEecCCeEE-EEeC---------------CCEEEeCEEEEecCccH
Confidence 56999999999999998766543 4432 24699999999999654
No 56
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.27 E-value=1.6e-11 Score=114.11 Aligned_cols=112 Identities=19% Similarity=0.238 Sum_probs=72.4
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEec
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 168 (356)
.+|||+|||||+||++||++|++. |++|+|+||. .+||.+.+.++++... + +. ...
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~-g~~V~liE~~-~~gG~~~~~~~i~~~p-------------~--------~~-~~~ 60 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRA-NLKTVMIERG-IPGGQMANTEEVENFP-------------G--------FE-MIT 60 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS-CTTGGGGGCSCBCCST-------------T--------CS-SBC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEecC-CCCCeeecccccCCcC-------------C--------cc-ccc
Confidence 369999999999999999999999 9999999996 5788776665543210 0 00 012
Q ss_pred hHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
..++......... +.+..+..+..+.......... +.. +..++++|+||+|||+..
T Consensus 61 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~---------------~~~~~~~d~liiAtGs~~ 116 (312)
T 4gcm_A 61 GPDLSTKMFEHAK-KFGAVYQYGDIKSVEDKGEYKV--INF---------------GNKELTAKAVIIATGAEY 116 (312)
T ss_dssp HHHHHHHHHHHHH-HTTCEEEECCCCEEEECSSCEE--EEC---------------SSCEEEEEEEEECCCEEE
T ss_pred hHHHHHHHHHHHh-hccccccceeeeeeeeeeccee--ecc---------------CCeEEEeceeEEcccCcc
Confidence 3344444444443 4456666665444433332221 111 246799999999999643
No 57
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.26 E-value=4.3e-11 Score=120.39 Aligned_cols=134 Identities=15% Similarity=0.181 Sum_probs=84.0
Q ss_pred CCcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhC---------CCcc
Q 018414 88 YADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELG---------IDYD 158 (356)
Q Consensus 88 ~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G---------~~~~ 158 (356)
+.++||+|||||++|+++|+.|+++ |++|+||||...++.... +..+ .....+.++++| .++.
T Consensus 24 ~~~~dVlIVGaGpaGl~~A~~La~~-G~~V~vlEr~~~~~~~~~-~~~l------~~~~~~~l~~lGl~~~~~~~~~~~~ 95 (549)
T 2r0c_A 24 PIETDVLILGGGPVGMALALDLAHR-QVGHLVVEQTDGTITHPR-VGTI------GPRSMELFRRWGVAKQIRTAGWPGD 95 (549)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCSCCSSCC-CCEE------CHHHHHHHHHTTCHHHHHTSSCCTT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCCCCCCCc-eeee------CHHHHHHHHHcCChHHHHhhcCCcc
Confidence 3468999999999999999999999 999999999876542211 1111 111122222222 1110
Q ss_pred c----------cC---------------------CeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEE
Q 018414 159 E----------QD---------------------NYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGV 207 (356)
Q Consensus 159 ~----------~~---------------------~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv 207 (356)
. .+ ......+...+.+.|.+.+.+ . ++++++|+++..+++.+. +
T Consensus 96 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~-~---v~~~~~v~~~~~~~~~v~-v 170 (549)
T 2r0c_A 96 HPLDAAWVTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGE-R---LRTRSRLDSFEQRDDHVR-A 170 (549)
T ss_dssp SBCCEEEESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGG-G---EECSEEEEEEEECSSCEE-E
T ss_pred cccceEEeccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHH-h---cccCcEEEEEEEeCCEEE-E
Confidence 0 00 001223345666777777753 3 899999999998877765 3
Q ss_pred EEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCCC
Q 018414 208 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (356)
Q Consensus 208 ~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~ 243 (356)
.+.+ .. +|+..+++||+||.|+|+++.
T Consensus 171 ~~~~------~~---~G~~~~i~a~~vVgADG~~S~ 197 (549)
T 2r0c_A 171 TITD------LR---TGATRAVHARYLVACDGASSP 197 (549)
T ss_dssp EEEE------TT---TCCEEEEEEEEEEECCCTTCH
T ss_pred EEEE------CC---CCCEEEEEeCEEEECCCCCcH
Confidence 3321 00 122367999999999998763
No 58
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.26 E-value=2.5e-11 Score=115.36 Aligned_cols=135 Identities=13% Similarity=0.199 Sum_probs=85.5
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCcc--ccCCccchh----------------------------
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA--WLGGQLFSA---------------------------- 139 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~--~~~g~~~~~---------------------------- 139 (356)
++||+|||||++|+++|++|+++ |++|+|||+....++.. +....+...
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~-G~~V~vle~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~ 80 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRA-GLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQMLWDELSRHNED 80 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHT-TCCEEEECSSCSSSSSSSCCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHTTCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCCCCCCCCCCccceeeeccCCCchHHHHHHHHHHHHHHHHHhCCC
Confidence 48999999999999999999999 99999999986553211 111000000
Q ss_pred --hhc----------cc----hHHHHHHHhCCCcccc--------------CC-e---E----EEechHHHHHHHHHHHH
Q 018414 140 --MVV----------RK----PAHIFLDELGIDYDEQ--------------DN-Y---V----VIKHAALFTSTIMSKLL 181 (356)
Q Consensus 140 --~~~----------~~----~~~~~l~~~G~~~~~~--------------~~-~---~----~~~~~~~~~~~l~~~~~ 181 (356)
.+. .. ...+++..+|+++... .. + + ...+...+...|.+.+.
T Consensus 81 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~ 160 (372)
T 2uzz_A 81 DPIFVRSGVINLGPADSTFLANVAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAK 160 (372)
T ss_dssp SCSEECCCEEEEEETTCHHHHHHHHHHHHTTCCEEEEEHHHHHHHCTTCCCCTTEEEEEESSCEEEEHHHHHHHHHHHHH
T ss_pred ccceeeeceEEEeCCCcHHHHHHHHHHHHcCCCcEecCHHHHHhhCCCccCCCCceEEEeCCCcEEcHHHHHHHHHHHHH
Confidence 000 00 0112233344432110 00 0 0 12235677788888776
Q ss_pred cCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 182 ARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 182 ~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
+.|++++++++|+++..+++.+ .+.+. ..+++||.||+|+|.++
T Consensus 161 -~~G~~i~~~~~V~~i~~~~~~~-~v~~~---------------~g~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 161 -EAGCAQLFNCPVTAIRHDDDGV-TIETA---------------DGEYQAKKAIVCAGTWV 204 (372)
T ss_dssp -HTTCEEECSCCEEEEEECSSSE-EEEES---------------SCEEEEEEEEECCGGGG
T ss_pred -HCCCEEEcCCEEEEEEEcCCEE-EEEEC---------------CCeEEcCEEEEcCCccH
Confidence 5699999999999999876654 34442 13599999999999765
No 59
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.26 E-value=5.1e-11 Score=115.24 Aligned_cols=135 Identities=21% Similarity=0.296 Sum_probs=85.4
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCe-EEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCC---------Cccc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQ-IAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGI---------DYDE 159 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~-V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~---------~~~~ 159 (356)
++||+|||||++|+++|+.|++. |++ |+|+||...++.... +. .......+.|+++|+ +...
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~-G~~~v~v~E~~~~~~~~g~--g~-----~l~~~~~~~l~~lg~~~~l~~~~~~~~~ 75 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQA-GIGKVTLLESSSEIRPLGV--GI-----NIQPAAVEALAELGLGPALAATAIPTHE 75 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESSSSCCCCSC--EE-----EECHHHHHHHHHTTCHHHHHHHSEEECE
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCCCccccee--EE-----EEChHHHHHHHHCCChHHHHhhCCCcce
Confidence 48999999999999999999999 999 999999876542111 10 011122233333332 1100
Q ss_pred ------cC--------------Ce-EEEechHHHHHHHHHHHHcCCC-cEEEcCeEEEEEEEeCCeEEEEEEcceeeecc
Q 018414 160 ------QD--------------NY-VVIKHAALFTSTIMSKLLARPN-VKLFNAVAAEDLIVKGGRVGGVVTNWALVSMN 217 (356)
Q Consensus 160 ------~~--------------~~-~~~~~~~~~~~~l~~~~~~~~g-v~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~ 217 (356)
.+ .+ ....+...+.+.|++.+.+..| ++++++++|+++.. ++.+. +.+.+
T Consensus 76 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~-v~~~~------ 147 (410)
T 3c96_A 76 LRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRV-LIGAR------ 147 (410)
T ss_dssp EEEECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEE-EEEEE------
T ss_pred EEEEcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccE-EEEec------
Confidence 00 00 1233456777888888764334 68999999999988 55443 33321
Q ss_pred cCCCCCCCCeEEEcCEEEEcCCCCCC
Q 018414 218 HDTQSCMDPNVMEAKVVVSSCGHDGP 243 (356)
Q Consensus 218 ~~~~~~g~~~~i~Ak~VI~AtGg~~~ 243 (356)
.. +|+..+++||.||.|+|..+.
T Consensus 148 ~~---~g~~~~~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 148 DG---HGKPQALGADVLVGADGIHSA 170 (410)
T ss_dssp ET---TSCEEEEEESEEEECCCTTCH
T ss_pred CC---CCCceEEecCEEEECCCccch
Confidence 00 012357999999999997764
No 60
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.26 E-value=4.2e-11 Score=126.20 Aligned_cols=136 Identities=24% Similarity=0.336 Sum_probs=93.0
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccCCC--CCccccC-Cccch-------------------hhh-----
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSVSP--GGGAWLG-GQLFS-------------------AMV----- 141 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~~~--Gg~~~~~-g~~~~-------------------~~~----- 141 (356)
++||+|||||++|+++|++|+++ |. +|+||||+... +++++.. |.++. .+.
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~-G~~~V~vlE~~~~~~~~gss~~~~G~~~~~~~~~~~~~l~~~s~~~~~~l~~~~~~ 82 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTR-GWNNITVLDQGPLNMPGGSTSHAPGLVFQTNPSKTMASFAKYTVEKLLSLTEDGVS 82 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSCTTCCCSGGGTCCCEECCCCSCHHHHHHHHHHHHHHHHCEETTEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEeCCCCCCCcccceeCCceeecCCCCHHHHHHHHHHHHHHHHHHhhCCC
Confidence 48999999999999999999999 98 99999998753 4444332 22110 000
Q ss_pred ----------ccc--------hHHHHHHHhCCCcccc---------C---------CeE----EEechHHHHHHHHHHHH
Q 018414 142 ----------VRK--------PAHIFLDELGIDYDEQ---------D---------NYV----VIKHAALFTSTIMSKLL 181 (356)
Q Consensus 142 ----------~~~--------~~~~~l~~~G~~~~~~---------~---------~~~----~~~~~~~~~~~l~~~~~ 181 (356)
... ...+++..+|+++... . .++ ...+...+...|.+.+.
T Consensus 83 ~~~~~G~l~~~~~~~~~~~l~~~~~~~~~~G~~~~~l~~~e~~~~~p~l~~~~~~gg~~~~~~g~v~p~~l~~~L~~~a~ 162 (830)
T 1pj5_A 83 CFNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAECQELYPLLDGENILGGLHVPSDGLASAARAVQLLIKRTE 162 (830)
T ss_dssp SEECCCEEEEESSHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHCTTSCGGGCCEEEEETTCEEECHHHHHHHHHHHHH
T ss_pred CeeecCcEEEEeCHHHHHHHHHHHHHHHHcCCCeEEECHHHHHHhCccCCccceEEEEEECCCceEcHHHHHHHHHHHHH
Confidence 000 0112334455543210 0 000 12256778888888886
Q ss_pred cCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 182 ARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 182 ~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
+.|++++++++|++|..+++++.+|.+. ..+++||.||+|+|.++
T Consensus 163 -~~Gv~i~~~t~V~~i~~~~~~v~~V~t~---------------~G~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 163 -SAGVTYRGSTTVTGIEQSGGRVTGVQTA---------------DGVIPADIVVSCAGFWG 207 (830)
T ss_dssp -HTTCEEECSCCEEEEEEETTEEEEEEET---------------TEEEECSEEEECCGGGH
T ss_pred -HcCCEEECCceEEEEEEeCCEEEEEEEC---------------CcEEECCEEEECCccch
Confidence 5699999999999999988888878764 24799999999999765
No 61
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.25 E-value=7.9e-11 Score=117.14 Aligned_cols=141 Identities=13% Similarity=0.118 Sum_probs=87.6
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchh---hhc-------cc---------------
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSA---MVV-------RK--------------- 144 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~---~~~-------~~--------------- 144 (356)
.+||+|||||++|+++|+.|+++ |++|+||||....+|++.....+... +.. ..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~-G~~V~llE~~~~~~gtS~~s~gli~~g~~~~~~~~~~l~~~~~~~~~~l~~~~~~l 81 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGR-GLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHI 81 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSTTCSGGGSSCCEECCCGGGGGGTCHHHHHHHHHHHHHHHHHCTTT
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-CCCEEEEECCCCCCCccccccccccccchhhhhchHHHHHHHHHHHHHHHHhCCcc
Confidence 48999999999999999999999 99999999986554443322111100 000 00
Q ss_pred -----------------hH----HHHHHHhC-CCc------------cc-cCC----eE---EEechHHHHHHHHHHHHc
Q 018414 145 -----------------PA----HIFLDELG-IDY------------DE-QDN----YV---VIKHAALFTSTIMSKLLA 182 (356)
Q Consensus 145 -----------------~~----~~~l~~~G-~~~------------~~-~~~----~~---~~~~~~~~~~~l~~~~~~ 182 (356)
.. ...++.++ ..+ .. ... +. ...+...+...|.+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~P~l~~~~~~~~~~~~g~v~~~~l~~~l~~~a~- 160 (501)
T 2qcu_A 82 AFPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVV- 160 (501)
T ss_dssp EEEEEEEEECCTTTSCHHHHHHHHHHHHSSSCCSSSCCCEEEECCTTSSBCTTCCEEEEEEEEEECHHHHHHHHHHHHH-
T ss_pred ccccCeEeccCcccchHHHHHHHHHHHHhcCCcEEECHHHHHHhhcCCCcchhceEEEEeeCCEEcHHHHHHHHHHHHH-
Confidence 00 00011111 100 00 000 00 12356778888888886
Q ss_pred CCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 183 RPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 183 ~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
+.|++++++++|+++..++ ++.+|.+.+ .. +++..+++||.||+|+|.++
T Consensus 161 ~~Gv~i~~~~~V~~l~~~~-~~~~V~~~d------~~---~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 161 RKGGEVLTRTRATSARREN-GLWIVEAED------ID---TGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HTTCEEECSEEEEEEEEET-TEEEEEEEE------TT---TCCEEEEEESCEEECCGGGH
T ss_pred HcCCEEEcCcEEEEEEEeC-CEEEEEEEE------CC---CCCEEEEECCEEEECCChhH
Confidence 5699999999999999876 566676631 00 11234799999999999765
No 62
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.23 E-value=1.6e-11 Score=113.83 Aligned_cols=118 Identities=18% Similarity=0.250 Sum_probs=75.4
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
.|||+|||||+||++||+.|++. |++|+|+|+.. .|+.+. +|+++.....+.. .++ +.....
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~-g~~v~liE~~~-~gg~~~-~G~~~~~~~i~~~-------~g~--------~~~i~~ 65 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRS-SLKPVMYEGFM-AGGVAA-GGQLTTTTIIENF-------PGF--------PNGIDG 65 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCCEEECCSS-GGGCCT-TCGGGGSSEECCS-------TTC--------TTCEEH
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCCEEEEecCC-CCCccc-CCCcCChHHhhhc-------cCC--------cccCCH
Confidence 39999999999999999999999 99999999974 444443 4555543322110 011 111234
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
.++...+.+.+. +.++++... .+.......+... +.+. +..++.+|.||+|||+..
T Consensus 66 ~~l~~~~~~~~~-~~~~~~~~~-~v~~~~~~~~~~~-~~~~--------------~~~~~~~~~liiATG~~~ 121 (314)
T 4a5l_A 66 NELMMNMRTQSE-KYGTTIITE-TIDHVDFSTQPFK-LFTE--------------EGKEVLTKSVIIATGATA 121 (314)
T ss_dssp HHHHHHHHHHHH-HTTCEEECC-CEEEEECSSSSEE-EEET--------------TCCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHh-hcCcEEEEe-EEEEeecCCCceE-EEEC--------------CCeEEEEeEEEEcccccc
Confidence 556666555554 567887766 4544444433222 2222 247899999999999654
No 63
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.23 E-value=1.8e-10 Score=116.47 Aligned_cols=65 Identities=18% Similarity=0.157 Sum_probs=49.5
Q ss_pred chHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 168 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 168 ~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
+...+...+.+.+. +.|++++++++|+++..+++++.+|.+.+ ..+ ++..+++||.||+|+|.++
T Consensus 186 ~~~~l~~~l~~~a~-~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d------~~t---g~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 186 NDARLVIDNIKKAA-EDGAYLVSKMKAVGFLYEGDQIVGVKARD------LLT---DEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp CHHHHHHHHHHHHH-HTTCEEESSEEEEEEEEETTEEEEEEEEE------TTT---CCEEEEEBSCEEECCGGGH
T ss_pred chHHHHHHHHHHHH-HcCCeEEeccEEEEEEEeCCEEEEEEEEE------cCC---CCEEEEEcCEEEECCChhH
Confidence 34566777777765 67999999999999999988888887642 001 1235799999999999765
No 64
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.22 E-value=1.5e-10 Score=116.14 Aligned_cols=130 Identities=18% Similarity=0.180 Sum_probs=84.3
Q ss_pred cccEEEECCCHHHHHHHHHhh-cCCCCeEEEEeccCCCCCccccC---Cc---cchhhhccchHHHHHHHhCCCccccCC
Q 018414 90 DTDVVVVGAGSAGLSCAYELS-KNPNIQIAIIEQSVSPGGGAWLG---GQ---LFSAMVVRKPAHIFLDELGIDYDEQDN 162 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La-~~~G~~V~llEk~~~~Gg~~~~~---g~---~~~~~~~~~~~~~~l~~~G~~~~~~~~ 162 (356)
++||+|||||++|+++|+.|+ +. |++|+|+|+...+||.+... ++ .....+......+....+++. ..
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~-G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~----~~ 82 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHEL-GLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWK----TT 82 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT-CCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCS----BS
T ss_pred CCCEEEECcCHHHHHHHHHHHHcC-CCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCc----cc
Confidence 589999999999999999999 77 99999999998888754321 11 111111111011111222211 11
Q ss_pred eEEEechHHHHHHHHHHHHcCCCc--EEEcCeEEEEEEEeCC-eEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCC
Q 018414 163 YVVIKHAALFTSTIMSKLLARPNV--KLFNAVAAEDLIVKGG-RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCG 239 (356)
Q Consensus 163 ~~~~~~~~~~~~~l~~~~~~~~gv--~i~~~~~v~~i~~~~~-~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtG 239 (356)
.....++...+.+.+. +.++ +++++++|+++..+++ ..+.|.+.+ +.++++|.||+|+|
T Consensus 83 ---~~~~~ei~~~l~~~~~-~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~--------------G~~i~ad~lV~AtG 144 (540)
T 3gwf_A 83 ---YITQPEILEYLEDVVD-RFDLRRHFKFGTEVTSALYLDDENLWEVTTDH--------------GEVYRAKYVVNAVG 144 (540)
T ss_dssp ---EEEHHHHHHHHHHHHH-HTTCGGGEEESCCEEEEEEETTTTEEEEEETT--------------SCEEEEEEEEECCC
T ss_pred ---CCCHHHHHHHHHHHHH-HcCCcceeEeccEEEEEEEeCCCCEEEEEEcC--------------CCEEEeCEEEECCc
Confidence 2234556655555544 5677 8999999999998764 334455532 35789999999999
Q ss_pred CCC
Q 018414 240 HDG 242 (356)
Q Consensus 240 g~~ 242 (356)
..+
T Consensus 145 ~~s 147 (540)
T 3gwf_A 145 LLS 147 (540)
T ss_dssp SCC
T ss_pred ccc
Confidence 765
No 65
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.21 E-value=4e-11 Score=119.21 Aligned_cols=135 Identities=19% Similarity=0.131 Sum_probs=88.9
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCC-----ccccCCe
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGID-----YDEQDNY 163 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~-----~~~~~~~ 163 (356)
..+||+|||||++|+++|+.|++. |++|+|||+...+|+.... . ......+.+..+|+. |... .+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~-G~~V~liEk~~~~g~~~~~--~------~~~~~~~~l~~~g~~~~~~~~~~~-~~ 160 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALL-GARVVLVEKRIKFSRHNVL--H------LWPFTIHDLRALGAKKFYGRFCTG-TL 160 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCSSCCCCCEE--E------CCHHHHHHHHTTTHHHHCTTTTCT-TC
T ss_pred CCCCEEEECccHHHHHHHHHHHHC-CCeEEEEEeccccCCCCcc--c------CChhHHHHHHHcCCcccccccccc-cc
Confidence 468999999999999999999999 9999999999776542110 0 111233444444441 1111 11
Q ss_pred EEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEe--CCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 164 VVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK--GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 164 ~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~--~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
. ..+...+...|.+.+. +.|++++++++|+++..+ ++....|.+.. .. +++..+++||+||+|+|+.
T Consensus 161 ~-~~~~~~l~~~L~~~~~-~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~------~~---~g~~~~i~ad~VV~A~G~~ 229 (497)
T 2bry_A 161 D-HISIRQLQLLLLKVAL-LLGVEIHWGVKFTGLQPPPRKGSGWRAQLQP------NP---PAQLASYEFDVLISAAGGK 229 (497)
T ss_dssp C-EEEHHHHHHHHHHHHH-HTTCEEEESCEEEEEECCCSTTCCBEEEEES------CC---CHHHHTCCBSEEEECCCTT
T ss_pred c-cCCHHHHHHHHHHHHH-hCCCEEEeCCEEEEEEEecCCCCEEEEEEEE------CC---CCCEEEEEcCEEEECCCCC
Confidence 1 1234677777777776 479999999999999874 23334454421 00 0112468999999999988
Q ss_pred CCC
Q 018414 242 GPF 244 (356)
Q Consensus 242 ~~~ 244 (356)
+..
T Consensus 230 S~~ 232 (497)
T 2bry_A 230 FVP 232 (497)
T ss_dssp CCC
T ss_pred ccc
Confidence 754
No 66
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.21 E-value=1.4e-11 Score=123.63 Aligned_cols=138 Identities=17% Similarity=0.233 Sum_probs=86.1
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC--------CCCCccccCCccchhhhccchHH-HHHH----HhCCC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV--------SPGGGAWLGGQLFSAMVVRKPAH-IFLD----ELGID 156 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~--------~~Gg~~~~~g~~~~~~~~~~~~~-~~l~----~~G~~ 156 (356)
+|||+|||+|++|+.+|+++++. |++|+|||+.. ..||+|.+.||++.+.+...... +.+. .+|+.
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~-G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~ 120 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAH-GARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWK 120 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT-TCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCcc
Confidence 59999999999999999999999 99999999743 47999999999999887665432 2222 24554
Q ss_pred cccc-CCeEE-EechHHHHHHH---HHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEc
Q 018414 157 YDEQ-DNYVV-IKHAALFTSTI---MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEA 231 (356)
Q Consensus 157 ~~~~-~~~~~-~~~~~~~~~~l---~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A 231 (356)
+... .+|.. ..+.....+.+ +....++.||+++.+.. -..+.+.+.. .... . .++..++++
T Consensus 121 ~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a---~f~~~~~v~V-~~~~-------~---~~~~~~i~a 186 (542)
T 4b1b_A 121 FDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLA---KLKDKNTVSY-YLKG-------D---LSKEETVTG 186 (542)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEE---EEEETTEEEE-EEC------------CCCEEEEEE
T ss_pred cCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeE---EEcCCCcceE-eecc-------c---CCceEEEee
Confidence 3221 11110 01111222221 22223467999988742 2234444432 2210 0 113478999
Q ss_pred CEEEEcCCCCC
Q 018414 232 KVVVSSCGHDG 242 (356)
Q Consensus 232 k~VI~AtGg~~ 242 (356)
+++|+|||+..
T Consensus 187 ~~iiIATGs~P 197 (542)
T 4b1b_A 187 KYILIATGCRP 197 (542)
T ss_dssp EEEEECCCEEE
T ss_pred eeEEeccCCCC
Confidence 99999999654
No 67
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.21 E-value=2.2e-10 Score=114.60 Aligned_cols=65 Identities=12% Similarity=0.212 Sum_probs=48.3
Q ss_pred EEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeC-CeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCCC
Q 018414 165 VIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (356)
Q Consensus 165 ~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~ 243 (356)
...+...+.+.|.+.+.+..|++++++ +|+++..++ +.+..+.+.+ +.+++||.||+|+|..+.
T Consensus 170 ~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~--------------g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 170 YHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQ--------------NGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp EEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESS--------------SCEEECSEEEECSGGGCC
T ss_pred EEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECC--------------CCEEEcCEEEECCCcchH
Confidence 344667788888888874379999999 699998864 4455665532 245999999999998775
Q ss_pred C
Q 018414 244 F 244 (356)
Q Consensus 244 ~ 244 (356)
.
T Consensus 235 ~ 235 (526)
T 2pyx_A 235 L 235 (526)
T ss_dssp C
T ss_pred H
Confidence 4
No 68
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.20 E-value=2.6e-11 Score=117.32 Aligned_cols=136 Identities=20% Similarity=0.272 Sum_probs=80.9
Q ss_pred cccEEEECCCHHHHHHHHHhhcC-CCCeEEEEeccCCCCCcccc-CC-cc-chhhhcc------chHHHHHH-HhCC---
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWL-GG-QL-FSAMVVR------KPAHIFLD-ELGI--- 155 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~-~G~~V~llEk~~~~Gg~~~~-~g-~~-~~~~~~~------~~~~~~l~-~~G~--- 155 (356)
++||+|||||++|+++|+.|+++ ||++|+|||+....++.++. ++ .+ ....... ....+.+. ..+.
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 115 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSGKT 115 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSSCC
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCCCC
Confidence 58999999999999999999984 58999999998655444332 23 22 1111100 01111111 1111
Q ss_pred -CccccC---------------------------------C----e----EEEechHHHHHHHHHHHHcCCCcEEEcCeE
Q 018414 156 -DYDEQD---------------------------------N----Y----VVIKHAALFTSTIMSKLLARPNVKLFNAVA 193 (356)
Q Consensus 156 -~~~~~~---------------------------------~----~----~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~ 193 (356)
.+...+ . + ....+...+...|.+.+. +.|++++++++
T Consensus 116 ~~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~-~~Gv~i~~~~~ 194 (405)
T 3c4n_A 116 LEVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAI-GQGAGLLLNTR 194 (405)
T ss_dssp CCEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHH-TTTCEEECSCE
T ss_pred CcEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHH-HCCCEEEcCCE
Confidence 111100 0 0 012244667888888876 67999999999
Q ss_pred EE---------EEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 194 AE---------DLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 194 v~---------~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
|+ ++..+++++ +|.+. ..+++||.||+|+|.++
T Consensus 195 v~~~~g~~~~~~i~~~~~~v-~v~~~---------------~g~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 195 AELVPGGVRLHRLTVTNTHQ-IVVHE---------------TRQIRAGVIIVAAGAAG 236 (405)
T ss_dssp EEEETTEEEEECBCC--------CBC---------------CEEEEEEEEEECCGGGH
T ss_pred EEeccccccccceEeeCCeE-EEEEC---------------CcEEECCEEEECCCccH
Confidence 99 887666655 44332 24799999999999654
No 69
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.20 E-value=1.1e-10 Score=114.33 Aligned_cols=140 Identities=19% Similarity=0.104 Sum_probs=84.4
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCC--eEEEEeccCCCCCccccCCccc---------------------------hhh
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSVSPGGGAWLGGQLF---------------------------SAM 140 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~--~V~llEk~~~~Gg~~~~~g~~~---------------------------~~~ 140 (356)
.+||+|||||++|+++|+.|++. |. +|+|+|+...+||.....++.. ..+
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~-G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAE-KAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhc-CCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 58999999999999999999999 99 9999999987776433222100 000
Q ss_pred hc--cchHHHHHHHh-CCCccccCCeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecc
Q 018414 141 VV--RKPAHIFLDEL-GIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMN 217 (356)
Q Consensus 141 ~~--~~~~~~~l~~~-G~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~ 217 (356)
.. .......+..+ ++++... ...+.+...+.+.+.+.+. +.+..++++++|+.+..+++.+. |.+.+
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~-~~~~~i~~~t~V~~v~~~~~~~~-V~~~~------ 154 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQ--TLQFPHRHTIQEYQRIYAQ-PLLPFIKLATDVLDIEKKDGSWV-VTYKG------ 154 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTT--CCSSCBHHHHHHHHHHHHG-GGGGGEECSEEEEEEEEETTEEE-EEEEE------
T ss_pred hhhhccCCCHHHhccCCCCCCCC--CCCCCCHHHHHHHHHHHHH-HhhCeEEeCCEEEEEEeCCCeEE-EEEee------
Confidence 00 00000111111 2222221 1112244556666555554 45778999999999988776543 33321
Q ss_pred cCCCCCCC-CeEEEcCEEEEcCCCCCC
Q 018414 218 HDTQSCMD-PNVMEAKVVVSSCGHDGP 243 (356)
Q Consensus 218 ~~~~~~g~-~~~i~Ak~VI~AtGg~~~ 243 (356)
.. +++ ..++.+|.||+|||+++.
T Consensus 155 ~~---~G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 155 TK---AGSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp SS---TTCCEEEEEESEEEECCCSSSS
T ss_pred cC---CCCeeEEEEeCEEEECCCCCCC
Confidence 00 011 237999999999998653
No 70
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.20 E-value=3.8e-11 Score=120.03 Aligned_cols=137 Identities=17% Similarity=0.211 Sum_probs=87.1
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC--------CCCCccccCCccchhhhccch----HHHHHHHhCCC
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV--------SPGGGAWLGGQLFSAMVVRKP----AHIFLDELGID 156 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~--------~~Gg~~~~~g~~~~~~~~~~~----~~~~l~~~G~~ 156 (356)
.+|||+|||||++|+.+|+.|++. |++|+||||.+ .+||.|.+.||++.+.+.... ....+..+|+.
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~-G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~ 109 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQY-GKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWK 109 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcc
Confidence 469999999999999999999999 99999999954 678888888888877655432 23455667876
Q ss_pred ccccC--CeEEE-echHHHHHHH---HHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEE
Q 018414 157 YDEQD--NYVVI-KHAALFTSTI---MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVME 230 (356)
Q Consensus 157 ~~~~~--~~~~~-~~~~~~~~~l---~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~ 230 (356)
+.... +|... .+...+...+ ++...+..+++++.+. +..+ +.+.+. +... +++..+++
T Consensus 110 ~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~-a~~~--d~~~v~-v~~~------------~g~~~~i~ 173 (519)
T 3qfa_A 110 VEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAY-GQFI--GPHRIK-ATNN------------KGKEKIYS 173 (519)
T ss_dssp CCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSE-EEEE--ETTEEE-EECT------------TCCCCEEE
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEe--eCCEEE-EEcC------------CCCEEEEE
Confidence 54321 11111 1111222211 1222335789998884 3322 333322 2221 12345899
Q ss_pred cCEEEEcCCCCC
Q 018414 231 AKVVVSSCGHDG 242 (356)
Q Consensus 231 Ak~VI~AtGg~~ 242 (356)
+|+||+|||+..
T Consensus 174 ~d~lViATGs~p 185 (519)
T 3qfa_A 174 AERFLIATGERP 185 (519)
T ss_dssp EEEEEECCCEEE
T ss_pred CCEEEEECCCCc
Confidence 999999999643
No 71
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.20 E-value=1.9e-10 Score=117.82 Aligned_cols=139 Identities=20% Similarity=0.230 Sum_probs=86.2
Q ss_pred cccEEEECCCHHHHHHHHHhhc-CCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCC------------
Q 018414 90 DTDVVVVGAGSAGLSCAYELSK-NPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGID------------ 156 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~-~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~------------ 156 (356)
++||+|||||++||++|+.|++ . |++|+||||...++.... +.. ......+.++++|+.
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~-G~~V~viEr~~~~~~~g~-a~~------l~~~t~e~l~~lGl~~~~~~~~~~~~~ 103 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFP-DIRTCIVEQKEGPMELGQ-ADG------IACRTMEMFEAFEFADSILKEACWIND 103 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCT-TSCEEEECSSSSCCSSCS-CCE------ECHHHHHHHHHTTCHHHHHHHSEEECE
T ss_pred CCcEEEECcCHHHHHHHHHHHHhC-CCCEEEEeCCCCCCCCCc-eee------eCHHHHHHHHHcCcHHHHHHhcccccc
Confidence 5899999999999999999999 9 999999999875542211 101 111122233333221
Q ss_pred ---ccc-------------------c--CCeEEEechHHHHHHHHHHHHcCCCc--EEEcCeEEEEEEEeCC---eEEEE
Q 018414 157 ---YDE-------------------Q--DNYVVIKHAALFTSTIMSKLLARPNV--KLFNAVAAEDLIVKGG---RVGGV 207 (356)
Q Consensus 157 ---~~~-------------------~--~~~~~~~~~~~~~~~l~~~~~~~~gv--~i~~~~~v~~i~~~~~---~v~gv 207 (356)
+.. . .......+...+.+.|.+.+.+ .|+ +++++++|+++..+++ ..+.+
T Consensus 104 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~-~g~~v~v~~~~~v~~l~~~~~~~~~~v~v 182 (639)
T 2dkh_A 104 VTFWKPDPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRN-SPSRLEPHYARRVLDVKVDHGAADYPVTV 182 (639)
T ss_dssp EEEEEECTTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHH-STTCCCCBCSEEEEEEEECTTCSSCCEEE
T ss_pred eEEECCCCCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHh-CCCCcEEecCCEEEEEEECCCCCcCCEEE
Confidence 000 0 0112234556777888888874 455 9999999999998752 12234
Q ss_pred EEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCCC
Q 018414 208 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (356)
Q Consensus 208 ~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~ 243 (356)
.+.+ .....+|+..+++||+||.|+|+++.
T Consensus 183 ~~~~------~~~~~~G~~~~i~a~~vVgADG~~S~ 212 (639)
T 2dkh_A 183 TLER------CDAAHAGQIETVQARYVVGCDGARSN 212 (639)
T ss_dssp EEEE------CSGGGTTCEEEEEEEEEEECCCTTCH
T ss_pred EEEe------ccccCCCCeEEEEeCEEEECCCcchH
Confidence 3321 00000123467999999999997763
No 72
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.19 E-value=4.8e-11 Score=117.14 Aligned_cols=137 Identities=15% Similarity=0.160 Sum_probs=83.1
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCC-----CeEEEEeccCCCCCccccCCccchhhhc----------------cchHH
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPN-----IQIAIIEQSVSPGGGAWLGGQLFSAMVV----------------RKPAH 147 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G-----~~V~llEk~~~~Gg~~~~~g~~~~~~~~----------------~~~~~ 147 (356)
..|||+|||||++|+++|+.|++. | .+|+|||+...+| |..+.++..... .....
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~-g~~~~~~~v~liE~~~~~g---~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~ 104 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQER-AQAQGALEVLFLDKQGDYR---WHGNTLVSQSELQISFLKDLVSLRNPTSPYSFV 104 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHH-HHHHCCCCEEEEESCSSCC---SSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhc-ccccCcccEEEEecCCCCC---CcCCCCCCCCcCCcchhhccccccCCCCCCChh
Confidence 358999999999999999999998 8 9999999998766 433322111000 01122
Q ss_pred HHHHHhCCCcc--ccCCeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEe--CCeEEE--EEEcceeeecccCCC
Q 018414 148 IFLDELGIDYD--EQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK--GGRVGG--VVTNWALVSMNHDTQ 221 (356)
Q Consensus 148 ~~l~~~G~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~--~~~v~g--v~~~~~~~~~~~~~~ 221 (356)
.|+...+..+. ....+ +.....+...+ +...++.+++++++++|+++..+ +++.+. |.+.+ .
T Consensus 105 ~~l~~~~~~~~~~~~~~~--~~~~~~~~~~l-~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~------g--- 172 (463)
T 3s5w_A 105 NYLHKHDRLVDFINLGTF--YPCRMEFNDYL-RWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRN------A--- 172 (463)
T ss_dssp HHHHHTTCHHHHHHHCCS--CCBHHHHHHHH-HHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEE------T---
T ss_pred HhhhhcCceeecccccCC--CCCHHHHHHHH-HHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEec------C---
Confidence 34443332110 00111 11234454444 34444678999999999999876 244432 33321 0
Q ss_pred CCCCCeEEEcCEEEEcCCCCC
Q 018414 222 SCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 222 ~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
.++..++.+|.||+|||+..
T Consensus 173 -~g~~~~~~~d~lVlAtG~~p 192 (463)
T 3s5w_A 173 -DGEELVRTTRALVVSPGGTP 192 (463)
T ss_dssp -TSCEEEEEESEEEECCCCEE
T ss_pred -CCceEEEEeCEEEECCCCCC
Confidence 01234899999999999743
No 73
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.19 E-value=8.7e-11 Score=114.80 Aligned_cols=59 Identities=10% Similarity=0.038 Sum_probs=46.7
Q ss_pred chHHHHHHHHHHHHcCCCcEEEcCeEEEEEEE---------------eCCeEEEEEEcceeeecccCCCCCCCCeEE--E
Q 018414 168 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIV---------------KGGRVGGVVTNWALVSMNHDTQSCMDPNVM--E 230 (356)
Q Consensus 168 ~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~---------------~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i--~ 230 (356)
+...+...|.+.+. +.|++++++++|++|.. +++++.+|.+.+ .++ +
T Consensus 179 ~~~~l~~~L~~~~~-~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~---------------g~i~~~ 242 (448)
T 3axb_A 179 DAEKVVDYYYRRAS-GAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSD---------------GTRVEV 242 (448)
T ss_dssp CHHHHHHHHHHHHH-HTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETT---------------SCEEEE
T ss_pred cHHHHHHHHHHHHH-hCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCC---------------CEEeec
Confidence 45678888888876 56999999999999998 566777776642 257 9
Q ss_pred cCEEEEcCCCCC
Q 018414 231 AKVVVSSCGHDG 242 (356)
Q Consensus 231 Ak~VI~AtGg~~ 242 (356)
||.||+|+|+++
T Consensus 243 Ad~VV~AtG~~s 254 (448)
T 3axb_A 243 GEKLVVAAGVWS 254 (448)
T ss_dssp EEEEEECCGGGH
T ss_pred CCEEEECCCcCH
Confidence 999999999664
No 74
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.19 E-value=8.3e-11 Score=109.53 Aligned_cols=116 Identities=18% Similarity=0.205 Sum_probs=79.7
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
.+||+|||||++|+++|+.|+++ |++|+|+|+.+.+||..+. ..+...+ .....++. ...
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~~~gG~~~~--~~~~~~~----------------~~~~~~~~-~~~ 66 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMR-QASVKIIESLPQLGGQLSA--LYPEKYI----------------YDVAGFPK-IRA 66 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCHHHHH--HCTTSEE----------------CCSTTCSS-EEH
T ss_pred cceEEEECCCHHHHHHHHHHHHC-CCCEEEEEcCCCCCceehh--cCCCceE----------------eccCCCCC-CCH
Confidence 48999999999999999999999 9999999999877754311 0000000 00001110 124
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
.++...+.+.+. +.+++++++++|+++..+++..+.+.+.+ .++.+|+||+|||..
T Consensus 67 ~~~~~~~~~~~~-~~~~~~~~~~~v~~i~~~~~~~~~v~~~~---------------g~~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 67 QELINNLKEQMA-KFDQTICLEQAVESVEKQADGVFKLVTNE---------------ETHYSKTVIITAGNG 122 (332)
T ss_dssp HHHHHHHHHHHT-TSCCEEECSCCEEEEEECTTSCEEEEESS---------------EEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHH-HhCCcEEccCEEEEEEECCCCcEEEEECC---------------CEEEeCEEEECCCCC
Confidence 566666666664 67999999999999988765233344431 349999999999983
No 75
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.19 E-value=1.1e-10 Score=110.58 Aligned_cols=118 Identities=20% Similarity=0.229 Sum_probs=80.9
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
.+||+|||||++|+++|+.|++. |++|+|||+...+||.+... .+...+ +. ...++. ...
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~~~gg~~~~~--~~~~~~---------------~~-~~~~~~-~~~ 73 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMN-NISCRIIESMPQLGGQLAAL--YPEKHI---------------YD-VAGFPE-VPA 73 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCHHHHHT--CTTSEE---------------CC-STTCSS-EEH
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCCEEEEecCCCCCCccccc--CCCccc---------------cc-CCCCCC-CCH
Confidence 58999999999999999999999 99999999988776543210 000000 00 001110 134
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
..+.+.+.+.+. +.+++++++++|+.+..+++....+.+. +..++++|+||+|+|..+
T Consensus 74 ~~~~~~l~~~~~-~~~~~~~~~~~v~~i~~~~~~~~~v~~~--------------~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 74 IDLVESLWAQAE-RYNPDVVLNETVTKYTKLDDGTFETRTN--------------TGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp HHHHHHHHHHHH-TTCCEEECSCCEEEEEECTTSCEEEEET--------------TSCEEEEEEEEECCTTCS
T ss_pred HHHHHHHHHHHH-HhCCEEEcCCEEEEEEECCCceEEEEEC--------------CCcEEEeeEEEEccCCCc
Confidence 566677777665 6789999999999998865422234442 135799999999999854
No 76
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.18 E-value=1.5e-10 Score=114.58 Aligned_cols=56 Identities=7% Similarity=0.040 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
.+.+.|.+.+. +.|++|+++++|++|..+++++.+|.+.+ +.++.||.||.+++..
T Consensus 222 ~l~~aL~~~~~-~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~--------------g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 222 ALVQGMIKLFQ-DLGGEVVLNARVSHMETTGNKIEAVHLED--------------GRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHH-HTTCEEECSCCEEEEEEETTEEEEEEETT--------------SCEEECSCEEECCC--
T ss_pred chHHHHHHHHH-HhCCceeeecceeEEEeeCCeEEEEEecC--------------CcEEEcCEEEECCCHH
Confidence 45566666665 67999999999999999999999999863 4789999999988854
No 77
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.18 E-value=1.2e-10 Score=107.88 Aligned_cols=111 Identities=19% Similarity=0.230 Sum_probs=76.5
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
.+||+|||||++|+++|+.|+++ |++|+|+|+. +||........... ..+.. ...
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~--~gg~~~~~~~~~~~---------------------~~~~~-~~~ 69 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARY-MLKTLVIGET--PGGQLTEAGIVDDY---------------------LGLIE-IQA 69 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS--TTGGGGGCCEECCS---------------------TTSTT-EEH
T ss_pred ccCEEEECccHHHHHHHHHHHHC-CCcEEEEecc--CCCeeccccccccc---------------------CCCCC-CCH
Confidence 58999999999999999999999 9999999998 55543321111000 00000 234
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
.++...+.+.+. +.|+++++ ++|+++..+++.+. +.+. +..++.+|.||+|+|...
T Consensus 70 ~~~~~~~~~~~~-~~~v~~~~-~~v~~i~~~~~~~~-v~~~--------------~g~~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 70 SDMIKVFNKHIE-KYEVPVLL-DIVEKIENRGDEFV-VKTK--------------RKGEFKADSVILGIGVKR 125 (323)
T ss_dssp HHHHHHHHHHHH-TTTCCEEE-SCEEEEEEC--CEE-EEES--------------SSCEEEEEEEEECCCCEE
T ss_pred HHHHHHHHHHHH-HcCCEEEE-EEEEEEEecCCEEE-EEEC--------------CCCEEEcCEEEECcCCCC
Confidence 566666666665 67999999 79999987765432 3332 135799999999999764
No 78
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.18 E-value=5.6e-11 Score=117.78 Aligned_cols=136 Identities=20% Similarity=0.255 Sum_probs=85.9
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEec--------cCCCCCccccCCccchhhhccch----HHHHHHHhCCCc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQ--------SVSPGGGAWLGGQLFSAMVVRKP----AHIFLDELGIDY 157 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk--------~~~~Gg~~~~~g~~~~~~~~~~~----~~~~l~~~G~~~ 157 (356)
+|||+|||||++|+++|+.|++. |++|+|||| ...+||.|.+.||++.+.+.... ....+..+|+.+
T Consensus 6 ~~DvvVIG~G~aGl~aA~~la~~-G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 6 SFDLLVIGGGSGGLACAKEAAQL-GKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 59999999999999999999999 999999998 45688888888888877665432 234456678766
Q ss_pred ccc--CCeEEE-echHHHHHHH---HHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEc
Q 018414 158 DEQ--DNYVVI-KHAALFTSTI---MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEA 231 (356)
Q Consensus 158 ~~~--~~~~~~-~~~~~~~~~l---~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A 231 (356)
... .+|... .+...+...+ ++...++.+++++.+. +..+ +...+ .+... +++..++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~-~~~~--~~~~v-~v~~~------------~g~~~~~~~ 148 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIK-ASFV--DEHTV-RGVDK------------GGKATLLSA 148 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCE-EEES--SSSEE-EEECT------------TSCEEEEEE
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEc--cCCeE-EEEeC------------CCceEEEEC
Confidence 432 122111 1111222211 2222335689988774 2221 22322 22221 112367999
Q ss_pred CEEEEcCCCCC
Q 018414 232 KVVVSSCGHDG 242 (356)
Q Consensus 232 k~VI~AtGg~~ 242 (356)
|+||+|||+..
T Consensus 149 d~lViATGs~p 159 (488)
T 3dgz_A 149 EHIVIATGGRP 159 (488)
T ss_dssp EEEEECCCEEE
T ss_pred CEEEEcCCCCC
Confidence 99999999643
No 79
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.16 E-value=3.9e-10 Score=113.08 Aligned_cols=64 Identities=16% Similarity=0.191 Sum_probs=48.5
Q ss_pred EEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeC-CeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCCC
Q 018414 165 VIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (356)
Q Consensus 165 ~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~ 243 (356)
...+...+...|.+.+. +.|++++++ +|+++..++ +.+.+|.+.+ +.+++||.||+|+|..+.
T Consensus 160 ~~i~~~~l~~~L~~~a~-~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~--------------g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 160 WHFDAHLVADFLKRWAV-ERGVNRVVD-EVVDVRLNNRGYISNLLTKE--------------GRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp EEECHHHHHHHHHHHHH-HTTCEEEEC-CEEEEEECTTSCEEEEEETT--------------SCEECCSEEEECCGGGCC
T ss_pred EEEeHHHHHHHHHHHHH-HCCCEEEEe-eEeEEEEcCCCcEEEEEECC--------------CcEEEeCEEEECCCCchh
Confidence 34456778888888876 479999999 899998864 4556666542 247999999999998775
Q ss_pred C
Q 018414 244 F 244 (356)
Q Consensus 244 ~ 244 (356)
.
T Consensus 224 ~ 224 (538)
T 2aqj_A 224 L 224 (538)
T ss_dssp C
T ss_pred h
Confidence 4
No 80
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.15 E-value=9.1e-11 Score=116.10 Aligned_cols=136 Identities=20% Similarity=0.250 Sum_probs=84.2
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC---------CCCCccccCCccchhhhccch----HHHHHHHhCC
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV---------SPGGGAWLGGQLFSAMVVRKP----AHIFLDELGI 155 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~---------~~Gg~~~~~g~~~~~~~~~~~----~~~~l~~~G~ 155 (356)
.+|||+|||||++|+++|+.|++. |++|+||||.. ..||.|.+.||++.+.+.... ....+..+|+
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~-G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~ 86 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLN-GARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGW 86 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCc
Confidence 469999999999999999999999 99999999521 378888888888877665432 2345566777
Q ss_pred CccccC--CeEEE-echHHHHHHH---HHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEE
Q 018414 156 DYDEQD--NYVVI-KHAALFTSTI---MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVM 229 (356)
Q Consensus 156 ~~~~~~--~~~~~-~~~~~~~~~l---~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i 229 (356)
.+.... +|... .....+.+.+ +....+..+++++.+.. . ..+.+.+. +...+ + ..++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a-~--~~~~~~v~-v~~~~------------g-~~~~ 149 (483)
T 3dgh_A 87 NVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLG-S--FVDSHTLL-AKLKS------------G-ERTI 149 (483)
T ss_dssp CCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEE-E--EEETTEEE-EECTT------------C-CEEE
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEE-E--EccCCEEE-EEeCC------------C-eEEE
Confidence 654321 11110 1111122111 11223356899988743 2 12333322 22211 1 2579
Q ss_pred EcCEEEEcCCCCC
Q 018414 230 EAKVVVSSCGHDG 242 (356)
Q Consensus 230 ~Ak~VI~AtGg~~ 242 (356)
++|+||+|||+..
T Consensus 150 ~~d~lviATGs~p 162 (483)
T 3dgh_A 150 TAQTFVIAVGGRP 162 (483)
T ss_dssp EEEEEEECCCEEE
T ss_pred EcCEEEEeCCCCc
Confidence 9999999999643
No 81
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=99.15 E-value=1.1e-10 Score=117.96 Aligned_cols=56 Identities=20% Similarity=0.218 Sum_probs=43.4
Q ss_pred HHHHHcCCCcEEEcCeEEEEEEEe----CCeEEEEEEcceeeecccCCCCCCCCeEEEcC-EEEEcCCCCC
Q 018414 177 MSKLLARPNVKLFNAVAAEDLIVK----GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAK-VVVSSCGHDG 242 (356)
Q Consensus 177 ~~~~~~~~gv~i~~~~~v~~i~~~----~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak-~VI~AtGg~~ 242 (356)
+..+.++.|++|++++.|++|+++ +++++||.+.. . +|...+++|+ -||+|+|+++
T Consensus 233 L~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~------~----~G~~~~v~A~kEVILsAGa~~ 293 (583)
T 3qvp_A 233 LLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGT------H----KGNTHNVYAKHEVLLAAGSAV 293 (583)
T ss_dssp TTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEES------S----TTCEEEEEEEEEEEECSCTTT
T ss_pred HHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEe------c----CCcEEEEEECCEEEEeCCccC
Confidence 333345789999999999999998 67899998742 0 2345778896 6999999886
No 82
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.15 E-value=2.4e-10 Score=106.98 Aligned_cols=116 Identities=22% Similarity=0.263 Sum_probs=79.4
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
++||+|||||++|+++|+.|++. |++|+|+|+...+||.+... .+...+. ....++. ...
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~~~gg~~~~~--~~~~~~~----------------~~~~~~~-~~~ 64 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMR-GLSFRFVDPLPEPGGQLTAL--YPEKYIY----------------DVAGFPK-VYA 64 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSSCHHHHHT--CTTSEEC----------------CSTTCSS-EEH
T ss_pred cCcEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCCCCCeeecc--CCCceee----------------ccCCCCC-CCH
Confidence 58999999999999999999999 99999999988776533210 0000000 0001111 123
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
..+...+.+.+. +.+++++++++|+.+..+++.+ .+.+. +..++++|.||+|||..
T Consensus 65 ~~~~~~l~~~~~-~~~~~~~~~~~v~~i~~~~~~~-~v~~~--------------~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 65 KDLVKGLVEQVA-PFNPVYSLGERAETLEREGDLF-KVTTS--------------QGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp HHHHHHHHHHHG-GGCCEEEESCCEEEEEEETTEE-EEEET--------------TSCEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHH-HcCCEEEeCCEEEEEEECCCEE-EEEEC--------------CCCEEEeCEEEECCCCC
Confidence 566666666664 5689999999999998876633 23332 13578999999999975
No 83
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.14 E-value=1.5e-10 Score=114.70 Aligned_cols=135 Identities=24% Similarity=0.381 Sum_probs=82.9
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchH-HHH----HHHhCCCcccc-CCe
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPA-HIF----LDELGIDYDEQ-DNY 163 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~-~~~----l~~~G~~~~~~-~~~ 163 (356)
+|||+|||||++|+++|+.|++. |++|+||||...+||.|++.+|++.+.+..... ... +..+|+..... .+|
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~-G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 103 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQL-GMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLNL 103 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccCH
Confidence 59999999999999999999999 999999999888999998888887766554322 122 23344432211 011
Q ss_pred EEE-echHHHHHH---HHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCC
Q 018414 164 VVI-KHAALFTST---IMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCG 239 (356)
Q Consensus 164 ~~~-~~~~~~~~~---l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtG 239 (356)
... .+...+... .++...++.+++++.+.... .+.+.+ .+... +++..++++|.||+|||
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~---~~~~~~-~v~~~------------~g~~~~~~~d~lViATG 167 (491)
T 3urh_A 104 QKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKV---LGQGKV-SVTNE------------KGEEQVLEAKNVVIATG 167 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE---CSSSEE-EEECT------------TSCEEEEECSEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE---ecCCEE-EEEeC------------CCceEEEEeCEEEEccC
Confidence 000 011111111 12223346789998885332 233332 22221 12236799999999999
Q ss_pred CC
Q 018414 240 HD 241 (356)
Q Consensus 240 g~ 241 (356)
..
