Query 018416
Match_columns 356
No_of_seqs 434 out of 3438
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 14:55:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018416.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018416hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4eqs_A Coenzyme A disulfide re 100.0 1.9E-48 6.6E-53 384.0 23.8 301 4-317 115-436 (437)
2 3iwa_A FAD-dependent pyridine 100.0 3.5E-46 1.2E-50 371.0 21.8 317 4-326 124-466 (472)
3 3ntd_A FAD-dependent pyridine 100.0 2.6E-45 9E-50 372.2 24.6 325 4-335 116-482 (565)
4 3ics_A Coenzyme A-disulfide re 100.0 1.1E-44 3.6E-49 369.7 26.3 325 4-337 151-500 (588)
5 3kd9_A Coenzyme A disulfide re 100.0 1.1E-43 3.7E-48 350.9 23.3 305 4-316 113-439 (449)
6 2cdu_A NADPH oxidase; flavoenz 100.0 1.5E-43 5.2E-48 350.2 23.7 310 4-321 116-447 (452)
7 3oc4_A Oxidoreductase, pyridin 100.0 9.5E-44 3.2E-48 351.7 20.8 306 4-318 114-439 (452)
8 2bc0_A NADH oxidase; flavoprot 100.0 5.4E-43 1.8E-47 349.8 25.4 308 4-318 148-489 (490)
9 3lxd_A FAD-dependent pyridine 100.0 2E-41 6.7E-46 331.4 36.0 286 4-297 118-408 (415)
10 3fg2_P Putative rubredoxin red 100.0 3.5E-41 1.2E-45 328.6 34.6 286 4-297 109-397 (404)
11 3ef6_A Toluene 1,2-dioxygenase 100.0 2.2E-41 7.4E-46 330.9 32.0 287 4-300 110-399 (410)
12 2gqw_A Ferredoxin reductase; f 100.0 2.7E-40 9.4E-45 322.9 33.7 277 4-293 112-393 (408)
13 1nhp_A NADH peroxidase; oxidor 100.0 1.4E-41 4.7E-46 335.7 21.2 304 4-314 114-439 (447)
14 3cgb_A Pyridine nucleotide-dis 100.0 8E-41 2.7E-45 333.3 26.1 302 4-314 151-476 (480)
15 1q1r_A Putidaredoxin reductase 100.0 8E-40 2.7E-44 321.8 31.4 283 4-293 113-402 (431)
16 3klj_A NAD(FAD)-dependent dehy 100.0 6.3E-39 2.2E-43 311.0 24.0 256 4-289 115-375 (385)
17 1mo9_A ORF3; nucleotide bindin 100.0 1.3E-37 4.5E-42 313.2 24.8 282 4-306 185-509 (523)
18 2a8x_A Dihydrolipoyl dehydroge 100.0 7.8E-38 2.7E-42 310.2 21.0 275 4-306 145-449 (464)
19 1zmd_A Dihydrolipoyl dehydroge 100.0 1.2E-37 4E-42 309.7 22.4 278 4-306 151-458 (474)
20 1ojt_A Surface protein; redox- 100.0 6.5E-38 2.2E-42 312.4 20.5 273 5-306 160-462 (482)
21 1xdi_A RV3303C-LPDA; reductase 100.0 6.1E-38 2.1E-42 313.8 20.1 276 4-306 155-456 (499)
22 2hqm_A GR, grase, glutathione 100.0 1.7E-37 5.8E-42 309.2 23.0 276 4-306 159-466 (479)
23 2qae_A Lipoamide, dihydrolipoy 100.0 2.5E-37 8.6E-42 306.9 23.4 276 4-306 147-453 (468)
24 2wpf_A Trypanothione reductase 100.0 2.1E-37 7.1E-42 309.8 22.1 275 4-306 166-470 (495)
25 1ebd_A E3BD, dihydrolipoamide 100.0 2.4E-37 8.1E-42 306.0 21.7 275 4-306 144-446 (455)
26 1fec_A Trypanothione reductase 100.0 3E-37 1E-41 308.2 22.3 275 4-306 162-466 (490)
27 1onf_A GR, grase, glutathione 100.0 5.6E-37 1.9E-41 307.0 24.0 284 4-306 152-491 (500)
28 4b1b_A TRXR, thioredoxin reduc 100.0 1.6E-37 5.5E-42 312.7 19.0 250 38-306 222-516 (542)
29 1ges_A Glutathione reductase; 100.0 6.2E-37 2.1E-41 302.8 22.8 275 4-306 142-445 (450)
30 1dxl_A Dihydrolipoamide dehydr 100.0 2.7E-37 9.2E-42 306.7 20.2 276 4-306 150-455 (470)
31 1v59_A Dihydrolipoamide dehydr 100.0 4.9E-37 1.7E-41 305.5 20.4 275 9-306 159-463 (478)
32 3lad_A Dihydrolipoamide dehydr 100.0 8.4E-37 2.9E-41 303.7 21.0 276 4-306 153-456 (476)
33 2v3a_A Rubredoxin reductase; a 100.0 1.4E-35 4.8E-40 287.0 28.5 257 4-274 112-373 (384)
34 3dk9_A Grase, GR, glutathione 100.0 1.7E-36 5.9E-41 301.6 21.7 276 4-306 159-473 (478)
35 2eq6_A Pyruvate dehydrogenase 100.0 2.6E-36 9.1E-41 299.4 22.8 274 4-306 142-446 (464)
36 3urh_A Dihydrolipoyl dehydroge 100.0 3.9E-36 1.3E-40 300.1 23.4 250 38-306 197-476 (491)
37 3l8k_A Dihydrolipoyl dehydroge 100.0 1.1E-36 3.6E-41 302.4 18.9 276 4-306 143-449 (466)
38 2r9z_A Glutathione amide reduc 100.0 3.1E-36 1.1E-40 298.9 22.1 274 4-306 141-443 (463)
39 1xhc_A NADH oxidase /nitrite r 100.0 7.8E-36 2.7E-40 287.5 23.8 240 4-270 112-353 (367)
40 4dna_A Probable glutathione re 100.0 3.6E-36 1.2E-40 298.3 21.3 274 4-306 144-445 (463)
41 1zk7_A HGII, reductase, mercur 100.0 3.5E-35 1.2E-39 291.4 24.0 274 4-306 149-447 (467)
42 3dgh_A TRXR-1, thioredoxin red 100.0 1.3E-35 4.5E-40 295.8 20.0 276 4-306 161-470 (483)
43 3ic9_A Dihydrolipoamide dehydr 100.0 9.1E-36 3.1E-40 297.7 18.6 275 4-306 147-458 (492)
44 2yqu_A 2-oxoglutarate dehydrog 100.0 2.3E-35 8E-40 291.7 20.7 276 4-306 140-440 (455)
45 1m6i_A Programmed cell death p 100.0 4.2E-35 1.4E-39 292.9 22.7 280 4-292 143-484 (493)
46 3o0h_A Glutathione reductase; 100.0 2.4E-35 8.3E-40 293.9 19.9 250 38-306 190-465 (484)
47 3qfa_A Thioredoxin reductase 1 100.0 3.8E-35 1.3E-39 295.0 19.9 277 4-306 184-498 (519)
48 3dgz_A Thioredoxin reductase 2 100.0 4.8E-35 1.6E-39 292.1 19.9 276 4-306 158-470 (488)
49 1lvl_A Dihydrolipoamide dehydr 100.0 2.4E-34 8.3E-39 284.8 19.6 248 38-306 170-443 (458)
50 2x8g_A Thioredoxin glutathione 100.0 3.4E-34 1.1E-38 292.7 21.1 277 4-306 260-577 (598)
51 4g6h_A Rotenone-insensitive NA 100.0 2.5E-28 8.6E-33 244.3 15.9 192 4-207 168-398 (502)
52 4a5l_A Thioredoxin reductase; 99.9 1.5E-25 5.3E-30 209.5 11.2 184 4-206 120-308 (314)
53 2ywl_A Thioredoxin reductase r 99.9 1.7E-24 5.8E-29 187.0 16.3 153 41-208 3-169 (180)
54 4gcm_A TRXR, thioredoxin reduc 99.9 2.1E-24 7.2E-29 202.2 15.8 179 4-206 115-302 (312)
55 2zbw_A Thioredoxin reductase; 99.9 4E-24 1.4E-28 201.8 16.9 183 4-208 123-315 (335)
56 1trb_A Thioredoxin reductase; 99.9 1.8E-24 6E-29 202.8 13.9 183 4-207 115-311 (320)
57 1fl2_A Alkyl hydroperoxide red 99.9 4.7E-24 1.6E-28 199.1 15.5 179 4-207 114-302 (310)
58 2q0l_A TRXR, thioredoxin reduc 99.9 3.3E-24 1.1E-28 200.3 13.6 179 4-207 113-306 (311)
59 3cty_A Thioredoxin reductase; 99.9 5.7E-24 2E-28 199.7 15.2 179 4-207 125-313 (319)
60 2q7v_A Thioredoxin reductase; 99.9 7.1E-24 2.4E-28 199.6 15.8 179 4-208 122-310 (325)
61 3r9u_A Thioredoxin reductase; 99.9 8.2E-24 2.8E-28 197.2 15.5 180 4-207 117-309 (315)
62 3ab1_A Ferredoxin--NADP reduct 99.9 3.4E-24 1.2E-28 204.7 12.4 185 3-208 132-326 (360)
63 1vdc_A NTR, NADPH dependent th 99.9 1.6E-23 5.5E-28 197.5 13.6 189 4-207 123-320 (333)
64 3lzw_A Ferredoxin--NADP reduct 99.9 1.7E-23 6E-28 196.5 13.1 181 3-208 124-313 (332)
65 3itj_A Thioredoxin reductase 1 99.9 2.4E-23 8.4E-28 195.9 13.1 181 4-207 141-332 (338)
66 3f8d_A Thioredoxin reductase ( 99.9 7.2E-23 2.5E-27 191.3 14.9 181 4-207 124-314 (323)
67 2vdc_G Glutamate synthase [NAD 99.9 1.1E-22 3.7E-27 201.1 14.3 186 4-207 219-441 (456)
68 3fbs_A Oxidoreductase; structu 99.9 5.4E-23 1.9E-27 190.1 10.1 171 4-207 111-289 (297)
69 3h8l_A NADH oxidase; membrane 99.9 2.1E-22 7.3E-27 195.9 14.8 187 4-208 112-334 (409)
70 1hyu_A AHPF, alkyl hydroperoxi 99.9 2E-22 6.9E-27 202.4 14.4 179 4-207 325-513 (521)
71 3sx6_A Sulfide-quinone reducta 99.9 1.5E-21 5E-26 191.9 19.7 203 4-209 111-343 (437)
72 2a87_A TRXR, TR, thioredoxin r 99.9 9.6E-23 3.3E-27 192.8 10.4 179 4-207 125-313 (335)
73 1cjc_A Protein (adrenodoxin re 99.9 1.2E-22 4.1E-27 201.0 10.8 192 5-208 107-393 (460)
74 4fk1_A Putative thioredoxin re 99.9 2E-22 6.9E-27 188.3 9.5 175 4-206 116-296 (304)
75 1gte_A Dihydropyrimidine dehyd 99.9 2.2E-21 7.5E-26 208.9 18.0 180 38-234 331-540 (1025)
76 3d1c_A Flavin-containing putat 99.9 7.5E-22 2.6E-26 188.5 12.7 164 38-209 165-338 (369)
77 3vrd_B FCCB subunit, flavocyto 99.9 5.6E-22 1.9E-26 192.2 11.7 195 4-207 107-321 (401)
78 1o94_A Tmadh, trimethylamine d 99.9 5.1E-22 1.7E-26 207.0 9.3 198 5-234 499-720 (729)
79 2gag_A Heterotetrameric sarcos 99.9 1.3E-21 4.4E-26 209.4 12.6 176 4-207 252-441 (965)
80 3hyw_A Sulfide-quinone reducta 99.9 1.1E-22 3.9E-27 199.5 3.5 197 8-209 111-332 (430)
81 1lqt_A FPRA; NADP+ derivative, 99.8 2.2E-21 7.5E-26 191.7 10.2 189 5-208 109-385 (456)
82 4a9w_A Monooxygenase; baeyer-v 99.8 3.9E-21 1.3E-25 181.8 8.6 182 4-209 133-351 (357)
83 3h28_A Sulfide-quinone reducta 99.8 1.2E-19 4E-24 177.8 13.1 185 18-209 120-332 (430)
84 3k30_A Histamine dehydrogenase 99.8 8.9E-20 3E-24 189.0 12.8 174 5-209 496-674 (690)
85 2xve_A Flavin-containing monoo 99.8 3.7E-19 1.3E-23 176.2 12.0 166 4-209 167-340 (464)
86 1y56_A Hypothetical protein PH 99.8 1.9E-18 6.5E-23 172.3 13.8 153 4-208 218-375 (493)
87 1ps9_A 2,4-dienoyl-COA reducta 99.8 9.7E-19 3.3E-23 180.7 11.9 167 4-205 466-671 (671)
88 2cul_A Glucose-inhibited divis 99.7 1.8E-17 6.1E-22 149.1 14.0 154 40-207 4-229 (232)
89 3s5w_A L-ornithine 5-monooxyge 99.7 8.2E-18 2.8E-22 165.9 12.0 160 38-205 226-444 (463)
90 2gv8_A Monooxygenase; FMO, FAD 99.7 1.1E-17 3.7E-22 164.7 8.6 166 4-209 178-361 (447)
91 3gwf_A Cyclohexanone monooxyge 99.5 1E-14 3.4E-19 146.9 8.3 179 4-206 148-453 (540)
92 1rp0_A ARA6, thiazole biosynth 99.5 8.9E-14 3E-18 128.6 11.4 165 40-208 40-273 (284)
93 1w4x_A Phenylacetone monooxyge 99.3 6E-13 2E-17 134.0 6.4 181 4-207 155-463 (542)
94 3uox_A Otemo; baeyer-villiger 99.3 6.3E-13 2.2E-17 133.9 6.2 187 4-206 148-462 (545)
95 4ap3_A Steroid monooxygenase; 99.3 2.5E-12 8.5E-17 129.7 8.9 64 4-74 160-226 (549)
96 2bry_A NEDD9 interacting prote 99.1 3.1E-11 1E-15 120.3 5.7 138 5-142 49-233 (497)
97 4a9w_A Monooxygenase; baeyer-v 99.0 2.1E-09 7.3E-14 100.8 13.2 96 40-137 4-130 (357)
98 3nlc_A Uncharacterized protein 99.0 1.5E-09 5.2E-14 109.0 11.1 101 40-141 108-279 (549)
99 3k7m_X 6-hydroxy-L-nicotine ox 99.0 2.7E-09 9.4E-14 103.5 12.0 81 92-175 215-306 (431)
100 3lzw_A Ferredoxin--NADP reduct 98.9 2.7E-09 9.2E-14 99.3 9.4 100 40-141 8-128 (332)
101 3itj_A Thioredoxin reductase 1 98.9 3.9E-09 1.3E-13 98.5 10.5 102 38-142 21-145 (338)
102 3f8d_A Thioredoxin reductase ( 98.9 6.7E-09 2.3E-13 96.1 11.9 100 40-142 16-128 (323)
103 2zbw_A Thioredoxin reductase; 98.9 1.2E-08 4.1E-13 95.4 12.2 98 39-138 5-120 (335)
104 3ab1_A Ferredoxin--NADP reduct 98.9 1.6E-08 5.3E-13 95.8 13.0 99 39-138 14-130 (360)
105 3fbs_A Oxidoreductase; structu 98.9 9.7E-09 3.3E-13 94.0 11.0 99 40-141 3-114 (297)
106 3alj_A 2-methyl-3-hydroxypyrid 98.9 2.1E-08 7.2E-13 95.8 13.4 98 39-141 11-162 (379)
107 3v76_A Flavoprotein; structura 98.9 9.5E-09 3.2E-13 100.0 11.0 99 39-140 27-188 (417)
108 3gwf_A Cyclohexanone monooxyge 98.8 2.2E-08 7.7E-13 100.6 13.2 102 40-141 9-151 (540)
109 3klj_A NAD(FAD)-dependent dehy 98.8 3.9E-09 1.3E-13 101.6 7.1 100 39-142 9-119 (385)
110 3sx6_A Sulfide-quinone reducta 98.8 3.9E-09 1.3E-13 103.1 7.2 99 40-143 5-116 (437)
111 4ap3_A Steroid monooxygenase; 98.8 1.9E-08 6.6E-13 101.2 12.4 103 39-141 21-163 (549)
112 2q0l_A TRXR, thioredoxin reduc 98.8 2.2E-08 7.5E-13 92.6 11.8 98 41-141 3-116 (311)
113 3oz2_A Digeranylgeranylglycero 98.8 7E-08 2.4E-12 91.6 15.5 98 41-139 6-162 (397)
114 1fl2_A Alkyl hydroperoxide red 98.8 1.7E-08 5.9E-13 93.3 10.9 101 41-141 3-117 (310)
115 3d1c_A Flavin-containing putat 98.8 5.8E-08 2E-12 91.9 14.0 98 40-140 5-144 (369)
116 4b63_A L-ornithine N5 monooxyg 98.8 1.1E-07 3.8E-12 94.6 16.5 195 5-208 214-485 (501)
117 4fk1_A Putative thioredoxin re 98.8 3.3E-08 1.1E-12 91.5 11.9 100 41-141 8-119 (304)
118 2gqf_A Hypothetical protein HI 98.8 4E-08 1.4E-12 95.0 12.4 100 40-141 5-170 (401)
119 2q7v_A Thioredoxin reductase; 98.8 3.5E-08 1.2E-12 92.0 11.6 101 40-141 9-125 (325)
120 1vdc_A NTR, NADPH dependent th 98.8 2.2E-08 7.4E-13 93.6 10.1 98 40-141 9-126 (333)
121 3fpz_A Thiazole biosynthetic e 98.8 1.2E-09 4E-14 102.6 1.3 41 34-74 60-102 (326)
122 2i0z_A NAD(FAD)-utilizing dehy 98.8 5E-08 1.7E-12 95.6 13.0 100 40-140 27-192 (447)
123 3vrd_B FCCB subunit, flavocyto 98.8 5.8E-09 2E-13 100.5 6.1 100 39-143 2-112 (401)
124 3hyw_A Sulfide-quinone reducta 98.8 2.4E-09 8.2E-14 104.5 3.5 96 40-140 3-110 (430)
125 1qo8_A Flavocytochrome C3 fuma 98.8 2.7E-08 9.1E-13 100.5 11.2 134 8-141 88-314 (566)
126 2xve_A Flavin-containing monoo 98.8 5.6E-08 1.9E-12 95.8 13.2 103 40-142 3-171 (464)
127 2x3n_A Probable FAD-dependent 98.7 4.9E-08 1.7E-12 93.8 11.7 101 40-141 7-168 (399)
128 3h8l_A NADH oxidase; membrane 98.7 8E-09 2.7E-13 99.9 6.1 98 40-142 2-116 (409)
129 3uox_A Otemo; baeyer-villiger 98.7 3.6E-08 1.2E-12 99.1 11.0 102 40-141 10-151 (545)
130 2vou_A 2,6-dihydroxypyridine h 98.7 5.4E-08 1.8E-12 93.6 11.4 102 38-141 4-155 (397)
131 1hyu_A AHPF, alkyl hydroperoxi 98.7 8.4E-08 2.9E-12 95.9 12.9 104 38-141 211-328 (521)
132 1xhc_A NADH oxidase /nitrite r 98.7 1.3E-08 4.3E-13 97.4 6.1 99 38-142 7-116 (367)
133 1yvv_A Amine oxidase, flavin-c 98.7 1.8E-07 6.2E-12 87.2 13.9 98 40-139 3-162 (336)
134 1trb_A Thioredoxin reductase; 98.7 6.7E-08 2.3E-12 89.6 10.8 98 40-141 6-118 (320)
135 3fg2_P Putative rubredoxin red 98.7 2.5E-08 8.4E-13 96.4 7.9 97 40-141 2-112 (404)
136 3r9u_A Thioredoxin reductase; 98.7 4.8E-08 1.6E-12 90.1 9.6 99 39-142 4-121 (315)
137 3ef6_A Toluene 1,2-dioxygenase 98.7 6.3E-08 2.2E-12 93.8 10.6 99 40-142 3-114 (410)
138 3h28_A Sulfide-quinone reducta 98.7 7.3E-09 2.5E-13 101.0 3.9 98 40-142 3-112 (430)
139 2gv8_A Monooxygenase; FMO, FAD 98.7 7.1E-08 2.4E-12 94.4 10.9 102 38-141 5-181 (447)
140 3nix_A Flavoprotein/dehydrogen 98.7 7E-08 2.4E-12 93.1 10.7 100 40-139 6-166 (421)
141 3cty_A Thioredoxin reductase; 98.7 9.8E-08 3.3E-12 88.7 11.2 99 39-141 16-128 (319)
142 2a87_A TRXR, TR, thioredoxin r 98.7 7.7E-08 2.6E-12 90.1 10.4 99 39-141 14-128 (335)
143 4a5l_A Thioredoxin reductase; 98.7 9.9E-08 3.4E-12 88.2 10.9 99 40-141 5-123 (314)
144 1q1r_A Putidaredoxin reductase 98.7 5E-08 1.7E-12 95.2 9.1 100 39-142 4-117 (431)
145 3oc4_A Oxidoreductase, pyridin 98.6 4.6E-08 1.6E-12 95.9 8.5 101 40-142 3-118 (452)
146 1y0p_A Fumarate reductase flav 98.6 2.1E-07 7.3E-12 94.0 13.5 105 40-144 127-323 (571)
147 3ics_A Coenzyme A-disulfide re 98.6 4.9E-08 1.7E-12 99.0 8.3 103 38-142 35-155 (588)
148 3lxd_A FAD-dependent pyridine 98.6 5.1E-08 1.7E-12 94.5 8.0 100 39-142 9-122 (415)
149 1k0i_A P-hydroxybenzoate hydro 98.6 1.9E-07 6.6E-12 89.4 11.9 101 40-141 3-165 (394)
150 3iwa_A FAD-dependent pyridine 98.6 8.1E-08 2.8E-12 94.6 8.7 102 39-142 3-128 (472)
151 3dme_A Conserved exported prot 98.6 2.8E-07 9.4E-12 86.8 12.0 56 83-139 152-209 (369)
152 2gjc_A Thiazole biosynthetic e 98.6 1.8E-07 6E-12 87.8 10.0 164 40-206 66-321 (326)
153 1ryi_A Glycine oxidase; flavop 98.6 2.5E-07 8.4E-12 88.0 11.2 56 82-140 165-220 (382)
154 4gcm_A TRXR, thioredoxin reduc 98.6 3.6E-07 1.2E-11 84.6 12.0 98 41-142 8-119 (312)
155 3kd9_A Coenzyme A disulfide re 98.6 1.3E-07 4.6E-12 92.5 9.5 100 39-142 3-117 (449)
156 2gag_B Heterotetrameric sarcos 98.6 3.3E-07 1.1E-11 87.7 11.9 55 83-139 176-230 (405)
157 3s5w_A L-ornithine 5-monooxyge 98.6 1.2E-07 4.2E-12 92.9 8.9 102 41-142 32-195 (463)
158 1d4d_A Flavocytochrome C fumar 98.6 5.1E-07 1.7E-11 91.3 13.5 120 25-144 110-323 (572)
159 3ces_A MNMG, tRNA uridine 5-ca 98.6 3.7E-07 1.3E-11 92.8 12.4 99 40-140 29-182 (651)
160 1y56_B Sarcosine oxidase; dehy 98.6 7.5E-07 2.6E-11 84.7 13.9 54 84-139 152-205 (382)
161 3cgv_A Geranylgeranyl reductas 98.5 3.2E-07 1.1E-11 87.5 11.1 99 40-139 5-162 (397)
162 3atr_A Conserved archaeal prot 98.5 3.4E-07 1.2E-11 89.6 11.5 101 40-141 7-164 (453)
163 1w4x_A Phenylacetone monooxyge 98.5 5.1E-07 1.7E-11 90.6 12.9 98 40-137 17-152 (542)
164 4hb9_A Similarities with proba 98.5 6.4E-07 2.2E-11 85.6 13.0 100 41-141 3-168 (412)
165 2zxi_A TRNA uridine 5-carboxym 98.5 7.9E-07 2.7E-11 90.2 14.0 100 40-141 28-182 (637)
166 2gqw_A Ferredoxin reductase; f 98.5 1.8E-07 6E-12 90.6 8.8 100 39-142 7-116 (408)
167 3ntd_A FAD-dependent pyridine 98.5 1.1E-07 3.7E-12 95.8 7.3 101 40-142 2-120 (565)
168 2xdo_A TETX2 protein; tetracyc 98.5 5.7E-07 1.9E-11 86.4 12.1 102 38-141 25-184 (398)
169 3i3l_A Alkylhalidase CMLS; fla 98.5 7.4E-07 2.5E-11 90.4 13.4 102 38-140 22-189 (591)
170 2e5v_A L-aspartate oxidase; ar 98.5 2.6E-09 8.9E-14 105.6 -5.0 144 42-207 215-370 (472)
171 2gmh_A Electron transfer flavo 98.5 1E-06 3.5E-11 89.3 13.9 102 40-141 36-219 (584)
172 3rp8_A Flavoprotein monooxygen 98.5 5.1E-07 1.7E-11 86.9 11.1 101 38-142 22-184 (407)
173 3jsk_A Cypbp37 protein; octame 98.5 1.9E-06 6.6E-11 81.2 14.7 164 40-206 80-331 (344)
174 2vdc_G Glutamate synthase [NAD 98.5 7.2E-08 2.5E-12 94.9 5.1 90 38-138 121-218 (456)
175 4dgk_A Phytoene dehydrogenase; 98.5 1.2E-06 4E-11 86.6 13.3 51 87-138 227-277 (501)
176 1nhp_A NADH peroxidase; oxidor 98.5 1.9E-07 6.4E-12 91.4 7.1 101 40-142 1-118 (447)
177 3qj4_A Renalase; FAD/NAD(P)-bi 98.5 6.7E-07 2.3E-11 84.0 10.7 95 40-136 2-162 (342)
178 3ihg_A RDME; flavoenzyme, anth 98.5 7.2E-07 2.5E-11 89.2 11.2 100 40-139 6-183 (535)
179 3cp8_A TRNA uridine 5-carboxym 98.4 1.2E-06 4E-11 89.2 12.6 100 40-141 22-176 (641)
180 2uzz_A N-methyl-L-tryptophan o 98.4 1.1E-06 3.8E-11 83.1 11.4 53 83-138 151-203 (372)
181 4eqs_A Coenzyme A disulfide re 98.4 2.6E-07 8.9E-12 90.3 6.6 100 41-142 2-119 (437)
182 2aqj_A Tryptophan halogenase, 98.4 2.2E-06 7.7E-11 85.8 13.6 56 85-141 169-224 (538)
183 3fmw_A Oxygenase; mithramycin, 98.4 7.9E-07 2.7E-11 89.8 10.3 99 40-140 50-208 (570)
184 3e1t_A Halogenase; flavoprotei 98.4 1.9E-06 6.5E-11 85.8 12.9 101 40-141 8-174 (512)
185 2gf3_A MSOX, monomeric sarcosi 98.4 2.6E-06 8.7E-11 81.0 13.1 56 82-140 151-206 (389)
186 3ps9_A TRNA 5-methylaminomethy 98.4 2.4E-06 8.3E-11 87.9 13.8 54 84-139 420-473 (676)
187 2cdu_A NADPH oxidase; flavoenz 98.4 1.8E-07 6E-12 91.7 4.8 100 41-142 2-120 (452)
188 3cgb_A Pyridine nucleotide-dis 98.4 4.4E-07 1.5E-11 89.6 7.5 100 40-141 37-154 (480)
189 2qa2_A CABE, polyketide oxygen 98.4 4E-06 1.4E-10 83.3 14.2 101 38-140 11-167 (499)
190 2qae_A Lipoamide, dihydrolipoy 98.4 1.3E-06 4.6E-11 85.8 10.4 98 40-142 3-151 (468)
191 3dje_A Fructosyl amine: oxygen 98.4 3E-06 1E-10 82.2 12.7 55 83-138 163-220 (438)
192 4g6h_A Rotenone-insensitive NA 98.4 3.9E-07 1.3E-11 90.7 6.4 100 40-142 43-172 (502)
193 2qa1_A PGAE, polyketide oxygen 98.4 3.8E-06 1.3E-10 83.4 13.5 101 38-140 10-166 (500)
194 3c96_A Flavin-containing monoo 98.3 1.6E-06 5.5E-11 83.6 10.2 100 39-141 4-171 (410)
195 2bc0_A NADH oxidase; flavoprot 98.3 4.2E-07 1.4E-11 90.1 6.1 100 40-142 36-152 (490)
196 3l8k_A Dihydrolipoyl dehydroge 98.3 1.7E-06 5.7E-11 85.1 10.4 98 40-142 5-147 (466)
197 1dxl_A Dihydrolipoamide dehydr 98.3 1E-06 3.5E-11 86.6 8.7 99 39-142 6-154 (470)
198 3nyc_A D-arginine dehydrogenas 98.3 3E-06 1E-10 80.2 11.3 52 85-139 158-209 (381)
199 1ebd_A E3BD, dihydrolipoamide 98.3 1.8E-06 6E-11 84.6 9.8 97 40-142 4-148 (455)
200 1mo9_A ORF3; nucleotide bindin 98.3 1.8E-06 6.3E-11 86.2 10.1 96 40-142 44-189 (523)
201 1y56_A Hypothetical protein PH 98.3 7.7E-07 2.6E-11 88.3 7.0 100 40-142 109-222 (493)
202 3pvc_A TRNA 5-methylaminomethy 98.3 5.6E-06 1.9E-10 85.5 13.7 53 85-139 416-469 (689)
203 2e4g_A Tryptophan halogenase; 98.3 6.9E-06 2.4E-10 82.5 13.9 56 85-141 198-254 (550)
204 4at0_A 3-ketosteroid-delta4-5a 98.3 5E-06 1.7E-10 82.7 12.7 64 82-145 203-271 (510)
205 1v59_A Dihydrolipoamide dehydr 98.3 2.7E-06 9.2E-11 83.8 10.6 96 40-140 6-158 (478)
206 1zk7_A HGII, reductase, mercur 98.3 2.5E-06 8.5E-11 83.8 10.2 99 39-142 4-153 (467)
207 3ka7_A Oxidoreductase; structu 98.3 7.4E-06 2.5E-10 78.9 13.3 56 87-144 202-257 (425)
208 3urh_A Dihydrolipoyl dehydroge 98.3 6.3E-06 2.2E-10 81.5 12.9 97 39-140 25-171 (491)
209 1gte_A Dihydropyrimidine dehyd 98.3 3.9E-07 1.3E-11 98.2 4.1 94 39-141 187-290 (1025)
210 1zmd_A Dihydrolipoyl dehydroge 98.3 2.6E-06 8.9E-11 83.8 9.6 98 40-142 7-155 (474)
211 1m6i_A Programmed cell death p 98.2 5.9E-07 2E-11 89.1 4.9 99 39-141 11-146 (493)
212 2yqu_A 2-oxoglutarate dehydrog 98.2 1.8E-06 6.1E-11 84.6 8.0 96 41-142 3-144 (455)
213 1cjc_A Protein (adrenodoxin re 98.2 2.9E-07 1E-11 90.6 2.4 91 38-139 5-106 (460)
214 2oln_A NIKD protein; flavoprot 98.2 1.1E-05 3.7E-10 77.2 13.3 50 86-138 158-207 (397)
215 3o0h_A Glutathione reductase; 98.2 2.5E-06 8.5E-11 84.3 8.8 93 40-140 27-167 (484)
216 1lvl_A Dihydrolipoamide dehydr 98.2 4.7E-06 1.6E-10 81.7 10.6 93 40-141 6-148 (458)
217 2hqm_A GR, grase, glutathione 98.2 5.3E-06 1.8E-10 81.8 10.8 97 40-142 12-163 (479)
218 2r9z_A Glutathione amide reduc 98.2 2.6E-06 8.8E-11 83.8 8.5 94 40-142 5-145 (463)
219 2a8x_A Dihydrolipoyl dehydroge 98.2 5.1E-06 1.8E-10 81.5 10.6 96 40-141 4-148 (464)
220 1xdi_A RV3303C-LPDA; reductase 98.2 5.4E-06 1.8E-10 82.2 10.8 101 40-142 3-159 (499)
221 2gag_A Heterotetrameric sarcos 98.2 4E-06 1.4E-10 89.7 10.6 100 40-141 129-255 (965)
222 3c4n_A Uncharacterized protein 98.2 2.2E-06 7.5E-11 82.6 7.8 97 40-139 37-236 (405)
223 2v3a_A Rubredoxin reductase; a 98.2 2E-06 6.7E-11 82.3 7.4 98 39-141 4-115 (384)
224 3nrn_A Uncharacterized protein 98.2 1.1E-05 3.9E-10 77.7 12.8 54 87-144 195-248 (421)
225 1ojt_A Surface protein; redox- 98.2 4.2E-06 1.4E-10 82.6 9.7 97 40-141 7-162 (482)
226 1onf_A GR, grase, glutathione 98.2 2E-06 7E-11 85.3 7.3 95 40-142 3-156 (500)
227 1ges_A Glutathione reductase; 98.2 5.1E-06 1.8E-10 81.3 10.1 94 40-142 5-146 (450)
228 1ps9_A 2,4-dienoyl-COA reducta 98.2 1.8E-06 6.3E-11 88.8 7.1 87 39-142 373-470 (671)
229 2eq6_A Pyruvate dehydrogenase 98.2 2.7E-06 9.3E-11 83.6 7.9 94 40-142 7-146 (464)
230 1lqt_A FPRA; NADP+ derivative, 98.2 3.1E-07 1.1E-11 90.3 1.1 90 38-138 2-107 (456)
231 2pyx_A Tryptophan halogenase; 98.2 2.6E-05 9E-10 77.7 15.1 56 85-141 179-235 (526)
232 1pj5_A N,N-dimethylglycine oxi 98.2 1.1E-05 3.8E-10 84.9 13.0 55 83-139 153-207 (830)
233 3k30_A Histamine dehydrogenase 98.2 8.1E-07 2.8E-11 91.8 4.1 89 38-140 390-489 (690)
234 2weu_A Tryptophan 5-halogenase 98.2 1.7E-05 5.7E-10 78.7 13.4 56 85-141 177-232 (511)
235 4dna_A Probable glutathione re 98.1 2.7E-06 9.4E-11 83.5 6.7 93 40-140 6-146 (463)
236 2qcu_A Aerobic glycerol-3-phos 98.1 2.5E-05 8.5E-10 77.5 12.9 55 83-139 151-210 (501)
237 3lad_A Dihydrolipoamide dehydr 98.1 1.1E-05 3.8E-10 79.3 10.0 97 40-141 4-156 (476)
238 1fec_A Trypanothione reductase 98.1 5.1E-06 1.8E-10 82.2 7.5 98 40-142 4-166 (490)
239 2e5v_A L-aspartate oxidase; ar 98.1 2.3E-05 7.7E-10 77.3 11.8 98 41-140 1-177 (472)
240 2wpf_A Trypanothione reductase 98.1 4.5E-06 1.5E-10 82.8 6.6 96 40-142 8-170 (495)
241 3da1_A Glycerol-3-phosphate de 98.0 2.5E-05 8.5E-10 78.7 11.0 53 85-138 174-231 (561)
242 3axb_A Putative oxidoreductase 98.0 1.9E-05 6.5E-10 76.8 9.9 54 84-138 184-253 (448)
243 3dk9_A Grase, GR, glutathione 98.0 7E-06 2.4E-10 80.8 6.8 97 39-142 20-163 (478)
244 1o94_A Tmadh, trimethylamine d 98.0 3.1E-06 1.1E-10 88.0 4.2 88 39-140 389-492 (729)
245 3c4a_A Probable tryptophan hyd 98.0 3.4E-06 1.2E-10 80.5 4.2 88 40-140 1-144 (381)
246 3qfa_A Thioredoxin reductase 1 98.0 2.6E-05 9E-10 77.7 10.2 98 40-142 33-188 (519)
247 2r0c_A REBC; flavin adenine di 98.0 2.6E-05 8.9E-10 78.3 10.1 97 40-141 27-198 (549)
248 2dkh_A 3-hydroxybenzoate hydro 97.9 3E-05 1E-09 79.3 10.6 102 40-141 33-213 (639)
249 1kf6_A Fumarate reductase flav 97.9 7.1E-05 2.4E-09 76.0 12.2 97 40-137 6-195 (602)
250 3dgz_A Thioredoxin reductase 2 97.9 7.6E-05 2.6E-09 73.6 12.1 98 40-142 7-162 (488)
251 3dgh_A TRXR-1, thioredoxin red 97.9 7.8E-05 2.7E-09 73.4 11.8 98 40-142 10-165 (483)
252 2wdq_A Succinate dehydrogenase 97.9 0.00014 4.8E-09 73.6 13.8 97 41-137 9-204 (588)
253 4gut_A Lysine-specific histone 97.8 8.2E-05 2.8E-09 77.7 11.6 63 12-74 288-371 (776)
254 2rgh_A Alpha-glycerophosphate 97.8 0.00015 5E-09 73.2 11.7 34 39-72 32-65 (571)
255 2x8g_A Thioredoxin glutathione 97.7 0.0001 3.6E-09 74.6 10.2 99 39-142 107-264 (598)
256 3ic9_A Dihydrolipoamide dehydr 97.7 5.1E-05 1.7E-09 75.1 7.0 33 40-72 9-41 (492)
257 1chu_A Protein (L-aspartate ox 97.7 0.00029 9.8E-09 70.6 12.5 33 40-73 9-41 (540)
258 3i6d_A Protoporphyrinogen oxid 97.7 0.00022 7.4E-09 69.2 11.0 40 96-137 248-287 (470)
259 3kkj_A Amine oxidase, flavin-c 97.6 5.6E-05 1.9E-09 66.2 5.0 34 41-74 4-37 (336)
260 2h88_A Succinate dehydrogenase 97.6 0.0004 1.4E-08 70.7 11.9 32 41-72 20-51 (621)
261 1pn0_A Phenol 2-monooxygenase; 97.6 0.00036 1.2E-08 71.6 11.4 33 40-72 9-46 (665)
262 3pl8_A Pyranose 2-oxidase; sub 97.5 0.00027 9.2E-09 72.0 9.1 52 95-146 274-331 (623)
263 2bs2_A Quinol-fumarate reducta 97.5 0.00076 2.6E-08 69.1 12.3 33 40-72 6-38 (660)
264 1jnr_A Adenylylsulfate reducta 97.3 0.0013 4.5E-08 67.1 11.5 33 40-72 23-59 (643)
265 4b1b_A TRXR, thioredoxin reduc 97.1 0.0016 5.4E-08 65.2 9.6 97 41-142 44-200 (542)
266 2iid_A L-amino-acid oxidase; f 97.0 0.00062 2.1E-08 66.9 5.9 74 26-99 15-110 (498)
267 4b63_A L-ornithine N5 monooxyg 97.0 0.0033 1.1E-07 62.2 10.9 102 41-142 41-217 (501)
268 3lk7_A UDP-N-acetylmuramoylala 97.0 0.0011 3.8E-08 64.8 6.9 82 38-144 8-89 (451)
269 3eag_A UDP-N-acetylmuramate:L- 96.9 0.0013 4.6E-08 61.3 6.9 81 38-145 3-84 (326)
270 3gyx_A Adenylylsulfate reducta 96.9 0.0022 7.4E-08 65.7 8.9 32 40-71 23-60 (662)
271 3dfz_A SIRC, precorrin-2 dehyd 96.8 0.0044 1.5E-07 54.6 9.0 107 38-175 30-141 (223)
272 3ihm_A Styrene monooxygenase A 96.6 0.0017 5.9E-08 62.8 4.8 33 40-72 23-55 (430)
273 2b9w_A Putative aminooxidase; 96.5 0.0029 9.8E-08 60.6 5.8 37 38-74 5-42 (424)
274 3g5s_A Methylenetetrahydrofola 96.4 0.0034 1.2E-07 60.1 5.6 33 40-72 2-34 (443)
275 3nks_A Protoporphyrinogen oxid 96.4 0.0026 8.9E-08 61.9 4.7 35 40-74 3-39 (477)
276 4gde_A UDP-galactopyranose mut 96.3 0.0024 8.2E-08 62.6 4.4 35 41-75 12-47 (513)
277 2e1m_A L-glutamate oxidase; L- 96.3 0.0039 1.3E-07 59.4 5.5 37 38-74 43-80 (376)
278 1s3e_A Amine oxidase [flavin-c 96.3 0.0039 1.3E-07 61.7 5.5 36 39-74 4-39 (520)
279 2jae_A L-amino acid oxidase; o 96.3 0.0043 1.5E-07 60.7 5.6 39 38-76 10-48 (489)
280 1rsg_A FMS1 protein; FAD bindi 96.2 0.004 1.4E-07 61.6 5.2 37 39-75 8-45 (516)
281 1c0p_A D-amino acid oxidase; a 96.2 0.0041 1.4E-07 58.3 5.0 34 39-72 6-39 (363)
282 2ivd_A PPO, PPOX, protoporphyr 96.1 0.0047 1.6E-07 60.1 5.3 38 38-75 15-52 (478)
283 2bcg_G Secretory pathway GDP d 96.1 0.0046 1.6E-07 60.2 5.2 39 39-77 11-49 (453)
284 3i83_A 2-dehydropantoate 2-red 96.0 0.016 5.5E-07 53.6 8.0 84 40-145 3-89 (320)
285 1sez_A Protoporphyrinogen oxid 96.0 0.0059 2E-07 59.9 5.3 37 39-75 13-49 (504)
286 2yg5_A Putrescine oxidase; oxi 96.0 0.0061 2.1E-07 58.9 5.3 60 40-100 6-81 (453)
287 2g1u_A Hypothetical protein TM 96.0 0.0085 2.9E-07 49.2 5.3 37 38-74 18-54 (155)
288 2vvm_A Monoamine oxidase N; FA 95.9 0.0064 2.2E-07 59.5 5.2 37 39-75 39-75 (495)
289 2bi7_A UDP-galactopyranose mut 95.9 0.0063 2.2E-07 57.9 4.8 36 40-75 4-39 (384)
290 3g3e_A D-amino-acid oxidase; F 95.8 0.005 1.7E-07 57.4 3.7 32 41-72 2-39 (351)
291 2x5o_A UDP-N-acetylmuramoylala 95.8 0.0041 1.4E-07 60.4 3.1 78 38-144 4-81 (439)
292 4hv4_A UDP-N-acetylmuramate--L 95.7 0.01 3.4E-07 58.6 5.7 77 38-144 21-98 (494)
293 3hdq_A UDP-galactopyranose mut 95.7 0.0087 3E-07 57.4 5.0 37 39-75 29-65 (397)
294 3p1w_A Rabgdi protein; GDI RAB 95.7 0.021 7.3E-07 55.9 7.8 58 81-138 256-313 (475)
295 1id1_A Putative potassium chan 95.7 0.015 5E-07 47.6 5.7 34 38-71 2-35 (153)
296 1v0j_A UDP-galactopyranose mut 95.7 0.0089 3.1E-07 57.1 4.9 37 39-75 7-44 (399)
297 2z3y_A Lysine-specific histone 95.6 0.011 3.7E-07 60.5 5.6 38 39-76 107-144 (662)
298 3lov_A Protoporphyrinogen oxid 95.6 0.008 2.7E-07 58.5 4.3 36 39-74 4-41 (475)
299 1i8t_A UDP-galactopyranose mut 95.6 0.0093 3.2E-07 56.4 4.5 35 41-75 3-37 (367)
300 2xag_A Lysine-specific histone 95.6 0.012 4.1E-07 61.9 5.7 39 38-76 277-315 (852)
301 3llv_A Exopolyphosphatase-rela 95.4 0.013 4.4E-07 47.0 4.3 33 39-71 6-38 (141)
302 3hn2_A 2-dehydropantoate 2-red 95.4 0.022 7.5E-07 52.5 6.2 84 40-145 3-87 (312)
303 3fwz_A Inner membrane protein 95.3 0.015 5E-07 46.9 4.3 77 39-139 7-83 (140)
304 1lss_A TRK system potassium up 95.3 0.014 4.8E-07 46.3 4.2 33 39-71 4-36 (140)
305 4dsg_A UDP-galactopyranose mut 95.3 0.017 5.9E-07 56.7 5.6 36 39-74 9-45 (484)
306 2hmt_A YUAA protein; RCK, KTN, 95.1 0.022 7.4E-07 45.4 4.6 34 38-71 5-38 (144)
307 3ghy_A Ketopantoate reductase 95.1 0.026 8.9E-07 52.6 5.8 78 39-138 3-81 (335)
308 3ic5_A Putative saccharopine d 95.1 0.015 5.2E-07 44.6 3.6 35 38-72 4-39 (118)
309 3hwr_A 2-dehydropantoate 2-red 94.8 0.04 1.4E-06 50.9 6.3 80 38-139 18-98 (318)
310 1d5t_A Guanine nucleotide diss 94.8 0.03 1E-06 54.1 5.5 38 39-76 6-43 (433)
311 3hn7_A UDP-N-acetylmuramate-L- 94.7 0.049 1.7E-06 54.1 6.9 80 38-145 18-98 (524)
312 1b37_A Protein (polyamine oxid 94.7 0.033 1.1E-06 54.1 5.5 38 39-76 4-42 (472)
313 3p1w_A Rabgdi protein; GDI RAB 94.5 0.032 1.1E-06 54.7 5.0 38 40-77 21-58 (475)
314 3c85_A Putative glutathione-re 94.4 0.028 9.4E-07 47.3 3.8 34 39-72 39-73 (183)
315 3ado_A Lambda-crystallin; L-gu 94.4 0.029 9.9E-07 52.1 4.1 37 38-74 5-41 (319)
316 3ojo_A CAP5O; rossmann fold, c 94.4 0.16 5.4E-06 49.1 9.4 36 38-73 10-45 (431)
317 1kyq_A Met8P, siroheme biosynt 94.2 0.036 1.2E-06 50.2 4.3 34 38-71 12-45 (274)
318 2vvm_A Monoamine oxidase N; FA 94.1 0.11 3.8E-06 50.6 7.9 55 81-137 255-310 (495)
319 4ezb_A Uncharacterized conserv 94.0 0.12 4.3E-06 47.6 7.7 35 39-73 24-59 (317)
320 3ego_A Probable 2-dehydropanto 94.0 0.1 3.5E-06 47.9 7.0 76 40-138 3-78 (307)
321 4e12_A Diketoreductase; oxidor 93.9 0.04 1.4E-06 50.0 4.0 36 39-74 4-39 (283)
322 3qsg_A NAD-binding phosphogluc 93.7 0.09 3.1E-06 48.4 6.1 34 39-72 24-58 (312)
323 3ayj_A Pro-enzyme of L-phenyla 93.7 0.025 8.6E-07 58.2 2.4 35 40-74 57-100 (721)
324 1kf6_A Fumarate reductase flav 93.4 0.062 2.1E-06 54.2 4.8 54 151-207 358-413 (602)
325 3e8x_A Putative NAD-dependent 93.2 0.094 3.2E-06 45.6 5.0 36 38-73 20-56 (236)
326 3oj0_A Glutr, glutamyl-tRNA re 93.1 0.043 1.5E-06 44.2 2.4 34 38-71 20-53 (144)
327 3l4b_C TRKA K+ channel protien 93.0 0.07 2.4E-06 46.2 3.9 31 41-71 2-32 (218)
328 3gpi_A NAD-dependent epimerase 92.9 0.13 4.3E-06 46.2 5.6 35 39-73 3-37 (286)
329 1kdg_A CDH, cellobiose dehydro 92.7 0.094 3.2E-06 52.1 4.8 33 40-72 8-40 (546)
330 3phh_A Shikimate dehydrogenase 92.6 0.19 6.3E-06 45.4 6.2 47 26-72 105-151 (269)
331 2bcg_G Secretory pathway GDP d 92.5 0.22 7.4E-06 48.2 7.0 59 81-140 242-301 (453)
332 1pjq_A CYSG, siroheme synthase 92.5 0.22 7.4E-06 48.5 7.0 79 38-144 11-90 (457)
333 2qyt_A 2-dehydropantoate 2-red 92.4 0.085 2.9E-06 48.1 3.9 84 40-144 9-100 (317)
334 4dio_A NAD(P) transhydrogenase 92.4 0.14 4.8E-06 49.0 5.3 36 38-73 189-224 (405)
335 3p2y_A Alanine dehydrogenase/p 92.3 0.1 3.5E-06 49.5 4.3 36 38-73 183-218 (381)
336 1d5t_A Guanine nucleotide diss 92.3 0.11 3.9E-06 49.9 4.8 58 81-140 234-291 (433)
337 2dpo_A L-gulonate 3-dehydrogen 92.1 0.1 3.6E-06 48.3 4.0 35 39-73 6-40 (319)
338 3i6i_A Putative leucoanthocyan 92.0 0.54 1.9E-05 43.3 8.9 56 39-100 10-66 (346)
339 1chu_A Protein (L-aspartate ox 92.0 0.12 4.2E-06 51.4 4.6 56 82-137 139-206 (540)
340 4b4o_A Epimerase family protei 92.0 0.16 5.3E-06 45.9 5.0 33 41-73 2-35 (298)
341 3rkr_A Short chain oxidoreduct 92.0 0.43 1.5E-05 42.3 7.8 55 34-97 24-79 (262)
342 2raf_A Putative dinucleotide-b 91.9 0.17 5.7E-06 43.7 4.9 36 38-73 18-53 (209)
343 3ius_A Uncharacterized conserv 91.9 0.13 4.5E-06 46.0 4.4 34 39-72 5-38 (286)
344 1x13_A NAD(P) transhydrogenase 91.9 0.15 5.2E-06 48.7 5.0 36 38-73 171-206 (401)
345 1hdo_A Biliverdin IX beta redu 91.8 0.17 5.9E-06 42.5 4.8 36 39-74 3-39 (206)
346 3ksu_A 3-oxoacyl-acyl carrier 91.7 0.48 1.7E-05 42.0 7.9 55 38-98 10-65 (262)
347 1l7d_A Nicotinamide nucleotide 91.7 0.18 6.2E-06 47.8 5.2 36 38-73 171-206 (384)
348 1f0y_A HCDH, L-3-hydroxyacyl-C 91.6 0.17 5.7E-06 46.2 4.8 35 39-73 15-49 (302)
349 3pgx_A Carveol dehydrogenase; 91.6 0.76 2.6E-05 41.1 9.1 61 37-97 13-78 (280)
350 3ruf_A WBGU; rossmann fold, UD 91.6 0.35 1.2E-05 44.5 7.0 46 27-73 14-60 (351)
351 1vg0_A RAB proteins geranylger 91.6 0.57 2E-05 47.5 9.0 61 80-140 377-438 (650)
352 1nyt_A Shikimate 5-dehydrogena 91.5 0.34 1.1E-05 43.5 6.7 46 26-71 102-151 (271)
353 2eez_A Alanine dehydrogenase; 91.5 0.16 5.5E-06 47.9 4.6 35 38-72 165-199 (369)
354 4ffl_A PYLC; amino acid, biosy 91.5 0.19 6.4E-06 47.0 5.1 34 40-73 2-35 (363)
355 3nks_A Protoporphyrinogen oxid 91.5 0.3 1E-05 47.0 6.7 54 82-137 235-288 (477)
356 3t37_A Probable dehydrogenase; 91.4 0.14 4.7E-06 50.4 4.2 33 41-73 19-52 (526)
357 3uve_A Carveol dehydrogenase ( 91.3 0.81 2.8E-05 40.9 9.0 59 38-96 10-76 (286)
358 1ks9_A KPA reductase;, 2-dehyd 91.3 0.2 6.8E-06 44.9 4.9 33 41-73 2-34 (291)
359 2bs2_A Quinol-fumarate reducta 91.2 0.16 5.5E-06 51.8 4.6 56 81-137 158-218 (660)
360 3kkj_A Amine oxidase, flavin-c 91.2 0.15 5.2E-06 43.7 3.9 40 159-209 288-327 (336)
361 3ew7_A LMO0794 protein; Q8Y8U8 91.2 0.23 8E-06 42.2 5.0 32 41-72 2-34 (221)
362 1jw9_B Molybdopterin biosynthe 91.2 0.16 5.6E-06 45.1 4.1 35 38-72 30-65 (249)
363 2vhw_A Alanine dehydrogenase; 91.0 0.18 6.2E-06 47.7 4.5 35 38-72 167-201 (377)
364 4id9_A Short-chain dehydrogena 91.0 0.23 7.9E-06 45.7 5.2 35 38-72 18-53 (347)
365 3sx2_A Putative 3-ketoacyl-(ac 90.9 0.78 2.7E-05 40.8 8.5 59 38-96 12-74 (278)
366 3gyx_A Adenylylsulfate reducta 90.9 0.12 4.2E-06 52.7 3.4 56 81-136 166-230 (662)
367 3dtt_A NADP oxidoreductase; st 90.9 0.2 6.7E-06 44.3 4.3 36 38-73 18-53 (245)
368 1n4w_A CHOD, cholesterol oxida 90.9 0.23 7.7E-06 48.9 5.2 34 40-73 6-39 (504)
369 3vtf_A UDP-glucose 6-dehydroge 90.7 0.27 9.2E-06 47.6 5.4 58 40-97 22-86 (444)
370 3vps_A TUNA, NAD-dependent epi 90.7 0.27 9.2E-06 44.4 5.2 36 38-73 6-42 (321)
371 4iin_A 3-ketoacyl-acyl carrier 90.6 0.63 2.1E-05 41.4 7.5 52 38-97 28-80 (271)
372 4a7p_A UDP-glucose dehydrogena 90.6 0.56 1.9E-05 45.4 7.5 61 39-99 8-75 (446)
373 2rir_A Dipicolinate synthase, 90.5 0.28 9.5E-06 44.7 5.1 36 37-72 155-190 (300)
374 1p77_A Shikimate 5-dehydrogena 90.5 0.35 1.2E-05 43.4 5.8 47 26-72 102-152 (272)
375 2z1m_A GDP-D-mannose dehydrata 90.5 0.27 9.3E-06 44.9 5.1 36 38-73 2-38 (345)
376 3pp8_A Glyoxylate/hydroxypyruv 90.5 0.34 1.2E-05 44.7 5.8 37 38-74 138-174 (315)
377 3d4o_A Dipicolinate synthase s 90.5 0.29 9.9E-06 44.5 5.2 36 37-72 153-188 (293)
378 3pef_A 6-phosphogluconate dehy 90.5 0.26 8.8E-06 44.5 4.8 34 40-73 2-35 (287)
379 2gas_A Isoflavone reductase; N 90.5 0.77 2.6E-05 41.2 8.1 57 39-99 2-60 (307)
380 1ju2_A HydroxynitrIle lyase; f 90.4 0.15 5E-06 50.7 3.4 32 41-73 28-59 (536)
381 3ond_A Adenosylhomocysteinase; 90.4 0.22 7.5E-06 48.7 4.4 35 37-71 263-297 (488)
382 3ngx_A Bifunctional protein fo 90.4 0.42 1.4E-05 43.1 6.0 48 23-71 135-183 (276)
383 1zej_A HBD-9, 3-hydroxyacyl-CO 90.3 0.2 7E-06 45.7 4.0 34 38-72 11-44 (293)
384 1qyc_A Phenylcoumaran benzylic 90.3 0.79 2.7E-05 41.1 8.0 58 39-100 4-62 (308)
385 3q2o_A Phosphoribosylaminoimid 90.2 0.3 1E-05 46.1 5.3 35 38-72 13-47 (389)
386 3pxx_A Carveol dehydrogenase; 90.2 1.2 4.1E-05 39.7 9.1 59 38-96 9-71 (287)
387 1pjc_A Protein (L-alanine dehy 90.2 0.24 8.2E-06 46.6 4.5 35 38-72 166-200 (361)
388 3tsc_A Putative oxidoreductase 90.2 1.2 4.3E-05 39.5 9.1 59 38-96 10-73 (277)
389 1lu9_A Methylene tetrahydromet 90.1 0.57 1.9E-05 42.3 6.8 34 38-71 118-152 (287)
390 3gvp_A Adenosylhomocysteinase 90.1 0.24 8.3E-06 47.6 4.4 35 38-72 219-253 (435)
391 3dhn_A NAD-dependent epimerase 90.0 0.25 8.5E-06 42.4 4.2 37 40-76 5-42 (227)
392 2dkn_A 3-alpha-hydroxysteroid 89.9 0.35 1.2E-05 42.1 5.1 34 40-73 2-36 (255)
393 3h2s_A Putative NADH-flavin re 89.9 0.34 1.2E-05 41.4 4.9 32 41-72 2-34 (224)
394 2vns_A Metalloreductase steap3 89.9 0.36 1.2E-05 41.6 5.1 33 39-71 28-60 (215)
395 1coy_A Cholesterol oxidase; ox 89.9 0.29 1E-05 48.1 5.0 34 40-73 12-45 (507)
396 3qiv_A Short-chain dehydrogena 89.8 1.2 4.2E-05 38.8 8.7 51 38-97 8-59 (253)
397 3g17_A Similar to 2-dehydropan 89.8 0.23 7.9E-06 45.1 3.9 34 40-73 3-36 (294)
398 3t7c_A Carveol dehydrogenase; 89.8 1.4 4.6E-05 39.9 9.2 59 38-97 27-90 (299)
399 2ew2_A 2-dehydropantoate 2-red 89.8 0.24 8.1E-06 44.9 4.0 32 40-71 4-35 (316)
400 2x6t_A ADP-L-glycero-D-manno-h 89.8 0.33 1.1E-05 44.9 5.1 36 38-73 45-82 (357)
401 1vg0_A RAB proteins geranylger 89.7 0.36 1.2E-05 49.0 5.5 53 41-94 10-62 (650)
402 2f00_A UDP-N-acetylmuramate--L 89.7 0.32 1.1E-05 47.7 5.1 52 39-102 19-71 (491)
403 1p3d_A UDP-N-acetylmuramate--a 89.7 0.28 9.7E-06 47.8 4.7 52 39-102 18-70 (475)
404 3n58_A Adenosylhomocysteinase; 89.7 0.28 9.6E-06 47.4 4.5 36 37-72 245-280 (464)
405 1bg6_A N-(1-D-carboxylethyl)-L 89.6 0.24 8.3E-06 45.9 4.0 33 39-71 4-36 (359)
406 1qyd_A Pinoresinol-lariciresin 89.6 1 3.4E-05 40.5 8.1 57 39-100 4-61 (313)
407 3s55_A Putative short-chain de 89.6 1.5 5.1E-05 39.1 9.2 60 38-97 9-72 (281)
408 3tnl_A Shikimate dehydrogenase 89.6 0.65 2.2E-05 42.8 6.8 47 26-72 137-188 (315)
409 3ijr_A Oxidoreductase, short c 89.5 1.1 3.9E-05 40.3 8.4 52 38-97 46-98 (291)
410 3lyl_A 3-oxoacyl-(acyl-carrier 89.5 0.88 3E-05 39.6 7.4 50 38-96 4-54 (247)
411 2pzm_A Putative nucleotide sug 89.5 0.36 1.2E-05 44.2 5.1 35 38-72 19-54 (330)
412 4e4t_A Phosphoribosylaminoimid 89.5 0.36 1.2E-05 46.3 5.2 35 38-72 34-68 (419)
413 2dbq_A Glyoxylate reductase; D 89.5 0.41 1.4E-05 44.4 5.4 35 38-72 149-183 (334)
414 3doj_A AT3G25530, dehydrogenas 89.4 0.33 1.1E-05 44.5 4.7 35 39-73 21-55 (310)
415 1y1p_A ARII, aldehyde reductas 89.4 0.38 1.3E-05 43.8 5.2 35 38-72 10-45 (342)
416 4g65_A TRK system potassium up 89.4 0.36 1.2E-05 47.0 5.1 34 39-72 3-36 (461)
417 1cyd_A Carbonyl reductase; sho 89.4 0.45 1.5E-05 41.3 5.4 34 38-71 6-40 (244)
418 1qsg_A Enoyl-[acyl-carrier-pro 89.4 0.91 3.1E-05 40.1 7.5 35 38-72 8-45 (265)
419 3l9w_A Glutathione-regulated p 89.3 0.31 1E-05 46.8 4.5 75 39-137 4-78 (413)
420 2gk4_A Conserved hypothetical 89.3 0.53 1.8E-05 41.4 5.7 37 38-74 2-55 (232)
421 3ce6_A Adenosylhomocysteinase; 89.3 0.29 1E-05 48.0 4.4 36 37-72 272-307 (494)
422 1zcj_A Peroxisomal bifunctiona 89.3 0.23 8E-06 48.3 3.7 35 39-73 37-71 (463)
423 1s3e_A Amine oxidase [flavin-c 89.2 0.42 1.4E-05 46.9 5.6 53 84-138 215-267 (520)
424 3ucx_A Short chain dehydrogena 89.2 1.1 3.9E-05 39.5 8.0 50 38-96 10-60 (264)
425 2ydy_A Methionine adenosyltran 89.2 0.34 1.2E-05 43.8 4.6 34 39-72 2-36 (315)
426 3orq_A N5-carboxyaminoimidazol 89.2 0.42 1.4E-05 45.0 5.4 36 38-73 11-46 (377)
427 3nlc_A Uncharacterized protein 89.2 0.15 5.1E-06 50.9 2.3 43 155-207 497-540 (549)
428 3jyo_A Quinate/shikimate dehyd 89.2 0.61 2.1E-05 42.3 6.2 46 26-71 110-160 (283)
429 3oig_A Enoyl-[acyl-carrier-pro 89.1 0.44 1.5E-05 42.2 5.2 35 38-72 6-43 (266)
430 1u7z_A Coenzyme A biosynthesis 89.0 0.5 1.7E-05 41.4 5.3 35 38-72 7-58 (226)
431 3e03_A Short chain dehydrogena 89.0 0.71 2.4E-05 41.2 6.5 39 38-76 5-44 (274)
432 3h7a_A Short chain dehydrogena 89.0 0.86 2.9E-05 40.1 7.0 36 38-73 6-42 (252)
433 4a5o_A Bifunctional protein fo 89.0 0.47 1.6E-05 43.0 5.2 35 37-71 159-194 (286)
434 3o38_A Short chain dehydrogena 88.9 0.32 1.1E-05 43.1 4.2 35 38-72 21-57 (266)
435 3d3w_A L-xylulose reductase; u 88.9 0.48 1.6E-05 41.2 5.2 34 38-71 6-40 (244)
436 3pdu_A 3-hydroxyisobutyrate de 88.9 0.26 8.8E-06 44.5 3.5 34 40-73 2-35 (287)
437 1vl0_A DTDP-4-dehydrorhamnose 88.9 0.29 9.9E-06 43.8 3.8 34 38-71 11-45 (292)
438 3o8q_A Shikimate 5-dehydrogena 88.9 0.76 2.6E-05 41.6 6.6 46 26-71 109-159 (281)
439 4a26_A Putative C-1-tetrahydro 88.9 0.47 1.6E-05 43.3 5.2 50 23-72 148-199 (300)
440 3qha_A Putative oxidoreductase 88.9 0.31 1E-05 44.3 4.0 35 39-73 15-49 (296)
441 3v2g_A 3-oxoacyl-[acyl-carrier 88.8 1.4 4.9E-05 39.2 8.4 52 38-97 30-82 (271)
442 2y0c_A BCEC, UDP-glucose dehyd 88.8 0.27 9.4E-06 48.1 3.9 34 39-72 8-41 (478)
443 1jay_A Coenzyme F420H2:NADP+ o 88.8 0.31 1.1E-05 41.6 3.8 32 41-72 2-34 (212)
444 3ko8_A NAD-dependent epimerase 88.8 0.43 1.5E-05 43.0 5.0 34 40-73 1-35 (312)
445 1nvt_A Shikimate 5'-dehydrogen 88.8 0.56 1.9E-05 42.4 5.7 45 26-71 111-159 (287)
446 1b0a_A Protein (fold bifunctio 88.8 0.48 1.6E-05 43.0 5.1 36 37-72 157-193 (288)
447 3tjr_A Short chain dehydrogena 88.7 1.3 4.3E-05 40.2 8.1 50 38-96 30-80 (301)
448 1lld_A L-lactate dehydrogenase 88.7 0.43 1.5E-05 43.6 4.9 35 38-72 6-42 (319)
449 3gg2_A Sugar dehydrogenase, UD 88.7 0.3 1E-05 47.4 4.0 33 40-72 3-35 (450)
450 3g79_A NDP-N-acetyl-D-galactos 88.7 0.52 1.8E-05 46.1 5.7 36 38-73 17-54 (478)
451 3h9u_A Adenosylhomocysteinase; 88.7 0.36 1.2E-05 46.5 4.4 35 38-72 210-244 (436)
452 3k6j_A Protein F01G10.3, confi 88.7 0.31 1E-05 47.5 4.0 35 39-73 54-88 (460)
453 2gcg_A Glyoxylate reductase/hy 88.7 0.47 1.6E-05 44.0 5.2 35 38-72 154-188 (330)
454 4gx0_A TRKA domain protein; me 88.6 0.53 1.8E-05 46.8 5.9 60 18-77 326-386 (565)
455 3ba1_A HPPR, hydroxyphenylpyru 88.6 0.51 1.7E-05 43.8 5.4 36 38-73 163-198 (333)
456 4gbj_A 6-phosphogluconate dehy 88.6 0.98 3.4E-05 41.1 7.2 33 40-72 6-38 (297)
457 3g0o_A 3-hydroxyisobutyrate de 88.6 0.35 1.2E-05 44.0 4.2 34 39-72 7-40 (303)
458 2aef_A Calcium-gated potassium 88.6 0.19 6.6E-06 43.8 2.3 33 39-72 9-41 (234)
459 2we8_A Xanthine dehydrogenase; 88.5 0.57 1.9E-05 44.5 5.7 38 38-75 203-240 (386)
460 1wwk_A Phosphoglycerate dehydr 88.5 0.54 1.8E-05 43.1 5.4 35 38-72 141-175 (307)
461 1yb1_A 17-beta-hydroxysteroid 88.5 1.4 4.8E-05 39.1 8.1 34 38-71 30-64 (272)
462 3r3s_A Oxidoreductase; structu 88.4 1.2 4.2E-05 40.1 7.7 53 38-97 48-101 (294)
463 2ekl_A D-3-phosphoglycerate de 88.4 0.56 1.9E-05 43.1 5.5 35 38-72 141-175 (313)
464 3don_A Shikimate dehydrogenase 88.4 0.42 1.4E-05 43.2 4.5 48 26-73 100-152 (277)
465 2d0i_A Dehydrogenase; structur 88.4 0.47 1.6E-05 44.1 5.0 36 37-72 144-179 (333)
466 1edz_A 5,10-methylenetetrahydr 88.3 0.57 1.9E-05 43.3 5.4 50 22-71 150-210 (320)
467 3nrc_A Enoyl-[acyl-carrier-pro 88.3 0.45 1.5E-05 42.6 4.7 36 37-72 24-62 (280)
468 4da9_A Short-chain dehydrogena 88.3 1.5 5.2E-05 39.2 8.3 51 38-96 28-79 (280)
469 3hg7_A D-isomer specific 2-hyd 88.3 0.44 1.5E-05 44.2 4.6 36 38-73 139-174 (324)
470 2egg_A AROE, shikimate 5-dehyd 88.2 0.47 1.6E-05 43.3 4.8 34 38-71 140-174 (297)
471 2pv7_A T-protein [includes: ch 88.2 0.47 1.6E-05 43.2 4.8 33 40-72 22-55 (298)
472 3un1_A Probable oxidoreductase 88.2 1.2 4.1E-05 39.4 7.5 37 38-74 27-64 (260)
473 3oec_A Carveol dehydrogenase ( 88.2 1.4 4.9E-05 40.1 8.2 61 37-97 44-108 (317)
474 3fbt_A Chorismate mutase and s 88.2 0.76 2.6E-05 41.6 6.1 47 26-72 105-156 (282)
475 1gpe_A Protein (glucose oxidas 88.2 0.42 1.4E-05 48.0 4.9 35 40-74 25-60 (587)
476 3sc6_A DTDP-4-dehydrorhamnose 88.2 0.3 1E-05 43.6 3.4 31 41-71 7-38 (287)
477 4dll_A 2-hydroxy-3-oxopropiona 88.2 0.31 1.1E-05 44.8 3.6 34 39-72 31-64 (320)
478 1jnr_A Adenylylsulfate reducta 88.2 0.32 1.1E-05 49.3 4.0 56 82-137 152-216 (643)
479 3t4e_A Quinate/shikimate dehyd 88.2 0.95 3.3E-05 41.6 6.8 47 26-72 131-182 (312)
480 2pd4_A Enoyl-[acyl-carrier-pro 88.1 0.5 1.7E-05 42.2 4.9 35 38-72 5-42 (275)
481 3k96_A Glycerol-3-phosphate de 88.1 0.38 1.3E-05 45.1 4.2 34 39-72 29-62 (356)
482 1qo8_A Flavocytochrome C3 fuma 88.1 0.22 7.4E-06 49.7 2.7 53 152-207 502-561 (566)
483 2jbv_A Choline oxidase; alcoho 88.1 0.38 1.3E-05 47.8 4.4 34 40-73 14-48 (546)
484 1rpn_A GDP-mannose 4,6-dehydra 88.1 0.54 1.8E-05 42.9 5.2 36 38-73 13-49 (335)
485 1a4i_A Methylenetetrahydrofola 88.1 0.48 1.7E-05 43.2 4.7 35 37-71 163-198 (301)
486 2ae2_A Protein (tropinone redu 88.0 1.9 6.4E-05 37.9 8.6 34 38-71 8-42 (260)
487 3osu_A 3-oxoacyl-[acyl-carrier 88.0 1.2 4.2E-05 38.8 7.3 52 38-97 3-55 (246)
488 2h78_A Hibadh, 3-hydroxyisobut 88.0 0.31 1E-05 44.3 3.4 33 40-72 4-36 (302)
489 2jah_A Clavulanic acid dehydro 88.0 1.7 5.7E-05 38.0 8.2 34 38-71 6-40 (247)
490 1o5i_A 3-oxoacyl-(acyl carrier 88.0 0.64 2.2E-05 40.8 5.4 36 37-72 17-53 (249)
491 2cuk_A Glycerate dehydrogenase 88.0 0.61 2.1E-05 42.8 5.4 36 38-73 143-178 (311)
492 2bka_A CC3, TAT-interacting pr 88.0 0.51 1.8E-05 40.8 4.7 37 38-74 17-56 (242)
493 1leh_A Leucine dehydrogenase; 88.0 0.55 1.9E-05 44.2 5.2 35 36-70 170-204 (364)
494 1dhr_A Dihydropteridine reduct 88.0 0.61 2.1E-05 40.6 5.2 36 38-73 6-42 (241)
495 1n2s_A DTDP-4-, DTDP-glucose o 87.9 0.49 1.7E-05 42.4 4.7 33 41-74 2-35 (299)
496 3gaf_A 7-alpha-hydroxysteroid 87.9 1.1 3.9E-05 39.4 7.0 50 38-96 11-61 (256)
497 2uyy_A N-PAC protein; long-cha 87.8 0.5 1.7E-05 43.1 4.8 34 40-73 31-64 (316)
498 3dqp_A Oxidoreductase YLBE; al 87.8 0.45 1.5E-05 40.6 4.2 36 41-76 2-38 (219)
499 3p2o_A Bifunctional protein fo 87.8 0.62 2.1E-05 42.2 5.2 35 37-71 158-193 (285)
500 4fn4_A Short chain dehydrogena 87.8 1.6 5.6E-05 38.7 8.0 52 38-98 6-58 (254)
No 1
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=1.9e-48 Score=383.96 Aligned_cols=301 Identities=17% Similarity=0.287 Sum_probs=259.2
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|+.+++|| ++++++++++|+..+++.+....+++++|||||++|+|+|..|+++|.+||++++.+++++. +|+++
T Consensus 115 ~p~~p~i~g---~~~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~-~d~~~ 190 (437)
T 4eqs_A 115 SANSLGFES---DITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL-MDADM 190 (437)
T ss_dssp EECCCCCCC---TTEECCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT-SCGGG
T ss_pred ccccccccC---ceEEeeccHHHHHHHHHhhhccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc-ccchh
Confidence 466666666 57999999999999999887667899999999999999999999999999999999999987 89999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchhhhcc-ccc-ccCcEEEeccc
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTL-EKGGIKVTGRL 161 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-l~~-~~g~I~vd~~l 161 (356)
++.+.+.|+++||++++++++++++. ..+.+++|+++++|.|++++|++||+++++.. +.. ++|+|.||++|
T Consensus 191 ~~~~~~~l~~~gV~i~~~~~v~~~~~------~~v~~~~g~~~~~D~vl~a~G~~Pn~~~~~~~gl~~~~~G~I~vd~~~ 264 (437)
T 4eqs_A 191 NQPILDELDKREIPYRLNEEINAING------NEITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKF 264 (437)
T ss_dssp GHHHHHHHHHTTCCEEESCCEEEEET------TEEEETTSCEEECSEEEECCCEEESCGGGTTSSCCCCTTSCEECCTTC
T ss_pred HHHHHHHhhccceEEEeccEEEEecC------CeeeecCCeEEeeeeEEEEeceecCcHHHHhhhhhhccCCcEecCCCc
Confidence 99999999999999999999999864 14778999999999999999999999988765 666 67889999999
Q ss_pred ccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccceEE-
Q 018416 162 QSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEVV- 240 (356)
Q Consensus 162 ~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~~- 240 (356)
|||+|+|||+|||+..++..++.+.+.+++..|.+||+.+|+||+|.......+.++..+..++++.++++|+++.++.
T Consensus 265 ~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~~~~~~~~~~~~~~~~~~~p~ia~vGlte~~a~~ 344 (437)
T 4eqs_A 265 ETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQ 344 (437)
T ss_dssp BCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSCTTCCCCCBCCCEEEEETTEEEEEEESCGGGGGG
T ss_pred cCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcCCCCcccccceeEEeeeeccceEEEeeCCHHHHHh
Confidence 9999999999999999998888888889999999999999999999765334456777788899999999999886531
Q ss_pred ------E--EccC------CCCceEEEEe--eCCeEEEEEEeCCC-HH-HHHHHHHHHHcCCCcCcHHHHhhcCCCcccC
Q 018416 241 ------H--YGNF------SGTTFGAYWV--NKGRLVGSFLEGGT-KE-EYEAIAKATRLQPVVEDLAELETQGLGFALA 302 (356)
Q Consensus 241 ------~--~g~~------~~~~~~~~~~--~~g~ilGa~~vg~~-~~-~~~~~a~ai~~~~~~~dl~~l~~~~~~yap~ 302 (356)
. .... +..+|.|+.. ++++|||+|++|++ +. .++.++.||++++|++||.+++ ++|+|+
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~g~~Kli~d~~~~~ilGa~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~---~~yhP~ 421 (437)
T 4eqs_A 345 FDYKMVEVTQGAHANYYPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFE---VAFAPP 421 (437)
T ss_dssp SCEEEEEEEEESSCTTSSSCCEEEEEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCC---CCCCTT
T ss_pred CCceEEEEecCCchhhcCCCCcEEEEEEEECCCCEEEEEEEECcCCHHHHHHHHHHHHHcCCcHHHHhcCc---cccCCC
Confidence 1 1111 1123666554 68999999999975 55 4678999999999999999999 999999
Q ss_pred cCCCCCCCCcccccc
Q 018416 303 VSQKPLPSTPVDGKT 317 (356)
Q Consensus 303 ~~~~~~~~~~~~~~~ 317 (356)
|+++.+++++.+++|
T Consensus 422 ~s~~~d~v~~aa~~A 436 (437)
T 4eqs_A 422 YSHPKDLINMIGYKA 436 (437)
T ss_dssp TCCSSCHHHHHHHTT
T ss_pred CCchHHHHHHHHHhc
Confidence 999999888877653
No 2
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=3.5e-46 Score=371.03 Aligned_cols=317 Identities=21% Similarity=0.249 Sum_probs=262.2
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHC-CCcEEEEeeCCccCCccCCHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVIN-KINVTMVFPEAHCMARLFTPK 82 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~-G~~Vtlv~~~~~~l~~~~d~~ 82 (356)
+|..+++||.+.++++++++..++..+++.+....+++++|||+|++|+|+|..|++. |.+||++++.++++++.++++
T Consensus 124 ~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~ 203 (472)
T 3iwa_A 124 KANRPPVEGMDLAGVTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKS 203 (472)
T ss_dssp EECCCSCTTTTSBTEEECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHH
T ss_pred CcCCCCCCCCCCCCEEEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHH
Confidence 5778899999889999999999999998887654689999999999999999999999 999999999999999559999
Q ss_pred HHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchhhhcc-ccc-ccCcEEEecc
Q 018416 83 IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTL-EKGGIKVTGR 160 (356)
Q Consensus 83 ~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-l~~-~~g~I~vd~~ 160 (356)
+.+.+.+.+++.||++++++++++++. +++.+. +.+.+|+++++|.||+|+|++|++++++.. +.. ++|+|.||++
T Consensus 204 ~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~-v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~~g~i~vd~~ 281 (472)
T 3iwa_A 204 LSQMLRHDLEKNDVVVHTGEKVVRLEG-ENGKVA-RVITDKRTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTR 281 (472)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEE-EEEESSCEEECSEEEECSCEEECCHHHHHHTCCBCTTCCEECCTT
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEc-cCCeEE-EEEeCCCEEEcCEEEECCCCCcCHHHHHhCCccCCCCCCEEECCC
Confidence 999999999999999999999999987 355543 778889999999999999999999987653 665 5789999999
Q ss_pred cccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccceEE
Q 018416 161 LQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEVV 240 (356)
Q Consensus 161 l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~~ 240 (356)
+||+.|+|||+|||+..+...+|.+.+.+++..|.+||+.||+||+|... .....+|++++.+|++.++++|+++.++.
T Consensus 282 ~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~-~~~~~~~~~~~~~~~~~~a~vG~~e~~a~ 360 (472)
T 3iwa_A 282 MRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADGDA-TFPGAVGSWAVKLFEGSASGAGLTVEGAL 360 (472)
T ss_dssp CBCSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTTCCC-CCCCBCCCEEEECSSCEEEEEECCHHHHH
T ss_pred cccCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcCCCc-cCCCCCcceEEEECCceeEEEECCHHHHH
Confidence 99999999999999998887778777778899999999999999998764 24456788899999999999999875421
Q ss_pred ---------EEcc--------CCCCceEEEEe--eCCeEEEEEEeCC--C--HHHHHHHHHHHHcCCCcCcHHHHhhcCC
Q 018416 241 ---------HYGN--------FSGTTFGAYWV--NKGRLVGSFLEGG--T--KEEYEAIAKATRLQPVVEDLAELETQGL 297 (356)
Q Consensus 241 ---------~~g~--------~~~~~~~~~~~--~~g~ilGa~~vg~--~--~~~~~~~a~ai~~~~~~~dl~~l~~~~~ 297 (356)
.+.. .+..+|.|+.. ++|+|||+|++|+ + .+.++.++.||++++|++||.+++ +
T Consensus 361 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~~~~~~~~i~~~~~ai~~~~t~~~l~~~~---~ 437 (472)
T 3iwa_A 361 REGYDAVNVHVEQFDRAHFYPEKTIMTLQLVVDRPTRRVLGIQGFSTLGDALTARINAVATMLASKPTVEDISNAE---V 437 (472)
T ss_dssp HTTCCEEEEEEEC-----------CEEEEEEEETTTCBEEEEEEEESCHHHHHHHHHHHHHHHTTCCBHHHHHTCC---C
T ss_pred HcCCceEEEEEecCCccCccCCCceEEEEEEEECCCCEEEEEEEECCCcccHHHHHHHHHHHHHcCCCHHHHhccc---c
Confidence 1111 11124666665 6899999999998 2 345788999999999999999988 9
Q ss_pred CcccCcCCCCCCCCccccccccccccCcc
Q 018416 298 GFALAVSQKPLPSTPVDGKTVPGLVLGKS 326 (356)
Q Consensus 298 ~yap~~~~~~~~~~~~~~~~~n~~~~~~~ 326 (356)
.|+|+|+++.++.+..++.+.|.++|+.-
T Consensus 438 ~~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (472)
T 3iwa_A 438 VYSPPFASAMDIVNVAGNVADNVLAGREG 466 (472)
T ss_dssp C--------CCHHHHHHHHHHHHHC----
T ss_pred cCCCCCCCcccHHHHHHHHHHHhhcCccc
Confidence 99999999999999999999999999653
No 3
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=2.6e-45 Score=372.15 Aligned_cols=325 Identities=23% Similarity=0.317 Sum_probs=279.8
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|+.+++||.+.+++++++++.++..+.+.+....+++++|||+|++|+|+|..|++.|.+||++++.+++++. +++++
T Consensus 116 ~p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~ 194 (565)
T 3ntd_A 116 APIVPPIPGVDNPLTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTP-VDREM 194 (565)
T ss_dssp EECCCCCTTCCSTTEECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTT-SCHHH
T ss_pred CCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchh-cCHHH
Confidence 57888999999899999999999999988776667899999999999999999999999999999999999995 89999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEc------------------CCCcEEEEEeCCCcEEecCeEEEecCCCCCchhhh
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVD------------------SNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFE 145 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~------------------~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~ 145 (356)
.+.+.+.|+++||++++++.+++++.+ +++.+ .+.+.+|+++++|.||+|+|++|++++++
T Consensus 195 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~g~~i~~D~vi~a~G~~p~~~l~~ 273 (565)
T 3ntd_A 195 AGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHL-SLTLSNGELLETDLLIMAIGVRPETQLAR 273 (565)
T ss_dssp HHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEE-EEEETTSCEEEESEEEECSCEEECCHHHH
T ss_pred HHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcE-EEEEcCCCEEEcCEEEECcCCccchHHHH
Confidence 999999999999999999999999863 23433 46778899999999999999999999876
Q ss_pred cc-ccc-ccCcEEEecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCC-CCCeEEE
Q 018416 146 GQ-LTL-EKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFD-YLPFFYS 222 (356)
Q Consensus 146 ~~-l~~-~~g~I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~-~~p~~~~ 222 (356)
.. +.. ++|+|.||+++||+.|+|||+|||+..++..+|.+.+.+++..|..||+.||+||+|... .+. ..++.++
T Consensus 274 ~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~--~~~~~~~~~~~ 351 (565)
T 3ntd_A 274 DAGLAIGELGGIKVNAMMQTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFGREE--RYQGTQGTAIC 351 (565)
T ss_dssp HHTCCBCTTSSBCCCTTCBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCC--CCCCBCCCEEE
T ss_pred hCCcccCCCCCEEECCCcccCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcCCCc--cCCCcccceEE
Confidence 53 665 578999999999999999999999998887778777778999999999999999998763 343 3566778
Q ss_pred EecCceEEEeecccceEE---------EEccC--------CCCceEEEEe--eCCeEEEEEEeCCCH--HHHHHHHHHHH
Q 018416 223 RVFTLSWQFYGDNVGEVV---------HYGNF--------SGTTFGAYWV--NKGRLVGSFLEGGTK--EEYEAIAKATR 281 (356)
Q Consensus 223 ~~~~~~~~~~G~~~~~~~---------~~g~~--------~~~~~~~~~~--~~g~ilGa~~vg~~~--~~~~~~a~ai~ 281 (356)
.+|++.++++|+++.++. .+... ...+|.|+.. ++|+|||+|++|+++ +.++.++.||+
T Consensus 352 ~~~~~~~~~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~v~~~~~~~ilG~~~~g~~a~~e~i~~~~~ai~ 431 (565)
T 3ntd_A 352 KVFDLAVGATGKNEKQLKQAGIAFEKVYVHTASHASYYPGAEVVSFKLLFDPVKGTIFGAQAVGKDGIDKRIDVMAVAQR 431 (565)
T ss_dssp EETTEEEEEEECCHHHHHHTTCCCEEEEEEEESSCTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHH
T ss_pred EEcCcEEEEecCCHHHHHHcCCCeEEEEEecCcccCcCCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHH
Confidence 899999999999875421 11111 1123667666 689999999999886 45788999999
Q ss_pred cCCCcCcHHHHhhcCCCcccCcCCCCCCCCccccccccccccCccccchhhhhh
Q 018416 282 LQPVVEDLAELETQGLGFALAVSQKPLPSTPVDGKTVPGLVLGKSLYPLHATAG 335 (356)
Q Consensus 282 ~~~~~~dl~~l~~~~~~yap~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 335 (356)
+++|++||.+++ +.|+|+|++..++.+..++.+.|.+.+..+.|+++|+..
T Consensus 432 ~~~~~~~l~~~~---~~~~P~~~~~~~~i~~aa~~~~~~~~~~~~~i~~~~~~~ 482 (565)
T 3ntd_A 432 AGMTVEQLQHLE---LSYAPPYGSAKDVINQAAFVASNIIKGDATPIHFDQIDN 482 (565)
T ss_dssp TTCBHHHHTTCC---CCCCTTTCCSSCHHHHHHHHHHHHHHTSCCEECTTTTTS
T ss_pred cCCCHHHHhhhh---hccCcccCchhhhhhhhhhhhhhccccccceeeHHHHHh
Confidence 999999999988 999999999999999888888999999999999998865
No 4
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=1.1e-44 Score=369.72 Aligned_cols=325 Identities=24% Similarity=0.320 Sum_probs=281.3
Q ss_pred CCccCCCCCC-CCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHH
Q 018416 4 KLEEFGLSGS-DAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPK 82 (356)
Q Consensus 4 ~p~~~~ipG~-~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~ 82 (356)
+|..+++||. +.+++++.+++.++.+++..+....+++++|||+|++|+|+|..|++.|.+||++++.+++++. ++++
T Consensus 151 ~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~ 229 (588)
T 3ics_A 151 KPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP-IDYE 229 (588)
T ss_dssp EECCCCCTTTTTCTTEEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHH
T ss_pred CCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc-CCHH
Confidence 5778899998 7889999999999999988876557899999999999999999999999999999999999998 8999
Q ss_pred HHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchhhhcc-ccc-ccCcEEEecc
Q 018416 83 IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTL-EKGGIKVTGR 160 (356)
Q Consensus 83 ~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-l~~-~~g~I~vd~~ 160 (356)
+.+.+.+.|++.||++++++++++++.+ ++ .+.+.+|+++++|.||+|+|++|++++++.. +.. ++|+|.||++
T Consensus 230 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~---~v~~~~g~~i~~D~Vi~a~G~~p~~~~l~~~g~~~~~~g~i~vd~~ 305 (588)
T 3ics_A 230 MAAYVHEHMKNHDVELVFEDGVDALEEN-GA---VVRLKSGSVIQTDMLILAIGVQPESSLAKGAGLALGVRGTIKVNEK 305 (588)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEGG-GT---EEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBCGGGCBCCCTT
T ss_pred HHHHHHHHHHHcCCEEEECCeEEEEecC-CC---EEEECCCCEEEcCEEEEccCCCCChHHHHhcCceEcCCCCEEECCc
Confidence 9999999999999999999999999753 22 4677899999999999999999999987654 665 6789999999
Q ss_pred cccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcC-CCCCCCCCCCCeEEEEecCceEEEeecccceE
Q 018416 161 LQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME-PDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEV 239 (356)
Q Consensus 161 l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g-~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~ 239 (356)
+||+.|+|||+|||+..++..+|.+.+.+++..|..||+.||+||+| ... .....+|+.+..+|++.++++|+++.++
T Consensus 306 ~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~-~~~~~~~~~~~~~~~~~~a~vGlte~~a 384 (588)
T 3ics_A 306 FQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHGHTDS-LYKGTLGTSVAKVFDLTVATTGLNEKIL 384 (588)
T ss_dssp SBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCSS-CCCCBCCCEEEEETTEEEEEEECCHHHH
T ss_pred cccCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcCCCcc-ccCCcccceEEEECCeEEEEecCCHHHH
Confidence 99999999999999998877778777778999999999999999998 442 3445678888889999999999987542
Q ss_pred E---------EEc--cC------CCCceEEEEe--eCCeEEEEEEeCCC-H-HHHHHHHHHHHcCCCcCcHHHHhhcCCC
Q 018416 240 V---------HYG--NF------SGTTFGAYWV--NKGRLVGSFLEGGT-K-EEYEAIAKATRLQPVVEDLAELETQGLG 298 (356)
Q Consensus 240 ~---------~~g--~~------~~~~~~~~~~--~~g~ilGa~~vg~~-~-~~~~~~a~ai~~~~~~~dl~~l~~~~~~ 298 (356)
. .+. .. ...+|.|+.. ++|+|||+|++|+. + +.++.++.||++++|++||.+++ +.
T Consensus 385 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~~~~~~ilG~~~~g~~~~~e~i~~~~~ai~~~~t~~~l~~~~---~~ 461 (588)
T 3ics_A 385 KRLNIPYEVVHVQANSHAGYYPNATPVLIKLIFNKDSGKIYGAQTLGRDGVDKRMDVIATAIKANLTVLDLPDLE---LS 461 (588)
T ss_dssp HHTTCCCEEEEEEEESSCTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBTTTGGGCC---CC
T ss_pred HHcCCCeEEEEEecCCccccCCCCceEEEEEEEECCCCeEEEEEEEcCCcHHHHHHHHHHHHHcCCCHHHhhhhh---hc
Confidence 1 111 10 1123667665 68999999999974 4 45788999999999999999999 99
Q ss_pred cccCcCCCCCCCCccccccccccccCccccchhhhhhHH
Q 018416 299 FALAVSQKPLPSTPVDGKTVPGLVLGKSLYPLHATAGVI 337 (356)
Q Consensus 299 yap~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 337 (356)
|+|+|++.+++.+.+++.+.|.+.+..+.|+++|+.+..
T Consensus 462 ~~P~~~~~~d~i~~aa~~a~n~~~~~~~~i~~~~~~~~~ 500 (588)
T 3ics_A 462 YAPPYSSAKDPVNMVGYAASNIVDGFVDTVQWHEIDRIV 500 (588)
T ss_dssp CSTTTCCSSCHHHHHHHHHHHHHTTSCCEECTTTHHHHH
T ss_pred cCCCcccccchhhhcccccccccccccceecHHHHHHHh
Confidence 999999999999999888999999999999999987765
No 5
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.1e-43 Score=350.93 Aligned_cols=305 Identities=21% Similarity=0.233 Sum_probs=258.4
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|+.+++||.+.+++++.++.+++..+++.+....+++++|||+|++|+|+|..|++.|.+||++++.+++++..+|+++
T Consensus 113 ~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~ 192 (449)
T 3kd9_A 113 SPQVPAIEGVNLKGVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEV 192 (449)
T ss_dssp EECCCSCBTTTSTTEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHH
T ss_pred CCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHH
Confidence 57788999999899999999999999998886556899999999999999999999999999999999999987689999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchhhhcc-ccc-ccCcEEEeccc
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTL-EKGGIKVTGRL 161 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-l~~-~~g~I~vd~~l 161 (356)
.+.+.+.|++. |++++++.+++++.+ +.+..+ +.+++++++|.|++|+|++|++++++.. +.. ++|+|.||+++
T Consensus 193 ~~~l~~~l~~~-v~i~~~~~v~~i~~~--~~v~~v-~~~g~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~~G~i~vd~~~ 268 (449)
T 3kd9_A 193 TDILEEKLKKH-VNLRLQEITMKIEGE--ERVEKV-VTDAGEYKAELVILATGIKPNIELAKQLGVRIGETGAIWTNEKM 268 (449)
T ss_dssp HHHHHHHHTTT-SEEEESCCEEEEECS--SSCCEE-EETTEEEECSEEEECSCEEECCHHHHHTTCCBCTTSSBCCCTTC
T ss_pred HHHHHHHHHhC-cEEEeCCeEEEEecc--CcEEEE-EeCCCEEECCEEEEeeCCccCHHHHHhCCccCCCCCCEEECCCC
Confidence 99999999999 999999999999853 233333 4577899999999999999999987654 666 57889999999
Q ss_pred ccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccceEE-
Q 018416 162 QSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEVV- 240 (356)
Q Consensus 162 ~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~~- 240 (356)
||+.|+|||+|||+..++..+|.+.+.+++..|..||+.+|.||+|... ......|++++.++++.++++|+++.++.
T Consensus 269 ~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g~~~-~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~ 347 (449)
T 3kd9_A 269 QTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGKEL-HFPGVLGTAVTKFMDVEIGKTGLTEMEALK 347 (449)
T ss_dssp BCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCC-CCCCBCCCEEEEETTEEEEEEECCHHHHHH
T ss_pred ccCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcCCCc-cCCCcccceEEEEcCcEEEEecCCHHHHHH
Confidence 9999999999999998887778777778999999999999999998753 23345688899999999999999875421
Q ss_pred --------EEc--c------CCCCceEEEEe--eCCeEEEEEEeCCCHH-HHHHHHHHHHcCCCcCcHHHHhhcCCCccc
Q 018416 241 --------HYG--N------FSGTTFGAYWV--NKGRLVGSFLEGGTKE-EYEAIAKATRLQPVVEDLAELETQGLGFAL 301 (356)
Q Consensus 241 --------~~g--~------~~~~~~~~~~~--~~g~ilGa~~vg~~~~-~~~~~a~ai~~~~~~~dl~~l~~~~~~yap 301 (356)
.+. . ....+|.|+.. ++|+|||+|++|+.+. .++.++.||++++|++||.+++ +.|+|
T Consensus 348 ~g~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~---~~~~p 424 (449)
T 3kd9_A 348 EGYDVRTAFIKASTRPHYYPGGREIWLKGVVDNETNRLLGVQVVGSDILPRIDTAAAMLMAGFTTKDAFFTD---LAYAP 424 (449)
T ss_dssp TTCCEEEEEEEEESSCTTSTTCCEEEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTTCBHHHHHTCC---CCCBT
T ss_pred CCCceEEEEEecCCccccCCCCceEEEEEEEECCCCEEEEEEEEChHHHHHHHHHHHHHHcCCcHHHHhhcc---cccCC
Confidence 111 0 11123777665 4699999999998755 4678999999999999999988 99999
Q ss_pred CcCCCCCCCCccccc
Q 018416 302 AVSQKPLPSTPVDGK 316 (356)
Q Consensus 302 ~~~~~~~~~~~~~~~ 316 (356)
+|++..++.+..++.
T Consensus 425 ~~~~~~~~~~~~~~~ 439 (449)
T 3kd9_A 425 PFAPVWDPLIVLARV 439 (449)
T ss_dssp TTBCSSCHHHHHHHH
T ss_pred CCCCchhHHHHHHHH
Confidence 999999888776643
No 6
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=1.5e-43 Score=350.20 Aligned_cols=310 Identities=18% Similarity=0.293 Sum_probs=257.6
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|+.+++||.+.++++++++++++.++.+.+. .+++++|||+|++|+|+|..|+++|.+||++++.++++++.+++++
T Consensus 116 ~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~--~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~ 193 (452)
T 2cdu_A 116 KPTVPPIPGIDSSRVYLCKNYNDAKKLFEEAP--KAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEF 193 (452)
T ss_dssp EECCCCCTTTTSTTEEECSSHHHHHHHHHHGG--GCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHH
T ss_pred CcCCCCCCCCCCCCEEEeCcHHHHHHHHHHhc--cCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhH
Confidence 57778899998889999999999999988775 5899999999999999999999999999999999999996699999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchhhhccccc-ccCcEEEecccc
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQLTL-EKGGIKVTGRLQ 162 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~l~~-~~g~I~vd~~l~ 162 (356)
.+.+.+.|+++||++++++++++++. +++.+..+.+ +|+++++|.|++|+|++|++++++..+.. ++|+|.||++||
T Consensus 194 ~~~l~~~l~~~Gv~i~~~~~v~~i~~-~~~~v~~v~~-~g~~i~~D~vv~a~G~~p~~~ll~~~l~~~~~G~i~Vd~~~~ 271 (452)
T 2cdu_A 194 TDILAKDYEAHGVNLVLGSKVAAFEE-VDDEIITKTL-DGKEIKSDIAILCIGFRPNTELLKGKVAMLDNGAIITDEYMH 271 (452)
T ss_dssp HHHHHHHHHHTTCEEEESSCEEEEEE-ETTEEEEEET-TSCEEEESEEEECCCEEECCGGGTTTSCBCTTSCBCCCTTSB
T ss_pred HHHHHHHHHHCCCEEEcCCeeEEEEc-CCCeEEEEEe-CCCEEECCEEEECcCCCCCHHHHHHhhhcCCCCCEEECCCcC
Confidence 99999999999999999999999986 3555544554 78899999999999999999987765555 568899999999
Q ss_pred cCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccceEE--
Q 018416 163 SSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEVV-- 240 (356)
Q Consensus 163 ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~~-- 240 (356)
|+.|+|||+|||+..+...+|.+.+++++..|.+||+.||.||++... ......|++++.+|++.++++|.++.++.
