Your job contains 1 sequence.
>018420
MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC
HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV
RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY
VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC
NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT
YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYMPS
The BLAST search returned 9 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018420
(356 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2147987 - symbol:UAP56a "homolog of human UAP5... 1754 1.0e-180 1
TAIR|locus:2148027 - symbol:UAP56b "homolog of human UAP5... 890 1.0e-178 2
UNIPROTKB|Q5WR10 - symbol:DDX39B "Spliceosome RNA helicas... 1391 2.9e-142 1
UNIPROTKB|Q13838 - symbol:DDX39B "Spliceosome RNA helicas... 1391 2.9e-142 1
UNIPROTKB|Q29024 - symbol:DDX39B "Spliceosome RNA helicas... 1391 2.9e-142 1
MGI|MGI:99240 - symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box... 1391 2.9e-142 1
RGD|70923 - symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box pol... 1391 2.9e-142 1
ZFIN|ZDB-GENE-040426-2902 - symbol:ddx39ab "DEAD (Asp-Glu... 1391 2.9e-142 1
UNIPROTKB|Q3T147 - symbol:DDX39B "Spliceosome RNA helicas... 1390 3.7e-142 1
UNIPROTKB|E2QY95 - symbol:DDX39A "Uncharacterized protein... 1390 3.7e-142 1
UNIPROTKB|F1SCH3 - symbol:DDX39A "Uncharacterized protein... 1390 3.7e-142 1
UNIPROTKB|Q5ZHZ0 - symbol:DDX39B "Spliceosome RNA helicas... 1386 9.9e-142 1
UNIPROTKB|Q5E970 - symbol:DDX39 "DEAD (Asp-Glu-Ala-Asp) b... 1385 1.3e-141 1
UNIPROTKB|O00148 - symbol:DDX39A "ATP-dependent RNA helic... 1385 1.3e-141 1
MGI|MGI:1915528 - symbol:Ddx39 "DEAD (Asp-Glu-Ala-Asp) bo... 1385 1.3e-141 1
RGD|619920 - symbol:Ddx39a "DEAD (Asp-Glu-Ala-Asp) box po... 1385 1.3e-141 1
ZFIN|ZDB-GENE-030131-4275 - symbol:ddx39aa "DEAD (Asp-Glu... 1373 2.4e-140 1
ZFIN|ZDB-GENE-040426-1259 - symbol:ddx39b "DEAD (Asp-Glu-... 1365 1.7e-139 1
UNIPROTKB|F8VQ10 - symbol:DDX39B "Spliceosome RNA helicas... 1354 2.4e-138 1
POMBASE|SPAC17G6.14c - symbol:uap56 "ATP-dependent RNA he... 1351 5.1e-138 1
FB|FBgn0014189 - symbol:Hel25E "Helicase at 25E" species:... 1338 1.2e-136 1
WB|WBGene00001840 - symbol:hel-1 species:6239 "Caenorhabd... 1319 1.2e-134 1
UNIPROTKB|A4RBS3 - symbol:SUB2 "ATP-dependent RNA helicas... 1259 2.8e-128 1
DICTYBASE|DDB_G0269932 - symbol:uap56 "ATP-dependent RNA ... 1246 6.8e-127 1
UNIPROTKB|H0Y7G4 - symbol:DDX39B "Spliceosome RNA helicas... 1236 7.8e-126 1
SGD|S000002242 - symbol:SUB2 "Component of the TREX compl... 1219 4.9e-124 1
UNIPROTKB|Q5STU3 - symbol:DDX39B "Spliceosome RNA helicas... 1214 1.7e-123 1
UNIPROTKB|K9J6N8 - symbol:DDX39B "Spliceosome RNA helicas... 1185 2.0e-120 1
GENEDB_PFALCIPARUM|PFB0445c - symbol:PFB0445c "helicase, ... 1054 7.5e-120 2
UNIPROTKB|Q9TY94 - symbol:UAP56 "DEAD box helicase, UAP56... 1054 7.5e-120 2
UNIPROTKB|B4DP52 - symbol:DDX39B "Spliceosome RNA helicas... 1086 6.1e-110 1
UNIPROTKB|H0Y7X6 - symbol:DDX39B "Spliceosome RNA helicas... 1059 4.4e-107 1
UNIPROTKB|F8VZL8 - symbol:DDX39B "Spliceosome RNA helicas... 926 5.5e-93 1
UNIPROTKB|F6WLT2 - symbol:DDX39B "Spliceosome RNA helicas... 915 8.1e-92 1
UNIPROTKB|Q8N5M0 - symbol:DDX39A "ATP-dependent RNA helic... 901 2.5e-90 1
UNIPROTKB|H0Y557 - symbol:DDX39B "Spliceosome RNA helicas... 760 2.1e-75 1
UNIPROTKB|B1Q2N1 - symbol:DDX39 "ATP-dependent RNA helica... 725 1.1e-71 1
UNIPROTKB|E9PP12 - symbol:DDX39B "Spliceosome RNA helicas... 725 1.1e-71 1
UNIPROTKB|K7EQN7 - symbol:DDX39A "ATP-dependent RNA helic... 725 1.1e-71 1
UNIPROTKB|F6UJC5 - symbol:DDX39B "Spliceosome RNA helicas... 715 1.3e-70 1
UNIPROTKB|H0Y800 - symbol:DDX39B "Spliceosome RNA helicas... 710 4.3e-70 1
UNIPROTKB|F6TRA5 - symbol:DDX39B "Spliceosome RNA helicas... 703 2.4e-69 1
UNIPROTKB|F6UN21 - symbol:DDX39B "Spliceosome RNA helicas... 692 3.5e-68 1
UNIPROTKB|F6S4E6 - symbol:DDX39B "Spliceosome RNA helicas... 669 9.4e-66 1
UNIPROTKB|H0Y400 - symbol:DDX39B "Spliceosome RNA helicas... 649 1.2e-63 1
UNIPROTKB|F8W0J0 - symbol:DDX39B "Spliceosome RNA helicas... 634 4.8e-62 1
SGD|S000002319 - symbol:DHH1 "Cytoplasmic DExD/H-box heli... 618 2.4e-60 1
FB|FBgn0001942 - symbol:eIF-4a "Eukaryotic initiation fac... 616 3.9e-60 1
UNIPROTKB|Q8JFP1 - symbol:EIF4A2 "Eukaryotic initiation f... 613 8.1e-60 1
UNIPROTKB|Q3SZ65 - symbol:EIF4A2 "Eukaryotic initiation f... 613 8.1e-60 1
UNIPROTKB|E2R3J1 - symbol:EIF4A2 "Uncharacterized protein... 613 8.1e-60 1
UNIPROTKB|Q14240 - symbol:EIF4A2 "Eukaryotic initiation f... 613 8.1e-60 1
UNIPROTKB|A6M930 - symbol:EIF4A2 "Eukaryotic translation ... 613 8.1e-60 1
MGI|MGI:106906 - symbol:Eif4a2 "eukaryotic translation in... 613 8.1e-60 1
RGD|1309225 - symbol:Eif4a2 "eukaryotic translation initi... 613 8.1e-60 1
UNIPROTKB|F8WFX2 - symbol:Eif4a2 "Eukaryotic initiation f... 613 8.1e-60 1
SGD|S000002428 - symbol:FAL1 "Nucleolar protein required ... 611 1.3e-59 1
UNIPROTKB|A4R715 - symbol:DHH1 "ATP-dependent RNA helicas... 610 1.7e-59 1
ASPGD|ASPL0000036135 - symbol:AN10417 species:162425 "Eme... 609 2.2e-59 1
WB|WBGene00002083 - symbol:inf-1 species:6239 "Caenorhabd... 608 2.7e-59 1
ZFIN|ZDB-GENE-040426-2802 - symbol:eif4a2 "eukaryotic tra... 607 3.5e-59 1
UNIPROTKB|Q3SZ54 - symbol:EIF4A1 "Eukaryotic initiation f... 606 4.5e-59 1
UNIPROTKB|F1P895 - symbol:EIF4A1 "Uncharacterized protein... 606 4.5e-59 1
UNIPROTKB|J9NY67 - symbol:EIF4A1 "Uncharacterized protein... 606 4.5e-59 1
UNIPROTKB|P60842 - symbol:EIF4A1 "Eukaryotic initiation f... 606 4.5e-59 1
UNIPROTKB|A6M928 - symbol:EIF4A1 "Uncharacterized protein... 606 4.5e-59 1
MGI|MGI:95303 - symbol:Eif4a1 "eukaryotic translation ini... 606 4.5e-59 1
UNIPROTKB|Q6P3V8 - symbol:Eif4a1 "Protein Eif4a1" species... 606 4.5e-59 1
ASPGD|ASPL0000037981 - symbol:AN2932 species:162425 "Emer... 605 5.7e-59 1
CGD|CAL0004095 - symbol:TIF species:5476 "Candida albican... 605 5.7e-59 1
UNIPROTKB|P87206 - symbol:TIF1 "ATP-dependent RNA helicas... 605 5.7e-59 1
UNIPROTKB|J9NU36 - symbol:EIF4A1 "Uncharacterized protein... 603 9.3e-59 1
UNIPROTKB|A4QVP2 - symbol:TIF1 "ATP-dependent RNA helicas... 603 9.3e-59 1
TAIR|locus:2050715 - symbol:AT2G45810 species:3702 "Arabi... 600 1.9e-58 1
ZFIN|ZDB-GENE-031030-2 - symbol:eif4a1a "eukaryotic trans... 599 2.5e-58 1
CGD|CAL0006152 - symbol:DHH1 species:5476 "Candida albica... 594 8.4e-58 1
UNIPROTKB|Q5AAW3 - symbol:DHH1 "ATP-dependent RNA helicas... 594 8.4e-58 1
SGD|S000001767 - symbol:TIF1 "Translation initiation fact... 594 8.4e-58 1
SGD|S000003674 - symbol:TIF2 "Translation initiation fact... 594 8.4e-58 1
POMBASE|SPBC776.09 - symbol:ste13 "ATP-dependent RNA heli... 593 1.1e-57 1
TAIR|locus:2098886 - symbol:AT3G61240 species:3702 "Arabi... 593 1.1e-57 1
ZFIN|ZDB-GENE-030131-6611 - symbol:wu:fk48d07 "wu:fk48d07... 593 1.1e-57 1
ZFIN|ZDB-GENE-040120-6 - symbol:eif4a1b "eukaryotic trans... 592 1.4e-57 1
TAIR|locus:2127043 - symbol:RH8 "RNAhelicase-like 8" spec... 589 2.8e-57 1
FB|FBgn0004419 - symbol:me31B "maternal expression at 31B... 588 3.6e-57 1
UNIPROTKB|I3LLD5 - symbol:I3LLD5 "Uncharacterized protein... 588 3.6e-57 1
DICTYBASE|DDB_G0291804 - symbol:ddx6 "DEAD/DEAH box helic... 586 5.9e-57 1
DICTYBASE|DDB_G0269192 - symbol:tifA "eukaryotic translat... 581 2.0e-56 1
GENEDB_PFALCIPARUM|PF14_0655 - symbol:PF14_0655 "RNA heli... 577 5.3e-56 1
UNIPROTKB|Q8IKF0 - symbol:H45 "Helicase 45" species:36329... 577 5.3e-56 1
ASPGD|ASPL0000014018 - symbol:fal1 species:162425 "Emeric... 576 6.8e-56 1
GENEDB_PFALCIPARUM|PFC0915w - symbol:PFC0915w "ATP-depend... 576 6.8e-56 1
UNIPROTKB|Q5ZKB9 - symbol:DDX6 "Probable ATP-dependent RN... 575 8.6e-56 1
UNIPROTKB|Q5ZM36 - symbol:EIF4A3 "Eukaryotic initiation f... 575 8.6e-56 1
UNIPROTKB|Q2NL22 - symbol:EIF4A3 "Eukaryotic initiation f... 575 8.6e-56 1
UNIPROTKB|E2RDZ4 - symbol:EIF4A3 "Uncharacterized protein... 575 8.6e-56 1
UNIPROTKB|P38919 - symbol:EIF4A3 "Eukaryotic initiation f... 575 8.6e-56 1
UNIPROTKB|A6M931 - symbol:EIF4A3 "Eukaryotic initiation f... 575 8.6e-56 1
RGD|1591139 - symbol:Eif4a3 "eukaryotic translation initi... 575 8.6e-56 1
UNIPROTKB|E1BDM8 - symbol:DDX6 "Uncharacterized protein" ... 573 1.4e-55 1
WARNING: Descriptions of 863 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2147987 [details] [associations]
symbol:UAP56a "homolog of human UAP56 a" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0009506
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046686
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL360314 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ010466 EMBL:AY052303
EMBL:BT001052 EMBL:AK221273 EMBL:AK221708 EMBL:AK226428
IPI:IPI00760330 IPI:IPI00760336 IPI:IPI00760344 PIR:T51343
RefSeq:NP_568244.2 RefSeq:NP_568245.1 UniGene:At.49007
UniGene:At.73904 ProteinModelPortal:Q56XG6 SMR:Q56XG6 IntAct:Q56XG6
STRING:Q56XG6 PRIDE:Q56XG6 EnsemblPlants:AT5G11170.1
EnsemblPlants:AT5G11200.1 GeneID:830986 GeneID:830990
KEGG:ath:AT5G11170 KEGG:ath:AT5G11200 GeneFarm:932 TAIR:At5g11170
InParanoid:Q56XG6 PhylomeDB:Q56XG6 ProtClustDB:CLSN2689601
Genevestigator:Q56XG6 Uniprot:Q56XG6
Length = 427
Score = 1754 (622.5 bits), Expect = 1.0e-180, P = 1.0e-180
Identities = 338/356 (94%), Positives = 350/356 (98%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ EP+PGQV+ALVLCHTRELAYQIC
Sbjct: 72 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQIC 131
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECP IVVGTPGR+LALAR+KDLSLKNV
Sbjct: 132 NEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNV 191
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY
Sbjct: 192 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 251
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
VDDEAKLTLHGLVQHYIKLSE+EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC
Sbjct: 252 VDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 311
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
NFPSICIHSGMSQEERLTRYK FKEG+KRILVATDLVGRGIDIERVNIVINYDMPDSADT
Sbjct: 312 NFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADT 371
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYMPS 356
YLHRVGRAGRFGTKGLAITFV+SASDS++LNQVQ RFEVDIKELPEQIDTSTYMPS
Sbjct: 372 YLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQIDTSTYMPS 427
>TAIR|locus:2148027 [details] [associations]
symbol:UAP56b "homolog of human UAP56 b" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005618
"cell wall" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0009506 GO:GO:0005524 EMBL:CP002688
GO:GO:0005618 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
UniGene:At.49007 UniGene:At.73904 GeneID:830990 KEGG:ath:AT5G11200
OMA:LECVINY IPI:IPI00938969 RefSeq:NP_001154706.1
ProteinModelPortal:F4JWF6 SMR:F4JWF6 PRIDE:F4JWF6
EnsemblPlants:AT5G11200.2 Uniprot:F4JWF6
Length = 486
Score = 890 (318.4 bits), Expect = 1.0e-178, Sum P(2) = 1.0e-178
Identities = 174/181 (96%), Positives = 179/181 (98%)
Query: 176 PMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNK 235
PMEIYVDDEAKLTLHGLVQHYIKLSE+EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNK
Sbjct: 306 PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNK 365
Query: 236 LLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMP 295
LLVECNFPSICIHSGMSQEERLTRYK FKEG+KRILVATDLVGRGIDIERVNIVINYDMP
Sbjct: 366 LLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMP 425
Query: 296 DSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYMP 355
DSADTYLHRVGRAGRFGTKGLAITFV+SASDS++LNQVQ RFEVDIKELPEQIDTSTYMP
Sbjct: 426 DSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQIDTSTYMP 485
Query: 356 S 356
S
Sbjct: 486 S 486
Score = 867 (310.3 bits), Expect = 1.0e-178, Sum P(2) = 1.0e-178
Identities = 165/178 (92%), Positives = 173/178 (97%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ EP+PGQV+ALVLCHTRELAYQIC
Sbjct: 72 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQIC 131
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECP IVVGTPGR+LALAR+KDLSLKNV
Sbjct: 132 NEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNV 191
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPME 178
RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQD +E
Sbjct: 192 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDFLE 249
>UNIPROTKB|Q5WR10 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9615 "Canis lupus familiaris" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IEA]
[GO:0043008 "ATP-dependent protein binding" evidence=IEA]
[GO:0030621 "U4 snRNA binding" evidence=IEA] [GO:0017070 "U6 snRNA
binding" evidence=IEA] [GO:0010501 "RNA secondary structure
unwinding" evidence=IEA] [GO:0005688 "U6 snRNP" evidence=IEA]
[GO:0005687 "U4 snRNP" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
CTD:7919 KO:K12812 OMA:NAENPAI GO:GO:0000346 GO:GO:0005687
GO:GO:0005688 GO:GO:0030621 GO:GO:0046784 EMBL:AY423389
RefSeq:NP_001014399.1 UniGene:Cfa.10131 ProteinModelPortal:Q5WR10
SMR:Q5WR10 Ensembl:ENSCAFT00000036511 GeneID:474839 KEGG:cfa:474839
InParanoid:Q5WR10 NextBio:20850784 Uniprot:Q5WR10
Length = 428
Score = 1391 (494.7 bits), Expect = 2.9e-142, P = 2.9e-142
Identities = 264/354 (74%), Positives = 310/354 (87%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI
Sbjct: 71 VQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQIS 130
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK++
Sbjct: 131 KEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHI 190
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KFMQDPMEI+
Sbjct: 191 KHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIF 250
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE
Sbjct: 251 VDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQ 310
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP+ +DT
Sbjct: 311 NFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDT 370
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
YLHRV RAGRFGTKGLAITFVS +D+ ILN VQ RFEV+I ELP++ID S+Y+
Sbjct: 371 YLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYI 424
>UNIPROTKB|Q13838 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006406 "mRNA export from nucleus"
evidence=IGI;IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IGI] [GO:0000346 "transcription export complex"
evidence=IDA] [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IDA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008380 "RNA splicing" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0043008
"ATP-dependent protein binding" evidence=IDA] [GO:0005687 "U4
snRNP" evidence=IDA] [GO:0005688 "U6 snRNP" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] [GO:0010501 "RNA secondary structure
unwinding" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005737 EMBL:BA000025 EMBL:CH471081
GO:GO:0016607 GO:GO:0005681 TCDB:3.A.18.1.1 EMBL:AL662847
EMBL:AL662801 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
CleanEx:HS_BAT1 GO:GO:0000245 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX CTD:7919 KO:K12812
GO:GO:0000346 GO:GO:0030621 GO:GO:0046784 EMBL:Z37166 EMBL:BT009909
EMBL:AK222912 EMBL:AB088115 EMBL:AB103621 EMBL:AB202112
EMBL:BX001040 EMBL:BX248516 EMBL:BX927320 EMBL:CR753820
EMBL:CR753864 EMBL:BC000361 EMBL:BC013006 EMBL:AF029061
EMBL:AF029062 IPI:IPI00641829 IPI:IPI00848161 PIR:I37201
RefSeq:NP_004631.1 RefSeq:NP_542165.1 UniGene:Hs.254042
UniGene:Hs.730849 PDB:1T5I PDB:1T6N PDB:1XTI PDB:1XTJ PDB:1XTK
PDBsum:1T5I PDBsum:1T6N PDBsum:1XTI PDBsum:1XTJ PDBsum:1XTK
ProteinModelPortal:Q13838 SMR:Q13838 IntAct:Q13838
MINT:MINT-1032422 STRING:Q13838 PhosphoSite:Q13838 DMDM:2500529
PaxDb:Q13838 PRIDE:Q13838 DNASU:7919 Ensembl:ENST00000383508
Ensembl:ENST00000396172 Ensembl:ENST00000400295
Ensembl:ENST00000400296 Ensembl:ENST00000412106
Ensembl:ENST00000412330 Ensembl:ENST00000413678
Ensembl:ENST00000414440 Ensembl:ENST00000415689
Ensembl:ENST00000416863 Ensembl:ENST00000430784
Ensembl:ENST00000431360 Ensembl:ENST00000441425
Ensembl:ENST00000445218 Ensembl:ENST00000448296
Ensembl:ENST00000453138 Ensembl:ENST00000456476
Ensembl:ENST00000456666 Ensembl:ENST00000458640 GeneID:7919
KEGG:hsa:7919 UCSC:uc003ntt.3 GeneCards:GC06M031500 HGNC:HGNC:13917
HPA:CAB034012 MIM:142560 neXtProt:NX_Q13838 PharmGKB:PA25262
InParanoid:Q13838 PhylomeDB:Q13838 ChiTaRS:DDX39B
EvolutionaryTrace:Q13838 GenomeRNAi:7919 NextBio:30405
ArrayExpress:Q13838 Bgee:Q13838 Genevestigator:Q13838
GermOnline:ENSG00000198563 GO:GO:0043008 Uniprot:Q13838
Length = 428
Score = 1391 (494.7 bits), Expect = 2.9e-142, P = 2.9e-142
Identities = 264/354 (74%), Positives = 310/354 (87%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI
Sbjct: 71 VQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQIS 130
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK++
Sbjct: 131 KEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHI 190
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KFMQDPMEI+
Sbjct: 191 KHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIF 250
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE
Sbjct: 251 VDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQ 310
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP+ +DT
Sbjct: 311 NFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDT 370
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
YLHRV RAGRFGTKGLAITFVS +D+ ILN VQ RFEV+I ELP++ID S+Y+
Sbjct: 371 YLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYI 424
>UNIPROTKB|Q29024 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046784 "intronless viral
mRNA export from host nucleus" evidence=IEA] [GO:0043008
"ATP-dependent protein binding" evidence=IEA] [GO:0030621 "U4 snRNA
binding" evidence=IEA] [GO:0017070 "U6 snRNA binding" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0005688 "U6 snRNP" evidence=IEA] [GO:0005687 "U4 snRNP"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000346 "transcription export complex" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0016607
GO:GO:0005681 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000245 GO:GO:0004004 EMBL:AJ251914 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
CTD:7919 KO:K12812 OMA:NAENPAI GO:GO:0000346 GO:GO:0005687
GO:GO:0005688 GO:GO:0030621 GO:GO:0046784 EMBL:Z34846 PIR:I47126
RefSeq:NP_001005157.1 UniGene:Ssc.11719 ProteinModelPortal:Q29024
SMR:Q29024 STRING:Q29024 PRIDE:Q29024 Ensembl:ENSSSCT00000001529
GeneID:448813 KEGG:ssc:448813 ArrayExpress:Q29024 Uniprot:Q29024
Length = 428
Score = 1391 (494.7 bits), Expect = 2.9e-142, P = 2.9e-142
Identities = 264/354 (74%), Positives = 310/354 (87%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI
Sbjct: 71 VQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQIS 130
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK++
Sbjct: 131 KEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHI 190
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KFMQDPMEI+
Sbjct: 191 KHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIF 250
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE
Sbjct: 251 VDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQ 310
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP+ +DT
Sbjct: 311 NFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDT 370
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
YLHRV RAGRFGTKGLAITFVS +D+ ILN VQ RFEV+I ELP++ID S+Y+
Sbjct: 371 YLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYI 424
>MGI|MGI:99240 [details] [associations]
symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=ISO] [GO:0000346 "transcription export complex"
evidence=ISO] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017070 "U6 snRNA binding"
evidence=ISO] [GO:0030621 "U4 snRNA binding" evidence=ISO]
[GO:0043008 "ATP-dependent protein binding" evidence=ISO]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:99240 GO:GO:0005524
GO:GO:0005737 GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501
GO:GO:0017070 HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 CTD:7919 KO:K12812 OMA:NAENPAI
GO:GO:0000346 GO:GO:0005687 GO:GO:0005688 GO:GO:0030621
GO:GO:0046784 EMBL:AF118128 EMBL:AY255786 EMBL:AY255787
EMBL:AC007080 EMBL:AK088867 EMBL:AK051034 EMBL:BC011067
EMBL:BC024859 IPI:IPI00409462 RefSeq:NP_001239386.1
RefSeq:NP_062667.1 UniGene:Mm.439827 ProteinModelPortal:Q9Z1N5
SMR:Q9Z1N5 IntAct:Q9Z1N5 STRING:Q9Z1N5 PhosphoSite:Q9Z1N5
PaxDb:Q9Z1N5 PRIDE:Q9Z1N5 Ensembl:ENSMUST00000068056
Ensembl:ENSMUST00000172549 Ensembl:ENSMUST00000173731 GeneID:53817
KEGG:mmu:53817 InParanoid:Q9Z1N5 NextBio:310679 Bgee:Q9Z1N5
CleanEx:MM_BAT1A Genevestigator:Q9Z1N5 Uniprot:Q9Z1N5
Length = 428
Score = 1391 (494.7 bits), Expect = 2.9e-142, P = 2.9e-142
Identities = 264/354 (74%), Positives = 310/354 (87%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI
Sbjct: 71 VQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQIS 130
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK++
Sbjct: 131 KEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHI 190
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KFMQDPMEI+
Sbjct: 191 KHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIF 250
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE
Sbjct: 251 VDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQ 310
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP+ +DT
Sbjct: 311 NFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDT 370
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
YLHRV RAGRFGTKGLAITFVS +D+ ILN VQ RFEV+I ELP++ID S+Y+
Sbjct: 371 YLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYI 424
>RGD|70923 [details] [associations]
symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B"
species:10116 "Rattus norvegicus" [GO:0000245 "spliceosomal complex
assembly" evidence=IEA;ISO] [GO:0000346 "transcription export
complex" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=IEA;ISO] [GO:0005687 "U4 snRNP" evidence=IEA;ISO]
[GO:0005688 "U6 snRNP" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006406 "mRNA export from nucleus"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=IEA;ISO] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0017070 "U6 snRNA binding"
evidence=IEA;ISO] [GO:0030621 "U4 snRNA binding" evidence=IEA;ISO]
[GO:0043008 "ATP-dependent protein binding" evidence=IEA;ISO]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=IEA;ISO] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:70923 GO:GO:0005524
GO:GO:0005737 GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501
GO:GO:0017070 HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 CTD:7919 KO:K12812 OMA:NAENPAI
GO:GO:0000346 GO:GO:0005687 GO:GO:0005688 GO:GO:0030621
GO:GO:0046784 EMBL:M75168 EMBL:AF387339 EMBL:AJ314857 EMBL:BC080243
IPI:IPI00215291 PIR:A42811 RefSeq:NP_579834.2 UniGene:Rn.202950
ProteinModelPortal:Q63413 SMR:Q63413 STRING:Q63413
World-2DPAGE:0004:Q63413 PRIDE:Q63413 Ensembl:ENSRNOT00000001115
GeneID:114612 KEGG:rno:114612 UCSC:RGD:70923 InParanoid:Q63413
NextBio:618775 ArrayExpress:Q63413 Genevestigator:Q63413
GermOnline:ENSRNOG00000000841 Uniprot:Q63413
Length = 428
Score = 1391 (494.7 bits), Expect = 2.9e-142, P = 2.9e-142
Identities = 264/354 (74%), Positives = 310/354 (87%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI
Sbjct: 71 VQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQIS 130
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK++
Sbjct: 131 KEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHI 190
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KFMQDPMEI+
Sbjct: 191 KHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIF 250
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE
Sbjct: 251 VDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQ 310
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP+ +DT
Sbjct: 311 NFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDT 370
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
YLHRV RAGRFGTKGLAITFVS +D+ ILN VQ RFEV+I ELP++ID S+Y+
Sbjct: 371 YLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYI 424
>ZFIN|ZDB-GENE-040426-2902 [details] [associations]
symbol:ddx39ab "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39Ab" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-040426-2902 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
HOVERGEN:HBG107334 KO:K13182 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 OMA:WANCVIS CTD:7919 EMBL:FP101915
EMBL:BC044169 EMBL:BC067555 EMBL:BC128804 EMBL:BX248081
IPI:IPI00631848 RefSeq:NP_998142.1 UniGene:Dr.75872 SMR:Q803W0
STRING:Q803W0 Ensembl:ENSDART00000019957 GeneID:406249
KEGG:dre:406249 InParanoid:Q803W0 NextBio:20817884 Uniprot:Q803W0
Length = 427
Score = 1391 (494.7 bits), Expect = 2.9e-142, P = 2.9e-142
Identities = 262/354 (74%), Positives = 309/354 (87%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMD++CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI
Sbjct: 70 VQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTRELAFQIS 129
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS Y+P +KVAVF+GG++IK +D+LK CP IVVGTPGRILAL R+K L+LKNV
Sbjct: 130 KEYERFSKYMPTVKVAVFFGGMSIKKDEDVLKKSCPHIVVGTPGRILALVRNKTLNLKNV 189
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+HF+LDECDKMLE LDMRRDVQ+IF++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++
Sbjct: 190 KHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVF 249
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
VDDE KLTLHGL Q+Y KL + EKNRKL DLLD L+FNQVVIFVKSV R L++LLVE
Sbjct: 250 VDDETKLTLHGLQQYYCKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCVALSQLLVEQ 309
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DT
Sbjct: 310 NFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDT 369
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
YLHRV RAGRFGTKGLAITFVS +D+ ILN VQ RFEV++ ELPE+ID STY+
Sbjct: 370 YLHRVARAGRFGTKGLAITFVSDETDAKILNDVQDRFEVNVAELPEEIDISTYI 423
>UNIPROTKB|Q3T147 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9913 "Bos taurus" [GO:0006406 "mRNA export from nucleus"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046784 "intronless viral mRNA export
from host nucleus" evidence=IEA] [GO:0043008 "ATP-dependent protein
binding" evidence=IEA] [GO:0030621 "U4 snRNA binding" evidence=IEA]
[GO:0017070 "U6 snRNA binding" evidence=IEA] [GO:0010501 "RNA
secondary structure unwinding" evidence=IEA] [GO:0005688 "U6 snRNP"
evidence=IEA] [GO:0005687 "U4 snRNP" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0000346 "transcription export
complex" evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0016607 GO:GO:0005681 GO:GO:0006406 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000245
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0010501 GO:GO:0017070 HSSP:Q5STU4 HOVERGEN:HBG107334
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 EMBL:BC102131
IPI:IPI00690141 RefSeq:NP_001028801.1 UniGene:Bt.4945
ProteinModelPortal:Q3T147 SMR:Q3T147 STRING:Q3T147 PRIDE:Q3T147
Ensembl:ENSBTAT00000029090 GeneID:540191 KEGG:bta:540191 CTD:7919
InParanoid:Q3T147 KO:K12812 OMA:NAENPAI NextBio:20878478
ArrayExpress:Q3T147 GO:GO:0000346 GO:GO:0005687 GO:GO:0005688
GO:GO:0030621 GO:GO:0046784 Uniprot:Q3T147
Length = 428
Score = 1390 (494.4 bits), Expect = 3.7e-142, P = 3.7e-142
Identities = 264/354 (74%), Positives = 309/354 (87%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI
Sbjct: 71 VQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQIS 130
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS Y+P +KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK++
Sbjct: 131 KEYERFSKYMPSVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHI 190
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KFMQDPMEI+
Sbjct: 191 KHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIF 250
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE
Sbjct: 251 VDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQ 310
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP+ +DT
Sbjct: 311 NFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDT 370
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
YLHRV RAGRFGTKGLAITFVS +D+ ILN VQ RFEV+I ELP++ID S+Y+
Sbjct: 371 YLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYI 424
>UNIPROTKB|E2QY95 [details] [associations]
symbol:DDX39A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006406 "mRNA export from nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:10212
KO:K13182 GeneTree:ENSGT00660000095549 OMA:WANCVIS
EMBL:AAEX03012368 RefSeq:XP_533895.2 Ensembl:ENSCAFT00000025943
GeneID:476689 KEGG:cfa:476689 NextBio:20852303 Uniprot:E2QY95
Length = 427
Score = 1390 (494.4 bits), Expect = 3.7e-142, P = 3.7e-142
Identities = 261/354 (73%), Positives = 309/354 (87%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTRELA+QI
Sbjct: 70 VQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQIS 129
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS Y+P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++ L+LKNV
Sbjct: 130 KEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSLNLKNV 189
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++
Sbjct: 190 KHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVF 249
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE
Sbjct: 250 VDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQ 309
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DT
Sbjct: 310 NFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDT 369
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
YLHRV RAGRFGTKGLAITFVS +D+ ILN VQ RFEV++ ELPE+ID STY+
Sbjct: 370 YLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDISTYI 423
>UNIPROTKB|F1SCH3 [details] [associations]
symbol:DDX39A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095549 OMA:WANCVIS EMBL:FP103015
Ensembl:ENSSSCT00000015052 Uniprot:F1SCH3
Length = 475
Score = 1390 (494.4 bits), Expect = 3.7e-142, P = 3.7e-142
Identities = 261/354 (73%), Positives = 309/354 (87%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTRELA+QI
Sbjct: 118 VQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQIS 177
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS Y+P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++ L+LKNV
Sbjct: 178 KEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSLNLKNV 237
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++
Sbjct: 238 KHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVF 297
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE
Sbjct: 298 VDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQ 357
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DT
Sbjct: 358 NFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDT 417
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
YLHRV RAGRFGTKGLAITFVS +D+ ILN VQ RFEV++ ELPE+ID STY+
Sbjct: 418 YLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDISTYI 471
>UNIPROTKB|Q5ZHZ0 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334
EMBL:AJ720994 IPI:IPI00585240 ProteinModelPortal:Q5ZHZ0 SMR:Q5ZHZ0
Uniprot:Q5ZHZ0
Length = 428
Score = 1386 (493.0 bits), Expect = 9.9e-142, P = 9.9e-142
Identities = 263/354 (74%), Positives = 308/354 (87%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI
Sbjct: 71 VQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQIS 130
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS Y+P +KVAVF+GG+ +K +++LK CP IVVGTPGRILALAR+K L+LK++
Sbjct: 131 KEYERFSKYMPSVKVAVFFGGLAVKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHI 190
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KFMQDPMEI+
Sbjct: 191 KHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIF 250
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE
Sbjct: 251 VDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQ 310
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP+ +DT
Sbjct: 311 NFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDT 370
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
YLHRV RAGRFGTKGLAITFVS +D+ ILN VQ RFEV+I ELP++ID S+Y+
Sbjct: 371 YLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYI 424
>UNIPROTKB|Q5E970 [details] [associations]
symbol:DDX39 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39
isoform 1" species:9913 "Bos taurus" [GO:0006406 "mRNA export from
nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 CTD:10212 HOVERGEN:HBG107334
KO:K13182 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
OMA:WANCVIS EMBL:DAAA02019335 EMBL:BT021050 IPI:IPI00700228
RefSeq:NP_001029924.1 UniGene:Bt.29896 SMR:Q5E970 STRING:Q5E970
Ensembl:ENSBTAT00000029088 GeneID:614215 KEGG:bta:614215
InParanoid:Q5E970 NextBio:20899000 Uniprot:Q5E970
Length = 427
Score = 1385 (492.6 bits), Expect = 1.3e-141, P = 1.3e-141
Identities = 258/354 (72%), Positives = 309/354 (87%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMD++CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTRELA+QI
Sbjct: 70 VQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQIS 129
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS Y+P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++ L+L+NV
Sbjct: 130 KEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKRNCPHVVVGTPGRILALVRNRSLNLRNV 189
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++
Sbjct: 190 KHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVF 249
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE
Sbjct: 250 VDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQ 309
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DT
Sbjct: 310 NFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDT 369
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
YLHRV RAGRFGTKGLA+TFVS +D+ ILN VQ RFEV++ ELPE+ID STY+
Sbjct: 370 YLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELPEEIDISTYI 423
>UNIPROTKB|O00148 [details] [associations]
symbol:DDX39A "ATP-dependent RNA helicase DDX39A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006406 "mRNA export from
nucleus" evidence=IGI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:U90426 EMBL:AK026614 EMBL:BC001009
IPI:IPI00940237 RefSeq:NP_005795.2 UniGene:Hs.311609
ProteinModelPortal:O00148 SMR:O00148 IntAct:O00148
MINT:MINT-1035991 STRING:O00148 PhosphoSite:O00148 PaxDb:O00148
PeptideAtlas:O00148 PRIDE:O00148 DNASU:10212
Ensembl:ENST00000242776 GeneID:10212 KEGG:hsa:10212 UCSC:uc002myo.3
CTD:10212 GeneCards:GC19M014521 HGNC:HGNC:17821 neXtProt:NX_O00148
PharmGKB:PA27226 HOVERGEN:HBG107334 InParanoid:O00148 KO:K13182
OrthoDB:EOG4XSKPX PhylomeDB:O00148 ChiTaRS:DDX39A GenomeRNAi:10212
NextBio:38664 ArrayExpress:O00148 Bgee:O00148 CleanEx:HS_DDX39
Genevestigator:O00148 GermOnline:ENSG00000123136 Uniprot:O00148
Length = 427
Score = 1385 (492.6 bits), Expect = 1.3e-141, P = 1.3e-141
Identities = 259/354 (73%), Positives = 308/354 (87%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTRELA+QI
Sbjct: 70 VQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQIS 129
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS Y+P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++ SLKNV
Sbjct: 130 KEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNV 189
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSK+IRPVC+KFMQDPME++
Sbjct: 190 KHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVF 249
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQV+IFVKSV R L +LLVE
Sbjct: 250 VDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRCMALAQLLVEQ 309
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DT
Sbjct: 310 NFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDT 369
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
YLHRV RAGRFGTKGLAITFVS +D+ ILN VQ RFEV++ ELPE+ID STY+
Sbjct: 370 YLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDISTYI 423
>MGI|MGI:1915528 [details] [associations]
symbol:Ddx39 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915528 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003676 GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334 KO:K13182
OrthoDB:EOG4XSKPX EMBL:AK088894 EMBL:AK145927 EMBL:AK146294
EMBL:AK150997 EMBL:AK162752 EMBL:AK168079 EMBL:BC020134
IPI:IPI00123878 IPI:IPI00553461 RefSeq:NP_932099.2 UniGene:Mm.28222
ProteinModelPortal:Q8VDW0 SMR:Q8VDW0 STRING:Q8VDW0
PhosphoSite:Q8VDW0 PaxDb:Q8VDW0 PRIDE:Q8VDW0
Ensembl:ENSMUST00000019576 Ensembl:ENSMUST00000109810
Ensembl:ENSMUST00000172396 GeneID:68278 KEGG:mmu:68278
UCSC:uc008chc.2 CTD:68278 GeneTree:ENSGT00660000095549
InParanoid:Q8VDW0 OMA:WANCVIS NextBio:326910 Bgee:Q8VDW0
CleanEx:MM_DDX39 Genevestigator:Q8VDW0
GermOnline:ENSMUSG00000005481 Uniprot:Q8VDW0
Length = 427
Score = 1385 (492.6 bits), Expect = 1.3e-141, P = 1.3e-141
Identities = 259/354 (73%), Positives = 308/354 (87%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI
Sbjct: 70 VQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVSVLVMCHTRELAFQIS 129
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS Y+P +KV+VF+GG++IK +D+LK CP +VVGTPGRILAL R + L+L+NV
Sbjct: 130 KEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSRSLNLRNV 189
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++
Sbjct: 190 KHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVF 249
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE
Sbjct: 250 VDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQ 309
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DT
Sbjct: 310 NFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDT 369
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
YLHRV RAGRFGTKGLA+TFVS +D+ ILN VQ RFEV++ ELPE+ID STY+
Sbjct: 370 YLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELPEEIDISTYI 423
>RGD|619920 [details] [associations]
symbol:Ddx39a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006406 "mRNA export from nucleus"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 EMBL:AF063447 RGD:619920
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10212 HOVERGEN:HBG107334 KO:K13182
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 OMA:WANCVIS
EMBL:BC086328 IPI:IPI00325144 RefSeq:NP_446015.2 UniGene:Rn.161716
ProteinModelPortal:Q5U216 SMR:Q5U216 STRING:Q5U216 PRIDE:Q5U216
Ensembl:ENSRNOT00000045974 GeneID:89827 KEGG:rno:89827
InParanoid:Q5U216 NextBio:617744 Genevestigator:Q5U216
GermOnline:ENSRNOG00000004373 Uniprot:Q5U216
Length = 427
Score = 1385 (492.6 bits), Expect = 1.3e-141, P = 1.3e-141
Identities = 259/354 (73%), Positives = 308/354 (87%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI
Sbjct: 70 VQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPINGQVSVLVMCHTRELAFQIS 129
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS Y+P +KV+VF+GG++IK +D+LK CP +VVGTPGRILAL R + L+L+NV
Sbjct: 130 KEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSRSLNLRNV 189
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++
Sbjct: 190 KHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVF 249
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE
Sbjct: 250 VDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQ 309
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DT
Sbjct: 310 NFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDT 369
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
YLHRV RAGRFGTKGLA+TFVS +D+ ILN VQ RFEV++ ELPE+ID STY+
Sbjct: 370 YLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELPEEIDISTYI 423
>ZFIN|ZDB-GENE-030131-4275 [details] [associations]
symbol:ddx39aa "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39Aa" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-4275 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334 EMBL:BC071505
IPI:IPI00510085 UniGene:Dr.1111 ProteinModelPortal:Q6IQA5
SMR:Q6IQA5 STRING:Q6IQA5 PRIDE:Q6IQA5 InParanoid:Q6IQA5
ArrayExpress:Q6IQA5 Bgee:Q6IQA5 Uniprot:Q6IQA5
Length = 427
Score = 1373 (488.4 bits), Expect = 2.4e-140, P = 2.4e-140
Identities = 257/354 (72%), Positives = 307/354 (86%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMD++CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI
Sbjct: 70 VQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTRELAFQIS 129
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS Y+ +K A F+GG++IK +D+LK CP IVVGTPGRILAL+R+K L+LKNV
Sbjct: 130 KEYERFSKYMSSVKCAAFFGGMSIKKDEDVLKKNCPHIVVGTPGRILALSRNKTLTLKNV 189
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+HF+LDECDKMLE LDMRRDVQ+IF++TPH+KQ MMFSATLSKEIRPVC+KFMQDPME++
Sbjct: 190 KHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVF 249
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L++LLVE
Sbjct: 250 VDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVPRCVALSQLLVEQ 309
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DT
Sbjct: 310 NFPAIAIHRGMTQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDT 369
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
YLHRV RAGRFGTKGLA+ FVS +D+ ILN VQ RFEV++ ELPE+ID STY+
Sbjct: 370 YLHRVARAGRFGTKGLAVIFVSDETDAKILNDVQDRFEVNVAELPEEIDISTYI 423
>ZFIN|ZDB-GENE-040426-1259 [details] [associations]
symbol:ddx39b "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39B" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-040426-1259 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX511233
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOVERGEN:HBG107334
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 KO:K12812
OMA:NNPLINC EMBL:FP085397 EMBL:BC055240 IPI:IPI00502330
RefSeq:NP_957237.1 UniGene:Dr.5423 SMR:Q7SXU7 STRING:Q7SXU7
Ensembl:ENSDART00000052355 GeneID:393917 KEGG:dre:393917 CTD:393917
InParanoid:Q7SXU7 NextBio:20814893 Uniprot:Q7SXU7
Length = 435
Score = 1365 (485.6 bits), Expect = 1.7e-139, P = 1.7e-139
Identities = 259/354 (73%), Positives = 306/354 (86%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI
Sbjct: 78 VQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQIS 137
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS Y+P +KVAVF+GG++IK +++LK E P +VVGTPGRILAL+R+K L+L+++
Sbjct: 138 KEYERFSKYMPSVKVAVFFGGLSIKKDEEVLKKESPHVVVGTPGRILALSRNKSLNLRHI 197
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KFMQDPMEI+
Sbjct: 198 KHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIF 257
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE
Sbjct: 258 VDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQ 317
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
NFP+I IH M Q+ERL RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP+ +DT
Sbjct: 318 NFPAIAIHRAMPQDERLARYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDT 377
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
YLHRV RAGRFGTKGLAITFVS +D+ LN VQ RFEV+I ELPE+ID S+Y+
Sbjct: 378 YLHRVARAGRFGTKGLAITFVSDENDARTLNDVQDRFEVNISELPEEIDISSYI 431
>UNIPROTKB|F8VQ10 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AL662847 EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:NAENPAI EMBL:BX001040 EMBL:BX248516
EMBL:BX927320 EMBL:CR753820 EMBL:CR753864 HGNC:HGNC:13917
ChiTaRS:DDX39B EMBL:CR942185 IPI:IPI01025218 SMR:F8VQ10
Ensembl:ENST00000417556 Ensembl:ENST00000547039
Ensembl:ENST00000547489 Ensembl:ENST00000548340
Ensembl:ENST00000548614 Ensembl:ENST00000550217
Ensembl:ENST00000552288 Uniprot:F8VQ10
Length = 443
Score = 1354 (481.7 bits), Expect = 2.4e-138, P = 2.4e-138
Identities = 264/369 (71%), Positives = 310/369 (84%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQV---------------T 45
+QHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV +
Sbjct: 71 VQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVYLGRVLGRGFWCVFVS 130
Query: 46 ALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGR 105
LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGR
Sbjct: 131 VLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGR 190
Query: 106 ILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEI 165
ILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEI
Sbjct: 191 ILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEI 250
Query: 166 RPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVK 225
RPVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVK
Sbjct: 251 RPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVK 310
Query: 226 SVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIER 285
SV R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIER
Sbjct: 311 SVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIER 370
Query: 286 VNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELP 345
VNI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN VQ RFEV+I ELP
Sbjct: 371 VNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 430
Query: 346 EQIDTSTYM 354
++ID S+Y+
Sbjct: 431 DEIDISSYI 439
>POMBASE|SPAC17G6.14c [details] [associations]
symbol:uap56 "ATP-dependent RNA helicase Uap56"
species:4896 "Schizosaccharomyces pombe" [GO:0000346 "transcription
export complex" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISO]
[GO:0006406 "mRNA export from nucleus" evidence=ISO] [GO:0008380
"RNA splicing" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC17G6.14c GO:GO:0005524 EMBL:CU329670
GO:GO:0008380 GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K12812 GO:GO:0000346
OrthoDB:EOG4H49C6 EMBL:D89270 PIR:T37846 PIR:T43199