T Consensus 168 s~ 169 (491)
T 3urh_A 168 SD 169 (491)
T ss_dssp EE
T ss_pred CC
Confidence 65
No 84
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.14 E-value=1.5e-10 Score=116.44 Aligned_cols=134 Identities=16% Similarity=0.171 Sum_probs=81.6
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchH-HHHHHHhCC--CccccCCeEE
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPA-HIFLDELGI--DYDEQDNYVV 165 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~-~~~l~~~G~--~~~~~~~~~~ 165 (356)
.++||+|||||++|+.+|+.|++. |++|+|||++..+||.. ...+++...+..... ..+.-.-.. .+.....
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~-g~~v~iiE~~~~~GGtw-~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~--- 82 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQA-GMKVLGIEAGEDVGGTW-YWNRYPGCRLDTESYAYGYFALKGIIPEWEWSEN--- 82 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTHH-HHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBS---
T ss_pred CCCCEEEECccHHHHHHHHHHHhC-CCCEEEEeCCCCCCCcc-ccCCCCceeecCchhhcccccCcccccCCCcccc---
Confidence 468999999999999999999998 99999999998888753 222222111111100 000000000 0111111
Q ss_pred EechHHHHHHHHHHHHcCCCc--EEEcCeEEEEEEEeCC-eEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 166 IKHAALFTSTIMSKLLARPNV--KLFNAVAAEDLIVKGG-RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 166 ~~~~~~~~~~l~~~~~~~~gv--~i~~~~~v~~i~~~~~-~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
.....++...+.+.+. +.++ .++++++|+++..+++ ..+.|.+.+ +.++++|+||+|+|..+
T Consensus 83 ~~~~~ei~~yl~~~~~-~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~--------------G~~~~ad~lV~AtG~~s 147 (545)
T 3uox_A 83 FASQPEMLRYVNRAAD-AMDVRKHYRFNTRVTAARYVENDRLWEVTLDN--------------EEVVTCRFLISATGPLS 147 (545)
T ss_dssp SCBHHHHHHHHHHHHH-HHTCGGGEECSCCEEEEEEEGGGTEEEEEETT--------------TEEEEEEEEEECCCSCB
T ss_pred CCCHHHHHHHHHHHHH-HcCCcCcEEECCEEEEEEEeCCCCEEEEEECC--------------CCEEEeCEEEECcCCCC
Confidence 1233455444443333 4455 7889999999988653 334455532 36799999999999654
No 85
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.14 E-value=3e-10 Score=108.83 Aligned_cols=129 Identities=14% Similarity=0.039 Sum_probs=76.1
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCC--------------
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGID-------------- 156 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~-------------- 156 (356)
.+|+|||||++||++|+.|+++ |++|+|+||.+.+..... +..+ .......+.|+++|+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~-G~~v~v~Er~~~~~~~~~-G~~i----~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~ 75 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH-GIKVTIYERNSAASSILP-GYGI----HINSFGKQALQECLPAENWLAFEEASRYIG 75 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCSSCSSCC-CCEE----EECHHHHHHHHHHSCHHHHHHHHHHCEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCCEEEEecCCCCCcCCC-ceEE----eeCHHHHHHHHHcCChHHHHHhhhhhcccC
Confidence 3799999999999999999999 999999999865432111 1011 0111122222222220
Q ss_pred ----cc-ccCCe------------------EEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEccee
Q 018414 157 ----YD-EQDNY------------------VVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWAL 213 (356)
Q Consensus 157 ----~~-~~~~~------------------~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~ 213 (356)
+. ..... ....+...+.+.| .+..+.+++++++++++...++..+.+...+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L----~~~~~~~v~~~~~v~~~~~~~~~~v~v~~~d-- 149 (412)
T 4hb9_A 76 GQSRFYNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEIL----NKGLANTIQWNKTFVRYEHIENGGIKIFFAD-- 149 (412)
T ss_dssp CCCEEECTTSCEEEC--------------CEEEEEHHHHHHHH----HTTCTTTEECSCCEEEEEECTTSCEEEEETT--
T ss_pred cceeEecCCcceecccCCccccccccccccceEeeHHHHHHHH----HhhccceEEEEEEEEeeeEcCCCeEEEEECC--
Confidence 00 00000 0111223333333 3344567899999999987654323344432
Q ss_pred eecccCCCCCCCCeEEEcCEEEEcCCCCCC
Q 018414 214 VSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (356)
Q Consensus 214 ~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~ 243 (356)
+.+++||+||.|+|..|.
T Consensus 150 ------------G~~~~adlvVgADG~~S~ 167 (412)
T 4hb9_A 150 ------------GSHENVDVLVGADGSNSK 167 (412)
T ss_dssp ------------SCEEEESEEEECCCTTCH
T ss_pred ------------CCEEEeeEEEECCCCCcc
Confidence 467899999999998763
No 86
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.14 E-value=6.2e-10 Score=111.95 Aligned_cols=65 Identities=18% Similarity=0.195 Sum_probs=49.0
Q ss_pred EEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeC-CeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCCC
Q 018414 165 VIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (356)
Q Consensus 165 ~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~ 243 (356)
...+...+.+.|.+.+.+..|++++++ +|+++..++ +.+.+|.+.+ +.+++||.||+|+|..+.
T Consensus 189 ~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~--------------G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 189 WHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTAT--------------GRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp EEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETT--------------SCEEECSEEEECCGGGCC
T ss_pred eEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECC--------------CCEEECCEEEECCCCchh
Confidence 334567788888888764339999999 999998754 5566676642 357999999999998775
Q ss_pred C
Q 018414 244 F 244 (356)
Q Consensus 244 ~ 244 (356)
.
T Consensus 254 ~ 254 (550)
T 2e4g_A 254 L 254 (550)
T ss_dssp C
T ss_pred h
Confidence 4
No 87
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.13 E-value=5.7e-10 Score=104.31 Aligned_cols=134 Identities=13% Similarity=0.110 Sum_probs=77.9
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCcccc---CCccch---hhh-cc-chHHHHHHH---hCCCcc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWL---GGQLFS---AMV-VR-KPAHIFLDE---LGIDYD 158 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~---~g~~~~---~~~-~~-~~~~~~l~~---~G~~~~ 158 (356)
.+||+|||||++|+++|+.|++. |++|+||||...+|+.... .+..+. ..+ .. ....+.+.. .+....
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~-G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAA-GHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAE 80 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHC-CCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeee
Confidence 37999999999999999999999 9999999999877654321 110000 000 01 111222222 221100
Q ss_pred ccC----------------CeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCC
Q 018414 159 EQD----------------NYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQS 222 (356)
Q Consensus 159 ~~~----------------~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~ 222 (356)
... ...+... .-...+.+.+. + |++++++++|+++..+++.+. +.+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~l~-~-g~~i~~~~~v~~i~~~~~~~~-v~~~~----------- 144 (336)
T 1yvv_A 81 WTPLLYNFHAGRLSPSPDEQVRWVGK--PGMSAITRAMR-G-DMPVSFSCRITEVFRGEEHWN-LLDAE----------- 144 (336)
T ss_dssp ECCCEEEESSSBCCCCCTTSCEEEES--SCTHHHHHHHH-T-TCCEECSCCEEEEEECSSCEE-EEETT-----------
T ss_pred ccccceeccCcccccCCCCCccEEcC--ccHHHHHHHHH-c-cCcEEecCEEEEEEEeCCEEE-EEeCC-----------
Confidence 000 0011110 11233445554 2 899999999999998877654 43431
Q ss_pred CCCCeEEEcCEEEEcCCCCC
Q 018414 223 CMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 223 ~g~~~~i~Ak~VI~AtGg~~ 242 (356)
| ....++++||+|+|..+
T Consensus 145 -g-~~~~~a~~vV~a~g~~~ 162 (336)
T 1yvv_A 145 -G-QNHGPFSHVIIATPAPQ 162 (336)
T ss_dssp -S-CEEEEESEEEECSCHHH
T ss_pred -C-cCccccCEEEEcCCHHH
Confidence 1 13335999999999543
No 88
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.12 E-value=6.1e-11 Score=117.34 Aligned_cols=144 Identities=18% Similarity=0.211 Sum_probs=85.1
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccch----HHHHHHHhCCCcccc-CCeE
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKP----AHIFLDELGIDYDEQ-DNYV 164 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~----~~~~l~~~G~~~~~~-~~~~ 164 (356)
+|||+|||||++|+++|+.|++. |++|+|||+...+||.+++.++++.+.+.... ..+++..+|+++... .++.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~-G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADE-GLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDID 84 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHH
Confidence 58999999999999999999999 99999999988888888777776655443321 123344456655321 1111
Q ss_pred E-EechHH----HHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceee-ecccCCCCCCCCeEEEcCEEEEcC
Q 018414 165 V-IKHAAL----FTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALV-SMNHDTQSCMDPNVMEAKVVVSSC 238 (356)
Q Consensus 165 ~-~~~~~~----~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~-~~~~~~~~~g~~~~i~Ak~VI~At 238 (356)
. ...... +...+.+.+ ++.|++++.++.+. .+++.+. +...++.. ..... +++..++++|+||+||
T Consensus 85 ~~~~~~~~~~~~l~~~~~~~~-~~~gv~~~~g~~~~---~~~~~v~-v~~~~g~~~~~~~~---~g~~~~i~ad~lViAt 156 (482)
T 1ojt_A 85 MLRAYKDGVVSRLTGGLAGMA-KSRKVDVIQGDGQF---LDPHHLE-VSLTAGDAYEQAAP---TGEKKIVAFKNCIIAA 156 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHTTCEEEEEEEEE---EETTEEE-EEEEEEEETTEEEE---EEEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhCCcEEEeeEEEE---ccCCEEE-EEecCCcccccccc---cCcceEEEcCEEEECC
Confidence 0 001111 112222333 35799999987543 3444433 22211000 00000 0112578999999999
Q ss_pred CCCC
Q 018414 239 GHDG 242 (356)
Q Consensus 239 Gg~~ 242 (356)
|+..
T Consensus 157 Gs~p 160 (482)
T 1ojt_A 157 GSRV 160 (482)
T ss_dssp CEEE
T ss_pred CCCC
Confidence 9764
No 89
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.12 E-value=5e-10 Score=108.62 Aligned_cols=40 Identities=33% Similarity=0.583 Sum_probs=37.9
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccc
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAW 131 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~ 131 (356)
|||+|||||++|+++|+.|++. |++|+|||+...+||.++
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~-G~~V~vlE~~~~~GG~~~ 41 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA-GKKVLLLEGGERLGGRAY 41 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSSSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHc-CCeEEEEecCCCccCeec
Confidence 7999999999999999999999 999999999888888775
No 90
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.12 E-value=4.2e-10 Score=111.95 Aligned_cols=64 Identities=14% Similarity=0.142 Sum_probs=49.6
Q ss_pred EEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEe-CCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCCC
Q 018414 165 VIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (356)
Q Consensus 165 ~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~ 243 (356)
...+...+...|.+.+. +.|++++++ +|+++..+ ++.+.+|.+.+ +.+++||.||+|+|.++.
T Consensus 168 ~~~~~~~l~~~L~~~a~-~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~--------------g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 168 YHFDADEVARYLSEYAI-ARGVRHVVD-DVQHVGQDERGWISGVHTKQ--------------HGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp EEECHHHHHHHHHHHHH-HTTCEEEEC-CEEEEEECTTSCEEEEEESS--------------SCEEECSEEEECCGGGCC
T ss_pred EEEcHHHHHHHHHHHHH-HCCCEEEEC-eEeEEEEcCCCCEEEEEECC--------------CCEEEcCEEEECCCcchH
Confidence 44567788888888887 479999999 99999885 45566666642 247999999999998775
Q ss_pred C
Q 018414 244 F 244 (356)
Q Consensus 244 ~ 244 (356)
.
T Consensus 232 ~ 232 (511)
T 2weu_A 232 L 232 (511)
T ss_dssp C
T ss_pred H
Confidence 4
No 91
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.12 E-value=6.4e-10 Score=107.71 Aligned_cols=38 Identities=39% Similarity=0.538 Sum_probs=35.9
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~ 130 (356)
||+|||||++||++|++|+++ |++|+|+||+..+||.+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-G~~V~vlE~~~~~GG~~ 39 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN-GHEIIVLEKSAMIGGRF 39 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTTS
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCCCcee
Confidence 899999999999999999999 99999999998888765
No 92
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.11 E-value=1.9e-10 Score=107.27 Aligned_cols=117 Identities=11% Similarity=0.214 Sum_probs=78.0
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC----CCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEE
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV----SPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVV 165 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~----~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~ 165 (356)
.+||+|||||++|+++|+.|++. |++|+|+|+.. .+||.......... + ..++.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~vie~~~~~~~~~gg~~~~~~~~~~------------------~---~~~~~ 79 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARA-EIKPILYEGMMANGIAAGGQLTTTTEIEN------------------F---PGFPD 79 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCCEEECCSSBTTBCTTCGGGGSSEECC------------------S---TTCTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEecCCCCCCCcCcccccchhhcc------------------c---CCCcc
Confidence 58999999999999999999999 99999999954 44443221110000 0 00111
Q ss_pred EechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 166 IKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 166 ~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
.....++...+.+.+. +.|+++++++ |+++..+++.+. +.+.. . .+..++.+|.||+|+|...
T Consensus 80 ~~~~~~~~~~~~~~~~-~~gv~i~~~~-v~~i~~~~~~~~-v~~~~------~-----~~~~~~~~d~vvlAtG~~~ 142 (338)
T 3itj_A 80 GLTGSELMDRMREQST-KFGTEIITET-VSKVDLSSKPFK-LWTEF------N-----EDAEPVTTDAIILATGASA 142 (338)
T ss_dssp CEEHHHHHHHHHHHHH-HTTCEEECSC-EEEEECSSSSEE-EEETT------C-----SSSCCEEEEEEEECCCEEE
T ss_pred cCCHHHHHHHHHHHHH-HcCCEEEEeE-EEEEEEcCCEEE-EEEEe------c-----CCCcEEEeCEEEECcCCCc
Confidence 1234566666666665 5699999998 988887766543 22210 0 1246789999999999754
No 93
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.11 E-value=9.1e-11 Score=115.59 Aligned_cols=134 Identities=17% Similarity=0.196 Sum_probs=82.8
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccch-HHHHHHHhCCCccccCCeEEE-e
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKP-AHIFLDELGIDYDEQDNYVVI-K 167 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~-~~~~l~~~G~~~~~~~~~~~~-~ 167 (356)
+|||+|||||++|+++|+.|++. |++|+||||...+||.|.+.+|++.+.+.... ..+.+.++.. +....+|... .
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~-G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~-~~~~~~~~~~~~ 81 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKA-KYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIAN-VKIPLDFSTVQD 81 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHC-SCCCCCHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhC-CCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhccc-CCCCcCHHHHHH
Confidence 59999999999999999999999 99999999888999988888888776654432 2222222211 1111111100 0
Q ss_pred chHHHHH----HHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 168 HAALFTS----TIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 168 ~~~~~~~----~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
....+.+ ..+....++.+++++.+ ++..+. .+.+ .+...+ ++..++.+|+||+|||..
T Consensus 82 ~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id--~~~~-~V~~~~------------g~~~~~~~d~lviAtG~~ 143 (466)
T 3l8k_A 82 RKDYVQELRFKQHKRNMSQYETLTFYKG-YVKIKD--PTHV-IVKTDE------------GKEIEAETRYMIIASGAE 143 (466)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEEE--TTEE-EEEETT------------SCEEEEEEEEEEECCCEE
T ss_pred HHHhheeccccchHHHHHHhCCCEEEEe-EEEEec--CCeE-EEEcCC------------CcEEEEecCEEEECCCCC
Confidence 1111111 22334445779999888 555543 3332 233321 112339999999999964
No 94
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.10 E-value=4.6e-10 Score=115.42 Aligned_cols=104 Identities=21% Similarity=0.302 Sum_probs=66.5
Q ss_pred cccEEEECCCHHHHHHHHHhhc-----CCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCC--------
Q 018414 90 DTDVVVVGAGSAGLSCAYELSK-----NPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGID-------- 156 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~-----~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~-------- 156 (356)
++||+|||||++||++|+.|++ . |++|+||||...+..... + ........+.|+++|+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~-Gi~v~viE~~~~~~~~gr-a------~~l~~~tle~l~~lGl~~~l~~~~~ 79 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKP-DLKVRIIDKRSTKVYNGQ-A------DGLQCRTLESLKNLGLADKILSEAN 79 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHST-TCCEEEECSSSSCCCSCS-C------CEECHHHHHHHHTTTCHHHHHTTCB
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccC-CCCEEEEeCCCCCCCCCc-e------eEEChHHHHHHHHCCCHHHHHHhcc
Confidence 5899999999999999999999 8 999999999864421110 0 01111223333333321
Q ss_pred -c------ccc------------------CC-eEEEechHHHHHHHHHHHHcCC--CcEEEcCeEEEEEEEeC
Q 018414 157 -Y------DEQ------------------DN-YVVIKHAALFTSTIMSKLLARP--NVKLFNAVAAEDLIVKG 201 (356)
Q Consensus 157 -~------~~~------------------~~-~~~~~~~~~~~~~l~~~~~~~~--gv~i~~~~~v~~i~~~~ 201 (356)
. ... .. .....+...+.+.|++.+.+.. +++++++++++++..++
T Consensus 80 ~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~ 152 (665)
T 1pn0_A 80 DMSTIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDS 152 (665)
T ss_dssp CCCEEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECG
T ss_pred ccceEEEEeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecC
Confidence 0 000 00 1123455677777887776332 38999999999998865
No 95
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.10 E-value=3.3e-10 Score=105.69 Aligned_cols=114 Identities=19% Similarity=0.239 Sum_probs=75.6
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
.+||+|||||++|+++|+.|++. |++|+|+|+. .+||.+........ + ..++.....
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~-~~gg~~~~~~~~~~------------------~---~~~~~~~~~ 64 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRA-QLSTLILEKG-MPGGQIAWSEEVEN------------------F---PGFPEPIAG 64 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS-CTTGGGGGCSCBCC------------------S---TTCSSCBCH
T ss_pred cCCEEEECCCHHHHHHHHHHHHc-CCcEEEEeCC-CCCccccccccccc------------------C---CCCCCCCCH
Confidence 58999999999999999999999 9999999998 56654432211100 0 000001133
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEe--CCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVK--GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~--~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
..+...+.+.+. +.|+++++ .+|+++..+ ++....+... +..++++|+||+|||...
T Consensus 65 ~~~~~~l~~~~~-~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~--------------~g~~~~~~~vv~AtG~~~ 123 (325)
T 2q7v_A 65 MELAQRMHQQAE-KFGAKVEM-DEVQGVQHDATSHPYPFTVRG--------------YNGEYRAKAVILATGADP 123 (325)
T ss_dssp HHHHHHHHHHHH-HTTCEEEE-CCEEEEEECTTSSSCCEEEEE--------------SSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHH-HcCCEEEe-eeEEEEEeccCCCceEEEEEC--------------CCCEEEeCEEEECcCCCc
Confidence 556666666655 56999987 488888776 4321122222 135799999999999753
No 96
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.10 E-value=6.8e-10 Score=102.73 Aligned_cols=112 Identities=21% Similarity=0.307 Sum_probs=77.1
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
|||+|||||++|+++|+.|++. |+ +|+|+|+. .+||.+........ + ..++.....
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-g~~~v~lie~~-~~gg~~~~~~~~~~------------------~---~~~~~~~~~ 58 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG-GVKNAVLFEKG-MPGGQITGSSEIEN------------------Y---PGVKEVVSG 58 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCSSEEEECSS-STTCGGGGCSCBCC------------------S---TTCCSCBCH
T ss_pred ceEEEECccHHHHHHHHHHHHC-CCCcEEEEcCC-CCCccccccccccc------------------C---CCCcccCCH
Confidence 7999999999999999999999 99 99999996 45554432211100 0 001111234
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
..+...+.+.+. +.|+++++ ++|+++..+++.+. +... +..++++|.||+|||...
T Consensus 59 ~~~~~~l~~~~~-~~~v~~~~-~~v~~i~~~~~~~~-v~~~--------------~g~~~~~~~vv~AtG~~~ 114 (311)
T 2q0l_A 59 LDFMQPWQEQCF-RFGLKHEM-TAVQRVSKKDSHFV-ILAE--------------DGKTFEAKSVIIATGGSP 114 (311)
T ss_dssp HHHHHHHHHHHH-TTSCEEEC-SCEEEEEEETTEEE-EEET--------------TSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHH-HcCCEEEE-EEEEEEEEcCCEEE-EEEc--------------CCCEEECCEEEECCCCCC
Confidence 566666666665 67999998 68999988776433 3232 135799999999999654
No 97
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.08 E-value=7e-10 Score=109.74 Aligned_cols=132 Identities=17% Similarity=0.207 Sum_probs=82.4
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchH----HHHHHHhCCCcccc-CCe
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPA----HIFLDELGIDYDEQ-DNY 163 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~----~~~l~~~G~~~~~~-~~~ 163 (356)
.+|||+|||||++|+++|+.|++. |++|+|||| ..+||.|.+.+|++.+.+..... ...+..+|+.+... .+|
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~-G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 102 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGAL-GKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNW 102 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-cCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCH
Confidence 369999999999999999999999 999999999 57888888888887766554321 22333455543221 011
Q ss_pred EE-Eech----HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcC
Q 018414 164 VV-IKHA----ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSC 238 (356)
Q Consensus 164 ~~-~~~~----~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~At 238 (356)
.. .... ..+...+...+ ++.+++++.+ .+..+ +... +.+.. +...+.++.+|+||
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~g-~~~~i--~~~~---v~v~~-------------~~~~~~~d~lviAt 162 (484)
T 3o0h_A 103 EKLVAAKNKEISRLEGLYREGL-QNSNVHIYES-RAVFV--DEHT---LELSV-------------TGERISAEKILIAT 162 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHTTCEEEES-CEEEE--ETTE---EEETT-------------TCCEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HhCCCEEEEe-EEEEe--eCCE---EEEec-------------CCeEEEeCEEEEcc
Confidence 00 0001 12222222333 3579999888 33333 2332 22210 13679999999999
Q ss_pred CCCC
Q 018414 239 GHDG 242 (356)
Q Consensus 239 Gg~~ 242 (356)
|...
T Consensus 163 G~~p 166 (484)
T 3o0h_A 163 GAKI 166 (484)
T ss_dssp CEEE
T ss_pred CCCc
Confidence 9643
No 98
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.07 E-value=6.5e-10 Score=104.65 Aligned_cols=130 Identities=13% Similarity=0.156 Sum_probs=78.4
Q ss_pred ccEEEECCCHHHHHHHHHhhc---CCCCeEEEEeccCCCCCcccc------CCccchh---hh-ccc-------hHHHHH
Q 018414 91 TDVVVVGAGSAGLSCAYELSK---NPNIQIAIIEQSVSPGGGAWL------GGQLFSA---MV-VRK-------PAHIFL 150 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~---~~G~~V~llEk~~~~Gg~~~~------~g~~~~~---~~-~~~-------~~~~~l 150 (356)
+||+|||||++|+++|+.|++ . |++|+|+||...+||.... .+..+.. .+ ... ...+.+
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~-G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~ 80 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSG-PLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDEL 80 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-C-CEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccC-CceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHH
Confidence 599999999999999999999 8 9999999999877764211 0001100 00 001 112223
Q ss_pred HHhCCCcccc---------CC---eEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeeccc
Q 018414 151 DELGIDYDEQ---------DN---YVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNH 218 (356)
Q Consensus 151 ~~~G~~~~~~---------~~---~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~ 218 (356)
...|+..... .. |........+.+.|.+. .|++++++++|++|..+++++. +.+.+
T Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~----~g~~i~~~~~V~~i~~~~~~~~-v~~~~------- 148 (342)
T 3qj4_A 81 LAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKE----SGAEVYFRHRVTQINLRDDKWE-VSKQT------- 148 (342)
T ss_dssp HHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHH----HTCEEESSCCEEEEEECSSSEE-EEESS-------
T ss_pred HhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHh----cCCEEEeCCEEEEEEEcCCEEE-EEECC-------
Confidence 2334321110 00 11111223444444433 3899999999999998877654 44431
Q ss_pred CCCCCCCCeEEEcCEEEEcCCC
Q 018414 219 DTQSCMDPNVMEAKVVVSSCGH 240 (356)
Q Consensus 219 ~~~~~g~~~~i~Ak~VI~AtGg 240 (356)
+.++++|.||+|+..
T Consensus 149 -------g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 149 -------GSPEQFDLIVLTMPV 163 (342)
T ss_dssp -------SCCEEESEEEECSCH
T ss_pred -------CCEEEcCEEEECCCH
Confidence 244799999999984
No 99
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.07 E-value=1.2e-09 Score=101.58 Aligned_cols=111 Identities=23% Similarity=0.276 Sum_probs=76.2
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
++||+|||||++|+++|+.|++. |++|+|+|+. .+||.+.....+.. + ..+ .....
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~-~~gg~~~~~~~~~~------------------~---~~~-~~~~~ 71 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARS-GFSVAILDKA-VAGGLTAEAPLVEN------------------Y---LGF-KSIVG 71 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS-STTGGGGGCSCBCC------------------B---TTB-SSBCH
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-CCcEEEEeCC-CCCccccccchhhh------------------c---CCC-cccCH
Confidence 58999999999999999999999 9999999995 45554332211100 0 001 01123
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
..+...+.+.+. +.|+++++ .+++++..+++.+. +.+. ..++.+|+||+|+|...
T Consensus 72 ~~~~~~~~~~~~-~~~v~~~~-~~v~~i~~~~~~~~-v~~~---------------~~~~~~~~li~AtG~~~ 126 (319)
T 3cty_A 72 SELAKLFADHAA-NYAKIREG-VEVRSIKKTQGGFD-IETN---------------DDTYHAKYVIITTGTTH 126 (319)
T ss_dssp HHHHHHHHHHHH-TTSEEEET-CCEEEEEEETTEEE-EEES---------------SSEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHH-HcCCEEEE-eeEEEEEEeCCEEE-EEEC---------------CCEEEeCEEEECCCCCc
Confidence 455666666665 67999988 58999987766443 3332 25689999999999643
No 100
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.07 E-value=2.5e-10 Score=106.76 Aligned_cols=113 Identities=15% Similarity=0.210 Sum_probs=75.3
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEec----cCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEE
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQ----SVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVV 165 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk----~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~ 165 (356)
.+||+|||||++|+++|+.|++. |++|+|+|+ ....|+......... ....++.
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~-g~~v~lie~~~~~~~~~gg~~~~~~~~~---------------------~~~~~~~ 65 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARA-ELKPLLFEGWMANDIAPGGQLTTTTDVE---------------------NFPGFPE 65 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCCEEECCSSBTTBCTTCGGGGCSEEC---------------------CSTTCTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCeEEEEeccCccccCCCceeeeccccc---------------------cCCCCcc
Confidence 58999999999999999999999 999999998 334444322111000 0000100
Q ss_pred EechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 166 IKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 166 ~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
......+...+.+.+. +.|+++++++ |+++..+++.+. +.++ ..+++++.||+|||...
T Consensus 66 ~~~~~~~~~~l~~~~~-~~gv~~~~~~-v~~i~~~~~~~~-v~~~---------------~~~~~~~~vv~A~G~~~ 124 (333)
T 1vdc_A 66 GILGVELTDKFRKQSE-RFGTTIFTET-VTKVDFSSKPFK-LFTD---------------SKAILADAVILAIGAVA 124 (333)
T ss_dssp CEEHHHHHHHHHHHHH-HTTCEEECCC-CCEEECSSSSEE-EECS---------------SEEEEEEEEEECCCEEE
T ss_pred CCCHHHHHHHHHHHHH-HCCCEEEEeE-EEEEEEcCCEEE-EEEC---------------CcEEEcCEEEECCCCCc
Confidence 1134566666666665 5689999986 888876655432 2221 36799999999999764
No 101
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.06 E-value=9.6e-10 Score=110.55 Aligned_cols=130 Identities=18% Similarity=0.155 Sum_probs=83.3
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccC---Cc---cchhhhccchHHHHHHHhCCCccccCCe
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLG---GQ---LFSAMVVRKPAHIFLDELGIDYDEQDNY 163 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~---g~---~~~~~~~~~~~~~~l~~~G~~~~~~~~~ 163 (356)
++||+|||||++|+.+|+.|++. |++|+|||+...+||.+... |+ .....+...-..+....+.+. ..
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~-G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~----~~- 94 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQ-GLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWS----EK- 94 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCS----SS-
T ss_pred CCCEEEECchHHHHHHHHHHHhC-CCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCc----cC-
Confidence 58999999999999999999998 99999999998888754321 11 111111111011111222211 11
Q ss_pred EEEechHHHHHHHHHHHHcCCCc--EEEcCeEEEEEEEeCC-eEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCC
Q 018414 164 VVIKHAALFTSTIMSKLLARPNV--KLFNAVAAEDLIVKGG-RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGH 240 (356)
Q Consensus 164 ~~~~~~~~~~~~l~~~~~~~~gv--~i~~~~~v~~i~~~~~-~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg 240 (356)
.....++...+.+.+. +.++ +++++++|+++..+++ ..+.|.+.+ +.++++|+||+|||.
T Consensus 95 --~~~~~ei~~yl~~~~~-~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~--------------G~~i~ad~lV~AtG~ 157 (549)
T 4ap3_A 95 --YATQPEILAYLEHVAD-RFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDR--------------GDEVSARFLVVAAGP 157 (549)
T ss_dssp --SCBHHHHHHHHHHHHH-HTTCGGGEECSCCEEEEEEETTTTEEEEEETT--------------CCEEEEEEEEECCCS
T ss_pred --CCCHHHHHHHHHHHHH-HcCCCccEEECCEEEEEEEcCCCCEEEEEECC--------------CCEEEeCEEEECcCC
Confidence 1234555555554444 5576 7999999999998764 234455532 357999999999996
Q ss_pred CC
Q 018414 241 DG 242 (356)
Q Consensus 241 ~~ 242 (356)
.+
T Consensus 158 ~s 159 (549)
T 4ap3_A 158 LS 159 (549)
T ss_dssp EE
T ss_pred CC
Confidence 44
No 102
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.06 E-value=1.3e-09 Score=99.80 Aligned_cols=110 Identities=18% Similarity=0.205 Sum_probs=75.0
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
+||+|||||++|+++|+.|++. |++|+|+|+....+ ..+.... + +.... .....
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~~~~-~~~~~~~------------------~--~~~~~----~~~~~ 56 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRA-RKNILLVDAGERRN-RFASHSH------------------G--FLGQD----GKAPG 56 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCCGG-GGCSCCC------------------S--STTCT----TCCHH
T ss_pred CCEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCccc-ccchhhc------------------C--CcCCC----CCCHH
Confidence 8999999999999999999999 99999999975321 1110000 0 00000 11335
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
++...+.+.+.+..+++++.. +|+.+..+++.+ .+.+. +..++.+|.||+|||...
T Consensus 57 ~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~~~~-~v~~~--------------~g~~~~~d~vviAtG~~~ 112 (297)
T 3fbs_A 57 EIIAEARRQIERYPTIHWVEG-RVTDAKGSFGEF-IVEID--------------GGRRETAGRLILAMGVTD 112 (297)
T ss_dssp HHHHHHHHHHTTCTTEEEEES-CEEEEEEETTEE-EEEET--------------TSCEEEEEEEEECCCCEE
T ss_pred HHHHHHHHHHHhcCCeEEEEe-EEEEEEEcCCeE-EEEEC--------------CCCEEEcCEEEECCCCCC
Confidence 666677777764458888765 899998877653 34443 135799999999999754
No 103
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.05 E-value=1.2e-10 Score=114.61 Aligned_cols=135 Identities=18% Similarity=0.232 Sum_probs=83.7
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccch-HHHH----HHHhCCCcccc-CCe
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKP-AHIF----LDELGIDYDEQ-DNY 163 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~-~~~~----l~~~G~~~~~~-~~~ 163 (356)
+|||+|||||++|+++|+.|++. |++|+|+|+.+.+||.+++.++++.+.+.... ..+. +..+|+.+... .++
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~-g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 84 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL-GFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDL 84 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 58999999999999999999999 99999999998899988877777665443321 1122 34456543211 011
Q ss_pred EE-EechHH----HHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcC
Q 018414 164 VV-IKHAAL----FTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSC 238 (356)
Q Consensus 164 ~~-~~~~~~----~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~At 238 (356)
.. ..+... +...+.+.+ ++.|++++.++.+. .+.+.+. +... +++..++++|.||+||
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~-~~~gv~~~~g~~~~---~~~~~~~-v~~~------------~G~~~~i~~d~lIiAt 147 (470)
T 1dxl_A 85 AAMMGQKDKAVSNLTRGIEGLF-KKNKVTYVKGYGKF---VSPSEIS-VDTI------------EGENTVVKGKHIIIAT 147 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHHTCEEEESCEEE---EETTEEE-ECCS------------SSCCEEEECSEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HhCCCEEEEeEEEE---ecCCEEE-EEeC------------CCceEEEEcCEEEECC
Confidence 00 001111 112222333 35689999997553 3444322 2111 1122679999999999
Q ss_pred CCCC
Q 018414 239 GHDG 242 (356)
Q Consensus 239 Gg~~ 242 (356)
|...
T Consensus 148 Gs~p 151 (470)
T 1dxl_A 148 GSDV 151 (470)
T ss_dssp CEEE
T ss_pred CCCC
Confidence 9654
No 104
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.05 E-value=3.2e-10 Score=111.99 Aligned_cols=132 Identities=17% Similarity=0.228 Sum_probs=80.3
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchH-HHHH---HHhCCCcccc-CCe
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPA-HIFL---DELGIDYDEQ-DNY 163 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~-~~~l---~~~G~~~~~~-~~~ 163 (356)
.+|||+|||||++|+++|+.|++. |++|+|||+. ..||.|++.+|++.+.+..... .+.+ ..+|+..... ..|
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~-G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 96 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAEL-GARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNW 96 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT-TCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCH
Confidence 469999999999999999999999 9999999987 6888888888887766554322 1222 2234332211 011
Q ss_pred EE-EechH----HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcC
Q 018414 164 VV-IKHAA----LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSC 238 (356)
Q Consensus 164 ~~-~~~~~----~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~At 238 (356)
.. ..+.. .+...+...+ +..+++++.++ +..+ +.+. ..+.. +..++++|+||+||
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~-~~~gv~~~~g~-~~~~--~~~~-~~v~~---------------~g~~~~~d~lviAt 156 (478)
T 3dk9_A 97 RVIKEKRDAYVSRLNAIYQNNL-TKSHIEIIRGH-AAFT--SDPK-PTIEV---------------SGKKYTAPHILIAT 156 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHTTCEEEESC-EEEC--SCSS-CEEEE---------------TTEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HhCCcEEEEeE-EEEe--eCCe-EEEEE---------------CCEEEEeeEEEEcc
Confidence 10 00111 1222222223 35689998884 2222 2111 11222 13679999999999
Q ss_pred CCCC
Q 018414 239 GHDG 242 (356)
Q Consensus 239 Gg~~ 242 (356)
|+..
T Consensus 157 G~~p 160 (478)
T 3dk9_A 157 GGMP 160 (478)
T ss_dssp CEEE
T ss_pred CCCC
Confidence 9643
No 105
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.05 E-value=9e-10 Score=93.93 Aligned_cols=109 Identities=20% Similarity=0.230 Sum_probs=74.2
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
|||+|||||++|+.+|..|++. |.+|+|+|+.+..-.... ... .. .+++ ......
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-g~~v~lie~~~~~~~~~~----~~~----~~--------~~~~--------~~~~~~ 56 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-GLKVLVLDGGRSKVKGVS----RVP----NY--------PGLL--------DEPSGE 56 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSCCTTTTCS----CCC----CS--------TTCT--------TCCCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCCCcccCch----hhh----cc--------CCCc--------CCCCHH
Confidence 7999999999999999999999 999999999852111000 000 00 0000 001245
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
.+.+.+.+.+. +.|++++++ +|+++..+++.+ .+.+. +. ++.+|.||+|+|..+
T Consensus 57 ~~~~~l~~~~~-~~gv~v~~~-~v~~i~~~~~~~-~v~~~--------------~g-~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 57 ELLRRLEAHAR-RYGAEVRPG-VVKGVRDMGGVF-EVETE--------------EG-VEKAERLLLCTHKDP 110 (180)
T ss_dssp HHHHHHHHHHH-HTTCEEEEC-CCCEEEECSSSE-EEECS--------------SC-EEEEEEEEECCTTCC
T ss_pred HHHHHHHHHHH-HcCCEEEeC-EEEEEEEcCCEE-EEEEC--------------CC-EEEECEEEECCCCCC
Confidence 66666666665 579999999 999998766543 23332 12 799999999999664
No 106
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.05 E-value=9.3e-11 Score=115.51 Aligned_cols=129 Identities=16% Similarity=0.228 Sum_probs=79.4
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccch-HHH---HHHHhCCCcccc-CCeE
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKP-AHI---FLDELGIDYDEQ-DNYV 164 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~-~~~---~l~~~G~~~~~~-~~~~ 164 (356)
+|||+|||||++|+++|+.|++. |++|+|+|+.. .||.|.+.++++.+.+.... ..+ .+..+|+. ... .++.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~-g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~-~~~~~~~~ 82 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQL-GLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLK-AKPELDLK 82 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEE-CCCEECHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCC-CCCCcCHH
Confidence 59999999999999999999999 99999999986 78877777777765544322 112 22234443 100 0010
Q ss_pred E-EechHHHHHHH---HHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCC
Q 018414 165 V-IKHAALFTSTI---MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGH 240 (356)
Q Consensus 165 ~-~~~~~~~~~~l---~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg 240 (356)
. ..+...+.+.+ +....++.|++++.++.+. .+... +.+. ..++++|+||+|||.
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~~---v~v~---------------g~~~~~d~lViATGs 141 (464)
T 2eq6_A 83 KLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARL---VGPKE---VEVG---------------GERYGAKSLILATGS 141 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEE---EETTE---EEET---------------TEEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEE---ccCCE---EEEc---------------cEEEEeCEEEEcCCC
Confidence 0 00111222222 2222335799999986442 23332 2221 256899999999996
Q ss_pred CC
Q 018414 241 DG 242 (356)
Q Consensus 241 ~~ 242 (356)
..
T Consensus 142 ~p 143 (464)
T 2eq6_A 142 EP 143 (464)
T ss_dssp EE
T ss_pred CC
Confidence 54
No 107
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.04 E-value=5.2e-10 Score=105.96 Aligned_cols=131 Identities=14% Similarity=0.187 Sum_probs=78.0
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCC-ccc--cCCe--
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGID-YDE--QDNY-- 163 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~-~~~--~~~~-- 163 (356)
++||+|||||++|+++|+.|++. |. +|+|||+.. +|+.+....... ..+.... ....+|+. +.. ...+
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~-g~~~v~lie~~~-~Gg~~~~~~~~~-~~~~~~~---~~~~~g~~~~~~~~~~~~~~ 77 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDF-GITDVIILEKGT-VGHSFKHWPKST-RTITPSF---TSNGFGMPDMNAISMDTSPA 77 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSS-TTHHHHTSCTTC-BCSSCCC---CCGGGTCCCTTCSSTTCCHH
T ss_pred cCcEEEECcCHHHHHHHHHHHHc-CCCcEEEEecCC-CCCccccCcccc-cccCcch---hcccCCchhhhhcccccccc
Confidence 48999999999999999999999 99 999999987 665432111000 0000000 00011220 000 0000
Q ss_pred ----EEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCC
Q 018414 164 ----VVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCG 239 (356)
Q Consensus 164 ----~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtG 239 (356)
........+...+.+.+. +.|++++++++|+++..+++.+. +.+. ..++.+|.||+|+|
T Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~-~~gv~i~~~~~v~~i~~~~~~~~-v~~~---------------~g~~~~d~vVlAtG 140 (369)
T 3d1c_A 78 FTFNEEHISGETYAEYLQVVAN-HYELNIFENTVVTNISADDAYYT-IATT---------------TETYHADYIFVATG 140 (369)
T ss_dssp HHHCCSSCBHHHHHHHHHHHHH-HTTCEEECSCCEEEEEECSSSEE-EEES---------------SCCEEEEEEEECCC
T ss_pred ccccccCCCHHHHHHHHHHHHH-HcCCeEEeCCEEEEEEECCCeEE-EEeC---------------CCEEEeCEEEECCC
Confidence 001123445555544444 57999999999999987655432 3332 12588999999999
Q ss_pred CCCC
Q 018414 240 HDGP 243 (356)
Q Consensus 240 g~~~ 243 (356)
++..
T Consensus 141 ~~~~ 144 (369)
T 3d1c_A 141 DYNF 144 (369)
T ss_dssp STTS
T ss_pred CCCc
Confidence 8753
No 108
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.03 E-value=1.7e-10 Score=113.63 Aligned_cols=134 Identities=16% Similarity=0.177 Sum_probs=83.2
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccch-HHHH----HHHhCCCcccc--CC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKP-AHIF----LDELGIDYDEQ--DN 162 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~-~~~~----l~~~G~~~~~~--~~ 162 (356)
+|||+|||||++|+++|+.|++. |++|+|||+.+.+||.|.+.++++.+.+.... ..++ +..+|+++... .+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 80 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQL-GMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMD 80 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccC
Confidence 48999999999999999999999 99999999998899888777777765544321 1222 44566653111 01
Q ss_pred eEE-EechHH----HHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEc
Q 018414 163 YVV-IKHAAL----FTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSS 237 (356)
Q Consensus 163 ~~~-~~~~~~----~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~A 237 (356)
+.. ..+... +...+.+.+ ++.|++++.++.+. .+.+.+. +...+ ++..++++|+||+|
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~-~~~~v~~~~g~~~~---i~~~~~~-v~~~~------------G~~~~~~~d~lviA 143 (468)
T 2qae_A 81 SAKMQQQKERAVKGLTGGVEYLF-KKNKVTYYKGEGSF---ETAHSIR-VNGLD------------GKQEMLETKKTIIA 143 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-HHHTCEEEEEEEEE---EETTEEE-EEETT------------SCEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HhCCCEEEEEEEEE---eeCCEEE-EEecC------------CceEEEEcCEEEEC
Confidence 100 001111 112222333 35689999886442 3444332 32221 11267999999999
Q ss_pred CCCC
Q 018414 238 CGHD 241 (356)
Q Consensus 238 tGg~ 241 (356)
||..
T Consensus 144 tG~~ 147 (468)
T 2qae_A 144 TGSE 147 (468)
T ss_dssp CCEE
T ss_pred CCCC
Confidence 9964
No 109
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.03 E-value=7.5e-09 Score=100.19 Aligned_cols=56 Identities=20% Similarity=0.179 Sum_probs=43.1
Q ss_pred HHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 172 FTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 172 ~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
+.+.+.+.+. +.|+++++++.|+++..+++++.++.+.+ +.++.+|.||+|+|...
T Consensus 196 ~~~~l~~~l~-~~GV~i~~~~~v~~i~~~~~~v~~v~l~d--------------G~~i~aD~Vv~a~G~~p 251 (415)
T 3lxd_A 196 LSEFYQAEHR-AHGVDLRTGAAMDCIEGDGTKVTGVRMQD--------------GSVIPADIVIVGIGIVP 251 (415)
T ss_dssp HHHHHHHHHH-HTTCEEEETCCEEEEEESSSBEEEEEESS--------------SCEEECSEEEECSCCEE
T ss_pred HHHHHHHHHH-hCCCEEEECCEEEEEEecCCcEEEEEeCC--------------CCEEEcCEEEECCCCcc
Confidence 3344444444 67999999999999998888888887753 36799999999999543
No 110
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.02 E-value=2.3e-09 Score=107.55 Aligned_cols=130 Identities=19% Similarity=0.176 Sum_probs=80.7
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhh-------ccchHHHHHHHhCCCccccCC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMV-------VRKPAHIFLDELGIDYDEQDN 162 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~-------~~~~~~~~l~~~G~~~~~~~~ 162 (356)
++||+|||||++|+++|+.|++. |++|+|+|+...+||.+. .++++...+ ...-..+.+..+.+. ..
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~-G~~v~iiE~~~~~GG~w~-~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~----~~ 89 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLREL-GRSVHVIETAGDVGGVWY-WNRYPGARCDIESIEYCYSFSEEVLQEWNWT----ER 89 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTHHH-HCCCTTCBCSSCTTTSSCCSCHHHHHHCCCC----BS
T ss_pred CCCEEEECccHHHHHHHHHHHhC-CCCEEEEeCCCCCCCccc-ccCCCceeecccccccccccChhhhhccCcc----cc
Confidence 58999999999999999999999 999999999988876542 111111000 000001111122111 01
Q ss_pred eEEEechHHHHHHHHHHHHcCC--CcEEEcCeEEEEEEEeCC-eEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCC
Q 018414 163 YVVIKHAALFTSTIMSKLLARP--NVKLFNAVAAEDLIVKGG-RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCG 239 (356)
Q Consensus 163 ~~~~~~~~~~~~~l~~~~~~~~--gv~i~~~~~v~~i~~~~~-~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtG 239 (356)
+ ....++.+.+...+. +. +.+++++++|+++..+++ ..+.|.+.+ +.+++||+||+|+|
T Consensus 90 ~---~~~~~i~~yl~~~~~-~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~--------------G~~~~ad~vV~AtG 151 (542)
T 1w4x_A 90 Y---ASQPEILRYINFVAD-KFDLRSGITFHTTVTAAAFDEATNTWTVDTNH--------------GDRIRARYLIMASG 151 (542)
T ss_dssp S---CBHHHHHHHHHHHHH-HTTGGGGEECSCCEEEEEEETTTTEEEEEETT--------------CCEEEEEEEEECCC
T ss_pred c---CCHHHHHHHHHHHHH-HcCCCceEEcCcEEEEEEEcCCCCeEEEEECC--------------CCEEEeCEEEECcC
Confidence 1 123444444433333 33 467999999999988753 333455432 35799999999999
Q ss_pred CCCC
Q 018414 240 HDGP 243 (356)
Q Consensus 240 g~~~ 243 (356)
..+.
T Consensus 152 ~~s~ 155 (542)
T 1w4x_A 152 QLSV 155 (542)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 7653
No 111
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.02 E-value=6.2e-10 Score=109.85 Aligned_cols=132 Identities=18% Similarity=0.257 Sum_probs=81.6
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccch-HHHHHH----HhCCCccccCCeE
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKP-AHIFLD----ELGIDYDEQDNYV 164 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~-~~~~l~----~~G~~~~~~~~~~ 164 (356)
+|||+|||||++|+++|+.|++. |++|+|+|+...+||.+.+.++++.+.+.... ..+.+. .+|+++. .. .
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~-G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~--~~-~ 80 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQL-GFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVN--GD-I 80 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEEC--SC-E
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccC--CC-C
Confidence 58999999999999999999999 99999999988888888777776655443321 122222 2344321 00 1
Q ss_pred EEec------hH----HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeE------
Q 018414 165 VIKH------AA----LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNV------ 228 (356)
Q Consensus 165 ~~~~------~~----~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~------ 228 (356)
.... .. .+...+.+.+. +.|++++.++.+.. +++.+ .+...+ ++..+
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~gv~~~~g~~~~~---~~~~v-~V~~~~------------G~~~~~~~~~~ 143 (478)
T 1v59_A 81 KINVANFQKAKDDAVKQLTGGIELLFK-KNKVTYYKGNGSFE---DETKI-RVTPVD------------GLEGTVKEDHI 143 (478)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHH-HTTCEEEESEEEES---SSSEE-EEECCT------------TCTTCCSSCEE
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHH-hCCCEEEEEEEEEc---cCCeE-EEEecC------------CCcccccccce
Confidence 1111 01 11122333333 57999999976541 33332 232211 11134
Q ss_pred EEcCEEEEcCCCCC
Q 018414 229 MEAKVVVSSCGHDG 242 (356)
Q Consensus 229 i~Ak~VI~AtGg~~ 242 (356)
+++|+||+|||+..
T Consensus 144 i~~d~lViAtGs~p 157 (478)
T 1v59_A 144 LDVKNIIVATGSEV 157 (478)
T ss_dssp EEEEEEEECCCEEE
T ss_pred EEeCEEEECcCCCC
Confidence 99999999999754
No 112
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.02 E-value=1.8e-09 Score=105.85 Aligned_cols=133 Identities=21% Similarity=0.259 Sum_probs=80.8
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccch-HHH---HHHHhCCCcccc-CCeE
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKP-AHI---FLDELGIDYDEQ-DNYV 164 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~-~~~---~l~~~G~~~~~~-~~~~ 164 (356)
+|||+|||||++|+++|+.|++. |++|+|+|+. ..||.+.+.++++.+.+.... ..+ ++..+|+.+... .++.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 80 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQL-GQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFA 80 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT-TCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHH
Confidence 48999999999999999999999 9999999998 678777666776655443321 111 222334432110 0000
Q ss_pred E-EechHH----HHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCC
Q 018414 165 V-IKHAAL----FTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCG 239 (356)
Q Consensus 165 ~-~~~~~~----~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtG 239 (356)
. ..+... +.+.+.+.+ ++.|++++.++.+. .+.+.+. +...+ + ..++++|+||+|||
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~-~~~gv~~~~g~~~~---id~~~v~-V~~~~------------G-~~~i~~d~lViATG 142 (455)
T 1ebd_A 81 KVQEWKASVVKKLTGGVEGLL-KGNKVEIVKGEAYF---VDANTVR-VVNGD------------S-AQTYTFKNAIIATG 142 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HTTTCEEEESEEEE---EETTEEE-EEETT------------E-EEEEECSEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhCCCEEEEEEEEE---ccCCeEE-EEeCC------------C-cEEEEeCEEEEecC
Confidence 0 001111 222233334 46799999997543 3444432 33221 0 15689999999999
Q ss_pred CCC
Q 018414 240 HDG 242 (356)
Q Consensus 240 g~~ 242 (356)
+..
T Consensus 143 s~p 145 (455)
T 1ebd_A 143 SRP 145 (455)
T ss_dssp EEE
T ss_pred CCC
Confidence 654
No 113
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.02 E-value=1.8e-10 Score=113.63 Aligned_cols=135 Identities=19% Similarity=0.213 Sum_probs=82.6
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchH----HH--HHHHhCCCcccc-CC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPA----HI--FLDELGIDYDEQ-DN 162 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~----~~--~l~~~G~~~~~~-~~ 162 (356)
+|||+|||||++|+++|+.|++. |++|+|||+.+.+||.+.+.++++.+.+..... .. .+..+|++.... .+
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQL-GFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLN 84 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccC
Confidence 58999999999999999999999 999999999988998887777777655443211 11 334455542110 00
Q ss_pred eEE-EechHHHHH----HHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEc
Q 018414 163 YVV-IKHAALFTS----TIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSS 237 (356)
Q Consensus 163 ~~~-~~~~~~~~~----~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~A 237 (356)
+.. ..+...+.. .+.+.+ ++.|++++.++.+ .+ +.+.+. +...+ +...++++|+||+|
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~~-~~~gv~~~~g~~~-~~--~~~~~~-v~~~~------------gg~~~~~~d~lViA 147 (474)
T 1zmd_A 85 LDKMMEQKSTAVKALTGGIAHLF-KQNKVVHVNGYGK-IT--GKNQVT-ATKAD------------GGTQVIDTKNILIA 147 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-HHTTCEEEESEEE-EE--ETTEEE-EECTT------------SCEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HhCCCEEEEEEEE-Ee--cCCEEE-EEecC------------CCcEEEEeCEEEEC
Confidence 000 000111111 222333 3579999998643 22 444332 22211 01257999999999
Q ss_pred CCCCC
Q 018414 238 CGHDG 242 (356)
Q Consensus 238 tGg~~ 242 (356)
||...