T Consensus 272 t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~-~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~ 350 (452)
T 2cdu_A 272 SSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTEDKV-KDMGTQSSSGLKLYGRTYVSTGINTALAKAN 350 (452)
T ss_dssp CSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSSCCC-CCCCBCCCEEEEETTEEEEEEECCHHHHHHT
T ss_pred cCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCCCCC-cCCCccceEEEEECCeeeEeecCCHHHHHHc
Confidence 999999999999998776667666678999999999999999998642 23345678889999999999998864321
Q ss_pred -------EEcc--------CCCCceEEEEe--eCCeEEEEEEeCC-CHH-HHHHHHHHHHcCCCcCcHHHHhhcCCCccc
Q 018416 241 -------HYGN--------FSGTTFGAYWV--NKGRLVGSFLEGG-TKE-EYEAIAKATRLQPVVEDLAELETQGLGFAL 301 (356)
Q Consensus 241 -------~~g~--------~~~~~~~~~~~--~~g~ilGa~~vg~-~~~-~~~~~a~ai~~~~~~~dl~~l~~~~~~yap 301 (356)
.+.+ ....+|.++.. ++|+|+|+|++|+ .+. .++.++.+|++++|++||.+++ +.|+|
T Consensus 351 g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~i~~~~~ai~~~~~~~~l~~~~---~~~~P 427 (452)
T 2cdu_A 351 NLKVSEVIIADNYRPEFMLSTDEVLMSLVYDPKTRVILGGALSSMHDVSQSANVLSVCIQNKNTIDDLAMVD---MLFQP 427 (452)
T ss_dssp TCCCEEEEEEEESSCTTBSCCCEEEEEEEECTTTCBEEEEEEEESSCCHHHHHHHHHHHHTTCBHHHHHHSC---CCCCT
T ss_pred CCceEEEEEecCCccccCCCCceEEEEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhhh---hccCC
Confidence 1111 01123666655 4799999999998 554 4678899999999999998776 78999
Q ss_pred CcCCCCCCCCcccccccccc
Q 018416 302 AVSQKPLPSTPVDGKTVPGL 321 (356)
Q Consensus 302 ~~~~~~~~~~~~~~~~~n~~ 321 (356)
+|++...+.+..++.+.|.+
T Consensus 428 t~~e~~~~~~~aa~~~~~~~ 447 (452)
T 2cdu_A 428 QFDRPFNYLNILGQAAQAQA 447 (452)
T ss_dssp TTCCSSCHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHhh
Confidence 99998776666665544443
No 7
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=9.5e-44 Score=351.73 Aligned_cols=306 Identities=16% Similarity=0.178 Sum_probs=253.8
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|..+++||.+.+++++.++++++..+.+... .+++++|||+|++|+|+|..|++.|.+||++++.++++++.+|+++
T Consensus 114 ~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~--~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~ 191 (452)
T 3oc4_A 114 SQFSTQIRGSQTEKLLKYKFLSGALAAVPLLE--NSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEM 191 (452)
T ss_dssp CBCCCCCBTTTCTTEEEGGGCC----CCHHHH--TCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHH
T ss_pred ccCCCCCCCCCCCCEEEeCCHHHHHHHHHHHh--cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccccCCHHH
Confidence 57888999999899999999988888777665 5899999999999999999999999999999999999987689999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchhhhccccc-ccCcEEEecccc
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQLTL-EKGGIKVTGRLQ 162 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~l~~-~~g~I~vd~~l~ 162 (356)
.+.+.+.|+++||++++++++++++. +++.+ .+.++++ ++++|.|++|+|++|++++++..+.. ++|+|.||++||
T Consensus 192 ~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v-~v~~~~g-~i~aD~Vv~A~G~~p~~~~l~~~~~~~~~g~i~vd~~~~ 268 (452)
T 3oc4_A 192 VAEVQKSLEKQAVIFHFEETVLGIEE-TANGI-VLETSEQ-EISCDSGIFALNLHPQLAYLDKKIQRNLDQTIAVDAYLQ 268 (452)
T ss_dssp HHHHHHHHHTTTEEEEETCCEEEEEE-CSSCE-EEEESSC-EEEESEEEECSCCBCCCSSCCTTSCBCTTSCBCCCTTCB
T ss_pred HHHHHHHHHHcCCEEEeCCEEEEEEc-cCCeE-EEEECCC-EEEeCEEEECcCCCCChHHHHhhhccCCCCCEEECcCcc
Confidence 99999999999999999999999986 34555 6777776 89999999999999999988765555 678999999999
Q ss_pred cCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccceEE--
Q 018416 163 SSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEVV-- 240 (356)
Q Consensus 163 ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~~-- 240 (356)
|+.|+|||+|||+..+...+|.+.+.+++..|..||+.||.||++.... .....++..+.+|+..++++|+++.++.
T Consensus 269 t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~-~~~~~~~~~~~~~~~~~a~vG~te~~a~~~ 347 (452)
T 3oc4_A 269 TSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEKTHR-FIGSLRTMGTKVGDYYLASTGLTETEGLFF 347 (452)
T ss_dssp CSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSSSCCCC-CCCCCCCEEEEETTEEEEEEECCSGGGGGS
T ss_pred CCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhcCCCcc-CCCccccEEEEEcCeeEEEecCCHHHHHHC
Confidence 9999999999999987766677666788999999999999999986531 2223456677889999999999876432
Q ss_pred -------EEcc------CCCCceEEEEe--eCCeEEEEEEeCC-CH-HHHHHHHHHHHcCCCcCcHHHHhhcCCCcccCc
Q 018416 241 -------HYGN------FSGTTFGAYWV--NKGRLVGSFLEGG-TK-EEYEAIAKATRLQPVVEDLAELETQGLGFALAV 303 (356)
Q Consensus 241 -------~~g~------~~~~~~~~~~~--~~g~ilGa~~vg~-~~-~~~~~~a~ai~~~~~~~dl~~l~~~~~~yap~~ 303 (356)
.+.. .+..+|.|+.. ++|+|||+|++|+ .+ +.++.++.||++++|++||.+++ +.|+|+|
T Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~---~~~~P~~ 424 (452)
T 3oc4_A 348 PQTLASIIVRQPAPPLQHGTEILGKLIYDKVTQRVLGAQLCSKNNCLEKINTLALSIQTGQTLTDLLQKD---YFYQPSL 424 (452)
T ss_dssp SSCEEEEEEEEECTTTTCSCEEEEEEEEETTTCBEEEEEEEESSCCTHHHHHHHHHHHTTCBHHHHHTCC---CCCCTTT
T ss_pred CCceEEEEEecCCccCCCCCeEEEEEEEECCCCEEEEEEEEeCCCHHHHHHHHHHHHHcCCCHHHHHhhH---hccCCCC
Confidence 1111 01234777665 5699999999998 44 45688999999999999999887 8999999
Q ss_pred CCCCCCCCccccccc
Q 018416 304 SQKPLPSTPVDGKTV 318 (356)
Q Consensus 304 ~~~~~~~~~~~~~~~ 318 (356)
+++.++.+..+..+.
T Consensus 425 ~~~~~~~~~a~~~~~ 439 (452)
T 3oc4_A 425 TNIYDITNLMGASAY 439 (452)
T ss_dssp SCSSCHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHH
Confidence 999888887765443
No 8
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=5.4e-43 Score=349.80 Aligned_cols=308 Identities=19% Similarity=0.238 Sum_probs=254.8
Q ss_pred CCccCCCCCCC-----------CCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 4 KLEEFGLSGSD-----------AENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 4 ~p~~~~ipG~~-----------~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
+|..+++||.+ .++++++++++++.++.+.+....+++++|||+|++|+|+|..|+++|.+||++++.+
T Consensus 148 ~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 227 (490)
T 2bc0_A 148 QPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVD 227 (490)
T ss_dssp EECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CcCCCCCCCccccccccccccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEccc
Confidence 57778899987 6899999999999999888743468999999999999999999999999999999999
Q ss_pred ccCCccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchhhhccccc-c
Q 018416 73 HCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQLTL-E 151 (356)
Q Consensus 73 ~~l~~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~l~~-~ 151 (356)
+++++.+|+++.+.+.+.|++.||++++++++++++. ++.+..+.+ +|+++++|.||+|+|++|++++++..+.. +
T Consensus 228 ~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ll~~~l~~~~ 304 (490)
T 2bc0_A 228 TCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAG--NGKVEKIIT-DKNEYDVDMVILAVGFRPNTTLGNGKIDLFR 304 (490)
T ss_dssp STTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEEEEC--SSSCCEEEE-SSCEEECSEEEECCCEEECCGGGTTCSCBCT
T ss_pred chhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEc--CCcEEEEEE-CCcEEECCEEEECCCCCcChHHHHhhhccCC
Confidence 9998669999999999999999999999999999985 444434555 67899999999999999999987766555 5
Q ss_pred cCcEEEecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEE
Q 018416 152 KGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQF 231 (356)
Q Consensus 152 ~g~I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~ 231 (356)
+|+|.||++|||+.|+|||+|||+..+...+|.+.+++++..|.+||+.||.||++... ......|++++.+|++.+++
T Consensus 305 ~G~I~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~-~~~~~~~~~~~~~~~~~~~~ 383 (490)
T 2bc0_A 305 NGAFLVNKRQETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTDL-EGIGVQGSNGISIYGLHMVS 383 (490)
T ss_dssp TSCBCCCTTCBCSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTTCCC-CCCCBCCCEEEEETTEEEEE
T ss_pred CCCEEECCCcccCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcCCCC-CCCCcccceEEEECCcEeEE
Confidence 78899999999999999999999998766666666678899999999999999998642 23345677888999999999
Q ss_pred eecccceEE------E---Ec---c----C--CCCceEEEEe--eCCeEEEEEEeCC-CH-HHHHHHHHHHHcCCCcCcH
Q 018416 232 YGDNVGEVV------H---YG---N----F--SGTTFGAYWV--NKGRLVGSFLEGG-TK-EEYEAIAKATRLQPVVEDL 289 (356)
Q Consensus 232 ~G~~~~~~~------~---~g---~----~--~~~~~~~~~~--~~g~ilGa~~vg~-~~-~~~~~~a~ai~~~~~~~dl 289 (356)
+|.++.++. . +. . . ...+|.++.. ++|+|+|++++|+ .+ +.++.++.||++++|++||
T Consensus 384 vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l 463 (490)
T 2bc0_A 384 TGLTLEKAKRLGFDAAVTEYTDNQKPEFIEHGNFPVTIKIVYDKDSRRILGAQMAAREDVSMGIHMFSLAIQEGVTIEKL 463 (490)
T ss_dssp EECCHHHHHHTTCCEEEEEEEEESSCTTCCSSCCEEEEEEEEETTTCBEEEEEEEESSCCTTHHHHHHHHHHHTCBHHHH
T ss_pred eeCCHHHHHHcCCceEEEEEecCCcccccCCCCceEEEEEEEECCCCEEEEEEEEcCcCHHHHHHHHHHHHHcCCCHHHH
Confidence 998764321 1 11 1 1 1123666655 5799999999998 54 4568899999999999999
Q ss_pred HHHhhcCCCcccCcCCCCCCCCccccccc
Q 018416 290 AELETQGLGFALAVSQKPLPSTPVDGKTV 318 (356)
Q Consensus 290 ~~l~~~~~~yap~~~~~~~~~~~~~~~~~ 318 (356)
.+++ +.|+|+|+++.++.+..++.+.
T Consensus 464 ~~~~---~~~~Pt~~e~~~~~~~~~~~~~ 489 (490)
T 2bc0_A 464 ALTD---IFFLPHFNKPYNYITMAALGAK 489 (490)
T ss_dssp HHSC---CCCCTTTCCTTCHHHHHHHTCC
T ss_pred hhcc---eecCCCCCchhHHHHHHHHHhh
Confidence 8876 7999999999777666654443
No 9
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=2e-41 Score=331.42 Aligned_cols=286 Identities=28% Similarity=0.448 Sum_probs=254.1
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCC-CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCS-GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPK 82 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~-~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~ 82 (356)
+|+.+++||.+.++++++++.+|+.++++.+. . +++++|||+|++|+|+|..|++.|.+||++++.++++++.++++
T Consensus 118 ~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~--~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~ 195 (415)
T 3lxd_A 118 DPRRLSCVGADLAGVHAVRTKEDADRLMAELD--AGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEA 195 (415)
T ss_dssp ECCCCBTTSSCCBTEECCCSHHHHHHHHHHHH--TTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHH
T ss_pred ccCCCCCCCccccCEEEEcCHHHHHHHHHHhh--hcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHH
Confidence 57888999999899999999999999998876 4 79999999999999999999999999999999999999878999
Q ss_pred HHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchhhhcc-cccccCcEEEeccc
Q 018416 83 IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTLEKGGIKVTGRL 161 (356)
Q Consensus 83 ~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-l~~~~g~I~vd~~l 161 (356)
+.+.+.+.++++||++++++.+++++. +++.+..+++++|+++++|.||+++|.+|++++++.. +..+ ++|.||+++
T Consensus 196 ~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~gi~vd~~~ 273 (415)
T 3lxd_A 196 LSEFYQAEHRAHGVDLRTGAAMDCIEG-DGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGALISAGASGG-NGVDVDEFC 273 (415)
T ss_dssp HHHHHHHHHHHTTCEEEETCCEEEEEE-SSSBEEEEEESSSCEEECSEEEECSCCEESCHHHHHTTCCCS-SSEECCTTC
T ss_pred HHHHHHHHHHhCCCEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEEECCCCccChHHHHhCCCCcC-CCEEECCCC
Confidence 999999999999999999999999987 5677778999999999999999999999999987654 5555 459999999
Q ss_pred ccCCCCEEEEccccccCcccc-CcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccc--e
Q 018416 162 QSSNSSVYAVGDVAAFPLKLL-GETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVG--E 238 (356)
Q Consensus 162 ~ts~~~VyAiGD~~~~~~~~~-g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~--~ 238 (356)
+|+.|+|||+|||+..+...+ |.+.+++++..|..||+.||.||+|.. ..+..+|+||+++|++.++++|.+.+ +
T Consensus 274 ~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~--~~~~~~p~~~~~~~~~~~~~~G~~~~~~~ 351 (415)
T 3lxd_A 274 RTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGAP--VPYKATPWFWSNQYDLKLQTVGLSTGHDN 351 (415)
T ss_dssp BCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTCC--CCCCCCCEEEEEETTEEEEEEECCTTCSE
T ss_pred CcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCCC--CCCCCCCeeEeeeCCcEEEEEeCCCCCCE
Confidence 999999999999999988777 888889999999999999999999876 47888999999999999999998653 5
Q ss_pred EEEEccCCCCceEEEEeeCCeEEEEEEeCCCHHHHHHHHHHHHcCCCcCcHHHHhhcCC
Q 018416 239 VVHYGNFSGTTFGAYWVNKGRLVGSFLEGGTKEEYEAIAKATRLQPVVEDLAELETQGL 297 (356)
Q Consensus 239 ~~~~g~~~~~~~~~~~~~~g~ilGa~~vg~~~~~~~~~a~ai~~~~~~~dl~~l~~~~~ 297 (356)
.+..++.....|.++++++|+|+|+.++|. ......+..+|+.+.+++ ..+|.+|.+
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~-~~~l~~~~~ 408 (415)
T 3lxd_A 352 AVLRGDPATRSFSVVYLKGGKVVALDCVNM-VKDYVQGKKLVEARAQIA-PEQLADAGV 408 (415)
T ss_dssp EEEEEEGGGTEEEEEEEETTEEEEEEEESC-HHHHHHHHHHHHHTCCCC-HHHHTCTTS
T ss_pred EEEEecCCCCeEEEEEEECCEEEEEEEECC-hHHHHHHHHHHHCCCCCC-HHHhcCCCC
Confidence 666777666679999999999999999994 666777888999998875 556664444
No 10
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=3.5e-41 Score=328.64 Aligned_cols=286 Identities=29% Similarity=0.437 Sum_probs=254.0
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|+.+++||.+.++++++++++++..+++.+. .+++++|||+|++|+|+|..|.+.|.+||++++.++++++.+++++
T Consensus 109 ~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~--~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~ 186 (404)
T 3fg2_P 109 RNRMLDVPNASLPDVLYLRTLDESEVLRQRMP--DKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEI 186 (404)
T ss_dssp EECCCCSTTTTSTTEECCSSHHHHHHHHHHGG--GCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHH
T ss_pred CccCCCCCCCCCCcEEEECCHHHHHHHHHHhh--cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHH
Confidence 57788999998899999999999999998886 5799999999999999999999999999999999999998789999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchhhhcc-cccccCcEEEecccc
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTLEKGGIKVTGRLQ 162 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-l~~~~g~I~vd~~l~ 162 (356)
.+.+.+.++++||++++++.+++++. +++.+..+++++|+++++|.||+|+|.+|++++++.. +..++ +|.||++++
T Consensus 187 ~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~-Gi~vd~~~~ 264 (404)
T 3fg2_P 187 SSYFHDRHSGAGIRMHYGVRATEIAA-EGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAAGLPTAA-GIIVDQQLL 264 (404)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBSS-SEEECTTSB
T ss_pred HHHHHHHHHhCCcEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHhCCCCCCC-CEEECCCcc
Confidence 99999999999999999999999987 4567778999999999999999999999999988654 55554 499999999
Q ss_pred cCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeeccc--ceEE
Q 018416 163 SSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNV--GEVV 240 (356)
Q Consensus 163 ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~--~~~~ 240 (356)
|+.|+|||+|||+..+.+.+|.+.+++++..|..||+.||.||+|.. .++..+|+||+++|++.++++|.+. .+.+
T Consensus 265 t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~--~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~ 342 (404)
T 3fg2_P 265 TSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTGDA--KPYDGYPWFWSDQGDDKLQIVGLTAGFDQVV 342 (404)
T ss_dssp CSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTCC--CCCCCCCEEEEEETTEEEEEEECCTTCCEEE
T ss_pred cCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCCCC--CCCCCCCceEeEECCcEEEEEeCCCCCCEEE
Confidence 99999999999999988778888888999999999999999999876 5788899999999999999999865 3566
Q ss_pred EEccCCCCceEEEEeeCCeEEEEEEeCCCHHHHHHHHHHHHcCCCcCcHHHHhhcCC
Q 018416 241 HYGNFSGTTFGAYWVNKGRLVGSFLEGGTKEEYEAIAKATRLQPVVEDLAELETQGL 297 (356)
Q Consensus 241 ~~g~~~~~~~~~~~~~~g~ilGa~~vg~~~~~~~~~a~ai~~~~~~~dl~~l~~~~~ 297 (356)
..++.....|.++++++|+|+|+.++|. ......+..+|+.+.+++ ..+|.+|.+
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~-~~~l~~~~~ 397 (404)
T 3fg2_P 343 IRGSVAERSFSAFCYKAGKLIGIESVNR-AADHVFGRKILPLDKSVT-PEQAADLSF 397 (404)
T ss_dssp EEEETTTTEEEEEEEETTEEEEEEEESC-HHHHHHHHHHTTTTCCCC-HHHHHCTTS
T ss_pred EEecCCCCcEEEEEEECCEEEEEEEeCC-HHHHHHHHHHHHcCCCCC-HHHhcCCCC
Confidence 6777766679999999999999999994 667777888999888775 456654443
No 11
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=2.2e-41 Score=330.87 Aligned_cols=287 Identities=23% Similarity=0.345 Sum_probs=251.3
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|+.+++||.+.++++++++.+|+.++++.+. .+++++|||+|++|+|+|..|++.|.+||++++.++++++.+++++
T Consensus 110 ~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~~~--~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~ 187 (410)
T 3ef6_A 110 RARTMALPGSQLPGVVTLRTYGDVQVLRDSWT--SATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRI 187 (410)
T ss_dssp EECCCCCTTTTSTTEECCCSHHHHHHHHHHCC--TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHH
T ss_pred cccCCCCCCccccceEEeccHHHHHHHHHHhc--cCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhhcCHHH
Confidence 47788999999899999999999999988775 6899999999999999999999999999999999999987789999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchhhhcc-cccccCcEEEecccc
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTLEKGGIKVTGRLQ 162 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-l~~~~g~I~vd~~l~ 162 (356)
.+.+.+.++++||++++++.+++++. ++.+..+++++|+++++|.||+++|.+|++++++.. +..+ ++|.||++++
T Consensus 188 ~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~gi~vd~~~~ 264 (410)
T 3ef6_A 188 GAWLRGLLTELGVQVELGTGVVGFSG--EGQLEQVMASDGRSFVADSALICVGAEPADQLARQAGLACD-RGVIVDHCGA 264 (410)
T ss_dssp HHHHHHHHHHHTCEEECSCCEEEEEC--SSSCCEEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBS-SSEECCTTSB
T ss_pred HHHHHHHHHHCCCEEEeCCEEEEEec--cCcEEEEEECCCCEEEcCEEEEeeCCeecHHHHHhCCCccC-CeEEEccCee
Confidence 99999999999999999999999985 335567889999999999999999999999987654 5555 5699999999
Q ss_pred cCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccc--eEE
Q 018416 163 SSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVG--EVV 240 (356)
Q Consensus 163 ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~--~~~ 240 (356)
|+.|+|||+|||+..+... |.+.+++++..|..||+.||.||+|.. .+|..+|++|+++|++.++++|.+.+ +.+
T Consensus 265 t~~~~IyA~GD~a~~~~~~-g~~~~~~~~~~A~~qg~~aa~~i~g~~--~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~ 341 (410)
T 3ef6_A 265 TLAKGVFAVGDVASWPLRA-GGRRSLETYMNAQRQAAAVAAAILGKN--VSAPQLPVSWTEIAGHRMQMAGDIEGPGDFV 341 (410)
T ss_dssp CSSTTEEECGGGEEEEBTT-SSEECCCCHHHHHHHHHHHHHHHTTCC--CCCCBCCEEEEEETTEEEEEESCSSSSSEEE
T ss_pred ECCCCEEEEEcceeccCCC-CCeeeechHHHHHHHHHHHHHHHcCCC--CCCCCCCeeEEEECCceEEEEcCCCCCCEEE
Confidence 9999999999999988765 777788899999999999999999976 57888999999999999999998653 666
Q ss_pred EEccCCCCceEEEEeeCCeEEEEEEeCCCHHHHHHHHHHHHcCCCcCcHHHHhhcCCCcc
Q 018416 241 HYGNFSGTTFGAYWVNKGRLVGSFLEGGTKEEYEAIAKATRLQPVVEDLAELETQGLGFA 300 (356)
Q Consensus 241 ~~g~~~~~~~~~~~~~~g~ilGa~~vg~~~~~~~~~a~ai~~~~~~~dl~~l~~~~~~ya 300 (356)
..++.+...|.+++.++|+|+|+.++|. ......+..+|+.+..++ ..+|.++.+.+.
T Consensus 342 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~i~~~~~~~-~~~l~~~~~~l~ 399 (410)
T 3ef6_A 342 SRGMPGSGAALLFRLQERRIQAVVAVDA-PRDFALATRLVEARAAIE-PARLADLSNSMR 399 (410)
T ss_dssp EESCTTSSSEEEEEEETTEEEEEEEESC-HHHHHHHHHHHHHTCBCC-HHHHHCTTSCGG
T ss_pred EEeeCCCCeEEEEEEECCEEEEEEEECC-hHHHHHHHHHHhCCCCCC-HHHhcCCCCCHH
Confidence 7777766679999999999999999995 666777888999888775 456665544433
No 12
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=2.7e-40 Score=322.91 Aligned_cols=277 Identities=26% Similarity=0.408 Sum_probs=239.0
Q ss_pred CCccCCC-CCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHH
Q 018416 4 KLEEFGL-SGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPK 82 (356)
Q Consensus 4 ~p~~~~i-pG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~ 82 (356)
+|+.+++ ||.+ ++++++++.+|+.++++.+. .+++++|||+|++|+|+|..|+++|.+||++++.++++++.++++
T Consensus 112 ~~~~~~i~~G~~-~~v~~~~~~~~~~~l~~~~~--~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~ 188 (408)
T 2gqw_A 112 APRALPTLQGAT-MPVHTLRTLEDARRIQAGLR--PQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPAT 188 (408)
T ss_dssp EECCCGGGTTCS-SCEEECCSHHHHHHHHTTCC--TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHH
T ss_pred CCCCCCccCCCC-CcEEEECCHHHHHHHHHHhh--cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHH
Confidence 5777888 9987 89999999999999877664 579999999999999999999999999999999999998768999
Q ss_pred HHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchhhhcc-cccccCcEEEeccc
Q 018416 83 IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTLEKGGIKVTGRL 161 (356)
Q Consensus 83 ~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-l~~~~g~I~vd~~l 161 (356)
+.+.+.+.|+++||++++++++++++ ++ .+++++|+++++|.||+++|++|++++++.. +..++ +|.||++|
T Consensus 189 ~~~~l~~~l~~~GV~i~~~~~v~~i~---~~---~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~gl~~~~-gi~Vd~~~ 261 (408)
T 2gqw_A 189 LADFVARYHAAQGVDLRFERSVTGSV---DG---VVLLDDGTRIAADMVVVGIGVLANDALARAAGLACDD-GIFVDAYG 261 (408)
T ss_dssp HHHHHHHHHHHTTCEEEESCCEEEEE---TT---EEEETTSCEEECSEEEECSCEEECCHHHHHHTCCBSS-SEECCTTC
T ss_pred HHHHHHHHHHHcCcEEEeCCEEEEEE---CC---EEEECCCCEEEcCEEEECcCCCccHHHHHhCCCCCCC-CEEECCCC
Confidence 99999999999999999999999997 23 5678899999999999999999999987654 55554 49999999
Q ss_pred ccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeec-ccceEE
Q 018416 162 QSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGD-NVGEVV 240 (356)
Q Consensus 162 ~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~-~~~~~~ 240 (356)
||+.|+|||+|||+..+.+.+|.+.+++++..|..||+.+|.||++... ..+..+|++|+++|++.++++|. ...+.+
T Consensus 262 ~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~-~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~ 340 (408)
T 2gqw_A 262 RTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTA-PGYAELPWYWSDQGALRIQVAGLASGDEEI 340 (408)
T ss_dssp BCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTTS-CCCCCCCEEEEEETTEEEEEEECSCCSEEE
T ss_pred ccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCCC-CcCCCCCeEEEEECCceEEEECCCCCCEEE
Confidence 9999999999999998877677777778999999999999999998753 26778999999999999999997 223455
Q ss_pred EEccCC--CCceEEEEeeCCeEEEEEEeCCCHHHHHHHHHHHHcCCCcCcHHHHh
Q 018416 241 HYGNFS--GTTFGAYWVNKGRLVGSFLEGGTKEEYEAIAKATRLQPVVEDLAELE 293 (356)
Q Consensus 241 ~~g~~~--~~~~~~~~~~~g~ilGa~~vg~~~~~~~~~a~ai~~~~~~~dl~~l~ 293 (356)
..++.. ..+|.+++.++|+|+|++++|. ..++..+..+|+.+.+++. .+|.
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~l~G~~~~g~-~~~~~~~~~~i~~~~~~~~-~~l~ 393 (408)
T 2gqw_A 341 VRGEVSLDAPKFTLIELQKGRIVGATCVNN-ARDFAPLRRLLAVGAKPDR-AALA 393 (408)
T ss_dssp EESCCCSSSCCEEEEEEETTEEEEEEEESC-HHHHHHHHHHHHTTCCCCH-HHHH
T ss_pred EEccCCCCCCeEEEEEEeCCEEEEEEEECC-hHHHHHHHHHHHCCCCCCh-HHhc
Confidence 556554 4568888889999999999996 4567888999999998864 3444
No 13
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=1.4e-41 Score=335.70 Aligned_cols=304 Identities=24% Similarity=0.278 Sum_probs=250.2
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|..+++||.+.++++++++++++.++++.+....+++++|||+|++|+|+|..|+++|.+||++++.++++++.+++++
T Consensus 114 ~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~ 193 (447)
T 1nhp_A 114 VPFELDIPGKDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEF 193 (447)
T ss_dssp EECCCCSTTTTSBSEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHH
T ss_pred CcCCCCCCCCCCCCeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccccCCHHH
Confidence 57778899998889999999999999988876446899999999999999999999999999999999999986689999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchhhhccccc-ccCcEEEecccc
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQLTL-EKGGIKVTGRLQ 162 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~l~~-~~g~I~vd~~l~ 162 (356)
.+.+.+.+++.||++++++++++++.+ +.+..+.+ +++++++|.|++|+|++|++.+++..+.. .+|+|.||++||
T Consensus 194 ~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~v~~v~~-~~~~i~~d~vi~a~G~~p~~~~~~~~~~~~~~G~i~Vd~~~~ 270 (447)
T 1nhp_A 194 TDVLTEEMEANNITIATGETVERYEGD--GRVQKVVT-DKNAYDADLVVVAVGVRPNTAWLKGTLELHPNGLIKTDEYMR 270 (447)
T ss_dssp HHHHHHHHHTTTEEEEESCCEEEEECS--SBCCEEEE-SSCEEECSEEEECSCEEESCGGGTTTSCBCTTSCBCCCTTCB
T ss_pred HHHHHHHHHhCCCEEEcCCEEEEEEcc--CcEEEEEE-CCCEEECCEEEECcCCCCChHHHHhhhhhcCCCcEEECcccc
Confidence 999999999999999999999999852 44434555 56789999999999999999987665555 568899999999
Q ss_pred cCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccceEE--
Q 018416 163 SSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEVV-- 240 (356)
Q Consensus 163 ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~~-- 240 (356)
|+.|+|||+|||+..+...+|.+.+++++..|.+||+.+|.||++... ......+++++.++++.++++|.++.++.
T Consensus 271 t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~-~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~ 349 (447)
T 1nhp_A 271 TSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEEPVK-PFPGVQGSSGLAVFDYKFASTGINEVMAQKL 349 (447)
T ss_dssp CSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSSCCC-CCCCBCCCEEEEETTEEEEEEECCHHHHHHH
T ss_pred CCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcCCCC-CCCCccccEEEEECCeeeEEecCCHHHHHHc
Confidence 999999999999998766666666678899999999999999998542 22334678889999999999998764321
Q ss_pred -------EEccC--------CCCceEEEEe--eCCeEEEEEEeCCC-HH-HHHHHHHHHHcCCCcCcHHHHhhcCCCccc
Q 018416 241 -------HYGNF--------SGTTFGAYWV--NKGRLVGSFLEGGT-KE-EYEAIAKATRLQPVVEDLAELETQGLGFAL 301 (356)
Q Consensus 241 -------~~g~~--------~~~~~~~~~~--~~g~ilGa~~vg~~-~~-~~~~~a~ai~~~~~~~dl~~l~~~~~~yap 301 (356)
.+.+. +..+|.+++. ++|+|+|+|++|+. +. .++.++.+|++++|++||.+++ +.|+|
T Consensus 350 g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~~~---~~~~P 426 (447)
T 1nhp_A 350 GKETKAVTVVEDYLMDFNPDKQKAWFKLVYDPETTQILGAQLMSKADLTANINAISLAIQAKMTIEDLAYAD---FFFQP 426 (447)
T ss_dssp TCCCEEEEEEEESSCTTCTTCCEEEEEEEECTTTCBEEEEEEEESSCCTTHHHHHHHHHHTTCBHHHHHTCC---CCCCT
T ss_pred CCceEEEEEEcCCccccCCCCceEEEEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhcc---eecCC
Confidence 11111 1123666665 37999999999987 54 4677899999999999998776 78999
Q ss_pred CcCCCCCCCCccc
Q 018416 302 AVSQKPLPSTPVD 314 (356)
Q Consensus 302 ~~~~~~~~~~~~~ 314 (356)
++++.-.+.+..+
T Consensus 427 t~~e~~~~~~~aa 439 (447)
T 1nhp_A 427 AFDKPWNIINTAA 439 (447)
T ss_dssp TTCCSSCHHHHHH
T ss_pred CCCCcccHHHHHH
Confidence 9998866554443
No 14
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=8e-41 Score=333.26 Aligned_cols=302 Identities=22% Similarity=0.317 Sum_probs=250.7
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|+.+++||.+.++++++++.+++.++++.+....+++++|||+|++|+|+|..|+++|.+||++++.+++++. +++++
T Consensus 151 ~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~ 229 (480)
T 3cgb_A 151 RPVMPEWEGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTI-YDGDM 229 (480)
T ss_dssp EECCCCCBTTTSBTEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSS-SCHHH
T ss_pred cccCCCCCCccCCCEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhc-CCHHH
Confidence 46778899988789999999999999988876546899999999999999999999999999999999999986 89999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchhhhcc-ccc-ccCcEEEeccc
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTL-EKGGIKVTGRL 161 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-l~~-~~g~I~vd~~l 161 (356)
.+.+.+.+++.||++++++++++++. ++.+..+.++ +.++++|.||+|+|++|++++++.. +.. ++|+|.||++|
T Consensus 230 ~~~l~~~l~~~Gv~i~~~~~v~~i~~--~~~v~~v~~~-~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~~~G~I~Vd~~~ 306 (480)
T 3cgb_A 230 AEYIYKEADKHHIEILTNENVKAFKG--NERVEAVETD-KGTYKADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEVNAYM 306 (480)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEE--SSBEEEEEET-TEEEECSEEEECSCEEESCGGGTTSCCCBCTTSCBCCCTTS
T ss_pred HHHHHHHHHHcCcEEEcCCEEEEEEc--CCcEEEEEEC-CCEEEcCEEEECcCCCcChHHHHhCCcccCCCCCEEECCCc
Confidence 99999999999999999999999986 3445456554 5689999999999999999887654 665 57899999999
Q ss_pred ccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCC-CCCCeEEEEecCceEEEeecccceEE
Q 018416 162 QSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKF-DYLPFFYSRVFTLSWQFYGDNVGEVV 240 (356)
Q Consensus 162 ~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~-~~~p~~~~~~~~~~~~~~G~~~~~~~ 240 (356)
||+.|+|||+|||+..+...+|.+.+++++..|..||+.||.||++... .+ +..++.++.++++.++++|+++.++.
T Consensus 307 ~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~--~~~~~~~~~~~~~~~~~~~~vG~~~~~a~ 384 (480)
T 3cgb_A 307 QTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLDKRR--AFKGTLGTGIIKFMNLTLARTGLNEKEAK 384 (480)
T ss_dssp BCSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCC--CCCCBCCCEEEEETTEEEEEEECCHHHHH
T ss_pred cCCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcCCCc--cCCCccceeEEEECCcEEEEeCCCHHHHH
Confidence 9999999999999988776667666678899999999999999998542 33 34456789999999999998764321
Q ss_pred ---------EE-cc-C------CCCceEEEEe--eCCeEEEEEEeCCC-HHH-HHHHHHHHHcCCCcCcHHHHhhcCCCc
Q 018416 241 ---------HY-GN-F------SGTTFGAYWV--NKGRLVGSFLEGGT-KEE-YEAIAKATRLQPVVEDLAELETQGLGF 299 (356)
Q Consensus 241 ---------~~-g~-~------~~~~~~~~~~--~~g~ilGa~~vg~~-~~~-~~~~a~ai~~~~~~~dl~~l~~~~~~y 299 (356)
.+ .. . ...+|.+++. ++|+|+|++++|+. +.+ ++.++.||++++|++||.++. +.|
T Consensus 385 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~vg~~~a~e~i~~~~~ai~~~~~~~~l~~~~---~~~ 461 (480)
T 3cgb_A 385 GLHIPYKTVKVDSTNMAGYYPNAKPLYLKLLYRSDTKQLLGGQVIGEEGVDKRIDVIAMALFNKMSIHDLEDVD---LSY 461 (480)
T ss_dssp HTTCCEEEEEEEEESSCTTSTTCCEEEEEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCC---CCC
T ss_pred HcCCceEEEEEecCCcccccCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCHHHHhhcc---ccc
Confidence 11 11 0 1123666665 58999999999987 654 677899999999999998876 789
Q ss_pred ccCcCCCCCCCCccc
Q 018416 300 ALAVSQKPLPSTPVD 314 (356)
Q Consensus 300 ap~~~~~~~~~~~~~ 314 (356)
+|++++..++.+..+
T Consensus 462 ~Pt~~e~~~~~~~a~ 476 (480)
T 3cgb_A 462 APPYNSVWDPIQQAA 476 (480)
T ss_dssp CTTTCCSSCHHHHHH
T ss_pred CCCCCCchhHHHHHH
Confidence 999999876655444
No 15
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=8e-40 Score=321.85 Aligned_cols=283 Identities=27% Similarity=0.476 Sum_probs=241.7
Q ss_pred CCccCCCCCCCCCC---eEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCC
Q 018416 4 KLEEFGLSGSDAEN---VCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFT 80 (356)
Q Consensus 4 ~p~~~~ipG~~~~~---v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d 80 (356)
+|+.+++||.+.++ ++++++.+|+.++++.+. .+++++|||+|++|+|+|..|+++|.+||++++.++++++.++
T Consensus 113 ~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l~--~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~ 190 (431)
T 1q1r_A 113 RPRPLPVASGAVGKANNFRYLRTLEDAECIRRQLI--ADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTA 190 (431)
T ss_dssp EECCCGGGTTHHHHSTTEEESSSHHHHHHHHHTCC--TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSC
T ss_pred CccCCCCCCcccCCCceEEEECCHHHHHHHHHHhh--cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccchhh
Confidence 57778889987666 999999999999988764 5899999999999999999999999999999999999987789
Q ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEc-CCCcEEEEEeCCCcEEecCeEEEecCCCCCchhhhcc-cccccCcEEEe
Q 018416 81 PKIASYYEEYYKSKGVKFVKGTVLSSFDVD-SNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTLEKGGIKVT 158 (356)
Q Consensus 81 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~-~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-l~~~~g~I~vd 158 (356)
+++.+.+.+.+++.||++++++++++++.+ +++.+..+++++|+++++|.||+++|++|++++++.. +..+ ++|.||
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~-~gi~Vd 269 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELASAAGLQVD-NGIVIN 269 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBS-SSEECC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCcchhhccCCCCC-CCEEEC
Confidence 999999999999999999999999999862 3456667888999999999999999999999987654 5555 459999
Q ss_pred cccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccc-
Q 018416 159 GRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVG- 237 (356)
Q Consensus 159 ~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~- 237 (356)
++|||+.|+|||+|||+..+.+.+|.+.+++++..|..||+.+|.||+|.. ..+..+|++|+++|++.++++|.+++
T Consensus 270 ~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~--~~~~~~p~~~~~~~~~~~~~~G~~~~~ 347 (431)
T 1q1r_A 270 EHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGKV--PRDEAAPWFWSDQYEIGLKMVGLSEGY 347 (431)
T ss_dssp TTSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTTCC--CCCCCCCEEEEEETTEEEEEEECCTTC
T ss_pred CCcccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcCCC--CCCCCCCeEEEEECCceEEEEeCCCCC
Confidence 999999999999999999887777877788899999999999999999875 46778999999999999999998753
Q ss_pred -eEEEEccCCCCceEEEEeeCCeEEEEEEeCCCHHHHHHHHHHHHcCCCcCcHHHHh
Q 018416 238 -EVVHYGNFSGTTFGAYWVNKGRLVGSFLEGGTKEEYEAIAKATRLQPVVEDLAELE 293 (356)
Q Consensus 238 -~~~~~g~~~~~~~~~~~~~~g~ilGa~~vg~~~~~~~~~a~ai~~~~~~~dl~~l~ 293 (356)
+.+..++.+...|.+++.++|+|+|++++|.. .....+..+|..+.++. ..+|.
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~g~~-~~~~~~~~~i~~~~~~~-~~~l~ 402 (431)
T 1q1r_A 348 DRIIVRGSLAQPDFSVFYLQGDRVLAVDTVNRP-VEFNQSKQIITDRLPVE-PNLLG 402 (431)
T ss_dssp SEEEEEEETTTTEEEEEEEETTEEEEEEEESCH-HHHHHHHHHHHTTCCCC-HHHHT
T ss_pred CEEEEEccCCCCeEEEEEEeCCEEEEEEEECCh-HHHHHHHHHHHCCCCCC-HHHhh
Confidence 45566665555688888899999999999964 44555667777777664 34444
No 16
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=6.3e-39 Score=311.04 Aligned_cols=256 Identities=18% Similarity=0.280 Sum_probs=222.1
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|+.+++||.+ +++++++++|+.++++.+. ++++++|||+|++|+|+|..|+++|.+||++++.++++++.+++++
T Consensus 115 ~p~~p~i~G~~--~v~~~~~~~d~~~l~~~l~--~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~ 190 (385)
T 3klj_A 115 IANKIKVPHAD--EIFSLYSYDDALKIKDECK--NKGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDG 190 (385)
T ss_dssp EECCCCCTTCS--CEECCSSHHHHHHHHHHHH--HHSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHH
T ss_pred CcCCCCCCCCC--CeEEeCCHHHHHHHHHHhh--cCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHH
Confidence 57888999987 8999999999999998886 4789999999999999999999999999999999999998789999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchhhhcc-cccccCcEEEecccc
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTLEKGGIKVTGRLQ 162 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-l~~~~g~I~vd~~l~ 162 (356)
.+.+.+.++++||++++++.++++ |+++++|.||+++|++|++++++.. +..+ ++|.||++|+
T Consensus 191 ~~~~~~~l~~~gV~~~~~~~v~~i---------------g~~~~~D~vv~a~G~~p~~~~~~~~gl~~~-~gi~vd~~~~ 254 (385)
T 3klj_A 191 GLFLKDKLDRLGIKIYTNSNFEEM---------------GDLIRSSCVITAVGVKPNLDFIKDTEIASK-RGILVNDHME 254 (385)
T ss_dssp HHHHHHHHHTTTCEEECSCCGGGC---------------HHHHHHSEEEECCCEEECCGGGTTSCCCBS-SSEEECTTCB
T ss_pred HHHHHHHHHhCCCEEEeCCEEEEc---------------CeEEecCeEEECcCcccChhhhhhcCCCcC-CCEEECCCcc
Confidence 999999999999999999888665 5679999999999999999988764 5555 4599999999
Q ss_pred cCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCC-CCeEEEEecCceEEEeecccce---
Q 018416 163 SSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDY-LPFFYSRVFTLSWQFYGDNVGE--- 238 (356)
Q Consensus 163 ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~-~p~~~~~~~~~~~~~~G~~~~~--- 238 (356)
|+.|+|||+|||+..+... ..++..|..||+.||.||+|... .+.. +|++|+++|++.++++|.++.+
T Consensus 255 t~~~~IyA~GD~a~~~~~~------~~~~~~A~~qg~~aa~~i~g~~~--~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 326 (385)
T 3klj_A 255 TSIKDIYACGDVAEFYGKN------PGLINIANKQGEVAGLNACGEDA--SYSEIIPSPILKVSGISIISCGDIENNKPS 326 (385)
T ss_dssp CSSTTEEECGGGEEETTBC------CCCHHHHHHHHHHHHHHHTTCCC--CCCCCCCCCEEEETTEEEEEESCCTTCCCS
T ss_pred cCCCCEEEEEeeEecCCCc------ccHHHHHHHHHHHHHHHhcCCCc--CCCCCCCcEEEEeCCCcEEEEcCCCCCCCe
Confidence 9999999999999876432 25789999999999999998763 4544 7999999999999999987643
Q ss_pred EEEEccCCCCceEEEEeeCCeEEEEEEeCCCHHHHHHHHHHHHcCCCcCcH
Q 018416 239 VVHYGNFSGTTFGAYWVNKGRLVGSFLEGGTKEEYEAIAKATRLQPVVEDL 289 (356)
Q Consensus 239 ~~~~g~~~~~~~~~~~~~~g~ilGa~~vg~~~~~~~~~a~ai~~~~~~~dl 289 (356)
.+.. +.....|.+++.++|+|+|++++|... ....+..+|+++.++++|
T Consensus 327 ~~~~-~~~~~~~~~~~~~~~~l~g~~~~g~~~-~~~~~~~~i~~~~~~~~~ 375 (385)
T 3klj_A 327 KVFR-STQEDKYIVCMLKENKIDAAAVIGDVS-LGTKLKKAIDSSKSFDNI 375 (385)
T ss_dssp EEEE-EECSSCEEEEEEETTEEEEEEEESCHH-HHHHHHHHHHTTCBCSCC
T ss_pred EEEE-ECCCCeEEEEEEECCEEEEEEEECCcH-HHHHHHHHHHcCCCcccc
Confidence 3333 444556999999999999999999644 445688999999999886
No 17
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=1.3e-37 Score=313.19 Aligned_cols=282 Identities=22% Similarity=0.295 Sum_probs=225.7
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|..+++||.+.+++++. +++. +.++..++++++|||+|++|+|+|..|++.|.+||++++.+++++. +++++
T Consensus 185 ~p~~p~i~G~~~~~v~~~---~~~~---~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~ 257 (523)
T 1mo9_A 185 GPGTLDVPGVNAKGVFDH---ATLV---EELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI-KDNET 257 (523)
T ss_dssp ECCCCCSTTTTSBTEEEH---HHHH---HHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC-CSHHH
T ss_pred CCCCCCCCCcccCcEeeH---HHHH---HHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc-ccHHH
Confidence 577788999887778753 3332 1233323499999999999999999999999999999999999997 89999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcE--EEEEeCCCc-EEecCeEEEecCCCCCch-hhhcc-ccc-ccCcEEE
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKV--VAVNLRDGN-RLPTDMVVVGIGIRPNTS-LFEGQ-LTL-EKGGIKV 157 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v--~~v~~~~g~-~i~~D~vi~a~G~~p~~~-l~~~~-l~~-~~g~I~v 157 (356)
.+.+.+.|+++||+++++++|++++.++++.+ ..+++++|+ ++++|.||+|+|++|+++ +++.. +.. ++|+|.|
T Consensus 258 ~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl~~~~~G~i~V 337 (523)
T 1mo9_A 258 RAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLV 337 (523)
T ss_dssp HHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHHHHHHTCCBCTTSCBCC
T ss_pred HHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCccCHHHcCCccCCCCCEEE
Confidence 99999999999999999999999987445543 457788887 899999999999999998 56543 666 5788999
Q ss_pred ecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccc
Q 018416 158 TGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVG 237 (356)
Q Consensus 158 d~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~ 237 (356)
|++|||+.|+|||+|||+..+ .++..|..||+.||.||++......+..+|+++ +++..++++|+++.
T Consensus 338 d~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~--~~~~~~a~vG~~e~ 405 (523)
T 1mo9_A 338 NEYLQTSVPNVYAVGDLIGGP----------MEMFKARKSGCYAARNVMGEKISYTPKNYPDFL--HTHYEVSFLGMGEE 405 (523)
T ss_dssp CTTSBCSSTTEEECGGGGCSS----------CSHHHHHHHHHHHHHHHTTCCCCCCCCSCCEEE--ESSSEEEEEECCHH
T ss_pred CCCCccCCCCEEEEeecCCCc----------ccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEE--ECCCceEEEeCCHH
Confidence 999999999999999999754 356789999999999999865333466788654 57788999998875
Q ss_pred eE-------EE----Ecc-----------------------CCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHH
Q 018416 238 EV-------VH----YGN-----------------------FSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKAT 280 (356)
Q Consensus 238 ~~-------~~----~g~-----------------------~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai 280 (356)
++ .. +.+ .+..+|.|+.. ++|+|+|+|++|+.+.+ ++.++.||
T Consensus 406 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai 485 (523)
T 1mo9_A 406 EARAAGHEIVTIKMPPDTENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDAKTRKVLGAHHVGYGAKDAFQYLNVLI 485 (523)
T ss_dssp HHHHTTCCEEEEEESCCSTTTTCSSCSCCTTTHHHHHSTTTGGGGCEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHH
T ss_pred HHHhCCCCEEEEEEecccccccccccccccccccceEEeecCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHH
Confidence 32 11 111 11124777666 58999999999987554 68899999
Q ss_pred HcCCCcCcHHHHhhcCCCcccCcCCC
Q 018416 281 RLQPVVEDLAELETQGLGFALAVSQK 306 (356)
Q Consensus 281 ~~~~~~~dl~~l~~~~~~yap~~~~~ 306 (356)
++++|++||.+++ .+.++|++++.
T Consensus 486 ~~~~t~~~l~~~~--~~~~~Pt~~e~ 509 (523)
T 1mo9_A 486 KQGLTVDELGDMD--ELFLNPTHFIQ 509 (523)
T ss_dssp HTTCBHHHHHTSC--CCSSCSCCHHH
T ss_pred HCCCCHHHHHhCC--cceECCCHHHH
Confidence 9999999998872 15778888765
No 18
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=7.8e-38 Score=310.24 Aligned_cols=275 Identities=20% Similarity=0.232 Sum_probs=217.8
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|+.+++||.+.. + .+..++..+. ..+++++|||+|++|+|+|..|+++|.+||++++.+++++. +|+++
T Consensus 145 ~~~~~~~~g~~~~-~---~~~~~~~~~~-----~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~ 214 (464)
T 2a8x_A 145 STRLVPGTSLSAN-V---VTYEEQILSR-----ELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN-EDADV 214 (464)
T ss_dssp EECCCTTCCCBTT-E---ECHHHHHTCS-----SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHH
T ss_pred CCCCCCCCCCCce-E---EecHHHhhcc-----ccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHH
Confidence 4666778886543 3 3555554431 14799999999999999999999999999999999999996 89999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeC-CC--cEEecCeEEEecCCCCCchh--hhc-cccc-ccCcEE
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR-DG--NRLPTDMVVVGIGIRPNTSL--FEG-QLTL-EKGGIK 156 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~-~g--~~i~~D~vi~a~G~~p~~~l--~~~-~l~~-~~g~I~ 156 (356)
.+.+.+.|+++||++++++++++++.++++ ..+.+. +| +++++|.|++++|++||+++ ++. ++.. ++|+|.
T Consensus 215 ~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~ 292 (464)
T 2a8x_A 215 SKEIEKQFKKLGVTILTATKVESIADGGSQ--VTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIG 292 (464)
T ss_dssp HHHHHHHHHHHTCEEECSCEEEEEEECSSC--EEEEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBC
T ss_pred HHHHHHHHHHcCCEEEeCcEEEEEEEcCCe--EEEEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEe
Confidence 999999999999999999999999874333 345554 56 67999999999999999986 444 3665 468899
Q ss_pred EecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcC-CCCC-CCCCCCCeEEEEecCceEEEeec
Q 018416 157 VTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME-PDKT-DKFDYLPFFYSRVFTLSWQFYGD 234 (356)
Q Consensus 157 vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g-~~~~-~~~~~~p~~~~~~~~~~~~~~G~ 234 (356)
||++|||+.|+|||+|||+..+ .++..|.+||+.||.||++ .... ..+..+|+ ..+++..++++|+
T Consensus 293 vd~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~--~~~~~~~~a~vG~ 360 (464)
T 2a8x_A 293 VDDYMRTNVGHIYAIGDVNGLL----------QLAHVAEAQGVVAAETIAGAETLTLGDHRMLPR--ATFCQPNVASFGL 360 (464)
T ss_dssp CCTTSBCSSTTEEECGGGGCSS----------CSHHHHHHHHHHHHHHHHTCCCCCCCCGGGSCE--EECSSSEEEEEEC
T ss_pred ECcCCccCCCCEEEeECcCCCc----------cCHHHHHHHHHHHHHHhcCCCCcccCCCCCCCE--EEECCCCeEEEcC
Confidence 9999999999999999999754 3577899999999999998 4432 23555674 4678889999998
Q ss_pred ccceEE------EEc------------cCCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcCcHHHHh
Q 018416 235 NVGEVV------HYG------------NFSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELE 293 (356)
Q Consensus 235 ~~~~~~------~~g------------~~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~ 293 (356)
++.++. ..+ ..+..+|.+++. ++|+|+|+|++|+.+.+ ++.++.||++++|++||.++.
T Consensus 361 ~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~ 440 (464)
T 2a8x_A 361 TEQQARNEGYDVVVAKFPFTANAKAHGVGDPSGFVKLVADAKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARNV 440 (464)
T ss_dssp CHHHHHHTTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEEETTGGGGHHHHHHHHHTTCBHHHHTTSC
T ss_pred CHHHHHhcCCCEEEEEEEcchhhhhhhcCCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhhCc
Confidence 875321 110 112345878776 48999999999987654 678999999999999998755
Q ss_pred hcCCCcccCcCCC
Q 018416 294 TQGLGFALAVSQK 306 (356)
Q Consensus 294 ~~~~~yap~~~~~ 306 (356)
.++|++++.
T Consensus 441 ----~~~Pt~~e~ 449 (464)
T 2a8x_A 441 ----HTHPTMSEA 449 (464)
T ss_dssp ----CCTTCTTHH
T ss_pred ----cCCCChHHH
Confidence 566888765
No 19
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=1.2e-37 Score=309.75 Aligned_cols=278 Identities=22% Similarity=0.259 Sum_probs=220.8
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|..+++||.+.++++ +.+++.++ .. .+++++|||+|++|+|+|..|+++|.+||++++.++++++.+|+++
T Consensus 151 ~p~~p~i~g~~~~~v~---t~~~~~~~----~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~ 222 (474)
T 1zmd_A 151 EVTPFPGITIDEDTIV---SSTGALSL----KK-VPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEI 222 (474)
T ss_dssp EECCCTTCCCCSSSEE---CHHHHTTC----SS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHH
T ss_pred CCCCCCCCCCCcCcEE---cHHHHhhc----cc-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCHHH
Confidence 4677888888755665 44444332 22 4799999999999999999999999999999999999994489999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEE-----eCCCcEEecCeEEEecCCCCCchh--hhc-cccc-ccCc
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVN-----LRDGNRLPTDMVVVGIGIRPNTSL--FEG-QLTL-EKGG 154 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~-----~~~g~~i~~D~vi~a~G~~p~~~l--~~~-~l~~-~~g~ 154 (356)
.+.+.+.|+++||++++++++++++.++++.+ .++ ..+++++++|.|++++|++||+++ ++. ++.. .+|+
T Consensus 223 ~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~ 301 (474)
T 1zmd_A 223 SKNFQRILQKQGFKFKLNTKVTGATKKSDGKI-DVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGR 301 (474)
T ss_dssp HHHHHHHHHHTTCEEECSEEEEEEEECTTSCE-EEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSC
T ss_pred HHHHHHHHHHCCCEEEeCceEEEEEEcCCceE-EEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCC
Confidence 99999999999999999999999987443323 344 346678999999999999999986 443 3665 4688
Q ss_pred EEEecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeec
Q 018416 155 IKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGD 234 (356)
Q Consensus 155 I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~ 234 (356)
|.||++|||+.|+|||+|||+..+ .++..|..||+.||.||++......+..+|++ .+++..++++|+
T Consensus 302 i~vd~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~--~~~~~~~a~vG~ 369 (474)
T 1zmd_A 302 IPVNTRFQTKIPNIYAIGDVVAGP----------MLAHKAEDEGIICVEGMAGGAVHIDYNCVPSV--IYTHPEVAWVGK 369 (474)
T ss_dssp CCCCTTCBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHTTCCCCCCGGGCCEE--ECSSSEEEEEEC
T ss_pred EEECcCCccCCCCEEEeeecCCCC----------ccHHHHHHHHHHHHHHhcCCCCcCCCCCCCEE--EECCCCeEEEeC
Confidence 999999999999999999999754 35778999999999999986533445567754 467889999999
Q ss_pred ccceEE------EE-c-----------cCCCCceEEEEee--CCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcCcHHHHh
Q 018416 235 NVGEVV------HY-G-----------NFSGTTFGAYWVN--KGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELE 293 (356)
Q Consensus 235 ~~~~~~------~~-g-----------~~~~~~~~~~~~~--~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~ 293 (356)
++.++. .. . ..+..+|.+++.+ +|+|+|++++|+.+.+ ++.++.||++++|++||.++.
T Consensus 370 ~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~ 449 (474)
T 1zmd_A 370 SEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVC 449 (474)
T ss_dssp CHHHHHHHTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHHSC
T ss_pred CHHHHHhcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCc
Confidence 875421 11 0 1123458787764 8999999999988655 578899999999999998855
Q ss_pred hcCCCcccCcCCC
Q 018416 294 TQGLGFALAVSQK 306 (356)
Q Consensus 294 ~~~~~yap~~~~~ 306 (356)
.++|++++.
T Consensus 450 ----~~~Pt~~e~ 458 (474)
T 1zmd_A 450 ----HAHPTLSEA 458 (474)
T ss_dssp ----CCTTCTHHH
T ss_pred ----CCCCCHHHH
Confidence 566888765
No 20
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=6.5e-38 Score=312.38 Aligned_cols=273 Identities=17% Similarity=0.219 Sum_probs=216.9
Q ss_pred CccCC-CCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 5 LEEFG-LSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 5 p~~~~-ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
|..++ +| .+ ++++ +.+++..+ . ..+++++|||+|++|+|+|..|+++|.+||++++.+++++. +|+++
T Consensus 160 p~~~~~i~-~~-~~v~---~~~~~~~~----~-~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~ 228 (482)
T 1ojt_A 160 VTKLPFIP-ED-PRII---DSSGALAL----K-EVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG-ADRDL 228 (482)
T ss_dssp ECCCSSCC-CC-TTEE---CHHHHTTC----C-CCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-SCHHH
T ss_pred CCCCCCCC-cc-CcEE---cHHHHhcc----c-ccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-cCHHH
Confidence 44444 55 33 2444 55555443 1 14799999999999999999999999999999999999997 89999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCC----CcEEecCeEEEecCCCCCchh--hhcc-ccc-ccCcE
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD----GNRLPTDMVVVGIGIRPNTSL--FEGQ-LTL-EKGGI 155 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~----g~~i~~D~vi~a~G~~p~~~l--~~~~-l~~-~~g~I 155 (356)
.+.+.+.|+++||++++++++++++.++++ ..+++.+ |+++++|.|++++|++||+++ ++.. +.. .+|+|
T Consensus 229 ~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~--~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i 306 (482)
T 1ojt_A 229 VKVWQKQNEYRFDNIMVNTKTVAVEPKEDG--VYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFI 306 (482)
T ss_dssp HHHHHHHHGGGEEEEECSCEEEEEEEETTE--EEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCC
T ss_pred HHHHHHHHHhcCCEEEECCEEEEEEEcCCe--EEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCE
Confidence 999999999999999999999999864332 4566666 778999999999999999987 3443 665 45889
Q ss_pred EEecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecc
Q 018416 156 KVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDN 235 (356)
Q Consensus 156 ~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~ 235 (356)
.||++|||+.|+|||+|||+..+ .++..|.+||+.||.||++......+..+| +..++++.++++|++
T Consensus 307 ~vd~~~~t~~~~IyA~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~~~~~~~~~p--~~~~~~~~~a~vG~t 374 (482)
T 1ojt_A 307 EVDKQMRTNVPHIYAIGDIVGQP----------MLAHKAVHEGHVAAENCAGHKAYFDARVIP--GVAYTSPEVAWVGET 374 (482)
T ss_dssp CCCTTSBCSSTTEEECGGGTCSS----------CCHHHHHHHHHHHHHHHTTCCCCCCCCCCC--EEECSSSCEEEEECC
T ss_pred eeCCCcccCCCCEEEEEcccCCC----------ccHHHHHHHHHHHHHHHcCCCccCCCCCCC--EEEEcCCCeEEEeCC
Confidence 99999999999999999999754 357789999999999999865333455566 456788899999998
Q ss_pred cceEE------EEc------------cCCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcCcHHHHhh
Q 018416 236 VGEVV------HYG------------NFSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELET 294 (356)
Q Consensus 236 ~~~~~------~~g------------~~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~ 294 (356)
+.++. ..+ ..+..+|.+++. ++|+|+|+|++|+.+.+ ++.++.||++++|++||.++.
T Consensus 375 e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~- 453 (482)
T 1ojt_A 375 ELSAKASARKITKANFPWAASGRAIANGCDKPFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGKTI- 453 (482)
T ss_dssp HHHHHHHTCCEEEEEEEGGGCHHHHHTTCCSCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSC-
T ss_pred HHHHHhcCCCEEEEEEEcCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCc-
Confidence 75321 111 112235878776 68999999999988655 578899999999999998765
Q ss_pred cCCCcccCcCCC
Q 018416 295 QGLGFALAVSQK 306 (356)
Q Consensus 295 ~~~~yap~~~~~ 306 (356)
.++|++++.
T Consensus 454 ---~~~Pt~~e~ 462 (482)
T 1ojt_A 454 ---HPHPTLGES 462 (482)
T ss_dssp ---CCSSSSTTH
T ss_pred ---cCCCCHHHH
Confidence 788998865
No 21
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=6.1e-38 Score=313.84 Aligned_cols=276 Identities=19% Similarity=0.213 Sum_probs=222.5
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|..+++||.+..++++..+..+ + . ..+++++|||+|++|+|+|..|++.|.+||++++.+++++. +|+++
T Consensus 155 ~p~~p~i~g~~~~~v~~~~~~~~---~----~-~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~ 225 (499)
T 1xdi_A 155 SPRILPSAQPDGERILTWRQLYD---L----D-ALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY-EDADA 225 (499)
T ss_dssp EECCCGGGCCCSSSEEEGGGGGG---C----S-SCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC-SSHHH
T ss_pred CCCCCCCCCCCcCcEEehhHhhh---h----h-ccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHH
Confidence 46677888987777876554322 1 1 24799999999999999999999999999999999999997 89999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchh--hhc-cccc-ccCcEEEec
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSL--FEG-QLTL-EKGGIKVTG 159 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l--~~~-~l~~-~~g~I~vd~ 159 (356)
.+.+.+.|+++||+++++++|++++.++ +.+ .+++.+|+++++|.||+|+|++||+++ ++. ++.. ++|+|.||+
T Consensus 226 ~~~l~~~l~~~GV~i~~~~~V~~i~~~~-~~v-~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~ 303 (499)
T 1xdi_A 226 ALVLEESFAERGVRLFKNARAASVTRTG-AGV-LVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDR 303 (499)
T ss_dssp HHHHHHHHHHTTCEEETTCCEEEEEECS-SSE-EEEETTSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCS
T ss_pred HHHHHHHHHHCCCEEEeCCEEEEEEEeC-CEE-EEEECCCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECC
Confidence 9999999999999999999999998743 333 577788899999999999999999987 444 3665 458899999
Q ss_pred ccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCC-CCCCCCCCCeEEEEecCceEEEeecccce
Q 018416 160 RLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPD-KTDKFDYLPFFYSRVFTLSWQFYGDNVGE 238 (356)
Q Consensus 160 ~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~~~~~~G~~~~~ 238 (356)
+|||+.|+|||+|||+..+ .++..|..||+.+|.||+|.. ....+..+|+ ..+++..++++|+++.+
T Consensus 304 ~~~t~~~~IyA~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~--~~~~~~~~a~vG~~e~~ 371 (499)
T 1xdi_A 304 VSRTLATGIYAAGDCTGLL----------PLASVAAMQGRIAMYHALGEGVSPIRLRTVAA--TVFTRPEIAAVGVPQSV 371 (499)
T ss_dssp SSBCSSTTEEECSGGGTSC----------SCHHHHHHHHHHHHHHHTTCCCCCCCGGGCEE--EECSSSEEEEEESCHHH
T ss_pred CcccCCCCEEEEeccCCCc----------ccHHHHHHHHHHHHHHhcCCCCccCCCCCCcE--EEEecCCceEeCCCHHH
Confidence 9999999999999999754 356789999999999999863 2234555665 55788999999998754
Q ss_pred EE------EEc------------cCCCCceEEEEee--CCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcCcHHHHhhcCC
Q 018416 239 VV------HYG------------NFSGTTFGAYWVN--KGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELETQGL 297 (356)
Q Consensus 239 ~~------~~g------------~~~~~~~~~~~~~--~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~~~~ 297 (356)
+. ..+ ..+..+|.+++.+ +|+|+|++++|+.+.+ ++.++.||++++|++||.++.
T Consensus 372 a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~---- 447 (499)
T 1xdi_A 372 IDAGSVAARTIMLPLRTNARAKMSEMRHGFVKIFCRRSTGVVIGGVVVAPIASELILPIAVAVQNRITVNELAQTL---- 447 (499)
T ss_dssp HHHTSSCEEEEEEESTTSHHHHHTTCSSCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSB----
T ss_pred HHhCCCCEEEEEEecCcccceeecCCCceEEEEEEECCCCEEEEEEEECCchHHHHHHHHHHHHCCCCHHHHhccc----
Confidence 21 100 1122357777764 7999999999998765 578899999999999998755
Q ss_pred CcccCcCCC
Q 018416 298 GFALAVSQK 306 (356)
Q Consensus 298 ~yap~~~~~ 306 (356)
.++|++++.
T Consensus 448 ~~~Pt~~e~ 456 (499)
T 1xdi_A 448 AVYPSLSGS 456 (499)
T ss_dssp CCSSSTHHH
T ss_pred ccCCCchHH
Confidence 566888775
No 22
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-37 Score=309.17 Aligned_cols=276 Identities=16% Similarity=0.202 Sum_probs=218.6
Q ss_pred CCccC-CCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHH
Q 018416 4 KLEEF-GLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPK 82 (356)
Q Consensus 4 ~p~~~-~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~ 82 (356)
+|+.+ ++||.+ .++ +.++...+ . ..+++++|||+|++|+|+|..|+++|.+||++++.+++++. +|++
T Consensus 159 ~p~~p~~i~g~~--~~~---~~~~~~~l----~-~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~ 227 (479)
T 2hqm_A 159 KAIFPENIPGFE--LGT---DSDGFFRL----E-EQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK-FDEC 227 (479)
T ss_dssp EECCCTTSTTGG--GSB---CHHHHHHC----S-SCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHH
T ss_pred CCCCCCCCCCcc--ccc---chHHHhcc----c-ccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc-cCHH
Confidence 46667 788874 232 34444332 2 25799999999999999999999999999999999999987 8999
Q ss_pred HHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCC-cEEecCeEEEecCCCCCchh-hhc-cccc-ccCcEEEe
Q 018416 83 IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG-NRLPTDMVVVGIGIRPNTSL-FEG-QLTL-EKGGIKVT 158 (356)
Q Consensus 83 ~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g-~~i~~D~vi~a~G~~p~~~l-~~~-~l~~-~~g~I~vd 158 (356)
+.+.+.+.|++.||++++++++++++.++++.+..+++++| +++++|.||+|+|++||+.| ++. ++.. ++|+|.||
T Consensus 228 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~l~l~~~gl~~~~~G~i~vd 307 (479)
T 2hqm_A 228 IQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHLGMGSENVGIKLNSHDQIIAD 307 (479)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECCCSSGGGGTCCBCTTSCBCCC
T ss_pred HHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCccccChhhcCceECCCCCEeEC
Confidence 99999999999999999999999998744453456788899 78999999999999999976 444 3666 57899999
Q ss_pred cccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCC---C-CCCCCCCCeEEEEecCceEEEeec
Q 018416 159 GRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPD---K-TDKFDYLPFFYSRVFTLSWQFYGD 234 (356)
Q Consensus 159 ~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~---~-~~~~~~~p~~~~~~~~~~~~~~G~ 234 (356)
++|||+.|+|||+|||+..+ .++..|.+||+.+|.||++.. . ...+..+|+. .+++..++++|+
T Consensus 308 ~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~p~~--~~~~~~~~~vGl 375 (479)
T 2hqm_A 308 EYQNTNVPNIYSLGDVVGKV----------ELTPVAIAAGRKLSNRLFGPEKFRNDKLDYENVPSV--IFSHPEAGSIGI 375 (479)
T ss_dssp TTCBCSSTTEEECGGGTTSS----------CCHHHHHHHHHHHHHHHHSCGGGTTCCCCCTTCCEE--ECCSSCEEEEEC
T ss_pred CCCccCCCCEEEEEecCCCc----------ccHHHHHHHHHHHHHHhcCCCccCcccCCCCCCCeE--EECCCCeEEEeC
Confidence 99999999999999997643 457789999999999999754 2 1344557753 346788999998
Q ss_pred ccceEE--------EEc------------cCCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcCcHHH
Q 018416 235 NVGEVV--------HYG------------NFSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAE 291 (356)
Q Consensus 235 ~~~~~~--------~~g------------~~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~ 291 (356)
++.++. ... .....+|.|+.. ++|+|+|+|++|+.+.+ ++.++.||++++|++||.+
T Consensus 376 ~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~ 455 (479)
T 2hqm_A 376 SEKEAIEKYGKENIKVYNSKFTAMYYAMLSEKSPTRYKIVCAGPNEKVVGLHIVGDSSAEILQGFGVAIKMGATKADFDN 455 (479)
T ss_dssp CHHHHHHHHCGGGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHT
T ss_pred CHHHHHhcCCCCcEEEEEEeccHHHHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhh
Confidence 764321 111 111234777665 57999999999988665 5778999999999999987
Q ss_pred HhhcCCCcccCcCCC
Q 018416 292 LETQGLGFALAVSQK 306 (356)
Q Consensus 292 l~~~~~~yap~~~~~ 306 (356)
+. .++|++++.
T Consensus 456 ~~----~~hPt~~e~ 466 (479)
T 2hqm_A 456 CV----AIHPTSAEE 466 (479)
T ss_dssp SC----CCSSCSGGG
T ss_pred Cc----CCCCChHHH
Confidence 65 788888876
No 23
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=2.5e-37 Score=306.91 Aligned_cols=276 Identities=20% Similarity=0.242 Sum_probs=219.1
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|..+++||.+.++++ +.+++..+. ..+++++|||+|++|+|+|..|++.|.+||++++.+++++. +|+++
T Consensus 147 ~p~~p~~~g~~~~~v~---t~~~~~~~~-----~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~ 217 (468)
T 2qae_A 147 EPTELPFLPFDEKVVL---SSTGALALP-----RVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT-LDEDV 217 (468)
T ss_dssp EECCBTTBCCCSSSEE---CHHHHHTCS-----SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHH
T ss_pred CcCCCCCCCCCcCcee---chHHHhhcc-----cCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc-CCHHH
Confidence 4677788887766665 445554432 15799999999999999999999999999999999999996 89999
Q ss_pred HHHHHHHH-HhCCCEEEeCCeeeEEEEcCCCcEEEEEeC--CC--cEEecCeEEEecCCCCCchh--hhc-cccc-ccCc
Q 018416 84 ASYYEEYY-KSKGVKFVKGTVLSSFDVDSNGKVVAVNLR--DG--NRLPTDMVVVGIGIRPNTSL--FEG-QLTL-EKGG 154 (356)
Q Consensus 84 ~~~~~~~l-~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~--~g--~~i~~D~vi~a~G~~p~~~l--~~~-~l~~-~~g~ 154 (356)
.+.+.+.| +++||++++++++++++.++++ ..+.+. +| +++++|.|++|+|++||+++ ++. ++.. ++|+
T Consensus 218 ~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~ 295 (468)
T 2qae_A 218 TNALVGALAKNEKMKFMTSTKVVGGTNNGDS--VSLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGF 295 (468)
T ss_dssp HHHHHHHHHHHTCCEEECSCEEEEEEECSSS--EEEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSC
T ss_pred HHHHHHHHhhcCCcEEEeCCEEEEEEEcCCe--EEEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCC
Confidence 99999999 9999999999999999874333 345554 66 67999999999999999986 443 3665 4688
Q ss_pred EEEecccccCCCCEEEEccccc-cCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEee
Q 018416 155 IKVTGRLQSSNSSVYAVGDVAA-FPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYG 233 (356)
Q Consensus 155 I~vd~~l~ts~~~VyAiGD~~~-~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G 233 (356)
|.||++|||+.|+|||+|||+. .+ .++..|.+||+.||.||++......+..+| +..+++..++++|
T Consensus 296 i~vd~~~~t~~~~IyA~GD~~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p--~~~~~~~~~a~vG 363 (468)
T 2qae_A 296 VKIGDHFETSIPDVYAIGDVVDKGP----------MLAHKAEDEGVACAEILAGKPGHVNYGVIP--AVIYTMPEVASVG 363 (468)
T ss_dssp BCCCTTSBCSSTTEEECGGGBSSSC----------SCHHHHHHHHHHHHHHHTTCCCCCCTTSCC--EEECSSSEEEEEE
T ss_pred EeECCCcccCCCCEEEeeccCCCCC----------ccHhHHHHHHHHHHHHHcCCCccCCCCCCC--EEEECCCceEEEe
Confidence 9999999999999999999998 33 357789999999999999865333455566 4567888999999
Q ss_pred cccceEE------EEc------------cCCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcCcHHHH
Q 018416 234 DNVGEVV------HYG------------NFSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAEL 292 (356)
Q Consensus 234 ~~~~~~~------~~g------------~~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l 292 (356)
+++.++. ..+ ..+..+|.+++. ++|+|+|++++|+.+.+ ++.++.||++++|++||.++
T Consensus 364 ~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~ 443 (468)
T 2qae_A 364 KSEDELKKEGVAYKVGKFPFNANSRAKAVSTEDGFVKVLVDKATDRILGVHIVCTTAGELIGEACLAMEYGASSEDVGRT 443 (468)
T ss_dssp CCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTS
T ss_pred CCHHHHHhcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhc
Confidence 8875321 110 112245877776 48999999999988665 67889999999999999875
Q ss_pred hhcCCCcccCcCCC
Q 018416 293 ETQGLGFALAVSQK 306 (356)
Q Consensus 293 ~~~~~~yap~~~~~ 306 (356)
. .++|++++.
T Consensus 444 ~----~~~Pt~~e~ 453 (468)
T 2qae_A 444 C----HAHPTMSEA 453 (468)
T ss_dssp C----CCSSCTHHH
T ss_pred c----cCCCCHHHH
Confidence 5 566888765
No 24
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=2.1e-37 Score=309.76 Aligned_cols=275 Identities=17% Similarity=0.240 Sum_probs=219.8
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHC---CCcEEEEeeCCccCCccCC
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVIN---KINVTMVFPEAHCMARLFT 80 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~---G~~Vtlv~~~~~~l~~~~d 80 (356)
+|..+++||.+ ++++ .+++..+ . ..+++++|||+|++|+|+|..|+++ |.+||++++.+++++. +|
T Consensus 166 ~p~~p~i~G~~--~~~~---~~~~~~~----~-~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~-~d 234 (495)
T 2wpf_A 166 WPQMPAIPGIE--HCIS---SNEAFYL----P-EPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG-FD 234 (495)
T ss_dssp EECCCCCTTGG--GCEE---HHHHTTC----S-SCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT-SC
T ss_pred CcCCCCCCCcc--cccc---HHHHHhh----h-hcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc-cC
Confidence 46777888874 4443 3344332 1 2578999999999999999999999 9999999999999987 89
Q ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchh--hhc-cccc-ccCcEE
Q 018416 81 PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSL--FEG-QLTL-EKGGIK 156 (356)
Q Consensus 81 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l--~~~-~l~~-~~g~I~ 156 (356)
+++.+.+.+.|+++||+++++++|++++.++++. ..+++.+|+++++|.||+++|++||+++ ++. ++.. ++|+|.
T Consensus 235 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~ 313 (495)
T 2wpf_A 235 ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGS-KHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQ 313 (495)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCce-EEEEECCCcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEE
Confidence 9999999999999999999999999998743333 4678889999999999999999999983 333 3665 478899
Q ss_pred EecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCC-CCCCCCCCeEEEEecCceEEEeecc
Q 018416 157 VTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDK-TDKFDYLPFFYSRVFTLSWQFYGDN 235 (356)
Q Consensus 157 vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~-~~~~~~~p~~~~~~~~~~~~~~G~~ 235 (356)
||++|||+.|+|||+|||+..+ .++..|.+||+.||.||++... ...+..+| +..+++..++++|++
T Consensus 314 Vd~~~~t~~~~IyA~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p--~~~~~~~~~a~vGl~ 381 (495)
T 2wpf_A 314 VDEFSRTNVPNIYAIGDITDRL----------MLTPVAINEGAALVDTVFGNKPRKTDHTRVA--SAVFSIPPIGTCGLI 381 (495)
T ss_dssp CCTTCBCSSTTEEECGGGGCSC----------CCHHHHHHHHHHHHHHHHSSCCCCCCCSSCE--EEECCSSCEEEEECC
T ss_pred ECCCCccCCCCEEEEeccCCCc----------cCHHHHHHHHHHHHHHhcCCCCCcCCCCCCC--EEEECCCCeEEEeCC
Confidence 9999999999999999999643 4678899999999999998542 13444455 455678899999988
Q ss_pred cceE------EEEc------------cCCCCce-EEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcCcHHHHh
Q 018416 236 VGEV------VHYG------------NFSGTTF-GAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELE 293 (356)
Q Consensus 236 ~~~~------~~~g------------~~~~~~~-~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~ 293 (356)
+.++ +... ..+..+| .|+.. ++|+|+|+|++|+.+.+ ++.++.||++++|++||.++.
T Consensus 382 e~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~ 461 (495)
T 2wpf_A 382 EEVAAKEFEKVAVYMSSFTPLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTI 461 (495)
T ss_dssp HHHHHHHSSEEEEEEEEECCTHHHHHSCTTCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSC
T ss_pred HHHHHhcCCCEEEEEEecCchhhhhhcCCCcEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcc
Confidence 6532 1110 1123458 88776 48999999999988665 678899999999999998754
Q ss_pred hcCCCcccCcCCC
Q 018416 294 TQGLGFALAVSQK 306 (356)
Q Consensus 294 ~~~~~yap~~~~~ 306 (356)
.++|++++.
T Consensus 462 ----~~hPt~~e~ 470 (495)
T 2wpf_A 462 ----GVHPTSAEE 470 (495)
T ss_dssp ----CCSSCSGGG
T ss_pred ----cCCCChHHH
Confidence 788988887
No 25
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.4e-37 Score=306.03 Aligned_cols=275 Identities=21% Similarity=0.261 Sum_probs=217.2
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|..+++||.+.. + .+..++..+ . ..+++++|||+|++|+|+|..|+++|.+||++++.+++++. +++++
T Consensus 144 ~p~~~~~~g~~~~-v---~~~~~~~~~----~-~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~ 213 (455)
T 1ebd_A 144 RPIELPNFKFSNR-I---LDSTGALNL----G-EVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG-FEKQM 213 (455)
T ss_dssp EECCBTTBCCCSS-E---ECHHHHHTC----S-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-SCHHH
T ss_pred CCCCCCCCCccce-E---ecHHHHhcc----c-cCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-cCHHH
Confidence 4667778887533 3 355555432 1 24799999999999999999999999999999999999996 89999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeC---CCcEEecCeEEEecCCCCCchh--hhc-cccc-ccCcEE
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR---DGNRLPTDMVVVGIGIRPNTSL--FEG-QLTL-EKGGIK 156 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~---~g~~i~~D~vi~a~G~~p~~~l--~~~-~l~~-~~g~I~ 156 (356)
.+.+.+.|+++||++++++++++++.++++ ..+++. +++++++|.|++++|++|++++ ++. ++.. ++|+|.
T Consensus 214 ~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~ 291 (455)
T 1ebd_A 214 AAIIKKRLKKKGVEVVTNALAKGAEEREDG--VTVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIE 291 (455)
T ss_dssp HHHHHHHHHHTTCEEEESEEEEEEEEETTE--EEEEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBC
T ss_pred HHHHHHHHHHCCCEEEeCCEEEEEEEeCCe--EEEEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEe
Confidence 999999999999999999999999863332 234443 4568999999999999999986 443 3655 468899
Q ss_pred EecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeeccc
Q 018416 157 VTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNV 236 (356)
Q Consensus 157 vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~ 236 (356)
||++|||+.|+|||+|||+..+ .++..|..||+.||.||++......+..+| +..+++..++++|+++
T Consensus 292 vd~~~~t~~~~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p--~~~~~~~~~a~vG~~e 359 (455)
T 1ebd_A 292 VDQQCRTSVPNIFAIGDIVPGP----------ALAHKASYEGKVAAEAIAGHPSAVDYVAIP--AVVFSDPECASVGYFE 359 (455)
T ss_dssp CCTTCBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHTSCCCCCCCSCCC--EEECSSSCEEEEECCH
T ss_pred eCCCcccCCCCEEEEeccCCCc----------ccHHHHHHHHHHHHHHHcCCCccCCCCCCC--EEEECCCceEEEeCCH
Confidence 9999999999999999999754 356789999999999999865333445566 4567888999999887
Q ss_pred ceEE------EEc------------cCCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcCcHHHHhhc
Q 018416 237 GEVV------HYG------------NFSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELETQ 295 (356)
Q Consensus 237 ~~~~------~~g------------~~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~~ 295 (356)
.++. ..+ ..+..+|.+++. ++|+|+|+|++|+.+.+ ++.++.||++++|++||.++.
T Consensus 360 ~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~-- 437 (455)
T 1ebd_A 360 QQAKDEGIDVIAAKFPFAANGRALALNDTDGFLKLVVRKEDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTI-- 437 (455)
T ss_dssp HHHHTTTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHHTCBHHHHHHSC--
T ss_pred HHHHhcCCCEEEEEEEcCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEeCCCHHHHHHHHHHHHHCCCCHHHHhhcc--
Confidence 5321 111 112345877766 48999999999988655 678899999999999998765
Q ss_pred CCCcccCcCCC
Q 018416 296 GLGFALAVSQK 306 (356)
Q Consensus 296 ~~~yap~~~~~ 306 (356)
.++|++++.
T Consensus 438 --~~~Pt~~e~ 446 (455)
T 1ebd_A 438 --HAHPTLGEI 446 (455)
T ss_dssp --CCTTSSTHH
T ss_pred --cCCCCHHHH
Confidence 667888764
No 26
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=3e-37 Score=308.23 Aligned_cols=275 Identities=17% Similarity=0.262 Sum_probs=220.2
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHC---CCcEEEEeeCCccCCccCC
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVIN---KINVTMVFPEAHCMARLFT 80 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~---G~~Vtlv~~~~~~l~~~~d 80 (356)
+|..+++||.+ ++ .+.+++..+ . ..+++++|||+|++|+|+|..|+++ |.+||++++.+++++. +|
T Consensus 162 ~p~~p~i~g~~--~~---~~~~~~~~~----~-~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~-~d 230 (490)
T 1fec_A 162 WPQHLGIEGDD--LC---ITSNEAFYL----D-EAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG-FD 230 (490)
T ss_dssp EECCCCSBTGG--GC---BCHHHHTTC----S-SCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT-SC
T ss_pred CCCCCCCCCcc--ce---ecHHHHhhh----h-hcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc-cC
Confidence 46677788873 33 344454332 1 2578999999999999999999999 9999999999999987 89
Q ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCch-h-hhc-cccc-ccCcEE
Q 018416 81 PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS-L-FEG-QLTL-EKGGIK 156 (356)
Q Consensus 81 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~-l-~~~-~l~~-~~g~I~ 156 (356)
+++.+.+.+.|+++||++++++++++++.++++. ..+++.+|+++++|.||+|+|++|+++ + ++. ++.. ++|+|.
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~ 309 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKNADGT-RHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIK 309 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCE-EEEEECCCcEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEE
Confidence 9999999999999999999999999998743333 467788998999999999999999997 3 343 3666 478899
Q ss_pred EecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCC-CCCCCCCCeEEEEecCceEEEeecc
Q 018416 157 VTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDK-TDKFDYLPFFYSRVFTLSWQFYGDN 235 (356)
Q Consensus 157 vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~-~~~~~~~p~~~~~~~~~~~~~~G~~ 235 (356)
||++|||+.|+|||+|||+..+ .++..|.+||+.+|.||++... ...+..+| +..+++..++++|++
T Consensus 310 Vd~~~~t~~~~IyA~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p--~~~~~~~~~a~vG~~ 377 (490)
T 1fec_A 310 VDAYSKTNVDNIYAIGDVTDRV----------MLTPVAINEGAAFVDTVFANKPRATDHTKVA--CAVFSIPPMGVCGYV 377 (490)
T ss_dssp CCTTCBCSSTTEEECGGGGCSC----------CCHHHHHHHHHHHHHHHHSSCCCCCCCSSCC--EEECCSSCEEEEECC
T ss_pred ECCCCccCCCCEEEEeccCCCc----------cCHHHHHHHHHHHHHHhcCCCCCcCCCCCcc--EEEECCCCeEEEeCC
Confidence 9999999999999999999642 4678899999999999998542 23455566 455678899999988
Q ss_pred cceEE------EEc------------cCCCCceE-EEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcCcHHHHh
Q 018416 236 VGEVV------HYG------------NFSGTTFG-AYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELE 293 (356)
Q Consensus 236 ~~~~~------~~g------------~~~~~~~~-~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~ 293 (356)
+.++. ... .....+|. |+.. ++|+|+|+|++|+.+.+ ++.++.||++++|++||.++
T Consensus 378 e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~- 456 (490)
T 1fec_A 378 EEDAAKKYDQVAVYESSFTPLMHNISGSTYKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNT- 456 (490)
T ss_dssp HHHHHHHCSEEEEEEEEECCHHHHHHSCTTCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTS-
T ss_pred HHHHHhcCCCEEEEEeecChhhhhhhcCCCeEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhcc-
Confidence 75321 110 11234577 8776 48999999999988665 57889999999999999775
Q ss_pred hcCCCcccCcCCC
Q 018416 294 TQGLGFALAVSQK 306 (356)
Q Consensus 294 ~~~~~yap~~~~~ 306 (356)
+.++|++++.
T Consensus 457 ---~~~hPt~~e~ 466 (490)
T 1fec_A 457 ---IGVHPTSAEE 466 (490)
T ss_dssp ---CCCSSCSGGG
T ss_pred ---ccCCCCHHHH
Confidence 4788998887
No 27
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=5.6e-37 Score=307.00 Aligned_cols=284 Identities=15% Similarity=0.189 Sum_probs=220.1
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|..+++||.+ .+++ .+++..+ + .+++++|||+|++|+|+|..|+++|.+||++++.+++++. +|+++
T Consensus 152 ~p~~p~i~G~~--~~~~---~~~~~~~----~--~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~ 219 (500)
T 1onf_A 152 KPVFPPVKGIE--NTIS---SDEFFNI----K--ESKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK-FDESV 219 (500)
T ss_dssp CBCCCSCTTGG--GCEE---HHHHTTC----C--CCSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT-SCHHH
T ss_pred CCCCCCCCCCC--cccC---HHHHhcc----C--CCCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc-cchhh
Confidence 57777888874 3443 3343322 2 2799999999999999999999999999999999999986 89999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcE-EecCeEEEecCCCCCch-h-hhc-ccccccCcEEEec
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNR-LPTDMVVVGIGIRPNTS-L-FEG-QLTLEKGGIKVTG 159 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~-i~~D~vi~a~G~~p~~~-l-~~~-~l~~~~g~I~vd~ 159 (356)
.+.+.+.|+++||++++++++++++.++++. ..+++++|++ +++|.|++++|++|+++ | ++. ++..++|+|.||+
T Consensus 220 ~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~G~i~vd~ 298 (500)
T 1onf_A 220 INVLENDMKKNNINIVTFADVVEIKKVSDKN-LSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVETNNNYIVVDE 298 (500)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEESSTTC-EEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCBSSSCEEECT
T ss_pred HHHHHHHHHhCCCEEEECCEEEEEEEcCCce-EEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCccccCCEEEECC
Confidence 9999999999999999999999998744443 4577889988 99999999999999996 4 343 3555678899999
Q ss_pred ccccCCCCEEEEccccccCccc-----------------------cC-cccccccHHHHHHHHHHHHHHHcCCCC-CCCC
Q 018416 160 RLQSSNSSVYAVGDVAAFPLKL-----------------------LG-ETRRLEHVDSARKSAKHAVAAIMEPDK-TDKF 214 (356)
Q Consensus 160 ~l~ts~~~VyAiGD~~~~~~~~-----------------------~g-~~~~~~~~~~A~~~g~~aa~~i~g~~~-~~~~ 214 (356)
++||+.|+|||+|||+..++.. ++ ......++..|.+||+.||+||++... ...+
T Consensus 299 ~~~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~ 378 (500)
T 1onf_A 299 NQRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLKKTRKTNY 378 (500)
T ss_dssp TCBCSSSSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHSCTTCCCCC
T ss_pred CcccCCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhCCCCccCCC
Confidence 9999999999999999542110 00 002356889999999999999998542 2345
Q ss_pred CCCCeEEEEecCceEEEeecccceEEE--------E----------------ccCCCCceEEEEe--eCCeEEEEEEeCC
Q 018416 215 DYLPFFYSRVFTLSWQFYGDNVGEVVH--------Y----------------GNFSGTTFGAYWV--NKGRLVGSFLEGG 268 (356)
Q Consensus 215 ~~~p~~~~~~~~~~~~~~G~~~~~~~~--------~----------------g~~~~~~~~~~~~--~~g~ilGa~~vg~ 268 (356)
..+|++ .+++..++++|+++.++.. . ......+|.|+.+ ++|+|+|+|++|+
T Consensus 379 ~~~p~~--~~~~~~~a~vGl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~ 456 (500)
T 1onf_A 379 KLIPTV--IFSHPPIGTIGLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIEPELKEKTYLKLVCVGKDELIKGLHIIGL 456 (500)
T ss_dssp SSCCEE--ECCSSCEEEEECCHHHHHHHTCGGGEEEEEEEECCGGGTTSCSCGGGSCCEEEEEEEETTTTEEEEEEEEST
T ss_pred CCCCeE--EEcCcceEEEeCCHHHHHhcCCCccEEEEEEECchhhhhhccccccCCCceEEEEEEECCCCEEEEEEEECC
Confidence 567754 4578889999988643211 1 0011234777665 6899999999998
Q ss_pred CHHH-HHHHHHHHHcCCCcCcHHHHhhcCCCcccCcCCC
Q 018416 269 TKEE-YEAIAKATRLQPVVEDLAELETQGLGFALAVSQK 306 (356)
Q Consensus 269 ~~~~-~~~~a~ai~~~~~~~dl~~l~~~~~~yap~~~~~ 306 (356)
.+.+ ++.++.||++++|++||.++. .++|++++.
T Consensus 457 ~a~~~i~~~~~ai~~~~t~~~l~~~~----~~~Pt~~e~ 491 (500)
T 1onf_A 457 NADEIVQGFAVALKMNATKKDFDETI----PIHPTAAEE 491 (500)
T ss_dssp THHHHHHHHHHHHHTTCBHHHHHTSC----CCTTCSTTH
T ss_pred CHHHHHHHHHHHHHcCCCHHHHhccc----cCCCCHHHH
Confidence 7655 678899999999999998765 788888875
No 28
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=1.6e-37 Score=312.73 Aligned_cols=250 Identities=20% Similarity=0.275 Sum_probs=194.4
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEE
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVA 117 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~ 117 (356)
.|++++|||||+||+|+|..|+++|.+||++++ +++++. +|+++++.+++.|+++||++++++.+++++..+ +. ..
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~-~~~L~~-~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~-~~-~~ 297 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVR-SIVLRG-FDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMD-DK-IL 297 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEES-SCSSTT-SCHHHHHHHHHHHHHTTCEEEETCCEEEEEEET-TE-EE
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEEecc-cccccc-cchhHHHHHHHHHHhhcceeecceEEEEEEecC-Ce-EE
Confidence 589999999999999999999999999999987 567886 899999999999999999999999999998743 33 45
Q ss_pred EEeCCCcEEecCeEEEecCCCCCchhhhc---cccc-ccCc-EEEecccccCCCCEEEEccccccCccccCcccccccHH
Q 018416 118 VNLRDGNRLPTDMVVVGIGIRPNTSLFEG---QLTL-EKGG-IKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVD 192 (356)
Q Consensus 118 v~~~~g~~i~~D~vi~a~G~~p~~~l~~~---~l~~-~~g~-I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~ 192 (356)
+.+.+++++.+|.|++|+|++||++.+.. ++.. .+++ |.+|++||||+|+|||+|||+.... .+..
T Consensus 298 v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~Ts~p~IyAiGDv~~~~p---------~La~ 368 (542)
T 4b1b_A 298 VEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFAVGDVAENVP---------ELAP 368 (542)
T ss_dssp EEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSBCSSTTEEECTTSBTTCC---------CCHH
T ss_pred EEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEeccccccccCCCeEEeccccCCch---------hHHH
Confidence 78889999999999999999999986542 3444 3344 6889999999999999999996431 3577
Q ss_pred HHHHHHHHHHHHHcCCCCC-CCCCCCCeEEEEecCceEEEeecccceEEEEc----------------------------
Q 018416 193 SARKSAKHAVAAIMEPDKT-DKFDYLPFFYSRVFTLSWQFYGDNVGEVVHYG---------------------------- 243 (356)
Q Consensus 193 ~A~~~g~~aa~~i~g~~~~-~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~g---------------------------- 243 (356)
.|.+||+++++|+++.... ..+..+|+. .++++.++++|+++.++...+
T Consensus 369 ~A~~eg~~aa~~i~g~~~~~~d~~~iP~~--vft~PeiA~VGlTE~eA~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 446 (542)
T 4b1b_A 369 VAIKAGEILARRLFKDSDEIMDYSYIPTS--IYTPIEYGACGYSEEKAYELYGKSNVEVFLQEFNNLEISAVHRQKHIRA 446 (542)
T ss_dssp HHHHHHHHHHHHHHSCCCCCCCCSSCCEE--ECSSSCEEEEECCHHHHHHHHCTTTEEEEEC------------------
T ss_pred HHHHHHHHHHHHHhcCCCcccCCCCCceE--EeCCCCeEEEeCCHHHHHHhCCCCcEEEEEeeccchhhhhhhhhhhhhc
Confidence 8999999999999987543 456678854 457788999999876532110
Q ss_pred -------cCCCCceEEEEe---eCCeEEEEEEeCCCHHHH-HHHHHHHHcCCCcCcHHHHhhcCCCcccCcCCC
Q 018416 244 -------NFSGTTFGAYWV---NKGRLVGSFLEGGTKEEY-EAIAKATRLQPVVEDLAELETQGLGFALAVSQK 306 (356)
Q Consensus 244 -------~~~~~~~~~~~~---~~g~ilGa~~vg~~~~~~-~~~a~ai~~~~~~~dl~~l~~~~~~yap~~~~~ 306 (356)
+.+..+|.++.. ++|+|||+|++|+++.++ +.++.||++++|++||.++. ..+|+++++
T Consensus 447 ~~~~~~~~~~~~g~vKli~~~~~t~~ILGa~ivG~~A~ElI~~~alAi~~~~t~~dl~~~i----~~HPTlsE~ 516 (542)
T 4b1b_A 447 QKDEYDLDVSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEVTQGMALALRLKVKKKDFDNCI----GIHPTDAES 516 (542)
T ss_dssp -----------CCCEEEEEETTTTTBEEEEEEESTTHHHHHHHHHHHHHTCCBHHHHHHC--------------
T ss_pred ccccccccCCCceEEEEEEEeCCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhccC----CcCCCHHHH
Confidence 001123556543 579999999999987765 67899999999999999876 566888777
No 29
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=6.2e-37 Score=302.80 Aligned_cols=275 Identities=16% Similarity=0.197 Sum_probs=217.9
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|..+++||.+ .+ .+.+++..+ . ..+++++|||+|++|+|+|..|+++|.+||++++.+++++. +|+++
T Consensus 142 ~p~~p~i~g~~--~~---~~~~~~~~~----~-~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~ 210 (450)
T 1ges_A 142 RPSHPDIPGVE--YG---IDSDGFFAL----P-ALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS-FDPMI 210 (450)
T ss_dssp EECCCCSTTGG--GS---BCHHHHHHC----S-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHH
T ss_pred CCCCCCCCCcc--ce---ecHHHhhhh----h-hcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh-hhHHH
Confidence 46777888874 33 345555433 2 25799999999999999999999999999999999999986 89999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCch-h-hhc-cccc-ccCcEEEec
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS-L-FEG-QLTL-EKGGIKVTG 159 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~-l-~~~-~l~~-~~g~I~vd~ 159 (356)
.+.+.+.|++.||++++++++++++.++++. ..+++++|+++++|.|++|+|++|+++ + ++. ++.. ++|+|.||+
T Consensus 211 ~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~ 289 (450)
T 1ges_A 211 SETLVEVMNAEGPQLHTNAIPKAVVKNTDGS-LTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDK 289 (450)
T ss_dssp HHHHHHHHHHHSCEEECSCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCT
T ss_pred HHHHHHHHHHCCCEEEeCCEEEEEEEeCCcE-EEEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECC
Confidence 9999999999999999999999998743343 357788999999999999999999997 3 333 4665 578899999
Q ss_pred ccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCC--CCCCCCCeEEEEecCceEEEeecccc
Q 018416 160 RLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKT--DKFDYLPFFYSRVFTLSWQFYGDNVG 237 (356)
Q Consensus 160 ~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~--~~~~~~p~~~~~~~~~~~~~~G~~~~ 237 (356)
+|||+.|+|||+|||+..+ .++..|.+||+.+|.||++.... ..+..+|+. .+++..++++|+++.
T Consensus 290 ~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~--~~~~~~~a~vG~~e~ 357 (450)
T 1ges_A 290 YQNTNIEGIYAVGDNTGAV----------ELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTV--VFSHPPIGTVGLTEP 357 (450)
T ss_dssp TSBCSSTTEEECSGGGTSC----------CCHHHHHHHHHHHHHHHHTTCTTCCCCCSSCCEE--ECCSSCEEEEECCHH
T ss_pred CCccCCCCEEEEeccCCCC----------ccHHHHHHHHHHHHHHHcCCCCcccCCCCCCCeE--EECCCceEEEeCCHH
Confidence 9999999999999998643 45778999999999999985422 245567754 446788999998764
Q ss_pred eEEEE--------c------------cCCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcCcHHHHhh
Q 018416 238 EVVHY--------G------------NFSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELET 294 (356)
Q Consensus 238 ~~~~~--------g------------~~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~ 294 (356)
++... . .....+|.++.. ++|+|+|+|++|+.+.+ ++.++.||++++|++||.++.
T Consensus 358 ~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~- 436 (450)
T 1ges_A 358 QAREQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTV- 436 (450)
T ss_dssp HHHHHHCGGGEEEEEEEEECHHHHTSSSCCEEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSC-
T ss_pred HHHhcCCCCcEEEEEEECchhhHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCc-
Confidence 33211 0 111224766655 58999999999988665 578899999999999998765
Q ss_pred cCCCcccCcCCC
Q 018416 295 QGLGFALAVSQK 306 (356)
Q Consensus 295 ~~~~yap~~~~~ 306 (356)
.++|.+++.
T Consensus 437 ---~~hPt~~e~ 445 (450)
T 1ges_A 437 ---AIHPTAAEE 445 (450)
T ss_dssp ---CCSSCSGGG
T ss_pred ---cCCCChHHH
Confidence 678887775
No 30
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.7e-37 Score=306.66 Aligned_cols=276 Identities=21% Similarity=0.250 Sum_probs=218.7
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|..+++||.+.++++ +..++..+ . ..+++++|||+|++|+|+|..|++.|.+||++++.+++++. +++++
T Consensus 150 ~p~~p~~~g~~~~~v~---~~~~~~~~----~-~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~-~~~~~ 220 (470)
T 1dxl_A 150 DVKSLPGVTIDEKKIV---SSTGALAL----S-EIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT-MDAEI 220 (470)
T ss_dssp EECCBTTBCCCSSSEE---CHHHHTTC----S-SCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-SCHHH
T ss_pred CCCCCCCCCCCcccEE---eHHHhhhh----h-hcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-ccHHH
Confidence 4677788887655665 34444332 1 15799999999999999999999999999999999999996 89999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeC---CC--cEEecCeEEEecCCCCCchh--hhc-cccc-ccCc
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR---DG--NRLPTDMVVVGIGIRPNTSL--FEG-QLTL-EKGG 154 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~---~g--~~i~~D~vi~a~G~~p~~~l--~~~-~l~~-~~g~ 154 (356)
.+.+.+.|++.||++++++++++++.++++ ..+.+. +| +++++|.|++++|++||+++ ++. ++.. ++|+
T Consensus 221 ~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~ 298 (470)
T 1dxl_A 221 RKQFQRSLEKQGMKFKLKTKVVGVDTSGDG--VKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGR 298 (470)
T ss_dssp HHHHHHHHHHSSCCEECSEEEEEEECSSSS--EEEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSC
T ss_pred HHHHHHHHHHcCCEEEeCCEEEEEEEcCCe--EEEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCC
Confidence 999999999999999999999999864333 234443 44 67999999999999999987 443 3665 4688
Q ss_pred EEEecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeec
Q 018416 155 IKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGD 234 (356)
Q Consensus 155 I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~ 234 (356)
|.||++|||+.|+|||+|||+..+ .++..|.+||+.||.||++......+..+| +..+++..++++|+
T Consensus 299 i~vd~~~~t~~~~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p--~~~~~~~~~a~vG~ 366 (470)
T 1dxl_A 299 ILVNERFSTNVSGVYAIGDVIPGP----------MLAHKAEEDGVACVEYLAGKVGHVDYDKVP--GVVYTNPEVASVGK 366 (470)
T ss_dssp BCCCTTCBCSSTTEEECSTTSSSC----------CCHHHHHHHHHHHHHHHTTSCCCCCTTSCC--EEECSSSEEEEEEC
T ss_pred EeECcCCccCCCCEEEEeccCCCC----------ccHHHHHHHHHHHHHHHcCCCcCCCCCCCC--EEEECCCceEEEcC
Confidence 999999999999999999999754 357789999999999999865333445566 45678899999998
Q ss_pred ccceEE------EEc------------cCCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcCcHHHHh
Q 018416 235 NVGEVV------HYG------------NFSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELE 293 (356)
Q Consensus 235 ~~~~~~------~~g------------~~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~ 293 (356)
++.++. ..+ ..+..+|.+++. ++|+|+|++++|+.+.+ ++.++.||++++|++||.++.