RefSeq:NP_594261.1 ProteinModelPortal:O13792 SMR:O13792
STRING:O13792 EnsemblFungi:SPAC17G6.14c.1 GeneID:2542433
KEGG:spo:SPAC17G6.14c OMA:DAVEFNQ NextBio:20803490 Uniprot:O13792
Length = 434
Score = 1351 (480.6 bits), Expect = 5.1e-138, P = 5.1e-138
Identities = 256/356 (71%), Positives = 303/356 (85%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q CIPQ+ILG DV+CQAKSGMGKTAVFVLSTLQQ EP G+V+ LVLCHTRELA+QI
Sbjct: 77 VQQVCIPQSILGTDVLCQAKSGMGKTAVFVLSTLQQIEPVDGEVSVLVLCHTRELAFQIK 136
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNEC--PQIVVGTPGRILALARDKDLSLK 118
+E+ RFS YLPD++ AVFYGG+NIK + K++ P IVV TPGR+ AL R+K L +
Sbjct: 137 NEYARFSKYLPDVRTAVFYGGINIKQDMEAFKDKSKSPHIVVATPGRLNALVREKILKVN 196
Query: 119 NVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPME 178
+V+HF+LDECDK+LES+DMRRD+QE+F+ TP KQVMMFSATLS EIRP+CKKFMQ+P+E
Sbjct: 197 SVKHFVLDECDKLLESVDMRRDIQEVFRATPPQKQVMMFSATLSNEIRPICKKFMQNPLE 256
Query: 179 IYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
IYVDDE KLTLHGL QHY+KL E KNRK+NDLLD+L+FNQVVIFVKSVSRA EL++LL
Sbjct: 257 IYVDDETKLTLHGLQQHYVKLEEKAKNRKINDLLDSLEFNQVVIFVKSVSRANELDRLLR 316
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
ECNFPSICIH G+ QEER+ RYK FK+ +KRI VATD+ GRGIDIERVNIVINYDMPDS
Sbjct: 317 ECNFPSICIHGGLPQEERIKRYKAFKDFDKRICVATDVFGRGIDIERVNIVINYDMPDSP 376
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
D+YLHRVGRAGRFGTKGLAITF SS DS IL+++Q RFEV+I ELP++ID +YM
Sbjct: 377 DSYLHRVGRAGRFGTKGLAITFSSSEEDSQILDKIQERFEVNITELPDEIDVGSYM 432
>FB|FBgn0014189 [details] [associations]
symbol:Hel25E "Helicase at 25E" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IC;NAS;IDA]
[GO:0006338 "chromatin remodeling" evidence=IMP] [GO:0005700
"polytene chromosome" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS;NAS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0006406 "mRNA export from nucleus" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005875 GO:GO:0007052
EMBL:AE014134 GO:GO:0016607 GO:GO:0005681 GO:GO:0003723
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095549
KO:K12812 EMBL:X79802 EMBL:L06018 EMBL:AY118921 PIR:S51601
RefSeq:NP_723089.1 RefSeq:NP_723090.1 RefSeq:NP_723091.1
UniGene:Dm.3332 ProteinModelPortal:Q27268 SMR:Q27268 DIP:DIP-20199N
IntAct:Q27268 MINT:MINT-304772 STRING:Q27268 PaxDb:Q27268
PRIDE:Q27268 EnsemblMetazoa:FBtr0079123 EnsemblMetazoa:FBtr0079124
EnsemblMetazoa:FBtr0079125 GeneID:33781 KEGG:dme:Dmel_CG7269
CTD:33781 FlyBase:FBgn0014189 InParanoid:Q27268 OMA:ENRFLEE
OrthoDB:EOG47WM45 PhylomeDB:Q27268 GenomeRNAi:33781 NextBio:785218
Bgee:Q27268 GermOnline:CG7269 Uniprot:Q27268
Length = 424
Score = 1338 (476.1 bits), Expect = 1.2e-136, P = 1.2e-136
Identities = 256/355 (72%), Positives = 302/355 (85%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVT-ALVLCHTRELAYQI 59
+QHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ EP+ LV+CHTRELA+QI
Sbjct: 67 VQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTRELAFQI 126
Query: 60 CHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKN 119
E+ERFS Y+P +KVAVF+GG+ I+ ++ LK+ P IVVGTPGRILAL R+K L+LK
Sbjct: 127 SKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVVGTPGRILALIRNKKLNLKL 186
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
++HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATLSK+IRPVCKKFMQDPME+
Sbjct: 187 LKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQDPMEV 246
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
YVDDEAKLTLHGL QHY+ L E EKN+KL +LLD L+FNQVVIFVKSV R L++LL E
Sbjct: 247 YVDDEAKLTLHGLQQHYVNLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVALSQLLTE 306
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
NFP+I IH GM+QEERL RY+ FK+ KRILVAT+L GRG+DIERVNIV NYDMP+ +D
Sbjct: 307 QNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSD 366
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
TYLHRV RAGRFGTKGLAITFVS +D+ ILN+VQ RF+V+I ELPE+ID STY+
Sbjct: 367 TYLHRVARAGRFGTKGLAITFVSDENDAKILNEVQDRFDVNISELPEEIDLSTYI 421
>WB|WBGene00001840 [details] [associations]
symbol:hel-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0001703 "gastrulation with mouth
forming first" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0008380
GO:GO:0006397 GO:GO:0010171 GO:GO:0005681 GO:GO:0003723
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095549 OMA:NAENPAI EMBL:Z54327 EMBL:U08102
PIR:T19484 RefSeq:NP_001021985.1 ProteinModelPortal:Q18212
SMR:Q18212 STRING:Q18212 PaxDb:Q18212 PRIDE:Q18212
EnsemblMetazoa:C26D10.2a.1 EnsemblMetazoa:C26D10.2a.2 GeneID:174333
KEGG:cel:CELE_C26D10.2 UCSC:C26D10.2a CTD:174333 WormBase:C26D10.2a
InParanoid:Q18212 NextBio:883586 ArrayExpress:Q18212 GO:GO:0001703
Uniprot:Q18212
Length = 425
Score = 1319 (469.4 bits), Expect = 1.2e-134, P = 1.2e-134
Identities = 251/354 (70%), Positives = 296/354 (83%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMDV+CQAKSGMGKTAVFV++TLQQ EP G+V+ + +CHTRELA+QI
Sbjct: 67 VQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQIS 126
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS YLP +KVAVF+GG+ IK ++ L N+CP IVVGTPGR+LALAR L L V
Sbjct: 127 KEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKV 186
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
++F+LDECDKM+ DMRRDVQEI KMTP KQVMMFSATL KE+R VCK+FMQDPME+Y
Sbjct: 187 KYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRTVCKRFMQDPMEVY 246
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
VDDEAKLTLHGL QHY+KL E EKNR+L +LLDAL+FNQVVIFVK+V R L++LL E
Sbjct: 247 VDDEAKLTLHGLQQHYVKLKEAEKNRRLLNLLDALEFNQVVIFVKAVKRCEALHQLLTEQ 306
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
NFPSI IH M+QEERL+RY+ FK+ KRILVATDL GRG+DIERVNIV NYDMP+ +D+
Sbjct: 307 NFPSIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDS 366
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
YLHRV RAGRFGTKGLAITFVS +D+ LN VQ RF++ I ELPE+ID STY+
Sbjct: 367 YLHRVARAGRFGTKGLAITFVSDENDAKTLNSVQDRFDISITELPEKIDVSTYI 420
>UNIPROTKB|A4RBS3 [details] [associations]
symbol:SUB2 "ATP-dependent RNA helicase SUB2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM000230 EMBL:CM001237 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12812
RefSeq:XP_003720935.1 ProteinModelPortal:A4RBS3 SMR:A4RBS3
STRING:A4RBS3 PRIDE:A4RBS3 EnsemblFungi:MGG_02806T0 GeneID:2682359
KEGG:mgr:MGG_02806 OrthoDB:EOG4H49C6 Uniprot:A4RBS3
Length = 436
Score = 1259 (448.2 bits), Expect = 2.8e-128, P = 2.8e-128
Identities = 241/359 (67%), Positives = 291/359 (81%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ EP G+ + LV+CHTRELA+QI
Sbjct: 78 VQQTCIPQAMLGGDIICQAKSGLGKTAVFVLTTLQQVEPVAGECSVLVMCHTRELAFQIR 137
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLK 118
+E+ RFS Y+PDIK VF+GG I+ +LLKN+ P I+VGTPGR+ AL RDK L L
Sbjct: 138 NEYNRFSKYMPDIKTGVFFGGTPIQKDAELLKNKETHPHIIVGTPGRLNALVRDKFLRLS 197
Query: 119 NVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPME 178
+VR F+LDECDKML+ +DMRRDVQEIF+ TP KQVMMFSATLS EI+P+CKKFMQ+P E
Sbjct: 198 SVRIFVLDECDKMLDQIDMRRDVQEIFRATPQQKQVMMFSATLSDEIKPICKKFMQNPTE 257
Query: 179 IYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
YVD++ KLTLHGL Q+++ L E EKNRKLN+LLD L FNQV+IFVKS RA EL+KLL
Sbjct: 258 HYVDEDTKLTLHGLQQYFVALEEKEKNRKLNELLDDLQFNQVIIFVKSTLRATELDKLLR 317
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+N+ INYDMP A
Sbjct: 318 ECNFPSIAVHSGVSQEERIRRYKEFKEFNKRICVATDVFGRGIDIERINLAINYDMPADA 377
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ-IDTSTYMPS 356
D+YLHRVGRAGRFGTKGLA++FV++ D ++L ++ RFEV I E P+ ID STYM S
Sbjct: 378 DSYLHRVGRAGRFGTKGLAVSFVTNDQDKEVLTAIEKRFEVPIPEFPKDGIDASTYMAS 436
>DICTYBASE|DDB_G0269932 [details] [associations]
symbol:uap56 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0000348 "mRNA
branch site recognition" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0269932
GO:GO:0005524 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0005681 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12812 GO:GO:0000348 RefSeq:XP_646415.1
ProteinModelPortal:Q55CR6 SMR:Q55CR6 PRIDE:Q55CR6
EnsemblProtists:DDB0233387 GeneID:8617372 KEGG:ddi:DDB_G0269932
InParanoid:Q55CR6 OMA:GGANMNP ProtClustDB:CLSZ2429041
Uniprot:Q55CR6
Length = 428
Score = 1246 (443.7 bits), Expect = 6.8e-127, P = 6.8e-127
Identities = 237/354 (66%), Positives = 291/354 (82%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q+ECIPQAILG DVICQAKSGMGKTAVFVLSTLQQ + NP +T LVLC+TRELAYQIC
Sbjct: 74 VQNECIPQAILGTDVICQAKSGMGKTAVFVLSTLQQIDNNPNGITTLVLCNTRELAYQIC 133
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
EF+RF+ YLP++K AV YGG+ ++ HKDL+K + P I++GTPGRIL LA + LSLK +
Sbjct: 134 DEFDRFTKYLPNVKTAVIYGGIPVQTHKDLIKEKKPNIIIGTPGRILQLASEGALSLKEI 193
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ FILDECD MLESLDMR+DVQ+IFK+ P +KQVMMFSATLS IRP+CKKFM +P+EIY
Sbjct: 194 KQFILDECDTMLESLDMRKDVQKIFKLIPANKQVMMFSATLSDTIRPICKKFMNNPLEIY 253
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
++D +KLTLHGL Q+Y+ ++E +KN+KL +LLD+LDFNQ VIFVKSV RA LNK+L +
Sbjct: 254 INDGSKLTLHGLQQYYVPITEEQKNKKLIELLDSLDFNQAVIFVKSVRRADALNKILQDI 313
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
FPSICIH + Q++R+ +Y+ FK RI+VAT++ GRGIDIERVN+VINYDM +SADT
Sbjct: 314 GFPSICIHRDLDQKDRIEQYRKFKNFESRIMVATNIFGRGIDIERVNVVINYDMAESADT 373
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
YLHRVGRAGRFGTKGLAI+FV S D +L QVQ++F V IKEL D STYM
Sbjct: 374 YLHRVGRAGRFGTKGLAISFVPSKEDP-VLEQVQSKFVVSIKELVATPDPSTYM 426
>UNIPROTKB|H0Y7G4 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CT009531
Ensembl:ENST00000420337 Ensembl:ENST00000426766
Ensembl:ENST00000448800 Uniprot:H0Y7G4
Length = 328
Score = 1236 (440.2 bits), Expect = 7.8e-126, P = 7.8e-126
Identities = 235/323 (72%), Positives = 279/323 (86%)
Query: 32 STLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL 91
+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++L
Sbjct: 2 ATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVL 61
Query: 92 KNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHD 151
K CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+
Sbjct: 62 KKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHE 121
Query: 152 KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDL 211
KQVMMFSATLSKEIRPVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DL
Sbjct: 122 KQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDL 181
Query: 212 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRIL 271
LD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RIL
Sbjct: 182 LDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRIL 241
Query: 272 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILN 331
VAT+L GRG+DIERVNI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN
Sbjct: 242 VATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILN 301
Query: 332 QVQARFEVDIKELPEQIDTSTYM 354
VQ RFEV+I ELP++ID S+Y+
Sbjct: 302 DVQDRFEVNISELPDEIDISSYI 324
>SGD|S000002242 [details] [associations]
symbol:SUB2 "Component of the TREX complex required for
nuclear mRNA export" species:4932 "Saccharomyces cerevisiae"
[GO:0006406 "mRNA export from nucleus" evidence=IMP;IDA;IPI]
[GO:0000346 "transcription export complex" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005681 "spliceosomal
complex" evidence=IEA;TAS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IGI;ISA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IMP] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0000781 "chromosome, telomeric region"
evidence=IPI] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0031124 "mRNA 3'-end processing" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002242 GO:GO:0005524
EMBL:BK006938 GO:GO:0005681 GO:GO:0003723 GO:GO:0006348
GO:GO:0006368 GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000781 GO:GO:0004004
GO:GO:0006283 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0031124
GeneTree:ENSGT00660000095549 KO:K12812 GO:GO:0000346
OrthoDB:EOG4H49C6 EMBL:Z74132 EMBL:AY692907 PIR:S67620
RefSeq:NP_010199.1 ProteinModelPortal:Q07478 SMR:Q07478
DIP:DIP-5343N IntAct:Q07478 MINT:MINT-526164 STRING:Q07478
PaxDb:Q07478 PeptideAtlas:Q07478 EnsemblFungi:YDL084W GeneID:851475
KEGG:sce:YDL084W CYGD:YDL084w OMA:NNPLINC NextBio:968777
Genevestigator:Q07478 GermOnline:YDL084W Uniprot:Q07478
Length = 446
Score = 1219 (434.2 bits), Expect = 4.9e-124, P = 4.9e-124
Identities = 233/357 (65%), Positives = 288/357 (80%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q IPQ+I G DV+CQAKSG+GKTAVFVLSTLQQ +P PG+V +V+C+ RELAYQI
Sbjct: 88 VQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEVAVVVICNARELAYQIR 147
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLK 118
+E+ RFS Y+PD+K AVFYGG I +LLKN+ P IVV TPGR+ AL R+K + L
Sbjct: 148 NEYLRFSKYMPDVKTAVFYGGTPISKDAELLKNKDTAPHIVVATPGRLKALVREKYIDLS 207
Query: 119 NVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPME 178
+V++F++DECDK+LE LDMRRDVQEIF+ TP DKQVMMFSATLS+EIRP+C++F+Q+P+E
Sbjct: 208 HVKNFVIDECDKVLEELDMRRDVQEIFRATPRDKQVMMFSATLSQEIRPICRRFLQNPLE 267
Query: 179 IYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
I+VDDEAKLTLHGL Q+YIKL E EKNRKL LLD L+FNQV+IFVKS +RA EL KLL
Sbjct: 268 IFVDDEAKLTLHGLQQYYIKLEEREKNRKLAQLLDDLEFNQVIIFVKSTTRANELTKLLN 327
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
NFP+I +H M QEER+ RYK FK+ KRI V+TD+ GRGIDIER+N+ INYD+ + A
Sbjct: 328 ASNFPAITVHGHMKQEERIARYKAFKDFEKRICVSTDVFGRGIDIERINLAINYDLTNEA 387
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ-IDTSTYM 354
D YLHRVGRAGRFGTKGLAI+FVSS D ++L ++Q RF+V I E PE+ ID STY+
Sbjct: 388 DQYLHRVGRAGRFGTKGLAISFVSSKEDEEVLAKIQERFDVKIAEFPEEGIDPSTYL 444
>UNIPROTKB|Q5STU3 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AL662847 EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107334 EMBL:BX001040 EMBL:BX248516
EMBL:BX927320 EMBL:CR753820 EMBL:CR753864 UniGene:Hs.254042
UniGene:Hs.730849 HGNC:HGNC:13917 EMBL:CR942185 IPI:IPI00790636
SMR:Q5STU3 STRING:Q5STU3 Ensembl:ENST00000376177
Ensembl:ENST00000400293 Ensembl:ENST00000430703
Ensembl:ENST00000438578 Ensembl:ENST00000446341
Ensembl:ENST00000450987 Ensembl:ENST00000453488 Uniprot:Q5STU3
Length = 425
Score = 1214 (432.4 bits), Expect = 1.7e-123, P = 1.7e-123
Identities = 229/304 (75%), Positives = 268/304 (88%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI
Sbjct: 71 VQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQIS 130
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK++
Sbjct: 131 KEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHI 190
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KFMQDPMEI+
Sbjct: 191 KHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIF 250
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE
Sbjct: 251 VDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQ 310
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP+ +DT
Sbjct: 311 NFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDT 370
Query: 301 YLHR 304
YLHR
Sbjct: 371 YLHR 374
>UNIPROTKB|K9J6N8 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9615 "Canis lupus familiaris" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00660000095549 EMBL:AAEX03008212
Ensembl:ENSCAFT00000000797 Uniprot:K9J6N8
Length = 310
Score = 1185 (422.2 bits), Expect = 2.0e-120, P = 2.0e-120
Identities = 224/306 (73%), Positives = 266/306 (86%)
Query: 49 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA 108
+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILA
Sbjct: 1 MCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILA 60
Query: 109 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 168
LAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPV
Sbjct: 61 LARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPV 120
Query: 169 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS 228
C+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV
Sbjct: 121 CRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQ 180
Query: 229 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 288
R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI
Sbjct: 181 RCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNI 240
Query: 289 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN VQ RFEV+I ELP++I
Sbjct: 241 AFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEI 300
Query: 349 DTSTYM 354
D S+Y+
Sbjct: 301 DISSYI 306
>GENEDB_PFALCIPARUM|PFB0445c [details] [associations]
symbol:PFB0445c "helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AE001362 GenomeReviews:AE001362_GR HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K12812
ProtClustDB:CLSZ2429041 PIR:G71614 RefSeq:XP_001349607.1
ProteinModelPortal:Q9TY94 SMR:Q9TY94 EnsemblProtists:PFB0445c:mRNA
GeneID:812689 KEGG:pfa:PFB0445c EuPathDB:PlasmoDB:PF3D7_0209800
OMA:LECVINY Uniprot:Q9TY94
Length = 457
Score = 1054 (376.1 bits), Expect = 7.5e-120, Sum P(2) = 7.5e-120
Identities = 201/312 (64%), Positives = 250/312 (80%)
Query: 44 VTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE-CPQIVVGT 102
V L L HTRELAYQI +EF+RFS YL +++ V YGG+++ H L K + P I++GT
Sbjct: 144 VRCLGLAHTRELAYQIKNEFDRFSKYLKNVRCEVVYGGISMNKHIKLFKEDNIPHIIIGT 203
Query: 103 PGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLS 162
PGRILAL R+K L ++HF+LDECDK LE LDMR DVQ+IF TP KQVM FSAT++
Sbjct: 204 PGRILALIREKYLITDKIQHFVLDECDKCLEKLDMRSDVQKIFISTPLKKQVMFFSATMA 263
Query: 163 KEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVI 222
KE+R VCKKF+Q+P+EI++DDEAKL LHGL+QHY+KL E +K RKL ++LDAL+FNQV+I
Sbjct: 264 KEMRDVCKKFLQNPVEIFIDDEAKLKLHGLLQHYVKLQEKDKTRKLIEILDALEFNQVII 323
Query: 223 FVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGID 282
FVKSV+RA L+KLL ECNFPSI IH G+ Q+ER+ RY FK+ RILV+TDL GRGID
Sbjct: 324 FVKSVTRAITLDKLLTECNFPSIAIHGGLEQQERIERYDKFKKFENRILVSTDLFGRGID 383
Query: 283 IERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIK 342
IERVNIVINYDMP+++D+YLHRVGRAGRFGTKGLA+TFVSS D+ LN+VQ RFEV I
Sbjct: 384 IERVNIVINYDMPENSDSYLHRVGRAGRFGTKGLAVTFVSSQEDTLALNEVQTRFEVAIS 443
Query: 343 ELPEQIDTSTYM 354
E+P +ID + Y+
Sbjct: 444 EMPNKIDCNEYI 455
Score = 146 (56.5 bits), Expect = 7.5e-120, Sum P(2) = 7.5e-120
Identities = 29/43 (67%), Positives = 33/43 (76%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQ 43
+Q E IP AI G D++CQAKSGMGKTAVFVLS LQQ + N Q
Sbjct: 81 VQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQLDTNENQ 123
>UNIPROTKB|Q9TY94 [details] [associations]
symbol:UAP56 "DEAD box helicase, UAP56" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AE001362 GenomeReviews:AE001362_GR HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K12812
ProtClustDB:CLSZ2429041 PIR:G71614 RefSeq:XP_001349607.1
ProteinModelPortal:Q9TY94 SMR:Q9TY94 EnsemblProtists:PFB0445c:mRNA
GeneID:812689 KEGG:pfa:PFB0445c EuPathDB:PlasmoDB:PF3D7_0209800
OMA:LECVINY Uniprot:Q9TY94
Length = 457
Score = 1054 (376.1 bits), Expect = 7.5e-120, Sum P(2) = 7.5e-120
Identities = 201/312 (64%), Positives = 250/312 (80%)
Query: 44 VTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE-CPQIVVGT 102
V L L HTRELAYQI +EF+RFS YL +++ V YGG+++ H L K + P I++GT
Sbjct: 144 VRCLGLAHTRELAYQIKNEFDRFSKYLKNVRCEVVYGGISMNKHIKLFKEDNIPHIIIGT 203
Query: 103 PGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLS 162
PGRILAL R+K L ++HF+LDECDK LE LDMR DVQ+IF TP KQVM FSAT++
Sbjct: 204 PGRILALIREKYLITDKIQHFVLDECDKCLEKLDMRSDVQKIFISTPLKKQVMFFSATMA 263
Query: 163 KEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVI 222
KE+R VCKKF+Q+P+EI++DDEAKL LHGL+QHY+KL E +K RKL ++LDAL+FNQV+I
Sbjct: 264 KEMRDVCKKFLQNPVEIFIDDEAKLKLHGLLQHYVKLQEKDKTRKLIEILDALEFNQVII 323
Query: 223 FVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGID 282
FVKSV+RA L+KLL ECNFPSI IH G+ Q+ER+ RY FK+ RILV+TDL GRGID
Sbjct: 324 FVKSVTRAITLDKLLTECNFPSIAIHGGLEQQERIERYDKFKKFENRILVSTDLFGRGID 383
Query: 283 IERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIK 342
IERVNIVINYDMP+++D+YLHRVGRAGRFGTKGLA+TFVSS D+ LN+VQ RFEV I
Sbjct: 384 IERVNIVINYDMPENSDSYLHRVGRAGRFGTKGLAVTFVSSQEDTLALNEVQTRFEVAIS 443
Query: 343 ELPEQIDTSTYM 354
E+P +ID + Y+
Sbjct: 444 EMPNKIDCNEYI 455
Score = 146 (56.5 bits), Expect = 7.5e-120, Sum P(2) = 7.5e-120
Identities = 29/43 (67%), Positives = 33/43 (76%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQ 43
+Q E IP AI G D++CQAKSGMGKTAVFVLS LQQ + N Q
Sbjct: 81 VQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQLDTNENQ 123
>UNIPROTKB|B4DP52 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CH471081
GO:GO:0003676 EMBL:AL662847 EMBL:AL662801 EMBL:CR753892
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 HOVERGEN:HBG107334 EMBL:BX001040 EMBL:BX248516
EMBL:BX927320 EMBL:CR753820 EMBL:CR753864 UniGene:Hs.254042
UniGene:Hs.730849 HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CR942185
EMBL:AK298194 IPI:IPI00792043 SMR:B4DP52 STRING:B4DP52
Ensembl:ENST00000415382 Ensembl:ENST00000548499
Ensembl:ENST00000548770 Ensembl:ENST00000549326
Ensembl:ENST00000549433 Ensembl:ENST00000551056
Ensembl:ENST00000552079 UCSC:uc011dnn.2 Uniprot:B4DP52
Length = 350
Score = 1086 (387.4 bits), Expect = 6.1e-110, P = 6.1e-110
Identities = 208/281 (74%), Positives = 244/281 (86%)
Query: 74 KVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 133
KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE
Sbjct: 66 KVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLE 125
Query: 134 SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLV 193
LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KFMQDPMEI+VDDE KLTLHGL
Sbjct: 126 QLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQ 185
Query: 194 QHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQ 253
Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM Q
Sbjct: 186 QYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQ 245
Query: 254 EERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGT 313
EERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP+ +DTYLHRV RAGRFGT
Sbjct: 246 EERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGT 305
Query: 314 KGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
KGLAITFVS +D+ ILN VQ RFEV+I ELP++ID S+Y+
Sbjct: 306 KGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYI 346
>UNIPROTKB|H0Y7X6 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CT009531
ProteinModelPortal:H0Y7X6 PRIDE:H0Y7X6 Ensembl:ENST00000437943
Bgee:H0Y7X6 Uniprot:H0Y7X6
Length = 325
Score = 1059 (377.8 bits), Expect = 4.4e-107, P = 4.4e-107
Identities = 200/273 (73%), Positives = 237/273 (86%)
Query: 32 STLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL 91
+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++L
Sbjct: 2 ATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVL 61
Query: 92 KNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHD 151
K CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+
Sbjct: 62 KKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHE 121
Query: 152 KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDL 211
KQVMMFSATLSKEIRPVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DL
Sbjct: 122 KQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDL 181
Query: 212 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRIL 271
LD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RIL
Sbjct: 182 LDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRIL 241
Query: 272 VATDLVGRGIDIERVNIVINYDMPDSADTYLHR 304
VAT+L GRG+DIERVNI NYDMP+ +DTYLHR
Sbjct: 242 VATNLFGRGMDIERVNIAFNYDMPEDSDTYLHR 274
>UNIPROTKB|F8VZL8 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 EMBL:AL662847
EMBL:CR753892 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 EMBL:BX001040
EMBL:BX248516 EMBL:BX927320 EMBL:CR753820 EMBL:CR753864
HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CR942185 IPI:IPI00643815
SMR:F8VZL8 Ensembl:ENST00000546633 Ensembl:ENST00000546637
Ensembl:ENST00000548331 Ensembl:ENST00000549374
Ensembl:ENST00000550435 Ensembl:ENST00000551031 Uniprot:F8VZL8
Length = 323
Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
Identities = 175/234 (74%), Positives = 206/234 (88%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI
Sbjct: 71 VQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQIS 130
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK++
Sbjct: 131 KEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHI 190
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KFMQDPMEI+
Sbjct: 191 KHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIF 250
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELN 234
VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQ + KSV R + N
Sbjct: 251 VDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQEIT-CKSVQRFSTTN 303
>UNIPROTKB|F6WLT2 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 EMBL:AL662847
EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:BX001040 EMBL:BX248516 EMBL:BX927320 EMBL:CR753820
EMBL:CR753864 HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CR942185
IPI:IPI00643815 SMR:F6WLT2 Ensembl:ENST00000414088
Ensembl:ENST00000417558 Ensembl:ENST00000427214
Ensembl:ENST00000435182 Ensembl:ENST00000438449
Ensembl:ENST00000439927 Ensembl:ENST00000455916 Uniprot:F6WLT2
Length = 289
Score = 915 (327.2 bits), Expect = 8.1e-92, P = 8.1e-92
Identities = 170/219 (77%), Positives = 199/219 (90%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI
Sbjct: 71 VQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQIS 130
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK++
Sbjct: 131 KEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHI 190
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KFMQDPMEI+
Sbjct: 191 KHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIF 250
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQ 219
VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQ
Sbjct: 251 VDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQ 289
>UNIPROTKB|Q8N5M0 [details] [associations]
symbol:DDX39A "ATP-dependent RNA helicase DDX39A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 EMBL:CH471106
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
UniGene:Hs.311609 HGNC:HGNC:17821 ChiTaRS:DDX39A EMBL:AC008569
HOVERGEN:HBG072062 EMBL:BC032128 IPI:IPI00166874 SMR:Q8N5M0
IntAct:Q8N5M0 STRING:Q8N5M0 Ensembl:ENST00000324340 Uniprot:Q8N5M0
Length = 322
Score = 901 (322.2 bits), Expect = 2.5e-90, P = 2.5e-90
Identities = 165/221 (74%), Positives = 196/221 (88%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTRELA+QI
Sbjct: 70 VQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQIS 129
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS Y+P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++ SLKNV
Sbjct: 130 KEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNV 189
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSK+IRPVC+KFMQDPME++
Sbjct: 190 KHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVF 249
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVV 221
VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQ V
Sbjct: 250 VDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQPV 290
>UNIPROTKB|H0Y557 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HGNC:HGNC:13917
ChiTaRS:DDX39B EMBL:CT009531 ProteinModelPortal:H0Y557 PRIDE:H0Y557
Ensembl:ENST00000416325 Bgee:H0Y557 Uniprot:H0Y557
Length = 189
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 141/188 (75%), Positives = 168/188 (89%)
Query: 32 STLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL 91
+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++L
Sbjct: 2 ATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVL 61
Query: 92 KNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHD 151
K CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+
Sbjct: 62 KKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHE 121
Query: 152 KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDL 211
KQVMMFSATLSKEIRPVC+KFMQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DL
Sbjct: 122 KQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDL 181
Query: 212 LDALDFNQ 219
LD L+FNQ
Sbjct: 182 LDVLEFNQ 189
>UNIPROTKB|B1Q2N1 [details] [associations]
symbol:DDX39 "ATP-dependent RNA helicase DDX39A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 UniGene:Hs.311609
HGNC:HGNC:17821 EMBL:AC008569 EMBL:AB254849 IPI:IPI00062206
SMR:B1Q2N1 STRING:B1Q2N1 Ensembl:ENST00000454233
Ensembl:ENST00000588692 UCSC:uc010dzm.1 HOVERGEN:HBG072062
Uniprot:B1Q2N1
Length = 267
Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
Identities = 132/175 (75%), Positives = 157/175 (89%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTRELA+QI
Sbjct: 70 VQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQIS 129
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS Y+P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++ SLKNV
Sbjct: 130 KEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNV 189
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQD 175
+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSK+IRPVC+KFMQD
Sbjct: 190 KHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQD 244
>UNIPROTKB|E9PP12 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS51194 GO:GO:0005524
GO:GO:0003676 EMBL:AL662847 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HGNC:HGNC:13917 ChiTaRS:DDX39B
IPI:IPI00792043 ProteinModelPortal:E9PP12 SMR:E9PP12
Ensembl:ENST00000467694 ArrayExpress:E9PP12 Bgee:E9PP12
Uniprot:E9PP12
Length = 247
Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
Identities = 139/182 (76%), Positives = 160/182 (87%)
Query: 74 KVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 133
KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE
Sbjct: 66 KVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLE 125
Query: 134 SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLV 193
LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KFMQDPMEI+VDDE KLTLHGL
Sbjct: 126 QLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQ 185
Query: 194 QHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQ 253
Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM Q
Sbjct: 186 QYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQ 245
Query: 254 EE 255
EE
Sbjct: 246 EE 247
>UNIPROTKB|K7EQN7 [details] [associations]
symbol:DDX39A "ATP-dependent RNA helicase DDX39A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:17821 EMBL:AC008569
Ensembl:ENST00000589675 Uniprot:K7EQN7
Length = 255
Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
Identities = 132/175 (75%), Positives = 157/175 (89%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTRELA+QI
Sbjct: 81 VQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQIS 140
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS Y+P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++ SLKNV
Sbjct: 141 KEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNV 200
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQD 175
+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSK+IRPVC+KFMQD
Sbjct: 201 KHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQD 255
>UNIPROTKB|F6UJC5 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS51194 GO:GO:0005524
GO:GO:0003676 EMBL:AL662847 EMBL:AL662801 EMBL:CR753892
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:BX001040 EMBL:BX248516 EMBL:BX927320 EMBL:CR753820
EMBL:CR753864 HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CR942185
IPI:IPI00985355 SMR:F6UJC5 Ensembl:ENST00000415390
Ensembl:ENST00000427425 Ensembl:ENST00000427489
Ensembl:ENST00000431908 Ensembl:ENST00000446328
Ensembl:ENST00000448000 Ensembl:ENST00000452792 Uniprot:F6UJC5
Length = 245
Score = 715 (256.8 bits), Expect = 1.3e-70, P = 1.3e-70
Identities = 137/180 (76%), Positives = 158/180 (87%)
Query: 74 KVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 133
KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE
Sbjct: 66 KVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLE 125
Query: 134 SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLV 193
LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KFMQDPMEI+VDDE KLTLHGL
Sbjct: 126 QLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQ 185
Query: 194 QHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQ 253
Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM Q
Sbjct: 186 QYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQ 245
>UNIPROTKB|H0Y800 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS51194 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CT009531
ProteinModelPortal:H0Y800 SMR:H0Y800 PRIDE:H0Y800
Ensembl:ENST00000432549 Bgee:H0Y800 Uniprot:H0Y800
Length = 179
Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
Identities = 136/179 (75%), Positives = 157/179 (87%)
Query: 75 VAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLES 134
VAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE
Sbjct: 1 VAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQ 60
Query: 135 LDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ 194
LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KFMQDPMEI+VDDE KLTLHGL Q
Sbjct: 61 LDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQ 120
Query: 195 HYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQ 253
+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM Q
Sbjct: 121 YYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQ 179
>UNIPROTKB|F6TRA5 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 EMBL:AL662847
EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:BX001040 EMBL:BX248516 EMBL:BX927320 EMBL:CR753820
EMBL:CR753864 HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CR942185
IPI:IPI00796920 SMR:F6TRA5 Ensembl:ENST00000428098
Ensembl:ENST00000438301 Ensembl:ENST00000438433
Ensembl:ENST00000444726 Ensembl:ENST00000446272
Ensembl:ENST00000449100 Ensembl:ENST00000455645 Uniprot:F6TRA5
Length = 238
Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
Identities = 131/168 (77%), Positives = 154/168 (91%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI
Sbjct: 71 VQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQIS 130
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK++
Sbjct: 131 KEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHI 190
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 168
+HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPV
Sbjct: 191 KHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPV 238
>UNIPROTKB|F6UN21 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 EMBL:AL662847
EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:BX001040 EMBL:BX248516 EMBL:BX927320 EMBL:CR753820
EMBL:CR753864 HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CR942185
IPI:IPI00642800 SMR:F6UN21 Ensembl:ENST00000416969
Ensembl:ENST00000419338 Ensembl:ENST00000420958
Ensembl:ENST00000436919 Ensembl:ENST00000436995
Ensembl:ENST00000446909 Ensembl:ENST00000449863 Uniprot:F6UN21
Length = 236
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 129/166 (77%), Positives = 152/166 (91%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI
Sbjct: 71 VQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQIS 130
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK++
Sbjct: 131 KEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHI 190
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 166
+HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIR
Sbjct: 191 KHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR 236
>UNIPROTKB|F6S4E6 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 EMBL:AL662847
EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:BX001040 EMBL:BX248516 EMBL:BX927320 EMBL:CR753820
EMBL:CR753864 HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CR942185
IPI:IPI00641634 SMR:F6S4E6 Ensembl:ENST00000415027
Ensembl:ENST00000432189 Ensembl:ENST00000444267
Ensembl:ENST00000444480 Ensembl:ENST00000451051
Ensembl:ENST00000452908 Ensembl:ENST00000456662 Uniprot:F6S4E6
Length = 231
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 124/161 (77%), Positives = 147/161 (91%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI
Sbjct: 71 VQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQIS 130
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK++
Sbjct: 131 KEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHI 190
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 161
+HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATL
Sbjct: 191 KHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATL 231
>UNIPROTKB|H0Y400 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0004386 EMBL:AL662847 EMBL:AL662801
EMBL:CR753892 EMBL:BX001040 EMBL:BX248516 EMBL:BX927320
EMBL:CR753820 EMBL:CR753864 HGNC:HGNC:13917 ChiTaRS:DDX39B
EMBL:CR942185 EMBL:CT009531 Ensembl:ENST00000412386
Ensembl:ENST00000417023 Ensembl:ENST00000417995
Ensembl:ENST00000422243 Ensembl:ENST00000428107
Ensembl:ENST00000433293 Ensembl:ENST00000445602
Ensembl:ENST00000455400 Uniprot:H0Y400
Length = 187
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 127/178 (71%), Positives = 148/178 (83%)
Query: 176 PMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNK 235
PMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +
Sbjct: 10 PMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQ 69
Query: 236 LLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMP 295
LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP
Sbjct: 70 LLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMP 129
Query: 296 DSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTY 353
+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN VQ RFEV+I ELP++ID S+Y
Sbjct: 130 EDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSY 187
>UNIPROTKB|F8W0J0 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0004386 HGNC:HGNC:13917 ChiTaRS:DDX39B
EMBL:CT009531 IPI:IPI00893580 ProteinModelPortal:F8W0J0 SMR:F8W0J0
Ensembl:ENST00000552820 ArrayExpress:F8W0J0 Uniprot:F8W0J0
Length = 183
Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
Identities = 126/179 (70%), Positives = 148/179 (82%)
Query: 177 MEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKL 236
MEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +L
Sbjct: 1 MEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQL 60
Query: 237 LVECNFPSICIHSGMSQEER-LTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMP 295
LVE NFP+I IH GM QEER L+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP
Sbjct: 61 LVEQNFPAIAIHRGMPQEERWLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMP 120
Query: 296 DSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN VQ RFEV+I ELP++ID S+Y+
Sbjct: 121 EDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYI 179
>SGD|S000002319 [details] [associations]
symbol:DHH1 "Cytoplasmic DExD/H-box helicase, stimulates mRNA
decapping" species:4932 "Saccharomyces cerevisiae" [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0034063 "stress granule assembly"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0000290
"deadenylation-dependent decapping of nuclear-transcribed mRNA"
evidence=IMP] [GO:0003724 "RNA helicase activity" evidence=IGI;ISS]
[GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IGI;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002319 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 EMBL:BK006938 GO:GO:0003723
GO:GO:0000753 GO:GO:0000932 EMBL:Z67750 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0033962 GO:GO:0034063 GO:GO:0008026 eggNOG:COG0513
GeneTree:ENSGT00530000063986 HOGENOM:HOG000268797 KO:K12614
OMA:YSHARMK GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000290 OrthoDB:EOG4QJVWF EMBL:X66057 EMBL:Z74208 PIR:S31229
RefSeq:NP_010121.1 PDB:1S2M PDBsum:1S2M ProteinModelPortal:P39517
SMR:P39517 DIP:DIP-1243N IntAct:P39517 MINT:MINT-385061
STRING:P39517 PaxDb:P39517 PeptideAtlas:P39517 EnsemblFungi:YDL160C
GeneID:851394 KEGG:sce:YDL160C CYGD:YDL160c
EvolutionaryTrace:P39517 NextBio:968552 Genevestigator:P39517
GermOnline:YDL160C Uniprot:P39517
Length = 506
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 139/355 (39%), Positives = 204/355 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP AI G D++ +AK+G GKTA FV+ TL++ +P ++ AL++ TRELA Q
Sbjct: 72 IQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTS 131
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKN 119
+ I V GG N++ D+L+ NE I+VGTPGR+L LA K L +
Sbjct: 132 QVVRTLGKHC-GISCMVTTGGTNLR--DDILRLNETVHILVGTPGRVLDLASRKVADLSD 188
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
FI+DE DKML S D + +++I P Q ++FSAT ++ K + P EI
Sbjct: 189 CSLFIMDEADKML-SRDFKTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVKHLHKPYEI 247
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
+ +E LTL G+ Q+Y + E +K LN L L NQ +IF S +R L K + +
Sbjct: 248 NLMEE--LTLKGITQYYAFVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITD 305
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+ H+ M Q+ER + F++G R LV +DL+ RGIDI+ VN+VIN+D P +A+
Sbjct: 306 LGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAE 365
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
TYLHR+GR+GRFG GLAI ++ +D L +++ +I +P ID S Y+
Sbjct: 366 TYLHRIGRSGRFGHLGLAINLINW-NDRFNLYKIEQELGTEIAAIPATIDKSLYV 419
>FB|FBgn0001942 [details] [associations]
symbol:eIF-4a "Eukaryotic initiation factor 4a" species:7227
"Drosophila melanogaster" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0006413 "translational initiation"
evidence=ISS;NAS] [GO:0016281 "eukaryotic translation initiation
factor 4F complex" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS;NAS] [GO:0005829 "cytosol"
evidence=ISS;NAS] [GO:0017116 "single-stranded DNA-dependent
ATP-dependent DNA helicase activity" evidence=NAS] [GO:0006268 "DNA
unwinding involved in replication" evidence=NAS] [GO:0000339 "RNA
cap binding" evidence=NAS] [GO:0003729 "mRNA binding" evidence=NAS]
[GO:0007446 "imaginal disc growth" evidence=TAS] [GO:0002168
"instar larval development" evidence=TAS] [GO:0009950
"dorsal/ventral axis specification" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC] [GO:0000022 "mitotic spindle elongation" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0048132 "female germ-line stem
cell division" evidence=IGI;IMP] [GO:0030718 "germ-line stem cell
maintenance" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0005875 GO:GO:0007067 EMBL:AE014134
GO:GO:0051297 GO:GO:0016281 GO:GO:0006974 GO:GO:0003743
GO:GO:0030718 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000022 GO:GO:0072686 GO:GO:0048132 GO:GO:0002168
GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0007446
GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ EMBL:X69045
EMBL:AF145621 EMBL:AY069283 EMBL:AY121623 PIR:S30278
RefSeq:NP_001245907.1 RefSeq:NP_476595.1 RefSeq:NP_723137.1
RefSeq:NP_723138.1 RefSeq:NP_723139.1 UniGene:Dm.7226
ProteinModelPortal:Q02748 SMR:Q02748 DIP:DIP-18113N IntAct:Q02748
MINT:MINT-892982 STRING:Q02748 PaxDb:Q02748 PRIDE:Q02748
EnsemblMetazoa:FBtr0079175 EnsemblMetazoa:FBtr0079176
EnsemblMetazoa:FBtr0079177 EnsemblMetazoa:FBtr0079178
EnsemblMetazoa:FBtr0307068 EnsemblMetazoa:FBtr0331201 GeneID:33835
KEGG:dme:Dmel_CG9075 CTD:33835 FlyBase:FBgn0001942
InParanoid:Q02748 OrthoDB:EOG4B8GVF PhylomeDB:Q02748 ChiTaRS:eIF-4a
GenomeRNAi:33835 NextBio:785508 Bgee:Q02748 GermOnline:CG9075
Uniprot:Q02748
Length = 403
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 134/351 (38%), Positives = 206/351 (58%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I + G DVI QA+SG GKTA F ++ LQQ + + + AL+L TRELA QI
Sbjct: 56 IQQRAIIPCVRGRDVIAQAQSGTGKTATFSIAILQQIDTSIRECQALILAPTRELATQIQ 115
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
Y+ + GG N++ +L++ C +VVGTPGR+ + K L + +
Sbjct: 116 RVVMALGEYMK-VHSHACIGGTNVREDARILESGC-HVVVGTPGRVYDMINRKVLRTQYI 173
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ F+LDE D+ML S + +Q++FKM P D QV++ SAT+ ++ V + FM+DP+ I
Sbjct: 174 KLFVLDEADEML-SRGFKDQIQDVFKMLPPDVQVILLSATMPPDVLEVSRCFMRDPVSIL 232
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLN---DLLDALDFNQVVIFVKSVSRAAELNKLL 237
V E +LTL G+ Q Y+ + + +N KL DL D L Q VIF + + +L + +
Sbjct: 233 VKKE-ELTLEGIKQFYVNVKQ--ENWKLGTLCDLYDTLSITQSVIFCNTRRKVDQLTQEM 289
Query: 238 VECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 297
NF +H M Q +R K F+ G+ R+L+ TDL+ RGID+++V++VINYD+P +
Sbjct: 290 SIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSN 349
Query: 298 ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
+ Y+HR+GR GRFG KG+AI F++ D IL ++ + I+E+P I
Sbjct: 350 RENYIHRIGRGGRFGRKGVAINFITD-DDRRILKDIEQFYHTTIEEMPANI 399
>UNIPROTKB|Q8JFP1 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 OMA:TENDARQ EMBL:AF515726
EMBL:AJ720280 IPI:IPI00588868 RefSeq:NP_989880.1 UniGene:Gga.4580
ProteinModelPortal:Q8JFP1 SMR:Q8JFP1 STRING:Q8JFP1 PRIDE:Q8JFP1
Ensembl:ENSGALT00000014135 Ensembl:ENSGALT00000039726 GeneID:395232
KEGG:gga:395232 InParanoid:Q8JFP1 NextBio:20815321
ArrayExpress:Q8JFP1 Uniprot:Q8JFP1
Length = 407
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 138/349 (39%), Positives = 203/349 (58%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I I G DVI QA+SG GKTA F +S LQQ E + + ALVL TRELA QI
Sbjct: 59 IQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIDLKETQALVLAPTRELAQQIQ 118
