BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018419
(356 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SAK5|APL_ARATH Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL
PE=2 SV=2
Length = 358
Score = 185 bits (470), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/162 (57%), Positives = 119/162 (73%), Gaps = 22/162 (13%)
Query: 10 LVLSTDAKPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKY 69
LVL+TD KPRL+WT ELH+RFVDAV LGGPDKATPK++MRVMG+ GLTLYHLKSHLQK+
Sbjct: 27 LVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKF 86
Query: 70 RLGKSQHVEACIDNKQ------VVEYKETQSSSDGHVNRNISDGTLNQLNDLQIAQALQV 123
RLGK H E + + ++ + +SS G ++RN++ ++
Sbjct: 87 RLGKQPHKEYGDHSTKEGSRASAMDIQRNVASSSGMMSRNMN----------------EM 130
Query: 124 QMEVQRKLHEQIEVQRHLQLRIEAQGKYLQSVLKKAQETLAG 165
QMEVQR+LHEQ+EVQRHLQLRIEAQGKY+QS+L++A +TLAG
Sbjct: 131 QMEVQRRLHEQLEVQRHLQLRIEAQGKYMQSILERACQTLAG 172
>sp|Q8GUN5|PHL1_ARATH Protein PHR1-LIKE 1 OS=Arabidopsis thaliana GN=PHL1 PE=1 SV=1
Length = 413
Score = 139 bits (350), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 105/160 (65%), Gaps = 20/160 (12%)
Query: 16 AKPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKSQ 75
+K R++WTPELH+ FV+AVN LGG ++ATPK++++++ PGLT+YH+KSHLQKYR +
Sbjct: 230 SKQRMRWTPELHEAFVEAVNQLGGSERATPKAVLKLLNNPGLTIYHVKSHLQKYRTAR-- 287
Query: 76 HVEACIDNKQVVEYKETQSSSDGHVNR----NISD-GTLNQLNDLQIAQALQVQMEVQRK 130
YK S G +I D +L+ ++I QAL++QMEVQ++
Sbjct: 288 -------------YKPETSEVTGEPQEKKMTSIEDIKSLDMKTSVEITQALRLQMEVQKR 334
Query: 131 LHEQIEVQRHLQLRIEAQGKYLQSVLKKAQETLAGYSSSS 170
LHEQ+E+QR LQL+IE QG+YLQ + +K Q+ SSSS
Sbjct: 335 LHEQLEIQRSLQLQIEKQGRYLQMMFEKQQKIQDNKSSSS 374
>sp|Q700D9|MYBF_ARATH Putative Myb family transcription factor At1g14600 OS=Arabidopsis
thaliana GN=At1g14600 PE=2 SV=2
Length = 255
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 43/53 (81%)
Query: 18 PRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYR 70
PRL+WTPELH+ FV AV+ LGG KATPK ++++M + GLT+ H+KSHLQ YR
Sbjct: 24 PRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQMYR 76
>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Arabidopsis thaliana
GN=ARR2 PE=1 SV=1
Length = 664
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 46/66 (69%), Gaps = 7/66 (10%)
Query: 17 KPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYRL----- 71
KPR+ W+ ELHQ+FV AVN LG DKA PK ++ +M +PGLT ++ SHLQKYR+
Sbjct: 216 KPRVVWSVELHQQFVAAVNQLG-VDKAVPKKILEMMNVPGLTRENVASHLQKYRIYLRRL 274
Query: 72 -GKSQH 76
G SQH
Sbjct: 275 GGVSQH 280
>sp|Q93WJ9|KAN1_ARATH Transcription repressor KAN1 OS=Arabidopsis thaliana GN=KAN1 PE=1
SV=1
Length = 403
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 42/57 (73%)
Query: 18 PRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKS 74
PR++WT LH RFV AV LGG ++ATPKS++ +M + LTL H+KSHLQ YR K+
Sbjct: 220 PRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKT 276
>sp|Q9C616|KAN2_ARATH Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2
PE=2 SV=1
Length = 388
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 42/57 (73%)
Query: 18 PRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKS 74
PR++WT LH RFV AV LGG ++ATPKS++ +M + LTL H+KSHLQ YR K+
Sbjct: 214 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKT 270
>sp|Q941I2|KAN3_ARATH Probable transcription factor KAN3 OS=Arabidopsis thaliana GN=KAN3
PE=2 SV=1
Length = 322
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 41/57 (71%)
