Query 018419
Match_columns 356
No_of_seqs 192 out of 420
Neff 3.3
Searched_HMMs 46136
Date Fri Mar 29 08:51:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018419.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018419hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF14379 Myb_CC_LHEQLE: MYB-CC 99.9 2.4E-25 5.2E-30 166.1 6.7 50 115-164 2-51 (51)
2 PLN03162 golden-2 like transcr 99.9 8.8E-24 1.9E-28 208.7 6.7 65 14-79 232-296 (526)
3 TIGR01557 myb_SHAQKYF myb-like 99.8 1.1E-21 2.3E-26 148.3 6.2 56 17-72 1-56 (57)
4 PF00249 Myb_DNA-binding: Myb- 97.3 0.00051 1.1E-08 49.0 5.3 48 19-70 1-48 (48)
5 smart00426 TEA TEA domain. 89.6 0.39 8.5E-06 38.6 3.3 46 21-68 5-67 (68)
6 PF15235 GRIN_C: G protein-reg 78.8 1.5 3.2E-05 39.5 2.3 20 135-154 70-89 (137)
7 PF14379 Myb_CC_LHEQLE: MYB-CC 74.8 8.7 0.00019 29.5 5.1 20 130-149 7-26 (51)
8 smart00501 BRIGHT BRIGHT, ARID 60.1 8.3 0.00018 30.9 2.6 46 25-71 33-85 (93)
9 PF12776 Myb_DNA-bind_3: Myb/S 54.7 15 0.00032 28.8 3.1 54 21-74 1-66 (96)
10 smart00717 SANT SANT SWI3, AD 54.0 40 0.00087 22.1 4.8 43 20-68 2-45 (49)
11 PF01285 TEA: TEA/ATTS domain 52.7 13 0.00028 38.6 3.2 53 16-69 46-112 (431)
12 cd00167 SANT 'SWI3, ADA2, N-Co 50.7 55 0.0012 21.2 5.0 44 21-69 1-44 (45)
13 TIGR02894 DNA_bind_RsfA transc 45.7 12 0.00026 34.6 1.5 51 14-70 43-93 (161)
14 PF01519 DUF16: Protein of unk 38.6 1.9E+02 0.0042 25.1 7.6 21 139-159 70-90 (102)
15 PF07384 DUF1497: Protein of u 29.2 47 0.001 25.9 2.2 22 20-41 36-57 (59)
16 KOG3841 TEF-1 and related tran 27.9 32 0.0007 36.0 1.5 57 17-75 74-147 (455)
No 1
>PF14379 Myb_CC_LHEQLE: MYB-CC type transfactor, LHEQLE motif
Probab=99.92 E-value=2.4e-25 Score=166.08 Aligned_cols=50 Identities=76% Similarity=1.086 Sum_probs=48.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhc
Q 018419 115 LQIAQALQVQMEVQRKLHEQIEVQRHLQLRIEAQGKYLQSVLKKAQETLA 164 (356)
Q Consensus 115 ~qI~EALr~QmEVQrrLHEQLEVQRhLQlRIEAQGKYLQsiLEKAqe~La 164 (356)
++|+|||++||||||||||||||||+||+|||||||||++|||+|+++++
T Consensus 2 ~~i~EALr~QmEvQrrLhEQLEvQr~Lqlrieaqgkyl~~ilek~~~~~s 51 (51)
T PF14379_consen 2 MQITEALRMQMEVQRRLHEQLEVQRHLQLRIEAQGKYLQSILEKAQKALS 51 (51)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 68999999999999999999999999999999999999999999999874
No 2
>PLN03162 golden-2 like transcription factor; Provisional
Probab=99.89 E-value=8.8e-24 Score=208.72 Aligned_cols=65 Identities=43% Similarity=0.751 Sum_probs=60.4
Q ss_pred cCCCCccccChHHHHHHHHHHHHhCCCCCCCchhHHhhhCCCCccHHhHHHhhhhhhhccccchhh
Q 018419 14 TDAKPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKSQHVEA 79 (356)
Q Consensus 14 t~~KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~v~GLT~~hVKSHLQKYRl~~~~~~~~ 79 (356)
..+|+||+||+|||++||+||++|| .++||||+||++|+|+|||++||||||||||+.+++....