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
Y+ A GG N++ L+ E P IVVGTPGR+ + + LS K +
Sbjct: 119 KVILALGDYMGATCHACI-GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWI 177
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ F+LDE D+ML S + + EIF+ + QV++ SAT+ ++ V KKFM++P+ I
Sbjct: 178 KMFVLDEADEML-SRGFKDQIYEIFQKLSTNIQVVLLSATMPMDVLEVTKKFMREPIRIL 236
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + +
Sbjct: 237 VKKE-ELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHA 295
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + +
Sbjct: 296 RDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRE 355
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
Y+HR+GR GRFG KG+AI FV+ D IL ++ + ++E+P +
Sbjct: 356 NYIHRIGRGGRFGRKGVAINFVTE-EDKRILRDIETFYNTTVEEMPMNV 403
>UNIPROTKB|Q3SZ65 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 KO:K03257
OrthoDB:EOG4640C1 EMBL:BC103106 IPI:IPI00711238
RefSeq:NP_001029216.1 UniGene:Bt.13925 ProteinModelPortal:Q3SZ65
SMR:Q3SZ65 STRING:Q3SZ65 PRIDE:Q3SZ65 Ensembl:ENSBTAT00000019596
GeneID:286819 KEGG:bta:286819 CTD:1974 InParanoid:Q3SZ65
OMA:TENDARQ NextBio:20806473 ArrayExpress:Q3SZ65 Uniprot:Q3SZ65
Length = 407
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 139/349 (39%), Positives = 201/349 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI
Sbjct: 59 IQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQ 118
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
Y+ A GG N++ L+ E P IVVGTPGR+ + + LS K +
Sbjct: 119 KVILALGDYMGATCHACI-GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWI 177
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ F+LDE D+ML S + + EIF+ QV++ SAT+ ++ V KKFM+DP+ I
Sbjct: 178 KMFVLDEADEML-SRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRIL 236
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + +
Sbjct: 237 VKKE-ELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHA 295
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + +
Sbjct: 296 RDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRE 355
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
Y+HR+GR GRFG KG+AI FV+ D IL ++ + ++E+P +
Sbjct: 356 NYIHRIGRGGRFGRKGVAINFVTE-EDKRILRDIETFYNTTVEEMPMNV 403
>UNIPROTKB|E2R3J1 [details] [associations]
symbol:EIF4A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:AAEX03017297 RefSeq:XP_860499.2 ProteinModelPortal:E2R3J1
SMR:E2R3J1 PRIDE:E2R3J1 Ensembl:ENSCAFT00000021683 GeneID:488118
KEGG:cfa:488118 NextBio:20861546 Uniprot:E2R3J1
Length = 407
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 139/349 (39%), Positives = 201/349 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI
Sbjct: 59 IQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQ 118
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
Y+ A GG N++ L+ E P IVVGTPGR+ + + LS K +
Sbjct: 119 KVILALGDYMGATCHACI-GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWI 177
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ F+LDE D+ML S + + EIF+ QV++ SAT+ ++ V KKFM+DP+ I
Sbjct: 178 KMFVLDEADEML-SRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRIL 236
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + +
Sbjct: 237 VKKE-ELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHA 295
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + +
Sbjct: 296 RDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRE 355
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
Y+HR+GR GRFG KG+AI FV+ D IL ++ + ++E+P +
Sbjct: 356 NYIHRIGRGGRFGRKGVAINFVTE-EDKRILRDIETFYNTTVEEMPMNV 403
>UNIPROTKB|Q14240 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0004386
"helicase activity" evidence=TAS] [GO:0006446 "regulation of
translational initiation" evidence=TAS] [GO:0016281 "eukaryotic
translation initiation factor 4F complex" evidence=TAS] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_6900
GO:GO:0019048 GO:GO:0006446 GO:GO:0016281 EMBL:CH471052
GO:GO:0019221 GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 Reactome:REACT_1762 KO:K03257
CTD:1974 OMA:TENDARQ EMBL:D30655 EMBL:BT009860 EMBL:AC112907
EMBL:BC012547 EMBL:BC013708 EMBL:BC015842 EMBL:BC048105
IPI:IPI00328328 IPI:IPI00409717 RefSeq:NP_001958.2
UniGene:Hs.518475 UniGene:Hs.599481 PDB:3BOR PDBsum:3BOR
ProteinModelPortal:Q14240 SMR:Q14240 IntAct:Q14240 MINT:MINT-202114
STRING:Q14240 PhosphoSite:Q14240 DMDM:45645183 PaxDb:Q14240
PRIDE:Q14240 DNASU:1974 Ensembl:ENST00000323963
Ensembl:ENST00000440191 GeneID:1974 KEGG:hsa:1974 UCSC:uc003fqs.3
UCSC:uc003fqu.3 GeneCards:GC03P186539 H-InvDB:HIX0003899
HGNC:HGNC:3284 HPA:CAB011690 MIM:601102 neXtProt:NX_Q14240
PharmGKB:PA27712 InParanoid:Q14240 PhylomeDB:Q14240 ChiTaRS:EIF4A2
EvolutionaryTrace:Q14240 GenomeRNAi:1974 NextBio:7991
PMAP-CutDB:Q14240 ArrayExpress:Q14240 Bgee:Q14240 CleanEx:HS_EIF4A2
Genevestigator:Q14240 GermOnline:ENSG00000156976 Uniprot:Q14240
Length = 407
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 139/349 (39%), Positives = 201/349 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI
Sbjct: 59 IQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQ 118
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
Y+ A GG N++ L+ E P IVVGTPGR+ + + LS K +
Sbjct: 119 KVILALGDYMGATCHACI-GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWI 177
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ F+LDE D+ML S + + EIF+ QV++ SAT+ ++ V KKFM+DP+ I
Sbjct: 178 KMFVLDEADEML-SRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRIL 236
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + +
Sbjct: 237 VKKE-ELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHA 295
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + +
Sbjct: 296 RDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRE 355
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
Y+HR+GR GRFG KG+AI FV+ D IL ++ + ++E+P +
Sbjct: 356 NYIHRIGRGGRFGRKGVAINFVTE-EDKRILRDIETFYNTTVEEMPMNV 403
>UNIPROTKB|A6M930 [details] [associations]
symbol:EIF4A2 "Eukaryotic translation initiation factor 4A
isoform 2" species:9823 "Sus scrofa" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:CU633961 EMBL:DQ351285 RefSeq:NP_001093665.1 UniGene:Ssc.10843
ProteinModelPortal:A6M930 SMR:A6M930 PRIDE:A6M930
Ensembl:ENSSSCT00000012915 GeneID:100101928 KEGG:ssc:100101928
Uniprot:A6M930
Length = 407
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 139/349 (39%), Positives = 201/349 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI
Sbjct: 59 IQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQ 118
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
Y+ A GG N++ L+ E P IVVGTPGR+ + + LS K +
Sbjct: 119 KVILALGDYMGATCHACI-GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWI 177
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ F+LDE D+ML S + + EIF+ QV++ SAT+ ++ V KKFM+DP+ I
Sbjct: 178 KMFVLDEADEML-SRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRIL 236
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + +
Sbjct: 237 VKKE-ELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHA 295
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + +
Sbjct: 296 RDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRE 355
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
Y+HR+GR GRFG KG+AI FV+ D IL ++ + ++E+P +
Sbjct: 356 NYIHRIGRGGRFGRKGVAINFVTE-EDKRILRDIETFYNTTVEEMPMNV 403
>MGI|MGI:106906 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106906 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 OrthoDB:EOG4640C1 CTD:1974
OMA:TENDARQ EMBL:X12507 EMBL:X14422 EMBL:X56953 EMBL:AK076509
EMBL:U64706 IPI:IPI00400432 IPI:IPI00409918 PIR:S00985
RefSeq:NP_038534.2 UniGene:Mm.260084 ProteinModelPortal:P10630
SMR:P10630 IntAct:P10630 STRING:P10630 PhosphoSite:P10630
PaxDb:P10630 PRIDE:P10630 Ensembl:ENSMUST00000023599
Ensembl:ENSMUST00000115341 GeneID:13682 KEGG:mmu:13682
NextBio:284442 Bgee:P10630 CleanEx:MM_EIF4A2 Genevestigator:P10630
GermOnline:ENSMUSG00000022884 Uniprot:P10630
Length = 407
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 139/349 (39%), Positives = 201/349 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI
Sbjct: 59 IQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQ 118
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
Y+ A GG N++ L+ E P IVVGTPGR+ + + LS K +
Sbjct: 119 KVILALGDYMGATCHACI-GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWI 177
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ F+LDE D+ML S + + EIF+ QV++ SAT+ ++ V KKFM+DP+ I
Sbjct: 178 KMFVLDEADEML-SRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRIL 236
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + +
Sbjct: 237 VKKE-ELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHA 295
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + +
Sbjct: 296 RDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRE 355
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
Y+HR+GR GRFG KG+AI FV+ D IL ++ + ++E+P +
Sbjct: 356 NYIHRIGRGGRFGRKGVAINFVTE-EDKRILRDIETFYNTTVEEMPMNV 403
>RGD|1309225 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10116 "Rattus norvegicus" [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309225 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 EMBL:BC085859 IPI:IPI00193595
RefSeq:NP_001008336.1 UniGene:Rn.143972 ProteinModelPortal:Q5RKI1
SMR:Q5RKI1 STRING:Q5RKI1 PhosphoSite:Q5RKI1
World-2DPAGE:0004:Q5RKI1 PRIDE:Q5RKI1 GeneID:303831 KEGG:rno:303831
UCSC:RGD:1309225 InParanoid:Q5RKI1 NextBio:652169
ArrayExpress:Q5RKI1 Genevestigator:Q5RKI1
GermOnline:ENSRNOG00000001815 Uniprot:Q5RKI1
Length = 407
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 139/349 (39%), Positives = 201/349 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI
Sbjct: 59 IQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQ 118
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
Y+ A GG N++ L+ E P IVVGTPGR+ + + LS K +
Sbjct: 119 KVILALGDYMGATCHACI-GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWI 177
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ F+LDE D+ML S + + EIF+ QV++ SAT+ ++ V KKFM+DP+ I
Sbjct: 178 KMFVLDEADEML-SRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRIL 236
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + +
Sbjct: 237 VKKE-ELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHA 295
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + +
Sbjct: 296 RDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRE 355
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
Y+HR+GR GRFG KG+AI FV+ D IL ++ + ++E+P +
Sbjct: 356 NYIHRIGRGGRFGRKGVAINFVTE-EDKRILRDIETFYNTTVEEMPMNV 403
>UNIPROTKB|F8WFX2 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
OMA:TENDARQ IPI:IPI00193595 ProteinModelPortal:F8WFX2 PRIDE:F8WFX2
Ensembl:ENSRNOT00000002484 Uniprot:F8WFX2
Length = 408
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 139/349 (39%), Positives = 201/349 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI
Sbjct: 60 IQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQ 119
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
Y+ A GG N++ L+ E P IVVGTPGR+ + + LS K +
Sbjct: 120 KVILALGDYMGATCHACI-GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWI 178
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ F+LDE D+ML S + + EIF+ QV++ SAT+ ++ V KKFM+DP+ I
Sbjct: 179 KMFVLDEADEML-SRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRIL 237
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + +
Sbjct: 238 VKKE-ELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHA 296
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + +
Sbjct: 297 RDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRE 356
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
Y+HR+GR GRFG KG+AI FV+ D IL ++ + ++E+P +
Sbjct: 357 NYIHRIGRGGRFGRKGVAINFVTE-EDKRILRDIETFYNTTVEEMPMNV 404
>SGD|S000002428 [details] [associations]
symbol:FAL1 "Nucleolar protein required for maturation of 18S
rRNA" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0097078 "FAl1-SGD1 complex" evidence=IPI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002428 GO:GO:0005524
GO:GO:0005730 EMBL:BK006938 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 EMBL:X95966
EMBL:Z49770 GeneTree:ENSGT00680000100003 GO:GO:0000462 KO:K13025
OrthoDB:EOG4HTD1W EMBL:Z74317 EMBL:AY723767 PIR:S54644
RefSeq:NP_010304.3 RefSeq:NP_010309.3 ProteinModelPortal:Q12099
SMR:Q12099 DIP:DIP-4516N IntAct:Q12099 MINT:MINT-503789
STRING:Q12099 PaxDb:Q12099 PeptideAtlas:Q12099 EnsemblFungi:YDR021W
GeneID:851584 GeneID:851590 KEGG:sce:YDR021W KEGG:sce:YDR026C
CYGD:YDR021w KO:K09424 OMA:IFGKQPF NextBio:969055
Genevestigator:Q12099 GermOnline:YDR021W GO:GO:0097078
Uniprot:Q12099
Length = 399
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 131/348 (37%), Positives = 212/348 (60%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I Q I G DVI QA+SG GKTA F + LQ + + AL+L TRELA QI
Sbjct: 49 IQSRAITQIISGKDVIAQAQSGTGKTATFTIGLLQAIDLRKKDLQALILSPTRELASQIG 108
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIH-KDLLKNECPQIVVGTPGRILALARDKDLSLKN 119
+ Y+ ++ GG +K K + K+ C Q V GTPGR+L + + + L +N
Sbjct: 109 QVVKNLGDYM-NVNAFAITGGKTLKDDLKKMQKHGC-QAVSGTPGRVLDMIKKQMLQTRN 166
Query: 120 VRHFILDECDKML-ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPME 178
V+ +LDE D++L E+L ++ + +IF P + QV++ SAT++K+I V +KFM DP++
Sbjct: 167 VQMLVLDEADELLSETLGFKQQIYDIFAKLPKNCQVVVVSATMNKDILEVTRKFMNDPVK 226
Query: 179 IYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL 237
I V + +++L G+ Q+ + + + E K L D+ D+L Q VIF + + L++ L
Sbjct: 227 ILVKRD-EISLEGIKQYVVNVDKEEWKFDTLCDIYDSLTITQCVIFCNTKKKVDWLSQRL 285
Query: 238 VECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 297
++ NF + +H M QEER F+ G+ R+L++TD+ RGID+++V++VINYD+P+
Sbjct: 286 IQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEI 345
Query: 298 ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELP 345
+ Y+HR+GR+GRFG KG+AI F++ A D L +++ + + I +P
Sbjct: 346 IENYIHRIGRSGRFGRKGVAINFITKA-DLAKLREIEKFYSIKINPMP 392
>UNIPROTKB|A4R715 [details] [associations]
symbol:DHH1 "ATP-dependent RNA helicase DHH1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 GO:GO:0003723 GO:GO:0000932
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001234 GO:GO:0008026 eggNOG:COG0513 KO:K12614
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_003716556.1
GeneID:2676879 KEGG:mgr:MGG_03388 OrthoDB:EOG4QJVWF Uniprot:A4R715
Length = 535
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 139/355 (39%), Positives = 203/355 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D++ +AK+G GKTA FV+ L+ P ++ L+L TRELA Q
Sbjct: 73 IQEESIPVALTGRDILARAKNGTGKTAAFVVPALETINPKVSKIQCLILVPTRELAMQTS 132
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKN 119
+ +L I V V GG ++ D+L+ + P IVVGTPGRIL LA L
Sbjct: 133 QVCKTLGKHL-GINVMVTTGGTTLR--DDILRLQDPVHIVVGTPGRILDLAGKNVADLSE 189
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
FI+DE DK+L S++ ++++ + P D+QVM+FSAT ++ K M +P EI
Sbjct: 190 CPMFIMDEADKLL-SIEFTPVIEQLLQFHPKDRQVMLFSATFPISVKEFSDKNMTNPYEI 248
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
+ DE LTL G+ Q+Y + E +K LN L L NQ +IF S +R L K + E
Sbjct: 249 NLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITE 306
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+ H+ M Q+ R + F+ G R LV +DL+ RGIDI+ VN+VIN+D P +A+
Sbjct: 307 LGYSCFYSHAKMQQQARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAE 366
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
TYLHR+GR+GR+G GLAI +S ++ N ++ +I+ +P ID S Y+
Sbjct: 367 TYLHRIGRSGRYGHLGLAINLISWEDRFNLYN-IERDLGTEIQPIPSTIDKSLYV 420
>ASPGD|ASPL0000036135 [details] [associations]
symbol:AN10417 species:162425 "Emericella nidulans"
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0030996 "cell
cycle arrest in response to nitrogen starvation" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0033962
"cytoplasmic mRNA processing body assembly" evidence=IEA]
[GO:0000290 "deadenylation-dependent decapping of
nuclear-transcribed mRNA" evidence=IEA] [GO:0031142 "induction of
conjugation upon nitrogen starvation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:BN001306 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 OMA:HIDPARF
EnsemblFungi:CADANIAT00009573 Uniprot:C8VHA5
Length = 498
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 137/355 (38%), Positives = 204/355 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D++ +AK+G GKTA FV+ TL++ P + AL+L TRELA Q
Sbjct: 65 IQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTS 124
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKN 119
H + +L I V V GG + D+++ N+ I+VGTPGR+L LA L
Sbjct: 125 HVCKTLGKHL-GINVMVTTGGTGLM--DDIIRLNDAVHILVGTPGRVLDLASKGVADLSE 181
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
F++DE DK+L S + ++++ P D+QVM+FSAT ++ + M++P EI
Sbjct: 182 CPTFVMDEADKLL-SPEFTPVIEQLLSFHPKDRQVMLFSATFPMIVKSFKDRHMRNPYEI 240
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
+ DE LTL G+ Q+Y + E +K LN L L NQ +IF S +R L K + E
Sbjct: 241 NLMDE--LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITE 298
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+ H+ M Q+ R + F+ G R LV +DL+ RGIDI+ VN+VIN+D P +A+
Sbjct: 299 LGYSCFYSHARMLQQHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAE 358
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
TYLHR+GR+GRFG GLAI ++ D L +++ +I+ +P+ ID Y+
Sbjct: 359 TYLHRIGRSGRFGHLGLAINLINW-DDRFNLYKIEQELGTEIQPIPQNIDKKLYV 412
>WB|WBGene00002083 [details] [associations]
symbol:inf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0019915 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ
EMBL:Z12116 PIR:S26281 RefSeq:NP_001022623.1 RefSeq:NP_001022624.1
UniGene:Cel.6803 ProteinModelPortal:P27639 SMR:P27639
DIP:DIP-27102N IntAct:P27639 MINT:MINT-1112147 STRING:P27639
PaxDb:P27639 PRIDE:P27639 EnsemblMetazoa:F57B9.6a.1
EnsemblMetazoa:F57B9.6a.2 GeneID:175966 KEGG:cel:CELE_F57B9.6
UCSC:F57B9.6a.1 CTD:175966 WormBase:F57B9.6a WormBase:F57B9.6b
InParanoid:P27639 NextBio:890522 Uniprot:P27639
Length = 402
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 133/350 (38%), Positives = 206/350 (58%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I G DVI QA+SG GKTA F +S LQ+ + V ALV+ TRELA QI
Sbjct: 55 IQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQ 114
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKN 119
YL ++ + GG +++ D K E +VVGTPGR+ + L
Sbjct: 115 KVMSALGEYL-NVNILPCIGGTSVR--DDQRKLEAGIHVVVGTPGRVGDMINRNALDTSR 171
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
++ F+LDE D+ML S + + E+F+ P D QV++ SAT+ E+ V +FM++P+ I
Sbjct: 172 IKMFVLDEADEML-SRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRNPIRI 230
Query: 180 YVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
V + +LTL G+ Q YI + + E K L DL + ++ Q VIF + + L + +
Sbjct: 231 LVKKD-ELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCNTRRKVDTLTEKMT 289
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
E F C+H M Q ER T + F+ G+ R+L+ TD++ RGID+++V++VINYD+P +
Sbjct: 290 ENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNR 349
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
+ Y+HR+GR+GRFG KG+AI FV+ +D+ L ++++ + I+E+PE I
Sbjct: 350 ENYIHRIGRSGRFGRKGVAINFVTE-NDARQLKEIESYYTTQIEEMPESI 398
>ZFIN|ZDB-GENE-040426-2802 [details] [associations]
symbol:eif4a2 "eukaryotic translation initiation
factor 4A, isoform 2" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040426-2802 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
EMBL:CT027646 EMBL:CU929049 IPI:IPI00507769
ProteinModelPortal:F1R166 Ensembl:ENSDART00000130781
ArrayExpress:F1R166 Bgee:F1R166 Uniprot:F1R166
Length = 411
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 136/349 (38%), Positives = 200/349 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI
Sbjct: 63 IQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEQKETQALVLAPTRELAQQIQ 122
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
Y+ GG N++ L+ E P IVVGTPGR+ + + LS K +
Sbjct: 123 KVILALGDYM-GASCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWI 181
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ F+LDE D+ML S + + EIF+ + QV++ SAT+ ++ V KFM++P+ I
Sbjct: 182 KMFVLDEADEML-SRGFKDQIYEIFQKLSTNIQVVLLSATMPADVLEVTTKFMREPVRIL 240
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + +
Sbjct: 241 VKKE-ELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHA 299
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + +
Sbjct: 300 RDFTVSALHGDMDQKERDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRE 359
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
Y+HR+GR GRFG KG+AI FV+ D IL ++ + ++E+P +
Sbjct: 360 NYIHRIGRGGRFGRKGVAINFVTE-EDKRILRDIETFYNTTVEEMPMNV 407
>UNIPROTKB|Q3SZ54 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 EMBL:BC103130
IPI:IPI00698793 RefSeq:NP_001029400.1 UniGene:Bt.14169
ProteinModelPortal:Q3SZ54 SMR:Q3SZ54 STRING:Q3SZ54 PRIDE:Q3SZ54
Ensembl:ENSBTAT00000000144 GeneID:504958 KEGG:bta:504958 CTD:1973
InParanoid:Q3SZ54 KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1
NextBio:20866906 Uniprot:Q3SZ54
Length = 406
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 135/346 (39%), Positives = 198/346 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI
Sbjct: 58 IQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQ 117
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
Y+ GG N++ L+ E P I+VGTPGR+ + + LS K +
Sbjct: 118 KVVMALGDYM-GASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYI 176
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ F+LDE D+ML S + + +IF+ + QV++ SAT+ ++ V KKFM+DP+ I
Sbjct: 177 KMFVLDEADEML-SRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRIL 235
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + +
Sbjct: 236 VKKE-ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHA 294
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + +
Sbjct: 295 RDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRE 354
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELP 345
Y+HR+GR GRFG KG+AI V+ D L ++ + I+E+P
Sbjct: 355 NYIHRIGRGGRFGRKGVAINMVTE-EDKRTLRDIETFYNTSIEEMP 399
>UNIPROTKB|F1P895 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 OMA:PILEMED EMBL:AAEX03003619
EMBL:AAEX03003621 EMBL:AAEX03003620 Ensembl:ENSCAFT00000026357
Uniprot:F1P895
Length = 406
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 135/346 (39%), Positives = 198/346 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI
Sbjct: 58 IQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQ 117
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
Y+ GG N++ L+ E P I+VGTPGR+ + + LS K +
Sbjct: 118 KVVMALGDYM-GASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYI 176
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ F+LDE D+ML S + + +IF+ + QV++ SAT+ ++ V KKFM+DP+ I
Sbjct: 177 KMFVLDEADEML-SRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRIL 235
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + +
Sbjct: 236 VKKE-ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHA 294
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + +
Sbjct: 295 RDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRE 354
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELP 345
Y+HR+GR GRFG KG+AI V+ D L ++ + I+E+P
Sbjct: 355 NYIHRIGRGGRFGRKGVAINMVTE-EDKRTLRDIETFYNTSIEEMP 399
>UNIPROTKB|J9NY67 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
EMBL:AAEX03006506 EMBL:AAEX03006505 RefSeq:NP_001238871.1
ProteinModelPortal:J9NY67 Ensembl:ENSCAFT00000014379
GeneID:100688577 KEGG:cfa:100688577 Uniprot:J9NY67
Length = 406
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 135/346 (39%), Positives = 198/346 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI
Sbjct: 58 IQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQ 117
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
Y+ GG N++ L+ E P I+VGTPGR+ + + LS K +
Sbjct: 118 KVVMALGDYM-GASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYI 176
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ F+LDE D+ML S + + +IF+ + QV++ SAT+ ++ V KKFM+DP+ I
Sbjct: 177 KMFVLDEADEML-SRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRIL 235
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + +
Sbjct: 236 VKKE-ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHA 294
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + +
Sbjct: 295 RDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRE 354
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELP 345
Y+HR+GR GRFG KG+AI V+ D L ++ + I+E+P
Sbjct: 355 NYIHRIGRGGRFGRKGVAINMVTE-EDKRTLRDIETFYNTSIEEMP 399
>UNIPROTKB|P60842 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003729
"mRNA binding" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000339 "RNA cap binding" evidence=TAS]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=TAS] [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
Reactome:REACT_6900 EMBL:CH471108 GO:GO:0019048
Pathway_Interaction_DB:mtor_4pathway GO:GO:0006413 GO:GO:0016281
GO:GO:0031100 GO:GO:0003729 GO:GO:0019221 GO:GO:0008135
GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 Reactome:REACT_1762 CTD:1973 KO:K03257
OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:D13748 EMBL:BT019880
EMBL:BT019881 EMBL:AK312630 EMBL:AC016876 EMBL:BC006210
EMBL:BC009585 EMBL:BC073752 IPI:IPI00025491 PIR:S33681
RefSeq:NP_001191439.1 RefSeq:NP_001407.1 UniGene:Hs.129673 PDB:2G9N
PDB:2ZU6 PDB:3EIQ PDBsum:2G9N PDBsum:2ZU6 PDBsum:3EIQ
ProteinModelPortal:P60842 SMR:P60842 DIP:DIP-29755N IntAct:P60842
MINT:MINT-5001111 STRING:P60842 PhosphoSite:P60842 DMDM:46397463
PaxDb:P60842 PRIDE:P60842 DNASU:1973 Ensembl:ENST00000293831
Ensembl:ENST00000577269 GeneID:1973 KEGG:hsa:1973 UCSC:uc002gho.2
GeneCards:GC17P007476 HGNC:HGNC:3282 HPA:CAB011689 MIM:602641
neXtProt:NX_P60842 PharmGKB:PA27710 PhylomeDB:P60842 ChiTaRS:EIF4A1
EvolutionaryTrace:P60842 GenomeRNAi:1973 NextBio:7987
ArrayExpress:P60842 Bgee:P60842 CleanEx:HS_EIF4A1
Genevestigator:P60842 GermOnline:ENSG00000161960 GO:GO:0000339
Uniprot:P60842
Length = 406
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 135/346 (39%), Positives = 198/346 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI
Sbjct: 58 IQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQ 117
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
Y+ GG N++ L+ E P I+VGTPGR+ + + LS K +
Sbjct: 118 KVVMALGDYM-GASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYI 176
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ F+LDE D+ML S + + +IF+ + QV++ SAT+ ++ V KKFM+DP+ I
Sbjct: 177 KMFVLDEADEML-SRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRIL 235
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + +
Sbjct: 236 VKKE-ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHA 294
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + +
Sbjct: 295 RDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRE 354
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELP 345
Y+HR+GR GRFG KG+AI V+ D L ++ + I+E+P
Sbjct: 355 NYIHRIGRGGRFGRKGVAINMVTE-EDKRTLRDIETFYNTSIEEMP 399
>UNIPROTKB|A6M928 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:CU914279 EMBL:DQ351283 RefSeq:NP_001093666.1
UniGene:Ssc.22034 ProteinModelPortal:A6M928 SMR:A6M928 PRIDE:A6M928
Ensembl:ENSSSCT00000019541 GeneID:100101929 KEGG:ssc:100101929
Uniprot:A6M928
Length = 406
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 135/346 (39%), Positives = 198/346 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI
Sbjct: 58 IQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQ 117
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
Y+ GG N++ L+ E P I+VGTPGR+ + + LS K +
Sbjct: 118 KVVMALGDYM-GASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYI 176
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ F+LDE D+ML S + + +IF+ + QV++ SAT+ ++ V KKFM+DP+ I
Sbjct: 177 KMFVLDEADEML-SRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRIL 235
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + +
Sbjct: 236 VKKE-ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHA 294
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + +
Sbjct: 295 RDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRE 354
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELP 345
Y+HR+GR GRFG KG+AI V+ D L ++ + I+E+P
Sbjct: 355 NYIHRIGRGGRFGRKGVAINMVTE-EDKRTLRDIETFYNTSIEEMP 399
>MGI|MGI:95303 [details] [associations]
symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95303 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 CTD:1973
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:X03039 EMBL:X03040
EMBL:L36611 EMBL:M22873 EMBL:L36608 EMBL:L36609 EMBL:L36610
EMBL:AB011595 EMBL:AK077429 EMBL:BC049915 IPI:IPI00118676
PIR:JS0039 RefSeq:NP_659207.1 UniGene:Mm.279821 UniGene:Mm.371557
UniGene:Mm.473799 ProteinModelPortal:P60843 SMR:P60843
MINT:MINT-202155 STRING:P60843 PhosphoSite:P60843
REPRODUCTION-2DPAGE:P60843 PaxDb:P60843 PRIDE:P60843
Ensembl:ENSMUST00000163666 GeneID:13681 KEGG:mmu:13681
InParanoid:P60843 NextBio:284438 Bgee:P60843 CleanEx:MM_EIF4A1
Genevestigator:P60843 GermOnline:ENSMUSG00000064241 Uniprot:P60843
Length = 406
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 135/346 (39%), Positives = 198/346 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI
Sbjct: 58 IQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQ 117
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
Y+ GG N++ L+ E P I+VGTPGR+ + + LS K +
Sbjct: 118 KVVMALGDYM-GASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYI 176
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ F+LDE D+ML S + + +IF+ + QV++ SAT+ ++ V KKFM+DP+ I
Sbjct: 177 KMFVLDEADEML-SRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRIL 235
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + +
Sbjct: 236 VKKE-ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHA 294
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + +
Sbjct: 295 RDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRE 354
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELP 345
Y+HR+GR GRFG KG+AI V+ D L ++ + I+E+P
Sbjct: 355 NYIHRIGRGGRFGRKGVAINMVTE-EDKRTLRDIETFYNTSIEEMP 399
>UNIPROTKB|Q6P3V8 [details] [associations]
symbol:Eif4a1 "Protein Eif4a1" species:10116 "Rattus
norvegicus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:735141
GO:GO:0005524 GO:GO:0003743 EMBL:CH473948 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:BC063812 IPI:IPI00369618 RefSeq:NP_955404.1
UniGene:Rn.91523 SMR:Q6P3V8 STRING:Q6P3V8
Ensembl:ENSRNOT00000049048 GeneID:287436 KEGG:rno:287436
InParanoid:Q6P3V8 NextBio:626135 Genevestigator:Q6P3V8
Uniprot:Q6P3V8
Length = 406
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 135/346 (39%), Positives = 198/346 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI
Sbjct: 58 IQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQ 117
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
Y+ GG N++ L+ E P I+VGTPGR+ + + LS K +
Sbjct: 118 KVVMALGDYM-GASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYI 176
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ F+LDE D+ML S + + +IF+ + QV++ SAT+ ++ V KKFM+DP+ I
Sbjct: 177 KMFVLDEADEML-SRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRIL 235
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + +
Sbjct: 236 VKKE-ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHA 294
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + +
Sbjct: 295 RDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRE 354
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELP 345
Y+HR+GR GRFG KG+AI V+ D L ++ + I+E+P
Sbjct: 355 NYIHRIGRGGRFGRKGVAINMVTE-EDKRTLRDIETFYNTSIEEMP 399
>ASPGD|ASPL0000037981 [details] [associations]
symbol:AN2932 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 KO:K03257 OMA:TENDARQ RefSeq:XP_660536.1
PRIDE:Q5B948 GeneID:2874390 KEGG:ani:AN2932.2 OrthoDB:EOG4PG98F
Uniprot:Q5B948
Length = 398
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 134/349 (38%), Positives = 207/349 (59%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I + G DVI QA+SG GKTA F +S LQ+ +PN AL++ TRELA QI
Sbjct: 51 IQQRAILPIVKGNDVIAQAQSGTGKTATFSISALQKLDPNVKACQALIVAPTRELAQQIQ 110
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
++ +I+ GG ++ + L+ E PQIVVGTPGRI + + + L +
Sbjct: 111 KVVIAIGDFM-NIQCHACIGGTAVRDDMNALR-EGPQIVVGTPGRIHDMIQRRVLKTDQM 168
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ FILDE D+ML S + +IF++ P QV++ SAT+ +++ V KFM+DP+ I
Sbjct: 169 KMFILDEADEML-SRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRIL 227
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V + +LTL G+ Q YI + + E K L+DL + + Q VIF + + L L
Sbjct: 228 VKKQ-ELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTA 286
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+F +H M Q +R K F+ G+ R+L+ATDL+ RGID+++V++VINYD+P + +
Sbjct: 287 RDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRE 346
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
Y+HR+GR GRFG KG+AI FV+ A D ++ +++ + I+E+P +
Sbjct: 347 NYIHRIGRGGRFGRKGVAINFVT-ADDVRMMREIEQFYSTQIEEMPMNV 394
>CGD|CAL0004095 [details] [associations]
symbol:TIF species:5476 "Candida albicans" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095 GO:GO:0005524
GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045 EMBL:AACQ01000042
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 137/350 (39%), Positives = 204/350 (58%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I G DV+ QA+SG GKTA F +S LQ+ N AL+L TRELA QI
Sbjct: 49 IQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRINENEKATQALILAPTRELALQIK 108
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
+ YL + V GG ++ + ++ QIVVGTPGR+L + + V
Sbjct: 109 NVITAIGLYLK-VTVHASIGGTSMSDDIEAFRSGV-QIVVGTPGRVLDMIERRYFKTDKV 166
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ FILDE D+ML S + + IF++ P Q+++ SAT+ +++ V KFM +P+ I
Sbjct: 167 KMFILDEADEMLSS-GFKEQIYNIFRLLPETTQIVLLSATMPQDVLEVTTKFMNNPVRIL 225
Query: 181 VDDEAKLTLHGLVQHYIKLSELE--KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
V + +LTL G+ Q YI + ELE K L DL D++ Q VIF + S+ L L
Sbjct: 226 VKKD-ELTLEGIKQFYINV-ELEDYKFDCLCDLYDSISVTQAVIFCNTRSKVEFLTNKLR 283
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
E +F IH+ + Q ER T K F+ G+ RIL++TDL+ RGID+++V++VINYD+P +
Sbjct: 284 EQHFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANK 343
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
+ Y+HR+GR GRFG KG+AI FV+ D ++ +++ + I+E+P I
Sbjct: 344 ENYIHRIGRGGRFGRKGVAINFVTDR-DVGMMREIEKFYSTQIEEMPADI 392
>UNIPROTKB|P87206 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:237561 "Candida albicans SC5314" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095
GO:GO:0005524 GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045
EMBL:AACQ01000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K03257 EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 137/350 (39%), Positives = 204/350 (58%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I G DV+ QA+SG GKTA F +S LQ+ N AL+L TRELA QI
Sbjct: 49 IQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRINENEKATQALILAPTRELALQIK 108
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
+ YL + V GG ++ + ++ QIVVGTPGR+L + + V
Sbjct: 109 NVITAIGLYLK-VTVHASIGGTSMSDDIEAFRSGV-QIVVGTPGRVLDMIERRYFKTDKV 166
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ FILDE D+ML S + + IF++ P Q+++ SAT+ +++ V KFM +P+ I
Sbjct: 167 KMFILDEADEMLSS-GFKEQIYNIFRLLPETTQIVLLSATMPQDVLEVTTKFMNNPVRIL 225
Query: 181 VDDEAKLTLHGLVQHYIKLSELE--KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
V + +LTL G+ Q YI + ELE K L DL D++ Q VIF + S+ L L
Sbjct: 226 VKKD-ELTLEGIKQFYINV-ELEDYKFDCLCDLYDSISVTQAVIFCNTRSKVEFLTNKLR 283
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
E +F IH+ + Q ER T K F+ G+ RIL++TDL+ RGID+++V++VINYD+P +
Sbjct: 284 EQHFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANK 343
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
+ Y+HR+GR GRFG KG+AI FV+ D ++ +++ + I+E+P I
Sbjct: 344 ENYIHRIGRGGRFGRKGVAINFVTDR-DVGMMREIEKFYSTQIEEMPADI 392
>UNIPROTKB|J9NU36 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00530000062880 EMBL:AAEX03006506
EMBL:AAEX03006505 Ensembl:ENSCAFT00000049437 Uniprot:J9NU36
Length = 423
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 135/345 (39%), Positives = 198/345 (57%)
Query: 2 QHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICH 61
Q +P I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI
Sbjct: 77 QRAILP-CIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQK 135
Query: 62 EFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVR 121
Y+ GG N++ L+ E P I+VGTPGR+ + + LS K ++
Sbjct: 136 VVMALGDYM-GASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIK 194
Query: 122 HFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYV 181
F+LDE D+ML S + + +IF+ + QV++ SAT+ ++ V KKFM+DP+ I V
Sbjct: 195 MFVLDEADEML-SRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILV 253
Query: 182 DDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + +
Sbjct: 254 KKE-ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHAR 312
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
+F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + +
Sbjct: 313 DFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNREN 372
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELP 345
Y+HR+GR GRFG KG+AI V+ D L ++ + I+E+P
Sbjct: 373 YIHRIGRGGRFGRKGVAINMVTE-EDKRTLRDIETFYNTSIEEMP 416
>UNIPROTKB|A4QVP2 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:CM001231 GO:GO:0043581 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OrthoDB:EOG4PG98F
RefSeq:XP_003711015.1 ProteinModelPortal:A4QVP2 SMR:A4QVP2
EnsemblFungi:MGG_04400T0 GeneID:2677872 KEGG:mgr:MGG_04400
Uniprot:A4QVP2
Length = 396
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 132/349 (37%), Positives = 207/349 (59%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I I G DVI QA+SG GKTA F +S LQ+ + N Q AL+L TRELA QI
Sbjct: 49 IQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKIDTNVKQCQALILAPTRELAQQIQ 108
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
++ +I+ GG +++ L++ PQ+VVGTPGR+ + + + L +
Sbjct: 109 KVVVAIGDFM-NIECHACIGGTSVRDDMKALQDG-PQVVVGTPGRVHDMIQRRFLKTDGM 166
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ F+LDE D+ML S + +IF++ P QV++ SAT+ +++ V KFM+DP+ I
Sbjct: 167 KMFVLDEADEML-SRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRIL 225
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V + +LTL G+ Q YI + + E K L+DL + + Q VIF + + L L
Sbjct: 226 VKKD-ELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTA 284
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+F +H M Q +R K F+ G+ R+L+ATDL+ RGID+++V++VINYD+P + +
Sbjct: 285 RDFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRE 344
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
Y+HR+GR GRFG KG+AI FV+ A D ++ +++ + I+E+P +
Sbjct: 345 NYIHRIGRGGRFGRKGVAINFVT-ADDVRMMREIEQFYSTQIEEMPMNV 392
>TAIR|locus:2050715 [details] [associations]
symbol:AT2G45810 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006417 GO:GO:0006397
GO:GO:0003723 GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC004665 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 OMA:HIDPARF ProtClustDB:CLSN2683443 EMBL:AY039862
EMBL:BT002709 EMBL:AJ010459 IPI:IPI00528597 PIR:T02466 PIR:T51740
RefSeq:NP_182105.1 UniGene:At.46 ProteinModelPortal:Q94BV4
SMR:Q94BV4 IntAct:Q94BV4 STRING:Q94BV4 PaxDb:Q94BV4 PRIDE:Q94BV4
EnsemblPlants:AT2G45810.1 GeneID:819189 KEGG:ath:AT2G45810
GeneFarm:917 TAIR:At2g45810 InParanoid:Q94BV4 PhylomeDB:Q94BV4
Genevestigator:Q94BV4 GermOnline:AT2G45810 Uniprot:Q94BV4
Length = 528
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 134/354 (37%), Positives = 207/354 (58%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D++ +AK+G GKT F + TL++ +P + A++L TRELA Q
Sbjct: 180 IQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEKIDPENNVIQAVILVPTRELALQTS 239
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKN 119
+ S YL I+V V GG +++ D+++ P ++VGTPGRIL LA+ LK+
Sbjct: 240 QVCKELSKYLK-IEVMVTTGGTSLR--DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKD 296
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
++DE DK+L S++ + ++E+ + P +Q++MFSAT ++ ++++ P I
Sbjct: 297 CAMLVMDEADKLL-SVEFQPSIEELIQFLPESRQILMFSATFPVTVKSFKDRYLKKPYII 355
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
+ D+ LTL G+ Q+Y + E +K LN L L NQ +IF SV+R L K + E
Sbjct: 356 NLMDQ--LTLMGVTQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITE 413
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+ IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P +++
Sbjct: 414 LGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSE 473
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTY 353
+YLHRVGR+GRFG GLA+ V+ D + Q + +IK +P ID + Y
Sbjct: 474 SYLHRVGRSGRFGHLGLAVNLVTY-EDRFKMYQTEQELGTEIKPIPSLIDKAIY 526
>ZFIN|ZDB-GENE-031030-2 [details] [associations]
symbol:eif4a1a "eukaryotic translation initiation
factor 4A, isoform 1A" species:7955 "Danio rerio" [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-2 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 HSSP:P10081 GeneTree:ENSGT00530000062880
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:CR848032 EMBL:BC048899
IPI:IPI00502344 RefSeq:NP_938180.1 UniGene:Dr.75120 SMR:Q802C9
STRING:Q802C9 Ensembl:ENSDART00000058913 GeneID:386634
KEGG:dre:386634 CTD:386634 InParanoid:Q802C9 NextBio:20813962
Uniprot:Q802C9
Length = 406
Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 135/349 (38%), Positives = 199/349 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I I G DVI QA+SG GKTA F +S LQQ + A+VL TRELA QI
Sbjct: 58 IQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIDVELKATQAMVLAPTRELAQQIQ 117
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
Y+ A GG N++ L+ + P IVVGTPGR+ + + LS K +
Sbjct: 118 KVVLALGDYMGATCHACI-GGTNVRNDVQKLQADVPHIVVGTPGRVFDMLNRRYLSPKYI 176
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ F LDE D+ML S + + EIF+ D QV++ SAT+ +E+ V KFM+DP+ I
Sbjct: 177 KMFALDEADEML-SRGFKDQIYEIFQKLATDTQVILLSATMPQEVLEVTTKFMRDPVRIL 235
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V E +LTL G+ Q YI + + E K L DL + L Q VIF+ + + L + +
Sbjct: 236 VKKE-ELTLEGIRQFYINVEKEEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHA 294
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+F +H M Q+ER K F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + +
Sbjct: 295 RDFTVSALHGDMEQKERDVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRE 354
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
Y+HR+GR GRFG KG+AI ++ D L ++ + ++E+P +
Sbjct: 355 NYIHRIGRGGRFGRKGVAINMITE-DDKRTLRDIETFYNTTVEEMPMNV 402
>CGD|CAL0006152 [details] [associations]
symbol:DHH1 species:5476 "Candida albicans" [GO:0010494
"cytoplasmic stress granule" evidence=IDA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IEA] [GO:0030996 "cell cycle arrest
in response to nitrogen starvation" evidence=IEA] [GO:0034063
"stress granule assembly" evidence=IEA] [GO:0000753 "cell
morphogenesis involved in conjugation with cellular fusion"
evidence=IEA] [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] [GO:0000290 "deadenylation-dependent
decapping of nuclear-transcribed mRNA" evidence=IEA] [GO:0031142
"induction of conjugation upon nitrogen starvation" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0006152 GO:GO:0005524 GO:GO:0006417
GO:GO:0006397 GO:GO:0003723 GO:GO:0000932 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0008026 EMBL:AACQ01000038 EMBL:AACQ01000037 eggNOG:COG0513
KO:K12614 InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_718704.1
RefSeq:XP_718788.1 ProteinModelPortal:Q5AAW3 SMR:Q5AAW3
GeneID:3639490 GeneID:3639628 KEGG:cal:CaO19.13577
KEGG:cal:CaO19.6197 Uniprot:Q5AAW3
Length = 549
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 136/355 (38%), Positives = 204/355 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D++ +AK+G GKTA F++ LQ +P +V AL+L TRELA Q
Sbjct: 56 IQEESIPMALAGRDILARAKNGTGKTASFIIPCLQLVKPKLNKVQALILVPTRELALQTS 115
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKN 119
++ + V GG +++ D+++ P I+VGTPGR+L LA K + L
Sbjct: 116 QVVRTLGKHV-GTQCMVTTGGTSLR--DDIVRLHDPVHILVGTPGRVLDLAARKVVDLSE 172
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
F++DE DKML S + + +++I + P ++Q ++FSAT ++ K + P EI
Sbjct: 173 CPLFVMDEADKML-SREFKGIIEQILEFFPPNRQALLFSATFPLAVKSFMDKHLTKPYEI 231
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
+ DE LTL G+ Q Y + E +K LN L L NQ +IF S +R L K + E
Sbjct: 232 NLMDE--LTLKGISQFYAFVEEKQKLHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITE 289
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+ H+ M Q+ R + F++G R LV +DL+ RGIDI+ VN+VIN+D P +A+
Sbjct: 290 LGYSCYYSHAKMPQQARNKVFHEFRQGKVRNLVCSDLLTRGIDIQAVNVVINFDFPKTAE 349
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
TYLHR+GR+GRFG GLAI +S +D L +++ +IK +P ID S Y+
Sbjct: 350 TYLHRIGRSGRFGHLGLAINLMSW-NDRYSLYKIEQELGTEIKPIPATIDKSLYV 403
>UNIPROTKB|Q5AAW3 [details] [associations]
symbol:DHH1 "ATP-dependent RNA helicase DHH1"
species:237561 "Candida albicans SC5314" [GO:0010494 "cytoplasmic