T Consensus 148 tGs~p 152 (474)
T 1zmd_A 148 TGSEV 152 (474)
T ss_dssp CCEEE
T ss_pred CCCCC
Confidence 99653
No 114
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.01 E-value=9.9e-10 Score=103.02 Aligned_cols=113 Identities=20% Similarity=0.252 Sum_probs=73.7
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEec
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 168 (356)
..+||+|||||++|+++|+.|++. |++|+|+|+. .+||.+....... . ...++....
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~-~~gg~~~~~~~~~-----~----------------~~~~~~~~~ 69 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARA-QLAPLVFEGT-SFGGALMTTTDVE-----N----------------YPGFRNGIT 69 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHT-TCCCEEECCS-SCSCGGGSCSCBC-----C----------------STTCTTCBC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEecC-CCCCceeccchhh-----h----------------cCCCCCCCC
Confidence 358999999999999999999999 9999999986 4555432211000 0 000100012
Q ss_pred hHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEE-EEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGV-VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv-~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
...+...+.+.+. +.|+++++++ ++++.. ++.+. + .+. +..++.+|+||+|||...
T Consensus 70 ~~~~~~~l~~~~~-~~~v~~~~~~-v~~i~~-~~~~~-v~~~~--------------~g~~~~~d~lviAtG~~~ 126 (335)
T 2a87_A 70 GPELMDEMREQAL-RFGADLRMED-VESVSL-HGPLK-SVVTA--------------DGQTHRARAVILAMGAAA 126 (335)
T ss_dssp HHHHHHHHHHHHH-HTTCEEECCC-EEEEEC-SSSSE-EEEET--------------TSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHH-HcCCEEEEee-EEEEEe-CCcEE-EEEeC--------------CCCEEEeCEEEECCCCCc
Confidence 3455556555554 5699999986 888765 33221 2 232 135799999999999754
No 115
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.01 E-value=2e-09 Score=99.53 Aligned_cols=112 Identities=19% Similarity=0.280 Sum_probs=74.3
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
|||+|||||++|+++|+.|++. |++|+|+|+. .||.+.....+.. +. ... .....
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-g~~v~li~~~--~gG~~~~~~~~~~------------------~~---~~~-~~~~~ 56 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARK-GIRTGLMGER--FGGQILDTVDIEN------------------YI---SVP-KTEGQ 56 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTT-TCCEEEECSS--TTGGGGGCCEECC------------------BT---TBS-SEEHH
T ss_pred CCEEEECcCHHHHHHHHHHHHC-CCcEEEEeCC--CCceecccccccc------------------cc---CcC-CCCHH
Confidence 8999999999999999999999 9999999864 4443321111000 00 000 01234
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeC--CeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKG--GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
.+...+.+.+. +.|++++++++|+.+..++ +....+.+.+ ..++++|.||+|||...
T Consensus 57 ~~~~~~~~~~~-~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~--------------g~~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 57 KLAGALKVHVD-EYDVDVIDSQSASKLIPAAVEGGLHQIETAS--------------GAVLKARSIIVATGAKW 115 (310)
T ss_dssp HHHHHHHHHHH-TSCEEEECSCCEEEEECCSSTTCCEEEEETT--------------SCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHH-HcCCeEEccCEEEEEEecccCCceEEEEECC--------------CCEEEeCEEEECcCCCc
Confidence 55556555554 6799999999999987542 2223344431 35789999999999753
No 116
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.01 E-value=1.2e-09 Score=101.41 Aligned_cols=112 Identities=12% Similarity=0.155 Sum_probs=74.3
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
.+||+|||||++|+++|+.|++. |++|+|+|+. .+||.+....... ....++.....
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~-~~gg~~~~~~~~~---------------------~~~~~~~~~~~ 61 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARA-NLQPVLITGM-EKGGQLTTTTEVE---------------------NWPGDPNDLTG 61 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-TCCCEEECCS-STTGGGGGCSBCC---------------------CSTTCCSSCBH
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCcEEEEccC-CCCceEecchhhh---------------------hCCCCCCCCCH
Confidence 58999999999999999999999 9999999975 4555432211100 00001101123
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
..+...+.+.+. +.++++++++ ++.+..+++.+.. .. +..++.+|+||+|+|...
T Consensus 62 ~~~~~~~~~~~~-~~~~~~~~~~-v~~i~~~~~~~~v--~~--------------~~~~~~~~~lv~AtG~~~ 116 (320)
T 1trb_A 62 PLLMERMHEHAT-KFETEIIFDH-INKVDLQNRPFRL--NG--------------DNGEYTCDALIIATGASA 116 (320)
T ss_dssp HHHHHHHHHHHH-HTTCEEECCC-EEEEECSSSSEEE--EE--------------SSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHH-HCCCEEEEee-eeEEEecCCEEEE--Ee--------------CCCEEEcCEEEECCCCCc
Confidence 455555555554 5789999985 8888765554432 22 135789999999999754
No 117
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.00 E-value=1.2e-09 Score=100.91 Aligned_cols=111 Identities=20% Similarity=0.277 Sum_probs=74.3
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEE-EeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEec
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAI-IEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~l-lEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 168 (356)
.+||+|||||++|+++|+.|+++ |++|+| +|| ..+||.......+.. ...+.....
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~li~e~-~~~gG~~~~~~~~~~---------------------~~~~~~~~~ 60 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG-GLKNVVMFEK-GMPGGQITSSSEIEN---------------------YPGVAQVMD 60 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-TCSCEEEECS-SSTTGGGGGCSCBCC---------------------STTCCSCBC
T ss_pred CceEEEECCCHHHHHHHHHHHHC-CCCeEEEEeC-CCCCceeeeeceecc---------------------CCCCCCCCC
Confidence 48999999999999999999999 999999 999 456654322111100 000110123
Q ss_pred hHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeC--CeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG--GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
..++...+.+.+. +.+++++++ +|+++ .++ +.+. +.... +. ++.+|+||+|+|..
T Consensus 61 ~~~~~~~~~~~~~-~~~v~~~~~-~v~~i-~~~~~~~~~-v~~~~-------------~~-~~~~d~lvlAtG~~ 117 (315)
T 3r9u_A 61 GISFMAPWSEQCM-RFGLKHEMV-GVEQI-LKNSDGSFT-IKLEG-------------GK-TELAKAVIVCTGSA 117 (315)
T ss_dssp HHHHHHHHHHHHT-TTCCEEECC-CEEEE-EECTTSCEE-EEETT-------------SC-EEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHH-HcCcEEEEE-EEEEE-ecCCCCcEE-EEEec-------------CC-EEEeCEEEEeeCCC
Confidence 4566666555554 779999998 88888 665 4433 21221 13 79999999999964
No 118
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.99 E-value=7e-10 Score=112.02 Aligned_cols=51 Identities=22% Similarity=0.229 Sum_probs=40.6
Q ss_pred cCCCcEEEcCeEEEEEEEe--CCeEEEEEEcceeeecccCCCCCCCCeEEEc-CEEEEcCCCCC
Q 018414 182 ARPNVKLFNAVAAEDLIVK--GGRVGGVVTNWALVSMNHDTQSCMDPNVMEA-KVVVSSCGHDG 242 (356)
Q Consensus 182 ~~~gv~i~~~~~v~~i~~~--~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A-k~VI~AtGg~~ 242 (356)
++.|+++++++.|++|+++ +++++||.+.. . ++...+++| |-||+|+|+++
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~------~----~g~~~~v~A~keVILsaGa~~ 270 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEADRTCKGVTVVT------A----AGNELNFFADREVILSQGVFE 270 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTTTEEEEEEEEE------T----TSCEEEEEEEEEEEECSHHHH
T ss_pred cCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEe------C----CCcEEEEEeeeEEEEcccccC
Confidence 4679999999999999998 78999998752 1 123567888 57999999764
No 119
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.99 E-value=6.1e-10 Score=109.82 Aligned_cols=135 Identities=21% Similarity=0.281 Sum_probs=75.9
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCC------CccccCCccchhhhccchH-HHH----HHHhCCCcc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPG------GGAWLGGQLFSAMVVRKPA-HIF----LDELGIDYD 158 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~G------g~~~~~g~~~~~~~~~~~~-~~~----l~~~G~~~~ 158 (356)
+|||+|||||++|+++|+.|++. |++|+||||...+| |.|.+.+|++.+.+..... .+. +..+|+.+.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~-G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQL-GLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHH-TCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-CCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 59999999999999999999999 99999999987444 4444444555444333211 111 223343321
Q ss_pred cc-CCeEE-EechHHHHHHH---HHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCE
Q 018414 159 EQ-DNYVV-IKHAALFTSTI---MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKV 233 (356)
Q Consensus 159 ~~-~~~~~-~~~~~~~~~~l---~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~ 233 (356)
.. .+|.. ......+...+ ++...++.+++++.++.+. .+.+.+ .+... +++..++.+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~---~~~~~~-~v~~~------------~g~~~~~~~d~ 145 (476)
T 3lad_A 82 EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKL---LAGKKV-EVTAA------------DGSSQVLDTEN 145 (476)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEE---CSTTCE-EEECT------------TSCEEEECCSC
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ecCCEE-EEEcC------------CCceEEEEcCE
Confidence 10 01100 00111111111 2223335689999885332 233332 22221 11236799999
Q ss_pred EEEcCCCC
Q 018414 234 VVSSCGHD 241 (356)
Q Consensus 234 VI~AtGg~ 241 (356)
||+|||+.
T Consensus 146 lvlAtG~~ 153 (476)
T 3lad_A 146 VILASGSK 153 (476)
T ss_dssp EEECCCEE
T ss_pred EEEcCCCC
Confidence 99999964
No 120
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.99 E-value=9.3e-10 Score=108.40 Aligned_cols=139 Identities=17% Similarity=0.200 Sum_probs=81.5
Q ss_pred ccEEEECCCHHHHHHHHHhhc---CCCCe---EEEEeccCCCCCccccC---Ccc----------chhhhccchHHHHHH
Q 018414 91 TDVVVVGAGSAGLSCAYELSK---NPNIQ---IAIIEQSVSPGGGAWLG---GQL----------FSAMVVRKPAHIFLD 151 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~---~~G~~---V~llEk~~~~Gg~~~~~---g~~----------~~~~~~~~~~~~~l~ 151 (356)
+||+|||||++|+++|..|++ . |++ |+|+|+...+||.+... ++. +..+..+.. ...+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~-G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~-~~~~~ 80 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEK-GAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGP-KECLE 80 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHT-TCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSC-GGGTC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhc-CCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCC-hhhcc
Confidence 699999999999999999999 8 999 99999998887654321 111 100000000 00000
Q ss_pred HhCCCcccc--CCeEEEechHHHHHHHHHHHHcCCCcE--EEcCeEEEEEEEeCC--eEEEEEEcceeeecccCCCCCCC
Q 018414 152 ELGIDYDEQ--DNYVVIKHAALFTSTIMSKLLARPNVK--LFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMD 225 (356)
Q Consensus 152 ~~G~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~gv~--i~~~~~v~~i~~~~~--~v~gv~~~~~~~~~~~~~~~~g~ 225 (356)
-.++++... .....+.+...+.+.+.+.+. +.|++ ++++++|+.+..+++ .+ .|.+.+ .. +++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~gv~~~i~~~~~V~~v~~~~~~~~~-~V~~~~------~~---~g~ 149 (464)
T 2xve_A 81 FADYTFDEHFGKPIASYPPREVLWDYIKGRVE-KAGVRKYIRFNTAVRHVEFNEDSQTF-TVTVQD------HT---TDT 149 (464)
T ss_dssp BTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHH-HHTCGGGEECSEEEEEEEEETTTTEE-EEEEEE------TT---TTE
T ss_pred cCCCCCCcccCCCCCCCCCHHHHHHHHHHHHH-HcCCcceEEeCCEEEEEEEcCCCCcE-EEEEEE------cC---CCc
Confidence 001111100 000112244566666555554 45787 899999999988765 33 343321 00 012
Q ss_pred CeEEEcCEEEEcCCCCC
Q 018414 226 PNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 226 ~~~i~Ak~VI~AtGg~~ 242 (356)
..++.+|.||+|||+++
T Consensus 150 ~~~~~~d~VVvAtG~~s 166 (464)
T 2xve_A 150 IYSEEFDYVVCCTGHFS 166 (464)
T ss_dssp EEEEEESEEEECCCSSS
T ss_pred eEEEEcCEEEECCCCCC
Confidence 35789999999999765
No 121
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.99 E-value=6.6e-10 Score=109.20 Aligned_cols=130 Identities=17% Similarity=0.260 Sum_probs=81.3
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccch-HHHHHHH------hCCCcccc-C
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKP-AHIFLDE------LGIDYDEQ-D 161 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~-~~~~l~~------~G~~~~~~-~ 161 (356)
+|||+|||||++|+++|+.|++. |++|+|+|+ ...||.|++.+|++.+.+.... ..+.+.. +|+++... .
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 82 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQL-GIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPRL 82 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH-TCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCcc
Confidence 58999999999999999999999 999999999 5788888877777766544332 2222222 45543211 1
Q ss_pred CeEE-EechHHHHHHH---HHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEc
Q 018414 162 NYVV-IKHAALFTSTI---MSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSS 237 (356)
Q Consensus 162 ~~~~-~~~~~~~~~~l---~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~A 237 (356)
++.. ..+...+.+.+ ++...++.|++++.++.+. .++.. +.+. ..++.+|+||+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~---~~~~~---v~v~---------------~~~~~~d~lviA 141 (458)
T 1lvl_A 83 DIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKV---LDGKQ---VEVD---------------GQRIQCEHLLLA 141 (458)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEE---EETTE---EEET---------------TEEEECSEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEE---ccCCE---EEEe---------------eEEEEeCEEEEe
Confidence 1110 01111122221 2223346799999997543 23332 2222 156899999999
Q ss_pred CCCCC
Q 018414 238 CGHDG 242 (356)
Q Consensus 238 tGg~~ 242 (356)
||...
T Consensus 142 TGs~p 146 (458)
T 1lvl_A 142 TGSSS 146 (458)
T ss_dssp CCEEE
T ss_pred CCCCC
Confidence 99643
No 122
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.98 E-value=3.7e-10 Score=112.65 Aligned_cols=54 Identities=15% Similarity=0.162 Sum_probs=42.8
Q ss_pred HHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 178 SKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 178 ~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
.......|++++.++.|+.+..+++++++|.... . +....+.|+.||+|.|+.+
T Consensus 218 ~~~~~r~nl~v~~~~~v~~i~~~~~~a~gv~~~~-------~----~~~~~~~a~~VILsAGai~ 271 (526)
T 3t37_A 218 KAVRGRKNLTILTGSRVRRLKLEGNQVRSLEVVG-------R----QGSAEVFADQIVLCAGALE 271 (526)
T ss_dssp HHHHTCTTEEEECSCEEEEEEEETTEEEEEEEEE-------T----TEEEEEEEEEEEECSHHHH
T ss_pred ccccCCCCeEEEeCCEEEEEEecCCeEEEEEEEe-------c----CceEEEeecceEEcccccC
Confidence 3444578999999999999999999999988752 1 1246788999999999654
No 123
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.98 E-value=7.5e-10 Score=109.86 Aligned_cols=53 Identities=23% Similarity=0.382 Sum_probs=47.8
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRK 144 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~ 144 (356)
+|||+|||||++|+++|+.|++. |++|+|||++ .+||.|++.||++.+.+...
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~-G~~V~liE~~-~~GGtc~~~gciPsk~l~~~ 60 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKH-TDKVVLIEGG-AYGTTCARVGCMPSKLLIAA 60 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-CSCEEEEESS-CSSCHHHHHSHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCC-CCCCcccccChhcCHHHHHH
Confidence 59999999999999999999999 9999999997 48999998899888776554
No 124
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.97 E-value=7.2e-10 Score=109.04 Aligned_cols=130 Identities=19% Similarity=0.229 Sum_probs=79.4
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchH-HHHH---HHhCCCcccc-CCeE
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPA-HIFL---DELGIDYDEQ-DNYV 164 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~-~~~l---~~~G~~~~~~-~~~~ 164 (356)
+|||+|||||++|+++|+.|++. |++|+|||| ..+||.|.+.||++.+.+..... ...+ ..+|+.+... .+|.
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~-G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 82 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAAL-GKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWA 82 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT-TCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-CCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHH
Confidence 59999999999999999999999 999999999 57898888888877766544322 2222 2344432211 0010
Q ss_pred E-Eech----HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCC
Q 018414 165 V-IKHA----ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCG 239 (356)
Q Consensus 165 ~-~~~~----~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtG 239 (356)
. .... ..+...+...+ ++.+++++.+ .+..+ +... +.+.. +...+.+|.+|+|||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~-~~~gv~~~~g-~~~~i--~~~~---v~~~~-------------~~~~~~~d~lviAtG 142 (463)
T 4dna_A 83 KLVAAKEQEIARLEGLYRKGL-ANAGAEILDT-RAELA--GPNT---VKLLA-------------SGKTVTAERIVIAVG 142 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHHTCEEEES-CEEES--SSSE---EEETT-------------TTEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhCCCEEEEE-EEEEe--eCCE---EEEec-------------CCeEEEeCEEEEecC
Confidence 0 0001 11222222223 3568998888 33332 2222 22210 136799999999999
Q ss_pred CC
Q 018414 240 HD 241 (356)
Q Consensus 240 g~ 241 (356)
..
T Consensus 143 ~~ 144 (463)
T 4dna_A 143 GH 144 (463)
T ss_dssp EE
T ss_pred CC
Confidence 64
No 125
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.97 E-value=3e-10 Score=112.62 Aligned_cols=138 Identities=16% Similarity=0.237 Sum_probs=81.3
Q ss_pred cccEEEECCCHHHHHHHHHhhc-CCCCeEEEEe--------ccCCCCCccccCCccchhhhccchH-HHHHH---HhCCC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSK-NPNIQIAIIE--------QSVSPGGGAWLGGQLFSAMVVRKPA-HIFLD---ELGID 156 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~-~~G~~V~llE--------k~~~~Gg~~~~~g~~~~~~~~~~~~-~~~l~---~~G~~ 156 (356)
+|||+|||||++|+++|++|++ . |++|+||| +...+||.|.+.||++.+.+..... .+.+. .+|+.
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~ 81 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLH-KKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWE 81 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEE
T ss_pred cccEEEECCCHHHHHHHHHHHHHc-CCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCcc
Confidence 5899999999999999999999 9 99999999 3557899888888888776654322 22222 23432
Q ss_pred ccc---cCCeEEE-echH----HHHHHHHHHHHcCC-CcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCC-C
Q 018414 157 YDE---QDNYVVI-KHAA----LFTSTIMSKLLARP-NVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMD-P 226 (356)
Q Consensus 157 ~~~---~~~~~~~-~~~~----~~~~~l~~~~~~~~-gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~-~ 226 (356)
... ..+|... .... .+...+.+.+ ++. |++++.++ ++.+ +...+. +... ... +++ .
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l-~~~~gv~~~~g~-~~~i--~~~~v~-v~~~------~~~---~g~~~ 147 (490)
T 1fec_A 82 LDRESVRPNWKALIAAKNKAVSGINDSYEGMF-ADTEGLTFHQGF-GALQ--DNHTVL-VRES------ADP---NSAVL 147 (490)
T ss_dssp CCGGGCEECHHHHHHHHHHHHHHHHHHHHHHH-HTSTTEEEEESE-EEEE--ETTEEE-EESS------SST---TSCEE
T ss_pred cCCcccccCHHHHHHHHHHHHHHHHHHHHHHH-hcCCCcEEEEeE-EEEe--eCCEEE-EEee------ccC---CCCce
Confidence 210 0011000 0011 1112222233 366 99999985 5443 333322 1110 000 000 1
Q ss_pred eEEEcCEEEEcCCCCC
Q 018414 227 NVMEAKVVVSSCGHDG 242 (356)
Q Consensus 227 ~~i~Ak~VI~AtGg~~ 242 (356)
.++.+|+||+|||...
T Consensus 148 ~~~~~d~lviAtGs~p 163 (490)
T 1fec_A 148 ETLDTEYILLATGSWP 163 (490)
T ss_dssp EEEEEEEEEECCCEEE
T ss_pred EEEEcCEEEEeCCCCC
Confidence 5799999999999643
No 126
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.96 E-value=2.6e-10 Score=113.36 Aligned_cols=52 Identities=27% Similarity=0.477 Sum_probs=44.8
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhcc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVR 143 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~ 143 (356)
+|||+|||||++|+++|+.|++. |++|+|+|+. ..||.|.+.+|++.+.+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~-g~~V~liE~~-~~GG~c~~~gc~P~k~l~~ 53 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARH-NAKVALVEKS-RLGGTCVNVGCVPKKIMFN 53 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-TCCEEEEESS-STTHHHHHTSHHHHHHHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCC-CcCccccccCCcchHHHHH
Confidence 48999999999999999999999 9999999998 4788877778877655443
No 127
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.96 E-value=3e-09 Score=104.65 Aligned_cols=134 Identities=17% Similarity=0.197 Sum_probs=79.6
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHH----h-CCCcccc-CCe
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDE----L-GIDYDEQ-DNY 163 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~----~-G~~~~~~-~~~ 163 (356)
++||+|||||++|+++|++|++. |++|+|||+. .+||.+.+.||++.+.+........... + |++.... ..+
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQ-GAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDR 81 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCH
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCH
Confidence 58999999999999999999999 9999999998 6888887778877665544322211111 1 2211100 011
Q ss_pred EE-EechHHHHHHH----HHHHHcCC-CcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEc
Q 018414 164 VV-IKHAALFTSTI----MSKLLARP-NVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSS 237 (356)
Q Consensus 164 ~~-~~~~~~~~~~l----~~~~~~~~-gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~A 237 (356)
.. ..+...+...+ +....++. |++++.++ ++.+ +.+.+. +...+ ++..++++|+||+|
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~-~~~~--~~~~~~-v~~~~------------g~~~~~~~d~lviA 145 (467)
T 1zk7_A 82 SKLLAQQQARVDELRHAKYEGILGGNPAITVVHGE-ARFK--DDQSLT-VRLNE------------GGERVVMFDRCLVA 145 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEE-EEEE--ETTEEE-EEETT------------SSEEEEECSEEEEC
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEE-EEEc--cCCEEE-EEeCC------------CceEEEEeCEEEEe
Confidence 10 00111122222 12333455 89998874 5443 334332 33221 11267999999999
Q ss_pred CCCC
Q 018414 238 CGHD 241 (356)
Q Consensus 238 tGg~ 241 (356)
||..
T Consensus 146 tGs~ 149 (467)
T 1zk7_A 146 TGAS 149 (467)
T ss_dssp CCEE
T ss_pred CCCC
Confidence 9964
No 128
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.95 E-value=3.5e-10 Score=111.86 Aligned_cols=135 Identities=18% Similarity=0.201 Sum_probs=80.2
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHH-HHH---HHhCCCc-----c-
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAH-IFL---DELGIDY-----D- 158 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~-~~l---~~~G~~~-----~- 158 (356)
.+|||+|||||++|+++|+.|++. |++|+|||++ ..||.|.+.||++.+.+...... ..+ ..+|+.. .
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~-g~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 87 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASY-GAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKE 87 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-SCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGG
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHC-CCcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccccccc
Confidence 369999999999999999999999 9999999998 67888777777776655433211 222 1233322 1
Q ss_pred -ccCCeEEE-echHH----HHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcC
Q 018414 159 -EQDNYVVI-KHAAL----FTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAK 232 (356)
Q Consensus 159 -~~~~~~~~-~~~~~----~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak 232 (356)
...+|... ..... +...+.+.+ ++.|++++.++ ++.+ +.+.+ .+...+ ++..++.+|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gv~~~~g~-~~~i--~~~~~-~v~~~~------------g~~~~~~~d 150 (479)
T 2hqm_A 88 HLTFNWPEFKQKRDAYVHRLNGIYQKNL-EKEKVDVVFGW-ARFN--KDGNV-EVQKRD------------NTTEVYSAN 150 (479)
T ss_dssp GCCBCHHHHHHHHHHHHHHHHHHHHHHH-HHTTEEEEEEE-EEEC--TTSCE-EEEESS------------SCCEEEEEE
T ss_pred cCccCHHHHHHHHHHHHHHHHHHHHHHH-HhCCCEEEEeE-EEEe--eCCEE-EEEeCC------------CcEEEEEeC
Confidence 01111100 01111 112222233 35789998884 4433 33332 222221 122479999
Q ss_pred EEEEcCCCCC
Q 018414 233 VVVSSCGHDG 242 (356)
Q Consensus 233 ~VI~AtGg~~ 242 (356)
.||+|||+..
T Consensus 151 ~lviAtGs~p 160 (479)
T 2hqm_A 151 HILVATGGKA 160 (479)
T ss_dssp EEEECCCEEE
T ss_pred EEEEcCCCCC
Confidence 9999999643
No 129
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.95 E-value=2.5e-09 Score=105.08 Aligned_cols=133 Identities=18% Similarity=0.188 Sum_probs=79.0
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccch-HHHHHH----HhCCCcccc-CCe
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKP-AHIFLD----ELGIDYDEQ-DNY 163 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~-~~~~l~----~~G~~~~~~-~~~ 163 (356)
+|||+|||||++|+++|+.|++. |++|+|+|+. ..||.+.+.++++.+.+.... ..+.+. .+|+. ... .++
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~-G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~-~~~~~~~ 79 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQL-GLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGIS-GEVTFDY 79 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEE-ECCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCC-CCCccCH
Confidence 48999999999999999999999 9999999998 677766666666554433321 122222 23332 000 000
Q ss_pred EEE-ech----HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcC
Q 018414 164 VVI-KHA----ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSC 238 (356)
Q Consensus 164 ~~~-~~~----~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~At 238 (356)
... .+. ..+...+.+.+. +.|++++.++.+. .+++.+. +...+ ++..++++|+||+||
T Consensus 80 ~~~~~~~~~~~~~l~~~l~~~~~-~~gv~~~~g~~~~---id~~~v~-V~~~~------------G~~~~~~~d~lViAt 142 (464)
T 2a8x_A 80 GIAYDRSRKVAEGRVAGVHFLMK-KNKITEIHGYGTF---ADANTLL-VDLND------------GGTESVTFDNAIIAT 142 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-HTTCEEECEEEEE---SSSSEEE-EEETT------------SCCEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hCCCEEEEeEEEE---ecCCeEE-EEeCC------------CceEEEEcCEEEECC
Confidence 000 000 112223334444 5799999987543 2444332 33321 112679999999999
Q ss_pred CCCC
Q 018414 239 GHDG 242 (356)
Q Consensus 239 Gg~~ 242 (356)
|+..
T Consensus 143 G~~~ 146 (464)
T 2a8x_A 143 GSST 146 (464)
T ss_dssp CEEE
T ss_pred CCCC
Confidence 9754
No 130
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.94 E-value=1.2e-09 Score=107.18 Aligned_cols=51 Identities=24% Similarity=0.438 Sum_probs=45.3
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhc
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVV 142 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~ 142 (356)
|||+|||||++|+++|+.|++. |++|+|||+.+.+||.+.+.++++.+.+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~~~~GG~~~~~g~~p~k~l~ 52 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQL-GMKVGVVEKEKALGGTCLRVGCIPSKALL 52 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSSSHHHHHHSHHHHHHHH
T ss_pred CCEEEECCChhHHHHHHHHHHC-CCeEEEEeCCCCCCCccceecchhHHHHH
Confidence 8999999999999999999999 99999999998899888777777765443
No 131
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.93 E-value=3e-09 Score=104.48 Aligned_cols=39 Identities=36% Similarity=0.629 Sum_probs=36.7
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCC--eEEEEeccCCCCCcc
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSVSPGGGA 130 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~llEk~~~~Gg~~ 130 (356)
+||+|||||++||++|++|+++ |. +|+|+|+...+||.+
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~-G~~~~V~vlEa~~~~GG~~ 43 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRA-PCPPKVVLVESSERLGGWI 43 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTS-SSCCEEEEECSSSSSBTTC
T ss_pred ceEEEECCcHHHHHHHHHHHhC-CCCCcEEEEeCCCCCCCce
Confidence 6999999999999999999999 99 999999998888765
No 132
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.92 E-value=2.5e-09 Score=106.19 Aligned_cols=53 Identities=28% Similarity=0.434 Sum_probs=44.6
Q ss_pred cccEEEECCCHHHHHHHHHhhcC-C-CCeEEEEeccCCCCCccccCCccchhhhcc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKN-P-NIQIAIIEQSVSPGGGAWLGGQLFSAMVVR 143 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~-~-G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~ 143 (356)
+|||+|||||++|+++|+.|++. | |++|+|||+.. +||.+.+.++++.+.+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~ 56 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIA 56 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHH
Confidence 48999999999999999999984 3 89999999997 888887777776655443
No 133
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.91 E-value=4.4e-09 Score=103.45 Aligned_cols=129 Identities=16% Similarity=0.185 Sum_probs=78.7
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchH-HHHH---HHhCCCcccc-CCeE
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPA-HIFL---DELGIDYDEQ-DNYV 164 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~-~~~l---~~~G~~~~~~-~~~~ 164 (356)
+|||+|||||++|+++|++|++. |++|+|+|+. .+||.|.+.+|++.+.+..... ...+ ..+|+..... .+|.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~-g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~ 81 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAF-GKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDWP 81 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhC-CCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCHH
Confidence 58999999999999999999999 9999999998 6788877777777665543321 1222 2234332210 1111
Q ss_pred E-EechHHHH----HHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCC
Q 018414 165 V-IKHAALFT----STIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCG 239 (356)
Q Consensus 165 ~-~~~~~~~~----~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtG 239 (356)
. ..+...+. ..+.+.+ ++.|++++.++ ++.+ +...+ .++ ..++++|+||+|||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~-~~~gv~~~~g~-~~~i--~~~~v---~~~---------------g~~~~~d~lviAtG 139 (463)
T 2r9z_A 82 RLVAGRDRYIGAINSFWDGYV-ERLGITRVDGH-ARFV--DAHTI---EVE---------------GQRLSADHIVIATG 139 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHTTCEEEESC-EEEE--ETTEE---EET---------------TEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHCCCEEEEeE-EEEc--cCCEE---EEC---------------CEEEEcCEEEECCC
Confidence 0 00111111 2222222 35799999885 3332 33322 221 25689999999999
Q ss_pred CCC
Q 018414 240 HDG 242 (356)
Q Consensus 240 g~~ 242 (356)
...
T Consensus 140 s~p 142 (463)
T 2r9z_A 140 GRP 142 (463)
T ss_dssp EEE
T ss_pred CCC
Confidence 643
No 134
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.91 E-value=7.6e-09 Score=103.34 Aligned_cols=115 Identities=17% Similarity=0.271 Sum_probs=76.7
Q ss_pred CCcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEe
Q 018414 88 YADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIK 167 (356)
Q Consensus 88 ~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~ 167 (356)
...+||+|||||++|+++|+.|++. |++|+|+|+. .||.+.....+.. +. .++ ..
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~-G~~v~lie~~--~GG~~~~~~~~~~------------------~~---~~~-~~ 264 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARK-GIRTGLMGER--FGGQVLDTVDIEN------------------YI---SVP-KT 264 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSS--TTGGGTTCSCBCC------------------BT---TBS-SB
T ss_pred cCcccEEEECCcHHHHHHHHHHHhC-CCeEEEEECC--CCCcccccccccc------------------cC---CCC-CC
Confidence 3469999999999999999999999 9999999973 4443321111000 00 000 01
Q ss_pred chHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeC--CeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 168 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG--GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 168 ~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
....+...+.+.+. +.|++++.+++|+.+..+. +....+.+.+ ..++++|.||+|||+..
T Consensus 265 ~~~~l~~~l~~~~~-~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~--------------g~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 265 EGQKLAGALKAHVS-DYDVDVIDSQSASKLVPAATEGGLHQIETAS--------------GAVLKARSIIIATGAKW 326 (521)
T ss_dssp CHHHHHHHHHHHHH-TSCEEEECSCCEEEEECCSSTTSCEEEEETT--------------SCEEEEEEEEECCCEEE
T ss_pred CHHHHHHHHHHHHH-HcCCEEEcCCEEEEEEeccCCCceEEEEECC--------------CCEEEcCEEEECCCCCc
Confidence 34556666666664 6799999999999997532 2223344431 35799999999999653
No 135
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.91 E-value=6.1e-09 Score=101.72 Aligned_cols=40 Identities=30% Similarity=0.623 Sum_probs=36.7
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCC------CeEEEEeccCCCCCcc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPN------IQIAIIEQSVSPGGGA 130 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G------~~V~llEk~~~~Gg~~ 130 (356)
.+||+|||||++||++|++|+++ | ++|+|+|+.+.+||..
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~-G~~~~~~~~V~vlEa~~~~GG~~ 50 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKE-IKEKNLPLELTLVEASPRVGGKI 50 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-HTTTTCSEEEEEECSSSSSCTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHHh-ccccCCCCCEEEEECCCCCCceE
Confidence 48999999999999999999998 8 9999999998888753
No 136
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.90 E-value=3.5e-09 Score=105.77 Aligned_cols=130 Identities=12% Similarity=0.110 Sum_probs=80.6
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccch-HHHHHH---HhCCCccccCCeE
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKP-AHIFLD---ELGIDYDEQDNYV 164 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~-~~~~l~---~~G~~~~~~~~~~ 164 (356)
.++||+|||||++|+++|+.|++. |++|+|||+...+||.|.+.++++.+.+.... ....+. .+|+ |.....+
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~-G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~-~~~~~~~- 118 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAM-GGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYW-FPDMTEK- 118 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTT-CCCCTTC-
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCc-HHHHHhh-
Confidence 358999999999999999999999 99999999998788887777776655443321 112222 2232 1111000
Q ss_pred EEechHHHHHHHHH------HHH-----cCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCE
Q 018414 165 VIKHAALFTSTIMS------KLL-----ARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKV 233 (356)
Q Consensus 165 ~~~~~~~~~~~l~~------~~~-----~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~ 233 (356)
......+...+.. ... ++.++++++...++.+. ... +.+. ...+.+|.
T Consensus 119 -~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~--~~~---v~~~---------------g~~~~~d~ 177 (523)
T 1mo9_A 119 -VVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVID--NHT---VEAA---------------GKVFKAKN 177 (523)
T ss_dssp -CCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEE--TTE---EEET---------------TEEEEBSC
T ss_pred -hhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEee--CCE---EEEC---------------CEEEEeCE
Confidence 0013333333321 222 46799998555665543 332 2221 25689999
Q ss_pred EEEcCCCCC
Q 018414 234 VVSSCGHDG 242 (356)
Q Consensus 234 VI~AtGg~~ 242 (356)
||+|||...
T Consensus 178 lViATGs~p 186 (523)
T 1mo9_A 178 LILAVGAGP 186 (523)
T ss_dssp EEECCCEEC
T ss_pred EEECCCCCC
Confidence 999999643
No 137
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.89 E-value=5.9e-10 Score=110.71 Aligned_cols=139 Identities=17% Similarity=0.187 Sum_probs=80.2
Q ss_pred cccEEEECCCHHHHHHHHHhhc-CCCCeEEEEe--------ccCCCCCccccCCccchhhhccchH-HH---HHHHhCCC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSK-NPNIQIAIIE--------QSVSPGGGAWLGGQLFSAMVVRKPA-HI---FLDELGID 156 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~-~~G~~V~llE--------k~~~~Gg~~~~~g~~~~~~~~~~~~-~~---~l~~~G~~ 156 (356)
+|||+|||||++|+++|+.|++ . |++|+||| +...+||.|.+.+|++.+.+..... .+ .+..+|+.
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~ 85 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLY-GKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWE 85 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred ccCEEEECCChhHHHHHHHHHHhc-CCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCcc
Confidence 5899999999999999999999 9 99999999 3456788887878887766554321 12 22234443
Q ss_pred ccc---cCCeEE-EechHHHH----HHHHHHHHcCC-CcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCe
Q 018414 157 YDE---QDNYVV-IKHAALFT----STIMSKLLARP-NVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPN 227 (356)
Q Consensus 157 ~~~---~~~~~~-~~~~~~~~----~~l~~~~~~~~-gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~ 227 (356)
... ..+|.. ......+. ..+...+. +. +++++.++ ++.+ +...+ .+.. ..+.......
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~-~~~gv~~~~g~-~~~i--~~~~v---~v~~------~~~~~~~~~~ 152 (495)
T 2wpf_A 86 FDGSSVKANWKKLIAAKNEAVLDINKSYEGMFN-DTEGLDFFLGW-GSLE--SKNVV---VVRE------TADPKSAVKE 152 (495)
T ss_dssp CCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHH-HCTTEEEEESE-EEEE--ETTEE---EEES------SSSTTSCEEE
T ss_pred cCCcccccCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeEEEEeE-EEEe--eCCEE---EEee------cCCccCCCCe
Confidence 211 001100 00111111 22222333 45 99999985 4443 33332 2210 0000000035
Q ss_pred EEEcCEEEEcCCCCC
Q 018414 228 VMEAKVVVSSCGHDG 242 (356)
Q Consensus 228 ~i~Ak~VI~AtGg~~ 242 (356)
++.+|+||+|||...
T Consensus 153 ~~~~d~lViATGs~p 167 (495)
T 2wpf_A 153 RLQADHILLATGSWP 167 (495)
T ss_dssp EEEEEEEEECCCEEE
T ss_pred EEEcCEEEEeCCCCc
Confidence 799999999999643
No 138
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.89 E-value=6.3e-09 Score=101.95 Aligned_cols=53 Identities=21% Similarity=0.295 Sum_probs=46.2
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRK 144 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~ 144 (356)
+|||+|||||++|+++|+.|++. |++|+|+|++ ..||.|.+.||++.+.+...
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~liE~~-~~GG~~~~~gciP~k~l~~~ 56 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMY-GQKCALIEAK-ELGGTCVNVGCVPKKVMWHA 56 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-TCCEEEEESS-CTTHHHHHHSHHHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEcCC-CCCCcccccCccChHHHHHH
Confidence 58999999999999999999998 9999999998 67888888888877665443
No 139
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.88 E-value=1.3e-09 Score=96.59 Aligned_cols=40 Identities=30% Similarity=0.547 Sum_probs=37.2
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~ 130 (356)
.+||+||||||+||+||+.|+++ |++|+|+||...+||..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~-G~~V~v~Ek~~~~GG~~ 41 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAA-GHQVHLFDKSRGSGGRM 41 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCCCCCcc
Confidence 48999999999999999999999 99999999999888754
No 140
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.87 E-value=1.9e-09 Score=102.20 Aligned_cols=36 Identities=31% Similarity=0.548 Sum_probs=33.3
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSP 126 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~ 126 (356)
++||+|||||++|+++|++|+++ |++|+||||....
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~-G~~V~vle~~~~~ 41 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARK-GYSVHILARDLPE 41 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSCTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCEEEEEeccCCC
Confidence 58999999999999999999999 9999999998643
No 141
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.86 E-value=1.6e-08 Score=99.53 Aligned_cols=39 Identities=23% Similarity=0.336 Sum_probs=36.6
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGG 129 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~ 129 (356)
+|||+|||+|++|+++|+.|++. |++|+++||++.+||.
T Consensus 20 ~~dv~iiG~G~~g~~~a~~l~~~-g~~v~~~e~~~~~Gg~ 58 (475)
T 3p1w_A 20 HYDVIILGTGLKECILSGLLSHY-GKKILVLDRNPYYGGE 58 (475)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCGG
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeccCCCCCC
Confidence 59999999999999999999999 9999999999888764
No 142
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.86 E-value=1.9e-08 Score=98.84 Aligned_cols=42 Identities=31% Similarity=0.502 Sum_probs=36.9
Q ss_pred CCcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 018414 88 YADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (356)
Q Consensus 88 ~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~ 130 (356)
...+||+|||||++||++|+.|+++ |++|+|+|+...+||.+
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~-g~~v~v~E~~~~~GGr~ 55 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSR-GTDAVLLESSARLGGAV 55 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTT-TCCEEEECSSSSSBTTC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHC-CCCEEEEEcCCCCCcee
Confidence 3468999999999999999999999 99999999999888754
No 143
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.83 E-value=2.9e-08 Score=98.88 Aligned_cols=40 Identities=33% Similarity=0.576 Sum_probs=37.3
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~ 130 (356)
++||+|||||++||+||+.|++. |++|+|+|++..+||.+
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~-G~~V~vlE~~~~~GGr~ 43 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDS-GLNVVVLEARDRVGGRT 43 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSSSBTTC
T ss_pred CceEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCCCCce
Confidence 47999999999999999999999 99999999999888765
No 144
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.83 E-value=8.7e-10 Score=105.53 Aligned_cols=124 Identities=18% Similarity=0.142 Sum_probs=75.9
Q ss_pred cEEEECCCHHHHHHHHHhhcC-CCCeEEEEeccCCC---CCccccCCccch----------h-hhccc---hHHHHHHHh
Q 018414 92 DVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSP---GGGAWLGGQLFS----------A-MVVRK---PAHIFLDEL 153 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~-~G~~V~llEk~~~~---Gg~~~~~g~~~~----------~-~~~~~---~~~~~l~~~ 153 (356)
||+|||||++|+++|+.|+++ ||++|+|+||...+ |.+....+.... . ..... ....++. .
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 80 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVH-H 80 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEE-S
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEe-C
Confidence 899999999999999999984 58999999998765 322211111000 0 00000 0000000 1
Q ss_pred CCCcccc-CCeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcC
Q 018414 154 GIDYDEQ-DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAK 232 (356)
Q Consensus 154 G~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak 232 (356)
|..+... .......+...+.+.|.+.+. +.|++++++++|+++... .++++|
T Consensus 81 g~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~gv~i~~~~~v~~i~~~--------------------------~~~~ad 133 (381)
T 3c4a_A 81 NEPSLMSTGVLLCGVERRGLVHALRDKCR-SQGIAIRFESPLLEHGEL--------------------------PLADYD 133 (381)
T ss_dssp SSEEECCCCSCEEEEEHHHHHHHHHHHHH-HTTCEEETTCCCCSGGGC--------------------------CGGGCS
T ss_pred CeeEEecCCCceeeecHHHHHHHHHHHHH-HCCCEEEeCCEeccchhc--------------------------ccccCC
Confidence 1111111 111234566888888888887 459999999987766310 125699
Q ss_pred EEEEcCCCCCC
Q 018414 233 VVVSSCGHDGP 243 (356)
Q Consensus 233 ~VI~AtGg~~~ 243 (356)
.||+|+|..+.
T Consensus 134 ~vV~AdG~~S~ 144 (381)
T 3c4a_A 134 LVVLANGVNHK 144 (381)
T ss_dssp EEEECCGGGGG
T ss_pred EEEECCCCCch
Confidence 99999998765
No 145
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.83 E-value=8.4e-09 Score=104.66 Aligned_cols=137 Identities=18% Similarity=0.241 Sum_probs=78.5
Q ss_pred CCcccEEEECCCHHHHHHHHHhhcCCCCeEEEEecc-C-------CCCCccccCCccchhhhccch----HHHHHHHhCC
Q 018414 88 YADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS-V-------SPGGGAWLGGQLFSAMVVRKP----AHIFLDELGI 155 (356)
Q Consensus 88 ~~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~-~-------~~Gg~~~~~g~~~~~~~~~~~----~~~~l~~~G~ 155 (356)
..+|||+|||||++|+++|+.|++. |++|+|+|+. + ..||.|.+.++++.+.+.... ....+..+|+
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~-g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~ 183 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKY-GAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGW 183 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cccccEEEECCCccHHHHHHHHHhC-CCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCc
Confidence 3469999999999999999999999 9999999973 2 256655566666655443321 2334556776
Q ss_pred Ccccc---CCeEEE-echHHHHHH----HHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCe
Q 018414 156 DYDEQ---DNYVVI-KHAALFTST----IMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPN 227 (356)
Q Consensus 156 ~~~~~---~~~~~~-~~~~~~~~~----l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~ 227 (356)
.+... .+|... .....+... +...+ +..+++++.+. +..+ +...+. +... +|+..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~V~~~~~~-~~~~--~~~~v~-v~~~------------~g~~~ 246 (598)
T 2x8g_A 184 SLDRSKISHNWSTMVEGVQSHIGSLNWGYKVAL-RDNQVTYLNAK-GRLI--SPHEVQ-ITDK------------NQKVS 246 (598)
T ss_dssp CCCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHTTCEEECSE-EEEE--ETTEEE-EECT------------TCCEE
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHH-hhCCcEEEEEE-EEEc--CCCEEE-EEeC------------CCCeE
Confidence 55321 111100 000111111 11122 24689988763 3222 223222 1111 11225
Q ss_pred EEEcCEEEEcCCCCC
Q 018414 228 VMEAKVVVSSCGHDG 242 (356)
Q Consensus 228 ~i~Ak~VI~AtGg~~ 242 (356)
++.+|+||+|||+..
T Consensus 247 ~~~~d~lviAtGs~p 261 (598)
T 2x8g_A 247 TITGNKIILATGERP 261 (598)
T ss_dssp EEEEEEEEECCCEEE
T ss_pred EEEeCEEEEeCCCCC
Confidence 689999999999643
No 146
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.82 E-value=4.3e-08 Score=96.78 Aligned_cols=40 Identities=28% Similarity=0.508 Sum_probs=37.2
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~ 130 (356)
++||+|||||++||+||+.|++. |++|+|+|+...+||.+
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~-g~~v~v~E~~~~~GGr~ 78 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVA-GFKTLLLEARDRIGGRS 78 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSBSBTTC
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-CCCEEEEeCCCCCCCcc
Confidence 48999999999999999999999 99999999999888764
No 147
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.82 E-value=9.8e-10 Score=103.73 Aligned_cols=38 Identities=32% Similarity=0.482 Sum_probs=33.5
Q ss_pred cEEEECCCHHHHHHHHHhhcCCC------CeEEEEeccCCCCCcc
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPN------IQIAIIEQSVSPGGGA 130 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G------~~V~llEk~~~~Gg~~ 130 (356)
||+|||||++|+++|++|+++ | .+|+|||+....++.+
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-G~~~~p~~~V~vlE~~~~~~~aS 45 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-YHSVLQPLDIKVYADRFTPLTTT 45 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-HTTTSSSCEEEEEESSCGGGSGG
T ss_pred cEEEECCCHHHHHHHHHHHHh-ccccCCCceEEEEECCCCCCCcc
Confidence 899999999999999999998 7 9999999986544443
No 148
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.78 E-value=8.7e-09 Score=103.78 Aligned_cols=37 Identities=43% Similarity=0.693 Sum_probs=33.4
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSP 126 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~ 126 (356)
+||+||||||.+|+.+|.+|++.++.+|+|||++...
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4999999999999999999999559999999998643
No 149
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.73 E-value=2.8e-08 Score=98.54 Aligned_cols=112 Identities=28% Similarity=0.348 Sum_probs=76.4
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
++||+|||||++|+++|++|++. ++|+|||+...+||..+...... +|++ . ..
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~--~~V~vie~~~~~GG~~~~~~~~~---------------~g~~------~----~~ 160 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY--LTVALIEERGWLGGDMWLKGIKQ---------------EGFN------K----DS 160 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT--CCEEEECTTSSSSCSGGGTCSEE---------------TTTT------E----EH
T ss_pred cCCEEEECccHHHHHHHHHHHhc--CCEEEEeCCCCCCCeeecccccc---------------CCCC------C----CH
Confidence 58999999999999999999987 89999999988776544211000 1111 0 23
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
.++...+.+.+ +.+++++.++.|.++..++..+....... ++...+.+|++|+|||...
T Consensus 161 ~~~~~~l~~~l--~~~v~~~~~~~v~~i~~~~~~~~~~~~~~------------~~~~~~~~d~lvlAtGa~~ 219 (493)
T 1y56_A 161 RKVVEELVGKL--NENTKIYLETSALGVFDKGEYFLVPVVRG------------DKLIEILAKRVVLATGAID 219 (493)
T ss_dssp HHHHHHHHHTC--CTTEEEETTEEECCCEECSSSEEEEEEET------------TEEEEEEESCEEECCCEEE
T ss_pred HHHHHHHHHHH--hcCCEEEcCCEEEEEEcCCcEEEEEEecC------------CeEEEEECCEEEECCCCCc
Confidence 34444444444 56999999999998887665443322211 1124789999999999643
No 150
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.73 E-value=9.2e-08 Score=95.02 Aligned_cols=137 Identities=15% Similarity=0.164 Sum_probs=82.8
Q ss_pred cccEEEECCCHHHHHHHHHhhcC-------------CCCeEEEEeccCCCCCccccCCccchhh----------hc--c-
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKN-------------PNIQIAIIEQSVSPGGGAWLGGQLFSAM----------VV--R- 143 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~-------------~G~~V~llEk~~~~Gg~~~~~g~~~~~~----------~~--~- 143 (356)
-|||||||+|++||++|+.|.+. ++..++.+||.+..+ |..|.++... +. .
T Consensus 39 i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~---Wh~g~~~p~~~~q~~fl~Dlvtl~~P 115 (501)
T 4b63_A 39 LHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFA---WHSGMLVPGSKMQISFIKDLATLRDP 115 (501)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCC---SSGGGCCTTCBCSSCGGGSSSTTTCT
T ss_pred cCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCC---cCCCCCCCCccccccchhhhccccCC
Confidence 38999999999999999998753 144677888876544 5544332211 00 0
Q ss_pred ---chHHHHHHHhCC--CccccCCeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCC-------eEEEEEEcc
Q 018414 144 ---KPAHIFLDELGI--DYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG-------RVGGVVTNW 211 (356)
Q Consensus 144 ---~~~~~~l~~~G~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~-------~v~gv~~~~ 211 (356)
.....+|.+.|- +|.....+ .....++.++|...+ ++.+..+.++++|+++...+. ..+.|.+.+
T Consensus 116 ~s~~sf~~yl~~~~rl~~f~~~~~~--~p~r~E~~~Yl~~~A-~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~ 192 (501)
T 4b63_A 116 RSSFTFLNYLHQKGRLIHFTNLSTF--LPARLEFEDYMRWCA-QQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRN 192 (501)
T ss_dssp TCTTSHHHHHHHHTCHHHHHTTCCS--CCBHHHHHHHHHHHH-HTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEE
T ss_pred CCccchHHHHHHhCCccCCccccCC--CCCHHHHHHHHHHHH-HHcCCceEcceEEEeeccccccccccccceEEEEEec
Confidence 123455555442 22222221 123455665544433 356777999999999987542 134444432
Q ss_pred eeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 212 ALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 212 ~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
.. .++..++.|+.||+|+|..
T Consensus 193 ------~~---~g~~~~~~ar~vVlatG~~ 213 (501)
T 4b63_A 193 ------VE---TGEISARRTRKVVIAIGGT 213 (501)
T ss_dssp ------TT---TCCEEEEEEEEEEECCCCE
T ss_pred ------CC---CceEEEEEeCEEEECcCCC
Confidence 11 2345789999999999954
No 151
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.72 E-value=7.2e-08 Score=103.03 Aligned_cols=124 Identities=19% Similarity=0.213 Sum_probs=78.1
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
++||+|||+|++|+++|+.|++. |++|+|||+...+||.++. . .+.... .. ..
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~-G~~V~lie~~~~~GG~~~~-~---~k~~i~------------------~~----~~ 180 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRS-GARVMLLDERAEAGGTLLD-T---AGEQID------------------GM----DS 180 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSSGGGGG-S---SCCEET------------------TE----EH
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCCCCCCceecc-C---CccccC------------------CC----CH
Confidence 58999999999999999999999 9999999999888865552 1 000000 00 12
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCC-CCCCCCeEEEcCEEEEcCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDT-QSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~-~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
.++...+.+.+.+..+++++.+++|..+.. ++.+..+......+...... ...++..++.+|+||+|||..