T Consensus 367 ~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~ 446 (470)
T 1dxl_A 367 TEEQVKETGVEYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHEAAIALQYDASSEDIARVC 446 (470)
T ss_dssp CHHHHHHTTCCEEEEEEEGGGCHHHHHHSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSC
T ss_pred CHHHHHhcCCcEEEEEEecccchHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcc
Confidence 875321 110 112345877776 48999999999988655 578899999999999998755
Q ss_pred hcCCCcccCcCCC
Q 018416 294 TQGLGFALAVSQK 306 (356)
Q Consensus 294 ~~~~~yap~~~~~ 306 (356)
.++|++++.
T Consensus 447 ----~~~Pt~~e~ 455 (470)
T 1dxl_A 447 ----HAHPTMSEA 455 (470)
T ss_dssp ----CCSSCTTHH
T ss_pred ----cCCCChHHH
Confidence 666888765
No 31
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=4.9e-37 Score=305.54 Aligned_cols=275 Identities=19% Similarity=0.238 Sum_probs=215.8
Q ss_pred CCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHH
Q 018416 9 GLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYE 88 (356)
Q Consensus 9 ~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~ 88 (356)
.+||.+.++ ..+.+.+++..++ . .+++++|||+|++|+|+|..|+++|.+||++++.+++++. +|+++.+.+.
T Consensus 159 ~~~g~~~~~-~~v~~~~~~~~~~----~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~ 231 (478)
T 1v59_A 159 PFPGIEIDE-EKIVSSTGALSLK----E-IPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS-MDGEVAKATQ 231 (478)
T ss_dssp CCTTCCCCS-SSEECHHHHTTCS----S-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS-SCHHHHHHHH
T ss_pred CCCCCCCCC-ceEEcHHHHHhhh----c-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc-cCHHHHHHHH
Confidence 466665444 2344666665432 1 4799999999999999999999999999999999999995 8999999999
Q ss_pred HHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeC-----CCcEEecCeEEEecCCCCCch--hhhcc-ccc-ccCcEEEec
Q 018416 89 EYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR-----DGNRLPTDMVVVGIGIRPNTS--LFEGQ-LTL-EKGGIKVTG 159 (356)
Q Consensus 89 ~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~-----~g~~i~~D~vi~a~G~~p~~~--l~~~~-l~~-~~g~I~vd~ 159 (356)
+.|+++||++++++++++++.++++....+.+. +++++++|.|++|+|++||++ +++.. +.. ++|+|.||+
T Consensus 232 ~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~ 311 (478)
T 1v59_A 232 KFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDD 311 (478)
T ss_dssp HHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCCT
T ss_pred HHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeECc
Confidence 999999999999999999986213333455554 456899999999999999998 55543 665 478899999
Q ss_pred ccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccceE
Q 018416 160 RLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEV 239 (356)
Q Consensus 160 ~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~ 239 (356)
+|||+.|+|||+|||+..+ .++..|.+||+.||.||++......+..+|+ ..+++..++++|+++.++
T Consensus 312 ~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~--~~~~~~~~a~vG~~e~~a 379 (478)
T 1v59_A 312 QFNSKFPHIKVVGDVTFGP----------MLAHKAEEEGIAAVEMLKTGHGHVNYNNIPS--VMYSHPEVAWVGKTEEQL 379 (478)
T ss_dssp TSBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHHHSCCCCCTTSCCE--EECSSSEEEEEECCHHHH
T ss_pred CCccCCCCEEEeeccCCCc----------ccHHHHHHHHHHHHHHHcCCCCCCCCCCCCE--EEEcCCcEEEEECCHHHH
Confidence 9999999999999999854 3567899999999999998653345666775 456778899999887532
Q ss_pred -------EEEc-----------cCCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcCcHHHHhhcCCC
Q 018416 240 -------VHYG-----------NFSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELETQGLG 298 (356)
Q Consensus 240 -------~~~g-----------~~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~~~~~ 298 (356)
.... ..+..+|.+++. ++|+|+|++++|+.+.+ ++.++.+|++++|++||.++. .
T Consensus 380 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~----~ 455 (478)
T 1v59_A 380 KEAGIDYKIGKFPFAANSRAKTNQDTEGFVKILIDSKTERILGAHIIGPNAGEMIAEAGLALEYGASAEDVARVC----H 455 (478)
T ss_dssp HHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSC----C
T ss_pred HHcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCC----C
Confidence 1110 012234766655 48999999999988655 678899999999999998876 4
Q ss_pred cccCcCCC
Q 018416 299 FALAVSQK 306 (356)
Q Consensus 299 yap~~~~~ 306 (356)
++|++++.
T Consensus 456 ~~Pt~~e~ 463 (478)
T 1v59_A 456 AHPTLSEA 463 (478)
T ss_dssp CTTCTTHH
T ss_pred CCCCHHHH
Confidence 66888765
No 32
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=8.4e-37 Score=303.66 Aligned_cols=276 Identities=21% Similarity=0.233 Sum_probs=217.3
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|..++.++.+.+++++. .++..+ . ..+++++|||+|++|+|+|..|++.|.+||++++.+++++. +++++
T Consensus 153 ~p~~~~~~~~~~~~v~~~---~~~~~~----~-~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~ 223 (476)
T 3lad_A 153 KPVEIPPAPVDQDVIVDS---TGALDF----Q-NVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA-VDEQV 223 (476)
T ss_dssp EECCCTTSCCCSSSEEEH---HHHTSC----S-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-SCHHH
T ss_pred CCCCCCCCCCCcccEEec---hhhhcc----c-cCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcc-cCHHH
Confidence 345555555555667743 222211 1 25799999999999999999999999999999999999996 89999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCC---cEEecCeEEEecCCCCCchhh--hc-cccc-ccCcEE
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG---NRLPTDMVVVGIGIRPNTSLF--EG-QLTL-EKGGIK 156 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g---~~i~~D~vi~a~G~~p~~~l~--~~-~l~~-~~g~I~ 156 (356)
.+.+.+.|++.||++++++++++++.++++ ..+.+.++ +++++|.|++|+|++|+++++ +. ++.. ++|+|.
T Consensus 224 ~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~--~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~ 301 (476)
T 3lad_A 224 AKEAQKILTKQGLKILLGARVTGTEVKNKQ--VTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIY 301 (476)
T ss_dssp HHHHHHHHHHTTEEEEETCEEEEEEECSSC--EEEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBC
T ss_pred HHHHHHHHHhCCCEEEECCEEEEEEEcCCE--EEEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEe
Confidence 999999999999999999999999874333 34555544 679999999999999999843 33 3555 568899
Q ss_pred EecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeeccc
Q 018416 157 VTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNV 236 (356)
Q Consensus 157 vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~ 236 (356)
||+++||+.|+|||+|||+..+ .++..|..||+.||+||+|.....++..+|+. .+++..++++|+++
T Consensus 302 vd~~~~t~~~~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~--~~~~~~~a~vGlte 369 (476)
T 3lad_A 302 VDDYCATSVPGVYAIGDVVRGA----------MLAHKASEEGVVVAERIAGHKAQMNYDLIPAV--IYTHPEIAGVGKTE 369 (476)
T ss_dssp CCTTSBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHHHCCCCCCTTCCCEE--ECSSSEEEEEECCH
T ss_pred eCCCcccCCCCEEEEEccCCCc----------ccHHHHHHHHHHHHHHhcCCCcccCCCCCCEE--EECcCCEEEeeCCH
Confidence 9999999999999999999654 35778999999999999987654566677864 46788999999988
Q ss_pred ceEEE------Ec-----c-------CCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcCcHHHHhhc
Q 018416 237 GEVVH------YG-----N-------FSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELETQ 295 (356)
Q Consensus 237 ~~~~~------~g-----~-------~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~~ 295 (356)
.++.. .+ . .+..+|.|+.. ++|+|||+|++|+++.+ ++.++.||++++|++||.++.
T Consensus 370 ~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~-- 447 (476)
T 3lad_A 370 QALKAEGVAINVGVFPFAASGRAMAANDTAGFVKVIADAKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLGMMV-- 447 (476)
T ss_dssp HHHHHTTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSC--
T ss_pred HHHHhcCCCEEEEEEeccccchheecCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCc--
Confidence 54311 11 1 12235766654 58999999999988655 678899999999999998876
Q ss_pred CCCcccCcCCC
Q 018416 296 GLGFALAVSQK 306 (356)
Q Consensus 296 ~~~yap~~~~~ 306 (356)
.++|++++.
T Consensus 448 --~~hPt~~e~ 456 (476)
T 3lad_A 448 --FAHPALSEA 456 (476)
T ss_dssp --CCSSCSHHH
T ss_pred --cCCCChHHH
Confidence 466877765
No 33
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=1.4e-35 Score=287.03 Aligned_cols=257 Identities=24% Similarity=0.341 Sum_probs=212.4
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|..+++||.+.+++++.+++.++.++++.+. .+++++|||+|++|+|+|..|++.|.+||++++.+++++..+++++
T Consensus 112 ~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~--~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~ 189 (384)
T 2v3a_A 112 EPIRVPVEGDAQDALYPINDLEDYARFRQAAA--GKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAA 189 (384)
T ss_dssp EECCCCCBSTTTTCEEECSSHHHHHHHHHHHT--TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHH
T ss_pred CcCCCCCCCcCcCCEEEECCHHHHHHHHHhhc--cCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcccCHHH
Confidence 57778899987789999999999999888876 5899999999999999999999999999999999999988679999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchhhhcc-cccccCcEEEecccc
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTLEKGGIKVTGRLQ 162 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-l~~~~g~I~vd~~l~ 162 (356)
.+.+.+.+++.||++++++++++++.+++ . ..+++.+|+++++|.|++|+|++|++++++.. +..++| |.||++||
T Consensus 190 ~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~-~~v~~~~g~~i~~d~vv~a~G~~p~~~l~~~~g~~~~~g-i~vd~~~~ 266 (384)
T 2v3a_A 190 AKAVQAGLEGLGVRFHLGPVLASLKKAGE-G-LEAHLSDGEVIPCDLVVSAVGLRPRTELAFAAGLAVNRG-IVVDRSLR 266 (384)
T ss_dssp HHHHHHHHHTTTCEEEESCCEEEEEEETT-E-EEEEETTSCEEEESEEEECSCEEECCHHHHHTTCCBSSS-EEECTTCB
T ss_pred HHHHHHHHHHcCCEEEeCCEEEEEEecCC-E-EEEEECCCCEEECCEEEECcCCCcCHHHHHHCCCCCCCC-EEECCCCC
Confidence 99999999999999999999999986333 2 46788899999999999999999999877654 555555 99999999
Q ss_pred cCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccc---eE
Q 018416 163 SSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVG---EV 239 (356)
Q Consensus 163 ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~---~~ 239 (356)
|+.|+|||+|||+..... ..+++..|..||+.+|+||+|......+..+|+++. .+++++.+.|.+.. ..
T Consensus 267 t~~~~IyA~GD~~~~~~~------~~~~~~~a~~~g~~~a~~i~g~~~~~~~~~~p~~~~-~~~~~~~~~g~~~~~~~~~ 339 (384)
T 2v3a_A 267 TSHANIYALGDCAEVDGL------NLLYVMPLMACARALAQTLAGNPSQVAYGPMPVTVK-TPACPLVVSPPPRGMDGQW 339 (384)
T ss_dssp CSSTTEEECGGGEEETTB------CCCSHHHHHHHHHHHHHHHTTCCCCCCCCCCCEEEC-CTTSCEEEECCCTTCCCEE
T ss_pred CCCCCEEEeeeeeeECCC------CcchHHHHHHHHHHHHHHhcCCCccCCCCCcceEEE-ECCeeEEEecCCCCCCceE
Confidence 999999999999975432 135788899999999999998754345566787553 24567888887643 33
Q ss_pred EEEccCCCCceEEEEe-eCCeEEEEEEeCCCHHHHH
Q 018416 240 VHYGNFSGTTFGAYWV-NKGRLVGSFLEGGTKEEYE 274 (356)
Q Consensus 240 ~~~g~~~~~~~~~~~~-~~g~ilGa~~vg~~~~~~~ 274 (356)
...++. .+|.+++. ++|+|+|++++|+.+.++.
T Consensus 340 ~~~~~~--~g~~~~~~~~~~~i~G~~~~g~~a~e~~ 373 (384)
T 2v3a_A 340 LVEGSG--TDLKVLCRDTAGRVIGYALTGAAVNEKL 373 (384)
T ss_dssp EEEEET--TEEEEEEECTTSCEEEEEEEGGGGGGHH
T ss_pred EEEecC--CcEEEEEEccCCEEEEEEEECcchHHHH
Confidence 334443 35777666 5899999999998877654
No 34
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=1.7e-36 Score=301.63 Aligned_cols=276 Identities=18% Similarity=0.201 Sum_probs=215.6
Q ss_pred CCccC---CCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCC
Q 018416 4 KLEEF---GLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFT 80 (356)
Q Consensus 4 ~p~~~---~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d 80 (356)
+|..+ ++||.+ .+ .+.++...+ . ..+++++|||+|++|+|+|..|+++|.+||++++.+++++. +|
T Consensus 159 ~p~~p~~~~i~G~~--~~---~~~~~~~~~----~-~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d 227 (478)
T 3dk9_A 159 MPSTPHESQIPGAS--LG---ITSDGFFQL----E-ELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRS-FD 227 (478)
T ss_dssp EECCCCTTTSTTGG--GS---BCHHHHTTC----C-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SC
T ss_pred CCCCCCcCCCCCCc--ee---EchHHhhch----h-hcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccc-cC
Confidence 35555 788875 22 233333222 1 24799999999999999999999999999999999999986 89
Q ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCC---C----cEEecCeEEEecCCCCCch-h-hhc-cccc
Q 018416 81 PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD---G----NRLPTDMVVVGIGIRPNTS-L-FEG-QLTL 150 (356)
Q Consensus 81 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~---g----~~i~~D~vi~a~G~~p~~~-l-~~~-~l~~ 150 (356)
+++.+.+.+.|+++||++++++.+++++.++++....+.+.+ | +++++|.|++++|++|+++ + ++. ++..
T Consensus 228 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~ 307 (478)
T 3dk9_A 228 SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQT 307 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCB
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCee
Confidence 999999999999999999999999999875555234566665 2 5799999999999999998 3 333 3666
Q ss_pred -ccCcEEEecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCC--CCCCCCCCCeEEEEecCc
Q 018416 151 -EKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPD--KTDKFDYLPFFYSRVFTL 227 (356)
Q Consensus 151 -~~g~I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~--~~~~~~~~p~~~~~~~~~ 227 (356)
++|+|.||+++||+.|+|||+|||+..+ .++..|..||+.+|+||++.. ....+..+|+ ..++++
T Consensus 308 ~~~G~i~vd~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~--~~~~~p 375 (478)
T 3dk9_A 308 DDKGHIIVDEFQNTNVKGIYAVGDVCGKA----------LLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPT--VVFSHP 375 (478)
T ss_dssp CTTCCBCCCTTCBCSSTTEEECGGGGCSS----------CCHHHHHHHHHHHHHHHHSCCTTCCCCCTTCCE--EECCSS
T ss_pred CCCCCEeeCCCcccCCCCEEEEEecCCCC----------ccHhHHHHHHHHHHHHHcCCCCcccCCCCCCCe--EEECCC
Confidence 6788999999999999999999999544 357789999999999999872 2235566775 455678
Q ss_pred eEEEeecccceEEEE-------------cc-------CCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCC
Q 018416 228 SWQFYGDNVGEVVHY-------------GN-------FSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQP 284 (356)
Q Consensus 228 ~~~~~G~~~~~~~~~-------------g~-------~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~ 284 (356)
.++++|+++.++... .. ....+|.|+.. ++|+|||+|++|+.+.+ ++.++.||++++
T Consensus 376 ~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~ 455 (478)
T 3dk9_A 376 PIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGA 455 (478)
T ss_dssp CEEEEECCHHHHHHHHCGGGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTC
T ss_pred ceEEeeCCHHHHHhhCCCccEEEEEeecCcchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCC
Confidence 899999987643211 11 11234767654 68999999999988655 678899999999
Q ss_pred CcCcHHHHhhcCCCcccCcCCC
Q 018416 285 VVEDLAELETQGLGFALAVSQK 306 (356)
Q Consensus 285 ~~~dl~~l~~~~~~yap~~~~~ 306 (356)
|++||.++. ..+|.+++.
T Consensus 456 t~~~l~~~~----~~hPt~~e~ 473 (478)
T 3dk9_A 456 TKADFDNTV----AIHPTSSEE 473 (478)
T ss_dssp BHHHHHTSC----CCSSSSGGG
T ss_pred CHHHHhhcc----cCCCChHHH
Confidence 999998865 667777765
No 35
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=2.6e-36 Score=299.40 Aligned_cols=274 Identities=22% Similarity=0.269 Sum_probs=215.9
Q ss_pred CCccCC-CCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHH
Q 018416 4 KLEEFG-LSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPK 82 (356)
Q Consensus 4 ~p~~~~-ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~ 82 (356)
+|..++ +||. ++++ +.+++.++++ ..+++++|||+|++|+|+|..|+++|.+||++++.+++++. ++++
T Consensus 142 ~p~~p~gi~~~--~~v~---~~~~~~~l~~----~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~ 211 (464)
T 2eq6_A 142 EPLELKGFPFG--EDVW---DSTRALKVEE----GLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ-GDPE 211 (464)
T ss_dssp EECCBTTBCCS--SSEE---CHHHHTCGGG----CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHH
T ss_pred CCCCCCCCCCC--CcEE---cHHHHHhhhh----hcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc-cCHH
Confidence 355554 7763 2454 5556554422 24799999999999999999999999999999999999996 8999
Q ss_pred HHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeC-C--Cc--EEecCeEEEecCCCCCchh--hhc-cccc-ccC
Q 018416 83 IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR-D--GN--RLPTDMVVVGIGIRPNTSL--FEG-QLTL-EKG 153 (356)
Q Consensus 83 ~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~-~--g~--~i~~D~vi~a~G~~p~~~l--~~~-~l~~-~~g 153 (356)
+.+.+.+.|+++||++++++++++++.++ +. ..+++. + |+ ++++|.|++|+|++|++++ ++. ++.. ++|
T Consensus 212 ~~~~l~~~l~~~gV~i~~~~~v~~i~~~~-~~-~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G 289 (464)
T 2eq6_A 212 TAALLRRALEKEGIRVRTKTKAVGYEKKK-DG-LHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERG 289 (464)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEET-TE-EEEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTS
T ss_pred HHHHHHHHHHhcCCEEEcCCEEEEEEEeC-CE-EEEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCC
Confidence 99999999999999999999999998633 33 346665 6 76 8999999999999999985 333 3565 568
Q ss_pred cEEEecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEee
Q 018416 154 GIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYG 233 (356)
Q Consensus 154 ~I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G 233 (356)
+|.||++|||+.|+|||+|||+..+ .++..|..||+.+|.||++......+. +|+ ..+++..++++|
T Consensus 290 ~i~vd~~~~t~~~~Iya~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~~~~~~~-~p~--~~~~~~~~a~vG 356 (464)
T 2eq6_A 290 FIRVNARMETSVPGVYAIGDAARPP----------LLAHKAMREGLIAAENAAGKDSAFDYQ-VPS--VVYTSPEWAGVG 356 (464)
T ss_dssp CBCCCTTCBCSSTTEEECGGGTCSS----------CCHHHHHHHHHHHHHHHTTCCCCCCCC-CCE--EECSSSEEEEEE
T ss_pred CEEECCCcccCCCCEEEEeccCCCc----------ccHHHHHHHHHHHHHHhcCCCcccCCC-CCe--EEECCCCEEEEe
Confidence 8999999999999999999999754 357789999999999999865333455 775 456788999999
Q ss_pred cccceEE------EEc------------cCCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcCcHHHH
Q 018416 234 DNVGEVV------HYG------------NFSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAEL 292 (356)
Q Consensus 234 ~~~~~~~------~~g------------~~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l 292 (356)
+++.++. ..+ ..+..+|.+++. ++|+|+|++++|+.+.+ ++.++.||++++|++||.++
T Consensus 357 ~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~ 436 (464)
T 2eq6_A 357 LTEEEAKRAGYKVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALT 436 (464)
T ss_dssp CCHHHHHHTTCCEEEEEEEGGGCHHHHHTSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHS
T ss_pred CCHHHHHhcCCCEEEEEEEcCcchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcC
Confidence 8875321 110 112245777766 47999999999998765 57889999999999999874
Q ss_pred hhcCCCcccCcCCC
Q 018416 293 ETQGLGFALAVSQK 306 (356)
Q Consensus 293 ~~~~~~yap~~~~~ 306 (356)
+.++|++++.
T Consensus 437 ----~~~~Pt~~e~ 446 (464)
T 2eq6_A 437 ----VHPHPTLSES 446 (464)
T ss_dssp ----CCCSSCTTHH
T ss_pred ----cCCCCChHHH
Confidence 4778888765
No 36
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.9e-36 Score=300.12 Aligned_cols=250 Identities=20% Similarity=0.287 Sum_probs=206.2
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEE
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVA 117 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~ 117 (356)
.+++++|||+|++|+|+|..|++.|.+||++++.+++++. +|+++.+.+.+.|++.||++++++++++++.++++ ..
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~--~~ 273 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG-MDGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDG--AK 273 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS-SCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTE--EE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc-CCHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCE--EE
Confidence 5899999999999999999999999999999999999997 89999999999999999999999999999874333 23
Q ss_pred EEeCC---C--cEEecCeEEEecCCCCCchh--hh-ccccc-ccCcEEEecccccCCCCEEEEccccccCccccCccccc
Q 018416 118 VNLRD---G--NRLPTDMVVVGIGIRPNTSL--FE-GQLTL-EKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRL 188 (356)
Q Consensus 118 v~~~~---g--~~i~~D~vi~a~G~~p~~~l--~~-~~l~~-~~g~I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~ 188 (356)
+.+.+ | +++++|.||+|+|++|++++ ++ .++.. ++|+|.||+++||+.|+|||+|||+..+
T Consensus 274 v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~---------- 343 (491)
T 3urh_A 274 VTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQTSIAGVYAIGDVVRGP---------- 343 (491)
T ss_dssp EEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTTCBCSSTTEEECGGGSSSC----------
T ss_pred EEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCCCCCCCCCEEEEEecCCCc----------
Confidence 44442 4 57999999999999999985 33 34665 5788999999999999999999999654
Q ss_pred ccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccceEEEE------c-----c-------CCCCce
Q 018416 189 EHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEVVHY------G-----N-------FSGTTF 250 (356)
Q Consensus 189 ~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~------g-----~-------~~~~~~ 250 (356)
.++..|..||+.||++|+|......+..+|+.. +++..++++|+++.++... + . .+..+|
T Consensus 344 ~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~--~~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 421 (491)
T 3urh_A 344 MLAHKAEDEGVAVAEIIAGQAGHVNYDVIPGVV--YTQPEVASVGKTEEELKAAGVAYKIGKFPFTANGRARAMLQTDGF 421 (491)
T ss_dssp CCHHHHHHHHHHHHHHHTTSCCCCCTTCCCEEE--CSSSCEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCE
T ss_pred cchhHHHHHHHHHHHHHcCCCcccCCCCCCEEE--EccCCeEEEeCCHHHHHhCCCCEEEEEEecCcchhhhcCCCCcEE
Confidence 467889999999999999876545566788644 6788999999987643111 1 0 122357
Q ss_pred EEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcCcHHHHhhcCCCcccCcCCC
Q 018416 251 GAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELETQGLGFALAVSQK 306 (356)
Q Consensus 251 ~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~~~~~yap~~~~~ 306 (356)
.|+.. ++|+|||+|++|+.+.+ ++.++.||++++|++||.++. .++|++++.
T Consensus 422 ~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~----~~hPt~~e~ 476 (491)
T 3urh_A 422 VKILADKETDRVLGGHIIGFGAGEMIHEIAVLMEFGGSSEDLGRTC----HAHPTMSEA 476 (491)
T ss_dssp EEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSC----CCSSCTTHH
T ss_pred EEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCc----cCCCChHHH
Confidence 77655 58999999999998655 678899999999999999877 667888775
No 37
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=1.1e-36 Score=302.38 Aligned_cols=276 Identities=17% Similarity=0.205 Sum_probs=218.0
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|+.+++||.+ + +.+.+++..+++.+.. .+++++|||+|++|+|+|..|+++|.+||++++.+++++..+|+++
T Consensus 143 ~p~~p~i~G~~--~---~~t~~~~~~~~~~l~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~ 216 (466)
T 3l8k_A 143 ETAKLRLPGVE--Y---CLTSDDIFGYKTSFRK-LPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLEDQDI 216 (466)
T ss_dssp EECCCCCTTGG--G---SBCHHHHHSTTCSCCS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCCHHH
T ss_pred CccCCCCCCcc--c---eEeHHHHHHHHHHHhh-CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCCCCHHH
Confidence 57788899986 3 4456666543333332 5799999999999999999999999999999999999998349999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeC--CCc--EEecCeEEEecCCCCCchh-h-hccccc-ccCcEE
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR--DGN--RLPTDMVVVGIGIRPNTSL-F-EGQLTL-EKGGIK 156 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~--~g~--~i~~D~vi~a~G~~p~~~l-~-~~~l~~-~~g~I~ 156 (356)
.+.+++.|+ |++++++++++++.++++.+ .+.+. +|+ ++++|.|++++|++|++.+ + ..++.. ++| |.
T Consensus 217 ~~~l~~~l~---v~i~~~~~v~~i~~~~~~~v-~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~l~~~gl~~~~~G-i~ 291 (466)
T 3l8k_A 217 VNTLLSILK---LNIKFNSPVTEVKKIKDDEY-EVIYSTKDGSKKSIFTNSVVLAAGRRPVIPEGAREIGLSISKTG-IV 291 (466)
T ss_dssp HHHHHHHHC---CCEECSCCEEEEEEEETTEE-EEEECCTTSCCEEEEESCEEECCCEEECCCTTTGGGTCCBCSSS-BC
T ss_pred HHHHHhcCE---EEEEECCEEEEEEEcCCCcE-EEEEEecCCceEEEEcCEEEECcCCCcccccchhhcCceeCCCC-Ee
Confidence 999998887 99999999999987431443 46676 666 7999999999999999984 3 334666 466 99
Q ss_pred EecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCC--CC-CCCCCCCCeEEEEecCceEEEee
Q 018416 157 VTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEP--DK-TDKFDYLPFFYSRVFTLSWQFYG 233 (356)
Q Consensus 157 vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~--~~-~~~~~~~p~~~~~~~~~~~~~~G 233 (356)
||+++||+.|+|||+|||+..+ +++..|..||+.||.||++. .. ...+..+|+ ..+++..++++|
T Consensus 292 vd~~~~t~~~~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~--~~~~~~~~a~vG 359 (466)
T 3l8k_A 292 VDETMKTNIPNVFATGDANGLA----------PYYHAAVRMSIAAANNIMANGMPVDYVDVKSIPV--TIYTIPSLSYVG 359 (466)
T ss_dssp CCTTCBCSSTTEEECGGGTCSC----------CSHHHHHHHHHHHHHHHHTTTSCCCCCCSTTSCE--EECSSSCEEEEE
T ss_pred ECCCccCCCCCEEEEEecCCCC----------ccHhHHHHHHHHHHHHHhCCCCCccccCCCCCcE--EEECCCCeEEec
Confidence 9999999999999999999863 46788999999999999986 32 234555664 456688899999
Q ss_pred cccceEE---------EE--cc-------CCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcCcHHHH
Q 018416 234 DNVGEVV---------HY--GN-------FSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAEL 292 (356)
Q Consensus 234 ~~~~~~~---------~~--g~-------~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l 292 (356)
+++.++. .. .+ .+..+|.|+.. ++|+|||+|++|+.+.+ ++.++.||++++|++||.++
T Consensus 360 ~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~ 439 (466)
T 3l8k_A 360 ILPSKARKMGIEIVEAEYNMEEDVSAQIYGQKEGVLKLIFERGSMRLIGAWMIGVHSQYLINELGLAVAYGLNAKQLASF 439 (466)
T ss_dssp CCHHHHHHHTCCEEEEEEEGGGSHHHHHHTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHC
T ss_pred CCHHHHHhCCCCEEEEEEEcccChhheecCCCeEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCcCCHHHHhcc
Confidence 9876431 11 01 12245777665 47999999999998655 57889999999999999886
Q ss_pred hhcCCCcccCcCCC
Q 018416 293 ETQGLGFALAVSQK 306 (356)
Q Consensus 293 ~~~~~~yap~~~~~ 306 (356)
. .|+|+++++
T Consensus 440 ~----~~~Pt~~e~ 449 (466)
T 3l8k_A 440 A----EQHPSTNEI 449 (466)
T ss_dssp C----CCTTSTTHH
T ss_pred c----cCCCChHHH
Confidence 5 789999876
No 38
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=3.1e-36 Score=298.86 Aligned_cols=274 Identities=19% Similarity=0.245 Sum_probs=217.7
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|..+++||.+ .+ .+.+++..+ . ..+++++|||+|++|+|+|..|+++|.+||++++.+++++. +|+++
T Consensus 141 ~p~~p~i~G~~--~~---~~~~~~~~~----~-~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~ 209 (463)
T 2r9z_A 141 RPIVPRLPGAE--LG---ITSDGFFAL----Q-QQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ-FDPLL 209 (463)
T ss_dssp EECCCSCTTGG--GS---BCHHHHHHC----S-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHH
T ss_pred CCCCCCCCCcc--ce---ecHHHHhhh----h-ccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc-cCHHH
Confidence 46677888874 33 345554433 2 25789999999999999999999999999999999999987 89999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCc-EEecCeEEEecCCCCCch-h-hhc-cccc-ccCcEEEe
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGN-RLPTDMVVVGIGIRPNTS-L-FEG-QLTL-EKGGIKVT 158 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~-~i~~D~vi~a~G~~p~~~-l-~~~-~l~~-~~g~I~vd 158 (356)
.+.+.+.|+++||++++++++++++.++++ ..+++++|+ ++++|.|++|+|++|+++ + ++. ++.. ++|+|.||
T Consensus 210 ~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd 287 (463)
T 2r9z_A 210 SATLAENMHAQGIETHLEFAVAALERDAQG--TTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTD 287 (463)
T ss_dssp HHHHHHHHHHTTCEEESSCCEEEEEEETTE--EEEEETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCC
T ss_pred HHHHHHHHHHCCCEEEeCCEEEEEEEeCCe--EEEEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeEC
Confidence 999999999999999999999999864333 467888998 899999999999999997 3 333 3655 57889999
Q ss_pred cccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCC--CCCCCCCeEEEEecCceEEEeeccc
Q 018416 159 GRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKT--DKFDYLPFFYSRVFTLSWQFYGDNV 236 (356)
Q Consensus 159 ~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~--~~~~~~p~~~~~~~~~~~~~~G~~~ 236 (356)
+++||+.|+|||+|||+..+ .++..|.+||+.+|.||++.... ..+..+|+. .+++..++++|+++
T Consensus 288 ~~~~t~~~~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~--~~~~~~~a~vGl~e 355 (463)
T 2r9z_A 288 AYQNTNVPGVYALGDITGRD----------QLTPVAIAAGRRLAERLFDGQSERKLDYDNIPTV--VFAHPPLSKVGLSE 355 (463)
T ss_dssp TTSBCSSTTEEECGGGGTSC----------CCHHHHHHHHHHHHHHHHSCCTTCCCCCSSCCEE--ECCSSCEEEEECCH
T ss_pred CCCccCCCCEEEEeecCCCc----------ccHHHHHHHHHHHHHHHcCCCCcccCCCCCCCEE--EeCCCCeEEEcCCH
Confidence 99999999999999998643 45778999999999999986422 345567754 45677899999875
Q ss_pred ceEE-------EEc------------cCCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcCcHHHHhh
Q 018416 237 GEVV-------HYG------------NFSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELET 294 (356)
Q Consensus 237 ~~~~-------~~g------------~~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~ 294 (356)
.++. ... .....+|.++.. ++|+|+|+|++|+.+.+ ++.++.||++++|++||.++.
T Consensus 356 ~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~- 434 (463)
T 2r9z_A 356 PEARERLGDVLTVYETSFTPMRYALNEHGPKTAMKLVCAGPEQRVVGVHVIGDGADEMLQGFAVAVKMGATKADFDNTV- 434 (463)
T ss_dssp HHHHHHHCSCEEEEEEEECCGGGTTSSSCCCEEEEEEEETTTTEEEEEEEESTTGGGTSHHHHHHHHTTCBHHHHHTSC-
T ss_pred HHHHhcCCCCEEEEEEEcccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCc-
Confidence 4321 110 111234777665 48999999999987655 688899999999999998765
Q ss_pred cCCCcccCcCCC
Q 018416 295 QGLGFALAVSQK 306 (356)
Q Consensus 295 ~~~~yap~~~~~ 306 (356)
.++|++++.
T Consensus 435 ---~~hPt~~e~ 443 (463)
T 2r9z_A 435 ---AIHPGSAEE 443 (463)
T ss_dssp ---CCSSSSGGG
T ss_pred ---cCCCCHHHH
Confidence 678888887
No 39
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=7.8e-36 Score=287.54 Aligned_cols=240 Identities=21% Similarity=0.373 Sum_probs=199.0
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|+.+++|| .++++++++.+|+.++++.+. ++++++|||+|++|+|+|..|+++|.+||++++.+++++ +|+++
T Consensus 112 ~p~~p~i~G--~~~v~~~~~~~~~~~l~~~~~--~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~~~~~ 185 (367)
T 1xhc_A 112 RAREPQIKG--KEYLLTLRTIFDADRIKESIE--NSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG--LDEEL 185 (367)
T ss_dssp EECCCCSBT--GGGEECCCSHHHHHHHHHHHH--HHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT--CCHHH
T ss_pred CCCCCCCCC--cCCEEEEcCHHHHHHHHHHhh--cCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc--CCHHH
Confidence 577888998 468999999999999988775 358999999999999999999999999999999999988 89999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchhhhcc-cccccCcEEEecccc
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTLEKGGIKVTGRLQ 162 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-l~~~~g~I~vd~~l~ 162 (356)
.+.+.+.|+++||++++++++++++. . .+++++|+ +++|.|++++|++||+++++.. +..+ ++|.||++||
T Consensus 186 ~~~l~~~l~~~gV~i~~~~~v~~i~~---~---~v~~~~g~-i~~D~vi~a~G~~p~~~ll~~~gl~~~-~gi~Vd~~~~ 257 (367)
T 1xhc_A 186 SNMIKDMLEETGVKFFLNSELLEANE---E---GVLTNSGF-IEGKVKICAIGIVPNVDLARRSGIHTG-RGILIDDNFR 257 (367)
T ss_dssp HHHHHHHHHHTTEEEECSCCEEEECS---S---EEEETTEE-EECSCEEEECCEEECCHHHHHTTCCBS-SSEECCTTSB
T ss_pred HHHHHHHHHHCCCEEEcCCEEEEEEe---e---EEEECCCE-EEcCEEEECcCCCcCHHHHHhCCCCCC-CCEEECCCcc
Confidence 99999999999999999999999962 2 46778887 9999999999999999877654 5555 4599999999
Q ss_pred cCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCC-CCeEEEEecCceEEEeecccceEEE
Q 018416 163 SSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDY-LPFFYSRVFTLSWQFYGDNVGEVVH 241 (356)
Q Consensus 163 ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~-~p~~~~~~~~~~~~~~G~~~~~~~~ 241 (356)
|+.|+|||+|||+..... ...++..|..||+.||.||++.. ..+.. +|+.++.++++.++++|.++.+...
T Consensus 258 t~~~~IyA~GD~a~~~~~------~~~~~~~A~~qg~~aa~~i~g~~--~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~ 329 (367)
T 1xhc_A 258 TSAKDVYAIGDCAEYSGI------IAGTAKAAMEQARVLADILKGEP--RRYNFKFRSTVFKFGKLQIAIIGNTKGEGKW 329 (367)
T ss_dssp CSSTTEEECGGGEEBTTB------CCCSHHHHHHHHHHHHHHHTTCC--CCCCSSCCEEEEEETTEEEEEEECCSSCEEE
T ss_pred cCCCCEEEeEeeeecCCC------CccHHHHHHHHHHHHHHHhcCCC--ccCCCCCCceEEEECCceEEEECCCCCCCcc
Confidence 999999999999976432 12478899999999999999865 34444 4555678999999999998876543
Q ss_pred EccCCCCceEEEEeeCCeEEEEEEeCCCH
Q 018416 242 YGNFSGTTFGAYWVNKGRLVGSFLEGGTK 270 (356)
Q Consensus 242 ~g~~~~~~~~~~~~~~g~ilGa~~vg~~~ 270 (356)
. .+|.+++.++|+|+|++++|+..
T Consensus 330 ~-----~~~~k~~~~~~~ilG~~~~g~~~ 353 (367)
T 1xhc_A 330 I-----EDNTKVFYENGKIIGAVVFNDIR 353 (367)
T ss_dssp E-----ETTEEEEC-----CEEEEESCHH
T ss_pred c-----ceEEEEEEECCEEEEEEEECChH
Confidence 2 34888888889999999999644
No 40
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.6e-36 Score=298.30 Aligned_cols=274 Identities=19% Similarity=0.251 Sum_probs=218.0
Q ss_pred CCc-cCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHH
Q 018416 4 KLE-EFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPK 82 (356)
Q Consensus 4 ~p~-~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~ 82 (356)
+|. .+++||.+ .+ .+.+++..+ . ..+++++|||+|++|+|+|..|++.|.+||++++.+++++. +|++
T Consensus 144 ~p~~~p~i~G~~--~~---~~~~~~~~~----~-~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~-~~~~ 212 (463)
T 4dna_A 144 HPSPHDALPGHE--LC---ITSNEAFDL----P-ALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSR-FDQD 212 (463)
T ss_dssp EECCCTTSTTGG--GC---BCHHHHTTC----S-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHH
T ss_pred CcccCCCCCCcc--cc---ccHHHHhhh----h-cCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHH
Confidence 355 67788875 22 344444332 1 25899999999999999999999999999999999999986 8999
Q ss_pred HHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEE-eCCCcEEecCeEEEecCCCCCchh--hh-ccccc-ccCcEEE
Q 018416 83 IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVN-LRDGNRLPTDMVVVGIGIRPNTSL--FE-GQLTL-EKGGIKV 157 (356)
Q Consensus 83 ~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~-~~~g~~i~~D~vi~a~G~~p~~~l--~~-~~l~~-~~g~I~v 157 (356)
+.+.+.+.|+++||++++++.+++++.++++. ..++ +.+|+ +++|.|++|+|++|++.+ ++ .++.. ++|+|.|
T Consensus 213 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~v 290 (463)
T 4dna_A 213 MRRGLHAAMEEKGIRILCEDIIQSVSADADGR-RVATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIV 290 (463)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECTTSC-EEEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCC
T ss_pred HHHHHHHHHHHCCCEEECCCEEEEEEEcCCCE-EEEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeE
Confidence 99999999999999999999999998744443 3577 88887 999999999999999986 33 34666 5788999
Q ss_pred ecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCC-CCCCCCCeEEEEecCceEEEeeccc
Q 018416 158 TGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKT-DKFDYLPFFYSRVFTLSWQFYGDNV 236 (356)
Q Consensus 158 d~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~-~~~~~~p~~~~~~~~~~~~~~G~~~ 236 (356)
|+++||+.|+|||+|||+..+ +++..|..||+.+|+||++.... ..+..+|+.+ +.++.++++|+++
T Consensus 291 d~~~~t~~~~iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~--~~~p~~a~vG~te 358 (463)
T 4dna_A 291 DAFSRTSTPGIYALGDVTDRV----------QLTPVAIHEAMCFIETEYKNNPTSPDHDLIATAV--FSQPEIGTVGITE 358 (463)
T ss_dssp CTTCBCSSTTEEECSGGGSSC----------CCHHHHHHHHHHHHHHHHSSCCCCCCCSCCCEEE--CSSSCEEEEECCH
T ss_pred CcCCCCCCCCEEEEEecCCCC----------CChHHHHHHHHHHHHHHcCCCCcccCCCCCCEEE--ECCCCeEEecCCH
Confidence 999999999999999999743 46778999999999999986532 3556677544 5668899999987
Q ss_pred ceEEE------Ec-----c-------CCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcCcHHHHhhc
Q 018416 237 GEVVH------YG-----N-------FSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELETQ 295 (356)
Q Consensus 237 ~~~~~------~g-----~-------~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~~ 295 (356)
.++.. .+ . .+..+|.|+.. ++|+|||+|++|+++.+ ++.++.||++++|++||.++.
T Consensus 359 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~-- 436 (463)
T 4dna_A 359 EEAARKFQEIEVYRAEFRPMKATLSGRKEKTIMKLVVNAADRKVVGAHILGHDAGEMAQLLGISLRAGCTKDDFDRTM-- 436 (463)
T ss_dssp HHHHHHSSEEEEEEEEECCTTHHHHCCCCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSC--
T ss_pred HHHHHcCCCeEEEEEeccccchhhcCCCceEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcc--
Confidence 64311 11 1 11234766655 58999999999988655 678899999999999998865
Q ss_pred CCCcccCcCCC
Q 018416 296 GLGFALAVSQK 306 (356)
Q Consensus 296 ~~~yap~~~~~ 306 (356)
.++|++++.
T Consensus 437 --~~hPt~~e~ 445 (463)
T 4dna_A 437 --AVHPTAAEE 445 (463)
T ss_dssp --CCTTCSGGG
T ss_pred --cCCCCHHHH
Confidence 667777776
No 41
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=3.5e-35 Score=291.39 Aligned_cols=274 Identities=19% Similarity=0.215 Sum_probs=215.4
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|+.+++||.+..+++ +.+++.++ . ..+++++|||+|++|+|+|..|+++|.+||++++.+++++ +|+++
T Consensus 149 ~p~~p~i~G~~~~~~~---~~~~~~~~----~-~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~~~~~ 218 (467)
T 1zk7_A 149 SPAVPPIPGLKESPYW---TSTEALAS----D-TIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR--EDPAI 218 (467)
T ss_dssp EECCCCCTTTTTSCCB---CHHHHHHC----S-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT--SCHHH
T ss_pred CCCCCCCCCCCcCcee---cHHHHhcc----c-ccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC--CCHHH
Confidence 5777889998755554 44454432 2 2579999999999999999999999999999999999998 79999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchh--hh-ccccc-ccCcEEEec
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSL--FE-GQLTL-EKGGIKVTG 159 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l--~~-~~l~~-~~g~I~vd~ 159 (356)
.+.+.+.|+++||+++++++|++++.+ ++ ...+.++ +.++++|.||+|+|++|++++ ++ .++.. .+|+|.||+
T Consensus 219 ~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~-~~~v~~~-~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~ 295 (467)
T 1zk7_A 219 GEAVTAAFRAEGIEVLEHTQASQVAHM-DG-EFVLTTT-HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQ 295 (467)
T ss_dssp HHHHHHHHHHTTCEEETTCCEEEEEEE-TT-EEEEEET-TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCT
T ss_pred HHHHHHHHHhCCCEEEcCCEEEEEEEe-CC-EEEEEEC-CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECC
Confidence 999999999999999999999999863 33 3346665 568999999999999999874 23 33555 467899999
Q ss_pred ccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccceE
Q 018416 160 RLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEV 239 (356)
Q Consensus 160 ~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~ 239 (356)
++||+.|+|||+|||+..+. .+..|..||+.+|.||++......+..+| +..+++..++++|+++.++
T Consensus 296 ~~~t~~~~iya~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~p--~~~~~~~~~a~vG~~~~~a 363 (467)
T 1zk7_A 296 GMRTSNPNIYAAGDCTDQPQ----------FVYVAAAAGTRAAINMTGGDAALDLTAMP--AVVFTDPQVATVGYSEAEA 363 (467)
T ss_dssp TCBCSSTTEEECSTTBSSCC----------CHHHHHHHHHHHHHHHTTCCCCCCCTTCE--EEECSSSEEEEEECCHHHH
T ss_pred CcccCCCCEEEEeccCCCcc----------cHHHHHHHHHHHHHHHcCCCcccCCCCCC--EEEecCCceEEEecCHHHH
Confidence 99999999999999998653 46789999999999999864323444555 4556788999999876532
Q ss_pred -------EE--Ec---------cCCCCceEEEEee--CCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcCcHHHHhhcCCC
Q 018416 240 -------VH--YG---------NFSGTTFGAYWVN--KGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELETQGLG 298 (356)
Q Consensus 240 -------~~--~g---------~~~~~~~~~~~~~--~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~~~~~ 298 (356)
.. .. ..+..+|.+++.+ +|+|+|++++|+.+.+ ++.++.||++++|++||.++. .
T Consensus 364 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~----~ 439 (467)
T 1zk7_A 364 HHDGIETDSRTLTLDNVPRALANFDTRGFIKLVIEEGSHRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQL----F 439 (467)
T ss_dssp HHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSC----C
T ss_pred HhcCCCeEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCc----c
Confidence 11 10 1123457777664 8999999999988655 577899999999999998876 3
Q ss_pred cccCcCCC
Q 018416 299 FALAVSQK 306 (356)
Q Consensus 299 yap~~~~~ 306 (356)
.+|.+++.
T Consensus 440 ~~pt~~e~ 447 (467)
T 1zk7_A 440 PYLTMVEG 447 (467)
T ss_dssp CTTSTTHH
T ss_pred CCCCHHHH
Confidence 45666554
No 42
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=1.3e-35 Score=295.75 Aligned_cols=276 Identities=18% Similarity=0.220 Sum_probs=213.8
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|+.+++||.+.. ++ +.+++..+ . ..+++++|||+|++|+|+|..|+++|.+||++++ +.+++. +|+++
T Consensus 161 ~p~~p~i~G~~~~-~~---~~~~~~~~----~-~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~-~~~l~~-~d~~~ 229 (483)
T 3dgh_A 161 RPRYPDIPGAVEY-GI---TSDDLFSL----D-REPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVR-SIVLRG-FDQQM 229 (483)
T ss_dssp EECCCSSTTHHHH-CB---CHHHHTTC----S-SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEES-SCSSTT-SCHHH
T ss_pred CcCCCCCCCcccc-cC---cHHHHhhh----h-hcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeC-CCCCcc-cCHHH
Confidence 4677788887522 22 33443322 1 2578999999999999999999999999999998 467776 89999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCc-----EEecCeEEEecCCCCCchhh--hc-ccccccCcE
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGN-----RLPTDMVVVGIGIRPNTSLF--EG-QLTLEKGGI 155 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~-----~i~~D~vi~a~G~~p~~~l~--~~-~l~~~~g~I 155 (356)
.+.+.+.|+++||++++++.+++++..+++.+ .+++.+++ ++++|.|++++|++|+++++ +. ++..++|+|
T Consensus 230 ~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~G~i 308 (483)
T 3dgh_A 230 AELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDKI 308 (483)
T ss_dssp HHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBTTBB
T ss_pred HHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccCCEE
Confidence 99999999999999999999999987545543 46665543 79999999999999999876 33 366645999
Q ss_pred EEecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCC-CCCCCCCeEEEEecCceEEEeec
Q 018416 156 KVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKT-DKFDYLPFFYSRVFTLSWQFYGD 234 (356)
Q Consensus 156 ~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~-~~~~~~p~~~~~~~~~~~~~~G~ 234 (356)
.||+++||+.|+|||+|||+.... .++..|..||+.||+||+|.... ..+..+|++ .+.+..++++|+
T Consensus 309 ~vd~~~~t~~~~IyA~GD~~~~~~---------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~--~~~~p~~a~vGl 377 (483)
T 3dgh_A 309 PVDSQEATNVANIYAVGDIIYGKP---------ELTPVAVLAGRLLARRLYGGSTQRMDYKDVATT--VFTPLEYACVGL 377 (483)
T ss_dssp CCCTTCBCSSTTEEECSTTBTTSC---------CCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEE--ECSSSEEEEEEC
T ss_pred EECcCCccCCCCEEEEEcccCCCC---------ccHHHHHHHHHHHHHHHcCCCCCcCCCCCCCEE--EECCCccEEEeC
Confidence 999999999999999999985321 45778999999999999987532 355667754 456778999999
Q ss_pred ccceEEE----------E---cc-----C---CCCceEEEEe--e-CCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcCcH
Q 018416 235 NVGEVVH----------Y---GN-----F---SGTTFGAYWV--N-KGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDL 289 (356)
Q Consensus 235 ~~~~~~~----------~---g~-----~---~~~~~~~~~~--~-~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl 289 (356)
++.++.. . .. . ...+|.|+.. + +|+|||+|++|+++.+ ++.++.||++++|++||
T Consensus 378 te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l 457 (483)
T 3dgh_A 378 SEEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTL 457 (483)
T ss_dssp CHHHHHHHHCGGGEEEEEEECCCGGGTTTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHH
T ss_pred CHHHHHhhCCCCCEEEEEEeecchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHH
Confidence 8754321 0 00 0 1234777655 3 6999999999998665 57889999999999999
Q ss_pred HHHhhcCCCcccCcCCC
Q 018416 290 AELETQGLGFALAVSQK 306 (356)
Q Consensus 290 ~~l~~~~~~yap~~~~~ 306 (356)
.++. .++|++++.
T Consensus 458 ~~~~----~~hPt~~e~ 470 (483)
T 3dgh_A 458 INTV----GIHPTTAEE 470 (483)
T ss_dssp HTSC----CCSSCSGGG
T ss_pred hhcc----cCCCChHHH
Confidence 8865 677888776
No 43
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=9.1e-36 Score=297.66 Aligned_cols=275 Identities=15% Similarity=0.103 Sum_probs=212.8
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|..++++|.+.+++++ .+++..+ . ..+++++|||+|++|+|+|..|++.|.+||++++.+++++. +|+++
T Consensus 147 ~p~~p~~~~~~~~~v~t---~~~~~~~----~-~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~ 217 (492)
T 3ic9_A 147 RPNYPEFLAAAGSRLLT---NDNLFEL----N-DLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL-QDEEM 217 (492)
T ss_dssp ECCCCHHHHTTGGGEEC---HHHHTTC----S-SCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC-CCHHH
T ss_pred CCcCCCCCCccCCcEEc---HHHHhhh----h-hcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-CCHHH
Confidence 45556655554455653 3333221 1 25899999999999999999999999999999999999986 89999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeC--CC--cEEecCeEEEecCCCCCchh--hhc-cccc-ccCcE
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR--DG--NRLPTDMVVVGIGIRPNTSL--FEG-QLTL-EKGGI 155 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~--~g--~~i~~D~vi~a~G~~p~~~l--~~~-~l~~-~~g~I 155 (356)
.+.+.+.|++. |++++++++++++.++ +.+ .+.+. +| +++++|.|++|+|++|++++ ++. ++.. ++|+|
T Consensus 218 ~~~l~~~l~~~-V~i~~~~~v~~i~~~~-~~v-~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i 294 (492)
T 3ic9_A 218 KRYAEKTFNEE-FYFDAKARVISTIEKE-DAV-EVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSP 294 (492)
T ss_dssp HHHHHHHHHTT-SEEETTCEEEEEEECS-SSE-EEEEECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCB
T ss_pred HHHHHHHHhhC-cEEEECCEEEEEEEcC-CEE-EEEEEeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCE
Confidence 99999999998 9999999999998743 333 35553 67 67999999999999999986 433 3665 57889
Q ss_pred EEe-cccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCC--CCCCCCeEEEEecCceEEEe
Q 018416 156 KVT-GRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTD--KFDYLPFFYSRVFTLSWQFY 232 (356)
Q Consensus 156 ~vd-~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~--~~~~~p~~~~~~~~~~~~~~ 232 (356)
.|| +++||+.|+|||+|||+..+ +++..|..||+.||.||++..... .+..+| +..++++.++++
T Consensus 295 ~vd~~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p--~~~~~~p~~a~v 362 (492)
T 3ic9_A 295 LFDELTLQTSVDHIFVAGDANNTL----------TLLHEAADDGKVAGTNAGAYPVIAQGQRRAPL--SVVFTEPQVASV 362 (492)
T ss_dssp CCCTTTCBCSSTTEEECGGGGTSS----------CSHHHHHHHHHHHHHHHHHTTSCCEECCCCCE--EEECSSSEEEEE
T ss_pred eECcccccCCCCCEEEEEecCCCC----------ccHHHHHHHHHHHHHHHcCCCCCcccCCCCCc--EEEECCCCeEEe
Confidence 999 99999999999999999764 457789999999999999743212 333344 455668899999
Q ss_pred ecccceEEEE-----------c-----c-------CCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCc
Q 018416 233 GDNVGEVVHY-----------G-----N-------FSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVV 286 (356)
Q Consensus 233 G~~~~~~~~~-----------g-----~-------~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~ 286 (356)
|+++.++... + . ....+|.|+.. ++|+|||+|++|+++.+ ++.++.||++++|+
T Consensus 363 Glte~~a~~~~g~~~g~~~~~~~~~~~~~~~a~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~ 442 (492)
T 3ic9_A 363 GLSLRQIEDLYADQDAANYVVGQVSFEGQGRSRVMGKNKGLLNVYADRTSGEFLGAEMFGPAAEHIGHLLAWARQQQMTV 442 (492)
T ss_dssp ESCHHHHHHHCSCSSSCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBH
T ss_pred cCCHHHHHhccCccCCccEEEEEEEeccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCH
Confidence 9987543221 1 0 11235777655 58999999999998766 57789999999999
Q ss_pred CcHHHHhhcCCCcccCcCCC
Q 018416 287 EDLAELETQGLGFALAVSQK 306 (356)
Q Consensus 287 ~dl~~l~~~~~~yap~~~~~ 306 (356)
+||.++. ..+|.+++.
T Consensus 443 ~~l~~~~----~~hPt~~e~ 458 (492)
T 3ic9_A 443 QAMLTMP----FYHPVIEEG 458 (492)
T ss_dssp HHHTTSC----CCTTCTHHH
T ss_pred HHHhhCC----CCCCChHHH
Confidence 9998766 466776665
No 44
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=2.3e-35 Score=291.74 Aligned_cols=276 Identities=21% Similarity=0.228 Sum_probs=218.2
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|+.+++||.+.++++ +..++..+ . ..+++++|||+|++|+|+|..|++.|.+||++++.+++++. +++++
T Consensus 140 ~p~~~~~~g~~~~~v~---~~~~~~~~----~-~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~-~~~~~ 210 (455)
T 2yqu_A 140 APLIPPWAQVDYERVV---TSTEALSF----P-EVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT-MDLEV 210 (455)
T ss_dssp EECCCTTBCCCSSSEE---CHHHHTCC----S-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHH
T ss_pred CCCCCCCCCCCcCcEe---chHHhhcc----c-cCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc-cCHHH
Confidence 4677788887655665 33444322 1 14799999999999999999999999999999999999986 89999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchh--hhc-cccc-ccCcEEEec
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSL--FEG-QLTL-EKGGIKVTG 159 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l--~~~-~l~~-~~g~I~vd~ 159 (356)
.+.+.+.++++||++++++++++++.+++ . ..+++++|+++++|.||+|+|++|++.+ ++. ++.. .+|+|.||+
T Consensus 211 ~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~-~-v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~ 288 (455)
T 2yqu_A 211 SRAAERVFKKQGLTIRTGVRVTAVVPEAK-G-ARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDE 288 (455)
T ss_dssp HHHHHHHHHHHTCEEECSCCEEEEEEETT-E-EEEEETTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCT
T ss_pred HHHHHHHHHHCCCEEEECCEEEEEEEeCC-E-EEEEECCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECC
Confidence 99999999999999999999999986333 2 4567778889999999999999999986 343 3555 467899999
Q ss_pred ccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccceE
Q 018416 160 RLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEV 239 (356)
Q Consensus 160 ~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~ 239 (356)
++||+.|+|||+|||+..+ .++..|..||+.+|.||++......+..+| +..+++..++.+|.++.++
T Consensus 289 ~~~t~~~~iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p--~~~~~~~~~a~~G~~~~~a 356 (455)
T 2yqu_A 289 HLRTRVPHIYAIGDVVRGP----------MLAHKASEEGIAAVEHMVRGFGHVDYQAIP--SVVYTHPEIAAVGYTEEEL 356 (455)
T ss_dssp TSBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHHHSCCCCCGGGCC--EEECSSSEEEEEECCHHHH
T ss_pred CcccCCCCEEEEecCCCCc----------cCHHHHHHhHHHHHHHHcCCCccCCCCCCC--EEEEcCCceEEEECCHHHH
Confidence 9999999999999999754 357789999999999999864323344456 4567888999999876432
Q ss_pred ------EEEc------------cCCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcCcHHHHhhcCCC
Q 018416 240 ------VHYG------------NFSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELETQGLG 298 (356)
Q Consensus 240 ------~~~g------------~~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~~~~~ 298 (356)
+..+ ..+..+|.++.. ++|+|+|++++|+.+.+ ++.++.+|++++|++|+.++. .
T Consensus 357 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~~~~~~----~ 432 (455)
T 2yqu_A 357 KAQGIPYKVGKFPYSASGRARAMGETEGFIKVLAHAKTDRILGVHGIGARVGDVLAEAALALFFKASAEDLGRAP----H 432 (455)
T ss_dssp HHHTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSC----C
T ss_pred HHcCCCEEEEEEEcccchHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcc----c
Confidence 1111 112235777766 48999999999987655 577899999999999998765 5
Q ss_pred cccCcCCC
Q 018416 299 FALAVSQK 306 (356)
Q Consensus 299 yap~~~~~ 306 (356)
++|++++.
T Consensus 433 ~~Pt~~e~ 440 (455)
T 2yqu_A 433 AHPSLSEI 440 (455)
T ss_dssp CSSCTHHH
T ss_pred CCCCHHHH
Confidence 66888765
No 45
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=4.2e-35 Score=292.90 Aligned_cols=280 Identities=23% Similarity=0.353 Sum_probs=222.6
Q ss_pred CCccCCCCCCC----CCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHH----CCCcEEEEeeCCccC
Q 018416 4 KLEEFGLSGSD----AENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVI----NKINVTMVFPEAHCM 75 (356)
Q Consensus 4 ~p~~~~ipG~~----~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~----~G~~Vtlv~~~~~~l 75 (356)
+|+.++++|.. .++++++++++|+.++++.+. .+++++|||+|++|+|+|..|++ .|.+|+++++.+.++
T Consensus 143 ~p~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~~--~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~ 220 (493)
T 1m6i_A 143 TPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISR--EVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNM 220 (493)
T ss_dssp EECCCHHHHTSCHHHHHTEEECCSHHHHHHHHHHHH--HCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTT
T ss_pred CCCCCCCcccccccccCceEEEcCHHHHHHHHHHhh--cCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccc
Confidence 45555555532 358999999999999988776 57999999999999999999987 578999999998888
Q ss_pred CccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchhhhcc-cccc--c
Q 018416 76 ARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTLE--K 152 (356)
Q Consensus 76 ~~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-l~~~--~ 152 (356)
++.+++++.+.+.+.++++||+++++++|++++.+ ++.+ .+++.+|+++++|.||+++|++||+++++.. +..+ +
T Consensus 221 ~~~l~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~-~~~~-~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl~~~~~~ 298 (493)
T 1m6i_A 221 GKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVS-SGKL-LIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDF 298 (493)
T ss_dssp TTTSCHHHHHHHHHHHHTTTCEEECSCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECCCEEECCTTHHHHTCCBCTTT
T ss_pred cccCCHHHHHHHHHHHHhcCCEEEeCCEEEEEEec-CCeE-EEEECCCCEEECCEEEECCCCCccHHHHHHcCCccccCC
Confidence 87789999999999999999999999999999863 3433 6888999999999999999999999987654 6553 4
Q ss_pred CcEEEecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEec-CceEEE
Q 018416 153 GGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVF-TLSWQF 231 (356)
Q Consensus 153 g~I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~-~~~~~~ 231 (356)
|+|.||++||| .|+|||+|||+..++..+|.. +++++..|..||+.||.||+|.. .+|...|+||+.++ +..+..
T Consensus 299 ggi~Vd~~l~t-~~~IyA~GD~a~~~~~~~g~~-~~~~~~~A~~qg~~aa~ni~g~~--~~~~~~~~~~s~~~~~~~~~~ 374 (493)
T 1m6i_A 299 GGFRVNAELQA-RSNIWVAGDAACFYDIKLGRR-RVEHHDHAVVSGRLAGENMTGAA--KPYWHQSMFWSDLGPDVGYEA 374 (493)
T ss_dssp CSEECCTTCEE-ETTEEECGGGEEEEETTTEEE-CCCCHHHHHHHHHHHHHHHTSCC--CCCCCCCEEEEESSTTCEEEE
T ss_pred CcEEECCCccc-CCCeeEeeeeEeccCcccCcc-ccchHHHHHHHHHHHHHHhcCCC--CCcCCcCceeeeeccCcceEE
Confidence 89999999998 699999999999876655543 56789999999999999999875 57888999999987 343444
Q ss_pred e----------ecccc-----e------------------------EEEE----ccC-------CCCceEEEEeeCCeEE
Q 018416 232 Y----------GDNVG-----E------------------------VVHY----GNF-------SGTTFGAYWVNKGRLV 261 (356)
Q Consensus 232 ~----------G~~~~-----~------------------------~~~~----g~~-------~~~~~~~~~~~~g~il 261 (356)
+ |...+ + .... ++. ...+|.++++++|+|+
T Consensus 375 ~g~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (493)
T 1m6i_A 375 IGLVDSSLPTVGVFAKATAQDNPKSATEQSGTGIRSESETESEASEITIPPSTPAVPQAPVQGEDYGKGVIFYLRDKVVV 454 (493)
T ss_dssp EECCCTTSCEEEEEECCCTTCSHHHHHHHHSCSCHHHHSCSCCCC--------------------CCEEEEEEEETTEEE
T ss_pred EeccCCCcceEEeecccccccccccccccccccccccccccccccccccccccccccccccccccCCcEEEEEEeCCEEE
Confidence 4 32110 0 0000 110 1123566889999999
Q ss_pred EEEEeCCCHHHHHHHHHHHHcCCCcCcHHHH
Q 018416 262 GSFLEGGTKEEYEAIAKATRLQPVVEDLAEL 292 (356)
Q Consensus 262 Ga~~vg~~~~~~~~~a~ai~~~~~~~dl~~l 292 (356)
|+.++|. ...+..+..+|+.+.+++++.++
T Consensus 455 g~~~~~~-~~~~~~~~~li~~~~~~~~~~~~ 484 (493)
T 1m6i_A 455 GIVLWNI-FNRMPIARKIIKDGEQHEDLNEV 484 (493)
T ss_dssp EEEEESC-CSCHHHHHHHHHHCCBCSCSTTG
T ss_pred EEEEecC-cchHHHHHHHHhCCCCCCCHHHH
Confidence 9999995 44567778899999998888765
No 46
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=2.4e-35 Score=293.94 Aligned_cols=250 Identities=20% Similarity=0.252 Sum_probs=205.7
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEE
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVA 117 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~ 117 (356)
.+++++|||+|++|+|+|..|++.|.+|+++++.+++++. +++++.+.+.+.+++.||+++++++|++++.+ ++.+ .
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~-~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~-~~~v-~ 266 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRN-FDYDLRQLLNDAMVAKGISIIYEATVSQVQST-ENCY-N 266 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHHTCEEESSCCEEEEEEC-SSSE-E
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccc-cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEee-CCEE-E
Confidence 5899999999999999999999999999999999999987 89999999999999999999999999999874 3333 6
Q ss_pred EEeCCCcEEecCeEEEecCCCCCchh--hh-ccccc-ccCcEEEecccccCCCCEEEEccccccCccccCcccccccHHH
Q 018416 118 VNLRDGNRLPTDMVVVGIGIRPNTSL--FE-GQLTL-EKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDS 193 (356)
Q Consensus 118 v~~~~g~~i~~D~vi~a~G~~p~~~l--~~-~~l~~-~~g~I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~ 193 (356)
+.+.+|+++++|.||+|+|++|++.+ ++ .++.. ++|+|.||+++||+.|+|||+|||+..+ .++..
T Consensus 267 v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~----------~~~~~ 336 (484)
T 3o0h_A 267 VVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIWAVGDVTGHI----------QLTPV 336 (484)
T ss_dssp EEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGGTSC----------CCHHH
T ss_pred EEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCCCCCCEEEEEecCCCC----------cCHHH
Confidence 88899999999999999999999985 33 34666 5688999999999999999999999743 45778
Q ss_pred HHHHHHHHHHHHcCCCCC-CCCCCCCeEEEEecCceEEEeecccceEEEEc------------------cCCCCceEEEE
Q 018416 194 ARKSAKHAVAAIMEPDKT-DKFDYLPFFYSRVFTLSWQFYGDNVGEVVHYG------------------NFSGTTFGAYW 254 (356)
Q Consensus 194 A~~~g~~aa~~i~g~~~~-~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~g------------------~~~~~~~~~~~ 254 (356)
|..||+.+|+||++.... ..+..+|+.+ ++++.++++|+++.++...| ..+..+|.|+.
T Consensus 337 A~~~g~~aa~~i~~~~~~~~~~~~~p~~~--~~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 414 (484)
T 3o0h_A 337 AIHDAMCFVKNAFENTSTTPDYDLITTAV--FSQPEIGTVGLSEEDALHRYKRVEIYRTVFRPMRNVLSGSPEKMFMKLV 414 (484)
T ss_dssp HHHHHHHHHHHHHC---CCCCCTTCCEEE--CCSSCEEEEECCHHHHHHHCSEEEEEEEEECCHHHHHHTCCCCEEEEEE
T ss_pred HHHHHHHHHHHHcCCCCCcCCCCCCcEEE--ECCCCEEEeeCCHHHHHHcCCCEEEEEecCCcchhhccCCCCcEEEEEE
Confidence 999999999999986432 3566677644 56788999999886432111 01123476665
Q ss_pred e--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcCcHHHHhhcCCCcccCcCCC
Q 018416 255 V--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELETQGLGFALAVSQK 306 (356)
Q Consensus 255 ~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~~~~~yap~~~~~ 306 (356)
. ++|+|||+|++|+.+.+ ++.++.||++++|++||.++. .++|.+++.
T Consensus 415 ~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~----~~hPt~~e~ 465 (484)
T 3o0h_A 415 VDGESRIVVGAHVLGENAGEIAQLIGISLKGKLTKDIFDKTM----AVHPTMSEE 465 (484)
T ss_dssp EETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSC----CCSSCSGGG
T ss_pred EECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhccc----cCCCChHHH
Confidence 4 58999999999988655 578899999999999998865 667777776
No 47
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=3.8e-35 Score=295.03 Aligned_cols=277 Identities=19% Similarity=0.284 Sum_probs=210.5
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|+.+++||.+. .+ .+.+++..+ . ..+++++|||+|++|+|+|..|+++|.+||++++. .+++. +|+++
T Consensus 184 ~p~~p~i~G~~~-~~---~t~~~~~~l----~-~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~-~~l~~-~d~~~ 252 (519)
T 3qfa_A 184 RPRYLGIPGDKE-YC---ISSDDLFSL----P-YCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS-ILLRG-FDQDM 252 (519)
T ss_dssp EECCCCCTTHHH-HC---BCHHHHTTC----S-SCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTT-SCHHH
T ss_pred CcCCCCCCCccC-ce---EcHHHHhhh----h-hcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc-ccccc-CCHHH
Confidence 567778888642 22 234444332 1 25789999999999999999999999999999985 67776 89999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCC---CcE-EEEEeCCC-c--EEecCeEEEecCCCCCchh--hhc-cccc--c
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSN---GKV-VAVNLRDG-N--RLPTDMVVVGIGIRPNTSL--FEG-QLTL--E 151 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~---g~v-~~v~~~~g-~--~i~~D~vi~a~G~~p~~~l--~~~-~l~~--~ 151 (356)
.+.+.+.|+++||++++++.+++++..++ +.+ ..+...+| + ++++|.|++++|++||+++ ++. ++.. .
T Consensus 253 ~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~ 332 (519)
T 3qfa_A 253 ANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEK 332 (519)
T ss_dssp HHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTT
T ss_pred HHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCC
Confidence 99999999999999999988888765322 322 22334555 2 5789999999999999985 333 3555 3
Q ss_pred cCcEEEecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCC-CCCCCCCeEEEEecCceEE
Q 018416 152 KGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKT-DKFDYLPFFYSRVFTLSWQ 230 (356)
Q Consensus 152 ~g~I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~-~~~~~~p~~~~~~~~~~~~ 230 (356)
+|+|.||+++||+.|+|||+|||+... ..++..|..||+.||+||++.... ..+..+|+ ..++++.++
T Consensus 333 ~G~I~Vd~~~~Ts~~~IyA~GD~~~g~---------~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~--~~~~~p~~a 401 (519)
T 3qfa_A 333 TGKIPVTDEEQTNVPYIYAIGDILEDK---------VELTPVAIQAGRLLAQRLYAGSTVKCDYENVPT--TVFTPLEYG 401 (519)
T ss_dssp TCCBCCCTTSBCSSTTEEECGGGBSSS---------CCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCE--EECSSSCEE
T ss_pred CCeEeeCCCCccCCCCEEEEEeccCCC---------CccHHHHHHHHHHHHHHHcCCCCccCCCCcCcE--EEECCCceE
Confidence 688999999999999999999998432 146778999999999999986532 34555664 556788999
Q ss_pred EeecccceEEE-------------Ecc--------CCCCceEEEEee---CCeEEEEEEeCCCHHH-HHHHHHHHHcCCC
Q 018416 231 FYGDNVGEVVH-------------YGN--------FSGTTFGAYWVN---KGRLVGSFLEGGTKEE-YEAIAKATRLQPV 285 (356)
Q Consensus 231 ~~G~~~~~~~~-------------~g~--------~~~~~~~~~~~~---~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~ 285 (356)
.+|+++.++.. +.. ....+|.|+..+ +|+|||+|++|+++.+ ++.++.||++++|
T Consensus 402 ~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~~ilGa~i~g~~a~e~i~~~~~ai~~~~t 481 (519)
T 3qfa_A 402 ACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLT 481 (519)
T ss_dssp EEECCHHHHHHHHCGGGEEEEEEEECCHHHHTTTCCTTTEEEEEEEETTTTCEEEEEEEESTTHHHHHHHHHHHHHTTCB
T ss_pred EecCCHHHHHhhCCCCCEEEEEEeccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCC
Confidence 99998754321 100 012357776652 6999999999998655 5778999999999
Q ss_pred cCcHHHHhhcCCCcccCcCCC
Q 018416 286 VEDLAELETQGLGFALAVSQK 306 (356)
Q Consensus 286 ~~dl~~l~~~~~~yap~~~~~ 306 (356)
++||.++. .++|++++.
T Consensus 482 ~~~l~~~~----~~hPt~~E~ 498 (519)
T 3qfa_A 482 KKQLDSTI----GIHPVCAEV 498 (519)
T ss_dssp HHHHHHSC----CCTTCGGGG
T ss_pred HHHHhccc----cCCCChHHH
Confidence 99998765 677888777
No 48
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=4.8e-35 Score=292.07 Aligned_cols=276 Identities=21% Similarity=0.251 Sum_probs=211.6
Q ss_pred CCccCC-CCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHH
Q 018416 4 KLEEFG-LSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPK 82 (356)
Q Consensus 4 ~p~~~~-ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~ 82 (356)
+|..++ +||.+. .++ +.+++..+ . ..+++++|||+|++|+|+|..|+++|.+||++++. .+++. +|++
T Consensus 158 ~p~~p~~i~G~~~-~~~---~~~~~~~~----~-~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~-~~l~~-~d~~ 226 (488)
T 3dgz_A 158 RPRYPTQVKGALE-YGI---TSDDIFWL----K-ESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRS-IPLRG-FDQQ 226 (488)
T ss_dssp EECCCSSCBTHHH-HCB---CHHHHTTC----S-SCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTT-SCHH
T ss_pred CCCCCCCCCCccc-ccC---cHHHHHhh----h-hcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC-ccccc-CCHH
Confidence 467777 888642 222 33443332 1 25789999999999999999999999999999986 46776 8999
Q ss_pred HHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCC---Cc--EEecCeEEEecCCCCCchhh--hc-ccccc--c
Q 018416 83 IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD---GN--RLPTDMVVVGIGIRPNTSLF--EG-QLTLE--K 152 (356)
Q Consensus 83 ~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~---g~--~i~~D~vi~a~G~~p~~~l~--~~-~l~~~--~ 152 (356)
+.+.+.+.|+++||++++++.+++++..+++.+ .+++.+ |+ ++++|.|++++|++|+++++ +. ++..+ +
T Consensus 227 ~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~-~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~ 305 (488)
T 3dgz_A 227 MSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQL-QVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKN 305 (488)
T ss_dssp HHHHHHHHHHHTTCEEEETEEEEEEEECTTSCE-EEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSS
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcE-EEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCC
Confidence 999999999999999999999999987444433 344433 54 47999999999999999874 33 35553 6
Q ss_pred CcEEEecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCC-CCCCCCCeEEEEecCceEEE
Q 018416 153 GGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKT-DKFDYLPFFYSRVFTLSWQF 231 (356)
Q Consensus 153 g~I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~-~~~~~~p~~~~~~~~~~~~~ 231 (356)
|+|.||++|||+.|+|||+|||+.... .++..|..||+.||.||++.... ..+..+|++ .+.++.+++
T Consensus 306 G~i~vd~~~~t~~~~IyA~GD~~~~~~---------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~--~~~~p~~a~ 374 (488)
T 3dgz_A 306 QKIIVDAQEATSVPHIYAIGDVAEGRP---------ELTPTAIKAGKLLAQRLFGKSSTLMDYSNVPTT--VFTPLEYGC 374 (488)
T ss_dssp CCBCCCTTSBCSSTTEEECGGGBTTCC---------CCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEE--ECSSSEEEE
T ss_pred CeEeECCCCccCCCCEEEeEEecCCCC---------cchhHHHHHHHHHHHHHcCCCCccCCCCCCCEE--EECCCCeEE
Confidence 889999999999999999999985321 45778999999999999986532 345567754 456788999
Q ss_pred eecccceEEE--------Ec-----c-----C---CCCceEEEEe---eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCc
Q 018416 232 YGDNVGEVVH--------YG-----N-----F---SGTTFGAYWV---NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVV 286 (356)
Q Consensus 232 ~G~~~~~~~~--------~g-----~-----~---~~~~~~~~~~---~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~ 286 (356)
+|+++.++.. .. . . ...+|.|+.. ++|+|||+|++|+++.+ ++.++.||++++|+
T Consensus 375 vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~ 454 (488)
T 3dgz_A 375 VGLSEEEAVALHGQEHVEVYHAYYKPLEFTVADRDASQCYIKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASY 454 (488)
T ss_dssp EECCHHHHHHHHCGGGEEEEEEECCCHHHHHTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBH
T ss_pred EeCCHHHHHhhCCCCcEEEEEccccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCH
Confidence 9998754211 10 0 1 1235777654 37999999999988655 57889999999999
Q ss_pred CcHHHHhhcCCCcccCcCCC
Q 018416 287 EDLAELETQGLGFALAVSQK 306 (356)
Q Consensus 287 ~dl~~l~~~~~~yap~~~~~ 306 (356)
+||.++. .++|++++.
T Consensus 455 ~~l~~~~----~~hPt~~e~ 470 (488)
T 3dgz_A 455 AQVMQTV----GIHPTCSEE 470 (488)
T ss_dssp HHHHTSC----CCSSCSTHH
T ss_pred HHHhccc----cCCCChHHH
Confidence 9998855 678888877
No 49
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.4e-34 Score=284.84 Aligned_cols=248 Identities=21% Similarity=0.253 Sum_probs=200.3
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEE
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVA 117 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~ 117 (356)
.+++++|||+|++|+|+|..|+++|.+||++++.+++++. +++++.+.+.+.|+++||++++++++++++. +. ..
T Consensus 170 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~---~~-v~ 244 (458)
T 1lvl_A 170 LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT-YDSELTAPVAESLKKLGIALHLGHSVEGYEN---GC-LL 244 (458)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHHTCEEETTCEEEEEET---TE-EE
T ss_pred cCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc-cCHHHHHHHHHHHHHCCCEEEECCEEEEEEe---CC-EE
Confidence 4799999999999999999999999999999999999985 8999999999999999999999999999974 32 33
Q ss_pred EEeCCC--cEEecCeEEEecCCCCCchh--hhc-ccccccCcEEEecccccCCCCEEEEccccccCccccCcccccccHH
Q 018416 118 VNLRDG--NRLPTDMVVVGIGIRPNTSL--FEG-QLTLEKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVD 192 (356)
Q Consensus 118 v~~~~g--~~i~~D~vi~a~G~~p~~~l--~~~-~l~~~~g~I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~ 192 (356)
++..+| +++++|.|++++|++|++++ ++. ++..++++|.||++|||+.|+|||+|||+..+ .++.
T Consensus 245 v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~~i~vd~~~~t~~~~Iya~GD~~~~~----------~~~~ 314 (458)
T 1lvl_A 245 ANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGAAIAIDERCQTSMHNVWAIGDVAGEP----------MLAH 314 (458)
T ss_dssp EECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETTEECCCTTCBCSSTTEEECGGGGCSS----------CCHH
T ss_pred EEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCCEEeECCCCcCCCCCEEEeeccCCCc----------ccHH
Confidence 444456 68999999999999999985 333 35543229999999999999999999999854 3577
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccceE------EEEc------------cCCCCceEEEE
Q 018416 193 SARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEV------VHYG------------NFSGTTFGAYW 254 (356)
Q Consensus 193 ~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~------~~~g------------~~~~~~~~~~~ 254 (356)
.|..||+.+|.||++......+..+| +..+++..++++|.++.++ +..+ ..+..+|.+++
T Consensus 315 ~A~~~g~~aa~~i~g~~~~~~~~~~p--~~~~~~p~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~kl~ 392 (458)
T 1lvl_A 315 RAMAQGEMVAEIIAGKARRFEPAAIA--AVCFTDPEVVVVGKTPEQASQQGLDCIVAQFPFAANGRAMSLESKSGFVRVV 392 (458)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCCSCCC--EEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEE
T ss_pred HHHHHHHHHHHHhcCCCccCCCCCCC--EEEECCCCeEEEeCCHHHHHHcCCCEEEEEEECccchhhhhcCCCcEEEEEE
Confidence 89999999999999854333344556 4567888999999876432 1111 11223577776
Q ss_pred e--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcCcHHHHhhcCCCcccCcCCC
Q 018416 255 V--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELETQGLGFALAVSQK 306 (356)
Q Consensus 255 ~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~~~~~yap~~~~~ 306 (356)
. ++++|+|++++|+.+.+ ++.++.+|++++|++||.++. .++|++++.
T Consensus 393 ~d~~~~~ilG~~~vg~~a~e~i~~~~~ai~~~~~~~~l~~~~----~~~Pt~~e~ 443 (458)
T 1lvl_A 393 ARRDNHLILGWQAVGVAVSELSTAFAQSLEMGACLEDVAGTI----HAHPTLGEA 443 (458)
T ss_dssp EETTTCBEEEEEEEETTGGGHHHHHHHHHHHTCBHHHHHTSC----CCTTCTTHH
T ss_pred EECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCc----CCCCCHHHH
Confidence 6 58999999999987654 678899999999999988765 678888764
No 50
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=3.4e-34 Score=292.75 Aligned_cols=277 Identities=20% Similarity=0.273 Sum_probs=210.3
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|+.+++||.+. .+++ .+++..+ . ..+++++|||||++|+|+|..|+++|.+||++++. .+++. +|+++
T Consensus 260 ~p~~p~i~G~~~-~~~~---~~~~~~~----~-~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~~-~d~~~ 328 (598)
T 2x8g_A 260 RPKYPEIPGAVE-YGIT---SDDLFSL----P-YFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILLRG-FDQQM 328 (598)
T ss_dssp EECCCSSTTHHH-HCEE---HHHHTTC----S-SCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTT-SCHHH
T ss_pred CCCCCCCCCccc-ceEc---HHHHhhC----c-cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCcCc-CCHHH
Confidence 577788888642 2332 2332211 1 25789999999999999999999999999999998 67776 89999
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEc-----CC---CcE-EEEEeCCCcEEe--cCeEEEecCCCCCchhh--hc-ccc
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVD-----SN---GKV-VAVNLRDGNRLP--TDMVVVGIGIRPNTSLF--EG-QLT 149 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~-----~~---g~v-~~v~~~~g~~i~--~D~vi~a~G~~p~~~l~--~~-~l~ 149 (356)
.+.+.+.|+++||++++++.+++++.. ++ +.+ ..+.+.+|++++ +|.|++++|++||++++ +. ++.
T Consensus 329 ~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~ 408 (598)
T 2x8g_A 329 AEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVK 408 (598)
T ss_dssp HHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGGGCCC
T ss_pred HHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchhcCce
Confidence 999999999999999999988888642 12 333 223456787655 99999999999999864 32 365
Q ss_pred c-ccCcEEEecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCC-CCCCCCCCeEEEEecCc
Q 018416 150 L-EKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDK-TDKFDYLPFFYSRVFTL 227 (356)
Q Consensus 150 ~-~~g~I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~-~~~~~~~p~~~~~~~~~ 227 (356)
. ++|+|.||++|||+.|+|||+|||+.... .++..|.+||+.||.+|++... ...+..+|+ ..++++
T Consensus 409 ~~~~G~i~vd~~~~ts~~~VyA~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~--~~~~~~ 477 (598)
T 2x8g_A 409 LDKNGRVVCTDDEQTTVSNVYAIGDINAGKP---------QLTPVAIQAGRYLARRLFAGATELTDYSNVAT--TVFTPL 477 (598)
T ss_dssp BCTTSCBCCCTTSBCSSTTEEECGGGBTTSC---------CCHHHHHHHHHHHHHHHHHCCCCCCCCTTCCE--EECSSS
T ss_pred ECCCCcEEeCCCCcCCCCCEEEEeeecCCCC---------ccHHHHHHhHHHHHHHHhcCCCcccCCCCCcE--EEECCC
Confidence 5 56889999999999999999999965321 4677899999999999997543 234555664 456788
Q ss_pred eEEEeecccceEE--------EEc-----c--------CCCCceEEEEee---CCeEEEEEEeCCCHHH-HHHHHHHHHc
Q 018416 228 SWQFYGDNVGEVV--------HYG-----N--------FSGTTFGAYWVN---KGRLVGSFLEGGTKEE-YEAIAKATRL 282 (356)
Q Consensus 228 ~~~~~G~~~~~~~--------~~g-----~--------~~~~~~~~~~~~---~g~ilGa~~vg~~~~~-~~~~a~ai~~ 282 (356)
.++++|+++.++. ... . ....+|.++..+ +|+|+|+|++|+.+.+ ++.++.||++
T Consensus 478 ~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~ 557 (598)
T 2x8g_A 478 EYGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKM 557 (598)
T ss_dssp CEEEEECCHHHHHHHHCGGGEEEEEEEECCTHHHHTTCCSSCEEEEEEEETTTTTEEEEEEEESTTHHHHHHHHHHHHHT
T ss_pred ceEEEeCCHHHHHhhCCCCcEEEEEEeccchhHHhhcCCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHc
Confidence 8999998764321 110 0 112347776653 8999999999987655 5788999999
Q ss_pred CCCcCcHHHHhhcCCCcccCcCCC
Q 018416 283 QPVVEDLAELETQGLGFALAVSQK 306 (356)
Q Consensus 283 ~~~~~dl~~l~~~~~~yap~~~~~ 306 (356)
++|++||.++ +.++|++++.
T Consensus 558 ~~t~~~l~~~----~~~hPt~~e~ 577 (598)
T 2x8g_A 558 GATKADFDRT----IGIHPTCSET 577 (598)
T ss_dssp TCBHHHHHHS----CCCSSCSGGG
T ss_pred CCCHHHHhhc----cccCCCHHHH
Confidence 9999999884 5788888887
No 51
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.95 E-value=2.5e-28 Score=244.26 Aligned_cols=192 Identities=20% Similarity=0.321 Sum_probs=160.1
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcC---------------CCCcEEEECCchHHHHHHHHHHHC-------
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSC---------------SGGNAVVIGGGYIGMECAASLVIN------- 61 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~---------------~~~~vvVvGgG~iGlE~A~~L~~~------- 61 (356)
+|+.+++||.+ ++.+++++++|+.++++.+... ...+++|||||++|+|+|..|+++
T Consensus 168 ~~~~~~ipG~~-e~a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~ 246 (502)
T 4g6h_A 168 EPNTFGIPGVT-DYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRK 246 (502)
T ss_dssp EECCTTCTTHH-HHCEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHH
T ss_pred ccccCCccCcc-cccCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHh
Confidence 57889999985 6789999999999998765311 124799999999999999999864
Q ss_pred -------CCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCc----EEecCe
Q 018416 62 -------KINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGN----RLPTDM 130 (356)
Q Consensus 62 -------G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~----~i~~D~ 130 (356)
..+||++++.+++++. +++++++.+++.|+++||+++++++|++++. ++.+....+.||+ ++++|+
T Consensus 247 ~~~~~~~~~~V~lve~~~~il~~-~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~--~~~~~~~~~~dg~~~~~~i~ad~ 323 (502)
T 4g6h_A 247 FLPALAEEVQIHLVEALPIVLNM-FEKKLSSYAQSHLENTSIKVHLRTAVAKVEE--KQLLAKTKHEDGKITEETIPYGT 323 (502)
T ss_dssp HCHHHHHHCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHTTCEEETTEEEEEECS--SEEEEEEECTTSCEEEEEEECSE
T ss_pred hcccccccceeEEeccccccccC-CCHHHHHHHHHHHHhcceeeecCceEEEEeC--CceEEEEEecCcccceeeeccCE
Confidence 3689999999999997 8999999999999999999999999999963 4444455566764 699999
Q ss_pred EEEecCCCCCch---hhhc-cccc-ccCcEEEeccccc-CCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHH
Q 018416 131 VVVGIGIRPNTS---LFEG-QLTL-EKGGIKVTGRLQS-SNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAA 204 (356)
Q Consensus 131 vi~a~G~~p~~~---l~~~-~l~~-~~g~I~vd~~l~t-s~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~ 204 (356)
||||+|++|+.. +... .... .+|+|.||++||| ++|+|||+|||+..+.+ +.++.|++||+.+|+|
T Consensus 324 viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p--------~~a~~A~qqg~~~A~n 395 (502)
T 4g6h_A 324 LIWATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAGLP--------PTAQVAHQEAEYLAKN 395 (502)
T ss_dssp EEECCCEECCHHHHHHHHHSGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEESSSC--------CCHHHHHHHHHHHHHH
T ss_pred EEEccCCcCCHHHHhHHHhccccccCCCceeECCccccCCCCCEEEEEcccCCCCC--------CchHHHHHHHHHHHHH
Confidence 999999999953 3332 2333 5689999999999 89999999999987654 6788999999999999
Q ss_pred HcC
Q 018416 205 IME 207 (356)
Q Consensus 205 i~g 207 (356)
|.+
T Consensus 396 i~~ 398 (502)
T 4g6h_A 396 FDK 398 (502)
T ss_dssp HHH
T ss_pred HHH
Confidence 854
No 52
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.92 E-value=1.5e-25 Score=209.46 Aligned_cols=184 Identities=19% Similarity=0.212 Sum_probs=138.0
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|+.+++||.+......+............ .++++++|||+|++|+|+|..|+++|.+||++++.+.+.. +++.
T Consensus 120 ~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~---~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~---~~~~ 193 (314)
T 4a5l_A 120 TAKRMHVPGEDKYWQNGVSACAICDGAVPI---FRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRA---SKTM 193 (314)
T ss_dssp EECCCCCTTHHHHBTTTEESCHHHHTTSGG---GTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHHH
T ss_pred cccccCCCccccccccceeeehhhhhhhhh---cCCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccccc---cchh
Confidence 578899999864433333333333322111 2579999999999999999999999999999999877543 3332
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEe-----CCCcEEecCeEEEecCCCCCchhhhcccccccCcEEEe
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNL-----RDGNRLPTDMVVVGIGIRPNTSLFEGQLTLEKGGIKVT 158 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~-----~~g~~i~~D~vi~a~G~~p~~~l~~~~l~~~~g~I~vd 158 (356)
..+.+...+++.+....+.++... +.....+.+ .+++++++|.|++++|++||++++...+...++++.||
T Consensus 194 ---~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~pn~~~l~~~~~~~~~G~iv~ 269 (314)
T 4a5l_A 194 ---QERVLNHPKIEVIWNSELVELEGD-GDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQVKTADDGYILT 269 (314)
T ss_dssp ---HHHHHTCTTEEEECSEEEEEEEES-SSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTSSCBCTTSCBCC
T ss_pred ---hhhhhcccceeeEeeeeeEEEEee-eeccceeEEeecccccceeeccccceEecccccChhHhcccceEcCCeeEeC
Confidence 344556778999999888888763 333333332 34568999999999999999999987666655556699
Q ss_pred cccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHc
Q 018416 159 GRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIM 206 (356)
Q Consensus 159 ~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 206 (356)
++||||+|+|||+|||+..+. .++..|..||+.||.++.
T Consensus 270 ~~~~Ts~pgIyA~GDv~~~~~---------~~~~~A~~~G~~AA~~~~ 308 (314)
T 4a5l_A 270 EGPKTSVDGVFACGDVCDRVY---------RQAIVAAGSGCMAALSCE 308 (314)
T ss_dssp BTTBCSSTTEEECSTTTCSSC---------CCHHHHHHHHHHHHHHHH
T ss_pred CCCccCCCCEEEEEeccCCcc---------hHHHHHHHHHHHHHHHHH
Confidence 999999999999999998653 346678999999998874
No 53
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.92 E-value=1.7e-24 Score=186.98 Aligned_cols=153 Identities=16% Similarity=0.131 Sum_probs=129.3
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc--------cC-----CHHHHHHHHHHHHhCCCEEEeCCeeeEE
Q 018416 41 NAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR--------LF-----TPKIASYYEEYYKSKGVKFVKGTVLSSF 107 (356)
Q Consensus 41 ~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~--------~~-----d~~~~~~~~~~l~~~GV~v~~~~~v~~i 107 (356)
+++|||||++|+|+|..|++.|.+|+++++.+.++.+ .+ ++++.+.+.+.+++.||+++++ +++++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i 81 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGV 81 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEE
Confidence 6999999999999999999999999999999876631 12 5789999999999999999999 99999
Q ss_pred EEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchhhh-cccccccCcEEEecccccCCCCEEEEccccccCccccCccc
Q 018416 108 DVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFE-GQLTLEKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETR 186 (356)
Q Consensus 108 ~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~-~~l~~~~g~I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~ 186 (356)
+.++++ ..+++++| ++++|.||+|+|.+|+. .+ .+++.++|.|.||+++||+.|+|||+|||+..+.
T Consensus 82 ~~~~~~--~~v~~~~g-~i~ad~vI~A~G~~~~~--~~~~g~~~~~g~i~vd~~~~t~~~~i~a~GD~~~~~~------- 149 (180)
T 2ywl_A 82 RDMGGV--FEVETEEG-VEKAERLLLCTHKDPTL--PSLLGLTRRGAYIDTDEGGRTSYPRVYAAGVARGKVP------- 149 (180)
T ss_dssp EECSSS--EEEECSSC-EEEEEEEEECCTTCCHH--HHHHTCCEETTEECCCTTCBCSSTTEEECGGGGTCCS-------
T ss_pred EEcCCE--EEEEECCC-EEEECEEEECCCCCCCc--cccCCCCccCceEEeCCCCCcCCCCEEEeecccCcch-------
Confidence 874333 45777888 89999999999999853 22 2344457789999999999999999999998753
Q ss_pred ccccHHHHHHHHHHHHHHHcCC
Q 018416 187 RLEHVDSARKSAKHAVAAIMEP 208 (356)
Q Consensus 187 ~~~~~~~A~~~g~~aa~~i~g~ 208 (356)
+++..|..||+.||.||.+.
T Consensus 150 --~~~~~A~~~g~~aa~~i~~~ 169 (180)
T 2ywl_A 150 --GHAIISAGDGAYVAVHLVSD 169 (180)
T ss_dssp --CCHHHHHHHHHHHHHHHHHH
T ss_pred --hhHHHHHHhHHHHHHHHHHH
Confidence 36788999999999999864
No 54
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.92 E-value=2.1e-24 Score=202.16 Aligned_cols=179 Identities=23% Similarity=0.320 Sum_probs=135.4
Q ss_pred CCccCCCCCCCC---CCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCC
Q 018416 4 KLEEFGLSGSDA---ENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFT 80 (356)
Q Consensus 4 ~p~~~~ipG~~~---~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d 80 (356)
+|+.+++||.+. .+++++. ..|.. ..++|+++|||||++|+|+|..|++.|.+||++++++++++..
T Consensus 115 ~~~~~~ipG~~~~~~~~v~~~~-~~~~~-------~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~~-- 184 (312)
T 4gcm_A 115 EYKKIGVPGEQELGGRGVSYCA-VCDGA-------FFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQR-- 184 (312)
T ss_dssp EECCCCCTTTTTTBTTTEESCH-HHHGG-------GGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSCH--
T ss_pred ccCcCCCCChhhhCCccEEeee-ccCcc-------ccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCcch--
Confidence 578899999764 2344322 11211 1268999999999999999999999999999999999987741
Q ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEE---EEe--CCCcEEecCeEEEecCCCCCchhhhcc-cccccCc
Q 018416 81 PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVA---VNL--RDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTLEKGG 154 (356)
Q Consensus 81 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~---v~~--~~g~~i~~D~vi~a~G~~p~~~l~~~~-l~~~~g~ 154 (356)
....+.+++.++.......+...... +..... ... .++..+++|.|++++|.+|++.++... +..++|+
T Consensus 185 ----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~g~~~~~G~ 259 (312)
T 4gcm_A 185 ----ILQDRAFKNDKIDFIWSHTLKSINEK-DGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGY 259 (312)
T ss_dssp ----HHHHHHHHCTTEEEECSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGGGGTCBCTTSC
T ss_pred ----hHHHHHHHhcCcceeeecceeeeecc-ccccccceeeeecCCceeEEeeeeEEeecCCCcCchhHHhcceecCCCe
Confidence 12235677888988888777666542 222111 111 233579999999999999999988766 4457889
Q ss_pred EEEecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHc
Q 018416 155 IKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIM 206 (356)
Q Consensus 155 I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 206 (356)
|.||++||||+|+|||+|||+..+. .++..|+.||+.||.+|.
T Consensus 260 I~vd~~~~Ts~pgIyA~GDv~~~~~---------~~~~~A~~~G~~AA~~i~ 302 (312)
T 4gcm_A 260 IVTKDDMTTSVPGIFAAGDVRDKGL---------RQIVTATGDGSIAAQSAA 302 (312)
T ss_dssp BCCCTTSBCSSTTEEECSTTBSCSC---------CSHHHHHHHHHHHHHHHH
T ss_pred EeeCCCCccCCCCEEEEeecCCCcc---------hHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987432 357789999999999985
No 55
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.91 E-value=4e-24 Score=201.79 Aligned_cols=183 Identities=20% Similarity=0.247 Sum_probs=148.7
Q ss_pred CCccCCCCCCCC---CCeEE-eCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccC
Q 018416 4 KLEEFGLSGSDA---ENVCY-LRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLF 79 (356)
Q Consensus 4 ~p~~~~ipG~~~---~~v~~-l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~ 79 (356)
.|+.+++||.+. .++++ +++.+ ...+++++|||+|++|+|+|..|++.|.+|+++++.+.+++
T Consensus 123 ~p~~~~i~g~~~~~~~~~~~~~~~~~----------~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~--- 189 (335)
T 2zbw_A 123 EPRRIGAPGEREFEGRGVYYAVKSKA----------EFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA--- 189 (335)
T ss_dssp EECCCCCTTTTTTBTTTEESSCSCGG----------GGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS---
T ss_pred CCCCCCCCChhhccCcEEEEecCchh----------hcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc---
Confidence 577788888652 23432 23221 12579999999999999999999999999999999988765
Q ss_pred CHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeC---CC--cEEecCeEEEecCCCCCchhhhcc-cccccC
Q 018416 80 TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR---DG--NRLPTDMVVVGIGIRPNTSLFEGQ-LTLEKG 153 (356)
Q Consensus 80 d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~---~g--~~i~~D~vi~a~G~~p~~~l~~~~-l~~~~g 153 (356)
.++..+.+.+.+++.||++++++.+++++. ++.+..+.+. +| +++++|.|++++|++|++++++.. +..++|
T Consensus 190 ~~~~~~~l~~~l~~~gv~v~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g 267 (335)
T 2zbw_A 190 HEASVKELMKAHEEGRLEVLTPYELRRVEG--DERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLANWGLALEKN 267 (335)
T ss_dssp CHHHHHHHHHHHHTTSSEEETTEEEEEEEE--SSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGGGSCCCEETT
T ss_pred cHHHHHHHHhccccCCeEEecCCcceeEcc--CCCeeEEEEEECCCCceEEEecCEEEEeecCCCCchHhhhcceeccCC
Confidence 467888889999999999999999999986 3444456665 67 579999999999999999877654 555678
Q ss_pred cEEEecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCC
Q 018416 154 GIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEP 208 (356)
Q Consensus 154 ~I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 208 (356)
+|.||+++||+.|+|||+|||+..+.. ..++..|..||+.+|.+|.+.