stress granule" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0006152 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 GO:GO:0003723 GO:GO:0000932
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0008026 EMBL:AACQ01000038 EMBL:AACQ01000037
eggNOG:COG0513 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_718704.1 RefSeq:XP_718788.1 ProteinModelPortal:Q5AAW3
SMR:Q5AAW3 GeneID:3639490 GeneID:3639628 KEGG:cal:CaO19.13577
KEGG:cal:CaO19.6197 Uniprot:Q5AAW3
Length = 549
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 136/355 (38%), Positives = 204/355 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D++ +AK+G GKTA F++ LQ +P +V AL+L TRELA Q
Sbjct: 56 IQEESIPMALAGRDILARAKNGTGKTASFIIPCLQLVKPKLNKVQALILVPTRELALQTS 115
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKN 119
++ + V GG +++ D+++ P I+VGTPGR+L LA K + L
Sbjct: 116 QVVRTLGKHV-GTQCMVTTGGTSLR--DDIVRLHDPVHILVGTPGRVLDLAARKVVDLSE 172
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
F++DE DKML S + + +++I + P ++Q ++FSAT ++ K + P EI
Sbjct: 173 CPLFVMDEADKML-SREFKGIIEQILEFFPPNRQALLFSATFPLAVKSFMDKHLTKPYEI 231
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
+ DE LTL G+ Q Y + E +K LN L L NQ +IF S +R L K + E
Sbjct: 232 NLMDE--LTLKGISQFYAFVEEKQKLHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITE 289
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+ H+ M Q+ R + F++G R LV +DL+ RGIDI+ VN+VIN+D P +A+
Sbjct: 290 LGYSCYYSHAKMPQQARNKVFHEFRQGKVRNLVCSDLLTRGIDIQAVNVVINFDFPKTAE 349
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
TYLHR+GR+GRFG GLAI +S +D L +++ +IK +P ID S Y+
Sbjct: 350 TYLHRIGRSGRFGHLGLAINLMSW-NDRYSLYKIEQELGTEIKPIPATIDKSLYV 403
>SGD|S000001767 [details] [associations]
symbol:TIF1 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;IMP;IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA;IMP;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP;IDA] [GO:0005840 "ribosome" evidence=TAS] [GO:0016281
"eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000001767
SGD:S000003674 GO:GO:0005524 GO:GO:0005737 EMBL:BK006943
EMBL:BK006944 GO:GO:0003743 EMBL:X87371 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 KO:K03854
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 135/351 (38%), Positives = 205/351 (58%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I I G DV+ QA+SG GKT F ++ LQ+ + + AL+L TRELA QI
Sbjct: 48 IQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQIQ 107
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
+ ++ DIKV GG + + L++ QIVVGTPGR+ + + +
Sbjct: 108 KVVMALAFHM-DIKVHACIGGTSFVEDAEGLRDA--QIVVGTPGRVFDNIQRRRFRTDKI 164
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ FILDE D+ML S + + +IF + P QV++ SAT+ ++ V KFM++P+ I
Sbjct: 165 KMFILDEADEMLSS-GFKEQIYQIFTLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRIL 223
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V + +LTL G+ Q Y+ + E E K L DL D++ Q VIF + + EL L
Sbjct: 224 VKKD-ELTLEGIKQFYVNVEEEEYKYECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRN 282
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
F I+S + Q+ER T K F+ G+ RIL++TDL+ RGID+++V++VINYD+P + +
Sbjct: 283 DKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKE 342
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDT 350
Y+HR+GR GRFG KG+AI FV++ D + +++ + I+ELP I T
Sbjct: 343 NYIHRIGRGGRFGRKGVAINFVTN-EDVGAMRELEKFYSTQIEELPSDIAT 392
>SGD|S000003674 [details] [associations]
symbol:TIF2 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;ISS;IDA;TAS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISS;IDA] [GO:0006446 "regulation of translational
initiation" evidence=ISS] [GO:0005840 "ribosome" evidence=TAS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation"
evidence=IEA;TAS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000001767 SGD:S000003674 GO:GO:0005524
GO:GO:0005737 EMBL:BK006943 EMBL:BK006944 GO:GO:0003743 EMBL:X87371
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03854 eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 135/351 (38%), Positives = 205/351 (58%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I I G DV+ QA+SG GKT F ++ LQ+ + + AL+L TRELA QI
Sbjct: 48 IQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQIQ 107
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
+ ++ DIKV GG + + L++ QIVVGTPGR+ + + +
Sbjct: 108 KVVMALAFHM-DIKVHACIGGTSFVEDAEGLRDA--QIVVGTPGRVFDNIQRRRFRTDKI 164
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ FILDE D+ML S + + +IF + P QV++ SAT+ ++ V KFM++P+ I
Sbjct: 165 KMFILDEADEMLSS-GFKEQIYQIFTLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRIL 223
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V + +LTL G+ Q Y+ + E E K L DL D++ Q VIF + + EL L
Sbjct: 224 VKKD-ELTLEGIKQFYVNVEEEEYKYECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRN 282
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
F I+S + Q+ER T K F+ G+ RIL++TDL+ RGID+++V++VINYD+P + +
Sbjct: 283 DKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKE 342
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDT 350
Y+HR+GR GRFG KG+AI FV++ D + +++ + I+ELP I T
Sbjct: 343 NYIHRIGRGGRFGRKGVAINFVTN-EDVGAMRELEKFYSTQIEELPSDIAT 392
>POMBASE|SPBC776.09 [details] [associations]
symbol:ste13 "ATP-dependent RNA helicase Ste13"
species:4896 "Schizosaccharomyces pombe" [GO:0000290
"deadenylation-dependent decapping of nuclear-transcribed mRNA"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006417 "regulation of translation"
evidence=IEA] [GO:0030996 "cell cycle arrest in response to
nitrogen starvation" evidence=IMP] [GO:0031142 "induction of
conjugation upon nitrogen starvation" evidence=IMP] [GO:0051028
"mRNA transport" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBC776.09
GO:GO:0005524 GO:GO:0006417 EMBL:CU329671 GO:GO:0006397
GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0000932 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0031142 eggNOG:COG0513 HOGENOM:HOG000268797 KO:K12614
OMA:YSHARMK InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000290
OrthoDB:EOG4QJVWF EMBL:D29795 PIR:S46654 RefSeq:NP_596324.1
ProteinModelPortal:Q09181 SMR:Q09181 STRING:Q09181 PRIDE:Q09181
EnsemblFungi:SPBC776.09.1 GeneID:2541216 KEGG:spo:SPBC776.09
NextBio:20802328 GO:GO:0030996 Uniprot:Q09181
Length = 485
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 132/355 (37%), Positives = 205/355 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D++ +AK+G GKTA FV+ +L++ + ++ L+L TRELA Q
Sbjct: 70 IQEESIPIALSGRDILARAKNGTGKTAAFVIPSLEKVDTKKSKIQTLILVPTRELALQTS 129
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKN 119
+ ++ ++KV V GG ++ D+++ N+ IVVGTPGR+L LA
Sbjct: 130 QVCKTLGKHM-NVKVMVTTGGTTLR--DDIIRLNDTVHIVVGTPGRVLDLAGKGVADFSE 186
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
F++DE DK+L S + ++++ P ++Q+ ++SAT ++ K + P EI
Sbjct: 187 CTTFVMDEADKLL-SPEFTPIIEQLLSYFPKNRQISLYSATFPLIVKNFMDKHLNKPYEI 245
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
+ DE LTL G+ Q+Y + E +K LN L L NQ +IF S +R L K + E
Sbjct: 246 NLMDE--LTLRGVTQYYAFVDESQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITE 303
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+ H+ M Q R + F+ G R LV +DL+ RGIDI+ VN+VIN+D P +A+
Sbjct: 304 LGYSCFYSHAKMLQSHRNRVFHNFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAE 363
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
TYLHR+GR+GRFG +GLAI+F+S A D L +++ +I+ +P ID S Y+
Sbjct: 364 TYLHRIGRSGRFGHRGLAISFISWA-DRFNLYRIENELGTEIQPIPPSIDPSLYV 417
>TAIR|locus:2098886 [details] [associations]
symbol:AT3G61240 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006417 GO:GO:0006397 GO:GO:0003723
EMBL:AL137898 GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
EMBL:AJ010464 EMBL:AY120712 EMBL:BT000038 IPI:IPI00548726
PIR:T47916 PIR:T51743 RefSeq:NP_191683.1 RefSeq:NP_974472.1
UniGene:At.20236 ProteinModelPortal:Q9M2E0 SMR:Q9M2E0 STRING:Q9M2E0
PaxDb:Q9M2E0 PRIDE:Q9M2E0 EnsemblPlants:AT3G61240.1
EnsemblPlants:AT3G61240.2 GeneID:825296 KEGG:ath:AT3G61240
GeneFarm:928 TAIR:At3g61240 InParanoid:Q9M2E0 OMA:PLAMDQR
PhylomeDB:Q9M2E0 ProtClustDB:CLSN2683443 Genevestigator:Q9M2E0
GermOnline:AT3G61240 Uniprot:Q9M2E0
Length = 498
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 133/354 (37%), Positives = 205/354 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D++ +AK+G GKT F + L++ +PN + A++L TRELA Q
Sbjct: 150 IQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNNNVIQAMILVPTRELALQTS 209
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKN 119
+ S YL +I+V V GG +++ D+++ P ++VGTPGRIL L + LK+
Sbjct: 210 QVCKELSKYL-NIQVMVTTGGTSLR--DDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKD 266
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
++DE DK+L S + + ++E+ + P ++Q +MFSAT ++ + ++ P I
Sbjct: 267 CAMLVMDEADKLL-SAEFQPSLEELIQFLPQNRQFLMFSATFPVTVKAFKDRHLRKPYVI 325
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
+ D+ LTL G+ Q+Y + E +K LN L L NQ +IF SV+R L K + E
Sbjct: 326 NLMDQ--LTLMGVTQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITE 383
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+ IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P +++
Sbjct: 384 LGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSE 443
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTY 353
+YLHRVGR+GRFG GLA+ V+ D + Q + +IK +P ID + Y
Sbjct: 444 SYLHRVGRSGRFGHLGLAVNLVTY-EDRFKMYQTEQELGTEIKPIPSNIDQAIY 496
>ZFIN|ZDB-GENE-030131-6611 [details] [associations]
symbol:wu:fk48d07 "wu:fk48d07" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-6611 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 OMA:HIDPARF EMBL:CR391937 IPI:IPI00901625
RefSeq:XP_001340860.1 UniGene:Dr.104819 UniGene:Dr.127773
Ensembl:ENSDART00000114495 GeneID:100007313 KEGG:dre:100007313
NextBio:20787456 Uniprot:E7F1G8
Length = 483
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 132/355 (37%), Positives = 203/355 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D++ +AK+G GK+ +++ L++ + + A+VL TRELA Q+
Sbjct: 114 IQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDYIQAIVLVPTRELALQVS 173
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKN 119
S +L IKV GG N++ D+++ +E +++ TPGRIL L + +
Sbjct: 174 QISINMSKHLGGIKVMATTGGTNLR--DDIMRLDEIVHVIIATPGRILDLIKKGVAKVDK 231
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
V+ ++DE DK+L S D +++I P +Q++++SAT ++ K +Q P EI
Sbjct: 232 VQMAVMDEADKLL-SQDFVVLIEDIISFLPKKRQILLYSATFPISVQKFMTKHLQKPYEI 290
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
+ DE LTL G+ Q+Y ++E +K LN L L NQ +IF S R L K + +
Sbjct: 291 NLMDE--LTLKGITQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQ 348
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+ IH+ M QE R + F+ G R LV TDL RGIDI+ VN+VIN+D P +A+
Sbjct: 349 LGYSCFYIHAKMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAE 408
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
TYLHR+GR+GR+G GLAI ++S D L ++ + DIK +P ID S Y+
Sbjct: 409 TYLHRIGRSGRYGHLGLAINLITS-EDRFNLKGIEDQLMTDIKPIPSSIDKSLYV 462
>ZFIN|ZDB-GENE-040120-6 [details] [associations]
symbol:eif4a1b "eukaryotic translation initiation
factor 4A, isoform 1B" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040120-6 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 OrthoDB:EOG4640C1 EMBL:BC153507
IPI:IPI00509685 UniGene:Dr.104803 ProteinModelPortal:A8E590
SMR:A8E590 STRING:A8E590 ArrayExpress:A8E590 Uniprot:A8E590
Length = 429
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 135/349 (38%), Positives = 198/349 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I I G DVI QA+SG GKTA F +S LQQ + ALVL TRELA QI
Sbjct: 81 IQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIDIELKGTQALVLAPTRELAQQIQ 140
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
Y+ A GG N++ L+ E P IVVGTPGR+ + K LS K +
Sbjct: 141 KVILALGDYMGATCHACI-GGTNVRNEVQKLQAEAPHIVVGTPGRVYDMLNRKFLSSKYI 199
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ F+LDE D+ML S + + EIF+ QV++ SAT+ E+ V KFM++P+ I
Sbjct: 200 KMFVLDEADEML-SRGFKDQIYEIFQKLSTSIQVVLLSATMPAEVLDVTTKFMREPVRIL 258
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V E +LTL G+ Q YI + + E K L DL + L Q VIF+ + + L + +
Sbjct: 259 VKKE-ELTLEGIRQFYINVEKEEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHA 317
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+F +H M Q++R + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + +
Sbjct: 318 RDFTVSALHGDMDQKDRDLIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRE 377
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
Y+HR+GR GRFG KG+AI V+ D L ++ + ++E+P +
Sbjct: 378 NYIHRIGRGGRFGRKGVAINMVTE-DDKRTLRDIETFYNTTVEEMPMNV 425
>TAIR|locus:2127043 [details] [associations]
symbol:RH8 "RNAhelicase-like 8" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0016032 "viral reproduction" evidence=IMP] [GO:0019048
"virus-host interaction" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0019048 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006417
GO:GO:0006397 GO:GO:0003723 EMBL:AF058919 EMBL:AL161472
GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
KO:K12614 InterPro:IPR014014 PROSITE:PS51195 OMA:QFMEKHL
ProtClustDB:CLSN2683443 EMBL:AJ010460 EMBL:AY080837 EMBL:AY113985
IPI:IPI00531108 PIR:T01230 PIR:T51741 RefSeq:NP_191975.2
RefSeq:NP_849535.1 UniGene:At.25593 UniGene:At.67100
UniGene:At.71300 ProteinModelPortal:Q8RXK6 SMR:Q8RXK6 STRING:Q8RXK6
PaxDb:Q8RXK6 PRIDE:Q8RXK6 EnsemblPlants:AT4G00660.1
EnsemblPlants:AT4G00660.2 GeneID:828042 KEGG:ath:AT4G00660
GeneFarm:919 TAIR:At4g00660 InParanoid:Q8RXK6 PhylomeDB:Q8RXK6
Genevestigator:Q8RXK6 GermOnline:AT4G00660 Uniprot:Q8RXK6
Length = 505
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 133/354 (37%), Positives = 203/354 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D++ +AK+G GKTA F + L++ + + + A+++ TRELA Q
Sbjct: 157 IQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQAVIIVPTRELALQTS 216
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKN 119
+ +L I+V V GG ++K D+++ P ++VGTPGRIL L + LK+
Sbjct: 217 QVCKELGKHLK-IQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKD 273
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
++DE DK+L S + + V+ + P +Q++MFSAT ++ +F+ +P I
Sbjct: 274 CSVLVMDEADKLL-SQEFQPSVEHLISFLPESRQILMFSATFPVTVKDFKDRFLTNPYVI 332
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
+ DE LTL G+ Q Y + E +K LN L L NQ +IF SV+R L K + E
Sbjct: 333 NLMDE--LTLKGITQFYAFVEERQKIHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITE 390
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+ IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P +A+
Sbjct: 391 LGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAE 450
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTY 353
TYLHRVGR+GRFG GLA+ ++ D L +++ +IK++P ID + Y
Sbjct: 451 TYLHRVGRSGRFGHLGLAVNLITY-EDRFNLYRIEQELGTEIKQIPPHIDQAIY 503
>FB|FBgn0004419 [details] [associations]
symbol:me31B "maternal expression at 31B" species:7227
"Drosophila melanogaster" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IDA] [GO:0033962 "cytoplasmic mRNA
processing body assembly" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007095 "mitotic G2 DNA damage checkpoint"
evidence=IGI] [GO:0043186 "P granule" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005875 GO:GO:0007095 EMBL:AE014134 GO:GO:0003723
GO:GO:0000932 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033962 GO:GO:0004004 eggNOG:COG0513
GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 EMBL:M59926 EMBL:AY051663
PIR:A39157 RefSeq:NP_523533.2 RefSeq:NP_723539.1 UniGene:Dm.2770
ProteinModelPortal:P23128 SMR:P23128 IntAct:P23128 MINT:MINT-769276
STRING:P23128 PaxDb:P23128 PRIDE:P23128 EnsemblMetazoa:FBtr0079975
GeneID:34364 KEGG:dme:Dmel_CG4916 CTD:34364 FlyBase:FBgn0004419
InParanoid:P23128 OrthoDB:EOG45QFVG PhylomeDB:P23128 ChiTaRS:me31B
GenomeRNAi:34364 NextBio:788139 Bgee:P23128 GermOnline:CG4916
Uniprot:P23128
Length = 459
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 133/355 (37%), Positives = 204/355 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q IP A+ G DV+ +AK+G GKT + + L+Q +P + ALV+ TRELA Q
Sbjct: 84 IQEAAIPIALSGKDVLARAKNGTGKTGAYCIPVLEQIDPTKDYIQALVMVPTRELALQTS 143
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKN 119
+ +L DI+V V GG +K D+L+ + Q+++ TPGRIL L K + +
Sbjct: 144 QICIELAKHL-DIRVMVTTGGTILK--DDILRIYQKVQLIIATPGRILDLMDKKVADMSH 200
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
R +LDE DK+L SLD + + + P D Q+++FSAT ++ +K +++P EI
Sbjct: 201 CRILVLDEADKLL-SLDFQGMLDHVILKLPKDPQILLFSATFPLTVKNFMEKHLREPYEI 259
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
+ +E LTL G+ Q+Y + E +K LN L L NQ +IF S R L K + E
Sbjct: 260 NLMEE--LTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRVELLAKKITE 317
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+ IH+ M+Q R + F++G R LV +DL RGID++ VN+VIN+D P A+
Sbjct: 318 LGYCCYYIHAKMAQAHRNRVFHDFRQGLCRNLVCSDLFTRGIDVQAVNVVINFDFPRMAE 377
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
TYLHR+GR+GRFG G+AI ++ D L++++ +IK +P+ ID + Y+
Sbjct: 378 TYLHRIGRSGRFGHLGIAINLITYEDRFD-LHRIEKELGTEIKPIPKVIDPALYV 431
>UNIPROTKB|I3LLD5 [details] [associations]
symbol:I3LLD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 Ensembl:ENSSSCT00000032168 OMA:SKRERIM
Uniprot:I3LLD5
Length = 401
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 133/346 (38%), Positives = 195/346 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI
Sbjct: 58 IQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQ 117
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
Y+ GG N++ L+ E P I+VGTPGR+ + + LS K +
Sbjct: 118 KVVMALGDYM-GASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYI 176
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ F+LDE D+ML S + + +IF+ + QV++ SAT+ ++ V KKFM+DP+ I
Sbjct: 177 KMFVLDEADEML-SRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRIX 235
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
LTL G+ Q YI + E K L DL + L Q VIF+ + + L + +
Sbjct: 236 ------LTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHA 289
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + +
Sbjct: 290 RDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRE 349
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELP 345
Y+HR+GR GRFG KG+AI V+ D L ++ + I+E+P
Sbjct: 350 NYIHRIGRGGRFGRKGVAINMVTE-EDKRTLRDIETFYNTSIEEMP 394
>DICTYBASE|DDB_G0291804 [details] [associations]
symbol:ddx6 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0291804 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006397 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
EMBL:AAFI02000185 RefSeq:XP_629938.1 HSSP:P39517
ProteinModelPortal:Q54E49 SMR:Q54E49 PRIDE:Q54E49
EnsemblProtists:DDB0234196 GeneID:8628344 KEGG:ddi:DDB_G0291804
OMA:QFMEKHL ProtClustDB:CLSZ2429504 Uniprot:Q54E49
Length = 423
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 131/354 (37%), Positives = 204/354 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + IP A+ G D++ +AK+G GKTA F++ L++T+P + L+L TRELA Q
Sbjct: 75 IQEKAIPIALAGRDIMARAKNGTGKTASFLIPALEKTDPTKDVIQVLILVPTRELALQTS 134
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKN 119
+ Y+ +++V GG ++K D+++ P I+V TPGR+L LA+ +L N
Sbjct: 135 QVCKELGKYM-NVQVMASTGGTSLK--DDIMRLYNPVHILVATPGRVLDLAQKNVANLSN 191
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
I+DE DK+L S + + V+++ P +Q+++FSAT ++ + ++Q EI
Sbjct: 192 CHTMIMDEADKLL-SQEFQPLVEQLINFLPQQRQILLFSATFPVTVKSFKEHYLQQAFEI 250
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
+ +E LTL G+ Q+Y + E +K LN L L NQ +IF SV+R L K + E
Sbjct: 251 NLMEE--LTLKGVTQYYAFVEERQKIHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITE 308
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+ IH+ M Q R + F+ G R LV++DL RGIDI+ VN+VIN+D P ++
Sbjct: 309 LGYSCFFIHAKMVQAHRNRVFHDFRNGACRNLVSSDLFTRGIDIQDVNVVINFDFPKHSE 368
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTY 353
TYLHR+GR+GRFG GLAI ++ D L +++ +IK +P ID S Y
Sbjct: 369 TYLHRIGRSGRFGHLGLAINLITY-EDRFSLYKIEQELGTEIKPIPPVIDKSLY 421
>DICTYBASE|DDB_G0269192 [details] [associations]
symbol:tifA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0269192 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
KO:K13025 OMA:LALGDFM RefSeq:XP_646270.1 ProteinModelPortal:Q55D61
SMR:Q55D61 PRIDE:Q55D61 EnsemblProtists:DDB0191511 GeneID:8617226
KEGG:ddi:DDB_G0269192 Uniprot:Q55D61
Length = 405
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 129/347 (37%), Positives = 204/347 (58%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I I G D I QA+SG GKTA F + LQ E N L+L TRELA QI
Sbjct: 58 IQQRAILPIIKGRDTIAQAQSGTGKTATFSIGALQCVEVNVRSPQVLILSPTRELAQQIQ 117
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKN 119
S ++ +I+V GG N+ D+ K E IV GTPGR+L + K L ++
Sbjct: 118 KVALALSEFM-NIQVHACVGGKNLS--DDVKKLETGVHIVSGTPGRVLDMITRKSLPTRH 174
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
++ ILDE D+ML SL ++ + ++++ P+ Q+++ SATL++++ + +KFM P+ I
Sbjct: 175 IKMMILDEADEML-SLGFQQQINDVYRYLPNGTQIVLVSATLTQDVVSMTEKFMTKPVRI 233
Query: 180 YVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
+ + +LTL G+ Q ++ + + + K L D+ D+L Q VIF + + +L + +
Sbjct: 234 LLKRD-ELTLDGIKQFFVSVEKEDWKFGTLCDIYDSLTITQAVIFCNTKKKVDQLTEQMR 292
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
+ NF +H M Q+ER K F+ G R+L+ TD++ RGID+++V++VINYD+P
Sbjct: 293 DANFTVASMHGDMVQKEREEIIKSFRSGENRVLITTDILARGIDVQQVSLVINYDLPIDR 352
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELP 345
+ Y+HR+GR+GRFG KG+AI FV + SD IL ++ + I E+P
Sbjct: 353 ENYIHRIGRSGRFGRKGVAINFVKN-SDIRILRDIEQFYSTQIDEMP 398
>GENEDB_PFALCIPARUM|PF14_0655 [details] [associations]
symbol:PF14_0655 "RNA helicase-1, putative"
species:5833 "Plasmodium falciparum" [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0000339 "RNA cap binding" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 134/350 (38%), Positives = 204/350 (58%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I + G D I QA+SG GKTA FV+S+LQ + AL+L TRELA QI
Sbjct: 49 IQQRGIKPILNGYDTIGQAQSGTGKTATFVISSLQLINYDYVACQALILAPTRELAQQIQ 108
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
YL +K GG ++ D LK +VVGTPGR+ + + L + +
Sbjct: 109 KVVLALGDYLK-VKCHACVGGTVVREDIDKLKQGV-HMVVGTPGRVYDMIDKRHLGVDRL 166
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ FILDE D+ML S + + E+FK D QV +FSAT+ +EI + +FM+DP I
Sbjct: 167 KLFILDEADEML-SRGFKAQIYEVFKKLVPDIQVALFSATMPQEILELTTRFMRDPKTIL 225
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V + +LTL G+ Q Y+ + + E K L DL + L Q +I+ + + L + +
Sbjct: 226 VKKD-ELTLEGIRQFYVAVEKEEWKLDTLCDLYETLTITQSIIYCNTRKKVDILTQEMHN 284
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
F C+H M Q++R + F+ G+ R+LV TDL+ RGID+++V++VINYD+P S D
Sbjct: 285 RLFTVSCMHGDMDQKDRDLIMREFRSGSTRVLVTTDLLARGIDVQQVSLVINYDLPASPD 344
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSAS-DSDILNQVQARFEVDIKELPEQI 348
TY+HR+GR+GRFG KG+AI FV++ + D L ++++ + I+E+P ++
Sbjct: 345 TYIHRIGRSGRFGRKGVAINFVTNDDKEKDKLKKIESYYSTQIEEMPLEV 394
>UNIPROTKB|Q8IKF0 [details] [associations]
symbol:H45 "Helicase 45" species:36329 "Plasmodium
falciparum 3D7" [GO:0006446 "regulation of translational
initiation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 134/350 (38%), Positives = 204/350 (58%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I + G D I QA+SG GKTA FV+S+LQ + AL+L TRELA QI
Sbjct: 49 IQQRGIKPILNGYDTIGQAQSGTGKTATFVISSLQLINYDYVACQALILAPTRELAQQIQ 108
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
YL +K GG ++ D LK +VVGTPGR+ + + L + +
Sbjct: 109 KVVLALGDYLK-VKCHACVGGTVVREDIDKLKQGV-HMVVGTPGRVYDMIDKRHLGVDRL 166
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ FILDE D+ML S + + E+FK D QV +FSAT+ +EI + +FM+DP I
Sbjct: 167 KLFILDEADEML-SRGFKAQIYEVFKKLVPDIQVALFSATMPQEILELTTRFMRDPKTIL 225
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V + +LTL G+ Q Y+ + + E K L DL + L Q +I+ + + L + +
Sbjct: 226 VKKD-ELTLEGIRQFYVAVEKEEWKLDTLCDLYETLTITQSIIYCNTRKKVDILTQEMHN 284
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
F C+H M Q++R + F+ G+ R+LV TDL+ RGID+++V++VINYD+P S D
Sbjct: 285 RLFTVSCMHGDMDQKDRDLIMREFRSGSTRVLVTTDLLARGIDVQQVSLVINYDLPASPD 344
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSAS-DSDILNQVQARFEVDIKELPEQI 348
TY+HR+GR+GRFG KG+AI FV++ + D L ++++ + I+E+P ++
Sbjct: 345 TYIHRIGRSGRFGRKGVAINFVTNDDKEKDKLKKIESYYSTQIEEMPLEV 394
>ASPGD|ASPL0000014018 [details] [associations]
symbol:fal1 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:BN001302 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
EMBL:AACD01000139 KO:K13025 RefSeq:XP_681285.1
ProteinModelPortal:Q5AUL4 SMR:Q5AUL4 PRIDE:Q5AUL4
EnsemblFungi:CADANIAT00004036 GeneID:2869287 KEGG:ani:AN8016.2
OMA:EDWKFDT OrthoDB:EOG4HTD1W Uniprot:Q5AUL4
Length = 399
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 131/350 (37%), Positives = 203/350 (58%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I Q G D I QA+SG GKTA F +S LQ + + ALVL TRELA QI
Sbjct: 51 VQSRAIVQICKGRDTIAQAQSGTGKTATFSISALQVIDTVVRETQALVLSPTRELATQIQ 110
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVV-GTPGRILALARDKDLSLKN 119
Y+ +++ GG NI +D+ K + Q VV GTPGR+ + R + L ++
Sbjct: 111 SVIMALGDYM-NVQCHACIGGTNIG--EDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRH 167
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
++ +LDE D++L R + ++++ P QV++ SATL ++ + KFM DP+ +
Sbjct: 168 IKMLVLDEADELLNR-GFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRV 226
Query: 180 YVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
V + +LTL G+ Q++I + + E K L DL D L Q VIF + + L +
Sbjct: 227 LVKRD-ELTLEGIKQYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMR 285
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
E NF +H M Q+ER + + F++GN R+L++TD+ RGID+++V++VINYD+P +
Sbjct: 286 EANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNR 345
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
+ Y+HR+GR+GRFG KG+AI FV+S D IL ++ + I E+P +
Sbjct: 346 ENYIHRIGRSGRFGRKGVAINFVTS-DDVRILRDIELYYSTQIDEMPMNV 394
>GENEDB_PFALCIPARUM|PFC0915w [details] [associations]
symbol:PFC0915w "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006200 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844502 HOGENOM:HOG000268797 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
ProtClustDB:CLSZ2429504 RefSeq:XP_001351278.1
ProteinModelPortal:O97285 SMR:O97285 EnsemblProtists:PFC0915w:mRNA
GeneID:814522 KEGG:pfa:PFC0915w EuPathDB:PlasmoDB:PF3D7_0320800
Uniprot:O97285
Length = 433
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 130/355 (36%), Positives = 207/355 (58%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G +++ +AK+G GKTA F + L++ + + L+L TRELA Q
Sbjct: 86 IQEESIPVALAGKNILARAKNGTGKTAAFAIPLLEKCNTHKNFIQGLILVPTRELALQTS 145
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLS-LK 118
+ ++ ++ V GG +++ +D+++ I+ GTPGRIL LA +KD++ L
Sbjct: 146 AMIKELGKHMK-VQCMVTTGGTSLR--EDIMRLYNVVHILCGTPGRILDLA-NKDVANLS 201
Query: 119 NVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPME 178
++DE DK+L S + + V+E+ K P +KQ++M+SAT ++ ++ D E
Sbjct: 202 GCHIMVMDEADKLL-SPEFQPIVEELMKFLPKEKQILMYSATFPVTVKEFRAIYLSDAHE 260
Query: 179 IYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
I + DE LTL G+ Q+Y + E +K LN L L NQ +IF S++R L K +
Sbjct: 261 INLMDE--LTLKGITQYYAFVKERQKVHCLNTLFAKLQINQAIIFCNSITRVELLAKKIT 318
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
E + S IH+ MSQ R + F+ G R LV++DL RGIDI+ VN+VIN+D P ++
Sbjct: 319 ELGYSSFYIHARMSQTHRNRVFHDFRNGACRCLVSSDLFTRGIDIQSVNVVINFDFPKNS 378
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTY 353
+TYLHR+GR+GR+G GLAI ++ D L +++ +I+ +P +ID S Y
Sbjct: 379 ETYLHRIGRSGRYGHLGLAINLITF-EDRFNLYKIEVELGTEIQPIPNEIDPSLY 432
>UNIPROTKB|Q5ZKB9 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962 GO:GO:0008026
eggNOG:COG0513 GeneTree:ENSGT00530000063986 HOGENOM:HOG000268797
OMA:YSHARMK InterPro:IPR014014 PROSITE:PS51195 HSSP:P26196
EMBL:AJ720165 IPI:IPI00595692 UniGene:Gga.2331
ProteinModelPortal:Q5ZKB9 SMR:Q5ZKB9 Ensembl:ENSGALT00000012405
HOVERGEN:HBG106685 InParanoid:Q5ZKB9 OrthoDB:EOG4J1182
ArrayExpress:Q5ZKB9 Uniprot:Q5ZKB9
Length = 483
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 127/355 (35%), Positives = 204/355 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D++ +AK+G GK+ +++ L++ + + A+V+ TRELA Q+
Sbjct: 122 IQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVS 181
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKN 119
+ S ++ KV GG N++ D+++ ++ +V+ TPGRIL L + +++
Sbjct: 182 QICIQVSKHMGGAKVMATTGGTNLR--DDIMRLDDTVHVVIATPGRILDLIKKGVAKVEH 239
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
V+ +LDE DK+L S D + +++I P ++Q++++SAT ++ +Q P EI
Sbjct: 240 VQMIVLDEADKLL-SQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEI 298
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
+ +E LTL G+ Q+Y ++E +K LN L L NQ +IF S R L K + +
Sbjct: 299 NLMEE--LTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQ 356
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+ IH+ M QE R + F+ G R LV TDL RGIDI+ VN+VIN+D P A+
Sbjct: 357 LGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAE 416
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
TYLHR+GR+GRFG GLAI ++ D L ++ + +IK +P ID S Y+
Sbjct: 417 TYLHRIGRSGRFGHLGLAINLITY-DDRFNLKSIEEQLGTEIKPIPSNIDKSLYV 470
>UNIPROTKB|Q5ZM36 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0006417 GO:GO:0000184 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:AJ719548 IPI:IPI00588271
RefSeq:NP_001025820.1 UniGene:Gga.7844 ProteinModelPortal:Q5ZM36
SMR:Q5ZM36 PRIDE:Q5ZM36 GeneID:416704 KEGG:gga:416704
InParanoid:Q5ZM36 NextBio:20820126 Uniprot:Q5ZM36
Length = 412
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 127/350 (36%), Positives = 200/350 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I Q I G DVI Q++SG GKTA F +S LQ + + AL+L TRELA QI
Sbjct: 65 IQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQ 124
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQ-IVVGTPGRILALARDKDLSLKN 119
Y+ +++ GG N+ +D+ K + Q +V GTPGR+ + R + L +
Sbjct: 125 KGLLALGDYM-NVQCHACIGGTNVG--EDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA 181
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
++ +LDE D+ML + + ++++ P QV++ SATL EI + KFM DP+ I
Sbjct: 182 IKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI 240
Query: 180 YVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
V + +LTL G+ Q ++ + E K L DL D L Q VIF + + L + +
Sbjct: 241 LVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMR 299
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
E NF +H M Q+ER + K F+ G R+L++TD+ RG+D+ +V+++INYD+P++
Sbjct: 300 EANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNR 359
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
+ Y+HR+GR+GR+G KG+AI FV + D IL ++ + I E+P +
Sbjct: 360 ELYIHRIGRSGRYGRKGVAINFVKN-DDIRILRDIEQYYSTQIDEMPMNV 408
>UNIPROTKB|Q2NL22 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0008380 GO:GO:0017148 GO:GO:0016607 GO:GO:0006397
GO:GO:0045727 GO:GO:0051028 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
GO:GO:0035145 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K13025 EMBL:BC111184
IPI:IPI00708766 RefSeq:NP_001039653.1 UniGene:Bt.3377
ProteinModelPortal:Q2NL22 SMR:Q2NL22 PRIDE:Q2NL22
Ensembl:ENSBTAT00000021327 GeneID:515145 KEGG:bta:515145 CTD:9775
InParanoid:Q2NL22 OMA:LALGDFM OrthoDB:EOG4229JV NextBio:20871682
Uniprot:Q2NL22
Length = 411
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 127/350 (36%), Positives = 200/350 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I Q I G DVI Q++SG GKTA F +S LQ + + AL+L TRELA QI
Sbjct: 64 IQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQ 123
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQ-IVVGTPGRILALARDKDLSLKN 119
Y+ +++ GG N+ +D+ K + Q +V GTPGR+ + R + L +
Sbjct: 124 KGLLALGDYM-NVQCHACIGGTNVG--EDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA 180
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
++ +LDE D+ML + + ++++ P QV++ SATL EI + KFM DP+ I
Sbjct: 181 IKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI 239
Query: 180 YVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
V + +LTL G+ Q ++ + E K L DL D L Q VIF + + L + +
Sbjct: 240 LVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMR 298
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
E NF +H M Q+ER + K F+ G R+L++TD+ RG+D+ +V+++INYD+P++
Sbjct: 299 EANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNR 358
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
+ Y+HR+GR+GR+G KG+AI FV + D IL ++ + I E+P +
Sbjct: 359 ELYIHRIGRSGRYGRKGVAINFVKN-DDIRILRDIEQYYSTQIDEMPMNV 407
>UNIPROTKB|E2RDZ4 [details] [associations]
symbol:EIF4A3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0017148
"negative regulation of translation" evidence=IEA] [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT CTD:9775
EMBL:AAEX03006203 RefSeq:XP_533130.2 Ensembl:ENSCAFT00000009055
GeneID:475922 KEGG:cfa:475922 NextBio:20851666 Uniprot:E2RDZ4
Length = 411
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 127/350 (36%), Positives = 200/350 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I Q I G DVI Q++SG GKTA F +S LQ + + AL+L TRELA QI
Sbjct: 64 IQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQ 123
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQ-IVVGTPGRILALARDKDLSLKN 119
Y+ +++ GG N+ +D+ K + Q +V GTPGR+ + R + L +
Sbjct: 124 KGLLALGDYM-NVQCHACIGGTNVG--EDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA 180
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
++ +LDE D+ML + + ++++ P QV++ SATL EI + KFM DP+ I
Sbjct: 181 IKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI 239
Query: 180 YVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
V + +LTL G+ Q ++ + E K L DL D L Q VIF + + L + +
Sbjct: 240 LVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMR 298
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
E NF +H M Q+ER + K F+ G R+L++TD+ RG+D+ +V+++INYD+P++
Sbjct: 299 EANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNR 358
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
+ Y+HR+GR+GR+G KG+AI FV + D IL ++ + I E+P +
Sbjct: 359 ELYIHRIGRSGRYGRKGVAINFVKN-DDIRILRDIEQYYSTQIDEMPMNV 407
>UNIPROTKB|P38919 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048026 "positive
regulation of mRNA splicing, via spliceosome" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0045727 "positive regulation
of translation" evidence=IMP] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IDA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_6900 GO:GO:0000184 GO:GO:0017148
GO:GO:0016607 GO:GO:0019221 TCDB:3.A.18.1.1 EMBL:CH471099
GO:GO:0045727 GO:GO:0051028 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000289 EMBL:AC087741 GO:GO:0035145 PDB:2HYI
PDB:2J0Q PDB:2J0S PDB:2J0U PDB:2XB2 PDB:3EX7 PDBsum:2HYI
PDBsum:2J0Q PDBsum:2J0S PDBsum:2J0U PDBsum:2XB2 PDBsum:3EX7
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989 KO:K13025
OMA:EDWKFDT CTD:9775 OrthoDB:EOG4229JV EMBL:X79538 EMBL:D21853
EMBL:AK290608 EMBL:CR456750 EMBL:BC003662 EMBL:BC004386
EMBL:BC011151 IPI:IPI00009328 PIR:S45142 RefSeq:NP_055555.1
UniGene:Hs.389649 PDB:2HXY PDBsum:2HXY ProteinModelPortal:P38919
SMR:P38919 DIP:DIP-33218N IntAct:P38919 MINT:MINT-1460615
STRING:P38919 PhosphoSite:P38919 DMDM:20532400
REPRODUCTION-2DPAGE:IPI00009328 PaxDb:P38919 PeptideAtlas:P38919
PRIDE:P38919 DNASU:9775 Ensembl:ENST00000269349 GeneID:9775
KEGG:hsa:9775 UCSC:uc002jxs.3 GeneCards:GC17M078109 HGNC:HGNC:18683
HPA:HPA021878 MIM:608546 neXtProt:NX_P38919 PharmGKB:PA162384945
InParanoid:P38919 PhylomeDB:P38919 ChiTaRS:EIF4A3
EvolutionaryTrace:P38919 GenomeRNAi:9775 NextBio:36802 Bgee:P38919
CleanEx:HS_EIF4A3 Genevestigator:P38919 GermOnline:ENSG00000141543
Uniprot:P38919
Length = 411
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 127/350 (36%), Positives = 200/350 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I Q I G DVI Q++SG GKTA F +S LQ + + AL+L TRELA QI
Sbjct: 64 IQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQ 123
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQ-IVVGTPGRILALARDKDLSLKN 119
Y+ +++ GG N+ +D+ K + Q +V GTPGR+ + R + L +
Sbjct: 124 KGLLALGDYM-NVQCHACIGGTNVG--EDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA 180
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
++ +LDE D+ML + + ++++ P QV++ SATL EI + KFM DP+ I
Sbjct: 181 IKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI 239
Query: 180 YVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
V + +LTL G+ Q ++ + E K L DL D L Q VIF + + L + +
Sbjct: 240 LVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMR 298
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
E NF +H M Q+ER + K F+ G R+L++TD+ RG+D+ +V+++INYD+P++
Sbjct: 299 EANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNR 358
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
+ Y+HR+GR+GR+G KG+AI FV + D IL ++ + I E+P +
Sbjct: 359 ELYIHRIGRSGRYGRKGVAINFVKN-DDIRILRDIEQYYSTQIDEMPMNV 407
>UNIPROTKB|A6M931 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:DQ351286 RefSeq:NP_001093663.1
UniGene:Ssc.869 ProteinModelPortal:A6M931 SMR:A6M931 PRIDE:A6M931
GeneID:100101926 KEGG:ssc:100101926 Uniprot:A6M931
Length = 411
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 127/350 (36%), Positives = 200/350 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I Q I G DVI Q++SG GKTA F +S LQ + + AL+L TRELA QI
Sbjct: 64 IQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQ 123
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQ-IVVGTPGRILALARDKDLSLKN 119
Y+ +++ GG N+ +D+ K + Q +V GTPGR+ + R + L +
Sbjct: 124 KGLLALGDYM-NVQCHACIGGTNVG--EDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA 180
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
++ +LDE D+ML + + ++++ P QV++ SATL EI + KFM DP+ I
Sbjct: 181 IKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI 239
Query: 180 YVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
V + +LTL G+ Q ++ + E K L DL D L Q VIF + + L + +
Sbjct: 240 LVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMR 298
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
E NF +H M Q+ER + K F+ G R+L++TD+ RG+D+ +V+++INYD+P++
Sbjct: 299 EANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNR 358
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
+ Y+HR+GR+GR+G KG+AI FV + D IL ++ + I E+P +
Sbjct: 359 ELYIHRIGRSGRYGRKGVAINFVKN-DDIRILRDIEQYYSTQIDEMPMNV 407
>RGD|1591139 [details] [associations]
symbol:Eif4a3 "eukaryotic translation initiation factor 4A,
isoform 3" species:10116 "Rattus norvegicus" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0045727
"positive regulation of translation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1591139 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
EMBL:CH473948 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P60842 KO:K13025 CTD:9775 EMBL:BC105875
IPI:IPI00656385 RefSeq:NP_001093628.1 UniGene:Rn.202617
ProteinModelPortal:Q3B8Q2 SMR:Q3B8Q2 PRIDE:Q3B8Q2 GeneID:688288
KEGG:rno:688288 NextBio:736113 Genevestigator:Q3B8Q2 Uniprot:Q3B8Q2
Length = 411
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 127/350 (36%), Positives = 200/350 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I Q I G DVI Q++SG GKTA F +S LQ + + AL+L TRELA QI
Sbjct: 64 IQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQ 123
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQ-IVVGTPGRILALARDKDLSLKN 119
Y+ +++ GG N+ +D+ K + Q +V GTPGR+ + R + L +
Sbjct: 124 KGLLALGDYM-NVQCHACIGGTNVG--EDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA 180
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
++ +LDE D+ML + + ++++ P QV++ SATL EI + KFM DP+ I
Sbjct: 181 IKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI 239
Query: 180 YVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
V + +LTL G+ Q ++ + E K L DL D L Q VIF + + L + +
Sbjct: 240 LVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMR 298
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
E NF +H M Q+ER + K F+ G R+L++TD+ RG+D+ +V+++INYD+P++
Sbjct: 299 EANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNR 358
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
+ Y+HR+GR+GR+G KG+AI FV + D IL ++ + I E+P +
Sbjct: 359 ELYIHRIGRSGRYGRKGVAINFVKN-DDIRILRDIEQYYSTQIDEMPMNV 407
>UNIPROTKB|E1BDM8 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:DAAA02040478
EMBL:DAAA02040479 IPI:IPI00697295 RefSeq:NP_001137339.1
UniGene:Bt.12357 PRIDE:E1BDM8 Ensembl:ENSBTAT00000011952
GeneID:513906 KEGG:bta:513906 NextBio:20871085 Uniprot:E1BDM8
Length = 483
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 127/355 (35%), Positives = 203/355 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D++ +AK+G GK+ +++ L++ + + A+V+ TRELA Q+
Sbjct: 122 IQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVS 181
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKN 119
+ S ++ KV GG N++ D+++ ++ +V+ TPGRIL L + + +
Sbjct: 182 QICIQVSKHMGGAKVMATTGGTNLR--DDIMRLDDTVHVVIATPGRILDLIKKGVAKVDH 239
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
V+ +LDE DK+L S D + +++I P ++Q++++SAT ++ +Q P EI
Sbjct: 240 VQMIVLDEADKLL-SQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEI 298
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
+ +E LTL G+ Q+Y ++E +K LN L L NQ +IF S R L K + +
Sbjct: 299 NLMEE--LTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQ 356
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+ IH+ M QE R + F+ G R LV TDL RGIDI+ VN+VIN+D P A+
Sbjct: 357 LGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAE 416
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
TYLHR+GR+GRFG GLAI ++ D L ++ + +IK +P ID S Y+
Sbjct: 417 TYLHRIGRSGRFGHLGLAINLITY-DDRFNLKSIEEQLGTEIKPIPSNIDKSLYV 470
>UNIPROTKB|E2RR01 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:AAEX03003444
RefSeq:XP_849975.1 Ensembl:ENSCAFT00000019743 GeneID:479414
KEGG:cfa:479414 NextBio:20854600 Uniprot:E2RR01
Length = 483
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 127/355 (35%), Positives = 203/355 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D++ +AK+G GK+ +++ L++ + + A+V+ TRELA Q+
Sbjct: 122 IQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVS 181
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKN 119
+ S ++ KV GG N++ D+++ ++ +V+ TPGRIL L + + +
Sbjct: 182 QICIQVSKHMGGAKVMATTGGTNLR--DDIMRLDDTVHVVIATPGRILDLIKKGVAKVDH 239
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
V+ +LDE DK+L S D + +++I P ++Q++++SAT ++ +Q P EI
Sbjct: 240 VQMIVLDEADKLL-SQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEI 298
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
+ +E LTL G+ Q+Y ++E +K LN L L NQ +IF S R L K + +
Sbjct: 299 NLMEE--LTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQ 356
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+ IH+ M QE R + F+ G R LV TDL RGIDI+ VN+VIN+D P A+
Sbjct: 357 LGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAE 416
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
TYLHR+GR+GRFG GLAI ++ D L ++ + +IK +P ID S Y+
Sbjct: 417 TYLHRIGRSGRFGHLGLAINLITY-DDRFNLKSIEEQLGTEIKPIPSNIDKSLYV 470
>UNIPROTKB|P26196 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0004386 "helicase activity" evidence=TAS]
[GO:0003724 "RNA helicase activity" evidence=TAS] [GO:0016442
"RNA-induced silencing complex" evidence=IDA] [GO:0033962
"cytoplasmic mRNA processing body assembly" evidence=IDA]
[GO:0000288 "nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0043928 "exonucleolytic
nuclear-transcribed mRNA catabolic process involved in
deadenylation-dependent decay" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
GO:GO:0010467 GO:GO:0003723 GO:GO:0000932 GO:GO:0016442
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0033962 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
KO:K12614 OMA:YSHARMK GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043928 HOVERGEN:HBG106685 OrthoDB:EOG4J1182
EMBL:Z11685 EMBL:BC065007 EMBL:D17532 IPI:IPI00030320 PIR:S22651
RefSeq:NP_001244120.1 RefSeq:NP_004388.2 UniGene:Hs.408461 PDB:1VEC
PDB:2WAX PDB:2WAY PDBsum:1VEC PDBsum:2WAX PDBsum:2WAY
ProteinModelPortal:P26196 SMR:P26196 DIP:DIP-29195N IntAct:P26196
STRING:P26196 PhosphoSite:P26196 DMDM:116241327
DOSAC-COBS-2DPAGE:P26196 PaxDb:P26196 PeptideAtlas:P26196
PRIDE:P26196 DNASU:1656 Ensembl:ENST00000264018
Ensembl:ENST00000526070 Ensembl:ENST00000534980 GeneID:1656
KEGG:hsa:1656 UCSC:uc001pub.2 CTD:1656 GeneCards:GC11M118654
HGNC:HGNC:2747 HPA:CAB004668 HPA:HPA024201 HPA:HPA026644 MIM:600326
neXtProt:NX_P26196 PharmGKB:PA27229 InParanoid:P26196
PhylomeDB:P26196 ChiTaRS:DDX6 EvolutionaryTrace:P26196
GenomeRNAi:1656 NextBio:6820 ArrayExpress:P26196 Bgee:P26196
CleanEx:HS_DDX6 Genevestigator:P26196 GermOnline:ENSG00000110367
Uniprot:P26196
Length = 483
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 127/355 (35%), Positives = 203/355 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D++ +AK+G GK+ +++ L++ + + A+V+ TRELA Q+
Sbjct: 122 IQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVS 181
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKN 119
+ S ++ KV GG N++ D+++ ++ +V+ TPGRIL L + + +