T Consensus 232 g~KKpRLrWTpELH~rFVeAV~qLG-~dKATPK~ILelMnV~GLTRenVKSHLQKYRl~rk~l~~r 296 (526)
T PLN03162 232 GKKKAKVDWTPELHRRFVHAVEQLG-VEKAFPSRILELMGVQCLTRHNIASHLQKYRSHRRHLAAR 296 (526)
T ss_pred CCCCCcccCCHHHHHHHHHHHHHhC-cCccchHHHHHHcCCCCcCHHHHHHHHHHHHHhcccccch
Confidence 3689999999999999999999999 7999999999999999999999999999999998865443
No 3
>TIGR01557 myb_SHAQKYF myb-like DNA-binding domain, SHAQKYF class. This model describes a DNA-binding domain restricted to (but common in) plant proteins, many of which also contain a response regulator domain. The domain appears related to the Myb-like DNA-binding domain described by Pfam model pfam00249. It is distinguished in part by a well-conserved motif SH[AL]QKY[RF] at the C-terminal end of the motif.
Probab=99.85 E-value=1.1e-21 Score=148.34 Aligned_cols=56 Identities=57% Similarity=0.974 Sum_probs=54.5
Q ss_pred CCccccChHHHHHHHHHHHHhCCCCCCCchhHHhhhCCCCccHHhHHHhhhhhhhc
Q 018419 17 KPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYRLG 72 (356)
Q Consensus 17 KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~v~GLT~~hVKSHLQKYRl~ 72 (356)
|+|++||+|+|.+|++||+.||+.+.||||.|+++|++++||+.||+|||||||+.
T Consensus 1 k~r~~WT~eeh~~Fl~ai~~~G~g~~a~pk~I~~~~~~~~lT~~qV~SH~QKy~~k 56 (57)
T TIGR01557 1 KPRVVWTEDLHDRFLQAVQKLGGPDWATPKRILELMVVDGLTRDQVASHLQKYRLK 56 (57)
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCcccchHHHHHHcCCCCCCHHHHHHHHHHHHcc
Confidence 79999999999999999999998899999999999999999999999999999985
No 4
>PF00249 Myb_DNA-binding: Myb-like DNA-binding domain; InterPro: IPR014778 The retroviral oncogene v-myb, and its cellular counterpart c-myb, encode nuclear DNA-binding proteins. These belong to the SANT domain family that specifically recognise the sequence YAAC(G/T)G [, ]. In myb, one of the most conserved regions consisting of three tandem repeats has been shown to be involved in DNA-binding [].; PDB: 1X41_A 2XAF_B 2XAG_B 2XAH_B 2UXN_B 2Y48_B 2XAQ_B 2X0L_B 2IW5_B 2XAJ_B ....
Probab=97.33 E-value=0.00051 Score=49.05 Aligned_cols=48 Identities=29% Similarity=0.405 Sum_probs=41.2
Q ss_pred ccccChHHHHHHHHHHHHhCCCCCCCchhHHhhhCCCCccHHhHHHhhhhhh
Q 018419 19 RLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYR 70 (356)
Q Consensus 19 RlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~v~GLT~~hVKSHLQKYR 70 (356)
|..||++=+..|++||.++|. . .-+.|-+.|+ ++-|..++++|.++|+
T Consensus 1 r~~Wt~eE~~~l~~~v~~~g~-~--~W~~Ia~~~~-~~Rt~~qc~~~~~~~~ 48 (48)
T PF00249_consen 1 RGPWTEEEDEKLLEAVKKYGK-D--NWKKIAKRMP-GGRTAKQCRSRYQNLL 48 (48)
T ss_dssp S-SS-HHHHHHHHHHHHHSTT-T--HHHHHHHHHS-SSSTHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHhCC-c--HHHHHHHHcC-CCCCHHHHHHHHHhhC
Confidence 568999999999999999992 1 4789999998 8999999999999985
No 5
>smart00426 TEA TEA domain.