Query: 18 PRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKS 74
PR++WT LH FV AV LGG ++ATPKS++ +M + LTL H+KSHLQ YR KS
Sbjct: 165 PRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQMYRTIKS 221
>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1 OS=Arabidopsis thaliana
GN=ARR1 PE=1 SV=2
Length = 690
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 7/66 (10%)
Query: 17 KPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYRL----- 71
KPR+ W+ ELHQ+FV AVN LG +KA PK ++ +M +PGLT ++ SHLQKYR+
Sbjct: 237 KPRVVWSVELHQQFVAAVNQLG-VEKAVPKKILELMNVPGLTRENVASHLQKYRIYLRRL 295
Query: 72 -GKSQH 76
G SQH
Sbjct: 296 GGVSQH 301
>sp|Q9FJV5|KAN4_ARATH Probable transcription factor KAN4 OS=Arabidopsis thaliana GN=KAN4
PE=1 SV=1
Length = 276
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 18 PRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKSQHV 77
PR++WT LH FV AV LGG ++ATPKS++ +M + LTL H+KSHLQ YR K
Sbjct: 106 PRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVK---- 161
Query: 78 EACID----NKQVVEYKETQSSSDGHVNRNISDGT 108
C D + VE + Q D + N +GT
Sbjct: 162 --CTDKGSPGEGKVEKEAEQRIEDNNNNEEADEGT 194
>sp|Q0J235|ROLL9_ORYSJ Probable transcription factor RL9 OS=Oryza sativa subsp. japonica
GN=RL9 PE=2 SV=2
Length = 532
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%)
Query: 18 PRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKS 74
PR++WT LH RFV AV LGG ++ATPKS++ +M + LTL H+KSHLQ YR KS
Sbjct: 325 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKS 381
>sp|Q8L9Y3|ARR14_ARATH Two-component response regulator ARR14 OS=Arabidopsis thaliana
GN=ARR14 PE=1 SV=2
Length = 382
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 17 KPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYRL 71
K R+ W+ ELHQ+FV+AVN LG DKA PK ++ +M +PGL+ ++ SHLQK+RL
Sbjct: 200 KSRVVWSIELHQQFVNAVNKLG-IDKAVPKRILELMNVPGLSRENVASHLQKFRL 253
>sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana
GN=ARR18 PE=2 SV=2
Length = 635
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 14 TDAKPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYRL 71
T KPR+ W+ ELHQ+FV AV LG DKA PK ++ +M I GLT ++ SHLQKYRL
Sbjct: 191 TRKKPRVVWSQELHQKFVSAVQQLGL-DKAVPKKILDLMSIEGLTRENVASHLQKYRL 247
>sp|Q5Z5I4|GLK1_ORYSJ Probable transcription factor GLK1 OS=Oryza sativa subsp. japonica
GN=GLK1 PE=2 SV=1
Length = 455
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 20 LKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYR 70
+ WTPELH+RFV AV LG DKA P ++ +MGI LT +++ SHLQKYR
Sbjct: 183 VDWTPELHRRFVQAVEQLGI-DKAVPSRILEIMGIDSLTRHNIASHLQKYR 232
>sp|Q9FFH0|GLK2_ARATH Transcription activator GLK2 OS=Arabidopsis thaliana GN=GLK2 PE=2
SV=1
Length = 386
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 17 KPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYR 70
KP++ WTPELH++FV AV LG DKA P ++ +M + LT +++ SHLQKYR
Sbjct: 147 KPKVDWTPELHRKFVQAVEQLGV-DKAVPSRILEIMNVKSLTRHNVASHLQKYR 199
>sp|Q5NAN5|GLK2_ORYSJ Probable transcription factor GLK2 OS=Oryza sativa subsp. japonica
GN=GLK2 PE=2 SV=1
Length = 539
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 17 KPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYR 70
K ++ WTPELH+RFV AV LG DKA P ++ +MGI LT +++ SHLQKYR
Sbjct: 215 KVKVDWTPELHRRFVQAVEQLGI-DKAVPSRILELMGIECLTRHNIASHLQKYR 267
>sp|Q7Y0W5|EHD1_ORYSJ Two-component response regulator EHD1 OS=Oryza sativa subsp.