Sbjct: 182 QICIQVSKHMGGAKVMATTGGTNLR--DDIMRLDDTVHVVIATPGRILDLIKKGVAKVDH 239
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
V+ +LDE DK+L S D + +++I P ++Q++++SAT ++ +Q P EI
Sbjct: 240 VQMIVLDEADKLL-SQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEI 298
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
+ +E LTL G+ Q+Y ++E +K LN L L NQ +IF S R L K + +
Sbjct: 299 NLMEE--LTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQ 356
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+ IH+ M QE R + F+ G R LV TDL RGIDI+ VN+VIN+D P A+
Sbjct: 357 LGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAE 416
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
TYLHR+GR+GRFG GLAI ++ D L ++ + +IK +P ID S Y+
Sbjct: 417 TYLHRIGRSGRFGHLGLAINLITY-DDRFNLKSIEEQLGTEIKPIPSNIDKSLYV 470
>UNIPROTKB|F1SAJ5 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:FP089499
RefSeq:XP_003129962.1 RefSeq:XP_003357372.1 UniGene:Ssc.97711
Ensembl:ENSSSCT00000016463 GeneID:100515499 KEGG:ssc:100515499
Uniprot:F1SAJ5
Length = 483
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 127/355 (35%), Positives = 203/355 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D++ +AK+G GK+ +++ L++ + + A+V+ TRELA Q+
Sbjct: 122 IQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVS 181
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKN 119
+ S ++ KV GG N++ D+++ ++ +V+ TPGRIL L + + +
Sbjct: 182 QICIQVSKHMGGAKVMATTGGTNLR--DDIMRLDDTVHVVIATPGRILDLIKKGVAKVDH 239
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
V+ +LDE DK+L S D + +++I P ++Q++++SAT ++ +Q P EI
Sbjct: 240 VQMIVLDEADKLL-SQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEI 298
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
+ +E LTL G+ Q+Y ++E +K LN L L NQ +IF S R L K + +
Sbjct: 299 NLMEE--LTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQ 356
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+ IH+ M QE R + F+ G R LV TDL RGIDI+ VN+VIN+D P A+
Sbjct: 357 LGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAE 416
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
TYLHR+GR+GRFG GLAI ++ D L ++ + +IK +P ID S Y+
Sbjct: 417 TYLHRIGRSGRFGHLGLAINLITY-DDRFNLKSIEEQLGTEIKPIPSNIDKSLYV 470
>MGI|MGI:104976 [details] [associations]
symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 6"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=ISO] [GO:0016442 "RNA-induced silencing complex"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:104976 GO:GO:0005524
GO:GO:0003723 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 KO:K12614 OMA:YSHARMK InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG106685 OrthoDB:EOG4J1182 CTD:1656
EMBL:D50494 EMBL:AK054144 EMBL:AK148483 EMBL:BC021452 EMBL:AF038995
IPI:IPI00109932 RefSeq:NP_001104296.1 RefSeq:NP_031867.1
RefSeq:NP_851841.2 UniGene:Mm.267061 ProteinModelPortal:P54823
SMR:P54823 IntAct:P54823 STRING:P54823 PhosphoSite:P54823
PaxDb:P54823 PRIDE:P54823 Ensembl:ENSMUST00000170489 GeneID:13209
KEGG:mmu:13209 UCSC:uc009pdy.2 InParanoid:P54823 NextBio:283376
Bgee:P54823 CleanEx:MM_DDX6 Genevestigator:P54823
GermOnline:ENSMUSG00000032097 Uniprot:P54823
Length = 483
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 127/355 (35%), Positives = 203/355 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D++ +AK+G GK+ +++ L++ + + A+V+ TRELA Q+
Sbjct: 122 IQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVS 181
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKN 119
+ S ++ KV GG N++ D+++ ++ +V+ TPGRIL L + + +
Sbjct: 182 QICIQVSKHMGGAKVMATTGGTNLR--DDIMRLDDTVHVVIATPGRILDLIKKGVAKVDH 239
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
V+ +LDE DK+L S D + +++I P ++Q++++SAT ++ +Q P EI
Sbjct: 240 VQMIVLDEADKLL-SQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEI 298
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
+ +E LTL G+ Q+Y ++E +K LN L L NQ +IF S R L K + +
Sbjct: 299 NLMEE--LTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQ 356
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+ IH+ M QE R + F+ G R LV TDL RGIDI+ VN+VIN+D P A+
Sbjct: 357 LGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAE 416
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
TYLHR+GR+GRFG GLAI ++ D L ++ + +IK +P ID S Y+
Sbjct: 417 TYLHRIGRSGRFGHLGLAINLITY-DDRFNLKSIEEQLGTEIKPIPSNIDKSLYV 470
>RGD|1564560 [details] [associations]
symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box helicase 6"
species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA;ISO] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA;ISO] [GO:0016442 "RNA-induced silencing
complex" evidence=IEA;ISO] [GO:0033962 "cytoplasmic mRNA processing
body assembly" evidence=IEA;ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1564560
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CH473975 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4J1182 CTD:1656
IPI:IPI00558056 RefSeq:NP_001102762.1 UniGene:Rn.231713
Ensembl:ENSRNOT00000017391 GeneID:500988 KEGG:rno:500988
UCSC:RGD:1564560 NextBio:707903 Uniprot:D3ZD73
Length = 483
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 127/355 (35%), Positives = 203/355 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D++ +AK+G GK+ +++ L++ + + A+V+ TRELA Q+
Sbjct: 122 IQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVS 181
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKN 119
+ S ++ KV GG N++ D+++ ++ +V+ TPGRIL L + + +
Sbjct: 182 QICIQVSKHMGGAKVMATTGGTNLR--DDIMRLDDTVHVVIATPGRILDLIKKGVAKVDH 239
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
V+ +LDE DK+L S D + +++I P ++Q++++SAT ++ +Q P EI
Sbjct: 240 VQMIVLDEADKLL-SQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEI 298
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
+ +E LTL G+ Q+Y ++E +K LN L L NQ +IF S R L K + +
Sbjct: 299 NLMEE--LTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQ 356
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+ IH+ M QE R + F+ G R LV TDL RGIDI+ VN+VIN+D P A+
Sbjct: 357 LGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAE 416
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
TYLHR+GR+GRFG GLAI ++ D L ++ + +IK +P ID S Y+
Sbjct: 417 TYLHRIGRSGRFGHLGLAINLITY-DDRFNLKSIEEQLGTEIKPIPSNIDKSLYV 470
>ZFIN|ZDB-GENE-040426-915 [details] [associations]
symbol:eif4a3 "eukaryotic translation initiation
factor 4A, isoform 3" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040426-915
GO:GO:0005524 GO:GO:0005737 GO:GO:0006417 GO:GO:0000184
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:BC045939 IPI:IPI00481285 RefSeq:NP_957372.1
UniGene:Dr.78203 ProteinModelPortal:Q7ZVA6 SMR:Q7ZVA6 STRING:Q7ZVA6
PRIDE:Q7ZVA6 GeneID:394053 KEGG:dre:394053 InParanoid:Q7ZVA6
NextBio:20815014 ArrayExpress:Q7ZVA6 Uniprot:Q7ZVA6
Length = 406
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 127/350 (36%), Positives = 199/350 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I Q I G DVI Q++SG GKTA F +S LQ + + AL+L TRELA QI
Sbjct: 59 IQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQ 118
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQ-IVVGTPGRILALARDKDLSLKN 119
Y+ +++ GG N+ +D+ K + Q +V GTPGR+ + R + L +
Sbjct: 119 KVLLALGDYM-NVQCHACIGGTNVG--EDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA 175
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
++ +LDE D+ML + + ++++ P QV + SATL EI + KFM DP+ I
Sbjct: 176 IKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRI 234
Query: 180 YVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
V + +LTL G+ Q ++ + E K L DL D L Q VIF + + L + +
Sbjct: 235 LVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMR 293
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
E NF +H M Q+ER + K F+ G R+L++TD+ RG+D+ +V+++INYD+P++
Sbjct: 294 EANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVSQVSLIINYDLPNNR 353
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
+ Y+HR+GR+GR+G KG+AI FV + D IL ++ + I E+P +
Sbjct: 354 ELYIHRIGRSGRYGRKGVAINFVKN-DDIRILRDIEQYYSTQIDEMPMNV 402
>UNIPROTKB|E1C8R1 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 UniGene:Gga.2331 CTD:1656 EMBL:AADN02058042
EMBL:AADN02058043 IPI:IPI00818395 RefSeq:NP_001006319.2
PRIDE:E1C8R1 Ensembl:ENSGALT00000040594 GeneID:419783
KEGG:gga:419783 NextBio:20822787 ArrayExpress:E1C8R1 Uniprot:E1C8R1
Length = 483
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 126/355 (35%), Positives = 204/355 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D++ +AK+G GK+ +++ L++ + + A+V+ TRELA Q+
Sbjct: 122 IQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVS 181
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKN 119
+ S ++ KV GG N++ D+++ ++ +V+ TPGRIL L + +++
Sbjct: 182 QICIQVSKHMGGAKVMATTGGTNLR--DDIMRLDDTVHVVIATPGRILDLIKKGVAKVEH 239
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
V+ +LDE +K+L S D + +++I P ++Q++++SAT ++ +Q P EI
Sbjct: 240 VQMIVLDEANKLL-SQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEI 298
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
+ +E LTL G+ Q+Y ++E +K LN L L NQ +IF S R L K + +
Sbjct: 299 NLMEE--LTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQ 356
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+ IH+ M QE R + F+ G R LV TDL RGIDI+ VN+VIN+D P A+
Sbjct: 357 LGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAE 416
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
TYLHR+GR+GRFG GLAI ++ D L ++ + +IK +P ID S Y+
Sbjct: 417 TYLHRIGRSGRFGHLGLAINLITY-DDRFNLKSIEEQLGTEIKPIPSNIDKSLYV 470
>POMBASE|SPAC1F5.10 [details] [associations]
symbol:SPAC1F5.10 "ATP-dependent RNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC1F5.10 GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 OMA:EDWKFDT
OrthoDB:EOG4HTD1W PIR:T38085 RefSeq:NP_592863.1
ProteinModelPortal:Q10055 SMR:Q10055 PRIDE:Q10055
EnsemblFungi:SPAC1F5.10.1 GeneID:2541602 KEGG:spo:SPAC1F5.10
NextBio:20802696 Uniprot:Q10055
Length = 394
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 131/350 (37%), Positives = 203/350 (58%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I Q G DVI QA+SG GKTA F + LQ + + AL+L TRELA QI
Sbjct: 47 VQSRAIIQICKGRDVIAQAQSGTGKTATFSIGILQSIDLSVRDTQALILSPTRELAVQIQ 106
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVV-GTPGRILALARDKDLSLKN 119
+ ++ +++ GG ++ D+ K + Q VV GTPGR+ + R ++L +N
Sbjct: 107 NVVLALGDHM-NVQCHACIGGTSVG--NDIKKLDYGQHVVSGTPGRVTDMIRRRNLRTRN 163
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
V+ ILDE D++L + + +I++ P QV++ SATL +++ + KF +P+ I
Sbjct: 164 VKMLILDEADELLNQ-GFKEQIYDIYRYLPPGTQVVVVSATLPQDVLEMTNKFTTNPVRI 222
Query: 180 YVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
V + +LTL GL Q++I + + E K L DL D L Q VIF S + L + +
Sbjct: 223 LVKRD-ELTLEGLKQYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNSRRKVDWLTEKMR 281
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
E NF +H M Q+ER + F++GN R+L+ TD+ RGID+++V++VINYD+P +
Sbjct: 282 EANFTVTSMHGEMPQKERDAIMQDFRQGNSRVLICTDIWARGIDVQQVSLVINYDLPANR 341
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
+ Y+HR+GR+GRFG KG+AI FV++ D IL ++ + I E+P I
Sbjct: 342 ENYIHRIGRSGRFGRKGVAINFVTN-EDVRILRDIEQYYSTVIDEMPMNI 390
>WB|WBGene00022029 [details] [associations]
symbol:Y65B4A.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0018996 GO:GO:0040011 GO:GO:0003676 GO:GO:0042127
GO:GO:0040035 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT EMBL:FO081482
RefSeq:NP_490761.2 ProteinModelPortal:Q9BL61 SMR:Q9BL61
STRING:Q9BL61 PaxDb:Q9BL61 EnsemblMetazoa:Y65B4A.6 GeneID:190485
KEGG:cel:CELE_Y65B4A.6 UCSC:Y65B4A.6 CTD:190485 WormBase:Y65B4A.6
InParanoid:Q9BL61 NextBio:945920 Uniprot:Q9BL61
Length = 399
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 129/350 (36%), Positives = 197/350 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q IP + DVI QA+SG GKTA F +S LQ + + AL+L TRELA QI
Sbjct: 52 IQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQ 111
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVV-GTPGRILALARDKDLSLKN 119
Y+ +++ GG N+ +D+ K + Q VV GTPGR+ + R ++L +
Sbjct: 112 KVVLALGDYM-NVQCHACIGGTNLG--EDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRA 168
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
++ +LDE D+ML + + +I++ P QV++ SATL EI + KFM DP+ I
Sbjct: 169 IKLLVLDEADEMLNK-GFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTSKFMTDPIRI 227
Query: 180 YVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
V + +LTL G+ Q ++ + E K L DL D L Q V+F + + L +
Sbjct: 228 LVKRD-ELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTITQAVLFCNTRRKVDWLTDKMK 286
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
E NF +H M Q++R K F+ G R+L++TD+ RG+D+ +V++VINYD+P++
Sbjct: 287 EANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNR 346
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
+ Y+HR+GR+GRFG KG+AI FV D IL ++ + I E+P I
Sbjct: 347 ELYIHRIGRSGRFGRKGVAINFVKQ-DDVRILRDIEQYYSTQIDEMPMNI 395
>UNIPROTKB|P54824 [details] [associations]
symbol:ddx6 "ATP-dependent RNA helicase ddx6" species:8355
"Xenopus laevis" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003723
GO:GO:0030529 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG106685 CTD:1656 EMBL:X92421 EMBL:BC170228 EMBL:BC170230
RefSeq:NP_001083721.1 UniGene:Xl.157 IntAct:P54824 PRIDE:P54824
GeneID:399080 KEGG:xla:399080 Xenbase:XB-GENE-922237 Uniprot:P54824
Length = 481
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 125/355 (35%), Positives = 203/355 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D++ +AK+G GK+ +++ L++ + + A+V+ TRELA Q+
Sbjct: 121 IQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDCIQAMVIVPTRELALQVS 180
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKN 119
+ S ++ KV GG N++ D+++ ++ +V+ TPGRIL L + + +
Sbjct: 181 QICIQVSKHMGGAKVMATTGGTNLR--DDIMRLDDTVHVVIATPGRILDLIKKGVAKVDH 238
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
++ +LDE DK+L S D + +++I P ++Q++++SAT ++ +Q P EI
Sbjct: 239 IQMIVLDEADKLL-SQDFMQIMEDIIMTLPKNRQILLYSATFPLSVQKFMTLHLQKPYEI 297
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
+ +E LTL G+ Q+Y ++E +K LN L L NQ +IF S R L K + +
Sbjct: 298 NLMEE--LTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQ 355
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+ IH+ M QE R + F+ G R LV TDL RGIDI+ VN+VIN+D P A+
Sbjct: 356 LGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAE 415
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
TYLHR+GR+GRFG GLAI ++ D L ++ + +IK +P ID + Y+
Sbjct: 416 TYLHRIGRSGRFGHLGLAINLITY-DDRFNLKSIEEQLGTEIKPIPSSIDKNLYV 469
>TAIR|locus:2030285 [details] [associations]
symbol:AT1G72730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009505
"plant-type cell wall" evidence=IDA] [GO:0005774 "vacuolar
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0009744 "response
to sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005774
GO:GO:0009505 GO:GO:0003743 EMBL:AC010926 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
ProtClustDB:CLSN2679594 EMBL:AJ010472 EMBL:AY060592 EMBL:AY142066
EMBL:AY088176 IPI:IPI00526542 PIR:B96752 PIR:T51347
RefSeq:NP_177417.1 UniGene:At.22983 ProteinModelPortal:Q9CAI7
SMR:Q9CAI7 IntAct:Q9CAI7 STRING:Q9CAI7 PaxDb:Q9CAI7 PRIDE:Q9CAI7
EnsemblPlants:AT1G72730.1 GeneID:843605 KEGG:ath:AT1G72730
GeneFarm:940 TAIR:At1g72730 InParanoid:Q9CAI7 OMA:AVINYHI
PhylomeDB:Q9CAI7 Genevestigator:Q9CAI7 GermOnline:AT1G72730
Uniprot:Q9CAI7
Length = 414
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 129/338 (38%), Positives = 195/338 (57%)
Query: 12 GMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLP 71
G+DVI QA+SG GKTA F LQQ + + Q ALVL TRELA QI YL
Sbjct: 78 GLDVIQQAQSGTGKTATFCSGVLQQLDISLVQCQALVLAPTRELAQQIEKVMRALGDYL- 136
Query: 72 DIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKM 131
+K GG +++ + +L++ +VVGTPGR+ L R + L ++ F+LDE D+M
Sbjct: 137 GVKAQACVGGTSVREDQRVLQSGV-HVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEM 195
Query: 132 LESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 191
L S + + +IF++ P QV +FSAT+ E + +KFM P+ I V + +LTL G
Sbjct: 196 L-SRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEG 253
Query: 192 LVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 250
+ Q Y+ + + E K L DL + L Q VIFV + + L + + H
Sbjct: 254 IKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGD 313
Query: 251 MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 310
M Q R + F+ G+ R+L+ TDL+ RGID+++V++VIN+D+P + YLHR+GR+GR
Sbjct: 314 MDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGR 373
Query: 311 FGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
FG KG+AI F++S D ++ +Q + V ++ELP +
Sbjct: 374 FGRKGVAINFMTS-EDERMMADIQRFYNVVVEELPSNV 410
>WB|WBGene00018007 [details] [associations]
symbol:F33D11.10 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0018996 GO:GO:0003676
GO:GO:0000910 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 GO:GO:0001703 KO:K13025 OMA:IFGKQPF
EMBL:FO080753 PIR:T32773 RefSeq:NP_491703.1
ProteinModelPortal:O44781 SMR:O44781 DIP:DIP-27243N IntAct:O44781
MINT:MINT-1047941 STRING:O44781 PaxDb:O44781
EnsemblMetazoa:F33D11.10.1 EnsemblMetazoa:F33D11.10.2 GeneID:172258
KEGG:cel:CELE_F33D11.10 UCSC:F33D11.10.1 CTD:172258
WormBase:F33D11.10 InParanoid:O44781 NextBio:874709 Uniprot:O44781
Length = 399
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 128/350 (36%), Positives = 197/350 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q +P + DVI QA+SG GKTA F +S LQ + + AL+L TRELA QI
Sbjct: 52 IQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQ 111
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVV-GTPGRILALARDKDLSLKN 119
Y+ +++ GG N+ +D+ K + Q VV GTPGR+ + R ++L +
Sbjct: 112 KVVLALGDYM-NVQCHACIGGTNLG--EDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRA 168
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
++ +LDE D+ML + + +I++ P QV++ SATL EI + KFM DP+ I
Sbjct: 169 IKLLVLDEADEMLNK-GFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTSKFMTDPIRI 227
Query: 180 YVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
V + +LTL G+ Q ++ + E K L DL D L Q V+F + + L +
Sbjct: 228 LVKRD-ELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTITQAVLFCNTRRKVDWLTDKMK 286
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
E NF +H M Q++R K F+ G R+L++TD+ RG+D+ +V++VINYD+P++
Sbjct: 287 EANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNR 346
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
+ Y+HR+GR+GRFG KG+AI FV D IL ++ + I E+P I
Sbjct: 347 ELYIHRIGRSGRFGRKGVAINFVKQ-DDVRILRDIEQYYSTQIDEMPMNI 395
>CGD|CAL0001638 [details] [associations]
symbol:FAL1 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0097078 "FAl1-SGD1 complex"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0001638 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AACQ01000041 EMBL:AACQ01000040 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ250879
RefSeq:XP_718509.1 RefSeq:XP_718592.1 ProteinModelPortal:Q5A9Z6
SMR:Q5A9Z6 GeneID:3639739 GeneID:3639839 KEGG:cal:CaO19.10024
KEGG:cal:CaO19.2488 KO:K13025 Uniprot:Q5A9Z6
Length = 399
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 126/351 (35%), Positives = 201/351 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I Q I G D I QA+SG GKTA F + L+ + + AL+L TRELA QI
Sbjct: 52 IQSRAIMQIISGRDTIAQAQSGTGKTATFSIGMLEVIDTKSKECQALILSPTRELAIQIQ 111
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKN 119
+ + Y+ +I GG N+ +D+ K + QIV GTPGR++ + + ++L +N
Sbjct: 112 NVVKHLGDYM-NIHTHACIGGKNVG--EDVKKLQQGQQIVSGTPGRVIDVIKRRNLQTRN 168
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
++ ILDE D++ + + EI+K P QV++ SATL +E+ + KF DP++I
Sbjct: 169 IKVLILDEADELFTK-GFKEQIYEIYKHLPPSVQVVVVSATLPREVLEMTSKFTTDPVKI 227
Query: 180 YVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
V + +++L G+ Q+Y++ + K L DL D L Q VIF + + L +
Sbjct: 228 LVKRD-EISLSGIKQYYVQCEREDWKFDTLCDLYDNLTITQAVIFCNTKLKVNWLADQMK 286
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
+ NF + +H M Q+ER + F+ GN R+L++TD+ RGID+++V++VINYD+P
Sbjct: 287 KQNFTVVAMHGDMKQDERDSIMNDFRRGNSRVLISTDVWARGIDVQQVSLVINYDLPTDK 346
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQID 349
+ Y+HR+GR+GRFG KG AI ++ D L + + + IKE+P I+
Sbjct: 347 ENYIHRIGRSGRFGRKGTAINLITK-DDVVTLKEFEKYYSTKIKEMPMNIN 396
>WB|WBGene00000479 [details] [associations]
symbol:cgh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0051729 "germline cell cycle switching, mitotic
to meiotic cell cycle" evidence=IMP] [GO:0008219 "cell death"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0010467 "gene expression" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007276 "gamete generation" evidence=IMP] [GO:0043066 "negative
regulation of apoptotic process" evidence=IMP] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043186 "P granule" evidence=IDA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IDA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0017148 "negative regulation of translation"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0009792 GO:GO:0002009 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 GO:GO:0043066
GO:GO:0030154 GO:GO:0007052 GO:GO:0002119 GO:GO:0017148
GO:GO:0048477 GO:GO:0007283 GO:GO:0051729 GO:GO:0003723
GO:GO:0040035 GO:GO:0000932 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007276 GO:GO:0008026 EMBL:FO080423
RefSeq:NP_498646.1 ProteinModelPortal:Q95YF3 SMR:Q95YF3
DIP:DIP-25457N IntAct:Q95YF3 MINT:MINT-250782 STRING:Q95YF3
PaxDb:Q95YF3 EnsemblMetazoa:C07H6.5.1 EnsemblMetazoa:C07H6.5.2
GeneID:176061 KEGG:cel:CELE_C07H6.5 UCSC:C07H6.5.1 CTD:176061
WormBase:C07H6.5 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 InParanoid:Q95YF3 KO:K12614 OMA:YSHARMK
NextBio:890944 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
Uniprot:Q95YF3
Length = 430
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 125/355 (35%), Positives = 199/355 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I A+ G D++ +AK+G GKT + + +++ +P + A+V+ TRELA Q
Sbjct: 69 IQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTS 128
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKN 119
S ++ +KV V GG +++ D+++ N +V+ TPGRIL L +++
Sbjct: 129 QICVELSKHI-QLKVMVTTGGTDLR--DDIMRLNGTVHLVIATPGRILDLMEKGVAKMEH 185
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
+ +LDE DK+L S D + + + P ++QVM++SAT + +K M P EI
Sbjct: 186 CKTLVLDEADKLL-SQDFQGILDRLINFLPKERQVMLYSATFPNTVTSFMQKHMHKPYEI 244
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
+ +E LTL G+ Q+Y + E +K LN L L NQ +IF S R L K + E
Sbjct: 245 NLMEE--LTLLGVTQYYAFVQEKQKVHCLNTLFRKLQINQSIIFCNSTQRVELLAKKITE 302
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+ IHS M+Q R + F++GN R LV +DL+ RGIDI+ VN+VIN+D P +A+
Sbjct: 303 IGYSCYYIHSKMAQNHRNRVFHDFRQGNCRNLVCSDLLTRGIDIQAVNVVINFDFPRNAE 362
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
TYLHR+GR+GRFG G+AI ++ D L +++ I+ +P+ +D Y+
Sbjct: 363 TYLHRIGRSGRFGHLGVAINLITY-EDRHTLRRIEQELRTRIEPIPKTVDPKLYV 416
>UNIPROTKB|Q95YF3 [details] [associations]
symbol:cgh-1 "ATP-dependent RNA helicase cgh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0009792 GO:GO:0002009 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 GO:GO:0043066
GO:GO:0030154 GO:GO:0007052 GO:GO:0002119 GO:GO:0017148
GO:GO:0048477 GO:GO:0007283 GO:GO:0051729 GO:GO:0003723
GO:GO:0040035 GO:GO:0000932 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007276 GO:GO:0008026 EMBL:FO080423
RefSeq:NP_498646.1 ProteinModelPortal:Q95YF3 SMR:Q95YF3
DIP:DIP-25457N IntAct:Q95YF3 MINT:MINT-250782 STRING:Q95YF3
PaxDb:Q95YF3 EnsemblMetazoa:C07H6.5.1 EnsemblMetazoa:C07H6.5.2
GeneID:176061 KEGG:cel:CELE_C07H6.5 UCSC:C07H6.5.1 CTD:176061
WormBase:C07H6.5 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 InParanoid:Q95YF3 KO:K12614 OMA:YSHARMK
NextBio:890944 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
Uniprot:Q95YF3
Length = 430
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 125/355 (35%), Positives = 199/355 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I A+ G D++ +AK+G GKT + + +++ +P + A+V+ TRELA Q
Sbjct: 69 IQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTS 128
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKN 119
S ++ +KV V GG +++ D+++ N +V+ TPGRIL L +++
Sbjct: 129 QICVELSKHI-QLKVMVTTGGTDLR--DDIMRLNGTVHLVIATPGRILDLMEKGVAKMEH 185
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
+ +LDE DK+L S D + + + P ++QVM++SAT + +K M P EI
Sbjct: 186 CKTLVLDEADKLL-SQDFQGILDRLINFLPKERQVMLYSATFPNTVTSFMQKHMHKPYEI 244
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
+ +E LTL G+ Q+Y + E +K LN L L NQ +IF S R L K + E
Sbjct: 245 NLMEE--LTLLGVTQYYAFVQEKQKVHCLNTLFRKLQINQSIIFCNSTQRVELLAKKITE 302
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+ IHS M+Q R + F++GN R LV +DL+ RGIDI+ VN+VIN+D P +A+
Sbjct: 303 IGYSCYYIHSKMAQNHRNRVFHDFRQGNCRNLVCSDLLTRGIDIQAVNVVINFDFPRNAE 362
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
TYLHR+GR+GRFG G+AI ++ D L +++ I+ +P+ +D Y+
Sbjct: 363 TYLHRIGRSGRFGHLGVAINLITY-EDRHTLRRIEQELRTRIEPIPKTVDPKLYV 416
>FB|FBgn0037573 [details] [associations]
symbol:eIF4AIII "eIF4AIII" species:7227 "Drosophila
melanogaster" [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=ISS] [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0006413 "translational
initiation" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0045451 "pole plasm
oskar mRNA localization" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0006974 "response to
DNA damage stimulus" evidence=IMP] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0016281
GO:GO:0006974 GO:GO:0003743 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045451 GO:GO:0045495 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 ChiTaRS:EIF4A3
EMBL:AY089635 ProteinModelPortal:Q8SXH3 SMR:Q8SXH3 IntAct:Q8SXH3
STRING:Q8SXH3 PaxDb:Q8SXH3 PRIDE:Q8SXH3 FlyBase:FBgn0037573
InParanoid:Q8SXH3 OrthoDB:EOG4XWDD6 Bgee:Q8SXH3 Uniprot:Q8SXH3
Length = 399
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 129/350 (36%), Positives = 196/350 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I + G DVI QA+SG GKTA F +S LQ + + L L TRELA QI
Sbjct: 52 IQQRSITPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLCLSPTRELAVQIQ 111
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQ-IVVGTPGRILALARDKDLSLKN 119
+ +++ V GG N+ +D+ K + Q IV GTPGR+ + + + L +
Sbjct: 112 KVILALGDMM-NVQCHVCIGGTNLG--EDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRA 168
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
++ +LDE D+ML + + ++++ P QV++ SATL EI + KFM DP+ I
Sbjct: 169 IKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRI 227
Query: 180 YVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
V + +LTL G+ Q ++ + E K L DL D L Q VIF + + L + +
Sbjct: 228 LVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMR 286
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
E NF +H M Q+ER K F+ G R+L+ TD+ RGID+++V++VINYD+P++
Sbjct: 287 EANFTVSSMHGDMPQKERDEIMKEFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPNNR 346
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
+ Y+HR+GR+GRFG KG+AI FV S D IL ++ + I E+P +
Sbjct: 347 ELYIHRIGRSGRFGRKGVAINFVKS-DDIRILRDIEQYYSTQIDEMPVNV 395
>ZFIN|ZDB-GENE-070912-83 [details] [associations]
symbol:ddx6 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
6" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-070912-83 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 InterPro:IPR014014 PROSITE:PS51195
EMBL:CR759774 IPI:IPI00505165 ProteinModelPortal:E7FD91
Ensembl:ENSDART00000087382 Bgee:E7FD91 Uniprot:E7FD91
Length = 485
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 127/356 (35%), Positives = 200/356 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQV-TALVLCHTRELAYQI 59
+Q E IP A+ G D++ +AK+G GK+ +++ L++ + + A+V+ TRELA Q+
Sbjct: 123 IQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDSIQAAVVIVPTRELALQV 182
Query: 60 CHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLK 118
+ S ++ +KV GG N++ D+++ +E +V+ TPGRIL L + +
Sbjct: 183 SQICIQVSKHMGGVKVMATTGGTNLR--DDIMRLDETVHVVIATPGRILDLIKKGVAKVG 240
Query: 119 NVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPME 178
V+ +LDE DK+L S D + ++EI +Q++++SAT ++ +Q P E
Sbjct: 241 QVQMIVLDEADKLL-SQDFVQMMEEILSSLSKQRQILLYSATFPLSVQKFMNSHLQKPYE 299
Query: 179 IYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
I + +E LTL G+ Q+Y ++E +K LN L L NQ +IF S R L K +
Sbjct: 300 INLMEE--LTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKIS 357
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
+ + IH+ M QE R + F+ G R LV TDL RGIDI+ VN+VIN+D P
Sbjct: 358 QLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLG 417
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
+TYLHR+GR+GRFG GLAI ++ D L ++ + +IK +P ID S Y+
Sbjct: 418 ETYLHRIGRSGRFGHLGLAINLITY-DDRFNLKGIEEQLGTEIKPIPSSIDKSLYV 472
>UNIPROTKB|B4DIJ6 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 EMBL:AL662847
EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:BX001040 EMBL:BX248516
EMBL:BX927320 EMBL:CR753820 EMBL:CR753864 UniGene:Hs.254042
UniGene:Hs.730849 HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CR942185
EMBL:AK295634 IPI:IPI00910878 SMR:B4DIJ6 STRING:B4DIJ6
Ensembl:ENST00000453105 Ensembl:ENST00000546533
Ensembl:ENST00000547092 Ensembl:ENST00000547978
Ensembl:ENST00000548205 Ensembl:ENST00000548413
Ensembl:ENST00000548818 UCSC:uc011dno.1 HOVERGEN:HBG102589
Uniprot:B4DIJ6
Length = 243
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 108/169 (63%), Positives = 133/169 (78%)
Query: 7 PQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERF 66
P L C ++S G + LS Q+ V+ LV+CHTRELA+QI E+ERF
Sbjct: 37 PSTALAFVTSCSSQSCSGPLSTVALSIRQK-------VSVLVMCHTRELAFQISKEYERF 89
Query: 67 STYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILD 126
S Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK+++HFILD
Sbjct: 90 SKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILD 149
Query: 127 ECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQD 175
ECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KFMQD
Sbjct: 150 ECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQD 198
>UNIPROTKB|P0A9P6 [details] [associations]
symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
process" evidence=IGI] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0070417 "cellular response to cold"
evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
Length = 629
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 120/344 (34%), Positives = 190/344 (55%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q ECIP + G DV+ A++G GKTA F L LQ +P LVL TRELA Q+
Sbjct: 32 IQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVA 91
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
FS ++ + V YGG + L+ + PQIVVGTPGR+L + L L +
Sbjct: 92 EAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGPQIVVGTPGRLLDHLKRGTLDLSKL 150
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+LDE D+ML + DV+ I P Q +FSAT+ + IR + ++FM++P E+
Sbjct: 151 SGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVR 209
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
+ T + Q Y + + KN L L+A DF+ +IFV++ + E+ + L
Sbjct: 210 IQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERN 268
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
+ S ++ M+Q R + K+G IL+ATD+ RG+D+ER+++V+NYD+P +++
Sbjct: 269 GYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSES 328
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKEL 344
Y+HR+GR GR G G A+ FV + + +L ++ ++ I E+
Sbjct: 329 YVHRIGRTGRAGRAGRALLFVENR-ERRLLRNIERTMKLTIPEV 371
>UNIPROTKB|Q81QF0 [details] [associations]
symbol:BAS2301 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 127/348 (36%), Positives = 194/348 (55%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + IP + G D+I QAK+G GKT FVL L++ +P V AL++ TRELA QI
Sbjct: 31 IQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEKIDPESSDVQALIVAPTRELALQIT 90
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E ++ DI V YGG ++ LK IVV TPGR+L R + + L N+
Sbjct: 91 TEIKKMLVQREDINVLAIYGGQDVAQQLRKLKGNT-HIVVATPGRLLDHIRRETIDLSNL 149
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+LDE D+ML D+++I TP KQ M+FSAT+ K+I+ + K++M +P I
Sbjct: 150 STIVLDEADQMLY-FGFLYDIEDILDETPGSKQTMLFSATIPKDIKKLAKRYMDEPQMIQ 208
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
V E ++T+ + Q I+ ++ K L ++D VIF ++ RA++L L
Sbjct: 209 VQSE-EVTVDTIEQRVIETTDRAKPDALRFVMDRDQPFLAVIFCRTKVRASKLYDNLKGL 267
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
+ +H + Q +R K F+E + L+ATD+ RG+D++ V V NYD+P+ ++
Sbjct: 268 GYNCAELHGDIPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVES 327
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDI-KELPEQ 347
Y+HR+GR GR G GLAITFV+ A D L +++ I +E+ EQ
Sbjct: 328 YIHRIGRTGRAGGSGLAITFVA-AKDEKHLEEIEKTLGAPIQREIIEQ 374
>TIGR_CMR|BA_2475 [details] [associations]
symbol:BA_2475 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 127/348 (36%), Positives = 194/348 (55%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + IP + G D+I QAK+G GKT FVL L++ +P V AL++ TRELA QI
Sbjct: 31 IQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEKIDPESSDVQALIVAPTRELALQIT 90
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E ++ DI V YGG ++ LK IVV TPGR+L R + + L N+
Sbjct: 91 TEIKKMLVQREDINVLAIYGGQDVAQQLRKLKGNT-HIVVATPGRLLDHIRRETIDLSNL 149
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+LDE D+ML D+++I TP KQ M+FSAT+ K+I+ + K++M +P I
Sbjct: 150 STIVLDEADQMLY-FGFLYDIEDILDETPGSKQTMLFSATIPKDIKKLAKRYMDEPQMIQ 208
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
V E ++T+ + Q I+ ++ K L ++D VIF ++ RA++L L
Sbjct: 209 VQSE-EVTVDTIEQRVIETTDRAKPDALRFVMDRDQPFLAVIFCRTKVRASKLYDNLKGL 267
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
+ +H + Q +R K F+E + L+ATD+ RG+D++ V V NYD+P+ ++
Sbjct: 268 GYNCAELHGDIPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVES 327
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDI-KELPEQ 347
Y+HR+GR GR G GLAITFV+ A D L +++ I +E+ EQ
Sbjct: 328 YIHRIGRTGRAGGSGLAITFVA-AKDEKHLEEIEKTLGAPIQREIIEQ 374
>POMBASE|SPAC1006.07 [details] [associations]
symbol:SPAC1006.07 "translation initiation factor eIF4A
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002183
"cytoplasmic translational initiation" evidence=NAS] [GO:0003743
"translation initiation factor activity" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
"ATP binding" evidence=IC] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006413 "translational initiation" evidence=ISO] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1006.07 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016281 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0002183 KO:K03257 OrthoDB:EOG4PG98F
EMBL:X80796 EMBL:L40627 PIR:S71745 RefSeq:NP_594854.1
ProteinModelPortal:P47943 SMR:P47943 STRING:P47943 PRIDE:P47943
EnsemblFungi:SPAC1006.07.1 GeneID:2542948 KEGG:spo:SPAC1006.07
OMA:PILEMED NextBio:20803983 Uniprot:P47943
Length = 392
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 127/341 (37%), Positives = 201/341 (58%)
Query: 10 ILG-MDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFST 68
ILG DV+ QA+SG GKTA F +S LQ+ + + Q AL+L TRELA QI
Sbjct: 53 ILGERDVLAQAQSGTGKTATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGD 112
Query: 69 YLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDEC 128
L +++ GG ++ L+ +VVGTPGR+ + + + L V+ F+LDE
Sbjct: 113 -LMNVECHACIGGTLVRDDMAALQAGV-HVVVGTPGRVHDMIQRRALPTDAVQMFVLDEA 170
Query: 129 DKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLT 188
D+ML S + + +IF++ P QV++ SAT+ +++ V KFM+DP+ I V + +LT
Sbjct: 171 DEML-SRGFKDQIYDIFQLLPPTAQVVLLSATMPQDVLEVTTKFMRDPIRILVKKD-ELT 228
Query: 189 LHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICI 247
L G+ Q Y+ + + E K L DL + + Q VIF + + L + L E +F +
Sbjct: 229 LEGIKQFYVAVEKEEWKLDTLCDLYETVTVTQAVIFCNTRRKVDWLTEQLTERDFTVSSM 288
Query: 248 HSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGR 307
H M Q +R T F+ G+ RIL+ TDL+ RGID+++V++VINYD+P + + Y+HR+GR
Sbjct: 289 HGDMDQAQRDTLMHEFRTGSSRILITTDLLARGIDVQQVSLVINYDLPANRENYIHRIGR 348
Query: 308 AGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
GRFG KG++I FV++ D ++ +++ + I+E+P I
Sbjct: 349 GGRFGRKGVSINFVTN-DDVRMMREIEQFYNTHIEEMPMNI 388
>UNIPROTKB|H0Y6G9 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HGNC:HGNC:13917
ChiTaRS:DDX39B EMBL:CT009531 ProteinModelPortal:H0Y6G9 PRIDE:H0Y6G9
Ensembl:ENST00000455806 Bgee:H0Y6G9 Uniprot:H0Y6G9
Length = 138
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 102/137 (74%), Positives = 123/137 (89%)
Query: 32 STLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL 91
+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++L
Sbjct: 2 ATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVL 61
Query: 92 KNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHD 151
K CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+
Sbjct: 62 KKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHE 121
Query: 152 KQVMMFSATLSKEIRPV 168
KQVMMFSATLSKEIRPV
Sbjct: 122 KQVMMFSATLSKEIRPV 138
>TAIR|locus:2091191 [details] [associations]
symbol:EIF4A-III "eukaryotic initiation factor 4A-III"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0001666 "response to
hypoxia" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006397 "mRNA
processing" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0035145 "exon-exon junction complex" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020
GO:GO:0016607 GO:GO:0001666 GO:GO:0006397 GO:GO:0003723
EMBL:AP000417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 GO:GO:0035145 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K13025
OMA:EDWKFDT EMBL:AJ010456 EMBL:AY050367 EMBL:BT002207
IPI:IPI00522986 PIR:T51737 RefSeq:NP_188610.1 UniGene:At.22577
ProteinModelPortal:Q94A52 SMR:Q94A52 STRING:Q94A52 PaxDb:Q94A52
PRIDE:Q94A52 EnsemblPlants:AT3G19760.1 GeneID:821513
KEGG:ath:AT3G19760 GeneFarm:908 TAIR:At3g19760 InParanoid:Q94A52
PhylomeDB:Q94A52 ProtClustDB:CLSN2915442 Genevestigator:Q94A52
GermOnline:AT3G19760 Uniprot:Q94A52
Length = 408
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 126/350 (36%), Positives = 200/350 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + + G DVI QA+SG GKT++ LS Q + + +V AL+L TRELA Q
Sbjct: 61 IQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQVVDTSSREVQALILSPTRELATQTE 120
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKN 119
+ + +I+ GG N + +D+ K E +V GTPGR+ + + + L +
Sbjct: 121 KTIQAIGLHA-NIQAHACIGG-N-SVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRA 177
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
++ ILDE D+ML S + + ++++ P D QV + SATL EI + KFM +P++I
Sbjct: 178 IKLLILDESDEML-SRGFKDQIYDVYRYLPPDLQVCLVSATLPHEILEMTSKFMTEPVKI 236
Query: 180 YVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
V + +LTL G+ Q ++ + + E K L DL D L Q VIF + + L++ +
Sbjct: 237 LVKRD-ELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDYLSEKMR 295
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
NF +H M Q+ER F+ G+ R+L+ TD+ RGID+++V++VINYD+P++
Sbjct: 296 SHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNR 355
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
+ Y+HR+GR+GRFG KG+AI FV S D IL ++ + I E+P +
Sbjct: 356 ELYIHRIGRSGRFGRKGVAINFVKS-DDIKILRDIEQYYSTQIDEMPMNV 404
>TAIR|locus:2020078 [details] [associations]
symbol:EIF4A-2 "eif4a-2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0009651 "response to
salt stress" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005774 GO:GO:0046686 EMBL:AC005287
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 EMBL:X65053
EMBL:AF386923 EMBL:AF428462 EMBL:BT008504 EMBL:AK226344
EMBL:AY087965 IPI:IPI00522023 PIR:JC1453 RefSeq:NP_175829.1
UniGene:At.195 ProteinModelPortal:P41377 SMR:P41377 STRING:P41377
PaxDb:P41377 PRIDE:P41377 ProMEX:P41377 EnsemblPlants:AT1G54270.1
GeneID:841868 KEGG:ath:AT1G54270 GeneFarm:936 TAIR:At1g54270
InParanoid:P41377 OMA:QVVWEEN PhylomeDB:P41377
ProtClustDB:CLSN2679594 Genevestigator:P41377 GermOnline:AT1G54270
Uniprot:P41377
Length = 412
Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
Identities = 128/338 (37%), Positives = 192/338 (56%)
Query: 12 GMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLP 71
G+DVI QA+SG GKTA F LQQ + Q ALVL TRELA QI Y
Sbjct: 76 GLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRELAQQIEKVMRALGDY-Q 134
Query: 72 DIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKM 131
+KV GG +++ + +L+ +VVGTPGR+ + R + L ++ F+LDE D+M
Sbjct: 135 GVKVHACVGGTSVREDQRILQAGV-HVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEM 193
Query: 132 LESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 191
L S + + +IF++ P QV +FSAT+ E + +KFM P+ I V + +LTL G
Sbjct: 194 L-SRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRD-ELTLEG 251
Query: 192 LVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 250
+ Q Y+ + + + K L DL + L Q VIFV + + L + + H
Sbjct: 252 IKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGD 311
Query: 251 MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 310
M Q R + F+ G+ R+L+ TDL+ RGID+++V++VIN+D+P + YLHR+GR+GR
Sbjct: 312 MDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGR 371
Query: 311 FGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
FG KG+AI FV+ D +L +Q + V ++ELP +
Sbjct: 372 FGRKGVAINFVT-LDDQRMLFDIQKFYNVVVEELPSNV 408
>GENEDB_PFALCIPARUM|PFD1070w [details] [associations]
symbol:PFD1070w "eukaryotic initiation factor,
putative" species:5833 "Plasmodium falciparum" [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISS]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006446 GO:GO:0016281
GO:GO:0003743 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025
OMA:EDWKFDT RefSeq:XP_001351530.1 ProteinModelPortal:Q8IFN9
SMR:Q8IFN9 EnsemblProtists:PFD1070w:mRNA GeneID:812458
KEGG:pfa:PFD1070w EuPathDB:PlasmoDB:PF3D7_0422700
ProtClustDB:CLSZ2436055 Uniprot:Q8IFN9
Length = 390
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 119/350 (34%), Positives = 198/350 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I + G DVI Q++SG GKT VF + L N + ++L TRELA Q
Sbjct: 43 IQQRGIKPILNGRDVILQSQSGTGKTCVFAVGALNCVNRNLNETQVIILSPTRELAEQTQ 102
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
+ Y+ + + GG + L N ++ GTPGRI + + L K +
Sbjct: 103 KVCLALADYI-HVTIYCCIGGKKMSDDIKALNNGV-HVISGTPGRIYHMLNLRHLKCKYI 160
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ ++DE D+ML + V +I++ + Q+++ SATL +E+ + KFM P++I
Sbjct: 161 KQLVIDEADEMLNK-GFKEQVYDIYRFLSPNTQIILSSATLPQEVLEITNKFMHKPVKIL 219
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V + +LTL G+ Q ++ + + + K L DL ++L Q V+F + + L K ++E
Sbjct: 220 VKRD-ELTLEGIKQFFVSIEKEQWKYETLADLYESLTITQAVVFCNTQMKVDWLTKKMLE 278
Query: 240 CNFPSIC-IHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
NF ++C +H+GMSQ ER F++ R+L++TD+ GRG+D++ V++V+NYD+P+S
Sbjct: 279 SNF-TVCKMHAGMSQSERDDIMLKFRQCKFRVLISTDIWGRGLDVQEVSLVVNYDLPNSR 337
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
++Y+HR+GR+GRFG KG+AI FV + D IL ++ + I E+P I
Sbjct: 338 ESYIHRIGRSGRFGRKGVAINFVKN-DDIKILRDIEQYYSTQIDEMPMNI 386
>UNIPROTKB|Q8IFN9 [details] [associations]
symbol:PFD1070w "Eukaryotic initiation factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006446
"regulation of translational initiation" evidence=ISS] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006446 GO:GO:0016281
GO:GO:0003743 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025
OMA:EDWKFDT RefSeq:XP_001351530.1 ProteinModelPortal:Q8IFN9
SMR:Q8IFN9 EnsemblProtists:PFD1070w:mRNA GeneID:812458
KEGG:pfa:PFD1070w EuPathDB:PlasmoDB:PF3D7_0422700
ProtClustDB:CLSZ2436055 Uniprot:Q8IFN9
Length = 390
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 119/350 (34%), Positives = 198/350 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I + G DVI Q++SG GKT VF + L N + ++L TRELA Q
Sbjct: 43 IQQRGIKPILNGRDVILQSQSGTGKTCVFAVGALNCVNRNLNETQVIILSPTRELAEQTQ 102
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
+ Y+ + + GG + L N ++ GTPGRI + + L K +
Sbjct: 103 KVCLALADYI-HVTIYCCIGGKKMSDDIKALNNGV-HVISGTPGRIYHMLNLRHLKCKYI 160
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ ++DE D+ML + V +I++ + Q+++ SATL +E+ + KFM P++I
Sbjct: 161 KQLVIDEADEMLNK-GFKEQVYDIYRFLSPNTQIILSSATLPQEVLEITNKFMHKPVKIL 219
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V + +LTL G+ Q ++ + + + K L DL ++L Q V+F + + L K ++E
Sbjct: 220 VKRD-ELTLEGIKQFFVSIEKEQWKYETLADLYESLTITQAVVFCNTQMKVDWLTKKMLE 278
Query: 240 CNFPSIC-IHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
NF ++C +H+GMSQ ER F++ R+L++TD+ GRG+D++ V++V+NYD+P+S
Sbjct: 279 SNF-TVCKMHAGMSQSERDDIMLKFRQCKFRVLISTDIWGRGLDVQEVSLVVNYDLPNSR 337
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
++Y+HR+GR+GRFG KG+AI FV + D IL ++ + I E+P I
Sbjct: 338 ESYIHRIGRSGRFGRKGVAINFVKN-DDIKILRDIEQYYSTQIDEMPMNI 386
>TIGR_CMR|CPS_1726 [details] [associations]
symbol:CPS_1726 "RNA helicase DeaD" species:167879
"Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
OMA:WIVKGVE ProtClustDB:CLSK741103
BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
Length = 611
Score = 512 (185.3 bits), Expect = 3.7e-52, Sum P(2) = 3.7e-52
Identities = 110/316 (34%), Positives = 181/316 (57%)
Query: 6 IPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFER 65