Probab=89.57 E-value=0.39 Score=38.59 Aligned_cols=46 Identities=28% Similarity=0.418 Sum_probs=29.6
Q ss_pred ccChHHHHHHHHHHHHhCCCCCCCch-hHHhh---hC-----------CCCc--cHHhHHHhhhh
Q 018419 21 KWTPELHQRFVDAVNHLGGPDKATPK-SLMRV---MG-----------IPGL--TLYHLKSHLQK 68 (356)
Q Consensus 21 rWT~ELH~rFV~AV~qLGG~dkAtPK-~IL~l---M~-----------v~GL--T~~hVKSHLQK 68 (356)
+|.++|-..|++|+...- ...+-| .+... .| ..|. |..+|.||+|.
T Consensus 5 vWp~~lE~Af~~aL~~~~--~~g~~kik~~~r~k~~gRNelIs~YI~~~tGk~Rt~KQVsShIQv 67 (68)
T smart00426 5 VWSPDIEQAFQEALAIYP--PCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQV 67 (68)
T ss_pred cCcHHHHHHHHHHHHHcC--ccCcccchhhhcCcccchhHHHHHHHHHHhCCccchhhhcchhee
Confidence 699999999999999774 222222 12111 11 2444 67889999984
No 6
>PF15235 GRIN_C: G protein-regulated inducer of neurite outgrowth C-terminus
Probab=78.84 E-value=1.5 Score=39.47 Aligned_cols=20 Identities=25% Similarity=0.484 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHhhHHHHH
Q 018419 135 IEVQRHLQLRIEAQGKYLQS 154 (356)
Q Consensus 135 LEVQRhLQlRIEAQGKYLQs 154 (356)
+.||+||+++|+.|++.+..
T Consensus 70 ~AIQkHLE~qi~e~~~q~~~ 89 (137)
T PF15235_consen 70 MAIQKHLERQIEEHERQRAP 89 (137)
T ss_pred HHHHHHHHHHHHHhhhcccc
Confidence 35899999999999998754
No 7
>PF14379 Myb_CC_LHEQLE: MYB-CC type transfactor, LHEQLE motif
Probab=74.84 E-value=8.7 Score=29.47 Aligned_cols=20 Identities=45% Similarity=0.576 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 018419 130 KLHEQIEVQRHLQLRIEAQG 149 (356)
Q Consensus 130 rLHEQLEVQRhLQlRIEAQG 149 (356)
-|..|+||||+|.=.+|.|.
T Consensus 7 ALr~QmEvQrrLhEQLEvQr 26 (51)
T PF14379_consen 7 ALRMQMEVQRRLHEQLEVQR 26 (51)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45556666666655555553
No 8
>smart00501 BRIGHT BRIGHT, ARID (A/T-rich interaction domain) domain. DNA-binding domain containing a helix-turn-helix structure
Probab=60.14 E-value=8.3 Score=30.94 Aligned_cols=46 Identities=33% Similarity=0.538 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHhCCCCCCC----chhHHhhhCCCCc---cHHhHHHhhhhhhh
Q 018419 25 ELHQRFVDAVNHLGGPDKAT----PKSLMRVMGIPGL---TLYHLKSHLQKYRL 71 (356)
Q Consensus 25 ELH~rFV~AV~qLGG~dkAt----PK~IL~lM~v~GL---T~~hVKSHLQKYRl 71 (356)
+|+.-|. +|..+||.+..+ =+.|.+.||++.- ...++++|..||=+
T Consensus 33 dL~~Ly~-~V~~~GG~~~v~~~~~W~~Va~~lg~~~~~~~~~~~lk~~Y~k~L~ 85 (93)
T smart00501 33 DLYRLYR-LVQERGGYDQVTKDKKWKEIARELGIPDTSTSAASSLRKHYERYLL 85 (93)
T ss_pred cHHHHHH-HHHHccCHHHHcCCCCHHHHHHHhCCCcccchHHHHHHHHHHHHhH
Confidence 7898897 699999977544 2668899999752 35678999998854
No 9
>PF12776 Myb_DNA-bind_3: Myb/SANT-like DNA-binding domain; InterPro: IPR024752 This domain, found in a range of uncharacterised proteins, may be related to Myb/SANT-like DNA binding domains.