T Consensus 268 ~i~vd~~~~t~~~~vya~GD~~~~~~~-------~~~~~~A~~~g~~aa~~i~~~ 315 (335)
T 2zbw_A 268 KIKVDTTMATSIPGVYACGDIVTYPGK-------LPLIVLGFGEAAIAANHAAAY 315 (335)
T ss_dssp EEECCTTCBCSSTTEEECSTTEECTTC-------CCCHHHHHHHHHHHHHHHHHH
T ss_pred eeeeCCCCCCCCCCEEEeccccccCcc-------hhhhhhhHHHHHHHHHHHHHH
Confidence 999999999999999999999986431 256888999999999999764
No 56
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.91 E-value=1.8e-24 Score=202.79 Aligned_cols=183 Identities=24% Similarity=0.282 Sum_probs=147.1
Q ss_pred CCccCCCCCCC---CCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCC
Q 018416 4 KLEEFGLSGSD---AENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFT 80 (356)
Q Consensus 4 ~p~~~~ipG~~---~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d 80 (356)
+|+.+++||.+ .++++++.+.++ .+. .+++++|||+|++|+|+|..|++.|.+||++++.+.+. .+
T Consensus 115 ~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~--~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~ 183 (320)
T 1trb_A 115 SARYLGLPSEEAFKGRGVSACATSDG------FFY--RNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR---AE 183 (320)
T ss_dssp EECCCCCHHHHHTBTTTEESCHHHHG------GGG--TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC---CC
T ss_pred CcCCCCCCChHHhCCceeEecccCCc------ccc--CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc---cC
Confidence 45666777753 134554333222 122 57999999999999999999999999999999988764 37
Q ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCC----C--cEEecCeEEEecCCCCCchhhhcccccccCc
Q 018416 81 PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD----G--NRLPTDMVVVGIGIRPNTSLFEGQLTLEKGG 154 (356)
Q Consensus 81 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~----g--~~i~~D~vi~a~G~~p~~~l~~~~l~~~~g~ 154 (356)
+.+.+.+.+.+++.||++++++++++++. +++.+..+++.+ | +++++|.|++++|++|++++++..+..++|+
T Consensus 184 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~~~~l~~~~G~ 262 (320)
T 1trb_A 184 KILIKRLMDKVENGNIILHTNRTLEEVTG-DQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGY 262 (320)
T ss_dssp HHHHHHHHHHHHTSSEEEECSCEEEEEEE-CSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCGGGTTTSCEETTE
T ss_pred HHHHHHHHHhcccCCeEEEcCceeEEEEc-CCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHhcccccccCce
Confidence 88888899999999999999999999987 344565566654 4 5799999999999999999887555555888
Q ss_pred EEEeccc-----ccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcC
Q 018416 155 IKVTGRL-----QSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 207 (356)
Q Consensus 155 I~vd~~l-----~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 207 (356)
|.||++| +|+.|+|||+|||+..+. ..+..|..||+.||.+|..
T Consensus 263 i~vd~~~~~~~~~t~~~~vya~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~ 311 (320)
T 1trb_A 263 IKVQSGIHGNATQTSIPGVFAAGDVMDHIY---------RQAITSAGTGCMAALDAER 311 (320)
T ss_dssp ECCCCSSSSCTTBCSSTTEEECGGGGCSSS---------CCHHHHHHHHHHHHHHHHH
T ss_pred EEECCCcccccccCCCCCEEEcccccCCcc---------hhhhhhhccHHHHHHHHHH
Confidence 9999987 899999999999998642 3577899999999999864
No 57
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.91 E-value=4.7e-24 Score=199.12 Aligned_cols=179 Identities=24% Similarity=0.372 Sum_probs=140.5
Q ss_pred CCccCCCCCCCC---CCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCC
Q 018416 4 KLEEFGLSGSDA---ENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFT 80 (356)
Q Consensus 4 ~p~~~~ipG~~~---~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d 80 (356)
+|+.+++||.+. +.++++.. +.... ..+++++|||+|++|+|+|..|++.|.+||++++.+++. ++
T Consensus 114 ~~~~~~~~g~~~~~~~~~~~~~~------~~~~~--~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~ 182 (310)
T 1fl2_A 114 KWRNMNVPGEDQYRTKGVTYCPH------CDGPL--FKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK---AD 182 (310)
T ss_dssp EECCCCCTTTTTTBTTTEESCHH------HHGGG--GBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC---SC
T ss_pred CcCCCCCCChhhcccceeEEecc------CcHhh--cCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC---cc
Confidence 466677888652 34553321 11122 257999999999999999999999999999999998762 45
Q ss_pred HHHHHHHHHHHHh-CCCEEEeCCeeeEEEEcCCCcEEEEEeCC---Cc--EEecCeEEEecCCCCCchhhhccccc-ccC
Q 018416 81 PKIASYYEEYYKS-KGVKFVKGTVLSSFDVDSNGKVVAVNLRD---GN--RLPTDMVVVGIGIRPNTSLFEGQLTL-EKG 153 (356)
Q Consensus 81 ~~~~~~~~~~l~~-~GV~v~~~~~v~~i~~~~~g~v~~v~~~~---g~--~i~~D~vi~a~G~~p~~~l~~~~l~~-~~g 153 (356)
+. +.+.|++ .||+++++++++++.. +++.+..+++.+ |+ ++++|.|++++|++||+++++..+.. ++|
T Consensus 183 ~~----~~~~l~~~~gv~v~~~~~v~~i~~-~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~l~~~~~g 257 (310)
T 1fl2_A 183 QV----LQDKLRSLKNVDIILNAQTTEVKG-DGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGAVERNRMG 257 (310)
T ss_dssp HH----HHHHHHTCTTEEEESSEEEEEEEE-SSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTTSCBCTTS
T ss_pred HH----HHHHHhhCCCeEEecCCceEEEEc-CCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCchHHhccccccCCC
Confidence 43 4556676 6999999999999987 445555566643 53 68999999999999999888765555 568
Q ss_pred cEEEecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcC
Q 018416 154 GIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 207 (356)
Q Consensus 154 ~I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 207 (356)
+|.||+++||+.|+|||+|||+..+. ..+..|+.||+.||.+|..
T Consensus 258 ~i~vd~~~~t~~~~vya~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~ 302 (310)
T 1fl2_A 258 EIIIDAKCETNVKGVFAAGDCTTVPY---------KQIIIATGEGAKASLSAFD 302 (310)
T ss_dssp CBCCCTTCBCSSTTEEECSTTBSCSS---------CCHHHHHHHHHHHHHHHHH
T ss_pred cEEcCCCCccCCCCEEEeecccCCcc---------hhhhhhHhhHHHHHHHHHH
Confidence 99999999999999999999998653 3577899999999999864
No 58
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.91 E-value=3.3e-24 Score=200.27 Aligned_cols=179 Identities=18% Similarity=0.255 Sum_probs=140.4
Q ss_pred CCccCCCCCCCC---CCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCC
Q 018416 4 KLEEFGLSGSDA---ENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFT 80 (356)
Q Consensus 4 ~p~~~~ipG~~~---~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d 80 (356)
+|+.+++||.+. ++++++++.++. . ..+++++|||+|++|+|+|..|++.|.+||++++.+.+. .+
T Consensus 113 ~~~~~~~~g~~~~~~~~~~~~~~~~~~------~--~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~ 181 (311)
T 2q0l_A 113 SPKRTGIKGESEYWGKGVSTCATCDGF------F--YKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR---CA 181 (311)
T ss_dssp EECCCCCBTHHHHBTTTEESCHHHHGG------G--GTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC---SC
T ss_pred CCCCCCCCChhhccCCcEEEeecCChh------h--cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC---CC
Confidence 466677888642 456654433221 2 257999999999999999999999999999999998763 35
Q ss_pred HHHHHHHHHHHH-hCCCEEEeCCeeeEEEEcCCCcEEEEEeC---CCc--EEecCeEEEecCCCCCchhhhcc-----cc
Q 018416 81 PKIASYYEEYYK-SKGVKFVKGTVLSSFDVDSNGKVVAVNLR---DGN--RLPTDMVVVGIGIRPNTSLFEGQ-----LT 149 (356)
Q Consensus 81 ~~~~~~~~~~l~-~~GV~v~~~~~v~~i~~~~~g~v~~v~~~---~g~--~i~~D~vi~a~G~~p~~~l~~~~-----l~ 149 (356)
+++ .+.+. +.||++++++.++++..+ ++.+..+.+. +|+ ++++|.|++++|++|++++++.. +.
T Consensus 182 ~~~----~~~l~~~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~l~ 256 (311)
T 2q0l_A 182 PIT----LEHAKNNDKIEFLTPYVVEEIKGD-ASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCK 256 (311)
T ss_dssp HHH----HHHHHTCTTEEEETTEEEEEEEEE-TTEEEEEEEEETTTCCEEEEECSEEEECSCEEECCGGGBCTTSCBSSC
T ss_pred HHH----HHHHhhCCCeEEEeCCEEEEEECC-CCcEeEEEEEecCCCceEEEecCEEEEEecCccChhhhhcccccceeE
Confidence 544 34444 479999999999999863 3444456665 675 79999999999999999988754 55
Q ss_pred c-ccCcEEEecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcC
Q 018416 150 L-EKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 207 (356)
Q Consensus 150 ~-~~g~I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 207 (356)
. ++|+|.||+++||+.|+|||+|||+..+. .++..|..||+.||.+|..
T Consensus 257 ~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~ 306 (311)
T 2q0l_A 257 CDEYGSIVVDFSMKTNVQGLFAAGDIRIFAP---------KQVVCAASDGATAALSVIS 306 (311)
T ss_dssp BCTTSCBCCCTTCBCSSTTEEECSTTBTTCC---------CCHHHHHHHHHHHHHHHHH
T ss_pred eccCCCEEeCCccccCCCCeEEcccccCcch---------HHHHHHHHhHHHHHHHHHH
Confidence 5 56899999999999999999999998531 4688899999999999863
No 59
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.91 E-value=5.7e-24 Score=199.67 Aligned_cols=179 Identities=25% Similarity=0.380 Sum_probs=141.3
Q ss_pred CCccCCCCCCCC---CCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCC
Q 018416 4 KLEEFGLSGSDA---ENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFT 80 (356)
Q Consensus 4 ~p~~~~ipG~~~---~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d 80 (356)
+|+.+++||.+. .++++.++.++ .. ..+++++|||+|++|+|+|..|++.|.+||++++.+.+.. +
T Consensus 125 ~~~~~~i~g~~~~~~~~~~~~~~~~~------~~--~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~---~ 193 (319)
T 3cty_A 125 THKHLGVKGESEYFGKGTSYCSTCDG------YL--FKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC---E 193 (319)
T ss_dssp EECCCCCBTTTTTBTTTEESCHHHHG------GG--GBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS---C
T ss_pred CcccCCCCChHHhCCceEEEEEecch------hh--cCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC---C
Confidence 466778888653 35554333221 11 1579999999999999999999999999999999887642 4
Q ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeC---CCc--EEecCeEEEecCCCCCchhhhcc-ccc-ccC
Q 018416 81 PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR---DGN--RLPTDMVVVGIGIRPNTSLFEGQ-LTL-EKG 153 (356)
Q Consensus 81 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~---~g~--~i~~D~vi~a~G~~p~~~l~~~~-l~~-~~g 153 (356)
+. +.+.+++.||+++++++++++.. +++++..+.+. +|+ ++++|.||+++|++||+++++.. +.. ++|
T Consensus 194 ~~----l~~~l~~~gv~i~~~~~v~~i~~-~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~~g 268 (319)
T 3cty_A 194 NA----YVQEIKKRNIPYIMNAQVTEIVG-DGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDERG 268 (319)
T ss_dssp HH----HHHHHHHTTCCEECSEEEEEEEE-SSSSEEEEEEEETTTCCEEEECCSEEEECCCEEECCGGGTTSCCCBCTTS
T ss_pred HH----HHHHHhcCCcEEEcCCeEEEEec-CCceEEEEEEEEcCCCceEEEecCEEEEeeCCccChHHHhhccccccCCc
Confidence 44 45566689999999999999987 34545556664 665 69999999999999999988754 555 568
Q ss_pred cEEEecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcC
Q 018416 154 GIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 207 (356)
Q Consensus 154 ~I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 207 (356)
+|.||++++|+.|+|||+|||+..+. .++..|+.||+.||.+|..
T Consensus 269 ~i~vd~~~~t~~~~vya~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~ 313 (319)
T 3cty_A 269 YIVVDSRQRTSVPGVYAAGDVTSGNF---------AQIASAVGDGCKAALSLYS 313 (319)
T ss_dssp CBCCCTTCBCSSTTEEECSTTBTTCC---------CCHHHHHHHHHHHHHHHHH
T ss_pred cEeCCCCCccCCCCEEEeecccCcch---------hhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998632 4678899999999999864
No 60
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.91 E-value=7.1e-24 Score=199.56 Aligned_cols=179 Identities=23% Similarity=0.328 Sum_probs=140.0
Q ss_pred CCccCCCCCCCC---CCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCC
Q 018416 4 KLEEFGLSGSDA---ENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFT 80 (356)
Q Consensus 4 ~p~~~~ipG~~~---~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d 80 (356)
+|+.+++||.+. +.++++...++ .. ..+++++|||+|++|+|+|..|++.|.+||++++.+.+.. +
T Consensus 122 ~~~~~~i~g~~~~~~~~~~~~~~~~~------~~--~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---~ 190 (325)
T 2q7v_A 122 DPRKLGIPGEDNFWGKGVSTCATCDG------FF--YKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA---N 190 (325)
T ss_dssp EECCCCCTTTTTTBTTTEESCHHHHG------GG--GTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS---C
T ss_pred CcCCCCCCChhhccCceEEEeccCCH------HH--cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc---c
Confidence 467788888753 34554332221 11 2579999999999999999999999999999999987642 4
Q ss_pred HHHHHHHHHHHH-hCCCEEEeCCeeeEEEEcCCCcEEEEEeC---CCc--EEecCeEEEecCCCCCchhhhccccc-ccC
Q 018416 81 PKIASYYEEYYK-SKGVKFVKGTVLSSFDVDSNGKVVAVNLR---DGN--RLPTDMVVVGIGIRPNTSLFEGQLTL-EKG 153 (356)
Q Consensus 81 ~~~~~~~~~~l~-~~GV~v~~~~~v~~i~~~~~g~v~~v~~~---~g~--~i~~D~vi~a~G~~p~~~l~~~~l~~-~~g 153 (356)
+.+ .+.+. +.||+++++++++++.. ++.+..+++. +|+ ++++|.||+++|++||+++++..+.. ++|
T Consensus 191 ~~~----~~~l~~~~gv~i~~~~~v~~i~~--~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g 264 (325)
T 2q7v_A 191 KVA----QARAFANPKMKFIWDTAVEEIQG--ADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAFVKDTVSLRDDG 264 (325)
T ss_dssp HHH----HHHHHTCTTEEEECSEEEEEEEE--SSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTTSCBCTTS
T ss_pred hHH----HHHHHhcCCceEecCCceEEEcc--CCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChHHHhhhcccCCCc
Confidence 443 33344 46999999999999986 3445556664 665 79999999999999999988765554 578
Q ss_pred cEEEecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCC
Q 018416 154 GIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEP 208 (356)
Q Consensus 154 ~I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 208 (356)
+|.||++++|+.|+|||+|||+..+. .++..|..||+.||.+|...
T Consensus 265 ~i~vd~~~~t~~~~vya~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~~ 310 (325)
T 2q7v_A 265 YVDVRDEIYTNIPMLFAAGDVSDYIY---------RQLATSVGAGTRAAMMTERQ 310 (325)
T ss_dssp CBCCBTTTBCSSTTEEECSTTTCSSC---------CCHHHHHHHHHHHHHHHHHH
T ss_pred cEecCCCCccCCCCEEEeecccCccH---------HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999997631 46888999999999999753
No 61
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.91 E-value=8.2e-24 Score=197.24 Aligned_cols=180 Identities=18% Similarity=0.259 Sum_probs=142.9
Q ss_pred CCccCCCCCCCC---CCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCC
Q 018416 4 KLEEFGLSGSDA---ENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFT 80 (356)
Q Consensus 4 ~p~~~~ipG~~~---~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d 80 (356)
+|+.+++||.+. +.+++....+ ... ..+++++|||+|++|+|+|..|.+.|.+|+++++.+.+. .+
T Consensus 117 ~~~~~~~~g~~~~~~~~~~~~~~~~------~~~--~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~---~~ 185 (315)
T 3r9u_A 117 APKKAGFKGEDEFFGKGVSTCATCD------GFF--YKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR---AA 185 (315)
T ss_dssp EECCCCCBTTTTTBTTTEESCHHHH------GGG--GTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB---SC
T ss_pred CCCCCCCCChhhcCCCeEEeeeccc------ccc--cCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC---CC
Confidence 567788898764 5555332221 111 257999999999999999999999999999999998863 34
Q ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeC--CCc--EEecCeEEEecCCCCCchhhhc-----cccc-
Q 018416 81 PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR--DGN--RLPTDMVVVGIGIRPNTSLFEG-----QLTL- 150 (356)
Q Consensus 81 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~--~g~--~i~~D~vi~a~G~~p~~~l~~~-----~l~~- 150 (356)
+++ +.+.+++.||++++++.+++++. +++.+..+++. +|+ ++++|.|++++|.+|++.+++. .+..
T Consensus 186 ~~~---~~~~~~~~gv~~~~~~~v~~i~~-~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~ 261 (315)
T 3r9u_A 186 PST---VEKVKKNEKIELITSASVDEVYG-DKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNME 261 (315)
T ss_dssp HHH---HHHHHHCTTEEEECSCEEEEEEE-ETTEEEEEEEECTTSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSCBC
T ss_pred HHH---HHHHHhcCCeEEEeCcEEEEEEc-CCCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCchhhhcccccceeeec
Confidence 544 34455789999999999999986 34455556655 775 7999999999999999998876 3555
Q ss_pred ccCcEEEecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcC
Q 018416 151 EKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 207 (356)
Q Consensus 151 ~~g~I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 207 (356)
++|+|.||+++||+.|+|||+|||+..+. ..+..|+.||+.||.+|..
T Consensus 262 ~~g~i~vd~~~~t~~~~v~a~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~ 309 (315)
T 3r9u_A 262 EGGQVSVDLKMQTSVAGLFAAGDLRKDAP---------KQVICAAGDGAVAALSAMA 309 (315)
T ss_dssp TTSCBCCCTTCBCSSTTEEECGGGBTTCC---------CCHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEeCCCcccCCCCEEEeecccCCch---------hhhhhHHhhHHHHHHHHHH
Confidence 56899999999999999999999986431 4688899999999999863
No 62
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.91 E-value=3.4e-24 Score=204.69 Aligned_cols=185 Identities=25% Similarity=0.383 Sum_probs=148.4
Q ss_pred CCCccCCCCC-CC-C--CCeEE-eCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc
Q 018416 3 LKLEEFGLSG-SD-A--ENVCY-LRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR 77 (356)
Q Consensus 3 ~~p~~~~ipG-~~-~--~~v~~-l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~ 77 (356)
..|+.+++|| .+ . .++++ +++..+ ..+++++|||+|++|+|+|..|++.|.+|+++++.+.+++.
T Consensus 132 ~~~~~~~i~g~~~~~~~~~v~~~~~~~~~----------~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~ 201 (360)
T 3ab1_A 132 FEPRKLPQLGNIDHLTGSSVYYAVKSVED----------FKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH 201 (360)
T ss_dssp CCBCCCGGGCCCTTTBTTTEESSCSCGGG----------GTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC
T ss_pred CCCCCCCCCCchhhCcCceEEEecCCHHH----------cCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC
Confidence 3677788888 43 2 23432 233221 25799999999999999999999999999999999887653
Q ss_pred cCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeC--CC--cEEecCeEEEecCCCCCchhhhcc-ccccc
Q 018416 78 LFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR--DG--NRLPTDMVVVGIGIRPNTSLFEGQ-LTLEK 152 (356)
Q Consensus 78 ~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~--~g--~~i~~D~vi~a~G~~p~~~l~~~~-l~~~~ 152 (356)
++..+.+.+.+++.||++++++++++++. +++.+..+.+. +| +++++|.||+++|++|++++++.. +..++
T Consensus 202 ---~~~~~~l~~~~~~~gv~i~~~~~v~~i~~-~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~ 277 (360)
T 3ab1_A 202 ---GKTAHEVERARANGTIDVYLETEVASIEE-SNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLELYE 277 (360)
T ss_dssp ---SHHHHSSHHHHHHTSEEEESSEEEEEEEE-ETTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGGGGGSSCCEET
T ss_pred ---HHHHHHHHHHhhcCceEEEcCcCHHHhcc-CCCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHHHHhhcccccc
Confidence 45677788888999999999999999987 34555556664 77 579999999999999999887654 55567
Q ss_pred CcEEEecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCC
Q 018416 153 GGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEP 208 (356)
Q Consensus 153 g~I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 208 (356)
|+|.||+++||+.|+|||+|||+..+.. ..++..|..||+.||.+|.+.
T Consensus 278 g~i~vd~~~~t~~~~vya~GD~~~~~~~-------~~~~~~A~~~g~~aa~~i~~~ 326 (360)
T 3ab1_A 278 NALVVDSHMKTSVDGLYAAGDIAYYPGK-------LKIIQTGLSEATMAVRHSLSY 326 (360)
T ss_dssp TEEECCTTSBCSSTTEEECSTTEECTTC-------CCSHHHHHHHHHHHHHHHHHH
T ss_pred CeeeecCCCcCCCCCEEEecCccCCCCc-------cceeehhHHHHHHHHHHHHhh
Confidence 8999999999999999999999986431 257888999999999999864
No 63
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.90 E-value=1.6e-23 Score=197.45 Aligned_cols=189 Identities=17% Similarity=0.195 Sum_probs=139.4
Q ss_pred CCccCCCCCCCC-CCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHH
Q 018416 4 KLEEFGLSGSDA-ENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPK 82 (356)
Q Consensus 4 ~p~~~~ipG~~~-~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~ 82 (356)
+|..+++||.+. +++|..+.+..+......+....+++++|||+|++|+|+|..|++.|.+||++++.+.+.. .+.
T Consensus 123 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~---~~~ 199 (333)
T 1vdc_A 123 VAKRLSFVGSGEVLGGFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA---SKI 199 (333)
T ss_dssp EECCCCCBTCSSSSSCCBTTTEESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHH
T ss_pred CcCCCCCCCccccccccccCcEEEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc---cHH
Confidence 466677888754 2222211111112222222112579999999999999999999999999999999987643 333
Q ss_pred HHHHHHHHHHhCCCEEEeCCeeeEEEEcCCC-cEEEEEeC---CC--cEEecCeEEEecCCCCCchhhhccccc-ccCcE
Q 018416 83 IASYYEEYYKSKGVKFVKGTVLSSFDVDSNG-KVVAVNLR---DG--NRLPTDMVVVGIGIRPNTSLFEGQLTL-EKGGI 155 (356)
Q Consensus 83 ~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g-~v~~v~~~---~g--~~i~~D~vi~a~G~~p~~~l~~~~l~~-~~g~I 155 (356)
+. ++.+++.||++++++++++++.++++ .+..+.+. +| +++++|.|++++|++|++.+++..+.. ++|+|
T Consensus 200 ~~---~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i 276 (333)
T 1vdc_A 200 MQ---QRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLDGGVELDSDGYV 276 (333)
T ss_dssp HH---HHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTSSCBCTTSCB
T ss_pred HH---HHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHHhhccccccCCCCE
Confidence 22 24456789999999999999873321 55455554 45 579999999999999999988755665 57899
Q ss_pred EEecc-cccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcC
Q 018416 156 KVTGR-LQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 207 (356)
Q Consensus 156 ~vd~~-l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 207 (356)
.||++ ++|+.|+|||+|||+..+. ..+..|..||+.||.+|..
T Consensus 277 ~vd~~~~~t~~~~vya~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~ 320 (333)
T 1vdc_A 277 VTKPGTTQTSVPGVFAAGDVQDKKY---------RQAITAAGTGCMAALDAEH 320 (333)
T ss_dssp CCCTTSCBCSSTTEEECGGGGCSSC---------CCHHHHHHHHHHHHHHHHH
T ss_pred EechhhcccCCCCEEEeeeccCCCc---------hhHHHHHHhHHHHHHHHHH
Confidence 99997 6899999999999998642 3577899999999999864
No 64
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.90 E-value=1.7e-23 Score=196.45 Aligned_cols=181 Identities=19% Similarity=0.278 Sum_probs=143.1
Q ss_pred CCCccCCCCCCCC---CCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccC
Q 018416 3 LKLEEFGLSGSDA---ENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLF 79 (356)
Q Consensus 3 ~~p~~~~ipG~~~---~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~ 79 (356)
.+|+.+++||.+. ..+++ .+.+...+ ++++++|||+|++|+|+|..|++.|.+|+++++.+++.+ .
T Consensus 124 ~~p~~~~~~g~~~~~g~~~~~--~~~~~~~~-------~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~--~ 192 (332)
T 3lzw_A 124 FKPRKLELENAEQYEGKNLHY--FVDDLQKF-------AGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA--H 192 (332)
T ss_dssp CEECCCCCTTGGGGBTTTEES--SCSCGGGG-------BTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS--C
T ss_pred CCCCCCCCCChhhccCceEEE--ecCCHHHc-------CCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc--c
Confidence 3788889999764 34443 33333222 579999999999999999999999999999999988754 2
Q ss_pred CHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCC-----CcEEecCeEEEecCCCCCchhhhcc-cccccC
Q 018416 80 TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD-----GNRLPTDMVVVGIGIRPNTSLFEGQ-LTLEKG 153 (356)
Q Consensus 80 d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~-----g~~i~~D~vi~a~G~~p~~~l~~~~-l~~~~g 153 (356)
++. .+.|++.||++++++.+++++.+ ++ +..+.+.+ ++++++|.|++++|++|++++++.. +..++|
T Consensus 193 ~~~-----~~~l~~~gv~~~~~~~v~~i~~~-~~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~~~~g 265 (332)
T 3lzw_A 193 EHS-----VENLHASKVNVLTPFVPAELIGE-DK-IEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLDIEKN 265 (332)
T ss_dssp HHH-----HHHHHHSSCEEETTEEEEEEECS-SS-CCEEEEEETTSCCEEEEECSEEEECCCEECCCGGGGGSSCCEETT
T ss_pred HHH-----HHHHhcCCeEEEeCceeeEEecC-Cc-eEEEEEEecCCCceEEEECCEEEEeeccCCCchHHhhcCccccCC
Confidence 332 34578899999999999999863 22 34555554 3579999999999999999987764 556789
Q ss_pred cEEEecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCC
Q 018416 154 GIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEP 208 (356)
Q Consensus 154 ~I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 208 (356)
+|.||++++|+.|+|||+|||+..+.. ..++..|..||+.||.+|...
T Consensus 266 ~i~vd~~~~t~~~~vya~GD~~~~~~~-------~~~~~~A~~~g~~aa~~i~~~ 313 (332)
T 3lzw_A 266 SIVVKSTMETNIEGFFAAGDICTYEGK-------VNLIASGFGEAPTAVNNAKAY 313 (332)
T ss_dssp EEECCTTSBCSSTTEEECGGGEECTTC-------CCCHHHHHHHHHHHHHHHHHH
T ss_pred eEEeCCCCceecCCEEEccceecCCCC-------cceEeeehhhHHHHHHHHHHh
Confidence 999999999999999999999975421 257889999999999998753
No 65
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.89 E-value=2.4e-23 Score=195.94 Aligned_cols=181 Identities=20% Similarity=0.233 Sum_probs=140.5
Q ss_pred CCccCCCCCCC---CCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCC
Q 018416 4 KLEEFGLSGSD---AENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFT 80 (356)
Q Consensus 4 ~p~~~~ipG~~---~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d 80 (356)
+|+.+++||.+ ...+++.. .....+....+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++
T Consensus 141 ~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~---- 210 (338)
T 3itj_A 141 SAKRMHLPGEETYWQKGISACA------VCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA---- 210 (338)
T ss_dssp EECCCCCTTHHHHBTTTEESCH------HHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS----
T ss_pred CcCCCCCCCchhccCccEEEch------hcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC----
Confidence 46677888854 23444322 122221122689999999999999999999999999999999988765
Q ss_pred HHHHHHHHHHHHhC-CCEEEeCCeeeEEEEcCCCcEEEEEeCC-----CcEEecCeEEEecCCCCCchhhhccccc-ccC
Q 018416 81 PKIASYYEEYYKSK-GVKFVKGTVLSSFDVDSNGKVVAVNLRD-----GNRLPTDMVVVGIGIRPNTSLFEGQLTL-EKG 153 (356)
Q Consensus 81 ~~~~~~~~~~l~~~-GV~v~~~~~v~~i~~~~~g~v~~v~~~~-----g~~i~~D~vi~a~G~~p~~~l~~~~l~~-~~g 153 (356)
...+.+.+.+. ||++++++.+++++. +++.+..+++.+ ++++++|.||+++|++|++.+++..+.. ++|
T Consensus 211 ---~~~~~~~l~~~~gv~i~~~~~v~~i~~-~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G 286 (338)
T 3itj_A 211 ---STIMQKRAEKNEKIEILYNTVALEAKG-DGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAGQVDTDEAG 286 (338)
T ss_dssp ---CHHHHHHHHHCTTEEEECSEEEEEEEE-SSSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCGGGBTTBCBCTTS
T ss_pred ---CHHHHHHHHhcCCeEEeecceeEEEEc-ccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhHhhCceEecCCC
Confidence 23345556554 999999999999987 445555676655 4679999999999999999998776666 578
Q ss_pred cEEE-ecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcC
Q 018416 154 GIKV-TGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 207 (356)
Q Consensus 154 ~I~v-d~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 207 (356)
+|.+ |++++|+.|+|||+|||+..+. ..+..|+.||+.||.+|..
T Consensus 287 ~i~v~~~~~~t~~~~vya~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~ 332 (338)
T 3itj_A 287 YIKTVPGSSLTSVPGFFAAGDVQDSKY---------RQAITSAGSGCMAALDAEK 332 (338)
T ss_dssp CBCCCTTSSBCSSTTEEECGGGGCSSC---------CCHHHHHHHHHHHHHHHHH
T ss_pred cEEEcCcccccCCCCEEEeeccCCCCc---------cceeeehhhhHHHHHHHHH
Confidence 8885 8899999999999999997432 4578899999999999864
No 66
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.89 E-value=7.2e-23 Score=191.31 Aligned_cols=181 Identities=25% Similarity=0.339 Sum_probs=141.7
Q ss_pred CCccCCCCCCCC---CCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCC
Q 018416 4 KLEEFGLSGSDA---ENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFT 80 (356)
Q Consensus 4 ~p~~~~ipG~~~---~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d 80 (356)
+|+.+++||.+. +++++. ...+. . ...+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++ +
T Consensus 124 ~~~~~~i~g~~~~~~~~~~~~-~~~~~-----~--~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~---~ 192 (323)
T 3f8d_A 124 KRRKLGVPGEQEFAGRGISYC-SVADA-----P--LFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA---Q 192 (323)
T ss_dssp EECCCCCTTTTTTBTTTEESC-HHHHG-----G--GGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS---C
T ss_pred CCccCCCCchhhhcCCceEEe-ccCCH-----h--HcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc---C
Confidence 367788898765 555432 11121 1 12579999999999999999999999999999999998766 3
Q ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCC---Cc--EEecCeEEEecCCCCCchhhhcc-ccc-ccC
Q 018416 81 PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD---GN--RLPTDMVVVGIGIRPNTSLFEGQ-LTL-EKG 153 (356)
Q Consensus 81 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~---g~--~i~~D~vi~a~G~~p~~~l~~~~-l~~-~~g 153 (356)
+++ +++.+++.||++++++++++++.+ +.+..+++.+ |+ ++++|.|++++|++|++++++.. +.. ++|
T Consensus 193 ~~~---~~~~~~~~gv~~~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~g~~~~~~g 267 (323)
T 3f8d_A 193 PIY---VETVKKKPNVEFVLNSVVKEIKGD--KVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNG 267 (323)
T ss_dssp HHH---HHHHHTCTTEEEECSEEEEEEEES--SSEEEEEEEETTTCCEEEEECSEEEECCCEECCHHHHHHTTCCBCTTS
T ss_pred HHH---HHHHHhCCCcEEEeCCEEEEEecc--CceeEEEEEECCCCceEEEEcCEEEEEECCCCChhHHhhcCeeecCCC
Confidence 332 233334559999999999999863 4555666655 76 79999999999999999887654 665 679
Q ss_pred cEEEecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcC
Q 018416 154 GIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 207 (356)
Q Consensus 154 ~I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 207 (356)
+|.||++++|+.|+|||+|||+..+ .....+..|..||+.||.+|..
T Consensus 268 ~i~vd~~~~t~~~~vya~GD~~~~~-------~~~~~~~~A~~~g~~aa~~i~~ 314 (323)
T 3f8d_A 268 YIKVDEWMRTSVPGVFAAGDCTSAW-------LGFRQVITAVAQGAVAATSAYR 314 (323)
T ss_dssp SBCCCTTCBCSSTTEEECSTTBSTT-------TTCCCHHHHHHHHHHHHHHHHH
T ss_pred cEecCCCceecCCCEEEcceecCCC-------CcccceeehhhHHHHHHHHHHH
Confidence 9999999999999999999999863 0125688999999999999864
No 67
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.88 E-value=1.1e-22 Score=201.06 Aligned_cols=186 Identities=22% Similarity=0.339 Sum_probs=140.2
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHH----------HhcCCCCcEEEECCchHHHHHHHHHHHCCCc-EEEEeeCC
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNV----------MKSCSGGNAVVIGGGYIGMECAASLVINKIN-VTMVFPEA 72 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~----------l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~-Vtlv~~~~ 72 (356)
.|+.+++||.+.++|++..++-........ .....+++|+|||||++|+|+|..+.+.|.+ ||+++|++
T Consensus 219 ~~~~~~ipG~~~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 219 KARDIKAPGSGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp EECCTTCSCCTTTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCCCCCCCCCcCCCcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 477889999998999864332221111100 0113579999999999999999999999984 99999998
Q ss_pred cc-CCccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEe---------C---------CC--cEEecCeE
Q 018416 73 HC-MARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNL---------R---------DG--NRLPTDMV 131 (356)
Q Consensus 73 ~~-l~~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~---------~---------~g--~~i~~D~v 131 (356)
.. ++. .+.+ .+.+++.||++++++.++++.. ++++..+++ . +| +++++|.|
T Consensus 299 ~~~~p~-~~~e-----~~~~~~~Gv~~~~~~~~~~i~~--~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~V 370 (456)
T 2vdc_G 299 RKNMPG-SQRE-----VAHAEEEGVEFIWQAAPEGFTG--DTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLV 370 (456)
T ss_dssp STTCSS-CHHH-----HHHHHHTTCEEECCSSSCCEEE--EEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEE
T ss_pred ccCCCC-CHHH-----HHHHHHCCCEEEeCCCceEEeC--CCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEE
Confidence 76 664 3433 2457788999999999999875 343321221 1 23 46999999
Q ss_pred EEecCCCCCch--hhhcc-ccc-ccCcEEEecc-cccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHc
Q 018416 132 VVGIGIRPNTS--LFEGQ-LTL-EKGGIKVTGR-LQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIM 206 (356)
Q Consensus 132 i~a~G~~p~~~--l~~~~-l~~-~~g~I~vd~~-l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 206 (356)
|+++|++|++. +++.. +.. .+|+|.||++ ++|+.|+|||+|||+..+ .++..|+.||+.||.+|.
T Consensus 371 i~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~~Ts~~~VfA~GD~~~g~----------~~v~~A~~~G~~aA~~i~ 440 (456)
T 2vdc_G 371 IKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRGA----------SLVVWAIRDGRDAAEGIH 440 (456)
T ss_dssp EECSCEECCCHHHHHHSTTSCBCTTSSBCCCTTTCBCSSTTEEECGGGGSSC----------CSHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCcchhhcccCCeeECCCCCEEECCCCCcCCCCCEEEeccccCCc----------hHHHHHHHHHHHHHHHHH
Confidence 99999999986 55543 655 6789999998 999999999999998764 357889999999999987
Q ss_pred C
Q 018416 207 E 207 (356)
Q Consensus 207 g 207 (356)
.
T Consensus 441 ~ 441 (456)
T 2vdc_G 441 A 441 (456)
T ss_dssp H
T ss_pred H
Confidence 4
No 68
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.88 E-value=5.4e-23 Score=190.08 Aligned_cols=171 Identities=19% Similarity=0.138 Sum_probs=136.1
Q ss_pred CCccCCCCCCCC---CCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCC
Q 018416 4 KLEEFGLSGSDA---ENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFT 80 (356)
Q Consensus 4 ~p~~~~ipG~~~---~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d 80 (356)
+|+.+++||.+. .++++.. ..+. . ...+++++|||+|++|+|+|..|++.| +|+++++.+. . ++
T Consensus 111 ~~~~~~~~g~~~~~~~~~~~~~-~~~~------~-~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~---~-~~ 177 (297)
T 3fbs_A 111 TDELPEIAGLRERWGSAVFHCP-YCHG------Y-ELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV---E-PD 177 (297)
T ss_dssp EEECCCCBTTGGGBTTTEESCH-HHHT------G-GGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC---C-CC
T ss_pred CCCCCCCCCchhhcCCeeEEcc-cCcc------h-hhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC---C-CC
Confidence 466778888753 4555332 1111 1 125899999999999999999999999 9999998876 2 44
Q ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchhhhcc-cccc---cC-cE
Q 018416 81 PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTLE---KG-GI 155 (356)
Q Consensus 81 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-l~~~---~g-~I 155 (356)
+. +.+.|++.||+++. +++++++. ++ .+++.+|+++++|.|++++|++|++++++.. +..+ +| +|
T Consensus 178 ~~----~~~~l~~~gv~i~~-~~v~~i~~--~~---~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~g~~~~~~~~G~~i 247 (297)
T 3fbs_A 178 AD----QHALLAARGVRVET-TRIREIAG--HA---DVVLADGRSIALAGLFTQPKLRITVDWIEKLGCAVEEGPMGSTI 247 (297)
T ss_dssp HH----HHHHHHHTTCEEEC-SCEEEEET--TE---EEEETTSCEEEESEEEECCEEECCCSCHHHHTCCEEEETTEEEE
T ss_pred HH----HHHHHHHCCcEEEc-ceeeeeec--CC---eEEeCCCCEEEEEEEEEccCcccCchhHHhcCCccccCCCCceE
Confidence 43 46778899999995 89999974 22 5788999999999999999999999887654 5543 35 79
Q ss_pred EEecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcC
Q 018416 156 KVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 207 (356)
Q Consensus 156 ~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 207 (356)
.||++++|+.|+|||+|||+..+ ..+..|..||+.||.+|..
T Consensus 248 ~vd~~~~t~~~~vya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~ 289 (297)
T 3fbs_A 248 VTDPMKQTTARGIFACGDVARPA----------GSVALAVGDGAMAGAAAHR 289 (297)
T ss_dssp CCCTTCBCSSTTEEECSGGGCTT----------CCHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCccCCCCEEEEeecCCch----------HHHHHHHHhHHHHHHHHHH
Confidence 99999999999999999999863 4678899999999999864
No 69
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.88 E-value=2.1e-22 Score=195.91 Aligned_cols=187 Identities=20% Similarity=0.248 Sum_probs=154.9
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCch-------------------------HHHHHH---
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGY-------------------------IGMECA--- 55 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~-------------------------iGlE~A--- 55 (356)
+|+.+++||.+. +++++.+.+++.++++.+.... ++++|||+|+ +|+|+|
T Consensus 112 ~~~~~~ipG~~~-~~~~~~~~~~~~~~~~~l~~~~-~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~ 189 (409)
T 3h8l_A 112 HLATELVKGWDK-YGYSVCEPEFATKLREKLESFQ-GGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLML 189 (409)
T ss_dssp EECGGGSBTHHH-HCEESSSTTHHHHHHHHHHHCC-SEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHH
T ss_pred CcCccCCCChhh-cCcCcCCHHHHHHHHHHHHHhc-CCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHH
Confidence 567778898763 6788899999999999887643 5677999992 577877
Q ss_pred -HHHHHCCC----cEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCe
Q 018416 56 -ASLVINKI----NVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDM 130 (356)
Q Consensus 56 -~~L~~~G~----~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~ 130 (356)
..|.+.|. +|+++++.+ +++. +++++.+.+.+.|++.||+++++++|++++. + .+.+++|+++++|.
T Consensus 190 ~~~l~~~g~~~~~~v~~~~~~~-~l~~-~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~----~v~~~~g~~~~~D~ 261 (409)
T 3h8l_A 190 HGYFKKKGMLDKVHVTVFSPGE-YLSD-LSPNSRKAVASIYNQLGIKLVHNFKIKEIRE--H----EIVDEKGNTIPADI 261 (409)
T ss_dssp HHHHHTTTCTTTEEEEEECSSS-SSTT-BCHHHHHHHHHHHHHHTCEEECSCCEEEECS--S----EEEETTSCEEECSE
T ss_pred HHHHHHcCCCCCeEEEEEeCCc-cccc-cCHHHHHHHHHHHHHCCCEEEcCCceEEECC--C----eEEECCCCEEeeeE
Confidence 45567784 899999998 7776 8999999999999999999999999999964 2 36788999999999
Q ss_pred EEEecCCCCCchhhhc--ccccccCcEEEeccccc-CCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcC
Q 018416 131 VVVGIGIRPNTSLFEG--QLTLEKGGIKVTGRLQS-SNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 207 (356)
Q Consensus 131 vi~a~G~~p~~~l~~~--~l~~~~g~I~vd~~l~t-s~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 207 (356)
+++++|.+|+..+.+. .+..++|+|.||+++|| +.|+|||+|||+..+.+ ..+..|..||+.||.||.+
T Consensus 262 vi~a~G~~~~~~l~~~~~~l~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~~~~--------~~~~~A~~q~~~aa~~i~~ 333 (409)
T 3h8l_A 262 TILLPPYTGNPALKNSTPDLVDDGGFIPTDLNMVSIKYDNVYAVGDANSMTVP--------KLGYLAVMTGRIAAQHLAN 333 (409)
T ss_dssp EEEECCEECCHHHHTSCGGGSCTTSCBCBBTTSBBSSCTTEEECGGGBTTCCS--------CCHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCccHHHHhccccCcCCCCCEEeCcccccCCCCCEEEeehhccCCCC--------cHHHHHHHHHHHHHHHHHH
Confidence 9999999999655554 24346788999999999 99999999999986432 4677899999999999976
Q ss_pred C
Q 018416 208 P 208 (356)
Q Consensus 208 ~ 208 (356)
.
T Consensus 334 ~ 334 (409)
T 3h8l_A 334 R 334 (409)
T ss_dssp H
T ss_pred H
Confidence 4
No 70
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.88 E-value=2e-22 Score=202.40 Aligned_cols=179 Identities=26% Similarity=0.390 Sum_probs=142.0
Q ss_pred CCccCCCCCCC---CCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCC
Q 018416 4 KLEEFGLSGSD---AENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFT 80 (356)
Q Consensus 4 ~p~~~~ipG~~---~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d 80 (356)
+|+.+++||.+ ..+++++...+. .+ ..+++++|||+|++|+|+|..|++.|.+||++++.++++. +
T Consensus 325 ~~~~~~ipG~~~~~~~~v~~~~~~~~------~~--~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~---~ 393 (521)
T 1hyu_A 325 KWRNMNVPGEDQYRTKGVTYCPHCDG------PL--FKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA---D 393 (521)
T ss_dssp EECCCCCTTTTTTTTTTEECCTTCCG------GG--GBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS---C
T ss_pred CcCCCCCCChhhhcCceEEEeecCch------hh--cCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc---C
Confidence 46667888864 245665433211 11 2589999999999999999999999999999999988654 3
Q ss_pred HHHHHHHHHHHHh-CCCEEEeCCeeeEEEEcCCCcEEEEEeCC---Cc--EEecCeEEEecCCCCCchhhhccccc-ccC
Q 018416 81 PKIASYYEEYYKS-KGVKFVKGTVLSSFDVDSNGKVVAVNLRD---GN--RLPTDMVVVGIGIRPNTSLFEGQLTL-EKG 153 (356)
Q Consensus 81 ~~~~~~~~~~l~~-~GV~v~~~~~v~~i~~~~~g~v~~v~~~~---g~--~i~~D~vi~a~G~~p~~~l~~~~l~~-~~g 153 (356)
..+.+.|++ .||++++++.++++.. +++++..+.+.+ |+ ++++|.|++++|.+||+++++..+.. .+|
T Consensus 394 ----~~l~~~l~~~~gV~v~~~~~v~~i~~-~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l~~~l~~~~~G 468 (521)
T 1hyu_A 394 ----QVLQDKVRSLKNVDIILNAQTTEVKG-DGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLEGALERNRMG 468 (521)
T ss_dssp ----HHHHHHHTTCTTEEEECSEEEEEEEE-CSSSEEEEEEEETTTCCEEEEECSEEEECCCEEESCGGGTTTSCBCTTS
T ss_pred ----HHHHHHHhcCCCcEEEeCCEEEEEEc-CCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchHHhhhhccCCCC
Confidence 345666777 6999999999999987 455665666643 54 68999999999999999988766655 578
Q ss_pred cEEEecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcC
Q 018416 154 GIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 207 (356)
Q Consensus 154 ~I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 207 (356)
+|.||++++|+.|+|||+|||+..+. ..+..|+.||+.||.+|..
T Consensus 469 ~I~Vd~~~~ts~p~VfA~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~ 513 (521)
T 1hyu_A 469 EIIIDAKCETSVKGVFAAGDCTTVPY---------KQIIIATGEGAKASLSAFD 513 (521)
T ss_dssp CBCCCTTCBCSSTTEEECSTTBCCSS---------CCHHHHHHHHHHHHHHHHH
T ss_pred cEEeCCCCCCCCCCEEEeecccCCCc---------ceeeehHHhHHHHHHHHHH
Confidence 99999999999999999999998653 3577899999999998863
No 71
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.88 E-value=1.5e-21 Score=191.86 Aligned_cols=203 Identities=17% Similarity=0.098 Sum_probs=152.6
Q ss_pred CCccCCCCCCCC--CCeEEeCCHHHHHHHHHHHhcC-CCCcEEEECCch----HH--HHHH----HHHHHCCCc-----E
Q 018416 4 KLEEFGLSGSDA--ENVCYLRDLADANRLVNVMKSC-SGGNAVVIGGGY----IG--MECA----ASLVINKIN-----V 65 (356)
Q Consensus 4 ~p~~~~ipG~~~--~~v~~l~~~~da~~i~~~l~~~-~~~~vvVvGgG~----iG--lE~A----~~L~~~G~~-----V 65 (356)
+|+.+++||.+. .+++.+.+++++.++++.++.. .+++++|||+|. +| +|+| ..++++|.+ |
T Consensus 111 ~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~V 190 (437)
T 3sx6_A 111 KLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSF 190 (437)
T ss_dssp EECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCE
T ss_pred CcCcccCCCCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEE
Confidence 577788999875 4788899999999888765432 245678888854 44 7777 666788875 9
Q ss_pred EEEeeCCccCCccC--CHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCC-----CcEEecCeEEEecCCC
Q 018416 66 TMVFPEAHCMARLF--TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD-----GNRLPTDMVVVGIGIR 138 (356)
Q Consensus 66 tlv~~~~~~l~~~~--d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~-----g~~i~~D~vi~a~G~~ 138 (356)
|++++.+.+.+..+ .++..+.+++.|+++||++++++++++++. ++........+ ++++++|.+++++|.+
T Consensus 191 tlv~~~~~~~~~~l~~~~~~~~~~~~~l~~~gI~~~~~~~v~~v~~--~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~ 268 (437)
T 3sx6_A 191 TFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIEAYTNCKVTKVED--NKMYVTQVDEKGETIKEMVLPVKFGMMIPAFK 268 (437)
T ss_dssp EEEESSSSTTCTTTTCCTTHHHHHHHHHHHTTCEEECSEEEEEEET--TEEEEEEECTTSCEEEEEEEECSEEEEECCEE
T ss_pred EEEcCCccccccccCcchHHHHHHHHHHHHCCCEEEcCCEEEEEEC--CeEEEEecccCCccccceEEEEeEEEEcCCCc
Confidence 99999998743211 145888999999999999999999999974 32111111233 5679999999999999
Q ss_pred CCchhhhc-ccccccCcEEEeccccc-CCCCEEEEccccccCccccCccc---ccccHHHHHHHHHHHHHHHcCCC
Q 018416 139 PNTSLFEG-QLTLEKGGIKVTGRLQS-SNSSVYAVGDVAAFPLKLLGETR---RLEHVDSARKSAKHAVAAIMEPD 209 (356)
Q Consensus 139 p~~~l~~~-~l~~~~g~I~vd~~l~t-s~~~VyAiGD~~~~~~~~~g~~~---~~~~~~~A~~~g~~aa~~i~g~~ 209 (356)
|+..+.+. ++..++|+|.||++||| ++|+|||+|||+..+... +.+. ...++..|..||+.+|+||....
T Consensus 269 ~~~~~~~~~gl~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~-~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l 343 (437)
T 3sx6_A 269 GVPAVAGVEGLCNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVE-TTPVPTGAPKTGYMIESMVSAAVHNIKADL 343 (437)
T ss_dssp CCHHHHTSTTTBCTTSCBCBCTTSBBSSCTTEEECGGGBCCCCSC-CCSSCCCCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred CchhhhccccccCCCCcEEeChhccCCCCCCEEEEEEEeccCCcC-CCcCCCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 98777653 35447789999999999 999999999999876421 1111 23578899999999999998543
No 72
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.88 E-value=9.6e-23 Score=192.84 Aligned_cols=179 Identities=23% Similarity=0.305 Sum_probs=135.6
Q ss_pred CCccCCCCCCCC---CCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCC
Q 018416 4 KLEEFGLSGSDA---ENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFT 80 (356)
Q Consensus 4 ~p~~~~ipG~~~---~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d 80 (356)
+|+.+++||.+. +.++++.+.++ .+. .+++++|||+|++|+|+|..|++.|.+||++++.+.+.. .
T Consensus 125 ~~~~~~i~g~~~~~~~~~~~~~~~~~------~~~--~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~---~ 193 (335)
T 2a87_A 125 AARYLQVPGEQELLGRGVSSCATCDG------FFF--RDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA---S 193 (335)
T ss_dssp EECCCCCTHHHHTBTTTEESCHHHHG------GGG--TTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS---C
T ss_pred CccCCCCCchHhccCCceEEeeccch------hhc--CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc---c
Confidence 456677887542 34543332222 222 579999999999999999999999999999999987643 2
Q ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeC---CC--cEEecCeEEEecCCCCCchhhhccccc-ccCc
Q 018416 81 PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR---DG--NRLPTDMVVVGIGIRPNTSLFEGQLTL-EKGG 154 (356)
Q Consensus 81 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~---~g--~~i~~D~vi~a~G~~p~~~l~~~~l~~-~~g~ 154 (356)
+.+. .+.+++.||++++++++++++.+ +.+..+.+. +| +++++|.|++++|++|++++++..+.. ++|+
T Consensus 194 ~~~~---~~~~~~~gV~v~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~ 268 (335)
T 2a87_A 194 KIML---DRARNNDKIRFLTNHTVVAVDGD--TTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVREAIDVDPDGY 268 (335)
T ss_dssp TTHH---HHHHHCTTEEEECSEEEEEEECS--SSCCEEEEEEETTSCCEEECCSCEEECSCEEECCTTTBTTBCBCTTSC
T ss_pred HHHH---HHHhccCCcEEEeCceeEEEecC--CcEeEEEEEEcCCCceEEeecCEEEEccCCccChhHhhcccccCCCcc
Confidence 2221 24456799999999999999863 232334443 45 579999999999999999988755665 5789
Q ss_pred EEEecc-cccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcC
Q 018416 155 IKVTGR-LQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 207 (356)
Q Consensus 155 I~vd~~-l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 207 (356)
|.||++ ++|+.|+|||+|||+..+. ..+..|..||+.||.+|..
T Consensus 269 i~vd~~~~~t~~~~iya~GD~~~~~~---------~~~~~A~~~g~~aA~~i~~ 313 (335)
T 2a87_A 269 VLVQGRTTSTSLPGVFAAGDLVDRTY---------RQAVTAAGSGCAAAIDAER 313 (335)
T ss_dssp BCCSTTSSBCSSTTEEECGGGTCCSC---------CCHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCccCCCCEEEeeecCCccH---------HHHHHHHHhHHHHHHHHHH
Confidence 999986 6899999999999998642 3577899999999998863
No 73
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.87 E-value=1.2e-22 Score=201.02 Aligned_cols=192 Identities=14% Similarity=0.173 Sum_probs=140.2
Q ss_pred CccCCCCCCCCCCeEEeCCHHHHHHH-HH--HHh-cCCCCcEEEECCchHHHHHHHHHH--------------------H
Q 018416 5 LEEFGLSGSDAENVCYLRDLADANRL-VN--VMK-SCSGGNAVVIGGGYIGMECAASLV--------------------I 60 (356)
Q Consensus 5 p~~~~ipG~~~~~v~~l~~~~da~~i-~~--~l~-~~~~~~vvVvGgG~iGlE~A~~L~--------------------~ 60 (356)
|+.+++||.+.+++++.+++.....- .+ .+. ...+++++|||+|++|+|+|..|+ +
T Consensus 107 ~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~ 186 (460)
T 1cjc_A 107 HQALDIPGEELPGVFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQ 186 (460)
T ss_dssp ECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHT
T ss_pred CCCCCCCCCCCCcEEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhh
Confidence 46789999988999976654211100 00 001 124789999999999999999999 6
Q ss_pred CCC-cEEEEeeCCccC--------------Cc--------cCC----------HH---HHHHHHHHHHh-----------
Q 018416 61 NKI-NVTMVFPEAHCM--------------AR--------LFT----------PK---IASYYEEYYKS----------- 93 (356)
Q Consensus 61 ~G~-~Vtlv~~~~~~l--------------~~--------~~d----------~~---~~~~~~~~l~~----------- 93 (356)
.|. +|++++|++.+. +. .++ .. +.+.+.+.+++
T Consensus 187 ~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 266 (460)
T 1cjc_A 187 SRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRA 266 (460)
T ss_dssp CCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred CCCcEEEEEEcCChHhhccCHHHHHHhhcCCCceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCC
Confidence 787 799999998752 21 011 10 33444455555
Q ss_pred ---CCCEEEeCCeeeEEEEcCCC-cEEEEEeC---------------CC--cEEecCeEEEecCCCCCchhhhccc-cc-
Q 018416 94 ---KGVKFVKGTVLSSFDVDSNG-KVVAVNLR---------------DG--NRLPTDMVVVGIGIRPNTSLFEGQL-TL- 150 (356)
Q Consensus 94 ---~GV~v~~~~~v~~i~~~~~g-~v~~v~~~---------------~g--~~i~~D~vi~a~G~~p~~~l~~~~l-~~- 150 (356)
+||++++++.++++..++++ .+..+++. +| +++++|+||+++|++|++ + .++ ..
T Consensus 267 ~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~-l--~gl~~~d 343 (460)
T 1cjc_A 267 SASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP-I--DPSVPFD 343 (460)
T ss_dssp TCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCC-C--CTTSCCB
T ss_pred CCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCC-C--CCCcccc
Confidence 89999999999999874335 55555543 34 579999999999999998 3 345 55
Q ss_pred ccCcEEEecccccC-CCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCC
Q 018416 151 EKGGIKVTGRLQSS-NSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEP 208 (356)
Q Consensus 151 ~~g~I~vd~~l~ts-~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 208 (356)
++++|.||+++||+ .|+|||+|||+..+. ..+..|+.+|+.+|.+|++.
T Consensus 344 ~~g~i~vn~~~rt~~~p~vya~Gd~~~g~~---------~~i~~a~~~g~~aa~~i~~~ 393 (460)
T 1cjc_A 344 PKLGVVPNMEGRVVDVPGLYCSGWVKRGPT---------GVITTTMTDSFLTGQILLQD 393 (460)
T ss_dssp TTTTBCCEETTEETTCTTEEECTHHHHCTT---------CCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCeeECCCCcCcCCCCEEEEEeCCcCCC---------ccHHHHHHHHHHHHHHHHHH
Confidence 56899999999998 799999999997543 24667999999999998754
No 74
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.87 E-value=2e-22 Score=188.28 Aligned_cols=175 Identities=10% Similarity=0.070 Sum_probs=131.8
Q ss_pred CCccCCCCCCCC---CCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCch-HHHHHHHHHHHCCCcEEEEeeCCccCCccC
Q 018416 4 KLEEFGLSGSDA---ENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGY-IGMECAASLVINKINVTMVFPEAHCMARLF 79 (356)
Q Consensus 4 ~p~~~~ipG~~~---~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~-iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~ 79 (356)
+|+.+++||.+. .++++.... .... .++++++|||||. +++|+|..+.+.+.+||++.+.+.+
T Consensus 116 ~p~~p~i~G~~~~~~~~v~~~~~~------~~~~--~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~----- 182 (304)
T 4fk1_A 116 QEEFPSIPNVREYYGKSLFSCPYC------DGWE--LKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNEL----- 182 (304)
T ss_dssp EEECCSCTTHHHHBTTTEESCHHH------HSGG--GTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCC-----
T ss_pred ccccccccCccccccceeeecccc------chhH--hcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccccc-----
Confidence 578889999642 345432211 1111 1567788888775 5789999999999999999887653
Q ss_pred CHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchhhhc-cccc-ccCcEEE
Q 018416 80 TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEG-QLTL-EKGGIKV 157 (356)
Q Consensus 80 d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~-~l~~-~~g~I~v 157 (356)
.+ .+.+.|+++|++++++. ++.+.. +++.+..+++++|+++++|.++++.|.+|++.+++. ++++ ++|+|.|
T Consensus 183 ~~----~~~~~l~~~g~~~~~~~-v~~~~~-~~~~~~~v~~~~g~~i~~~~~vi~~g~~~~~~~~~~~g~~~~~~G~I~v 256 (304)
T 4fk1_A 183 SQ----TIMDELSNKNIPVITES-IRTLQG-EGGYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQLGCELQSNGTFVI 256 (304)
T ss_dssp CH----HHHHHHHTTTCCEECSC-EEEEES-GGGCCCEEEETTSCEECCCEEEECCEEECSSCHHHHTTCCCCTTSSSCS
T ss_pred hh----hhhhhhhccceeEeeee-EEEeec-CCCeeeeeeccccceeeecceeeeeccccCChhhhhcCeEECCCCCEEE
Confidence 22 34567889999999764 777765 456677899999999999999888877666665544 4776 6788999
Q ss_pred ecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHc
Q 018416 158 TGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIM 206 (356)
Q Consensus 158 d~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 206 (356)
|++||||+|+|||+|||+..+. .++..|..||+.||.+|.
T Consensus 257 d~~~~Ts~p~IyA~GDv~~~~~---------~~~~~A~~~G~~AA~~i~ 296 (304)
T 4fk1_A 257 DDFGRTSEKNIYLAGETTTQGP---------SSLIIAASQGNKAAIAIN 296 (304)
T ss_dssp STTCBCSSTTEEECSHHHHTSC---------CCHHHHHHHHHHHHHHHH
T ss_pred CcCCccCCCCEEEEeccCCCcc---------hHHHHHHHHHHHHHHHHH
Confidence 9999999999999999997542 356789999999998774
No 75
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.86 E-value=2.2e-21 Score=208.87 Aligned_cols=180 Identities=22% Similarity=0.314 Sum_probs=139.1
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCC-cEEEEeeCC-ccCCccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcE
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKI-NVTMVFPEA-HCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKV 115 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~-~Vtlv~~~~-~~l~~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v 115 (356)
.+++|+|||||++|+|+|..+.++|. +||++++++ .+++. +++++ +.+++.||++++++.++++.. +++++
T Consensus 331 ~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~-~~~e~-----~~~~~~Gv~~~~~~~~~~i~~-~~g~v 403 (1025)
T 1gte_A 331 IRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRA-VPEEV-----ELAKEEKCEFLPFLSPRKVIV-KGGRI 403 (1025)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCS-CHHHH-----HHHHHTTCEEECSEEEEEEEE-ETTEE
T ss_pred cCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCC-CHHHH-----HHHHHcCCEEEeCCCceEEEc-cCCeE
Confidence 36799999999999999999999997 899999998 45554 56654 456788999999999999976 45666
Q ss_pred EEEEeC------CC---------cEEecCeEEEecCCCCC-chhhhc--cccc-ccCcEEEec-ccccCCCCEEEEcccc
Q 018416 116 VAVNLR------DG---------NRLPTDMVVVGIGIRPN-TSLFEG--QLTL-EKGGIKVTG-RLQSSNSSVYAVGDVA 175 (356)
Q Consensus 116 ~~v~~~------~g---------~~i~~D~vi~a~G~~p~-~~l~~~--~l~~-~~g~I~vd~-~l~ts~~~VyAiGD~~ 175 (356)
..+++. +| +++++|.||+++|++|+ +.++.. ++.. .+|+|.||+ ++||+.|+|||+|||+
T Consensus 404 ~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~ 483 (1025)
T 1gte_A 404 VAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIV 483 (1025)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSCBCTTSSBCCCTTTCBCSSTTEEECSGGG
T ss_pred EEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCceECCCCCEEECCCCCccCCCCEEEeCCCC
Confidence 555542 22 36899999999999864 566654 4666 578899997 8999999999999999
Q ss_pred ccCccccCcccccccHHHHHHHHHHHHHHHcCC------CCCCCCCCCCeEEE--EecCceEEEeec
Q 018416 176 AFPLKLLGETRRLEHVDSARKSAKHAVAAIMEP------DKTDKFDYLPFFYS--RVFTLSWQFYGD 234 (356)
Q Consensus 176 ~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~------~~~~~~~~~p~~~~--~~~~~~~~~~G~ 234 (356)
..+ .++..|+.||+.||.+|.+. .....+..+|++|. ...+++..+.|.
T Consensus 484 ~~~----------~~~~~A~~~G~~aA~~i~~~L~~~~~~~~~~~~~~p~~~~ev~~v~ls~~~~G~ 540 (1025)
T 1gte_A 484 GMA----------NTTVESVNDGKQASWYIHKYIQAQYGASVSAKPELPLFYTPVDLVDISVEMAGL 540 (1025)
T ss_dssp CSC----------CCHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCCBCCCCCGGGGCCCCEEETTE
T ss_pred CCc----------hHHHHHHHHHHHHHHHHHHHHHhccCCCcccCcCccccccccccccceeeeccc
Confidence 754 35678999999999999741 11124567888876 455555565554
No 76
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.86 E-value=7.5e-22 Score=188.49 Aligned_cols=164 Identities=13% Similarity=0.198 Sum_probs=129.4
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc------cCCHHHHHHHHHHHHhCC-CEEEeCCeeeEEEEc
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR------LFTPKIASYYEEYYKSKG-VKFVKGTVLSSFDVD 110 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~------~~d~~~~~~~~~~l~~~G-V~v~~~~~v~~i~~~ 110 (356)
++++++|||+|++|+|+|..|++.|.+||++++.+.++++ .+++...+.+.+.|++.| |++++++++++++.+
T Consensus 165 ~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~ 244 (369)
T 3d1c_A 165 NKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFN 244 (369)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTTSCCHHHHHHHHHHHHTTCCEEEECSCCEEEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcEEEecCcEEEEEEec
Confidence 5789999999999999999999999999999999887742 156778899999999997 999999999999753
Q ss_pred CCCcEEEEEeCCCcEEe-cCeEEEecCCCCCchhhhc-ccccccCcEEEecc-cccCCCCEEEEccccccCccccCcccc
Q 018416 111 SNGKVVAVNLRDGNRLP-TDMVVVGIGIRPNTSLFEG-QLTLEKGGIKVTGR-LQSSNSSVYAVGDVAAFPLKLLGETRR 187 (356)
Q Consensus 111 ~~g~v~~v~~~~g~~i~-~D~vi~a~G~~p~~~l~~~-~l~~~~g~I~vd~~-l~ts~~~VyAiGD~~~~~~~~~g~~~~ 187 (356)
+ +. ..+++.+|+++. +|.+|+++|++|+++++.. .+...+|+|.||++ ++|+.|+|||+|||+..+....
T Consensus 245 ~-~~-~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~~~~~~~~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~~~----- 317 (369)
T 3d1c_A 245 N-GQ-YHISFDSGQSVHTPHEPILATGFDATKNPIVQQLFVTTNQDIKLTTHDESTRYPNIFMIGATVENDNAKL----- 317 (369)
T ss_dssp T-TE-EEEEESSSCCEEESSCCEECCCBCGGGSHHHHHHSCCTTSCCCBCTTSBBSSSTTEEECSTTCCCSSCCC-----
T ss_pred C-Cc-eEEEecCCeEeccCCceEEeeccCCccchhhhhhccCCCCCEEechhhcccCCCCeEEeccccccCCeeE-----
Confidence 3 22 457788898775 6999999999999965544 34445677999985 7789999999999998765422
Q ss_pred cccHHHHHHHHHHHHHHHcCCC
Q 018416 188 LEHVDSARKSAKHAVAAIMEPD 209 (356)
Q Consensus 188 ~~~~~~A~~~g~~aa~~i~g~~ 209 (356)
+.+..+.+||+.+|++|.+..
T Consensus 318 -~~~~~~~~~a~~~a~~l~~~~ 338 (369)
T 3d1c_A 318 -CYIYKFRARFAVLAHLLTQRE 338 (369)
T ss_dssp -CSHHHHGGGHHHHHHHHHHHT
T ss_pred -EEEehhhHHHHHHHHHHhccc
Confidence 345568889999999998754
No 77
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.86 E-value=5.6e-22 Score=192.22 Aligned_cols=195 Identities=18% Similarity=0.129 Sum_probs=152.3
Q ss_pred CCccCCCCCCC----CCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCch-----------HHHHHHHHHHHCC--CcEE
Q 018416 4 KLEEFGLSGSD----AENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGY-----------IGMECAASLVINK--INVT 66 (356)
Q Consensus 4 ~p~~~~ipG~~----~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~-----------iGlE~A~~L~~~G--~~Vt 66 (356)
+|+.+++||.+ ...++++++.+++..+++.+......+.+|+++|. +++|+|..|++.+ .+|+
T Consensus 107 ~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~ 186 (401)
T 3vrd_B 107 DLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVI 186 (401)
T ss_dssp EECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred ccccCCccCchhhcccCccceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEE
Confidence 56778889865 24567889999999999998876555555554332 4567777777665 6899
Q ss_pred EEeeCCccCC-ccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchhhh
Q 018416 67 MVFPEAHCMA-RLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFE 145 (356)
Q Consensus 67 lv~~~~~~l~-~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~ 145 (356)
++++.+.+.. ..+++.+.+.+.+.+++.||+++++++++.++.+.++ ..+++++|+++++|++++++|.+|+..+.+
T Consensus 187 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~--~~v~~~~g~~i~~D~vi~~~g~~~~~~~~~ 264 (401)
T 3vrd_B 187 ILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHPGPDAAVVKTDTEA--MTVETSFGETFKAAVINLIPPQRAGKIAQS 264 (401)
T ss_dssp EECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEECTTTTCEEEEETTT--TEEEETTSCEEECSEEEECCCEEECHHHHH
T ss_pred EEcccccccccccccHHHHHHHHHHHHhcCcEEEeCceEEEEEecccc--eEEEcCCCcEEEeeEEEEecCcCCchhHhh
Confidence 9999887643 2267788888888889999999999999999864444 357889999999999999999999865545
Q ss_pred cccccccCcEEEecc-cc-cCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcC
Q 018416 146 GQLTLEKGGIKVTGR-LQ-SSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 207 (356)
Q Consensus 146 ~~l~~~~g~I~vd~~-l~-ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 207 (356)
..+..++|+|.||++ || |++|||||+|||+.... ..++++.|++||+.+|+||+.
T Consensus 265 ~gl~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~-------~pk~a~~A~~qa~v~A~ni~~ 321 (401)
T 3vrd_B 265 ASLTNDSGWCPVDIRTFESSLQPGIHVIGDACNAAP-------MPKSAYSANSQAKVAAAAVVA 321 (401)
T ss_dssp TTCCCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTT-------SCBSHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCEEECCCcceecCCCCEEEecccccCCC-------CCchHHHHHHHHHHHHHHHHH
Confidence 556668899999987 65 69999999999986421 125688999999999999974
No 78
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.85 E-value=5.1e-22 Score=206.97 Aligned_cols=198 Identities=15% Similarity=0.144 Sum_probs=148.7
Q ss_pred CccCCCCCCC--CCCeEEeCCHHHHHHHHHHHhcCCCCcEEEEC--CchHHHHHHHHHHHCCCcEEEEeeCCccCCc-cC
Q 018416 5 LEEFGLSGSD--AENVCYLRDLADANRLVNVMKSCSGGNAVVIG--GGYIGMECAASLVINKINVTMVFPEAHCMAR-LF 79 (356)
Q Consensus 5 p~~~~ipG~~--~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvG--gG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~-~~ 79 (356)
|+.+++||.+ .+++++. .++.. . ....+++|+||| ||++|+|+|..|+++|.+||++++.+ +++. .+
T Consensus 499 p~~~~ipG~~~~~~~v~~~---~~~l~--~--~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~ 570 (729)
T 1o94_A 499 LTHDPIPGADASLPDQLTP---EQVMD--G--KKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMHF 570 (729)
T ss_dssp TTSSCCTTCCTTSTTEECH---HHHHH--C--CSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHHH
T ss_pred ccCCCCCCccccCCCEEEH---HHHhc--C--CCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccccccc
Confidence 6778999987 6788853 33321 1 122578999999 99999999999999999999999998 6552 13
Q ss_pred CHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCC-cE------------------EecCeEEEecCCCCC
Q 018416 80 TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG-NR------------------LPTDMVVVGIGIRPN 140 (356)
Q Consensus 80 d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g-~~------------------i~~D~vi~a~G~~p~ 140 (356)
+.. ...+.+.|+++||++++++++++++. ++......+.++ ++ +++|.||+++|.+|+
T Consensus 571 ~~~-~~~~~~~l~~~GV~i~~~~~v~~i~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~ 647 (729)
T 1o94_A 571 TLE-YPNMMRRLHELHVEELGDHFCSRIEP--GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSE 647 (729)
T ss_dssp TTC-HHHHHHHHHHTTCEEECSEEEEEEET--TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEEC
T ss_pred ccc-HHHHHHHHHhCCCEEEcCcEEEEEEC--CeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCC
Confidence 333 46678889999999999999999974 331111111233 33 999999999999999
Q ss_pred chhhhcccccccCcEEEecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeE
Q 018416 141 TSLFEGQLTLEKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFF 220 (356)
Q Consensus 141 ~~l~~~~l~~~~g~I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~ 220 (356)
+.+++.. . ..+|++++|+.|+|||+|||+.. ..+..|+.||+.||.+|.+.. .+..+|+
T Consensus 648 ~~l~~~l-~-----~~vd~~~~t~~~~VyAiGD~~~~-----------~~~~~A~~~G~~aA~~i~~~l---~~~~~p~- 706 (729)
T 1o94_A 648 CTLWNEL-K-----ARESEWAENDIKGIYLIGDAEAP-----------RLIADATFTGHRVAREIEEAN---PQIAIPY- 706 (729)
T ss_dssp CHHHHHH-H-----HTGGGTGGGTCCEEEECGGGTSC-----------CCHHHHHHHHHHHHHTTTSSC---TTSCCCC-
T ss_pred hHHHHHH-h-----hhcccccccCCCCeEEEeCccch-----------hhHHHHHHHHHHHHHHhhhhc---ccCCCCe-
Confidence 9987632 1 12688999999999999999863 246789999999999998753 3456777
Q ss_pred EEEecCceEEEeec
Q 018416 221 YSRVFTLSWQFYGD 234 (356)
Q Consensus 221 ~~~~~~~~~~~~G~ 234 (356)
+...+++.++++|.
T Consensus 707 ~~~~~~~~~~~~~~ 720 (729)
T 1o94_A 707 KRETIAWGTPHMPG 720 (729)
T ss_dssp CCCCCCTTCCSSTT
T ss_pred eeecccCcccccCC
Confidence 67778777666553
No 79
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.85 E-value=1.3e-21 Score=209.43 Aligned_cols=176 Identities=16% Similarity=0.193 Sum_probs=142.3
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|+.+++||.+.++|++.+++.+.. +.....++++++|||+|++|+|+|..|++.|.+||++++.+.+++ .
T Consensus 252 ~p~~~~ipG~~~~gv~~~~~~~~~l---~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~-----~- 322 (965)
T 2gag_A 252 HERPIVFENNDRPGIMLAGAVRSYL---NRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA-----A- 322 (965)
T ss_dssp EECCCCCBTCCSTTEEEHHHHHHHH---HTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH-----H-
T ss_pred ccCCCCCCCCCCCCEEEhHHHHHHH---HhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch-----h-
Confidence 4677889999999999766554332 111222568999999999999999999999999999999987643 2
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCC-------C--cEEecCeEEEecCCCCCchhhhcccccccCc
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD-------G--NRLPTDMVVVGIGIRPNTSLFEGQLTLEKGG 154 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~-------g--~~i~~D~vi~a~G~~p~~~l~~~~l~~~~g~ 154 (356)
.+.+++.||++++++.+++++.++++.+..+++.+ | +++++|.|++++|++||++++.. .+++
T Consensus 323 ----~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~----~~g~ 394 (965)
T 2gag_A 323 ----AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQ----RQGK 394 (965)
T ss_dssp ----HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHH----TTCC
T ss_pred ----HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHh----CCCc
Confidence 56688999999999999999863245555666654 5 67999999999999999998753 2578
Q ss_pred EEEecccc-----cCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcC
Q 018416 155 IKVTGRLQ-----SSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 207 (356)
Q Consensus 155 I~vd~~l~-----ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 207 (356)
|.+|++++ |+.|+|||+|||+..+. ...|..||+.||.+|++
T Consensus 395 i~vd~~~~~~v~~ts~p~IyAaGD~a~~~~-----------l~~A~~~G~~aA~~i~~ 441 (965)
T 2gag_A 395 LDWDTTIHAFVPADAVANQHLAGAMTGRLD-----------TASALSTGAATGAAAAT 441 (965)
T ss_dssp EEEETTTTEEEECSCCTTEEECGGGGTCCS-----------HHHHHHHHHHHHHHHHH
T ss_pred EEEcCcccccccCCCCCCEEEEEecCCchh-----------HHHHHHHHHHHHHHHHH
Confidence 99999887 89999999999997642 34799999999999975
No 80
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.85 E-value=1.1e-22 Score=199.46 Aligned_cols=197 Identities=15% Similarity=0.128 Sum_probs=142.7
Q ss_pred CCCCCCCCCCeEEeCCHHHHHHHHHHHhcC-CCCcEEEECCch------HHHHH----HHHHHHCC----CcEEEEeeCC
Q 018416 8 FGLSGSDAENVCYLRDLADANRLVNVMKSC-SGGNAVVIGGGY------IGMEC----AASLVINK----INVTMVFPEA 72 (356)
Q Consensus 8 ~~ipG~~~~~v~~l~~~~da~~i~~~l~~~-~~~~vvVvGgG~------iGlE~----A~~L~~~G----~~Vtlv~~~~ 72 (356)
+++||.+ ++++++++++|+.++++.+.+. ..+.++|+|++. .+.|+ +..+.++| .+|++++..+
T Consensus 111 ~~i~G~~-e~~~~~~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~ 189 (430)
T 3hyw_A 111 FGAEGQE-ENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEP 189 (430)
T ss_dssp CCSBTHH-HHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSS
T ss_pred CCccCcc-cCcCCcccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccc
Confidence 5788875 6788999999999998877643 234455555542 23343 34455555 4789998887
Q ss_pred ccCC--ccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCC--cEEecCeEEEecCCCCCchhhhccc
Q 018416 73 HCMA--RLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG--NRLPTDMVVVGIGIRPNTSLFEGQL 148 (356)
Q Consensus 73 ~~l~--~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g--~~i~~D~vi~a~G~~p~~~l~~~~l 148 (356)
.+.+ ...++...+.+++.|+++||++++++.|++++. +.+ .++..+| +++++|++++++|++|+..+.....
T Consensus 190 ~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~---~~~-~~~~~~g~~~~i~~d~vi~~~G~~~~~~~~~~~~ 265 (430)
T 3hyw_A 190 YLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEP---DKV-IYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGD 265 (430)
T ss_dssp STTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEECS---SEE-EEECTTSCEEEEECSEEEEECEEECCHHHHTTCT
T ss_pred hhhhccchhhHHHHHHHHHHHHhCCeEEEeCceEEEEeC---Cce-EEEeeCCCceEeecceEEEeccCCCchHHHhccc
Confidence 6532 225677888999999999999999999999953 222 2343343 5799999999999999866655543
Q ss_pred c--c-ccCcEEEecccc-cCCCCEEEEccccccCccccCc--ccccccHHHHHHHHHHHHHHHcCCC
Q 018416 149 T--L-EKGGIKVTGRLQ-SSNSSVYAVGDVAAFPLKLLGE--TRRLEHVDSARKSAKHAVAAIMEPD 209 (356)
Q Consensus 149 ~--~-~~g~I~vd~~l~-ts~~~VyAiGD~~~~~~~~~g~--~~~~~~~~~A~~~g~~aa~~i~g~~ 209 (356)
. . .+|.|.||++|| |++|||||+|||+..+...... ....+.++.|++||+.+|+||+...
T Consensus 266 ~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l 332 (430)
T 3hyw_A 266 KVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDI 332 (430)
T ss_dssp TTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCceEEEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHh
Confidence 3 3 346799999999 7999999999999877532111 1124678899999999999998543
No 81
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.84 E-value=2.2e-21 Score=191.75 Aligned_cols=189 Identities=22% Similarity=0.274 Sum_probs=137.4
Q ss_pred CccCCCCCCCCCCeEEeCCHHHHHH-HH---HHHhcCCCCcEEEECCchHHHHHHHHHHHC-------------------
Q 018416 5 LEEFGLSGSDAENVCYLRDLADANR-LV---NVMKSCSGGNAVVIGGGYIGMECAASLVIN------------------- 61 (356)
Q Consensus 5 p~~~~ipG~~~~~v~~l~~~~da~~-i~---~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~------------------- 61 (356)
|+.+++||.+.+++++.+++....+ .. ..+....+++++|||+|++|+|+|..|++.
T Consensus 109 ~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~ 188 (456)
T 1lqt_A 109 DRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRP 188 (456)
T ss_dssp ECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTT
T ss_pred CCCCCCCCCCCCCcEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHH
Confidence 6778999998889987654421100 00 011112578999999999999999999974
Q ss_pred -C-CcEEEEeeCCccCCccCCH-------------------HH------------------HHHHHHHHHh------CCC
Q 018416 62 -K-INVTMVFPEAHCMARLFTP-------------------KI------------------ASYYEEYYKS------KGV 96 (356)
Q Consensus 62 -G-~~Vtlv~~~~~~l~~~~d~-------------------~~------------------~~~~~~~l~~------~GV 96 (356)
| .+|++++|++.+... |++ ++ .+.+.+.+++ +||
T Consensus 189 ~g~~~V~lv~r~~~~~~~-f~~~elrel~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv 267 (456)
T 1lqt_A 189 RGIQEVVIVGRRGPLQAA-FTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRM 267 (456)
T ss_dssp CCCCEEEEECSSCGGGCC-CCHHHHHHGGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEE
T ss_pred CCCcEEEEEecCChhhhc-cChHHHHHhhcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceE
Confidence 5 499999999876554 221 11 2444555555 799
Q ss_pred EEEeCCeeeEEEEcCCCcEEEEEeC----------------CC--cEEecCeEEEecCCCCCchhhhccccc-ccCcEEE
Q 018416 97 KFVKGTVLSSFDVDSNGKVVAVNLR----------------DG--NRLPTDMVVVGIGIRPNTSLFEGQLTL-EKGGIKV 157 (356)
Q Consensus 97 ~v~~~~~v~~i~~~~~g~v~~v~~~----------------~g--~~i~~D~vi~a~G~~p~~~l~~~~l~~-~~g~I~v 157 (356)
+++++++++++.. ++.+..+++. +| ++++||+|++++|++|++ + .++.+ ++++|.+
T Consensus 268 ~i~~~~~~~~i~~--~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~-l--~gl~~d~~g~i~v 342 (456)
T 1lqt_A 268 VFRFLTSPIEIKG--KRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP-T--PGLPFDDQSGTIP 342 (456)
T ss_dssp EEECSEEEEEEEC--SSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCC-C--TTSCCBTTTTBCC
T ss_pred EEEeCCCCeEEec--CCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCC-C--CCCcccCCCCeeE
Confidence 9999999999985 3443334442 34 469999999999999998 3 34555 5688999
Q ss_pred ecccc-cCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCC
Q 018416 158 TGRLQ-SSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEP 208 (356)
Q Consensus 158 d~~l~-ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 208 (356)
|+++| |+.|+|||+|||+..+.. .+..|+.||+.+|.+|++.
T Consensus 343 n~~~rvt~~pgvya~GD~~~gp~~---------~i~~a~~~g~~~a~~i~~~ 385 (456)
T 1lqt_A 343 NVGGRINGSPNEYVVGWIKRGPTG---------VIGTNKKDAQDTVDTLIKN 385 (456)
T ss_dssp EETTEETTCSSEEECTHHHHCSCS---------CTTHHHHHHHHHHHHHHHH
T ss_pred CCCCcCCCCCCEEEEeccCCCCch---------hHHHHHHHHHHHHHHHHHH
Confidence 99999 799999999999975432 3446889999999998753
No 82
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.83 E-value=3.9e-21 Score=181.83 Aligned_cols=182 Identities=19% Similarity=0.233 Sum_probs=128.1
Q ss_pred CCccCCCCCCCCC--CeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeC-CccCCccC-
Q 018416 4 KLEEFGLSGSDAE--NVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPE-AHCMARLF- 79 (356)
Q Consensus 4 ~p~~~~ipG~~~~--~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~-~~~l~~~~- 79 (356)
+|+.+++||.+.. .++......+.. ...+++++|||+|++|+|+|..|++.| +||++.++ +.+++..+
T Consensus 133 ~~~~~~~~g~~~~~~~~~~~~~~~~~~-------~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~ 204 (357)
T 4a9w_A 133 EAYTPEYQGLESFAGIQLHSAHYSTPA-------PFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVD 204 (357)
T ss_dssp GBCCCCCTTGGGCCSEEEEGGGCCCSG-------GGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCC
T ss_pred CCCCCCCCCccccCCcEEEeccCCChh-------hcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhc
Confidence 4666788886532 122222221211 125799999999999999999999998 69999988 56666432
Q ss_pred CHHHHHHHHHHHH----------------------------hCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeE
Q 018416 80 TPKIASYYEEYYK----------------------------SKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMV 131 (356)
Q Consensus 80 d~~~~~~~~~~l~----------------------------~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~v 131 (356)
+.++.+.+.+.+. +.|+ +..+..+++++. + .+.+.+|+++++|.|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~--~----~v~~~~g~~i~~D~v 277 (357)
T 4a9w_A 205 GRVLFERATERWKAQQEGREPDLPPGGFGDIVMVPPVLDARARGV-LAAVPPPARFSP--T----GMQWADGTERAFDAV 277 (357)
T ss_dssp THHHHTC----------------------CBCCCHHHHHHHHTTC-CCEECCCSEEET--T----EEECTTSCEEECSEE
T ss_pred CccHHHHHHHHHhccccccCCCcccccccCcccChhHHHHHhcCc-eEEecCcceEeC--C----eeEECCCCEecCCEE
Confidence 3444444333332 3454 555667777753 1 477899999999999
Q ss_pred EEecCCCCCchhhhcc-cccccCcEEEecc--cccCCCCEEEEc--cccccCccccCcccccccHHHHHHHHHHHHHHHc
Q 018416 132 VVGIGIRPNTSLFEGQ-LTLEKGGIKVTGR--LQSSNSSVYAVG--DVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIM 206 (356)
Q Consensus 132 i~a~G~~p~~~l~~~~-l~~~~g~I~vd~~--l~ts~~~VyAiG--D~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 206 (356)
++++|++|++++++.. +..++|+|.||++ ++|+.|+|||+| ||+.... ..+..|..||+.+|.+|.
T Consensus 278 i~a~G~~p~~~~l~~~gl~~~~G~i~vd~~~l~~t~~~~vya~Gd~d~~~~~~---------~~~~~A~~~g~~~a~~i~ 348 (357)
T 4a9w_A 278 IWCTGFRPALSHLKGLDLVTPQGQVEVDGSGLRALAVPSVWLLGYGDWNGMAS---------ATLIGVTRYAREAVRQVT 348 (357)
T ss_dssp EECCCBCCCCGGGTTTTCBCTTSCBCBCTTSCBBSSCTTEEECSSCGGGSTTC---------SSTTTHHHHHHHHHHHHH
T ss_pred EECCCcCCCCcccCcccccCCCCCccccCCcccCCCCCCeEEeccccccccch---------hhhhhhHHHHHHHHHHHH
Confidence 9999999999988764 5557789999999 999999999999 5554221 234468899999999987
Q ss_pred CCC
Q 018416 207 EPD 209 (356)
Q Consensus 207 g~~ 209 (356)
...
T Consensus 349 ~~l 351 (357)
T 4a9w_A 349 AYC 351 (357)
T ss_dssp HHT
T ss_pred HHH
Confidence 543
No 83
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.81 E-value=1.2e-19 Score=177.83 Aligned_cols=185 Identities=13% Similarity=0.113 Sum_probs=138.5
Q ss_pred eEEeCCHHHHHHHHHHHhcC-CCCcEEEECCchH----H--HHHH----HHHHHCC----CcEEEEeeCCccCCccC--C
Q 018416 18 VCYLRDLADANRLVNVMKSC-SGGNAVVIGGGYI----G--MECA----ASLVINK----INVTMVFPEAHCMARLF--T 80 (356)
Q Consensus 18 v~~l~~~~da~~i~~~l~~~-~~~~vvVvGgG~i----G--lE~A----~~L~~~G----~~Vtlv~~~~~~l~~~~--d 80 (356)
.+.+.+.+++.++.+.++.. ++++++|||+|+. | +|+| ..|.++| .+|+++++.+.+....+ .
T Consensus 120 ~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~ 199 (430)
T 3h28_A 120 STSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGI 199 (430)
T ss_dssp SCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCS
T ss_pred ccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCccccccccCcc
Confidence 35567888888877655432 2456788888654 3 8877 5556677 48999999987732111 2
Q ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCC----CcEEecCeEEEecCCCCCchhhhc--ccccccC-
Q 018416 81 PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD----GNRLPTDMVVVGIGIRPNTSLFEG--QLTLEKG- 153 (356)
Q Consensus 81 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~----g~~i~~D~vi~a~G~~p~~~l~~~--~l~~~~g- 153 (356)
++..+.+++.|+++||+++++++|++++. ++ +.+++ ++++++|.+++++|++|+..+.+. ++..++|
T Consensus 200 ~~~~~~l~~~l~~~GV~i~~~~~v~~v~~--~~----v~~~~~~~~g~~i~~D~vv~a~G~~~~~~l~~~~~gl~~~~G~ 273 (430)
T 3h28_A 200 GASKRLVEDLFAERNIDWIANVAVKAIEP--DK----VIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANK 273 (430)
T ss_dssp TTHHHHHHHHHHHTTCEEECSCEEEEECS--SE----EEEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTTBCTTTC
T ss_pred hHHHHHHHHHHHHCCCEEEeCCEEEEEeC--Ce----EEEEecCCCceEEeeeEEEECCCCccchhHhhccccCcCCCCC
Confidence 45788899999999999999999999964 22 33444 678999999999999998776653 4544678
Q ss_pred cEEEeccccc-CCCCEEEEccccccCccccCccc---ccccHHHHHHHHHHHHHHHcCCC
Q 018416 154 GIKVTGRLQS-SNSSVYAVGDVAAFPLKLLGETR---RLEHVDSARKSAKHAVAAIMEPD 209 (356)
Q Consensus 154 ~I~vd~~l~t-s~~~VyAiGD~~~~~~~~~g~~~---~~~~~~~A~~~g~~aa~~i~g~~ 209 (356)
+|.||+++|| ++|+|||+|||+..+.. .+.+. ...++..|..||+.+|+||....
T Consensus 274 ~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~-~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l 332 (430)
T 3h28_A 274 MVIVNRCFQNPTYKNIFGVGVVTAIPPI-EKTPIPTGVPKTGMMIEQMAMAVAHNIVNDI 332 (430)
T ss_dssp CBCCCTTSBCSSSTTEEECSTTBCCCCS-SCCSSCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCccccCCCCCCEEEEEeeeccCCc-cCCCCCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence 8999999999 99999999999987642 12111 23578899999999999997543
No 84
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.81 E-value=8.9e-20 Score=189.03 Aligned_cols=174 Identities=20% Similarity=0.151 Sum_probs=136.8
Q ss_pred CccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEEC--CchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHH
Q 018416 5 LEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIG--GGYIGMECAASLVINKINVTMVFPEAHCMARLFTPK 82 (356)
Q Consensus 5 p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvG--gG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~ 82 (356)
|..+++||.+.+++++. .+... . ....+++++||| +|++|+|+|..|++.|.+||++++.+.+++...++.
T Consensus 496 ~~~~~i~G~~~~~v~~~---~~~l~---~-~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~ 568 (690)
T 3k30_A 496 FHTTALPIAEGMQVLGP---DDLFA---G-RLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTF 568 (690)
T ss_dssp SCSSCCCBCTTSEEECH---HHHHT---T-CCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGGGT
T ss_pred cCCCCCCCCCCCcEEcH---HHHhC---C-CCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccccch
Confidence 66788999887777643 23221 1 122567899999 999999999999999999999999999887644566
Q ss_pred HHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEE---eCCCcEEecCeEEEecCCCCCchhhhcccccccCcEEEec
Q 018416 83 IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVN---LRDGNRLPTDMVVVGIGIRPNTSLFEGQLTLEKGGIKVTG 159 (356)
Q Consensus 83 ~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~---~~~g~~i~~D~vi~a~G~~p~~~l~~~~l~~~~g~I~vd~ 159 (356)
....+.+.|+++||+++++++|++++. ++ ..+. ..+++++++|.||+++|++|++.++..... .+.
T Consensus 569 ~~~~l~~~l~~~GV~i~~~~~V~~i~~--~~--~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l~~~l~~--~~~----- 637 (690)
T 3k30_A 569 EVNRIQRRLIENGVARVTDHAVVAVGA--GG--VTVRDTYASIERELECDAVVMVTARLPREELYLDLVA--RRD----- 637 (690)
T ss_dssp CHHHHHHHHHHTTCEEEESEEEEEEET--TE--EEEEETTTCCEEEEECSEEEEESCEEECCHHHHHHHH--HHH-----
T ss_pred hHHHHHHHHHHCCCEEEcCcEEEEEEC--Ce--EEEEEccCCeEEEEECCEEEECCCCCCChHHHHHHhh--hhc-----
Confidence 788889999999999999999999974 33 1232 235568999999999999999998764211 111
Q ss_pred ccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCC
Q 018416 160 RLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPD 209 (356)
Q Consensus 160 ~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 209 (356)
+|+.|+|||+|||+... .+..|+.||+.||.+|.+..
T Consensus 638 --~t~~~~VyaiGD~~~~~-----------~~~~A~~~g~~aa~~i~~~l 674 (690)
T 3k30_A 638 --AGEIASVRGIGDAWAPG-----------TIAAAVWSGRRAAEEFDAVL 674 (690)
T ss_dssp --HTSCSEEEECGGGTSCB-----------CHHHHHHHHHHHHHHTTCCC
T ss_pred --ccCCCCEEEEeCCCchh-----------hHHHHHHHHHHHHHHHHhhc
Confidence 78999999999999753 45679999999999998864
No 85
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.79 E-value=3.7e-19 Score=176.19 Aligned_cols=166 Identities=12% Similarity=0.088 Sum_probs=127.9
Q ss_pred CCccCCCCCCCC-CC-eEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCH
Q 018416 4 KLEEFGLSGSDA-EN-VCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTP 81 (356)
Q Consensus 4 ~p~~~~ipG~~~-~~-v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~ 81 (356)
+|+.+++||.+. ++ +++..++.+.. ...+|+|+|||+|++|+|+|..|++.|.+||++++++.+++..++
T Consensus 167 ~p~~p~ipG~~~~~g~~~hs~~~~~~~-------~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~~~~~- 238 (464)
T 2xve_A 167 TPYVPEFEGFEKFGGRILHAHDFRDAL-------EFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMGYKWP- 238 (464)
T ss_dssp SBCCCCCBTTTTCCSEEEEGGGCCCGG-------GGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCCCCCC-
T ss_pred CCccCCCCCcccCCceEEehhhhCCHh-------HcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCCCCCC-
Confidence 688888999763 33 44433322221 125899999999999999999999999999999999888764332
Q ss_pred HHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchhhhcc--cccccC-cEEEe
Q 018416 82 KIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ--LTLEKG-GIKVT 158 (356)
Q Consensus 82 ~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~--l~~~~g-~I~vd 158 (356)
.||+++ ..|+++++ + .+.+.||+++++|.||+|+|++|+++++... +..+++ .+ +|
T Consensus 239 ------------~~V~~~--~~V~~i~~---~---~V~~~dG~~i~~D~Vi~atG~~p~~~~l~~~~gl~~~~~~~v-~~ 297 (464)
T 2xve_A 239 ------------ENWDER--PNLVRVDT---E---NAYFADGSSEKVDAIILCTGYIHHFPFLNDDLRLVTNNRLWP-LN 297 (464)
T ss_dssp ------------TTEEEC--SCEEEECS---S---EEEETTSCEEECSEEEECCCBCCCCTTBCTTTCCCCCSSSCC-SS
T ss_pred ------------CceEEc--CCeEEEeC---C---EEEECCCCEEeCCEEEECCCCCCCCCCcCcccccccCCCccc-cc
Confidence 588887 67888852 2 4778999999999999999999999987652 444444 55 44
Q ss_pred cc---cccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCC
Q 018416 159 GR---LQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPD 209 (356)
Q Consensus 159 ~~---l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 209 (356)
.+ ++|+.|+|||+|||... ..+..|..||+.++.+|.|..
T Consensus 298 ~~~~~~~t~~p~i~aiGd~~~~-----------~~~~~a~~qa~~~a~~l~G~~ 340 (464)
T 2xve_A 298 LYKGVVWEDNPKFFYIGMQDQW-----------YSFNMFDAQAWYARDVIMGRL 340 (464)
T ss_dssp EETTTEESSSTTEEECSCSCCS-----------SCHHHHHHHHHHHHHHHTTSS
T ss_pred ccceEecCCCCCEEEEeCcccc-----------cchHHHHHHHHHHHHHHcCCC
Confidence 43 67899999999998863 246678899999999998754
No 86
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.77 E-value=1.9e-18 Score=172.32 Aligned_cols=153 Identities=16% Similarity=0.122 Sum_probs=123.9
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 83 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~ 83 (356)
+|+.+++||.+.+++++.+ ++..+.+.....++++++|||+|++|+|
T Consensus 218 ~~~~~~~~g~~~~gv~~~~---~~~~~~~~~~~~~~~~vvViGgG~~gle------------------------------ 264 (493)
T 1y56_A 218 IDSTMLFENNDMPGVFRRD---FALEVMNVWEVAPGRKVAVTGSKADEVI------------------------------ 264 (493)
T ss_dssp EECCCCCTTTTSTTEEEHH---HHHHHHHTSCBCSCSEEEEESTTHHHHH------------------------------
T ss_pred CccCCCCCCCCCCCEEEcH---HHHHHHHhcccCCCCEEEEECCCHHHHH------------------------------
Confidence 4667789999999998754 4444444333346799999999999998
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchhhhcc-ccc---ccCcEE-Ee
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTL---EKGGIK-VT 158 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-l~~---~~g~I~-vd 158 (356)
+.++++||++++++.+++++. ++.+..+.+.+|+++++|.|++++|.+|++++++.. +.. ++|+|. ||
T Consensus 265 -----~~l~~~GV~v~~~~~v~~i~~--~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~~~~~~~g~i~~vd 337 (493)
T 1y56_A 265 -----QELERWGIDYVHIPNVKRVEG--NEKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGGKLRFRRGYYSPVLD 337 (493)
T ss_dssp -----HHHHHHTCEEEECSSEEEEEC--SSSCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTCCEEEETTEEEECCC
T ss_pred -----HHHHhCCcEEEeCCeeEEEec--CCceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCCccccCCceeeccc
Confidence 456788999999999999985 334556778889999999999999999999987654 433 366777 89
Q ss_pred cccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCC
Q 018416 159 GRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEP 208 (356)
Q Consensus 159 ~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 208 (356)
++++ +.|+|||+|||+.. .++..|..||+.||.+|.+.
T Consensus 338 ~~~~-s~~~vya~GD~~~~-----------~~~~~A~~~g~~aa~~i~~~ 375 (493)
T 1y56_A 338 EYHR-IKDGIYVAGSAVSI-----------KPHYANYLEGKLVGAYILKE 375 (493)
T ss_dssp TTSE-EETTEEECSTTTCC-----------CCHHHHHHHHHHHHHHHHHH
T ss_pred cccC-cCCCEEEEeccCCc-----------cCHHHHHHHHHHHHHHHHHH
Confidence 9999 99999999999974 35778999999999999864
No 87
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.77 E-value=9.7e-19 Score=180.72 Aligned_cols=167 Identities=23% Similarity=0.250 Sum_probs=131.5
Q ss_pred CCccCCCCCCCCCCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCC--------------------
Q 018416 4 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKI-------------------- 63 (356)
Q Consensus 4 ~p~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~-------------------- 63 (356)
+|+.+++||.+.+++++.. +. +.. ....+++|+|||||++|+|+|..|++.|.