IP + G DV+ +A++G GKTA F L L + + + + +VL TRELA Q+ E
Sbjct: 46 IPPLLAGKDVLGEAQTGTGKTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIES 105
Query: 66 FSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFIL 125
F + ++VA YGG + L+ Q+VVGTPGR++ R K L L +R +L
Sbjct: 106 FGKDMKGLRVATLYGGQSYGPQFQQLERGA-QVVVGTPGRLMDHLRRKSLKLDELRVCVL 164
Query: 126 DECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEA 185
DE D+ML ++ D+Q I P Q+ +FSAT+ IR + +F++DP I V
Sbjct: 165 DEADEML-NMGFLEDIQWILDHIPKTAQMCLFSATMPPAIRKIANRFLKDPEHIKVAAVK 223
Query: 186 KLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSI 245
K + + Q+ K+S + K L + + ++++ ++IFV++ + ++ + L +P++
Sbjct: 224 KAKAN-ITQYAWKVSGITKMTALERIAEVVEYDAMIIFVRTRNDTVDIAEKLERAGYPAL 282
Query: 246 CIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRV 305
++ ++Q +R K G ILVATD+V RG+DI R+++VINYD+P + Y+HR+
Sbjct: 283 ALNGDLNQAQRERCIDQMKSGKSSILVATDVVARGLDIPRISLVINYDLPGDNEAYVHRI 342
Query: 306 GRAGRFGTKGLAITFV 321
GR GR G +G++I FV
Sbjct: 343 GRTGRAGREGMSIAFV 358
Score = 46 (21.3 bits), Expect = 3.7e-52, Sum P(2) = 3.7e-52
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 289 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKEL 344
V+NYD+P+ D R+ R K +A +SS + I+ + A EV + +L
Sbjct: 377 VLNYDLPNIQDIGKIRIERTRVEVAKIVADKDISSMRE--IVEGMAAESEVSMIDL 430
>TAIR|locus:2088237 [details] [associations]
symbol:EIF4A1 "eukaryotic translation initiation factor
4A1" species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005618 GO:GO:0046686 EMBL:CP002686 GO:GO:0005730
GO:GO:0016020 GO:GO:0048046 GO:GO:0006413 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OMA:SKRERIM
IPI:IPI00657454 RefSeq:NP_001030693.1 UniGene:At.23558
UniGene:At.28184 ProteinModelPortal:F4JEL4 SMR:F4JEL4 PRIDE:F4JEL4
EnsemblPlants:AT3G13920.2 GeneID:820605 KEGG:ath:AT3G13920
Uniprot:F4JEL4
Length = 415
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 123/312 (39%), Positives = 182/312 (58%)
Query: 12 GMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLP 71
G+DVI QA+SG GKTA F LQQ + + Q ALVL TRELA QI YL
Sbjct: 76 GLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYL- 134
Query: 72 DIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKM 131
+KV GG +++ + +L+ +VVGTPGR+ + + + L N++ F+LDE D+M
Sbjct: 135 GVKVHACVGGTSVREDQRILQAGV-HVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEM 193
Query: 132 LESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 191
L S + + +IF++ P QV +FSAT+ E + +KFM P+ I V + +LTL G
Sbjct: 194 L-SRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRD-ELTLEG 251
Query: 192 LVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 250
+ Q Y+ + + E K L DL + L Q VIFV + + L + + H
Sbjct: 252 IKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGD 311
Query: 251 MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 310
M Q R + F+ G+ R+L+ TDL+ RGID+++V++VIN+D+P + YLHR+GR+GR
Sbjct: 312 MDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGR 371
Query: 311 FGTKGLAITFVS 322
FG KG+AI FV+
Sbjct: 372 FGRKGVAINFVT 383
>UNIPROTKB|H0Y4V8 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HGNC:HGNC:13917
ChiTaRS:DDX39B EMBL:CT009531 ProteinModelPortal:H0Y4V8 PRIDE:H0Y4V8
Ensembl:ENST00000427927 Bgee:H0Y4V8 Uniprot:H0Y4V8
Length = 136
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 100/135 (74%), Positives = 121/135 (89%)
Query: 32 STLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL 91
+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++L
Sbjct: 2 ATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVL 61
Query: 92 KNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHD 151
K CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+
Sbjct: 62 KKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHE 121
Query: 152 KQVMMFSATLSKEIR 166
KQVMMFSATLSKEIR
Sbjct: 122 KQVMMFSATLSKEIR 136
>UNIPROTKB|F1RZ83 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0045727 "positive regulation of
translation" evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 OMA:EDWKFDT
EMBL:CU655945 Ensembl:ENSSSCT00000018679 ArrayExpress:F1RZ83
Uniprot:F1RZ83
Length = 411
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 118/332 (35%), Positives = 190/332 (57%)
Query: 19 AKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVF 78
++SG GKTA F +S LQ + + AL+L TRELA QI Y+ +++
Sbjct: 82 SQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHAC 140
Query: 79 YGGVNIKIHKDLLKNECPQ-IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDM 137
GG N+ +D+ K + Q +V GTPGR+ + R + L + ++ +LDE D+ML
Sbjct: 141 IGGTNVG--EDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNK-GF 197
Query: 138 RRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYI 197
+ + ++++ P QV++ SATL EI + KFM DP+ I V + +LTL G+ Q ++
Sbjct: 198 KEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRD-ELTLEGIKQFFV 256
Query: 198 KLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEER 256
+ E K L DL D L Q VIF + + L + + E NF +H M Q+ER
Sbjct: 257 AVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKER 316
Query: 257 LTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGL 316
+ K F+ G R+L++TD+ RG+D+ +V+++INYD+P++ + Y+HR+GR+GR+G KG+
Sbjct: 317 ESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGV 376
Query: 317 AITFVSSASDSDILNQVQARFEVDIKELPEQI 348
AI FV + D IL ++ + I E+P +
Sbjct: 377 AINFVKN-DDIRILRDIEQYYSTQIDEMPMNV 407
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 119/331 (35%), Positives = 188/331 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D+I QA++G GKTA F L L + + + V +V+ TRELA Q+
Sbjct: 28 IQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVG 87
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E + + +++ YGG +I LK P I+VGTPGRIL K L L+NV
Sbjct: 88 EELYKIGKH-KRVRILPIYGGQDINRQIRALKKH-PHIIVGTPGRILDHINRKTLRLQNV 145
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+LDE D+ML ++ D++ I P Q ++FSAT+ IR + ++FM +P I
Sbjct: 146 ETVVLDEADEML-NMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIK 204
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
V + ++T+ + Q Y+++ E +K L LLD ++F ++ R EL++ L
Sbjct: 205 VKAK-EVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLR 263
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
+ + IH ++Q +R++ + FKEG+ +LVATD+ RG+DI V V N+D+P ++
Sbjct: 264 GYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPES 323
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILN 331
Y+HR+GR GR G KG+A+ FV+ + N
Sbjct: 324 YVHRIGRTGRAGKKGIAMLFVTPRESGQLKN 354
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 119/331 (35%), Positives = 188/331 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D+I QA++G GKTA F L L + + + V +V+ TRELA Q+
Sbjct: 28 IQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVG 87
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E + + +++ YGG +I LK P I+VGTPGRIL K L L+NV
Sbjct: 88 EELYKIGKH-KRVRILPIYGGQDINRQIRALKKH-PHIIVGTPGRILDHINRKTLRLQNV 145
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+LDE D+ML ++ D++ I P Q ++FSAT+ IR + ++FM +P I
Sbjct: 146 ETVVLDEADEML-NMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIK 204
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
V + ++T+ + Q Y+++ E +K L LLD ++F ++ R EL++ L
Sbjct: 205 VKAK-EVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLR 263
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
+ + IH ++Q +R++ + FKEG+ +LVATD+ RG+DI V V N+D+P ++
Sbjct: 264 GYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPES 323
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILN 331
Y+HR+GR GR G KG+A+ FV+ + N
Sbjct: 324 YVHRIGRTGRAGKKGIAMLFVTPRESGQLKN 354
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 119/331 (35%), Positives = 188/331 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D+I QA++G GKTA F L L + + + V +V+ TRELA Q+
Sbjct: 28 IQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVG 87
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E + + +++ YGG +I LK P I+VGTPGRIL K L L+NV
Sbjct: 88 EELYKIGKH-KRVRILPIYGGQDINRQIRALKKH-PHIIVGTPGRILDHINRKTLRLQNV 145
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+LDE D+ML ++ D++ I P Q ++FSAT+ IR + ++FM +P I
Sbjct: 146 ETVVLDEADEML-NMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIK 204
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
V + ++T+ + Q Y+++ E +K L LLD ++F ++ R EL++ L
Sbjct: 205 VKAK-EVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLR 263
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
+ + IH ++Q +R++ + FKEG+ +LVATD+ RG+DI V V N+D+P ++
Sbjct: 264 GYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPES 323
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILN 331
Y+HR+GR GR G KG+A+ FV+ + N
Sbjct: 324 YVHRIGRTGRAGKKGIAMLFVTPRESGQLKN 354
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 119/331 (35%), Positives = 188/331 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D+I QA++G GKTA F L L + + + V +V+ TRELA Q+
Sbjct: 28 IQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVG 87
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E + + +++ YGG +I LK P I+VGTPGRIL K L L+NV
Sbjct: 88 EELYKIGKH-KRVRILPIYGGQDINRQIRALKKH-PHIIVGTPGRILDHINRKTLRLQNV 145
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+LDE D+ML ++ D++ I P Q ++FSAT+ IR + ++FM +P I
Sbjct: 146 ETVVLDEADEML-NMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIK 204
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
V + ++T+ + Q Y+++ E +K L LLD ++F ++ R EL++ L
Sbjct: 205 VKAK-EVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLR 263
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
+ + IH ++Q +R++ + FKEG+ +LVATD+ RG+DI V V N+D+P ++
Sbjct: 264 GYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPES 323
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILN 331
Y+HR+GR GR G KG+A+ FV+ + N
Sbjct: 324 YVHRIGRTGRAGKKGIAMLFVTPRESGQLKN 354
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 119/331 (35%), Positives = 188/331 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D+I QA++G GKTA F L L + + + V +V+ TRELA Q+
Sbjct: 28 IQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVG 87
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E + + +++ YGG +I LK P I+VGTPGRIL K L L+NV
Sbjct: 88 EELYKIGKH-KRVRILPIYGGQDINRQIRALKKH-PHIIVGTPGRILDHINRKTLRLQNV 145
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+LDE D+ML ++ D++ I P Q ++FSAT+ IR + ++FM +P I
Sbjct: 146 ETVVLDEADEML-NMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIK 204
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
V + ++T+ + Q Y+++ E +K L LLD ++F ++ R EL++ L
Sbjct: 205 VKAK-EVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLR 263
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
+ + IH ++Q +R++ + FKEG+ +LVATD+ RG+DI V V N+D+P ++
Sbjct: 264 GYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPES 323
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILN 331
Y+HR+GR GR G KG+A+ FV+ + N
Sbjct: 324 YVHRIGRTGRAGKKGIAMLFVTPRESGQLKN 354
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 119/331 (35%), Positives = 188/331 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D+I QA++G GKTA F L L + + + V +V+ TRELA Q+
Sbjct: 28 IQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVG 87
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E + + +++ YGG +I LK P I+VGTPGRIL K L L+NV
Sbjct: 88 EELYKIGKH-KRVRILPIYGGQDINRQIRALKKH-PHIIVGTPGRILDHINRKTLRLQNV 145
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+LDE D+ML ++ D++ I P Q ++FSAT+ IR + ++FM +P I
Sbjct: 146 ETVVLDEADEML-NMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIK 204
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
V + ++T+ + Q Y+++ E +K L LLD ++F ++ R EL++ L
Sbjct: 205 VKAK-EVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLR 263
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
+ + IH ++Q +R++ + FKEG+ +LVATD+ RG+DI V V N+D+P ++
Sbjct: 264 GYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPES 323
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILN 331
Y+HR+GR GR G KG+A+ FV+ + N
Sbjct: 324 YVHRIGRTGRAGKKGIAMLFVTPRESGQLKN 354
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 119/331 (35%), Positives = 188/331 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D+I QA++G GKTA F L L + + + V +V+ TRELA Q+
Sbjct: 28 IQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVG 87
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E + + +++ YGG +I LK P I+VGTPGRIL K L L+NV
Sbjct: 88 EELYKIGKH-KRVRILPIYGGQDINRQIRALKKH-PHIIVGTPGRILDHINRKTLRLQNV 145
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+LDE D+ML ++ D++ I P Q ++FSAT+ IR + ++FM +P I
Sbjct: 146 ETVVLDEADEML-NMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIK 204
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
V + ++T+ + Q Y+++ E +K L LLD ++F ++ R EL++ L
Sbjct: 205 VKAK-EVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLR 263
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
+ + IH ++Q +R++ + FKEG+ +LVATD+ RG+DI V V N+D+P ++
Sbjct: 264 GYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPES 323
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILN 331
Y+HR+GR GR G KG+A+ FV+ + N
Sbjct: 324 YVHRIGRTGRAGKKGIAMLFVTPRESGQLKN 354
>DICTYBASE|DDB_G0280147 [details] [associations]
symbol:ddx47 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0280147 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000152_GR GO:GO:0003723
EMBL:AAFI02000035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q5STU4 KO:K14777 OMA:IFIPSKF
RefSeq:XP_641271.1 ProteinModelPortal:Q54VT4 SMR:Q54VT4
EnsemblProtists:DDB0234204 GeneID:8622403 KEGG:ddi:DDB_G0280147
Uniprot:Q54VT4
Length = 546
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 120/351 (34%), Positives = 202/351 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D+I A++G GKTA FV+ LQ+ P + L L TRELAYQI
Sbjct: 145 IQRESIPWALKGRDIIGLAQTGSGKTAAFVIPVLQKLLEAPQGLFCLALAPTRELAYQIA 204
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSLKN 119
+F + + +K V GG++ + + L + P +VVG+PGR+L L K +L++
Sbjct: 205 DQFNAIGSTI-GVKTCVLVGGID-SMSQSLALAKKPHVVVGSPGRVLHHLEHTKGFNLRS 262
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
+++FI+DE D++ S D +V I K+ P ++ +FSAT++ ++ + + + +P+++
Sbjct: 263 IKYFIMDEADRLF-SADFEEEVNNILKVIPKERNTYLFSATMTSKVAKLQRASLVNPVKV 321
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V + + T+ L+Q Y+ + K+ L +L+ L N +IF + + + ++ +L
Sbjct: 322 QVASKYQ-TVDTLLQQYLFVPFKYKDCYLAYILNELAGNLTIIFTSTCASSTKIAMMLRN 380
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
F +I I+ M Q +RL FK+G K ILVATD+ RG+DI V++VINYD+P ++
Sbjct: 381 LGFGAIPINGDMDQGKRLASLNKFKQGTKSILVATDVAARGLDIPSVDLVINYDVPTNSK 440
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDT 350
Y+HRVGR R G G AIT V+ D ++ +++ + + P Q +T
Sbjct: 441 EYVHRVGRTARAGNSGRAITIVTQY-DVEMYQRIEFVLKKKLDSFPCQEET 490
>UNIPROTKB|F1NTS2 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 IPI:IPI00588271 EMBL:AADN02041229
EMBL:AADN02041230 ProteinModelPortal:F1NTS2
Ensembl:ENSGALT00000038969 OMA:KTRNGVD ArrayExpress:F1NTS2
Uniprot:F1NTS2
Length = 414
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 124/351 (35%), Positives = 198/351 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I Q I G DVI Q++SG GKTA F +S LQ + + AL+L TRELA QI
Sbjct: 66 IQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQI- 124
Query: 61 HEFERFSTYLPDIKVAVFYGGV-NIKIHKDL-LKNECPQIVVGTPGRILALARDKDLSLK 118
+ S LP +K+ + + + K DL +E + + G ++L + R + L +
Sbjct: 125 -QKVGTSKSLP-VKMKELHKAMGSFKQEVDLPAGHEVARCISGIQLQLLYMIRRRSLRTR 182
Query: 119 NVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPME 178
++ +LDE D+ML + + ++++ P QV++ SATL EI + KFM DP+
Sbjct: 183 AIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIR 241
Query: 179 IYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL 237
I V + +LTL G+ Q ++ + E K L DL D L Q VIF + + L + +
Sbjct: 242 ILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKM 300
Query: 238 VECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 297
E NF +H M Q+ER + K F+ G R+L++TD+ RG+D+ +V+++INYD+P++
Sbjct: 301 REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNN 360
Query: 298 ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
+ Y+HR+GR+GR+G KG+AI FV + D IL ++ + I E+P +
Sbjct: 361 RELYIHRIGRSGRYGRKGVAINFVKN-DDIRILRDIEQYYSTQIDEMPMNV 410
>DICTYBASE|DDB_G0269146 [details] [associations]
symbol:ifdA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0269146
GO:GO:0005524 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0045335 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 KO:K03257 OMA:AVINYHI EMBL:U78759
RefSeq:XP_645917.1 ProteinModelPortal:P90529 STRING:P90529
PRIDE:P90529 EnsemblProtists:DDB0191262 GeneID:8616858
KEGG:ddi:DDB_G0269146 InParanoid:P90529 Uniprot:P90529
Length = 395
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 126/348 (36%), Positives = 191/348 (54%)
Query: 2 QHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICH 61
Q IP + G D+I QA+SG GKTA F + L + + + + AL++ TRELA QI
Sbjct: 52 QRAIIPLS-KGFDIIAQAQSGTGKTATFTVGILSRIDISVLKCQALIIAPTRELAQQIQK 110
Query: 62 EFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVR 121
YL IK GG I L++ +VVGTPGR+ + ++ +R
Sbjct: 111 VVLALGEYL-HIKSYACIGGTKITDDIQALQSGV-HVVVGTPGRVFEMLSRGIINRDTIR 168
Query: 122 HFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYV 181
F LDE D+ML S + + EIF+ P QV +FSAT++ E + KFMQ+P+ I V
Sbjct: 169 IFCLDEADEML-SRGFKDQIYEIFRFLPKTIQVGLFSATMTDETLGITSKFMQNPVSILV 227
Query: 182 DDEAKLTLHGLVQHYIKLS-ELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
+ +LTL G+ Q Y+ + E K L DL + L Q VIF + + L + E
Sbjct: 228 KKD-ELTLEGIRQFYVNVGVEQGKFEVLTDLYETLSITQSVIFCNTRRKVDWLTSKMTEQ 286
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
F H Q++R + F+ G R+L+ TDL+ RGID+++V++VIN+D+P + +
Sbjct: 287 KFTVSSTHG--DQKDRDGILQAFRSGATRVLITTDLLARGIDVQQVSLVINFDLPTNIEN 344
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
Y+HR+GR+GRFG KG+AI F++ A I +++ + I E+P+ I
Sbjct: 345 YIHRIGRSGRFGRKGVAINFITDAERGQI-DELSRHYNTYIAEMPQDI 391
>UNIPROTKB|F1NRN3 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:AADN02044991 IPI:IPI00820769
ProteinModelPortal:F1NRN3 Ensembl:ENSGALT00000002285 Uniprot:F1NRN3
Length = 676
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 125/356 (35%), Positives = 192/356 (53%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + IP G+D+I QAKSG GKT VF L + L+L TRE+A QI
Sbjct: 47 VQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDALLLDSPATQVLILAPTREIAVQIH 106
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
+ ++ VF GG + K LK +C I VG+PGRI L L+ ++
Sbjct: 107 AVITTIGIKMEGLECHVFIGGTPLSQDKVRLK-KC-HIAVGSPGRIKQLIELDYLNTASI 164
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
R FILDE DK+LE + + I+ P +KQ++ SAT + + +M++P +
Sbjct: 165 RLFILDEADKLLEEGSFQEQINWIYSSLPANKQMLAVSATYPESLANALTMYMREPTFVR 224
Query: 181 VDDEAKLTLHGLVQHY--IKLSEL------EKNRKLNDLLDALDFNQVVIFVKSVSRAAE 232
++ +L GL Q+Y + L EK + L +L + FNQ ++F SRA
Sbjct: 225 LNPTDP-SLIGLKQYYKIVNSHPLPHKTFEEKTQHLQELFSKIPFNQALVFSNLHSRAQH 283
Query: 233 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 292
L ++L FP+ CI M+Q +RL K+ + R+L++TDL RGID E+VN+VIN
Sbjct: 284 LAEILTSRGFPAECISGSMNQSQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVINL 343
Query: 293 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
D+P +TY+HR+GRAGRFGT GL++T+ + +++ ++ + + + LPE I
Sbjct: 344 DVPVDWETYMHRIGRAGRFGTLGLSVTYCCRGEEENMMMKIAQKCNLQLLPLPEPI 399
>TAIR|locus:2008296 [details] [associations]
symbol:AT1G51380 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009560
"embryo sac egg cell differentiation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005730 EMBL:AC024261
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 EMBL:AC006085 KO:K13025
EMBL:AY058890 EMBL:AY079046 IPI:IPI00529522 PIR:H96551
RefSeq:NP_175549.1 UniGene:At.11244 ProteinModelPortal:Q9C8J1
SMR:Q9C8J1 PaxDb:Q9C8J1 PRIDE:Q9C8J1 EnsemblPlants:AT1G51380.1
GeneID:841562 KEGG:ath:AT1G51380 GeneFarm:1010 TAIR:At1g51380
InParanoid:Q9C8J1 OMA:DITNITH PhylomeDB:Q9C8J1
ProtClustDB:CLSN2912843 Genevestigator:Q9C8J1 GermOnline:AT1G51380
Uniprot:Q9C8J1
Length = 392
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 125/350 (35%), Positives = 196/350 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + + G DVI QA+SG GKT++ +S Q + +V LVL +RELA Q
Sbjct: 48 IQQRALVPILKGRDVIAQAQSGTGKTSMIAISVCQIVNISSRKVQVLVLSPSRELASQTE 107
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKN 119
+ + +I+ GG +I +D+ K E V GTPGR+ + + L K
Sbjct: 108 KTIQAIGAHT-NIQAHACIGGKSIG--EDIKKLERGVHAVSGTPGRVYDMIKRGSLQTKA 164
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
V+ +LDE D+ML S ++ + ++++ PHD QV + SATL +EI + +KFM DP+ I
Sbjct: 165 VKLLVLDESDEML-SKGLKDQIYDVYRALPHDIQVCLISATLPQEILEMTEKFMTDPVRI 223
Query: 180 YVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
V + +LTL G+ Q+Y+ + + E K L DL L NQ +IF + + L + +
Sbjct: 224 LVKPD-ELTLEGIKQYYVDVDKEEWKFDTLCDLYGRLTINQAIIFCNTRQKVDWLTEKMR 282
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
NF +H Q+ER F+ R+L+A+D+ RGID++ V+ VINYD+P++
Sbjct: 283 SSNFIVSSMHGDKRQKERDDIMNQFRSFKSRVLIASDVWARGIDVQTVSHVINYDIPNNP 342
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
+ Y+HR+GRAGRFG +G+AI FV S SD L ++ + I+E+P +
Sbjct: 343 ELYIHRIGRAGRFGREGVAINFVKS-SDMKDLKDIERHYGTKIREMPADL 391
>UNIPROTKB|E1BSE5 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:AADN02041229
EMBL:AADN02041230 IPI:IPI00819993 Ensembl:ENSGALT00000013903
ArrayExpress:E1BSE5 Uniprot:E1BSE5
Length = 402
Score = 413 (150.4 bits), Expect = 4.7e-50, Sum P(2) = 4.7e-50
Identities = 85/238 (35%), Positives = 140/238 (58%)
Query: 109 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 168
+ R + L + ++ +LDE D+ML + + ++++ P QV++ SATL EI +
Sbjct: 166 MIRRRSLRTRAIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLISATLPHEILEM 224
Query: 169 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSV 227
KFM DP+ I V + +LTL G+ Q ++ + E K L DL D L Q VIF +
Sbjct: 225 TNKFMTDPIRILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTK 283
Query: 228 SRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVN 287
+ L + + E NF +H M Q+ER + K F+ G R+L++TD+ RG+D+ +V+
Sbjct: 284 RKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVS 343
Query: 288 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELP 345
++INYD+P++ + Y+HR+GR+GR+G KG+AI FV + D IL ++ + I E+P
Sbjct: 344 LIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKN-DDIRILRDIEQYYSTQIDEMP 400
Score = 125 (49.1 bits), Expect = 4.7e-50, Sum P(2) = 4.7e-50
Identities = 29/59 (49%), Positives = 36/59 (61%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 59
+Q I Q I G DVI Q++SG GKTA F +S LQ + + AL+L TRELA QI
Sbjct: 65 IQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQI 123
>UNIPROTKB|E7EQG2 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:AC112907 HGNC:HGNC:3284 ChiTaRS:EIF4A2
IPI:IPI00924536 ProteinModelPortal:E7EQG2 SMR:E7EQG2 PRIDE:E7EQG2
Ensembl:ENST00000425053 ArrayExpress:E7EQG2 Bgee:E7EQG2
Uniprot:E7EQG2
Length = 362
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 122/305 (40%), Positives = 174/305 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI
Sbjct: 59 IQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQ 118
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
Y+ A GG N++ L+ E P IVVGTPGR+ + + LS K +
Sbjct: 119 KVILALGDYMGATCHACI-GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWI 177
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ F+LDE D+ML S + + EIF+ QV++ SAT+ ++ V KKFM+DP+ I
Sbjct: 178 KMFVLDEADEML-SRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRIL 236
Query: 181 VDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V E +LTL G+ Q YI + E K L DL + L Q VIF+ + + L + +
Sbjct: 237 VKKE-ELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHA 295
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + +
Sbjct: 296 RDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRE 355
Query: 300 TYLHR 304
Y+HR
Sbjct: 356 NYIHR 360
>UNIPROTKB|Q29S22 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] [GO:0006915 "apoptotic
process" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 EMBL:BC113207
IPI:IPI00688068 RefSeq:NP_001039850.1 UniGene:Bt.23258
ProteinModelPortal:Q29S22 SMR:Q29S22 PRIDE:Q29S22
Ensembl:ENSBTAT00000003058 GeneID:534721 KEGG:bta:534721 CTD:51202
HOVERGEN:HBG100512 InParanoid:Q29S22 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4TXBRS NextBio:20876515 Uniprot:Q29S22
Length = 457
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 117/350 (33%), Positives = 200/350 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D+I A++G GKT F L L P ++ ALVL TRELA+QI
Sbjct: 52 IQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQIS 111
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSLKN 119
+FE + + ++ AV GG++ + + L + P IV+ TPGR++ L K +L+
Sbjct: 112 EQFEALGSSI-GVQCAVIVGGID-SMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRA 169
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
+++ ++DE D++L ++D +V +I K+ P D++ +FSAT++K+++ + + +++P++
Sbjct: 170 LKYLVMDEADRIL-NMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKC 228
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V + + T+ L Q+Y+ + K+ L +L+ L N +IF + + LL
Sbjct: 229 AVSSKYQ-TVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRN 287
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
F +I +H MSQ +RL FK + IL+ATD+ RG+DI V++V+N+D+P +
Sbjct: 288 LGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSK 347
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQID 349
Y+HRVGR R G G AITFV+ D ++ +++ + P Q D
Sbjct: 348 DYIHRVGRTARAGRSGKAITFVTQY-DVELFQRIEHLIGKKLPVFPTQDD 396
>UNIPROTKB|Q9H0S4 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006915 "apoptotic process" evidence=IDA]
[GO:0008380 "RNA splicing" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 GO:GO:0003723
EMBL:CH471094 UniGene:Hs.719938 GermOnline:ENSG00000178878
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF EMBL:AF078843 EMBL:AL136666 EMBL:AK054574 EMBL:AK127712
EMBL:AC007215 EMBL:BC009379 EMBL:BC068009 IPI:IPI00023972
IPI:IPI00397372 RefSeq:NP_057439.2 RefSeq:NP_957518.1 PDB:3BER
PDBsum:3BER ProteinModelPortal:Q9H0S4 SMR:Q9H0S4 IntAct:Q9H0S4
MINT:MINT-3056694 STRING:Q9H0S4 PhosphoSite:Q9H0S4 DMDM:52782792
SWISS-2DPAGE:Q9H0S4 PaxDb:Q9H0S4 PRIDE:Q9H0S4 DNASU:51202
Ensembl:ENST00000352940 Ensembl:ENST00000358007 GeneID:51202
KEGG:hsa:51202 UCSC:uc001rav.3 GeneCards:GC12P012966
HGNC:HGNC:18682 HPA:HPA014855 neXtProt:NX_Q9H0S4
PharmGKB:PA134918403 InParanoid:Q9H0S4 PhylomeDB:Q9H0S4
ChiTaRS:DDX47 EvolutionaryTrace:Q9H0S4 GenomeRNAi:51202
NextBio:54238 ArrayExpress:Q9H0S4 Bgee:Q9H0S4 CleanEx:HS_DDX47
Genevestigator:Q9H0S4 Uniprot:Q9H0S4
Length = 455
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 117/350 (33%), Positives = 200/350 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D+I A++G GKT F L L P ++ ALVL TRELA+QI
Sbjct: 50 IQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQIS 109
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSLKN 119
+FE + + ++ AV GG++ + + L + P I++ TPGR++ L K +L+
Sbjct: 110 EQFEALGSSI-GVQSAVIVGGID-SMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRA 167
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
+++ ++DE D++L ++D +V +I K+ P D++ +FSAT++K+++ + + +++P++
Sbjct: 168 LKYLVMDEADRIL-NMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKC 226
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V + + T+ L Q+YI + K+ L +L+ L N +IF + + LL
Sbjct: 227 AVSSKYQ-TVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRN 285
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
F +I +H MSQ +RL FK + IL+ATD+ RG+DI V++V+N+D+P +
Sbjct: 286 LGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSK 345
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQID 349
Y+HRVGR R G G AITFV+ D ++ +++ + P Q D
Sbjct: 346 DYIHRVGRTARAGRSGKAITFVTQY-DVELFQRIEHLIGKKLPGFPTQDD 394
>POMBASE|SPAC823.08c [details] [associations]
symbol:SPAC823.08c "ATP-dependent RNA helicase Rrp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC823.08c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P RefSeq:NP_593835.1 ProteinModelPortal:Q9P6N8
SMR:Q9P6N8 STRING:Q9P6N8 EnsemblFungi:SPAC823.08c.1 GeneID:2543571
KEGG:spo:SPAC823.08c NextBio:20804578 Uniprot:Q9P6N8
Length = 465
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 115/323 (35%), Positives = 184/323 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP + DVI A++G GKTA F L +Q+ NP A+VL TRELAYQI
Sbjct: 72 IQQEAIPVVLNKRDVIGLAQTGSGKTAAFALPVIQELWNNPSPFFAVVLAPTRELAYQIS 131
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSLKN 119
+FE + ++ V GG+++ L + P ++V TPGR++ L K SLKN
Sbjct: 132 EQFEAIGGSI-GVRSVVIVGGMDMVTQAVALSKK-PHVLVCTPGRLMDHLENTKGFSLKN 189
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
+++ I+DE D++L+ +D + +I K+ PH+++ ++FSAT++ ++ + + + P+ +
Sbjct: 190 LKYLIMDEADRLLD-MDFGPIIDKILKIIPHERRTLLFSATMTSKVEKLQRASLHQPVRV 248
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V + T+ L+Q Y+ K+ L L++ L N ++IF ++V+ L LL
Sbjct: 249 AVSSKFS-TVDTLIQRYLFFPFKHKDTYLVYLVNELAGNSIIIFARTVNDTQRLAILLRT 307
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
F +I +H +SQ RL FK G + LVATD+ RG+DI V++VINYD+P +
Sbjct: 308 LGFSAIPLHGQLSQSNRLGALNKFKSGARSTLVATDVAARGLDIPLVDVVINYDIPTDSK 367
Query: 300 TYLHRVGRAGRFGTKGLAITFVS 322
Y+HRVGR R G G +I V+
Sbjct: 368 AYIHRVGRTARAGRAGKSIALVT 390
>UNIPROTKB|F1PXG6 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:AAEX03011088 EMBL:AAEX03011089
Ensembl:ENSCAFT00000021679 Uniprot:F1PXG6
Length = 825
Score = 524 (189.5 bits), Expect = 7.5e-50, P = 7.5e-50
Identities = 126/357 (35%), Positives = 190/357 (53%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + IP G+D+I QAKSG GKT VF L L+L TRE+A QI
Sbjct: 90 VQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLVLENQSTQILILAPTREIAVQIH 149
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
+ ++ VF GG + K LK +C I VG+PGRI L L+ ++
Sbjct: 150 SVITAIGIKMEGLECHVFIGGTPLSQDKTRLK-KC-HIAVGSPGRIKQLIELDYLNPGSI 207
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
R FILDE DK+LE + + I+ P KQ++ SAT + + K+M+DP +
Sbjct: 208 RLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVR 267
Query: 181 VDDEAKLTLHGLVQHYI---------KLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAA 231
++ +L GL Q+Y K+ E EK + L +L + FNQ ++F SRA
Sbjct: 268 LNSSDP-SLIGLKQYYKIVNSYPLAHKIFE-EKAQHLQELFSRIPFNQALVFSNLHSRAQ 325
Query: 232 ELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVIN 291
L +L FP+ CI M+Q +RL K + R+L++TDL RGID E+VN+V+N
Sbjct: 326 HLADILSAKGFPAECISGNMNQNQRLDAMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVN 385
Query: 292 YDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
D+P +TY+HR+GRAGRFGT GL +T+ + +++ ++ + +++ LP+ I
Sbjct: 386 LDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENVMMKIAQKCNINLLPLPDPI 442
>UNIPROTKB|J9P828 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:VEDYEHY
GeneTree:ENSGT00530000062880 EMBL:AAEX03011088 EMBL:AAEX03011089
Ensembl:ENSCAFT00000050085 Uniprot:J9P828
Length = 825
Score = 524 (189.5 bits), Expect = 7.5e-50, P = 7.5e-50
Identities = 126/357 (35%), Positives = 190/357 (53%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + IP G+D+I QAKSG GKT VF L L+L TRE+A QI
Sbjct: 90 VQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLVLENQSTQILILAPTREIAVQIH 149
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
+ ++ VF GG + K LK +C I VG+PGRI L L+ ++
Sbjct: 150 SVITAIGIKMEGLECHVFIGGTPLSQDKTRLK-KC-HIAVGSPGRIKQLIELDYLNPGSI 207
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
R FILDE DK+LE + + I+ P KQ++ SAT + + K+M+DP +
Sbjct: 208 RLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVR 267
Query: 181 VDDEAKLTLHGLVQHYI---------KLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAA 231
++ +L GL Q+Y K+ E EK + L +L + FNQ ++F SRA
Sbjct: 268 LNSSDP-SLIGLKQYYKIVNSYPLAHKIFE-EKAQHLQELFSRIPFNQALVFSNLHSRAQ 325
Query: 232 ELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVIN 291
L +L FP+ CI M+Q +RL K + R+L++TDL RGID E+VN+V+N
Sbjct: 326 HLADILSAKGFPAECISGNMNQNQRLDAMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVN 385
Query: 292 YDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
D+P +TY+HR+GRAGRFGT GL +T+ + +++ ++ + +++ LP+ I
Sbjct: 386 LDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENVMMKIAQKCNINLLPLPDPI 442
>UNIPROTKB|F1SBP3 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:11218
KO:K13131 OMA:VEDYEHY GeneTree:ENSGT00530000062880 EMBL:CU466482
RefSeq:XP_001928579.1 UniGene:Ssc.6364 Ensembl:ENSSSCT00000007430
GeneID:100152786 KEGG:ssc:100152786 Uniprot:F1SBP3
Length = 832
Score = 524 (189.5 bits), Expect = 8.0e-50, P = 8.0e-50
Identities = 123/356 (34%), Positives = 191/356 (53%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + IP G+D+I QAKSG GKT VF L L+L TRE+A QI
Sbjct: 95 VQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIH 154
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
+ ++ VF GG + K LK +C I VG+PGRI L L+ ++
Sbjct: 155 SVITAIGVKMEGLECHVFIGGTPLSQDKTRLK-KC-HIAVGSPGRIKQLIELDYLNPGSI 212
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
R FILDE DK+LE + + I+ P KQ++ SAT + + K+M++P +
Sbjct: 213 RLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMREPTFVR 272
Query: 181 VDDEAKLTLHGLVQHYIKLSEL--------EKNRKLNDLLDALDFNQVVIFVKSVSRAAE 232
++ +L GL Q+Y ++ EK + L +L + FNQ ++F SRA
Sbjct: 273 LNSSDP-SLIGLKQYYKVVNSYPLAHKIFEEKAQHLQELFSKIPFNQALVFSNLHSRAQH 331
Query: 233 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 292
L +L FP++CI M+Q +RL K+ + R+L++TDL RGID E+VN+V+N
Sbjct: 332 LADILSSKGFPAVCISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNL 391
Query: 293 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
D+P +TY+HR+GRAGRFGT GL +T+ + +++ ++ + +++ LP+ I
Sbjct: 392 DVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMKIAQKCHINLLLLPDPI 447
>UNIPROTKB|E2RN03 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF EMBL:AAEX03015248 Ensembl:ENSCAFT00000020996
NextBio:20853120 Uniprot:E2RN03
Length = 482
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 117/350 (33%), Positives = 200/350 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D+I A++G GKT F L L P ++ ALVL TRELA+QI
Sbjct: 76 IQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQIS 135
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSLKN 119
+FE + + ++ AV GG++ + + L + P IV+ TPGR++ L K +L+
Sbjct: 136 EQFEALGSSI-GVQSAVIVGGID-SMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRA 193
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
+++ ++DE D++L ++D +V +I K+ P D++ +FSAT++K+++ + + +++P++
Sbjct: 194 LKYLVMDEADRIL-NMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKC 252
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V + + T+ L Q+Y+ + K+ L +L+ L N +IF + + LL
Sbjct: 253 AVSSKYQ-TVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRN 311
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
F +I +H MSQ +RL FK + IL+ATD+ RG+DI V++V+N+D+P +
Sbjct: 312 LGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSK 371
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQID 349
Y+HRVGR R G G AITFV+ D ++ +++ + P Q D
Sbjct: 372 DYIHRVGRTARAGRSGKAITFVTQY-DVELFQRIEHLIGKKLPVFPTQDD 420
>UNIPROTKB|Q9UHI6 [details] [associations]
symbol:DDX20 "Probable ATP-dependent RNA helicase DDX20"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0000244 "assembly of spliceosomal tri-snRNP" evidence=TAS]
[GO:0005856 "cytoskeleton" evidence=TAS] [GO:0000387 "spliceosomal
snRNP assembly" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0034660 "ncRNA metabolic process" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_71 Reactome:REACT_21257
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0017053
GO:GO:0005654 GO:GO:0006917 GO:GO:0005856 GO:GO:0003677
GO:GO:0005681 GO:GO:0000244 GO:GO:0000122 GO:GO:0043065
GO:GO:0015030 GO:GO:0034660 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:AF171063 EMBL:AF106019 EMBL:AK001506
EMBL:AL049557 EMBL:BC011556 EMBL:AL133598 IPI:IPI00005904
PIR:T43476 RefSeq:NP_009135.4 UniGene:Hs.591405 PDB:2OXC PDB:3B7G
PDBsum:2OXC PDBsum:3B7G ProteinModelPortal:Q9UHI6 SMR:Q9UHI6
DIP:DIP-32606N IntAct:Q9UHI6 MINT:MINT-96973 STRING:Q9UHI6
PhosphoSite:Q9UHI6 DMDM:12643886 PaxDb:Q9UHI6 PeptideAtlas:Q9UHI6
PRIDE:Q9UHI6 DNASU:11218 Ensembl:ENST00000369702 GeneID:11218
KEGG:hsa:11218 UCSC:uc001ebs.3 CTD:11218 GeneCards:GC01P112298
HGNC:HGNC:2743 HPA:CAB015427 HPA:HPA005516 HPA:HPA023541 MIM:606168
neXtProt:NX_Q9UHI6 PharmGKB:PA27209 HOGENOM:HOG000112184
HOVERGEN:HBG051330 InParanoid:Q9UHI6 KO:K13131 OMA:VEDYEHY
OrthoDB:EOG4SF95N PhylomeDB:Q9UHI6 EvolutionaryTrace:Q9UHI6
GenomeRNAi:11218 NextBio:42699 ArrayExpress:Q9UHI6 Bgee:Q9UHI6
CleanEx:HS_DDX20 Genevestigator:Q9UHI6 GermOnline:ENSG00000064703
Uniprot:Q9UHI6
Length = 824
Score = 523 (189.2 bits), Expect = 9.6e-50, P = 9.6e-50
Identities = 124/356 (34%), Positives = 189/356 (53%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + IP G+D+I QAKSG GKT VF L L+L TRE+A QI
Sbjct: 88 VQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIH 147
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
+ ++ VF GG + K LK +C I VG+PGRI L L+ ++
Sbjct: 148 SVITAIGIKMEGLECHVFIGGTPLSQDKTRLK-KC-HIAVGSPGRIKQLIELDYLNPGSI 205
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
R FILDE DK+LE + + I+ P KQ++ SAT + + K+M+DP +
Sbjct: 206 RLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVR 265
Query: 181 VDDEAKLTLHGLVQHYIKLSEL--------EKNRKLNDLLDALDFNQVVIFVKSVSRAAE 232
++ +L GL Q+Y ++ EK + L +L + FNQ ++F SRA
Sbjct: 266 LNSSDP-SLIGLKQYYKVVNSYPLAHKVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQH 324
Query: 233 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 292
L +L FP+ CI M+Q +RL K + R+L++TDL RGID E+VN+V+N
Sbjct: 325 LADILSSKGFPAECISGNMNQNQRLDAMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVNL 384
Query: 293 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
D+P +TY+HR+GRAGRFGT GL +T+ + +++ ++ + +++ LP+ I
Sbjct: 385 DVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMRIAQKCNINLLPLPDPI 440
>FB|FBgn0011802 [details] [associations]
symbol:Gem3 "Gemin3" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IMP] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0022618 "ribonucleoprotein complex
assembly" evidence=IMP] [GO:0071254 "cytoplasmic U snRNP body"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014296 GO:GO:0007528 GO:GO:0006200 GO:GO:0003676
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0016779 HSSP:P10081 KO:K13131
GeneTree:ENSGT00530000062880 GO:GO:0071254 GO:GO:0022618
EMBL:AF160911 RefSeq:NP_524019.1 UniGene:Dm.921 SMR:Q9V3C4
IntAct:Q9V3C4 MINT:MINT-750334 STRING:Q9V3C4
EnsemblMetazoa:FBtr0076292 EnsemblMetazoa:FBtr0334100 GeneID:39195
KEGG:dme:Dmel_CG6539 UCSC:CG6539-RA CTD:39195 FlyBase:FBgn0011802
InParanoid:Q9V3C4 OMA:TPTKIQA OrthoDB:EOG44MW6X GenomeRNAi:39195
NextBio:812430 Uniprot:Q9V3C4
Length = 1028
Score = 526 (190.2 bits), Expect = 1.3e-49, P = 1.3e-49
Identities = 119/357 (33%), Positives = 191/357 (53%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q IP A+ MD+I Q+KSG GKT ++V++ +Q PN Q A+++ TRELA Q+
Sbjct: 51 IQAAAIPMALAKMDLIIQSKSGTGKTLIYVIAVVQSFNPNINQPHAMIVVPTRELAIQVQ 110
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
F D K + F GG ++ KD + ++++GTPGR+L L ++ + +
Sbjct: 111 DTFFHLCKSFRDFKCSAFIGGTDVA--KDRKRMNESRVIIGTPGRLLHLYENRVFDVSKL 168
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
R +LDE D++ ++ ++ V ++ + P ++Q++ SAT + + K M PM I
Sbjct: 169 RLLVLDEADQLYQTKSLQHTVSKLIEAMPKNRQIIACSATYDQNLDERLAKVMDKPMLIS 228
Query: 181 VDDEAKLTLHGLVQHYIKLSE----LEKNRK----LNDLLDALDFNQVVIFVKSVSRAAE 232
+ A + L G+ Q +L + +E+ R L + + L + Q +IF S RA
Sbjct: 229 NSERATVLL-GIRQFVYELPQQNNSVEEMRLKLQILGQIFNQLPYEQAIIFASSQMRADS 287
Query: 233 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 292
L I M Q ERL ++G++ RILVATDL+ RG+D N+VIN
Sbjct: 288 YKNYLTASGIDCHLISGAMEQSERLHVFEGYRNFTMRILVATDLMARGVDSPHANLVINI 347
Query: 293 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEV--DIKELPEQ 347
D P TYLHR+GRAGRFG+KG+AITF++S +S ++ + + E P++
Sbjct: 348 DPPQDHVTYLHRIGRAGRFGSKGIAITFIASKKESQRFREMSKKIATAWSVLEFPKE 404
>ZFIN|ZDB-GENE-030131-202 [details] [associations]
symbol:ddx20 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 20" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-202
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:BX664742 IPI:IPI00890438
Ensembl:ENSDART00000087037 Ensembl:ENSDART00000134226
Uniprot:F1R1C1
Length = 789
Score = 520 (188.1 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 125/359 (34%), Positives = 192/359 (53%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + IP G+D+I QAKSG GKT VF L LVL TRE+A QI
Sbjct: 80 IQLKAIPLGRCGLDLIVQAKSGTGKTCVFTTIALDSLILENATTQVLVLAPTREIAVQIH 139
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
+ + ++ VF GG I K LK +C I +G+PGRI L L + ++
Sbjct: 140 AVVMAIGSAMEGLECHVFIGGRPISQDKQHLK-KC-HIAIGSPGRIKQLIEMGALMVSSI 197
Query: 121 RHFILDECDKMLE---SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 177
R F+LDE DK+LE S + + I+ P +KQ++ SAT + + ++M++P
Sbjct: 198 RLFVLDEADKLLEDDSSSSFQEQINWIYSSLPANKQMLALSATYPESLAQQLSRYMREPT 257
Query: 178 EIYVDDEAKLTLHGLVQHY--IKLSEL------EKNRKLNDLLDALDFNQVVIFVKSVSR 229
+ ++ L GL Q+Y + L EK + L +L + FNQ ++F +R
Sbjct: 258 FVRLNPTDPGLL-GLKQYYKIVPSHSLPHKVFEEKVQSLLELFSKIPFNQALVFSNLHTR 316
Query: 230 AAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIV 289
A L +L P++CI G+SQ++RL K+ R+L++TDL RGID E+VN+V
Sbjct: 317 AQHLADILSSKGLPAVCISGGLSQDQRLEAMWKLKQYQCRVLISTDLTSRGIDAEKVNLV 376
Query: 290 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
IN D+P +TY+HR+GRAGRFGT G+A+T+ + + + + + +D+ LP+ I
Sbjct: 377 INLDVPQDWETYMHRIGRAGRFGTLGVAVTYCCHGEEENKMMAIAQKCSLDLMHLPDPI 435
>MGI|MGI:1915005 [details] [associations]
symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 47"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915005
GO:GO:0005524 GO:GO:0006915 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF OrthoDB:EOG4TXBRS ChiTaRS:DDX47 EMBL:AK010310
EMBL:AK076982 IPI:IPI00187240 RefSeq:NP_080636.2 UniGene:Mm.166524
ProteinModelPortal:Q9CWX9 SMR:Q9CWX9 IntAct:Q9CWX9
PhosphoSite:Q9CWX9 PaxDb:Q9CWX9 PRIDE:Q9CWX9
Ensembl:ENSMUST00000032326 GeneID:67755 KEGG:mmu:67755
InParanoid:Q9CWX9 NextBio:325481 Bgee:Q9CWX9 CleanEx:MM_DDX47
Genevestigator:Q9CWX9 GermOnline:ENSMUSG00000030204 Uniprot:Q9CWX9
Length = 455
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 116/348 (33%), Positives = 199/348 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D+I A++G GKT F L L P ++ ALVL TRELA+QI
Sbjct: 50 IQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQIS 109
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSLKN 119
+FE + + ++ AV GG++ + + L + P IV+ TPGR++ L K +L+
Sbjct: 110 EQFEALGSSI-GVQCAVIVGGID-SMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRA 167
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
+++ ++DE D++L ++D +V +I K+ P D++ +FSAT++K+++ + + +++P++
Sbjct: 168 LKYLVMDEADRIL-NMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKC 226
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V + + T+ L Q+Y+ + K+ L +L+ L N +IF + + LL
Sbjct: 227 AVSSKYQ-TVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRN 285
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
F +I +H MSQ +RL FK + IL+ATD+ RG+DI V++V+N+D+P +
Sbjct: 286 LGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSK 345
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ 347
Y+HRVGR R G G AITFV+ D ++ +++ + P Q
Sbjct: 346 DYIHRVGRTARAGRSGKAITFVTQY-DVELFQRIEHLIGKKLPVFPTQ 392
>UNIPROTKB|G3V727 [details] [associations]
symbol:Ddx47 "Protein Ddx47" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:CH473964
GeneTree:ENSGT00670000098028 CTD:51202 KO:K14777 OMA:IFIPSKF
RefSeq:NP_001015005.2 UniGene:Rn.73790 Ensembl:ENSRNOT00000011096
GeneID:297685 KEGG:rno:297685 RGD:1310437 NextBio:642541
Uniprot:G3V727
Length = 455
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 116/348 (33%), Positives = 199/348 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D+I A++G GKT F L L P ++ ALVL TRELA+QI
Sbjct: 50 IQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQIS 109
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSLKN 119
+FE + + ++ AV GG++ + + L + P IV+ TPGR++ L K +L+
Sbjct: 110 EQFEALGSSI-GVQCAVIVGGID-SMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRA 167
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
+++ ++DE D++L ++D +V +I K+ P D++ +FSAT++K+++ + + +++P++
Sbjct: 168 LKYLVMDEADRIL-NMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKC 226
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V + + T+ L Q+Y+ + K+ L +L+ L N +IF + + LL
Sbjct: 227 AVSSKYQ-TVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRN 285
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
F +I +H MSQ +RL FK + IL+ATD+ RG+DI V++V+N+D+P +
Sbjct: 286 LGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSK 345
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ 347
Y+HRVGR R G G AITFV+ D ++ +++ + P Q
Sbjct: 346 DYIHRVGRTARAGRSGKAITFVTQY-DVELFQRIEHLIGKKLPVFPTQ 392
>UNIPROTKB|F1MAM8 [details] [associations]