Probab=54.65 E-value=15 Score=28.84 Aligned_cols=54 Identities=19% Similarity=0.286 Sum_probs=35.7
Q ss_pred ccChHHHHHHHHHHHHh---CCC-CCCCch-----hHHhhhCC---CCccHHhHHHhhhhhhhccc
Q 018419 21 KWTPELHQRFVDAVNHL---GGP-DKATPK-----SLMRVMGI---PGLTLYHLKSHLQKYRLGKS 74 (356)
Q Consensus 21 rWT~ELH~rFV~AV~qL---GG~-dkAtPK-----~IL~lM~v---~GLT~~hVKSHLQKYRl~~~ 74 (356)
+||++..+-||+.+-+. |.- .....| .|.+.|+- -.+|..||++|+...|..-.
T Consensus 1 ~Wt~~~~~~ll~~~~e~~~~g~~~~~~~fk~~~w~~i~~~~~~~~~~~~t~~qlknk~~~lk~~y~ 66 (96)
T PF12776_consen 1 SWTPEMTRFLLDLLIEQINKGNRPTNGGFKKEGWNNIAEEFNEKTGLNYTKKQLKNKWKTLKKDYR 66 (96)
T ss_pred CCChHHHHHHHHHHHHHHHhCCCCCCCCcCHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHH
Confidence 59999999999988644 433 233333 34555543 44688999999886655433
No 10
>smart00717 SANT SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains.
Probab=54.00 E-value=40 Score=22.14 Aligned_cols=43 Identities=16% Similarity=0.301 Sum_probs=32.2
Q ss_pred cccChHHHHHHHHHHHHhC-CCCCCCchhHHhhhCCCCccHHhHHHhhhh
Q 018419 20 LKWTPELHQRFVDAVNHLG-GPDKATPKSLMRVMGIPGLTLYHLKSHLQK 68 (356)
Q Consensus 20 lrWT~ELH~rFV~AV~qLG-G~dkAtPK~IL~lM~v~GLT~~hVKSHLQK 68 (356)
-.||++=...|+.+|.++| +. =+.|-..|+ +=|...|+.+...
T Consensus 2 ~~Wt~~E~~~l~~~~~~~g~~~----w~~Ia~~~~--~rt~~~~~~~~~~ 45 (49)
T smart00717 2 GEWTEEEDELLIELVKKYGKNN----WEKIAKELP--GRTAEQCRERWNN 45 (49)
T ss_pred CCCCHHHHHHHHHHHHHHCcCC----HHHHHHHcC--CCCHHHHHHHHHH
Confidence 4699999999999999998 33 355666654 6677777776554
No 11
>PF01285 TEA: TEA/ATTS domain family; InterPro: IPR000818 Transcriptional enhancer activators are nuclear proteins that contain a TEA/ATTSdomain, a DNA-binding region of 66-68 amino acids. The TEA/ATTS domain is found in the N-termini of certain gene regulatory proteins, such as the Simian virus 40 (SV40) enhancer factor TEF-1, yeast trans-acting factor TEC-1 (which is required for TY1 enhancer activity), and the Aspergillus abaA regulatory gene product. SV40 and retroviral enhancers, and those to which TEF-1, TEC-1 and abaA proteins bind, contain GT-IIC sites: the TEA/ATTS domain may therefore recognise and bind such sites. Secondary structure predictions suggest the presence of 3 helices, but have not confirmed the presence of the helix-turn-helix motif characteristic of many DNA-binding proteins: DNA-binding may therefore be effected by a different mechanism [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3L15_B 2HZD_A 3KYS_A 3JUA_C 4EAZ_B.