T Consensus 466 ~p~~~~i~G~~~~~v~~~~---~~--l~~--~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~ 538 (671)
T 1ps9_A 466 VPRTPPIDGIDHPKVLSYL---DV--LRD--KAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQ 538 (671)
T ss_dssp EECCCCCBTTTSTTEEEHH---HH--HTS--CCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCC
T ss_pred CcCCCCCCCCCCCcEeeHH---HH--hhC--CCCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhccccccc
Confidence 5788899998877888642 22 111 11257999999999999999999998873
Q ss_pred -----------------cEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCC--c
Q 018416 64 -----------------NVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG--N 124 (356)
Q Consensus 64 -----------------~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g--~ 124 (356)
+|+++++.+..+...+++.....+.+.|+++||++++++++++++. ++ + .++ .+| +
T Consensus 539 ~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~--~~-v-~~~-~~G~~~ 613 (671)
T 1ps9_A 539 QAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDD--DG-L-HVV-INGETQ 613 (671)
T ss_dssp SGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEET--TE-E-EEE-ETTEEE
T ss_pred ccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEeC--Ce-E-EEe-cCCeEE
Confidence 5677888777776667888888889999999999999999999973 33 2 232 567 5
Q ss_pred EEecCeEEEecCCCCCchhhhcccccccCcEEEecccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHH
Q 018416 125 RLPTDMVVVGIGIRPNTSLFEGQLTLEKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAA 204 (356)
Q Consensus 125 ~i~~D~vi~a~G~~p~~~l~~~~l~~~~g~I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~ 204 (356)
++++|.||+++|++||+++++. +++..++||++|||+.... ..+..|++||+.+|.+
T Consensus 614 ~i~~D~Vi~a~G~~p~~~l~~~--------------l~~~g~~v~aiGD~~~~~~---------~~~~~A~~~g~~aA~~ 670 (671)
T 1ps9_A 614 VLAVDNVVICAGQEPNRALAQP--------------LIDSGKTVHLIGGCDVAME---------LDARRAIAQGTRLALE 670 (671)
T ss_dssp EECCSEEEECCCEEECCTTHHH--------------HHTTTCCEEECGGGTCCSS---------CCHHHHHHHHHHHHHH
T ss_pred EEeCCEEEECCCccccHHHHHH--------------HHhcCCCEEEECCcCccCc---------hhHHHHHHHHHHHHHh
Confidence 7999999999999999988753 2334578999999998643 2478999999999988
Q ss_pred H
Q 018416 205 I 205 (356)
Q Consensus 205 i 205 (356)
|
T Consensus 671 i 671 (671)
T 1ps9_A 671 I 671 (671)
T ss_dssp C
T ss_pred C
Confidence 5
No 88
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.74 E-value=1.8e-17 Score=149.07 Aligned_cols=154 Identities=14% Similarity=0.176 Sum_probs=112.2
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc-----------------cCCccCC-------HHHHHHHHHHHHhC-
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH-----------------CMARLFT-------PKIASYYEEYYKSK- 94 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~-----------------~l~~~~d-------~~~~~~~~~~l~~~- 94 (356)
.+|+|||||++|+++|..|+++|.+|+++++... ++.. ++ .++.+.+.+.+++.
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~-~~d~~g~~~~~~~~~l~~~~~~~~ 82 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLER-AYDPKDERVWAFHARAKYLLEGLR 82 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHH-HCCTTCCCHHHHHHHHHHHHHTCT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhh-hccCCCCCHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999999999721 1111 11 36777888889887
Q ss_pred CCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCc--------------------hhhh----ccccc
Q 018416 95 GVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT--------------------SLFE----GQLTL 150 (356)
Q Consensus 95 GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~--------------------~l~~----~~l~~ 150 (356)
|++++ +++++++.. +++.+..+.+.+|+++++|.||+|+|..++. .+.+ ..+..
T Consensus 83 gv~i~-~~~v~~i~~-~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~g~~~ 160 (232)
T 2cul_A 83 PLHLF-QATATGLLL-EGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRLGFRF 160 (232)
T ss_dssp TEEEE-ECCEEEEEE-ETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHTTCCE
T ss_pred CcEEE-EeEEEEEEE-eCCEEEEEEECCCCEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHHhCCCeE
Confidence 99999 568999986 3556667888889899999999999984442 2322 11211
Q ss_pred ccCc----------------EEEe-------cccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcC
Q 018416 151 EKGG----------------IKVT-------GRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 207 (356)
Q Consensus 151 ~~g~----------------I~vd-------~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 207 (356)
.++. ..+. ...+|++|+|||+|||+ .. .....|+.||+.+|.+|..
T Consensus 161 ~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~----------g~~~~~~~~g~~~a~~i~~ 229 (232)
T 2cul_A 161 VEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-RE----------GDYARMSEEGKRLAEHLLH 229 (232)
T ss_dssp EEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SC----------CCHHHHHHHHHHHHHHHHH
T ss_pred EccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cC----------ccHHHHHHHHHHHHHHHHh
Confidence 1100 0011 01237999999999999 53 2567889999999999864
No 89
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.73 E-value=8.2e-18 Score=165.89 Aligned_cols=160 Identities=16% Similarity=0.130 Sum_probs=113.2
Q ss_pred CCCcEEEECCchHHHHHHHHHHHC--CCcEEEEeeCCccCCcc-------------------CCHHHHHHHHHHHHh---
Q 018416 38 SGGNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCMARL-------------------FTPKIASYYEEYYKS--- 93 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~--G~~Vtlv~~~~~~l~~~-------------------~d~~~~~~~~~~l~~--- 93 (356)
++++|+|||+|.+|+|+|..|++. +.+||+++|++.+++.. ++++....+.+.+..
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~ 305 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNY 305 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTS
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCC
Confidence 478999999999999999999999 99999999999876521 223333333333222
Q ss_pred -----------------------CCCEEEeCCeeeEEEEcCCCcEEEEEeC---CCcE--EecCeEEEecCCCCC--chh
Q 018416 94 -----------------------KGVKFVKGTVLSSFDVDSNGKVVAVNLR---DGNR--LPTDMVVVGIGIRPN--TSL 143 (356)
Q Consensus 94 -----------------------~GV~v~~~~~v~~i~~~~~g~v~~v~~~---~g~~--i~~D~vi~a~G~~p~--~~l 143 (356)
.||++++++.|++++.++++ ..+.+. +|+. +++|.||+|+|.+|+ +.+
T Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~--~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~ 383 (463)
T 3s5w_A 306 SVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQG--IELALRDAGSGELSVETYDAVILATGYERQLHRQL 383 (463)
T ss_dssp SCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTE--EEEEEEETTTCCEEEEEESEEEECCCEECCC-CTT
T ss_pred CcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCE--EEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccch
Confidence 69999999999999874333 345554 6654 999999999999999 555
Q ss_pred hhcccccccCcEEEecccccC-----CCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHH
Q 018416 144 FEGQLTLEKGGIKVTGRLQSS-----NSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAI 205 (356)
Q Consensus 144 ~~~~l~~~~g~I~vd~~l~ts-----~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i 205 (356)
+....... |+|.||+++++. .|+|||+|||....... .+ .....|.++++++...+
T Consensus 384 l~~l~~~~-g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~g~~--~~---~l~~~a~r~~~i~~~~~ 444 (463)
T 3s5w_A 384 LEPLAEYL-GDHEIGRDYRLQTDERCKVAIYAQGFSQASHGLS--DT---LLSVLPVRAEEISGSLY 444 (463)
T ss_dssp TGGGGGGB-C--CCCTTSBCCBCTTBCSEEEESSCCHHHHCTT--TT---SSTTHHHHHHHHHHHHH
T ss_pred hHHHHHHh-CCcccCcccccccCCCCCCeEEEcCCCcccCCcC--cc---chhHHHHHHHHHHHHHH
Confidence 54321112 899999999974 46799999998754321 11 23446778888776654
No 90
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.71 E-value=1.1e-17 Score=164.67 Aligned_cols=166 Identities=12% Similarity=0.094 Sum_probs=125.2
Q ss_pred CCccCCCCCCCC------CCeEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCc-EEEEeeCCccCC
Q 018416 4 KLEEFGLSGSDA------ENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKIN-VTMVFPEAHCMA 76 (356)
Q Consensus 4 ~p~~~~ipG~~~------~~v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~-Vtlv~~~~~~l~ 76 (356)
+|+.+++||.+. ..+++.+++.+... ..+++|+|||+|++|+|+|..|++.|.+ ||++++++.+
T Consensus 178 ~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~-------~~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~-- 248 (447)
T 2gv8_A 178 VPYIPNIKGLDEYAKAVPGSVLHSSLFREPEL-------FVGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD-- 248 (447)
T ss_dssp SBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGG-------GTTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS--
T ss_pred CCCCCCCCChhhhhccCCccEEEecccCChhh-------cCCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc--
Confidence 577778888642 23665554433322 1589999999999999999999999999 9999998765
Q ss_pred ccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcE-EecCeEEEecCCCCCchh-----hhcc-cc
Q 018416 77 RLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNR-LPTDMVVVGIGIRPNTSL-----FEGQ-LT 149 (356)
Q Consensus 77 ~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~-i~~D~vi~a~G~~p~~~l-----~~~~-l~ 149 (356)
+++.||++ ...|++++. +++ .|.+.||+. +++|.||+|+|++|++++ ++.. ..
T Consensus 249 --------------l~~~~i~~--~~~v~~~~~-~~~---~v~~~dG~~~~~~D~vi~atG~~~~~~~l~~~~l~~~~~~ 308 (447)
T 2gv8_A 249 --------------IQNESLQQ--VPEITKFDP-TTR---EIYLKGGKVLSNIDRVIYCTGYLYSVPFPSLAKLKSPETK 308 (447)
T ss_dssp --------------CBCSSEEE--ECCEEEEET-TTT---EEEETTTEEECCCSEEEECCCBCCCCCCHHHHSCCSTTTC
T ss_pred --------------CCCCCeEE--ecCeEEEec-CCC---EEEECCCCEeccCCEEEECCCCCcCCCCCcccccccccCc
Confidence 34567774 467888864 222 577889976 799999999999999988 5542 11
Q ss_pred c-ccCcEEEecccc---cCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCC
Q 018416 150 L-EKGGIKVTGRLQ---SSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPD 209 (356)
Q Consensus 150 ~-~~g~I~vd~~l~---ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 209 (356)
. .++.+.+|.+.+ +++|++|++||+.... .+..|..||+.+|.+|.|..
T Consensus 309 i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~~~-----------~~~~a~~qa~~~a~~~~g~~ 361 (447)
T 2gv8_A 309 LIDDGSHVHNVYQHIFYIPDPTLAFVGLALHVV-----------PFPTSQAQAAFLARVWSGRL 361 (447)
T ss_dssp CCSSSSSCCSEETTTEETTCTTEEESSCCBSSC-----------HHHHHHHHHHHHHHHHTTSS
T ss_pred eecCCCcccccccccccCCCCcEEEEecccccc-----------CchHHHHHHHHHHHHHcCCC
Confidence 1 345566666665 6899999999997642 46678999999999998754
No 91
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.53 E-value=1e-14 Score=146.93 Aligned_cols=179 Identities=17% Similarity=0.234 Sum_probs=118.4
Q ss_pred CCccCCCCCCCC-CC-eEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCcc-CCc---
Q 018416 4 KLEEFGLSGSDA-EN-VCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHC-MAR--- 77 (356)
Q Consensus 4 ~p~~~~ipG~~~-~~-v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~-l~~--- 77 (356)
+|+.+++||.+. .+ ++......+. ....+|+|+|||+|.+|+|+|..|++.+.+||+++|.+++ ++.
T Consensus 148 ~p~~p~ipG~~~f~g~~~~~~~~~~~-------~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~ 220 (540)
T 3gwf_A 148 AINFPNLPGLDTFEGETIHTAAWPEG-------KSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNR 220 (540)
T ss_dssp SBCCCCCTTGGGCCSEEEEGGGCCSS-------CCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCC
T ss_pred cCCCCCCCCccccCCCEEEeecCCCc-------cccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccC
Confidence 678889999762 22 2322211111 1136899999999999999999999999999999999983 332
Q ss_pred cCCHHHHHHHHH--------------------------------------------------------------------
Q 018416 78 LFTPKIASYYEE-------------------------------------------------------------------- 89 (356)
Q Consensus 78 ~~d~~~~~~~~~-------------------------------------------------------------------- 89 (356)
.+++...+.+++
T Consensus 221 ~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 300 (540)
T 3gwf_A 221 PVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAA 300 (540)
T ss_dssp BCCHHHHHHHHHTHHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHH
T ss_pred CCCHHHHHHHHhccHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHH
Confidence 122222222210
Q ss_pred -----H---------------------------------HHhCCCEEEe--CCeeeEEEEcCCCcEEEEEeCCCcEEecC
Q 018416 90 -----Y---------------------------------YKSKGVKFVK--GTVLSSFDVDSNGKVVAVNLRDGNRLPTD 129 (356)
Q Consensus 90 -----~---------------------------------l~~~GV~v~~--~~~v~~i~~~~~g~v~~v~~~~g~~i~~D 129 (356)
. |.+.+|+++. +..|+++++ + .|.++||+++++|
T Consensus 301 ~~~~~~~~~~v~dp~~~~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~--~----gv~~~dG~~~~~D 374 (540)
T 3gwf_A 301 SFIRAKVAEIIEDPETARKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTA--K----GVVTEDGVLHELD 374 (540)
T ss_dssp HHHHHHHHHHCCSHHHHHHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECS--S----EEEETTCCEEECS
T ss_pred HHHHHHHHHHcCCHHHHHhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEec--C----eEEcCCCCEEECC
Confidence 0 1144788886 778888864 2 4788999999999
Q ss_pred eEEEecCCCCCchhhhccccc-ccCcEEEecc----------ccc-CCCCEEEE-ccccccCccccCcccccccHHHHHH
Q 018416 130 MVVVGIGIRPNTSLFEGQLTL-EKGGIKVTGR----------LQS-SNSSVYAV-GDVAAFPLKLLGETRRLEHVDSARK 196 (356)
Q Consensus 130 ~vi~a~G~~p~~~l~~~~l~~-~~g~I~vd~~----------l~t-s~~~VyAi-GD~~~~~~~~~g~~~~~~~~~~A~~ 196 (356)
.||+|||+++++.++... .. .++++.++++ +.+ +.||+|.+ |..+... .....+..
T Consensus 375 vIV~ATGf~~~~~~~~~~-~i~g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~----------s~~~~~e~ 443 (540)
T 3gwf_A 375 VLVFATGFDAVDGNYRRI-EIRGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFT----------NLPPSIET 443 (540)
T ss_dssp EEEECCCBSCSSHHHHTS-EEECGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCS----------CHHHHHHH
T ss_pred EEEECCccCccccCcCcc-eEECCCCcCHHHhhccChhhccccccCCCCceEEEecCCCCCc----------cHHHHHHH
Confidence 999999999998654432 11 2334444432 233 78999999 8765411 12345667
Q ss_pred HHHHHHHHHc
Q 018416 197 SAKHAVAAIM 206 (356)
Q Consensus 197 ~g~~aa~~i~ 206 (356)
|++.+++.|.
T Consensus 444 q~~~i~~~i~ 453 (540)
T 3gwf_A 444 QVEWISDTIG 453 (540)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888887764
No 92
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.50 E-value=8.9e-14 Score=128.63 Aligned_cols=165 Identities=15% Similarity=0.137 Sum_probs=116.9
Q ss_pred CcEEEECCchHHHHHHHHHHHC-CCcEEEEeeCCccCCc------------------------------------c-CCH
Q 018416 40 GNAVVIGGGYIGMECAASLVIN-KINVTMVFPEAHCMAR------------------------------------L-FTP 81 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~-G~~Vtlv~~~~~~l~~------------------------------------~-~d~ 81 (356)
.+|+|||||++|+++|..|++. |.+|+|+++.+.+... . ...
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 119 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAA 119 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHH
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCHH
Confidence 4799999999999999999997 9999999998765211 0 124
Q ss_pred HHHHHHHHHHHh-CCCEEEeCCeeeEEEEcCCCcEEEEEeC---------CC-----cEEecCeEEEecCCCCCchh---
Q 018416 82 KIASYYEEYYKS-KGVKFVKGTVLSSFDVDSNGKVVAVNLR---------DG-----NRLPTDMVVVGIGIRPNTSL--- 143 (356)
Q Consensus 82 ~~~~~~~~~l~~-~GV~v~~~~~v~~i~~~~~g~v~~v~~~---------~g-----~~i~~D~vi~a~G~~p~~~l--- 143 (356)
++...+.+.+.+ .||+++++++++++.. +++.+..+.+. ++ .++++|.||+|+|..++..-
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~-~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~ 198 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIV-KGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGV 198 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEE-ETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHH
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEe-cCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHHH
Confidence 455566666765 6999999999999986 34555555542 22 57999999999998877531
Q ss_pred --hhc-c--ccc-ccCcEEEec-------ccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCC
Q 018416 144 --FEG-Q--LTL-EKGGIKVTG-------RLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEP 208 (356)
Q Consensus 144 --~~~-~--l~~-~~g~I~vd~-------~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 208 (356)
+.. . +.. ...++.+|. +.+|+.|++|++||++.. .+|.++..+.+..+..+|+.+|.++...
T Consensus 199 ~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~---~~g~~~~gp~~~~~~~sG~~~a~~i~~~ 273 (284)
T 1rp0_A 199 KRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAE---IDGAPRMGPTFGAMMISGQKAGQLALKA 273 (284)
T ss_dssp HHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEEEETTEEECTHHHHH---HHTCEECCSCCHHHHHHHHHHHHHHHHH
T ss_pred HHhhhccCCCCcCCcCCchhhhhhHHHhhccccccCCEEEEeeehhh---hcCCCCcChHHHHHHHhHHHHHHHHHHH
Confidence 110 1 111 123344442 446778999999998753 2344555566778889999999998753
No 93
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.34 E-value=6e-13 Score=134.02 Aligned_cols=181 Identities=12% Similarity=0.145 Sum_probs=115.0
Q ss_pred CCccCCCCCCC-CCC--eEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC-Cc--
Q 018416 4 KLEEFGLSGSD-AEN--VCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM-AR-- 77 (356)
Q Consensus 4 ~p~~~~ipG~~-~~~--v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l-~~-- 77 (356)
+|+.+++||.+ .++ +++.+...+.. ...+|+|+|||+|.+|+|+|..|++.+.+||+++|.+.+. +.
T Consensus 155 ~p~~p~i~G~~~f~G~~~hs~~~~~~~~-------~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~ 227 (542)
T 1w4x_A 155 VPQLPNFPGLKDFAGNLYHTGNWPHEPV-------DFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARN 227 (542)
T ss_dssp CCCCCCCTTGGGCCSEEEEGGGCCSSCC-------CCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCC
T ss_pred CCCCCCCCCcccCCCceEECCCCCCchh-------ccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCC
Confidence 57777899875 244 33222111111 1258999999999999999999999999999999988662 21
Q ss_pred -cCCHHHHH-----------------------------------------------------------------------
Q 018416 78 -LFTPKIAS----------------------------------------------------------------------- 85 (356)
Q Consensus 78 -~~d~~~~~----------------------------------------------------------------------- 85 (356)
.++++..+
T Consensus 228 ~~~~~~~~~~~~~~~p~l~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~ 307 (542)
T 1w4x_A 228 APLDPEFLADLKKRYAEFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAE 307 (542)
T ss_dssp CBCCHHHHHHHHTTHHHHHHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHH
T ss_pred CCCCHHHHHHHHhhCHHHHHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHH
Confidence 01221111
Q ss_pred HHHHHH-----------------------------------HhCCCEEE--eCCeeeEEEEcCCCcEEEEEeCCCcEEec
Q 018416 86 YYEEYY-----------------------------------KSKGVKFV--KGTVLSSFDVDSNGKVVAVNLRDGNRLPT 128 (356)
Q Consensus 86 ~~~~~l-----------------------------------~~~GV~v~--~~~~v~~i~~~~~g~v~~v~~~~g~~i~~ 128 (356)
.+++.+ .+.+|+++ .+..|+++++ + .|.++| +++++
T Consensus 308 ~~~~~~~~~~~~~~~~~~l~P~~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~--~----gv~~~d-~~~~~ 380 (542)
T 1w4x_A 308 FIRNKIRNTVRDPEVAERLVPKGYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITP--R----GVRTSE-REYEL 380 (542)
T ss_dssp HHHHHHHHHCSSHHHHHHHSCCSSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECS--S----EEEESS-CEEEC
T ss_pred HHHHHHHHHcCCHHHHHhcCCCCCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcC--C----eEEeCC-eEEec
Confidence 011111 11346666 3667888853 2 477888 89999
Q ss_pred CeEEEecCCCCCchhhhcccccccCcEEEecccc----------c-CCCCEEEE-ccccccCccccCcccccccH-HHHH
Q 018416 129 DMVVVGIGIRPNTSLFEGQLTLEKGGIKVTGRLQ----------S-SNSSVYAV-GDVAAFPLKLLGETRRLEHV-DSAR 195 (356)
Q Consensus 129 D~vi~a~G~~p~~~l~~~~l~~~~g~I~vd~~l~----------t-s~~~VyAi-GD~~~~~~~~~g~~~~~~~~-~~A~ 195 (356)
|.||+|+|+++++.++...-...++++.++++.+ . ..||+|++ |+.+... .+++ ..|.
T Consensus 381 D~ii~atG~~~~~~~~~~~~i~g~~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~---------~~~~~~~~e 451 (542)
T 1w4x_A 381 DSLVLATGFDALTGALFKIDIRGVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSA---------LSNMLVSIE 451 (542)
T ss_dssp SEEEECCCCCCTTHHHHTSEEECGGGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGG---------GSCHHHHHH
T ss_pred CEEEEcCCccccccCcCceeeECCCCCCHHHhhcCchheecccccCCCCceEEEcCCCCCcc---------cccHHHHHH
Confidence 9999999999988876542112334555555322 1 45666666 6654211 1333 6788
Q ss_pred HHHHHHHHHHcC
Q 018416 196 KSAKHAVAAIME 207 (356)
Q Consensus 196 ~~g~~aa~~i~g 207 (356)
.|++.++++|..
T Consensus 452 ~q~~~ia~~i~~ 463 (542)
T 1w4x_A 452 QHVEWVTDHIAY 463 (542)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999864
No 94
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.34 E-value=6.3e-13 Score=133.93 Aligned_cols=187 Identities=12% Similarity=0.115 Sum_probs=111.7
Q ss_pred CCccCCCCCCCC-CC--eEEeCCHHHHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCcc-CCc--
Q 018416 4 KLEEFGLSGSDA-EN--VCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHC-MAR-- 77 (356)
Q Consensus 4 ~p~~~~ipG~~~-~~--v~~l~~~~da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~-l~~-- 77 (356)
+|+.+++||.+. .+ +++.+...+...+.+.+ ...+|+|+|||+|.+|+|+|..|++.+.+||+++|.+++ ++.
T Consensus 148 ~p~~p~ipG~~~f~g~~~h~~~~~~~~~~~~~~~-~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~~~ 226 (545)
T 3uox_A 148 ASRMPDIKGIDSFKGESFHSSRWPTDAEGAPKGV-DFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGN 226 (545)
T ss_dssp C---CCCTTGGGCCSEEEEGGGCCBCTTSCBSCC-CCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEECCC
T ss_pred CCcCCCCCCccccCCCeEEccccccccccccccc-ccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccCCc
Confidence 678889999763 22 22222111100000001 125899999999999999999999999999999999984 332
Q ss_pred -cCCHHHHHHHH--------------------------------------------------------------------
Q 018416 78 -LFTPKIASYYE-------------------------------------------------------------------- 88 (356)
Q Consensus 78 -~~d~~~~~~~~-------------------------------------------------------------------- 88 (356)
.+++...+.++
T Consensus 227 ~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (545)
T 3uox_A 227 SPMSKEKMDSLRNRYPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLA 306 (545)
T ss_dssp CBCCHHHHHHHHHTHHHHHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTTTCHHHHHHHH
T ss_pred CCCCHHHHHHHHhhhHHHHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhhcCHHHHHHHH
Confidence 12222211111
Q ss_pred ---------------------------------------HHHHhCCCEEEe--CCeeeEEEEcCCCcEEEEEeCCCcEEe
Q 018416 89 ---------------------------------------EYYKSKGVKFVK--GTVLSSFDVDSNGKVVAVNLRDGNRLP 127 (356)
Q Consensus 89 ---------------------------------------~~l~~~GV~v~~--~~~v~~i~~~~~g~v~~v~~~~g~~i~ 127 (356)
+.|.+.+|+++. +..|++|++ + .|.+.|| +++
T Consensus 307 ~~~~~~~~~~v~d~~~~~~l~P~~~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~--~----gv~~~dG-~~~ 379 (545)
T 3uox_A 307 DFVAKKIRQRVKDPVVAEKLIPKDHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTP--E----GIKTADA-AYD 379 (545)
T ss_dssp HHHHHHHHHHCSCHHHHHHTSCSSSCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEET--T----EEEESSC-EEE
T ss_pred HHHHHHHHHHcCCHHHHHhCCCCCCCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEcc--C----eEEeCCC-eee
Confidence 011123788886 788888874 2 4778999 999
Q ss_pred cCeEEEecCCCCCchhhhccccc-ccCcEEEecc-----------cccCCCCEEEEccccccCccccCcccccccHHHHH
Q 018416 128 TDMVVVGIGIRPNTSLFEGQLTL-EKGGIKVTGR-----------LQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSAR 195 (356)
Q Consensus 128 ~D~vi~a~G~~p~~~l~~~~l~~-~~g~I~vd~~-----------l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~ 195 (356)
+|.||+|||+++++.++.. +.. ..++..++++ +-.+.||+|.+.--... .+.. .....+.
T Consensus 380 ~D~IV~ATGf~~~~~~~~~-~~i~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~gp~~~----~~~~---s~~~~~e 451 (545)
T 3uox_A 380 LDVIIYATGFDAVTGSLDR-IDIRGKDNVRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNG----STFC---NVGVCGG 451 (545)
T ss_dssp CSEEEECCCCBSSSCSCTT-SEEECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEECSSGGGT----GGGS---CHHHHHH
T ss_pred cCEEEECCccccccccCCC-ceEECCCCccHHHhhccccceeeccccCCCCcEEEEeCCCCC----Cccc---cHHHHHH
Confidence 9999999999987764432 222 2344444433 22378999998321111 1110 2234566
Q ss_pred HHHHHHHHHHc
Q 018416 196 KSAKHAVAAIM 206 (356)
Q Consensus 196 ~~g~~aa~~i~ 206 (356)
.|++.+++.|.
T Consensus 452 ~~~~~i~~~i~ 462 (545)
T 3uox_A 452 LQAEWVLRMIS 462 (545)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 78888888764
No 95
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.32 E-value=2.5e-12 Score=129.70 Aligned_cols=64 Identities=16% Similarity=0.198 Sum_probs=48.0
Q ss_pred CCccCCCCCCCC-CC-eEEeCCHH-HHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCcc
Q 018416 4 KLEEFGLSGSDA-EN-VCYLRDLA-DANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHC 74 (356)
Q Consensus 4 ~p~~~~ipG~~~-~~-v~~l~~~~-da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~ 74 (356)
+|+.+++||.+. .+ +++..... +.. ...+|+|+|||+|.+|+|+|..|++.+.+||+++|.+++
T Consensus 160 ~p~~p~ipG~~~f~g~~~~~~~~~~~~~-------~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 160 NANTPAFDGLDRFTGDIVHTARWPHDGV-------DFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp ECCCCCCTTGGGCCSEEEEGGGCCTTCC-------CCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCCCCCCCCcccCCCceEEecccccccc-------ccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 578888999763 22 23222211 111 125899999999999999999999999999999999974
No 96
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.13 E-value=3.1e-11 Score=120.29 Aligned_cols=138 Identities=12% Similarity=0.096 Sum_probs=99.0
Q ss_pred CccCCCCCCCCCCeEEeCCHHHHHHH---------HHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC
Q 018416 5 LEEFGLSGSDAENVCYLRDLADANRL---------VNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM 75 (356)
Q Consensus 5 p~~~~ipG~~~~~v~~l~~~~da~~i---------~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l 75 (356)
|...++++.+.+++++.++..+..++ ..........+|+|||||++|+.+|..|++.|.+|+|+++.+.+.
T Consensus 49 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g 128 (497)
T 2bry_A 49 SGGGLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFS 128 (497)
T ss_dssp TTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCC
T ss_pred CCCCcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccC
Confidence 44444555555566677777776665 111112245789999999999999999999999999999987642
Q ss_pred Cc----cC----------------------------CHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcC-CCcEEEEEe--
Q 018416 76 AR----LF----------------------------TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDS-NGKVVAVNL-- 120 (356)
Q Consensus 76 ~~----~~----------------------------d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~-~g~v~~v~~-- 120 (356)
.. .. ..++.+.+.+.+++.||++++++++++++.++ ++....+.+
T Consensus 129 ~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~ 208 (497)
T 2bry_A 129 RHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQP 208 (497)
T ss_dssp CCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEES
T ss_pred CCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEE
Confidence 10 00 05666778888888999999999999998631 222234555
Q ss_pred C-CC--cEEecCeEEEecCCCCCch
Q 018416 121 R-DG--NRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 121 ~-~g--~~i~~D~vi~a~G~~p~~~ 142 (356)
. +| +++.+|.||+|+|..+...
T Consensus 209 ~~~g~~~~i~ad~VV~A~G~~S~~r 233 (497)
T 2bry_A 209 NPPAQLASYEFDVLISAAGGKFVPE 233 (497)
T ss_dssp CCCHHHHTCCBSEEEECCCTTCCCT
T ss_pred CCCCCEEEEEcCEEEECCCCCcccc
Confidence 4 56 5799999999999988664
No 97
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.02 E-value=2.1e-09 Score=100.83 Aligned_cols=96 Identities=16% Similarity=0.215 Sum_probs=78.5
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC---------------------Ccc-CC---------HHHHHHHH
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM---------------------ARL-FT---------PKIASYYE 88 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l---------------------~~~-~d---------~~~~~~~~ 88 (356)
.+|+|||||+.|+.+|..|+++|.+|+++++.+.+. +.. .+ .++.+.+.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLA 83 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHH
Confidence 479999999999999999999999999999987531 100 00 67888889
Q ss_pred HHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCC
Q 018416 89 EYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGI 137 (356)
Q Consensus 89 ~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~ 137 (356)
+.+++.|++++++++|++++.+ ++.+..+++.++ ++.+|.||+|+|.
T Consensus 84 ~~~~~~~~~~~~~~~v~~i~~~-~~~~~~v~~~~g-~~~~d~vV~AtG~ 130 (357)
T 4a9w_A 84 QYEQKYALPVLRPIRVQRVSHF-GERLRVVARDGR-QWLARAVISATGT 130 (357)
T ss_dssp HHHHHTTCCEECSCCEEEEEEE-TTEEEEEETTSC-EEEEEEEEECCCS
T ss_pred HHHHHcCCEEEcCCEEEEEEEC-CCcEEEEEeCCC-EEEeCEEEECCCC
Confidence 9999999999999999999873 333322777776 8999999999995
No 98
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.99 E-value=1.5e-09 Score=109.00 Aligned_cols=101 Identities=18% Similarity=0.234 Sum_probs=84.4
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC-----------------------------------------Ccc
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM-----------------------------------------ARL 78 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l-----------------------------------------~~~ 78 (356)
.+|+|||+|+.|+.+|..|++.|.+|+|+|+++.+. ...
T Consensus 108 ~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~~ 187 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDPN 187 (549)
T ss_dssp CCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEecccc
Confidence 579999999999999999999999999999985430 000
Q ss_pred C------------------------------CHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEec
Q 018416 79 F------------------------------TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPT 128 (356)
Q Consensus 79 ~------------------------------d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~ 128 (356)
+ ..++.+.+.+.+++.|++++++++|+++.. +++.+..+++.+|+++.+
T Consensus 188 ~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~-~~~~v~gV~l~~G~~i~A 266 (549)
T 3nlc_A 188 FYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHM-EDGQITGVTLSNGEEIKS 266 (549)
T ss_dssp CHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEE-SSSBEEEEEETTSCEEEC
T ss_pred ccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEE-eCCEEEEEEECCCCEEEC
Confidence 0 145667778888889999999999999987 466677789999999999
Q ss_pred CeEEEecCCCCCc
Q 018416 129 DMVVVGIGIRPNT 141 (356)
Q Consensus 129 D~vi~a~G~~p~~ 141 (356)
|.||+|+|..+..
T Consensus 267 d~VVlA~G~~s~~ 279 (549)
T 3nlc_A 267 RHVVLAVGHSARD 279 (549)
T ss_dssp SCEEECCCTTCHH
T ss_pred CEEEECCCCChhh
Confidence 9999999998864
No 99
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.97 E-value=2.7e-09 Score=103.51 Aligned_cols=81 Identities=19% Similarity=0.288 Sum_probs=63.3
Q ss_pred HhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecC--------CCCCchhhhcc-cc--cccCcEEEecc
Q 018416 92 KSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIG--------IRPNTSLFEGQ-LT--LEKGGIKVTGR 160 (356)
Q Consensus 92 ~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G--------~~p~~~l~~~~-l~--~~~g~I~vd~~ 160 (356)
++.| +++++++|++|+.++++ ..|++.+|+++.+|.||+++| +.|+....... +. .....++|+.+
T Consensus 215 ~~~g-~i~~~~~V~~i~~~~~~--v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~~~~~~kv~~~ 291 (431)
T 3k7m_X 215 QEIP-EIRLQTVVTGIDQSGDV--VNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGHGGQGLKILIH 291 (431)
T ss_dssp TTCS-CEESSCCEEEEECSSSS--EEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCCCCCEEEEEEE
T ss_pred hhCC-ceEeCCEEEEEEEcCCe--EEEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCCCcceEEEEEE
Confidence 3456 99999999999864433 357888898899999999999 88887644322 22 13456999999
Q ss_pred cccCCCCEEEEcccc
Q 018416 161 LQSSNSSVYAVGDVA 175 (356)
Q Consensus 161 l~ts~~~VyAiGD~~ 175 (356)
++|+.+++|+.||+.
T Consensus 292 ~~~~~~~i~~~~d~~ 306 (431)
T 3k7m_X 292 VRGAEAGIECVGDGI 306 (431)
T ss_dssp EESCCTTEEEEBSSS
T ss_pred ECCCCcCceEcCCCC
Confidence 999999999999874
No 100
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.92 E-value=2.7e-09 Score=99.33 Aligned_cols=100 Identities=14% Similarity=0.191 Sum_probs=81.5
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC---------------Ccc---CCHHHHHHHHHHHHhCCCEEEeC
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM---------------ARL---FTPKIASYYEEYYKSKGVKFVKG 101 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l---------------~~~---~d~~~~~~~~~~l~~~GV~v~~~ 101 (356)
++|+|||||+.|+.+|..|++.|.+|+++++.+.+. +.. -..++...+.+.+++.|++++++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLE 87 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEcc
Confidence 589999999999999999999999999999987432 110 13677888888888899999999
Q ss_pred CeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCC---CCCc
Q 018416 102 TVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGI---RPNT 141 (356)
Q Consensus 102 ~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~---~p~~ 141 (356)
++|++++..+++. ..+.+.+|+ +.+|.||+|+|. .|..
T Consensus 88 ~~v~~i~~~~~~~-~~v~~~~g~-~~~d~vVlAtG~~~~~p~~ 128 (332)
T 3lzw_A 88 QAVESVEKQADGV-FKLVTNEET-HYSKTVIITAGNGAFKPRK 128 (332)
T ss_dssp CCEEEEEECTTSC-EEEEESSEE-EEEEEEEECCTTSCCEECC
T ss_pred CEEEEEEECCCCc-EEEEECCCE-EEeCEEEECCCCCcCCCCC
Confidence 9999998744423 357777776 999999999998 6654
No 101
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.92 E-value=3.9e-09 Score=98.46 Aligned_cols=102 Identities=16% Similarity=0.204 Sum_probs=80.2
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC----cc------------CCc----cCCHHHHHHHHHHHHhCCCE
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA----HC------------MAR----LFTPKIASYYEEYYKSKGVK 97 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~----~~------------l~~----~~d~~~~~~~~~~l~~~GV~ 97 (356)
..++|+|||+|+.|+.+|..|++.|.+|+|+++.+ .+ ++. ...+++...+.+.+++.|++
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 100 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTE 100 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCCE
Confidence 35789999999999999999999999999999954 11 111 11357888899999999999
Q ss_pred EEeCCeeeEEEEcCCCcEEEEEe---CCCcEEecCeEEEecCCCCCch
Q 018416 98 FVKGTVLSSFDVDSNGKVVAVNL---RDGNRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 98 v~~~~~v~~i~~~~~g~v~~v~~---~~g~~i~~D~vi~a~G~~p~~~ 142 (356)
++.++ +++++.+ ++.+ .+.+ .++.++.+|.+|+|+|.+|...
T Consensus 101 i~~~~-v~~i~~~-~~~~-~v~~~~~~~~~~~~~d~vvlAtG~~~~~~ 145 (338)
T 3itj_A 101 IITET-VSKVDLS-SKPF-KLWTEFNEDAEPVTTDAIILATGASAKRM 145 (338)
T ss_dssp EECSC-EEEEECS-SSSE-EEEETTCSSSCCEEEEEEEECCCEEECCC
T ss_pred EEEeE-EEEEEEc-CCEE-EEEEEecCCCcEEEeCEEEECcCCCcCCC
Confidence 99998 8899763 3333 4555 3678899999999999877643
No 102
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.92 E-value=6.7e-09 Score=96.11 Aligned_cols=100 Identities=10% Similarity=0.193 Sum_probs=79.9
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeC--Ccc--------CCc---cCCHHHHHHHHHHHHhCCCEEEeCCeeeE
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPE--AHC--------MAR---LFTPKIASYYEEYYKSKGVKFVKGTVLSS 106 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~--~~~--------l~~---~~d~~~~~~~~~~l~~~GV~v~~~~~v~~ 106 (356)
.+|+|||+|+.|+.+|..|++.|.+|+++++. ..+ .+. ....++.+.+.+.+++.|++++. +++++
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~ 94 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEK 94 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCEEE
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEE
Confidence 58999999999999999999999999999986 111 011 11357788888889999999999 89999
Q ss_pred EEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCch
Q 018416 107 FDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 107 i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 142 (356)
+..+ ++. ..+.+.+++++.+|.+|+|+|..|...
T Consensus 95 i~~~-~~~-~~v~~~~g~~~~~d~lvlAtG~~~~~~ 128 (323)
T 3f8d_A 95 IENR-GDE-FVVKTKRKGEFKADSVILGIGVKRRKL 128 (323)
T ss_dssp EEEC---C-EEEEESSSCEEEEEEEEECCCCEECCC
T ss_pred EEec-CCE-EEEEECCCCEEEcCEEEECcCCCCccC
Confidence 9863 332 457778888999999999999887653
No 103
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.88 E-value=1.2e-08 Score=95.39 Aligned_cols=98 Identities=12% Similarity=0.251 Sum_probs=79.5
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC------------------CccCCHHHHHHHHHHHHhCCCEEEe
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM------------------ARLFTPKIASYYEEYYKSKGVKFVK 100 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l------------------~~~~d~~~~~~~~~~l~~~GV~v~~ 100 (356)
..+++|||+|+.|+.+|..|++.|.+|+++++.+.+. +.....++.+.+.+.+++.+++++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 84 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSL 84 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEEe
Confidence 3589999999999999999999999999999986541 1101256777778888888999999
Q ss_pred CCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCC
Q 018416 101 GTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIR 138 (356)
Q Consensus 101 ~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~ 138 (356)
+++|++++.+++ ...+.+.+|+++.+|.+|+|+|..
T Consensus 85 ~~~v~~i~~~~~--~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 85 GERAETLEREGD--LFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp SCCEEEEEEETT--EEEEEETTSCEEEEEEEEECCTTS
T ss_pred CCEEEEEEECCC--EEEEEECCCCEEEeCEEEECCCCC
Confidence 999999986433 245777888899999999999984
No 104
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.87 E-value=1.6e-08 Score=95.83 Aligned_cols=99 Identities=14% Similarity=0.183 Sum_probs=81.1
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC-------C--------c---cCCHHHHHHHHHHHHhCCCEEEe
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM-------A--------R---LFTPKIASYYEEYYKSKGVKFVK 100 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l-------~--------~---~~d~~~~~~~~~~l~~~GV~v~~ 100 (356)
..+|+|||+|+.|+.+|..|++.|.+|+|+++.+.+. + . ....++.+.+.+.+++.|++++.
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 93 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVL 93 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEc
Confidence 4689999999999999999999999999999976531 1 0 01267777888888899999999
Q ss_pred CCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCC
Q 018416 101 GTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIR 138 (356)
Q Consensus 101 ~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~ 138 (356)
+++|++++..+++. ..+.+.+|+++.+|.+|+|+|..
T Consensus 94 ~~~v~~i~~~~~~~-~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 94 NETVTKYTKLDDGT-FETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp SCCEEEEEECTTSC-EEEEETTSCEEEEEEEEECCTTC
T ss_pred CCEEEEEEECCCce-EEEEECCCcEEEeeEEEEccCCC
Confidence 99999998744333 35778888899999999999984
No 105
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.87 E-value=9.7e-09 Score=93.95 Aligned_cols=99 Identities=16% Similarity=0.265 Sum_probs=77.6
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCcc---------CCc---cCCHHHHHHHHHHHHhC-CCEEEeCCeeeE
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHC---------MAR---LFTPKIASYYEEYYKSK-GVKFVKGTVLSS 106 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~---------l~~---~~d~~~~~~~~~~l~~~-GV~v~~~~~v~~ 106 (356)
.+++|||||+.|+.+|..|++.|.+|+++++.+.. ++. ....++...+.+.+++. +++++.+ ++++
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~ 81 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEG-RVTD 81 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEES-CEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEe-EEEE
Confidence 47999999999999999999999999999975321 111 11246777788888876 7888754 8899
Q ss_pred EEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCc
Q 018416 107 FDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 107 i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 141 (356)
++.++++ ..+.+.+|+++.+|.+|+|+|.+|..
T Consensus 82 i~~~~~~--~~v~~~~g~~~~~d~vviAtG~~~~~ 114 (297)
T 3fbs_A 82 AKGSFGE--FIVEIDGGRRETAGRLILAMGVTDEL 114 (297)
T ss_dssp EEEETTE--EEEEETTSCEEEEEEEEECCCCEEEC
T ss_pred EEEcCCe--EEEEECCCCEEEcCEEEECCCCCCCC
Confidence 9864333 46788889999999999999988754
No 106
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.86 E-value=2.1e-08 Score=95.80 Aligned_cols=98 Identities=22% Similarity=0.273 Sum_probs=81.0
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc-----------------------------------------
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR----------------------------------------- 77 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~----------------------------------------- 77 (356)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+.+...
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 468999999999999999999999999999998654210
Q ss_pred --cCC-----------HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCc
Q 018416 78 --LFT-----------PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 78 --~~d-----------~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 141 (356)
.++ .++.+.+.+.+++.||++++++++++++. ++ .+++.+|+++.+|.||.|+|..+..
T Consensus 91 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~g~~~~ad~vV~AdG~~s~v 162 (379)
T 3alj_A 91 VSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQTGEVLEADLIVGADGVGSKV 162 (379)
T ss_dssp EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETTSCEEECSEEEECCCTTCHH
T ss_pred eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECCCCEEEcCEEEECCCccHHH
Confidence 000 45567778888889999999999999975 44 5777889999999999999988754
No 107
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.86 E-value=9.5e-09 Score=100.01 Aligned_cols=99 Identities=20% Similarity=0.241 Sum_probs=79.7
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc---------------------------c-------------
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR---------------------------L------------- 78 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~---------------------------~------------- 78 (356)
..+|+|||||+.|+.+|..|+++|.+|+|+|+.+.+... +
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDF 106 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHHH
Confidence 458999999999999999999999999999998754210 0
Q ss_pred -----------------------CCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEec
Q 018416 79 -----------------------FTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGI 135 (356)
Q Consensus 79 -----------------------~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~ 135 (356)
-..++.+.+.+.+++.||+++++++|+++..++++ ..+.+.+| ++.+|.||+|+
T Consensus 107 ~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~--~~V~~~~g-~i~ad~VIlAt 183 (417)
T 3v76_A 107 VALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG--FRVTTSAG-TVDAASLVVAS 183 (417)
T ss_dssp HHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE--EEEEETTE-EEEESEEEECC
T ss_pred HHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE--EEEEECCc-EEEeeEEEECC
Confidence 01256677788888899999999999999864333 45777777 89999999999
Q ss_pred CCCCC
Q 018416 136 GIRPN 140 (356)
Q Consensus 136 G~~p~ 140 (356)
|..+.
T Consensus 184 G~~S~ 188 (417)
T 3v76_A 184 GGKSI 188 (417)
T ss_dssp CCSSC
T ss_pred CCccC
Confidence 98764
No 108
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.83 E-value=2.2e-08 Score=100.55 Aligned_cols=102 Identities=23% Similarity=0.235 Sum_probs=82.7
Q ss_pred CcEEEECCchHHHHHHHHHH-HCCCcEEEEeeCCccCC--------c------------cC----------------CHH
Q 018416 40 GNAVVIGGGYIGMECAASLV-INKINVTMVFPEAHCMA--------R------------LF----------------TPK 82 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~-~~G~~Vtlv~~~~~~l~--------~------------~~----------------d~~ 82 (356)
.+|+|||||+.|+.+|..|+ +.|.+|+|+++.+.+.. . .+ .++
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~e 88 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPE 88 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHH
Confidence 47999999999999999999 99999999999764320 0 01 246
Q ss_pred HHHHHHHHHHhCCC--EEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCC--CCCc
Q 018416 83 IASYYEEYYKSKGV--KFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGI--RPNT 141 (356)
Q Consensus 83 ~~~~~~~~l~~~GV--~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~--~p~~ 141 (356)
+.+.+.+..++.|+ +++++++|++++.++++....|++.+|+++.+|.||+|+|. +|..
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~ 151 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINF 151 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCC
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCC
Confidence 77788888888999 89999999999875554455788899999999999999994 5543
No 109
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.83 E-value=3.9e-09 Score=101.63 Aligned_cols=100 Identities=18% Similarity=0.314 Sum_probs=77.8
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCC--ccCCH---------HHHHHHHHHHHhCCCEEEeCCeeeEE
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA--RLFTP---------KIASYYEEYYKSKGVKFVKGTVLSSF 107 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~--~~~d~---------~~~~~~~~~l~~~GV~v~~~~~v~~i 107 (356)
.-+|+|||||+.|+.+|..|...+.+||++++.+.+.- ..++. ++.....+.+++.||+++++++++++
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~i 88 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATSI 88 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEEE
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEEE
Confidence 35899999999999999999888999999999876421 00111 11222456678899999999999999
Q ss_pred EEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCch
Q 018416 108 DVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 108 ~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 142 (356)
+. ++. .+++.+|+++.+|.+|+|+|.+|...
T Consensus 89 d~-~~~---~v~~~~g~~~~yd~lvlAtG~~p~~p 119 (385)
T 3klj_A 89 DP-NNK---LVTLKSGEKIKYEKLIIASGSIANKI 119 (385)
T ss_dssp ET-TTT---EEEETTSCEEECSEEEECCCEEECCC
T ss_pred EC-CCC---EEEECCCCEEECCEEEEecCCCcCCC
Confidence 75 233 46788999999999999999887653
No 110
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.83 E-value=3.9e-09 Score=103.12 Aligned_cols=99 Identities=21% Similarity=0.293 Sum_probs=78.2
Q ss_pred CcEEEECCchHHHHHHHHHHH---CCCcEEEEeeCCccCCc----------cCCHHHHHHHHHHHHhCCCEEEeCCeeeE
Q 018416 40 GNAVVIGGGYIGMECAASLVI---NKINVTMVFPEAHCMAR----------LFTPKIASYYEEYYKSKGVKFVKGTVLSS 106 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~---~G~~Vtlv~~~~~~l~~----------~~d~~~~~~~~~~l~~~GV~v~~~~~v~~ 106 (356)
++|+|||||+.|+++|..|++ .|.+|||+++.+...-. ....++...+.+.+++.||+++. .++++
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~ 83 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIA-QSAEQ 83 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEEC-SCEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEE-eEEEE
Confidence 689999999999999999999 89999999999864211 01223444456778889999985 68889
Q ss_pred EEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchh
Q 018416 107 FDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSL 143 (356)
Q Consensus 107 i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l 143 (356)
++. ++. .+++.+|+++.+|.+|+|+|.+|+...
T Consensus 84 id~-~~~---~V~~~~g~~i~~d~lviAtG~~~~~~~ 116 (437)
T 3sx6_A 84 IDA-EAQ---NITLADGNTVHYDYLMIATGPKLAFEN 116 (437)
T ss_dssp EET-TTT---EEEETTSCEEECSEEEECCCCEECGGG
T ss_pred EEc-CCC---EEEECCCCEEECCEEEECCCCCcCccc
Confidence 875 222 467888999999999999999988653
No 111
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.83 E-value=1.9e-08 Score=101.24 Aligned_cols=103 Identities=21% Similarity=0.282 Sum_probs=83.4
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCC--------------------ccC----------------CHH
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA--------------------RLF----------------TPK 82 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~--------------------~~~----------------d~~ 82 (356)
..+|+|||+|+.|+.+|..|++.|.+|+|+++.+.+.. ..+ .++
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~e 100 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPE 100 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHH
Confidence 35799999999999999999999999999999754320 001 246
Q ss_pred HHHHHHHHHHhCCC--EEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecC--CCCCc
Q 018416 83 IASYYEEYYKSKGV--KFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIG--IRPNT 141 (356)
Q Consensus 83 ~~~~~~~~l~~~GV--~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G--~~p~~ 141 (356)
+.+.+.+..++.|+ +++++++|++++.++++....|++.+|+++.+|.||+|+| .+|..
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~ 163 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANT 163 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCC
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCC
Confidence 77888888889998 8999999999987555445578889999999999999999 55554
No 112
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.82 E-value=2.2e-08 Score=92.60 Aligned_cols=98 Identities=15% Similarity=0.254 Sum_probs=77.4
Q ss_pred cEEEECCchHHHHHHHHHHHCCC-cEEEEeeCCc-----------cCCc---cCC-HHHHHHHHHHHHhCCCEEEeCCee
Q 018416 41 NAVVIGGGYIGMECAASLVINKI-NVTMVFPEAH-----------CMAR---LFT-PKIASYYEEYYKSKGVKFVKGTVL 104 (356)
Q Consensus 41 ~vvVvGgG~iGlE~A~~L~~~G~-~Vtlv~~~~~-----------~l~~---~~d-~~~~~~~~~~l~~~GV~v~~~~~v 104 (356)
+++|||+|+.|+.+|..|++.|. +|+++++.+. ..+. .++ .++.+.+.+.+++.|++++. .++
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v 81 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM-TAV 81 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC-SCE
T ss_pred eEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE-EEE
Confidence 69999999999999999999999 9999998531 0111 122 56777888888999999998 788
Q ss_pred eEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCc
Q 018416 105 SSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 105 ~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 141 (356)
++++.++ +. ..+.+.+|+++.+|.+|+|+|.+|..
T Consensus 82 ~~i~~~~-~~-~~v~~~~g~~~~~~~vv~AtG~~~~~ 116 (311)
T 2q0l_A 82 QRVSKKD-SH-FVILAEDGKTFEAKSVIIATGGSPKR 116 (311)
T ss_dssp EEEEEET-TE-EEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEEEcC-CE-EEEEEcCCCEEECCEEEECCCCCCCC
Confidence 8887633 32 34667888899999999999987654
No 113
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.82 E-value=7e-08 Score=91.63 Aligned_cols=98 Identities=16% Similarity=0.206 Sum_probs=72.6
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc-------------------------------------------
Q 018416 41 NAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR------------------------------------------- 77 (356)
Q Consensus 41 ~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~------------------------------------------- 77 (356)
.|+|||||+.|+-+|..|++.|++|+|+|+.+.+...
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPII 85 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceEee
Confidence 5999999999999999999999999999987543110
Q ss_pred ------------cCC-HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEe-CCC--cEEecCeEEEecCCCC
Q 018416 78 ------------LFT-PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNL-RDG--NRLPTDMVVVGIGIRP 139 (356)
Q Consensus 78 ------------~~d-~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~-~~g--~~i~~D~vi~a~G~~p 139 (356)
.++ ..+...+.+..++.|++++.+++++.+.. +++.+..+.. .++ .++.+|+||-|.|...
T Consensus 86 ~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~-~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 86 LQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIK-ENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEE-ETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred ccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeee-ccceeeeeeecccccceEEEEeEEEeCCcccc
Confidence 001 23445566677788999999999999876 4555544433 233 3688999999999654
No 114
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.82 E-value=1.7e-08 Score=93.27 Aligned_cols=101 Identities=14% Similarity=0.178 Sum_probs=79.2
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEeeCC--ccC-----------CccCCHHHHHHHHHHHHhCCCEEEeCCeeeEE
Q 018416 41 NAVVIGGGYIGMECAASLVINKINVTMVFPEA--HCM-----------ARLFTPKIASYYEEYYKSKGVKFVKGTVLSSF 107 (356)
Q Consensus 41 ~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~--~~l-----------~~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i 107 (356)
+++|||+|+.|+.+|..|++.|.+|+++++.. .+. +....+++.+.+.+.+++.|++++.+++++.+
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i 82 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKL 82 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEE
Confidence 69999999999999999999999999997631 110 00012577788888899999999999999999
Q ss_pred EEcCC-CcEEEEEeCCCcEEecCeEEEecCCCCCc
Q 018416 108 DVDSN-GKVVAVNLRDGNRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 108 ~~~~~-g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 141 (356)
+.+.+ +....+.+.+|+++.+|.+|+|+|.+|..
T Consensus 83 ~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 83 IPAAVEGGLHQIETASGAVLKARSIIVATGAKWRN 117 (310)
T ss_dssp ECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EecccCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 75322 22346778888899999999999987754
No 115
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.79 E-value=5.8e-08 Score=91.87 Aligned_cols=98 Identities=16% Similarity=0.214 Sum_probs=75.8
Q ss_pred CcEEEECCchHHHHHHHHHHHCCC-cEEEEeeCC------------ccCCc----------------------------c
Q 018416 40 GNAVVIGGGYIGMECAASLVINKI-NVTMVFPEA------------HCMAR----------------------------L 78 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~-~Vtlv~~~~------------~~l~~----------------------------~ 78 (356)
.+|+|||||+.|+.+|..|++.|. +|+++++.+ +++.. .
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 84 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEH 84 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCCSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhccccccccccccccC
Confidence 479999999999999999999999 999999875 00000 0
Q ss_pred CC-HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCC
Q 018416 79 FT-PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPN 140 (356)
Q Consensus 79 ~d-~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~ 140 (356)
.+ .++...+.+.+++.|++++.++.|++++.++++ ..+.+.++ ++.+|.||+|+|..+.
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISADDAY--YTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS--EEEEESSC-CEEEEEEEECCCSTTS
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCe--EEEEeCCC-EEEeCEEEECCCCCCc
Confidence 01 345666777788899999999999999874333 34666666 6999999999998754
No 116
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.79 E-value=1.1e-07 Score=94.63 Aligned_cols=195 Identities=11% Similarity=0.070 Sum_probs=105.4
Q ss_pred CccCCCCCCCCCCeEEeCCHHHHHHHHHHH-hcCCCCcEEEECCchHHHHHHHHHHHC--CCcEEEEeeCCccCCcc---
Q 018416 5 LEEFGLSGSDAENVCYLRDLADANRLVNVM-KSCSGGNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCMARL--- 78 (356)
Q Consensus 5 p~~~~ipG~~~~~v~~l~~~~da~~i~~~l-~~~~~~~vvVvGgG~iGlE~A~~L~~~--G~~Vtlv~~~~~~l~~~--- 78 (356)
|+.++.++. .+.+++-..+.+... ... ....+|+|+|||+|.+|+|++..|++. +.+|+++.|++.+.+..
T Consensus 214 P~iP~~~~~-~g~v~Hss~y~~~~~--~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~~~p~~~s~ 290 (501)
T 4b63_A 214 AKMPSGLPQ-DPRIIHSSKYCTTLP--ALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSAMRPSDDSP 290 (501)
T ss_dssp ECCCTTSCC-CTTEEEGGGHHHHHH--HHSCCTTSCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSSCCBCCCCT
T ss_pred CCCCCCCCC-Ccceeeccccccchh--hccccccCCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCccccccccc
Confidence 444444433 245665544433221 111 123689999999999999999999875 78999999987654321
Q ss_pred -----CCHH-------------------------------HHHHHHHHH-Hh---------CCCEEEeCCeeeEEEEcCC
Q 018416 79 -----FTPK-------------------------------IASYYEEYY-KS---------KGVKFVKGTVLSSFDVDSN 112 (356)
Q Consensus 79 -----~d~~-------------------------------~~~~~~~~l-~~---------~GV~v~~~~~v~~i~~~~~ 112 (356)
++++ ..+.+.+.+ ++ ....+..+..+..+.....
T Consensus 291 ~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~ 370 (501)
T 4b63_A 291 FVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPDETQWQHRILPERKITRVEHHGP 370 (501)
T ss_dssp TGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSCGGGCSSEEECSEEEEEEECCSS
T ss_pred cchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCcccccceeecCCcceeeeeecCC
Confidence 1111 111111111 10 1224555555655543222
Q ss_pred -CcE-----------EEEEeCCCcEEecCeEEEecCCCCCch-hhhcc---ccc-ccCcEEEeccccc--------CCCC
Q 018416 113 -GKV-----------VAVNLRDGNRLPTDMVVVGIGIRPNTS-LFEGQ---LTL-EKGGIKVTGRLQS--------SNSS 167 (356)
Q Consensus 113 -g~v-----------~~v~~~~g~~i~~D~vi~a~G~~p~~~-l~~~~---l~~-~~g~I~vd~~l~t--------s~~~ 167 (356)
+.+ ..+.+.+|+++++|.||+|||++|+.. ++... +.. .+|...|+..++. ..++
T Consensus 371 ~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~d~~g~~~v~rdy~~~~~~~~~~~~~~ 450 (501)
T 4b63_A 371 QSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWKPHRDYRVEMDPSKVSSEAG 450 (501)
T ss_dssp SSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTGGGGGGSSTTCCSCCBCTTSBBCCCTTTBCTTCE
T ss_pred CCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcchhhhcCcCcCCCeeeCCCcEEeecCCccCCCce
Confidence 211 124456889999999999999998864 22221 222 4577778765442 2467
Q ss_pred EEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCC
Q 018416 168 VYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEP 208 (356)
Q Consensus 168 VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 208 (356)
||+-|-+-..... +.+ -+--.|.+.|++ ++.|+|+
T Consensus 451 i~~qg~~~~thG~--~~~---~Ls~~a~R~~~I-~~~l~g~ 485 (501)
T 4b63_A 451 IWLQGCNERTHGL--SDS---LLSVLAVRGGEM-VQSIFGE 485 (501)
T ss_dssp EEECSCCHHHHCT--TTT---SSTTHHHHHHHH-HHHHHHH
T ss_pred EEecCCCcccCCc--chh---hHHHHHHHHHHH-HHHHhcc
Confidence 9999954322111 111 111246666664 4556664
No 117
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.79 E-value=3.3e-08 Score=91.53 Aligned_cols=100 Identities=11% Similarity=0.141 Sum_probs=72.0
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEeeCCcc----------C--CccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEE
Q 018416 41 NAVVIGGGYIGMECAASLVINKINVTMVFPEAHC----------M--ARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFD 108 (356)
Q Consensus 41 ~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~----------l--~~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~ 108 (356)
.|+|||+|+.|+.+|..|+++|.+|+++++...- . +....+++.+...+.+.+.+...+....+..+.
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMIT 87 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEee
Confidence 6999999999999999999999999999986321 0 111234566666666666554444445555665
Q ss_pred EcCCCcEEEEEeCCCcEEecCeEEEecCCCCCc
Q 018416 109 VDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 109 ~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 141 (356)
..+++. ..+.+.+|+++.+|.+|+|||.+|..
T Consensus 88 ~~~~~~-~~v~~~~g~~~~a~~liiATGs~p~~ 119 (304)
T 4fk1_A 88 KQSTGL-FEIVTKDHTKYLAERVLLATGMQEEF 119 (304)
T ss_dssp ECTTSC-EEEEETTCCEEEEEEEEECCCCEEEC
T ss_pred ecCCCc-EEEEECCCCEEEeCEEEEccCCcccc
Confidence 534443 46788899999999999999988754
No 118
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.78 E-value=4e-08 Score=95.04 Aligned_cols=100 Identities=16% Similarity=0.184 Sum_probs=79.3
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCC--------------------cc---------------------
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA--------------------RL--------------------- 78 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~--------------------~~--------------------- 78 (356)
.+|+|||||+.|+.+|..|+++|.+|+|+|+.+.+.. .+
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFI 84 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHHH
Confidence 4799999999999999999999999999999875410 00
Q ss_pred ----------------------CCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcC---CCcEEEEEeCCCcEEecCeEEE
Q 018416 79 ----------------------FTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDS---NGKVVAVNLRDGNRLPTDMVVV 133 (356)
Q Consensus 79 ----------------------~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~---~g~v~~v~~~~g~~i~~D~vi~ 133 (356)
-..++.+.+.+.+++.||++++++.++++..++ ++. ..+++.++ ++.+|.||+
T Consensus 85 ~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g-~i~ad~VVl 162 (401)
T 2gqf_A 85 SLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNST-QWQCKNLIV 162 (401)
T ss_dssp HHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTE-EEEESEEEE
T ss_pred HHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCC-EEECCEEEE
Confidence 124555677888888999999999999998631 333 35666666 799999999
Q ss_pred ecCCCCCc
Q 018416 134 GIGIRPNT 141 (356)
Q Consensus 134 a~G~~p~~ 141 (356)
|+|..+..
T Consensus 163 AtG~~s~p 170 (401)
T 2gqf_A 163 ATGGLSMP 170 (401)
T ss_dssp CCCCSSCG
T ss_pred CCCCccCC
Confidence 99998854
No 119
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.77 E-value=3.5e-08 Score=91.95 Aligned_cols=101 Identities=14% Similarity=0.147 Sum_probs=77.5
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc-----------cCCcc----CCHHHHHHHHHHHHhCCCEEEeCCee
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH-----------CMARL----FTPKIASYYEEYYKSKGVKFVKGTVL 104 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~-----------~l~~~----~d~~~~~~~~~~l~~~GV~v~~~~~v 104 (356)
.+++|||+|+.|+.+|..|++.|.+|+++++... ..+.+ ...++.+.+.+.+++.|++++. .++
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v 87 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM-DEV 87 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE-CCE
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe-eeE
Confidence 5799999999999999999999999999999721 01110 1246777788888999999997 588
Q ss_pred eEEEEcC-CCcEEEEEeCCCcEEecCeEEEecCCCCCc
Q 018416 105 SSFDVDS-NGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 105 ~~i~~~~-~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 141 (356)
++++... ++....+.+.+|+++.+|.+|+|+|.+|..
T Consensus 88 ~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~ 125 (325)
T 2q7v_A 88 QGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRK 125 (325)
T ss_dssp EEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECC
T ss_pred EEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 8887631 221123556788899999999999987754
No 120
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.77 E-value=2.2e-08 Score=93.56 Aligned_cols=98 Identities=12% Similarity=0.196 Sum_probs=76.6
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEee----CCcc------------CCc----cCCHHHHHHHHHHHHhCCCEEE
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFP----EAHC------------MAR----LFTPKIASYYEEYYKSKGVKFV 99 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~----~~~~------------l~~----~~d~~~~~~~~~~l~~~GV~v~ 99 (356)
.+|+|||+|+.|+.+|..|++.|.+|+++++ ...+ .+. ....++.+.+.+.+++.|++++
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~ 88 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTIF 88 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEEE
Confidence 5799999999999999999999999999998 2211 111 1124677788888899999999
Q ss_pred eCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCc
Q 018416 100 KGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 100 ~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 141 (356)
.++ ++.++..+ +. ..+.+ +++++.+|.+|+|+|.+|..
T Consensus 89 ~~~-v~~i~~~~-~~-~~v~~-~~~~~~~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 89 TET-VTKVDFSS-KP-FKLFT-DSKAILADAVILAIGAVAKR 126 (333)
T ss_dssp CCC-CCEEECSS-SS-EEEEC-SSEEEEEEEEEECCCEEECC
T ss_pred EeE-EEEEEEcC-CE-EEEEE-CCcEEEcCEEEECCCCCcCC
Confidence 987 88887533 32 34555 77889999999999987654
No 121
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.77 E-value=1.2e-09 Score=102.63 Aligned_cols=41 Identities=12% Similarity=0.303 Sum_probs=34.2
Q ss_pred HhcCCCCcEEEECCchHHHHHHHHHHH--CCCcEEEEeeCCcc
Q 018416 34 MKSCSGGNAVVIGGGYIGMECAASLVI--NKINVTMVFPEAHC 74 (356)
Q Consensus 34 l~~~~~~~vvVvGgG~iGlE~A~~L~~--~G~~Vtlv~~~~~~ 74 (356)
+.......|+|||+|+.|+.+|..|++ .|.+|+|+|+.+.+
T Consensus 60 ~~~~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~ 102 (326)
T 3fpz_A 60 LDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp HHHTTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred hhhccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCC
Confidence 333345689999999999999999974 59999999998764
No 122
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.77 E-value=5e-08 Score=95.63 Aligned_cols=100 Identities=26% Similarity=0.350 Sum_probs=80.9
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCC-------------------c-----------------------
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA-------------------R----------------------- 77 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~-------------------~----------------------- 77 (356)
.+|+|||||+.|+.+|..|++.|.+|+|+|+.+.+.. .
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNED 106 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHHH
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHHH
Confidence 5799999999999999999999999999998764310 0
Q ss_pred -------------------cC-----CHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEE
Q 018416 78 -------------------LF-----TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVV 133 (356)
Q Consensus 78 -------------------~~-----d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~ 133 (356)
.+ ...+.+.+.+.+++.||+++++++|+++.. +++.+..+++.+|+++.+|.||+
T Consensus 107 ~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~-~~~~v~~V~~~~G~~i~Ad~VVl 185 (447)
T 2i0z_A 107 IITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEY-ENGQTKAVILQTGEVLETNHVVI 185 (447)
T ss_dssp HHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTCCEEECSCEEE
T ss_pred HHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEe-cCCcEEEEEECCCCEEECCEEEE
Confidence 00 134455677778889999999999999986 45666678888888899999999
Q ss_pred ecCCCCC
Q 018416 134 GIGIRPN 140 (356)
Q Consensus 134 a~G~~p~ 140 (356)
|+|..+.
T Consensus 186 AtGg~s~ 192 (447)
T 2i0z_A 186 AVGGKSV 192 (447)
T ss_dssp CCCCSSS
T ss_pred CCCCCcC
Confidence 9998773
No 123
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.77 E-value=5.8e-09 Score=100.45 Aligned_cols=100 Identities=23% Similarity=0.325 Sum_probs=73.6
Q ss_pred CCcEEEECCchHHHHHHHHHHHCC--CcEEEEeeCCccCCccCCHHHH---------HHHHHHHHhCCCEEEeCCeeeEE
Q 018416 39 GGNAVVIGGGYIGMECAASLVINK--INVTMVFPEAHCMARLFTPKIA---------SYYEEYYKSKGVKFVKGTVLSSF 107 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G--~~Vtlv~~~~~~l~~~~d~~~~---------~~~~~~l~~~GV~v~~~~~v~~i 107 (356)
+|||||||||+.|+.+|..|++.+ .+||||++.+......+...+. ..-.+.+.++||+++.+ ++++|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~-~v~~i 80 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHD-SALGI 80 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECS-CEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEe-EEEEE
Confidence 799999999999999999999876 5899999987532211111111 11124566789999865 68888
Q ss_pred EEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchh
Q 018416 108 DVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSL 143 (356)
Q Consensus 108 ~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l 143 (356)
+. +.+ .+.+.+|+++++|.+++|+|.+|+..-
T Consensus 81 d~--~~~--~v~~~~g~~i~yd~LviAtG~~~~~~~ 112 (401)
T 3vrd_B 81 DP--DKK--LVKTAGGAEFAYDRCVVAPGIDLLYDK 112 (401)
T ss_dssp ET--TTT--EEEETTSCEEECSEEEECCCEEECGGG
T ss_pred Ec--cCc--EEEecccceeecceeeeccCCccccCC
Confidence 75 232 467889999999999999999877643
No 124
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.77 E-value=2.4e-09 Score=104.52 Aligned_cols=96 Identities=20% Similarity=0.271 Sum_probs=72.0
Q ss_pred CcEEEECCchHHHHHHHHHHHCC--CcEEEEeeCCccCCccC---------C-HHHHHHHHHHHHhCCCEEEeCCeeeEE
Q 018416 40 GNAVVIGGGYIGMECAASLVINK--INVTMVFPEAHCMARLF---------T-PKIASYYEEYYKSKGVKFVKGTVLSSF 107 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G--~~Vtlv~~~~~~l~~~~---------d-~~~~~~~~~~l~~~GV~v~~~~~v~~i 107 (356)
|+|||||||+.|+.+|..|++++ .+||||++.+...-... + .++...+.+.+++.||+++.+ ++++|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~-~v~~I 81 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEe-EEEEE
Confidence 78999999999999999999876 78999999886421101 1 111122345567789999876 68899
Q ss_pred EEcCCCcEEEEEeCCCcEEecCeEEEecCCCCC
Q 018416 108 DVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPN 140 (356)
Q Consensus 108 ~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~ 140 (356)
+. +.+ .|++++|+++++|.+|+|+|.++.
T Consensus 82 d~--~~~--~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 82 DP--DAN--TVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp ET--TTT--EEEETTCCEEECSEEEECCCCEEE
T ss_pred EC--CCC--EEEECCCCEEECCEEEEeCCCCcc
Confidence 75 232 477899999999999999998653
No 125
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.77 E-value=2.7e-08 Score=100.54 Aligned_cols=134 Identities=16% Similarity=0.158 Sum_probs=96.1
Q ss_pred CCCCCCCCCCeEEeCCHHHHHHHHHHHhcC--CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCcc-------
Q 018416 8 FGLSGSDAENVCYLRDLADANRLVNVMKSC--SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARL------- 78 (356)
Q Consensus 8 ~~ipG~~~~~v~~l~~~~da~~i~~~l~~~--~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~------- 78 (356)
+++|+.+.+++..++...+...|.+.+... ..-.|+|||+|..|+.+|..|++.|.+|+|+++.+.+....
T Consensus 88 ~~~p~~~~~~~~~w~~~~~~~~i~~~i~~~~~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~ 167 (566)
T 1qo8_A 88 KPMPFSDAKKKKSWDDGWDQDKIQKAIAAGPSETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGM 167 (566)
T ss_dssp CCCTTTTSCCCCCSCCCCCHHHHHHHHHTCCSEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCE
T ss_pred CCCCCCCCCCCcccccccccHHHHHhhccCCCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCcee
Confidence 567777776677666644555554444311 12369999999999999999999999999999876432100
Q ss_pred -------------------------------C------------------------------------------------
Q 018416 79 -------------------------------F------------------------------------------------ 79 (356)
Q Consensus 79 -------------------------------~------------------------------------------------ 79 (356)
.
T Consensus 168 ~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~ 247 (566)
T 1qo8_A 168 NAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQNDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKS 247 (566)
T ss_dssp ECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSC
T ss_pred EccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCC
Confidence 0
Q ss_pred -CHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeC--CCc--EEecCeEEEecCCCCCc
Q 018416 80 -TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR--DGN--RLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 80 -d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~--~g~--~i~~D~vi~a~G~~p~~ 141 (356)
...+...+.+.+++.||++++++.++++..++++++..+.+. +|+ ++.+|.||+|+|.....
T Consensus 248 ~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~ 314 (566)
T 1qo8_A 248 SGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMN 314 (566)
T ss_dssp HHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTC
T ss_pred CHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccC
Confidence 123445566777888999999999999987433777666654 675 68999999999966543
No 126
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.76 E-value=5.6e-08 Score=95.81 Aligned_cols=103 Identities=16% Similarity=0.246 Sum_probs=77.8
Q ss_pred CcEEEECCchHHHHHHHHHHH---CCCc---EEEEeeCCccCCc----------------------------------c-
Q 018416 40 GNAVVIGGGYIGMECAASLVI---NKIN---VTMVFPEAHCMAR----------------------------------L- 78 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~---~G~~---Vtlv~~~~~~l~~----------------------------------~- 78 (356)
++|+|||||+.|+.+|..|++ .|.+ |+++++.+.+... +
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 689999999999999999999 9999 9999998653100 0
Q ss_pred -C---------------CHHHHHHHHHHHHhCCCE--EEeCCeeeEEEEcCCCcEEEEEeCC---C--cEEecCeEEEec
Q 018416 79 -F---------------TPKIASYYEEYYKSKGVK--FVKGTVLSSFDVDSNGKVVAVNLRD---G--NRLPTDMVVVGI 135 (356)
Q Consensus 79 -~---------------d~~~~~~~~~~l~~~GV~--v~~~~~v~~i~~~~~g~v~~v~~~~---g--~~i~~D~vi~a~ 135 (356)
+ ..++.+.+.+.+++.|++ ++++++|++++..+++....|++.+ | .++.+|.||+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 0 145667777778888998 9999999999864432122444443 4 578999999999
Q ss_pred C--CCCCch
Q 018416 136 G--IRPNTS 142 (356)
Q Consensus 136 G--~~p~~~ 142 (356)
| .+|+..
T Consensus 163 G~~s~p~~p 171 (464)
T 2xve_A 163 GHFSTPYVP 171 (464)
T ss_dssp CSSSSBCCC
T ss_pred CCCCCCccC
Confidence 9 677654
No 127
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.74 E-value=4.9e-08 Score=93.80 Aligned_cols=101 Identities=22% Similarity=0.176 Sum_probs=79.6
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCC-------------------------------------------
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA------------------------------------------- 76 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~------------------------------------------- 76 (356)
.+|+|||||+.|+.+|..|++.|.+|+|+|+.+.+..
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 86 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL 86 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCCE
Confidence 4799999999999999999999999999998764300
Q ss_pred --c-------------cC-CHHHHHHHHHHHHhC-CCEEEeCCeeeEEEEcCCCcEE-EEEeCCCcEEecCeEEEecCCC
Q 018416 77 --R-------------LF-TPKIASYYEEYYKSK-GVKFVKGTVLSSFDVDSNGKVV-AVNLRDGNRLPTDMVVVGIGIR 138 (356)
Q Consensus 77 --~-------------~~-d~~~~~~~~~~l~~~-GV~v~~~~~v~~i~~~~~g~v~-~v~~~~g~~i~~D~vi~a~G~~ 138 (356)
. .+ ..++.+.+.+.+++. |+++++++++++++.++++ +. .+++.+|+++.+|.||.|.|..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~g~v~~~~g~~~~ad~vV~AdG~~ 165 (399)
T 2x3n_A 87 LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERH-AIDQVRLNDGRVLRPRVVVGADGIA 165 (399)
T ss_dssp EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS-CEEEEEETTSCEEEEEEEEECCCTT
T ss_pred EEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc-eEEEEEECCCCEEECCEEEECCCCC
Confidence 0 00 124556667777777 9999999999999874443 32 5778899899999999999987
Q ss_pred CCc
Q 018416 139 PNT 141 (356)
Q Consensus 139 p~~ 141 (356)
+..
T Consensus 166 s~v 168 (399)
T 2x3n_A 166 SYV 168 (399)
T ss_dssp CHH
T ss_pred hHH
Confidence 653
No 128
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.74 E-value=8e-09 Score=99.85 Aligned_cols=98 Identities=22% Similarity=0.332 Sum_probs=75.0
Q ss_pred CcEEEECCchHHHHHHHHHHH---CCCcEEEEeeCCccCCc----------cCCHHHHHHHHHHHHhCCCEEEeCCeeeE
Q 018416 40 GNAVVIGGGYIGMECAASLVI---NKINVTMVFPEAHCMAR----------LFTPKIASYYEEYYKSKGVKFVKGTVLSS 106 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~---~G~~Vtlv~~~~~~l~~----------~~d~~~~~~~~~~l~~~GV~v~~~~~v~~ 106 (356)
++|+|||||+.|+++|..|++ .|.+|||+++.+.+... ....++...+.+.+++.||+++.+ ++++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEK 80 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEE
Confidence 579999999999999999999 89999999998764210 012234445667778889999988 8888
Q ss_pred EEEcCCCcEEEEEeCCCc----EEecCeEEEecCCCCCch
Q 018416 107 FDVDSNGKVVAVNLRDGN----RLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 107 i~~~~~g~v~~v~~~~g~----~i~~D~vi~a~G~~p~~~ 142 (356)
++. ++. .+++.+++ ++++|.||+|+|.+|+..
T Consensus 81 i~~-~~~---~V~~~~g~~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 81 IDA-KSS---MVYYTKPDGSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp EET-TTT---EEEEECTTSCEEEEECSEEEECCCCEECGG
T ss_pred EeC-CCC---EEEEccCCcccceeeCCEEEECCCCCcCcc
Confidence 875 222 34455554 399999999999988764
No 129
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.74 E-value=3.6e-08 Score=99.15 Aligned_cols=102 Identities=17% Similarity=0.182 Sum_probs=80.9
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC-------------------------C---------cc--CCHHH
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM-------------------------A---------RL--FTPKI 83 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l-------------------------~---------~~--~d~~~ 83 (356)
.+|+|||||+.|+.+|..|++.|.+|+|+++.+.+. + .. -.+++
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ei 89 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEM 89 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHHH
Confidence 579999999999999999999999999999986431 0 00 13677
Q ss_pred HHHHHHHHHhCCC--EEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecC--CCCCc
Q 018416 84 ASYYEEYYKSKGV--KFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIG--IRPNT 141 (356)
Q Consensus 84 ~~~~~~~l~~~GV--~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G--~~p~~ 141 (356)
.+.+.+..++.|+ +++++++|++++.++++....|++.+|+++.+|.||+|+| .+|+.
T Consensus 90 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~ 151 (545)
T 3uox_A 90 LRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRM 151 (545)
T ss_dssp HHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---
T ss_pred HHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcC
Confidence 7888888888888 7899999999976444444568888999999999999999 55554
No 130
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.72 E-value=5.4e-08 Score=93.61 Aligned_cols=102 Identities=17% Similarity=0.247 Sum_probs=76.5
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc-----cCCHHHHHH--------------------------
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR-----LFTPKIASY-------------------------- 86 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~-----~~d~~~~~~-------------------------- 86 (356)
...+|+|||||+.|+.+|..|++.|.+|+|+|+.+.+... .+.+...+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g 83 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTG 83 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCC
Confidence 3568999999999999999999999999999998764211 123332222
Q ss_pred -----------------HHHHHHh--CCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCc
Q 018416 87 -----------------YEEYYKS--KGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 87 -----------------~~~~l~~--~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 141 (356)
+.+.|.+ .|+++++++++++++.++++ ..+++.+|+++.+|.||.|.|..+..
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~ad~vV~AdG~~S~v 155 (397)
T 2vou_A 84 ERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSET--VQMRFSDGTKAEANWVIGADGGASVV 155 (397)
T ss_dssp CEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSC--EEEEETTSCEEEESEEEECCCTTCHH
T ss_pred CccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCE--EEEEECCCCEEECCEEEECCCcchhH
Confidence 2222222 38999999999999874444 35788899999999999999987653
No 131
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.72 E-value=8.4e-08 Score=95.91 Aligned_cols=104 Identities=13% Similarity=0.186 Sum_probs=81.5
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC--ccC-----------CccCCHHHHHHHHHHHHhCCCEEEeCCee
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA--HCM-----------ARLFTPKIASYYEEYYKSKGVKFVKGTVL 104 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~--~~l-----------~~~~d~~~~~~~~~~l~~~GV~v~~~~~v 104 (356)
...+|+|||||+.|+.+|..|++.|.+|+++++.. .+. +....+++...+.+.+++.||+++.++++
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v 290 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSA 290 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSCCE
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCCEE
Confidence 34579999999999999999999999999998631 111 11123577888888999999999999999
Q ss_pred eEEEEcCC-CcEEEEEeCCCcEEecCeEEEecCCCCCc
Q 018416 105 SSFDVDSN-GKVVAVNLRDGNRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 105 ~~i~~~~~-g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 141 (356)
+++..+.+ +....+.+.+|+++.+|.+|+|+|.+|..
T Consensus 291 ~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~ 328 (521)
T 1hyu_A 291 SKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRN 328 (521)
T ss_dssp EEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCC
Confidence 99974221 22346778889999999999999987653
No 132
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.70 E-value=1.3e-08 Score=97.38 Aligned_cols=99 Identities=22% Similarity=0.366 Sum_probs=73.5
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCC--c--------cCCH-HHHHHHHHHHHhCCCEEEeCCeeeE
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA--R--------LFTP-KIASYYEEYYKSKGVKFVKGTVLSS 106 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~--~--------~~d~-~~~~~~~~~l~~~GV~v~~~~~v~~ 106 (356)
.+.+++|||||+.|+.+|..|+++| +|+++++.+.+.. . .++. ++.....+.+++.||+++.++.++.
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~~ 85 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKL 85 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEEE
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEEE
Confidence 5789999999999999999999999 9999999875321 0 0111 1112234567788999999999999
Q ss_pred EEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCch
Q 018416 107 FDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 107 i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 142 (356)
++. +.. .|. .+|+++++|.+|+|+|.+|+..
T Consensus 86 id~--~~~--~V~-~~g~~~~~d~lViATGs~p~~p 116 (367)
T 1xhc_A 86 IDR--GRK--VVI-TEKGEVPYDTLVLATGARAREP 116 (367)
T ss_dssp EET--TTT--EEE-ESSCEEECSEEEECCCEEECCC
T ss_pred EEC--CCC--EEE-ECCcEEECCEEEECCCCCCCCC
Confidence 875 232 244 5778999999999999888653
No 133
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.70 E-value=1.8e-07 Score=87.25 Aligned_cols=98 Identities=11% Similarity=0.083 Sum_probs=72.2
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc-------------------cCCHHHHHHHHHHHH--------
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR-------------------LFTPKIASYYEEYYK-------- 92 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~-------------------~~d~~~~~~~~~~l~-------- 92 (356)
.+|+|||||++|+.+|..|++.|.+|+|+|+.+.+..+ ..++++.+.+.+...
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWT 82 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEEC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeecc
Confidence 57999999999999999999999999999998643110 012333333322211
Q ss_pred ----------------------------------hCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEe-cCeEEEecCC
Q 018416 93 ----------------------------------SKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLP-TDMVVVGIGI 137 (356)
Q Consensus 93 ----------------------------------~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~-~D~vi~a~G~ 137 (356)
..|++++++++|++++.++++ ..+++.+|+.+. +|.||.|+|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~i~~~~~v~~i~~~~~~--~~v~~~~g~~~~~a~~vV~a~g~ 160 (336)
T 1yvv_A 83 PLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRGDMPVSFSCRITEVFRGEEH--WNLLDAEGQNHGPFSHVIIATPA 160 (336)
T ss_dssp CCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHHTTCCEECSCCEEEEEECSSC--EEEEETTSCEEEEESEEEECSCH
T ss_pred ccceeccCcccccCCCCCccEEcCccHHHHHHHHHccCcEEecCEEEEEEEeCCE--EEEEeCCCcCccccCEEEEcCCH
Confidence 138999999999999875444 357788888764 9999999995
Q ss_pred CC
Q 018416 138 RP 139 (356)
Q Consensus 138 ~p 139 (356)
..
T Consensus 161 ~~ 162 (336)
T 1yvv_A 161 PQ 162 (336)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 134
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.70 E-value=6.7e-08 Score=89.56 Aligned_cols=98 Identities=12% Similarity=0.196 Sum_probs=76.2
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc-----------cCCc----cCCHHHHHHHHHHHHhCCCEEEeCCee
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH-----------CMAR----LFTPKIASYYEEYYKSKGVKFVKGTVL 104 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~-----------~l~~----~~d~~~~~~~~~~l~~~GV~v~~~~~v 104 (356)
.+++|||+|+.|+.+|..|++.|.+|+++++... ..+. ...+++.+.+.+.+++.|++++.++ +
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v 84 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH-I 84 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC-E
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee-e
Confidence 5799999999999999999999999999996420 0111 1235777888888899999999886 8
Q ss_pred eEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCc
Q 018416 105 SSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 105 ~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 141 (356)
+.++.. ++.+ .+ +.+++++.+|.+++|+|.+|..
T Consensus 85 ~~i~~~-~~~~-~v-~~~~~~~~~~~lv~AtG~~~~~ 118 (320)
T 1trb_A 85 NKVDLQ-NRPF-RL-NGDNGEYTCDALIIATGASARY 118 (320)
T ss_dssp EEEECS-SSSE-EE-EESSCEEEEEEEEECCCEEECC
T ss_pred eEEEec-CCEE-EE-EeCCCEEEcCEEEECCCCCcCC
Confidence 888753 3332 34 5678899999999999987754
No 135
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.69 E-value=2.5e-08 Score=96.39 Aligned_cols=97 Identities=19% Similarity=0.374 Sum_probs=74.8
Q ss_pred CcEEEECCchHHHHHHHHHHHCCC--cEEEEeeCCccC------C-ccC-----CHHHHHHHHHHHHhCCCEEEeCCeee
Q 018416 40 GNAVVIGGGYIGMECAASLVINKI--NVTMVFPEAHCM------A-RLF-----TPKIASYYEEYYKSKGVKFVKGTVLS 105 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~--~Vtlv~~~~~~l------~-~~~-----d~~~~~~~~~~l~~~GV~v~~~~~v~ 105 (356)
++++|||+|+.|+.+|..|++.|. +||++++.+.+. + ..+ ..++.....+.+++.+|+++. ++++
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~~v~ 80 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-DRMV 80 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-CCEE
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-EEEE
Confidence 689999999999999999999998 899999987421 1 000 111222345667889999999 9999
Q ss_pred EEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCc
Q 018416 106 SFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 106 ~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 141 (356)
+++. +.+ .+.+.+|+++.+|.+++|+|.+|..
T Consensus 81 ~id~--~~~--~v~~~~g~~~~~d~lvlAtG~~p~~ 112 (404)
T 3fg2_P 81 SIDR--EGR--KLLLASGTAIEYGHLVLATGARNRM 112 (404)
T ss_dssp EEET--TTT--EEEESSSCEEECSEEEECCCEEECC
T ss_pred EEEC--CCC--EEEECCCCEEECCEEEEeeCCCccC
Confidence 9975 232 4677899999999999999987654
No 136
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.69 E-value=4.8e-08 Score=90.05 Aligned_cols=99 Identities=13% Similarity=0.119 Sum_probs=75.0
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEE-EeeCCcc------------CCc----cCCHHHHHHHHHHHHhCCCEEEeC
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTM-VFPEAHC------------MAR----LFTPKIASYYEEYYKSKGVKFVKG 101 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtl-v~~~~~~------------l~~----~~d~~~~~~~~~~l~~~GV~v~~~ 101 (356)
.++|+|||+|+.|+.+|..|++.|.+|++ +++. .+ .+. ....++...+.+.+++.|++++.+
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 82 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG-MPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMV 82 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-STTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEECC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC-CCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEEE
Confidence 46899999999999999999999999999 9973 22 111 012578888889999999999988
Q ss_pred CeeeEEEEcCC-CcEEEE-EeCCCcEEecCeEEEecCCCCCch
Q 018416 102 TVLSSFDVDSN-GKVVAV-NLRDGNRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 102 ~~v~~i~~~~~-g~v~~v-~~~~g~~i~~D~vi~a~G~~p~~~ 142 (356)
+++++ .+++ +.. .+ ...++ ++.+|.+++|+|.+|+..
T Consensus 83 -~v~~i-~~~~~~~~-~v~~~~~~-~~~~d~lvlAtG~~~~~~ 121 (315)
T 3r9u_A 83 -GVEQI-LKNSDGSF-TIKLEGGK-TELAKAVIVCTGSAPKKA 121 (315)
T ss_dssp -CEEEE-EECTTSCE-EEEETTSC-EEEEEEEEECCCEEECCC
T ss_pred -EEEEE-ecCCCCcE-EEEEecCC-EEEeCEEEEeeCCCCCCC
Confidence 78888 4331 322 32 22344 899999999999877653
No 137
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.68 E-value=6.3e-08 Score=93.75 Aligned_cols=99 Identities=21% Similarity=0.416 Sum_probs=75.7
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCc--EEEEeeCCccCCc--cCCHHHH---------HHHHHHHHhCCCEEEeCCeeeE
Q 018416 40 GNAVVIGGGYIGMECAASLVINKIN--VTMVFPEAHCMAR--LFTPKIA---------SYYEEYYKSKGVKFVKGTVLSS 106 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~--Vtlv~~~~~~l~~--~~d~~~~---------~~~~~~l~~~GV~v~~~~~v~~ 106 (356)
++++|||+|+.|+.+|..|+++|.+ |+++++.+.+.-. .+..... ....+.+++.||+++++++++.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 82 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVTA 82 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEEE
Confidence 5899999999999999999999987 9999998763210 0111111 1123457788999999999999
Q ss_pred EEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCch
Q 018416 107 FDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 107 i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 142 (356)
++. +.+ .+.+.+|+++.+|.+++|+|.+|...
T Consensus 83 id~--~~~--~v~~~~g~~~~~d~lvlAtG~~p~~~ 114 (410)
T 3ef6_A 83 LDV--QTR--TISLDDGTTLSADAIVIATGSRARTM 114 (410)
T ss_dssp EET--TTT--EEEETTSCEEECSEEEECCCEEECCC
T ss_pred EEC--CCC--EEEECCCCEEECCEEEEccCCcccCC
Confidence 975 222 46778999999999999999887643
No 138
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.68 E-value=7.3e-09 Score=100.95 Aligned_cols=98 Identities=19% Similarity=0.265 Sum_probs=74.7
Q ss_pred CcEEEECCchHHHHHHHHHHH--CCCcEEEEeeCCccCCccC----------CHHHHHHHHHHHHhCCCEEEeCCeeeEE
Q 018416 40 GNAVVIGGGYIGMECAASLVI--NKINVTMVFPEAHCMARLF----------TPKIASYYEEYYKSKGVKFVKGTVLSSF 107 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~--~G~~Vtlv~~~~~~l~~~~----------d~~~~~~~~~~l~~~GV~v~~~~~v~~i 107 (356)
++|+|||||+.|+++|..|++ .|.+|||+++.+.+..... ..++...+.+.+++.||+++.+ .++.+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~i 81 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEE-EEEEE
Confidence 689999999999999999999 7899999999987532100 1112222345566789999974 88888
Q ss_pred EEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCch
Q 018416 108 DVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 108 ~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 142 (356)
+. +.. .+.+.+++++.+|.+|+|+|.+|+..
T Consensus 82 d~--~~~--~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 82 DP--DAN--TVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp ET--TTT--EEEETTCCEEECSEEEECCCCEEECC
T ss_pred EC--CCC--EEEECCCcEEECCEEEEcCCcccccC
Confidence 75 222 46778888999999999999987654
No 139
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.68 E-value=7.1e-08 Score=94.41 Aligned_cols=102 Identities=20% Similarity=0.198 Sum_probs=76.5
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCC--cEEEEeeCCccCCcc-------------------------------------
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKI--NVTMVFPEAHCMARL------------------------------------- 78 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~--~Vtlv~~~~~~l~~~------------------------------------- 78 (356)
..++|+|||||+.|+.+|..|++.|. +|+++++.+.+....
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 35789999999999999999999999 999999875431000
Q ss_pred --------------C--------------CHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCC---Cc---
Q 018416 79 --------------F--------------TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD---GN--- 124 (356)
Q Consensus 79 --------------~--------------d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~---g~--- 124 (356)
+ ..++.+.+.+..++.++.++++++|++++..+ +. ..|++.+ |+
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~-~~-~~V~~~~~~~G~~~~ 162 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKD-GS-WVVTYKGTKAGSPIS 162 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEET-TE-EEEEEEESSTTCCEE
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCC-Ce-EEEEEeecCCCCeeE
Confidence 0 12455666676777788899999999998743 32 2344444 66
Q ss_pred EEecCeEEEecCC--CCCc
Q 018416 125 RLPTDMVVVGIGI--RPNT 141 (356)
Q Consensus 125 ~i~~D~vi~a~G~--~p~~ 141 (356)
++.+|.||+|+|. .|+.
T Consensus 163 ~~~~d~VVvAtG~~s~p~~ 181 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPYI 181 (447)
T ss_dssp EEEESEEEECCCSSSSBCB
T ss_pred EEEeCEEEECCCCCCCCCC
Confidence 7999999999998 6654
No 140
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.68 E-value=7e-08 Score=93.15 Aligned_cols=100 Identities=15% Similarity=0.182 Sum_probs=79.0
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC--------Cc----------------------------------
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM--------AR---------------------------------- 77 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l--------~~---------------------------------- 77 (356)
.+|+|||||++|+-+|..|++.|.+|+|+|+.+..- +.
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEIA 85 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCeeE
Confidence 479999999999999999999999999999975210 00
Q ss_pred ----------------cCC-HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCc--EEecCeEEEecCCC
Q 018416 78 ----------------LFT-PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGN--RLPTDMVVVGIGIR 138 (356)
Q Consensus 78 ----------------~~d-~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~--~i~~D~vi~a~G~~ 138 (356)
.++ ..+...+.+.+++.|++++.+++|++++.++++....+.+.+|+ ++.+|.||.|+|..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~ 165 (421)
T 3nix_A 86 DFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYG 165 (421)
T ss_dssp EEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGG
T ss_pred EEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCc
Confidence 001 24456667777778999999999999987555555567778887 79999999999977
Q ss_pred C
Q 018416 139 P 139 (356)
Q Consensus 139 p 139 (356)
+
T Consensus 166 s 166 (421)
T 3nix_A 166 R 166 (421)
T ss_dssp C
T ss_pred h
Confidence 6
No 141
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.68 E-value=9.8e-08 Score=88.66 Aligned_cols=99 Identities=11% Similarity=0.176 Sum_probs=76.0
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc-----------cCCc---cCCHHHHHHHHHHHHhCCCEEEeCCee
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH-----------CMAR---LFTPKIASYYEEYYKSKGVKFVKGTVL 104 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~-----------~l~~---~~d~~~~~~~~~~l~~~GV~v~~~~~v 104 (356)
..+++|||+|+.|+.+|..|++.|.+|+++++... -.+. ....++.+.+.+.+++.|++++. .++
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v 94 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG-VEV 94 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET-CCE
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE-eeE
Confidence 35799999999999999999999999999998521 0111 11256777788888899999988 688
Q ss_pred eEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCc
Q 018416 105 SSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 105 ~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 141 (356)
++++..+ +. ..+.+ ++.++.+|.+|+|+|.+|..
T Consensus 95 ~~i~~~~-~~-~~v~~-~~~~~~~~~li~AtG~~~~~ 128 (319)
T 3cty_A 95 RSIKKTQ-GG-FDIET-NDDTYHAKYVIITTGTTHKH 128 (319)
T ss_dssp EEEEEET-TE-EEEEE-SSSEEEEEEEEECCCEEECC
T ss_pred EEEEEeC-CE-EEEEE-CCCEEEeCEEEECCCCCccc
Confidence 8887532 32 23555 66789999999999987654
No 142
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.67 E-value=7.7e-08 Score=90.14 Aligned_cols=99 Identities=14% Similarity=0.164 Sum_probs=77.0
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc---c--------CCcc----CCHHHHHHHHHHHHhCCCEEEeCCe
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH---C--------MARL----FTPKIASYYEEYYKSKGVKFVKGTV 103 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~---~--------l~~~----~d~~~~~~~~~~l~~~GV~v~~~~~ 103 (356)
..+++|||+|+.|+.+|..|++.|.+|+++++... + .+.+ ..+++.+.+.+.+++.|++++.++
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~- 92 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRMED- 92 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECCC-
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEee-
Confidence 46899999999999999999999999999996411 0 1111 125677788888889999999987
Q ss_pred eeEEEEcCCCcEEEE-EeCCCcEEecCeEEEecCCCCCc
Q 018416 104 LSSFDVDSNGKVVAV-NLRDGNRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 104 v~~i~~~~~g~v~~v-~~~~g~~i~~D~vi~a~G~~p~~ 141 (356)
+++++. ++. ..+ .+.+|+++.+|.+|+|+|.+|..
T Consensus 93 v~~i~~-~~~--~~v~~~~~g~~~~~d~lviAtG~~~~~ 128 (335)
T 2a87_A 93 VESVSL-HGP--LKSVVTADGQTHRARAVILAMGAAARY 128 (335)
T ss_dssp EEEEEC-SSS--SEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEEEe-CCc--EEEEEeCCCCEEEeCEEEECCCCCccC
Confidence 888865 222 234 67788899999999999987754
No 143
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.67 E-value=9.9e-08 Score=88.18 Aligned_cols=99 Identities=14% Similarity=0.178 Sum_probs=75.5
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc----c----C--------Cc----cCCHHHHHHHHHHHHhCCCEEE
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH----C----M--------AR----LFTPKIASYYEEYYKSKGVKFV 99 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~----~----l--------~~----~~d~~~~~~~~~~l~~~GV~v~ 99 (356)
..|+|||+|+.|+.+|..|+++|.+|+++++.+. + . +. ...+++.+.+.+.+++.++++.
T Consensus 5 yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~~ 84 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTII 84 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcEEE
Confidence 4699999999999999999999999999998642 0 0 11 1125778888888999999988
Q ss_pred eCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCc
Q 018416 100 KGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 100 ~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 141 (356)
... +.......+. ..+.+.++.++.+|.+|+|+|.+|..
T Consensus 85 ~~~-v~~~~~~~~~--~~~~~~~~~~~~~~~liiATG~~~~~ 123 (314)
T 4a5l_A 85 TET-IDHVDFSTQP--FKLFTEEGKEVLTKSVIIATGATAKR 123 (314)
T ss_dssp CCC-EEEEECSSSS--EEEEETTCCEEEEEEEEECCCEEECC
T ss_pred EeE-EEEeecCCCc--eEEEECCCeEEEEeEEEEcccccccc
Confidence 654 4454432222 45667888999999999999987754
No 144
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.66 E-value=5e-08 Score=95.15 Aligned_cols=100 Identities=23% Similarity=0.360 Sum_probs=76.0
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCC--cEEEEeeCCccCC------c-cCC-----HHHHHHHHHHHHhCCCEEEeCCee
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKI--NVTMVFPEAHCMA------R-LFT-----PKIASYYEEYYKSKGVKFVKGTVL 104 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~--~Vtlv~~~~~~l~------~-~~d-----~~~~~~~~~~l~~~GV~v~~~~~v 104 (356)
.++++|||+|+.|+.+|..|+++|. +|+++++.+.+.- . ++. .++.....+.+++.||+++.++.+
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 83 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQV 83 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCE
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEE
Confidence 4689999999999999999999998 7999998765310 0 010 111111245678899999999999
Q ss_pred eEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCch
Q 018416 105 SSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 105 ~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 142 (356)
+.++. ++. .+.+.+|+++.+|.+|+|+|.+|+..