symbol:Ddx20 "Protein Ddx20" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:621744 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:11218
KO:K13131 GeneTree:ENSGT00530000062880 IPI:IPI00947925
RefSeq:NP_001178640.1 UniGene:Rn.137424 Ensembl:ENSRNOT00000068152
GeneID:84473 KEGG:rno:84473 NextBio:616964 ArrayExpress:F1MAM8
Uniprot:F1MAM8
Length = 824
Score = 521 (188.5 bits), Expect = 1.6e-49, P = 1.6e-49
Identities = 123/356 (34%), Positives = 190/356 (53%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + IP G+D+I QAKSG GKT VF L L+L TRE+A QI
Sbjct: 88 VQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIH 147
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
+ ++ VF GG + K LK +C I VG+PGRI L L+ ++
Sbjct: 148 SVITAIGIKMEGLECHVFIGGTPLSQDKTRLK-KC-HIAVGSPGRIKQLIELDYLNPGSI 205
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
R FILDE DK+LE + + I+ P KQ++ SAT + + ++M+DP +
Sbjct: 206 RLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEILANALTRYMRDPTFVR 265
Query: 181 VDDEAKLTLHGLVQHYIKLSEL--------EKNRKLNDLLDALDFNQVVIFVKSVSRAAE 232
++ +L GL Q+Y ++ EK + L +L + FNQ ++F SRA
Sbjct: 266 LNPSDP-SLIGLKQYYQVVNSYPLAHKIFEEKTQHLQELFSKIPFNQALVFSNLHSRAQH 324
Query: 233 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 292
L +L FP+ CI M+Q +RL K+ + R+L++TDL RGID E+VN+V+N
Sbjct: 325 LADILSSKGFPTECISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNL 384
Query: 293 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
D+P +TY+HR+GRAGRFGT GL +T+ + +++ ++ + +++ LP+ I
Sbjct: 385 DVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMKIAQKCNINLLPLPDPI 440
>MGI|MGI:1858415 [details] [associations]
symbol:Ddx20 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 20"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006917 "induction
of apoptosis" evidence=IPI] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IDA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1858415 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0008380
GO:GO:0003677 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:CH466608 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:11218 HOGENOM:HOG000112184 HOVERGEN:HBG051330
KO:K13131 OMA:VEDYEHY OrthoDB:EOG4SF95N EMBL:AJ250027 EMBL:AF220454
EMBL:BC125471 EMBL:BC137721 IPI:IPI00122400 RefSeq:NP_059093.3
UniGene:Mm.272826 ProteinModelPortal:Q9JJY4 SMR:Q9JJY4
IntAct:Q9JJY4 STRING:Q9JJY4 PhosphoSite:Q9JJY4 PaxDb:Q9JJY4
PRIDE:Q9JJY4 Ensembl:ENSMUST00000090680 GeneID:53975 KEGG:mmu:53975
GeneTree:ENSGT00530000062880 InParanoid:Q059Z6 NextBio:310865
Bgee:Q9JJY4 CleanEx:MM_DDX20 Genevestigator:Q9JJY4
GermOnline:ENSMUSG00000027905 Uniprot:Q9JJY4
Length = 825
Score = 521 (188.5 bits), Expect = 1.6e-49, P = 1.6e-49
Identities = 123/356 (34%), Positives = 190/356 (53%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + IP G+D+I QAKSG GKT VF L L+L TRE+A QI
Sbjct: 89 VQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIH 148
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
+ ++ VF GG + K LK +C I VG+PGRI L L+ ++
Sbjct: 149 SVITAIGIKMEGLECHVFIGGTPLSQDKTRLK-KC-HIAVGSPGRIKQLIELDYLNPGSI 206
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
R FILDE DK+LE + + I+ P KQ++ SAT + + ++M+DP +
Sbjct: 207 RLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEVLANALTRYMRDPTFVR 266
Query: 181 VDDEAKLTLHGLVQHYIKLSEL--------EKNRKLNDLLDALDFNQVVIFVKSVSRAAE 232
++ +L GL Q+Y ++ EK + L +L + FNQ ++F SRA
Sbjct: 267 LNPSDP-SLIGLKQYYQVVNSYPLAHKIFEEKTQHLQELFSKVPFNQALVFSNLHSRAQH 325
Query: 233 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 292
L +L FP+ CI M+Q +RL K+ + R+L++TDL RGID E+VN+V+N
Sbjct: 326 LADILSSKGFPTECISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNL 385
Query: 293 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
D+P +TY+HR+GRAGRFGT GL +T+ + +++ ++ + +++ LP+ I
Sbjct: 386 DVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMKIAQKCNINLLPLPDPI 441
>FB|FBgn0032919 [details] [associations]
symbol:CG9253 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
EMBL:AY121677 ProteinModelPortal:Q8MRB7 SMR:Q8MRB7 STRING:Q8MRB7
PaxDb:Q8MRB7 PRIDE:Q8MRB7 FlyBase:FBgn0032919 InParanoid:Q8MRB7
OrthoDB:EOG4V41Q7 ArrayExpress:Q8MRB7 Bgee:Q8MRB7 Uniprot:Q8MRB7
Length = 507
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 114/335 (34%), Positives = 197/335 (58%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G DVI A++G GKT F L L NP + ALVL TRELA+QI
Sbjct: 87 IQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYFALVLTPTRELAFQIG 146
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSLKN 119
+FE + + IK V GG+++ + + L + P I++ TPGR++ L K +LK
Sbjct: 147 EQFEALGSGI-GIKCCVVVGGMDM-VAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKA 204
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
+++ ++DE D++L ++D ++ +I K+ P +++ +FSAT++K+++ + + ++DP+++
Sbjct: 205 IKYLVMDEADRIL-NMDFEVELDKILKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKV 263
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V ++ + T+ L Q Y+ + K+ L +L+ L N +IF + + + +L
Sbjct: 264 EVSNKYQ-TVEQLQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRA 322
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+I +H MSQ +RL FK N+ IL++TD+ RG+DI V++V+N+D+P +
Sbjct: 323 LGLAAIPLHGQMSQNKRLAALNKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSK 382
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQ 334
Y+HRVGR R G G AIT VS D ++ +++
Sbjct: 383 DYIHRVGRTARAGRSGKAITLVSQY-DIELYQRIE 416
>UNIPROTKB|Q4K8U0 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A" species:220664
"Pseudomonas protegens Pf-5" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006950 "response to stress"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006950
GO:GO:0006355 GO:GO:0003723 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
OMA:LPQGMPK RefSeq:YP_261343.1 ProteinModelPortal:Q4K8U0
GeneID:3477377 KEGG:pfl:PFL_4251 PATRIC:19877913
ProtClustDB:CLSK867560 BioCyc:PFLU220664:GIX8-4286-MONOMER
Uniprot:Q4K8U0
Length = 557
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 110/323 (34%), Positives = 185/323 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + IP + G D+I QA++G GKTA F L L + +P+ + AL+L TRELA Q+
Sbjct: 32 IQQQSIPIILAGHDMIGQAQTGTGKTAAFALPILHRIDPSKREPQALILAPTRELALQVA 91
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSLKN 119
FE ++ +P + V YGG + ++N QIVV TPGR+ L RD+ + L
Sbjct: 92 TAFETYAKQMPGVTVVAVYGGAPMGPQLKAIRNGA-QIVVATPGRLCDHLRRDEKV-LAT 149
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
V H +LDE D+ML+ L D++ IFK P +Q ++FSATL + IR + ++ ++DP +
Sbjct: 150 VNHLVLDEADEMLK-LGFMDDLEVIFKAMPETRQTVLFSATLPQSIRAIAERHLKDPKHV 208
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
+ + + T+ + Q ++ + +K + LL+ DF+ +++FV++ +L L
Sbjct: 209 KIQSKTQ-TVTAIEQAHLLVHADQKTSAVLSLLEVEDFDALIMFVRTKQATLDLASALEA 267
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+ + ++ ++Q +R K+G I+VATD+ RG+D+ R+ V N DMP +
Sbjct: 268 KGYKAAALNGDIAQNQRERVIDSLKDGRLDIVVATDVAARGLDVPRITHVFNVDMPYDPE 327
Query: 300 TYLHRVGRAGRFGTKGLAITFVS 322
+Y+HR+GR GR G +G A+ V+
Sbjct: 328 SYVHRIGRTGRAGREGRALLLVT 350
>UNIPROTKB|H0Y6N8 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HGNC:HGNC:13917
ChiTaRS:DDX39B EMBL:CT009531 ProteinModelPortal:H0Y6N8 PRIDE:H0Y6N8
Ensembl:ENST00000427652 Bgee:H0Y6N8 Uniprot:H0Y6N8
Length = 131
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 95/130 (73%), Positives = 116/130 (89%)
Query: 32 STLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL 91
+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++L
Sbjct: 2 ATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVL 61
Query: 92 KNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHD 151
K CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+
Sbjct: 62 KKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHE 121
Query: 152 KQVMMFSATL 161
KQVMMFSATL
Sbjct: 122 KQVMMFSATL 131
>UNIPROTKB|F1P5C0 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006917
"induction of apoptosis" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:VEDYEHY
GeneTree:ENSGT00530000062880 EMBL:AADN02044991 IPI:IPI00582962
Ensembl:ENSGALT00000040229 Uniprot:F1P5C0
Length = 753
Score = 515 (186.3 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 125/358 (34%), Positives = 192/358 (53%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + IP G+D+I QAKSG GKT VF L + L+L TRE+A QI
Sbjct: 31 VQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDALLLDSPATQVLILAPTREIAVQIH 90
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTP--GRILALARDKDLSLK 118
+ ++ VF GG + K LK +C I VG+P GRI L L+
Sbjct: 91 AVITTIGIKMEGLECHVFIGGTPLSQDKVRLK-KC-HIAVGSPDVGRIKQLIELDYLNTA 148
Query: 119 NVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPME 178
++R FILDE DK+LE + + I+ P +KQ++ SAT + + +M++P
Sbjct: 149 SIRLFILDEADKLLEEGSFQEQINWIYSSLPANKQMLAVSATYPESLANALTMYMREPTF 208
Query: 179 IYVDDEAKLTLHGLVQHY--IKLSEL------EKNRKLNDLLDALDFNQVVIFVKSVSRA 230
+ ++ +L GL Q+Y + L EK + L +L + FNQ ++F SRA
Sbjct: 209 VRLNPTDP-SLIGLKQYYKIVNSHPLPHKTFEEKTQHLQELFSKIPFNQALVFSNLHSRA 267
Query: 231 AELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVI 290
L ++L FP+ CI M+Q +RL K+ + R+L++TDL RGID E+VN+VI
Sbjct: 268 QHLAEILTSRGFPAECISGSMNQSQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVI 327
Query: 291 NYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
N D+P +TY+HR+GRAGRFGT GL++T+ + +++ ++ + + + LPE I
Sbjct: 328 NLDVPVDWETYMHRIGRAGRFGTLGLSVTYCCRGEEENMMMKIAQKCNLQLLPLPEPI 385
>UNIPROTKB|K7EPJ3 [details] [associations]
symbol:DDX39A "ATP-dependent RNA helicase DDX39A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:17821 EMBL:AC008569
Ensembl:ENST00000590315 Uniprot:K7EPJ3
Length = 189
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 100/144 (69%), Positives = 116/144 (80%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+QHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTRELA+QI
Sbjct: 58 VQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQIS 117
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E+ERFS Y+P +K +++LK CP +VVGTPGRILAL R++ SLKNV
Sbjct: 118 KEYERFSKYMPSVK------------DEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNV 165
Query: 121 RHFILDECDKMLESLDMRRDVQEI 144
+HF+LDECDKMLE LDMRRDVQEI
Sbjct: 166 KHFVLDECDKMLEQLDMRRDVQEI 189
>WB|WBGene00012059 [details] [associations]
symbol:T26G10.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0010171 GO:GO:0003723 GO:GO:0040035
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 KO:K14777
OMA:IFIPSKF EMBL:Z29115 PIR:S40731 RefSeq:NP_499069.1
ProteinModelPortal:P34580 SMR:P34580 STRING:P34580 PaxDb:P34580
EnsemblMetazoa:T26G10.1 GeneID:176321 KEGG:cel:CELE_T26G10.1
UCSC:T26G10.1 CTD:176321 WormBase:T26G10.1 InParanoid:P34580
NextBio:892086 Uniprot:P34580
Length = 489
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 119/344 (34%), Positives = 189/344 (54%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q +P A+ G DVI A++G GKT F + LQ +P LVL TRELA+QI
Sbjct: 70 IQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIG 129
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSLKN 119
+FE + + I AV GGV++ L P I+V TPGR++ L K +LK
Sbjct: 130 QQFEALGSGIGLI-AAVIVGGVDMAAQAMALARR-PHIIVATPGRLVDHLENTKGFNLKA 187
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
++ I+DE D++L ++D ++ +I K+ P +++ +FSAT++K++ + + ++DP +
Sbjct: 188 LKFLIMDEADRIL-NMDFEVELDKILKVIPRERRTYLFSATMTKKVSKLERASLRDPARV 246
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V K T+ L QHYI + K L LL+ N ++F + + ++ +L +
Sbjct: 247 SVSSRYK-TVDNLKQHYIFVPNKYKETYLVYLLNEHAGNSAIVFCATCATTMQIAVMLRQ 305
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
++ +H MSQE+RL FK + ILV TD+ RG+DI V++VINYDMP +
Sbjct: 306 LGMQAVPLHGQMSQEKRLGSLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSK 365
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKE 343
Y+HRVGR R G G+AIT V+ D + +++A + E
Sbjct: 366 DYVHRVGRTARAGRSGIAITVVTQY-DVEAYQKIEANLGKKLDE 408
>UNIPROTKB|Q5ZLB0 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 CTD:51202
HOVERGEN:HBG100512 KO:K14777 OMA:IFIPSKF OrthoDB:EOG4TXBRS
EMBL:AADN02006011 EMBL:AADN02006010 EMBL:AJ719824 IPI:IPI00584081
RefSeq:NP_001007854.1 UniGene:Gga.13941 SMR:Q5ZLB0 STRING:Q5ZLB0
Ensembl:ENSGALT00000019245 GeneID:417959 KEGG:gga:417959
InParanoid:Q5ZLB0 NextBio:20821184 Uniprot:Q5ZLB0
Length = 453
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 117/348 (33%), Positives = 198/348 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D+I A++G GKT F L LQ P ++ ALVL TRELA+QI
Sbjct: 51 IQVEAIPVALQGRDIIGLAETGSGKTGAFALPILQALLDAPQRLFALVLTPTRELAFQIS 110
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSLKN 119
+FE + + + AV GG++ + + L + P I++ TPGR++ L K +L+
Sbjct: 111 EQFEALGSSI-GVHSAVIVGGID-SMSQSLALAKKPHIIIATPGRLVDHLENTKGFNLRA 168
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
++ ++DE D++L ++D +V +I K+ P D++ +FSAT++K+++ + + +++P++
Sbjct: 169 LKFLVMDEADRIL-NMDFETEVDKILKVIPRDRKTFLFSATMTKQVQKLQRAALKNPVKC 227
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V + + T+ L Q+YI + K+ L +L+ L N +IF + + LL
Sbjct: 228 AVSSKYQ-TVEKLQQYYIFIPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRTALLLRN 286
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
F +I +H MSQ +RL FK + IL+ATD+ RG+DI V++VIN+D+P +
Sbjct: 287 LGFTAIPLHGQMSQNKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVINFDIPTHSK 346
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ 347
Y+HRVGR R G G +ITFV+ D ++ +++ + P Q
Sbjct: 347 DYIHRVGRTARAGRSGKSITFVTQY-DVELFQRIEHLIGKKLPAFPMQ 393
>ZFIN|ZDB-GENE-050522-359 [details] [associations]
symbol:zgc:112350 "zgc:112350" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-359 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG100512 KO:K14777
EMBL:BC095776 IPI:IPI00488135 RefSeq:NP_001018522.1
UniGene:Dr.84733 ProteinModelPortal:Q502B4 SMR:Q502B4 GeneID:553715
KEGG:dre:553715 NextBio:20880445 Uniprot:Q502B4
Length = 512
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 114/348 (32%), Positives = 199/348 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G DVI A++G GKT F + LQ ++ LVL TRELA+QI
Sbjct: 105 IQIEAIPVALQGRDVIGLAETGSGKTGAFAVPVLQSLLACAQRLHTLVLTPTRELAFQIA 164
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSLKN 119
+F+ + + +K AV GG+++ + + L+ + P +V+ TPGR++ + K +L+
Sbjct: 165 EQFDALGSSI-GVKTAVIVGGIDM-MSQALVLAKKPHVVIATPGRLIDHMENTKGFNLRA 222
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
+++ ++DE D++L ++D +V +I K+ P D++ +FSAT++K+++ + + +QDP++
Sbjct: 223 LKYLVMDEADRIL-NMDFESEVDKILKVIPRDRRTFLFSATMTKKVQKLQRAALQDPVKC 281
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V + T+ L Q YI + K+ L +L+ L N ++F + + + LL
Sbjct: 282 SVSSKYA-TVDKLQQFYIFIPSKYKDCYLVSILNELAGNSFMVFCGTCNNTQRVALLLRN 340
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+I +H MSQ +RL FK ++ +L+ATD+ RG+DI V+ VIN+D+P +
Sbjct: 341 LGITAIPLHGQMSQNKRLGALNKFKSKSRSVLLATDVASRGLDIPHVDCVINFDIPTHSK 400
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ 347
Y+HRVGR R G G +ITFV+ D ++ +++A + P Q
Sbjct: 401 DYIHRVGRTARAGRSGKSITFVTQY-DVELFQRIEALIGKKLPAFPTQ 447
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 128/362 (35%), Positives = 200/362 (55%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQT----EPNPGQVTALVLCHTRELA 56
+Q + IP + G DV+ A++G GKTA F L L+ + GQ ALVL TRELA
Sbjct: 27 IQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLELLAKGHKAKSGQTRALVLTPTRELA 86
Query: 57 YQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLS 116
Q+ E + YLP ++ AV +GGV I + L++ ++V TPGR+L L + +
Sbjct: 87 AQVGESVETYGKYLP-LRSAVVFGGVPINPQINKLRHGV-DVLVATPGRLLDLVQQNAVK 144
Query: 117 LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDP 176
+ +LDE D+ML+ + RD+++I + P +Q +MFSAT S EIR + K + P
Sbjct: 145 FNQLEILVLDEADRMLD-MGFIRDIKKILALLPAKRQNLMFSATFSDEIRELAKGLVNHP 203
Query: 177 MEIYVDDE-AKLTLHGLVQHYI-KLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELN 234
+EI V A T V+ +I + + +K+ L L+ ++ QV++F ++ A L
Sbjct: 204 VEISVTPRNAAATT---VKQWICPVDKTQKSALLIQLIKQENWQQVLVFSRTKHGANRLA 260
Query: 235 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 294
K L++ + IH SQ R FK G R+LVATD+ RG+DI+++ V+N+D+
Sbjct: 261 KSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVATDIAARGLDIDQLPQVVNFDL 320
Query: 295 PDSADTYLHRVGRAGRFGTKGLAITFVSSAS-----DSD-ILNQVQARFEVD----IKEL 344
P+ + Y+HR+GR GR G G A++ VSS D + ++N+V R EV+ + L
Sbjct: 321 PNVPEDYVHRIGRTGRAGATGQAVSLVSSEEIKLLKDIERLINRVLERQEVEGFSPVHAL 380
Query: 345 PE 346
PE
Sbjct: 381 PE 382
>ASPGD|ASPL0000013201 [details] [associations]
symbol:AN4233 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
Length = 465
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 123/357 (34%), Positives = 198/357 (55%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + IP A+ G DVI A++G GKTA F L LQ P + LVL TRELAYQI
Sbjct: 72 IQSQAIPLALEGRDVIGLAETGSGKTAAFALPMLQALMEAPQTLFGLVLAPTRELAYQIS 131
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSLKN 119
FE + + ++ AV GG+++ + + + + P I+V TPGR+L L K SL+N
Sbjct: 132 QAFETLGSTI-GVRCAVIVGGMDM-VAQSIALGKKPHIIVATPGRLLDHLENTKGFSLRN 189
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
+++ +DE D++L+ +D + +I ++ P + +FSAT+S ++ + + + +P+ +
Sbjct: 190 LKYLAIDEADRLLD-MDFGESLDKIIRILPRTRHTYLFSATMSTKVESLQRASLSNPVRV 248
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V + + T+ L YI + KN L LL+ +IF +V + +L
Sbjct: 249 SVSSKYQ-TVSTLQSSYICIPHKHKNLYLVYLLNEFAGQSAIIFTTTVHETQRVAFMLRA 307
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
F +I +H +SQ RL F+ ++ ILVATD+ RG+DI V++V N+D+P +
Sbjct: 308 LGFGAIPLHGQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVFNFDLPMDSK 367
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDI-KELPE-QIDTSTYM 354
TY+HRVGR R G G+AI+FV+ D+ +V R E + K+LPE Q++ M
Sbjct: 368 TYIHRVGRTARAGKSGVAISFVTQY---DV--EVWLRIEHALSKKLPEYQVEKDEVM 419
>UNIPROTKB|E9PSX0 [details] [associations]
symbol:Ddx20 "Protein Ddx20" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:621744 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00554119
Ensembl:ENSRNOT00000020984 ArrayExpress:E9PSX0 Uniprot:E9PSX0
Length = 826
Score = 512 (185.3 bits), Expect = 1.6e-48, P = 1.6e-48
Identities = 123/358 (34%), Positives = 191/358 (53%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + IP G+D+I QAKSG GKT VF L L+L TRE+A QI
Sbjct: 88 VQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIH 147
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
+ ++ VF GG + K LK +C I VG+PGRI L L+ ++
Sbjct: 148 SVITAIGIKMEGLECHVFIGGTPLSQDKTRLK-KC-HIAVGSPGRIKQLIELDYLNPGSI 205
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
R FILDE DK+LE + + I+ P KQ++ SAT + + ++M+DP +
Sbjct: 206 RLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEILANALTRYMRDPTFVR 265
Query: 181 VDDEAKLTLHGLVQHYIKLSEL--------EKNRKLNDLLDALDFNQVVIFVKSVSRAAE 232
++ +L GL Q+Y ++ EK + L +L + FNQ ++F SRA
Sbjct: 266 LNPSDP-SLIGLKQYYQVVNSYPLAHKIFEEKTQHLQELFSKIPFNQALVFSNLHSRAQH 324
Query: 233 LNKLLVECNFPSICI--HSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVI 290
L +L FP+ CI + M+Q +RL K+ + R+L++TDL RGID E+VN+V+
Sbjct: 325 LADILSSKGFPTECISGNGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVV 384
Query: 291 NYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
N D+P +TY+HR+GRAGRFGT GL +T+ + +++ ++ + +++ LP+ I
Sbjct: 385 NLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMKIAQKCNINLLPLPDPI 442
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 126/366 (34%), Positives = 203/366 (55%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ---TEPNPGQ------VTALVLCH 51
+Q + IP + DV+ A++G GKTA F L LQ+ + P P Q + AL+L
Sbjct: 36 VQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQRLFVSRP-PLQRSAKPVIRALILTP 94
Query: 52 TRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALAR 111
TRELA Q+ + YLP +K V +GGV+IK + L+ I+V TPGR+L L
Sbjct: 95 TRELAVQVFECVRAYGKYLP-LKATVVHGGVSIKPQINHLRRGV-DILVATPGRLLDLVN 152
Query: 112 DKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKK 171
L+L V F+LDE D+ML+ + D++ I K+ P +Q ++FSAT SKEI+ + K
Sbjct: 153 QGVLNLSRVEFFVLDEADRMLD-MGFLPDIRRILKLLPESRQNLLFSATFSKEIKELTDK 211
Query: 172 FMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL-NDLLDALDFNQVVIFVKSVSRA 230
+ P I V + T + H + + ++ R+L + ++ + ++ QV++F ++ A
Sbjct: 212 LLHSPALIEV--ARRNTAAARITHVVHPVDRQRKRELLSFMIGSKNWRQVLVFTRTKHGA 269
Query: 231 AELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVI 290
L++ L S IH SQ R+ FK+G R+LVATD+ RG+DI+++ VI
Sbjct: 270 NRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIRVLVATDVAARGLDIDKLPHVI 329
Query: 291 NYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDT 350
N+++PD+A Y+HRVGR GR G+AI+ VS + +L ++ + ++P+++
Sbjct: 330 NFELPDAAKDYVHRVGRTGRASNDGVAISLVSG-DEVRLLRDIEKLLQ---SKMPQEVIP 385
Query: 351 STYMPS 356
Y PS
Sbjct: 386 G-YEPS 390
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 126/366 (34%), Positives = 203/366 (55%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ---TEPNPGQ------VTALVLCH 51
+Q + IP + DV+ A++G GKTA F L LQ+ + P P Q + AL+L
Sbjct: 36 VQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQRLFVSRP-PLQRSAKPVIRALILTP 94
Query: 52 TRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALAR 111
TRELA Q+ + YLP +K V +GGV+IK + L+ I+V TPGR+L L
Sbjct: 95 TRELAVQVFECVRAYGKYLP-LKATVVHGGVSIKPQINHLRRGV-DILVATPGRLLDLVN 152
Query: 112 DKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKK 171
L+L V F+LDE D+ML+ + D++ I K+ P +Q ++FSAT SKEI+ + K
Sbjct: 153 QGVLNLSRVEFFVLDEADRMLD-MGFLPDIRRILKLLPESRQNLLFSATFSKEIKELTDK 211
Query: 172 FMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKL-NDLLDALDFNQVVIFVKSVSRA 230
+ P I V + T + H + + ++ R+L + ++ + ++ QV++F ++ A
Sbjct: 212 LLHSPALIEV--ARRNTAAARITHVVHPVDRQRKRELLSFMIGSKNWRQVLVFTRTKHGA 269
Query: 231 AELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVI 290
L++ L S IH SQ R+ FK+G R+LVATD+ RG+DI+++ VI
Sbjct: 270 NRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIRVLVATDVAARGLDIDKLPHVI 329
Query: 291 NYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDT 350
N+++PD+A Y+HRVGR GR G+AI+ VS + +L ++ + ++P+++
Sbjct: 330 NFELPDAAKDYVHRVGRTGRASNDGVAISLVSG-DEVRLLRDIEKLLQ---SKMPQEVIP 385
Query: 351 STYMPS 356
Y PS
Sbjct: 386 G-YEPS 390
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 114/345 (33%), Positives = 195/345 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ---TEPNPGQVTALVLCHTRELAY 57
+Q + IP + DV+ +A++G GKTA F L LQQ +P ++ ALVL TRELA
Sbjct: 31 IQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQQLISVQPCKPELRALVLTPTRELAQ 90
Query: 58 QICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSL 117
Q+ F + + D+ + + YGGV+ K LK I++ TPGR+L L R + +SL
Sbjct: 91 QVHKSFCHYGQFT-DVTIGIAYGGVSTKKQISELKVGV-DILIATPGRLLDLLRTESVSL 148
Query: 118 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 177
N+ + DE D+ML+ + + ++ +I + P KQ ++FSAT + +I + K + +P
Sbjct: 149 SNIETLVFDEADRMLD-MGFKEEIDQITQYLPKTKQTLLFSATFADDIYKMSKNILVEPK 207
Query: 178 EIYVDDEAKLTLHGLVQHYIKLSELEKNRKLND-LLDALDFNQVVIFVKSVSRAAELNKL 236
+ +D++ K V+ + + ++ R+L L+ + ++ QV++F ++ A +L K
Sbjct: 208 MVEIDEKNKAADD--VEQLVYGVDADRKRELTSFLIGSRNWKQVLVFTRTKQCADDLAKE 265
Query: 237 LVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPD 296
+ + S+ IH SQ R FKEG R L+ATD+ RGIDI+ ++ VINY++P
Sbjct: 266 MTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDVAARGIDIKGLSHVINYELPY 325
Query: 297 SADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDI 341
+A+ Y+HR+GR R G GLA++ VS + +L ++ ++ +
Sbjct: 326 NAEDYVHRIGRTARAGNSGLAVSLVSPGEEW-LLTAIEELLDIQL 369
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 114/345 (33%), Positives = 195/345 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ---TEPNPGQVTALVLCHTRELAY 57
+Q + IP + DV+ +A++G GKTA F L LQQ +P ++ ALVL TRELA
Sbjct: 31 IQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQQLISVQPCKPELRALVLTPTRELAQ 90
Query: 58 QICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSL 117
Q+ F + + D+ + + YGGV+ K LK I++ TPGR+L L R + +SL
Sbjct: 91 QVHKSFCHYGQFT-DVTIGIAYGGVSTKKQISELKVGV-DILIATPGRLLDLLRTESVSL 148
Query: 118 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 177
N+ + DE D+ML+ + + ++ +I + P KQ ++FSAT + +I + K + +P
Sbjct: 149 SNIETLVFDEADRMLD-MGFKEEIDQITQYLPKTKQTLLFSATFADDIYKMSKNILVEPK 207
Query: 178 EIYVDDEAKLTLHGLVQHYIKLSELEKNRKLND-LLDALDFNQVVIFVKSVSRAAELNKL 236
+ +D++ K V+ + + ++ R+L L+ + ++ QV++F ++ A +L K
Sbjct: 208 MVEIDEKNKAADD--VEQLVYGVDADRKRELTSFLIGSRNWKQVLVFTRTKQCADDLAKE 265
Query: 237 LVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPD 296
+ + S+ IH SQ R FKEG R L+ATD+ RGIDI+ ++ VINY++P
Sbjct: 266 MTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDVAARGIDIKGLSHVINYELPY 325
Query: 297 SADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDI 341
+A+ Y+HR+GR R G GLA++ VS + +L ++ ++ +
Sbjct: 326 NAEDYVHRIGRTARAGNSGLAVSLVSPGEEW-LLTAIEELLDIQL 369
>UNIPROTKB|Q11039 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A homolog"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
ProtClustDB:CLSK791051 Uniprot:Q11039
Length = 563
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 121/355 (34%), Positives = 188/355 (52%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q IP + G DV+ A++G GKTA F + L + + ALVL TRELA Q+
Sbjct: 39 IQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLSKIDITSKVPQALVLVPTRELALQVA 98
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
F R+ YL + V YGG + + L+ Q+VVGTPGR++ L L V
Sbjct: 99 EAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA-QVVVGTPGRMIDHLERATLDLSRV 157
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+LDE D+ML ++ DV+ I TP KQV +FSAT+ IR + K++ DP E+
Sbjct: 158 DFLVLDEADEML-TMGFADDVERILSETPEYKQVALFSATMPPAIRKLSAKYLHDPFEVT 216
Query: 181 VDDEAKLTL-HGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
+AK + + Q YI+++ K L +L+ F +++FV++ E+ + L
Sbjct: 217 C--KAKTAVAENISQSYIQVAR--KMDALTRVLEVEPFEAMIVFVRTKQATEEIAEKLRA 272
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
F + I + Q +R ++G+ ILVATD+ RG+D+ER++ V+NYD+P +
Sbjct: 273 RGFSAAAISGDVPQAQRERTITALRDGDIDILVATDVAARGLDVERISHVLNYDIPHDTE 332
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKE--LPEQIDTST 352
+Y+HR+GR GR G G A+ FVS + +L ++ + E LP D +T
Sbjct: 333 SYVHRIGRTGRAGRSGAALIFVSPR-ELHLLKAIEKATRQTLTEAQLPTVEDVNT 386
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 115/322 (35%), Positives = 186/322 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + IP ++ DVI QA++G GKTA F + +++ V ALV+ TRELA Q+
Sbjct: 28 IQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEKVNVKNSAVQALVVAPTRELAIQVS 87
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E + + ++V YGG +I+ LK P ++VGTPGRI+ L L++V
Sbjct: 88 EELYKIGA-VKRVRVLPIYGGQDIERQIRALKKH-PHVIVGTPGRIIDHINRGTLRLEHV 145
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+LDE D+ML ++ D++ I P ++Q ++FSAT+ IR + ++FM +P +
Sbjct: 146 HTVVLDEADEML-NMGFIEDIEAILSHVPAERQTLLFSATMPDPIRRIAERFMNEPELVK 204
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
V + ++T+ + Q+Y+++ E +K L LLD ++F ++ R EL + L
Sbjct: 205 VKAK-EMTVPNIQQYYLEVHEKKKFDILTRLLDIQAPELAIVFGRTKRRVDELAEALNLR 263
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
+ + IH +SQ +RL+ + FKEG ILVATD+ RG+DI V V N+D+P ++
Sbjct: 264 GYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVATDVAARGLDISGVTHVYNFDIPQDPES 323
Query: 301 YLHRVGRAGRFGTKGLAITFVS 322
Y+HR+GR GR G G+A+TFV+
Sbjct: 324 YVHRIGRTGRAGKTGVAMTFVT 345
>UNIPROTKB|F1LP27 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
IPI:IPI00949972 Ensembl:ENSRNOT00000066369 ArrayExpress:F1LP27
Uniprot:F1LP27
Length = 312
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 112/301 (37%), Positives = 174/301 (57%)
Query: 52 TRELAYQICHEFERFSTYLPDIKVAVFY---GGVNIKIHKDLLKNECPQIVVGTPGRILA 108
+REL Y + ++ L D A + GG N++ L+ E P IVVGTPGR+
Sbjct: 12 SREL-YNYAFKIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFD 70
Query: 109 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 168
+ + LS K ++ F+LDE D+ML S + + EIF+ QV++ SAT+ ++ V
Sbjct: 71 MLNRRYLSPKWIKMFVLDEADEML-SRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEV 129
Query: 169 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSV 227
KKFM+DP+ I V E +LTL G+ Q YI + E K L DL + L Q VIF+ +
Sbjct: 130 TKKFMRDPIRILVKKE-ELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTR 188
Query: 228 SRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVN 287
+ L + + +F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V+
Sbjct: 189 RKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVS 248
Query: 288 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ 347
+VINYD+P + + Y+HR+GR GRFG KG+AI FV+ D IL ++ + ++E+P
Sbjct: 249 LVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTE-EDKRILRDIETFYNTTVEEMPMN 307
Query: 348 I 348
+
Sbjct: 308 V 308
>UNIPROTKB|F1MRW7 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:VEDYEHY
GeneTree:ENSGT00530000062880 EMBL:DAAA02007520 IPI:IPI00867090
UniGene:Bt.13425 Ensembl:ENSBTAT00000024914 Uniprot:F1MRW7
Length = 825
Score = 509 (184.2 bits), Expect = 3.4e-48, P = 3.4e-48
Identities = 124/357 (34%), Positives = 188/357 (52%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + IP G+D+I QAKSG GKT VF L L+L TRE+A QI
Sbjct: 88 VQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIH 147
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
+ ++ VF GG + K LK +C I VG+PGRI L L+ ++
Sbjct: 148 SVITAIGIKMEGLECHVFIGGTPLSQDKTRLK-KC-HIAVGSPGRIKQLIELDYLNPGSI 205
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
R FILDE DK+LE + + I+ P KQ++ SAT + + K+M++P +
Sbjct: 206 RLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMREPTFVR 265
Query: 181 VDDEAKLTLHGLVQHYI---------KLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAA 231
++ +L GL Q+Y K+ E EK + L +L + FNQ ++F SRA
Sbjct: 266 LNSSDP-SLIGLKQYYKIVNSYPLAHKIFE-EKTQHLQELFSKIPFNQALVFSNLHSRAQ 323
Query: 232 ELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVIN 291
L +L FP+ I M Q RL K+ + R+L++TDL RGID E+VN+V+N
Sbjct: 324 HLADILSSKGFPAEYISGNMDQNRRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVN 383
Query: 292 YDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 348
D+P +TY+HR+GRAGRFGT GL +T+ + +++ ++ + +++ LP+ I
Sbjct: 384 LDVPLDCETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMKIAQKCTINLLPLPDPI 440
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 112/329 (34%), Positives = 179/329 (54%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ------TEPNPGQVTALVLCHTRE 54
+Q IP + G DV+ A +G GKTA F L LQ+ + + G V LVL TRE
Sbjct: 35 VQAATIPAVLSGRDVLAGANTGSGKTAAFALPLLQRLSEAKSADKSAGVVRCLVLVPTRE 94
Query: 55 LAYQICHEFERFSTYLP-DIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 113
LA Q+ F ++++ +K+ +GGV++ + L+ ++V TPGR+L L
Sbjct: 95 LAQQVADSFLSYASHFNGQLKIVAAFGGVSVNLQMQSLRAGA-DVLVATPGRLLDLLASN 153
Query: 114 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 173
L L V F+LDE D+ML SL +++++ P KQ ++FSAT +E+R + K +
Sbjct: 154 ALKLTQVSAFVLDEADRML-SLGFTEELEQVLAALPRQKQTLLFSATFPEEVRALTTKLL 212
Query: 174 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 233
P+E ++ E + T+ Q I ++ +K L L+ ++Q +IFV + + L
Sbjct: 213 HQPLEYHLQSEQESTIE---QRVITVNREQKTALLAHLIKQHQWSQALIFVSAKNTCNHL 269
Query: 234 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 293
+ L + + H +Q R GFK G +L+ATD+ RGIDI+++ +VIN+D
Sbjct: 270 AQKLSKRGISAEVFHGDKAQGARTRVLDGFKNGEISVLIATDIAARGIDIDKLPVVINFD 329
Query: 294 MPDSADTYLHRVGRAGRFGTKGLAITFVS 322
+P S Y+HR+GR+GR G GLA+T +S
Sbjct: 330 LPRSPADYMHRIGRSGRAGEAGLAVTLIS 358
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 112/329 (34%), Positives = 179/329 (54%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ------TEPNPGQVTALVLCHTRE 54
+Q IP + G DV+ A +G GKTA F L LQ+ + + G V LVL TRE
Sbjct: 35 VQAATIPAVLSGRDVLAGANTGSGKTAAFALPLLQRLSEAKSADKSAGVVRCLVLVPTRE 94
Query: 55 LAYQICHEFERFSTYLP-DIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 113
LA Q+ F ++++ +K+ +GGV++ + L+ ++V TPGR+L L
Sbjct: 95 LAQQVADSFLSYASHFNGQLKIVAAFGGVSVNLQMQSLRAGA-DVLVATPGRLLDLLASN 153
Query: 114 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 173
L L V F+LDE D+ML SL +++++ P KQ ++FSAT +E+R + K +
Sbjct: 154 ALKLTQVSAFVLDEADRML-SLGFTEELEQVLAALPRQKQTLLFSATFPEEVRALTTKLL 212
Query: 174 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 233
P+E ++ E + T+ Q I ++ +K L L+ ++Q +IFV + + L
Sbjct: 213 HQPLEYHLQSEQESTIE---QRVITVNREQKTALLAHLIKQHQWSQALIFVSAKNTCNHL 269
Query: 234 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 293
+ L + + H +Q R GFK G +L+ATD+ RGIDI+++ +VIN+D
Sbjct: 270 AQKLSKRGISAEVFHGDKAQGARTRVLDGFKNGEISVLIATDIAARGIDIDKLPVVINFD 329
Query: 294 MPDSADTYLHRVGRAGRFGTKGLAITFVS 322
+P S Y+HR+GR+GR G GLA+T +S
Sbjct: 330 LPRSPADYMHRIGRSGRAGEAGLAVTLIS 358
>UNIPROTKB|Q9NZE6 [details] [associations]
symbol:EIF4A2 "BM-010" species:9606 "Homo sapiens"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CH471052 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
HOVERGEN:HBG107989 HSSP:P10081 EMBL:AC112907 UniGene:Hs.518475
UniGene:Hs.599481 HGNC:HGNC:3284 ChiTaRS:EIF4A2 EMBL:AF208852
IPI:IPI00030296 SMR:Q9NZE6 STRING:Q9NZE6 Ensembl:ENST00000356531
UCSC:uc003fqv.3 Uniprot:Q9NZE6
Length = 312
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 111/301 (36%), Positives = 175/301 (58%)
Query: 52 TRELAYQICHEFERFSTYLPDIKVAVFY---GGVNIKIHKDLLKNECPQIVVGTPGRILA 108
+REL + + + ++ L D A + GG N++ L+ E P IVVGTPGR+
Sbjct: 12 SRELLFPVL-KIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFD 70
Query: 109 LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 168
+ + LS K ++ F+LDE D+ML S + + EIF+ QV++ SAT+ ++ V
Sbjct: 71 MLNRRYLSPKWIKMFVLDEADEML-SRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEV 129
Query: 169 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSV 227
KKFM+DP+ I V E +LTL G+ Q YI + E K L DL + L Q VIF+ +
Sbjct: 130 TKKFMRDPIRILVKKE-ELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTR 188
Query: 228 SRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVN 287
+ L + + +F +H M Q+ER + F+ G+ R+L+ TDL+ RGID+++V+
Sbjct: 189 RKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVS 248
Query: 288 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ 347
+VINYD+P + + Y+HR+GR GRFG KG+AI FV+ D IL ++ + ++E+P
Sbjct: 249 LVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTE-EDKRILRDIETFYNTTVEEMPMN 307
Query: 348 I 348
+
Sbjct: 308 V 308
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 122/337 (36%), Positives = 186/337 (55%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQ------VTALVLCHTRE 54
+Q + IP I G DV+ A++G GKTA F L LQ+ + G V AL+L TRE
Sbjct: 32 IQAQAIPAVISGRDVMAAAQTGTGKTAGFTLPLLQRLSSSKGNKVSSNNVRALILTPTRE 91
Query: 55 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDK 113
LA QI E + YL ++ V +GGV KI+ + + + ++V TPGR+L L +
Sbjct: 92 LAAQISESIEVYGKYL-NLHSMVVFGGV--KINPQIARLRQGVDVLVATPGRLLDLYNQR 148
Query: 114 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 173
+ + FILDE D+ML+ + RD++++ P D+Q ++FSAT S EIR + K +
Sbjct: 149 AVKFSQLEVFILDEADRMLD-MGFIRDIKKLMTALPKDRQNLLFSATFSPEIRALAKGMV 207
Query: 174 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 233
+P+EI VD E T + Q + + K L L+ ++ QV++F K+ A +L
Sbjct: 208 NNPLEISVDAENS-TAEKVTQWLTAVDKKRKPAVLTHLIKENNWQQVLVFTKTKHGANKL 266
Query: 234 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 293
K L + IH SQ R FK+G+ +ILVATD+ RGIDI+ + V+N+D
Sbjct: 267 TKHLEAEGLTAAAIHGNKSQGARTKALAAFKDGSVKILVATDIAARGIDIDLLPQVVNFD 326
Query: 294 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDIL 330
+P+ + Y+HR+GR R G G A++ V A + D+L
Sbjct: 327 LPNVPEDYVHRIGRTARAGNTGQALSLVC-ADELDLL 362
>ZFIN|ZDB-GENE-031030-3 [details] [associations]
symbol:ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
49" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-3 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K14778
HOVERGEN:HBG100512 CTD:54555 EMBL:BC047834 IPI:IPI00551936
RefSeq:NP_938179.1 UniGene:Dr.77634 ProteinModelPortal:Q7ZUT9
STRING:Q7ZUT9 GeneID:386632 KEGG:dre:386632 InParanoid:Q7ZUT9
NextBio:20813961 ArrayExpress:Q7ZUT9 Uniprot:Q7ZUT9
Length = 468
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 122/353 (34%), Positives = 192/353 (54%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q +CIP + G D + AK+G GKTA FVL LQ+ +P V LVL TRELAYQI
Sbjct: 28 VQEKCIPAILDGRDCMGCAKTGSGKTAAFVLPVLQKLSEDPYGVFCLVLTPTRELAYQIA 87
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD-LSLKN 119
+F L +K + GG+++ + + L ++ P +VV TPGR+ R D ++L
Sbjct: 88 EQFRVLGKPL-GLKDCIIVGGMDM-VTQGLELSKKPHVVVATPGRLADHIRSSDTINLNR 145
Query: 120 VRHFILDECDKMLES--LDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 177
++ I+DE D++LE D +D++ I P +Q ++FSATL+ ++ + M P
Sbjct: 146 IQFLIMDEADRLLEQGCTDFTKDLEVILSAVPAKRQTLLFSATLTDTLQQLQSIAMNRPF 205
Query: 178 EIYVDDEAKL-TLHGLVQHYIKLSELEKNRKLNDLL----DALDFNQVVIFVKSVSRAAE 232
+ + ++ + T+ L Q +I E K+ L L+ D D ++IF +
Sbjct: 206 --FWEHKSDVQTVEELDQRFILTPEKVKDAYLVHLIQTFQDEHDDWSIIIFTNTCKSCQI 263
Query: 233 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 292
L +L E NFP+I +HS M Q +R FK +IL+ATD+ RG+DI V +VIN+
Sbjct: 264 LTMMLREFNFPTISLHSMMKQRQRFANLAKFKSNVFKILIATDVAARGLDIPTVQVVINH 323
Query: 293 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELP 345
+ P Y+HRVGR R G G++IT V+ D ++N ++ + + +KE P
Sbjct: 324 NTPGLPKIYIHRVGRTARAGRNGVSITLVTQY-DIHLINAIEEQNQTKLKEFP 375
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 111/327 (33%), Positives = 181/327 (55%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + IP + DVI QA++G GKTA F + +++ P + A+V+ TRELA Q+
Sbjct: 29 IQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVEKINPESPNIQAIVIAPTRELAIQVS 88
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E + KV YGG +I LK P I+VGTPGR+L + + L NV
Sbjct: 89 EELYKIGQD-KRAKVLPIYGGQDIGRQIRALKKN-PNIIVGTPGRLLDHINRRTIRLNNV 146
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
++DE D+ML ++ D++ I P + Q ++FSAT+ I+ + ++FM +P +
Sbjct: 147 NTVVMDEADEML-NMGFIDDIESILSNVPSEHQTLLFSATMPAPIKRIAERFMTEPEHVK 205
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
V + ++T+ + Q Y+++ E +K L LLD ++F ++ R EL + L
Sbjct: 206 VKAK-EMTVSNIQQFYLEVQERKKFDTLTRLLDIQSPELAIVFGRTKRRVDELAEALNLR 264
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
+ + IH ++Q +R+ + FKEG +LVATD+ RG+DI V V N+D+P ++
Sbjct: 265 GYAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATDVAARGLDISGVTHVYNFDVPQDPES 324
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDS 327
Y+HR+GR GR G G+A+TF++ S
Sbjct: 325 YVHRIGRTGRAGKTGMAMTFITPREKS 351
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 110/334 (32%), Positives = 186/334 (55%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + IP + DVI QA++G GKTA F + +++ P + A+V+ TRELA Q+
Sbjct: 29 IQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVEKINPESPNIQAIVIAPTRELAIQVS 88
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E + +V YGG +I LK P I+VGTPGR+L + + L+ V
Sbjct: 89 EELYKIGQD-KRARVLPIYGGQDIGRQIRALKKN-PHIIVGTPGRLLDHINRRTMRLQTV 146
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+LDE D+ML ++ D++ I P + Q ++FSAT+ I+ + ++FM +P +
Sbjct: 147 NTVVLDEADEML-NMGFIEDIESILSNVPAEHQTLLFSATMPAPIKRIAERFMTNPEHVK 205
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
V + ++T+ + Q Y+++ E +K L LLD ++F ++ R EL + L
Sbjct: 206 VKAK-EMTVSNIQQFYLEVHERKKFDTLTRLLDIQSPELAIVFGRTKRRVDELTEALNLR 264
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
+ + IH ++Q +R+ + FK+G +LVATD+ RG+DI V V N+D+P ++
Sbjct: 265 GYTAEGIHGDLTQAKRMVALRKFKQGAIEVLVATDVAARGLDISGVTHVYNFDVPQDPES 324
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQ 334
Y+HR+GR GR G G+A+TF++ + D+L ++
Sbjct: 325 YVHRIGRTGRAGKTGMAMTFITPR-EKDMLRAIE 357
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 109/324 (33%), Positives = 186/324 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ-TEPNPGQVTALVLCHTRELAYQI 59
+Q I + G D++ QA++G GKT F L L + T Q+ LVL TRELA Q+
Sbjct: 32 IQSASIDPLMAGKDILGQAQTGTGKTGAFALPLLNKVTSQTTPQI--LVLAPTRELAVQV 89
Query: 60 CHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKN 119
F ++ ++ + V YGG +++ + LK PQ++VGTPGR++ R L L+
Sbjct: 90 AEAFSSYAKFMKNFHVLPIYGGQSMQQQLNALKRG-PQVIVGTPGRVMDHMRRGTLKLET 148
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
++ +LDE D+ML+ + D++ I + TP +Q+ +FSAT+ ++I+ V K +++ I
Sbjct: 149 LQALVLDEADEMLK-MGFIDDIEWILEHTPPQRQLALFSATMPEQIKRVANKHLKNATNI 207
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
+ + T+ + Q ++++S+ K L +L+ + ++IFV++ + EL + L
Sbjct: 208 SIA-ASHTTVDSIEQRFVQVSQHNKLEALVRVLEVENTEGIIIFVRTRNSCVELAEKLEA 266
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
+ S +H M+Q+ R + K G IL+ATD+ RG+D+ER+ V+NYD+P +
Sbjct: 267 RGYASSPLHGDMNQQARERAVEQLKNGKLDILIATDVAARGLDVERIGHVVNYDIPYDTE 326
Query: 300 TYLHRVGRAGRFGTKGLAITFVSS 323
Y+HR+GR GR G G+AI FV+S
Sbjct: 327 AYVHRIGRTGRAGRTGMAILFVTS 350
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 119/334 (35%), Positives = 185/334 (55%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA-----LVLCHTREL 55
+Q ECIP I G D++ A++G GKTA F L + + N + A L+L TREL
Sbjct: 28 IQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINKFGRNKIDIKAKSTRSLILTPTREL 87
Query: 56 AYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDL 115
A QI + +S L +K V YGGV + D ++ I+V TPGR+L L D+
Sbjct: 88 ASQIMQNIDDYSDGL-GLKTKVVYGGVGRQAQVDSIELGL-DILVATPGRLLDLIETGDI 145
Query: 116 SLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQD 175
+ K + F+LDE D ML+ + +DVQ I P +Q ++FSAT+ EI + + + D
Sbjct: 146 NFKALEVFVLDEADTMLD-MGFFKDVQSIISKLPKSRQTLLFSATMPAEIEILAEAILTD 204
Query: 176 PMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNK 235
P +I + E +T+ + Q L + K L ++L D+ +V+IF K+ A + K
Sbjct: 205 PTKIQITAET-VTIDLVNQSVYHLDKSNKVPLLFNILTKADYEKVLIFCKTKYGADIIVK 263
Query: 236 LLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMP 295
L + + + +HSG +Q R + FK+ R+LVATD+ RGID++ + +VINY++P
Sbjct: 264 ALEKASITAASLHSGKTQAVREEALQNFKDSTLRVLVATDVAARGIDVDNITLVINYNLP 323
Query: 296 DSADTYLHRVGRAGRFGTKGLAITFVSSASDSDI 329
+ Y+HR+GR R G G+AI+F A ++DI
Sbjct: 324 EDPRNYIHRIGRTARAGKSGMAISF---AVENDI 354
>UNIPROTKB|F1NA53 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 EMBL:AADN02071779 EMBL:AADN02071780
IPI:IPI00684751 ProteinModelPortal:F1NA53
Ensembl:ENSGALT00000004949 ArrayExpress:F1NA53 Uniprot:F1NA53
Length = 402
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 119/350 (34%), Positives = 188/350 (53%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q CIP + G D + AK+G GKTA FVL LQ +P + LVL TRELAYQI
Sbjct: 28 VQASCIPPILQGRDCLGCAKTGSGKTAAFVLPVLQVLSEDPYGIFCLVLTPTRELAYQIA 87
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD-LSLKN 119
+F L +K V GG+++ + + L + P +V+ TPGR+ R + SLK
Sbjct: 88 EQFRVLGKPL-GLKDCVVVGGLDM-VAQALELSRKPHVVIATPGRLADHLRSSNTFSLKK 145
Query: 120 VRHFILDECDKMLES--LDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 177
++ +LDE D++LE D D++ I + P +Q ++FSATL+ + + M P
Sbjct: 146 LKFLVLDEADRLLEQGCADFTADLEVILEAVPARRQTLLFSATLTDTLNELKSLAMNRPF 205
Query: 178 EIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL-DFNQ---VVIFVKSVSRAAEL 233
E + T+ L Q Y+ + E K+ L L+ D ++ ++IF K+ L
Sbjct: 206 FWEAASEVR-TVDELDQRYLLVPEAVKDAYLVHLIQTFQDEHEDWSIIIFTKTCKECQIL 264
Query: 234 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 293
N +L + +FPS+ +HS M Q +R FK +IL+ATD+ RG+DI V +VIN++
Sbjct: 265 NMMLRKFSFPSVALHSMMKQRQRFAALAKFKSSIFKILIATDVAARGLDIPTVQVVINHN 324
Query: 294 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKE 343
P Y+HRVGR R G G++IT V+ D +++ ++ ++ ++E
Sbjct: 325 TPGLPKIYIHRVGRTARAGRNGISITMVTQY-DIHLVHAIEEEIKLKLQE 373
>UNIPROTKB|F1NYX0 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 OMA:CQLLSMT EMBL:AADN02071779
EMBL:AADN02071780 IPI:IPI00822654 Ensembl:ENSGALT00000035055
ArrayExpress:F1NYX0 Uniprot:F1NYX0
Length = 482
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 119/350 (34%), Positives = 188/350 (53%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q CIP + G D + AK+G GKTA FVL LQ +P + LVL TRELAYQI
Sbjct: 31 VQASCIPPILQGRDCLGCAKTGSGKTAAFVLPVLQVLSEDPYGIFCLVLTPTRELAYQIA 90
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD-LSLKN 119
+F L +K V GG+++ + + L + P +V+ TPGR+ R + SLK
Sbjct: 91 EQFRVLGKPL-GLKDCVVVGGLDM-VAQALELSRKPHVVIATPGRLADHLRSSNTFSLKK 148
Query: 120 VRHFILDECDKMLES--LDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 177
++ +LDE D++LE D D++ I + P +Q ++FSATL+ + + M P
Sbjct: 149 LKFLVLDEADRLLEQGCADFTADLEVILEAVPARRQTLLFSATLTDTLNELKSLAMNRPF 208
Query: 178 EIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDAL-DFNQ---VVIFVKSVSRAAEL 233
E + T+ L Q Y+ + E K+ L L+ D ++ ++IF K+ L
Sbjct: 209 FWEAASEVR-TVDELDQRYLLVPEAVKDAYLVHLIQTFQDEHEDWSIIIFTKTCKECQIL 267
Query: 234 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 293
N +L + +FPS+ +HS M Q +R FK +IL+ATD+ RG+DI V +VIN++
Sbjct: 268 NMMLRKFSFPSVALHSMMKQRQRFAALAKFKSSIFKILIATDVAARGLDIPTVQVVINHN 327
Query: 294 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKE 343
P Y+HRVGR R G G++IT V+ D +++ ++ ++ ++E
Sbjct: 328 TPGLPKIYIHRVGRTARAGRNGISITMVTQY-DIHLVHAIEEEIKLKLQE 376
>CGD|CAL0000864 [details] [associations]
symbol:DRS1 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864 GO:GO:0005524
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0035690
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_719395.1 ProteinModelPortal:Q5ACK7
STRING:Q5ACK7 GeneID:3639045 KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 110/331 (33%), Positives = 192/331 (58%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVT-ALVLCHTRELAYQI 59