Probab=52.71 E-value=13 Score=38.64 Aligned_cols=53 Identities=23% Similarity=0.347 Sum_probs=28.8
Q ss_pred CCCccccChHHHHHHHHHHHHhCCCCCCCchhHH-hhhC----------C-CC--ccHHhHHHhhhhh
Q 018419 16 AKPRLKWTPELHQRFVDAVNHLGGPDKATPKSLM-RVMG----------I-PG--LTLYHLKSHLQKY 69 (356)
Q Consensus 16 ~KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL-~lM~----------v-~G--LT~~hVKSHLQKY 69 (356)
.+..-+|++++...|++|+...-=-.+++ -.+. ++.| . .| =|+.+|.||+|..
T Consensus 46 ~~~~~vw~~~~e~af~~al~~~~~~g~~k-~~~~~~~~grn~li~~yi~~~tg~~rt~kqvsshiqvl 112 (431)
T PF01285_consen 46 GDGEGVWPPDIEQAFQEALAIYPPCGRRK-LSDEGKMYGRNELISDYIKLKTGKTRTRKQVSSHIQVL 112 (431)
T ss_dssp GGGS--S-HHHHHHHHHHHHHS-SSS----HHHH-----THHHHHHHHHHHHS----SHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHhCCCCCCcc-cccccccccchhHHHHHHHHHhCcccchhHHHHHHHHH
Confidence 56788999999999999998763111222 1111 1111 1 23 4778999999988
No 12
>cd00167 SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is also found in regulatory transcriptional repressor complexes where it also binds DNA.
Probab=50.69 E-value=55 Score=21.23 Aligned_cols=44 Identities=18% Similarity=0.330 Sum_probs=32.6
Q ss_pred ccChHHHHHHHHHHHHhCCCCCCCchhHHhhhCCCCccHHhHHHhhhhh
Q 018419 21 KWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKY 69 (356)
Q Consensus 21 rWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~v~GLT~~hVKSHLQKY 69 (356)
.||++=+..|+.++..+|- ..-+.|-+.|+ +=|...|+.|..++
T Consensus 1 ~Wt~eE~~~l~~~~~~~g~---~~w~~Ia~~~~--~rs~~~~~~~~~~~ 44 (45)
T cd00167 1 PWTEEEDELLLEAVKKYGK---NNWEKIAKELP--GRTPKQCRERWRNL 44 (45)
T ss_pred CCCHHHHHHHHHHHHHHCc---CCHHHHHhHcC--CCCHHHHHHHHHHh
Confidence 4999999999999999992 22456666664 46777788776543
No 13
>TIGR02894 DNA_bind_RsfA transcription factor, RsfA family. In a subset of endospore-forming members of the Firmcutes, members of this protein family are found, several to a genome. Two very strongly conserved sequences regions are separated by a highly variable linker region. Much of the linker region was excised from the seed alignment for this model. A characterized member is the prespore-specific transcription RsfA from Bacillus subtilis, previously called YwfN, which is controlled by sigma factor F and seems to fine-tune expression of some genes in the sigma-F regulon. A paralog in Bacillus subtilis is designated YlbO.
Probab=45.69 E-value=12 Score=34.63 Aligned_cols=51 Identities=22% Similarity=0.329 Sum_probs=38.0
Q ss_pred cCCCCccccChHHHHHHHHHHHHhCCCCCCCchhHHhhhCCCCccHHhHHHhhhhhh
Q 018419 14 TDAKPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMRVMGIPGLTLYHLKSHLQKYR 70 (356)
Q Consensus 14 t~~KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~v~GLT~~hVKSHLQKYR 70 (356)
|.+...|||+..+-.++.+||...- -.+-.++.. ...||+..|-+-||.|.