T Consensus 84 ~~i~~-~~~---~v~~~~g~~~~~d~lviAtG~~p~~~ 117 (431)
T 1q1r_A 84 TAINR-DRQ---QVILSDGRALDYDRLVLATGGRPRPL 117 (431)
T ss_dssp EEEET-TTT---EEEETTSCEEECSEEEECCCEEECCC
T ss_pred EEEEC-CCC---EEEECCCCEEECCEEEEcCCCCccCC
Confidence 99975 222 46678888999999999999988754
No 145
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.65 E-value=4.6e-08 Score=95.95 Aligned_cols=101 Identities=15% Similarity=0.250 Sum_probs=74.1
Q ss_pred CcEEEECCchHHHHHHHHHHHC--CCcEEEEeeCCccC--C----ccCCH------HHHHHHHHHHHhCCCEEEeCCeee
Q 018416 40 GNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCM--A----RLFTP------KIASYYEEYYKSKGVKFVKGTVLS 105 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~--G~~Vtlv~~~~~~l--~----~~~d~------~~~~~~~~~l~~~GV~v~~~~~v~ 105 (356)
++++|||||+.|+.+|..|+++ |.+|+++++.+.+. + ..+.. ++.....+.+++.|++++++++++
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 5899999999999999999998 89999999988643 1 10111 111114567788999999999999
Q ss_pred EEEEcCCCcEEEEE-eCCCcEEecCeEEEecCCCCCch
Q 018416 106 SFDVDSNGKVVAVN-LRDGNRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 106 ~i~~~~~g~v~~v~-~~~g~~i~~D~vi~a~G~~p~~~ 142 (356)
+++. ++.. ..+. ..+++++.+|.+++|+|.+|...
T Consensus 83 ~id~-~~~~-v~v~~~~~~~~~~~d~lviAtG~~p~~p 118 (452)
T 3oc4_A 83 AMDV-ENQL-IAWTRKEEQQWYSYDKLILATGASQFST 118 (452)
T ss_dssp EEET-TTTE-EEEEETTEEEEEECSEEEECCCCCBCCC
T ss_pred EEEC-CCCE-EEEEecCceEEEEcCEEEECCCcccCCC
Confidence 9975 3332 2333 23557899999999999988653
No 146
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.64 E-value=2.1e-07 Score=93.97 Aligned_cols=105 Identities=16% Similarity=0.144 Sum_probs=80.2
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCcc--------------------------------------C--
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARL--------------------------------------F-- 79 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~--------------------------------------~-- 79 (356)
.+|+|||+|..|+.+|..|++.|.+|+|+++.+.+.... .
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~~ 206 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNINDP 206 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 579999999999999999999999999999976542100 0
Q ss_pred -----------------------------------------------CHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCC
Q 018416 80 -----------------------------------------------TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSN 112 (356)
Q Consensus 80 -----------------------------------------------d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~ 112 (356)
...+...+.+.+++.||+++++++++++..+++
T Consensus 207 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~ 286 (571)
T 1y0p_A 207 ALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDK 286 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECTT
T ss_pred HHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCC
Confidence 123445666777889999999999999987444
Q ss_pred CcEEEEEeC--CCc--EEecCeEEEecCCCC-Cchhh
Q 018416 113 GKVVAVNLR--DGN--RLPTDMVVVGIGIRP-NTSLF 144 (356)
Q Consensus 113 g~v~~v~~~--~g~--~i~~D~vi~a~G~~p-~~~l~ 144 (356)
+++..+.+. +|+ ++.+|.||+|+|... |.++.
T Consensus 287 g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n~~~~ 323 (571)
T 1y0p_A 287 GTVKGILVKGMYKGYYWVKADAVILATGGFAKNNERV 323 (571)
T ss_dssp SCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHH
T ss_pred CeEEEEEEEeCCCcEEEEECCeEEEeCCCcccCHHHH
Confidence 777666554 675 689999999999654 44443
No 147
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.63 E-value=4.9e-08 Score=98.95 Aligned_cols=103 Identities=15% Similarity=0.158 Sum_probs=76.4
Q ss_pred CCCcEEEECCchHHHHHHHHHHHC--CCcEEEEeeCCccC----------CccC-C--HHHHHHHHHHHHhCCCEEEeCC
Q 018416 38 SGGNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCM----------ARLF-T--PKIASYYEEYYKSKGVKFVKGT 102 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~--G~~Vtlv~~~~~~l----------~~~~-d--~~~~~~~~~~l~~~GV~v~~~~ 102 (356)
..++|+|||||+.|+.+|..|+++ |.+|+++++.+.+. ...+ + ..+...+....++.|+++++++
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~ 114 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLS 114 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSE
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEECC
Confidence 457899999999999999999998 89999999998741 1001 1 1123345566678899999999
Q ss_pred eeeEEEEcCCCcEEEEE-eCCCc--EEecCeEEEecCCCCCch
Q 018416 103 VLSSFDVDSNGKVVAVN-LRDGN--RLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 103 ~v~~i~~~~~g~v~~v~-~~~g~--~i~~D~vi~a~G~~p~~~ 142 (356)
.+++++. +++.+ .+. +.+|+ ++.+|.+|+|+|.+|...
T Consensus 115 ~V~~id~-~~~~v-~v~~~~~g~~~~~~~d~lviAtG~~p~~p 155 (588)
T 3ics_A 115 EVVKINK-EEKTI-TIKNVTTNETYNEAYDVLILSPGAKPIVP 155 (588)
T ss_dssp EEEEEET-TTTEE-EEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEEEC-CCCEE-EEeecCCCCEEEEeCCEEEECCCCCCCCC
Confidence 9999975 33433 333 24566 789999999999877643
No 148
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.63 E-value=5.1e-08 Score=94.47 Aligned_cols=100 Identities=21% Similarity=0.326 Sum_probs=77.4
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCc--EEEEeeCCccC------C-ccC-----CHHHHHHHHHHHHhCCCEEEeCCee
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKIN--VTMVFPEAHCM------A-RLF-----TPKIASYYEEYYKSKGVKFVKGTVL 104 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~--Vtlv~~~~~~l------~-~~~-----d~~~~~~~~~~l~~~GV~v~~~~~v 104 (356)
.++++|||+|+.|+.+|..|++.|.+ |+++++.+.+. . ..+ ..++.....+.+++.||+++.++++
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v 88 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAEV 88 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETCCE
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCCEE
Confidence 46899999999999999999999987 99999986531 1 111 1122223356778899999999999
Q ss_pred eEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCch
Q 018416 105 SSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 105 ~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 142 (356)
+.++. +.+ .+.+.+|+++.+|.+++|+|.+|...
T Consensus 89 ~~id~--~~~--~v~~~~g~~~~~d~lvlAtG~~~~~~ 122 (415)
T 3lxd_A 89 VSLDP--AAH--TVKLGDGSAIEYGKLIWATGGDPRRL 122 (415)
T ss_dssp EEEET--TTT--EEEETTSCEEEEEEEEECCCEECCCC
T ss_pred EEEEC--CCC--EEEECCCCEEEeeEEEEccCCccCCC
Confidence 99975 232 46778899999999999999887654
No 149
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.62 E-value=1.9e-07 Score=89.37 Aligned_cols=101 Identities=18% Similarity=0.178 Sum_probs=77.3
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCcc------CCcc-----------------------------------
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHC------MARL----------------------------------- 78 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~------l~~~----------------------------------- 78 (356)
.+|+|||||+.|+.+|..|++.|.+|+|+|+.+.. -...
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 47999999999999999999999999999988641 0000
Q ss_pred -----------------CC-HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEe-CCCc--EEecCeEEEecCC
Q 018416 79 -----------------FT-PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNL-RDGN--RLPTDMVVVGIGI 137 (356)
Q Consensus 79 -----------------~d-~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~-~~g~--~i~~D~vi~a~G~ 137 (356)
++ .++.+.+.+.+.+.|++++.++++++++.++++.+ .+++ .+|+ ++.+|+||.|.|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~AdG~ 161 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGCDGF 161 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEECCCT
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEECCCC
Confidence 01 33455666777778999999999999986333333 4565 6787 7999999999998
Q ss_pred CCCc
Q 018416 138 RPNT 141 (356)
Q Consensus 138 ~p~~ 141 (356)
.+..
T Consensus 162 ~S~v 165 (394)
T 1k0i_A 162 HGIS 165 (394)
T ss_dssp TCST
T ss_pred CcHH
Confidence 7664
No 150
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.60 E-value=8.1e-08 Score=94.64 Aligned_cols=102 Identities=23% Similarity=0.278 Sum_probs=64.2
Q ss_pred CCcEEEECCchHHHHHHHHHHHC--CCcEEEEeeCCcc------CCccCC------HHH-------HHHHHHHHHhCCCE
Q 018416 39 GGNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHC------MARLFT------PKI-------ASYYEEYYKSKGVK 97 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~--G~~Vtlv~~~~~~------l~~~~d------~~~-------~~~~~~~l~~~GV~ 97 (356)
.++|+|||||+.|+.+|..|+++ |.+|+|+++.+.+ ++..+. .++ ........++.|++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 36899999999999999999998 9999999999874 121111 111 11222222358999
Q ss_pred EEeCCeeeEEEEcCCCcEEEEE-eCCCc--EEecCeEEEecCCCCCch
Q 018416 98 FVKGTVLSSFDVDSNGKVVAVN-LRDGN--RLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 98 v~~~~~v~~i~~~~~g~v~~v~-~~~g~--~i~~D~vi~a~G~~p~~~ 142 (356)
+++++++++++. ++..+ .+. +.+|+ ++.+|.+++|+|.+|...
T Consensus 83 ~~~~~~V~~id~-~~~~v-~~~~~~~g~~~~~~~d~lviAtG~~p~~p 128 (472)
T 3iwa_A 83 ALVETRAHAIDR-AAHTV-EIENLRTGERRTLKYDKLVLALGSKANRP 128 (472)
T ss_dssp EECSEEEEEEET-TTTEE-EEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEECCEEEEEEC-CCCEE-EEeecCCCCEEEEECCEEEEeCCCCcCCC
Confidence 999999999975 33333 333 23465 799999999999877643
No 151
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.60 E-value=2.8e-07 Score=86.77 Aligned_cols=56 Identities=18% Similarity=0.263 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCC--cEEecCeEEEecCCCC
Q 018416 83 IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG--NRLPTDMVVVGIGIRP 139 (356)
Q Consensus 83 ~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g--~~i~~D~vi~a~G~~p 139 (356)
+.+.+.+.++++|++++++++|++++.++++.+ .+.+.+| .++.+|.||+|+|...
T Consensus 152 ~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 152 LMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGF-ELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECTTSSE-EEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHCCCEEECCCEEEEEEEcCCceE-EEEECCCceeEEEeCEEEECCCcch
Confidence 344566777889999999999999987444433 4777777 4799999999999763
No 152
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.58 E-value=1.8e-07 Score=87.79 Aligned_cols=164 Identities=16% Similarity=0.174 Sum_probs=103.4
Q ss_pred CcEEEECCchHHHHHHHHHHHC--CCcEEEEeeCCccCCcc-------------------------------------CC
Q 018416 40 GNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCMARL-------------------------------------FT 80 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~--G~~Vtlv~~~~~~l~~~-------------------------------------~d 80 (356)
.+|+|||+|+.|+.+|..|++. |.+|+++++.+.+.... ..
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~~ 145 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHA 145 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcch
Confidence 4899999999999999999998 99999999976542100 02
Q ss_pred HHHHHHHHHHHHhC-CCEEEeCCeeeEEEEcC--C-C--cEEEEEeC--------------CCcEEec------------
Q 018416 81 PKIASYYEEYYKSK-GVKFVKGTVLSSFDVDS--N-G--KVVAVNLR--------------DGNRLPT------------ 128 (356)
Q Consensus 81 ~~~~~~~~~~l~~~-GV~v~~~~~v~~i~~~~--~-g--~v~~v~~~--------------~g~~i~~------------ 128 (356)
.++...+.+.+.+. ||+++.++.++++..++ + + ++..+.+. ++.++.+
T Consensus 146 ~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~ 225 (326)
T 2gjc_A 146 ALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLS 225 (326)
T ss_dssp HHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSS
T ss_pred HHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeecccccccccc
Confidence 34455566666664 99999999999997643 3 4 67666542 3457999
Q ss_pred ---CeEEEecCCCCCc-hhhhccc-cc-ccC------c--------EEEecccc-cCCCCEEEEccccccCccccCcccc
Q 018416 129 ---DMVVVGIGIRPNT-SLFEGQL-TL-EKG------G--------IKVTGRLQ-SSNSSVYAVGDVAAFPLKLLGETRR 187 (356)
Q Consensus 129 ---D~vi~a~G~~p~~-~l~~~~l-~~-~~g------~--------I~vd~~l~-ts~~~VyAiGD~~~~~~~~~g~~~~ 187 (356)
|.||.|+|..... .+....+ .. ..+ . .+|+..-. +-+|++|++|-.+..-. |.++.
T Consensus 226 ~~~~~VV~ATG~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~r~ 302 (326)
T 2gjc_A 226 QKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELD---GLNRM 302 (326)
T ss_dssp TTCCEEEECCCCC--CCSHHHHHHHHHHSSCCCCCCCCBCHHHHHHHHHHHCEECTTSTTEEECTHHHHHHH---TCCBC
T ss_pred ccCCEEEECcCCCchHHHHHHhhccccccccccCceeccccccchhheeecCCCccccCCEEECChHHHHhc---CCCCC
Confidence 9999999977543 2322211 00 000 0 11222222 15899999999875422 23332
Q ss_pred cccHHHHHHHHHHHHHHHc
Q 018416 188 LEHVDSARKSAKHAVAAIM 206 (356)
Q Consensus 188 ~~~~~~A~~~g~~aa~~i~ 206 (356)
=+.-..-.-.|+.||+.|+
T Consensus 303 g~~fg~m~~sg~~~a~~~~ 321 (326)
T 2gjc_A 303 GPTFGAMALSGVHAAEQIL 321 (326)
T ss_dssp CSCCHHHHHHHHHHHHHHH
T ss_pred ChhhhhhhhhhHHHHHHHH
Confidence 2333334457788887765
No 153
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.58 E-value=2.5e-07 Score=87.99 Aligned_cols=56 Identities=18% Similarity=0.230 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCC
Q 018416 82 KIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPN 140 (356)
Q Consensus 82 ~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~ 140 (356)
.+.+.+.+.+++.|++++.+++|++++.+ ++.+ .+.+.+| ++.+|.||+|+|....
T Consensus 165 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~-~v~~~~g-~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 165 FVCKAYVKAAKMLGAEIFEHTPVLHVERD-GEAL-FIKTPSG-DVWANHVVVASGVWSG 220 (382)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCCCEEECS-SSSE-EEEETTE-EEEEEEEEECCGGGTH
T ss_pred HHHHHHHHHHHHCCCEEEcCCcEEEEEEE-CCEE-EEEcCCc-eEEcCEEEECCChhHH
Confidence 45566777888899999999999999863 4444 6777776 8999999999998643
No 154
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.58 E-value=3.6e-07 Score=84.62 Aligned_cols=98 Identities=18% Similarity=0.196 Sum_probs=74.9
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc---cC--------Cc---cCCHHHHHHHHHHHHhCCCEEEeCCeeeE
Q 018416 41 NAVVIGGGYIGMECAASLVINKINVTMVFPEAH---CM--------AR---LFTPKIASYYEEYYKSKGVKFVKGTVLSS 106 (356)
Q Consensus 41 ~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~---~l--------~~---~~d~~~~~~~~~~l~~~GV~v~~~~~v~~ 106 (356)
.|+|||+|+.|+.+|..|+++|.+|+|+++... ++ +. ...+++.......+.+.++.+..+.....
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSV 87 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCCCEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceeeeee
Confidence 689999999999999999999999999997531 11 11 12367777778888888999888877666
Q ss_pred EEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCch
Q 018416 107 FDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 107 i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 142 (356)
... ... .....+++++.+|.+|+|+|.+|...
T Consensus 88 ~~~-~~~---~~~~~~~~~~~~d~liiAtGs~~~~~ 119 (312)
T 4gcm_A 88 EDK-GEY---KVINFGNKELTAKAVIIATGAEYKKI 119 (312)
T ss_dssp EEC-SSC---EEEECSSCEEEEEEEEECCCEEECCC
T ss_pred eee-ecc---eeeccCCeEEEeceeEEcccCccCcC
Confidence 543 222 34456788999999999999887653
No 155
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.58 E-value=1.3e-07 Score=92.47 Aligned_cols=100 Identities=22% Similarity=0.308 Sum_probs=71.1
Q ss_pred CCcEEEECCchHHHHHHHHHHHC--CCcEEEEeeCCccC------CccC-----CHHHHHHHHHHH-HhCCCEEEeCCee
Q 018416 39 GGNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCM------ARLF-----TPKIASYYEEYY-KSKGVKFVKGTVL 104 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~--G~~Vtlv~~~~~~l------~~~~-----d~~~~~~~~~~l-~~~GV~v~~~~~v 104 (356)
.++++|||||+.|+.+|..|++. |.+|+++++.+.+. +..+ ..++.....+.+ ++.||++++++++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v 82 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEV 82 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEE
Confidence 47899999999999999999998 88999999987542 1111 111222222334 6789999999999
Q ss_pred eEEEEcCCCcEEEEEeCCC-cEEecCeEEEecCCCCCch
Q 018416 105 SSFDVDSNGKVVAVNLRDG-NRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 105 ~~i~~~~~g~v~~v~~~~g-~~i~~D~vi~a~G~~p~~~ 142 (356)
++++. +. ..+.+.++ .++.+|.+++|+|.+|...
T Consensus 83 ~~i~~--~~--~~v~~~~g~~~~~~d~lviAtG~~p~~p 117 (449)
T 3kd9_A 83 IEVDT--GY--VRVRENGGEKSYEWDYLVFANGASPQVP 117 (449)
T ss_dssp EEECS--SE--EEEECSSSEEEEECSEEEECCCEEECCC
T ss_pred EEEec--CC--CEEEECCceEEEEcCEEEECCCCCCCCC
Confidence 99853 22 34566666 4799999999999887643
No 156
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.57 E-value=3.3e-07 Score=87.69 Aligned_cols=55 Identities=16% Similarity=0.216 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCC
Q 018416 83 IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRP 139 (356)
Q Consensus 83 ~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p 139 (356)
+...+.+.+++.|++++.+++|+++.. +++.+..+++.+| ++.+|.||+|+|...
T Consensus 176 ~~~~l~~~~~~~g~~i~~~~~v~~i~~-~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 176 VAWAFARKANEMGVDIIQNCEVTGFIK-DGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHCCCEEEcCCeEEEEEE-eCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 444566777889999999999999987 4566667777777 799999999999764
No 157
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.57 E-value=1.2e-07 Score=92.86 Aligned_cols=102 Identities=16% Similarity=0.127 Sum_probs=76.3
Q ss_pred cEEEECCchHHHHHHHHHHHCC-----CcEEEEeeCCccCCc--------------------------------------
Q 018416 41 NAVVIGGGYIGMECAASLVINK-----INVTMVFPEAHCMAR-------------------------------------- 77 (356)
Q Consensus 41 ~vvVvGgG~iGlE~A~~L~~~G-----~~Vtlv~~~~~~l~~-------------------------------------- 77 (356)
+|+|||+|+.|+.+|..|++.| .+|+++++.+.+.-.
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~~~ 111 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHKHD 111 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHHTT
T ss_pred CEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhhcC
Confidence 7999999999999999999999 999999998742100
Q ss_pred ----------c--CCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCC-CcE--EEEEeCCCc----EEecCeEEEecCCC
Q 018416 78 ----------L--FTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSN-GKV--VAVNLRDGN----RLPTDMVVVGIGIR 138 (356)
Q Consensus 78 ----------~--~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~-g~v--~~v~~~~g~----~i~~D~vi~a~G~~ 138 (356)
. ...++.+.+....++.+++++++++|++++.+++ +.. ..+.+.+|+ ++.+|.||+|+|.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~ 191 (463)
T 3s5w_A 112 RLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGT 191 (463)
T ss_dssp CHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCCE
T ss_pred ceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCCC
Confidence 0 0134455555666677999999999999976321 322 256666665 89999999999987
Q ss_pred CCch
Q 018416 139 PNTS 142 (356)
Q Consensus 139 p~~~ 142 (356)
|...
T Consensus 192 p~~p 195 (463)
T 3s5w_A 192 PRIP 195 (463)
T ss_dssp ECCC
T ss_pred CCCc
Confidence 7643
No 158
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.56 E-value=5.1e-07 Score=91.27 Aligned_cols=120 Identities=18% Similarity=0.164 Sum_probs=87.1
Q ss_pred HHHHHHHHHHhcC--CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCcc------------------------
Q 018416 25 ADANRLVNVMKSC--SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARL------------------------ 78 (356)
Q Consensus 25 ~da~~i~~~l~~~--~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~------------------------ 78 (356)
.|...++..+... ...+|+|||+|+.|+.+|..|++.|.+|+++++.+.+....
T Consensus 110 ~~~~~~~~~~~~~~~~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~ 189 (572)
T 1d4d_A 110 ADKAAQDKAIAAGVKETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKK 189 (572)
T ss_dssp SSHHHHHHHHHSCCCEECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCT
T ss_pred ccHHHHHHHhhccCCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCH
Confidence 4566676666531 23589999999999999999999999999999876432100
Q ss_pred --------------C-------------------------------------------------CHHHHHHHHHHHHhCC
Q 018416 79 --------------F-------------------------------------------------TPKIASYYEEYYKSKG 95 (356)
Q Consensus 79 --------------~-------------------------------------------------d~~~~~~~~~~l~~~G 95 (356)
. ...+...+.+.+++.|
T Consensus 190 ~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~g 269 (572)
T 1d4d_A 190 QIMIDDTMKGGRNINDPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRG 269 (572)
T ss_dssp HHHHHHHHHHTTTCSCHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcC
Confidence 0 1234455667778899
Q ss_pred CEEEeCCeeeEEEEcCCCcEEEEEeC--CCc--EEecCeEEEecCCCCC-chhh
Q 018416 96 VKFVKGTVLSSFDVDSNGKVVAVNLR--DGN--RLPTDMVVVGIGIRPN-TSLF 144 (356)
Q Consensus 96 V~v~~~~~v~~i~~~~~g~v~~v~~~--~g~--~i~~D~vi~a~G~~p~-~~l~ 144 (356)
|++++++.++++..++++++..+.+. +|+ ++.+|.||+|+|..++ .+++
T Consensus 270 v~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~ 323 (572)
T 1d4d_A 270 TDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKNNERV 323 (572)
T ss_dssp CEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHH
T ss_pred CeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccCHHHH
Confidence 99999999999976332777666654 564 6899999999997664 3444
No 159
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.56 E-value=3.7e-07 Score=92.85 Aligned_cols=99 Identities=15% Similarity=0.160 Sum_probs=77.6
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc-cC-----------------------Cc------------------
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH-CM-----------------------AR------------------ 77 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~-~l-----------------------~~------------------ 77 (356)
-.|+|||||+.|+++|..+++.|.+|+|+++.+. +. ..
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~~ 108 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNA 108 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhhc
Confidence 3799999999999999999999999999998631 10 00
Q ss_pred -----------cCC-HHHHHHHHHHHHh-CCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCC
Q 018416 78 -----------LFT-PKIASYYEEYYKS-KGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPN 140 (356)
Q Consensus 78 -----------~~d-~~~~~~~~~~l~~-~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~ 140 (356)
.+| ..+...+.+.+++ .|++++ ++.++++.. +++.+..|.+.+|.++.+|.||+|+|..+.
T Consensus 109 ~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~-e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 109 SKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIV-ENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEE-SSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred ccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEe-cCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 011 1345666777877 699995 678999976 466777888888989999999999998764
No 160
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.56 E-value=7.5e-07 Score=84.67 Aligned_cols=54 Identities=20% Similarity=0.282 Sum_probs=43.1
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCC
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRP 139 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p 139 (356)
...+.+.+++.|++++.+++|++++. +++.+..+++.+| ++.+|.||+|+|...
T Consensus 152 ~~~l~~~~~~~Gv~i~~~~~v~~i~~-~~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 152 TTAFAVKAKEYGAKLLEYTEVKGFLI-ENNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHCCCEEECCceEEEEEE-ECCEEEEEEECCc-EEECCEEEECcchhH
Confidence 34456677788999999999999987 3556655777777 899999999999764
No 161
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.55 E-value=3.2e-07 Score=87.53 Aligned_cols=99 Identities=16% Similarity=0.188 Sum_probs=76.8
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCC--------------------c----------------------
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA--------------------R---------------------- 77 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~--------------------~---------------------- 77 (356)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.. .
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPI 84 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEEE
Confidence 3799999999999999999999999999999863210 0
Q ss_pred cCC--------------HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEe---CCCcEEecCeEEEecCCCC
Q 018416 78 LFT--------------PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNL---RDGNRLPTDMVVVGIGIRP 139 (356)
Q Consensus 78 ~~d--------------~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~---~~g~~i~~D~vi~a~G~~p 139 (356)
.++ ..+.+.+.+.+++.|++++.+++|++++.+ ++.+..|.+ .++.++.+|.||.|.|..+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 85 ILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred EEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 011 124466677777889999999999999873 565554655 3556899999999999876
No 162
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.54 E-value=3.4e-07 Score=89.64 Aligned_cols=101 Identities=18% Similarity=0.204 Sum_probs=78.3
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCC--c----------------------------------------
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA--R---------------------------------------- 77 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~--~---------------------------------------- 77 (356)
.+|+|||||+.|+.+|..|++.|.+|+|+|+.+.+.. .
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQT 86 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCce
Confidence 4799999999999999999999999999998764210 0
Q ss_pred ---------cCC-HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeC---CCc--EEecCeEEEecCCCCCc
Q 018416 78 ---------LFT-PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR---DGN--RLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 78 ---------~~d-~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~---~g~--~i~~D~vi~a~G~~p~~ 141 (356)
.++ .++.+.+.+.+++.|++++.+++|+++.. +++.+..+++. +|+ ++.+|.||.|.|..+..
T Consensus 87 ~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~-~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~v 164 (453)
T 3atr_A 87 VWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIF-EDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSF 164 (453)
T ss_dssp EEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEE-ETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTT
T ss_pred EEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEE-ECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhh
Confidence 001 24566677777889999999999999986 35555445543 675 79999999999977654
No 163
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.54 E-value=5.1e-07 Score=90.63 Aligned_cols=98 Identities=16% Similarity=0.238 Sum_probs=75.7
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC--------Cc------------cCC----------------HHH
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM--------AR------------LFT----------------PKI 83 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l--------~~------------~~d----------------~~~ 83 (356)
.+|+|||+|+.|+.+|..|++.|.+|+++|+.+.+. +. .+. +++
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i 96 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEI 96 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHH
Confidence 479999999999999999999999999999976431 10 011 345
Q ss_pred HHHHHHHHHhCC--CEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCC
Q 018416 84 ASYYEEYYKSKG--VKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGI 137 (356)
Q Consensus 84 ~~~~~~~l~~~G--V~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~ 137 (356)
.+.+....++.+ ++++++++|++++.++++....|++.+|+++.+|.||+|+|.
T Consensus 97 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~ 152 (542)
T 1w4x_A 97 LRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQ 152 (542)
T ss_dssp HHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCC
Confidence 555666666655 678999999999865444344678888989999999999995
No 164
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.54 E-value=6.4e-07 Score=85.58 Aligned_cols=100 Identities=17% Similarity=0.165 Sum_probs=74.0
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc------cCCHHHH------------------------------
Q 018416 41 NAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR------LFTPKIA------------------------------ 84 (356)
Q Consensus 41 ~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~------~~d~~~~------------------------------ 84 (356)
+|+|||||+.|+-+|..|++.|++|+|+|+.+.+... .+.+...
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~~ 82 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFYN 82 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEec
Confidence 7999999999999999999999999999987654221 0112111
Q ss_pred -----------------------------HHHHHHHH-hCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEe
Q 018416 85 -----------------------------SYYEEYYK-SKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVG 134 (356)
Q Consensus 85 -----------------------------~~~~~~l~-~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a 134 (356)
..+.+.|. ..+.++++++++++++..+++.+ .+++.||+++++|+||-|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v-~v~~~dG~~~~adlvVgA 161 (412)
T 4hb9_A 83 ERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENGGI-KIFFADGSHENVDVLVGA 161 (412)
T ss_dssp TTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTSCE-EEEETTSCEEEESEEEEC
T ss_pred CCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCCeE-EEEECCCCEEEeeEEEEC
Confidence 11223332 23456888999999987666654 688999999999999999
Q ss_pred cCCCCCc
Q 018416 135 IGIRPNT 141 (356)
Q Consensus 135 ~G~~p~~ 141 (356)
-|.+...
T Consensus 162 DG~~S~v 168 (412)
T 4hb9_A 162 DGSNSKV 168 (412)
T ss_dssp CCTTCHH
T ss_pred CCCCcch
Confidence 9987643
No 165
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.54 E-value=7.9e-07 Score=90.18 Aligned_cols=100 Identities=24% Similarity=0.241 Sum_probs=78.1
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc-cC-----------------------Cc------------------
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH-CM-----------------------AR------------------ 77 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~-~l-----------------------~~------------------ 77 (356)
-.|+|||||..|+++|..+++.|.+|+|+++.+. +. ..
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~~ 107 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLNT 107 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeeccc
Confidence 4799999999999999999999999999998731 10 00
Q ss_pred -----------cCC-HHHHHHHHHHHHh-CCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCc
Q 018416 78 -----------LFT-PKIASYYEEYYKS-KGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 78 -----------~~d-~~~~~~~~~~l~~-~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 141 (356)
..| ..+...+.+.+++ .||+++ +..|+++.. +++.+..|.+.+|+++.+|.||+|+|..++.
T Consensus 108 ~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~-e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~ 182 (637)
T 2zxi_A 108 RKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIV-KNNQVVGVRTNLGVEYKTKAVVVTTGTFLNG 182 (637)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEE-SSSBEEEEEETTSCEEECSEEEECCTTCBTC
T ss_pred ccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEEccCCCccC
Confidence 001 1345566677777 599995 678999876 5677778889999999999999999987654
No 166
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.53 E-value=1.8e-07 Score=90.60 Aligned_cols=100 Identities=25% Similarity=0.343 Sum_probs=74.2
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCc--EEEEeeCCccCCc--cCCHHHH-HHH-H----HHHHhCCCEEEeCCeeeEEE
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKIN--VTMVFPEAHCMAR--LFTPKIA-SYY-E----EYYKSKGVKFVKGTVLSSFD 108 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~--Vtlv~~~~~~l~~--~~d~~~~-~~~-~----~~l~~~GV~v~~~~~v~~i~ 108 (356)
..+++|||+|+.|+.+|..|+++|.+ |+++++.+.+.-. .+...+. ... . +.+++.||+++.+++++.++
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~ 86 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKRAPEVEWLLGVTAQSFD 86 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCCGGGSBCCCTTSCSCEEEETCCEEEEE
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCchhhhhHHHHHHCCCEEEcCCEEEEEE
Confidence 46899999999999999999999984 9999998764210 0122111 100 0 03567899999999999997
Q ss_pred EcCCCcEEEEEeCCCcEEecCeEEEecCCCCCch
Q 018416 109 VDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 109 ~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 142 (356)
. ++. .+.+.+|+++++|.+|+|+|.+|...
T Consensus 87 ~--~~~--~v~~~~g~~~~~d~lviAtG~~~~~~ 116 (408)
T 2gqw_A 87 P--QAH--TVALSDGRTLPYGTLVLATGAAPRAL 116 (408)
T ss_dssp T--TTT--EEEETTSCEEECSEEEECCCEEECCC
T ss_pred C--CCC--EEEECCCCEEECCEEEECCCCCCCCC
Confidence 5 222 46678888999999999999888654
No 167
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.52 E-value=1.1e-07 Score=95.78 Aligned_cols=101 Identities=18% Similarity=0.143 Sum_probs=71.8
Q ss_pred CcEEEECCchHHHHHHHHHHHC--CCcEEEEeeCCccCCc------c----C-CH--HHHHHHHHHHHhCCCEEEeCCee
Q 018416 40 GNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCMAR------L----F-TP--KIASYYEEYYKSKGVKFVKGTVL 104 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~--G~~Vtlv~~~~~~l~~------~----~-d~--~~~~~~~~~l~~~GV~v~~~~~v 104 (356)
++|+|||||+.|+.+|..|+++ |.+||++++.+.+.-. . + ++ .+........++.|++++++++|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 81 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHEV 81 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCEE
Confidence 5899999999999999999998 8899999998764210 0 0 00 01112233344579999999999
Q ss_pred eEEEEcCCCcEEEEE-eCCCc--EEecCeEEEecCCCCCch
Q 018416 105 SSFDVDSNGKVVAVN-LRDGN--RLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 105 ~~i~~~~~g~v~~v~-~~~g~--~i~~D~vi~a~G~~p~~~ 142 (356)
++++. +++.+ .+. +.+|+ ++.+|.+|+|+|.+|...
T Consensus 82 ~~id~-~~~~v-~~~~~~~g~~~~~~~d~lviAtG~~p~~p 120 (565)
T 3ntd_A 82 VAIDR-AAKLV-TVRRLLDGSEYQESYDTLLLSPGAAPIVP 120 (565)
T ss_dssp EEEET-TTTEE-EEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEC-CCCEE-EEEecCCCCeEEEECCEEEECCCCCCCCC
Confidence 99975 33333 333 23354 799999999999877653
No 168
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.52 E-value=5.7e-07 Score=86.42 Aligned_cols=102 Identities=18% Similarity=0.241 Sum_probs=73.3
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCcc------CCH----HH------------------------
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARL------FTP----KI------------------------ 83 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~------~d~----~~------------------------ 83 (356)
...+|+|||||+.|+.+|..|++.|.+|+|+|+.+.+..+. +.+ ++
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~ 104 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADE 104 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECC
Confidence 45689999999999999999999999999999986532110 000 00
Q ss_pred ----------------------HHHHHHHHHh--CCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCC
Q 018416 84 ----------------------ASYYEEYYKS--KGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRP 139 (356)
Q Consensus 84 ----------------------~~~~~~~l~~--~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p 139 (356)
...+.+.|.+ .++++++++++++++.++++ ..+++.+|+++.+|.||.|.|..+
T Consensus 105 ~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 105 KGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKK--WTLTFENKPSETADLVILANGGMS 182 (398)
T ss_dssp SSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSS--EEEEETTSCCEEESEEEECSCTTC
T ss_pred CCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCE--EEEEECCCcEEecCEEEECCCcch
Confidence 0112222322 13678999999999874433 357888998999999999999876
Q ss_pred Cc
Q 018416 140 NT 141 (356)
Q Consensus 140 ~~ 141 (356)
..
T Consensus 183 ~v 184 (398)
T 2xdo_A 183 KV 184 (398)
T ss_dssp SC
T ss_pred hH
Confidence 53
No 169
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.52 E-value=7.4e-07 Score=90.40 Aligned_cols=102 Identities=20% Similarity=0.251 Sum_probs=79.5
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc----------------------------------------
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR---------------------------------------- 77 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~---------------------------------------- 77 (356)
...+|+|||||+.|+-+|..|++.|.+|+|+|+.+..-..
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 101 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQD 101 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCC
Confidence 3578999999999999999999999999999987311000
Q ss_pred ----------------------cCC-HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeC-CC--cEEecCeE
Q 018416 78 ----------------------LFT-PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR-DG--NRLPTDMV 131 (356)
Q Consensus 78 ----------------------~~d-~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~-~g--~~i~~D~v 131 (356)
.++ ..+...+.+.+++.||+++.+++|+++..+ ++.+..|.+. +| .++.+|.|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~~G~~~~i~AdlV 180 (591)
T 3i3l_A 102 QAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRRGGESVTVESDFV 180 (591)
T ss_dssp CCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEETTEEEEEEESEE
T ss_pred CccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEecCCceEEEEcCEE
Confidence 011 345666777888899999999999999863 4555667776 66 57999999
Q ss_pred EEecCCCCC
Q 018416 132 VVGIGIRPN 140 (356)
Q Consensus 132 i~a~G~~p~ 140 (356)
|.|+|..+.
T Consensus 181 V~AdG~~S~ 189 (591)
T 3i3l_A 181 IDAGGSGGP 189 (591)
T ss_dssp EECCGGGCH
T ss_pred EECCCCcch
Confidence 999998653
No 170
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.50 E-value=2.6e-09 Score=105.61 Aligned_cols=144 Identities=12% Similarity=0.060 Sum_probs=93.7
Q ss_pred EEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHH--------HHHHHHHHHhCCCEEEeCCeeeEEEEcCCC
Q 018416 42 AVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI--------ASYYEEYYKSKGVKFVKGTVLSSFDVDSNG 113 (356)
Q Consensus 42 vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~--------~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g 113 (356)
++++|+| ++++++.++..|..+ +.+++++++++ ++++. +..+.+.+++.|. ++++.+. + + .
T Consensus 215 ~~~~ggg--~~~~ae~~~~~G~~~-v~~~g~rf~~~-~~~~~el~~rd~v~~~i~~~~~~~~~-v~ld~~~--~---~-~ 283 (472)
T 2e5v_A 215 VTSLDGE--VFLLTETLRGEGAQI-INENGERFLFN-YDKRGELAPRDILSRAIYIEMLKGHK-VFIDLSK--I---E-D 283 (472)
T ss_dssp EECGGGC--CEECCTHHHHTTCEE-EETTCCCGGGG-TCTTGGGSCHHHHHHHHHHHHHHTCC-EEEECTT--C---T-T
T ss_pred EEccCCC--ceeeehhhcCCceEE-ECCCCCCCCcc-CCcccCcCchhHHHHHHHHHHHhCCc-EEEeccc--h---H-H
Confidence 4556776 899999999999888 88899999876 56543 6677777777663 3322210 0 0 0
Q ss_pred cEEEEEeCCCcEEe-cCeEEEecCCCCCchhhhcc--cccccCcEEEecccccCCCCEEEEccccccCccccCccccc-c
Q 018416 114 KVVAVNLRDGNRLP-TDMVVVGIGIRPNTSLFEGQ--LTLEKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRL-E 189 (356)
Q Consensus 114 ~v~~v~~~~g~~i~-~D~vi~a~G~~p~~~l~~~~--l~~~~g~I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~-~ 189 (356)
+ .++++ .+.++++.|..|+ ++++-. .....|+|.||+++||++|+|||+|||+.... +|..+.. .
T Consensus 284 ------~--~~~~~~~~~~~~~~G~dp~-~~i~v~p~~~~~~GGI~vd~~~~t~ipgLyAaGd~a~~~~--hg~~rl~~~ 352 (472)
T 2e5v_A 284 ------F--ERKFPVVAKYLARHGHNYK-VKIPIFPAAHFVDGGIRVNIRGESNIVNLYAIGEVSDSGL--HGANRLASN 352 (472)
T ss_dssp ------H--HHHCHHHHHHHHHTTCCTT-SCEECEEEEEEESCEEECCTTCBCSSBTEEECGGGEECSS--STTSCCTTH
T ss_pred ------H--HHHhHHHHHHHHHhCcCcc-cceEeehhhceeCCCeEECCCCccccCCEEecchhccccc--CCCCCCCcc
Confidence 0 12343 4777888999999 544322 11257999999999999999999999988311 1222111 1
Q ss_pred cHHHHHHHHHHHHHHHcC
Q 018416 190 HVDSARKSAKHAVAAIME 207 (356)
Q Consensus 190 ~~~~A~~~g~~aa~~i~g 207 (356)
....+...|+.|+.++.+
T Consensus 353 sl~~~~v~G~~a~~~~a~ 370 (472)
T 2e5v_A 353 SLLEGLVFGINLPRYVDS 370 (472)
T ss_dssp HHHHHHHHHHHGGGTTTS
T ss_pred cHHHHHHHHHHHHHHHHh
Confidence 233455567777777654
No 171
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.50 E-value=1e-06 Score=89.31 Aligned_cols=102 Identities=22% Similarity=0.336 Sum_probs=80.2
Q ss_pred CcEEEECCchHHHHHHHHHHHC------CCcEEEEeeCCccCCc------------------------------------
Q 018416 40 GNAVVIGGGYIGMECAASLVIN------KINVTMVFPEAHCMAR------------------------------------ 77 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~------G~~Vtlv~~~~~~l~~------------------------------------ 77 (356)
-+|+|||||+.|+.+|..|++. |.+|+|+|+.+.+...
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~~ 115 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFG 115 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhee
Confidence 4799999999999999999999 9999999987543110
Q ss_pred c--------C---C--------------HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeC------CC---
Q 018416 78 L--------F---T--------------PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR------DG--- 123 (356)
Q Consensus 78 ~--------~---d--------------~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~------~g--- 123 (356)
+ + + ..+.+.+.+.+++.||++++++.++++..++++.+..|.+. +|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~ 195 (584)
T 2gmh_A 116 ILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPK 195 (584)
T ss_dssp EECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEE
T ss_pred eeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcc
Confidence 0 0 0 14456677778888999999999999987556777667765 33
Q ss_pred ------cEEecCeEEEecCCCCCc
Q 018416 124 ------NRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 124 ------~~i~~D~vi~a~G~~p~~ 141 (356)
.++.+|.||.|.|..+..
T Consensus 196 ~~~~~g~~i~Ad~VV~AdG~~S~v 219 (584)
T 2gmh_A 196 TTFERGLELHAKVTIFAEGCHGHL 219 (584)
T ss_dssp EEEECCCEEECSEEEECCCTTCHH
T ss_pred cccCCceEEECCEEEEeeCCCchH
Confidence 689999999999988753
No 172
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.50 E-value=5.1e-07 Score=86.91 Aligned_cols=101 Identities=20% Similarity=0.297 Sum_probs=75.7
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc----------------------------------------
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR---------------------------------------- 77 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~---------------------------------------- 77 (356)
+..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+.
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 3568999999999999999999999999999997643100
Q ss_pred --c---CC-----------------HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEec
Q 018416 78 --L---FT-----------------PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGI 135 (356)
Q Consensus 78 --~---~d-----------------~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~ 135 (356)
. ++ ..+.+.+.+.+++ ++++++++|++++.++++ ..+++.+|+++.+|+||.|.
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~a~~vV~Ad 177 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADG--VTVWFTDGSSASGDLLIAAD 177 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTE--EEEEETTSCEEEESEEEECC
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCc--EEEEEcCCCEEeeCEEEECC
Confidence 0 00 1233344444444 889999999999874433 45888999999999999999
Q ss_pred CCCCCch
Q 018416 136 GIRPNTS 142 (356)
Q Consensus 136 G~~p~~~ 142 (356)
|......
T Consensus 178 G~~S~vr 184 (407)
T 3rp8_A 178 GSHSALR 184 (407)
T ss_dssp CTTCSSH
T ss_pred CcChHHH
Confidence 9876653
No 173
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.50 E-value=1.9e-06 Score=81.24 Aligned_cols=164 Identities=14% Similarity=0.137 Sum_probs=104.5
Q ss_pred CcEEEECCchHHHHHHHHHHHC--CCcEEEEeeCCccCCc---------------------------------c----CC
Q 018416 40 GNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCMAR---------------------------------L----FT 80 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~--G~~Vtlv~~~~~~l~~---------------------------------~----~d 80 (356)
-.|+|||+|+.|+.+|..|+++ |.+|+|+++.+.+... + ..
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~~ 159 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKHA 159 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEecH
Confidence 5799999999999999999997 9999999998643200 0 02
Q ss_pred HHHHHHHHHHHHh-CCCEEEeCCeeeEEEEcCC----------------C--cEEEEEeC--------------CCcEEe
Q 018416 81 PKIASYYEEYYKS-KGVKFVKGTVLSSFDVDSN----------------G--KVVAVNLR--------------DGNRLP 127 (356)
Q Consensus 81 ~~~~~~~~~~l~~-~GV~v~~~~~v~~i~~~~~----------------g--~v~~v~~~--------------~g~~i~ 127 (356)
.+..+.+.+.+++ .|++++.++.++++..+++ + ++..+... +..++.
T Consensus 160 ~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~ 239 (344)
T 3jsk_A 160 ALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTIN 239 (344)
T ss_dssp HHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEE
Confidence 3444566666777 5999999999998865332 3 55555441 234799
Q ss_pred cCeEEEecCCCCCc-hh-hh----ccccc-ccC--cEEEe-------cccccCCCCEEEEccccccCccccCcccccccH
Q 018416 128 TDMVVVGIGIRPNT-SL-FE----GQLTL-EKG--GIKVT-------GRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHV 191 (356)
Q Consensus 128 ~D~vi~a~G~~p~~-~l-~~----~~l~~-~~g--~I~vd-------~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~ 191 (356)
++.||.|+|..... .+ .+ -.+.. ..| ...++ ++-+--+|++|++|-.+... +|.+++-|.-
T Consensus 240 Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v~~gl~~~gm~~~~~---~g~~rmgp~f 316 (344)
T 3jsk_A 240 APVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREIVPGLIVGGMELSEI---DGANRMGPTF 316 (344)
T ss_dssp CSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEEETTEEECGGGHHHH---HTCEECCSCC
T ss_pred cCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceEcCCEEEechhhHhh---cCCCCCCccc
Confidence 99999999977652 11 11 11110 111 11111 11111379999999887642 2444443444
Q ss_pred HHHHHHHHHHHHHHc
Q 018416 192 DSARKSAKHAVAAIM 206 (356)
Q Consensus 192 ~~A~~~g~~aa~~i~ 206 (356)
..=...|+.||+.|+
T Consensus 317 g~m~~sg~~~a~~~~ 331 (344)
T 3jsk_A 317 GAMALSGVKAAHEAI 331 (344)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred ceeeecCHHHHHHHH
Confidence 444567888887765
No 174
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.49 E-value=7.2e-08 Score=94.86 Aligned_cols=90 Identities=18% Similarity=0.197 Sum_probs=71.5
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCcc-------CCcc-CCHHHHHHHHHHHHhCCCEEEeCCeeeEEEE
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHC-------MARL-FTPKIASYYEEYYKSKGVKFVKGTVLSSFDV 109 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~-------l~~~-~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~ 109 (356)
.+++|+|||||+.|+.+|..|++.|++|+|+++.+.+ ++.+ ++.++.....+.+++.||++++++.+..
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~--- 197 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVGR--- 197 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBTT---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEecc---
Confidence 3578999999999999999999999999999998765 2321 4677888888899999999999987521
Q ss_pred cCCCcEEEEEeCCCcEEecCeEEEecCCC
Q 018416 110 DSNGKVVAVNLRDGNRLPTDMVVVGIGIR 138 (356)
Q Consensus 110 ~~~g~v~~v~~~~g~~i~~D~vi~a~G~~ 138 (356)
.+.++++ .+++|.|++|+|..
T Consensus 198 -------~v~~~~~-~~~~d~vvlAtG~~ 218 (456)
T 2vdc_G 198 -------DASLPEL-RRKHVAVLVATGVY 218 (456)
T ss_dssp -------TBCHHHH-HSSCSEEEECCCCC
T ss_pred -------EEEhhHh-HhhCCEEEEecCCC
Confidence 1222222 36799999999986
No 175
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.47 E-value=1.2e-06 Score=86.61 Aligned_cols=51 Identities=24% Similarity=0.370 Sum_probs=42.7
Q ss_pred HHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCC
Q 018416 87 YEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIR 138 (356)
Q Consensus 87 ~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~ 138 (356)
+.+.+++.|++|+++++|++|.. +++++..|+++||+++.+|.||++++..
T Consensus 227 L~~~~~~~Gg~I~~~~~V~~I~~-~~~~~~gV~~~~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 227 MIKLFQDLGGEVVLNARVSHMET-TGNKIEAVHLEDGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSCEEECCC--
T ss_pred HHHHHHHhCCceeeecceeEEEe-eCCeEEEEEecCCcEEEcCEEEECCCHH
Confidence 34556778999999999999987 5788888999999999999999987744
No 176
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.46 E-value=1.9e-07 Score=91.37 Aligned_cols=101 Identities=16% Similarity=0.157 Sum_probs=73.0
Q ss_pred CcEEEECCchHHHHHHHHHHHC--CCcEEEEeeCCccCC----------ccC-C-HHHHHHHHHHHHhCCCEEEeCCeee
Q 018416 40 GNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCMA----------RLF-T-PKIASYYEEYYKSKGVKFVKGTVLS 105 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~--G~~Vtlv~~~~~~l~----------~~~-d-~~~~~~~~~~l~~~GV~v~~~~~v~ 105 (356)
++++|||+|+.|+.+|..|++. |.+|+++++.+.+.- ... + .++.....+.+++.||+++.++.++
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 80 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEIT 80 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 3799999999999999999998 999999999875320 000 1 1122223466778899999999999
Q ss_pred EEEEcCCCcEEEEEe-CCCc--EEecCeEEEecCCCCCch
Q 018416 106 SFDVDSNGKVVAVNL-RDGN--RLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 106 ~i~~~~~g~v~~v~~-~~g~--~i~~D~vi~a~G~~p~~~ 142 (356)
.+.. +++.+ .+.. .+|+ ++.+|.+|+|+|.+|...
T Consensus 81 ~i~~-~~~~v-~~~~~~~g~~~~~~~d~lviAtG~~p~~p 118 (447)
T 1nhp_A 81 AIQP-KEHQV-TVKDLVSGEERVENYDKLIISPGAVPFEL 118 (447)
T ss_dssp EEET-TTTEE-EEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEeC-CCCEE-EEEecCCCceEEEeCCEEEEcCCCCcCCC
Confidence 9875 23322 3332 3465 489999999999887643
No 177
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.46 E-value=6.7e-07 Score=83.98 Aligned_cols=95 Identities=18% Similarity=0.289 Sum_probs=69.3
Q ss_pred CcEEEECCchHHHHHHHHHHH---CCCcEEEEeeCCccCCc-------------------cC---CH---HH--------
Q 018416 40 GNAVVIGGGYIGMECAASLVI---NKINVTMVFPEAHCMAR-------------------LF---TP---KI-------- 83 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~---~G~~Vtlv~~~~~~l~~-------------------~~---d~---~~-------- 83 (356)
++|+|||||++|+-+|..|++ .|.+|+|+|+++.+..+ .+ +. ..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~ 81 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELL 81 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHH
Confidence 379999999999999999999 99999999987532110 00 00 11
Q ss_pred ------------------------------HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEE
Q 018416 84 ------------------------------ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVV 133 (356)
Q Consensus 84 ------------------------------~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~ 133 (356)
...++...++.|++++++++|++++.++++ ..+.+.+|+++.+|.||+
T Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~--~~v~~~~g~~~~ad~vV~ 159 (342)
T 3qj4_A 82 AYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDK--WEVSKQTGSPEQFDLIVL 159 (342)
T ss_dssp HTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSS--EEEEESSSCCEEESEEEE
T ss_pred hCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCE--EEEEECCCCEEEcCEEEE
Confidence 111222233348999999999999874444 357788888899999999
Q ss_pred ecC
Q 018416 134 GIG 136 (356)
Q Consensus 134 a~G 136 (356)
|++
T Consensus 160 A~p 162 (342)
T 3qj4_A 160 TMP 162 (342)
T ss_dssp CSC
T ss_pred CCC
Confidence 986
No 178
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.45 E-value=7.2e-07 Score=89.22 Aligned_cols=100 Identities=21% Similarity=0.217 Sum_probs=77.0
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCC-------------------------------------------
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA------------------------------------------- 76 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~------------------------------------------- 76 (356)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+..
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLAE 85 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEES
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEEe
Confidence 4799999999999999999999999999998753200
Q ss_pred ------------c-----------------cC-CHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCc--EEEEEeCCC-
Q 018416 77 ------------R-----------------LF-TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGK--VVAVNLRDG- 123 (356)
Q Consensus 77 ------------~-----------------~~-d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~--v~~v~~~~g- 123 (356)
. .+ ...+...+.+.+++.|+++++++++++++.++++. -..+++.++
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~ 165 (535)
T 3ihg_A 86 SVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPD 165 (535)
T ss_dssp SSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETT
T ss_pred ccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCC
Confidence 0 00 12455667777888899999999999998754410 234556565
Q ss_pred --cEEecCeEEEecCCCC
Q 018416 124 --NRLPTDMVVVGIGIRP 139 (356)
Q Consensus 124 --~~i~~D~vi~a~G~~p 139 (356)
.++.+|+||.|.|...
T Consensus 166 ~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 166 GEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp EEEEEEEEEEEECCCTTC
T ss_pred CeEEEEeCEEEECCCCcc
Confidence 6799999999999875
No 179
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.45 E-value=1.2e-06 Score=89.17 Aligned_cols=100 Identities=14% Similarity=0.297 Sum_probs=76.9
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc-cC-----------------------Cc------------------
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH-CM-----------------------AR------------------ 77 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~-~l-----------------------~~------------------ 77 (356)
-.|+|||||..|+++|..|++.|.+|+|+++.+. +. ..
T Consensus 22 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l~~ 101 (641)
T 3cp8_A 22 YDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRMLNR 101 (641)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEECS
T ss_pred CCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhccc
Confidence 4799999999999999999999999999998741 10 00
Q ss_pred -----------cCCH-HHHHHHHHHHHh-CCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCc
Q 018416 78 -----------LFTP-KIASYYEEYYKS-KGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 78 -----------~~d~-~~~~~~~~~l~~-~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 141 (356)
..|. .+...+.+.+++ .||+++. ..++.+.. +++.+..|.+.+|+++.+|.||+|+|..++.
T Consensus 102 ~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~-d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~~ 176 (641)
T 3cp8_A 102 SKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSA-NSGKFSSVTVRSGRAIQAKAAILACGTFLNG 176 (641)
T ss_dssp SSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEE-ETTEEEEEEETTSCEEEEEEEEECCTTCBTC
T ss_pred ccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEe-cCCEEEEEEECCCcEEEeCEEEECcCCCCCc
Confidence 0111 445666777777 4999965 48888875 4566666888899999999999999987653
No 180
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.43 E-value=1.1e-06 Score=83.12 Aligned_cols=53 Identities=17% Similarity=0.274 Sum_probs=41.0
Q ss_pred HHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCC
Q 018416 83 IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIR 138 (356)
Q Consensus 83 ~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~ 138 (356)
+...+.+.+++.|++++.+++|++++.++++ ..+++.+| ++.+|.||+|+|..
T Consensus 151 l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~--~~v~~~~g-~~~a~~vV~a~G~~ 203 (372)
T 2uzz_A 151 AIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG--VTIETADG-EYQAKKAIVCAGTW 203 (372)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECSSS--EEEEESSC-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE--EEEEECCC-eEEcCEEEEcCCcc
Confidence 3445566777889999999999999874333 35677776 59999999999964
No 181
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.41 E-value=2.6e-07 Score=90.29 Aligned_cols=100 Identities=16% Similarity=0.198 Sum_probs=69.6
Q ss_pred cEEEECCchHHHHHHHHHHHCC--CcEEEEeeCCccCC-c-cC---------CHH--HHHHHHHHHHhCCCEEEeCCeee
Q 018416 41 NAVVIGGGYIGMECAASLVINK--INVTMVFPEAHCMA-R-LF---------TPK--IASYYEEYYKSKGVKFVKGTVLS 105 (356)
Q Consensus 41 ~vvVvGgG~iGlE~A~~L~~~G--~~Vtlv~~~~~~l~-~-~~---------d~~--~~~~~~~~l~~~GV~v~~~~~v~ 105 (356)
||+|||||+.|+.+|..|+++| .+|+|+++.+...- + .+ +.. +....++.+++.||+++.+++++
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V~ 81 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEVI 81 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCCeEE
Confidence 6999999999999999999988 46999998765321 0 00 000 11112345677899999999999
Q ss_pred EEEEcCCCcEEEEEeC---CCcEEecCeEEEecCCCCCch
Q 018416 106 SFDVDSNGKVVAVNLR---DGNRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 106 ~i~~~~~g~v~~v~~~---~g~~i~~D~vi~a~G~~p~~~ 142 (356)
+++. +... ..+... ++.++.+|.+|+|+|.+|+..
T Consensus 82 ~id~-~~~~-~~~~~~~~~~~~~~~yd~lVIATGs~p~~p 119 (437)
T 4eqs_A 82 AIND-ERQT-VSVLNRKTNEQFEESYDKLILSPGASANSL 119 (437)
T ss_dssp EEET-TTTE-EEEEETTTTEEEEEECSEEEECCCEEECCC
T ss_pred EEEc-cCcE-EEEEeccCCceEEEEcCEEEECCCCccccc
Confidence 9975 2332 233322 234689999999999988653
No 182
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.41 E-value=2.2e-06 Score=85.75 Aligned_cols=56 Identities=16% Similarity=0.335 Sum_probs=45.3
Q ss_pred HHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCc
Q 018416 85 SYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 85 ~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 141 (356)
..+.+.+++.||+++.+ +|++++.++++.+..+.+.+|+++.+|.||.|+|..+..
T Consensus 169 ~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 169 DFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCC
T ss_pred HHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhh
Confidence 44555666789999999 899998755666667888889899999999999986554
No 183
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.41 E-value=7.9e-07 Score=89.82 Aligned_cols=99 Identities=18% Similarity=0.246 Sum_probs=77.1
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC-------------------------------------Cc----c
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM-------------------------------------AR----L 78 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l-------------------------------------~~----~ 78 (356)
..|+|||+|++|+-+|..|++.|.+|+|+|+.+.+. .. .
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 129 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQG 129 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccccc
Confidence 479999999999999999999999999999864321 00 0
Q ss_pred ---------------C-CHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEe--CCC-cEEecCeEEEecCCCC
Q 018416 79 ---------------F-TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNL--RDG-NRLPTDMVVVGIGIRP 139 (356)
Q Consensus 79 ---------------~-d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~--~~g-~~i~~D~vi~a~G~~p 139 (356)
+ ...+.+.+.+.+++.|++++.+++|++++.++++. .+++ .+| +++.+|+||.|.|...
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v--~v~~~~~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 130 LDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAV--EVTVAGPSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp CBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCE--EEEEEETTEEEEEEESEEEECSCSSC
T ss_pred ccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeE--EEEEEeCCCcEEEEeCEEEEcCCCCc
Confidence 1 13456667777888899999999999998754442 3555 678 7899999999999876
Q ss_pred C
Q 018416 140 N 140 (356)
Q Consensus 140 ~ 140 (356)
.
T Consensus 208 ~ 208 (570)
T 3fmw_A 208 T 208 (570)
T ss_dssp H
T ss_pred h
Confidence 3
No 184
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.41 E-value=1.9e-06 Score=85.76 Aligned_cols=101 Identities=19% Similarity=0.197 Sum_probs=77.2
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCcc--------CCc----------------------------------
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHC--------MAR---------------------------------- 77 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~--------l~~---------------------------------- 77 (356)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+.. .+.
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~ 87 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKEP 87 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCCc
Confidence 47999999999999999999999999999998511 000
Q ss_pred -------------------cCC-HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEE--EeCCCc--EEecCeEEE
Q 018416 78 -------------------LFT-PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAV--NLRDGN--RLPTDMVVV 133 (356)
Q Consensus 78 -------------------~~d-~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v--~~~~g~--~i~~D~vi~ 133 (356)
.++ ..+.+.+.+.+++.||+++.+++|+++.. +++.+..+ ...+|+ ++.+|.||.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~-~~~~v~gv~~~~~dG~~~~i~ad~VI~ 166 (512)
T 3e1t_A 88 EPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLF-EGERAVGVRYRNTEGVELMAHARFIVD 166 (512)
T ss_dssp SCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEE-ETTEEEEEEEECSSSCEEEEEEEEEEE
T ss_pred cccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEE-ECCEEEEEEEEeCCCCEEEEEcCEEEE
Confidence 011 23455677777889999999999999987 45555434 445674 799999999
Q ss_pred ecCCCCCc
Q 018416 134 GIGIRPNT 141 (356)
Q Consensus 134 a~G~~p~~ 141 (356)
|+|.....
T Consensus 167 AdG~~S~v 174 (512)
T 3e1t_A 167 ASGNRTRV 174 (512)
T ss_dssp CCCTTCSS
T ss_pred CCCcchHH
Confidence 99987543
No 185
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.40 E-value=2.6e-06 Score=81.03 Aligned_cols=56 Identities=21% Similarity=0.453 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCC
Q 018416 82 KIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPN 140 (356)
Q Consensus 82 ~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~ 140 (356)
.+...+.+.+++.|++++.+++|++++.++++ ..+++.+| ++.+|.||+|+|..++
T Consensus 151 ~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~--~~v~~~~g-~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 151 NCIRAYRELAEARGAKVLTHTRVEDFDISPDS--VKIETANG-SYTADKLIVSMGAWNS 206 (389)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSC--EEEEETTE-EEEEEEEEECCGGGHH
T ss_pred HHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe--EEEEeCCC-EEEeCEEEEecCccHH
Confidence 34455667778889999999999999874443 34666655 7999999999997643
No 186
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.40 E-value=2.4e-06 Score=87.93 Aligned_cols=54 Identities=15% Similarity=0.184 Sum_probs=42.7
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCC
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRP 139 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p 139 (356)
...+.+.+++.|++++++++|+++..+ ++.+ .|++.+|.++.+|.||+|+|...
T Consensus 420 ~~aL~~~a~~~Gv~i~~~t~V~~l~~~-~~~v-~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 420 TRNVLELAQQQGLQIYYQYQLQNFSRK-DDCW-LLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHTTCEEEESCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEe-CCeE-EEEECCCCEEECCEEEECCCcch
Confidence 334556667789999999999999874 3443 67888888899999999999653
No 187
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.39 E-value=1.8e-07 Score=91.71 Aligned_cols=100 Identities=13% Similarity=0.165 Sum_probs=72.1
Q ss_pred cEEEECCchHHHHHHHHHHHC--CCcEEEEeeCCccC----------CccC---CH-HHHHHHHHHHHhCCCEEEeCCee
Q 018416 41 NAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCM----------ARLF---TP-KIASYYEEYYKSKGVKFVKGTVL 104 (356)
Q Consensus 41 ~vvVvGgG~iGlE~A~~L~~~--G~~Vtlv~~~~~~l----------~~~~---d~-~~~~~~~~~l~~~GV~v~~~~~v 104 (356)
+++|||+|+.|+.+|..|++. |.+|+++++.+.+. ...+ ++ ++.....+.+++.||+++.++.+
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 81 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQV 81 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESEEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCCEE
Confidence 699999999999999999998 99999999987531 1101 11 12222345677889999999999
Q ss_pred eEEEEcCCCcEEEEEe-CC--CcEEecCeEEEecCCCCCch
Q 018416 105 SSFDVDSNGKVVAVNL-RD--GNRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 105 ~~i~~~~~g~v~~v~~-~~--g~~i~~D~vi~a~G~~p~~~ 142 (356)
+.++.+ ++.+ .+.. .+ ++++.+|.+++|+|.+|...
T Consensus 82 ~~i~~~-~~~v-~v~~~~~g~~~~~~~d~lviAtGs~p~~p 120 (452)
T 2cdu_A 82 TNVDPE-TKTI-KVKDLITNEEKTEAYDKLIMTTGSKPTVP 120 (452)
T ss_dssp EEEEGG-GTEE-EEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEcC-CCEE-EEEecCCCceEEEECCEEEEccCCCcCCC
Confidence 998752 3322 2332 12 45799999999999887643
No 188
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.38 E-value=4.4e-07 Score=89.63 Aligned_cols=100 Identities=21% Similarity=0.297 Sum_probs=71.3
Q ss_pred CcEEEECCchHHHHHHHHHHHC--CCcEEEEeeCCccC-Cc-----c-----CC-HHHHHHHHHHH-HhCCCEEEeCCee
Q 018416 40 GNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCM-AR-----L-----FT-PKIASYYEEYY-KSKGVKFVKGTVL 104 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~--G~~Vtlv~~~~~~l-~~-----~-----~d-~~~~~~~~~~l-~~~GV~v~~~~~v 104 (356)
++++|||+|+.|+.+|..|++. |.+|+++++.+.+. .. . .+ .++.....+.+ ++.||+++.++.+
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~v 116 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEV 116 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCEE
Confidence 5899999999999999999996 89999999987531 10 0 00 11111223445 4459999999999
Q ss_pred eEEEEcCCCcEEEEEe-CCCc--EEecCeEEEecCCCCCc
Q 018416 105 SSFDVDSNGKVVAVNL-RDGN--RLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 105 ~~i~~~~~g~v~~v~~-~~g~--~i~~D~vi~a~G~~p~~ 141 (356)
+.++. +++.+ .+.. .+|+ ++.+|.+|+|+|.+|..
T Consensus 117 ~~i~~-~~~~v-~v~~~~~g~~~~~~~d~lviAtG~~p~~ 154 (480)
T 3cgb_A 117 TKVDT-EKKIV-YAEHTKTKDVFEFSYDRLLIATGVRPVM 154 (480)
T ss_dssp EEEET-TTTEE-EEEETTTCCEEEEECSEEEECCCEEECC
T ss_pred EEEEC-CCCEE-EEEEcCCCceEEEEcCEEEECCCCcccC
Confidence 99975 23332 3443 4566 79999999999988764
No 189
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.37 E-value=4e-06 Score=83.28 Aligned_cols=101 Identities=21% Similarity=0.338 Sum_probs=78.5
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc----------------------c-----------------
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR----------------------L----------------- 78 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~----------------------~----------------- 78 (356)
...+|+|||+|+.|+-+|..|++.|.+|+|+|+.+.+... +
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 90 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVD 90 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceecc
Confidence 3468999999999999999999999999999986432100 0
Q ss_pred -------C-------CHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCc---EEecCeEEEecCCCCC
Q 018416 79 -------F-------TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGN---RLPTDMVVVGIGIRPN 140 (356)
Q Consensus 79 -------~-------d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~---~i~~D~vi~a~G~~p~ 140 (356)
. ...+.+.+.+.+++.|++++.++++++++.++++ + .+++.++. ++.+|+||.|.|.+..
T Consensus 91 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v-~v~~~~~~g~~~~~a~~vVgADG~~S~ 167 (499)
T 2qa2_A 91 FGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDH-V-VVEVEGPDGPRSLTTRYVVGCDGGRST 167 (499)
T ss_dssp GGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSC-E-EEEEECSSCEEEEEEEEEEECCCTTCH
T ss_pred cccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-E-EEEEEcCCCcEEEEeCEEEEccCcccH
Confidence 0 1345566777778889999999999999875444 3 46666664 7999999999998754
No 190
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.36 E-value=1.3e-06 Score=85.77 Aligned_cols=98 Identities=22% Similarity=0.233 Sum_probs=70.6
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc-------------------------------------cCCH-
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR-------------------------------------LFTP- 81 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~-------------------------------------~~d~- 81 (356)
.+++|||||+.|+.+|..|++.|.+|+|+++.+.+... .++.
T Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 82 (468)
T 2qae_A 3 YDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDSA 82 (468)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCHH
Confidence 47999999999999999999999999999998643100 0111
Q ss_pred H-----------HHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCC--cEEecCeEEEecCCCCCch
Q 018416 82 K-----------IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG--NRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 82 ~-----------~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g--~~i~~D~vi~a~G~~p~~~ 142 (356)
+ +...+.+.+++.||+++.++.+ .++ .+. ..+.+.+| +++.+|.+|+|+|.+|...
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~-~i~---~~~-~~v~~~~G~~~~~~~d~lviAtG~~p~~p 151 (468)
T 2qae_A 83 KMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGS-FET---AHS-IRVNGLDGKQEMLETKKTIIATGSEPTEL 151 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEE-EEE---TTE-EEEEETTSCEEEEEEEEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Eee---CCE-EEEEecCCceEEEEcCEEEECCCCCcCCC
Confidence 1 1112345667789999988754 342 222 35666777 6899999999999887653
No 191
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.36 E-value=3e-06 Score=82.20 Aligned_cols=55 Identities=22% Similarity=0.225 Sum_probs=45.2
Q ss_pred HHHHHHHHHHhCCCEEEeCC---eeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCC
Q 018416 83 IASYYEEYYKSKGVKFVKGT---VLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIR 138 (356)
Q Consensus 83 ~~~~~~~~l~~~GV~v~~~~---~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~ 138 (356)
+...+.+.+++.|+++++++ +|+++.. +++.+..|++.+|+++.+|.||+|+|..
T Consensus 163 ~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~-~~~~v~gV~t~~G~~i~Ad~VV~AtG~~ 220 (438)
T 3dje_A 163 ALVAAAREAQRMGVKFVTGTPQGRVVTLIF-ENNDVKGAVTADGKIWRAERTFLCAGAS 220 (438)
T ss_dssp HHHHHHHHHHHTTCEEEESTTTTCEEEEEE-ETTEEEEEEETTTEEEECSEEEECCGGG
T ss_pred HHHHHHHHHHhcCCEEEeCCcCceEEEEEe-cCCeEEEEEECCCCEEECCEEEECCCCC
Confidence 34455566778899999999 9999986 4566766889999899999999999964
No 192
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.35 E-value=3.9e-07 Score=90.71 Aligned_cols=100 Identities=17% Similarity=0.327 Sum_probs=68.7
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC-----C----ccCCH-HHHHHHHHHH--HhCCCEEEeCCeeeEE
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM-----A----RLFTP-KIASYYEEYY--KSKGVKFVKGTVLSSF 107 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l-----~----~~~d~-~~~~~~~~~l--~~~GV~v~~~~~v~~i 107 (356)
+||||||||+.|+.+|..|++.+.+||||++.+... + ..+++ ++...+.+.+ ++.+++++.+ ++++|
T Consensus 43 prVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~-~v~~I 121 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEA-EATSI 121 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEE-EEEEE
T ss_pred CCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEE-EEEEE
Confidence 479999999999999999999999999999987531 1 11222 1222233333 2457888764 67888
Q ss_pred EEcCCCcEEEEE------------------eCCCcEEecCeEEEecCCCCCch
Q 018416 108 DVDSNGKVVAVN------------------LRDGNRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 108 ~~~~~g~v~~v~------------------~~~g~~i~~D~vi~a~G~~p~~~ 142 (356)
+. +...+ .+. ..++.++++|.+|+|+|.+|+..
T Consensus 122 D~-~~k~V-~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~ 172 (502)
T 4g6h_A 122 NP-DRNTV-TIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTF 172 (502)
T ss_dssp EG-GGTEE-EEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCT
T ss_pred Eh-hhCEE-EEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccC
Confidence 65 22222 222 13567899999999999988764
No 193
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.35 E-value=3.8e-06 Score=83.41 Aligned_cols=101 Identities=23% Similarity=0.319 Sum_probs=77.6
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCC----------------------cc-----------------
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA----------------------RL----------------- 78 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~----------------------~~----------------- 78 (356)
...+|+|||+|+.|+-+|..|++.|.+|+|+|+.+.+.. .+
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 89 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPID 89 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceecc
Confidence 446899999999999999999999999999998753210 00
Q ss_pred ---C-----------CHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCc---EEecCeEEEecCCCCC
Q 018416 79 ---F-----------TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGN---RLPTDMVVVGIGIRPN 140 (356)
Q Consensus 79 ---~-----------d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~---~i~~D~vi~a~G~~p~ 140 (356)
+ ...+.+.+.+.+++.|++++.++++++++.++++ + .+++.++. ++.+|+||.|.|.+..
T Consensus 90 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v-~v~~~~~~g~~~~~a~~vVgADG~~S~ 166 (500)
T 2qa1_A 90 FGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAG-V-TVEVRGPEGKHTLRAAYLVGCDGGRSS 166 (500)
T ss_dssp GGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTE-E-EEEEEETTEEEEEEESEEEECCCTTCH
T ss_pred cccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCe-E-EEEEEcCCCCEEEEeCEEEECCCcchH
Confidence 0 0245566677778889999999999999874443 3 46666664 7999999999998754
No 194
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.34 E-value=1.6e-06 Score=83.55 Aligned_cols=100 Identities=18% Similarity=0.217 Sum_probs=74.5
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCc-EEEEeeCCccCCcc----CC---------------------------------
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKIN-VTMVFPEAHCMARL----FT--------------------------------- 80 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~-Vtlv~~~~~~l~~~----~d--------------------------------- 80 (356)
..+|+|||||+.|+.+|..|++.|.+ |+|+|+.+.+.+.. +.
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g 83 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSG 83 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCC
Confidence 35899999999999999999999999 99999976531100 00
Q ss_pred -----------------------HHHHHHHHHHHHh-CC-CEEEeCCeeeEEEEcCCCcEEEEEeCC---C--cEEecCe
Q 018416 81 -----------------------PKIASYYEEYYKS-KG-VKFVKGTVLSSFDVDSNGKVVAVNLRD---G--NRLPTDM 130 (356)
Q Consensus 81 -----------------------~~~~~~~~~~l~~-~G-V~v~~~~~v~~i~~~~~g~v~~v~~~~---g--~~i~~D~ 130 (356)
.++.+.+.+.+++ .| +++++++++++++. +++ ..+.+.+ | +++.+|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~--v~v~~~~~~~g~~~~~~ad~ 160 (410)
T 3c96_A 84 ATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG--RVLIGARDGHGKPQALGADV 160 (410)
T ss_dssp CEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT--EEEEEEEETTSCEEEEEESE
T ss_pred CEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc--cEEEEecCCCCCceEEecCE
Confidence 1344556666665 35 68999999999987 455 2355544 7 5799999
Q ss_pred EEEecCCCCCc
Q 018416 131 VVVGIGIRPNT 141 (356)
Q Consensus 131 vi~a~G~~p~~ 141 (356)
||.|.|..+..
T Consensus 161 vV~AdG~~S~v 171 (410)
T 3c96_A 161 LVGADGIHSAV 171 (410)
T ss_dssp EEECCCTTCHH
T ss_pred EEECCCccchh
Confidence 99999987654
No 195
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.33 E-value=4.2e-07 Score=90.05 Aligned_cols=100 Identities=17% Similarity=0.220 Sum_probs=72.6
Q ss_pred CcEEEECCchHHHHHHHHHHHCC---CcEEEEeeCCccC----------Ccc-C-CHHHHHHHHHHHHhCCCEEEeCCee
Q 018416 40 GNAVVIGGGYIGMECAASLVINK---INVTMVFPEAHCM----------ARL-F-TPKIASYYEEYYKSKGVKFVKGTVL 104 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G---~~Vtlv~~~~~~l----------~~~-~-d~~~~~~~~~~l~~~GV~v~~~~~v 104 (356)
.+++|||+|+.|+.+|..|++.| .+|+|+++.+.+. ... . ..++.....+.+++.||+++.++.+
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~v 115 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMESPV 115 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEETTCCE
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEeCCEE
Confidence 68999999999999999999988 9999999987531 000 0 1112122345677889999999999
Q ss_pred eEEEEcCCCcEEEEEeCC--CcEEecCeEEEecCCCCCch
Q 018416 105 SSFDVDSNGKVVAVNLRD--GNRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 105 ~~i~~~~~g~v~~v~~~~--g~~i~~D~vi~a~G~~p~~~ 142 (356)
+.++. +++.+ .+.. + ++++.+|.+|+|+|.+|...
T Consensus 116 ~~i~~-~~~~v-~v~~-~g~~~~~~~d~lviAtG~~p~~p 152 (490)
T 2bc0_A 116 QSIDY-DAKTV-TALV-DGKNHVETYDKLIFATGSQPILP 152 (490)
T ss_dssp EEEET-TTTEE-EEEE-TTEEEEEECSEEEECCCEEECCC
T ss_pred EEEEC-CCCEE-EEEe-CCcEEEEECCEEEECCCCCcCCC
Confidence 99975 23322 2321 3 35799999999999887653
No 196
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.33 E-value=1.7e-06 Score=85.12 Aligned_cols=98 Identities=22% Similarity=0.243 Sum_probs=71.4
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc------------------------------cCCHH-H-----
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR------------------------------LFTPK-I----- 83 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~------------------------------~~d~~-~----- 83 (356)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+... .++.. +
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRKD 84 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHHH
Confidence 37999999999999999999999999999977654211 01111 0
Q ss_pred -----H--HHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcE--EecCeEEEecCCCCCch
Q 018416 84 -----A--SYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNR--LPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 84 -----~--~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~--i~~D~vi~a~G~~p~~~ 142 (356)
. ..+.+.+++.||+++.+ .+..++. . ...+.+.+|++ +.+|.+|+|+|.+|...
T Consensus 85 ~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id~---~-~~~V~~~~g~~~~~~~d~lviAtG~~p~~p 147 (466)
T 3l8k_A 85 YVQELRFKQHKRNMSQYETLTFYKG-YVKIKDP---T-HVIVKTDEGKEIEAETRYMIIASGAETAKL 147 (466)
T ss_dssp HHHHHHHHHHHHHHTTCTTEEEESE-EEEEEET---T-EEEEEETTSCEEEEEEEEEEECCCEEECCC
T ss_pred hheeccccchHHHHHHhCCCEEEEe-EEEEecC---C-eEEEEcCCCcEEEEecCEEEECCCCCccCC
Confidence 1 33444556789999877 5666642 2 24577788888 99999999999877643
No 197
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.33 E-value=1e-06 Score=86.59 Aligned_cols=99 Identities=17% Similarity=0.224 Sum_probs=71.5
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCcc------------------------------------CCHH
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARL------------------------------------FTPK 82 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~------------------------------------~d~~ 82 (356)
..+++|||+|+.|+.+|..|++.|.+|+++++.+.+.... ++..
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDLA 85 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCHH
Confidence 4689999999999999999999999999999986431100 1110
Q ss_pred ------------HHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCC--cEEecCeEEEecCCCCCch
Q 018416 83 ------------IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG--NRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 83 ------------~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g--~~i~~D~vi~a~G~~p~~~ 142 (356)
+...+.+.+++.||+++.++.+. ++ .+. ..+.+.+| +++.+|.+|+|+|.+|...
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~---~~~-~~v~~~~G~~~~i~~d~lIiAtGs~p~~p 154 (470)
T 1dxl_A 86 AMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF-VS---PSE-ISVDTIEGENTVVKGKHIIIATGSDVKSL 154 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-EE---TTE-EEECCSSSCCEEEECSEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-ec---CCE-EEEEeCCCceEEEEcCEEEECCCCCCCCC
Confidence 11223456677899999998653 32 222 34556677 6799999999999887653
No 198
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.32 E-value=3e-06 Score=80.17 Aligned_cols=52 Identities=12% Similarity=0.030 Sum_probs=40.8
Q ss_pred HHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCC
Q 018416 85 SYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRP 139 (356)
Q Consensus 85 ~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p 139 (356)
..+.+.++++|++++++++|++++.++ +. ..|++.+| ++.+|.||+|+|...
T Consensus 158 ~~l~~~a~~~Gv~i~~~~~V~~i~~~~-~~-~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 158 QGYLRGIRRNQGQVLCNHEALEIRRVD-GA-WEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHTTCEEESSCCCCEEEEET-TE-EEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHCCCEEEcCCEEEEEEEeC-Ce-EEEEeCCC-EEEcCEEEECCChhH
Confidence 345566778899999999999998743 33 46777777 899999999999643
No 199
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.31 E-value=1.8e-06 Score=84.61 Aligned_cols=97 Identities=22% Similarity=0.193 Sum_probs=70.6
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc-----------------------------------cCCHH--
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR-----------------------------------LFTPK-- 82 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~-----------------------------------~~d~~-- 82 (356)
.+++|||||+.|+.+|..|++.|.+|+++++. .+... .++.+
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 82 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAKV 82 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHHHH
Confidence 47999999999999999999999999999987 22100 01111
Q ss_pred ----------HHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCC-cEEecCeEEEecCCCCCch
Q 018416 83 ----------IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG-NRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 83 ----------~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g-~~i~~D~vi~a~G~~p~~~ 142 (356)
+.+.+.+.+++.||+++.++.+. ++ ++. ..+.+.+| +++.+|.+|+|+|.+|...
T Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-id---~~~-v~V~~~~G~~~i~~d~lViATGs~p~~~ 148 (455)
T 1ebd_A 83 QEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYF-VD---ANT-VRVVNGDSAQTYTFKNAIIATGSRPIEL 148 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEE-EE---TTE-EEEEETTEEEEEECSEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-cc---CCe-EEEEeCCCcEEEEeCEEEEecCCCCCCC
Confidence 22234566778899999987653 32 232 35666777 6899999999999887653
No 200
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.31 E-value=1.8e-06 Score=86.16 Aligned_cols=96 Identities=16% Similarity=0.194 Sum_probs=70.3
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC---------------------------------CccC-----CH
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM---------------------------------ARLF-----TP 81 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l---------------------------------~~~~-----d~ 81 (356)
.+++|||||+.|+.+|..|++.|.+|+|+++.+.+. +... ..
T Consensus 44 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 123 (523)
T 1mo9_A 44 YDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVVGIK 123 (523)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCCCHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhhhHH
Confidence 579999999999999999999999999999987321 1111 11
Q ss_pred HHHHHH----H---HHH-----HhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCch
Q 018416 82 KIASYY----E---EYY-----KSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 82 ~~~~~~----~---~~l-----~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 142 (356)
++.+.+ . +.+ ++.||++++...++.+.. . .+.+. ++++.+|.+|+|+|.+|...
T Consensus 124 ~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~---~---~v~~~-g~~~~~d~lViATGs~p~~p 189 (523)
T 1mo9_A 124 EVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN---H---TVEAA-GKVFKAKNLILAVGAGPGTL 189 (523)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET---T---EEEET-TEEEEBSCEEECCCEECCCC
T ss_pred HHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC---C---EEEEC-CEEEEeCEEEECCCCCCCCC
Confidence 222222 2 455 788999996667777742 2 34444 77899999999999887653
No 201
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.30 E-value=7.7e-07 Score=88.27 Aligned_cols=100 Identities=17% Similarity=0.174 Sum_probs=72.1
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc-------c--C---CHHHHHHHHHHHHhCCCEEEeCCeeeEE
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR-------L--F---TPKIASYYEEYYKSKGVKFVKGTVLSSF 107 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~-------~--~---d~~~~~~~~~~l~~~GV~v~~~~~v~~i 107 (356)
.+|+|||+|+.|+.+|..|++. .+|+|+++.+.+... . + ..++...+.+.+ +.||++++++.+.++
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v~~i 186 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSALGV 186 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEECCC
T ss_pred CCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEEEEE
Confidence 4799999999999999999999 999999998765211 0 1 123334444444 679999999999888
Q ss_pred EEcCCCcEEEEEeCCCc--EEecCeEEEecCCCCCch
Q 018416 108 DVDSNGKVVAVNLRDGN--RLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 108 ~~~~~g~v~~v~~~~g~--~i~~D~vi~a~G~~p~~~ 142 (356)
... +..+......+++ ++.+|.+++|+|..|...
T Consensus 187 ~~~-~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~ 222 (493)
T 1y56_A 187 FDK-GEYFLVPVVRGDKLIEILAKRVVLATGAIDSTM 222 (493)
T ss_dssp EEC-SSSEEEEEEETTEEEEEEESCEEECCCEEECCC
T ss_pred EcC-CcEEEEEEecCCeEEEEECCEEEECCCCCccCC
Confidence 763 3333222224454 689999999999877643
No 202
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.29 E-value=5.6e-06 Score=85.46 Aligned_cols=53 Identities=9% Similarity=0.051 Sum_probs=40.9
Q ss_pred HHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCc-EEecCeEEEecCCCC
Q 018416 85 SYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGN-RLPTDMVVVGIGIRP 139 (356)
Q Consensus 85 ~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~-~i~~D~vi~a~G~~p 139 (356)
..+.+.+++.|++++++++|+++..++++ ..+++.+|+ ++.+|.||+|+|...
T Consensus 416 ~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~--v~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 416 HALMMLAQQNGMTCHYQHELQRLKRIDSQ--WQLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEEECSSS--EEEEEC-CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHHhCCCEEEeCCeEeEEEEeCCe--EEEEeCCCcEEEECCEEEECCCcch
Confidence 33445566789999999999999874444 367778887 899999999999753
No 203
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.29 E-value=6.9e-06 Score=82.48 Aligned_cols=56 Identities=23% Similarity=0.403 Sum_probs=45.1
Q ss_pred HHHHHHHHhC-CCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCc
Q 018416 85 SYYEEYYKSK-GVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 85 ~~~~~~l~~~-GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 141 (356)
+.+.+.+++. ||+++.+ +|++++.++++.+..+++.+|+++.+|.||.|+|..+..
T Consensus 198 ~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 198 DFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLL 254 (550)
T ss_dssp HHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCC
T ss_pred HHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhh
Confidence 3345555667 9999999 999998755677778888899899999999999976644
No 204
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.29 E-value=5e-06 Score=82.73 Aligned_cols=64 Identities=20% Similarity=0.277 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCC-Cc--EEecC-eEEEecCCCC-Cchhhh
Q 018416 82 KIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD-GN--RLPTD-MVVVGIGIRP-NTSLFE 145 (356)
Q Consensus 82 ~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~-g~--~i~~D-~vi~a~G~~p-~~~l~~ 145 (356)
.+...+.+.+++.||++++++.++++..++++++..|...+ ++ ++.+| .||+|+|--. |.++.+
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~n~~m~~ 271 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFAYNDKMIE 271 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChhhCHHHHH
Confidence 45556667777889999999999999875468877776643 32 58996 9999999655 444443
No 205
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.29 E-value=2.7e-06 Score=83.79 Aligned_cols=96 Identities=22% Similarity=0.263 Sum_probs=69.0
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc-------------------------------------cCCH-
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR-------------------------------------LFTP- 81 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~-------------------------------------~~d~- 81 (356)
.+++|||+|+.|+.+|..|++.|.+|+++++.+.+... .++.
T Consensus 6 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~ 85 (478)
T 1v59_A 6 HDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINVA 85 (478)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCHH
Confidence 47999999999999999999999999999996543100 0111
Q ss_pred H-----------HHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCC--cE------EecCeEEEecCCCCC
Q 018416 82 K-----------IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG--NR------LPTDMVVVGIGIRPN 140 (356)
Q Consensus 82 ~-----------~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g--~~------i~~D~vi~a~G~~p~ 140 (356)
+ +...+.+.+++.||+++.++.+.. +++. ..+.+.+| ++ +.+|.+|+|+|.+|.
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~----~~~~-v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~ 158 (478)
T 1v59_A 86 NFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFE----DETK-IRVTPVDGLEGTVKEDHILDVKNIIVATGSEVT 158 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEES----SSSE-EEEECCTTCTTCCSSCEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEc----cCCe-EEEEecCCCcccccccceEEeCEEEECcCCCCC
Confidence 1 112244567788999999876531 2232 35666666 56 999999999998874
No 206
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.28 E-value=2.5e-06 Score=83.82 Aligned_cols=99 Identities=22% Similarity=0.264 Sum_probs=68.9
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc--------------------------cCCc---------cCC-HH
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH--------------------------CMAR---------LFT-PK 82 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~--------------------------~l~~---------~~d-~~ 82 (356)
..+++|||||+.|+.+|..|++.|.+|+++++.+- ..+. .++ ..
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 83 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDRSK 83 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSTTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCHHH
Confidence 46899999999999999999999999999998730 0110 011 11
Q ss_pred HHH-------H-----HHHHHHhC-CCEEEeCCeeeEEEEcCCCcEEEEEeCCC--cEEecCeEEEecCCCCCch
Q 018416 83 IAS-------Y-----YEEYYKSK-GVKFVKGTVLSSFDVDSNGKVVAVNLRDG--NRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 83 ~~~-------~-----~~~~l~~~-GV~v~~~~~v~~i~~~~~g~v~~v~~~~g--~~i~~D~vi~a~G~~p~~~ 142 (356)
+.. . ..+.+++. ||+++.+. +..++ .+. ..+.+.+| +++++|.+|+|+|.+|...
T Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~-~~~~~---~~~-~~v~~~~g~~~~~~~d~lviAtGs~p~~p 153 (467)
T 1zk7_A 84 LLAQQQARVDELRHAKYEGILGGNPAITVVHGE-ARFKD---DQS-LTVRLNEGGERVVMFDRCLVATGASPAVP 153 (467)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEE-EEEEE---TTE-EEEEETTSSEEEEECSEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEE-EEEcc---CCE-EEEEeCCCceEEEEeCEEEEeCCCCCCCC
Confidence 111 1 12445566 99999874 55553 222 45667778 6799999999999887643
No 207
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.28 E-value=7.4e-06 Score=78.91 Aligned_cols=56 Identities=21% Similarity=0.306 Sum_probs=42.9
Q ss_pred HHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchhh
Q 018416 87 YEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLF 144 (356)
Q Consensus 87 ~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~ 144 (356)
+.+.++++|++++++++|++|.. +++.+..|.++ |+++.+|.||+++|......++
T Consensus 202 l~~~~~~~G~~i~~~~~V~~i~~-~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~ll 257 (425)
T 3ka7_A 202 LETVISANGGKIHTGQEVSKILI-ENGKAAGIIAD-DRIHDADLVISNLGHAATAVLC 257 (425)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEET-TEEEECSEEEECSCHHHHHHHT
T ss_pred HHHHHHHcCCEEEECCceeEEEE-ECCEEEEEEEC-CEEEECCEEEECCCHHHHHHhc
Confidence 34556778999999999999987 45666557664 7889999999999965444444
No 208
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.27 E-value=6.3e-06 Score=81.47 Aligned_cols=97 Identities=22% Similarity=0.238 Sum_probs=68.7
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc------------------------------------cCC--
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR------------------------------------LFT-- 80 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~------------------------------------~~d-- 80 (356)
..+|+|||||+.|+.+|..|+++|.+|+|+++.+.+... .++
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 104 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLNLQ 104 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccCHH
Confidence 368999999999999999999999999999987654110 001
Q ss_pred ----------HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCC--cEEecCeEEEecCCCCC
Q 018416 81 ----------PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG--NRLPTDMVVVGIGIRPN 140 (356)
Q Consensus 81 ----------~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g--~~i~~D~vi~a~G~~p~ 140 (356)
..+...+...+++.+|+++.+.... + +.+. ..+.+.+| +++.+|.+|+|+|.+|.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~-~---~~~~-~~v~~~~g~~~~~~~d~lViATGs~p~ 171 (491)
T 3urh_A 105 KMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKV-L---GQGK-VSVTNEKGEEQVLEAKNVVIATGSDVA 171 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE-C---SSSE-EEEECTTSCEEEEECSEEEECCCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-e---cCCE-EEEEeCCCceEEEEeCEEEEccCCCCC
Confidence 0112234455778899999876432 2 2333 35666677 57999999999998864
No 209
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.26 E-value=3.9e-07 Score=98.15 Aligned_cols=94 Identities=21% Similarity=0.346 Sum_probs=73.2
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCC-cEEEEeeCCccC-------Cc-cCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEE
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKI-NVTMVFPEAHCM-------AR-LFTPKIASYYEEYYKSKGVKFVKGTVLSSFDV 109 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~-~Vtlv~~~~~~l-------~~-~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~ 109 (356)
+++|+|||||+.|+.+|..|++.|+ +|+|+++.+.+. +. .++.+..+...+.+++.||++++++.+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~--- 263 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSE--- 263 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBST---
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEcccEecc---
Confidence 4689999999999999999999999 799999987542 11 14566777777889999999999987631
Q ss_pred cCCCcEEEEEeCCCcEEecCeEEEecCC-CCCc
Q 018416 110 DSNGKVVAVNLRDGNRLPTDMVVVGIGI-RPNT 141 (356)
Q Consensus 110 ~~~g~v~~v~~~~g~~i~~D~vi~a~G~-~p~~ 141 (356)
. .+.+.+++++.+|.||+|+|. +|..
T Consensus 264 ---~---~v~~~~~~~~~~d~vvlAtGa~~p~~ 290 (1025)
T 1gte_A 264 ---N---EITLNTLKEEGYKAAFIGIGLPEPKT 290 (1025)
T ss_dssp ---T---SBCHHHHHHTTCCEEEECCCCCEECC
T ss_pred ---c---eEEhhhcCccCCCEEEEecCCCCCCC
Confidence 1 133445556889999999998 4754
No 210
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.25 E-value=2.6e-06 Score=83.84 Aligned_cols=98 Identities=16% Similarity=0.165 Sum_probs=70.0
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc-------------------------------------cCCH-
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR-------------------------------------LFTP- 81 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~-------------------------------------~~d~- 81 (356)
.+++|||||+.|+.+|..|++.|.+|+++++.+.+... .++.
T Consensus 7 ~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 86 (474)
T 1zmd_A 7 ADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLNLD 86 (474)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccCHH
Confidence 47999999999999999999999999999998743110 0111
Q ss_pred H-----------HHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCC-C-cEEecCeEEEecCCCCCch
Q 018416 82 K-----------IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD-G-NRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 82 ~-----------~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~-g-~~i~~D~vi~a~G~~p~~~ 142 (356)
. +...+.+.+++.||+++.++.+ .+. .+. ..+.+.+ + +++.+|.+|+|+|.+|...
T Consensus 87 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~~~---~~~-~~v~~~~gg~~~~~~d~lViAtGs~p~~p 155 (474)
T 1zmd_A 87 KMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGK-ITG---KNQ-VTATKADGGTQVIDTKNILIATGSEVTPF 155 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEE-EEE---TTE-EEEECTTSCEEEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Eec---CCE-EEEEecCCCcEEEEeCEEEECCCCCCCCC
Confidence 1 1112356677889999988653 332 222 3466666 4 5799999999999887653
No 211
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.25 E-value=5.9e-07 Score=89.10 Aligned_cols=99 Identities=20% Similarity=0.363 Sum_probs=71.1
Q ss_pred CCcEEEECCchHHHHHHHHHHHC--CCcEEEEeeCCccC------CccC--CHH--HHHH--------------------
Q 018416 39 GGNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCM------ARLF--TPK--IASY-------------------- 86 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~--G~~Vtlv~~~~~~l------~~~~--d~~--~~~~-------------------- 86 (356)
..+++|||||+.|+.+|..|++. |.+|+|+++.+.+. ...+ ... ..+.
T Consensus 11 ~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (493)
T 1m6i_A 11 HVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPSF 90 (493)
T ss_dssp EEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCGGG
T ss_pred cCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccchHh
Confidence 35799999999999999999887 88999999987531 1000 100 0000
Q ss_pred HH--HH---HHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCc
Q 018416 87 YE--EY---YKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 87 ~~--~~---l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 141 (356)
.. +. +.+.||++++++.+++++.. +. .|.+.+|+++.+|.+|+|+|.+|..
T Consensus 91 ~~~~~~l~~~~~~gv~~~~g~~v~~id~~-~~---~V~~~~g~~i~yd~lviATGs~p~~ 146 (493)
T 1m6i_A 91 YVSAQDLPHIENGGVAVLTGKKVVQLDVR-DN---MVKLNDGSQITYEKCLIATGGTPRS 146 (493)
T ss_dssp SBCTTTTTTSTTCEEEEEETCCEEEEEGG-GT---EEEETTSCEEEEEEEEECCCEEECC
T ss_pred hcchhhhhhhhcCCeEEEcCCEEEEEECC-CC---EEEECCCCEEECCEEEECCCCCCCC
Confidence 00 00 12468999999999999752 22 4677889999999999999998864
No 212
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.24 E-value=1.8e-06 Score=84.59 Aligned_cols=96 Identities=23% Similarity=0.233 Sum_probs=68.0
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc----------------------------------cCCH-H---
Q 018416 41 NAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR----------------------------------LFTP-K--- 82 (356)
Q Consensus 41 ~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~----------------------------------~~d~-~--- 82 (356)
+++|||+|+.|+.+|..|++.|.+|+++++.+.+... .++. +
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 82 (455)
T 2yqu_A 3 DLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPALMA 82 (455)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHHHHH
T ss_pred CEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHHHHH
Confidence 6999999999999999999999999999998643100 0111 1
Q ss_pred --------HHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCch
Q 018416 83 --------IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 83 --------~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 142 (356)
+...+.+.+++.||+++.++.+. + +... ..+.+ +|+++.+|.+|+|+|.+|...
T Consensus 83 ~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~-i---~~~~-~~v~~-~g~~~~~d~lviAtG~~p~~~ 144 (455)
T 2yqu_A 83 HKDKVVQANTQGVEFLFKKNGIARHQGTARF-L---SERK-VLVEE-TGEELEARYILIATGSAPLIP 144 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-S---SSSE-EEETT-TCCEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e---cCCe-EEEee-CCEEEEecEEEECCCCCCCCC
Confidence 11223456677899999887532 2 2232 23444 678899999999999887643
No 213
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.24 E-value=2.9e-07 Score=90.58 Aligned_cols=91 Identities=14% Similarity=0.173 Sum_probs=70.4
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCC--CcEEEEeeCCccC--------Ccc-CCHHHHHHHHHHHHhCCCEEEeCCeeeE
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINK--INVTMVFPEAHCM--------ARL-FTPKIASYYEEYYKSKGVKFVKGTVLSS 106 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G--~~Vtlv~~~~~~l--------~~~-~d~~~~~~~~~~l~~~GV~v~~~~~v~~ 106 (356)
.+++++|||+|+.|+++|..|++.| .+|+++++.+.+. +.. ...++...+.+.+++.||+++.++.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~- 83 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVG- 83 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBT-
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEe-
Confidence 3579999999999999999999998 9999999988765 221 234566777888889999999987662
Q ss_pred EEEcCCCcEEEEEeCCCcEEecCeEEEecCCCC
Q 018416 107 FDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRP 139 (356)
Q Consensus 107 i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p 139 (356)
. .+.+.+ .++.+|.||+|+|..|
T Consensus 84 ------~---~V~~~~-~~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 84 ------R---DVTVQE-LQDAYHAVVLSYGAED 106 (460)
T ss_dssp ------T---TBCHHH-HHHHSSEEEECCCCCE
T ss_pred ------e---EEEecc-ceEEcCEEEEecCcCC
Confidence 1 122333 3478999999999875
No 214
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.23 E-value=1.1e-05 Score=77.15 Aligned_cols=50 Identities=18% Similarity=0.218 Sum_probs=38.2
Q ss_pred HHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCC
Q 018416 86 YYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIR 138 (356)
Q Consensus 86 ~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~ 138 (356)
.+.+.+++.|++++++++|++++.+ ++.+ .+++.++ ++.+|.||+|+|..