T Consensus 181 ~~~~~~~~~~l~~~~~v~~~~~~~V~~i~~-~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~ 252 (965)
T 2gag_A 181 SAWIEQVTSELAEAEETTHLQRTTVFGSYD-ANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAH 252 (965)
T ss_dssp HHHHHHHHHHHHHSTTEEEESSEEEEEEET-TTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHhhcCCcEEEeCCEEEeeec-CCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCc
Confidence 344455556665456999999999988853 34443332211000000000 000112478999999999974
No 152
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.71 E-value=3.4e-08 Score=100.64 Aligned_cols=38 Identities=32% Similarity=0.496 Sum_probs=35.4
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGG 128 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg 128 (356)
+|||+|||+|++|+.+|+.|++. |++|+|||+....++
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~-G~~V~liE~~~~~gg 83 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGA-GYKVAMFDIGEIDSG 83 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCCCSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhC-CCcEEEEeccCCCCC
Confidence 58999999999999999999999 999999999876664
No 153
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.69 E-value=4.5e-08 Score=96.33 Aligned_cols=120 Identities=13% Similarity=0.128 Sum_probs=61.6
Q ss_pred ccEEEECCCHHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 91 TDVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~-~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
+||+|||||++|+++|+.|++. +|.+|+|||+.+.++ |....++. ++ +-.+.....+.. ..
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~---~~~~gl~~----------~~---~g~~~~~~~~~~--~~ 65 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS---YGGCGIPY----------YV---SGEVSNIESLQA--TP 65 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----------------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc---ccccccch----------hh---cCCCCchHHhcc--cc
Confidence 6999999999999999999973 489999999997653 11100000 00 000000000000 00
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
..+. ...+.+.++.+++++++++|+.+..++..+...... +++...+.+|.+|+|||..
T Consensus 66 ~~~~-~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~~~~~~------------~g~~~~~~~d~lviAtG~~ 124 (472)
T 3iwa_A 66 YNVV-RDPEFFRINKDVEALVETRAHAIDRAAHTVEIENLR------------TGERRTLKYDKLVLALGSK 124 (472)
T ss_dssp ----------------CEEECSEEEEEEETTTTEEEEEETT------------TCCEEEEECSEEEECCCEE
T ss_pred chhc-cCHHHHhhhcCcEEEECCEEEEEECCCCEEEEeecC------------CCCEEEEECCEEEEeCCCC
Confidence 0011 112233335689999999999997766654321111 1123579999999999964
No 154
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.68 E-value=3.5e-08 Score=96.62 Aligned_cols=112 Identities=19% Similarity=0.279 Sum_probs=68.9
Q ss_pred ccEEEECCCHHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 91 TDVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~-~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
+||+|||||++|+++|+.|++. +|.+|+|||+...+|. ....+.. ++.. .+.. .
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~---~~~~~~~----------~~~~---~~~~---------~ 57 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGY---LSGGLSA----------YFNH---TINE---------L 57 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSS---CCC-----------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcc---cCccchh----------hhcC---CCCC---------H
Confidence 5999999999999999999983 4899999999986651 1111100 0000 0000 0
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
..+...+.+.+. +.+++++.+++|+.+..+++.+... ... +..++.+|.+|+|||+..
T Consensus 58 ~~~~~~~~~~~~-~~gi~~~~~~~V~~id~~~~~v~v~-~~~-------------~~~~~~~d~lviAtG~~p 115 (452)
T 3oc4_A 58 HEARYITEEELR-RQKIQLLLNREVVAMDVENQLIAWT-RKE-------------EQQWYSYDKLILATGASQ 115 (452)
T ss_dssp ---CCCCHHHHH-HTTEEEECSCEEEEEETTTTEEEEE-ETT-------------EEEEEECSEEEECCCCCB
T ss_pred HHhhcCCHHHHH-HCCCEEEECCEEEEEECCCCEEEEE-ecC-------------ceEEEEcCEEEECCCccc
Confidence 000000112222 4689999999999998766654322 110 246799999999999754
No 155
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.68 E-value=8.2e-08 Score=94.22 Aligned_cols=39 Identities=31% Similarity=0.579 Sum_probs=36.0
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCC--CeEEEEeccCCCCCc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPN--IQIAIIEQSVSPGGG 129 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G--~~V~llEk~~~~Gg~ 129 (356)
.+||+|||||++|+++|++|+++ | ++|+|+|+...+||.
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~-g~~~~v~v~E~~~~~GG~ 44 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA-FPDLNITLLEAGERLGGK 44 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH-CTTSEEEEECSSSSSBTT
T ss_pred cccEEEECCCHHHHHHHHHHHHh-CCCCCEEEEECCCCCCce
Confidence 48999999999999999999998 8 999999998888764
No 156
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.66 E-value=4.1e-08 Score=102.27 Aligned_cols=38 Identities=34% Similarity=0.670 Sum_probs=35.9
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGG 128 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg 128 (356)
.+||+|||||++|+++|+.|++. |++|+|+|+...+||
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNF-GIKVTVLEAKDRIGG 373 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCcEEEEecccceec
Confidence 58999999999999999999999 999999999888877
No 157
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.64 E-value=4.7e-08 Score=95.59 Aligned_cols=110 Identities=15% Similarity=0.161 Sum_probs=64.4
Q ss_pred cccEEEECCCHHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEec
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~-~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 168 (356)
.+||+|||||++|+++|+.|++. ++.+|+|+|+.+..+...+ .++. ++... ..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~---~~p~----------~~~~~-------------~~ 56 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPC---GIPY----------VVEGL-------------ST 56 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCc---CCcc----------ccCCC-------------CC
Confidence 37999999999999999999984 3789999999875542111 0000 00000 00
Q ss_pred hHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
...+.....+.+.++.|++++++++|+.+..++ ..+...+ ...++.+|.||+|||+.
T Consensus 57 ~~~~~~~~~~~~~~~~gi~v~~~~~v~~i~~~~---~~v~~~~-------------g~~~~~~d~lviAtG~~ 113 (449)
T 3kd9_A 57 PDKLMYYPPEVFIKKRGIDLHLNAEVIEVDTGY---VRVRENG-------------GEKSYEWDYLVFANGAS 113 (449)
T ss_dssp ---------CTHHHHTTCEEETTCEEEEECSSE---EEEECSS-------------SEEEEECSEEEECCCEE
T ss_pred HHHhhhcCHHHHHHhcCcEEEecCEEEEEecCC---CEEEECC-------------ceEEEEcCEEEECCCCC
Confidence 111111122233235699999999998884322 1222211 12579999999999964
No 158
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.64 E-value=2.2e-08 Score=100.31 Aligned_cols=35 Identities=29% Similarity=0.498 Sum_probs=32.2
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCC
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~ 125 (356)
.+||+||||+|.+|+.+|.+|++ |.+|+|||++..
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse--g~~VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE--KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT--TSCEEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc--CCcEEEEecCCC
Confidence 35999999999999999999998 799999999854
No 159
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.63 E-value=1.6e-08 Score=98.42 Aligned_cols=34 Identities=24% Similarity=0.484 Sum_probs=31.9
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.+||+|||||++|+++|+.|+++ |++|+||||..
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~-G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQH-DVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHT-TCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 47999999999999999999999 99999999975
No 160
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.63 E-value=2.1e-08 Score=103.56 Aligned_cols=41 Identities=34% Similarity=0.518 Sum_probs=37.5
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAW 131 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~ 131 (356)
.+||+|||||++|+++|+.|+++ |++|+|+|+....||..+
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~-G~~V~liE~~~~~GG~~~ 431 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVR-GYDVVLAEAGRDLGGRVT 431 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSSCTHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCCCCEee
Confidence 58999999999999999999999 999999999988877543
No 161
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.62 E-value=4.6e-08 Score=98.15 Aligned_cols=59 Identities=27% Similarity=0.325 Sum_probs=43.6
Q ss_pred HHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEE---EcCEEEEcCCCCC
Q 018414 175 TIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVM---EAKVVVSSCGHDG 242 (356)
Q Consensus 175 ~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i---~Ak~VI~AtGg~~ 242 (356)
.+++.+.++.|++++.++.|++|+.+++++.||.+.+ .. +++..++ .+|.||+|+|+++
T Consensus 200 ~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~------~~---~g~~~~~~v~~~~~VIlaaG~~~ 261 (546)
T 1kdg_A 200 TYLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTND------PT---LGPNGFIPVTPKGRVILSAGAFG 261 (546)
T ss_dssp THHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESC------TT---SSGGGEEEEEEEEEEEECSHHHH
T ss_pred HHHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEe------cC---CCceeEEEEEeCCEEEEcCChhc
Confidence 4566666567999999999999999988999998742 10 1122233 7899999999754
No 162
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.59 E-value=7e-08 Score=97.62 Aligned_cols=115 Identities=17% Similarity=0.177 Sum_probs=70.8
Q ss_pred cccEEEECCCHHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEec
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~-~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 168 (356)
..||+|||||++|+++|+.|++. ++.+|+|+|+...++ |....++ .++ .+......
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~---~~~~~lp----------~~~--~g~~~~~~-------- 92 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS---FANCGLP----------YYI--GGVITERQ-------- 92 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS---BCGGGHH----------HHH--TTSSCCGG--------
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc---ccCCCCc----------hhh--cCcCCChH--------
Confidence 47999999999999999999984 479999999997654 1110000 000 01100000
Q ss_pred hHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
..+... ++.+.++.+++++++++|+++..+++.+...... +++...+.+|.||+|||..
T Consensus 93 -~~~~~~-~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~------------~g~~~~~~~d~lviAtG~~ 151 (588)
T 3ics_A 93 -KLLVQT-VERMSKRFNLDIRVLSEVVKINKEEKTITIKNVT------------TNETYNEAYDVLILSPGAK 151 (588)
T ss_dssp -GGBSSC-HHHHHHHTTCEEECSEEEEEEETTTTEEEEEETT------------TCCEEEEECSEEEECCCEE
T ss_pred -HhhccC-HHHHHHhcCcEEEECCEEEEEECCCCEEEEeecC------------CCCEEEEeCCEEEECCCCC
Confidence 000011 2222235689999999999998776654322111 1123578999999999964
No 163
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.59 E-value=1.3e-08 Score=99.29 Aligned_cols=113 Identities=15% Similarity=0.132 Sum_probs=67.1
Q ss_pred cEEEECCCHHHHHHHHHhhcCCC--CeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPN--IQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G--~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
.|||||||++|++||..|++. | .+|+|||+....... ..++. . ++. +...+...... ...
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-g~~~~V~lie~~~~~~~~---~~~l~-~---------~~~--~~~~~~~~~~~--~~~ 63 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-DKESDIIIFEKDRDMSFA---NCALP-Y---------VIG--EVVEDRRYALA--YTP 63 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-CSSSCEEEEESSSCSSBC---GGGHH-H---------HHT--TSSCCGGGTBC--CCH
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCCCcEEEEeCCCCCCCC---cchhH-H---------HHc--CCccchhhhhh--cCH
Confidence 599999999999999999986 5 679999998643321 11111 0 110 01000000000 111
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
. .++ ++.+++++.+++|+.+..+...+...... .++..++.+|++|+|||+..
T Consensus 64 ~----~~~----~~~~i~~~~~~~V~~id~~~~~~~~~~~~------------~~~~~~~~yd~lVIATGs~p 116 (437)
T 4eqs_A 64 E----KFY----DRKQITVKTYHEVIAINDERQTVSVLNRK------------TNEQFEESYDKLILSPGASA 116 (437)
T ss_dssp H----HHH----HHHCCEEEETEEEEEEETTTTEEEEEETT------------TTEEEEEECSEEEECCCEEE
T ss_pred H----HHH----HhcCCEEEeCCeEEEEEccCcEEEEEecc------------CCceEEEEcCEEEECCCCcc
Confidence 1 112 24589999999999987665544322211 11346789999999999653
No 164
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.58 E-value=6.7e-08 Score=95.41 Aligned_cols=115 Identities=11% Similarity=0.098 Sum_probs=69.8
Q ss_pred ccEEEECCCHHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 91 TDVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~-~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
+||+|||||++|+++|+.|++. +|.+|+|||+....+...+ .+. .++......+..
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~---~~~----------~~~~~~~~~~~~---------- 93 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQC---GLP----------YVISGAIASTEK---------- 93 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGG---GHH----------HHHTTSSSCGGG----------
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCC---Ccc----------hhhcCCcCCHHH----------
Confidence 6999999999999999999983 3899999999876542111 000 011000000110
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
+.....+.+.++.|++++++++|+.+..+++.+. +... . +++..++.+|.||+|||...
T Consensus 94 --l~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~-v~~~--------~---~g~~~~~~~d~lviAtG~~p 152 (480)
T 3cgb_A 94 --LIARNVKTFRDKYGIDAKVRHEVTKVDTEKKIVY-AEHT--------K---TKDVFEFSYDRLLIATGVRP 152 (480)
T ss_dssp --GBSSCHHHHHHTTCCEEESSEEEEEEETTTTEEE-EEET--------T---TCCEEEEECSEEEECCCEEE
T ss_pred --hhhcCHHHHHhhcCCEEEeCCEEEEEECCCCEEE-EEEc--------C---CCceEEEEcCEEEECCCCcc
Confidence 0001122333356999999999998876665443 2210 0 01223799999999999643
No 165
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.58 E-value=2.3e-07 Score=88.41 Aligned_cols=100 Identities=18% Similarity=0.174 Sum_probs=62.1
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhh---------cc--chHHHHHHHhCCCccc
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMV---------VR--KPAHIFLDELGIDYDE 159 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~---------~~--~~~~~~l~~~G~~~~~ 159 (356)
+||+|||||++|+.+|+.|++. |.+|+|+|+....+......+.+..-.+ .+ ....+.++.+|-..-.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~-G~~V~liE~~~~~~tp~h~~d~i~eL~CnpSigG~~~~~akGlL~~EIdaLGg~m~~ 80 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRL-GVPVRLFEMRPKRMTPAHGTDRFAEIVCSNSLGGEGETNAKGLLQAEMRRAGSLVME 80 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEECCTTTSCCSSCCSSCTTCCCSCCEEEECSTTCHHHHHHHHHHHHTCHHHH
T ss_pred CCEEEECchHHHHHHHHHHHHC-CCcEEEEeccCCcCCccccCCCccccccCcCCCccccccchhHHHHHHHHcCChHhh
Confidence 6999999999999999999999 9999999997643322111111000000 00 0123444444432111
Q ss_pred -------cCCeEEEechHHHHHHHHHHHHcCCCcEEEcC
Q 018414 160 -------QDNYVVIKHAALFTSTIMSKLLARPNVKLFNA 191 (356)
Q Consensus 160 -------~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~ 191 (356)
...+....+...|...+.+.+.+.++++++.+
T Consensus 81 ~aD~~~ipAg~al~vDR~~f~~~~~~~le~~pni~l~q~ 119 (443)
T 3g5s_A 81 AADLARVPAGGALAVDREEFSGYITERLTGHPLLEVVRE 119 (443)
T ss_dssp HHHHSEECCTTEEEECHHHHHHHHHHHHHTCTTEEEECS
T ss_pred hhhhcCCCCCccccCCcHHHHHHHHHHHHcCCCeEEEhh
Confidence 11223345668888888888888889998865
No 166
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.58 E-value=2.3e-07 Score=93.11 Aligned_cols=58 Identities=21% Similarity=0.241 Sum_probs=43.3
Q ss_pred HHHHHHcCCCcEEEcCeEEEEEEEeC-CeEEEEEEcceeeecccCCCCCCCCeEEEcC-EEEEcCCCCC
Q 018414 176 IMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAK-VVVSSCGHDG 242 (356)
Q Consensus 176 l~~~~~~~~gv~i~~~~~v~~i~~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak-~VI~AtGg~~ 242 (356)
++..+.++.|++|++++.|++|+.++ +++.||.+.+ .. .++..+++|+ .||+|+|+++
T Consensus 214 ~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~------~~---~g~~~~i~A~k~VIlaaG~~~ 273 (546)
T 2jbv_A 214 YIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVD------SA---FGHTHRLTARNEVVLSTGAID 273 (546)
T ss_dssp HTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEES------ST---TSCEEEEEEEEEEEECSHHHH
T ss_pred HHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEE------CC---CCcEEEEEeCccEEEecCccC
Confidence 34444446799999999999999987 8899998742 10 1234689998 9999999753
No 167
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.56 E-value=2.2e-07 Score=94.09 Aligned_cols=36 Identities=28% Similarity=0.539 Sum_probs=33.0
Q ss_pred CcccEEEECCCHHHHHHHHHhhc-CCCCeEEEEeccCC
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSK-NPNIQIAIIEQSVS 125 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~-~~G~~V~llEk~~~ 125 (356)
.+||+||||+|++|+.+|.+|++ . +.+|+|||++..
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~-~~~v~~~e~g~~ 59 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENP-KIKVLVIEKGFY 59 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTST-TCCEEEEESSCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCC-CCcEEEEecCCc
Confidence 35999999999999999999999 6 999999999853
No 168
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.55 E-value=1.1e-07 Score=91.20 Aligned_cols=108 Identities=15% Similarity=0.160 Sum_probs=69.3
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEec
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 168 (356)
.+..|+|||||+||+++|..|... +.+|+|+|+.+..+. ... ....++.. ....... ..+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~-~~~itlie~~~~~~y---~~~----------~l~~~l~g-~~~~~~l-----~~~ 67 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGK-CDDITMINSEKYLPY---YRP----------RLNEIIAK-NKSIDDI-----LIK 67 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTT-CSCEEEECSSSSCCB---CGG----------GHHHHHHS-CCCGGGT-----BSS
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCC-CCEEEEEECCCCCCc---ccC----------hhhHHHcC-CCCHHHc-----cCC
Confidence 357899999999999999999666 999999999876441 100 00111110 0111100 001
Q ss_pred hHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
.. +.+. +.|++++++++|+.+..++.. |.+. +..++.+|+||+|||+.
T Consensus 68 ~~-------~~~~-~~~i~~~~~~~V~~id~~~~~---v~~~--------------~g~~~~yd~lvlAtG~~ 115 (385)
T 3klj_A 68 KN-------DWYE-KNNIKVITSEFATSIDPNNKL---VTLK--------------SGEKIKYEKLIIASGSI 115 (385)
T ss_dssp CH-------HHHH-HTTCEEECSCCEEEEETTTTE---EEET--------------TSCEEECSEEEECCCEE
T ss_pred CH-------HHHH-HCCCEEEeCCEEEEEECCCCE---EEEC--------------CCCEEECCEEEEecCCC
Confidence 11 1122 469999999999999776653 3333 23679999999999964
No 169
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.55 E-value=2.7e-07 Score=89.82 Aligned_cols=109 Identities=15% Similarity=0.199 Sum_probs=67.5
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCC--eEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEe
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIK 167 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~--~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~ 167 (356)
.+||+|||||++|+++|..|++. |. +|+|+|+........ ....+.+... ...... . ..
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~-g~~~~V~lie~~~~~~~~~----~~l~~~~~~~---------~~~~~~---~--~~ 64 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRAS-GWEGNIRLVGDATVIPHHL----PPLSKAYLAG---------KATAES---L--YL 64 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSCCSCCBCS----GGGGTTTTTT---------CSCSGG---G--BS
T ss_pred CCcEEEEcCHHHHHHHHHHHHcc-CcCCCEEEEECCCCCCCcC----CCCcHHHhCC---------CCChHH---h--cc
Confidence 48999999999999999999998 87 899999976432110 0000000000 000000 0 00
Q ss_pred chHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 168 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 168 ~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
. +.+.+. +.|++++.+++|+.+..++.. +.+.+ ..++.+|.||+|||...
T Consensus 65 ~-------~~~~~~-~~gv~~~~~~~v~~i~~~~~~---v~~~~--------------g~~~~~d~lviAtG~~p 114 (431)
T 1q1r_A 65 R-------TPDAYA-AQNIQLLGGTQVTAINRDRQQ---VILSD--------------GRALDYDRLVLATGGRP 114 (431)
T ss_dssp S-------CHHHHH-HTTEEEECSCCEEEEETTTTE---EEETT--------------SCEEECSEEEECCCEEE
T ss_pred c-------CHHHHH-hCCCEEEeCCEEEEEECCCCE---EEECC--------------CCEEECCEEEEcCCCCc
Confidence 0 011222 468999999999988765543 33321 35799999999999754
No 170
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.54 E-value=1.1e-07 Score=91.02 Aligned_cols=108 Identities=16% Similarity=0.222 Sum_probs=65.9
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCC--CeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEe
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPN--IQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIK 167 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G--~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~ 167 (356)
++||+|||||++|+++|+.|++. | .+|+|+|+.. | +.+.+...... +... .
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~-g~~~~V~lie~~~--g-------~~~~~~~l~~~---------~~~~--------~ 56 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKL-DGETPLLMITADD--G-------RSYSKPMLSTG---------FSKN--------K 56 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTT-CSSSCEEEECSSC--C-------CEECGGGGGGT---------TTTT--------C
T ss_pred CCcEEEECChHHHHHHHHHHHhh-CCCCCEEEEECCC--C-------CccCcccccHH---------HhCC--------C
Confidence 48999999999999999999998 7 5699999874 1 11111111000 0000 0
Q ss_pred chHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 168 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 168 ~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
....+.....+.+.++.|++++.+++++.+..++..+ .+. ..++.+|.+|+|||...
T Consensus 57 ~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v---~~~---------------~~~~~~d~lviAtG~~p 113 (384)
T 2v3a_A 57 DADGLAMAEPGAMAEQLNARILTHTRVTGIDPGHQRI---WIG---------------EEEVRYRDLVLAWGAEP 113 (384)
T ss_dssp CHHHHEEECHHHHHHHTTCEEECSCCCCEEEGGGTEE---EET---------------TEEEECSEEEECCCEEE
T ss_pred CHHHhhccCHHHHHHhCCcEEEeCCEEEEEECCCCEE---EEC---------------CcEEECCEEEEeCCCCc
Confidence 0111111112222235689999998888886544432 222 24699999999999643
No 171
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.53 E-value=4.7e-08 Score=96.62 Aligned_cols=41 Identities=37% Similarity=0.637 Sum_probs=37.9
Q ss_pred CcccEEEECCCHHHHHHHHHhhc-CCCCeEEEEeccCCCCCcc
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSK-NPNIQIAIIEQSVSPGGGA 130 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~-~~G~~V~llEk~~~~Gg~~ 130 (356)
.++||||||||++||+||+.|++ . |++|+|+|++..+||.+
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~-G~~V~VlE~~~~~GG~~ 50 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQID-GPSWMIVDSNETPGGLA 50 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHC-CSCEEEEESSSSCCGGG
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhC-CCCEEEEECCCCCcCCe
Confidence 46999999999999999999997 6 99999999999999865
No 172
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.53 E-value=7.5e-08 Score=95.31 Aligned_cols=112 Identities=15% Similarity=0.158 Sum_probs=69.0
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCC---CeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEE
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPN---IQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVI 166 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G---~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~ 166 (356)
++||+|||||++|+++|..|++. | .+|+|||+....+...+ .+ ..++...-..+.. ..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-g~~~~~V~lie~~~~~~~~~~---~~----------~~~~~~~~~~~~~---~~-- 95 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-YGDANEIVVFDQNSNISFLGA---GM----------ALWIGEQIAGPEG---LF-- 95 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-HGGGSEEEEECSSSCCSBCGG---GH----------HHHHTTSSSCSGG---GB--
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-CCCCCeEEEEECCCCCCcccc---cc----------chhhcCccCCHHH---hh--
Confidence 58999999999999999999997 6 99999999875431110 00 0011100000100 00
Q ss_pred echHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 167 KHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 167 ~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
.. +.+.+. +.|++++.+++|+.+..+++.+. +.. + ++..++++|+||+|||...
T Consensus 96 ~~-------~~~~~~-~~gv~v~~~~~v~~i~~~~~~v~-v~~-~------------g~~~~~~~d~lviAtG~~p 149 (490)
T 2bc0_A 96 YS-------DKEELE-SLGAKVYMESPVQSIDYDAKTVT-ALV-D------------GKNHVETYDKLIFATGSQP 149 (490)
T ss_dssp SC-------CHHHHH-HTTCEEETTCCEEEEETTTTEEE-EEE-T------------TEEEEEECSEEEECCCEEE
T ss_pred hc-------CHHHHH-hCCCEEEeCCEEEEEECCCCEEE-EEe-C------------CcEEEEECCEEEECCCCCc
Confidence 00 011222 46899999999998876665443 210 1 0135799999999999643
No 173
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.52 E-value=2.9e-07 Score=87.74 Aligned_cols=106 Identities=19% Similarity=0.197 Sum_probs=65.3
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
..||+|||||++|+++|..|++. | +|+|+|+....+ +....+ . ..+. -.+.++... ...
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~-g-~V~lie~~~~~~---~~~~~l-~---------~~~~-g~~~~~~~~-----~~~ 66 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQT-Y-EVTVIDKEPVPY---YSKPML-S---------HYIA-GFIPRNRLF-----PYS 66 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTT-S-EEEEECSSSSCC---CCSTTH-H---------HHHT-TSSCGGGGC-----SSC
T ss_pred CCcEEEECCcHHHHHHHHHHhhc-C-CEEEEECCCCCc---cccchh-H---------HHHh-CCCCHHHhc-----cCC
Confidence 46999999999999999999999 8 999999986432 111000 0 1110 001111100 010
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
. .+ + ++.|++++.+++|+.+..++..+. . +..++.+|++|+|||+..
T Consensus 67 ~----~~---~-~~~~v~~~~g~~v~~id~~~~~V~---~---------------~g~~~~~d~lViATGs~p 113 (367)
T 1xhc_A 67 L----DW---Y-RKRGIEIRLAEEAKLIDRGRKVVI---T---------------EKGEVPYDTLVLATGARA 113 (367)
T ss_dssp H----HH---H-HHHTEEEECSCCEEEEETTTTEEE---E---------------SSCEEECSEEEECCCEEE
T ss_pred H----HH---H-HhCCcEEEECCEEEEEECCCCEEE---E---------------CCcEEECCEEEECCCCCC
Confidence 1 11 1 235899999988888865443322 1 135799999999999643
No 174
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.52 E-value=1e-07 Score=95.73 Aligned_cols=114 Identities=14% Similarity=0.064 Sum_probs=69.1
Q ss_pred ccEEEECCCHHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 91 TDVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~-~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
.||+|||||++|+++|+.|++. ++.+|+|+|+.+.++. ....++ .++ .+ .+...... ....
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~---~~~~l~----------~~~--~~-~~~~~~~~-~~~~- 63 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSF---ANCGLP----------YHI--SG-EIAQRSAL-VLQT- 63 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSB---CGGGHH----------HHH--TS-SSCCGGGG-BCCC-
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccc---cccCch----------HHh--cC-CcCChHHh-hccC-
Confidence 4899999999999999999984 3789999999976541 110000 000 01 00000000 0001
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
.+.+.++.+++++++++|+++..+++.+...... +++..++.+|+||+|||..
T Consensus 64 -------~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~~~------------~g~~~~~~~d~lviAtG~~ 116 (565)
T 3ntd_A 64 -------PESFKARFNVEVRVKHEVVAIDRAAKLVTVRRLL------------DGSEYQESYDTLLLSPGAA 116 (565)
T ss_dssp -------HHHHHHHHCCEEETTEEEEEEETTTTEEEEEETT------------TCCEEEEECSEEEECCCEE
T ss_pred -------HHHHHHhcCcEEEECCEEEEEECCCCEEEEEecC------------CCCeEEEECCEEEECCCCC
Confidence 1112223589999999999997766654322111 1124579999999999964
No 175
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.51 E-value=1.2e-07 Score=92.72 Aligned_cols=114 Identities=18% Similarity=0.168 Sum_probs=67.8
Q ss_pred ccEEEECCCHHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 91 TDVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~-~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
+||+|||||++|+++|+.|++. +|.+|+|||+....+. ....+. .++...-..+...
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~---~~~~~~----------~~~~~~~~~~~~~--------- 58 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISF---LSAGMQ----------LYLEGKVKDVNSV--------- 58 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSB---CGGGHH----------HHHTTSSCCGGGS---------
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCc---ccccch----------hhhcCccCCHHHh---------
Confidence 3899999999999999999983 3899999999875441 110000 0110000001110
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
...+.+.+. +.|++++.++.++.+..+++.+. +... . +++..++++|++|+|||...
T Consensus 59 ---~~~~~~~~~-~~gv~~~~~~~v~~i~~~~~~v~-~~~~--------~---~g~~~~~~~d~lviAtG~~p 115 (447)
T 1nhp_A 59 ---RYMTGEKME-SRGVNVFSNTEITAIQPKEHQVT-VKDL--------V---SGEERVENYDKLIISPGAVP 115 (447)
T ss_dssp ---BSCCHHHHH-HTTCEEEETEEEEEEETTTTEEE-EEET--------T---TCCEEEEECSEEEECCCEEE
T ss_pred ---hcCCHHHHH-HCCCEEEECCEEEEEeCCCCEEE-EEec--------C---CCceEEEeCCEEEEcCCCCc
Confidence 000112222 35899999999998876665443 2110 0 01224589999999999643
No 176
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.51 E-value=4e-07 Score=89.00 Aligned_cols=114 Identities=11% Similarity=0.080 Sum_probs=68.4
Q ss_pred ccEEEECCCHHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCC-C-ccccCCeEEEe
Q 018414 91 TDVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGI-D-YDEQDNYVVIK 167 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~-~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~-~-~~~~~~~~~~~ 167 (356)
+||+|||||++|+++|+.|++. +|.+|+|||+...++...+ .+. .++. +. . ++.. ..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~---~~~----------~~~~--g~~~~~~~~-~~---- 60 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSC---GIA----------LYLG--KEIKNNDPR-GL---- 60 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGG---GHH----------HHHT--TCBGGGCGG-GG----
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccc---cch----------hhhc--CCcccCCHH-Hh----
Confidence 5899999999999999999983 4899999999875431110 000 0110 00 0 0000 00
Q ss_pred chHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 168 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 168 ~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
...+.+.+. +.|++++.+++++.+..+++.+. +... . +++..++++|++|+|||...
T Consensus 61 -----~~~~~~~~~-~~gv~~~~~~~v~~i~~~~~~v~-v~~~--------~---~g~~~~~~~d~lviAtGs~p 117 (452)
T 2cdu_A 61 -----FYSSPEELS-NLGANVQMRHQVTNVDPETKTIK-VKDL--------I---TNEEKTEAYDKLIMTTGSKP 117 (452)
T ss_dssp -----BSCCHHHHH-HTTCEEEESEEEEEEEGGGTEEE-EEET--------T---TCCEEEEECSEEEECCCEEE
T ss_pred -----hhcCHHHHH-HcCCEEEeCCEEEEEEcCCCEEE-EEec--------C---CCceEEEECCEEEEccCCCc
Confidence 000111222 46899999999998876665443 2110 0 01236799999999999643
No 177
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.47 E-value=2.8e-07 Score=89.72 Aligned_cols=105 Identities=18% Similarity=0.337 Sum_probs=66.6
Q ss_pred ccEEEECCCHHHHHHHHHhhc---CCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEe
Q 018414 91 TDVVVVGAGSAGLSCAYELSK---NPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIK 167 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~---~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~ 167 (356)
.||+|||||++|+++|+.|++ . |.+|+|||+.+... + .+...++.. |..
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~-g~~Vtlie~~~~~~---~------------~~~~~~~~~-g~~----------- 56 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGS-GHEVTLISANDYFQ---F------------VPSNPWVGV-GWK----------- 56 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGG-GSEEEEECSSSEEE---C------------GGGHHHHHH-TSS-----------
T ss_pred CcEEEECCcHHHHHHHHHHhccCCC-cCEEEEEeCCCCCc---c------------cCCcccccc-Ccc-----------
Confidence 699999999999999999999 7 99999999986321 0 000011100 100
Q ss_pred chHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 168 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 168 ~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
...++...+.+.+ ++.|++++.+ +|+.+..++.. |.+. +..++.+|+||+|+|...
T Consensus 57 ~~~~~~~~l~~~~-~~~gv~~~~~-~v~~id~~~~~---V~~~--------------~g~~i~~d~lviAtG~~~ 112 (437)
T 3sx6_A 57 ERDDIAFPIRHYV-ERKGIHFIAQ-SAEQIDAEAQN---ITLA--------------DGNTVHYDYLMIATGPKL 112 (437)
T ss_dssp CHHHHEEECHHHH-HTTTCEEECS-CEEEEETTTTE---EEET--------------TSCEEECSEEEECCCCEE
T ss_pred CHHHHHHHHHHHH-HHCCCEEEEe-EEEEEEcCCCE---EEEC--------------CCCEEECCEEEECCCCCc
Confidence 1111111222333 3679999864 88888765553 3333 135799999999999643
No 178
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.46 E-value=1.9e-06 Score=82.91 Aligned_cols=98 Identities=23% Similarity=0.329 Sum_probs=76.5
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|.+. |.+|+++|+.+.+.... ...
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtvv~~~~~~~~~~-------------------------------------~~~ 184 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAK-GLEVDVVELAPRVMARV-------------------------------------VTP 184 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSTTTTT-------------------------------------SCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCCcchhhc-------------------------------------cCH
Confidence 5799999999999999999999 99999999886432100 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
.+.+.+.+.+. +.|++++++++|+++..+++++.++.+.+ +.++.+|.||+|+|..
T Consensus 185 ~~~~~l~~~l~-~~GV~i~~~~~v~~i~~~~~~v~~V~~~d--------------G~~i~aD~Vv~a~G~~ 240 (404)
T 3fg2_P 185 EISSYFHDRHS-GAGIRMHYGVRATEIAAEGDRVTGVVLSD--------------GNTLPCDLVVVGVGVI 240 (404)
T ss_dssp HHHHHHHHHHH-HTTCEEECSCCEEEEEEETTEEEEEEETT--------------SCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHH-hCCcEEEECCEEEEEEecCCcEEEEEeCC--------------CCEEEcCEEEECcCCc
Confidence 33444445454 67999999999999998888888888753 3679999999999944
No 179
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.45 E-value=6.7e-08 Score=94.87 Aligned_cols=39 Identities=33% Similarity=0.504 Sum_probs=35.9
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCC
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGG 128 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg 128 (356)
..+||+|||||++|+++|+.|++. |++|+|+|+...+||
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-G~~V~v~e~~~~~GG 159 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-GYEVHVYDRYDRMGG 159 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeccCCCCC
Confidence 358999999999999999999999 999999999987765
No 180
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.43 E-value=7.9e-08 Score=92.66 Aligned_cols=109 Identities=18% Similarity=0.183 Sum_probs=66.6
Q ss_pred ccEEEECCCHHHHHHHHHhhc---CCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEe
Q 018414 91 TDVVVVGAGSAGLSCAYELSK---NPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIK 167 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~---~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~ 167 (356)
.||+|||||++|+++|+.|++ . |.+|+|||+....+... .... ..........+. .
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~-g~~V~vie~~~~~~~~~----~~~~--------------~~~~~~~~~~~~--~ 60 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGS-KADVKVINKSRFSYFRP----ALPH--------------VAIGVRDVDELK--V 60 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGG-GSEEEEEESSSEEEECC----SSCC--------------CCSSCCCCCCEE--E
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCC-CCeEEEEeCCCCceecc----chhh--------------cccCCcCHHHHH--H
Confidence 379999999999999999999 7 99999999987432110 0000 000000001111 1
Q ss_pred chHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 168 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 168 ~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
. +.+.+ ++.|++++.+ +|+.+..++..+ .+.+ . .++..++.+|.||+|+|...
T Consensus 61 ~-------~~~~~-~~~gv~~~~~-~v~~i~~~~~~V---~~~~------g----~~~~~~~~~d~lViAtG~~~ 113 (409)
T 3h8l_A 61 D-------LSEAL-PEKGIQFQEG-TVEKIDAKSSMV---YYTK------P----DGSMAEEEYDYVIVGIGAHL 113 (409)
T ss_dssp E-------HHHHT-GGGTCEEEEC-EEEEEETTTTEE---EEEC------T----TSCEEEEECSEEEECCCCEE
T ss_pred H-------HHHHH-hhCCeEEEEe-eEEEEeCCCCEE---EEcc------C----CcccceeeCCEEEECCCCCc
Confidence 1 12222 3568999988 888887655543 2321 0 01235699999999999743
No 181
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.42 E-value=4.5e-07 Score=87.58 Aligned_cols=105 Identities=19% Similarity=0.168 Sum_probs=67.2
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCC--eEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEe
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIK 167 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~--~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~ 167 (356)
++||+|||||++|+++|+.|++. |. +|+|+|+....+. .. ....+ .++... . .+. ..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-g~~~~V~lie~~~~~~~---~~-~~~~~--------~~~~~~-~-~~~---~~--- 65 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQA-GYQGLITVVGDEAERPY---DR-PPLSK--------DFMAHG-D-AEK---IR--- 65 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHH-TCCSCEEEEESSCSCCB---CS-GGGGT--------HHHHHC-C-GGG---SB---
T ss_pred CCcEEEECChHHHHHHHHHHHcc-CCCCeEEEEECCCCCcc---cC-CCCCH--------HHhCCC-c-hhh---hh---
Confidence 58999999999999999999998 77 5999999865331 10 00000 111110 0 100 00
Q ss_pred chHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 168 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 168 ~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
++. .++.|++++.+++|+.+..++.. +.+.+ ..++.+|+||+|||...
T Consensus 66 ---------~~~-~~~~~v~~~~~~~v~~i~~~~~~---v~~~~--------------g~~~~~d~lviAtG~~~ 113 (408)
T 2gqw_A 66 ---------LDC-KRAPEVEWLLGVTAQSFDPQAHT---VALSD--------------GRTLPYGTLVLATGAAP 113 (408)
T ss_dssp ---------CCC-TTSCSCEEEETCCEEEEETTTTE---EEETT--------------SCEEECSEEEECCCEEE
T ss_pred ---------HHH-HHHCCCEEEcCCEEEEEECCCCE---EEECC--------------CCEEECCEEEECCCCCC
Confidence 001 23679999999989988655443 33321 35799999999999643
No 182
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.41 E-value=1.5e-06 Score=84.75 Aligned_cols=98 Identities=27% Similarity=0.365 Sum_probs=72.6
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
..+++|||+|++|+.+|..|++. |.+|+|+|+.+.+.... ..
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~~-------------------------------------~~ 190 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKA-GKKVTVIDILDRPLGVY-------------------------------------LD 190 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSTTTTT-------------------------------------CC
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCeEEEEecCccccccc-------------------------------------CC
Confidence 47999999999999999999999 99999999986432100 01
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
.++.+.+.+.+. +.|++++++++|+++..+ +++..+... ..++.+|.||+|+|...
T Consensus 191 ~~~~~~l~~~l~-~~gv~i~~~~~v~~i~~~-~~v~~v~~~---------------~~~i~~d~vi~a~G~~p 246 (447)
T 1nhp_A 191 KEFTDVLTEEME-ANNITIATGETVERYEGD-GRVQKVVTD---------------KNAYDADLVVVAVGVRP 246 (447)
T ss_dssp HHHHHHHHHHHH-TTTEEEEESCCEEEEECS-SBCCEEEES---------------SCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHH-hCCCEEEcCCEEEEEEcc-CcEEEEEEC---------------CCEEECCEEEECcCCCC
Confidence 334445555554 679999999999998754 444444432 25799999999999543
No 183
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.41 E-value=2.7e-07 Score=94.85 Aligned_cols=39 Identities=31% Similarity=0.537 Sum_probs=36.0
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGG 129 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~ 129 (356)
.+||+|||||++|+.+|+.|++. |++|+|+|+...+||.
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~-g~~V~lie~~~~~gg~ 411 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAAR-GHQVTLFDAHSEIGGQ 411 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSSCTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCCCCe
Confidence 58999999999999999999999 9999999999877764
No 184
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.41 E-value=1.9e-07 Score=91.40 Aligned_cols=41 Identities=29% Similarity=0.361 Sum_probs=38.3
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~ 130 (356)
.++||||||+|++||++|+.|+++ |++|+|+|++..+||.+
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~-G~~V~vlE~~~~~GG~~ 50 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVD-GKKVLHIDKQDHYGGEA 50 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCGGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCCCCCccc
Confidence 368999999999999999999999 99999999999998764
No 185
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.40 E-value=4.3e-06 Score=77.14 Aligned_cols=101 Identities=18% Similarity=0.230 Sum_probs=75.3
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+-+|..|++. |.+|+++++...+.. ..
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~~~----------------------------------------~~ 184 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNI-ASEVHLIHRRDGFRA----------------------------------------EK 184 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSSSCCC----------------------------------------CH
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCeEEEEEeCCcccc----------------------------------------CH
Confidence 5799999999999999999999 999999998753210 02
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
.+.+.+.+.+. +.|++++++++++++..+++++.++.+.+. .+ .++..++.+|.||+|+|..
T Consensus 185 ~~~~~l~~~l~-~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~------~~--~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 185 ILIKRLMDKVE-NGNIILHTNRTLEEVTGDQMGVTGVRLRDT------QN--SDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp HHHHHHHHHHH-TSSEEEECSCEEEEEEECSSSEEEEEEECC------TT--CCCCEEEECSEEEECSCEE
T ss_pred HHHHHHHHhcc-cCCeEEEcCceeEEEEcCCCceEEEEEEec------cC--CCceEEEEcCEEEEEeCCC
Confidence 23334455554 679999999999999877767777776420 00 0234689999999999944
No 186
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.39 E-value=6.2e-07 Score=89.07 Aligned_cols=35 Identities=23% Similarity=0.330 Sum_probs=32.9
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~ 125 (356)
+||++|||+|++|+.+|++|++. |.+|+|||++..
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~-~~~v~~~e~~~~ 39 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEA-GVQTLMLEMGQL 39 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCCCC
Confidence 59999999999999999999998 999999999863
No 187
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.38 E-value=3.8e-07 Score=87.86 Aligned_cols=106 Identities=19% Similarity=0.236 Sum_probs=65.5
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCC--eEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEec
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 168 (356)
.||+|||||++|+++|+.|++. |. +|+|+|+.+...... ..+...++.. .... ..+ ...
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~-g~~~~V~lie~~~~~~y~~---~~l~~~~l~~----------~~~~---~~~--~~~ 62 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQA-KYPGRIALINDEKHLPYQR---PPLSKAYLKS----------GGDP---NSL--MFR 62 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCSCEEEECCSSSSSBCS---GGGGTGGGGS----------CCCT---TSS--BSS
T ss_pred CCEEEEcChHHHHHHHHHHHhh-CcCCCEEEEeCCCCCCCCC---ccCCHHHHCC----------CCCH---HHc--cCC
Confidence 4899999999999999999998 88 899999987433110 0011000000 0000 000 001
Q ss_pred hHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
.. +.+. +.+++++. ++|+.+..++.. +.+. +..++.+|.+|+|||..
T Consensus 63 ~~-------~~~~-~~~i~~~~-~~v~~id~~~~~---v~~~--------------~g~~~~~d~lvlAtG~~ 109 (404)
T 3fg2_P 63 PE-------KFFQ-DQAIELIS-DRMVSIDREGRK---LLLA--------------SGTAIEYGHLVLATGAR 109 (404)
T ss_dssp CH-------HHHH-HTTEEEEC-CCEEEEETTTTE---EEES--------------SSCEEECSEEEECCCEE
T ss_pred CH-------HHHH-hCCCEEEE-EEEEEEECCCCE---EEEC--------------CCCEEECCEEEEeeCCC
Confidence 11 1122 46899999 889988765553 3332 13678999999999964
No 188
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.38 E-value=2.9e-07 Score=88.92 Aligned_cols=106 Identities=18% Similarity=0.266 Sum_probs=67.0
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCe--EEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEec
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQ--IAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~--V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 168 (356)
.||+|||||++|+++|+.|++. |.+ |+|+|+.+..+.. ...+.. .++. ...... .. .+
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~-g~~~~V~li~~~~~~~y~---~~~l~~---------~~~~-g~~~~~---~~---~~ 62 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAE-GFEGRISLIGDEPHLPYD---RPSLSK---------AVLD-GSLERP---PI---LA 62 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCSEEEEEECSSSSSBC---SGGGGT---------HHHH-TSSSSC---CB---SS
T ss_pred CCEEEEcccHHHHHHHHHHHcc-CcCCeEEEEECCCCCCcC---CccccH---------HHhC-CCCCHH---Hh---cC
Confidence 4899999999999999999998 877 9999998754311 000000 0111 011110 11 11
Q ss_pred hHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
...+ + ++.+++++.+++|+.+..++.. +.+. +..++.+|.+|+|||+.
T Consensus 63 ~~~~-------~-~~~~i~~~~~~~v~~id~~~~~---v~~~--------------~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 63 EADW-------Y-GEARIDMLTGPEVTALDVQTRT---ISLD--------------DGTTLSADAIVIATGSR 110 (410)
T ss_dssp CTTH-------H-HHTTCEEEESCCEEEEETTTTE---EEET--------------TSCEEECSEEEECCCEE
T ss_pred CHHH-------H-HHCCCEEEeCCEEEEEECCCCE---EEEC--------------CCCEEECCEEEEccCCc
Confidence 1111 1 1458999999999998765543 2332 13579999999999965
No 189
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.36 E-value=4.4e-06 Score=79.74 Aligned_cols=98 Identities=19% Similarity=0.210 Sum_probs=73.2
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-+++|||+|..|+.+|..|++. |.+|+++|+.+.+.... ...
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~~~~~-------------------------------------~~~ 187 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSG-GYQLDVVAPCEQVMPGL-------------------------------------LHP 187 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSSSTTT-------------------------------------SCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEecCcchhhcc-------------------------------------cCH
Confidence 5799999999999999999999 99999999976432100 013
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
.+.+.+.+.+. +.|++++++++|+++..+++.+ .+.+.+ +.++.+|.||+|+|...
T Consensus 188 ~~~~~l~~~l~-~~gv~i~~~~~v~~i~~~~~~~-~v~~~~--------------g~~i~~d~vv~a~G~~p 243 (384)
T 2v3a_A 188 AAAKAVQAGLE-GLGVRFHLGPVLASLKKAGEGL-EAHLSD--------------GEVIPCDLVVSAVGLRP 243 (384)
T ss_dssp HHHHHHHHHHH-TTTCEEEESCCEEEEEEETTEE-EEEETT--------------SCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHH-HcCCEEEeCCEEEEEEecCCEE-EEEECC--------------CCEEECCEEEECcCCCc
Confidence 33445555554 6799999999999998776643 344431 36799999999999543
No 190
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.35 E-value=3.5e-07 Score=88.29 Aligned_cols=41 Identities=29% Similarity=0.558 Sum_probs=37.6
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCC-CeEEEEeccCCCCCcc
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPN-IQIAIIEQSVSPGGGA 130 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G-~~V~llEk~~~~Gg~~ 130 (356)
.++||+|||||++||+||+.|++. | .+|+|+|+...+||.+
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~-g~~~v~v~E~~~~~GG~~ 46 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA-GFHDYTILERTDHVGGKC 46 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSSCSSTTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEECCCCCCCcc
Confidence 358999999999999999999999 9 9999999999888754
No 191
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.34 E-value=9.2e-07 Score=85.84 Aligned_cols=104 Identities=26% Similarity=0.384 Sum_probs=65.3
Q ss_pred ccEEEECCCHHHHHHHHHhhc--CCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEec
Q 018414 91 TDVVVVGAGSAGLSCAYELSK--NPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~--~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 168 (356)
+||+|||||++|+++|+.|++ . |.+|+|||+.+..+... ...++. .+... . ......
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~-g~~Vtlie~~~~~~~~~---------------~~~~~~-~g~~~-~-~~~~~~-- 61 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMP-DLKITLISDRPYFGFTP---------------AFPHLA-MGWRK-F-EDISVP-- 61 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-TCEEEEECSSSEEECGG---------------GHHHHH-HTCSC-G-GGSEEE--
T ss_pred CCEEEECccHHHHHHHHHHHcCCC-CCeEEEECCCCCCCcCC---------------Ccchhc-cCccC-H-HHHHHH--
Confidence 699999999999999999999 7 89999999986543210 001111 11100 0 001100
Q ss_pred hHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
+.+ ..++.|++++.+ +++.+..++.. +.+. +..++.+|.||+|+|..
T Consensus 62 -------~~~-~~~~~gv~~~~~-~v~~id~~~~~---v~~~--------------~g~~i~~d~liiAtG~~ 108 (430)
T 3h28_A 62 -------LAP-LLPKFNIEFINE-KAESIDPDANT---VTTQ--------------SGKKIEYDYLVIATGPK 108 (430)
T ss_dssp -------STT-TGGGGTEEEECS-CEEEEETTTTE---EEET--------------TCCEEECSEEEECCCCE
T ss_pred -------HHH-HHHhcCCEEEEE-EEEEEECCCCE---EEEC--------------CCcEEECCEEEEcCCcc
Confidence 111 122468999876 78888655443 3332 13568999999999965
No 192
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.33 E-value=2.7e-07 Score=91.77 Aligned_cols=41 Identities=34% Similarity=0.533 Sum_probs=38.0
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCC-CeEEEEeccCCCCCcc
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPN-IQIAIIEQSVSPGGGA 130 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G-~~V~llEk~~~~Gg~~ 130 (356)
..+||+|||||++||+||+.|++. | .+|+|+|+...+||..
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~-G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQN-GIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHT-TCCSEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhc-CCCCEEEEeCCCCCCCce
Confidence 358999999999999999999999 9 9999999999998865
No 193
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.32 E-value=3.9e-06 Score=81.54 Aligned_cols=98 Identities=16% Similarity=0.197 Sum_probs=73.3
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. |.+|+++|+.+.+.... ...
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~-G~~Vtlv~~~~~~l~~~-------------------------------------~~~ 191 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKA-NMHVTLLDTAARVLERV-------------------------------------TAP 191 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSTTTTT-------------------------------------SCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEEeCCccccch-------------------------------------hhH
Confidence 5799999999999999999999 99999999876432100 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEE--eCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIV--KGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~--~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
.+...+.+.+. +.|++++++++++++.. +++++..+.+.+ +.++.+|.||+|+|..
T Consensus 192 ~~~~~l~~~l~-~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~--------------G~~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 192 PVSAFYEHLHR-EAGVDIRTGTQVCGFEMSTDQQKVTAVLCED--------------GTRLPADLVIAGIGLI 249 (431)
T ss_dssp HHHHHHHHHHH-HHTCEEECSCCEEEEEECTTTCCEEEEEETT--------------SCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHH-hCCeEEEeCCEEEEEEeccCCCcEEEEEeCC--------------CCEEEcCEEEECCCCC
Confidence 23334444444 56999999999999987 566776776642 3679999999999944
No 194
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.31 E-value=8.5e-06 Score=79.89 Aligned_cols=102 Identities=13% Similarity=0.114 Sum_probs=72.9
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-+|+|||||..|+.+|..|++. |.+|+|+|+.+.+... ...
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------------------~~~ 210 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRL-GAEVTLIEYMPEILPQ--------------------------------------GDP 210 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSTT--------------------------------------SCH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEEEcCCccccc--------------------------------------cCH
Confidence 5799999999999999999999 9999999998643210 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
++.+.+.+.+. +.|++++++++|+++..+++.+. +.... .. .++..++.+|.||+|+|...
T Consensus 211 ~~~~~l~~~l~-~~gV~i~~~~~v~~i~~~~~~~~-v~~~~------~~---~g~~~~i~~D~vv~a~G~~p 271 (464)
T 2eq6_A 211 ETAALLRRALE-KEGIRVRTKTKAVGYEKKKDGLH-VRLEP------AE---GGEGEEVVVDKVLVAVGRKP 271 (464)
T ss_dssp HHHHHHHHHHH-HTTCEEECSEEEEEEEEETTEEE-EEEEE------TT---CCSCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHH-hcCCEEEcCCEEEEEEEeCCEEE-EEEee------cC---CCceeEEEcCEEEECCCccc
Confidence 33444455554 57999999999999987766543 33320 00 01234799999999999554
No 195
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.30 E-value=5.4e-06 Score=80.92 Aligned_cols=98 Identities=12% Similarity=0.137 Sum_probs=73.3
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.++|||+|..|+.+|..|++. |.+|+++|+.+.+-... ...
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~~-------------------------------------~~~ 191 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQ-NYNVNLIDGHERVLYKY-------------------------------------FDK 191 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSTTTTT-------------------------------------SCH
T ss_pred CeEEEECcCHHHHHHHHHHHhc-CCEEEEEEcCCchhhhh-------------------------------------hhh
Confidence 4799999999999999999999 99999999876421100 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
.+.+.+.+.+. +.|++++++++|+++..+++++..+..+ ..++.+|.||+|+|...