japonica GN=EHD1 PE=1 SV=1
Length = 341
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 16 AKPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYRL 71
K RL WT +LH++F+ AVNHLG DKA PK ++ +M + LT + SHLQKYR+
Sbjct: 197 GKSRLTWTTQLHRQFIAAVNHLGE-DKAVPKKILGIMKVKHLTREQVASHLQKYRM 251
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza sativa subsp. indica
PE=2 SV=1
Length = 341
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 16 AKPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYRL 71
K RL WT +LH++F+ AVNHLG DKA PK ++ +M + LT + SHLQKYR+
Sbjct: 197 GKSRLTWTTQLHRQFIAAVNHLGE-DKAVPKKILGIMKVKHLTREQVASHLQKYRM 251
>sp|Q9LZJ8|ARR20_ARATH Putative two-component response regulator ARR20 OS=Arabidopsis
thaliana GN=ARR20 PE=2 SV=1
Length = 426
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Query: 13 STDAKPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVM----GIPGLTLYHLKSHLQK 68
S KPR++WTPELH +F AV +G +KA PK++++ M + GLT ++ SHLQK
Sbjct: 207 SPTKKPRMQWTPELHHKFEVAVEKMGSLEKAFPKTILKYMQEELNVQGLTRNNVASHLQK 266
Query: 69 YR 70
YR
Sbjct: 267 YR 268
>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 OS=Arabidopsis thaliana
GN=ARR11 PE=1 SV=1
Length = 521
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%)
Query: 19 RLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYRL 71
R+ W+ ELH +FV+AVN +G KA PK ++ +M +P LT ++ SHLQKYRL
Sbjct: 195 RVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYRL 247
>sp|Q9SIV3|GLK1_ARATH Transcription activator GLK1 OS=Arabidopsis thaliana GN=GLK1 PE=2
SV=2
Length = 420
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 17 KPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYR 70
K ++ WTPELH+RFV+AV LG DKA P ++ +MG+ LT +++ SHLQKYR
Sbjct: 153 KVKVDWTPELHRRFVEAVEQLGV-DKAVPSRILELMGVHCLTRHNVASHLQKYR 205
>sp|Q9M9B9|ARR19_ARATH Putative two-component response regulator ARR19 OS=Arabidopsis
thaliana GN=ARR19 PE=2 SV=2
Length = 407
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
Query: 17 KPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRV---MGIPGLTLYHLKSHLQKYRL 71
KPR+ WT ELHQ+F++A+ +GG +KA PK L+ M I G+T ++ SHLQK+R+
Sbjct: 215 KPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVASHLQKHRI 272
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=Arabidopsis thaliana
GN=ARR10 PE=1 SV=1
Length = 552
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 17 KPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYRLG 72
KPR+ WT ELH +F+ AV+HL G ++A PK ++ +M + LT ++ SHLQK+R+
Sbjct: 183 KPRVLWTHELHNKFLAAVDHL-GVERAVPKKILDLMNVDKLTRENVASHLQKFRVA 237
>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ARR21 OS=Arabidopsis
thaliana GN=ARR21 PE=2 SV=3
Length = 613
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 17 KPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYRL 71
K +++WT LH F+ A+ H+G DKA PK ++ M +P LT ++ SHLQKYR+
Sbjct: 222 KKKIQWTDSLHDLFLQAIRHIGL-DKAVPKKILAFMSVPYLTRENVASHLQKYRI 275