T Consensus 43 TsAACGFRWNs~VRkqY~~~i~~AK-kqRk~~~~~-----~~~ltl~~vI~fLq~l~ 93 (161)
T TIGR02894 43 TAAACGFRWNAYVRKQYEEAIELAK-KQRKELKRE-----AGSLTLQDVISFLQNLK 93 (161)
T ss_pred cHHHhcchHHHHHHHHHHHHHHHHH-HHHhccccC-----cccCCHHHHHHHHHHHH
Confidence 4578899999999999999998543 122222211 25699999999999876
No 14
>PF01519 DUF16: Protein of unknown function DUF16; InterPro: IPR002862 Proteins that contain this domain are of unknown function. It appears to be confined to proteins from Mycoplasma pneumoniae [].; PDB: 2BA2_C.
Probab=38.57 E-value=1.9e+02 Score=25.15 Aligned_cols=21 Identities=48% Similarity=0.605 Sum_probs=18.6
Q ss_pred HHHHHHHHHhhHHHHHHHHHH
Q 018419 139 RHLQLRIEAQGKYLQSVLKKA 159 (356)
Q Consensus 139 RhLQlRIEAQGKYLQsiLEKA 159 (356)
+.||.+|.+||+-|++|++.-
T Consensus 70 kel~~e~k~qgktL~~I~~~L 90 (102)
T PF01519_consen 70 KELQVEQKAQGKTLQLILKTL 90 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999843
No 15
>PF07384 DUF1497: Protein of unknown function (DUF1497); InterPro: IPR009972 This entry is represented by Bacteriophage r1t, Orf17. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several phage and bacterial proteins of around 59 residues in length. Members of this family seem to be found exclusively in Lactococcus lactis and the bacteriophages that infect this organism. The function of this family is unknown.
Probab=29.21 E-value=47 Score=25.94 Aligned_cols=22 Identities=27% Similarity=0.641 Sum_probs=19.2
Q ss_pred cccChHHHHHHHHHHHHhCCCC
Q 018419 20 LKWTPELHQRFVDAVNHLGGPD 41 (356)
Q Consensus 20 lrWT~ELH~rFV~AV~qLGG~d 41 (356)
-++..|+|..|-+-|..|||.+
T Consensus 36 ~kfnqem~aefheri~klggk~ 57 (59)
T PF07384_consen 36 NKFNQEMQAEFHERIKKLGGKN 57 (59)
T ss_pred hHhhHHHHHHHHHHHHHhcccc
Confidence 3578999999999999999854
No 16
>KOG3841 consensus TEF-1 and related transcription factor, TEAD family [Transcription]
Probab=27.87 E-value=32 Score=36.05 Aligned_cols=57 Identities=19% Similarity=0.289 Sum_probs=36.5
Q ss_pred CCccccChHHHHHHHHHHHHhCCCCCCCchhHHh--------------hhCC---CCccHHhHHHhhhhhhhcccc
Q 018419 17 KPRLKWTPELHQRFVDAVNHLGGPDKATPKSLMR--------------VMGI---PGLTLYHLKSHLQKYRLGKSQ 75 (356)
Q Consensus 17 KpRlrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~--------------lM~v---~GLT~~hVKSHLQKYRl~~~~ 75 (356)
-.--+|.++.-+.|.+|+...- .--+-|-||. .+.. +-=|+.+|.||.|..-..+.+
T Consensus 74 daegvWSpdIEqsFqEALaiyp--pcGrrKIilsdegkmyGRNELIarYIKlrtgktRTrKQVSSHIQVlarrk~r 147 (455)
T KOG3841|consen 74 DAEGVWSPDIEQSFQEALAIYP--PCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKLR 147 (455)
T ss_pred ccccccChhHHHHHHHHHhhcC--CCCceeEEEccCccccchHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHH
Confidence 3456899999999999998763 1122333331 1111 335788999999976554443
Done!