T Consensus 192 ~~~~~l~~~l~-~~Gv~i~~~~~v~~i~~~~~~v~~v~~~---------------g~~i~~D~vv~a~G~~p 247 (452)
T 2cdu_A 192 EFTDILAKDYE-AHGVNLVLGSKVAAFEEVDDEIITKTLD---------------GKEIKSDIAILCIGFRP 247 (452)
T ss_dssp HHHHHHHHHHH-HTTCEEEESSCEEEEEEETTEEEEEETT---------------SCEEEESEEEECCCEEE
T ss_pred hHHHHHHHHHH-HCCCEEEcCCeeEEEEcCCCeEEEEEeC---------------CCEEECCEEEECcCCCC
Confidence 33444455554 6799999999999998767776555431 36799999999999543
No 196
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.30 E-value=3.7e-07 Score=87.93 Aligned_cols=42 Identities=29% Similarity=0.496 Sum_probs=37.8
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAW 131 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~ 131 (356)
++||+|||||++||++|+.|++++|.+|+|+|++..+||.++
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~ 48 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAY 48 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGC
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeee
Confidence 589999999999999999999854899999999998887753
No 197
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.30 E-value=3.4e-07 Score=90.74 Aligned_cols=128 Identities=12% Similarity=0.150 Sum_probs=69.7
Q ss_pred cccEEEECCCHHHHHHHHHhhc-CCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHh---CCCccccCCeEE
Q 018414 90 DTDVVVVGAGSAGLSCAYELSK-NPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDEL---GIDYDEQDNYVV 165 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~-~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~---G~~~~~~~~~~~ 165 (356)
++||+|||||++|+++|..|.+ .++.+|+|||+....+... +.+.+.+............ +++..... . .
T Consensus 11 ~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r----~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~-~-~ 84 (493)
T 1m6i_A 11 HVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMR----PPLSKELWFSDDPNVTKTLRFKQWNGKERS-I-Y 84 (493)
T ss_dssp EEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCS----GGGGTGGGCC--CTHHHHCEEECTTSCEEE-S-B
T ss_pred cCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCC----CCCCHHhhcCCccchhhccccccccccccc-c-c
Confidence 5899999999999999988865 2389999999987554211 1112212111100011111 11100000 0 0
Q ss_pred EechHHHH--HHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 166 IKHAALFT--STIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 166 ~~~~~~~~--~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
+.....+. ..+. .+ .+.|++++.+++|+.+..++.. |.+.+ ..++.+|.||+|||+..
T Consensus 85 ~~~~~~~~~~~~l~-~~-~~~gv~~~~g~~v~~id~~~~~---V~~~~--------------g~~i~yd~lviATGs~p 144 (493)
T 1m6i_A 85 FQPPSFYVSAQDLP-HI-ENGGVAVLTGKKVVQLDVRDNM---VKLND--------------GSQITYEKCLIATGGTP 144 (493)
T ss_dssp SSCGGGSBCTTTTT-TS-TTCEEEEEETCCEEEEEGGGTE---EEETT--------------SCEEEEEEEEECCCEEE
T ss_pred ccchHhhcchhhhh-hh-hcCCeEEEcCCEEEEEECCCCE---EEECC--------------CCEEECCEEEECCCCCC
Confidence 00000000 0111 11 2568999999999988765543 33321 35789999999999643
No 198
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.29 E-value=1.4e-07 Score=92.78 Aligned_cols=38 Identities=34% Similarity=0.565 Sum_probs=34.3
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCC--CeEEEEeccCCCCC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPN--IQIAIIEQSVSPGG 128 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G--~~V~llEk~~~~Gg 128 (356)
.+||+|||+|++|+.+|..|++. | .+|+|+|+.+.++|
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~-g~~~~V~vie~~~~~gg 45 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKH-HSRAHVDIYEKQLVPFG 45 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-CSSCEEEEECSSSSSCT
T ss_pred CceEEEECcCHHHHHHHHHHHhc-CCCCCEEEEeCCCcCCc
Confidence 47999999999999999999997 7 99999999987653
No 199
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.29 E-value=4.5e-06 Score=81.55 Aligned_cols=98 Identities=14% Similarity=0.159 Sum_probs=72.2
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|.+|+.+|..|++. |.+|+|+|+.+.+... ...
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~-g~~V~lv~~~~~~l~~--------------------------------------~~~ 208 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRL-GAEVIVLEYMDRILPT--------------------------------------MDL 208 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTT--------------------------------------SCH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCEEEEEecCCccccc--------------------------------------cCH
Confidence 5799999999999999999999 9999999998642110 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~ 243 (356)
.+.+.+.+.+. +.|++++++++|+++..+++.+. +... +..++.+|.||+|+|....
T Consensus 209 ~~~~~l~~~l~-~~Gv~i~~~~~V~~i~~~~~~v~-v~~~--------------~g~~i~~D~vv~A~G~~p~ 265 (455)
T 2yqu_A 209 EVSRAAERVFK-KQGLTIRTGVRVTAVVPEAKGAR-VELE--------------GGEVLEADRVLVAVGRRPY 265 (455)
T ss_dssp HHHHHHHHHHH-HHTCEEECSCCEEEEEEETTEEE-EEET--------------TSCEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHH-HCCCEEEECCEEEEEEEeCCEEE-EEEC--------------CCeEEEcCEEEECcCCCcC
Confidence 33344445554 56999999999999987766532 3332 1367999999999996543
No 200
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.28 E-value=4.7e-07 Score=88.18 Aligned_cols=40 Identities=40% Similarity=0.659 Sum_probs=37.4
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~ 130 (356)
++||+|||||++||+||+.|++. |++|+|+|++..+||.+
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~GG~~ 44 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKA-GLSVAVIEARDRVGGRT 44 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTTC
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCcEEEEECCCCCCCce
Confidence 58999999999999999999999 99999999998888765
No 201
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.27 E-value=3.3e-07 Score=98.56 Aligned_cols=39 Identities=33% Similarity=0.546 Sum_probs=35.5
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccCCCCCc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSVSPGGG 129 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~~~Gg~ 129 (356)
.+||+|||||++|+++|+.|++. |+ +|+|+|+...+||.
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~-G~~~Vtv~E~~~~~GG~ 226 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARL-GYSDITIFEKQEYVGGL 226 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHT-TCCCEEEEESSSSCSTH
T ss_pred CCEEEEECccHHHHHHHHHHHhc-CCCcEEEEeCCCCCCcc
Confidence 57999999999999999999999 99 79999998777763
No 202
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.27 E-value=3.8e-06 Score=83.39 Aligned_cols=123 Identities=20% Similarity=0.330 Sum_probs=69.0
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhC-CCccccCCeEEEec
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELG-IDYDEQDNYVVIKH 168 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G-~~~~~~~~~~~~~~ 168 (356)
+..|||||||.+|+.+|..|++. +++|+|||+.+.. ++..++.+-. .| ++... . ...
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~-~~~VtLId~~~~~---------~~~PlL~~va-------~G~l~~~~---i--~~p 99 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTK-KYNVSIISPRSYF---------LFTPLLPSAP-------VGTVDEKS---I--IEP 99 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTT-TCEEEEEESSSEE---------ECGGGGGGTT-------TTSSCGGG---G--EEE
T ss_pred CCCEEEECCcHHHHHHHHHhhhC-CCcEEEECCCCCc---------ccccchhHHh-------hccccHHH---h--hhh
Confidence 35799999999999999999998 9999999998531 1111110000 00 00000 0 000
Q ss_pred hHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeec----ccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSM----NHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~----~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
+ ..+. ..++.+++++.+ +|++|..++..|...... ..... +......++..++.+|++|+|+|+..
T Consensus 100 ---~-~~~~--~~~~~~v~~~~~-~v~~ID~~~k~V~l~~~~-~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~ 169 (502)
T 4g6h_A 100 ---I-VNFA--LKKKGNVTYYEA-EATSINPDRNTVTIKSLS-AVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEP 169 (502)
T ss_dssp ---H-HHHH--TTCSSCEEEEEE-EEEEEEGGGTEEEEEEEE-EEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEE
T ss_pred ---H-HHHH--HhhcCCeEEEEE-EEEEEEhhhCEEEEeecc-cceeecccccccccccCCceEEeCCEEEEcCCccc
Confidence 0 1111 123567888876 788887766654321110 00000 00001123467899999999999754
No 203
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.27 E-value=1.5e-06 Score=84.51 Aligned_cols=105 Identities=28% Similarity=0.432 Sum_probs=65.4
Q ss_pred cEEEECCCHHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 92 DVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~-~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
.|||||||++|+++|..|++. ++.+|+|||+.+... + .+...++-.-....+. ... .
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~---------~------~p~l~~v~~g~~~~~~---i~~-~--- 61 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG---------F------TPAFPHLAMGWRKFED---ISV-P--- 61 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE---------C------GGGHHHHHHTCSCGGG---SEE-E---
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc---------c------CccHHHHhcCCCCHHH---hhh-c---
Confidence 699999999999999999884 358999999986311 0 0111111111111111 000 0
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
++.+.++.|++++.+ +|+.|..++..| .+. ++.++.+|++|+|||...
T Consensus 62 ------~~~~~~~~gv~~i~~-~v~~Id~~~~~V---~~~--------------~g~~i~YD~LViAtG~~~ 109 (430)
T 3hyw_A 62 ------LAPLLPKFNIEFINE-KAESIDPDANTV---TTQ--------------SGKKIEYDYLVIATGPKL 109 (430)
T ss_dssp ------STTTGGGGTEEEECS-CEEEEETTTTEE---EET--------------TCCEEECSEEEECCCCEE
T ss_pred ------HHHHHHHCCcEEEEe-EEEEEECCCCEE---EEC--------------CCCEEECCEEEEeCCCCc
Confidence 011223568999887 788887666643 343 236799999999999753
No 204
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.26 E-value=5.1e-06 Score=81.16 Aligned_cols=98 Identities=12% Similarity=0.130 Sum_probs=71.4
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. |.+|+|+|+.+.+... ...
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------------------~~~ 208 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGL-GAKTHLFEMFDAPLPS--------------------------------------FDP 208 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSTT--------------------------------------SCH
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCEEEEEEeCCchhhh--------------------------------------hhH
Confidence 4799999999999999999999 9999999987642110 002
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
.+.+.+.+.+. +.|++++++++|+++..+++....+.+.+ +.++.+|.||+|+|...
T Consensus 209 ~~~~~l~~~l~-~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~--------------g~~i~~D~vv~a~G~~p 265 (450)
T 1ges_A 209 MISETLVEVMN-AEGPQLHTNAIPKAVVKNTDGSLTLELED--------------GRSETVDCLIWAIGREP 265 (450)
T ss_dssp HHHHHHHHHHH-HHSCEEECSCCEEEEEECTTSCEEEEETT--------------SCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHH-HCCCEEEeCCEEEEEEEeCCcEEEEEECC--------------CcEEEcCEEEECCCCCc
Confidence 23344445454 56999999999999987654323344432 34799999999999543
No 205
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.26 E-value=1.1e-05 Score=78.81 Aligned_cols=101 Identities=17% Similarity=0.242 Sum_probs=72.8
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
..+|+|||+|..|+.+|..|++. |.+|+|+|+.+.+... ..
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------------------~~ 210 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANF-GTKVTILEGAGEILSG--------------------------------------FE 210 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSSSTT--------------------------------------SC
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCCccccc--------------------------------------cC
Confidence 35899999999999999999999 9999999998643210 01
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
.++...+.+.+. +.|++++++++++++..+++.+. +.... +++..++.+|.||+|+|...
T Consensus 211 ~~~~~~l~~~l~-~~gv~i~~~~~v~~i~~~~~~~~-v~~~~-----------~g~~~~~~~D~vv~a~G~~p 270 (455)
T 1ebd_A 211 KQMAAIIKKRLK-KKGVEVVTNALAKGAEEREDGVT-VTYEA-----------NGETKTIDADYVLVTVGRRP 270 (455)
T ss_dssp HHHHHHHHHHHH-HTTCEEEESEEEEEEEEETTEEE-EEEEE-----------TTEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHH-HCCCEEEeCCEEEEEEEeCCeEE-EEEEe-----------CCceeEEEcCEEEECcCCCc
Confidence 233344455554 57999999999999987766543 32210 01246799999999999543
No 206
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.25 E-value=8.4e-07 Score=87.34 Aligned_cols=40 Identities=40% Similarity=0.766 Sum_probs=37.5
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~ 130 (356)
.+||+|||||++||++|+.|++. |++|+|+|+...+||..
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~-g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKA-GYKVTVLEARTRPGGRV 50 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeccCCCCCce
Confidence 58999999999999999999999 99999999999988864
No 207
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.22 E-value=1.1e-05 Score=78.72 Aligned_cols=97 Identities=12% Similarity=0.082 Sum_probs=73.8
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.++|||+|..|+.+|..|++. |.+|+++++.+.+.... ...
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~~-------------------------------------~d~ 189 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKM-KKTVHVFESLENLLPKY-------------------------------------FDK 189 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSSSTTT-------------------------------------CCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEEccCcccccc-------------------------------------CCH
Confidence 4799999999999999999999 99999999986432100 013
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
++.+.+.+.+. +.|++++++++|+++..+++++ .+.+. ..++.+|.||+|+|...
T Consensus 190 ~~~~~l~~~l~-~~GV~i~~~~~v~~i~~~~~~v-~v~~~---------------~g~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 190 EMVAEVQKSLE-KQAVIFHFEETVLGIEETANGI-VLETS---------------EQEISCDSGIFALNLHP 244 (452)
T ss_dssp HHHHHHHHHHH-TTTEEEEETCCEEEEEECSSCE-EEEES---------------SCEEEESEEEECSCCBC
T ss_pred HHHHHHHHHHH-HcCCEEEeCCEEEEEEccCCeE-EEEEC---------------CCEEEeCEEEECcCCCC
Confidence 34445555554 7899999999999998777776 45543 13799999999999654
No 208
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.22 E-value=1.2e-05 Score=79.05 Aligned_cols=103 Identities=14% Similarity=0.171 Sum_probs=72.5
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. |.+|+|+|+.+.+.. .+ ..
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~-~~-------------------------------------~~ 224 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRL-GSKVTVVEFQPQIGA-SM-------------------------------------DG 224 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSS-SS-------------------------------------CH
T ss_pred ceEEEECCCHHHHHHHHHHHHc-CCEEEEEEeCCcccc-cc-------------------------------------CH
Confidence 5799999999999999999999 999999999864321 00 12
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEe-CCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
++...+.+.+. +.|++++++++|+++..+ ++....+...+ .. +++..++.+|.||+|+|...
T Consensus 225 ~~~~~l~~~l~-~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~------~~---~g~~~~~~~D~vv~a~G~~p 287 (478)
T 1v59_A 225 EVAKATQKFLK-KQGLDFKLSTKVISAKRNDDKNVVEIVVED------TK---TNKQENLEAEVLLVAVGRRP 287 (478)
T ss_dssp HHHHHHHHHHH-HTTCEEECSEEEEEEEEETTTTEEEEEEEE------TT---TTEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHH-HCCCEEEeCCEEEEEEEecCCCeEEEEEEE------cC---CCCceEEECCEEEECCCCCc
Confidence 33444555554 579999999999999862 33333344321 00 11246799999999999543
No 209
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.21 E-value=1.2e-05 Score=74.43 Aligned_cols=98 Identities=10% Similarity=0.143 Sum_probs=74.4
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
...|+|||+|..|+.+|..|++. |.+|+++++...+..
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~-g~~v~~v~~~~~~~~----------------------------------------- 210 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKY-GSKVFMLVRKDHLRA----------------------------------------- 210 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSSSCCS-----------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCCccCC-----------------------------------------
Confidence 35799999999999999999999 999999998754210
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
...+.+.+.+..|+++++++.++++..+++++.++.+.+ .. .++..++.+|.||+|+|..
T Consensus 211 ---~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~------~~---~g~~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 211 ---STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKN------TK---KNEETDLPVSGLFYAIGHT 270 (338)
T ss_dssp ---CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEE------TT---TTEEEEEECSEEEECSCEE
T ss_pred ---CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEE------CC---CCceEEEEeCEEEEEeCCC
Confidence 112344454456999999999999998877777777642 01 1224679999999999944
No 210
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.21 E-value=8.3e-06 Score=80.52 Aligned_cols=96 Identities=19% Similarity=0.295 Sum_probs=71.0
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. |.+|+|+|+.+.+-... ...
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~l~~~-------------------------------------~~~ 236 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRK-GKEVVLIDVVDTCLAGY-------------------------------------YDR 236 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSTTTTT-------------------------------------SCH
T ss_pred ceEEEECCCHHHHHHHHHHHHC-CCeEEEEEcccchhhhH-------------------------------------HHH
Confidence 5799999999999999999999 99999999986431100 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
++.+.+.+.+. +.|++++++++++++.. ++++..+..+ ..++.+|.||+|+|..
T Consensus 237 ~~~~~l~~~l~-~~GV~i~~~~~v~~i~~-~~~v~~v~~~---------------g~~i~~D~Vi~a~G~~ 290 (490)
T 2bc0_A 237 DLTDLMAKNME-EHGIQLAFGETVKEVAG-NGKVEKIITD---------------KNEYDVDMVILAVGFR 290 (490)
T ss_dssp HHHHHHHHHHH-TTTCEEEETCCEEEEEC-SSSCCEEEES---------------SCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHH-hCCeEEEeCCEEEEEEc-CCcEEEEEEC---------------CcEEECCEEEECCCCC
Confidence 33444555554 67999999999999875 4544444432 3579999999999954
No 211
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.21 E-value=1.3e-05 Score=73.48 Aligned_cols=97 Identities=19% Similarity=0.224 Sum_probs=72.4
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. +.+|+++++.+.+.. .
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~~~---------------------------------------~-- 182 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGI-VEHVTLLEFAPEMKA---------------------------------------D-- 182 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-BSEEEEECSSSSCCS---------------------------------------C--
T ss_pred CEEEEECCCHHHHHHHHHHHHh-CCEEEEEEeCcccCc---------------------------------------c--
Confidence 4799999999999999999999 999999998764210 0
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
..+.+.+.+..|++++++++++++..+++++.++.+.+. . +++..++.+|.||+|+|..
T Consensus 183 ---~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~------~---~g~~~~i~~D~vi~a~G~~ 241 (310)
T 1fl2_A 183 ---QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDR------V---SGDIHNIELAGIFVQIGLL 241 (310)
T ss_dssp ---HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEET------T---TCCEEEEECSEEEECSCEE
T ss_pred ---HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEEC------C---CCcEEEEEcCEEEEeeCCc
Confidence 123344443469999999999999877677777766420 1 1234679999999999843
No 212
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.20 E-value=1e-06 Score=84.78 Aligned_cols=41 Identities=32% Similarity=0.502 Sum_probs=37.9
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAW 131 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~ 131 (356)
++||+|||||++|+++|+.|++. |.+|+|+|+...+||.+.
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~-g~~v~v~E~~~~~GG~~~ 69 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASS-GQRVLIVDRRPHIGGNAY 69 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSSGGGC
T ss_pred CCCEEEECccHHHHHHHHHHHHC-CCceEEEeccCCCCCccc
Confidence 58999999999999999999999 999999999988887653
No 213
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.20 E-value=8.9e-06 Score=80.08 Aligned_cols=96 Identities=20% Similarity=0.269 Sum_probs=72.2
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
..+|+|||+|..|+.+|..|++. |.+|+++|+.+.+... ..
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------------------~~ 226 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVEL-GKKVRMIERNDHIGTI--------------------------------------YD 226 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHT-TCEEEEECCGGGTTSS--------------------------------------SC
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-CCeEEEEEeCCchhhc--------------------------------------CC
Confidence 36899999999999999999999 9999999998643210 01
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
..+.+.+.+.+. +.|++++++++|+++..+ +++..+.+. ..++.+|.||+|+|..
T Consensus 227 ~~~~~~l~~~l~-~~Gv~i~~~~~v~~i~~~-~~v~~v~~~---------------~~~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 227 GDMAEYIYKEAD-KHHIEILTNENVKAFKGN-ERVEAVETD---------------KGTYKADLVLVSVGVK 281 (480)
T ss_dssp HHHHHHHHHHHH-HTTCEEECSCCEEEEEES-SBEEEEEET---------------TEEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHH-HcCcEEEcCCEEEEEEcC-CcEEEEEEC---------------CCEEEcCEEEECcCCC
Confidence 233444555554 579999999999999764 555555542 2579999999999954
No 214
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.20 E-value=1.4e-05 Score=78.29 Aligned_cols=97 Identities=14% Similarity=0.135 Sum_probs=71.3
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. |.+|+++|+.+.+... ...
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~-G~~Vtlv~~~~~~l~~--------------------------------------~~~ 207 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSF-GSEVTVVALEDRLLFQ--------------------------------------FDP 207 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSTT--------------------------------------SCH
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCCccccc--------------------------------------cCH
Confidence 4799999999999999999999 9999999987542110 002
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCe-EEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPN-VMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~-~i~Ak~VI~AtGg~~ 242 (356)
.+...+.+.+. +.|++++++++|+++..+++. ..+.+.+ +. ++.+|.||+|+|...
T Consensus 208 ~~~~~l~~~l~-~~gv~i~~~~~v~~i~~~~~~-~~v~~~~--------------G~~~i~~D~vv~a~G~~p 264 (463)
T 2r9z_A 208 LLSATLAENMH-AQGIETHLEFAVAALERDAQG-TTLVAQD--------------GTRLEGFDSVIWAVGRAP 264 (463)
T ss_dssp HHHHHHHHHHH-HTTCEEESSCCEEEEEEETTE-EEEEETT--------------CCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHH-HCCCEEEeCCEEEEEEEeCCe-EEEEEeC--------------CcEEEEcCEEEECCCCCc
Confidence 22334444454 579999999999999877655 3344432 24 799999999999544
No 215
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.19 E-value=2.5e-05 Score=71.69 Aligned_cols=98 Identities=12% Similarity=0.147 Sum_probs=72.4
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
.-.|+|||+|..|+.+|..|++. |.+|+++++.+.+.. .
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~~~----------------------------------------~ 181 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANI-CKKVYLIHRRDGFRC----------------------------------------A 181 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTT-SSEEEEECSSSSCCS----------------------------------------C
T ss_pred CCEEEEECCCHHHHHHHHHHHhc-CCEEEEEeeCCccCC----------------------------------------C
Confidence 35799999999999999999999 999999998753210 0
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
..+.+.+.++.|+++++++.++++..+++++.++.... .. +++..++.+|.||+|+|..
T Consensus 182 ----~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~------~~---~g~~~~i~~D~vi~a~G~~ 240 (311)
T 2q0l_A 182 ----PITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKN------TA---TNEKRELVVPGFFIFVGYD 240 (311)
T ss_dssp ----HHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEE------TT---TCCEEEEECSEEEECSCEE
T ss_pred ----HHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEe------cC---CCceEEEecCEEEEEecCc
Confidence 11334444457999999999999987767766666531 00 1233579999999999944
No 216
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.19 E-value=1.3e-06 Score=83.53 Aligned_cols=42 Identities=29% Similarity=0.457 Sum_probs=38.5
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEecc-CCCCCccc
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS-VSPGGGAW 131 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~-~~~Gg~~~ 131 (356)
..+||+|||||++||++|+.|++. |++|+|+|+. ..+||.++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~-G~~V~VlE~~~~~vGGr~~ 85 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRA-GHDVTILEANANRVGGRIK 85 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHT-SCEEEEECSCSSCCBTTCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-CCcEEEEeccccccCCcee
Confidence 358999999999999999999999 9999999999 88888654
No 217
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.19 E-value=1.8e-05 Score=77.58 Aligned_cols=98 Identities=20% Similarity=0.268 Sum_probs=71.8
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-+++|||+|..|+.+|..|++..|.+|+++++.+.+.... ...
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~-------------------------------------~~~ 202 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGF-------------------------------------TSK 202 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTT-------------------------------------SCH
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccc-------------------------------------cCH
Confidence 5899999999999999999874378999999875421100 013
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
.+.+.+.+.+. +.|++++++++|+++..+++++. +...+ +.++.+|.||+|+|..
T Consensus 203 ~~~~~l~~~l~-~~GV~i~~~~~v~~i~~~~~~v~-v~~~~--------------g~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 203 SLSQMLRHDLE-KNDVVVHTGEKVVRLEGENGKVA-RVITD--------------KRTLDADLVILAAGVS 257 (472)
T ss_dssp HHHHHHHHHHH-HTTCEEECSCCEEEEEESSSBEE-EEEES--------------SCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHH-hcCCEEEeCCEEEEEEccCCeEE-EEEeC--------------CCEEEcCEEEECCCCC
Confidence 34445555554 67999999999999988677665 43331 3579999999999944
No 218
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.18 E-value=1.8e-05 Score=79.38 Aligned_cols=96 Identities=16% Similarity=0.207 Sum_probs=70.1
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. |.+|+++++.+.+... ...
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------------------~~~ 192 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHL-GIKTTLLELADQVMTP--------------------------------------VDR 192 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSSCTT--------------------------------------SCH
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCcEEEEEcCCccchh--------------------------------------cCH
Confidence 4799999999999999999999 9999999997642110 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEe-------------------CCeEEEEEEcceeeecccCCCCCCCCeEEEc
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVK-------------------GGRVGGVVTNWALVSMNHDTQSCMDPNVMEA 231 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~-------------------~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~A 231 (356)
.+...+.+.+. +.|+++++++.++++..+ ++++. +... ++.++.+
T Consensus 193 ~~~~~l~~~l~-~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~--------------~g~~i~~ 256 (565)
T 3ntd_A 193 EMAGFAHQAIR-DQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLS-LTLS--------------NGELLET 256 (565)
T ss_dssp HHHHHHHHHHH-HTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEE-EEET--------------TSCEEEE
T ss_pred HHHHHHHHHHH-HCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEE-EEEc--------------CCCEEEc
Confidence 33344444444 679999999999999873 44443 2222 1357999
Q ss_pred CEEEEcCCCC
Q 018414 232 KVVVSSCGHD 241 (356)
Q Consensus 232 k~VI~AtGg~ 241 (356)
|.||+|+|..
T Consensus 257 D~vi~a~G~~ 266 (565)
T 3ntd_A 257 DLLIMAIGVR 266 (565)
T ss_dssp SEEEECSCEE
T ss_pred CEEEECcCCc
Confidence 9999999944
No 219
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.18 E-value=1.4e-05 Score=76.94 Aligned_cols=93 Identities=18% Similarity=0.208 Sum_probs=69.0
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. |.+|+++|+.+.+.... ...
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~~-------------------------------------~~~ 187 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTA-GVHVSLVETQPRLMSRA-------------------------------------APA 187 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSSSTTT-------------------------------------SCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEEeCCcccccc-------------------------------------cCH
Confidence 5799999999999999999999 99999999986432100 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
.+...+.+.+. +.|++++++++++++. ++ .+.+.+ +.++.+|.||+|+|..
T Consensus 188 ~~~~~l~~~l~-~~GV~i~~~~~v~~i~--~~---~v~~~~--------------g~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 188 TLADFVARYHA-AQGVDLRFERSVTGSV--DG---VVLLDD--------------GTRIAADMVVVGIGVL 238 (408)
T ss_dssp HHHHHHHHHHH-HTTCEEEESCCEEEEE--TT---EEEETT--------------SCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHH-HcCcEEEeCCEEEEEE--CC---EEEECC--------------CCEEEcCEEEECcCCC
Confidence 33344445554 5799999999999997 44 344432 3679999999999944
No 220
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.17 E-value=1.1e-06 Score=83.58 Aligned_cols=40 Identities=40% Similarity=0.652 Sum_probs=37.3
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccc
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAW 131 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~ 131 (356)
+||+|||||++|+++|+.|+++ |.+|+|+|++..+||.+.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~~~~~GG~~~ 41 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKL-NKKVLVIEKRNHIGGNAY 41 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGG-TCCEEEECSSSSSSGGGC
T ss_pred CCEEEECcCHHHHHHHHHHHhC-CCcEEEEecCCCCCcceE
Confidence 7999999999999999999999 999999999988887753
No 221
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.16 E-value=4.9e-06 Score=80.22 Aligned_cols=97 Identities=15% Similarity=0.147 Sum_probs=71.7
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. |.+|+++|+.+.+-. .. ...
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtvv~~~~~~l~----------~~---------------------------~~~ 185 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKL-GLSVTILEAGDELLV----------RV---------------------------LGR 185 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSH----------HH---------------------------HCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEecCCccch----------hh---------------------------cCH
Confidence 5799999999999999999999 999999998864210 00 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
.+.+.+.+.+. +.|+++++++.++++..++ ++.++.+.+ +.++.+|.||+|+|..
T Consensus 186 ~~~~~l~~~l~-~~GV~i~~~~~v~~i~~~~-~~~~v~~~d--------------g~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 186 RIGAWLRGLLT-ELGVQVELGTGVVGFSGEG-QLEQVMASD--------------GRSFVADSALICVGAE 240 (410)
T ss_dssp HHHHHHHHHHH-HHTCEEECSCCEEEEECSS-SCCEEEETT--------------SCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHH-HCCCEEEeCCEEEEEeccC-cEEEEEECC--------------CCEEEcCEEEEeeCCe
Confidence 33344444444 5699999999999987543 555666642 3679999999999954
No 222
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.15 E-value=1.5e-06 Score=85.90 Aligned_cols=42 Identities=29% Similarity=0.495 Sum_probs=37.9
Q ss_pred CCcccEEEECCCHHHHHHHHHhhcCCC-CeEEEEeccCCCCCcc
Q 018414 88 YADTDVVVVGAGSAGLSCAYELSKNPN-IQIAIIEQSVSPGGGA 130 (356)
Q Consensus 88 ~~~~DVvIIGgG~aGl~aA~~La~~~G-~~V~llEk~~~~Gg~~ 130 (356)
+..+||+|||||++||++|+.|++. | .+|+|+|+...+||.+
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~-g~~~v~v~E~~~~~GG~~ 49 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTEL-GYKNWHLYECNDTPGGLS 49 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESSSSSSGGG
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHc-CCCCEEEEeCCCCCCCee
Confidence 3468999999999999999999999 7 7999999998888765
No 223
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.13 E-value=6.7e-07 Score=87.71 Aligned_cols=39 Identities=23% Similarity=0.416 Sum_probs=34.0
Q ss_pred cccEEEECCCHHHHHHHHHhhc-C-C----CCeEEEEeccCCCCC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSK-N-P----NIQIAIIEQSVSPGG 128 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~-~-~----G~~V~llEk~~~~Gg 128 (356)
.+||+|||||++|+.+|..|++ . + +.+|+|+|+.+.++|
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg 47 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWG 47 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCST
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCC
Confidence 4799999999999999999988 4 2 689999999977664
No 224
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.13 E-value=4.6e-06 Score=79.87 Aligned_cols=102 Identities=20% Similarity=0.171 Sum_probs=62.4
Q ss_pred cEEEECCCHHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCC-CccccCCeEEEech
Q 018414 92 DVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGI-DYDEQDNYVVIKHA 169 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~-~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~-~~~~~~~~~~~~~~ 169 (356)
.|||||||++|+++|.+|++. ++.+|+|||+++.... + ..+. ++- .|. +.+. .. ..
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~----~-p~~~----------~v~-~g~~~~~~---~~--~~- 61 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYT----C-YMSN----------EVI-GGDRELAS---LR--VG- 61 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEEC----S-TTHH----------HHH-HTSSCGGG---GE--EC-
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCC----c-cCHH----------HHh-cCCCCHHH---Hh--hC-
Confidence 599999999999999999874 2579999999863211 0 0000 000 011 1110 00 01
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
++.+. +.|++++.+ +|+.|..++..+ .+. +..++.+|++|+|+|..
T Consensus 62 -------~~~~~-~~gv~~i~~-~v~~id~~~~~v---~~~--------------~g~~i~yd~LviAtG~~ 107 (401)
T 3vrd_B 62 -------YDGLR-AHGIQVVHD-SALGIDPDKKLV---KTA--------------GGAEFAYDRCVVAPGID 107 (401)
T ss_dssp -------SHHHH-HTTCEEECS-CEEEEETTTTEE---EET--------------TSCEEECSEEEECCCEE
T ss_pred -------HHHHH-HCCCEEEEe-EEEEEEccCcEE---Eec--------------ccceeecceeeeccCCc
Confidence 11222 358999887 688887665543 232 24679999999999964
No 225
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.13 E-value=1.5e-05 Score=78.44 Aligned_cols=99 Identities=13% Similarity=0.120 Sum_probs=71.2
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.++|||+|..|+.+|..|++. |.+|+++|+.+.+... ...
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------------------~d~ 226 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGL-GSETHLVIRGETVLRK--------------------------------------FDE 226 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHT-TCEEEEECSSSSSCTT--------------------------------------SCH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCceEEEEeCCccccc--------------------------------------cCH
Confidence 5799999999999999999999 9999999998643210 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCe-EEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGR-VGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
.+.+.+.+.+. +.|++++++++|+++..+++. +..+.+.+ |+ .++.+|.||+|+|...
T Consensus 227 ~~~~~l~~~l~-~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~------------G~-~~i~~D~vv~a~G~~p 285 (479)
T 2hqm_A 227 CIQNTITDHYV-KEGINVHKLSKIVKVEKNVETDKLKIHMND------------SK-SIDDVDELIWTIGRKS 285 (479)
T ss_dssp HHHHHHHHHHH-HHTCEEECSCCEEEEEECC-CCCEEEEETT------------SC-EEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHH-hCCeEEEeCCEEEEEEEcCCCcEEEEEECC------------Cc-EEEEcCEEEECCCCCC
Confidence 33334444444 569999999999999875432 34454431 11 5799999999999543
No 226
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.12 E-value=2.4e-05 Score=76.78 Aligned_cols=104 Identities=15% Similarity=0.140 Sum_probs=72.6
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. |.+|+++|+.+.+.... ...
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~~-------------------------------------~~~ 220 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRL-GADVTAVEFLGHVGGVG-------------------------------------IDM 220 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSCSS-------------------------------------CCH
T ss_pred ceEEEECCCHHHHHHHHHHHHc-CCEEEEEeccCccCCcc-------------------------------------cCH
Confidence 4799999999999999999999 99999999986432100 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
++...+.+.+. +.|++++++++|+++..+++....+.... .. .++..++.+|.||+|+|...
T Consensus 221 ~~~~~l~~~l~-~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~------~~---~~~~~~i~~D~vv~a~G~~p 282 (474)
T 1zmd_A 221 EISKNFQRILQ-KQGFKFKLNTKVTGATKKSDGKIDVSIEA------AS---GGKAEVITCDVLLVCIGRRP 282 (474)
T ss_dssp HHHHHHHHHHH-HTTCEEECSEEEEEEEECTTSCEEEEEEE------TT---SCCCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHH-HCCCEEEeCceEEEEEEcCCceEEEEEEe------cC---CCCceEEEcCEEEECcCCCc
Confidence 33344455554 57999999999999987665412233210 00 11346799999999999543
No 227
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.12 E-value=2.7e-05 Score=72.13 Aligned_cols=98 Identities=16% Similarity=0.249 Sum_probs=72.2
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. |.+|+++++.+.+.. .
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~-g~~V~lv~~~~~~~~----------------------------------------~- 197 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKY-GSKVYIIHRRDAFRA----------------------------------------S- 197 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-SSEEEEECSSSSCCS----------------------------------------C-
T ss_pred CeEEEECCChHHHHHHHHHHhc-CCeEEEEecCCcCCc----------------------------------------c-
Confidence 5799999999999999999999 999999998754210 0
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCC--eEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~--~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
..+.+++.++.|++++++++++++..+++ ++.++.+.+ . .+++..++.+|.||+|+|...
T Consensus 198 ---~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~------~---~~g~~~~i~~D~vi~a~G~~p 259 (333)
T 1vdc_A 198 ---KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKN------V---VTGDVSDLKVSGLFFAIGHEP 259 (333)
T ss_dssp ---HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEE------T---TTCCEEEEECSEEEECSCEEE
T ss_pred ---HHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEe------c---CCCceEEEecCEEEEEeCCcc
Confidence 11233344578999999999999987654 666666532 0 012346799999999999543
No 228
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.10 E-value=2.1e-05 Score=77.83 Aligned_cols=99 Identities=8% Similarity=0.080 Sum_probs=71.5
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. |.+|+++|+.+.+... ...
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------------------~d~ 217 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRL-GIDSYIFARGNRILRK--------------------------------------FDE 217 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTT-TCEEEEECSSSSSCTT--------------------------------------SCH
T ss_pred CeEEEECChHHHHHHHHHHHHc-CCeEEEEecCCccCcc--------------------------------------cch
Confidence 4799999999999999999999 9999999997643210 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeE-EEcCEEEEcCCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNV-MEAKVVVSSCGHDGP 243 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~-i~Ak~VI~AtGg~~~ 243 (356)
++...+.+.+. +.|++++++++++++..+++....+...+ +.+ +.+|.||+|+|....
T Consensus 218 ~~~~~l~~~l~-~~gv~i~~~~~v~~i~~~~~~~~~v~~~~--------------g~~~~~~D~vi~a~G~~p~ 276 (500)
T 1onf_A 218 SVINVLENDMK-KNNINIVTFADVVEIKKVSDKNLSIHLSD--------------GRIYEHFDHVIYCVGRSPD 276 (500)
T ss_dssp HHHHHHHHHHH-HTTCEEECSCCEEEEEESSTTCEEEEETT--------------SCEEEEESEEEECCCBCCT
T ss_pred hhHHHHHHHHH-hCCCEEEECCEEEEEEEcCCceEEEEECC--------------CcEEEECCEEEECCCCCcC
Confidence 33344455554 67999999999999987543323344431 234 899999999996543
No 229
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.10 E-value=2.6e-05 Score=71.40 Aligned_cols=96 Identities=17% Similarity=0.199 Sum_probs=73.1
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. +.+|+++++...+.. ..
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~-g~~v~~~~~~~~~~~----------------------------------------~~ 186 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANI-CSKIYLIHRRDEFRA----------------------------------------AP 186 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTT-SSEEEEECSSSSCBS----------------------------------------CH
T ss_pred CEEEEECCCHHHHHHHHHHHhh-CCEEEEEEeCCCCCC----------------------------------------CH
Confidence 5799999999999999999999 999999998753210 01
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
. +++++.++.|+++++++.+.++..+++++.++.+.. .+|+..++.+|.||+|+|..
T Consensus 187 ~----~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~----------~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 187 S----TVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKL----------KDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp H----HHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEEC----------TTSCEEEECCSCEEECSCEE
T ss_pred H----HHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEc----------CCCCeEEeecCeEEEEEcCC
Confidence 1 223333478999999999999998887887776641 01234589999999999954
No 230
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.10 E-value=4.2e-05 Score=70.95 Aligned_cols=166 Identities=16% Similarity=0.156 Sum_probs=100.0
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. |.+|+++++.+.+.. ..
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~-g~~V~~v~~~~~~~~----------------------------------------~~ 191 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDT-ARRITLIHRRPQFRA----------------------------------------HE 191 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTT-SSEEEEECSSSSCCS----------------------------------------CH
T ss_pred CEEEEECCCHHHHHHHHHHHhh-CCEEEEEEcCCccCc----------------------------------------cH
Confidence 4799999999999999999999 999999998753210 01
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCCCCCCccch
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 250 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~~~~~~~~ 250 (356)
...+.+.+.+. +.|+++++++.++++.. ++++.++.+.. .. +++..++.+|.||+|+|.... ..
T Consensus 192 ~~~~~l~~~l~-~~gv~v~~~~~v~~i~~-~~~~~~v~~~~------~~---~g~~~~i~~D~vi~a~G~~p~-----~~ 255 (335)
T 2zbw_A 192 ASVKELMKAHE-EGRLEVLTPYELRRVEG-DERVRWAVVFH------NQ---TQEELALEVDAVLILAGYITK-----LG 255 (335)
T ss_dssp HHHHHHHHHHH-TTSSEEETTEEEEEEEE-SSSEEEEEEEE------TT---TCCEEEEECSEEEECCCEEEE-----CG
T ss_pred HHHHHHHhccc-cCCeEEecCCcceeEcc-CCCeeEEEEEE------CC---CCceEEEecCEEEEeecCCCC-----ch
Confidence 12233444444 67999999999999987 45555565531 00 123367999999999994432 22
Q ss_pred hhhccCcccccccccccccccccceeeeccccccCceeEeceEEEEecCCcccCCcc-ceeeeehHHHHHHHHHHhCCC
Q 018414 251 RLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTF-GAMMISGQKAAHLALKSLGQP 328 (356)
Q Consensus 251 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~~~~~~~~~~g~~~~~~~~-g~~l~sG~~~~~l~l~~~~~~ 328 (356)
.+...++... . ..+.++ +.. +.-.+++|..|...... + .+.. ...+..|..+++.+++.+...
T Consensus 256 ~l~~~~~~~~-~--g~i~vd--~~~-----~t~~~~vya~GD~~~~~-~----~~~~~~~A~~~g~~aa~~i~~~l~~~ 319 (335)
T 2zbw_A 256 PLANWGLALE-K--NKIKVD--TTM-----ATSIPGVYACGDIVTYP-G----KLPLIVLGFGEAAIAANHAAAYANPA 319 (335)
T ss_dssp GGGGSCCCEE-T--TEEECC--TTC-----BCSSTTEEECSTTEECT-T----CCCCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred Hhhhcceecc-C--CeeeeC--CCC-----CCCCCCEEEeccccccC-c----chhhhhhhHHHHHHHHHHHHHHhhhh
Confidence 2333332100 1 111111 111 11137888887644321 1 1111 112257888899999888644
No 231
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.10 E-value=3.7e-05 Score=75.83 Aligned_cols=102 Identities=16% Similarity=0.227 Sum_probs=73.7
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. |.+|+++|+.+.+... ...
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------------------~d~ 239 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARL-GAKVTVVEFLDTILGG--------------------------------------MDG 239 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSSSSS--------------------------------------SCH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCEEEEEecccccccc--------------------------------------CCH
Confidence 4799999999999999999999 9999999988643210 013
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
++.+.+.+.+. +.|++++.+++++++..+++.+. +...+ .+ .++..++.+|.||+|+|...
T Consensus 240 ~~~~~l~~~l~-~~gV~v~~~~~v~~i~~~~~~~~-v~~~~------~~---~g~~~~i~~D~Vi~a~G~~p 300 (491)
T 3urh_A 240 EVAKQLQRMLT-KQGIDFKLGAKVTGAVKSGDGAK-VTFEP------VK---GGEATTLDAEVVLIATGRKP 300 (491)
T ss_dssp HHHHHHHHHHH-HTTCEEECSEEEEEEEEETTEEE-EEEEE------TT---SCCCEEEEESEEEECCCCEE
T ss_pred HHHHHHHHHHH-hCCCEEEECCeEEEEEEeCCEEE-EEEEe------cC---CCceEEEEcCEEEEeeCCcc
Confidence 33444455554 67999999999999988777554 33321 00 12346899999999999543
No 232
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.09 E-value=2.5e-06 Score=84.20 Aligned_cols=40 Identities=33% Similarity=0.628 Sum_probs=37.2
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~ 130 (356)
.+||+|||||++||++|+.|+++ |++|+|+|+...+||.+
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~GG~~ 52 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIH-GLNVTVFEAEGKAGGKL 52 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-SCEEEEECSSSSSCSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCcEEEEEeCCCCCCce
Confidence 48999999999999999999999 99999999999988754
No 233
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.09 E-value=2.8e-05 Score=76.02 Aligned_cols=100 Identities=19% Similarity=0.286 Sum_probs=71.2
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. |.+|+|+|+.+.+... ...
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------------------~~~ 212 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNY-GVDVTIVEFLPRALPN--------------------------------------EDA 212 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSTT--------------------------------------SCH
T ss_pred CeEEEECCcHHHHHHHHHHHHc-CCeEEEEEcCCccccc--------------------------------------cCH
Confidence 5799999999999999999999 9999999998643210 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
++...+.+.+. +.|++++++++++++..+++.+. +.... +++..++.+|.||+|+|...
T Consensus 213 ~~~~~l~~~l~-~~gv~i~~~~~v~~i~~~~~~~~-v~~~~-----------~g~~~~~~~D~vv~a~G~~p 271 (464)
T 2a8x_A 213 DVSKEIEKQFK-KLGVTILTATKVESIADGGSQVT-VTVTK-----------DGVAQELKAEKVLQAIGFAP 271 (464)
T ss_dssp HHHHHHHHHHH-HHTCEEECSCEEEEEEECSSCEE-EEEES-----------SSCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHH-HcCCEEEeCcEEEEEEEcCCeEE-EEEEc-----------CCceEEEEcCEEEECCCCCc
Confidence 23334444444 56999999999999987655432 33210 11236799999999999543
No 234
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.08 E-value=2e-05 Score=74.15 Aligned_cols=167 Identities=15% Similarity=0.140 Sum_probs=101.6
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. +.+|+++++...+... .
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~-g~~V~lv~~~~~~~~~----------------------------------------~ 202 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKN-AASVTLVHRGHEFQGH----------------------------------------G 202 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTT-SSEEEEECSSSSCSSC----------------------------------------S
T ss_pred CcEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCCCCCCC----------------------------------------H
Confidence 4799999999999999999999 9999999987542110 0
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCCCCCCccch
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 250 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~~~~~~~~ 250 (356)
.+.+.+.+... +.|++++++++++++..+++++.++.+.. .+++..++.+|.||+|+|.... ..
T Consensus 203 ~~~~~l~~~~~-~~gv~i~~~~~v~~i~~~~~~v~~v~~~~----------~~g~~~~i~~D~vi~a~G~~p~-----~~ 266 (360)
T 3ab1_A 203 KTAHEVERARA-NGTIDVYLETEVASIEESNGVLTRVHLRS----------SDGSKWTVEADRLLILIGFKSN-----LG 266 (360)
T ss_dssp HHHHSSHHHHH-HTSEEEESSEEEEEEEEETTEEEEEEEEE----------TTCCEEEEECSEEEECCCBCCS-----CG
T ss_pred HHHHHHHHHhh-cCceEEEcCcCHHHhccCCCceEEEEEEe----------cCCCeEEEeCCEEEECCCCCCC-----HH
Confidence 11122333333 56999999999999998888877776531 0122367999999999994432 12
Q ss_pred hhhccCcccccccccccccccccceeeeccccccCceeEeceEEEEecCCcccCCccceeeeehHHHHHHHHHHhCCC
Q 018414 251 RLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQP 328 (356)
Q Consensus 251 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~~~~~~~~~~g~~~~~~~~g~~l~sG~~~~~l~l~~~~~~ 328 (356)
.+...++... . ..+.++ +.. +.-.|++|..|.....- +.. ......+..|..+++.+++.+...
T Consensus 267 ~l~~~~~~~~-~--g~i~vd--~~~-----~t~~~~vya~GD~~~~~-~~~---~~~~~A~~~g~~aa~~i~~~l~~~ 330 (360)
T 3ab1_A 267 PLARWDLELY-E--NALVVD--SHM-----KTSVDGLYAAGDIAYYP-GKL---KIIQTGLSEATMAVRHSLSYIKPG 330 (360)
T ss_dssp GGGGSSCCEE-T--TEEECC--TTS-----BCSSTTEEECSTTEECT-TCC---CSHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHhhccccc-c--Ceeeec--CCC-----cCCCCCEEEecCccCCC-Ccc---ceeehhHHHHHHHHHHHHhhcCCc
Confidence 2333222100 0 111111 111 11237888887644321 111 111112256888899999888654
No 235
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.08 E-value=2.8e-06 Score=81.36 Aligned_cols=40 Identities=30% Similarity=0.523 Sum_probs=37.0
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~ 130 (356)
++||+|||||++|+++|+.|++. |.+|+|+|+...+||.+
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~~~~~GG~~ 42 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK-GHQVHIIDQRDHIGGNS 42 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSSSGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCcEEEEEecCCcCCcc
Confidence 47999999999999999999999 99999999998888765
No 236
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.07 E-value=3.8e-05 Score=71.07 Aligned_cols=96 Identities=21% Similarity=0.250 Sum_probs=70.5
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. |.+|+++++.+.+.. .
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~~~----------------------------------------~- 190 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKF-ADEVTVIHRRDTLRA----------------------------------------N- 190 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-CSEEEEECSSSSCCS----------------------------------------C-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCEEEEEeCCCcCCc----------------------------------------c-
Confidence 5799999999999999999999 999999998753210 0
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
..+.+++.++.|++++++++++++..+ +++.++.+.+ .. +|+..++.+|.||+|+|..
T Consensus 191 ---~~~~~~l~~~~gv~i~~~~~v~~i~~~-~~v~~v~~~~------~~---~g~~~~i~~D~vi~a~G~~ 248 (325)
T 2q7v_A 191 ---KVAQARAFANPKMKFIWDTAVEEIQGA-DSVSGVKLRN------LK---TGEVSELATDGVFIFIGHV 248 (325)
T ss_dssp ---HHHHHHHHTCTTEEEECSEEEEEEEES-SSEEEEEEEE------TT---TCCEEEEECSEEEECSCEE
T ss_pred ---hHHHHHHHhcCCceEecCCceEEEccC-CcEEEEEEEE------CC---CCcEEEEEcCEEEEccCCC
Confidence 122344444579999999999999864 5566666531 00 1233579999999999844
No 237
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.06 E-value=2.3e-05 Score=77.10 Aligned_cols=100 Identities=12% Similarity=0.070 Sum_probs=71.1
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.++|||||..|+.+|..|++. |.+|+|+|+.+.+... ...
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~-G~~Vtlv~~~~~~l~~--------------------------------------~~~ 226 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTL-GSRLDVVEMMDGLMQG--------------------------------------ADR 226 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSSSSSTT--------------------------------------SCH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEECCccccc--------------------------------------cCH
Confidence 5799999999999999999999 9999999998643210 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
++.+.+.+.+. +.|++++++++++++..+++.+ .+...+ .. ++..++.+|.||+|+|..
T Consensus 227 ~~~~~l~~~l~-~~gV~i~~~~~v~~i~~~~~~~-~v~~~~------~~----~~g~~~~~D~vv~a~G~~ 285 (482)
T 1ojt_A 227 DLVKVWQKQNE-YRFDNIMVNTKTVAVEPKEDGV-YVTFEG------AN----APKEPQRYDAVLVAAGRA 285 (482)
T ss_dssp HHHHHHHHHHG-GGEEEEECSCEEEEEEEETTEE-EEEEES------SS----CCSSCEEESCEEECCCEE
T ss_pred HHHHHHHHHHH-hcCCEEEECCEEEEEEEcCCeE-EEEEec------cC----CCceEEEcCEEEECcCCC
Confidence 33344455554 6799999999999998776543 333321 00 012468899999999954
No 238
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.05 E-value=2.5e-05 Score=72.10 Aligned_cols=96 Identities=19% Similarity=0.240 Sum_probs=70.6
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+..|..|++. +.+|+++++.+.+.. ..
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~-g~~V~~i~~~~~~~~----------------------------------------~~ 194 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEY-VKNVTIIEYMPKYMC----------------------------------------EN 194 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-BSEEEEECSSSSCCS----------------------------------------CH
T ss_pred CeEEEECCCHHHHHHHHHHHhh-CCcEEEEEcCCccCC----------------------------------------CH
Confidence 5799999999999999999999 999999998753210 01
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
.+.+.+. +.|++++++++++++..+++++.++.+.+ .. +++..++.+|.||+|+|..
T Consensus 195 ----~l~~~l~-~~gv~i~~~~~v~~i~~~~~~v~~v~~~~------~~---~g~~~~i~~D~vi~a~G~~ 251 (319)
T 3cty_A 195 ----AYVQEIK-KRNIPYIMNAQVTEIVGDGKKVTGVKYKD------RT---TGEEKLIETDGVFIYVGLI 251 (319)
T ss_dssp ----HHHHHHH-HTTCCEECSEEEEEEEESSSSEEEEEEEE------TT---TCCEEEECCSEEEECCCEE
T ss_pred ----HHHHHHh-cCCcEEEcCCeEEEEecCCceEEEEEEEE------cC---CCceEEEecCEEEEeeCCc
Confidence 1233333 46999999999999987766676666531 00 1233579999999999844
No 239
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.04 E-value=3.9e-05 Score=77.40 Aligned_cols=94 Identities=15% Similarity=0.222 Sum_probs=69.7
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. |.+|+++++.+.+... ...
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------------------~~~ 228 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRER-GIEVTLVEMANQVMPP--------------------------------------IDY 228 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTT--------------------------------------SCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEecCCccccc--------------------------------------CCH
Confidence 5799999999999999999999 9999999987642210 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
.+...+.+.+. +.|++++++++|+++..+++. +...+ +.++.+|.||+|+|..