T Consensus 158 ~l~~~a~~~Gv~i~~~~~V~~i~~~-~~~v-~v~t~~g-~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 158 ALFTLAQAAGATLRAGETVTELVPD-ADGV-SVTTDRG-TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEEEE-TTEE-EEEESSC-EEEEEEEEECCGGG
T ss_pred HHHHHHHHcCCEEECCCEEEEEEEc-CCeE-EEEECCC-EEEcCEEEEcCCcC
Confidence 3445566789999999999999864 3333 4666554 79999999999975
No 215
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.23 E-value=2.5e-06 Score=84.30 Aligned_cols=93 Identities=17% Similarity=0.248 Sum_probs=68.2
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc-----------------------------------cCC----
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR-----------------------------------LFT---- 80 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~-----------------------------------~~d---- 80 (356)
.+|+|||||+.|+.+|..|+++|.+|+|+++.. +... .++
T Consensus 27 ~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~-~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~ 105 (484)
T 3o0h_A 27 FDLFVIGSGSGGVRAARLAGALGKRVAIAEEYR-IGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWEKL 105 (484)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHhCcCEEEEEeCCC-CCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCHHHH
Confidence 479999999999999999999999999999842 1100 011
Q ss_pred --------HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeC-CCcEEecCeEEEecCCCCC
Q 018416 81 --------PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR-DGNRLPTDMVVVGIGIRPN 140 (356)
Q Consensus 81 --------~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~-~g~~i~~D~vi~a~G~~p~ 140 (356)
..+...+...+++.||+++.+ .+..+. .. .+.+. +++++.+|.+++|+|.+|.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~---~~---~v~v~~~~~~~~~d~lviAtG~~p~ 167 (484)
T 3o0h_A 106 VAAKNKEISRLEGLYREGLQNSNVHIYES-RAVFVD---EH---TLELSVTGERISAEKILIATGAKIV 167 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEE---TT---EEEETTTCCEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEee---CC---EEEEecCCeEEEeCEEEEccCCCcc
Confidence 123334556677889999987 344443 22 34555 7889999999999998876
No 216
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.22 E-value=4.7e-06 Score=81.72 Aligned_cols=93 Identities=19% Similarity=0.204 Sum_probs=66.7
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC--------------------------------Cc------cCCH
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM--------------------------------AR------LFTP 81 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l--------------------------------~~------~~d~ 81 (356)
.+++|||||+.|+.+|..|++.|.+|+++++. .+. .. .++.
T Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 84 (458)
T 1lvl_A 6 TTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ-ALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPRLDI 84 (458)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCCCCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCEEEEEccC-CCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCccCH
Confidence 58999999999999999999999999999984 321 00 0111
Q ss_pred -HH-----------HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCc
Q 018416 82 -KI-----------ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 82 -~~-----------~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 141 (356)
++ ...+.+.+++.||+++.++.+. +. +. .+.+.+ +++++|.+|+|+|.+|..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~-~~---~~---~v~v~~-~~~~~d~lviATGs~p~~ 148 (458)
T 1lvl_A 85 GQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKV-LD---GK---QVEVDG-QRIQCEHLLLATGSSSVE 148 (458)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEE-EE---TT---EEEETT-EEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEE-cc---CC---EEEEee-EEEEeCEEEEeCCCCCCC
Confidence 11 1123456778999999887643 32 22 355555 789999999999998864
No 217
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.21 E-value=5.3e-06 Score=81.81 Aligned_cols=97 Identities=22% Similarity=0.246 Sum_probs=69.5
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC---------------------------------------C--cc
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM---------------------------------------A--RL 78 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l---------------------------------------~--~~ 78 (356)
.+++|||||+.|+.+|..|++.|.+|+|+++.+ +. + ..
T Consensus 12 ~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 90 (479)
T 2hqm_A 12 YDYLVIGGGSGGVASARRAASYGAKTLLVEAKA-LGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEHLT 90 (479)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGGCC
T ss_pred CCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC-cCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccccccccCc
Confidence 579999999999999999999999999999874 10 0 00
Q ss_pred CCH------------HHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCc--EEecCeEEEecCCCCCch
Q 018416 79 FTP------------KIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGN--RLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 79 ~d~------------~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~--~i~~D~vi~a~G~~p~~~ 142 (356)
++. .+...+.+.+++.||+++.++ ++.+ +... ..+.+.+|+ ++.+|.+++|+|.+|...
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i---~~~~-~~v~~~~g~~~~~~~d~lviAtGs~p~~p 163 (479)
T 2hqm_A 91 FNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGW-ARFN---KDGN-VEVQKRDNTTEVYSANHILVATGGKAIFP 163 (479)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEE-EEEC---TTSC-EEEEESSSCCEEEEEEEEEECCCEEECCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEe---eCCE-EEEEeCCCcEEEEEeCEEEEcCCCCCCCC
Confidence 111 112234456678899999874 4444 2333 346667776 799999999999887654
No 218
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.21 E-value=2.6e-06 Score=83.76 Aligned_cols=94 Identities=24% Similarity=0.397 Sum_probs=67.1
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc-----------------------------------cCCH---
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR-----------------------------------LFTP--- 81 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~-----------------------------------~~d~--- 81 (356)
.+++|||||+.|+.+|..|++.|.+|+++++.+ +... .++.
T Consensus 5 ~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~ 83 (463)
T 2r9z_A 5 FDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA-LGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDWPRL 83 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC-CCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCHHHH
Confidence 579999999999999999999999999999873 2100 0111
Q ss_pred ---------HHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCch
Q 018416 82 ---------KIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 82 ---------~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 142 (356)
.+...+.+.+++.||+++.+.. ..+. .. .+.+ +|+++.+|.+|+|+|.+|...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~-~~i~---~~---~v~~-~g~~~~~d~lviAtGs~p~~p 145 (463)
T 2r9z_A 84 VAGRDRYIGAINSFWDGYVERLGITRVDGHA-RFVD---AH---TIEV-EGQRLSADHIVIATGGRPIVP 145 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEESCE-EEEE---TT---EEEE-TTEEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEEEeEE-EEcc---CC---EEEE-CCEEEEcCEEEECCCCCCCCC
Confidence 1122234456788999998853 3343 22 3444 678899999999999887643
No 219
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.21 E-value=5.1e-06 Score=81.48 Aligned_cols=96 Identities=18% Similarity=0.169 Sum_probs=69.2
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc-----------------------------------cCCH---
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR-----------------------------------LFTP--- 81 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~-----------------------------------~~d~--- 81 (356)
.+++|||+|+.|+.+|..|++.|.+|+++++.+ +... .++.
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~-~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 82 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY-WGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGIA 82 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHHHH
Confidence 379999999999999999999999999999872 2100 0011
Q ss_pred ---------HHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCC--cEEecCeEEEecCCCCCc
Q 018416 82 ---------KIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG--NRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 82 ---------~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g--~~i~~D~vi~a~G~~p~~ 141 (356)
.+...+.+.+++.||+++.++.+. + +++. ..+.+.+| +++.+|.+|+|+|.+|..
T Consensus 83 ~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~-i---d~~~-v~V~~~~G~~~~~~~d~lViAtG~~~~~ 148 (464)
T 2a8x_A 83 YDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF-A---DANT-LLVDLNDGGTESVTFDNAIIATGSSTRL 148 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE-S---SSSE-EEEEETTSCCEEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e---cCCe-EEEEeCCCceEEEEcCEEEECCCCCCCC
Confidence 111224566778899999887543 2 2333 35667777 689999999999988754
No 220
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.21 E-value=5.4e-06 Score=82.20 Aligned_cols=101 Identities=21% Similarity=0.268 Sum_probs=71.3
Q ss_pred CcEEEECCchHHHHHHHHHHHC---CCcEEEEeeCCccCC-----------------------------c--------cC
Q 018416 40 GNAVVIGGGYIGMECAASLVIN---KINVTMVFPEAHCMA-----------------------------R--------LF 79 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~---G~~Vtlv~~~~~~l~-----------------------------~--------~~ 79 (356)
.+++|||||+.|+.+|..|+++ |.+|+|+++.+ +.. . .+
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 81 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAKI 81 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------CB
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCcc
Confidence 4799999999999999999999 99999999985 100 0 01
Q ss_pred CHH------------HHHHHHHHHHhCCCEEEeCCeeeEEEEcC--CCcEEEEEeCCCc--EEecCeEEEecCCCCCch
Q 018416 80 TPK------------IASYYEEYYKSKGVKFVKGTVLSSFDVDS--NGKVVAVNLRDGN--RLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 80 d~~------------~~~~~~~~l~~~GV~v~~~~~v~~i~~~~--~g~v~~v~~~~g~--~i~~D~vi~a~G~~p~~~ 142 (356)
+.. +...+.+.+++.||+++.++ ++.+...+ ++....+.+.+|+ ++.+|.+++|+|.+|...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p~~p 159 (499)
T 1xdi_A 82 SLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGR-GELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRIL 159 (499)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEECCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCC
Confidence 111 22234667788999999886 55443200 0123456667776 799999999999888653
No 221
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.21 E-value=4e-06 Score=89.72 Aligned_cols=100 Identities=13% Similarity=0.119 Sum_probs=72.7
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCcc-------C----CHHHHHHHHHHHHhC-CCEEEeCCeeeEE
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARL-------F----TPKIASYYEEYYKSK-GVKFVKGTVLSSF 107 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~-------~----d~~~~~~~~~~l~~~-GV~v~~~~~v~~i 107 (356)
.+|+|||+|+.|+.+|..|++.|.+|+|+++.+.+.... + ..+....+.+.+.+. +|++++++.+.++
T Consensus 129 ~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~i 208 (965)
T 2gag_A 129 TDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTVFGS 208 (965)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEEEee
Confidence 579999999999999999999999999999987642111 1 234445555667664 9999999999888
Q ss_pred EEcCCCcEEEEEe---------------CCCcEEecCeEEEecCCCCCc
Q 018416 108 DVDSNGKVVAVNL---------------RDGNRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 108 ~~~~~g~v~~v~~---------------~~g~~i~~D~vi~a~G~~p~~ 141 (356)
.. ++.+..+.. .++.++.+|.+|+|+|.+|..
T Consensus 209 ~~--~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~ 255 (965)
T 2gag_A 209 YD--ANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERP 255 (965)
T ss_dssp ET--TTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECC
T ss_pred ec--CCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCC
Confidence 63 333222221 112368999999999987654
No 222
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.21 E-value=2.2e-06 Score=82.63 Aligned_cols=97 Identities=20% Similarity=0.212 Sum_probs=69.9
Q ss_pred CcEEEECCchHHHHHHHHHHHC--CCcEEEEeeCCc------------c-CCccC-------------------------
Q 018416 40 GNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAH------------C-MARLF------------------------- 79 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~--G~~Vtlv~~~~~------------~-l~~~~------------------------- 79 (356)
.+|+|||+|.+|+.+|..|+++ |.+|+|+++.+. + .+..+
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 116 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSGKTL 116 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSSCCC
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCCCCC
Confidence 4799999999999999999999 999999998531 2 01000
Q ss_pred --------------------C----------------------------------HHHHHHHHHHHHhCCCEEEeCCeee
Q 018416 80 --------------------T----------------------------------PKIASYYEEYYKSKGVKFVKGTVLS 105 (356)
Q Consensus 80 --------------------d----------------------------------~~~~~~~~~~l~~~GV~v~~~~~v~ 105 (356)
+ ..+...+.+.+++.|++++.+++|+
T Consensus 117 ~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~ 196 (405)
T 3c4n_A 117 EVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAGLLLNTRAE 196 (405)
T ss_dssp CEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCEEECSCEEE
T ss_pred cEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCCEEE
Confidence 0 1245566677788999999999998
Q ss_pred ---------EEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCC
Q 018416 106 ---------SFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRP 139 (356)
Q Consensus 106 ---------~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p 139 (356)
++.. +++.+ .+.+.+| ++.+|.||+|+|...
T Consensus 197 ~~~g~~~~~~i~~-~~~~v-~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 197 LVPGGVRLHRLTV-TNTHQ-IVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp EETTEEEEECBCC---------CBCCE-EEEEEEEEECCGGGH
T ss_pred eccccccccceEe-eCCeE-EEEECCc-EEECCEEEECCCccH
Confidence 7764 23444 5666665 899999999999754
No 223
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.21 E-value=2e-06 Score=82.34 Aligned_cols=98 Identities=14% Similarity=0.151 Sum_probs=71.0
Q ss_pred CCcEEEECCchHHHHHHHHHHHCC--CcEEEEeeCCccC------CccC----C-HHHHH-HHHHHHHhCCCEEEeCCee
Q 018416 39 GGNAVVIGGGYIGMECAASLVINK--INVTMVFPEAHCM------ARLF----T-PKIAS-YYEEYYKSKGVKFVKGTVL 104 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G--~~Vtlv~~~~~~l------~~~~----d-~~~~~-~~~~~l~~~GV~v~~~~~v 104 (356)
..+++|||+|+.|+.+|..|++.| .+|+++++.+... +..+ . .++.. .+.+.+++.||+++.++.+
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v 83 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILTHTRV 83 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEEECSCCC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEEEeCCEE
Confidence 368999999999999999999998 5689998875321 1111 1 12211 2355567889999999999
Q ss_pred eEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCc
Q 018416 105 SSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 105 ~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 141 (356)
+.+..+ +. .+.+. +.++.+|.+++|+|.+|..
T Consensus 84 ~~i~~~-~~---~v~~~-~~~~~~d~lviAtG~~p~~ 115 (384)
T 2v3a_A 84 TGIDPG-HQ---RIWIG-EEEVRYRDLVLAWGAEPIR 115 (384)
T ss_dssp CEEEGG-GT---EEEET-TEEEECSEEEECCCEEECC
T ss_pred EEEECC-CC---EEEEC-CcEEECCEEEEeCCCCcCC
Confidence 988752 22 34454 4579999999999988764
No 224
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.20 E-value=1.1e-05 Score=77.71 Aligned_cols=54 Identities=19% Similarity=0.331 Sum_probs=41.2
Q ss_pred HHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCchhh
Q 018416 87 YEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLF 144 (356)
Q Consensus 87 ~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~ 144 (356)
+.+.++++|++++++++|++++. +++.+ + +.+|+++++|.||+++|......++
T Consensus 195 l~~~~~~~G~~i~~~~~V~~i~~-~~~~v--V-~~~g~~~~ad~Vv~a~~~~~~~~ll 248 (421)
T 3nrn_A 195 LERIIMENKGKILTRKEVVEINI-EEKKV--Y-TRDNEEYSFDVAISNVGVRETVKLI 248 (421)
T ss_dssp HHHHHHTTTCEEESSCCEEEEET-TTTEE--E-ETTCCEEECSEEEECSCHHHHHHHH
T ss_pred HHHHHHHCCCEEEcCCeEEEEEE-ECCEE--E-EeCCcEEEeCEEEECCCHHHHHHhc
Confidence 34455678999999999999986 44544 4 5678899999999999965444444
No 225
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.19 E-value=4.2e-06 Score=82.63 Aligned_cols=97 Identities=19% Similarity=0.205 Sum_probs=68.3
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCC-----------------------------------ccCCHH--
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA-----------------------------------RLFTPK-- 82 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~-----------------------------------~~~d~~-- 82 (356)
.+++|||+|+.|+.+|..|++.|.+|+|+++.+.+.. ..++.+
T Consensus 7 ~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~~~ 86 (482)
T 1ojt_A 7 YDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDML 86 (482)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHHHH
Confidence 4799999999999999999999999999999654310 001111
Q ss_pred ----------HHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCC------------cEEecCeEEEecCCCCC
Q 018416 83 ----------IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG------------NRLPTDMVVVGIGIRPN 140 (356)
Q Consensus 83 ----------~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g------------~~i~~D~vi~a~G~~p~ 140 (356)
+...+.+.+++.||+++.++.+. + +++. ..+.+.+| .++.+|.+|+|+|.+|.
T Consensus 87 ~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~---~~~~-v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~ 161 (482)
T 1ojt_A 87 RAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF-L---DPHH-LEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVT 161 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE-E---ETTE-EEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE-c---cCCE-EEEEecCCcccccccccCcceEEEcCEEEECCCCCCC
Confidence 11123456678899999887543 2 2232 33444455 67999999999998876
Q ss_pred c
Q 018416 141 T 141 (356)
Q Consensus 141 ~ 141 (356)
.
T Consensus 162 ~ 162 (482)
T 1ojt_A 162 K 162 (482)
T ss_dssp C
T ss_pred C
Confidence 4
No 226
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.19 E-value=2e-06 Score=85.31 Aligned_cols=95 Identities=19% Similarity=0.327 Sum_probs=61.1
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC---------Cc-------------------------cCC-----
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM---------AR-------------------------LFT----- 80 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l---------~~-------------------------~~d----- 80 (356)
.+++|||||+.|+.+|..|++.|.+|+++++.+ +. |. .++
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~ 81 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARHNAKVALVEKSR-LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLPLLV 81 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHHHHH
T ss_pred cCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-cCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHHHHH
Confidence 479999999999999999999999999999984 10 00 011
Q ss_pred -------HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCC-------------CcEEecCeEEEecCCCCC
Q 018416 81 -------PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD-------------GNRLPTDMVVVGIGIRPN 140 (356)
Q Consensus 81 -------~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~-------------g~~i~~D~vi~a~G~~p~ 140 (356)
..+...+.+.+++.||+++.++.+ .++ .. .+.+.+ ++++.+|.+|+|+|.+|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~-~id---~~---~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~ 154 (500)
T 1onf_A 82 ERRDKYIQRLNNIYRQNLSKDKVDLYEGTAS-FLS---EN---RILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPV 154 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEEESCCC-CC--------------------------------CBSSEEECCCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEEeEEE-Eee---CC---EEEEEeccccccccccCCCceEEEeCEEEECCCCCCC
Confidence 112223445567889999988643 232 11 222322 567999999999999887
Q ss_pred ch
Q 018416 141 TS 142 (356)
Q Consensus 141 ~~ 142 (356)
..
T Consensus 155 ~p 156 (500)
T 1onf_A 155 FP 156 (500)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 227
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.19 E-value=5.1e-06 Score=81.27 Aligned_cols=94 Identities=19% Similarity=0.352 Sum_probs=67.0
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc------------------------------------cCCH--
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR------------------------------------LFTP-- 81 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~------------------------------------~~d~-- 81 (356)
.+++|||||+.|+.+|..|++.|.+|+++++.+ +... .++.
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~~~~ 83 (450)
T 1ges_A 5 YDYIAIGGGSGGIASINRAAMYGQKCALIEAKE-LGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWET 83 (450)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEECHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC-CCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccCHHH
Confidence 579999999999999999999999999999873 2100 0110
Q ss_pred ----------HHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCch
Q 018416 82 ----------KIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 82 ----------~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 142 (356)
.+...+...+++.||+++.++. +.++ .. .+.+ +|+++.+|.+++|+|.+|...
T Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~-~~i~---~~---~v~~-~g~~~~~d~lviAtGs~p~~p 146 (450)
T 1ges_A 84 LIASRTAYIDRIHTSYENVLGKNNVDVIKGFA-RFVD---AK---TLEV-NGETITADHILIATGGRPSHP 146 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESCC-EEEE---TT---EEEE-TTEEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEE-EEec---CC---EEEE-CCEEEEeCEEEECCCCCCCCC
Confidence 1112233456778999998864 3443 22 3444 678899999999999887643
No 228
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.18 E-value=1.8e-06 Score=88.81 Aligned_cols=87 Identities=21% Similarity=0.320 Sum_probs=67.2
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc-----cC----C-HHHHHHHHHHHHhCCCEEEeCCeeeEEE
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR-----LF----T-PKIASYYEEYYKSKGVKFVKGTVLSSFD 108 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~-----~~----d-~~~~~~~~~~l~~~GV~v~~~~~v~~i~ 108 (356)
.++|+|||||+.|+.+|..|+++|.+|+|+++.+.+... .+ + .+....+.+.+++.||++++++.++.
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~-- 450 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTA-- 450 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCS--
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEecH--
Confidence 478999999999999999999999999999998765211 01 1 23455667778889999999876431
Q ss_pred EcCCCcEEEEEeCCCcEE-ecCeEEEecCCCCCch
Q 018416 109 VDSNGKVVAVNLRDGNRL-PTDMVVVGIGIRPNTS 142 (356)
Q Consensus 109 ~~~~g~v~~v~~~~g~~i-~~D~vi~a~G~~p~~~ 142 (356)
..+ .+|.||+|+|.+|...
T Consensus 451 ---------------~~~~~~d~lviAtG~~p~~~ 470 (671)
T 1ps9_A 451 ---------------DQLQAFDETILASGIVPRTP 470 (671)
T ss_dssp ---------------SSSCCSSEEEECCCEEECCC
T ss_pred ---------------HHhhcCCEEEEccCCCcCCC
Confidence 123 8999999999987653
No 229
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.18 E-value=2.7e-06 Score=83.57 Aligned_cols=94 Identities=19% Similarity=0.221 Sum_probs=67.2
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCC----------------------------------ccCCHH-H-
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA----------------------------------RLFTPK-I- 83 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~----------------------------------~~~d~~-~- 83 (356)
.+++|||+|+.|+.+|..|++.|.+|+++++.+ +.. ..++.. +
T Consensus 7 ~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 85 (464)
T 2eq6_A 7 YDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKLG 85 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHHHHH
Confidence 579999999999999999999999999999875 100 001111 1
Q ss_pred ----------HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCch
Q 018416 84 ----------ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 84 ----------~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 142 (356)
...+.+.+++.||+++.++.+. +. .. .+.+. |+++++|.+|+|+|.+|...
T Consensus 86 ~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~---~~---~v~v~-g~~~~~d~lViATGs~p~~p 146 (464)
T 2eq6_A 86 GWRDQVVKKLTGGVGTLLKGNGVELLRGFARL-VG---PK---EVEVG-GERYGAKSLILATGSEPLEL 146 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEEESCEEE-EE---TT---EEEET-TEEEEEEEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEE-cc---CC---EEEEc-cEEEEeCEEEEcCCCCCCCC
Confidence 1113455677899999987543 32 22 34444 67899999999999887643
No 230
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.18 E-value=3.1e-07 Score=90.31 Aligned_cols=90 Identities=18% Similarity=0.168 Sum_probs=69.6
Q ss_pred CCCcEEEECCchHHHHHHHHHHH-C------CCcEEEEeeCCccCC--------c-cCCHHHHHHHHHHHHhCCCEEEeC
Q 018416 38 SGGNAVVIGGGYIGMECAASLVI-N------KINVTMVFPEAHCMA--------R-LFTPKIASYYEEYYKSKGVKFVKG 101 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~-~------G~~Vtlv~~~~~~l~--------~-~~d~~~~~~~~~~l~~~GV~v~~~ 101 (356)
.+++|+|||+|+.|+.+|..|++ . |.+|+|+++.+.+.. . ....++...+.+.+++.||+++.+
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~ 81 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGN 81 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEES
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEee
Confidence 35789999999999999999999 7 999999999877542 1 123456777788888899999988
Q ss_pred CeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCC
Q 018416 102 TVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIR 138 (356)
Q Consensus 102 ~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~ 138 (356)
..+ + . .+.+.++ ++.+|.||+|+|..
T Consensus 82 v~v------~-~---~v~~~~~-~~~~d~lViAtG~~ 107 (456)
T 1lqt_A 82 VVV------G-E---HVQPGEL-SERYDAVIYAVGAQ 107 (456)
T ss_dssp CCB------T-T---TBCHHHH-HHHSSEEEECCCCC
T ss_pred EEE------C-C---EEEECCC-eEeCCEEEEeeCCC
Confidence 553 1 1 1334444 57899999999986
No 231
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.17 E-value=2.6e-05 Score=77.75 Aligned_cols=56 Identities=11% Similarity=0.207 Sum_probs=44.1
Q ss_pred HHHHHHHHh-CCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCc
Q 018416 85 SYYEEYYKS-KGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 85 ~~~~~~l~~-~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 141 (356)
+.+.+.+++ .||+++.+ +|++++.++++.+..+++.+|.++.+|.||.|.|..+..
T Consensus 179 ~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 179 QLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLL 235 (526)
T ss_dssp HHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCC
T ss_pred HHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 334455566 89999999 699998755666667888888889999999999987653
No 232
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.17 E-value=1.1e-05 Score=84.93 Aligned_cols=55 Identities=27% Similarity=0.432 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCC
Q 018416 83 IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRP 139 (356)
Q Consensus 83 ~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p 139 (356)
+...+.+.++++|++++.++.|++++. +++.+..+.+.+| ++.+|.||+|+|...
T Consensus 153 l~~~L~~~a~~~Gv~i~~~t~V~~i~~-~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 153 AVQLLIKRTESAGVTYRGSTTVTGIEQ-SGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHcCCEEECCceEEEEEE-eCCEEEEEEECCc-EEECCEEEECCccch
Confidence 344556677788999999999999986 3555656777777 799999999999653
No 233
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.17 E-value=8.1e-07 Score=91.76 Aligned_cols=89 Identities=18% Similarity=0.216 Sum_probs=69.2
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCC---------cc-CCHHHHHHHHHHHHhC-CCEEEeCCeeeE
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA---------RL-FTPKIASYYEEYYKSK-GVKFVKGTVLSS 106 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~---------~~-~d~~~~~~~~~~l~~~-GV~v~~~~~v~~ 106 (356)
..++|+|||||+.|+++|..|+++|++|+|+++.+.+.. .. ...++...+.+.+++. ||++++++.++
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~- 468 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRESPMT- 468 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEESSCCCC-
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEEECCeec-
Confidence 357899999999999999999999999999999875421 10 1245667777888887 99999886532
Q ss_pred EEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCC
Q 018416 107 FDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPN 140 (356)
Q Consensus 107 i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~ 140 (356)
..+++++.+|.+++|+|.+|.
T Consensus 469 -------------~~~~~~~~~d~lvlAtG~~~~ 489 (690)
T 3k30_A 469 -------------GDDIVEFGFEHVITATGATWR 489 (690)
T ss_dssp -------------HHHHHHTTCCEEEECCCEEEC
T ss_pred -------------HHHHhhcCCCEEEEcCCCccc
Confidence 123456889999999998854
No 234
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.17 E-value=1.7e-05 Score=78.70 Aligned_cols=56 Identities=23% Similarity=0.370 Sum_probs=45.3
Q ss_pred HHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCc
Q 018416 85 SYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 85 ~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 141 (356)
+.+.+.+++.||+++.+ +|++++.++++.+..+++.+|+++.+|.||.|.|.....
T Consensus 177 ~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 177 RYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLL 232 (511)
T ss_dssp HHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 34455666789999999 999998756677777888899899999999999986543
No 235
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.12 E-value=2.7e-06 Score=83.46 Aligned_cols=93 Identities=17% Similarity=0.245 Sum_probs=66.9
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCC---------------------------c--------cCCH---
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA---------------------------R--------LFTP--- 81 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~---------------------------~--------~~d~--- 81 (356)
.+|+|||+|+.|+.+|..|+++|.+|+++++.. +.. . .++.
T Consensus 6 ~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~~-~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 84 (463)
T 4dna_A 6 YDLFVIGGGSGGVRSGRLAAALGKKVAIAEEFR-YGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWAKL 84 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHHHH
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHHHH
Confidence 479999999999999999999999999999842 110 0 0111
Q ss_pred ---------HHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEe-CCCcEEecCeEEEecCCCCC
Q 018416 82 ---------KIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNL-RDGNRLPTDMVVVGIGIRPN 140 (356)
Q Consensus 82 ---------~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~-~~g~~i~~D~vi~a~G~~p~ 140 (356)
.+...+.+.+++.||+++.+ .+..+ +.. .+.+ .+++++.+|.+++|+|.+|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i---~~~---~v~~~~~~~~~~~d~lviAtG~~p~ 146 (463)
T 4dna_A 85 VAAKEQEIARLEGLYRKGLANAGAEILDT-RAELA---GPN---TVKLLASGKTVTAERIVIAVGGHPS 146 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCEEEES-CEEES---SSS---EEEETTTTEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEe---eCC---EEEEecCCeEEEeCEEEEecCCCcc
Confidence 22333455667789999987 33333 222 3455 57788999999999998877
No 236
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.09 E-value=2.5e-05 Score=77.46 Aligned_cols=55 Identities=15% Similarity=0.082 Sum_probs=42.0
Q ss_pred HHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEe---CCCc--EEecCeEEEecCCCC
Q 018416 83 IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNL---RDGN--RLPTDMVVVGIGIRP 139 (356)
Q Consensus 83 ~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~---~~g~--~i~~D~vi~a~G~~p 139 (356)
+...+.+.++++|++++++++|+++..++ .+..+++ .+|+ ++.+|.||.|+|...
T Consensus 151 l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 151 LVLANAQMVVRKGGEVLTRTRATSARREN--GLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHcCCEEEcCcEEEEEEEeC--CEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 44556667778899999999999998633 4455666 3565 799999999999754
No 237
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.08 E-value=1.1e-05 Score=79.33 Aligned_cols=97 Identities=21% Similarity=0.237 Sum_probs=68.1
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC----------------------------------Cc--------
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM----------------------------------AR-------- 77 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l----------------------------------~~-------- 77 (356)
-+++|||+|+.|+.+|..|++.|.+|+|+++.+.+. ..
T Consensus 4 ~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~~~ 83 (476)
T 3lad_A 4 FDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTGEV 83 (476)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECSCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 479999999999999999999999999999985110 00
Q ss_pred cCC------------HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCC--cEEecCeEEEecCCCCCc
Q 018416 78 LFT------------PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG--NRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 78 ~~d------------~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g--~~i~~D~vi~a~G~~p~~ 141 (356)
.++ ..+...+...+++.||+++.+.... + +.+. ..+.+.+| +++.+|.+|+|+|.+|..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~-~---~~~~-~~v~~~~g~~~~~~~d~lvlAtG~~p~~ 156 (476)
T 3lad_A 84 AIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKL-L---AGKK-VEVTAADGSSQVLDTENVILASGSKPVE 156 (476)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEE-C---STTC-EEEECTTSCEEEECCSCEEECCCEEECC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e---cCCE-EEEEcCCCceEEEEcCEEEEcCCCCCCC
Confidence 001 0112223455677899999876432 2 2333 35666777 579999999999988763
No 238
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.08 E-value=5.1e-06 Score=82.24 Aligned_cols=98 Identities=23% Similarity=0.261 Sum_probs=66.6
Q ss_pred CcEEEECCchHHHHHHHHHHH-CCCcEEEEee--------CCccCCc---------------------------------
Q 018416 40 GNAVVIGGGYIGMECAASLVI-NKINVTMVFP--------EAHCMAR--------------------------------- 77 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~-~G~~Vtlv~~--------~~~~l~~--------------------------------- 77 (356)
.+++|||||+.|+.+|..|++ .|.+|+|+++ .+.+...
T Consensus 4 ~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~ 83 (490)
T 1fec_A 4 YDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWELD 83 (490)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEECC
T ss_pred ccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCcccC
Confidence 479999999999999999999 9999999992 2222110
Q ss_pred ----cCCH-HH-----------HHHHHHHHHhC-CCEEEeCCeeeEEEEcCCCcEEEEEe---CCC---cEEecCeEEEe
Q 018416 78 ----LFTP-KI-----------ASYYEEYYKSK-GVKFVKGTVLSSFDVDSNGKVVAVNL---RDG---NRLPTDMVVVG 134 (356)
Q Consensus 78 ----~~d~-~~-----------~~~~~~~l~~~-GV~v~~~~~v~~i~~~~~g~v~~v~~---~~g---~~i~~D~vi~a 134 (356)
.++. ++ ...+.+.+++. ||+++.++ ++.+. ... ..+.. .+| +++.+|.+|+|
T Consensus 84 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~-~~~i~---~~~-v~v~~~~~~~g~~~~~~~~d~lviA 158 (490)
T 1fec_A 84 RESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGF-GALQD---NHT-VLVRESADPNSAVLETLDTEYILLA 158 (490)
T ss_dssp GGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESE-EEEEE---TTE-EEEESSSSTTSCEEEEEEEEEEEEC
T ss_pred CcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeE-EEEee---CCE-EEEEeeccCCCCceEEEEcCEEEEe
Confidence 0121 11 12334456778 99999886 55553 222 22332 266 67999999999
Q ss_pred cCCCCCch
Q 018416 135 IGIRPNTS 142 (356)
Q Consensus 135 ~G~~p~~~ 142 (356)
+|.+|...
T Consensus 159 tGs~p~~p 166 (490)
T 1fec_A 159 TGSWPQHL 166 (490)
T ss_dssp CCEEECCC
T ss_pred CCCCCCCC
Confidence 99887643
No 239
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.06 E-value=2.3e-05 Score=77.26 Aligned_cols=98 Identities=18% Similarity=0.273 Sum_probs=71.0
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC-------------Ccc-----------------------------
Q 018416 41 NAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM-------------ARL----------------------------- 78 (356)
Q Consensus 41 ~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l-------------~~~----------------------------- 78 (356)
.|+|||+|..|+.+|..|++.|.+|+|+++...-. ...
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~~ 80 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKRIDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTSE 80 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHHH
Confidence 48999999999999999999999999999872000 000
Q ss_pred --------------C----------------------CHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeC-
Q 018416 79 --------------F----------------------TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR- 121 (356)
Q Consensus 79 --------------~----------------------d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~- 121 (356)
+ ..++.+.+.+.+++.||+++.++.+ ++.. +++.+..+...
T Consensus 81 ~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~-~~~~v~Gv~v~~ 158 (472)
T 2e5v_A 81 AKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRV-KDGKVTGFVTEK 158 (472)
T ss_dssp HHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEE-ETTEEEEEEETT
T ss_pred HHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEE-eCCEEEEEEEEe
Confidence 0 0133455556667789999999999 9875 35666555543
Q ss_pred CCcEEecCeEEEecCCCCC
Q 018416 122 DGNRLPTDMVVVGIGIRPN 140 (356)
Q Consensus 122 ~g~~i~~D~vi~a~G~~p~ 140 (356)
++.++.+|.||+|+|..+.
T Consensus 159 ~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 159 RGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp TEEECCCSEEEECCCCCGG
T ss_pred CCCeEEeeeEEECCCCCcc
Confidence 3335789999999997653
No 240
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.05 E-value=4.5e-06 Score=82.79 Aligned_cols=96 Identities=26% Similarity=0.282 Sum_probs=65.4
Q ss_pred CcEEEECCchHHHHHHHHHHH-CCCcEEEEee--------CCccCCc---------------------------------
Q 018416 40 GNAVVIGGGYIGMECAASLVI-NKINVTMVFP--------EAHCMAR--------------------------------- 77 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~-~G~~Vtlv~~--------~~~~l~~--------------------------------- 77 (356)
.+++|||||+.|+.+|..|++ .|.+|+|+++ .+.+...
T Consensus 8 ~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~ 87 (495)
T 2wpf_A 8 FDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEFD 87 (495)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEECC
T ss_pred cCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCcccC
Confidence 479999999999999999999 9999999992 2222100
Q ss_pred ----cCCH-HHH-----------HHHHHHHHhC-CCEEEeCCeeeEEEEcCCCcEEEEEeC---C-----CcEEecCeEE
Q 018416 78 ----LFTP-KIA-----------SYYEEYYKSK-GVKFVKGTVLSSFDVDSNGKVVAVNLR---D-----GNRLPTDMVV 132 (356)
Q Consensus 78 ----~~d~-~~~-----------~~~~~~l~~~-GV~v~~~~~v~~i~~~~~g~v~~v~~~---~-----g~~i~~D~vi 132 (356)
.++. ++. ..+...|++. ||+++.++ ++.+. .. .+.+. + ++++.+|.+|
T Consensus 88 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~-~~~i~---~~---~v~v~~~~~~~~~~~~~~~~d~lV 160 (495)
T 2wpf_A 88 GSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGW-GSLES---KN---VVVVRETADPKSAVKERLQADHIL 160 (495)
T ss_dssp GGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESE-EEEEE---TT---EEEEESSSSTTSCEEEEEEEEEEE
T ss_pred CcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeE-EEEee---CC---EEEEeecCCccCCCCeEEEcCEEE
Confidence 0111 111 1233456677 99999885 44443 22 23333 4 6789999999
Q ss_pred EecCCCCCch
Q 018416 133 VGIGIRPNTS 142 (356)
Q Consensus 133 ~a~G~~p~~~ 142 (356)
+|+|.+|...
T Consensus 161 iATGs~p~~p 170 (495)
T 2wpf_A 161 LATGSWPQMP 170 (495)
T ss_dssp ECCCEEECCC
T ss_pred EeCCCCcCCC
Confidence 9999887643
No 241
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.00 E-value=2.5e-05 Score=78.69 Aligned_cols=53 Identities=23% Similarity=0.185 Sum_probs=40.7
Q ss_pred HHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCC---C--cEEecCeEEEecCCC
Q 018416 85 SYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD---G--NRLPTDMVVVGIGIR 138 (356)
Q Consensus 85 ~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~---g--~~i~~D~vi~a~G~~ 138 (356)
..+.+.++++|++++++++|+++.. +++.+..+++.+ | .++.+|.||.|+|..
T Consensus 174 ~~L~~~a~~~G~~i~~~~~V~~l~~-~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~ 231 (561)
T 3da1_A 174 LEIMKEAVARGAVALNYMKVESFIY-DQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPW 231 (561)
T ss_dssp HHHHHHHHHTTCEEEESEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHcCCEEEcCCEEEEEEE-cCCeEEEEEEEEcCCCceEEEECCEEEECCCcc
Confidence 3445567788999999999999987 456665666643 3 468999999999964
No 242
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.00 E-value=1.9e-05 Score=76.79 Aligned_cols=54 Identities=24% Similarity=0.433 Sum_probs=41.8
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEc--------------CCCcEEEEEeCCCcEE--ecCeEEEecCCC
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVD--------------SNGKVVAVNLRDGNRL--PTDMVVVGIGIR 138 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~--------------~~g~v~~v~~~~g~~i--~~D~vi~a~G~~ 138 (356)
...+.+.++++|++++++++|++++.+ +++.+..+.+.+| ++ .+|.||+|+|..
T Consensus 184 ~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~ 253 (448)
T 3axb_A 184 VDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVW 253 (448)
T ss_dssp HHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcC
Confidence 344556677889999999999999762 2445556777777 68 999999999965
No 243
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.00 E-value=7e-06 Score=80.84 Aligned_cols=97 Identities=18% Similarity=0.301 Sum_probs=67.6
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCC-----------------------------------ccCC---
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA-----------------------------------RLFT--- 80 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~-----------------------------------~~~d--- 80 (356)
..+|+|||+|+.|+.+|..|+++|.+|+|+++.. +.. ..++
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~-~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 98 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAELGARAAVVESHK-LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWRV 98 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCHHH
Confidence 3589999999999999999999999999999764 100 0011
Q ss_pred ---------HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCCch
Q 018416 81 ---------PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 81 ---------~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 142 (356)
..+...+...+++.||+++.+.. ..+ +... ..+. .+++++.+|.+|+|+|.+|...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~-~~~---~~~~-~~v~-~~g~~~~~d~lviAtG~~p~~p 163 (478)
T 3dk9_A 99 IKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHA-AFT---SDPK-PTIE-VSGKKYTAPHILIATGGMPSTP 163 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESCE-EEC---SCSS-CEEE-ETTEEEECSCEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEE-EEe---eCCe-EEEE-ECCEEEEeeEEEEccCCCCCCC
Confidence 11223345567788999998753 222 1221 1233 4678899999999999887653
No 244
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.99 E-value=3.1e-06 Score=87.98 Aligned_cols=88 Identities=18% Similarity=0.184 Sum_probs=60.3
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCcc--------CC--HHHHHHHHHHHHhC------CCEEEeCC
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARL--------FT--PKIASYYEEYYKSK------GVKFVKGT 102 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~--------~d--~~~~~~~~~~l~~~------GV~v~~~~ 102 (356)
.++|+|||||+.|+++|..|+++|++|||+++.+.+.... +. ..+.+.+.+.++.. +|++..++
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~~~~~~~v~i~~~~ 468 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLLKKNKESQLALGQK 468 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHHHHSTTCEEECSCC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhhcccCCceEEEeCe
Confidence 5789999999999999999999999999999987653210 10 22333333333332 55554332
Q ss_pred eeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCC
Q 018416 103 VLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPN 140 (356)
Q Consensus 103 ~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~ 140 (356)
. +.+.++.++.+|.||+|+|.+|.
T Consensus 469 ~--------------v~~~~~~~~~~d~vviAtG~~~~ 492 (729)
T 1o94_A 469 P--------------MTADDVLQYGADKVIIATGARWN 492 (729)
T ss_dssp C--------------CCHHHHHTSCCSEEEECCCEEEC
T ss_pred E--------------EehhhccccCCCEEEEcCCCCcc
Confidence 1 22334556889999999998854
No 245
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.99 E-value=3.4e-06 Score=80.52 Aligned_cols=88 Identities=17% Similarity=0.164 Sum_probs=68.8
Q ss_pred CcEEEECCchHHHHHHHHHHHC--CCcEEEEeeCCccC-----------------------Cc-----------------
Q 018416 40 GNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCM-----------------------AR----------------- 77 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~--G~~Vtlv~~~~~~l-----------------------~~----------------- 77 (356)
++|+|||||+.|+.+|..|++. |.+|+|+|+.+.+- ..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHH 80 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeC
Confidence 3699999999999999999999 99999999876540 00
Q ss_pred --------------cCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCC
Q 018416 78 --------------LFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPN 140 (356)
Q Consensus 78 --------------~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~ 140 (356)
....++.+.+.+.+++.|++++++++|++++. . +++.+|.||.|.|..+.
T Consensus 81 g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~-----------~~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 81 NEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGE--L-----------PLADYDLVVLANGVNHK 144 (381)
T ss_dssp SSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGG--C-----------CGGGCSEEEECCGGGGG
T ss_pred CeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchh--c-----------ccccCCEEEECCCCCch
Confidence 00145667778888888999999999887742 0 13689999999997653
No 246
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.96 E-value=2.6e-05 Score=77.69 Aligned_cols=98 Identities=14% Similarity=0.126 Sum_probs=66.7
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC--------ccCC-----------------------------------
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEA--------HCMA----------------------------------- 76 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~--------~~l~----------------------------------- 76 (356)
-+|+|||+|+.|+.+|..|++.|.+|+|+++.+ .+..
T Consensus 33 ~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~~~ 112 (519)
T 3qfa_A 33 YDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEE 112 (519)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 479999999999999999999999999999843 1100
Q ss_pred -ccCCHH------------HHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCc--EEecCeEEEecCCCCCc
Q 018416 77 -RLFTPK------------IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGN--RLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 77 -~~~d~~------------~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~--~i~~D~vi~a~G~~p~~ 141 (356)
..++.. +...+...+++.||+++.+. ...+. ... ..+...+|+ ++.+|.+|+|+|.+|..
T Consensus 113 ~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~-a~~~d---~~~-v~v~~~~g~~~~i~~d~lViATGs~p~~ 187 (519)
T 3qfa_A 113 TVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAY-GQFIG---PHR-IKATNNKGKEKIYSAERFLIATGERPRY 187 (519)
T ss_dssp SCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSE-EEEEE---TTE-EEEECTTCCCCEEEEEEEEECCCEEECC
T ss_pred cCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEee---CCE-EEEEcCCCCEEEEECCEEEEECCCCcCC
Confidence 001111 11122345677899998764 33332 222 345666664 79999999999988765
Q ss_pred h
Q 018416 142 S 142 (356)
Q Consensus 142 ~ 142 (356)
.
T Consensus 188 p 188 (519)
T 3qfa_A 188 L 188 (519)
T ss_dssp C
T ss_pred C
Confidence 3
No 247
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.95 E-value=2.6e-05 Score=78.27 Aligned_cols=97 Identities=20% Similarity=0.300 Sum_probs=69.9
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc------------------------------------------
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR------------------------------------------ 77 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~------------------------------------------ 77 (356)
.+|+|||+|++|+-+|..|++.|.+|+|+|+.+.+...
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 106 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTRV 106 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESSB
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEeccC
Confidence 37999999999999999999999999999987532100
Q ss_pred ---c---C---------------------C-HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCC---C--c
Q 018416 78 ---L---F---------------------T-PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD---G--N 124 (356)
Q Consensus 78 ---~---~---------------------d-~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~---g--~ 124 (356)
. + + ..+.+.+.+.+++. +++++++++++.++++ + .+++.+ | +
T Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~-v-~v~~~~~~~G~~~ 181 (549)
T 2r0c_A 107 GGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDH-V-RATITDLRTGATR 181 (549)
T ss_dssp TSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSC-E-EEEEEETTTCCEE
T ss_pred CCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCE-E-EEEEEECCCCCEE
Confidence 0 0 0 12334455555554 8889999999875444 3 344443 6 4
Q ss_pred EEecCeEEEecCCCCCc
Q 018416 125 RLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 125 ~i~~D~vi~a~G~~p~~ 141 (356)
++.+|+||.|.|.+...
T Consensus 182 ~i~a~~vVgADG~~S~v 198 (549)
T 2r0c_A 182 AVHARYLVACDGASSPT 198 (549)
T ss_dssp EEEEEEEEECCCTTCHH
T ss_pred EEEeCEEEECCCCCcHH
Confidence 79999999999987643
No 248
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.95 E-value=3e-05 Score=79.27 Aligned_cols=102 Identities=22% Similarity=0.267 Sum_probs=75.8
Q ss_pred CcEEEECCchHHHHHHHHHHH-CCCcEEEEeeCCccCCc-----------------------------------------
Q 018416 40 GNAVVIGGGYIGMECAASLVI-NKINVTMVFPEAHCMAR----------------------------------------- 77 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~-~G~~Vtlv~~~~~~l~~----------------------------------------- 77 (356)
.+|+|||||++|+-+|..|++ .|.+|+|+|+.+.+...
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 112 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDPG 112 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECTT
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCCC
Confidence 369999999999999999999 99999999986432100
Q ss_pred ------------------------cCC-HHHHHHHHHHHHhCCC--EEEeCCeeeEEEEcCC--CcEEEEEeC------C
Q 018416 78 ------------------------LFT-PKIASYYEEYYKSKGV--KFVKGTVLSSFDVDSN--GKVVAVNLR------D 122 (356)
Q Consensus 78 ------------------------~~d-~~~~~~~~~~l~~~GV--~v~~~~~v~~i~~~~~--g~v~~v~~~------~ 122 (356)
.++ ..+.+.+.+.+++.|+ +++.++++++++.+++ +....+++. +
T Consensus 113 ~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~ 192 (639)
T 2dkh_A 113 QPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHA 192 (639)
T ss_dssp STTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGT
T ss_pred CCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCC
Confidence 001 2455667778888877 9999999999987542 212345443 4
Q ss_pred C--cEEecCeEEEecCCCCCc
Q 018416 123 G--NRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 123 g--~~i~~D~vi~a~G~~p~~ 141 (356)
| +++.+|+||.|.|.+...
T Consensus 193 G~~~~i~a~~vVgADG~~S~v 213 (639)
T 2dkh_A 193 GQIETVQARYVVGCDGARSNV 213 (639)
T ss_dssp TCEEEEEEEEEEECCCTTCHH
T ss_pred CCeEEEEeCEEEECCCcchHH
Confidence 6 579999999999987643
No 249
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.90 E-value=7.1e-05 Score=75.98 Aligned_cols=97 Identities=12% Similarity=0.182 Sum_probs=71.7
Q ss_pred CcEEEECCchHHHHHHHHHHHCC--CcEEEEeeCCccCC--------------c-----------------cCC------
Q 018416 40 GNAVVIGGGYIGMECAASLVINK--INVTMVFPEAHCMA--------------R-----------------LFT------ 80 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G--~~Vtlv~~~~~~l~--------------~-----------------~~d------ 80 (356)
-.|+|||+|..|+-+|..|++.| .+|+|+++.+.... . ..+
T Consensus 6 ~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~~ 85 (602)
T 1kf6_A 6 ADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDY 85 (602)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Confidence 37999999999999999999999 99999998643200 0 000
Q ss_pred ------------------------------------------------HHHHHHHHHHHHhCC-CEEEeCCeeeEEEEcC
Q 018416 81 ------------------------------------------------PKIASYYEEYYKSKG-VKFVKGTVLSSFDVDS 111 (356)
Q Consensus 81 ------------------------------------------------~~~~~~~~~~l~~~G-V~v~~~~~v~~i~~~~ 111 (356)
..+...+.+.+++.| |+++.++.++++.. +
T Consensus 86 ~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~-~ 164 (602)
T 1kf6_A 86 FVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILV-D 164 (602)
T ss_dssp HHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEE-E
T ss_pred HHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEE-e
Confidence 123344445556678 99999999999986 3
Q ss_pred CCcEEEEE---eCCCc--EEecCeEEEecCC
Q 018416 112 NGKVVAVN---LRDGN--RLPTDMVVVGIGI 137 (356)
Q Consensus 112 ~g~v~~v~---~~~g~--~i~~D~vi~a~G~ 137 (356)
++.+..+. +.+|+ .+.++.||+|+|.
T Consensus 165 ~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 195 (602)
T 1kf6_A 165 DGHVRGLVAMNMMEGTLVQIRANAVVMATGG 195 (602)
T ss_dssp TTEEEEEEEEETTTTEEEEEECSCEEECCCC
T ss_pred CCEEEEEEEEEcCCCcEEEEEcCeEEECCCC
Confidence 56555443 25676 6899999999995
No 250
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.89 E-value=7.6e-05 Score=73.65 Aligned_cols=98 Identities=19% Similarity=0.156 Sum_probs=65.8
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC--------ccC------------------------------------
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEA--------HCM------------------------------------ 75 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~--------~~l------------------------------------ 75 (356)
-.++|||+|+.|+.+|..|++.|.+|+|+++.+ .+.
T Consensus 7 ~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~~~ 86 (488)
T 3dgz_A 7 FDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEVAQ 86 (488)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 379999999999999999999999999999621 110
Q ss_pred CccCCH-H-----------HHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCC--cEEecCeEEEecCCCCCc
Q 018416 76 ARLFTP-K-----------IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG--NRLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 76 ~~~~d~-~-----------~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g--~~i~~D~vi~a~G~~p~~ 141 (356)
+..++. . +...+...+++.+|+++.+. +..+ +... ..+...+| .++.+|.+|+|+|.+|..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~-~~~~---~~~~-v~v~~~~g~~~~~~~d~lViATGs~p~~ 161 (488)
T 3dgz_A 87 PVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIK-ASFV---DEHT-VRGVDKGGKATLLSAEHIVIATGGRPRY 161 (488)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCE-EEES---SSSE-EEEECTTSCEEEEEEEEEEECCCEEECC
T ss_pred cCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEc---cCCe-EEEEeCCCceEEEECCEEEEcCCCCCCC
Confidence 001221 1 11123345677899998654 2222 2222 35666666 479999999999988764
Q ss_pred h
Q 018416 142 S 142 (356)
Q Consensus 142 ~ 142 (356)
.
T Consensus 162 p 162 (488)
T 3dgz_A 162 P 162 (488)
T ss_dssp C
T ss_pred C
Confidence 3
No 251
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.87 E-value=7.8e-05 Score=73.41 Aligned_cols=98 Identities=23% Similarity=0.328 Sum_probs=65.6
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc----------------------------------------c-CC--
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH----------------------------------------C-MA-- 76 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~----------------------------------------~-l~-- 76 (356)
-+++|||+|+.|+.+|..|++.|.+|+|+++.+. + +.
T Consensus 10 ~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~~ 89 (483)
T 3dgh_A 10 YDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWNVD 89 (483)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCCC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCcccC
Confidence 4799999999999999999999999999983110 0 00
Q ss_pred --ccCCH-HH-----------HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCc-EEecCeEEEecCCCCCc
Q 018416 77 --RLFTP-KI-----------ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGN-RLPTDMVVVGIGIRPNT 141 (356)
Q Consensus 77 --~~~d~-~~-----------~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~-~i~~D~vi~a~G~~p~~ 141 (356)
..++. .+ ...+...+++.+|+++.+.. .-+. ... ..+.+.+|+ ++.+|.+|+|+|.+|..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a-~~~~---~~~-v~v~~~~g~~~~~~d~lviATGs~p~~ 164 (483)
T 3dgh_A 90 DKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLG-SFVD---SHT-LLAKLKSGERTITAQTFVIAVGGRPRY 164 (483)
T ss_dssp CCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEE-EEEE---TTE-EEEECTTCCEEEEEEEEEECCCEEECC
T ss_pred CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEE-EEcc---CCE-EEEEeCCCeEEEEcCEEEEeCCCCcCC
Confidence 01121 11 11223446778999987643 2221 222 356666774 79999999999988765
Q ss_pred h
Q 018416 142 S 142 (356)
Q Consensus 142 ~ 142 (356)
.
T Consensus 165 p 165 (483)
T 3dgh_A 165 P 165 (483)
T ss_dssp C
T ss_pred C
Confidence 3
No 252
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.87 E-value=0.00014 Score=73.58 Aligned_cols=97 Identities=15% Similarity=0.149 Sum_probs=71.7
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC--------------Cc-------------------cCCH------
Q 018416 41 NAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM--------------AR-------------------LFTP------ 81 (356)
Q Consensus 41 ~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l--------------~~-------------------~~d~------ 81 (356)
.|+|||+|..|+-+|..|++.|.+|+|+++.+... .. ..++
T Consensus 9 DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~~~ 88 (588)
T 2wdq_A 9 DAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYM 88 (588)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 69999999999999999999999999999864320 00 0011
Q ss_pred -------------------------------------------------------HHHHHHHHHHHhCCCEEEeCCeeeE
Q 018416 82 -------------------------------------------------------KIASYYEEYYKSKGVKFVKGTVLSS 106 (356)
Q Consensus 82 -------------------------------------------------------~~~~~~~~~l~~~GV~v~~~~~v~~ 106 (356)
.+...+.+.+++.||++++++.+++
T Consensus 89 ~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v~~ 168 (588)
T 2wdq_A 89 CKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALD 168 (588)
T ss_dssp HHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTTCEEEETEEEEE
T ss_pred HHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhCCCEEEeCcEEEE
Confidence 1222344555667999999999999
Q ss_pred EEEcCCCcEEEEEe---CCCc--EEecCeEEEecCC
Q 018416 107 FDVDSNGKVVAVNL---RDGN--RLPTDMVVVGIGI 137 (356)
Q Consensus 107 i~~~~~g~v~~v~~---~~g~--~i~~D~vi~a~G~ 137 (356)
+..++++++..+.. .+|+ .+.++.||+|+|.
T Consensus 169 L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg 204 (588)
T 2wdq_A 169 LVKNQDGAVVGCTALCIETGEVVYFKARATVLATGG 204 (588)
T ss_dssp EEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred EEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCC
Confidence 98743666666654 4565 5899999999995
No 253
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.83 E-value=8.2e-05 Score=77.65 Aligned_cols=63 Identities=19% Similarity=0.270 Sum_probs=48.1
Q ss_pred CCCCCCeEEeCCHHHHHHHHHHHhcC---------------------CCCcEEEECCchHHHHHHHHHHHCCCcEEEEee
Q 018416 12 GSDAENVCYLRDLADANRLVNVMKSC---------------------SGGNAVVIGGGYIGMECAASLVINKINVTMVFP 70 (356)
Q Consensus 12 G~~~~~v~~l~~~~da~~i~~~l~~~---------------------~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~ 70 (356)
+.+.++++++++..+...++..+... ...+|+|||+|..|+.+|..|++.|.+|+|+|+
T Consensus 288 ~~~~r~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~ 367 (776)
T 4gut_A 288 HIIVRGLVRIRCVQEVERILYFMTRKGLINTGVLSVGADQYLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEA 367 (776)
T ss_dssp GCCCSSTHHHHHHHHHHHHHHHHHHHTSSSCTTCCCCGGGCSSCGGGTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECS
T ss_pred hcccccccccccHHHHHHHHHHHHHhhhhhcccccccccccCCCCCCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEec
Confidence 44556666666667777766655321 135899999999999999999999999999998
Q ss_pred CCcc
Q 018416 71 EAHC 74 (356)
Q Consensus 71 ~~~~ 74 (356)
.+++
T Consensus 368 ~~~~ 371 (776)
T 4gut_A 368 KDRI 371 (776)
T ss_dssp SSSS
T ss_pred ccce
Confidence 6544
No 254
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.75 E-value=0.00015 Score=73.16 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=31.4
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
...|+|||||.+|+-+|..|+++|.+|+|+|+.+
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4589999999999999999999999999999753
No 255
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.73 E-value=0.0001 Score=74.55 Aligned_cols=99 Identities=12% Similarity=0.187 Sum_probs=65.0
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeC-Cc-------cC----------------------------------C
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPE-AH-------CM----------------------------------A 76 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~-~~-------~l----------------------------------~ 76 (356)
..+++|||+|+.|+.+|..|+++|.+|+++++. +. +. +
T Consensus 107 ~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~~~ 186 (598)
T 2x8g_A 107 DYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWSLD 186 (598)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred cccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCcccc
Confidence 457999999999999999999999999999963 21 00 0
Q ss_pred c---cCC-HHHHHHH-----------HHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCC--cEEecCeEEEecCCCC
Q 018416 77 R---LFT-PKIASYY-----------EEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG--NRLPTDMVVVGIGIRP 139 (356)
Q Consensus 77 ~---~~d-~~~~~~~-----------~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g--~~i~~D~vi~a~G~~p 139 (356)
. ..+ +++.+.+ ...+++.||+++.+. ...+. ... ..+...+| +++.+|.||+|+|.+|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~-~~~~~---~~~-v~v~~~~g~~~~~~~d~lviAtGs~p 261 (598)
T 2x8g_A 187 RSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAK-GRLIS---PHE-VQITDKNQKVSTITGNKIILATGERP 261 (598)
T ss_dssp GGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSE-EEEEE---TTE-EEEECTTCCEEEEEEEEEEECCCEEE
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEE-EEEcC---CCE-EEEEeCCCCeEEEEeCEEEEeCCCCC
Confidence 0 001 1121221 223567899988653 33332 122 34455666 4699999999999887
Q ss_pred Cch
Q 018416 140 NTS 142 (356)
Q Consensus 140 ~~~ 142 (356)
...
T Consensus 262 ~~p 264 (598)
T 2x8g_A 262 KYP 264 (598)
T ss_dssp CCC
T ss_pred CCC
Confidence 653
No 256
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.69 E-value=5.1e-05 Score=75.07 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=31.0
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
-+++|||||+.|+.+|..|++.|.+|+|+++.+
T Consensus 9 ~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 9 VDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 379999999999999999999999999999875
No 257
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.68 E-value=0.00029 Score=70.56 Aligned_cols=33 Identities=21% Similarity=0.300 Sum_probs=30.6
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
-.|+|||+|..|+-+|..|++ |.+|+|+++.+.
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~ 41 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPV 41 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCT
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCCC
Confidence 479999999999999999999 999999999764
No 258
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.66 E-value=0.00022 Score=69.24 Aligned_cols=40 Identities=25% Similarity=0.341 Sum_probs=33.5
Q ss_pred CEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCC
Q 018416 96 VKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGI 137 (356)
Q Consensus 96 V~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~ 137 (356)
++++++++|++|+.++++ ..|++.+|+++.+|.||++++.
T Consensus 248 ~~i~~~~~V~~i~~~~~~--~~v~~~~g~~~~ad~vi~a~p~ 287 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSC--YSLELDNGVTLDADSVIVTAPH 287 (470)
T ss_dssp EEEECSCCEEEEEECSSS--EEEEESSSCEEEESEEEECSCH
T ss_pred CEEEeCCceEEEEEcCCe--EEEEECCCCEEECCEEEECCCH
Confidence 589999999999875444 4588889989999999999874
No 259
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.58 E-value=5.6e-05 Score=66.17 Aligned_cols=34 Identities=21% Similarity=0.286 Sum_probs=32.2
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEeeCCcc
Q 018416 41 NAVVIGGGYIGMECAASLVINKINVTMVFPEAHC 74 (356)
Q Consensus 41 ~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~ 74 (356)
.|+|||+|+.|+.+|..|++.|++|+|+|+++.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 5999999999999999999999999999998765
No 260
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.58 E-value=0.0004 Score=70.67 Aligned_cols=32 Identities=31% Similarity=0.346 Sum_probs=30.3
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 41 NAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 41 ~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
.|+|||+|..|+-+|..|++.|.+|+|+++.+
T Consensus 20 DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~ 51 (621)
T 2h88_A 20 DAVVVGAGGAGLRAAFGLSEAGFNTACVTKLF 51 (621)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CEEEECccHHHHHHHHHHHHCCCcEEEEeccC
Confidence 69999999999999999999999999999864
No 261
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.56 E-value=0.00036 Score=71.60 Aligned_cols=33 Identities=18% Similarity=0.360 Sum_probs=30.6
Q ss_pred CcEEEECCchHHHHHHHHHHH-----CCCcEEEEeeCC
Q 018416 40 GNAVVIGGGYIGMECAASLVI-----NKINVTMVFPEA 72 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~-----~G~~Vtlv~~~~ 72 (356)
-.|+|||||+.|+-+|..|++ .|.+|+|+|+.+
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~ 46 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRS 46 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCC
Confidence 369999999999999999999 999999999864
No 262
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.48 E-value=0.00027 Score=71.99 Aligned_cols=52 Identities=13% Similarity=0.264 Sum_probs=41.3
Q ss_pred CCEEEeCCeeeEEEEcCC-CcEEEEEeC---CCc--EEecCeEEEecCCCCCchhhhc
Q 018416 95 GVKFVKGTVLSSFDVDSN-GKVVAVNLR---DGN--RLPTDMVVVGIGIRPNTSLFEG 146 (356)
Q Consensus 95 GV~v~~~~~v~~i~~~~~-g~v~~v~~~---~g~--~i~~D~vi~a~G~~p~~~l~~~ 146 (356)
||++++++.|+++..+++ +++..|++. +|+ ++++|.||+|+|..|++.++..
T Consensus 274 nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~ 331 (623)
T 3pl8_A 274 RFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVN 331 (623)
T ss_dssp EEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHT
T ss_pred CEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHh
Confidence 789999999999987433 366677664 354 6889999999999999987754
No 263
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.47 E-value=0.00076 Score=69.10 Aligned_cols=33 Identities=21% Similarity=0.379 Sum_probs=30.7
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
-.|+|||+|.+|+-+|..|++.|.+|+|+++.+
T Consensus 6 ~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~ 38 (660)
T 2bs2_A 6 CDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIP 38 (660)
T ss_dssp CSEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred ccEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 379999999999999999999999999999864
No 264
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.29 E-value=0.0013 Score=67.15 Aligned_cols=33 Identities=30% Similarity=0.484 Sum_probs=30.3
Q ss_pred CcEEEECCchHHHHHHHHHH---H-CCCcEEEEeeCC
Q 018416 40 GNAVVIGGGYIGMECAASLV---I-NKINVTMVFPEA 72 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~---~-~G~~Vtlv~~~~ 72 (356)
-.|+|||+|..|+-+|..++ + .|.+|+|+++.+
T Consensus 23 ~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~ 59 (643)
T 1jnr_A 23 TDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAA 59 (643)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcC
Confidence 37999999999999999999 6 899999999875
No 265
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.10 E-value=0.0016 Score=65.19 Aligned_cols=97 Identities=22% Similarity=0.310 Sum_probs=64.1
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc--------cC---------------------------Cc--------
Q 018416 41 NAVVIGGGYIGMECAASLVINKINVTMVFPEAH--------CM---------------------------AR-------- 77 (356)
Q Consensus 41 ~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~--------~l---------------------------~~-------- 77 (356)
.++|||+|+.|+.+|..++++|.+|.|||+.+. +. ..
T Consensus 44 DviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~~~ 123 (542)
T 4b1b_A 44 DYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKFDN 123 (542)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCcccCc
Confidence 499999999999999999999999999996431 10 00
Q ss_pred -cCC-HH-----------HHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeC----CCcEEecCeEEEecCCCCC
Q 018416 78 -LFT-PK-----------IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR----DGNRLPTDMVVVGIGIRPN 140 (356)
Q Consensus 78 -~~d-~~-----------~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~----~g~~i~~D~vi~a~G~~p~ 140 (356)
.+| +. +...+...|++.||+++.+.. ++.. ...+ .+... +++++.+|.+|+|||.+|.
T Consensus 124 ~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a--~f~~--~~~v-~V~~~~~~~~~~~i~a~~iiIATGs~P~ 198 (542)
T 4b1b_A 124 LKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLA--KLKD--KNTV-SYYLKGDLSKEETVTGKYILIATGCRPH 198 (542)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEE--EEEE--TTEE-EEEEC--CCCEEEEEEEEEEECCCEEEC
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeE--EEcC--CCcc-eEeecccCCceEEEeeeeEEeccCCCCC
Confidence 011 11 112234457788999986642 3432 2322 23322 3367999999999999886
Q ss_pred ch
Q 018416 141 TS 142 (356)
Q Consensus 141 ~~ 142 (356)
..
T Consensus 199 ~P 200 (542)
T 4b1b_A 199 IP 200 (542)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 266
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.03 E-value=0.00062 Score=66.91 Aligned_cols=74 Identities=16% Similarity=0.254 Sum_probs=53.4
Q ss_pred HHHHHHHHHh-----cCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccC---------CHH--------H
Q 018416 26 DANRLVNVMK-----SCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLF---------TPK--------I 83 (356)
Q Consensus 26 da~~i~~~l~-----~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~---------d~~--------~ 83 (356)
|+.++.+.+. ...+++|+|||+|++|+.+|..|++.|.+|+|+|+.+++..+.. ..+ .
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~ 94 (498)
T 2iid_A 15 DYEEFLEIARNGLKATSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEK 94 (498)
T ss_dssp THHHHHHHHHHCSCCCSSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETT
T ss_pred hHHHHHHHhccCCCCCCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccch
Confidence 4555555542 12367899999999999999999999999999999887655310 001 1
Q ss_pred HHHHHHHHHhCCCEEE
Q 018416 84 ASYYEEYYKSKGVKFV 99 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~ 99 (356)
...+.+.+++.|+++.
T Consensus 95 ~~~~~~~~~~~g~~~~ 110 (498)
T 2iid_A 95 HRIVREYIRKFDLRLN 110 (498)
T ss_dssp CHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHhCCCce
Confidence 3456777888888754
No 267
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.01 E-value=0.0033 Score=62.16 Aligned_cols=102 Identities=13% Similarity=0.103 Sum_probs=70.1
Q ss_pred cEEEECCchHHHHHHHHHHHCC--------------CcEEEEeeCCccC-------Cc----------------------
Q 018416 41 NAVVIGGGYIGMECAASLVINK--------------INVTMVFPEAHCM-------AR---------------------- 77 (356)
Q Consensus 41 ~vvVvGgG~iGlE~A~~L~~~G--------------~~Vtlv~~~~~~l-------~~---------------------- 77 (356)
.|+|||+|+.|+-+|..|.+.| ..+.++++.+.+- +.
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~~s 120 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSFT 120 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCTTS
T ss_pred cEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCccc
Confidence 4899999999999999998643 3567788765321 00
Q ss_pred -------------------cC--CHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCC------cEEEEEeCCC-----cE
Q 018416 78 -------------------LF--TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNG------KVVAVNLRDG-----NR 125 (356)
Q Consensus 78 -------------------~~--d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g------~v~~v~~~~g-----~~ 125 (356)
.+ -.++.++++...++.+..++++++|++++..+++ ..-.|+..++ ++
T Consensus 121 f~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~ 200 (501)
T 4b63_A 121 FLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISA 200 (501)
T ss_dssp HHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEE
T ss_pred hHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEE
Confidence 00 1356666666666777789999999999764332 1234444333 35
Q ss_pred EecCeEEEecCCCCCch
Q 018416 126 LPTDMVVVGIGIRPNTS 142 (356)
Q Consensus 126 i~~D~vi~a~G~~p~~~ 142 (356)
+.++.||+|+|..|+..
T Consensus 201 ~~ar~vVlatG~~P~iP 217 (501)
T 4b63_A 201 RRTRKVVIAIGGTAKMP 217 (501)
T ss_dssp EEEEEEEECCCCEECCC
T ss_pred EEeCEEEECcCCCCCCC
Confidence 88999999999887754
No 268
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.96 E-value=0.0011 Score=64.76 Aligned_cols=82 Identities=21% Similarity=0.163 Sum_probs=61.5
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEE
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVA 117 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~ 117 (356)
.+|++.|||.|.+|+.+|..|.++|++|++.+..+.- .++ ..+.|++.||+++.+.....+
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~----~~~-----~~~~L~~~gi~~~~g~~~~~~---------- 68 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFD----ENP-----TAQSLLEEGIKVVCGSHPLEL---------- 68 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGG----GCH-----HHHHHHHTTCEEEESCCCGGG----------
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCccc----CCh-----HHHHHHhCCCEEEECCChHHh----------
Confidence 5799999999999999999999999999999987631 122 235678889999876541100
Q ss_pred EEeCCCcEEecCeEEEecCCCCCchhh
Q 018416 118 VNLRDGNRLPTDMVVVGIGIRPNTSLF 144 (356)
Q Consensus 118 v~~~~g~~i~~D~vi~a~G~~p~~~l~ 144 (356)
+ ++ .+|.||+++|..|+...+
T Consensus 69 --~-~~---~~d~vv~spgi~~~~p~~ 89 (451)
T 3lk7_A 69 --L-DE---DFCYMIKNPGIPYNNPMV 89 (451)
T ss_dssp --G-GS---CEEEEEECTTSCTTSHHH
T ss_pred --h-cC---CCCEEEECCcCCCCChhH
Confidence 0 10 179999999998877654
No 269
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.93 E-value=0.0013 Score=61.30 Aligned_cols=81 Identities=19% Similarity=0.175 Sum_probs=60.8
Q ss_pred CCCcEEEECCchHHHH-HHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEE
Q 018416 38 SGGNAVVIGGGYIGME-CAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVV 116 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE-~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~ 116 (356)
..+++.|||.|-+|+. +|..|.++|.+|++.+..+. + + ..+.|++.||+++.+.....
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~--~----~-----~~~~L~~~gi~v~~g~~~~~---------- 61 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY--P----P-----MSTQLEALGIDVYEGFDAAQ---------- 61 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC--T----T-----HHHHHHHTTCEEEESCCGGG----------
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC--c----H-----HHHHHHhCCCEEECCCCHHH----------
Confidence 4689999999999997 89999999999999998753 1 1 24567888999886532110
Q ss_pred EEEeCCCcEEecCeEEEecCCCCCchhhh
Q 018416 117 AVNLRDGNRLPTDMVVVGIGIRPNTSLFE 145 (356)
Q Consensus 117 ~v~~~~g~~i~~D~vi~a~G~~p~~~l~~ 145 (356)
+.. ..+|.||+++|..|....+.
T Consensus 62 ---l~~---~~~d~vV~Spgi~~~~p~~~ 84 (326)
T 3eag_A 62 ---LDE---FKADVYVIGNVAKRGMDVVE 84 (326)
T ss_dssp ---GGS---CCCSEEEECTTCCTTCHHHH
T ss_pred ---cCC---CCCCEEEECCCcCCCCHHHH
Confidence 010 14899999999998877554
No 270
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.92 E-value=0.0022 Score=65.73 Aligned_cols=32 Identities=19% Similarity=0.201 Sum_probs=29.8
Q ss_pred CcEEEECCchHHHHHHHHHHHC------CCcEEEEeeC
Q 018416 40 GNAVVIGGGYIGMECAASLVIN------KINVTMVFPE 71 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~------G~~Vtlv~~~ 71 (356)
-.|+|||+|..|+-+|..|++. |.+|+|+++.
T Consensus 23 ~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~ 60 (662)
T 3gyx_A 23 VDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKA 60 (662)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred cCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEec
Confidence 3699999999999999999998 9999999985
No 271
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.83 E-value=0.0044 Score=54.56 Aligned_cols=107 Identities=15% Similarity=0.260 Sum_probs=69.0
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEE
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVA 117 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~ 117 (356)
.+++++|||||.+|...+..|.+.|.+||++.+. +.+++ .+..++.+|+++... +
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~-------~~~~l----~~l~~~~~i~~i~~~----~---------- 84 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT-------VSAEI----NEWEAKGQLRVKRKK----V---------- 84 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS-------CCHHH----HHHHHTTSCEEECSC----C----------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC-------CCHHH----HHHHHcCCcEEEECC----C----------
Confidence 6899999999999999999999999999999763 35554 333345567665321 1
Q ss_pred EEeCCCcEEecCeEEEecCCCCCchhhhcccccccCcEEEec-----ccccCCCCEEEEcccc
Q 018416 118 VNLRDGNRLPTDMVVVGIGIRPNTSLFEGQLTLEKGGIKVTG-----RLQSSNSSVYAVGDVA 175 (356)
Q Consensus 118 v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~l~~~~g~I~vd~-----~l~ts~~~VyAiGD~~ 175 (356)
..+..-.+|+||.|||........... .. .+|.||- .+.-..|.++--||..
T Consensus 85 ---~~~dL~~adLVIaAT~d~~~N~~I~~~--ak-~gi~VNvvD~p~~~~f~~Paiv~rg~l~ 141 (223)
T 3dfz_A 85 ---GEEDLLNVFFIVVATNDQAVNKFVKQH--IK-NDQLVNMASSFSDGNIQIPAQFSRGRLS 141 (223)
T ss_dssp ---CGGGSSSCSEEEECCCCTHHHHHHHHH--SC-TTCEEEC-----CCSEECCEEEEETTEE
T ss_pred ---CHhHhCCCCEEEECCCCHHHHHHHHHH--Hh-CCCEEEEeCCcccCeEEEeeEEEeCCEE
Confidence 111112489999999865433322211 12 5676662 2222567777777764
No 272
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=96.56 E-value=0.0017 Score=62.78 Aligned_cols=33 Identities=18% Similarity=0.281 Sum_probs=31.6
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
++|+|||||+.|+.+|..|++.|.+|+|+++.+
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 689999999999999999999999999999876
No 273
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=96.48 E-value=0.0029 Score=60.65 Aligned_cols=37 Identities=19% Similarity=0.274 Sum_probs=34.2
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCC-CcEEEEeeCCcc
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINK-INVTMVFPEAHC 74 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G-~~Vtlv~~~~~~ 74 (356)
+..+|+|||||..|+-+|..|++.| .+|+|+|+.+++
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHV 42 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCC
Confidence 4578999999999999999999999 999999998776
No 274
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=96.40 E-value=0.0034 Score=60.08 Aligned_cols=33 Identities=24% Similarity=0.288 Sum_probs=31.2
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
++|+|||||..|+++|..+++.|.+|+++++.+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 479999999999999999999999999999876
No 275
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=96.36 E-value=0.0026 Score=61.90 Aligned_cols=35 Identities=26% Similarity=0.381 Sum_probs=32.8
Q ss_pred CcEEEECCchHHHHHHHHHHHCCC--cEEEEeeCCcc
Q 018416 40 GNAVVIGGGYIGMECAASLVINKI--NVTMVFPEAHC 74 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~--~Vtlv~~~~~~ 74 (356)
++|+|||||.+|+-+|..|++.|. +|+|+|+++++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 589999999999999999999999 99999998765
No 276
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=96.34 E-value=0.0024 Score=62.63 Aligned_cols=35 Identities=23% Similarity=0.233 Sum_probs=32.1
Q ss_pred cEEEECCchHHHHHHHHHHH-CCCcEEEEeeCCccC
Q 018416 41 NAVVIGGGYIGMECAASLVI-NKINVTMVFPEAHCM 75 (356)
Q Consensus 41 ~vvVvGgG~iGlE~A~~L~~-~G~~Vtlv~~~~~~l 75 (356)
.|+|||||+.|+-+|..|++ .|.+|+|+|+++++.
T Consensus 12 DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~G 47 (513)
T 4gde_A 12 DVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPG 47 (513)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCC
T ss_pred CEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCc
Confidence 59999999999999999987 599999999998764
No 277
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=96.31 E-value=0.0039 Score=59.36 Aligned_cols=37 Identities=16% Similarity=0.285 Sum_probs=33.8
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeC-Ccc
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPE-AHC 74 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~-~~~ 74 (356)
.+.+|+|||+|+.|+-+|..|.+.|++|+|+|+. +++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 3578999999999999999999999999999998 654
No 278
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=96.27 E-value=0.0039 Score=61.67 Aligned_cols=36 Identities=31% Similarity=0.429 Sum_probs=33.6
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCcc
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHC 74 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~ 74 (356)
..+|+|||||..|+-+|..|++.|.+|+|+|+++++
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 39 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRV 39 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 468999999999999999999999999999998776
No 279
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=96.25 E-value=0.0043 Score=60.72 Aligned_cols=39 Identities=26% Similarity=0.284 Sum_probs=34.9
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCC
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA 76 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~ 76 (356)
...+|+|||+|..|+-+|..|++.|.+|+|+|+.+++..
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG 48 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGG 48 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCC
Confidence 356899999999999999999999999999999877543
No 280
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=96.21 E-value=0.004 Score=61.57 Aligned_cols=37 Identities=19% Similarity=0.326 Sum_probs=33.8
Q ss_pred CCcEEEECCchHHHHHHHHHHHCC-CcEEEEeeCCccC
Q 018416 39 GGNAVVIGGGYIGMECAASLVINK-INVTMVFPEAHCM 75 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G-~~Vtlv~~~~~~l 75 (356)
..+|+|||||..|+-+|..|++.| .+|+|+|+++++.
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riG 45 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVG 45 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSB
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCC
Confidence 368999999999999999999999 9999999987654
No 281
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=96.19 E-value=0.0041 Score=58.28 Aligned_cols=34 Identities=26% Similarity=0.401 Sum_probs=31.4
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
..+|+|||+|.+|+-+|..|+++|.+|+|+++.+
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 3589999999999999999999999999999863
No 282
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=96.14 E-value=0.0047 Score=60.12 Aligned_cols=38 Identities=26% Similarity=0.384 Sum_probs=33.9
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM 75 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l 75 (356)
...+|+|||+|..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~G 52 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLG 52 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSB
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCC
Confidence 35789999999999999999999999999999998764
No 283
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=96.14 E-value=0.0046 Score=60.22 Aligned_cols=39 Identities=15% Similarity=0.182 Sum_probs=35.4
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR 77 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~ 77 (356)
..+|+|||+|..|+-+|..|++.|++|+++|+.+++..+
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~ 49 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGE 49 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCcc
Confidence 357999999999999999999999999999999887544
No 284
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=96.02 E-value=0.016 Score=53.63 Aligned_cols=84 Identities=25% Similarity=0.227 Sum_probs=54.5
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEEEe-CCeeeEEEEcCCCcEEEE
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVK-GTVLSSFDVDSNGKVVAV 118 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v~~-~~~v~~i~~~~~g~v~~v 118 (356)
.++.|||+|.+|.-+|..|++.|.+|+++.|.+. +.+++.|+.+.. ...-..+.+ ..+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~---------------~~i~~~Gl~~~~~~~g~~~~~~------~~~ 61 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDY---------------ETVKAKGIRIRSATLGDYTFRP------AAV 61 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTTH---------------HHHHHHCEEEEETTTCCEEECC------SCE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCChH---------------HHHHhCCcEEeecCCCcEEEee------eee
Confidence 5899999999999999999999999999987530 345566776643 100001100 001
Q ss_pred EeCCCcE-E-ecCeEEEecCCCCCchhhh
Q 018416 119 NLRDGNR-L-PTDMVVVGIGIRPNTSLFE 145 (356)
Q Consensus 119 ~~~~g~~-i-~~D~vi~a~G~~p~~~l~~ 145 (356)
+.+-+. . ++|+||+++-.....+.++
T Consensus 62 -~~~~~~~~~~~DlVilavK~~~~~~~l~ 89 (320)
T 3i83_A 62 -VRSAAELETKPDCTLLCIKVVEGADRVG 89 (320)
T ss_dssp -ESCGGGCSSCCSEEEECCCCCTTCCHHH
T ss_pred -ECCHHHcCCCCCEEEEecCCCChHHHHH
Confidence 122222 2 6899999998776555544
No 285
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=96.01 E-value=0.0059 Score=59.88 Aligned_cols=37 Identities=32% Similarity=0.425 Sum_probs=34.4
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM 75 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l 75 (356)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~G 49 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAG 49 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCC
Confidence 4789999999999999999999999999999998764
No 286
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=96.00 E-value=0.0061 Score=58.85 Aligned_cols=60 Identities=17% Similarity=0.304 Sum_probs=45.9
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCcc----------------CCHHHHHHHHHHHHhCCCEEEe
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARL----------------FTPKIASYYEEYYKSKGVKFVK 100 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~----------------~d~~~~~~~~~~l~~~GV~v~~ 100 (356)
.+|+|||+|..|+.+|..|++.|.+|+|+|+++++..+. +... ...+.+.+++.|++...
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~-~~~~~~~~~~~g~~~~~ 81 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPD-QTALISLLDELGLKTFE 81 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCTT-CHHHHHHHHHTTCCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCCceeccCCeEecCc-cHHHHHHHHHcCCcccc
Confidence 579999999999999999999999999999987653321 1111 24456677888987654
No 287
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.96 E-value=0.0085 Score=49.19 Aligned_cols=37 Identities=19% Similarity=0.139 Sum_probs=33.7
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCcc
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHC 74 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~ 74 (356)
.+++++|+|+|.+|..+|..|.+.|.+|+++++.+..
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~ 54 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYA 54 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 5789999999999999999999999999999987653
No 288
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=95.95 E-value=0.0064 Score=59.52 Aligned_cols=37 Identities=22% Similarity=0.427 Sum_probs=34.1
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM 75 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l 75 (356)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~G 75 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIG 75 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSB
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 3689999999999999999999999999999988764
No 289
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=95.91 E-value=0.0063 Score=57.95 Aligned_cols=36 Identities=17% Similarity=0.298 Sum_probs=33.4
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM 75 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l 75 (356)
.+++|||+|..|+.+|..|++.|.+|+++|+++++.
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIG 39 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcC
Confidence 589999999999999999999999999999987764
No 290
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=95.83 E-value=0.005 Score=57.42 Aligned_cols=32 Identities=25% Similarity=0.400 Sum_probs=30.2
Q ss_pred cEEEECCchHHHHHHHHHHHCC------CcEEEEeeCC
Q 018416 41 NAVVIGGGYIGMECAASLVINK------INVTMVFPEA 72 (356)
Q Consensus 41 ~vvVvGgG~iGlE~A~~L~~~G------~~Vtlv~~~~ 72 (356)
+|+|||||.+|+-+|..|+++| .+|+|+++.+
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6999999999999999999998 8999999875
No 291
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.81 E-value=0.0041 Score=60.44 Aligned_cols=78 Identities=19% Similarity=0.300 Sum_probs=57.1
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEE
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVA 117 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~ 117 (356)
.+++++|||.|.+|+.+|..|.++|++|+..+.++.... . ..|+ .|+++..+....+ .
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~---~--------~~l~-~G~~~~~g~~~~~----------~ 61 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPG---L--------DKLP-EAVERHTGSLNDE----------W 61 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTT---G--------GGSC-TTSCEEESSCCHH----------H
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcch---h--------HHhh-CCCEEEECCCcHH----------H
Confidence 578999999999999999999999999999998764211 1 3355 7888876642100 0
Q ss_pred EEeCCCcEEecCeEEEecCCCCCchhh
Q 018416 118 VNLRDGNRLPTDMVVVGIGIRPNTSLF 144 (356)
Q Consensus 118 v~~~~g~~i~~D~vi~a~G~~p~~~l~ 144 (356)
+. .+|.||+++|..|+...+
T Consensus 62 --~~-----~~d~vV~s~gi~~~~p~~ 81 (439)
T 2x5o_A 62 --LM-----AADLIVASPGIALAHPSL 81 (439)
T ss_dssp --HH-----TCSEEEECTTSCTTCHHH
T ss_pred --hc-----cCCEEEeCCCCCCCCHHH
Confidence 11 379999999988765543
No 292
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=95.75 E-value=0.01 Score=58.62 Aligned_cols=77 Identities=16% Similarity=0.126 Sum_probs=58.0
Q ss_pred CCCcEEEECCchHHHH-HHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEE
Q 018416 38 SGGNAVVIGGGYIGME-CAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVV 116 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE-~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~ 116 (356)
..+++.|||-|-+|+. +|..|.++|.+|+..+..+. + ..+.|++.||+++.+.....
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~-------~-----~~~~l~~~gi~~~~g~~~~~---------- 78 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPN-------S-----VTQHLTALGAQIYFHHRPEN---------- 78 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCC-------H-----HHHHHHHTTCEEESSCCGGG----------
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCC-------H-----HHHHHHHCCCEEECCCCHHH----------
Confidence 4689999999999996 89999999999999986532 1 23467888999987632110
Q ss_pred EEEeCCCcEEecCeEEEecCCCCCchhh
Q 018416 117 AVNLRDGNRLPTDMVVVGIGIRPNTSLF 144 (356)
Q Consensus 117 ~v~~~~g~~i~~D~vi~a~G~~p~~~l~ 144 (356)
+ ..+|+||+++|..|+...+
T Consensus 79 ---~-----~~~d~vV~Spgi~~~~p~~ 98 (494)
T 4hv4_A 79 ---V-----LDASVVVVSTAISADNPEI 98 (494)
T ss_dssp ---G-----TTCSEEEECTTSCTTCHHH
T ss_pred ---c-----CCCCEEEECCCCCCCCHHH
Confidence 1 1389999999998876543
No 293
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=95.73 E-value=0.0087 Score=57.39 Aligned_cols=37 Identities=24% Similarity=0.331 Sum_probs=33.6
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM 75 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l 75 (356)
..+++|||+|+.|+-+|..|++.|.+|+|+++++++.
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~G 65 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIG 65 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCC
Confidence 3479999999999999999999999999999987653
No 294
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=95.72 E-value=0.021 Score=55.94 Aligned_cols=58 Identities=19% Similarity=0.241 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCC
Q 018416 81 PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIR 138 (356)
Q Consensus 81 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~ 138 (356)
.++.+.+.+.+++.|+++++++.|++|..++++++..|++.+|+++.||.||.+.+..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 4678888999999999999999999998756778888999999999999999999987
No 295
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.70 E-value=0.015 Score=47.56 Aligned_cols=34 Identities=18% Similarity=0.174 Sum_probs=31.4
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeC
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPE 71 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~ 71 (356)
..++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 3578999999999999999999999999999875
No 296
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=95.68 E-value=0.0089 Score=57.15 Aligned_cols=37 Identities=19% Similarity=0.317 Sum_probs=33.7
Q ss_pred CCcEEEECCchHHHHHHHHHHHC-CCcEEEEeeCCccC
Q 018416 39 GGNAVVIGGGYIGMECAASLVIN-KINVTMVFPEAHCM 75 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~-G~~Vtlv~~~~~~l 75 (356)
..+++|||+|..|+-+|..|++. |.+|+|+|+++++.
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~G 44 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIG 44 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 46899999999999999999999 99999999987653
No 297
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=95.65 E-value=0.011 Score=60.52 Aligned_cols=38 Identities=24% Similarity=0.396 Sum_probs=35.0
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCC
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA 76 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~ 76 (356)
+++|+|||+|+.|+.+|..|.+.|++|+++|+.+++..
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 144 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 57899999999999999999999999999999887654
No 298
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=95.61 E-value=0.008 Score=58.45 Aligned_cols=36 Identities=22% Similarity=0.345 Sum_probs=33.1
Q ss_pred CCcEEEECCchHHHHHHHHHHHCC--CcEEEEeeCCcc
Q 018416 39 GGNAVVIGGGYIGMECAASLVINK--INVTMVFPEAHC 74 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G--~~Vtlv~~~~~~ 74 (356)
..+|+|||+|..|+-+|..|++.| .+|+|+|+.+++
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~ 41 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERL 41 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCC
Confidence 368999999999999999999999 999999998765
No 299
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=95.58 E-value=0.0093 Score=56.38 Aligned_cols=35 Identities=23% Similarity=0.403 Sum_probs=32.3
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC
Q 018416 41 NAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM 75 (356)
Q Consensus 41 ~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l 75 (356)
+++|||+|..|+-+|..|++.|.+|+++|+++++.
T Consensus 3 ~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 37 (367)
T 1i8t_A 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIG 37 (367)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCC
Confidence 68999999999999999999999999999987653
No 300
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=95.56 E-value=0.012 Score=61.89 Aligned_cols=39 Identities=23% Similarity=0.387 Sum_probs=35.4
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCC
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA 76 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~ 76 (356)
..++|+|||+|+.|+.+|..|++.|++|+|+|+.+++..
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 315 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCC
Confidence 357899999999999999999999999999999887654
No 301
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.44 E-value=0.013 Score=47.04 Aligned_cols=33 Identities=21% Similarity=0.137 Sum_probs=30.8
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeC
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPE 71 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~ 71 (356)
.++++|+|+|.+|..+|..|.+.|.+|+++++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 478999999999999999999999999999874
No 302
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.38 E-value=0.022 Score=52.48 Aligned_cols=84 Identities=21% Similarity=0.237 Sum_probs=53.2
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEE
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVN 119 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~ 119 (356)
.++.|||+|.+|.-+|..|++.|.+|+++.|.+ .+.+++.|+.+.....-..+.+ ..+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~---------------~~~i~~~g~~~~~~~g~~~~~~------~~~- 60 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD---------------YEAIAGNGLKVFSINGDFTLPH------VKG- 60 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT---------------HHHHHHTCEEEEETTCCEEESC------CCE-
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc---------------HHHHHhCCCEEEcCCCeEEEee------cee-
Confidence 579999999999999999999999999998753 0335667877653211001100 001
Q ss_pred eCCCcE-EecCeEEEecCCCCCchhhh
Q 018416 120 LRDGNR-LPTDMVVVGIGIRPNTSLFE 145 (356)
Q Consensus 120 ~~~g~~-i~~D~vi~a~G~~p~~~l~~ 145 (356)
+.+-+. -++|+||+++-.....+.++
T Consensus 61 ~~~~~~~~~~D~vilavk~~~~~~~l~ 87 (312)
T 3hn2_A 61 YRAPEEIGPMDLVLVGLKTFANSRYEE 87 (312)
T ss_dssp ESCHHHHCCCSEEEECCCGGGGGGHHH
T ss_pred ecCHHHcCCCCEEEEecCCCCcHHHHH
Confidence 112111 25899999987665544443
No 303
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.33 E-value=0.015 Score=46.95 Aligned_cols=77 Identities=16% Similarity=0.242 Sum_probs=51.6
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEE
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAV 118 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v 118 (356)
.++++|+|.|.+|..+|..|.+.|.+|+++++.+. .. +.+++.|+.++.+... +.. +
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~---------~~----~~~~~~g~~~i~gd~~-------~~~---~ 63 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT---------RV----DELRERGVRAVLGNAA-------NEE---I 63 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH---------HH----HHHHHTTCEEEESCTT-------SHH---H
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH---------HH----HHHHHcCCCEEECCCC-------CHH---H
Confidence 46899999999999999999999999999987532 22 2345578876644210 000 0
Q ss_pred EeCCCcEEecCeEEEecCCCC
Q 018416 119 NLRDGNRLPTDMVVVGIGIRP 139 (356)
Q Consensus 119 ~~~~g~~i~~D~vi~a~G~~p 139 (356)
+..-..-.+|.++++++...
T Consensus 64 -l~~a~i~~ad~vi~~~~~~~ 83 (140)
T 3fwz_A 64 -MQLAHLECAKWLILTIPNGY 83 (140)
T ss_dssp -HHHTTGGGCSEEEECCSCHH
T ss_pred -HHhcCcccCCEEEEECCChH
Confidence 00001125899999998643
No 304
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.33 E-value=0.014 Score=46.30 Aligned_cols=33 Identities=21% Similarity=0.304 Sum_probs=29.9
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeC
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPE 71 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~ 71 (356)
..+++|+|+|.+|..+|..|.+.|.+|+++++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 468999999999999999999999999999864
No 305
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=95.32 E-value=0.017 Score=56.66 Aligned_cols=36 Identities=22% Similarity=0.160 Sum_probs=33.3
Q ss_pred CCcEEEECCchHHHHHHHHHHHCC-CcEEEEeeCCcc
Q 018416 39 GGNAVVIGGGYIGMECAASLVINK-INVTMVFPEAHC 74 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G-~~Vtlv~~~~~~ 74 (356)
..+++|||+|+.|+-+|..|++.| .+|+++|+.+++
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 468999999999999999999998 799999998765
No 306
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.10 E-value=0.022 Score=45.35 Aligned_cols=34 Identities=24% Similarity=0.091 Sum_probs=30.7
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeC
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPE 71 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~ 71 (356)
..++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4578999999999999999999999999999864
No 307
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=95.10 E-value=0.026 Score=52.56 Aligned_cols=78 Identities=15% Similarity=0.248 Sum_probs=51.1
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEE
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAV 118 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v 118 (356)
..++.|||+|.+|.-+|..|++.|.+|+++.|.++ .+.+++.|+.+..... .... . + ..
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~~~--------------~~~~~~~g~~~~~~~~--~~~~--~--~-~~ 61 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARGAT--------------LQALQTAGLRLTEDGA--THTL--P--V-RA 61 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCHHH--------------HHHHHHTCEEEEETTE--EEEE--C--C-EE
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEEChHH--------------HHHHHHCCCEEecCCC--eEEE--e--e-eE
Confidence 36899999999999999999999999999976321 2345677887653211 1110 0 0 11
Q ss_pred EeCCCcE-EecCeEEEecCCC
Q 018416 119 NLRDGNR-LPTDMVVVGIGIR 138 (356)
Q Consensus 119 ~~~~g~~-i~~D~vi~a~G~~ 138 (356)
..+-+. -++|+||+++...
T Consensus 62 -~~~~~~~~~~D~Vilavk~~ 81 (335)
T 3ghy_A 62 -THDAAALGEQDVVIVAVKAP 81 (335)
T ss_dssp -ESCHHHHCCCSEEEECCCHH
T ss_pred -ECCHHHcCCCCEEEEeCCch
Confidence 112111 3589999998753
No 308
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.09 E-value=0.015 Score=44.60 Aligned_cols=35 Identities=31% Similarity=0.290 Sum_probs=31.1
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCC-CcEEEEeeCC
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINK-INVTMVFPEA 72 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G-~~Vtlv~~~~ 72 (356)
..++++|+|+|.+|..++..|.+.| .+|+++.+.+
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 3578999999999999999999999 8999998753
No 309
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.83 E-value=0.04 Score=50.95 Aligned_cols=80 Identities=16% Similarity=0.261 Sum_probs=49.9
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEE
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVA 117 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~ 117 (356)
...++.|||+|.+|.-+|..|++.|.+|+++ +.+. . .+.+++.|+.+... .. .... .+ .
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~---------~----~~~i~~~g~~~~~~-~~-~~~~----~~-~ 76 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQ---------H----VQAIEATGLRLETQ-SF-DEQV----KV-S 76 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHH---------H----HHHHHHHCEEEECS-SC-EEEE----CC-E
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHh---------H----HHHHHhCCeEEEcC-CC-cEEE----ee-e
Confidence 4679999999999999999999999999999 5432 1 23345567766521 11 1110 00 1
Q ss_pred EEeCCCcE-EecCeEEEecCCCC
Q 018416 118 VNLRDGNR-LPTDMVVVGIGIRP 139 (356)
Q Consensus 118 v~~~~g~~-i~~D~vi~a~G~~p 139 (356)
. ..+-+. -.+|+||+++....
T Consensus 77 ~-~~~~~~~~~~D~vilavk~~~ 98 (318)
T 3hwr_A 77 A-SSDPSAVQGADLVLFCVKSTD 98 (318)
T ss_dssp E-ESCGGGGTTCSEEEECCCGGG
T ss_pred e-eCCHHHcCCCCEEEEEccccc
Confidence 1 122222 25899999987653
No 310
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=94.80 E-value=0.03 Score=54.09 Aligned_cols=38 Identities=13% Similarity=0.099 Sum_probs=34.2
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCC
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA 76 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~ 76 (356)
..+++|||+|..|+-+|..|++.|.+|+++|+.+.+..
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 43 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGG 43 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccc
Confidence 35899999999999999999999999999999876543
No 311
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=94.71 E-value=0.049 Score=54.07 Aligned_cols=80 Identities=20% Similarity=0.195 Sum_probs=59.3
Q ss_pred CCCcEEEECCchHHHH-HHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEE
Q 018416 38 SGGNAVVIGGGYIGME-CAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVV 116 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE-~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~ 116 (356)
+.+++.+||-|-+|+. +|..|.++|.+|+..+..+. ++ ..+.|++.||+++.+.....+
T Consensus 18 ~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~------~~-----~~~~L~~~gi~~~~G~~~~~~--------- 77 (524)
T 3hn7_A 18 QGMHIHILGICGTFMGSLALLARALGHTVTGSDANIY------PP-----MSTQLEQAGVTIEEGYLIAHL--------- 77 (524)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------TT-----HHHHHHHTTCEEEESCCGGGG---------
T ss_pred cCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCC------cH-----HHHHHHHCCCEEECCCCHHHc---------
Confidence 5799999999999997 68889999999999998642 11 245678889998766321110
Q ss_pred EEEeCCCcEEecCeEEEecCCCCCchhhh
Q 018416 117 AVNLRDGNRLPTDMVVVGIGIRPNTSLFE 145 (356)
Q Consensus 117 ~v~~~~g~~i~~D~vi~a~G~~p~~~l~~ 145 (356)
.-.+|+||+++|..|....+.
T Consensus 78 --------~~~~d~vV~Spgi~~~~p~l~ 98 (524)
T 3hn7_A 78 --------QPAPDLVVVGNAMKRGMDVIE 98 (524)
T ss_dssp --------CSCCSEEEECTTCCTTSHHHH
T ss_pred --------CCCCCEEEECCCcCCCCHHHH
Confidence 014799999999988776543
No 312
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=94.65 E-value=0.033 Score=54.15 Aligned_cols=38 Identities=24% Similarity=0.406 Sum_probs=33.5
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCC-cEEEEeeCCccCC
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKI-NVTMVFPEAHCMA 76 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~-~Vtlv~~~~~~l~ 76 (356)
..+++|||+|..|+-+|..|++.|. +|+++|+.+++..
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg 42 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGG 42 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCC
Confidence 4689999999999999999999998 8999999876543
No 313
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=94.50 E-value=0.032 Score=54.68 Aligned_cols=38 Identities=8% Similarity=0.034 Sum_probs=34.4
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR 77 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~ 77 (356)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+.+...