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 17 KPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYRL 71
K R+ WT ELH++FV AVN LG +KA PK ++ +M + LT ++ SHLQK+RL
Sbjct: 195 KQRVVWTVELHKKFVAAVNQLGY-EKAMPKKILDLMNVEKLTRENVASHLQKFRL 248
>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2 OS=Arabidopsis thaliana
GN=APRR2 PE=2 SV=2
Length = 535
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 19 RLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYR 70
++ WTPELH++FV AV LG D+A P ++ +M + LT +++ SHLQK+R
Sbjct: 298 KVDWTPELHKKFVQAVEQLGV-DQAIPSRILELMKVGTLTRHNVASHLQKFR 348
>sp|Q9ZVD3|ARR13_ARATH Putative two-component response regulator ARR13 OS=Arabidopsis
thaliana GN=ARR13 PE=2 SV=2
Length = 572
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 17 KPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYRL 71
K ++ WT L F+ A+ H+G DK PK ++ +M +P LT ++ SHLQKYRL
Sbjct: 225 KKKIWWTNPLQDLFLQAIQHIGY-DKVVPKKILAIMNVPYLTRENVASHLQKYRL 278
>sp|Q9C9F6|APRR6_ARATH Putative two-component response regulator-like APRR6 OS=Arabidopsis
thaliana GN=APRR6 PE=3 SV=2
Length = 755
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 22 WTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYR 70
W E H +F+ A++ LG D PKS++ +M P LT + SHLQKY+
Sbjct: 227 WNSERHMKFIAAISILGEED-FRPKSILEIMNDPNLTHRQVGSHLQKYK 274
>sp|Q9FJ16|APRR4_ARATH Putative two-component response regulator-like APRR4 OS=Arabidopsis
thaliana GN=APRR4 PE=3 SV=1
Length = 292
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 13 STDAKPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQ 67
S+ K R+ W ELHQ F++AV+ L G ++A PK ++ VM + ++ ++ SHLQ
Sbjct: 219 SSAKKRRVVWDEELHQNFLNAVDFL-GLERAVPKKILDVMKVDYISRENVASHLQ 272
>sp|Q8WI08|CEMA_PSINU Chloroplast envelope membrane protein OS=Psilotum nudum GN=cemA
PE=3 SV=1
Length = 449
Score = 32.7 bits (73), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 87 VEYKETQSSSDGHVNRNISDGTLNQLNDLQIAQA----LQVQMEVQRKLHEQIEVQRHLQ 142
V+Y +S++ +NR ++ LNDL+I + +E++ +L E++ + + ++
Sbjct: 120 VKYMSKKSNNREKMNRRLA-WIETTLNDLRICKKYFYNFPFSVEIKDRLDEELSISKSIE 178
Query: 143 LRIEAQGKY---------LQSVLKKAQETLAGYSSSSAGVELAKAELSQLVSMVSMGC 191
L + Y + L + + L G SSS E A+ L S+ MGC
Sbjct: 179 LTVPTTIAYESINIVPRSITRTLSRFKAELIGQSSSLVLHEFKLAKYQALASLRYMGC 236
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.126 0.343
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,885,227
Number of Sequences: 539616
Number of extensions: 4746903
Number of successful extensions: 14083
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 162
Number of HSP's that attempted gapping in prelim test: 13549
Number of HSP's gapped (non-prelim): 533
length of query: 356
length of database: 191,569,459
effective HSP length: 118
effective length of query: 238
effective length of database: 127,894,771
effective search space: 30438955498
effective search space used: 30438955498
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)