T Consensus 229 ~~~~~l~~~l~-~~GV~i~~~~~v~~i~~~~~~---v~~~~--------------g~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 229 EMAAYVHEHMK-NHDVELVFEDGVDALEENGAV---VRLKS--------------GSVIQTDMLILAIGVQ 281 (588)
T ss_dssp HHHHHHHHHHH-HTTCEEECSCCEEEEEGGGTE---EEETT--------------SCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHH-HcCCEEEECCeEEEEecCCCE---EEECC--------------CCEEEcCEEEEccCCC
Confidence 33444455554 679999999999998755442 44431 3579999999999944
No 240
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.04 E-value=5.8e-05 Score=74.53 Aligned_cols=100 Identities=16% Similarity=0.119 Sum_probs=72.8
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. |.+|+++|+.+.+... ...
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------------------~d~ 215 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRL-GVIVKVFGRSGSVANL--------------------------------------QDE 215 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHT-TCEEEEECCTTCCTTC--------------------------------------CCH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEECCccccc--------------------------------------CCH
Confidence 5799999999999999999999 9999999998653210 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
++.+.+.+.+. +. ++++++++++++..+++.+. +...+ .+|+..++.+|.||+|+|...
T Consensus 216 ~~~~~l~~~l~-~~-V~i~~~~~v~~i~~~~~~v~-v~~~~----------~~G~~~~i~~D~Vi~a~G~~p 274 (492)
T 3ic9_A 216 EMKRYAEKTFN-EE-FYFDAKARVISTIEKEDAVE-VIYFD----------KSGQKTTESFQYVLAATGRKA 274 (492)
T ss_dssp HHHHHHHHHHH-TT-SEEETTCEEEEEEECSSSEE-EEEEC----------TTCCEEEEEESEEEECSCCEE
T ss_pred HHHHHHHHHHh-hC-cEEEECCEEEEEEEcCCEEE-EEEEe----------CCCceEEEECCEEEEeeCCcc
Confidence 34445555554 45 99999999999988776654 33210 012236799999999999543
No 241
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.04 E-value=3.7e-05 Score=76.49 Aligned_cols=98 Identities=12% Similarity=0.163 Sum_probs=72.2
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.++|||+|..|+.+|..|++. |.+|+++|+.+.+... ...
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~-G~~Vtlv~~~~~~l~~--------------------------------------~~~ 255 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNAT-GRRTVMLVRTEPLKLI--------------------------------------KDN 255 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCTTTTC--------------------------------------CSH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEecCccccc--------------------------------------ccH
Confidence 5799999999999999999999 9999999998642110 013
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeC-CeEE--EEEEcceeeecccCCCCCCCCe-EEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVG--GVVTNWALVSMNHDTQSCMDPN-VMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~-~~v~--gv~~~~~~~~~~~~~~~~g~~~-~i~Ak~VI~AtGg~~ 242 (356)
.+...+.+.+. +.|++++++++|+++..++ +++. .+.+.+ +. ++.+|.||+|+|...
T Consensus 256 ~~~~~l~~~l~-~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~--------------G~~~i~aD~Vv~A~G~~p 316 (523)
T 1mo9_A 256 ETRAYVLDRMK-EQGMEIISGSNVTRIEEDANGRVQAVVAMTPN--------------GEMRIETDFVFLGLGEQP 316 (523)
T ss_dssp HHHHHHHHHHH-HTTCEEESSCEEEEEEECTTSBEEEEEEEETT--------------EEEEEECSCEEECCCCEE
T ss_pred HHHHHHHHHHH-hCCcEEEECCEEEEEEEcCCCceEEEEEEECC--------------CcEEEEcCEEEECcCCcc
Confidence 34445555554 5799999999999998754 4442 333321 23 799999999999554
No 242
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.03 E-value=4e-06 Score=81.52 Aligned_cols=40 Identities=23% Similarity=0.328 Sum_probs=37.3
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~ 130 (356)
++||+|||+|++|+++|+.|++. |++|+|+|++..+||.+
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~-g~~v~~~e~~~~~gg~~ 45 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVN-GKKVLHMDRNPYYGGES 45 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTTS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCcEEEEecCCCccccc
Confidence 58999999999999999999999 99999999998888754
No 243
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.03 E-value=3.1e-05 Score=76.25 Aligned_cols=97 Identities=11% Similarity=0.135 Sum_probs=72.7
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.++|||+|..|+..|..|++. |.+|+++++.+.+... ...
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vtli~~~~~~l~~--------------------------------------~~~ 232 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGL-GVKTTLLHRGDLILRN--------------------------------------FDY 232 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSTT--------------------------------------SCH
T ss_pred CcEEEECcCHHHHHHHHHHHHc-CCeEEEEECCCccccc--------------------------------------cCH
Confidence 5799999999999999999999 9999999987642100 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
.+...+.+.+. +.|++++++++|+++..+++++ .+.+.+ +.++.+|.||+|+|...
T Consensus 233 ~~~~~l~~~l~-~~Gv~i~~~~~V~~i~~~~~~v-~v~~~~--------------g~~i~aD~Vi~A~G~~p 288 (484)
T 3o0h_A 233 DLRQLLNDAMV-AKGISIIYEATVSQVQSTENCY-NVVLTN--------------GQTICADRVMLATGRVP 288 (484)
T ss_dssp HHHHHHHHHHH-HHTCEEESSCCEEEEEECSSSE-EEEETT--------------SCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHH-HCCCEEEeCCEEEEEEeeCCEE-EEEECC--------------CcEEEcCEEEEeeCCCc
Confidence 33444555554 5699999999999998876665 444432 35799999999999543
No 244
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.02 E-value=4.1e-05 Score=74.93 Aligned_cols=95 Identities=9% Similarity=0.186 Sum_probs=71.6
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. |.+|+++|+.+.+-. ...
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~---------------------------------------~~~ 216 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARL-GSKVTVLARNTLFFR---------------------------------------EDP 216 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCTTTT---------------------------------------SCH
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEEECCccCC---------------------------------------CCH
Confidence 5799999999999999999999 999999998753210 002
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
.+.+.+.+.+. +.|++++++++|+++..+++.+ .+.+. ..++.+|.||+|+|...
T Consensus 217 ~~~~~l~~~l~-~~Gv~i~~~~~v~~i~~~~~~~-~v~~~---------------~~~i~aD~Vv~a~G~~p 271 (467)
T 1zk7_A 217 AIGEAVTAAFR-AEGIEVLEHTQASQVAHMDGEF-VLTTT---------------HGELRADKLLVATGRTP 271 (467)
T ss_dssp HHHHHHHHHHH-HTTCEEETTCCEEEEEEETTEE-EEEET---------------TEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHH-hCCCEEEcCCEEEEEEEeCCEE-EEEEC---------------CcEEEcCEEEECCCCCc
Confidence 33445555554 5799999999999998766533 34432 25799999999999654
No 245
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.02 E-value=2.4e-05 Score=76.55 Aligned_cols=102 Identities=19% Similarity=0.216 Sum_probs=72.0
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. |.+|+++|+.+.+... ...
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtli~~~~~~l~~--------------------------------------~~~ 218 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRI-GSEVTVVEFASEIVPT--------------------------------------MDA 218 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHH-TCEEEEECSSSSSSTT--------------------------------------SCH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCCccccc--------------------------------------ccH
Confidence 5799999999999999999999 9999999998643210 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
++.+.+.+.+. +.|++++++++++++..+++.+. +...+ . .+++..++.+|.||+|+|...
T Consensus 219 ~~~~~l~~~l~-~~gv~i~~~~~v~~i~~~~~~~~-v~~~~------~---~~g~~~~~~~D~vv~a~G~~p 279 (470)
T 1dxl_A 219 EIRKQFQRSLE-KQGMKFKLKTKVVGVDTSGDGVK-LTVEP------S---AGGEQTIIEADVVLVSAGRTP 279 (470)
T ss_dssp HHHHHHHHHHH-HSSCCEECSEEEEEEECSSSSEE-EEEEE------S---SSCCCEEEEESEEECCCCEEE
T ss_pred HHHHHHHHHHH-HcCCEEEeCCEEEEEEEcCCeEE-EEEEe------c---CCCcceEEECCEEEECCCCCc
Confidence 33444455554 57999999999999976554432 33221 0 012346799999999999543
No 246
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.01 E-value=5.7e-05 Score=74.04 Aligned_cols=99 Identities=14% Similarity=0.096 Sum_probs=72.0
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. |.+|+++++.+.+... ...
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------------------~~~ 221 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARL-GAEVTVLEAMDKFLPA--------------------------------------VDE 221 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSSSTT--------------------------------------SCH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCcEEEEecCCCcCcc--------------------------------------cCH
Confidence 5799999999999999999999 9999999998642110 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
++.+.+.+.+. +.|++++++++++++..+++.+. +...+ . ++ ..++.+|.||+|+|..
T Consensus 222 ~~~~~l~~~l~-~~Gv~v~~~~~v~~i~~~~~~~~-v~~~~------~----~g-~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 222 QVAKEAQKILT-KQGLKILLGARVTGTEVKNKQVT-VKFVD------A----EG-EKSQAFDKLIVAVGRR 279 (476)
T ss_dssp HHHHHHHHHHH-HTTEEEEETCEEEEEEECSSCEE-EEEES------S----SE-EEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHH-hCCCEEEECCEEEEEEEcCCEEE-EEEEe------C----CC-cEEEECCEEEEeeCCc
Confidence 34444455554 67999999999999988766554 33321 0 01 2578999999999944
No 247
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.01 E-value=5.6e-05 Score=74.01 Aligned_cols=101 Identities=14% Similarity=0.194 Sum_probs=71.5
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.++|||+|..|+.+|..|++. |.+|+++|+.+.+... ...
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------------------~d~ 215 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARL-GAEVTVVEFAPRCAPT--------------------------------------LDE 215 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSTT--------------------------------------SCH
T ss_pred ceEEEECCCHHHHHHHHHHHHh-CCEEEEEecCCccccc--------------------------------------CCH
Confidence 5799999999999999999999 9999999998643210 012
Q ss_pred HHHHHHHHHH-HcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKL-LARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~-~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
++.+.+.+.+ . +.|++++++++|+++..+++.+. +.+.. . +++..++.+|.||+|+|...
T Consensus 216 ~~~~~l~~~l~~-~~gv~i~~~~~v~~i~~~~~~~~-v~~~~-------~---~g~~~~i~~D~vv~a~G~~p 276 (468)
T 2qae_A 216 DVTNALVGALAK-NEKMKFMTSTKVVGGTNNGDSVS-LEVEG-------K---NGKRETVTCEALLVSVGRRP 276 (468)
T ss_dssp HHHHHHHHHHHH-HTCCEEECSCEEEEEEECSSSEE-EEEEC-------C------EEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHhh-cCCcEEEeCCEEEEEEEcCCeEE-EEEEc-------C---CCceEEEECCEEEECCCccc
Confidence 3344455555 4 57999999999999987655432 33220 0 11236799999999999554
No 248
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.00 E-value=5.9e-05 Score=74.52 Aligned_cols=98 Identities=16% Similarity=0.250 Sum_probs=70.0
Q ss_pred ccEEEECCCHHHHHHHHHhhc----CCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEE
Q 018414 91 TDVVVVGAGSAGLSCAYELSK----NPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVI 166 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~----~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~ 166 (356)
-.|+|||||..|+.+|..|++ . |.+|+++++...+-... +
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~-g~~V~~v~~~~~~~~~~------l----------------------------- 224 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARAL-GTEVIQLFPEKGNMGKI------L----------------------------- 224 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHH-TCEEEEECSSSSTTTTT------S-----------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhc-CCEEEEEecCccccccc------C-----------------------------
Confidence 479999999999999999876 4 78999999764321100 0
Q ss_pred echHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 167 KHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 167 ~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
...+...+.+.+. +.||++++++.|+++..+++.+ .+.+.+ +.++.+|.||+|+|...
T Consensus 225 --~~~~~~~~~~~l~-~~GV~v~~~~~V~~i~~~~~~~-~v~l~d--------------G~~i~aD~Vv~a~G~~p 282 (493)
T 1m6i_A 225 --PEYLSNWTMEKVR-REGVKVMPNAIVQSVGVSSGKL-LIKLKD--------------GRKVETDHIVAAVGLEP 282 (493)
T ss_dssp --CHHHHHHHHHHHH-TTTCEEECSCCEEEEEEETTEE-EEEETT--------------SCEEEESEEEECCCEEE
T ss_pred --CHHHHHHHHHHHH-hcCCEEEeCCEEEEEEecCCeE-EEEECC--------------CCEEECCEEEECCCCCc
Confidence 0223334444454 7799999999999998776654 455432 36799999999999543
No 249
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.00 E-value=2.2e-05 Score=76.84 Aligned_cols=97 Identities=20% Similarity=0.181 Sum_probs=68.8
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-+|+|||||.+|+.+|..|++. |.+|+|+|+.+.+... ...
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------------------~~~ 212 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKL-GAQVSVVEARERILPT--------------------------------------YDS 212 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSSSTT--------------------------------------SCH
T ss_pred CeEEEECcCHHHHHHHHHHHHC-CCeEEEEEcCCccccc--------------------------------------cCH
Confidence 4799999999999999999999 9999999998643210 002
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
++...+.+.+. +.|++++++++|+++.. +++ .+... +|+..++.+|.||+|+|...
T Consensus 213 ~~~~~l~~~l~-~~gv~i~~~~~v~~i~~--~~v-~v~~~------------~G~~~~i~~D~vv~a~G~~p 268 (458)
T 1lvl_A 213 ELTAPVAESLK-KLGIALHLGHSVEGYEN--GCL-LANDG------------KGGQLRLEADRVLVAVGRRP 268 (458)
T ss_dssp HHHHHHHHHHH-HHTCEEETTCEEEEEET--TEE-EEECS------------SSCCCEECCSCEEECCCEEE
T ss_pred HHHHHHHHHHH-HCCCEEEECCEEEEEEe--CCE-EEEEC------------CCceEEEECCEEEECcCCCc
Confidence 23334444444 56999999999999865 332 22211 12236799999999999544
No 250
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.00 E-value=3.9e-05 Score=75.85 Aligned_cols=97 Identities=16% Similarity=0.210 Sum_probs=72.2
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.++|||+|..|+.+|..|++. |.+|+++|+.+.+... ...
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------------------~d~ 223 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTEL-GVPVTVVASQDHVLPY--------------------------------------EDA 223 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHT-TCCEEEECSSSSSSCC--------------------------------------SSH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEcCCccccc--------------------------------------cCH
Confidence 5799999999999999999999 9999999988643210 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
.+...+.+.+. +.|++++++++|+++..+++++ .+... +..++.+|.||+|+|...
T Consensus 224 ~~~~~l~~~l~-~~GV~i~~~~~V~~i~~~~~~v-~v~~~--------------~g~~i~aD~Vv~a~G~~p 279 (499)
T 1xdi_A 224 DAALVLEESFA-ERGVRLFKNARAASVTRTGAGV-LVTMT--------------DGRTVEGSHALMTIGSVP 279 (499)
T ss_dssp HHHHHHHHHHH-HTTCEEETTCCEEEEEECSSSE-EEEET--------------TSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHH-HCCCEEEeCCEEEEEEEeCCEE-EEEEC--------------CCcEEEcCEEEECCCCCc
Confidence 33444555554 6799999999999998766554 23332 236799999999999554
No 251
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.98 E-value=4.2e-05 Score=74.82 Aligned_cols=98 Identities=7% Similarity=0.079 Sum_probs=72.3
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
...++|||+|..|+..|..+++. |.+|+++++.+.+... ..
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~-g~~Vt~v~~~~~~l~~--------------------------------------~~ 210 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGL-GVKTTLIYRGKEILSR--------------------------------------FD 210 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSTT--------------------------------------SC
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCeEEEEEcCCccccc--------------------------------------cC
Confidence 35799999999999999999999 9999999987642100 01
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEE-EcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVV-TNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~-~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
..+.+.+.+.+. +.|++++++++|+++..+++....+. +.+ +. +.+|.||+|+|...
T Consensus 211 ~~~~~~l~~~l~-~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~--------------g~-i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 211 QDMRRGLHAAME-EKGIRILCEDIIQSVSADADGRRVATTMKH--------------GE-IVADQVMLALGRMP 268 (463)
T ss_dssp HHHHHHHHHHHH-HTTCEEECSCCEEEEEECTTSCEEEEESSS--------------CE-EEESEEEECSCEEE
T ss_pred HHHHHHHHHHHH-HCCCEEECCCEEEEEEEcCCCEEEEEEcCC--------------Ce-EEeCEEEEeeCccc
Confidence 233445555554 67999999999999988755433454 431 24 99999999999543
No 252
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.97 E-value=0.00011 Score=67.68 Aligned_cols=164 Identities=13% Similarity=0.184 Sum_probs=99.7
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. +.+|+++++...+.. . .
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~-~~~v~~~~~~~~~~~---------------------------------------~-~ 193 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPI-AKEVSIIHRRDKFRA---------------------------------------H-E 193 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTT-BSEEEEECSSSSCSS---------------------------------------C-H
T ss_pred CEEEEECCCHhHHHHHHHHHhh-CCeEEEEEecCcCCc---------------------------------------c-H
Confidence 4799999999999999999999 999999998754210 0 0
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCCCCCCccch
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 250 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~~~~~~~~ 250 (356)
. .++.+. +.|++++.+++++++..+++ +..+...+ .. .++..++.+|.||+|+|-... ..
T Consensus 194 ~----~~~~l~-~~gv~~~~~~~v~~i~~~~~-~~~v~~~~------~~---~g~~~~~~~D~vv~a~G~~p~-----~~ 253 (332)
T 3lzw_A 194 H----SVENLH-ASKVNVLTPFVPAELIGEDK-IEQLVLEE------VK---GDRKEILEIDDLIVNYGFVSS-----LG 253 (332)
T ss_dssp H----HHHHHH-HSSCEEETTEEEEEEECSSS-CCEEEEEE------TT---SCCEEEEECSEEEECCCEECC-----CG
T ss_pred H----HHHHHh-cCCeEEEeCceeeEEecCCc-eEEEEEEe------cC---CCceEEEECCEEEEeeccCCC-----ch
Confidence 0 122233 56999999999999976554 44455432 11 123567999999999994432 12
Q ss_pred hhhccCcccccccccccccccccceeeeccccccCceeEeceEEEEecCCcccCCccceeeeehHHHHHHHHHHhCCCC
Q 018414 251 RLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPN 329 (356)
Q Consensus 251 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~~~~~~~~~~g~~~~~~~~g~~l~sG~~~~~l~l~~~~~~~ 329 (356)
.+...++.. . ...+..+ +.. +.-.+++|..|..... .+.++ .....+..|..+++.+++.+....
T Consensus 254 ~~~~~~~~~--~-~g~i~vd--~~~-----~t~~~~vya~GD~~~~-~~~~~---~~~~A~~~g~~aa~~i~~~l~~~~ 318 (332)
T 3lzw_A 254 PIKNWGLDI--E-KNSIVVK--STM-----ETNIEGFFAAGDICTY-EGKVN---LIASGFGEAPTAVNNAKAYMDPKA 318 (332)
T ss_dssp GGGGSSCCE--E-TTEEECC--TTS-----BCSSTTEEECGGGEEC-TTCCC---CHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred HHhhcCccc--c-CCeEEeC--CCC-----ceecCCEEEccceecC-CCCcc---eEeeehhhHHHHHHHHHHhhChhh
Confidence 233333210 0 0111111 111 1123888888865532 11111 112233578999999999997653
No 253
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.96 E-value=5.7e-05 Score=74.26 Aligned_cols=101 Identities=15% Similarity=0.142 Sum_probs=70.7
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.++|||+|..|+.+|..|++. |.+|+++++...... ...
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~l~~---------------------------------------~d~ 227 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGL-GYEPTVMVRSIVLRG---------------------------------------FDQ 227 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSCSSTT---------------------------------------SCH
T ss_pred CcEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCCCCcc---------------------------------------cCH
Confidence 4799999999999999999999 999999997531100 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
++.+.+.+.+. +.|++++++++++++..+++....+...+ .. .++..++.+|.||+|+|..
T Consensus 228 ~~~~~l~~~l~-~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~------~~---~~~~~~~~~D~vi~a~G~~ 288 (483)
T 3dgh_A 228 QMAELVAASME-ERGIPFLRKTVPLSVEKQDDGKLLVKYKN------VE---TGEESEDVYDTVLWAIGRK 288 (483)
T ss_dssp HHHHHHHHHHH-HTTCCEEETEEEEEEEECTTSCEEEEEEE------TT---TCCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHH-hCCCEEEeCCEEEEEEEcCCCcEEEEEec------CC---CCceeEEEcCEEEECcccc
Confidence 33444555554 67999999999999987544322344432 11 1224579999999999954
No 254
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.96 E-value=4.5e-05 Score=75.25 Aligned_cols=99 Identities=12% Similarity=0.076 Sum_probs=71.5
Q ss_pred ccEEEECCCHHHHHHHHHhhcC--CCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEec
Q 018414 91 TDVVVVGAGSAGLSCAYELSKN--PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~--~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 168 (356)
-.++|||+|..|+.+|..|++. +|.+|+++|+.+.+... .
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~--------------------------------------~ 229 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG--------------------------------------F 229 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT--------------------------------------S
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc--------------------------------------c
Confidence 4799999999999999999874 28999999998642210 0
Q ss_pred hHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
..++.+.+.+.+. +.|++++++++|+++..+++....+.+.+ +.++.+|.||+|+|...
T Consensus 230 d~~~~~~l~~~l~-~~GV~i~~~~~v~~i~~~~~~~~~v~~~~--------------G~~i~~D~vv~a~G~~p 288 (490)
T 1fec_A 230 DSELRKQLTEQLR-ANGINVRTHENPAKVTKNADGTRHVVFES--------------GAEADYDVVMLAIGRVP 288 (490)
T ss_dssp CHHHHHHHHHHHH-HTTEEEEETCCEEEEEECTTSCEEEEETT--------------SCEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHH-hCCCEEEeCCEEEEEEEcCCCEEEEEECC--------------CcEEEcCEEEEccCCCc
Confidence 1233445555554 57999999999999987654333444432 24799999999999543
No 255
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.94 E-value=5e-05 Score=75.91 Aligned_cols=96 Identities=18% Similarity=0.215 Sum_probs=72.3
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.++|||||..|+..|..+++. |.+|+|+++...... ...
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~l-G~~VTii~~~~~L~~---------------------------------------~D~ 263 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSL-GYDVTVAVRSIVLRG---------------------------------------FDQ 263 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-TCCEEEEESSCSSTT---------------------------------------SCH
T ss_pred ceEEEECCCHHHHHHHHHHHhc-CCeEEEecccccccc---------------------------------------cch
Confidence 4799999999999999999999 999999987542110 013
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
++...+.+.+. +.|+++++++.++.+...++.+. +... +...+.+|.|++|+|...
T Consensus 264 ei~~~l~~~l~-~~gi~~~~~~~v~~~~~~~~~~~-v~~~--------------~~~~~~~D~vLvAvGR~P 319 (542)
T 4b1b_A 264 QCAVKVKLYME-EQGVMFKNGILPKKLTKMDDKIL-VEFS--------------DKTSELYDTVLYAIGRKG 319 (542)
T ss_dssp HHHHHHHHHHH-HTTCEEEETCCEEEEEEETTEEE-EEET--------------TSCEEEESEEEECSCEEE
T ss_pred hHHHHHHHHHH-hhcceeecceEEEEEEecCCeEE-EEEc--------------CCCeEEEEEEEEcccccC
Confidence 44455555554 67999999999999998887654 3332 235678999999999543
No 256
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.94 E-value=5.5e-06 Score=81.69 Aligned_cols=41 Identities=46% Similarity=0.720 Sum_probs=37.6
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~ 130 (356)
..+||+|||||++|+++|+.|++. |.+|+|+|+...+||..
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~-g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGA-GHQVTVLEASERPGGRV 72 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHH-TCEEEEECSSSSSBTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEECCCCCCCce
Confidence 358999999999999999999999 99999999998888754
No 257
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.94 E-value=5.6e-05 Score=74.71 Aligned_cols=98 Identities=12% Similarity=0.155 Sum_probs=70.7
Q ss_pred ccEEEECCCHHHHHHHHHhhcC-C-CCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEec
Q 018414 91 TDVVVVGAGSAGLSCAYELSKN-P-NIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~-~-G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 168 (356)
-.++|||+|..|+.+|..|++. + |.+|+++|+.+.+-.. .
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~--------------------------------------~ 233 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG--------------------------------------F 233 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT--------------------------------------S
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc--------------------------------------c
Confidence 4799999999999999999874 2 8999999987642110 0
Q ss_pred hHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
..++...+.+.+. +.|++++++++|+++..+++....+.+.+ +.++.+|.||+|+|..
T Consensus 234 d~~~~~~l~~~l~-~~GV~i~~~~~v~~i~~~~~~~~~v~~~~--------------G~~i~~D~vv~a~G~~ 291 (495)
T 2wpf_A 234 DETIREEVTKQLT-ANGIEIMTNENPAKVSLNTDGSKHVTFES--------------GKTLDVDVVMMAIGRI 291 (495)
T ss_dssp CHHHHHHHHHHHH-HTTCEEEESCCEEEEEECTTSCEEEEETT--------------SCEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHH-hCCCEEEeCCEEEEEEEcCCceEEEEECC--------------CcEEEcCEEEECCCCc
Confidence 1233444555554 67999999999999987654333454432 2479999999999954
No 258
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.93 E-value=0.00016 Score=70.32 Aligned_cols=140 Identities=11% Similarity=0.140 Sum_probs=75.2
Q ss_pred cccEEEECCCHHHHHHHHHhhcC-CCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCc-------cccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDY-------DEQD 161 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~-~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~-------~~~~ 161 (356)
...|+|||+|..|+-+|..|++. ++.+|+++++...+-... ...+...+ ......+++..+.... ....
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~--~~~~~~~~-~~p~~~~~~~~l~~~~~~~~~~~~~~~ 303 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPAD--DSPFVNEV-FAPKFTDLIYSREHAERERLLREYHNT 303 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCC--CCHHHHGG-GSHHHHHHHHHSCHHHHHHHHHHTGGG
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCcc--CCccchhc-cChhHHHHHhcCCHHHHHHHHHHhhcc
Confidence 45899999999999999999884 578999999986431000 00000000 0001111111110000 0000
Q ss_pred CeEEEec--hHHHHHHHH-HHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcC
Q 018414 162 NYVVIKH--AALFTSTIM-SKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSC 238 (356)
Q Consensus 162 ~~~~~~~--~~~~~~~l~-~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~At 238 (356)
.|..... ...+...++ +.+....+++++.+++|+++..+++.+. +.+.+ .. +|+..++.+|.||+|+
T Consensus 304 ~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~-v~~~~------~~---~g~~~~~~~D~Vv~At 373 (463)
T 3s5w_A 304 NYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIE-LALRD------AG---SGELSVETYDAVILAT 373 (463)
T ss_dssp TSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEE-EEEEE------TT---TCCEEEEEESEEEECC
T ss_pred CCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEE-EEEEE------cC---CCCeEEEECCEEEEee
Confidence 1111111 122222333 2333347999999999999988776543 33321 11 1234579999999999
Q ss_pred CCCC
Q 018414 239 GHDG 242 (356)
Q Consensus 239 Gg~~ 242 (356)
|...
T Consensus 374 G~~p 377 (463)
T 3s5w_A 374 GYER 377 (463)
T ss_dssp CEEC
T ss_pred CCCC
Confidence 9554
No 259
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.92 E-value=5.7e-05 Score=73.51 Aligned_cols=95 Identities=21% Similarity=0.257 Sum_probs=69.2
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-+|+|||+|..|+.+|..|++. |.+|+++++.+.+.... ...
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~~-------------------------------------~~~ 190 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQ-GKNVTMIVRGERVLRRS-------------------------------------FDK 190 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSTTTTT-------------------------------------SCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEEcCCccchhh-------------------------------------cCH
Confidence 4899999999999999999999 99999999986432100 013
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
++...+.+.+. +. +++++++.++++..++ ++..+... ..++.+|.||+|+|..
T Consensus 191 ~~~~~l~~~l~-~~-v~i~~~~~v~~i~~~~-~v~~v~~~---------------g~~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 191 EVTDILEEKLK-KH-VNLRLQEITMKIEGEE-RVEKVVTD---------------AGEYKAELVILATGIK 243 (449)
T ss_dssp HHHHHHHHHHT-TT-SEEEESCCEEEEECSS-SCCEEEET---------------TEEEECSEEEECSCEE
T ss_pred HHHHHHHHHHH-hC-cEEEeCCeEEEEeccC-cEEEEEeC---------------CCEEECCEEEEeeCCc
Confidence 34444555554 55 9999999999986544 44334332 3679999999999944
No 260
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.92 E-value=0.00011 Score=72.05 Aligned_cols=103 Identities=13% Similarity=0.105 Sum_probs=71.9
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. |.+|+++++.+.+... ...
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~--------------------------------------~d~ 228 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSAL-GSKTSLMIRHDKVLRS--------------------------------------FDS 228 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTT--------------------------------------SCH
T ss_pred ccEEEECCCHHHHHHHHHHHHc-CCeEEEEEeCCccccc--------------------------------------cCH
Confidence 4799999999999999999999 9999999987642100 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCe-EEEEEEcceeeecccCCCCCCC--CeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGR-VGGVVTNWALVSMNHDTQSCMD--PNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~gv~~~~~~~~~~~~~~~~g~--~~~i~Ak~VI~AtGg~~ 242 (356)
.+.+.+.+.+. +.|++++.++.++++..+++. ...+...+ .. .++ ..++.+|.||+|+|...
T Consensus 229 ~~~~~~~~~l~-~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~------~~---~g~~~g~~~~~D~vi~a~G~~p 293 (478)
T 3dk9_A 229 MISTNCTEELE-NAGVEVLKFSQVKEVKKTLSGLEVSMVTAV------PG---RLPVMTMIPDVDCLLWAIGRVP 293 (478)
T ss_dssp HHHHHHHHHHH-HTTCEEETTEEEEEEEECSSSEEEEEEECC------TT---SCCEEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHH-HCCCEEEeCCEEEEEEEcCCCcEEEEEEcc------CC---CCcccceEEEcCEEEEeecccc
Confidence 33444455554 679999999999999876443 23344321 00 011 16799999999999543
No 261
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.91 E-value=3.2e-05 Score=73.44 Aligned_cols=90 Identities=23% Similarity=0.298 Sum_probs=66.7
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.++|||+|..|+.+|..|++. |.+|+++|+.+.+.. + ..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~--~-------------------------------------~~ 183 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEA-GYHVKLIHRGAMFLG--L-------------------------------------DE 183 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHT-TCEEEEECSSSCCTT--C-------------------------------------CH
T ss_pred CcEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCCeecc--C-------------------------------------CH
Confidence 4799999999999999999999 999999999864321 0 02
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
++.+.+.+.+. +.|++++++++++++. .+ ++.+.+ +. +.+|.||+|+|..
T Consensus 184 ~~~~~l~~~l~-~~gV~i~~~~~v~~i~--~~---~v~~~~--------------g~-i~~D~vi~a~G~~ 233 (367)
T 1xhc_A 184 ELSNMIKDMLE-ETGVKFFLNSELLEAN--EE---GVLTNS--------------GF-IEGKVKICAIGIV 233 (367)
T ss_dssp HHHHHHHHHHH-HTTEEEECSCCEEEEC--SS---EEEETT--------------EE-EECSCEEEECCEE
T ss_pred HHHHHHHHHHH-HCCCEEEcCCEEEEEE--ee---EEEECC--------------CE-EEcCEEEECcCCC
Confidence 33344445554 5699999999999885 22 244432 24 9999999999944
No 262
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.90 E-value=8.4e-05 Score=68.09 Aligned_cols=164 Identities=19% Similarity=0.169 Sum_probs=97.9
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
...|+|||+|..|+.+|..|++. +.+|+++++...+.. .
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~-g~~v~~~~~~~~~~~---------------------------------------~- 192 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSY-STKVYLIHRRDTFKA---------------------------------------Q- 192 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-SSEEEEECSSSSCCS---------------------------------------C-
T ss_pred CCEEEEECCCHHHHHHHHHHHHh-CCeEEEEEeCCCCCc---------------------------------------C-
Confidence 35799999999999999999999 999999998754211 0
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCCCCCCccc
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGV 249 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~~~~~~~ 249 (356)
. .+++++.++.|+++++++.++++..+ +++..+.+.+ .. .|+..++.+|.||+|+|.... .
T Consensus 193 ~----~~~~~~~~~~gv~~~~~~~v~~i~~~-~~~~~v~~~~------~~---~g~~~~~~~D~vv~a~G~~p~-----~ 253 (323)
T 3f8d_A 193 P----IYVETVKKKPNVEFVLNSVVKEIKGD-KVVKQVVVEN------LK---TGEIKELNVNGVFIEIGFDPP-----T 253 (323)
T ss_dssp H----HHHHHHHTCTTEEEECSEEEEEEEES-SSEEEEEEEE------TT---TCCEEEEECSEEEECCCEECC-----H
T ss_pred H----HHHHHHHhCCCcEEEeCCEEEEEecc-CceeEEEEEE------CC---CCceEEEEcCEEEEEECCCCC-----h
Confidence 1 23444555669999999999999865 5555565542 01 123457999999999994432 2
Q ss_pred hhhhccCcccccccccccccccccceeeeccccccCceeEeceEEEEecCCcccCCccceeeeehHHHHHHHHHHhC
Q 018414 250 KRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLG 326 (356)
Q Consensus 250 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~~~~~~~~~~g~~~~~~~~g~~l~sG~~~~~l~l~~~~ 326 (356)
..+...++. ......+..+ +..-. -.+++|..|..... ..........+..|..+++.+.+.+.
T Consensus 254 ~~~~~~g~~--~~~~g~i~vd--~~~~t-----~~~~vya~GD~~~~----~~~~~~~~~A~~~g~~aa~~i~~~l~ 317 (323)
T 3f8d_A 254 DFAKSNGIE--TDTNGYIKVD--EWMRT-----SVPGVFAAGDCTSA----WLGFRQVITAVAQGAVAATSAYRYVT 317 (323)
T ss_dssp HHHHHTTCC--BCTTSSBCCC--TTCBC-----SSTTEEECSTTBST----TTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhhcCee--ecCCCcEecC--CCcee-----cCCCEEEcceecCC----CCcccceeehhhHHHHHHHHHHHHHH
Confidence 233333331 0001111111 11101 13778877643211 00011122233678888888888774
No 263
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.89 E-value=6.6e-05 Score=74.70 Aligned_cols=97 Identities=16% Similarity=0.205 Sum_probs=72.5
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+-+|..|++. +.+|+++++.+.+.. .
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~-g~~Vtlv~~~~~l~~---------------------------------------~-- 393 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGI-VEHVTLLEFAPEMKA---------------------------------------D-- 393 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-BSEEEEECSSSSCCS---------------------------------------C--
T ss_pred CeEEEECCCHHHHHHHHHHHhh-CCEEEEEEeCcccCc---------------------------------------C--
Confidence 4799999999999999999999 999999998754210 0
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
..+.+++.+..|++++.++.++++..+++++.++...+. . +++..++.+|.||+|+|..
T Consensus 394 ---~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~------~---~g~~~~i~~D~vi~a~G~~ 452 (521)
T 1hyu_A 394 ---QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDR------V---SGDIHSVALAGIFVQIGLL 452 (521)
T ss_dssp ---HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEET------T---TCCEEEEECSEEEECCCEE
T ss_pred ---HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeC------C---CCceEEEEcCEEEECcCCC
Confidence 123344443369999999999999877777777766420 1 1234679999999999944
No 264
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.88 E-value=9.1e-05 Score=72.95 Aligned_cols=101 Identities=15% Similarity=0.160 Sum_probs=69.3
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.++|||+|..|+.+|..|++. |.+|+++++...... ...
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~l~~---------------------------------------~d~ 225 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGI-GLDTTVMMRSIPLRG---------------------------------------FDQ 225 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCSSTT---------------------------------------SCH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCceEEEEcCccccc---------------------------------------CCH
Confidence 4699999999999999999999 999999998632100 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
++.+.+.+.+. +.|+++++++.++++...++....+...+ .++ ++..++.+|.||+|+|-.
T Consensus 226 ~~~~~l~~~l~-~~gv~~~~~~~v~~i~~~~~~~~~v~~~~------~~~---g~~~~~~~D~vi~a~G~~ 286 (488)
T 3dgz_A 226 QMSSLVTEHME-SHGTQFLKGCVPSHIKKLPTNQLQVTWED------HAS---GKEDTGTFDTVLWAIGRV 286 (488)
T ss_dssp HHHHHHHHHHH-HTTCEEEETEEEEEEEECTTSCEEEEEEE------TTT---TEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHH-HCCCEEEeCCEEEEEEEcCCCcEEEEEEe------CCC---CeeEEEECCEEEEcccCC
Confidence 33444455554 67999999999999987443222233321 010 122468999999999944
No 265
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.86 E-value=8e-05 Score=69.25 Aligned_cols=97 Identities=12% Similarity=0.204 Sum_probs=68.7
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. +.+|+++++...+.. .
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~-g~~V~l~~~~~~~~~---------~-------------------------------- 193 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRF-ARSVTLVHRRDEFRA---------S-------------------------------- 193 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTT-CSEEEEECSSSSCSS---------C--------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHh-CCeEEEEEcCCcCCc---------c--------------------------------
Confidence 5799999999999999999999 999999998753210 0
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
+.+.+++.++.|++++++++++++..++ ++.++.+.+. . +++..++.+|.||+|+|...
T Consensus 194 ---~~~~~~~~~~~gV~v~~~~~v~~i~~~~-~~~~v~~~~~------~---~g~~~~i~~D~vi~a~G~~p 252 (335)
T 2a87_A 194 ---KIMLDRARNNDKIRFLTNHTVVAVDGDT-TVTGLRVRDT------N---TGAETTLPVTGVFVAIGHEP 252 (335)
T ss_dssp ---TTHHHHHHHCTTEEEECSEEEEEEECSS-SCCEEEEEEE------T---TSCCEEECCSCEEECSCEEE
T ss_pred ---HHHHHHHhccCCcEEEeCceeEEEecCC-cEeEEEEEEc------C---CCceEEeecCEEEEccCCcc
Confidence 0112233346799999999999997554 3334444310 0 12346799999999999543
No 266
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.86 E-value=1e-05 Score=79.37 Aligned_cols=40 Identities=40% Similarity=0.607 Sum_probs=36.3
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccCCCCCcc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSVSPGGGA 130 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~~~Gg~~ 130 (356)
.+||+|||+|++|+++|+.|++. |. +|+|+|+...+||.+
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~-g~~~v~~~e~~~~~gg~~ 44 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEA-GITDLLILEATDHIGGRM 44 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHT-TCCCEEEECSSSSSBTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-CCCceEEEeCCCCCCCce
Confidence 48999999999999999999999 98 899999998888754
No 267
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.71 E-value=2.7e-05 Score=80.68 Aligned_cols=40 Identities=25% Similarity=0.439 Sum_probs=37.0
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~ 130 (356)
.+||+|||||++|+++|+.|++. |++|+|+|+...+||..
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~-G~~Vtlie~~~~~GG~~ 428 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMES-GYTVHLTDTAEKIGGHL 428 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSTTTTH
T ss_pred CceEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCcCCee
Confidence 58999999999999999999999 99999999998887754
No 268
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.69 E-value=0.00045 Score=63.17 Aligned_cols=97 Identities=19% Similarity=0.261 Sum_probs=70.0
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+-+|..|++. |.+|+|+|+....-. . .
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~-G~~Vt~v~~~~~~~~---------------------------------------~-~ 191 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKY-GSKVIILHRRDAFRA---------------------------------------S-K 191 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSSSCCS---------------------------------------C-H
T ss_pred CeEEEECCChHHHHHHHHHHHh-CCeeeeecccccccc---------------------------------------c-c
Confidence 4799999999999999999999 999999998643110 0 1
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
.+..+.....+++.+..+.+.++...++...++...+ .. .++..++.+|.|++|+|..
T Consensus 192 ----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------~~---~~~~~~i~~d~vi~a~G~~ 249 (314)
T 4a5l_A 192 ----TMQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHN------LV---SGEYKVVPVAGLFYAIGHS 249 (314)
T ss_dssp ----HHHHHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEE------TT---TCCEEEEECSEEEECSCEE
T ss_pred ----hhhhhhhcccceeeEeeeeeEEEEeeeeccceeEEee------cc---cccceeeccccceEecccc
Confidence 1122233466888888988888887766666665532 11 1245789999999999943
No 269
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.68 E-value=0.00045 Score=68.61 Aligned_cols=101 Identities=20% Similarity=0.255 Sum_probs=67.5
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.++|||+|..|+.+|..|++. |.+|+++++...... ...
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~-G~~Vtlv~~~~~l~~---------------------------------------~d~ 250 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGI-GLDVTVMVRSILLRG---------------------------------------FDQ 250 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCSSTT---------------------------------------SCH
T ss_pred CeEEEECCcHHHHHHHHHHHHc-CCeEEEEeccccccc---------------------------------------CCH
Confidence 3699999999999999999999 999999998521100 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeC----CeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKG----GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~----~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
++.+.+.+.+. +.||+++.++.++++...+ +.+. +.... .++ ++..++.+|.||+|+|...
T Consensus 251 ~~~~~~~~~l~-~~GV~v~~~~~v~~v~~~~~~~~~~~~-v~~~~------~~g---~~~~~~~~D~vi~a~G~~p 315 (519)
T 3qfa_A 251 DMANKIGEHME-EHGIKFIRQFVPIKVEQIEAGTPGRLR-VVAQS------TNS---EEIIEGEYNTVMLAIGRDA 315 (519)
T ss_dssp HHHHHHHHHHH-HTTCEEEESEEEEEEEEEECCTTCEEE-EEEEE------SSS---SCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHH-HCCCEEEeCCeEEEEEEccCCCCceEE-EEEEE------CCC---cEEEEEECCEEEEecCCcc
Confidence 33444455554 6799999999888886532 3332 22211 010 0124678999999999543
No 270
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.66 E-value=3.3e-05 Score=79.18 Aligned_cols=39 Identities=26% Similarity=0.563 Sum_probs=36.4
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGG 129 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~ 129 (356)
.+||+|||+|++|+++|+.|++. |++|+|+|+...+||.
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~~~-g~~v~~~e~~~~~gg~ 145 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQSF-GMDVTLLEARDRVGGR 145 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHT-TCEEEEECSSSSSBTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHC-CCeEEEEecCCCCCCc
Confidence 57999999999999999999999 9999999999888764
No 271
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.65 E-value=0.00036 Score=68.24 Aligned_cols=99 Identities=19% Similarity=0.156 Sum_probs=69.2
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. |.+|+++++.+.+.... ...
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~~-------------------------------------~d~ 214 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLM-GVQTHIIEMLDRALITL-------------------------------------EDQ 214 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTTS-------------------------------------CCH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCEEEEEEeCCcCCCCC-------------------------------------CCH
Confidence 4799999999999999999999 99999999876432100 012
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeC-CeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~-~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
++.+.+.+.+ + ++++.+++++++..++ +.+. +...+ .+|+..++.+|.||+|+|...
T Consensus 215 ~~~~~l~~~l--~--v~i~~~~~v~~i~~~~~~~v~-v~~~~----------~~G~~~~i~~D~vi~a~G~~p 272 (466)
T 3l8k_A 215 DIVNTLLSIL--K--LNIKFNSPVTEVKKIKDDEYE-VIYST----------KDGSKKSIFTNSVVLAAGRRP 272 (466)
T ss_dssp HHHHHHHHHH--C--CCEECSCCEEEEEEEETTEEE-EEECC----------TTSCCEEEEESCEEECCCEEE
T ss_pred HHHHHHHhcC--E--EEEEECCEEEEEEEcCCCcEE-EEEEe----------cCCceEEEEcCEEEECcCCCc
Confidence 2333333333 2 9999999999998766 6554 33320 012345899999999999543
No 272
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.61 E-value=0.00042 Score=64.92 Aligned_cols=104 Identities=15% Similarity=0.253 Sum_probs=65.5
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. |.+|+++++...+.... ++.. + ....
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~-g~~V~lv~~~~~~~~~~--------------------------~d~~--~---~~~~ 214 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKN-GSDIALYTSTTGLNDPD--------------------------ADPS--V---RLSP 214 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECC------------------------------------CT--T---SCCH
T ss_pred CEEEEECCCcCHHHHHHHHHhc-CCeEEEEecCCCCCCCC--------------------------CCCC--c---cCCH
Confidence 4799999999999999999999 99999999875321000 0000 0 0012
Q ss_pred HHHHHHHHHHHcCCC-cEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEE-EcCEEEEcCCCCC
Q 018414 171 LFTSTIMSKLLARPN-VKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVM-EAKVVVSSCGHDG 242 (356)
Q Consensus 171 ~~~~~l~~~~~~~~g-v~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i-~Ak~VI~AtGg~~ 242 (356)
.+.+.+.+.+. +.| ++++.++.++++..+++.+ .+...+ +..+ .+|.||+|+|-..
T Consensus 215 ~~~~~l~~~l~-~~g~v~~~~~~~v~~i~~~~~~~-~v~~~~--------------g~~~~~~d~vi~a~G~~~ 272 (369)
T 3d1c_A 215 YTRQRLGNVIK-QGARIEMNVHYTVKDIDFNNGQY-HISFDS--------------GQSVHTPHEPILATGFDA 272 (369)
T ss_dssp HHHHHHHHHHH-TTCCEEEECSCCEEEEEEETTEE-EEEESS--------------SCCEEESSCCEECCCBCG
T ss_pred HHHHHHHHHHh-hCCcEEEecCcEEEEEEecCCce-EEEecC--------------CeEeccCCceEEeeccCC
Confidence 23344444444 666 9999999999997666543 333332 1234 4699999999543
No 273
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.59 E-value=5.2e-05 Score=79.66 Aligned_cols=39 Identities=26% Similarity=0.563 Sum_probs=36.3
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGG 129 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~ 129 (356)
.+||+|||+|++||++|+.|+++ |++|+|+|+...+||.
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~-g~~v~v~E~~~~~GG~ 316 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSF-GMDVTLLEARDRVGGR 316 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCcEEEEEecCcCCCc
Confidence 47999999999999999999999 9999999999888864
No 274
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.58 E-value=0.00014 Score=70.68 Aligned_cols=92 Identities=17% Similarity=0.231 Sum_probs=65.7
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.++|||||..|+.+|..+++. |.+|+|+|+...+.... ..
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~ll~~~--------------------------------------d~ 188 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYER-GLHPTLIHRSDKINKLM--------------------------------------DA 188 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSCCSTTS--------------------------------------CG
T ss_pred cEEEEECCccchhhhHHHHHhc-CCcceeeeeeccccccc--------------------------------------cc
Confidence 4799999999999999999999 99999999986432100 01
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
++.+.+.+.+. +.|++++++++|+++. .+. +... +..++.+|.||+|+|..
T Consensus 189 ~~~~~~~~~l~-~~gV~i~~~~~v~~~~--~~~---v~~~--------------~g~~~~~D~vl~a~G~~ 239 (437)
T 4eqs_A 189 DMNQPILDELD-KREIPYRLNEEINAIN--GNE---ITFK--------------SGKVEHYDMIIEGVGTH 239 (437)
T ss_dssp GGGHHHHHHHH-HTTCCEEESCCEEEEE--TTE---EEET--------------TSCEEECSEEEECCCEE
T ss_pred hhHHHHHHHhh-ccceEEEeccEEEEec--CCe---eeec--------------CCeEEeeeeEEEEecee
Confidence 11223344443 5799999999988763 332 3333 24678999999999944
No 275
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.57 E-value=4.9e-05 Score=72.69 Aligned_cols=84 Identities=15% Similarity=0.209 Sum_probs=61.4
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. |.+|+++|+.+.+....+ ..
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~-g~~Vtvv~~~~~~l~~~~-------------------------------------~~ 188 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDS-GTPASIGIILEYPLERQL-------------------------------------DR 188 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSSSCTTTS-------------------------------------CH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEEcCCccchhhc-------------------------------------CH
Confidence 4799999999999999999999 999999999864321100 02
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
.+...+.+.+. +.|+++++++.++++ . .++.+|.||+|+|..
T Consensus 189 ~~~~~~~~~l~-~~gV~~~~~~~v~~i------------g----------------~~~~~D~vv~a~G~~ 230 (385)
T 3klj_A 189 DGGLFLKDKLD-RLGIKIYTNSNFEEM------------G----------------DLIRSSCVITAVGVK 230 (385)
T ss_dssp HHHHHHHHHHH-TTTCEEECSCCGGGC------------H----------------HHHHHSEEEECCCEE
T ss_pred HHHHHHHHHHH-hCCCEEEeCCEEEEc------------C----------------eEEecCeEEECcCcc
Confidence 23333444444 679999999876655 1 347799999999943
No 276
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.55 E-value=0.00097 Score=67.28 Aligned_cols=99 Identities=16% Similarity=0.198 Sum_probs=64.8
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||||..|+-+|..|++. |.+|+++++...... ...
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~l~~---------------------------------------~d~ 326 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASL-GGDVTVMVRSILLRG---------------------------------------FDQ 326 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCSSTT---------------------------------------SCH
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEECCcCcCc---------------------------------------CCH
Confidence 3799999999999999999999 999999998621100 002
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEe------C---CeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVK------G---GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~------~---~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
.+...+.+.+. +.|+++++++.++++... + +++. +.... . +++...+.+|.||+|+|..
T Consensus 327 ~~~~~~~~~l~-~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~-v~~~~------~----~g~~~~~~~D~vi~a~G~~ 394 (598)
T 2x8g_A 327 QMAEKVGDYME-NHGVKFAKLCVPDEIKQLKVVDTENNKPGLLL-VKGHY------T----DGKKFEEEFETVIFAVGRE 394 (598)
T ss_dssp HHHHHHHHHHH-HTTCEEEETEEEEEEEEEECCBTTTTBCCEEE-EEEEE------T----TSCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHH-hCCCEEEECCeEEEEEeccccccccCCCceEE-EEEEe------C----CCcEEeccCCEEEEEeCCc
Confidence 22333444444 569999999988887542 2 3332 21110 0 1122345699999999944
No 277
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.46 E-value=9.9e-05 Score=74.91 Aligned_cols=40 Identities=25% Similarity=0.338 Sum_probs=38.3
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCcc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGA 130 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~ 130 (356)
+|||+|||+|..|+..|..|++. |++|++|||+...||.+
T Consensus 8 ~~D~~i~GtGl~~~~~a~~~~~~-g~~vl~id~~~~~gg~~ 47 (650)
T 1vg0_A 8 DFDVIVIGTGLPESIIAAACSRS-GQRVLHVDSRSYYGGNW 47 (650)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCGGG
T ss_pred cCCEEEECCcHHHHHHHHHHHhC-CCEEEEEcCCCcccCcc
Confidence 69999999999999999999999 99999999999999875
No 278
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.45 E-value=0.00045 Score=68.40 Aligned_cols=100 Identities=18% Similarity=0.210 Sum_probs=65.1
Q ss_pred cEEEECCCHHHHHHHHHhhcC-------------CCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCcc
Q 018414 92 DVVVVGAGSAGLSCAYELSKN-------------PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYD 158 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~-------------~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~ 158 (356)
.++|||||+.|+.+|..|++. ...+|+|+|..+.+-..
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~----------------------------- 269 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNM----------------------------- 269 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTT-----------------------------
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccC-----------------------------
Confidence 599999999999999888642 03689999998643210
Q ss_pred ccCCeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEE-EEEcceeeecccCCCCCCCCeEEEcCEEEEc
Q 018414 159 EQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGG-VVTNWALVSMNHDTQSCMDPNVMEAKVVVSS 237 (356)
Q Consensus 159 ~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g-v~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~A 237 (356)
....+.+.+.+.+. +.||+++++++|+++. ++.+.. +...++ . ....++.+|.||.|
T Consensus 270 ---------~~~~~~~~~~~~L~-~~GV~v~~~~~v~~v~--~~~~~~~~~~~dg------~----~~~~~i~ad~viwa 327 (502)
T 4g6h_A 270 ---------FEKKLSSYAQSHLE-NTSIKVHLRTAVAKVE--EKQLLAKTKHEDG------K----ITEETIPYGTLIWA 327 (502)
T ss_dssp ---------SCHHHHHHHHHHHH-HTTCEEETTEEEEEEC--SSEEEEEEECTTS------C----EEEEEEECSEEEEC
T ss_pred ---------CCHHHHHHHHHHHH-hcceeeecCceEEEEe--CCceEEEEEecCc------c----cceeeeccCEEEEc
Confidence 01233344444454 6799999999999884 333322 211110 0 01257999999999
Q ss_pred CCCCC
Q 018414 238 CGHDG 242 (356)
Q Consensus 238 tGg~~ 242 (356)
+|-..