T Consensus 21 ~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~ 58 (475)
T 3p1w_A 21 YDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGE 58 (475)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCC
Confidence 47999999999999999999999999999999876543
No 314
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.45 E-value=0.028 Score=47.28 Aligned_cols=34 Identities=15% Similarity=0.096 Sum_probs=31.0
Q ss_pred CCcEEEECCchHHHHHHHHHHHC-CCcEEEEeeCC
Q 018416 39 GGNAVVIGGGYIGMECAASLVIN-KINVTMVFPEA 72 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~-G~~Vtlv~~~~ 72 (356)
+++++|+|.|.+|..+|..|.+. |.+|+++++.+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 56899999999999999999999 99999998753
No 315
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=94.39 E-value=0.029 Score=52.05 Aligned_cols=37 Identities=19% Similarity=0.362 Sum_probs=32.5
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCcc
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHC 74 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~ 74 (356)
..++|.|||+|.+|..+|..++..|++|++++..+..
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~ 41 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQ 41 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 3578999999999999999999999999999987653
No 316
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=94.38 E-value=0.16 Score=49.09 Aligned_cols=36 Identities=25% Similarity=0.399 Sum_probs=31.6
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
.+.+..|||.|+.|+-+|..|++.|++|+.+++.+.
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 578899999999999999999999999999987643
No 317
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.24 E-value=0.036 Score=50.24 Aligned_cols=34 Identities=26% Similarity=0.494 Sum_probs=32.2
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeC
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPE 71 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~ 71 (356)
.+++|+|||||.+|...+..|.+.|.+||++.+.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 5799999999999999999999999999999875
No 318
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=94.08 E-value=0.11 Score=50.56 Aligned_cols=55 Identities=24% Similarity=0.312 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHhCC-CEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCC
Q 018416 81 PKIASYYEEYYKSKG-VKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGI 137 (356)
Q Consensus 81 ~~~~~~~~~~l~~~G-V~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~ 137 (356)
..+.+.+.+.+++.| ++++++++|++|+..+++ ..|++.+|+++.+|.||+++|.
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~--v~v~~~~g~~~~ad~vI~a~~~ 310 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDA--ARVTARDGREFVAKRVVCTIPL 310 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSS--EEEEETTCCEEEEEEEEECCCG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCE--EEEEECCCCEEEcCEEEECCCH
Confidence 356777888888888 999999999999874433 3577888889999999999994
No 319
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=94.02 E-value=0.12 Score=47.57 Aligned_cols=35 Identities=14% Similarity=-0.039 Sum_probs=32.0
Q ss_pred CCcEEEECCchHHHHHHHHHHHCC-CcEEEEeeCCc
Q 018416 39 GGNAVVIGGGYIGMECAASLVINK-INVTMVFPEAH 73 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G-~~Vtlv~~~~~ 73 (356)
..+|.|||.|.+|.-+|..|++.| .+|+++++.+.
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~ 59 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFN 59 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 368999999999999999999999 99999988764
No 320
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=93.97 E-value=0.1 Score=47.86 Aligned_cols=76 Identities=24% Similarity=0.273 Sum_probs=49.6
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEE
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVN 119 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~ 119 (356)
.+++|||+|.+|.-+|..|+ .|.+|+++.|.+. - .+.+++.|+.+...... ... .+.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~---------~----~~~l~~~G~~~~~~~~~-~~~--------~~~ 59 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQE---------Q----AAAIQSEGIRLYKGGEE-FRA--------DCS 59 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHH---------H----HHHHHHHCEEEEETTEE-EEE--------CCE
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHH---------H----HHHHHhCCceEecCCCe-ecc--------ccc
Confidence 57999999999999999999 9999999987532 1 23455668877632211 110 111
Q ss_pred eCCCcEEecCeEEEecCCC
Q 018416 120 LRDGNRLPTDMVVVGIGIR 138 (356)
Q Consensus 120 ~~~g~~i~~D~vi~a~G~~ 138 (356)
......-++|+||+++-..
T Consensus 60 ~~~~~~~~~D~vilavK~~ 78 (307)
T 3ego_A 60 ADTSINSDFDLLVVTVKQH 78 (307)
T ss_dssp EESSCCSCCSEEEECCCGG
T ss_pred ccccccCCCCEEEEEeCHH
Confidence 1111123589999997643
No 321
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.90 E-value=0.04 Score=50.01 Aligned_cols=36 Identities=22% Similarity=0.228 Sum_probs=32.5
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCcc
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHC 74 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~ 74 (356)
-++|.|||+|.+|..+|..|++.|++|+++++.+..
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~ 39 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDA 39 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence 478999999999999999999999999999887543
No 322
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=93.71 E-value=0.09 Score=48.39 Aligned_cols=34 Identities=15% Similarity=0.014 Sum_probs=30.5
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCC-cEEEEeeCC
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKI-NVTMVFPEA 72 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~-~Vtlv~~~~ 72 (356)
-.+|.|||.|.+|.-+|..|.+.|. +|+++++.+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 3689999999999999999999999 999998753
No 323
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=93.68 E-value=0.025 Score=58.20 Aligned_cols=35 Identities=20% Similarity=0.245 Sum_probs=33.1
Q ss_pred CcEEEECCchHHHHHHHHHHHCC--------CcEEEEeeCC-cc
Q 018416 40 GNAVVIGGGYIGMECAASLVINK--------INVTMVFPEA-HC 74 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G--------~~Vtlv~~~~-~~ 74 (356)
++|+|||+|..|+.+|..|.+.| .+|+|+|+++ ++
T Consensus 57 ~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 57 YRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 58999999999999999999998 9999999998 77
No 324
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=93.41 E-value=0.062 Score=54.25 Aligned_cols=54 Identities=22% Similarity=0.319 Sum_probs=38.1
Q ss_pred ccCcEEEecccccCCCCEEEEccccccCccccCcccccc--cHHHHHHHHHHHHHHHcC
Q 018416 151 EKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLE--HVDSARKSAKHAVAAIME 207 (356)
Q Consensus 151 ~~g~I~vd~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~--~~~~A~~~g~~aa~~i~g 207 (356)
..|+|.||.++||++|++||+|+|+.... +|.. ++. ....+.-.|++|+.++..
T Consensus 358 t~GGi~vd~~~~~~IpGLyAaGe~a~~g~--hGan-rl~gnsl~~~~vfGr~Ag~~aa~ 413 (602)
T 1kf6_A 358 TMGGIETDQNCETRIKGLFAVGECSSVGL--HGAN-RLGSNSLAELVVFGRLAGEQATE 413 (602)
T ss_dssp ECCEEECCTTSBCSSBTEEECGGGEECSS--STTS-CCTTHHHHHHHHHHHHHHHHHHH
T ss_pred eCCeEEECCCCccccCCEEEccccccccc--cCCC-CCccHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999974211 1222 122 234566778888877753
No 325
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=93.15 E-value=0.094 Score=45.64 Aligned_cols=36 Identities=14% Similarity=0.177 Sum_probs=32.3
Q ss_pred CCCcEEEECC-chHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 38 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 38 ~~~~vvVvGg-G~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
.+++++|.|+ |++|..++..|.+.|.+|+++.|.+.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 5789999997 99999999999999999999998653
No 326
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.06 E-value=0.043 Score=44.23 Aligned_cols=34 Identities=21% Similarity=0.355 Sum_probs=31.0
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeC
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPE 71 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~ 71 (356)
.+++++|||+|.+|..++..|.+.|.+|+++.|.
T Consensus 20 ~~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 20 GGNKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CCCEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 4899999999999999999999999998888764
No 327
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.02 E-value=0.07 Score=46.19 Aligned_cols=31 Identities=23% Similarity=0.379 Sum_probs=29.2
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEeeC
Q 018416 41 NAVVIGGGYIGMECAASLVINKINVTMVFPE 71 (356)
Q Consensus 41 ~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~ 71 (356)
+++|+|+|.+|..+|..|.+.|.+|+++++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 6999999999999999999999999999864
No 328
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.92 E-value=0.13 Score=46.19 Aligned_cols=35 Identities=26% Similarity=0.285 Sum_probs=32.3
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
.++++|.|+|++|-.++..|.+.|.+|+.+.|.+.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 47899999999999999999999999999998754
No 329
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=92.71 E-value=0.094 Score=52.08 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=30.9
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
-.++|||+|..|+-+|..|++.|.+|.++|+++
T Consensus 8 ~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~ 40 (546)
T 1kdg_A 8 YDYIIVGAGPGGIIAADRLSEAGKKVLLLERGG 40 (546)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred eeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 469999999999999999999999999999875
No 330
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=92.59 E-value=0.19 Score=45.41 Aligned_cols=47 Identities=21% Similarity=0.220 Sum_probs=38.7
Q ss_pred HHHHHHHHHhcCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 26 DANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 26 da~~i~~~l~~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
|..-+...++...+++++|+|+|-+|--++..|.+.|.+|+++.|.+
T Consensus 105 D~~Gf~~~L~~~~~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 105 DALGFYLSLKQKNYQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp HHHHHHHHCC---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred hHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 66667666654347899999999999999999999999999998875
No 331
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=92.52 E-value=0.22 Score=48.21 Aligned_cols=59 Identities=12% Similarity=0.149 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcC-CCcEEEEEeCCCcEEecCeEEEecCCCCC
Q 018416 81 PKIASYYEEYYKSKGVKFVKGTVLSSFDVDS-NGKVVAVNLRDGNRLPTDMVVVGIGIRPN 140 (356)
Q Consensus 81 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~-~g~v~~v~~~~g~~i~~D~vi~a~G~~p~ 140 (356)
..+.+.+.+.+++.|+++++++.|+++..+. ++++..|.+ +|+++.+|.||+++|..|.
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 4678888888999999999999999998632 566666766 5888999999999997643
No 332
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=92.51 E-value=0.22 Score=48.50 Aligned_cols=79 Identities=14% Similarity=0.193 Sum_probs=53.6
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEE
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVA 117 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~ 117 (356)
.+++++|||+|.+|...+..|.+.|.+|+++.+. +.+++ .+..++.+++++.+.-
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~-------~~~~~----~~l~~~~~i~~~~~~~-------------- 65 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT-------FIPQF----TVWANEGMLTLVEGPF-------------- 65 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS-------CCHHH----HHHHTTTSCEEEESSC--------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC-------CCHHH----HHHHhcCCEEEEECCC--------------
Confidence 5789999999999999999999999999999863 34443 2222335666654321
Q ss_pred EEeCCCcEEecCeEEEecCCCC-Cchhh
Q 018416 118 VNLRDGNRLPTDMVVVGIGIRP-NTSLF 144 (356)
Q Consensus 118 v~~~~g~~i~~D~vi~a~G~~p-~~~l~ 144 (356)
..+..-.+|+||.++|... |..+.
T Consensus 66 ---~~~~l~~~~lVi~at~~~~~n~~i~ 90 (457)
T 1pjq_A 66 ---DETLLDSCWLAIAATDDDTVNQRVS 90 (457)
T ss_dssp ---CGGGGTTCSEEEECCSCHHHHHHHH
T ss_pred ---CccccCCccEEEEcCCCHHHHHHHH
Confidence 1111114899999998663 44433
No 333
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=92.45 E-value=0.085 Score=48.15 Aligned_cols=84 Identities=14% Similarity=0.089 Sum_probs=51.5
Q ss_pred CcEEEECCchHHHHHHHHHHHC-----C-CcEEEEeeCCccCCccCCHHHHHHHHHHHHh-CCCEEEeCCeeeEEEEcCC
Q 018416 40 GNAVVIGGGYIGMECAASLVIN-----K-INVTMVFPEAHCMARLFTPKIASYYEEYYKS-KGVKFVKGTVLSSFDVDSN 112 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~-----G-~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~-~GV~v~~~~~v~~i~~~~~ 112 (356)
.++.|||+|.+|.-+|..|.+. | .+|+++.| +. . .+.+.+ .|+.+...... ....
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~---~----------~~~l~~~~g~~~~~~~~~-~~~~--- 70 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GA---H----------LEAIRAAGGLRVVTPSRD-FLAR--- 70 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HH---H----------HHHHHHHTSEEEECSSCE-EEEC---
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HH---H----------HHHHHhcCCeEEEeCCCC-eEEe---
Confidence 4799999999999999999998 9 99999976 21 1 233445 68776531110 0100
Q ss_pred CcEEEEEeCCCcE-EecCeEEEecCCCCCchhh
Q 018416 113 GKVVAVNLRDGNR-LPTDMVVVGIGIRPNTSLF 144 (356)
Q Consensus 113 g~v~~v~~~~g~~-i~~D~vi~a~G~~p~~~l~ 144 (356)
.+ .+. ++.+. -.+|.||+++......+.+
T Consensus 71 -~~-~~~-~~~~~~~~~D~vil~vk~~~~~~v~ 100 (317)
T 2qyt_A 71 -PT-CVT-DNPAEVGTVDYILFCTKDYDMERGV 100 (317)
T ss_dssp -CS-EEE-SCHHHHCCEEEEEECCSSSCHHHHH
T ss_pred -cc-eEe-cCccccCCCCEEEEecCcccHHHHH
Confidence 00 111 12111 2589999998866543333
No 334
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=92.36 E-value=0.14 Score=48.97 Aligned_cols=36 Identities=17% Similarity=0.178 Sum_probs=32.9
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
++.+|+|+|+|.+|+.+|..+...|.+|+++++.+.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 578999999999999999999999999999988753
No 335
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.34 E-value=0.1 Score=49.46 Aligned_cols=36 Identities=19% Similarity=0.149 Sum_probs=33.1
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
++++|+|+|+|.+|..+|..+...|.+|+++++.+.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 578999999999999999999999999999988754
No 336
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=92.33 E-value=0.11 Score=49.90 Aligned_cols=58 Identities=16% Similarity=0.269 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCCCC
Q 018416 81 PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPN 140 (356)
Q Consensus 81 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~ 140 (356)
..+.+.+.+.+++.|+++++++.|++|.. +++.+..+. .+|+++.+|.||+++|..+.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~-~~~~v~~v~-~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIM-ENGKVVGVK-SEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEE-ETTEEEEEE-ETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEE-eCCEEEEEE-ECCeEEECCEEEECCCCCcc
Confidence 46778888888899999999999999986 456655555 47889999999999997763
No 337
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=92.09 E-value=0.1 Score=48.28 Aligned_cols=35 Identities=20% Similarity=0.395 Sum_probs=31.8
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
-++|.|||+|.+|.-+|..|++.|++|+++++.+.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 47899999999999999999999999999988654
No 338
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=92.00 E-value=0.54 Score=43.27 Aligned_cols=56 Identities=20% Similarity=0.253 Sum_probs=41.6
Q ss_pred CCcEEEECC-chHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEEEe
Q 018416 39 GGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVK 100 (356)
Q Consensus 39 ~~~vvVvGg-G~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v~~ 100 (356)
.++|+|.|+ |++|-.++..|.+.|.+|+++.|.+. .+++-.+. .+.+...+++++.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~-----~~~~~~~~-~~~l~~~~v~~~~ 66 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGP-----RSPSKAKI-FKALEDKGAIIVY 66 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSC-----CCHHHHHH-HHHHHHTTCEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCC-----CChhHHHH-HHHHHhCCcEEEE
Confidence 468999997 99999999999999999999999763 13333332 2345667777764
No 339
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=92.00 E-value=0.12 Score=51.36 Aligned_cols=56 Identities=13% Similarity=0.103 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHh-CCCEEEeCCeeeEEEEcCCC------cEEEEEeC---CCc--EEecCeEEEecCC
Q 018416 82 KIASYYEEYYKS-KGVKFVKGTVLSSFDVDSNG------KVVAVNLR---DGN--RLPTDMVVVGIGI 137 (356)
Q Consensus 82 ~~~~~~~~~l~~-~GV~v~~~~~v~~i~~~~~g------~v~~v~~~---~g~--~i~~D~vi~a~G~ 137 (356)
.+...+.+.+++ .||+++.++.++++..++++ ++..+... +|+ .+.++.||+|+|.
T Consensus 139 ~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 206 (540)
T 1chu_A 139 EVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGG 206 (540)
T ss_dssp ---CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCC
Confidence 444555667777 79999999999999863334 66655553 565 6899999999984
No 340
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=91.99 E-value=0.16 Score=45.89 Aligned_cols=33 Identities=30% Similarity=0.407 Sum_probs=30.4
Q ss_pred cEEEECC-chHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 41 NAVVIGG-GYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 41 ~vvVvGg-G~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
||+|.|| |++|-.++..|.++|++|+.+.|.+.
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 6899997 99999999999999999999998764
No 341
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=91.97 E-value=0.43 Score=42.27 Aligned_cols=55 Identities=27% Similarity=0.187 Sum_probs=39.6
Q ss_pred HhcCCCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCE
Q 018416 34 MKSCSGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVK 97 (356)
Q Consensus 34 l~~~~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~ 97 (356)
+....+|.++|.| +|.+|.++|..|++.|.+|.++.|.. +-.+.+.+.+.+.+.+
T Consensus 24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~~ 79 (262)
T 3rkr_A 24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDV---------EKLRAVEREIVAAGGE 79 (262)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH---------HHHHHHHHHHHHTTCE
T ss_pred hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCH---------HHHHHHHHHHHHhCCc
Confidence 3334678888888 58999999999999999999987643 3334455566665543
No 342
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=91.94 E-value=0.17 Score=43.67 Aligned_cols=36 Identities=19% Similarity=0.271 Sum_probs=31.6
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
...++.|||.|.+|.-+|..|.+.|.+|+++++.+.
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 467899999999999999999999999999987654
No 343
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.94 E-value=0.13 Score=45.97 Aligned_cols=34 Identities=15% Similarity=0.185 Sum_probs=31.4
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
.++|+|.|+|++|-.++..|.+.|.+|+.+.|.+
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 3689999999999999999999999999998865
No 344
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=91.89 E-value=0.15 Score=48.75 Aligned_cols=36 Identities=17% Similarity=0.170 Sum_probs=32.7
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
++++|+|+|+|.+|..++..+...|.+|+++++.+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 478999999999999999999999999999987653
No 345
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=91.85 E-value=0.17 Score=42.47 Aligned_cols=36 Identities=19% Similarity=0.283 Sum_probs=32.2
Q ss_pred CCcEEEECC-chHHHHHHHHHHHCCCcEEEEeeCCcc
Q 018416 39 GGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAHC 74 (356)
Q Consensus 39 ~~~vvVvGg-G~iGlE~A~~L~~~G~~Vtlv~~~~~~ 74 (356)
.++++|.|+ |++|..++..|.+.|.+|+++.|.+.-
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~ 39 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSR 39 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGG
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhh
Confidence 368999997 999999999999999999999987653
No 346
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=91.74 E-value=0.48 Score=42.03 Aligned_cols=55 Identities=16% Similarity=0.308 Sum_probs=42.0
Q ss_pred CCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEE
Q 018416 38 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKF 98 (356)
Q Consensus 38 ~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v 98 (356)
.+|.++|.| ++.+|.++|..|++.|.+|.++.+..+ +.+-.+.+.+.+++.|.++
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~ 65 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAK------DSDTANKLKDELEDQGAKV 65 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGG------GHHHHHHHHHHHHTTTCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCcc------CHHHHHHHHHHHHhcCCcE
Confidence 578888888 578999999999999999999877532 4455566666777766543
No 347
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.65 E-value=0.18 Score=47.81 Aligned_cols=36 Identities=19% Similarity=0.132 Sum_probs=32.8
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
++++|+|+|+|.+|..++..+...|.+|+++++.+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 588999999999999999999999999999987653
No 348
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=91.61 E-value=0.17 Score=46.17 Aligned_cols=35 Identities=26% Similarity=0.314 Sum_probs=31.8
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
-++|.|||+|.+|.-+|..|++.|++|+++++.+.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~ 49 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTED 49 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 36899999999999999999999999999988654
No 349
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=91.59 E-value=0.76 Score=41.06 Aligned_cols=61 Identities=18% Similarity=0.104 Sum_probs=43.9
Q ss_pred CCCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCCccCCc----cCCHHHHHHHHHHHHhCCCE
Q 018416 37 CSGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCMAR----LFTPKIASYYEEYYKSKGVK 97 (356)
Q Consensus 37 ~~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~----~~d~~~~~~~~~~l~~~GV~ 97 (356)
..+|.++|.| +|.+|.++|..|++.|.+|.++.+....... .-+++-.+.+.+.+++.|.+
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRK 78 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCC
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCe
Confidence 3678899988 5799999999999999999999885432211 01455556666677766544
No 350
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=91.55 E-value=0.35 Score=44.48 Aligned_cols=46 Identities=15% Similarity=0.091 Sum_probs=36.3
Q ss_pred HHHHHHHHhcCCCCcEEEECC-chHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 27 ANRLVNVMKSCSGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 27 a~~i~~~l~~~~~~~vvVvGg-G~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
.+++...+.. .+++|+|.|+ |++|..++..|.+.|.+|+.+.|.+.
T Consensus 14 ~~~~~~~~~~-~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 60 (351)
T 3ruf_A 14 YEEITQQLIF-SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFST 60 (351)
T ss_dssp HHHHHHHHHH-SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred HhhHHhhCCC-CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3444333332 5789999995 99999999999999999999998754
No 351
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=91.55 E-value=0.57 Score=47.53 Aligned_cols=61 Identities=13% Similarity=0.120 Sum_probs=51.0
Q ss_pred CHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCC-CcEEEEEeCCCcEEecCeEEEecCCCCC
Q 018416 80 TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSN-GKVVAVNLRDGNRLPTDMVVVGIGIRPN 140 (356)
Q Consensus 80 d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~-g~v~~v~~~~g~~i~~D~vi~a~G~~p~ 140 (356)
..++.+.+.+.++..|.++++++.|.+|..+++ |++..+.+.+|+++.||.||......|.
T Consensus 377 ~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp~ 438 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSE 438 (650)
T ss_dssp TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBCT
T ss_pred hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcCH
Confidence 347888888899999999999999999976443 7787888788999999999997776654
No 352
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.55 E-value=0.34 Score=43.54 Aligned_cols=46 Identities=20% Similarity=0.193 Sum_probs=37.2
Q ss_pred HHHHHHHHHhc----CCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeC
Q 018416 26 DANRLVNVMKS----CSGGNAVVIGGGYIGMECAASLVINKINVTMVFPE 71 (356)
Q Consensus 26 da~~i~~~l~~----~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~ 71 (356)
|...+...++. ..+++++|+|+|-+|..+|..|.+.|.+|+++.|.
T Consensus 102 D~~G~~~~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 102 DGVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CHHHHHHHHHhcCcCcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 45555555532 35789999999999999999999999999998765
No 353
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.51 E-value=0.16 Score=47.90 Aligned_cols=35 Identities=23% Similarity=0.340 Sum_probs=32.1
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
++++++|+|+|.+|..+|..++..|.+|+++++.+
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 57899999999999999999999999999998753
No 354
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.51 E-value=0.19 Score=46.98 Aligned_cols=34 Identities=21% Similarity=0.266 Sum_probs=31.3
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
|+|+|+|||..|.+++..+++.|++|.+++..+.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 6899999999999999999999999999987653
No 355
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=91.50 E-value=0.3 Score=47.05 Aligned_cols=54 Identities=22% Similarity=0.375 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCC
Q 018416 82 KIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGI 137 (356)
Q Consensus 82 ~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~ 137 (356)
.+.+.+.+.+++.|+++++++.|++|+.++++ ...|.+ ++.++.+|.||++++.
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~-~~~v~~-~~~~~~ad~vv~a~p~ 288 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEG-RWKVSL-RDSSLEADHVISAIPA 288 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGG-CEEEEC-SSCEEEESEEEECSCH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCc-eEEEEE-CCeEEEcCEEEECCCH
Confidence 57788888999999999999999999874333 234554 5668999999999974
No 356
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=91.36 E-value=0.14 Score=50.36 Aligned_cols=33 Identities=27% Similarity=0.365 Sum_probs=30.2
Q ss_pred cEEEECCchHHHHHHHHHHH-CCCcEEEEeeCCc
Q 018416 41 NAVVIGGGYIGMECAASLVI-NKINVTMVFPEAH 73 (356)
Q Consensus 41 ~vvVvGgG~iGlE~A~~L~~-~G~~Vtlv~~~~~ 73 (356)
.++|||+|..|+-+|..|++ .|.+|.|+|+++.
T Consensus 19 D~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 19 DIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred eEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 69999999999999999998 5789999999864
No 357
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=91.29 E-value=0.81 Score=40.95 Aligned_cols=59 Identities=20% Similarity=0.097 Sum_probs=42.3
Q ss_pred CCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCCccCCcc-------CCHHHHHHHHHHHHhCCC
Q 018416 38 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCMARL-------FTPKIASYYEEYYKSKGV 96 (356)
Q Consensus 38 ~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~-------~d~~~~~~~~~~l~~~GV 96 (356)
.+|.++|.| ++.||.++|..|++.|.+|.++.+.+...... -+++-.+.+.+.++..+.
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNR 76 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCC
Confidence 578899998 47899999999999999999998874322110 135555556666666554
No 358
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=91.26 E-value=0.2 Score=44.90 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=30.7
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 41 NAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 41 ~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
++.|||+|.+|.-+|..|.+.|.+|+++.|.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 689999999999999999999999999988764
No 359
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=91.25 E-value=0.16 Score=51.84 Aligned_cols=56 Identities=11% Similarity=0.060 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEe---CCCc--EEecCeEEEecCC
Q 018416 81 PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNL---RDGN--RLPTDMVVVGIGI 137 (356)
Q Consensus 81 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~---~~g~--~i~~D~vi~a~G~ 137 (356)
..+...+.+.+++.||+++.++.++++.. +++++..+.. .+|+ .+.++.||+|+|-
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 218 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIH-QDGKCYGAVVRDLVTGDIIAYVAKGTLIATGG 218 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEe-cCCEEEEEEEEECCCCcEEEEEcCEEEEccCc
Confidence 35667777778888999999999999976 4566655544 4665 4899999999884
No 360
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=91.21 E-value=0.15 Score=43.67 Aligned_cols=40 Identities=25% Similarity=0.357 Sum_probs=31.4
Q ss_pred cccccCCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcCCC
Q 018416 159 GRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPD 209 (356)
Q Consensus 159 ~~l~ts~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 209 (356)
++++++.++||++||++... .+..|+..|+.||+.|+...
T Consensus 288 ~~~~~~~~~v~l~GDa~~g~-----------gv~~A~~sG~~aA~~I~~~L 327 (336)
T 3kkj_A 288 GALSDADLGIYVCGDWCLSG-----------RVEGAWLSGQEAARRLLEHL 327 (336)
T ss_dssp SSEEETTTTEEECCGGGTTS-----------SHHHHHHHHHHHHHHHHHHT
T ss_pred cceeeCCCCEEEEecccCCc-----------CHHHHHHHHHHHHHHHHHHh
Confidence 44566789999999987542 46789999999999987543
No 361
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=91.18 E-value=0.23 Score=42.22 Aligned_cols=32 Identities=22% Similarity=0.225 Sum_probs=29.4
Q ss_pred cEEEECC-chHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 41 NAVVIGG-GYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 41 ~vvVvGg-G~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
+|+|.|+ |++|..++..|.+.|.+|+++.|.+
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 6899995 9999999999999999999998864
No 362
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=91.17 E-value=0.16 Score=45.10 Aligned_cols=35 Identities=17% Similarity=0.320 Sum_probs=31.6
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCC-cEEEEeeCC
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKI-NVTMVFPEA 72 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~-~Vtlv~~~~ 72 (356)
..++|+|||+|-+|.++|..|++.|. +++++++..
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 35799999999999999999999997 899998864
No 363
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=91.02 E-value=0.18 Score=47.72 Aligned_cols=35 Identities=26% Similarity=0.209 Sum_probs=32.1
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
++++++|+|+|.+|..+|..+...|.+|+++++.+
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 67899999999999999999999999999987753
No 364
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=91.00 E-value=0.23 Score=45.65 Aligned_cols=35 Identities=20% Similarity=0.166 Sum_probs=30.2
Q ss_pred CCCcEEEECC-chHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 38 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 38 ~~~~vvVvGg-G~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
++++|+|.|+ |++|..++..|.+.|.+|+.+.|.+
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~ 53 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRP 53 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCC
Confidence 5789999997 9999999999999999999998875
No 365
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=90.92 E-value=0.78 Score=40.82 Aligned_cols=59 Identities=19% Similarity=0.142 Sum_probs=41.5
Q ss_pred CCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCCccCCc---cCCHHHHHHHHHHHHhCCC
Q 018416 38 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCMAR---LFTPKIASYYEEYYKSKGV 96 (356)
Q Consensus 38 ~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~---~~d~~~~~~~~~~l~~~GV 96 (356)
.+|.++|.| +|.||.++|..|++.|.+|.++.+.+..... .-+++-.+...+.+++.+.
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS 74 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCC
Confidence 578899998 5799999999999999999999887543221 0134444555555555443
No 366
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=90.90 E-value=0.12 Score=52.72 Aligned_cols=56 Identities=14% Similarity=0.198 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHhC--CCEEEeCCeeeEEEEcCC--CcEEEEEe---CCCc--EEecCeEEEecC
Q 018416 81 PKIASYYEEYYKSK--GVKFVKGTVLSSFDVDSN--GKVVAVNL---RDGN--RLPTDMVVVGIG 136 (356)
Q Consensus 81 ~~~~~~~~~~l~~~--GV~v~~~~~v~~i~~~~~--g~v~~v~~---~~g~--~i~~D~vi~a~G 136 (356)
..+...+.+.+++. ||+++.++.++++..+++ |++..+.. .+|+ .+.++.||+|+|
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATG 230 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACG 230 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCC
Confidence 35566677777776 999999999988876433 37766643 3454 588999999998
No 367
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=90.87 E-value=0.2 Score=44.28 Aligned_cols=36 Identities=25% Similarity=0.291 Sum_probs=32.5
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
..+++.|||.|.+|.-+|..|.+.|.+|++..|.+.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 578999999999999999999999999999988654
No 368
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=90.85 E-value=0.23 Score=48.86 Aligned_cols=34 Identities=29% Similarity=0.192 Sum_probs=31.5
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
-.++|||+|..|+-+|..|++.|.+|.++|+++.
T Consensus 6 ~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 39 (504)
T 1n4w_A 6 VPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQL 39 (504)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 3699999999999999999999999999998874
No 369
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=90.72 E-value=0.27 Score=47.61 Aligned_cols=58 Identities=16% Similarity=0.240 Sum_probs=42.6
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC-------CccCCHHHHHHHHHHHHhCCCE
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM-------ARLFTPKIASYYEEYYKSKGVK 97 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l-------~~~~d~~~~~~~~~~l~~~GV~ 97 (356)
.++.|||.|++|+-+|..|++.|++|+-++..+.-. .+..++.+.+.+.+.+++....
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~ 86 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLS 86 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEE
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCee
Confidence 579999999999999999999999999997654311 1124566666666666555443
No 370
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=90.66 E-value=0.27 Score=44.44 Aligned_cols=36 Identities=28% Similarity=0.337 Sum_probs=32.3
Q ss_pred CCCcEEEECC-chHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 38 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 38 ~~~~vvVvGg-G~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
..++|+|.|+ |++|..++..|.+.|.+|+.+.|.+.
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 3689999997 99999999999999999999988765
No 371
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=90.57 E-value=0.63 Score=41.38 Aligned_cols=52 Identities=25% Similarity=0.373 Sum_probs=39.9
Q ss_pred CCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCE
Q 018416 38 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVK 97 (356)
Q Consensus 38 ~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~ 97 (356)
.+|+++|.| +|.+|.++|..|++.|.+|.++.|.+ ++..+.+.+.+++.+.+
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~ 80 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSN--------AEVADALKNELEEKGYK 80 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC--------HHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCC--------HHHHHHHHHHHHhcCCc
Confidence 578888888 57999999999999999999988743 34455566666666543
No 372
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=90.57 E-value=0.56 Score=45.45 Aligned_cols=61 Identities=20% Similarity=0.321 Sum_probs=43.0
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCC-------ccCCHHHHHHHHHHHHhCCCEEE
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA-------RLFTPKIASYYEEYYKSKGVKFV 99 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~-------~~~d~~~~~~~~~~l~~~GV~v~ 99 (356)
.-++.|||.|+.|+-+|..|++.|++|+++++.+.-.. +...+.+.+.+.+.+...++++-
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~t 75 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFT 75 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEE
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEE
Confidence 45899999999999999999999999999998765321 11344555555544444444443
No 373
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=90.53 E-value=0.28 Score=44.73 Aligned_cols=36 Identities=25% Similarity=0.301 Sum_probs=32.7
Q ss_pred CCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 37 CSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 37 ~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
..++++.|||.|.+|..+|..|...|.+|++++|.+
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 368999999999999999999999999999998753
No 374
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=90.53 E-value=0.35 Score=43.44 Aligned_cols=47 Identities=15% Similarity=0.196 Sum_probs=38.2
Q ss_pred HHHHHHHHHhc----CCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 26 DANRLVNVMKS----CSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 26 da~~i~~~l~~----~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
|...+...++. ..+++++|+|+|-+|..+|..|.+.|.+|+++.|..
T Consensus 102 D~~G~~~~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 102 DGIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CHHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 55556655543 257899999999999999999999999999998753
No 375
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=90.52 E-value=0.27 Score=44.92 Aligned_cols=36 Identities=25% Similarity=0.144 Sum_probs=31.9
Q ss_pred CCCcEEEECC-chHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 38 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 38 ~~~~vvVvGg-G~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
.+++++|.|+ |++|..++..|.+.|.+|+++.|.+.
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 38 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSG 38 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCc
Confidence 3578999996 99999999999999999999988754
No 376
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=90.52 E-value=0.34 Score=44.67 Aligned_cols=37 Identities=16% Similarity=0.150 Sum_probs=33.9
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCcc
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHC 74 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~ 74 (356)
.++++.|||-|.+|-.+|..|...|.+|+.+.+.+..
T Consensus 138 ~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~ 174 (315)
T 3pp8_A 138 EEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKS 174 (315)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchh
Confidence 5789999999999999999999999999999887653
No 377
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=90.49 E-value=0.29 Score=44.49 Aligned_cols=36 Identities=28% Similarity=0.368 Sum_probs=32.7
Q ss_pred CCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 37 CSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 37 ~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
..++++.|||.|.+|..+|..|...|.+|+++++.+
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 368999999999999999999999999999998753
No 378
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=90.49 E-value=0.26 Score=44.51 Aligned_cols=34 Identities=26% Similarity=0.222 Sum_probs=31.3
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
+++.|||.|.+|.-+|..|.+.|++|++++|.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 5799999999999999999999999999988654
No 379
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=90.46 E-value=0.77 Score=41.18 Aligned_cols=57 Identities=16% Similarity=0.236 Sum_probs=40.6
Q ss_pred CCcEEEECC-chHHHHHHHHHHHCCCcEEEEeeCCccCCccCCH-HHHHHHHHHHHhCCCEEE
Q 018416 39 GGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAHCMARLFTP-KIASYYEEYYKSKGVKFV 99 (356)
Q Consensus 39 ~~~vvVvGg-G~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~-~~~~~~~~~l~~~GV~v~ 99 (356)
.++++|.|+ |++|-.++..|.+.|.+|+++.|.+. .. .++ +-.+.+ +.+...|++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~--~~-~~~~~~~~~~-~~l~~~~v~~v 60 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTI--TA-ANPETKEELI-DNYQSLGVILL 60 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSC--CS-SCHHHHHHHH-HHHHHTTCEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCc--cc-CChHHHHHHH-HHHHhCCCEEE
Confidence 368999996 99999999999999999999988752 11 233 322333 34556677665
No 380
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=90.45 E-value=0.15 Score=50.69 Aligned_cols=32 Identities=31% Similarity=0.401 Sum_probs=30.0
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 41 NAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 41 ~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 28 D~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~ 59 (536)
T 1ju2_A 28 DYVIVGGGTSGCPLAATLSE-KYKVLVLERGSL 59 (536)
T ss_dssp EEEEECCSTTHHHHHHHHTT-TSCEEEECSSBC
T ss_pred cEEEECccHHHHHHHHHHhc-CCcEEEEecCCC
Confidence 69999999999999999999 999999999854
No 381
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=90.37 E-value=0.22 Score=48.71 Aligned_cols=35 Identities=34% Similarity=0.402 Sum_probs=31.9
Q ss_pred CCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeC
Q 018416 37 CSGGNAVVIGGGYIGMECAASLVINKINVTMVFPE 71 (356)
Q Consensus 37 ~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~ 71 (356)
..+|+++|+|+|.+|..+|..|+..|.+|.++++.
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 36899999999999999999999999999988664
No 382
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=90.35 E-value=0.42 Score=43.10 Aligned_cols=48 Identities=6% Similarity=0.136 Sum_probs=37.9
Q ss_pred CHHHHHHHHHHHhcCCCCcEEEECCc-hHHHHHHHHHHHCCCcEEEEeeC
Q 018416 23 DLADANRLVNVMKSCSGGNAVVIGGG-YIGMECAASLVINKINVTMVFPE 71 (356)
Q Consensus 23 ~~~da~~i~~~l~~~~~~~vvVvGgG-~iGlE~A~~L~~~G~~Vtlv~~~ 71 (356)
|.....++.+... ..+++++|||.| .+|.-+|..|.+.|..||++++.
T Consensus 135 Tp~gv~~lL~~~~-l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~ 183 (276)
T 3ngx_A 135 TPRAVIDIMDYYG-YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK 183 (276)
T ss_dssp HHHHHHHHHHHHT-CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred cHHHHHHHHHHhC-cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3445555555544 579999999976 68999999999999999999763
No 383
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=90.33 E-value=0.2 Score=45.72 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=30.8
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
..|+|.|||.|.+|.-+|..|+ .|++|+++++.+
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 4689999999999999999999 999999998754
No 384
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=90.27 E-value=0.79 Score=41.13 Aligned_cols=58 Identities=22% Similarity=0.355 Sum_probs=41.7
Q ss_pred CCcEEEECC-chHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEEEe
Q 018416 39 GGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVK 100 (356)
Q Consensus 39 ~~~vvVvGg-G~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v~~ 100 (356)
.++++|.|+ |++|-.++..|.+.|.+|+++.|.+.-.. +++-.+.+ +.+...|++++.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~---~~~~~~~~-~~l~~~~v~~v~ 62 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASS---NSEKAQLL-ESFKASGANIVH 62 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTT---THHHHHHH-HHHHTTTCEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCccccc---CHHHHHHH-HHHHhCCCEEEE
Confidence 468999996 99999999999999999999988753210 23333322 345667777653
No 385
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=90.22 E-value=0.3 Score=46.11 Aligned_cols=35 Identities=23% Similarity=0.339 Sum_probs=32.5
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
++++++|+|+|.+|..++..+.++|++|.++++.+
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 57899999999999999999999999999998764
No 386
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=90.22 E-value=1.2 Score=39.66 Aligned_cols=59 Identities=12% Similarity=-0.037 Sum_probs=41.3
Q ss_pred CCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCCccCCcc---CCHHHHHHHHHHHHhCCC
Q 018416 38 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCMARL---FTPKIASYYEEYYKSKGV 96 (356)
Q Consensus 38 ~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~---~d~~~~~~~~~~l~~~GV 96 (356)
.+|.++|.| +|.||.++|..|++.|.+|.++.+........ -..+-.+.....+++.+.
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR 71 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCC
Confidence 578899998 57899999999999999999998874432210 124444455555665553
No 387
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=90.20 E-value=0.24 Score=46.56 Aligned_cols=35 Identities=29% Similarity=0.394 Sum_probs=31.9
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
++++|+|+|+|.+|..++..+...|.+|+++++.+
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 46899999999999999999999999999998754
No 388
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=90.18 E-value=1.2 Score=39.53 Aligned_cols=59 Identities=14% Similarity=0.045 Sum_probs=41.7
Q ss_pred CCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCCccCCc----cCCHHHHHHHHHHHHhCCC
Q 018416 38 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCMAR----LFTPKIASYYEEYYKSKGV 96 (356)
Q Consensus 38 ~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~----~~d~~~~~~~~~~l~~~GV 96 (356)
.+|.++|.| ++.||.++|..|++.|.+|.++.+....... .-+++-.+...+.+++.+.
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR 73 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC
Confidence 578888988 5789999999999999999999885432110 0145555555566666554
No 389
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=90.12 E-value=0.57 Score=42.27 Aligned_cols=34 Identities=32% Similarity=0.387 Sum_probs=31.4
Q ss_pred CCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeC
Q 018416 38 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPE 71 (356)
Q Consensus 38 ~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~ 71 (356)
.+++++|+| +|.+|..++..|.+.|.+|+++.|.
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 578999999 8999999999999999999998875
No 390
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=90.09 E-value=0.24 Score=47.58 Aligned_cols=35 Identities=29% Similarity=0.336 Sum_probs=32.3
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
.+++++|+|.|.+|..+|..|+..|.+|+++++.+
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 68999999999999999999999999999987653
No 391
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=90.02 E-value=0.25 Score=42.42 Aligned_cols=37 Identities=22% Similarity=0.356 Sum_probs=32.7
Q ss_pred CcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCCccCC
Q 018416 40 GNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCMA 76 (356)
Q Consensus 40 ~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~ 76 (356)
++++|.| +|++|..++..|.+.|.+|+++.|.+.-..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 42 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIK 42 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccch
Confidence 6899999 599999999999999999999999865443
No 392
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=89.92 E-value=0.35 Score=42.11 Aligned_cols=34 Identities=15% Similarity=0.033 Sum_probs=30.4
Q ss_pred CcEEEECC-chHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 40 GNAVVIGG-GYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 40 ~~vvVvGg-G~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
|+++|.|+ |.+|..++..|.+.|.+|+++.|.+.
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~ 36 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQA 36 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChh
Confidence 46889985 99999999999999999999988754
No 393
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=89.88 E-value=0.34 Score=41.37 Aligned_cols=32 Identities=22% Similarity=0.247 Sum_probs=29.2
Q ss_pred cEEEECC-chHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 41 NAVVIGG-GYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 41 ~vvVvGg-G~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
+++|.|+ |++|..++..|.+.|.+|+++.|.+
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 5899997 9999999999999999999998764
No 394
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=89.87 E-value=0.36 Score=41.63 Aligned_cols=33 Identities=18% Similarity=0.183 Sum_probs=29.8
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeC
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPE 71 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~ 71 (356)
..++.|||+|.+|..+|..|.+.|.+|++++|.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 468999999999999999999999999998765
No 395
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=89.86 E-value=0.29 Score=48.10 Aligned_cols=34 Identities=32% Similarity=0.311 Sum_probs=31.6
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
-.++|||+|..|+-+|..|++.|.+|.++|+++.
T Consensus 12 ~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 12 VPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 3699999999999999999999999999999864
No 396
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=89.85 E-value=1.2 Score=38.80 Aligned_cols=51 Identities=22% Similarity=0.194 Sum_probs=38.0
Q ss_pred CCCcEEEECC-chHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCE
Q 018416 38 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVK 97 (356)
Q Consensus 38 ~~~~vvVvGg-G~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~ 97 (356)
.+|.++|.|+ |.+|.++|..|++.|.+|.++.|.+ +-.+.+.+.+++.+-+
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~~ 59 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINA---------EAAEAVAKQIVADGGT 59 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH---------HHHHHHHHHHHHTTCE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH---------HHHHHHHHHHHhcCCc
Confidence 5788999984 8999999999999999999987642 3334445556555433
No 397
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=89.82 E-value=0.23 Score=45.09 Aligned_cols=34 Identities=24% Similarity=0.249 Sum_probs=31.3
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
.++.|||+|.+|.-+|..|.+.|.+|+++.|.+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~ 36 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAK 36 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCE
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccC
Confidence 4799999999999999999999999999998753
No 398
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=89.81 E-value=1.4 Score=39.88 Aligned_cols=59 Identities=15% Similarity=0.067 Sum_probs=42.6
Q ss_pred CCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCCccC----CccCCHHHHHHHHHHHHhCCCE
Q 018416 38 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCM----ARLFTPKIASYYEEYYKSKGVK 97 (356)
Q Consensus 38 ~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~~~l----~~~~d~~~~~~~~~~l~~~GV~ 97 (356)
.+|.++|.| ++.||.++|..|++.|.+|.++.+.+..- .. -+++-.+...+.+++.|.+
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 90 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPM-STPDDLAETVRQVEALGRR 90 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCC-CCHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccc-cCHHHHHHHHHHHHhcCCc
Confidence 578888888 47899999999999999999998874421 11 2355555556666666543
No 399
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=89.81 E-value=0.24 Score=44.92 Aligned_cols=32 Identities=19% Similarity=0.178 Sum_probs=29.7
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeC
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPE 71 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~ 71 (356)
.++.|||+|.+|.-+|..|.+.|.+|+++.|.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 47999999999999999999999999999764
No 400
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=89.80 E-value=0.33 Score=44.86 Aligned_cols=36 Identities=25% Similarity=0.384 Sum_probs=30.1
Q ss_pred CCCcEEEECC-chHHHHHHHHHHHCC-CcEEEEeeCCc
Q 018416 38 SGGNAVVIGG-GYIGMECAASLVINK-INVTMVFPEAH 73 (356)
Q Consensus 38 ~~~~vvVvGg-G~iGlE~A~~L~~~G-~~Vtlv~~~~~ 73 (356)
.+++++|.|+ |++|..++..|.+.| .+|+++.|.+.
T Consensus 45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~ 82 (357)
T 2x6t_A 45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD 82 (357)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCC
Confidence 4678999997 999999999999999 99999987653
No 401
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=89.69 E-value=0.36 Score=49.02 Aligned_cols=53 Identities=19% Similarity=0.056 Sum_probs=42.9
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhC
Q 018416 41 NAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSK 94 (356)
Q Consensus 41 ~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~ 94 (356)
.++|+|+|..+.-+|..|++.|++|.++++++++.....+..+ ..+.+++++.
T Consensus 10 D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~~l-~~l~~w~~~~ 62 (650)
T 1vg0_A 10 DVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSF-SGLLSWLKEY 62 (650)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECH-HHHHHHHHHT
T ss_pred CEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccccccH-HHHHHHHHHh
Confidence 7999999999999999999999999999999998776544443 3455555543
No 402
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=89.67 E-value=0.32 Score=47.66 Aligned_cols=52 Identities=15% Similarity=0.124 Sum_probs=41.9
Q ss_pred CCcEEEECCchHHHH-HHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEEEeCC
Q 018416 39 GGNAVVIGGGYIGME-CAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGT 102 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE-~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v~~~~ 102 (356)
.+++.|||-|-+|+. +|..|.++|.+|+..+.... + . .+.|++.|+++..+.
T Consensus 19 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~-------~-~----~~~l~~~gi~~~~g~ 71 (491)
T 2f00_A 19 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPN-------P-V----TQQLMNLGATIYFNH 71 (491)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCC-------H-H----HHHHHHTTCEEESSC
T ss_pred CCEEEEEEcCHHHHHHHHHHHHhCCCeEEEECCCCC-------H-H----HHHHHHCCCEEECCC
Confidence 578999999999998 99999999999999877541 1 1 235778899987664
No 403
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=89.66 E-value=0.28 Score=47.79 Aligned_cols=52 Identities=19% Similarity=0.109 Sum_probs=41.8
Q ss_pred CCcEEEECCchHHHH-HHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEEEeCC
Q 018416 39 GGNAVVIGGGYIGME-CAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGT 102 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE-~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v~~~~ 102 (356)
.+++.|||-|-+|+. +|..|.++|.+|+..+.... + ..+.|++.|+++..+.
T Consensus 18 ~~~i~viG~G~sG~s~~A~~l~~~G~~V~~~D~~~~-------~-----~~~~l~~~gi~~~~g~ 70 (475)
T 1p3d_A 18 VQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADG-------V-----VTQRLAQAGAKIYIGH 70 (475)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCS-------H-----HHHHHHHTTCEEEESC
T ss_pred CCEEEEEeecHHHHHHHHHHHHhCCCEEEEECCCCC-------H-----HHHHHHhCCCEEECCC
Confidence 468999999999997 99999999999999987542 1 1235778899887664
No 404
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=89.65 E-value=0.28 Score=47.40 Aligned_cols=36 Identities=31% Similarity=0.280 Sum_probs=32.7
Q ss_pred CCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 37 CSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 37 ~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
..+|+++|+|.|.+|..+|..++..|.+|++.++.+
T Consensus 245 L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp 280 (464)
T 3n58_A 245 MAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDP 280 (464)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred ccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 378999999999999999999999999999987643
No 405
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=89.64 E-value=0.24 Score=45.91 Aligned_cols=33 Identities=24% Similarity=0.145 Sum_probs=30.2
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeC
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPE 71 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~ 71 (356)
..++.|||+|.+|..+|..|++.|.+|+++.+.
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 368999999999999999999999999999764
No 406
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=89.63 E-value=1 Score=40.54 Aligned_cols=57 Identities=19% Similarity=0.370 Sum_probs=41.2
Q ss_pred CCcEEEECC-chHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEEEe
Q 018416 39 GGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVK 100 (356)
Q Consensus 39 ~~~vvVvGg-G~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v~~ 100 (356)
.++++|.|+ |++|-.++..|.+.|.+|+++.|.+.- .+++-.+.+ +.+...|++++.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~----~~~~~~~~~-~~~~~~~~~~~~ 61 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVV----SNIDKVQML-LYFKQLGAKLIE 61 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCS----SCHHHHHHH-HHHHTTTCEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcc----cchhHHHHH-HHHHhCCeEEEe
Confidence 468999995 999999999999999999999887531 123333333 234566777653
No 407
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=89.60 E-value=1.5 Score=39.07 Aligned_cols=60 Identities=15% Similarity=0.134 Sum_probs=42.2
Q ss_pred CCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCCccCC---ccCCHHHHHHHHHHHHhCCCE
Q 018416 38 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCMA---RLFTPKIASYYEEYYKSKGVK 97 (356)
Q Consensus 38 ~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~---~~~d~~~~~~~~~~l~~~GV~ 97 (356)
.+|+++|.| +|.+|.++|..|++.|.+|.++.|.+.... ...+.+-.+...+.+++.|.+
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRR 72 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCe
Confidence 578899998 578999999999999999999988643211 012344445555566665543
No 408
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=89.59 E-value=0.65 Score=42.81 Aligned_cols=47 Identities=11% Similarity=0.258 Sum_probs=38.1
Q ss_pred HHHHHHHHHhc----CCCCcEEEECCchHHHHHHHHHHHCCC-cEEEEeeCC
Q 018416 26 DANRLVNVMKS----CSGGNAVVIGGGYIGMECAASLVINKI-NVTMVFPEA 72 (356)
Q Consensus 26 da~~i~~~l~~----~~~~~vvVvGgG~iGlE~A~~L~~~G~-~Vtlv~~~~ 72 (356)
|..-+...++. ..+++++|+|+|-+|--+|..|++.|. +|+++.|.+
T Consensus 137 D~~Gf~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 137 DGTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp HHHHHHHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CHHHHHHHHHHcCCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 55555555543 257899999999999999999999998 899998864
No 409
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=89.54 E-value=1.1 Score=40.27 Aligned_cols=52 Identities=21% Similarity=0.394 Sum_probs=38.5
Q ss_pred CCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCE
Q 018416 38 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVK 97 (356)
Q Consensus 38 ~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~ 97 (356)
.+|+++|.| +|.+|.++|..|++.|.+|.++.+.+. ...+.+.+.+++.|.+
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~--------~~~~~~~~~~~~~~~~ 98 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEE--------GDANETKQYVEKEGVK 98 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH--------HHHHHHHHHHHTTTCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--------HHHHHHHHHHHhcCCc
Confidence 568889988 589999999999999999999887542 2334445555655543
No 410
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=89.52 E-value=0.88 Score=39.59 Aligned_cols=50 Identities=28% Similarity=0.287 Sum_probs=37.7
Q ss_pred CCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCC
Q 018416 38 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGV 96 (356)
Q Consensus 38 ~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV 96 (356)
.+|+++|.| +|.+|.++|..|++.|.+|.++.|.+ +-.+.+.+.+++.+.
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~---------~~~~~~~~~~~~~~~ 54 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQ---------ASAEKFENSMKEKGF 54 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSH---------HHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH---------HHHHHHHHHHHhcCC
Confidence 467888887 58999999999999999999987643 233445556666554
No 411
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=89.49 E-value=0.36 Score=44.17 Aligned_cols=35 Identities=17% Similarity=0.223 Sum_probs=31.6
Q ss_pred CCCcEEEECC-chHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 38 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 38 ~~~~vvVvGg-G~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
.+++++|.|+ |++|..++..|.+.|.+|+++.|.+
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 5678999996 9999999999999999999998854
No 412
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=89.49 E-value=0.36 Score=46.29 Aligned_cols=35 Identities=20% Similarity=0.303 Sum_probs=32.1
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
++++|.|+|+|.+|.+++..+.++|++|.++++.+
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~ 68 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDP 68 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 67899999999999999999999999999997653
No 413
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=89.48 E-value=0.41 Score=44.44 Aligned_cols=35 Identities=20% Similarity=0.132 Sum_probs=32.2
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
.++++.|||.|.+|..+|..|+..|.+|+++++.+
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 56899999999999999999999999999998764
No 414
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=89.45 E-value=0.33 Score=44.46 Aligned_cols=35 Identities=20% Similarity=0.168 Sum_probs=31.9
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
-.+|.|||.|.+|.-+|..|++.|++|+++++.+.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999988654
No 415
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=89.44 E-value=0.38 Score=43.82 Aligned_cols=35 Identities=20% Similarity=0.316 Sum_probs=31.3
Q ss_pred CCCcEEEECC-chHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 38 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 38 ~~~~vvVvGg-G~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
.+++++|.|+ |++|..++..|.+.|.+|+++.|.+
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~ 45 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSA 45 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4688999997 9999999999999999999988753
No 416
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=89.40 E-value=0.36 Score=47.02 Aligned_cols=34 Identities=24% Similarity=0.388 Sum_probs=30.8
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
.-+++|+|+|-+|..+|..|...|++|+++++.+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4589999999999999999999999999998643
No 417
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=89.40 E-value=0.45 Score=41.29 Aligned_cols=34 Identities=29% Similarity=0.291 Sum_probs=30.6
Q ss_pred CCCcEEEECC-chHHHHHHHHHHHCCCcEEEEeeC
Q 018416 38 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPE 71 (356)
Q Consensus 38 ~~~~vvVvGg-G~iGlE~A~~L~~~G~~Vtlv~~~ 71 (356)
.+++++|.|+ |.+|.++|..|.+.|.+|.++.|.
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5788999985 899999999999999999998775
No 418
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=89.37 E-value=0.91 Score=40.11 Aligned_cols=35 Identities=17% Similarity=0.214 Sum_probs=31.2
Q ss_pred CCCcEEEECC---chHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 38 SGGNAVVIGG---GYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 38 ~~~~vvVvGg---G~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
.+|+++|.|+ |.+|.++|..|++.|.+|+++.|.+
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 45 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND 45 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH
Confidence 5688999997 6999999999999999999998765
No 419
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.33 E-value=0.31 Score=46.79 Aligned_cols=75 Identities=15% Similarity=0.211 Sum_probs=50.5
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEE
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAV 118 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v 118 (356)
..+|+|+|.|.+|..+|..|.+.|.+|+++++.+ +.. +.+++.|++++.+.... . ..+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~---------~~v----~~~~~~g~~vi~GDat~-------~--~~L 61 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP---------DHI----ETLRKFGMKVFYGDATR-------M--DLL 61 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH---------HHH----HHHHHTTCCCEESCTTC-------H--HHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH---------HHH----HHHHhCCCeEEEcCCCC-------H--HHH
Confidence 4689999999999999999999999999998653 332 23456677766553210 0 000
Q ss_pred EeCCCcEEecCeEEEecCC
Q 018416 119 NLRDGNRLPTDMVVVGIGI 137 (356)
Q Consensus 119 ~~~~g~~i~~D~vi~a~G~ 137 (356)
. .-| .-.+|.||++++.
T Consensus 62 ~-~ag-i~~A~~viv~~~~ 78 (413)
T 3l9w_A 62 E-SAG-AAKAEVLINAIDD 78 (413)
T ss_dssp H-HTT-TTTCSEEEECCSS
T ss_pred H-hcC-CCccCEEEECCCC
Confidence 0 011 1258999999874
No 420
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=89.32 E-value=0.53 Score=41.42 Aligned_cols=37 Identities=16% Similarity=0.254 Sum_probs=31.7
Q ss_pred CCCcEEEECC-----------------chHHHHHHHHHHHCCCcEEEEeeCCcc
Q 018416 38 SGGNAVVIGG-----------------GYIGMECAASLVINKINVTMVFPEAHC 74 (356)
Q Consensus 38 ~~~~vvVvGg-----------------G~iGlE~A~~L~~~G~~Vtlv~~~~~~ 74 (356)
.+++|+|-|| |.+|..+|..+.++|.+|+++.+...+
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~ 55 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL 55 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 4788888887 589999999999999999999987553
No 421
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=89.32 E-value=0.29 Score=48.03 Aligned_cols=36 Identities=19% Similarity=0.345 Sum_probs=32.5
Q ss_pred CCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 37 CSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 37 ~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
..+++|+|+|.|.+|..+|..++..|.+|+++++.+
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 368999999999999999999999999999887653
No 422
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=89.31 E-value=0.23 Score=48.34 Aligned_cols=35 Identities=26% Similarity=0.237 Sum_probs=31.7
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
-++|.|||+|.+|.-+|..|++.|++|+++++.+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~ 71 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 71 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 36799999999999999999999999999987654
No 423
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=89.23 E-value=0.42 Score=46.87 Aligned_cols=53 Identities=13% Similarity=0.056 Sum_probs=39.9
Q ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEcCCCcEEEEEeCCCcEEecCeEEEecCCC
Q 018416 84 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIR 138 (356)
Q Consensus 84 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~ 138 (356)
...++...++.|+++++++.|++|+.+ ++.+ .|.+.+|+++++|.||++++..
T Consensus 215 ~~l~~~l~~~lg~~i~~~~~V~~i~~~-~~~v-~v~~~~g~~~~ad~VI~a~p~~ 267 (520)
T 1s3e_A 215 GQVSERIMDLLGDRVKLERPVIYIDQT-RENV-LVETLNHEMYEAKYVISAIPPT 267 (520)
T ss_dssp HHHHHHHHHHHGGGEESSCCEEEEECS-SSSE-EEEETTSCEEEESEEEECSCGG
T ss_pred HHHHHHHHHHcCCcEEcCCeeEEEEEC-CCeE-EEEECCCeEEEeCEEEECCCHH
Confidence 333444444458899999999999864 4444 4788899999999999999853
No 424
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=89.23 E-value=1.1 Score=39.53 Aligned_cols=50 Identities=12% Similarity=0.117 Sum_probs=37.5
Q ss_pred CCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCC
Q 018416 38 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGV 96 (356)
Q Consensus 38 ~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV 96 (356)
.+|.++|.| +|.+|.++|..|++.|.+|.++.|.. +-.+.+.+.+++.|.
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~ 60 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTV---------ERLEDVAKQVTDTGR 60 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCH---------HHHHHHHHHHHHTTC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCH---------HHHHHHHHHHHhcCC
Confidence 578899988 47899999999999999999987642 333444555666554
No 425
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=89.20 E-value=0.34 Score=43.83 Aligned_cols=34 Identities=15% Similarity=0.147 Sum_probs=28.9
Q ss_pred CCcEEEECC-chHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 39 GGNAVVIGG-GYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 39 ~~~vvVvGg-G~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
+++++|.|+ |++|..++..|.+.|.+|+++.|.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRR 36 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCC
Confidence 478999996 9999999999999999999998753
No 426
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=89.18 E-value=0.42 Score=45.01 Aligned_cols=36 Identities=28% Similarity=0.352 Sum_probs=32.8
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
+++++.|+|+|.+|..++..+.++|++|.++++.+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 578999999999999999999999999999987643
No 427
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=89.17 E-value=0.15 Score=50.85 Aligned_cols=43 Identities=23% Similarity=0.237 Sum_probs=35.0
Q ss_pred EEEeccccc-CCCCEEEEccccccCccccCcccccccHHHHHHHHHHHHHHHcC
Q 018416 155 IKVTGRLQS-SNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 207 (356)
Q Consensus 155 I~vd~~l~t-s~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 207 (356)
|..|+.++| +.+++|+|||++.... .+..|..+|..+|+.|+.
T Consensus 497 i~~~~~~~~~~~~gly~~GegaG~a~----------gi~~Aa~~G~~~a~~i~~ 540 (549)
T 3nlc_A 497 IKRGKDFQSVNLKGFYPAGEGAGYAG----------GILSAGIDGIKVAEAVAR 540 (549)
T ss_dssp CCCTTTTSCTTCBTEEECHHHHTSCC----------SHHHHHHHHHHHHHHHHH
T ss_pred EEECCCceECCcCCEEEccccCChhh----------HHHHHHHHHHHHHHHHHH
Confidence 678899999 8999999999998753 355677788888887753
No 428
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=89.16 E-value=0.61 Score=42.27 Aligned_cols=46 Identities=20% Similarity=0.276 Sum_probs=36.8
Q ss_pred HHHHHHHHHh----cCCCCcEEEECCchHHHHHHHHHHHCCC-cEEEEeeC
Q 018416 26 DANRLVNVMK----SCSGGNAVVIGGGYIGMECAASLVINKI-NVTMVFPE 71 (356)
Q Consensus 26 da~~i~~~l~----~~~~~~vvVvGgG~iGlE~A~~L~~~G~-~Vtlv~~~ 71 (356)
|..-+...++ ...+++++|+|+|-+|-.++..|.+.|. +|+++.|.
T Consensus 110 D~~G~~~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 110 DVSGFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp HHHHHHHHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CHHHHHHHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 5555555553 2367899999999999999999999998 69998765
No 429
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=89.11 E-value=0.44 Score=42.16 Aligned_cols=35 Identities=26% Similarity=0.288 Sum_probs=30.7
Q ss_pred CCCcEEEECC-ch--HHHHHHHHHHHCCCcEEEEeeCC
Q 018416 38 SGGNAVVIGG-GY--IGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 38 ~~~~vvVvGg-G~--iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
.+|+++|.|+ |. +|.++|..|++.|.+|.++.|.+
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 43 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE 43 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch
Confidence 5788999996 67 99999999999999999987753
No 430
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=89.04 E-value=0.5 Score=41.42 Aligned_cols=35 Identities=29% Similarity=0.330 Sum_probs=31.4
Q ss_pred CCCcEEEECC-----------------chHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 38 SGGNAVVIGG-----------------GYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 38 ~~~~vvVvGg-----------------G~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
.+++++|-|| |-+|..+|..|+++|.+|+++.+..
T Consensus 7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPV 58 (226)
T ss_dssp TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSC
T ss_pred CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCc
Confidence 5789999998 7899999999999999999997654
No 431
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=89.01 E-value=0.71 Score=41.16 Aligned_cols=39 Identities=23% Similarity=0.244 Sum_probs=33.5
Q ss_pred CCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCCccCC
Q 018416 38 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCMA 76 (356)
Q Consensus 38 ~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~ 76 (356)
.+|.++|.| ++.+|.++|..|++.|.+|.++.|...-..
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~ 44 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANP 44 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCT
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhh
Confidence 578889988 578999999999999999999998865443
No 432
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=89.00 E-value=0.86 Score=40.10 Aligned_cols=36 Identities=28% Similarity=0.389 Sum_probs=31.2
Q ss_pred CCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 38 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 38 ~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
.+|.++|.| +|.+|.++|..|++.|.+|.++.|.+.
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~ 42 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGE 42 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 578888888 578999999999999999999988643
No 433
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=88.98 E-value=0.47 Score=43.00 Aligned_cols=35 Identities=29% Similarity=0.372 Sum_probs=31.1
Q ss_pred CCCCcEEEECCc-hHHHHHHHHHHHCCCcEEEEeeC
Q 018416 37 CSGGNAVVIGGG-YIGMECAASLVINKINVTMVFPE 71 (356)
Q Consensus 37 ~~~~~vvVvGgG-~iGlE~A~~L~~~G~~Vtlv~~~ 71 (356)
..+++++|||.| .+|.-+|..|.+.|..||++++.
T Consensus 159 l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~ 194 (286)
T 4a5o_A 159 LYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRF 194 (286)
T ss_dssp CTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence 378999999955 58999999999999999999764
No 434
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=88.95 E-value=0.32 Score=43.06 Aligned_cols=35 Identities=20% Similarity=0.252 Sum_probs=31.0
Q ss_pred CCCcEEEECC-ch-HHHHHHHHHHHCCCcEEEEeeCC
Q 018416 38 SGGNAVVIGG-GY-IGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 38 ~~~~vvVvGg-G~-iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
.+|+++|.|+ |. +|.++|..|++.|.+|.++.|..
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 5789999998 74 99999999999999999987753
No 435
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=88.93 E-value=0.48 Score=41.18 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=30.5
Q ss_pred CCCcEEEECC-chHHHHHHHHHHHCCCcEEEEeeC
Q 018416 38 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPE 71 (356)
Q Consensus 38 ~~~~vvVvGg-G~iGlE~A~~L~~~G~~Vtlv~~~ 71 (356)
++++++|.|+ |.+|.++|..|.+.|.+|.++.|.
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRT 40 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5788999986 899999999999999999998765
No 436
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=88.91 E-value=0.26 Score=44.51 Aligned_cols=34 Identities=26% Similarity=0.226 Sum_probs=31.2
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
++|.|||.|.+|.-+|..|.+.|++|++++|.+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4799999999999999999999999999988754
No 437
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=88.88 E-value=0.29 Score=43.77 Aligned_cols=34 Identities=18% Similarity=0.200 Sum_probs=30.3
Q ss_pred CCCcEEEECC-chHHHHHHHHHHHCCCcEEEEeeC
Q 018416 38 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPE 71 (356)
Q Consensus 38 ~~~~vvVvGg-G~iGlE~A~~L~~~G~~Vtlv~~~ 71 (356)
++++++|.|| |++|..++..|.+.|.+|+.+.|.
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 45 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ 45 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc
Confidence 5788999985 999999999999999999999875
No 438
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=88.88 E-value=0.76 Score=41.61 Aligned_cols=46 Identities=20% Similarity=0.265 Sum_probs=36.5
Q ss_pred HHHHHHHHHhc----CCCCcEEEECCchHHHHHHHHHHHCCC-cEEEEeeC
Q 018416 26 DANRLVNVMKS----CSGGNAVVIGGGYIGMECAASLVINKI-NVTMVFPE 71 (356)
Q Consensus 26 da~~i~~~l~~----~~~~~vvVvGgG~iGlE~A~~L~~~G~-~Vtlv~~~ 71 (356)
|..-+...++. ..+++++|+|+|-+|--++..|.+.|. +|+++.|.
T Consensus 109 D~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 109 DGEGLVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred HHHHHHHHHHHhCCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 45555554442 257899999999999999999999996 89999774
No 439
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=88.87 E-value=0.47 Score=43.34 Aligned_cols=50 Identities=26% Similarity=0.314 Sum_probs=37.0
Q ss_pred CHHHHHHHHHHH-hcCCCCcEEEECCc-hHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 23 DLADANRLVNVM-KSCSGGNAVVIGGG-YIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 23 ~~~da~~i~~~l-~~~~~~~vvVvGgG-~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
|..-+.++.+.. ....+++++|||.| .+|.-+|..|.+.|..||++++..
T Consensus 148 Tp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T 199 (300)
T 4a26_A 148 TAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT 199 (300)
T ss_dssp HHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS
T ss_pred CHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence 334444444332 23478999999965 589999999999999999998743
No 440
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=88.85 E-value=0.31 Score=44.33 Aligned_cols=35 Identities=20% Similarity=0.022 Sum_probs=32.1
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
.+++.|||.|.+|.-+|..|++.|++|+++++.+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 36899999999999999999999999999988764
No 441
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=88.85 E-value=1.4 Score=39.17 Aligned_cols=52 Identities=23% Similarity=0.286 Sum_probs=38.8
Q ss_pred CCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCE
Q 018416 38 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVK 97 (356)
Q Consensus 38 ~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~ 97 (356)
.+|.++|.| +|.+|.++|..|++.|.+|.++.+.+ .+-.+.+.+.+++.|.+
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~--------~~~~~~~~~~l~~~~~~ 82 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNA--------AERAQAVVSEIEQAGGR 82 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC--------HHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC--------HHHHHHHHHHHHhcCCc
Confidence 578899998 57899999999999999999886543 23344455566665543
No 442
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=88.84 E-value=0.27 Score=48.08 Aligned_cols=34 Identities=24% Similarity=0.258 Sum_probs=31.2
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
..+|.|||.|++|+-+|..|++.|.+|+++++.+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999998753
No 443
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=88.80 E-value=0.31 Score=41.58 Aligned_cols=32 Identities=16% Similarity=0.197 Sum_probs=29.3
Q ss_pred cEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 41 NAVVIG-GGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 41 ~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
++.|+| +|.+|..+|..|.+.|.+|+++.|.+
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 689999 99999999999999999999998753
No 444
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=88.78 E-value=0.43 Score=43.02 Aligned_cols=34 Identities=32% Similarity=0.364 Sum_probs=30.6
Q ss_pred CcEEEECC-chHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 40 GNAVVIGG-GYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 40 ~~vvVvGg-G~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
++|+|.|+ |++|-.++..|.+.|.+|+++.|.+.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 35 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSS 35 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 46899997 99999999999999999999988654
No 445
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=88.76 E-value=0.56 Score=42.41 Aligned_cols=45 Identities=18% Similarity=0.192 Sum_probs=36.0
Q ss_pred HHHHHHHHHh----cCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeC
Q 018416 26 DANRLVNVMK----SCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPE 71 (356)
Q Consensus 26 da~~i~~~l~----~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~ 71 (356)
|...+...++ ...+++++|+|+|-+|..+|..|.+.| +|+++.|.
T Consensus 111 d~~G~~~~L~~~~~~l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 111 DGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp HHHHHHHHHHHHHCCCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CHHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 5555555543 235789999999999999999999999 99998765
No 446
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=88.76 E-value=0.48 Score=42.99 Aligned_cols=36 Identities=28% Similarity=0.331 Sum_probs=31.9
Q ss_pred CCCCcEEEECCch-HHHHHHHHHHHCCCcEEEEeeCC
Q 018416 37 CSGGNAVVIGGGY-IGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 37 ~~~~~vvVvGgG~-iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
..+++++|||.|. +|.-+|..|.+.|..||++++..
T Consensus 157 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t 193 (288)
T 1b0a_A 157 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT 193 (288)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 4789999999995 69999999999999999997543
No 447
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=88.74 E-value=1.3 Score=40.17 Aligned_cols=50 Identities=18% Similarity=0.216 Sum_probs=37.7
Q ss_pred CCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCC
Q 018416 38 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGV 96 (356)
Q Consensus 38 ~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV 96 (356)
.+|.++|.| +|.+|.++|..|++.|.+|.++.|.+ +-.+.+.+.+++.+.
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~---------~~~~~~~~~l~~~~~ 80 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQ---------PALEQAVNGLRGQGF 80 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH---------HHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH---------HHHHHHHHHHHhcCC
Confidence 578899998 57899999999999999999987643 223344555665554
No 448
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=88.71 E-value=0.43 Score=43.64 Aligned_cols=35 Identities=20% Similarity=0.207 Sum_probs=30.8
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCC--cEEEEeeCC
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKI--NVTMVFPEA 72 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~--~Vtlv~~~~ 72 (356)
+..+++|||+|.+|.-+|..|++.|. +|+++++.+
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 34689999999999999999999998 999998753
No 449
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=88.70 E-value=0.3 Score=47.39 Aligned_cols=33 Identities=24% Similarity=0.358 Sum_probs=30.6
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
.+|.|||.|++|.-+|..|++.|.+|+++++.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 479999999999999999999999999998764
No 450
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=88.68 E-value=0.52 Score=46.07 Aligned_cols=36 Identities=19% Similarity=0.211 Sum_probs=33.3
Q ss_pred CCCcEEEECCchHHHHHHHHHHHC-CC-cEEEEeeCCc
Q 018416 38 SGGNAVVIGGGYIGMECAASLVIN-KI-NVTMVFPEAH 73 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~-G~-~Vtlv~~~~~ 73 (356)
+-.+|.|||.|+.|.-+|..|++. |+ +|+++++.+.
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 457899999999999999999999 99 9999998876
No 451
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=88.68 E-value=0.36 Score=46.50 Aligned_cols=35 Identities=31% Similarity=0.365 Sum_probs=32.3
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
.+++++|+|.|.+|..+|..|...|.+|+++++.+
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p 244 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDP 244 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCh
Confidence 68999999999999999999999999999988753
No 452
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=88.67 E-value=0.31 Score=47.45 Aligned_cols=35 Identities=23% Similarity=0.401 Sum_probs=32.3
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
-++|.|||+|..|.-+|..|++.|.+|+++++.+.
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 37899999999999999999999999999988765
No 453
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=88.67 E-value=0.47 Score=43.98 Aligned_cols=35 Identities=20% Similarity=0.151 Sum_probs=32.2
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
.++++.|||.|.+|..+|..|...|.+|+++++.+
T Consensus 154 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 154 TQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 56789999999999999999999999999998764
No 454
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=88.64 E-value=0.53 Score=46.83 Aligned_cols=60 Identities=15% Similarity=0.163 Sum_probs=35.5
Q ss_pred eEEeCCHHHHHHHHHHHhcC-CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccCCc
Q 018416 18 VCYLRDLADANRLVNVMKSC-SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR 77 (356)
Q Consensus 18 v~~l~~~~da~~i~~~l~~~-~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~ 77 (356)
++.+.+.++..++.+.+... +.++++|+|+|..|..+|..|.+.|.+|++++..+.....
T Consensus 326 L~v~g~~~~l~~~~~~~~~~~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~ 386 (565)
T 4gx0_A 326 LVLAGTKSQLAALEYLIGEAPEDELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCN 386 (565)
T ss_dssp ---------------------CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCC
T ss_pred EEEEeCHHHHHHHHHHhcCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhh
Confidence 34444455555555544321 2389999999999999999999999999999998875543
No 455
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=88.59 E-value=0.51 Score=43.85 Aligned_cols=36 Identities=22% Similarity=0.254 Sum_probs=32.8
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
.++++.|||.|.+|-.+|..|...|.+|+++++.+.
T Consensus 163 ~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~ 198 (333)
T 3ba1_A 163 SGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKK 198 (333)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCch
Confidence 578999999999999999999999999999987654
No 456
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=88.57 E-value=0.98 Score=41.09 Aligned_cols=33 Identities=18% Similarity=0.188 Sum_probs=28.1
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
++|-+||-|..|.-+|..|.+.|++|++++|.+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~ 38 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTA 38 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC----
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 689999999999999999999999999998764
No 457
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=88.56 E-value=0.35 Score=44.04 Aligned_cols=34 Identities=18% Similarity=0.108 Sum_probs=30.8
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
.++|.|||.|.+|.-+|..|.+.|.+|+++++.+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999997653
No 458
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=88.55 E-value=0.19 Score=43.80 Aligned_cols=33 Identities=18% Similarity=0.246 Sum_probs=29.5
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
.++++|+|+|.+|..+|..|.+.|. |+++++.+
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 4789999999999999999999999 99998754
No 459
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=88.55 E-value=0.57 Score=44.49 Aligned_cols=38 Identities=13% Similarity=-0.004 Sum_probs=34.7
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCccC
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM 75 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~~l 75 (356)
++.+++|+|+|.++..+|..++..|++||+++.++.+.
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~~ 240 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFA 240 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTTS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhc
Confidence 45689999999999999999999999999999987754
No 460
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=88.53 E-value=0.54 Score=43.12 Aligned_cols=35 Identities=26% Similarity=0.286 Sum_probs=32.2
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
.++++.|||.|.+|-.+|..|...|.+|+.+++.+
T Consensus 141 ~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~ 175 (307)
T 1wwk_A 141 EGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYP 175 (307)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 57899999999999999999999999999988754
No 461
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=88.49 E-value=1.4 Score=39.08 Aligned_cols=34 Identities=21% Similarity=0.176 Sum_probs=30.4
Q ss_pred CCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeC
Q 018416 38 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPE 71 (356)
Q Consensus 38 ~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~ 71 (356)
.+|+++|.| +|.+|.++|..|.+.|.+|+++.|.
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~ 64 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDIN 64 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcC
Confidence 568899998 6899999999999999999998775
No 462
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=88.39 E-value=1.2 Score=40.11 Aligned_cols=53 Identities=21% Similarity=0.213 Sum_probs=39.1
Q ss_pred CCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCE
Q 018416 38 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVK 97 (356)
Q Consensus 38 ~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~ 97 (356)
.+|+++|.| +|.||.++|..|++.|.+|.++.+.. +.+-.+.+.+.+++.|.+
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~-------~~~~~~~~~~~~~~~~~~ 101 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPA-------EEEDAQQVKALIEECGRK 101 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGG-------GHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc-------chhHHHHHHHHHHHcCCc
Confidence 578899998 57999999999999999999887642 233344555566665543
No 463
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=88.38 E-value=0.56 Score=43.13 Aligned_cols=35 Identities=17% Similarity=0.101 Sum_probs=32.2
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
.++++.|||.|.+|-.+|..|...|.+|+.+++.+
T Consensus 141 ~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~ 175 (313)
T 2ekl_A 141 AGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILD 175 (313)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCc
Confidence 67899999999999999999999999999988754
No 464
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=88.37 E-value=0.42 Score=43.23 Aligned_cols=48 Identities=19% Similarity=0.144 Sum_probs=37.7
Q ss_pred HHHHHHHHHhc----CCCCcEEEECCchHHHHHHHHHHHCCC-cEEEEeeCCc
Q 018416 26 DANRLVNVMKS----CSGGNAVVIGGGYIGMECAASLVINKI-NVTMVFPEAH 73 (356)
Q Consensus 26 da~~i~~~l~~----~~~~~vvVvGgG~iGlE~A~~L~~~G~-~Vtlv~~~~~ 73 (356)
|..-+...++. ..+++++|+|+|-+|--++..|.+.|. +|+++.|.+.
T Consensus 100 D~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 100 DGIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp HHHHHHHHHHHHSTTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred hHHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 44444444432 257899999999999999999999998 8999988754
No 465
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=88.36 E-value=0.47 Score=44.08 Aligned_cols=36 Identities=19% Similarity=0.189 Sum_probs=32.8
Q ss_pred CCCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 37 CSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 37 ~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
..++++.|||.|.+|..+|..|...|.+|+++++.+
T Consensus 144 l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~ 179 (333)
T 2d0i_A 144 LYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHR 179 (333)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCc
Confidence 467899999999999999999999999999988764
No 466
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=88.35 E-value=0.57 Score=43.25 Aligned_cols=50 Identities=18% Similarity=0.140 Sum_probs=39.0
Q ss_pred CCHHHHHHHHHHH---------h-cCCCCcEEEECCch-HHHHHHHHHHHCCCcEEEEeeC
Q 018416 22 RDLADANRLVNVM---------K-SCSGGNAVVIGGGY-IGMECAASLVINKINVTMVFPE 71 (356)
Q Consensus 22 ~~~~da~~i~~~l---------~-~~~~~~vvVvGgG~-iGlE~A~~L~~~G~~Vtlv~~~ 71 (356)
.+..-+.++.+.+ . ...+++++|||+|. +|--+|..|...|.+||++.|.
T Consensus 150 cTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 150 CTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp HHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 3455555655552 2 34789999999995 5999999999999999999775
No 467
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=88.34 E-value=0.45 Score=42.62 Aligned_cols=36 Identities=11% Similarity=0.194 Sum_probs=31.1
Q ss_pred CCCCcEEEECC-ch--HHHHHHHHHHHCCCcEEEEeeCC
Q 018416 37 CSGGNAVVIGG-GY--IGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 37 ~~~~~vvVvGg-G~--iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
..+|.++|.|+ |. +|.++|..|++.|.+|.++.+..
T Consensus 24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch
Confidence 35788888885 56 99999999999999999998865
No 468
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=88.33 E-value=1.5 Score=39.17 Aligned_cols=51 Identities=16% Similarity=0.113 Sum_probs=37.8
Q ss_pred CCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCC
Q 018416 38 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGV 96 (356)
Q Consensus 38 ~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV 96 (356)
.+|.++|.| +|.||.++|..|++.|.+|.++.+++ ++-.+.+.+.+++.|.
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~--------~~~~~~~~~~~~~~~~ 79 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGD--------AEGVAPVIAELSGLGA 79 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCC--------HHHHHHHHHHHHHTTC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCC--------HHHHHHHHHHHHhcCC
Confidence 567888888 57999999999999999999987642 3334445555666553
No 469
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=88.28 E-value=0.44 Score=44.16 Aligned_cols=36 Identities=22% Similarity=0.236 Sum_probs=33.3
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
.++++.|||-|.+|-.+|..|...|.+|+.+.+.+.
T Consensus 139 ~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~ 174 (324)
T 3hg7_A 139 KGRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGR 174 (324)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred ccceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChH
Confidence 578999999999999999999999999999988764
No 470
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=88.25 E-value=0.47 Score=43.28 Aligned_cols=34 Identities=24% Similarity=0.213 Sum_probs=31.3
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCC-cEEEEeeC
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKI-NVTMVFPE 71 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~-~Vtlv~~~ 71 (356)
.+++++|+|+|.+|-.+|..|.+.|. +|+++.|.
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 57899999999999999999999998 89999775
No 471
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=88.25 E-value=0.47 Score=43.16 Aligned_cols=33 Identities=21% Similarity=0.241 Sum_probs=30.6
Q ss_pred CcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 40 GNAVVIG-GGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 40 ~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
++|.||| .|.+|..+|..|++.|.+|+++.+.+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 5899999 99999999999999999999998764
No 472
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=88.24 E-value=1.2 Score=39.36 Aligned_cols=37 Identities=14% Similarity=0.029 Sum_probs=32.1
Q ss_pred CCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCCcc
Q 018416 38 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHC 74 (356)
Q Consensus 38 ~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~~~ 74 (356)
.+|+++|.| +|.+|.++|..|++.|.+|.++.|....
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~ 64 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKP 64 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 577888887 5899999999999999999999887543
No 473
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=88.23 E-value=1.4 Score=40.12 Aligned_cols=61 Identities=13% Similarity=0.054 Sum_probs=41.4
Q ss_pred CCCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCCccCCc---cCCHHHHHHHHHHHHhCCCE
Q 018416 37 CSGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCMAR---LFTPKIASYYEEYYKSKGVK 97 (356)
Q Consensus 37 ~~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~---~~d~~~~~~~~~~l~~~GV~ 97 (356)
..+|.++|.| +|.||.++|..|++.|.+|.++.+....... .-+++-.+...+.+++.|.+
T Consensus 44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (317)
T 3oec_A 44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRR 108 (317)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCe
Confidence 3567788887 5799999999999999999999776332110 01344445555666666543
No 474
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=88.21 E-value=0.76 Score=41.63 Aligned_cols=47 Identities=17% Similarity=0.136 Sum_probs=38.0
Q ss_pred HHHHHHHHHhc----CCCCcEEEECCchHHHHHHHHHHHCCC-cEEEEeeCC
Q 018416 26 DANRLVNVMKS----CSGGNAVVIGGGYIGMECAASLVINKI-NVTMVFPEA 72 (356)
Q Consensus 26 da~~i~~~l~~----~~~~~vvVvGgG~iGlE~A~~L~~~G~-~Vtlv~~~~ 72 (356)
|..-+...++. ..+++++|+|+|-+|--++..|.+.|. +|+++.|..
T Consensus 105 D~~G~~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 105 DYIGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp HHHHHHHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred cHHHHHHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 55566555543 257899999999999999999999998 899998753
No 475
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=88.21 E-value=0.42 Score=47.96 Aligned_cols=35 Identities=29% Similarity=0.356 Sum_probs=31.7
Q ss_pred CcEEEECCchHHHHHHHHHHH-CCCcEEEEeeCCcc
Q 018416 40 GNAVVIGGGYIGMECAASLVI-NKINVTMVFPEAHC 74 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~-~G~~Vtlv~~~~~~ 74 (356)
-.++|||+|..|+-+|..|++ .|.+|.++|+++..
T Consensus 25 ~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 25 YDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 369999999999999999999 79999999998653
No 476
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=88.18 E-value=0.3 Score=43.58 Aligned_cols=31 Identities=13% Similarity=0.260 Sum_probs=28.9
Q ss_pred cEEEECC-chHHHHHHHHHHHCCCcEEEEeeC
Q 018416 41 NAVVIGG-GYIGMECAASLVINKINVTMVFPE 71 (356)
Q Consensus 41 ~vvVvGg-G~iGlE~A~~L~~~G~~Vtlv~~~ 71 (356)
+++|.|+ |++|..++..|.+.|.+|+.+.|.
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK 38 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc
Confidence 8999995 999999999999999999999884
No 477
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=88.18 E-value=0.31 Score=44.81 Aligned_cols=34 Identities=15% Similarity=0.204 Sum_probs=30.9
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
.++|.|||.|.+|.-+|..|.+.|.+|+++++.+
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4589999999999999999999999999997653
No 478
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=88.17 E-value=0.32 Score=49.34 Aligned_cols=56 Identities=16% Similarity=0.147 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHhC-CC-EEEeCCeeeEEEEcCC--CcEEEEEe---CCCc--EEecCeEEEecCC
Q 018416 82 KIASYYEEYYKSK-GV-KFVKGTVLSSFDVDSN--GKVVAVNL---RDGN--RLPTDMVVVGIGI 137 (356)
Q Consensus 82 ~~~~~~~~~l~~~-GV-~v~~~~~v~~i~~~~~--g~v~~v~~---~~g~--~i~~D~vi~a~G~ 137 (356)
.+...+.+.+++. || +++.++.++++..+++ +++..+.. .+|+ .+.++.||+|+|.
T Consensus 152 ~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG 216 (643)
T 1jnr_A 152 SYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGG 216 (643)
T ss_dssp THHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCc
Confidence 4556667777777 99 9999999999986333 27766543 5665 6899999999983
No 479
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=88.15 E-value=0.95 Score=41.61 Aligned_cols=47 Identities=19% Similarity=0.326 Sum_probs=38.4
Q ss_pred HHHHHHHHHhc----CCCCcEEEECCchHHHHHHHHHHHCCC-cEEEEeeCC
Q 018416 26 DANRLVNVMKS----CSGGNAVVIGGGYIGMECAASLVINKI-NVTMVFPEA 72 (356)
Q Consensus 26 da~~i~~~l~~----~~~~~vvVvGgG~iGlE~A~~L~~~G~-~Vtlv~~~~ 72 (356)
|..-+...+++ ..+++++|+|+|-+|--++..|.+.|. +|+++.|.+
T Consensus 131 D~~Gf~~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~ 182 (312)
T 3t4e_A 131 DGTGHIRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKD 182 (312)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred cHHHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 55666665543 257899999999999999999999998 799998864
No 480
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=88.13 E-value=0.5 Score=42.15 Aligned_cols=35 Identities=14% Similarity=0.238 Sum_probs=31.6
Q ss_pred CCCcEEEECC---chHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 38 SGGNAVVIGG---GYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 38 ~~~~vvVvGg---G~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
.+|+++|.|+ |.+|.++|..|++.|.+|.++.|.+
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~ 42 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE 42 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5788999997 6999999999999999999998865
No 481
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=88.13 E-value=0.38 Score=45.15 Aligned_cols=34 Identities=21% Similarity=0.188 Sum_probs=30.9
Q ss_pred CCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 39 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 39 ~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
..++.|||+|.+|.-+|..|++.|.+|+++.|.+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999998753
No 482
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=88.12 E-value=0.22 Score=49.72 Aligned_cols=53 Identities=15% Similarity=0.177 Sum_probs=37.7
Q ss_pred cCcEEEecccc------cCCCCEEEEccccccCccccCccccc-ccHHHHHHHHHHHHHHHcC
Q 018416 152 KGGIKVTGRLQ------SSNSSVYAVGDVAAFPLKLLGETRRL-EHVDSARKSAKHAVAAIME 207 (356)
Q Consensus 152 ~g~I~vd~~l~------ts~~~VyAiGD~~~~~~~~~g~~~~~-~~~~~A~~~g~~aa~~i~g 207 (356)
.|+|.||+++| +.+|++||+|+++... +|..+.- .....+.-.|++|+++++.
T Consensus 502 ~GGl~vd~~~~vl~~~g~~I~GLyAaGe~~~g~---~g~~~~~g~sl~~~~v~Gr~Ag~~aa~ 561 (566)
T 1qo8_A 502 MGGVAINTTASVLDLQSKPIDGLFAAGEVTGGV---HGYNRLGGNAIADTVVFGRIAGDNAAK 561 (566)
T ss_dssp CCEECBCTTCEEEBTTSCEEEEEEECSTTBCSS---STTCCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred cccEEECCCCeEECCCCCEeCCEEecccccCCC---CCCCCCchhhHHHHHHHHHHHHHHHHH
Confidence 58899999998 6799999999998643 2322211 1235677788988888753
No 483
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=88.12 E-value=0.38 Score=47.84 Aligned_cols=34 Identities=29% Similarity=0.438 Sum_probs=31.1
Q ss_pred CcEEEECCchHHHHHHHHHHHC-CCcEEEEeeCCc
Q 018416 40 GNAVVIGGGYIGMECAASLVIN-KINVTMVFPEAH 73 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~-G~~Vtlv~~~~~ 73 (356)
-.++|||+|..|+-+|..|++. |.+|.++|+++.
T Consensus 14 ~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~ 48 (546)
T 2jbv_A 14 FDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPD 48 (546)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCc
Confidence 3699999999999999999998 899999999854
No 484
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=88.11 E-value=0.54 Score=42.85 Aligned_cols=36 Identities=22% Similarity=0.122 Sum_probs=31.1
Q ss_pred CCCcEEEECC-chHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 38 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 38 ~~~~vvVvGg-G~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
+.++|+|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 49 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRS 49 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 5689999985 99999999999999999999988754
No 485
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=88.08 E-value=0.48 Score=43.25 Aligned_cols=35 Identities=29% Similarity=0.406 Sum_probs=31.2
Q ss_pred CCCCcEEEECCch-HHHHHHHHHHHCCCcEEEEeeC
Q 018416 37 CSGGNAVVIGGGY-IGMECAASLVINKINVTMVFPE 71 (356)
Q Consensus 37 ~~~~~vvVvGgG~-iGlE~A~~L~~~G~~Vtlv~~~ 71 (356)
..+++++|||.|. +|.-+|..|.+.|..||++++.
T Consensus 163 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 163 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 3789999999995 7999999999999999999743
No 486
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=88.04 E-value=1.9 Score=37.91 Aligned_cols=34 Identities=24% Similarity=0.193 Sum_probs=30.2
Q ss_pred CCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeC
Q 018416 38 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPE 71 (356)
Q Consensus 38 ~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~ 71 (356)
.+|+++|.| +|.+|.++|..|++.|.+|.++.|.
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~ 42 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRN 42 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 568889988 5799999999999999999998765
No 487
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=88.03 E-value=1.2 Score=38.81 Aligned_cols=52 Identities=29% Similarity=0.279 Sum_probs=38.2
Q ss_pred CCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCE
Q 018416 38 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVK 97 (356)
Q Consensus 38 ~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~ 97 (356)
.+|+++|.| +|.+|.++|..|++.|.+|.++.+.+ ++-.+.+.+.+++.|.+
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~--------~~~~~~~~~~~~~~~~~ 55 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGS--------KEKAEAVVEEIKAKGVD 55 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC--------HHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCC--------HHHHHHHHHHHHhcCCc
Confidence 357788887 58999999999999999999887643 23344555666666543
No 488
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=88.03 E-value=0.31 Score=44.28 Aligned_cols=33 Identities=18% Similarity=0.145 Sum_probs=30.4
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
++|.|||.|.+|.-+|..|.+.|++|+++++.+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 589999999999999999999999999997653
No 489
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=87.99 E-value=1.7 Score=38.00 Aligned_cols=34 Identities=24% Similarity=0.300 Sum_probs=30.1
Q ss_pred CCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeC
Q 018416 38 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPE 71 (356)
Q Consensus 38 ~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~ 71 (356)
.+|+++|.| +|.+|.++|..|++.|.+|.++.|.
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~ 40 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGAAVAIAARR 40 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 468889988 5799999999999999999998764
No 490
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=87.99 E-value=0.64 Score=40.85 Aligned_cols=36 Identities=19% Similarity=0.180 Sum_probs=31.4
Q ss_pred CCCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCC
Q 018416 37 CSGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEA 72 (356)
Q Consensus 37 ~~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~ 72 (356)
..+|+++|.| +|.+|.++|..|++.|.+|.++.|.+
T Consensus 17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~ 53 (249)
T 1o5i_A 17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE 53 (249)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3678899998 48999999999999999999998753
No 491
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=87.98 E-value=0.61 Score=42.84 Aligned_cols=36 Identities=19% Similarity=0.185 Sum_probs=32.8
Q ss_pred CCCcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 38 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 38 ~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
.++++.|||.|.+|-.+|..|...|.+|+.+.+.+.
T Consensus 143 ~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~ 178 (311)
T 2cuk_A 143 QGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPK 178 (311)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 578899999999999999999999999999987654
No 492
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=87.97 E-value=0.51 Score=40.81 Aligned_cols=37 Identities=14% Similarity=0.230 Sum_probs=32.9
Q ss_pred CCCcEEEEC-CchHHHHHHHHHHHCCC--cEEEEeeCCcc
Q 018416 38 SGGNAVVIG-GGYIGMECAASLVINKI--NVTMVFPEAHC 74 (356)
Q Consensus 38 ~~~~vvVvG-gG~iGlE~A~~L~~~G~--~Vtlv~~~~~~ 74 (356)
.+++++|.| +|.+|..++..|.+.|. +|+++.|.+.-
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~ 56 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLT 56 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCC
Confidence 468999999 59999999999999999 99999987653
No 493
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=87.97 E-value=0.55 Score=44.20 Aligned_cols=35 Identities=17% Similarity=0.096 Sum_probs=31.4
Q ss_pred cCCCCcEEEECCchHHHHHHHHHHHCCCcEEEEee
Q 018416 36 SCSGGNAVVIGGGYIGMECAASLVINKINVTMVFP 70 (356)
Q Consensus 36 ~~~~~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~ 70 (356)
+..+++++|+|.|.+|..+|..|.+.|.+|++.++
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~ 204 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDV 204 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcC
Confidence 35789999999999999999999999999987653
No 494
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=87.97 E-value=0.61 Score=40.63 Aligned_cols=36 Identities=17% Similarity=0.271 Sum_probs=31.8
Q ss_pred CCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 38 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 38 ~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
.+|+++|.| +|.+|.++|..|++.|.+|.++.|.+.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 42 (241)
T 1dhr_A 6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN 42 (241)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChh
Confidence 568899998 589999999999999999999988754
No 495
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=87.93 E-value=0.49 Score=42.36 Aligned_cols=33 Identities=24% Similarity=0.265 Sum_probs=29.4
Q ss_pred cEEEECC-chHHHHHHHHHHHCCCcEEEEeeCCcc
Q 018416 41 NAVVIGG-GYIGMECAASLVINKINVTMVFPEAHC 74 (356)
Q Consensus 41 ~vvVvGg-G~iGlE~A~~L~~~G~~Vtlv~~~~~~ 74 (356)
+++|.|+ |++|-.++..|. .|.+|+.+.|.+..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~ 35 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSKE 35 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCSS
T ss_pred eEEEECCCCHHHHHHHHHhh-cCCeEEEecccccc
Confidence 6899996 999999999999 89999999987643
No 496
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=87.87 E-value=1.1 Score=39.37 Aligned_cols=50 Identities=18% Similarity=0.145 Sum_probs=37.3
Q ss_pred CCCcEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCC
Q 018416 38 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGV 96 (356)
Q Consensus 38 ~~~~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV 96 (356)
.+|.++|.| +|.+|.++|..|++.|.+|.++.|.+ +-.+.+.+.+++.|.
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~ 61 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKS---------EGAEAVAAAIRQAGG 61 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSH---------HHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH---------HHHHHHHHHHHhcCC
Confidence 577888887 58999999999999999999987643 233444555665553
No 497
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=87.85 E-value=0.5 Score=43.13 Aligned_cols=34 Identities=21% Similarity=0.174 Sum_probs=31.1
Q ss_pred CcEEEECCchHHHHHHHHHHHCCCcEEEEeeCCc
Q 018416 40 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 73 (356)
Q Consensus 40 ~~vvVvGgG~iGlE~A~~L~~~G~~Vtlv~~~~~ 73 (356)
.++.|||.|.+|..+|..|.+.|.+|+++++.+.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 6899999999999999999999999999987653
No 498
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=87.83 E-value=0.45 Score=40.63 Aligned_cols=36 Identities=14% Similarity=0.213 Sum_probs=31.8
Q ss_pred cEEEEC-CchHHHHHHHHHHHCCCcEEEEeeCCccCC
Q 018416 41 NAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCMA 76 (356)
Q Consensus 41 ~vvVvG-gG~iGlE~A~~L~~~G~~Vtlv~~~~~~l~ 76 (356)
+++|.| +|++|..++..|.+.|.+|+++.|.+.-..
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~ 38 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVP 38 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSC
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchh
Confidence 689998 799999999999999999999999875443
No 499
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=87.82 E-value=0.62 Score=42.21 Aligned_cols=35 Identities=26% Similarity=0.381 Sum_probs=31.1
Q ss_pred CCCCcEEEECCch-HHHHHHHHHHHCCCcEEEEeeC
Q 018416 37 CSGGNAVVIGGGY-IGMECAASLVINKINVTMVFPE 71 (356)
Q Consensus 37 ~~~~~vvVvGgG~-iGlE~A~~L~~~G~~Vtlv~~~ 71 (356)
..+++++|||.|. +|--+|..|.+.|..||++++.
T Consensus 158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~ 193 (285)
T 3p2o_A 158 LEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK 193 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 4789999999655 7999999999999999999864
No 500
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=87.82 E-value=1.6 Score=38.72 Aligned_cols=52 Identities=17% Similarity=0.119 Sum_probs=40.4
Q ss_pred CCCcEEEECC-chHHHHHHHHHHHCCCcEEEEeeCCccCCccCCHHHHHHHHHHHHhCCCEE
Q 018416 38 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKF 98 (356)
Q Consensus 38 ~~~~vvVvGg-G~iGlE~A~~L~~~G~~Vtlv~~~~~~l~~~~d~~~~~~~~~~l~~~GV~v 98 (356)
++|.++|-|+ +-||.++|..|++.|.+|.++.+. ++-.+.+.+.+++.|.++
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~---------~~~~~~~~~~i~~~g~~~ 58 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELL---------EDRLNQIVQELRGMGKEV 58 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---------HHHHHHHHHHHHHTTCCE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC---------HHHHHHHHHHHHhcCCcE
Confidence 6788888874 579999999999999999998763 344556667777777654
Done!