T Consensus 328 ~Gv~~ 332 (502)
T 4g6h_A 328 TGNKA 332 (502)
T ss_dssp CCEEC
T ss_pred cCCcC
Confidence 99443
No 279
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.38 E-value=0.00011 Score=72.83 Aligned_cols=35 Identities=26% Similarity=0.438 Sum_probs=32.8
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.+||++|||+|++|+.+|++|++. |.+|+|||++.
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~-~~~v~~~e~~~ 44 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQA-GIPTQIVEMGR 44 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCcEEEEECCC
Confidence 369999999999999999999998 99999999975
No 280
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.29 E-value=0.0038 Score=57.08 Aligned_cols=97 Identities=15% Similarity=0.212 Sum_probs=65.7
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||||..|+-+|..|++. |.+|+|+|+.+.+-. . .
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~~~---------------------------------------~-~ 184 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKF-ADKVTIVHRRDELRA---------------------------------------Q-R 184 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-CSEEEEECSSSSCCS---------------------------------------C-H
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCEEEEEecccccCc---------------------------------------c-h
Confidence 4799999999999999999999 999999998764211 0 0
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
. ..++..++.++.+.....+......+.......... .. .++...+.++.|+.+.|..
T Consensus 185 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~~~~d~v~~~~g~~ 242 (312)
T 4gcm_A 185 I----LQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTS------TK---DGSEETHEADGVFIYIGMK 242 (312)
T ss_dssp H----HHHHHHHCTTEEEECSEEEEEEEEETTEEEEEEEEE------TT---TCCEEEEECSEEEECSCEE
T ss_pred h----HHHHHHHhcCcceeeecceeeeeccccccccceeee------ec---CCceeEEeeeeEEeecCCC
Confidence 0 011222366788888877777766665443333211 01 1245789999999999944
No 281
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.22 E-value=0.00099 Score=71.56 Aligned_cols=104 Identities=18% Similarity=0.232 Sum_probs=69.4
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
.|+|||||..|+-+|..|.+. |. +|+++++.... . +.. ...
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~-G~~~Vtvv~r~~~~----~---------~~~------------------------~~~ 375 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRC-GARRVFLVFRKGFV----N---------IRA------------------------VPE 375 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHT-TCSEEEEECSSCGG----G---------CCS------------------------CHH
T ss_pred cEEEECCChHHHHHHHHHHHc-CCCEEEEEEecChh----h---------CCC------------------------CHH
Confidence 899999999999999999999 86 89999987410 0 000 001
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCC---CCCCCeEEEcCEEEEcCCCC
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQ---SCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~---~~g~~~~i~Ak~VI~AtGg~ 241 (356)
+ ++.+. +.|+++++++.++++..+++++.++.+.... .+.++. ..++..++.+|.||+|+|..
T Consensus 376 e-----~~~~~-~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~--~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~ 441 (1025)
T 1gte_A 376 E-----VELAK-EEKCEFLPFLSPRKVIVKGGRIVAVQFVRTE--QDETGKWNEDEDQIVHLKADVVISAFGSV 441 (1025)
T ss_dssp H-----HHHHH-HTTCEEECSEEEEEEEEETTEEEEEEEEEEE--ECTTSCEEEEEEEEEEEECSEEEECSCEE
T ss_pred H-----HHHHH-HcCCEEEeCCCceEEEccCCeEEEEEEEEeE--EcCCCCcccCCCceEEEECCEEEECCCCC
Confidence 1 12233 4699999999999998778888877653110 000000 00123579999999999943
No 282
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.19 E-value=0.001 Score=71.08 Aligned_cols=162 Identities=16% Similarity=0.193 Sum_probs=96.4
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEechH
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAA 170 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 170 (356)
-.|+|||+|..|+.+|..|++. |.+|+|+|+.+.+. .
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~-G~~Vtvv~~~~~~~------------------------------------------~ 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAAT-GGVVAVIDARSSIS------------------------------------------A 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGG-TCCSEEEESCSSCC------------------------------------------H
T ss_pred CeEEEEcCCHHHHHHHHHHHHc-CCcEEEEECCCccc------------------------------------------h
Confidence 4799999999999999999999 99999999875321 0
Q ss_pred HHHHHHHHHHHcCCCcEEEcCeEEEEEEEe-CCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCCCCCCccc
Q 018414 171 LFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGV 249 (356)
Q Consensus 171 ~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~~~~~~~ 249 (356)
. .+.+. +.||++++++.++++..+ ++++.++...+. +.. +.+|+..++.+|.||+|+|-... .
T Consensus 322 ~-----~~~l~-~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~----~~~-~~~G~~~~i~~D~Vv~a~G~~P~-----~ 385 (965)
T 2gag_A 322 A-----AAQAV-ADGVQVISGSVVVDTEADENGELSAIVVAEL----DEA-RELGGTQRFEADVLAVAGGFNPV-----V 385 (965)
T ss_dssp H-----HHHHH-HTTCCEEETEEEEEEEECTTSCEEEEEEEEE----CTT-CCEEEEEEEECSEEEEECCEEEC-----C
T ss_pred h-----HHHHH-hCCeEEEeCCEeEEEeccCCCCEEEEEEEec----ccc-CCCCceEEEEcCEEEECCCcCcC-----h
Confidence 0 12233 569999999999999875 566766665420 000 00012367999999999994322 2
Q ss_pred hhhhccCcccccccccccccccccceeeeccccccCceeEeceEEEEecCCcccCCccceeeeehHHHHHHHHHHhCCCC
Q 018414 250 KRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPN 329 (356)
Q Consensus 250 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~~~~~~~~~~g~~~~~~~~g~~l~sG~~~~~l~l~~~~~~~ 329 (356)
..+...+. .+.++.....++. ..-.+++|..|... +. +.+...+..|..++..++..++...
T Consensus 386 ~l~~~~~g--------~i~vd~~~~~~v~--~ts~p~IyAaGD~a----~~----~~l~~A~~~G~~aA~~i~~~lg~~~ 447 (965)
T 2gag_A 386 HLHSQRQG--------KLDWDTTIHAFVP--ADAVANQHLAGAMT----GR----LDTASALSTGAATGAAAATAAGFAT 447 (965)
T ss_dssp HHHHHTTC--------CEEEETTTTEEEE--CSCCTTEEECGGGG----TC----CSHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHhCCC--------cEEEcCccccccc--CCCCCCEEEEEecC----Cc----hhHHHHHHHHHHHHHHHHHHcCCCc
Confidence 22222110 1111110010110 01136777766422 11 1122334678889999999887544
No 283
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.18 E-value=0.0006 Score=66.62 Aligned_cols=105 Identities=16% Similarity=0.210 Sum_probs=64.6
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
-+|+|||||..|+-+|..+.+. |. +|+++++..... +.. ..
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~-Ga~~Vtiv~r~~~~~---~p~----------------------------------~~ 306 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQ-GATSVKCLYRRDRKN---MPG----------------------------------SQ 306 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHT-TCSEEEEECSSCSTT---CSS----------------------------------CH
T ss_pred CEEEEECCChhHHHHHHHHHHc-CCCEEEEEEeCCccC---CCC----------------------------------CH
Confidence 4799999999999999999998 87 599999875321 000 00
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCC------CCCCeEEEcCEEEEcCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQS------CMDPNVMEAKVVVSSCGH 240 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~------~g~~~~i~Ak~VI~AtGg 240 (356)
.+ ++.+. +.|+++++++.++++.. ++++.++.+..........++. .++..++.+|.||+|+|-
T Consensus 307 ~e-----~~~~~-~~Gv~~~~~~~~~~i~~-~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~ 376 (456)
T 2vdc_G 307 RE-----VAHAE-EEGVEFIWQAAPEGFTG-DTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGF 376 (456)
T ss_dssp HH-----HHHHH-HTTCEEECCSSSCCEEE-EEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCE
T ss_pred HH-----HHHHH-HCCCEEEeCCCceEEeC-CCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCC
Confidence 11 12233 45899999988888864 4555444332100000000000 112367999999999994
No 284
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.13 E-value=0.00015 Score=74.49 Aligned_cols=36 Identities=31% Similarity=0.571 Sum_probs=33.3
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCC--------CeEEEEeccC-CC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPN--------IQIAIIEQSV-SP 126 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G--------~~V~llEk~~-~~ 126 (356)
..+|+|||||++||++|+.|++. | ++|+|+|+.. .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~-g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRL-AATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH-HTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CcccccCCCceEEEEeccCccc
Confidence 36899999999999999999998 7 9999999998 77
No 285
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.12 E-value=0.00059 Score=61.62 Aligned_cols=85 Identities=9% Similarity=0.054 Sum_probs=61.0
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
...|+|||+|..|+.+|..|++. | +|+++++.... +
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~-g-~v~~v~~~~~~----------~-------------------------------- 176 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDW-G-ETTFFTNGIVE----------P-------------------------------- 176 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGT-S-EEEEECTTTCC----------C--------------------------------
T ss_pred CCEEEEEecCccHHHHHHHhhhc-C-cEEEEECCCCC----------C--------------------------------
Confidence 35799999999999999999999 8 99999876420 0
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
...+.+.+. +.|++++. ++++++..++ .+...+ ..++.+|.||+|+|..
T Consensus 177 ---~~~~~~~l~-~~gv~i~~-~~v~~i~~~~----~v~~~~--------------g~~~~~D~vi~a~G~~ 225 (297)
T 3fbs_A 177 ---DADQHALLA-ARGVRVET-TRIREIAGHA----DVVLAD--------------GRSIALAGLFTQPKLR 225 (297)
T ss_dssp ---CHHHHHHHH-HTTCEEEC-SCEEEEETTE----EEEETT--------------SCEEEESEEEECCEEE
T ss_pred ---CHHHHHHHH-HCCcEEEc-ceeeeeecCC----eEEeCC--------------CCEEEEEEEEEccCcc
Confidence 011223333 56999986 7888875322 444432 3679999999999944
No 286
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.10 E-value=0.0041 Score=60.73 Aligned_cols=58 Identities=16% Similarity=0.119 Sum_probs=36.5
Q ss_pred CCcEEEcCeEEEEEEEeC-C-eEEEEEEcceeeecccCCC-----CCCCCeEEEcCEEEEcCCCCCC
Q 018414 184 PNVKLFNAVAAEDLIVKG-G-RVGGVVTNWALVSMNHDTQ-----SCMDPNVMEAKVVVSSCGHDGP 243 (356)
Q Consensus 184 ~gv~i~~~~~v~~i~~~~-~-~v~gv~~~~~~~~~~~~~~-----~~g~~~~i~Ak~VI~AtGg~~~ 243 (356)
.|+++++++.++++..++ + ++.++.+.... +....+ .+++..++.++.||.|+|-.+.
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~--l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~ 334 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTR--LEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSR 334 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEE--EESSGGGCEEEEEEEEEEEECSEEEECCCEECC
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEE--EccccCCCcccCCCceEEEEcCEEEECCCCCCC
Confidence 789999999999987653 5 67666653100 000000 0112367999999999995543
No 287
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.67 E-value=0.0075 Score=58.78 Aligned_cols=34 Identities=24% Similarity=0.375 Sum_probs=28.6
Q ss_pred ccEEEECCCHHHHHHHHHhhcC-------------------CC-CeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKN-------------------PN-IQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~-------------------~G-~~V~llEk~~ 124 (356)
-.|+|||+|..|+-+|..|++. .+ .+|+|+++..
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~ 201 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRG 201 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCC
Confidence 4799999999999999999862 14 4999999875
No 288
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.65 E-value=0.0028 Score=65.54 Aligned_cols=33 Identities=18% Similarity=0.170 Sum_probs=30.7
Q ss_pred ccEEEEC--CCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVG--AGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIG--gG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
-.|+||| ||..|+-+|..|++. |.+|+|+++.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~-G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATA-GHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHT-TCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHc-CCEEEEEeccc
Confidence 4799998 999999999999999 99999999875
No 289
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.61 E-value=0.0047 Score=61.60 Aligned_cols=34 Identities=21% Similarity=0.336 Sum_probs=31.7
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~ 125 (356)
-.|+|||+|..|+-+|..|++. +.+|+++++.+.
T Consensus 179 krV~VIG~G~sgve~a~~l~~~-~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPE-VEHLTVFVRTPQ 212 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-CSEEEEEESSCC
T ss_pred ceEEEECCCchHHHHHHHHHhh-CCEEEEEECCCC
Confidence 4799999999999999999999 999999999864
No 290
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.50 E-value=0.002 Score=64.39 Aligned_cols=34 Identities=15% Similarity=0.317 Sum_probs=31.7
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~ 125 (356)
-.|+|||+|..|+-+|..|++. +.+|+++++.+.
T Consensus 186 krV~VIG~G~tgve~a~~la~~-~~~Vtv~~r~~~ 219 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAET-AKELYVFQRTPN 219 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-BSEEEEEESSCC
T ss_pred CeEEEECCCccHHHHHHHHHhh-CCEEEEEEcCCC
Confidence 4799999999999999999999 999999999874
No 291
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.47 E-value=0.012 Score=60.05 Aligned_cols=28 Identities=25% Similarity=0.423 Sum_probs=24.5
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEE
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAI 119 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~l 119 (356)
-.|+|||||..|+-+|..|++. |.+|++
T Consensus 495 ~~VvVIGgG~~g~E~A~~l~~~-G~~vtv 522 (671)
T 1ps9_A 495 NKVAIIGCGGIGFDTAMYLSQP-GESTSQ 522 (671)
T ss_dssp SEEEEECCHHHHHHHHHHHTCC-SSCGGG
T ss_pred CeEEEECCChhHHHHHHHHHhc-CCCccc
Confidence 5799999999999999999998 876653
No 292
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.46 E-value=0.0069 Score=59.09 Aligned_cols=34 Identities=15% Similarity=0.098 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~ 125 (356)
-.|+|||+|.+|+-+|..|++. |.+|+++++...
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~-g~~V~li~~~~~ 231 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKY-GAKKLISCYRTA 231 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHT-TCSEEEEECSSC
T ss_pred CEEEEEcCCCCHHHHHHHHHHh-CCeEEEEEECCC
Confidence 4799999999999999999999 999999998754
No 293
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.44 E-value=0.006 Score=59.03 Aligned_cols=34 Identities=21% Similarity=0.109 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCe-EEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQ-IAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~-V~llEk~~ 124 (356)
.-+|+|||+|.+|+-+|..|++. +.+ |+++++..
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~-~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPV-AKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTT-SCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHHH-hCCcEEEEeCCC
Confidence 35799999999999999999999 888 99999874
No 294
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=96.25 E-value=0.014 Score=53.21 Aligned_cols=90 Identities=14% Similarity=0.111 Sum_probs=62.7
Q ss_pred ccEEEECCCH-HHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEech
Q 018414 91 TDVVVVGAGS-AGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHA 169 (356)
Q Consensus 91 ~DVvIIGgG~-aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 169 (356)
..++|||||. +++.+|..+.+. +.+|+++++.....
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~-~~~v~i~~~~~~~~------------------------------------------ 183 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNW-STDLVIATNGNELS------------------------------------------ 183 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTT-CSCEEEECSSCCCC------------------------------------------
T ss_pred CceeeecCCCchhhhHHHHHHhC-CceEEEEeccccch------------------------------------------
Confidence 4688888886 567888888878 99999998764210
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGP 243 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~~ 243 (356)
..+.+.+. +.|++++.+ .++.+..+++++..+...+ +.++.++.+|++.|+..+
T Consensus 184 ----~~~~~~l~-~~g~~~~~~-~v~~~~~~~~~~~~v~~~~--------------g~~i~~~~~vi~~g~~~~ 237 (304)
T 4fk1_A 184 ----QTIMDELS-NKNIPVITE-SIRTLQGEGGYLKKVEFHS--------------GLRIERAGGFIVPTFFRP 237 (304)
T ss_dssp ----HHHHHHHH-TTTCCEECS-CEEEEESGGGCCCEEEETT--------------SCEECCCEEEECCEEECS
T ss_pred ----hhhhhhhh-ccceeEeee-eEEEeecCCCeeeeeeccc--------------cceeeecceeeeeccccC
Confidence 11233343 668888887 4667766666777776642 467889999999986654
No 295
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=96.19 E-value=0.017 Score=53.21 Aligned_cols=32 Identities=25% Similarity=0.368 Sum_probs=29.0
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
-.|+|||+|..|+-+|..|++. + +|+++++..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~-~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTV-A-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-S-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhh-C-CEEEEECCC
Confidence 5799999999999999999998 7 799998873
No 296
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.10 E-value=0.017 Score=57.57 Aligned_cols=34 Identities=24% Similarity=0.424 Sum_probs=31.7
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~ 125 (356)
-.|+|||+|..|+-+|..|++. +.+|+++++.+.
T Consensus 192 krV~VIG~G~sgve~a~~l~~~-~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQ-AEQLFVFQRSAN 225 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-BSEEEEEESSCC
T ss_pred CEEEEECCCchHHHHHHHHHhh-CCEEEEEECCCC
Confidence 5799999999999999999999 999999999864
No 297
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=95.54 E-value=0.038 Score=52.53 Aligned_cols=51 Identities=14% Similarity=0.140 Sum_probs=34.8
Q ss_pred HHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 172 FTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 172 ~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
+.+.+.+.+. +.||+++++++|+++.. +. +...+ +.++.+|.||+|+|...
T Consensus 220 ~~~~~~~~l~-~~gV~~~~~~~v~~i~~--~~---v~~~~--------------g~~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 220 SRKAVASIYN-QLGIKLVHNFKIKEIRE--HE---IVDEK--------------GNTIPADITILLPPYTG 270 (409)
T ss_dssp HHHHHHHHHH-HHTCEEECSCCEEEECS--SE---EEETT--------------SCEEECSEEEEECCEEC
T ss_pred HHHHHHHHHH-HCCCEEEcCCceEEECC--Ce---EEECC--------------CCEEeeeEEEECCCCCc
Confidence 3344444444 56999999999988842 32 44432 36799999999999543
No 298
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=95.49 E-value=0.061 Score=51.71 Aligned_cols=104 Identities=13% Similarity=0.181 Sum_probs=59.3
Q ss_pred cEEEECCCHH----H--HHHH----HHhhcCCCCe-----EEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCC
Q 018414 92 DVVVVGAGSA----G--LSCA----YELSKNPNIQ-----IAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGID 156 (356)
Q Consensus 92 DVvIIGgG~a----G--l~aA----~~La~~~G~~-----V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~ 156 (356)
.++|||+|+. | +..| ..+.+. |.+ |+++++.+.++.... .+
T Consensus 151 ~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~-g~~~~~~~Vtlv~~~~~~~~~~l-~~---------------------- 206 (437)
T 3sx6_A 151 GPIVIGAMAGASCFGPAYEYAMIVASDLKKR-GMRDKIPSFTFITSEPYIGHLGI-QG---------------------- 206 (437)
T ss_dssp CCEEEEECTTCCCCHHHHHHHHHHHHHHHHT-TCGGGCSCEEEEESSSSTTCTTT-TC----------------------
T ss_pred CEEEEEcCCCCCcCcHHHHHHHHHHHHHHHc-CCcccCcEEEEEcCCcccccccc-Cc----------------------
Confidence 5799999664 3 4444 556666 765 999998865432000 00
Q ss_pred ccccCCeEEEechHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEE
Q 018414 157 YDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVS 236 (356)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~ 236 (356)
. ......+.+.+ ++.||+++++++++++. ++.+.-.... .++..++..++.+|.||+
T Consensus 207 ------~------~~~~~~~~~~l-~~~gI~~~~~~~v~~v~--~~~v~~~~~~--------~~g~~~~~~~i~~D~vv~ 263 (437)
T 3sx6_A 207 ------V------GDSKGILTKGL-KEEGIEAYTNCKVTKVE--DNKMYVTQVD--------EKGETIKEMVLPVKFGMM 263 (437)
T ss_dssp ------C------TTHHHHHHHHH-HHTTCEEECSEEEEEEE--TTEEEEEEEC--------TTSCEEEEEEEECSEEEE
T ss_pred ------c------hHHHHHHHHHH-HHCCCEEEcCCEEEEEE--CCeEEEEecc--------cCCccccceEEEEeEEEE
Confidence 0 01122233334 36799999999999885 3433211111 000000146799999999
Q ss_pred cCCCCC
Q 018414 237 SCGHDG 242 (356)
Q Consensus 237 AtGg~~ 242 (356)
|+|-.+
T Consensus 264 ~~g~~~ 269 (437)
T 3sx6_A 264 IPAFKG 269 (437)
T ss_dssp ECCEEC
T ss_pred cCCCcC
Confidence 998443
No 299
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=94.89 E-value=0.036 Score=53.19 Aligned_cols=50 Identities=12% Similarity=0.082 Sum_probs=33.0
Q ss_pred HHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 176 IMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 176 l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
+.+.+. +.||+++++++|+++. .+. +.+.+ . .++..++.+|.||+|+|..
T Consensus 206 l~~~l~-~~GV~i~~~~~v~~v~--~~~---v~~~~------~----~~~g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 206 VEDLFA-ERNIDWIANVAVKAIE--PDK---VIYED------L----NGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp HHHHHH-HTTCEEECSCEEEEEC--SSE---EEEEC------T----TSCEEEEECSEEEEECEEE
T ss_pred HHHHHH-HCCCEEEeCCEEEEEe--CCe---EEEEe------c----CCCceEEeeeEEEECCCCc
Confidence 334443 6799999999999884 333 22221 0 0134789999999999944
No 300
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.71 E-value=0.036 Score=45.21 Aligned_cols=33 Identities=18% Similarity=0.323 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|+|+|+|..|..+|..|.+. |.+|+++++..
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 5799999999999999999999 99999999874
No 301
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.70 E-value=0.034 Score=44.38 Aligned_cols=33 Identities=21% Similarity=0.429 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..++|+|+|..|...|..|.++ |++|+++|+.+
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~-g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA-GKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 3699999999999999999999 99999999864
No 302
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.64 E-value=0.036 Score=43.80 Aligned_cols=33 Identities=24% Similarity=0.437 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|+|||+|..|...|..|.+. |.+|+++|+..
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~-g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK-GHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 4699999999999999999999 99999999863
No 303
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.44 E-value=0.051 Score=43.54 Aligned_cols=33 Identities=27% Similarity=0.415 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
-.|+|+|.|..|...|..|.+. |++|+++|++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~-g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS-DIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 4799999999999999999999 99999999874
No 304
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.16 E-value=0.057 Score=43.86 Aligned_cols=32 Identities=13% Similarity=0.317 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEecc
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~ 123 (356)
-.++|+|+|..|...|..|.+. |.+|+++|+.
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~-g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQR-GQNVTVISNL 35 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCCEEEEECC
T ss_pred CcEEEECCCHHHHHHHHHHHHC-CCCEEEEECC
Confidence 4799999999999999999999 9999999986
No 305
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=93.72 E-value=0.07 Score=40.65 Aligned_cols=33 Identities=24% Similarity=0.416 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCC-CeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPN-IQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G-~~V~llEk~~ 124 (356)
..|+|+|+|..|..++..|.+. | .+|+++++..
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~-g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTS-SNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-SSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCH
Confidence 4699999999999999999999 8 8999999863
No 306
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.71 E-value=0.059 Score=42.65 Aligned_cols=32 Identities=22% Similarity=0.316 Sum_probs=29.5
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.|+|+|+|..|...|..|.+. |.+|+++++..
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~-g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRM-GHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 599999999999999999999 99999999863
No 307
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.91 E-value=0.088 Score=48.92 Aligned_cols=34 Identities=15% Similarity=0.346 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~ 124 (356)
...|.|||+|..|...|..|++. |+ +|+++|...
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~-g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALR-ELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCh
Confidence 35799999999999999999998 87 999999874
No 308
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.89 E-value=0.09 Score=50.95 Aligned_cols=33 Identities=21% Similarity=0.284 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|.|||.|.+|+++|..|.++ |++|++.|+..
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~-G~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKL-GAIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHT-TCEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-CCEEEEEeCCc
Confidence 5799999999999999999999 99999999854
No 309
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=92.81 E-value=0.15 Score=49.18 Aligned_cols=58 Identities=12% Similarity=0.078 Sum_probs=47.6
Q ss_pred hHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEe--CCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVK--GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~--~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
...+.+.|.+.+. +.|++++++++|++|..+ ++++.+|.+. ..+++||.||+|+|.+.
T Consensus 241 ~~~l~~al~~~~~-~~G~~i~~~~~V~~i~~~~~~~~~~~V~~~---------------g~~~~ad~VV~a~~~~~ 300 (453)
T 2bcg_G 241 LGELPQGFARLSA-IYGGTYMLDTPIDEVLYKKDTGKFEGVKTK---------------LGTFKAPLVIADPTYFP 300 (453)
T ss_dssp TTHHHHHHHHHHH-HTTCEEECSCCCCEEEEETTTTEEEEEEET---------------TEEEECSCEEECGGGCG
T ss_pred HHHHHHHHHHHHH-HcCCEEECCCEEEEEEEECCCCeEEEEEEC---------------CeEEECCEEEECCCccc
Confidence 3567788777776 569999999999999998 8888888763 36799999999999764
No 310
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=92.67 E-value=0.086 Score=48.73 Aligned_cols=33 Identities=24% Similarity=0.436 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
-.|.|||+|..|...|..++.. |++|+|+|..+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~-G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG-GFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 4799999999999999999999 99999999764
No 311
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=92.45 E-value=0.94 Score=43.19 Aligned_cols=46 Identities=17% Similarity=0.096 Sum_probs=32.0
Q ss_pred cCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 182 ARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 182 ~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
++.||++++++.|+++. .+++. ..+ .+++..++.+|.||+|+|..+
T Consensus 211 ~~~GV~~~~~~~v~~v~--~~~~~---~~~----------~~g~~~~i~~d~vi~~~G~~~ 256 (430)
T 3hyw_A 211 AERNIDWIANVAVKAIE--PDKVI---YED----------LNGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHTTCEEECSCEEEEEC--SSEEE---EEC----------TTSCEEEEECSEEEEECEEEC
T ss_pred HhCCeEEEeCceEEEEe--CCceE---EEe----------eCCCceEeecceEEEeccCCC
Confidence 46799999999999874 34332 211 012357899999999999544
No 312
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=92.15 E-value=0.12 Score=49.71 Aligned_cols=58 Identities=14% Similarity=0.113 Sum_probs=47.2
Q ss_pred hHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
...+.+.|.+.+. +.|++++++++|++|..+++++.+|..+ +.+++||.||+|+|...
T Consensus 233 ~~~l~~~l~~~~~-~~G~~i~~~~~V~~I~~~~~~v~~v~~~---------------g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 233 LGELPQGFARLSA-IYGGTYMLNKPVDDIIMENGKVVGVKSE---------------GEVARCKQLICDPSYVP 290 (433)
T ss_dssp TTHHHHHHHHHHH-HHTCCCBCSCCCCEEEEETTEEEEEEET---------------TEEEECSEEEECGGGCG
T ss_pred HHHHHHHHHHHHH-HcCCEEECCCEEEEEEEeCCEEEEEEEC---------------CeEEECCEEEECCCCCc
Confidence 3567777777665 5699999999999999999988887652 36799999999999664
No 313
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=92.04 E-value=1.4 Score=43.11 Aligned_cols=34 Identities=24% Similarity=0.447 Sum_probs=29.2
Q ss_pred ccEEEECCCHHHHHHHHHhhcC-CCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKN-PNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~-~G~~V~llEk~~ 124 (356)
..|+|||+|.+|.-.+..|++. ++.+|.++-|..
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 4699999999999999999862 378999998875
No 314
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.67 E-value=0.15 Score=44.59 Aligned_cols=33 Identities=18% Similarity=0.342 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEecc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~ 123 (356)
...|+|||||..|...+..|.+. |.+|+|++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~-GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQE-GAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGG-CCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEECCC
Confidence 46899999999999999999999 9999999865
No 315
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=91.66 E-value=0.14 Score=44.17 Aligned_cols=32 Identities=16% Similarity=0.333 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.|+|+|+|..|...|..|.+. |.+|+++|+..
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-KYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 589999999999999999999 99999999864
No 316
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=91.59 E-value=0.17 Score=46.57 Aligned_cols=33 Identities=21% Similarity=0.396 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|.|||+|..|...|..|++. |.+|+++.+..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-GHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-TCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCh
Confidence 4799999999999999999999 99999999864
No 317
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=91.41 E-value=0.19 Score=47.81 Aligned_cols=35 Identities=29% Similarity=0.472 Sum_probs=32.2
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSP 126 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~ 126 (356)
-.|+|||+|..|+.+|..|++. |.+|+++|+.+.+
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtvv~~~~~~ 187 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKF-GVNVTLLEALPRV 187 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCeEEEEecCCch
Confidence 5799999999999999999999 9999999998654
No 318
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=91.28 E-value=0.17 Score=45.71 Aligned_cols=33 Identities=21% Similarity=0.410 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|.|||+|..|...|..|++. |++|+++|+..
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-GFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 3699999999999999999999 99999999874
No 319
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=90.81 E-value=0.18 Score=46.19 Aligned_cols=33 Identities=21% Similarity=0.359 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|.|||+|..|.+.|..|++. |.+|+++.+..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS-GEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT-SCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCeEEEEEcCc
Confidence 4699999999999999999999 99999999864
No 320
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=90.63 E-value=0.22 Score=45.99 Aligned_cols=33 Identities=24% Similarity=0.436 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|.|||+|.-|...|..|++. |++|+++|+.+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~-G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG-GFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4699999999999999999999 99999999874
No 321
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=90.56 E-value=0.47 Score=46.55 Aligned_cols=60 Identities=10% Similarity=0.045 Sum_probs=42.1
Q ss_pred HHHHHHcCCCcEEEcCeEEEEEEEeC-C-eEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCCC
Q 018414 176 IMSKLLARPNVKLFNAVAAEDLIVKG-G-RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242 (356)
Q Consensus 176 l~~~~~~~~gv~i~~~~~v~~i~~~~-~-~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~~ 242 (356)
++..+.+..|++|+.++.|++|+.++ + +++||.+.+ .+ +..+...+++|+.||+|+|+++
T Consensus 232 ~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~------~~-g~~~~~~~~~A~~VIlaaGa~~ 293 (507)
T 1coy_A 232 YLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQID------EQ-GNVVATKVVTADRVFFAAGSVG 293 (507)
T ss_dssp HHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEEC------TT-SCEEEEEEEEEEEEEECSHHHH
T ss_pred HHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC------CC-CcccccEEEEeCEEEEccCccC
Confidence 34444446679999999999999986 4 789988742 00 0000136789999999999763
No 322
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=90.54 E-value=0.16 Score=45.91 Aligned_cols=34 Identities=21% Similarity=0.598 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
...|+|||||-.|...+..|.+. |.+|+|++...
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~-Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPT-GCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGG-TCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhC-CCEEEEEcCCC
Confidence 35799999999999999999999 99999999764
No 323
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=90.32 E-value=0.29 Score=44.42 Aligned_cols=32 Identities=22% Similarity=0.387 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.|.|||+|..|...|..|++. |++|+++|+..
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~-G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAAT-GHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 599999999999999999999 99999999864
No 324
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.18 E-value=0.21 Score=44.27 Aligned_cols=34 Identities=21% Similarity=0.500 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~ 124 (356)
...|+|||+|..|..+|..|++. |. +++|+|+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~-Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASA-GVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHc-CCCeEEEEcCCC
Confidence 36799999999999999999998 86 899999874
No 325
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=90.17 E-value=0.21 Score=48.49 Aligned_cols=33 Identities=27% Similarity=0.481 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|+|+|+|-.|...|..|.+. |++|++||+.+
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~-~~~v~vId~d~ 36 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGE-NNDITIVDKDG 36 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCST-TEEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 4699999999999999999999 99999999864
No 326
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=90.10 E-value=0.29 Score=46.61 Aligned_cols=35 Identities=20% Similarity=0.315 Sum_probs=31.5
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
....|+|||+|.+|+.+|..|... |.+|+++|+..
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL-GAVVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 346899999999999999999989 99999999874
No 327
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=90.09 E-value=0.3 Score=45.20 Aligned_cols=33 Identities=18% Similarity=0.430 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~ 124 (356)
..|.|||+|..|...|..|++. |+ +|+++|...
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~-g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK-DLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCH
Confidence 4799999999999999999999 88 999999864
No 328
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=90.06 E-value=0.28 Score=45.37 Aligned_cols=32 Identities=25% Similarity=0.395 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEecc
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~ 123 (356)
..|.|||+|..|...|..|++. |.+|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~-g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA-GEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT-TCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEEECh
Confidence 4799999999999999999999 9999999985
No 329
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.04 E-value=0.28 Score=44.80 Aligned_cols=33 Identities=27% Similarity=0.530 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCC--eEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~llEk~~ 124 (356)
..|+|||+|..|...|..|++. |. +|+++++..
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~-g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQR-GIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCh
Confidence 4799999999999999999998 88 999999864
No 330
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=89.76 E-value=0.22 Score=48.03 Aligned_cols=35 Identities=26% Similarity=0.595 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCCC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSP 126 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~~ 126 (356)
..|+|||.|.+|+++|..|.++ |++|++.|.....
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~-G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLAR-GVTPRVMDTRMTP 40 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTT-TCCCEEEESSSSC
T ss_pred CEEEEEeecHHHHHHHHHHHhC-CCEEEEEECCCCc
Confidence 3699999999999999999999 9999999987543
No 331
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=89.63 E-value=0.22 Score=39.88 Aligned_cols=33 Identities=15% Similarity=0.293 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|+|||+|..|...+..|.+. |.+|+++++..
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~-g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYP-QYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTT-TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEcCCH
Confidence 5799999999999999999888 89999998863
No 332
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=89.57 E-value=0.34 Score=43.31 Aligned_cols=32 Identities=19% Similarity=0.227 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.|.|||+|..|...|..|++. |.+|+++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-GHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhC-CCCEEEEEcCc
Confidence 489999999999999999999 99999999875
No 333
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=89.18 E-value=0.3 Score=46.21 Aligned_cols=35 Identities=29% Similarity=0.486 Sum_probs=31.7
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccC
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~ 124 (356)
.+..|+|+|+|.+|+.+|..|... |. +|.++|+..
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~-Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAA-GATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH-TCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHc-CCCeEEEEECCC
Confidence 457899999999999999999888 88 999999974
No 334
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=89.06 E-value=0.43 Score=43.80 Aligned_cols=33 Identities=27% Similarity=0.333 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCC-CeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPN-IQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G-~~V~llEk~~ 124 (356)
..|.|||.|..|...|..|++. | .+|+++++..
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-NAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-CCCeEEEEeCCC
Confidence 4799999999999999999999 9 9999999874
No 335
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=88.95 E-value=0.37 Score=45.12 Aligned_cols=33 Identities=27% Similarity=0.377 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
-.|+|+|+|.+|..++..|... |.+|+++++..
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~-Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGL-GAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 5799999999999999999999 99999999863
No 336
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=88.93 E-value=0.36 Score=47.14 Aligned_cols=34 Identities=18% Similarity=0.351 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
...|.|||.|..|+..|..|++. |.+|+++++..
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~-G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADI-GHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 35899999999999999999999 99999999863
No 337
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=88.92 E-value=0.45 Score=40.79 Aligned_cols=34 Identities=9% Similarity=0.241 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~ 125 (356)
..|.|||+|..|...|..|++. |.+|.++++...
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~-g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIA-GHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHH
Confidence 4699999999999999999999 999999998753
No 338
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=88.90 E-value=0.24 Score=44.91 Aligned_cols=33 Identities=27% Similarity=0.533 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|.|||+|..|.+.|..|++. |.+|++++|..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~-g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS-LPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-CTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHC-CCeEEEEEecc
Confidence 3699999999999999999999 89999999873
No 339
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=88.86 E-value=0.29 Score=46.24 Aligned_cols=34 Identities=18% Similarity=0.234 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
...|+|||+|..|+.+|..|... |.+|+++|+..
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRL-GAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 45899999999999999999888 99999999874
No 340
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=88.72 E-value=0.4 Score=43.34 Aligned_cols=32 Identities=22% Similarity=0.402 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.|.|||+|..|...|..|++. |.+|+++++..
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQG-GNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhC-CCcEEEEECCH
Confidence 699999999999999999999 99999999863
No 341
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=88.68 E-value=0.45 Score=44.53 Aligned_cols=33 Identities=21% Similarity=0.370 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|.|||+|.-|.+.|..|+++ |.+|.++++.+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~-G~~V~l~~r~~ 62 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK-GQKVRLWSYES 62 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT-TCCEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 5799999999999999999999 99999999863
No 342
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=88.67 E-value=0.42 Score=43.59 Aligned_cols=32 Identities=31% Similarity=0.613 Sum_probs=29.3
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|.|||+|..|.+.|..|+ . |.+|+++.+..
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~-g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-L-YHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-c-CCceEEEECCH
Confidence 47999999999999999999 8 99999999864
No 343
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=88.57 E-value=0.39 Score=45.75 Aligned_cols=34 Identities=24% Similarity=0.337 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
...|+|||+|.+|+.++..|... |.+|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSL-GAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 35799999999999999999888 99999999864
No 344
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=88.49 E-value=0.42 Score=44.19 Aligned_cols=33 Identities=18% Similarity=0.238 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|.|||+|..|...|..|++. |.+|+++++..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-GQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 4799999999999999999999 99999999853
No 345
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=88.48 E-value=0.49 Score=43.50 Aligned_cols=32 Identities=25% Similarity=0.587 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCC-eEEEEecc
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQS 123 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~ 123 (356)
..|.|||+|..|..+|+.|++. |+ +|+++|..
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~-g~~~v~l~D~~ 41 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQK-ELADVVLVDIP 41 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEecc
Confidence 5799999999999999999999 88 99999987
No 346
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.25 E-value=0.38 Score=44.22 Aligned_cols=33 Identities=33% Similarity=0.651 Sum_probs=28.8
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCC--eEEEEecc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQS 123 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~--~V~llEk~ 123 (356)
...|+|||+|..|..+|+.|+.. +. .+.++|..
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~-~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQ-SIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-CSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCC
Confidence 36899999999999999999987 64 89999864
No 347
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=88.17 E-value=0.45 Score=43.41 Aligned_cols=32 Identities=25% Similarity=0.476 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCC--eEEEEeccC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~--~V~llEk~~ 124 (356)
.|+|||+|..|...|+.|+.. |. +|.++|...
T Consensus 2 kI~VIGaG~vG~~la~~la~~-g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLR-GSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCH
Confidence 589999999999999999998 88 999999764
No 348
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=88.14 E-value=0.47 Score=42.49 Aligned_cols=32 Identities=19% Similarity=0.360 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEecc
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~ 123 (356)
..++|+|+|.+|..+|..|++. |.+|+++.|.
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~-G~~V~v~~R~ 151 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSL-DCAVTITNRT 151 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHc-CCEEEEEECC
Confidence 4699999999999999999999 8999999876
No 349
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=88.04 E-value=0.4 Score=45.29 Aligned_cols=35 Identities=23% Similarity=0.360 Sum_probs=31.5
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccC
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~ 124 (356)
.+..|+|+|+|.+|..+|..|... |. +|+++|+..
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~-G~~~I~v~Dr~G 226 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDL-GVKNVVAVDRKG 226 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-TCCEEEEEETTE
T ss_pred CCcEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCC
Confidence 467899999999999999999988 87 899999873
No 350
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=88.03 E-value=0.38 Score=43.25 Aligned_cols=33 Identities=24% Similarity=0.402 Sum_probs=29.9
Q ss_pred ccEEEECC-CHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGA-GSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGg-G~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|.|||+ |..|...|..|.+. |++|+++++..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~-g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDS-AHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHS-SSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 36999999 99999999999999 99999998763
No 351
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=88.02 E-value=0.47 Score=44.85 Aligned_cols=34 Identities=21% Similarity=0.296 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
...|+|+|+|.+|+.++..|... |.+|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 45799999999999999999888 99999999864
No 352
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=88.01 E-value=0.45 Score=46.03 Aligned_cols=33 Identities=27% Similarity=0.399 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|.|||.|..|+..|..|++. |++|+++++..
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-GANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhc-CCEEEEEECCH
Confidence 3699999999999999999999 99999999864
No 353
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=87.93 E-value=0.4 Score=39.87 Aligned_cols=34 Identities=24% Similarity=0.208 Sum_probs=29.0
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
-.|+|+|.|..|..+|..|.+..|.+|+++|+..
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 4699999999999999999763168999999874
No 354
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=87.71 E-value=0.74 Score=44.88 Aligned_cols=44 Identities=9% Similarity=0.129 Sum_probs=32.9
Q ss_pred CCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 183 RPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 183 ~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
+.|+++++++.|+++..+ +++.++... +..++.+|.||+|+|-.
T Consensus 269 ~~GV~v~~~~~v~~i~~~-~~v~~v~~~--------------~g~~i~aD~Vv~a~G~~ 312 (493)
T 1y56_A 269 RWGIDYVHIPNVKRVEGN-EKVERVIDM--------------NNHEYKVDALIFADGRR 312 (493)
T ss_dssp HHTCEEEECSSEEEEECS-SSCCEEEET--------------TCCEEECSEEEECCCEE
T ss_pred hCCcEEEeCCeeEEEecC-CceEEEEeC--------------CCeEEEeCEEEECCCcC
Confidence 459999999999998754 345455543 23679999999999944
No 355
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=87.68 E-value=0.5 Score=43.54 Aligned_cols=33 Identities=21% Similarity=0.401 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~ 124 (356)
..|.|||+|..|..+|..|+.. |+ +|.++|...
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~-g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK-NLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEeCCH
Confidence 4799999999999999999998 87 999999764
No 356
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=87.61 E-value=0.51 Score=44.31 Aligned_cols=34 Identities=24% Similarity=0.374 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
...|+|+|+|..|..+|..|... |.+|+++++..
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~-Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGM-GAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 35799999999999999999999 99999999763
No 357
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=87.49 E-value=0.46 Score=43.55 Aligned_cols=33 Identities=24% Similarity=0.559 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~ 124 (356)
..|.|||+|..|...|..|++. |+ +|+++|+..
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-NLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCc
Confidence 4699999999999999999998 88 999999864
No 358
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=87.46 E-value=0.53 Score=45.01 Aligned_cols=33 Identities=15% Similarity=0.353 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|+|||.|..|...|..|.+. |.+|++||++.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~-g~~vvvId~d~ 37 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS-GVKMVVLDHDP 37 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEEECCH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 4699999999999999999999 99999999864
No 359
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=87.16 E-value=0.61 Score=42.90 Aligned_cols=33 Identities=24% Similarity=0.510 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCC--eEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~llEk~~ 124 (356)
..|.|||+|..|..+|+.|+.. +. ++.++|...
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~-~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALR-QTANELVLIDVFK 42 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCSSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCh
Confidence 6899999999999999999998 77 899999764
No 360
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=87.11 E-value=0.58 Score=43.10 Aligned_cols=33 Identities=27% Similarity=0.369 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEecc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~ 123 (356)
+..|.|||+|..|...|..|++. |.+|.++++.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-GEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-CCeEEEEeCC
Confidence 46899999999999999999999 9999999885
No 361
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=87.01 E-value=0.63 Score=42.33 Aligned_cols=34 Identities=24% Similarity=0.378 Sum_probs=30.5
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
++..|.|||+|..|...|..|+ . |++|+++|+..
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-a-G~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-S-KHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-c-CCEEEEEECCH
Confidence 3568999999999999999999 8 99999999864
No 362
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=86.86 E-value=0.58 Score=45.40 Aligned_cols=32 Identities=25% Similarity=0.422 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.|.|||+|..|...|..|++. |++|+++|+..
T Consensus 39 kV~VIGaG~MG~~iA~~la~~-G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARV-GISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 599999999999999999999 99999999864
No 363
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=86.77 E-value=0.37 Score=41.63 Aligned_cols=33 Identities=24% Similarity=0.355 Sum_probs=29.3
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEE-EeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAI-IEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~l-lEk~~ 124 (356)
..|.|||+|..|...|..|++. |.+|++ +++..
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-QIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-TCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCCH
Confidence 4799999999999999999999 999998 77653
No 364
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=86.49 E-value=0.62 Score=42.66 Aligned_cols=31 Identities=23% Similarity=0.412 Sum_probs=28.5
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEecc
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~ 123 (356)
..|.|||+|..|...|..|++. |.+|+++ +.
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~-G~~V~l~-~~ 50 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARA-GHEVILI-AR 50 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-TCEEEEE-CC
T ss_pred CcEEEECcCHHHHHHHHHHHHC-CCeEEEE-Ec
Confidence 4699999999999999999999 9999999 54
No 365
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=86.49 E-value=0.68 Score=44.73 Aligned_cols=35 Identities=14% Similarity=0.348 Sum_probs=32.1
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~ 125 (356)
...+.|||.|..|+..|..|++. |++|+++++...
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-GHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCHH
Confidence 36799999999999999999999 999999998753
No 366
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=86.38 E-value=0.65 Score=43.74 Aligned_cols=34 Identities=29% Similarity=0.527 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
...|+|||+|..|..+|..|... |.+|+++++..
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGM-GATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 35799999999999999999988 99999999763
No 367
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=86.30 E-value=0.76 Score=41.24 Aligned_cols=34 Identities=26% Similarity=0.534 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
...++|||+|.+|.++++.|.+. |.+|.|+.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~-G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQ-GLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 35799999999999999999999 89999998874
No 368
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=86.27 E-value=0.69 Score=42.95 Aligned_cols=33 Identities=18% Similarity=0.472 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~ 125 (356)
.|+|+|||..|..+++.+.+. |++|+++|..+.
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~-G~~vv~vd~~~~ 35 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKA-GMKVVLVDKNPQ 35 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESCTT
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCCC
Confidence 489999999999999999889 999999997653
No 369
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=86.23 E-value=0.63 Score=42.66 Aligned_cols=33 Identities=21% Similarity=0.427 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|.|||.|..|...|..|++. |++|+++++..
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEA-GYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhC-CCeEEEEcCCH
Confidence 4799999999999999999999 99999999864
No 370
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=86.20 E-value=0.77 Score=42.39 Aligned_cols=33 Identities=12% Similarity=0.308 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~ 124 (356)
..|.|||+|..|.+.|+.|+.. ++ ++.++|...
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~-~~~~v~L~Di~~ 41 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLK-ELGDVVLFDIAE 41 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEeCCc
Confidence 4799999999999999999998 88 999999864
No 371
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=86.00 E-value=0.79 Score=39.37 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|.|||+|..|...|..|.+. |.+|.++++..
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~-g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGS-GFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4699999999999999999999 99999998863
No 372
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=85.95 E-value=0.67 Score=44.92 Aligned_cols=34 Identities=18% Similarity=0.359 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~ 125 (356)
..|.|||+|.-|...|..|++. |++|+++|+...
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a-G~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA-GIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEEECcHH
Confidence 3699999999999999999999 999999998753
No 373
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=85.77 E-value=0.78 Score=41.68 Aligned_cols=33 Identities=18% Similarity=0.412 Sum_probs=29.8
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCC-eEEEEecc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQS 123 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~ 123 (356)
...++|||+|.+|..+|..|.+. |. +|+|+.|.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~-G~~~V~v~nR~ 174 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLST-AAERIDMANRT 174 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCSEEEEECSS
T ss_pred CCEEEEECcHHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence 35799999999999999999999 87 89999876
No 374
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=85.66 E-value=0.7 Score=42.39 Aligned_cols=33 Identities=36% Similarity=0.621 Sum_probs=28.7
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCC--eEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~llEk~~ 124 (356)
..|.|||+|..|.+.|+.|+.. +. ++.++|...
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~-~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ-GIADEIVLIDANE 41 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCCCEEEEEeCCc
Confidence 5799999999999999999886 54 899999753
No 375
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=85.60 E-value=0.6 Score=44.87 Aligned_cols=32 Identities=25% Similarity=0.374 Sum_probs=29.5
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.|.|||.|..|+..|..|++. |.+|+++++..
T Consensus 2 kI~VIG~G~vG~~~A~~la~~-G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR-GHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 489999999999999999999 99999999863
No 376
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=85.59 E-value=0.49 Score=41.08 Aligned_cols=32 Identities=25% Similarity=0.451 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
-.++|+|+|..|...|..|.+. |. |+++|+..
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~-g~-v~vid~~~ 41 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGS-EV-FVLAEDEN 41 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTS-EE-EEEESCGG
T ss_pred CEEEEECCChHHHHHHHHHHhC-Ce-EEEEECCH
Confidence 4699999999999999999998 89 99999875
No 377
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=85.55 E-value=0.83 Score=41.74 Aligned_cols=33 Identities=21% Similarity=0.414 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~ 124 (356)
..|.|||+|..|...|+.|+.. |. +|.++|...
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~-g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAK-ELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCCc
Confidence 3699999999999999999998 76 899999764
No 378
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=85.54 E-value=0.81 Score=41.82 Aligned_cols=33 Identities=21% Similarity=0.543 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHhhcCC-CCeEEEEeccC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNP-NIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~-G~~V~llEk~~ 124 (356)
.|.|||+|..|...|..|++.+ +.+|+++|+..
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 5899999999999999999841 78999999874
No 379
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=85.32 E-value=0.76 Score=44.80 Aligned_cols=34 Identities=26% Similarity=0.433 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.-.|+|+|+|..|..+|..|+.. |.+|++.|+.+
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~-GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQA-GARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 35699999999999999999999 99999998763
No 380
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=85.28 E-value=0.94 Score=41.48 Aligned_cols=33 Identities=27% Similarity=0.351 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCC--eEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~llEk~~ 124 (356)
..|.|||.|..|.+.|..|.+. |. +|+++++..
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~-G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-CCCCEEEEEECCH
Confidence 4799999999999999999999 88 999999864
No 381
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=85.23 E-value=0.91 Score=39.79 Aligned_cols=34 Identities=21% Similarity=0.325 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
...|.|||.|..|...|..|++. |++|++.++..
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~-G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADL-GHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCh
Confidence 35799999999999999999999 99999999874
No 382
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=85.19 E-value=0.61 Score=41.77 Aligned_cols=33 Identities=21% Similarity=0.376 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..++|+|+|.+|..+|..|++. |.+|+|+.|..
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~-G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQA-QQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHT-TCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 4699999999999999999999 89999998873
No 383
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=85.18 E-value=0.81 Score=41.22 Aligned_cols=31 Identities=39% Similarity=0.699 Sum_probs=28.5
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEecc
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~ 123 (356)
..++|+|+|..|.++|..|++. | +|+++.+.
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~-G-~V~v~~r~ 159 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKD-N-NIIIANRT 159 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSS-S-EEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHC-C-CEEEEECC
Confidence 4699999999999999999999 9 99999876
No 384
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=85.14 E-value=0.85 Score=41.32 Aligned_cols=33 Identities=21% Similarity=0.227 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|.|||.|..|...|..|++. |++|+++++..
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA-GLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 4799999999999999999999 99999999864
No 385
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=85.11 E-value=0.97 Score=38.33 Aligned_cols=32 Identities=22% Similarity=0.323 Sum_probs=29.1
Q ss_pred cEEEEC-CCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 92 DVVVVG-AGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIG-gG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.|.||| +|..|...|..|++. |.+|.++++..
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~-g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATL-GHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTT-TCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 489999 999999999999999 99999999863
No 386
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=85.08 E-value=0.87 Score=40.84 Aligned_cols=32 Identities=25% Similarity=0.314 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.|.|||.|..|...|..|++. |++|+++++..
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 34 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKA-GCSVTIWNRSP 34 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSG
T ss_pred EEEEEeecHHHHHHHHHHHHC-CCeEEEEcCCH
Confidence 589999999999999999999 99999999875
No 387
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=84.98 E-value=0.99 Score=41.57 Aligned_cols=33 Identities=18% Similarity=0.319 Sum_probs=29.7
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~ 124 (356)
..|.|||+|..|.+.|+.|+.. ++ ++.++|...
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~-~~~~v~l~Di~~ 39 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIK-QLGDVVLFDIAQ 39 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCh
Confidence 4799999999999999999998 77 999999764
No 388
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=84.97 E-value=0.76 Score=40.68 Aligned_cols=34 Identities=21% Similarity=0.480 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~ 124 (356)
...|+|||+|..|..+|..|++. |. +++|+|...
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~-Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGA-GVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHT-TCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHc-CCCeEEEEeCCC
Confidence 46899999999999999999999 76 788998764
No 389
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=84.96 E-value=0.79 Score=42.15 Aligned_cols=34 Identities=9% Similarity=0.188 Sum_probs=29.7
Q ss_pred ccEEEECCCHHHHH-HHHHhhcCCCCeEEEEeccCC
Q 018414 91 TDVVVVGAGSAGLS-CAYELSKNPNIQIAIIEQSVS 125 (356)
Q Consensus 91 ~DVvIIGgG~aGl~-aA~~La~~~G~~V~llEk~~~ 125 (356)
..|.|||.|.+|++ +|..|.++ |++|.+.|+...
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~-G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEA-GFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHT-TCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhC-CCEEEEEcCCCC
Confidence 36999999999996 78888889 999999998753
No 390
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=84.83 E-value=0.8 Score=41.43 Aligned_cols=34 Identities=12% Similarity=0.229 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~ 125 (356)
..|.|||.|..|...|..|++. |++|+++++...
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~-G~~V~~~dr~~~ 49 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW-PGGVTVYDIRIE 49 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS-TTCEEEECSSTT
T ss_pred CeEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCHH
Confidence 4799999999999999999999 999999998754
No 391
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=84.58 E-value=0.68 Score=42.28 Aligned_cols=32 Identities=19% Similarity=0.269 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCC-eEEEEecc
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQS 123 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~ 123 (356)
..|.|||.|..|...|..|++. |+ +|+++++.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~-G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQA-GAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-SCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-CCCeEEEEcCC
Confidence 4799999999999999999999 99 99999985
No 392
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=84.49 E-value=0.7 Score=42.25 Aligned_cols=30 Identities=27% Similarity=0.375 Sum_probs=28.4
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCCeEEEEec
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQ 122 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~llEk 122 (356)
.|.|||+|..|...|..|++. |.+|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-GNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-CCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEEc
Confidence 489999999999999999999 999999998
No 393
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=84.40 E-value=0.97 Score=41.53 Aligned_cols=33 Identities=18% Similarity=0.428 Sum_probs=29.7
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCC-eEEEEecc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQS 123 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~ 123 (356)
...++|+|+|.+|.++|+.|++. |. +|+|+.|.
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~-Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALD-GVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT-TCSEEEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHHHC-CCCEEEEEECC
Confidence 35799999999999999999999 88 89999886
No 394
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=84.39 E-value=0.73 Score=42.28 Aligned_cols=32 Identities=25% Similarity=0.482 Sum_probs=29.0
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCC--eEEEEeccC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~--~V~llEk~~ 124 (356)
.|.|||+|..|...|..|++. |. +|+++|+..
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-GFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCeEEEEeCCh
Confidence 489999999999999999998 88 999999763
No 395
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=84.38 E-value=0.86 Score=42.10 Aligned_cols=32 Identities=31% Similarity=0.604 Sum_probs=28.8
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCC--eEEEEecc
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQS 123 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~llEk~ 123 (356)
..|.|||+|..|.++|+.|+.. +. ++.++|..
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~-~~~~~l~l~D~~ 39 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQ-GITDELVVIDVN 39 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCceEEEEecc
Confidence 4799999999999999999987 76 89999974
No 396
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=84.37 E-value=0.91 Score=41.33 Aligned_cols=33 Identities=21% Similarity=0.431 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|.|||.|..|...|..|++. |++|+++++..
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~-G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKN-GFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 4699999999999999999999 99999999875
No 397
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=84.23 E-value=0.77 Score=43.01 Aligned_cols=33 Identities=9% Similarity=0.175 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHhhcCCC-------CeEEEEeccCC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPN-------IQIAIIEQSVS 125 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G-------~~V~llEk~~~ 125 (356)
.|.|||+|..|...|..|++. | .+|+++++...
T Consensus 23 kI~iIGaG~mG~alA~~L~~~-G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTN-AKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-HHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHc-CCccCCCCCeEEEEECChh
Confidence 699999999999999999998 8 89999998753
No 398
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=84.20 E-value=0.85 Score=44.17 Aligned_cols=33 Identities=21% Similarity=0.323 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEecc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~ 123 (356)
...|+|||+|..|...+..|.+. |.+|+|+++.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~-ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEA-GARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-cCEEEEEcCC
Confidence 35799999999999999999999 9999999975
No 399
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=84.18 E-value=0.99 Score=40.76 Aligned_cols=33 Identities=30% Similarity=0.526 Sum_probs=29.5
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCC-eEEEEecc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQS 123 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~ 123 (356)
...++|+|+|.+|.++++.|++. |. +|+|+.|.
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~-G~~~v~i~~R~ 160 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTH-GVQKLQVADLD 160 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCCEEEEEECC
Confidence 45799999999999999999999 88 69999876
No 400
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=84.11 E-value=0.85 Score=44.44 Aligned_cols=35 Identities=17% Similarity=0.366 Sum_probs=31.5
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccCC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSVS 125 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~~ 125 (356)
..|.|||+|..|+..|..|++.+|+ +|+++|+...
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 4699999999999999999987679 9999998864
No 401
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=84.02 E-value=1.3 Score=45.03 Aligned_cols=98 Identities=17% Similarity=0.125 Sum_probs=66.6
Q ss_pred ccEEEEC--CCHHHHHHHHHhhcCCCCeEEEEeccCCCCCccccCCccchhhhccchHHHHHHHhCCCccccCCeEEEec
Q 018414 91 TDVVVVG--AGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKH 168 (356)
Q Consensus 91 ~DVvIIG--gG~aGl~aA~~La~~~G~~V~llEk~~~~Gg~~~~~g~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 168 (356)
-+|+||| +|..|+.+|..|++. |.+|+++++...+.....
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~-g~~Vtlv~~~~~l~~~~~------------------------------------- 565 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQK-GYEVSIVTPGAQVSSWTN------------------------------------- 565 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHT-TCEEEEEESSSSTTGGGG-------------------------------------
T ss_pred CEEEEEcCCCCccHHHHHHHHHhC-CCeeEEEecccccccccc-------------------------------------
Confidence 4699999 999999999999999 999999998764321000
Q ss_pred hHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
...+...+.+.+. +.||+++++++|+++.. +.+. +.... .++..++.+|.||+|+|..
T Consensus 566 ~~~~~~~l~~~l~-~~GV~i~~~~~V~~i~~--~~~~-v~~~~-----------~~~~~~i~aD~VV~A~G~~ 623 (690)
T 3k30_A 566 NTFEVNRIQRRLI-ENGVARVTDHAVVAVGA--GGVT-VRDTY-----------ASIERELECDAVVMVTARL 623 (690)
T ss_dssp GGTCHHHHHHHHH-HTTCEEEESEEEEEEET--TEEE-EEETT-----------TCCEEEEECSEEEEESCEE
T ss_pred cchhHHHHHHHHH-HCCCEEEcCcEEEEEEC--CeEE-EEEcc-----------CCeEEEEECCEEEECCCCC
Confidence 0001223344444 57999999999999863 3221 22110 1134689999999999943
No 402
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=83.77 E-value=2.4 Score=42.84 Aligned_cols=56 Identities=7% Similarity=-0.013 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeC--CeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCC
Q 018414 169 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG--GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCG 239 (356)
Q Consensus 169 ~~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtG 239 (356)
...+.+.|.+.+. ..|++|++++.|.+|..++ +++.||...+ +.+++||.||....
T Consensus 377 ~g~L~qaL~r~~~-~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~--------------Ge~i~A~~VVs~~~ 434 (650)
T 1vg0_A 377 QGELPQCFCRMCA-VFGGIYCLRHSVQCLVVDKESRKCKAVIDQF--------------GQRIISKHFIIEDS 434 (650)
T ss_dssp TTHHHHHHHHHHH-HTTCEEESSCCEEEEEEETTTCCEEEEEETT--------------SCEEECSEEEEEGG
T ss_pred hhHHHHHHHHHHH-HcCCEEEeCCEeeEEEEeCCCCeEEEEEeCC--------------CCEEEcCEEEEChh
Confidence 4566677766665 6799999999999999987 8898887532 46799999987444
No 403
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=83.70 E-value=0.91 Score=41.91 Aligned_cols=32 Identities=34% Similarity=0.613 Sum_probs=28.7
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCC--eEEEEecc
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQS 123 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~llEk~ 123 (356)
..|.|||+|..|.++|+.|+.. +. ++.++|..
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~-~~~~el~l~D~~ 43 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQ-GIAQEIGIVDIF 43 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCeEEEEeCC
Confidence 5799999999999999999987 66 89999974
No 404
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=83.54 E-value=1.3 Score=40.30 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|.|||+|..|...|..|++. |.+|+++++..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~-g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM-GHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 4699999999999999999999 99999999864
No 405
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=83.53 E-value=0.77 Score=42.75 Aligned_cols=32 Identities=28% Similarity=0.385 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.|.|||+|..|...|..|++. |++|.++++..
T Consensus 17 kI~iIG~G~mG~~la~~L~~~-G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK-CREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-EEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 699999999999999999999 99999998763
No 406
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=83.44 E-value=0.78 Score=44.73 Aligned_cols=34 Identities=24% Similarity=0.435 Sum_probs=29.5
Q ss_pred ccEEEECCCHHHHHHHHHhhcCC-CCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNP-NIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~-G~~V~llEk~~ 124 (356)
..|.|||.|..|+..|..|++.. |++|+++++..
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 47999999999999999999862 68999999753
No 407
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=83.37 E-value=1.4 Score=42.29 Aligned_cols=56 Identities=18% Similarity=0.120 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHcC-------CCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCC
Q 018414 170 ALFTSTIMSKLLAR-------PNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGH 240 (356)
Q Consensus 170 ~~~~~~l~~~~~~~-------~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg 240 (356)
..+.+.|.+.+.+. .+++|+++++|++|..+++++. |.+.+ +.+++||+||+|++.
T Consensus 206 ~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~-v~~~~--------------g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 206 EAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVT-VKTED--------------NSVYSADYVMVSASL 268 (472)
T ss_dssp THHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEE-EEETT--------------SCEEEESEEEECSCH
T ss_pred HHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEE-EEECC--------------CCEEEcCEEEEecCH
Confidence 35556666555322 2678999999999998877765 55532 357999999999994
No 408
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=83.29 E-value=1.1 Score=43.76 Aligned_cols=33 Identities=24% Similarity=0.373 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|.|||+|..|...|..|++. |++|+++|+..
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a-G~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH-GHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 3699999999999999999999 99999999874
No 409
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=83.13 E-value=0.96 Score=40.74 Aligned_cols=34 Identities=26% Similarity=0.413 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~ 124 (356)
...++|+|+|.+|.++|+.|.+. |. +|+|+.|..
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~-G~~~v~v~~R~~ 151 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKI-VRPTLTVANRTM 151 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTT-CCSCCEEECSCG
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCCEEEEEeCCH
Confidence 35799999999999999999999 88 899998874
No 410
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=82.97 E-value=1.3 Score=39.24 Aligned_cols=32 Identities=34% Similarity=0.593 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~ 124 (356)
.++|||+|.+|.++++.|.+. |. +|.|+.|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~-G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM-GVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHc-CCCEEEEEeCCH
Confidence 799999999999999999998 87 899998863
No 411
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=82.92 E-value=1.2 Score=41.31 Aligned_cols=34 Identities=24% Similarity=0.473 Sum_probs=30.0
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~ 124 (356)
...|+|||+|..|..+|..|++. |. +++|+|...
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~a-GVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHc-CCCEEEEecCCE
Confidence 46899999999999999999998 75 688898764
No 412
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=82.86 E-value=1.3 Score=40.17 Aligned_cols=33 Identities=36% Similarity=0.418 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|.|||.|..|...|..|.+. |++|+++++..
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~-G~~V~~~dr~~ 42 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQ-GKRVAIWNRSP 42 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4799999999999999999999 99999999864
No 413
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=82.81 E-value=1.2 Score=43.42 Aligned_cols=34 Identities=21% Similarity=0.342 Sum_probs=31.2
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
+.+|.|||.|..|...|..|+++ |.+|++.++..
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESR-GYTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTT-TCCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 46899999999999999999999 99999999863
No 414
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=82.70 E-value=1.3 Score=40.08 Aligned_cols=33 Identities=21% Similarity=0.412 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEecc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~ 123 (356)
...|.|||.|..|..+|..|... |.+|+++++.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~dr~ 187 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAAL-GAKVKVGARE 187 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-CCEEEEEECC
Confidence 45799999999999999999988 9999999976
No 415
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=82.69 E-value=0.99 Score=40.99 Aligned_cols=34 Identities=24% Similarity=0.389 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~ 124 (356)
...|+|||+|..|..+|..|++. |. +++|+|...
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~a-GVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRC-GIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHc-CCCEEEEECCCc
Confidence 46899999999999999999998 74 789999764
No 416
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=82.63 E-value=0.94 Score=41.25 Aligned_cols=32 Identities=19% Similarity=0.328 Sum_probs=29.0
Q ss_pred cEEEECCCHHHHHHHHHhhcCCC--CeEEEEeccC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPN--IQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G--~~V~llEk~~ 124 (356)
.|.|||+|..|...|..|++. | .+|+++|+..
T Consensus 3 kI~VIGaG~~G~~la~~L~~~-g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQ-GVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEcCCH
Confidence 599999999999999999998 8 6899999863
No 417
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=82.60 E-value=1.2 Score=39.89 Aligned_cols=32 Identities=19% Similarity=0.377 Sum_probs=29.3
Q ss_pred ccEEEEC-CCHHHHHHHHHhhcCCCCeEEEEecc
Q 018414 91 TDVVVVG-AGSAGLSCAYELSKNPNIQIAIIEQS 123 (356)
Q Consensus 91 ~DVvIIG-gG~aGl~aA~~La~~~G~~V~llEk~ 123 (356)
..++|+| +|.+|..+|..|++. |.+|+++.|.
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~-G~~V~i~~R~ 152 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGE-GAEVVLCGRK 152 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHC-cCEEEEEECC
Confidence 4699999 899999999999999 9999999876
No 418
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=82.59 E-value=0.93 Score=43.71 Aligned_cols=33 Identities=15% Similarity=0.203 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..+.|||.|-.||.+|..+++. |++|+.+|-+.
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~-G~~V~g~Did~ 54 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALL-GHRVVGYDVNP 54 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHhC-CCcEEEEECCH
Confidence 5799999999999999999999 99999999764
No 419
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=82.58 E-value=1.1 Score=38.18 Aligned_cols=32 Identities=19% Similarity=0.360 Sum_probs=29.5
Q ss_pred cEEEECC-CHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 92 DVVVVGA-GSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGg-G~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.|+|.|| |..|...+..|.++ |.+|.++.|..
T Consensus 6 ~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~ 38 (227)
T 3dhn_A 6 KIVLIGASGFVGSALLNEALNR-GFEVTAVVRHP 38 (227)
T ss_dssp EEEEETCCHHHHHHHHHHHHTT-TCEEEEECSCG
T ss_pred EEEEEcCCchHHHHHHHHHHHC-CCEEEEEEcCc
Confidence 5999996 99999999999999 99999999875
No 420
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=82.56 E-value=0.98 Score=42.70 Aligned_cols=29 Identities=14% Similarity=0.358 Sum_probs=27.3
Q ss_pred cEEEECCCHHHHHHHHHhhc-CCCCeEEEEe
Q 018414 92 DVVVVGAGSAGLSCAYELSK-NPNIQIAIIE 121 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~-~~G~~V~llE 121 (356)
.|.|||+|..|...|..|++ . |.+|++++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~-G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRD-GVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTST-TEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCC-CCEEEEEe
Confidence 69999999999999999987 6 89999999
No 421
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=82.51 E-value=1.3 Score=40.14 Aligned_cols=33 Identities=21% Similarity=0.394 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEecc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~ 123 (356)
...|.|||.|..|..+|..|... |.+|+++++.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~d~~ 189 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAAL-GANVKVGARS 189 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-CCEEEEEECC
Confidence 45799999999999999999988 9999999976
No 422
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=82.48 E-value=0.99 Score=41.02 Aligned_cols=32 Identities=28% Similarity=0.385 Sum_probs=28.7
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCC--eEEEEeccC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~--~V~llEk~~ 124 (356)
.|.|||+|..|.+.|+.|++. +. ++.++|...
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-LDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-SCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCeEEEEECCh
Confidence 489999999999999999998 77 899999764
No 423
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=82.46 E-value=2.1 Score=40.07 Aligned_cols=34 Identities=18% Similarity=0.354 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~ 125 (356)
..|+|||+|..|...+..+.+. |++|++++....
T Consensus 13 ~~IlIlG~G~lg~~la~aa~~l-G~~viv~d~~~~ 46 (377)
T 3orq_A 13 ATIGIIGGGQLGKMMAQSAQKM-GYKVVVLDPSED 46 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEECCCC
Confidence 4699999999999999999999 999999997643
No 424
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=82.41 E-value=1.4 Score=39.69 Aligned_cols=33 Identities=18% Similarity=0.367 Sum_probs=29.5
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCC-eEEEEecc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQS 123 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~ 123 (356)
...++|+|+|.+|..++..|++. |. +|.|+.|.
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~-G~~~v~v~~R~ 159 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQ-QPASITVTNRT 159 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-CCSEEEEEESS
T ss_pred CCEEEEECchHHHHHHHHHHHhc-CCCeEEEEECC
Confidence 35799999999999999999999 85 89999886
No 425
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=82.37 E-value=1.3 Score=39.37 Aligned_cols=32 Identities=25% Similarity=0.290 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.|.|||+|..|...|..|.+. |.+|.++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR-GHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 489999999999999999999 99999998763
No 426
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=82.34 E-value=1.4 Score=37.83 Aligned_cols=33 Identities=24% Similarity=0.261 Sum_probs=30.3
Q ss_pred ccEEEECC-CHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGA-GSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGg-G~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|+|.|| |..|..++..|.++ |.+|+++.|..
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~-G~~V~~~~R~~ 55 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNK-GHEPVAMVRNE 55 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSG
T ss_pred CeEEEECCCChHHHHHHHHHHhC-CCeEEEEECCh
Confidence 46999998 99999999999999 99999999874
No 427
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=82.21 E-value=0.93 Score=39.90 Aligned_cols=33 Identities=21% Similarity=0.221 Sum_probs=29.0
Q ss_pred ccEEEECC-C-HHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGA-G-SAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGg-G-~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.-++|.|| | ..|..+|.+|+++ |.+|+++++..
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~-G~~V~~~~r~~ 57 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLE-GADVVISDYHE 57 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCCCchHHHHHHHHHHC-CCEEEEecCCH
Confidence 35899999 7 5999999999999 99999998763
No 428
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=82.19 E-value=1.3 Score=40.50 Aligned_cols=33 Identities=21% Similarity=0.416 Sum_probs=29.6
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCC-eEEEEecc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQS 123 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~ 123 (356)
...++|+|+|.+|.++++.|++. |. +|+|+.|.
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~-G~~~v~v~nRt 181 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIE-GIKEIKLFNRK 181 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHc-CCCEEEEEECC
Confidence 35799999999999999999999 87 79999886
No 429
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=82.19 E-value=1.3 Score=39.63 Aligned_cols=33 Identities=18% Similarity=0.327 Sum_probs=29.4
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCC-eEEEEecc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQS 123 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~ 123 (356)
...++|+|+|.+|.++++.|++. |. +|+|+.|.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~-G~~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQA-GPSELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT-CCSEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHHc-CCCEEEEEeCC
Confidence 35799999999999999999999 85 89999876
No 430
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=82.09 E-value=1.5 Score=36.90 Aligned_cols=32 Identities=22% Similarity=0.362 Sum_probs=29.2
Q ss_pred cEEEECC-CHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 92 DVVVVGA-GSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGg-G~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.|+|.|| |..|..++..|.++ |.+|+++.|..
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNR-GHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhC-CCEEEEEEcCc
Confidence 3899996 99999999999999 99999999874
No 431
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=82.07 E-value=1.2 Score=41.10 Aligned_cols=33 Identities=33% Similarity=0.599 Sum_probs=28.7
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCC--eEEEEecc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQS 123 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~--~V~llEk~ 123 (356)
+..|.|||+|..|.++|+.|+.. +. .+.|+|..
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~-~~~~el~L~Di~ 43 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQ-GIAQEIGIVDIF 43 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHcC-CCCCEEEEEeCC
Confidence 46899999999999999999886 55 79999974
No 432
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=81.89 E-value=1.4 Score=39.92 Aligned_cols=32 Identities=28% Similarity=0.395 Sum_probs=29.7
Q ss_pred cEEEEC-CCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 92 DVVVVG-AGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIG-gG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.|.||| .|..|.+.|..|++. |.+|.++++..
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~-G~~V~~~~~~~ 55 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRAS-GYPISILDRED 55 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTT-TCCEEEECTTC
T ss_pred EEEEEcCCCHHHHHHHHHHHhC-CCeEEEEECCc
Confidence 699999 999999999999999 99999999764
No 433
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=81.80 E-value=1.6 Score=38.72 Aligned_cols=32 Identities=22% Similarity=0.457 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.|+|.|+|..|...+..|.++ |.+|+++.+..
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~~ 36 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTAQ-GHEVTGLRRSA 36 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEEECTT
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCc
Confidence 699999999999999999999 99999999874
No 434
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=81.76 E-value=1.3 Score=43.80 Aligned_cols=34 Identities=21% Similarity=0.407 Sum_probs=31.8
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~ 125 (356)
-.++|+|+|..|...|..|.+. |.+|+++|+++.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~-g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK-PVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHC-CCCEEEEECChH
Confidence 5799999999999999999999 999999999864
No 435
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=81.73 E-value=1.2 Score=40.23 Aligned_cols=34 Identities=24% Similarity=0.318 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~ 124 (356)
...++|+|+|.+|.++++.|.+. |. +|+|+.|..
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~-G~~~v~v~nRt~ 156 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDN-FAKDIYVVTRNP 156 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHT-TCSEEEEEESCH
T ss_pred CCEEEEECCcHHHHHHHHHHHHc-CCCEEEEEeCCH
Confidence 45799999999999999999999 87 899998763
No 436
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=81.69 E-value=1.3 Score=39.80 Aligned_cols=33 Identities=18% Similarity=0.221 Sum_probs=28.8
Q ss_pred ccEEEECCC---HHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAG---SAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG---~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.-++|.||+ ..|..+|..|+++ |.+|+++.+..
T Consensus 31 k~vlVTGasg~~GIG~~ia~~la~~-G~~V~~~~r~~ 66 (296)
T 3k31_A 31 KKGVIIGVANDKSLAWGIAKAVCAQ-GAEVALTYLSE 66 (296)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSG
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHC-CCEEEEEeCCh
Confidence 458999985 7899999999999 99999998863
No 437
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=81.68 E-value=0.89 Score=40.77 Aligned_cols=32 Identities=16% Similarity=0.252 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.|.|||.|..|...|..|++. |++|+++++..
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRA-GFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-TCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHC-CCeEEEEcCCH
Confidence 589999999999999999999 99999999875
No 438
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=81.64 E-value=1.4 Score=41.17 Aligned_cols=33 Identities=18% Similarity=0.342 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|.|||.|..|...|..|++. |++|+++++..
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~-G~~V~v~dr~~ 55 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKG-GHECVVYDLNV 55 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CEEEEECchHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 4799999999999999999999 99999999864
No 439
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=81.50 E-value=1.2 Score=40.20 Aligned_cols=32 Identities=19% Similarity=0.343 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.|.|||.|..|...|..|++. |++|+++++..
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~-G~~V~~~d~~~ 36 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKA-GYLLNVFDLVQ 36 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEEeecHHHHHHHHHHHhC-CCeEEEEcCCH
Confidence 699999999999999999999 99999999864
No 440
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=81.49 E-value=1.1 Score=40.82 Aligned_cols=33 Identities=27% Similarity=0.681 Sum_probs=29.2
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCC--eEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~llEk~~ 124 (356)
..|.|||+|..|...|+.++.. +. ++.|+|...
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-GIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCCCEEEEEcCCc
Confidence 4799999999999999999988 78 999999875
No 441
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=81.37 E-value=1.5 Score=42.99 Aligned_cols=34 Identities=9% Similarity=0.234 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
...|.|||.|..|...|..|+++ |++|++.++..
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADH-GFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 46899999999999999999999 99999999864
No 442
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=81.30 E-value=1.7 Score=41.52 Aligned_cols=34 Identities=15% Similarity=0.298 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
...|+|+|+|..|...+..+.+. |++|++++...
T Consensus 35 ~~~IlIlG~G~lg~~~~~aa~~l-G~~v~v~d~~~ 68 (419)
T 4e4t_A 35 GAWLGMVGGGQLGRMFCFAAQSM-GYRVAVLDPDP 68 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEECCCC
Confidence 35799999999999999999999 99999998653
No 443
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=81.17 E-value=1.6 Score=36.90 Aligned_cols=32 Identities=22% Similarity=0.384 Sum_probs=29.3
Q ss_pred cEEEECC-CHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 92 DVVVVGA-GSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGg-G~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.|+|.|| |..|...+..|.++ |.+|+++.|..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRR-GHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHC-CCEEEEEEecc
Confidence 3899998 99999999999999 99999999864
No 444
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=81.11 E-value=1.2 Score=39.84 Aligned_cols=33 Identities=24% Similarity=0.482 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..++|||+|..|...|..|.+. |.+|+++++..
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~-g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKE-GAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHc-CCEEEEEECCH
Confidence 5799999999999999999998 88999998763
No 445
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=81.08 E-value=1.5 Score=39.02 Aligned_cols=32 Identities=28% Similarity=0.362 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCC--eEEEEeccC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~--~V~llEk~~ 124 (356)
.|.|||+|..|...|..|++. |. +|+++++..
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~-g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhc-CCCcEEEEEeCCH
Confidence 589999999999999999998 88 899998763
No 446
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=81.06 E-value=1.9 Score=35.79 Aligned_cols=32 Identities=16% Similarity=0.442 Sum_probs=29.6
Q ss_pred cEEEECC-CHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 92 DVVVVGA-GSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGg-G~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.|+|.|| |..|..++..|.++ |.+|+++.+..
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~~-g~~V~~~~r~~ 37 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQA-GYEVTVLVRDS 37 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCG
T ss_pred EEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCh
Confidence 5999999 99999999999999 99999999874
No 447
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=81.03 E-value=0.83 Score=42.20 Aligned_cols=34 Identities=21% Similarity=0.261 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCC-------CeEEEEeccCC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPN-------IQIAIIEQSVS 125 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G-------~~V~llEk~~~ 125 (356)
..|.|||+|..|...|..|++. | .+|.++++...
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~-g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGN-AAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-HHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCcccCCCCeEEEEEcChh
Confidence 3699999999999999999998 8 89999998753
No 448
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=80.86 E-value=1.3 Score=38.84 Aligned_cols=34 Identities=18% Similarity=0.198 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCC----CeEEEEeccCC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPN----IQIAIIEQSVS 125 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G----~~V~llEk~~~ 125 (356)
..|.|||+|..|...|..|++. | .+|.++++...
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~-g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA-NIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH-TSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCCCCCeEEEEeCCcc
Confidence 3699999999999999999988 8 69999998754
No 449
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=80.76 E-value=1.6 Score=38.49 Aligned_cols=33 Identities=12% Similarity=0.123 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|+|.|+|..|...+..|.++ |++|+++.|..
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQ-GWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGG-TCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHC-CCEEEEEEcCh
Confidence 3699999999999999999999 99999999864
No 450
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=80.65 E-value=1.4 Score=41.97 Aligned_cols=52 Identities=8% Similarity=0.017 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHcCCCcEEEcCeEEEEEEEeCCe-EEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 170 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGR-VGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 170 ~~~~~~l~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
..+.+.|.+. .|++++++++|++|..++++ +. |.++ ..+++||.||+|++..
T Consensus 215 ~~l~~~l~~~----lg~~i~~~~~V~~i~~~~~~~v~-v~~~---------------~~~~~ad~VI~a~p~~ 267 (453)
T 2yg5_A 215 QQVSIRMAEA----LGDDVFLNAPVRTVKWNESGATV-LADG---------------DIRVEASRVILAVPPN 267 (453)
T ss_dssp HHHHHHHHHH----HGGGEECSCCEEEEEEETTEEEE-EETT---------------TEEEEEEEEEECSCGG
T ss_pred HHHHHHHHHh----cCCcEEcCCceEEEEEeCCceEE-EEEC---------------CeEEEcCEEEEcCCHH
Confidence 3444555443 36899999999999988876 43 3321 3679999999999943
No 451
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=80.64 E-value=1.3 Score=38.92 Aligned_cols=32 Identities=25% Similarity=0.359 Sum_probs=29.0
Q ss_pred cEEEECCCHHHHHHHHHhhcCCC-CeEEEEeccC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPN-IQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G-~~V~llEk~~ 124 (356)
.|.|||+|..|...|..|++. | .+|.++++..
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQ-GGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-CSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHC-CCCeEEEECCCH
Confidence 489999999999999999998 8 9999998863
No 452
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=80.55 E-value=1.5 Score=42.89 Aligned_cols=34 Identities=21% Similarity=0.466 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.-.|+|||.|..|..+|..|... |.+|+++|+..
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~-Ga~Viv~d~~~ 307 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQ-GARVSVTEIDP 307 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred cCEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 35799999999999999999888 99999999763
No 453
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=80.40 E-value=1.4 Score=42.19 Aligned_cols=34 Identities=26% Similarity=0.387 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.-.|+|||.|..|..+|..|... |.+|++.|+.+
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~-Ga~Viv~D~dp 253 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAM-GSIVYVTEIDP 253 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCCh
Confidence 45799999999999999999888 99999999763
No 454
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=80.39 E-value=1.5 Score=38.33 Aligned_cols=33 Identities=21% Similarity=0.171 Sum_probs=27.4
Q ss_pred ccEEEECC-CHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGA-GSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGg-G~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.-++|.|| |..|..+|..|+++ |.+|+++++..
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~-G~~V~~~~r~~ 43 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAER-GAKVIGTATSE 43 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 34777776 56799999999999 99999998763
No 455
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=80.26 E-value=1.4 Score=40.50 Aligned_cols=32 Identities=22% Similarity=0.529 Sum_probs=28.6
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCC--eEEEEeccC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~--~V~llEk~~ 124 (356)
.|.|||+|..|..+|+.|++. +. ++.++|...
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-DVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCch
Confidence 489999999999999999987 66 899999764
No 456
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=80.15 E-value=1.4 Score=39.51 Aligned_cols=33 Identities=18% Similarity=0.292 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|.|||+|..|...|..|.+. |.+|.++++..
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA-GYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 3699999999999999999999 99999999864
No 457
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=80.03 E-value=1.5 Score=45.11 Aligned_cols=32 Identities=25% Similarity=0.349 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.|.|||+|..|...|..|++. |++|+++|+..
T Consensus 314 kV~VIGaG~MG~~iA~~la~a-G~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILS-NYPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTT-TCCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHhC-CCEEEEEECCH
Confidence 599999999999999999999 99999999874
No 458
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=79.86 E-value=1.6 Score=42.05 Aligned_cols=31 Identities=23% Similarity=0.553 Sum_probs=28.7
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCC---eEEEEe
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNI---QIAIIE 121 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~---~V~llE 121 (356)
+..|+|+|+|.+|.++|..|.+. |. +|.|++
T Consensus 186 ~~rvlvlGAGgAg~aia~~L~~~-G~~~~~I~vvd 219 (439)
T 2dvm_A 186 EITLALFGAGAAGFATLRILTEA-GVKPENVRVVE 219 (439)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHT-TCCGGGEEEEE
T ss_pred CCEEEEECccHHHHHHHHHHHHc-CCCcCeEEEEE
Confidence 46799999999999999999999 87 899999
No 459
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=79.84 E-value=1.5 Score=39.31 Aligned_cols=32 Identities=25% Similarity=0.288 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.|.|||.|..|...|..|++. |.+|.++++..
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKH-GYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHT-TCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 489999999999999999999 99999999864
No 460
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=79.83 E-value=1.7 Score=43.32 Aligned_cols=34 Identities=24% Similarity=0.473 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~ 124 (356)
...|+|||+|..|..+|..|++. |. +++|+|...
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~a-GVG~ItLvD~D~ 361 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGT 361 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCCEEEEECCSB
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCc
Confidence 46899999999999999999998 76 789998764
No 461
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=79.82 E-value=1.9 Score=39.77 Aligned_cols=32 Identities=25% Similarity=0.694 Sum_probs=28.9
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCC--eEEEEecc
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQS 123 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~llEk~ 123 (356)
..|.|||+|..|...|+.|+.. +. ++.|+|..
T Consensus 20 ~kV~ViGaG~vG~~~a~~l~~~-~~~~el~L~Di~ 53 (331)
T 4aj2_A 20 NKITVVGVGAVGMACAISILMK-DLADELALVDVI 53 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCceEEEEeCC
Confidence 5799999999999999999988 77 89999964
No 462
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=79.79 E-value=1.3 Score=38.99 Aligned_cols=34 Identities=21% Similarity=0.309 Sum_probs=28.6
Q ss_pred ccEEEECC-CHHHHHHHHHhhcCCCCeEEEEeccCC
Q 018414 91 TDVVVVGA-GSAGLSCAYELSKNPNIQIAIIEQSVS 125 (356)
Q Consensus 91 ~DVvIIGg-G~aGl~aA~~La~~~G~~V~llEk~~~ 125 (356)
.-++|.|| |..|..+|..|+++ |.+|+++.+...
T Consensus 29 k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~ 63 (260)
T 3un1_A 29 KVVVITGASQGIGAGLVRAYRDR-NYRVVATSRSIK 63 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChh
Confidence 35777776 67799999999999 999999998754
No 463
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=79.79 E-value=1.8 Score=38.33 Aligned_cols=31 Identities=26% Similarity=0.561 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCCeEEEEecc
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~ 123 (356)
.++|||+|..|...|..|.+. |.+|+++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~-g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREA-GLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHC-CCEEEEEECC
Confidence 799999999999999999998 8899999876
No 464
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=79.75 E-value=1.7 Score=42.23 Aligned_cols=33 Identities=12% Similarity=0.390 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.+|.|||.|..|...|..|+++ |++|.++++..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-GFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-TCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 3699999999999999999999 99999999863
No 465
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=79.41 E-value=1.4 Score=42.24 Aligned_cols=33 Identities=21% Similarity=0.419 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
...-|||.|..|+..|..|++. |++|+++|+..
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~-G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKH-GVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 5789999999999999999999 99999999864
No 466
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=79.41 E-value=2.2 Score=37.75 Aligned_cols=32 Identities=16% Similarity=0.109 Sum_probs=28.6
Q ss_pred cEEEECC---CHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 92 DVVVVGA---GSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGg---G~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
-++|.|| |..|..+|..|+++ |.+|+++.+..
T Consensus 8 ~vlVTGas~~~gIG~~~a~~l~~~-G~~V~~~~r~~ 42 (275)
T 2pd4_A 8 KGLIVGVANNKSIAYGIAQSCFNQ-GATLAFTYLNE 42 (275)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHTT-TCEEEEEESST
T ss_pred EEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4899997 58899999999999 99999999874
No 467
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=79.31 E-value=1.5 Score=40.62 Aligned_cols=32 Identities=19% Similarity=0.475 Sum_probs=28.9
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCC--eEEEEecc
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQS 123 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~llEk~ 123 (356)
..|.|||+|..|..+|+.|+.. |+ ++.++|..
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~-g~~~ev~L~Di~ 55 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMK-DLADEVALVDVM 55 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHH-CCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCeEEEEECC
Confidence 5799999999999999999988 77 89999974
No 468
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=79.20 E-value=2 Score=39.47 Aligned_cols=34 Identities=15% Similarity=0.111 Sum_probs=28.4
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
-.|+|+|+|+.|+.++..|++..|.+|+.++..+
T Consensus 165 ~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~ 198 (348)
T 4eez_A 165 DWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQ 198 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCH
T ss_pred CEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcH
Confidence 4699999999999999888765488999998653
No 469
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=79.11 E-value=1.5 Score=40.74 Aligned_cols=35 Identities=17% Similarity=0.321 Sum_probs=30.8
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccC
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~ 124 (356)
....|+|||+|..|..+|..|++. |. +++|+|...
T Consensus 35 ~~~~VlivG~GGlG~~ia~~La~~-Gvg~itlvD~d~ 70 (346)
T 1y8q_A 35 RASRVLLVGLKGLGAEIAKNLILA-GVKGLTMLDHEQ 70 (346)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-CCCEEEEEECCC
Confidence 357899999999999999999998 77 799998764
No 470
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=79.10 E-value=2.3 Score=37.20 Aligned_cols=33 Identities=27% Similarity=0.397 Sum_probs=28.0
Q ss_pred ccEEEECC-CHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGA-GSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGg-G~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.-++|.|| |..|..+|..|+++ |.+|+++++..
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~ 46 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKA-GATVAIADLDV 46 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 35888887 67799999999999 99999998763
No 471
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=79.03 E-value=1.8 Score=40.76 Aligned_cols=43 Identities=16% Similarity=0.068 Sum_probs=32.3
Q ss_pred CCCcEEEcCeEEEEEEEeCCeEEEEEEcceeeecccCCCCCCCCeEEEcCEEEEcCCCC
Q 018414 183 RPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD 241 (356)
Q Consensus 183 ~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~~~~~g~~~~i~Ak~VI~AtGg~ 241 (356)
..+.+++++++|++|..+++++. |.+.+ .+++||.||+|++..
T Consensus 215 ~l~~~v~~~~~V~~i~~~~~~v~-v~~~~---------------g~~~ad~Vv~a~~~~ 257 (424)
T 2b9w_A 215 TLEHPAERNVDITRITREDGKVH-IHTTD---------------WDRESDVLVLTVPLE 257 (424)
T ss_dssp HSSSCCBCSCCEEEEECCTTCEE-EEESS---------------CEEEESEEEECSCHH
T ss_pred hhcceEEcCCEEEEEEEECCEEE-EEECC---------------CeEEcCEEEECCCHH
Confidence 33457889999999998877765 55431 348999999999953
No 472
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=79.03 E-value=2.1 Score=37.91 Aligned_cols=33 Identities=18% Similarity=0.397 Sum_probs=28.0
Q ss_pred ccEEEECC-CHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGA-GSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGg-G~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.-++|.|| |..|..+|..|+++ |.+|+++++..
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~-G~~Vi~~~r~~ 64 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHAD-GLGVVIADLAA 64 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCh
Confidence 34788887 56799999999999 99999998863
No 473
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=78.99 E-value=1.9 Score=40.43 Aligned_cols=34 Identities=15% Similarity=0.275 Sum_probs=30.2
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEecc
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~ 123 (356)
....|+|+|.|-.|..+|..|.+. |.+|++.|+.
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~-GakVvv~D~~ 205 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTE-GAKLVVTDVN 205 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred CcCEEEEECchHHHHHHHHHHHHC-CCEEEEEcCC
Confidence 345799999999999999999999 9999998854
No 474
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=78.95 E-value=1.7 Score=38.98 Aligned_cols=33 Identities=18% Similarity=0.308 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|.|||+|..|...|..|.+. |++|.++++..
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE-GVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT-TCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 4699999999999999999999 99999999864
No 475
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=78.91 E-value=1.6 Score=40.71 Aligned_cols=34 Identities=26% Similarity=0.526 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~ 124 (356)
...|+|||+|..|..+|..|++. |. +++|+|...
T Consensus 118 ~~~VlvvG~GglGs~va~~La~a-Gvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATS-GIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CCCeEEEECCCc
Confidence 46899999999999999999998 75 789999764
No 476
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=78.85 E-value=2 Score=39.86 Aligned_cols=32 Identities=19% Similarity=0.339 Sum_probs=28.1
Q ss_pred ccEEEECC-CHHHHHHHHHhhcCCCC--eEEEEecc
Q 018414 91 TDVVVVGA-GSAGLSCAYELSKNPNI--QIAIIEQS 123 (356)
Q Consensus 91 ~DVvIIGg-G~aGl~aA~~La~~~G~--~V~llEk~ 123 (356)
..|+|||+ |..|..+|+.++.. |. +++++|..
T Consensus 9 ~KV~ViGaaG~VG~~~a~~l~~~-g~~~evvLiDi~ 43 (343)
T 3fi9_A 9 EKLTIVGAAGMIGSNMAQTAAMM-RLTPNLCLYDPF 43 (343)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHT-TCCSCEEEECSC
T ss_pred CEEEEECCCChHHHHHHHHHHhc-CCCCEEEEEeCC
Confidence 47999998 99999999999987 74 89999974
No 477
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=78.83 E-value=2.2 Score=36.78 Aligned_cols=32 Identities=13% Similarity=0.219 Sum_probs=28.9
Q ss_pred cEEEECC-CHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 92 DVVVVGA-GSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGg-G~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
-|+|.|| |..|..++..|+++ |.+|+++.+..
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~-g~~V~~~~r~~ 35 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARA-GHTVIGIDRGQ 35 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred EEEEeCCCcHHHHHHHHHHHhC-CCEEEEEeCCh
Confidence 3899988 89999999999999 99999999874
No 478
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=78.80 E-value=1.5 Score=41.64 Aligned_cols=33 Identities=30% Similarity=0.542 Sum_probs=29.5
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCC-eEEEEecc
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQS 123 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~ 123 (356)
...|+|||+|..|..+|..|... |. +|+++++.
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~-G~~~V~v~~r~ 200 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDR-GVRAVLVANRT 200 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHH-CCSEEEEECSS
T ss_pred CCEEEEEChHHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence 35799999999999999999888 88 89999876
No 479
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=78.75 E-value=1.7 Score=39.88 Aligned_cols=34 Identities=12% Similarity=0.191 Sum_probs=30.1
Q ss_pred CcccEEEECCC-HHHHHHHHHhhcCCCCeEEEEecc
Q 018414 89 ADTDVVVVGAG-SAGLSCAYELSKNPNIQIAIIEQS 123 (356)
Q Consensus 89 ~~~DVvIIGgG-~aGl~aA~~La~~~G~~V~llEk~ 123 (356)
....++|||+| ..|..+|..|... |.+|+++++.
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~-gAtVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLAND-GATVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTT-SCEEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHHC-CCEEEEEeCc
Confidence 34689999999 5799999999999 9999999876
No 480
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=78.72 E-value=2.1 Score=38.28 Aligned_cols=33 Identities=18% Similarity=0.409 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCC---eEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNI---QIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~---~V~llEk~~ 124 (356)
..|.|||+|..|.+.|..|.+. |+ +|.+.++..
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~-g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIAN-GYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHT-TCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHC-CCCCCeEEEEeCCH
Confidence 4699999999999999999998 88 899999864
No 481
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=78.70 E-value=2.2 Score=38.09 Aligned_cols=33 Identities=15% Similarity=0.353 Sum_probs=28.0
Q ss_pred ccEEEECC-CHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGA-GSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGg-G~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.-++|.|| |..|..+|..|+++ |.+|+++++..
T Consensus 29 k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~ 62 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAAD-GVTVGALGRTR 62 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESSH
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 45788886 67799999999999 99999998863
No 482
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=78.67 E-value=2.1 Score=41.79 Aligned_cols=33 Identities=12% Similarity=0.390 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.+|.|||.|..|...|..|+++ |++|++.++..
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~-G~~V~v~dr~~ 37 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH-GFVVCAFNRTV 37 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-TCCEEEECSST
T ss_pred CEEEEEChhHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4799999999999999999999 99999999875
No 483
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=78.65 E-value=1.1 Score=40.53 Aligned_cols=32 Identities=19% Similarity=0.331 Sum_probs=27.8
Q ss_pred ccEEEECCCHHHHHHHHHhhcCC----C-CeEEEEec
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNP----N-IQIAIIEQ 122 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~----G-~~V~llEk 122 (356)
..|.|||+|..|...|..|++.+ | .+|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 46999999999999999998752 5 79999987
No 484
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=78.50 E-value=1.7 Score=38.99 Aligned_cols=32 Identities=16% Similarity=0.368 Sum_probs=29.0
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCC-eEEEEecc
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQS 123 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~ 123 (356)
..++|||+|.+|.++++.|.+. |. +|+|+.|.
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~-G~~~i~v~nRt 152 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNS-GFEKLKIYARN 152 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHT-TCCCEEEECSC
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence 5799999999999999999999 86 79999876
No 485
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=78.46 E-value=1.6 Score=38.86 Aligned_cols=32 Identities=22% Similarity=0.332 Sum_probs=26.5
Q ss_pred cEEEECC-CHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 92 DVVVVGA-GSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGg-G~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
-++|.|| |..|..+|..|+++ |.+|+++++..
T Consensus 30 ~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~ 62 (272)
T 4dyv_A 30 IAIVTGAGSGVGRAVAVALAGA-GYGVALAGRRL 62 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred EEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 3566676 67799999999999 99999998863
No 486
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=78.28 E-value=1.9 Score=41.98 Aligned_cols=32 Identities=28% Similarity=0.534 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 92 DVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
+|.|||.|..|...|..|+++ |++|.++++..
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-GFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 699999999999999999999 99999999853
No 487
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=78.28 E-value=1.7 Score=41.16 Aligned_cols=31 Identities=26% Similarity=0.423 Sum_probs=29.0
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEe
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIE 121 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llE 121 (356)
...|+|+|+|..|...+..+.+. |++|++++
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~l-G~~v~~~d 54 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRL-NIQVNVLD 54 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEE
Confidence 35799999999999999999999 99999999
No 488
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=78.20 E-value=2.2 Score=39.29 Aligned_cols=34 Identities=18% Similarity=0.208 Sum_probs=28.4
Q ss_pred cccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 90 DTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 90 ~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.-.|+|+|+|..|+.++..+... |.+|+.+++.+
T Consensus 177 g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~ 210 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNE 210 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 34699999999999987777668 99999998764
No 489
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=78.18 E-value=0.67 Score=40.65 Aligned_cols=32 Identities=16% Similarity=0.232 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEecc
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~ 123 (356)
..|.|||.|..|.+.|..|.++ |++|+++++.
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~-G~~V~~~~~~ 38 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSV-GHYVTVLHAP 38 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHT-TCEEEECSSG
T ss_pred cEEEEEeeCHHHHHHHHHHHHC-CCEEEEecCH
Confidence 4799999999999999999999 9999999874
No 490
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=78.16 E-value=1.6 Score=43.00 Aligned_cols=34 Identities=21% Similarity=0.475 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccCC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVS 125 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~~ 125 (356)
-.|+|||+|..|+-.|..|++. +.+|+++++.+.
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~-~~~vtv~~r~~~ 220 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQ-AAELFVFQRTPH 220 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-BSEEEEEESSCC
T ss_pred CEEEEECCCccHHHHHHHHhhc-CceEEEEEcCCc
Confidence 4799999999999999999998 999999998753
No 491
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=78.06 E-value=2.2 Score=41.43 Aligned_cols=33 Identities=21% Similarity=0.336 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
.+|.|||.|..|...|..|+++ |++|.++++..
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~-G~~V~v~dr~~ 38 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESR-GYTVAIYNRTT 38 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred CcEEEEeeHHHHHHHHHHHHhC-CCEEEEEcCCH
Confidence 5799999999999999999999 99999999853
No 492
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=77.99 E-value=1.9 Score=39.40 Aligned_cols=33 Identities=18% Similarity=0.251 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCC----CeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPN----IQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G----~~V~llEk~~ 124 (356)
..|.|||+|..|...|..|.+. | .+|+++++..
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~-G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAA-GVLAAHKIMASSPDM 59 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHT-TSSCGGGEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCCCcceEEEECCCc
Confidence 3699999999999999999998 8 7999998864
No 493
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=77.91 E-value=2.4 Score=35.91 Aligned_cols=32 Identities=16% Similarity=0.336 Sum_probs=28.6
Q ss_pred cEEEECC-CHHHHHHHHHhh-cCCCCeEEEEeccC
Q 018414 92 DVVVVGA-GSAGLSCAYELS-KNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGg-G~aGl~aA~~La-~~~G~~V~llEk~~ 124 (356)
-|+|.|| |..|..++..|+ +. |++|+++.|..
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~-g~~V~~~~r~~ 40 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYT-DMHITLYGRQL 40 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHC-CCEEEEEESSH
T ss_pred EEEEEeCCcHHHHHHHHHHHhcC-CceEEEEecCc
Confidence 3999995 999999999999 78 99999999874
No 494
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=77.75 E-value=2.2 Score=39.66 Aligned_cols=33 Identities=24% Similarity=0.496 Sum_probs=27.4
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCCeEEEEecc
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQS 123 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~ 123 (356)
.+..|+|+|+|..|-.+|..|++. .+|.+.++.
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~--~~v~~~~~~ 47 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVN 47 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESC
T ss_pred CccEEEEECCCHHHHHHHHHHhcC--CCeEEEEcC
Confidence 346799999999999999999764 689888764
No 495
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=77.72 E-value=2.1 Score=37.51 Aligned_cols=32 Identities=16% Similarity=0.311 Sum_probs=26.9
Q ss_pred cEEEECC-CHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 92 DVVVVGA-GSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 92 DVvIIGg-G~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
-++|.|| |..|..+|..|+++ |.+|+++.+..
T Consensus 16 ~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~ 48 (260)
T 2zat_A 16 VALVTASTDGIGLAIARRLAQD-GAHVVVSSRKQ 48 (260)
T ss_dssp EEEESSCSSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred EEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4777776 67799999999999 99999998763
No 496
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=77.54 E-value=2.2 Score=39.62 Aligned_cols=33 Identities=24% Similarity=0.226 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|.|||.|..|.+.|..|.+. |.+|.++++..
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~-G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA-NHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4699999999999999999999 99999999864
No 497
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=77.52 E-value=2.1 Score=42.76 Aligned_cols=35 Identities=23% Similarity=0.455 Sum_probs=30.6
Q ss_pred CcccEEEECCCHHHHHHHHHhhcCCCC-eEEEEeccC
Q 018414 89 ADTDVVVVGAGSAGLSCAYELSKNPNI-QIAIIEQSV 124 (356)
Q Consensus 89 ~~~DVvIIGgG~aGl~aA~~La~~~G~-~V~llEk~~ 124 (356)
....|+|||+|..|+.+|..|++. |. +++|+|...
T Consensus 325 ~~arVLIVGaGGLGs~vA~~La~a-GVG~ItLvD~D~ 360 (615)
T 4gsl_A 325 KNTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGT 360 (615)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCC
Confidence 346899999999999999999998 75 788999864
No 498
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=77.47 E-value=2 Score=39.42 Aligned_cols=32 Identities=31% Similarity=0.635 Sum_probs=28.5
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCC--eEEEEecc
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNI--QIAIIEQS 123 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~--~V~llEk~ 123 (356)
..|.|||+|..|.+.|+.|+.. +. .+.|+|..
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-~~~~el~L~Di~ 39 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-GIAEEFVIVDVV 39 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHcC-CCCCEEEEEeCC
Confidence 5799999999999999999987 55 89999974
No 499
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=77.37 E-value=2.6 Score=37.01 Aligned_cols=33 Identities=15% Similarity=0.209 Sum_probs=27.7
Q ss_pred ccEEEECCC---HHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAG---SAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG---~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
--++|-|++ ..|...|..|+++ |.+|++..+..
T Consensus 7 K~alVTGaa~~~GIG~aiA~~la~~-Ga~Vvi~~r~~ 42 (256)
T 4fs3_A 7 KTYVIMGIANKRSIAFGVAKVLDQL-GAKLVFTYRKE 42 (256)
T ss_dssp CEEEEECCCSTTCHHHHHHHHHHHT-TCEEEEEESSG
T ss_pred CEEEEECCCCCchHHHHHHHHHHHC-CCEEEEEECCH
Confidence 347888863 5799999999999 99999999864
No 500
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=77.35 E-value=2.3 Score=39.80 Aligned_cols=33 Identities=18% Similarity=0.375 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHhhcCCCCeEEEEeccC
Q 018414 91 TDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSV 124 (356)
Q Consensus 91 ~DVvIIGgG~aGl~aA~~La~~~G~~V~llEk~~ 124 (356)
..|+|||+|..|..++..+.+. |++|++++...
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~-G~~vi~~d~~~ 47 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEM-GYKIAVLDPTK 47 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESST
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCC
Confidence 4799999999999999999999 99999999764
Done!