+Q IP A+LG D++ A++G GKT +++ +++ P T ++L TRELA Q+
Sbjct: 156 IQSASIPIALLGKDIVAGAQTGSGKTGAYMIPIIERLLYKPSTSTKVIILTPTRELALQV 215
Query: 60 CHEF-ERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK-DLSL 117
+EF ++ S ++ ++ + + GG+N++ ++ LK P IV+ TPGR++ R+ S+
Sbjct: 216 -YEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTR-PDIVIATPGRLIDHIRNSPSFSV 273
Query: 118 KNVRHFILDECDKMLESLDMRRDVQEIFKMTP-HDKQVMMFSATLSKEIRPVCKKFMQDP 176
++++ ++DE D+MLE + ++ EI + P H +Q ++FSAT++ I+ + + +Q P
Sbjct: 274 QDIQVLVIDEADRMLEE-GFQDELTEILSLIPKHKRQTLLFSATMNTRIQDLIQLSLQKP 332
Query: 177 MEIYVDDEAKLTLHGLVQHYIKLSELE--KNRKLNDLLDALDFNQVVIFVKSVSRAAELN 234
+ I +D K L+Q ++++ + + K L LL + ++VV+FV A L
Sbjct: 333 VRIMIDPP-KSVASKLLQQFVRIRKRDQLKPALLYQLLKGVS-SRVVVFVARKETAHRLR 390
Query: 235 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 294
+L +H ++QE+RL K FK +L+ TDL RG+DI ++ +VINYDM
Sbjct: 391 IVLGLLGLKVSELHGALTQEQRLQNVKNFKSLEVPVLICTDLAARGLDIPKIELVINYDM 450
Query: 295 PDSADTYLHRVGRAGRFGTKGLAITFVSSAS 325
P + + YLHRVGR R G G +ITFV +S
Sbjct: 451 PKTFEIYLHRVGRTARAGRDGTSITFVGESS 481
>UNIPROTKB|Q5ACK7 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864
GO:GO:0005524 GO:GO:0005730 GO:GO:0042254 GO:GO:0003723
GO:GO:0035690 EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K13181 RefSeq:XP_719395.1
ProteinModelPortal:Q5ACK7 STRING:Q5ACK7 GeneID:3639045
KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 110/331 (33%), Positives = 192/331 (58%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVT-ALVLCHTRELAYQI 59
+Q IP A+LG D++ A++G GKT +++ +++ P T ++L TRELA Q+
Sbjct: 156 IQSASIPIALLGKDIVAGAQTGSGKTGAYMIPIIERLLYKPSTSTKVIILTPTRELALQV 215
Query: 60 CHEF-ERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK-DLSL 117
+EF ++ S ++ ++ + + GG+N++ ++ LK P IV+ TPGR++ R+ S+
Sbjct: 216 -YEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTR-PDIVIATPGRLIDHIRNSPSFSV 273
Query: 118 KNVRHFILDECDKMLESLDMRRDVQEIFKMTP-HDKQVMMFSATLSKEIRPVCKKFMQDP 176
++++ ++DE D+MLE + ++ EI + P H +Q ++FSAT++ I+ + + +Q P
Sbjct: 274 QDIQVLVIDEADRMLEE-GFQDELTEILSLIPKHKRQTLLFSATMNTRIQDLIQLSLQKP 332
Query: 177 MEIYVDDEAKLTLHGLVQHYIKLSELE--KNRKLNDLLDALDFNQVVIFVKSVSRAAELN 234
+ I +D K L+Q ++++ + + K L LL + ++VV+FV A L
Sbjct: 333 VRIMIDPP-KSVASKLLQQFVRIRKRDQLKPALLYQLLKGVS-SRVVVFVARKETAHRLR 390
Query: 235 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 294
+L +H ++QE+RL K FK +L+ TDL RG+DI ++ +VINYDM
Sbjct: 391 IVLGLLGLKVSELHGALTQEQRLQNVKNFKSLEVPVLICTDLAARGLDIPKIELVINYDM 450
Query: 295 PDSADTYLHRVGRAGRFGTKGLAITFVSSAS 325
P + + YLHRVGR R G G +ITFV +S
Sbjct: 451 PKTFEIYLHRVGRTARAGRDGTSITFVGESS 481
>UNIPROTKB|I3L976 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF Ensembl:ENSSSCT00000025539 Uniprot:I3L976
Length = 456
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 111/325 (34%), Positives = 188/325 (57%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D+I A++G GKT F L L P ++ ALVL TRELA+QI
Sbjct: 49 IQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQIS 108
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSLKN 119
+FE + + ++ AV GG++ + + L + P IV+ TPGR++ L K +L+
Sbjct: 109 EQFEALGSSI-GVQCAVIVGGID-SMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRA 166
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
+++ ++DE D++L ++D +V +I K+ P D++ +FSAT++K+++ + + +++P++
Sbjct: 167 LKYLVMDEADRIL-NMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKC 225
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V + + T+ L Q+Y+ + K+ L +L+ L N +IF + + LL
Sbjct: 226 AVSSKYQ-TVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRN 284
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
F +I +H MSQ +RL FK + IL+ATD+ RG+DI V++V+N+D+P +
Sbjct: 285 LGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSK 344
Query: 300 TYLHRVGRAGRFGT--KGLAITFVS 322
Y+HRVGR R G A+TF S
Sbjct: 345 DYIHRVGRTARAGRCWSQRAVTFPS 369
>RGD|1311124 [details] [associations]
symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 49"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1311124 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 IPI:IPI00362462 PRIDE:E9PTF0
Ensembl:ENSRNOT00000004891 UCSC:RGD:1311124 Uniprot:E9PTF0
Length = 480
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 120/352 (34%), Positives = 189/352 (53%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q CIP + G D + AK+G GKTA FVL LQ+ +P + LVL TRELAYQI
Sbjct: 28 VQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDPYGIFCLVLTPTRELAYQIA 87
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD-LSLKN 119
+F L +K + GG+++ + + L + P +V+ TPGR+ R + ++K
Sbjct: 88 EQFRVLGKPL-GLKDCIIVGGMDM-VTQALELSRKPHVVIATPGRLADHLRSSNTFNMKK 145
Query: 120 VRHFILDECDKMLES--LDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 177
+R +LDE D++LE D D++ I P +Q ++FSATL+ ++ + P
Sbjct: 146 IRFLVLDEADRLLEQGCTDFTADLETILSAVPARRQTLLFSATLTDTLKELQGLATNQPF 205
Query: 178 EIYVDDEAKL-TLHGLVQHYIKLSELEKNRKLNDLL----DALDFNQVVIFVKSVSRAAE 232
+ + +A + T+ L Q Y+ + E K+ L L+ D L+ ++IF +
Sbjct: 206 --FWEAQATVRTVEQLDQRYLLVPEKVKDAYLVHLVQTFQDQLEDCSIIIFTNTCKTCQI 263
Query: 233 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 292
L +L + NFP++ +HS M Q+ER FK RIL+ATD+ RG+DI V +VIN+
Sbjct: 264 LCMMLRKFNFPTVALHSMMKQKERFAALARFKSSTYRILIATDVASRGLDIPTVQVVINH 323
Query: 293 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKEL 344
+ P Y+HRVGR R G +G AIT V+ D +L+ ++ + + EL
Sbjct: 324 NTPGLPKIYIHRVGRTARAGRQGQAITLVTQY-DIHLLHAIEEEIKQQLAEL 374
>UNIPROTKB|Q8EGU0 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 112/338 (33%), Positives = 187/338 (55%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQ---VTALVLCHTRELAY 57
+Q + IP A++G D++ A++G GKTA F L L+Q P + ALV+ TRELA
Sbjct: 27 VQQQVIPLALVGKDIMACAQTGTGKTAAFALPVLEQLAAKPADKPLLRALVMTPTRELAI 86
Query: 58 QICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSL 117
Q+C +++S +LP +K YGG N+ + ++ I+V TPGR+ + +L L
Sbjct: 87 QVCANIQKYSQFLP-LKTLAVYGGANMNPQRKGVEQGV-DILVATPGRLFDIIGQFNLDL 144
Query: 118 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 177
+V ++DE D+ML+ L RD++++ ++ Q M+FSAT S ++ + K + P
Sbjct: 145 SSVTTLVIDEADRMLD-LGFVRDIEKVKRLIAPVHQTMLFSATYSDAVKQLSHKMLNQPQ 203
Query: 178 EIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL 237
+ V + T + Q ++ + K L++L+ ++ QV++F + A L + L
Sbjct: 204 WVNVAENT--TASTVEQLVYRVDKRRKAELLSELVGRNNWRQVLVFASTKECAEHLLQEL 261
Query: 238 VECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 297
+ H +Q R FK G R+LVATD+ RG+DI+ + +VIN ++P
Sbjct: 262 TLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVLVATDVAARGLDIQALPLVINLELPFL 321
Query: 298 ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQA 335
A+ Y+HR+GR GR G G AI+FVS A D ++L +++A
Sbjct: 322 AEDYVHRIGRTGRAGLSGRAISFVSPADD-EMLAEIEA 358
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 114/327 (34%), Positives = 173/327 (52%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVT-----ALVLCHTREL 55
+Q + IP G DV+ A++G GKTA F L LQ+ NP + L+L TREL
Sbjct: 27 IQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQKMVENPSETLKSNTRVLILTPTREL 86
Query: 56 AYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDL 115
A Q+ E +S YL + V YGGV ++ LK I+V TPGR+L +L
Sbjct: 87 AAQVAENVEAYSKYL-NFSVLTIYGGVKVETQAQKLKRGA-DIIVATPGRLLEHLTACNL 144
Query: 116 SLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQD 175
SL +V +LDE D+ML+ + D+Q+I + +Q ++FSAT S ++ + + M
Sbjct: 145 SLSSVDFLVLDEADRMLD-MGFSADIQKILQAVNKKRQNLLFSATFSSAVKKLANEMMIK 203
Query: 176 PMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNK 235
P I D + T + Q + + K L++L+ ++ QV++F + A L K
Sbjct: 204 PQVISADKQ-NTTADTVSQVVYPVEQRRKRELLSELIGKKNWQQVLVFTATRDAADTLVK 262
Query: 236 LLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMP 295
L PS +H +Q R + F G R+LVAT++ RG+DI + V+N+D+P
Sbjct: 263 ELNLDGIPSEVVHGEKAQGSRRRALREFVSGKVRVLVATEVAARGLDIPSLEYVVNFDLP 322
Query: 296 DSADTYLHRVGRAGRFGTKGLAITFVS 322
A+ Y+HR+GR GR G G+AI+FVS
Sbjct: 323 FLAEDYVHRIGRTGRAGKSGVAISFVS 349
>TIGR_CMR|SO_1501 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 112/338 (33%), Positives = 187/338 (55%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQ---VTALVLCHTRELAY 57
+Q + IP A++G D++ A++G GKTA F L L+Q P + ALV+ TRELA
Sbjct: 27 VQQQVIPLALVGKDIMACAQTGTGKTAAFALPVLEQLAAKPADKPLLRALVMTPTRELAI 86
Query: 58 QICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSL 117
Q+C +++S +LP +K YGG N+ + ++ I+V TPGR+ + +L L
Sbjct: 87 QVCANIQKYSQFLP-LKTLAVYGGANMNPQRKGVEQGV-DILVATPGRLFDIIGQFNLDL 144
Query: 118 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 177
+V ++DE D+ML+ L RD++++ ++ Q M+FSAT S ++ + K + P
Sbjct: 145 SSVTTLVIDEADRMLD-LGFVRDIEKVKRLIAPVHQTMLFSATYSDAVKQLSHKMLNQPQ 203
Query: 178 EIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL 237
+ V + T + Q ++ + K L++L+ ++ QV++F + A L + L
Sbjct: 204 WVNVAENT--TASTVEQLVYRVDKRRKAELLSELVGRNNWRQVLVFASTKECAEHLLQEL 261
Query: 238 VECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 297
+ H +Q R FK G R+LVATD+ RG+DI+ + +VIN ++P
Sbjct: 262 TLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVLVATDVAARGLDIQALPLVINLELPFL 321
Query: 298 ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQA 335
A+ Y+HR+GR GR G G AI+FVS A D ++L +++A
Sbjct: 322 AEDYVHRIGRTGRAGLSGRAISFVSPADD-EMLAEIEA 358
>GENEDB_PFALCIPARUM|PFB0860c [details] [associations]
symbol:PFB0860c "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AE001362
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802 HSSP:P10081
KO:K14777 PIR:C71604 RefSeq:XP_001349688.1
ProteinModelPortal:O96264 EnsemblProtists:PFB0860c:mRNA
GeneID:812770 KEGG:pfa:PFB0860c EuPathDB:PlasmoDB:PF3D7_0218400
OMA:KHRAKRV ProtClustDB:CLSZ2432676 Uniprot:O96264
Length = 562
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 117/356 (32%), Positives = 191/356 (53%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E +P A L D+I +++G GKTA F++ LQ + N ALV+ TREL QI
Sbjct: 182 IQREILPHAFLKKDIIGLSETGSGKTACFIIPILQDLKVNKQSFYALVISPTRELCIQIS 241
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSLKN 119
F+ L I + YGGV+I + + L + P ++V TPGRIL L K +LKN
Sbjct: 242 QNFQALGMNLL-INICTIYGGVDI-VTQSLNLAKKPNVIVSTPGRILDHLNNTKGFNLKN 299
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
+++ + DE DK+L S D + ++ + P ++ +FSAT++K + + K +++P+++
Sbjct: 300 LKYLVFDEADKLL-SQDFESSINKLLLILPPNRITFLFSATMTKNVAKLKKACLKNPVKV 358
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V ++ T+ L++ YI L K L+ L ++IF + + A +LN
Sbjct: 359 EVSNKYS-TVSTLIETYIFLPLKYKYTYLSSLCFHYQTRNIIIFTNTCATAQKLNFFCRN 417
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
SIC+H ++Q +RL+ FK IL++T + RG+D++ + IVIN+D+ S
Sbjct: 418 LGLKSICLHGKLTQNQRLSSLNSFKVNKYNILISTQVGARGLDLQDIKIVINFDIC-SCK 476
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILN-QVQARFEVD-IKELPEQIDTSTY 353
Y+HRVGR R G G +ITFV+ + L + Q ++D +L E D Y
Sbjct: 477 EYIHRVGRTARAGRSGKSITFVTQYDVENFLAIEKQLNKKIDKFTDLDEN-DVLLY 531
>UNIPROTKB|O96264 [details] [associations]
symbol:PFB0860c "DEAD/DEAH box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AE001362 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 HSSP:P10081 KO:K14777 PIR:C71604
RefSeq:XP_001349688.1 ProteinModelPortal:O96264
EnsemblProtists:PFB0860c:mRNA GeneID:812770 KEGG:pfa:PFB0860c
EuPathDB:PlasmoDB:PF3D7_0218400 OMA:KHRAKRV ProtClustDB:CLSZ2432676
Uniprot:O96264
Length = 562
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 117/356 (32%), Positives = 191/356 (53%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E +P A L D+I +++G GKTA F++ LQ + N ALV+ TREL QI
Sbjct: 182 IQREILPHAFLKKDIIGLSETGSGKTACFIIPILQDLKVNKQSFYALVISPTRELCIQIS 241
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSLKN 119
F+ L I + YGGV+I + + L + P ++V TPGRIL L K +LKN
Sbjct: 242 QNFQALGMNLL-INICTIYGGVDI-VTQSLNLAKKPNVIVSTPGRILDHLNNTKGFNLKN 299
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
+++ + DE DK+L S D + ++ + P ++ +FSAT++K + + K +++P+++
Sbjct: 300 LKYLVFDEADKLL-SQDFESSINKLLLILPPNRITFLFSATMTKNVAKLKKACLKNPVKV 358
Query: 180 YVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE 239
V ++ T+ L++ YI L K L+ L ++IF + + A +LN
Sbjct: 359 EVSNKYS-TVSTLIETYIFLPLKYKYTYLSSLCFHYQTRNIIIFTNTCATAQKLNFFCRN 417
Query: 240 CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD 299
SIC+H ++Q +RL+ FK IL++T + RG+D++ + IVIN+D+ S
Sbjct: 418 LGLKSICLHGKLTQNQRLSSLNSFKVNKYNILISTQVGARGLDLQDIKIVINFDIC-SCK 476
Query: 300 TYLHRVGRAGRFGTKGLAITFVSSASDSDILN-QVQARFEVD-IKELPEQIDTSTY 353
Y+HRVGR R G G +ITFV+ + L + Q ++D +L E D Y
Sbjct: 477 EYIHRVGRTARAGRSGKSITFVTQYDVENFLAIEKQLNKKIDKFTDLDEN-DVLLY 531
>UNIPROTKB|Q8EE19 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 119/329 (36%), Positives = 187/329 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ--TEPN--PGQVTALVLCHTRELA 56
+Q + IP + G +V+ A++G GKTA FVL L + P P +V +++L TRELA
Sbjct: 27 IQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLLHRFADAPKIRPKRVRSIILTPTRELA 86
Query: 57 YQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLS 116
Q+ +++ YLP +A+ YGGV+ K L E ++V TPGR+L + + +
Sbjct: 87 LQVEQNINQYAKYLPLTAMAM-YGGVDAAPQKKRLI-EGVDLLVATPGRLLDMYTQRAIR 144
Query: 117 LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDP 176
V +LDE D+ML+ + D+ I + P +Q ++FSATLSK+++ + K + D
Sbjct: 145 FDEVSVLVLDEADRMLD-MGFIEDINNIIEKLPEQRQNLLFSATLSKQVKALAKTAIPDA 203
Query: 177 MEIYVDDEAKLTLHGLVQHYIKLSELEKNRK---LNDLLDALDFNQVVIFVKSVSRAAEL 233
+EI + + + + + L+ ++K+RK L+ L+ ++ Q +IF+++ AA+L
Sbjct: 204 IEIEISRKNAASTQ--IDQW--LTTVDKDRKSALLSHLIKENNWAQALIFIQTKHGAAKL 259
Query: 234 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 293
L + + HSG SQ R FK G LVAT +V RGIDI+ + VINYD
Sbjct: 260 VSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGKVPFLVATGVVSRGIDIDALERVINYD 319
Query: 294 MPDSADTYLHRVGRAGRFGTKGLAITFVS 322
+PD AD Y+HR+GR GR G +G AI+FVS
Sbjct: 320 LPDEADDYIHRIGRTGRAGNQGEAISFVS 348
>TIGR_CMR|SO_2571 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 119/329 (36%), Positives = 187/329 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ--TEPN--PGQVTALVLCHTRELA 56
+Q + IP + G +V+ A++G GKTA FVL L + P P +V +++L TRELA
Sbjct: 27 IQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLLHRFADAPKIRPKRVRSIILTPTRELA 86
Query: 57 YQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLS 116
Q+ +++ YLP +A+ YGGV+ K L E ++V TPGR+L + + +
Sbjct: 87 LQVEQNINQYAKYLPLTAMAM-YGGVDAAPQKKRLI-EGVDLLVATPGRLLDMYTQRAIR 144
Query: 117 LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDP 176
V +LDE D+ML+ + D+ I + P +Q ++FSATLSK+++ + K + D
Sbjct: 145 FDEVSVLVLDEADRMLD-MGFIEDINNIIEKLPEQRQNLLFSATLSKQVKALAKTAIPDA 203
Query: 177 MEIYVDDEAKLTLHGLVQHYIKLSELEKNRK---LNDLLDALDFNQVVIFVKSVSRAAEL 233
+EI + + + + + L+ ++K+RK L+ L+ ++ Q +IF+++ AA+L
Sbjct: 204 IEIEISRKNAASTQ--IDQW--LTTVDKDRKSALLSHLIKENNWAQALIFIQTKHGAAKL 259
Query: 234 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 293
L + + HSG SQ R FK G LVAT +V RGIDI+ + VINYD
Sbjct: 260 VSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGKVPFLVATGVVSRGIDIDALERVINYD 319
Query: 294 MPDSADTYLHRVGRAGRFGTKGLAITFVS 322
+PD AD Y+HR+GR GR G +G AI+FVS
Sbjct: 320 LPDEADDYIHRIGRTGRAGNQGEAISFVS 348
>POMBASE|SPAC30D11.03 [details] [associations]
symbol:ddx27 "ATP-dependent RNA helicase Ddx27/Drs1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC30D11.03 GO:GO:0005524 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000265456 KO:K13181 OrthoDB:EOG4B01XM PIR:S62561
RefSeq:NP_593214.1 ProteinModelPortal:Q09903 STRING:Q09903
EnsemblFungi:SPAC30D11.03.1 GeneID:2543155 KEGG:spo:SPAC30D11.03
NextBio:20804181 Uniprot:Q09903
Length = 754
Score = 487 (176.5 bits), Expect = 5.1e-46, P = 5.1e-46
Identities = 113/340 (33%), Positives = 190/340 (55%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA---LVLCHTRELAY 57
+Q + IP A+LG D++ A +G GKTA F++ L++ P +V L+LC TRELA
Sbjct: 285 IQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILERLLYRPKKVPTTRVLILCPTRELAM 344
Query: 58 QICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD-LS 116
Q CH DI V + GG+++K+ + L+ P IV+ TPGR + R+ +
Sbjct: 345 Q-CHSVATKIASFTDIMVCLCIGGLSLKLQEQELRKR-PDIVIATPGRFIDHMRNSQGFT 402
Query: 117 LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDP 176
++N+ ++DE D+MLE ++ EI + P +Q M+FSAT++ ++ + + + P
Sbjct: 403 VENIEIMVMDEADRMLED-GFADELNEIIQACPKSRQTMLFSATMTDKVDDLIRLSLNRP 461
Query: 177 MEIYVDDEAKLTLHGLVQHYIKLS---ELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 233
+ ++VD++ K T L Q ++++ EL + L L L + +IF +S + A ++
Sbjct: 462 VRVFVDNK-KTTAKLLTQEFVRVRPQRELLRPAMLIYLCKELFHRRTIIFFRSKAFAHKM 520
Query: 234 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 293
+ + + IH +SQE+R+ + F++G L+ATD+ RGIDI+ + +VINY+
Sbjct: 521 RVIFGLLSLNATEIHGSLSQEQRVRALEDFRDGKCNYLLATDVASRGIDIKGIEVVINYE 580
Query: 294 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQV 333
P + + YLHRVGR R G G AIT ++ D +L V
Sbjct: 581 APATHEVYLHRVGRTARAGRSGRAIT-LAGEGDRKVLKGV 619
>MGI|MGI:2136689 [details] [associations]
symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 49"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2136689 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 HOVERGEN:HBG100512 CTD:54555
OrthoDB:EOG4C87SC EMBL:BC099554 IPI:IPI00354271
RefSeq:NP_001020093.2 UniGene:Mm.388127 UniGene:Mm.440659
ProteinModelPortal:Q4FZF3 SMR:Q4FZF3 PhosphoSite:Q4FZF3
PRIDE:Q4FZF3 Ensembl:ENSMUST00000008004 GeneID:234374
KEGG:mmu:234374 UCSC:uc009lzu.1 InParanoid:Q4FZF3 NextBio:382139
Bgee:Q4FZF3 CleanEx:MM_DDX49 Genevestigator:Q4FZF3
GermOnline:ENSMUSG00000057788 Uniprot:Q4FZF3
Length = 480
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 118/352 (33%), Positives = 191/352 (54%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q CIP + G D + AK+G GKTA FVL LQ+ +P + LVL TRELAYQI
Sbjct: 28 VQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDPYGIFCLVLTPTRELAYQIA 87
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD-LSLKN 119
+F L +K + GG+++ + + L + P +V+ TPGR+ R + ++K
Sbjct: 88 EQFRVLGKPL-GLKDCIIVGGMDM-VAQALELSRKPHVVIATPGRLADHLRSSNTFNMKK 145
Query: 120 VRHFILDECDKMLES--LDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 177
++ ++DE D++LE D D++ I P +Q ++FSATL+ ++ + +P
Sbjct: 146 IQFLVMDEADRLLEQGCTDFTTDLETILAAVPARRQTLLFSATLTDTLKELQGLATNEPF 205
Query: 178 EIYVDDEAKL-TLHGLVQHYIKLSELEKNRKLNDLL----DALDFNQVVIFVKSVSRAAE 232
+ + +A + T+ L Q Y+ + E K+ L L+ D L+ ++IF +
Sbjct: 206 --FWEAQATVRTVEQLDQRYLLVPEKVKDAYLVHLVQTFQDQLEDCSIIIFTNTCKTCQI 263
Query: 233 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 292
L +L + NFP++ +HS M Q+ER FK RIL+ATD+ RG+DI V +VIN+
Sbjct: 264 LCMMLRKFNFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINH 323
Query: 293 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKEL 344
+ P Y+HRVGR R G +G AIT V+ D +L+ ++ + + + EL
Sbjct: 324 NTPGLPKIYIHRVGRTARAGRQGQAITLVTQY-DIHLLHAIEEQIKQQLAEL 374
>DICTYBASE|DDB_G0270396 [details] [associations]
symbol:ddx49 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0270396 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14778 OMA:FRNLCAI
RefSeq:XP_646762.1 HSSP:P60842 ProteinModelPortal:Q55BR9
PRIDE:Q55BR9 EnsemblProtists:DDB0234206 GeneID:8617735
KEGG:ddi:DDB_G0270396 ProtClustDB:CLSZ2846935 Uniprot:Q55BR9
Length = 508
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 111/325 (34%), Positives = 183/325 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q IP+ + G D+I AK+G GKTA F + L Q +P V A++L TRELA QI
Sbjct: 30 IQANTIPEILKGRDIIASAKTGSGKTASFAIPILNQLSEDPYGVFAVILTPTRELAVQIG 89
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSLKN 119
+F + ++ +V GG++ + + L+ ++ P I+V TPGR+ + L ++LK
Sbjct: 90 EQFNAIGAPM-NVNCSVVIGGID-NVTQALILDKRPHIIVATPGRLASHLNNGLKIALKF 147
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFK-MTPHDK-QVMMFSATLSKEIRPVCKKFMQDPM 177
+ +LDE D++L D ++ I + + P +K Q ++FSAT++K + + + P
Sbjct: 148 CKFLVLDEADRLLGE-DFELEIASILEHLPPPEKRQTLLFSATMTKNLTKLDSIALNKPF 206
Query: 178 EIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL 237
I+ D+ T+ L Q YI + K+ L +L + + ++FV + + +L
Sbjct: 207 -IFEDNSKYDTVDTLKQEYIYMPAPTKDCYLVYILKKHEGSSAIVFVNNCYAVEAVKGML 265
Query: 238 VECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 297
+ + PS+ +HS + Q+ RL K FK G ++LVATD+ RG+DI V IVINY + +S
Sbjct: 266 NKLDIPSVSLHSFLDQKSRLAALKTFKSGKVKVLVATDVASRGLDIPDVQIVINYKLSNS 325
Query: 298 ADTYLHRVGRAGRFGTKGLAITFVS 322
+ Y+HRVGR RFG G AI+F++
Sbjct: 326 SKDYIHRVGRTARFGRSGRAISFIT 350
>TIGR_CMR|CPS_3401 [details] [associations]
symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
OMA:HLIKEHQ ProtClustDB:CLSK907013
BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
Length = 432
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 116/359 (32%), Positives = 189/359 (52%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ--------TEPNPGQ-VTALVLCH 51
+Q IP G D+I A +G GKTA F L LQ+ ++ + G VT LVL
Sbjct: 34 IQARAIPSVFAGRDLIAGANTGSGKTATFALPMLQKLREDISSGSKNSKGNFVTGLVLVP 93
Query: 52 TRELAYQICHEFERFSTYLP-DIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALA 110
TRELA Q+ + ++ + +IK +GGV++ I L+ I+V TPGR+L L
Sbjct: 94 TRELAKQVADSIKSYAVHFNGEIKTLAVFGGVSVNIQMLALRGGV-DILVATPGRLLDLI 152
Query: 111 RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCK 170
+ L V+ +LDE D+ML SL ++ + +TP KQ ++FSAT +++ + +
Sbjct: 153 SSNAIKLDKVKTLVLDEADRML-SLGFTEELTALLALTPKKKQTLLFSATFPEQVTTLTQ 211
Query: 171 KFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRA 230
+ + +P+EI + TL VQ +++ EK L L+ + Q +IFV +
Sbjct: 212 ELLNNPIEIQLQSADASTL---VQRVFTVNKGEKTAVLAHLIQQEQWRQALIFVNAKHHC 268
Query: 231 AELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVI 290
L + L + + H Q ER GFK G+ +L+ATD+ RG+DIE++ +VI
Sbjct: 269 EHLAEKLAKRGITAAVFHGDKGQSERSRVLDGFKAGDIEVLIATDIAARGLDIEKLPVVI 328
Query: 291 NYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQID 349
N+++P S Y+HR+GR+GR G GLAI+ + D + ++ + + +K EQ++
Sbjct: 329 NFNLPRSPSDYMHRIGRSGRAGEVGLAISLIDH-EDYHHFSVIEKKNKFRLKR--EQVE 384
>CGD|CAL0000056 [details] [associations]
symbol:orf19.7546 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14777 EMBL:AR550432 RefSeq:XP_719308.1
ProteinModelPortal:Q5ACU6 SMR:Q5ACU6 STRING:Q5ACU6 GeneID:3639008
KEGG:cal:CaO19.7546 Uniprot:Q5ACU6
Length = 539
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 113/349 (32%), Positives = 196/349 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ G D+I A++G GKTA F + LQ ALVL TREL +QI
Sbjct: 149 IQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWHAQQPYFALVLAPTRELTFQIK 208
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIH-KDLLKNECPQIVVGTPGRILA-LARDKDLSLK 118
F+ + + ++ + GG+++ +DL++ P ++V TPGRI+ L K SLK
Sbjct: 209 DTFDALGSSM-GLRSSCIVGGMDMMDQARDLMRK--PHVIVATPGRIMDHLEHTKGFSLK 265
Query: 119 NVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPME 178
N+++ ++DE D++L+ +D + +I K+ P + +FSAT++ +I + + + +P+
Sbjct: 266 NLKYLVMDEADRLLD-MDFGPALDKILKVIPIKRTTYLFSATMTNKIEKLQRASLHNPVR 324
Query: 179 IYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
+ V + + T LVQ + +++ KN L LL+ +++F ++V+ A L
Sbjct: 325 VAVSSKYQ-TADNLVQSMMLVNDGYKNTILIHLLNEFMGKSIIVFTRTVAHAQRTALLAR 383
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
F ++ +H +SQ +RL FK ILVATD+ RG+DI V++VINYD+P +
Sbjct: 384 ILGFNAVPLHGQLSQSQRLGSLNKFKSNQANILVATDVAARGLDIPSVDVVINYDIPTDS 443
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ 347
Y+HRVGR R G G +I+ ++ D ++ ++++ V K+LP++
Sbjct: 444 KAYIHRVGRTARAGRSGKSISLITQY-DLEMYLRIES---VLGKKLPKE 488
>UNIPROTKB|E2RBM7 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
OMA:EVRTVEQ GeneTree:ENSGT00670000098028 CTD:54555
EMBL:AAEX03012274 RefSeq:XP_541930.1 ProteinModelPortal:E2RBM7
Ensembl:ENSCAFT00000023054 GeneID:484814 KEGG:cfa:484814
NextBio:20858886 Uniprot:E2RBM7
Length = 488
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 118/352 (33%), Positives = 191/352 (54%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q CIP + G D + AK+G GKTA FVL LQ+ +P + LVL TRELAYQI
Sbjct: 28 VQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDPYGIFCLVLTPTRELAYQIA 87
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD-LSLKN 119
+F L +K + GG+++ + + L + P +V+ TPGR+ R + S+K
Sbjct: 88 EQFRVLGKPL-GLKDCIIVGGMDM-VAQALELSRKPHVVIATPGRLADHLRSSNTFSIKK 145
Query: 120 VRHFILDECDKMLES--LDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 177
+R ++DE D++LE D D++ I P +Q ++FSATL+ ++ + P
Sbjct: 146 IRFLVMDEADRLLEQGCTDFTVDLEAILAAVPTRRQTLLFSATLTDTLKELQGLATNQPF 205
Query: 178 EIYVDDEAKL-TLHGLVQHYIKLSELEKNRKLNDLLDAL-DFNQ---VVIFVKSVSRAAE 232
+ + +A + T+ L Q Y+ + E K+ L L+ D ++ ++IF +
Sbjct: 206 --FWEAQAPVRTVEQLDQRYLLVPEKVKDAYLVHLIQNFQDEHEDWSIIIFTNTCKTCQI 263
Query: 233 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 292
L +L + NFP++ +HS M Q+ER FK RIL+ATD+ RG+DI V +VIN+
Sbjct: 264 LCMMLRKFNFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINH 323
Query: 293 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKEL 344
+ P Y+HRVGR R G +G AIT V+ D +++ ++ + + ++EL
Sbjct: 324 NTPGLPKIYIHRVGRTARAGRQGQAITLVTQY-DIHLVHAIEEQIKKQLEEL 374
>UNIPROTKB|F1S7D9 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K14778 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 CTD:54555 EMBL:CU640483
RefSeq:XP_003123587.1 UniGene:Ssc.79767 Ensembl:ENSSSCT00000025399
GeneID:100526038 KEGG:ssc:100526038 Uniprot:F1S7D9
Length = 483
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 118/351 (33%), Positives = 190/351 (54%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q CIP + G D + AK+G GKTA FVL LQ+ +P + LVL TRELAYQI
Sbjct: 28 VQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDPYGIFCLVLTPTRELAYQIA 87
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD-LSLKN 119
+F L +K + GG+++ + + L + P +V+ TPGR+ R + S+K
Sbjct: 88 EQFRVLGKPL-GLKDCIIVGGMDM-VAQALELSRKPHVVIATPGRLADHLRSSNTFSIKK 145
Query: 120 VRHFILDECDKMLES--LDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 177
+R ++DE D++LE D D++ I P +Q ++FSATL+ +R + P
Sbjct: 146 IRFLVMDEADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRELQSLATNQPF 205
Query: 178 EIYVDDEAKL-TLHGLVQHYIKLSELEKNRKLNDLLDAL-DFNQ---VVIFVKSVSRAAE 232
+ + +A + T+ L Q Y+ + E K+ L L+ D ++ ++IF +
Sbjct: 206 --FWEAQAPVRTVEQLDQRYLLVPEKVKDAYLVHLIQNFQDEHEDWSIIIFTNTCKTCQI 263
Query: 233 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 292
L +L + NFP++ +HS M Q+ER FK RIL+ATD+ RG+DI V +VIN+
Sbjct: 264 LCMMLRKFNFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINH 323
Query: 293 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKE 343
+ P Y+HRVGR R G +G AIT V+ D +++ ++ + + ++E
Sbjct: 324 NTPGLPKIYIHRVGRTARAGRQGQAITLVTQY-DIHLVHAIEEQIKKKLEE 373
>TIGR_CMR|CPS_4097 [details] [associations]
symbol:CPS_4097 "ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008186
"RNA-dependent ATPase activity" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000083 GenomeReviews:CP000083_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K05590
ProtClustDB:PRK11192 RefSeq:YP_270752.2 ProteinModelPortal:Q47WS0
STRING:Q47WS0 PRIDE:Q47WS0 GeneID:3520098 KEGG:cps:CPS_4097
PATRIC:21471063 OMA:YLDKGHF BioCyc:CPSY167879:GI48-4110-MONOMER
Uniprot:Q47WS0
Length = 430
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 117/343 (34%), Positives = 184/343 (53%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQT----EPNPGQVTALVLCHTRELA 56
+Q IPQA++G DV+ A +G GKTA F+L Q PG L+L TRELA
Sbjct: 39 IQELVIPQAMVGKDVLASAPTGTGKTAAFLLPIAQHLLDYPRTKPGFPRVLILTPTRELA 98
Query: 57 YQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLS 116
QI + E+ T L IK V GGVN H D+L + I+V TPGR+L ++
Sbjct: 99 IQIGEDSEQL-TELTKIKTGVITGGVNYGSHADILTSTT-DILVATPGRLLEYIENEQFD 156
Query: 117 LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL-SKEIRPVCKKFMQD 175
+ + +LDE D+ML+ L + I KQ M+FSATL S ++ ++ + +
Sbjct: 157 AREIEILVLDEADRMLD-LGFSETINRIVAEARWRKQTMLFSATLESPGVQLFAEEVLNE 215
Query: 176 PMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALD---FNQVVIFVKSVSRAAE 232
P ++++ + ++ ++ L++ + N KLN L++ L + V+F
Sbjct: 216 P--VFLESKPSRKEKAVIHQWLHLAD-DANHKLNLLVNTLKQEGVERTVVFANKRETVQY 272
Query: 233 LN-KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVIN 291
L+ KL E P + + M Q++R + FK+G ++LVATD+ RG+DI+ ++ VIN
Sbjct: 273 LSGKLYAE-ELPCVWLEGKMPQDKRNKAIERFKKGEVKVLVATDVAARGLDIDDISHVIN 331
Query: 292 YDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQ 334
+DMP D Y+HR+GR GR G KG AI+ V A D ++ +++
Sbjct: 332 FDMPRKVDIYIHRIGRTGRAGKKGTAISLVE-AHDMGVIGKIE 373
>UNIPROTKB|E2R4Y9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:AAEX03005031
Ensembl:ENSCAFT00000017696 Uniprot:E2R4Y9
Length = 623
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 114/357 (31%), Positives = 195/357 (54%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + IP +LG DV+ A +G GKTA F+L + + +AL+L TRELA QI
Sbjct: 230 IQMQMIPVGLLGRDVLASADTGSGKTAAFLLPVITRALCESKTPSALILTPTRELAIQIE 289
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
++ + + LP +K + GG+ + L+ ++++ TPGR+L + + + L +
Sbjct: 290 NQAKELMSGLPRMKTVLLVGGLPLPPQLYRLRQHV-KVIIATPGRLLDIIKQSSVELCGI 348
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ ++DE D ML+ + ++ V +I + P+D Q ++ SAT+ I + + + +P+ I
Sbjct: 349 KIVVVDEADTMLK-MGFQQQVLDILEHVPNDSQTILVSATIPTSIEQLASQLLHNPVRI- 406
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLL-DALDFNQ-VVIFVKSVSRAAELNKLLV 238
+ E L + Q + + E K +KL ++L D F V++FV A L++ +
Sbjct: 407 ITGEKNLPCSSVRQIILWVEEPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLLSEAVQ 466
Query: 239 ECN-FPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 297
+ S+ IHS SQ ER KG EG+ ++V+T ++GRG+D+ V +V+N+DMP S
Sbjct: 467 KITGLKSVSIHSEKSQTERKNILKGLLEGDYEVVVSTGVLGRGLDLISVRLVVNFDMPSS 526
Query: 298 ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
D Y+H+VGR GR G G AITF+++ S + + R + LP Q+ S Y+
Sbjct: 527 MDEYVHQVGRVGRLGQNGTAITFINNNSKR-LFWDIAKRVKPTGSILPPQLLNSPYL 582
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 121/329 (36%), Positives = 178/329 (54%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP----GQVTALVLCHTRELA 56
+Q + IP + G DV+ A++G GKTA F L L+ P QV AL+L TRELA
Sbjct: 27 IQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILELLAKGPKVRANQVRALILTPTRELA 86
Query: 57 YQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP--QIVVGTPGRILALARDKD 114
QI + +LP +K AV +GGV KI+ + + C I+V TPGR++ L
Sbjct: 87 AQIQDNVMLYGRHLP-LKSAVVFGGV--KINPQM-QRMCKGADILVATPGRLMDLYNQNA 142
Query: 115 LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQ 174
+ + +LDE D+ML+ + RD+ +I K+ P +Q ++FSAT S EIR + K +
Sbjct: 143 VKFDQLEILVLDEADRMLD-MGFIRDIHKILKLLPEKRQNLLFSATFSTEIRELAKGLVN 201
Query: 175 DPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELN 234
+P+EI V A T + Q +K L L+ ++ QV++F+++ A L
Sbjct: 202 NPVEISVSP-ANSTARTVEQCIYPADVKKKPDMLVKLVKEGNWQQVLVFMRTKHGANRLA 260
Query: 235 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 294
L E + IH SQ R FK G RILVATD+ RGIDI ++ V+N+++
Sbjct: 261 TYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATDIAARGIDIPQLPQVVNFEL 320
Query: 295 PDSADTYLHRVGRAGRFGTKGLAITFVSS 323
P A+ Y+HR+GR GR G G AI+ VS+
Sbjct: 321 PKIAEDYVHRIGRTGRAGEVGKAISLVSA 349
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 118/357 (33%), Positives = 195/357 (54%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPN---PGQ------VTALVLCH 51
+Q + IP + G D+I A++G GKTA FVL L+Q G+ + AL+L
Sbjct: 27 IQQKAIPVVLAGKDIIAAAQTGTGKTASFVLPLLEQLNSQYKETGKKLRAKRIRALILVP 86
Query: 52 TRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALAR 111
TRELA Q+ +++ YL DI YGGV+ + K L I+V TPGR+L +
Sbjct: 87 TRELAVQVEASISQYAKYL-DISSMAMYGGVDAQEQKQRLIWGV-DILVATPGRLLDMTH 144
Query: 112 DKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKK 171
+ L + +LDE D+ML+ + D+ +I + P +Q ++FSAT+S+E+R + K+
Sbjct: 145 QRVLHFDELDMLVLDEADRMLD-MGFIDDINKIIERLPEHRQNLLFSATMSEEVRGLAKR 203
Query: 172 FMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAA 231
+ P+EI + + K + + Q + + + K+ L+ ++ ++ Q +IF+++ AA
Sbjct: 204 TIHKPVEISIGAD-KASKPKIEQWLVTVDKANKSALLSHIITTQNWQQALIFIETKHGAA 262
Query: 232 ELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVIN 291
+L L + + IHSG +Q+ R FK G + LVAT + RG+DI ++ VIN
Sbjct: 263 KLVSQLEKRGIVAESIHSGRAQDIREKILNDFKSGKIKFLVATAIAARGLDIGELSRVIN 322
Query: 292 YDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFE--VDIKELPE 346
YD+P D Y+HR+GR GR G G AI+ VS + ++ +++R ++ KE E
Sbjct: 323 YDLPAQVDDYIHRIGRTGRAGASGEAISLVSKDNFRELC-AIESRLGHIIERKEFEE 378
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 121/329 (36%), Positives = 178/329 (54%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP----GQVTALVLCHTRELA 56
+Q + IP + G DV+ A++G GKTA F L L+ P QV AL+L TRELA
Sbjct: 27 IQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILELLAKGPKVRANQVRALILTPTRELA 86
Query: 57 YQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP--QIVVGTPGRILALARDKD 114
QI + +LP +K AV +GGV KI+ + + C I+V TPGR++ L
Sbjct: 87 AQIQDNVMLYGRHLP-LKSAVVFGGV--KINPQM-QRMCKGADILVATPGRLMDLYNQNA 142
Query: 115 LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQ 174
+ + +LDE D+ML+ + RD+ +I K+ P +Q ++FSAT S EIR + K +
Sbjct: 143 VKFDQLEILVLDEADRMLD-MGFIRDIHKILKLLPEKRQNLLFSATFSTEIRELAKGLVN 201
Query: 175 DPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELN 234
+P+EI V A T + Q +K L L+ ++ QV++F+++ A L
Sbjct: 202 NPVEISVSP-ANSTARTVEQCIYPADVKKKPDMLVKLVKEGNWQQVLVFMRTKHGANRLA 260
Query: 235 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 294
L E + IH SQ R FK G RILVATD+ RGIDI ++ V+N+++
Sbjct: 261 TYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATDIAARGIDIPQLPQVVNFEL 320
Query: 295 PDSADTYLHRVGRAGRFGTKGLAITFVSS 323
P A+ Y+HR+GR GR G G AI+ VS+
Sbjct: 321 PKIAEDYVHRIGRTGRAGEVGKAISLVSA 349
>UNIPROTKB|O05855 [details] [associations]
symbol:rhlE "PROBABLE ATP-DEPENDENT RNA HELICASE RHLE"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005618
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0003676
EMBL:BX842582 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
HOGENOM:HOG000268807 EMBL:CP003248 PIR:D70595 RefSeq:NP_217727.1
RefSeq:NP_337835.1 RefSeq:YP_006516683.1 SMR:O05855
EnsemblBacteria:EBMYCT00000003215 EnsemblBacteria:EBMYCT00000071518
GeneID:13318029 GeneID:888840 GeneID:923099 KEGG:mtc:MT3307
KEGG:mtu:Rv3211 KEGG:mtv:RVBD_3211 PATRIC:18129030
TubercuList:Rv3211 OMA:RWQLIDK ProtClustDB:CLSK792349
Uniprot:O05855
Length = 527
Score = 384 (140.2 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 99/299 (33%), Positives = 147/299 (49%)
Query: 37 TEPNPGQVTALVLCHTRELAYQICHEFERFSTYL---PD----------IKVAVFYGGVN 83
T P G ALV+ TREL Q+ + YL PD + V YGG
Sbjct: 78 TRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDAAAVRRRLSVVSIYGGRP 137
Query: 84 IKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQE 143
+ + L+ +VVGTPGR+L L + L L + +LDE D+ML+ L D++
Sbjct: 138 YEPQIEALRAGA-DVVVGTPGRLLDLCQQGHLQLGGLSVLVLDEADEMLD-LGFLPDIER 195
Query: 144 IFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYI-KLSEL 202
I + P D+Q M+FSAT+ I + + FM P I + +H + ++ + L
Sbjct: 196 ILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSAVHDATEQFVYRAHAL 255
Query: 203 EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKG 262
+K ++ +L A D +IF ++ A ++ L E F +H + Q R K
Sbjct: 256 DKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAVHGDLGQLAREKALKA 315
Query: 263 FKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFV 321
F+ G +LVATD+ RGIDI+ V VINY P+ Y+HR+GR GR G G+A+T V
Sbjct: 316 FRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGRTGRAGRTGVAVTLV 374
Score = 108 (43.1 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 30/76 (39%), Positives = 40/76 (52%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ------TEPNPGQVTALVLCHTRE 54
+Q +P A+ G DVI QA++GMGKT F + LQ+ T P G ALV+ TRE
Sbjct: 36 IQELTLPLALDGEDVIGQARTGMGKTFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRE 95
Query: 55 LAYQICHEFERFSTYL 70
L Q+ + YL
Sbjct: 96 LCLQVTDDLATAGKYL 111
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 111/329 (33%), Positives = 179/329 (54%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ-------QTEPNPGQVTALVLCHTR 53
+Q + IP + G DV+ A++G GKTA F L +Q Q E N ++ ALVL TR
Sbjct: 32 IQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQRFIEQPWQREANSKEIRALVLVPTR 91
Query: 54 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 113
ELA Q+ + ++ ++K+ YGG ++K+ + L+ I++ TPGR+L A K
Sbjct: 92 ELAQQVLDSLQAYAKGT-ELKIVAVYGGTSMKVQLNHLRGGV-DILIATPGRLLDHAHVK 149
Query: 114 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 173
L L V +LDE D+ML+ + D+Q + + +Q + FSAT +I+ V + M
Sbjct: 150 SLFLGKVEVLVLDEADRMLD-MGFMPDLQRVLRRLSPLRQTLFFSATFDSKIKAVAYRIM 208
Query: 174 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 233
+DP+E+ V + T + Q + + K L+ L+ + ++ QV++F K+ + L
Sbjct: 209 RDPIEVQVTP-SNSTAETVQQMVYPVDKKRKRELLSYLIGSKNWQQVLVFTKTRQGSDAL 267
Query: 234 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 293
+ L ++ I+ SQ R FK G R L+ATD+ RG+DI ++ V+NYD
Sbjct: 268 AEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAARGLDIAQLEQVVNYD 327
Query: 294 MPDSADTYLHRVGRAGRFGTKGLAITFVS 322
MP A+ Y+HR+GR GR G GLA++ +S
Sbjct: 328 MPFKAEDYVHRIGRTGRAGLAGLAVSLLS 356
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 111/329 (33%), Positives = 179/329 (54%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ-------QTEPNPGQVTALVLCHTR 53
+Q + IP + G DV+ A++G GKTA F L +Q Q E N ++ ALVL TR
Sbjct: 32 IQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQRFIEQPWQREANSKEIRALVLVPTR 91
Query: 54 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK 113
ELA Q+ + ++ ++K+ YGG ++K+ + L+ I++ TPGR+L A K
Sbjct: 92 ELAQQVLDSLQAYAKGT-ELKIVAVYGGTSMKVQLNHLRGGV-DILIATPGRLLDHAHVK 149
Query: 114 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 173
L L V +LDE D+ML+ + D+Q + + +Q + FSAT +I+ V + M
Sbjct: 150 SLFLGKVEVLVLDEADRMLD-MGFMPDLQRVLRRLSPLRQTLFFSATFDSKIKAVAYRIM 208
Query: 174 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL 233
+DP+E+ V + T + Q + + K L+ L+ + ++ QV++F K+ + L
Sbjct: 209 RDPIEVQVTP-SNSTAETVQQMVYPVDKKRKRELLSYLIGSKNWQQVLVFTKTRQGSDAL 267
Query: 234 NKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 293
+ L ++ I+ SQ R FK G R L+ATD+ RG+DI ++ V+NYD
Sbjct: 268 AEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAARGLDIAQLEQVVNYD 327
Query: 294 MPDSADTYLHRVGRAGRFGTKGLAITFVS 322
MP A+ Y+HR+GR GR G GLA++ +S
Sbjct: 328 MPFKAEDYVHRIGRTGRAGLAGLAVSLLS 356
>UNIPROTKB|G3X7G8 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:DAAA02043967 EMBL:DAAA02043968
RefSeq:NP_001179318.1 UniGene:Bt.41740 Ensembl:ENSBTAT00000027398
GeneID:514901 KEGG:bta:514901 NextBio:20871562 Uniprot:G3X7G8
Length = 620
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 112/357 (31%), Positives = 195/357 (54%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + IP +LG DV+ A +G GKTA F+L + + + LVL TRELA QI
Sbjct: 230 IQMQMIPVGLLGRDVLASADTGSGKTAAFLLPVILRALSQSKSPSGLVLTPTRELAIQIE 289
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
+ + + LP ++ A+ GG+ + L+ Q+++ TPGR+L + + + + L ++
Sbjct: 290 RQAKELMSGLPCLRTALLVGGLPAPPQRHRLRQRI-QVIIATPGRLLDIIKQRSVELGSI 348
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ ++DE D ML+ + ++ V ++ + PHD Q ++ SAT+ + + + ++DP+ I
Sbjct: 349 KIVVVDEADTMLK-MGFQQQVLDVLEQLPHDCQTVLASATIPASVEQLACQLLRDPVAIT 407
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLL-DALDFNQ-VVIFVKSVSRAAELNKLLV 238
E L + Q + + E K +KL ++L D F V++FV A L++ +
Sbjct: 408 AG-ERNLPCPSVRQIVLWVEEPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLLSEAVQ 466
Query: 239 ECN-FPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 297
+ S +HS +Q ER KG EG+ ++V+T ++GRG+D+ V +V+N+DMP S
Sbjct: 467 KITGLKSTSVHSDKTQMERKNILKGLLEGDYDVVVSTGVLGRGLDLVGVKLVVNFDMPSS 526
Query: 298 ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
D Y+H++GR GR G G AITF+++ S + + R + LP Q+ S Y+
Sbjct: 527 MDEYVHQIGRVGRLGQHGTAITFINNNSKR-LFWDIAKRVKPTGSLLPPQLLNSPYL 582
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 117/353 (33%), Positives = 189/353 (53%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ------QTEPNPGQVTALVLCHTRE 54
+Q E IP + DV+ A++G GKTA F L LQ Q++ + ALVL TRE
Sbjct: 27 IQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQLLMADNQSDHAAKAIRALVLVPTRE 86
Query: 55 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD 114
LA Q+ F +++ DI+V + YGGV+I+ + + N +++ TPGR+L R
Sbjct: 87 LALQVQQSFVKYAKGT-DIRVGIAYGGVSIEAQQAVF-NAGIDVLIATPGRLLDHLRQGA 144
Query: 115 LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQ 174
L+L + + DE D+ML+ + ++Q + K P +Q ++FSATL I K ++
Sbjct: 145 LNLNQLNTLVFDEADRMLD-MGFMDEIQAVLKQVPAQRQTLLFSATLDDSIFSFSKNLLR 203
Query: 175 DPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELN 234
DP I V + T + Q + K ++ L+ + ++ QV+IF ++ +L
Sbjct: 204 DPKRIEVA-KPNTTAAQIEQRVYAIDSDRKTEFVSHLVRSKNWQQVLIFSRTKQGVDKLT 262
Query: 235 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 294
L + + H +SQ R + FK+G ++LVATD+ RG+DI + VIN+++
Sbjct: 263 AQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLVATDVAARGLDIAELQYVINFEL 322
Query: 295 PDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ 347
P A+ Y+HR+GR GR G+ GLAIT S D+ +L +V+ + K LP+Q
Sbjct: 323 PFIAEDYIHRIGRTGRAGSAGLAITLFSQ-EDALLLEEVETLLD---KRLPQQ 371
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 117/353 (33%), Positives = 189/353 (53%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ------QTEPNPGQVTALVLCHTRE 54
+Q E IP + DV+ A++G GKTA F L LQ Q++ + ALVL TRE
Sbjct: 27 IQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQLLMADNQSDHAAKAIRALVLVPTRE 86
Query: 55 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD 114
LA Q+ F +++ DI+V + YGGV+I+ + + N +++ TPGR+L R
Sbjct: 87 LALQVQQSFVKYAKGT-DIRVGIAYGGVSIEAQQAVF-NAGIDVLIATPGRLLDHLRQGA 144
Query: 115 LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQ 174
L+L + + DE D+ML+ + ++Q + K P +Q ++FSATL I K ++
Sbjct: 145 LNLNQLNTLVFDEADRMLD-MGFMDEIQAVLKQVPAQRQTLLFSATLDDSIFSFSKNLLR 203
Query: 175 DPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELN 234
DP I V + T + Q + K ++ L+ + ++ QV+IF ++ +L
Sbjct: 204 DPKRIEVA-KPNTTAAQIEQRVYAIDSDRKTEFVSHLVRSKNWQQVLIFSRTKQGVDKLT 262
Query: 235 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 294
L + + H +SQ R + FK+G ++LVATD+ RG+DI + VIN+++
Sbjct: 263 AQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLVATDVAARGLDIAELQYVINFEL 322
Query: 295 PDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ 347
P A+ Y+HR+GR GR G+ GLAIT S D+ +L +V+ + K LP+Q
Sbjct: 323 PFIAEDYIHRIGRTGRAGSAGLAITLFSQ-EDALLLEEVETLLD---KRLPQQ 371
>UNIPROTKB|Q9Y6V7 [details] [associations]
symbol:DDX49 "Probable ATP-dependent RNA helicase DDX49"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC002985 KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ
HOVERGEN:HBG100512 EMBL:AK223294 EMBL:BC002674 IPI:IPI00003739
RefSeq:NP_061943.2 UniGene:Hs.143187 ProteinModelPortal:Q9Y6V7
SMR:Q9Y6V7 IntAct:Q9Y6V7 STRING:Q9Y6V7 PhosphoSite:Q9Y6V7
DMDM:74753527 PaxDb:Q9Y6V7 PRIDE:Q9Y6V7 DNASU:54555
Ensembl:ENST00000247003 GeneID:54555 KEGG:hsa:54555 UCSC:uc002nkq.2
CTD:54555 GeneCards:GC19P019030 HGNC:HGNC:18684 neXtProt:NX_Q9Y6V7
PharmGKB:PA134956171 InParanoid:Q9Y6V7 OrthoDB:EOG4C87SC
PhylomeDB:Q9Y6V7 GenomeRNAi:54555 NextBio:57032 ArrayExpress:Q9Y6V7
Bgee:Q9Y6V7 CleanEx:HS_DDX49 Genevestigator:Q9Y6V7
GermOnline:ENSG00000105671 Uniprot:Q9Y6V7
Length = 483
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 117/351 (33%), Positives = 190/351 (54%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q CIP + G D + AK+G GKTA FVL LQ+ +P + LVL TRELAYQI
Sbjct: 28 VQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDPYGIFCLVLTPTRELAYQIA 87
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD-LSLKN 119
+F L +K + GG+++ + + L + P +V+ TPGR+ R + S+K
Sbjct: 88 EQFRVLGKPL-GLKDCIIVGGMDM-VAQALELSRKPHVVIATPGRLADHLRSSNTFSIKK 145
Query: 120 VRHFILDECDKMLES--LDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 177
+R ++DE D++LE D D++ I P +Q ++FSATL+ +R + P
Sbjct: 146 IRFLVMDEADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRELQGLATNQPF 205
Query: 178 EIYVDDEAKL-TLHGLVQHYIKLSELEKNRKLNDLLDAL-DFNQ---VVIFVKSVSRAAE 232
+ + +A + T+ L Q Y+ + E K+ L L+ D ++ ++IF +
Sbjct: 206 --FWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQI 263
Query: 233 LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINY 292
L +L + +FP++ +HS M Q+ER FK RIL+ATD+ RG+DI V +VIN+
Sbjct: 264 LCMMLRKFSFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINH 323
Query: 293 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKE 343
+ P Y+HRVGR R G +G AIT V+ D +++ ++ + + ++E
Sbjct: 324 NTPGLPKIYIHRVGRTARAGRQGQAITLVTQY-DIHLVHAIEEQIKKKLEE 373
>ZFIN|ZDB-GENE-050208-665 [details] [associations]
symbol:ddx59 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 59" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-050208-665 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:BX649292
IPI:IPI00786758 Ensembl:ENSDART00000105600 Bgee:F1R8P9
Uniprot:F1R8P9
Length = 584
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 117/361 (32%), Positives = 198/361 (54%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVF----VLSTLQQTEPNPGQVTALVLCHTRELA 56
+Q + +P + G DVI A +G GKT F V+ LQ +P L+L TRELA
Sbjct: 196 VQMQMVPVGLTGRDVIATADTGSGKTVAFLLPVVMRALQSESASPSCPACLILTPTRELA 255
Query: 57 YQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLS 116
QI + + LP+++ A+ GG+ + LK+ +IV+GTPGR+L + + K +
Sbjct: 256 IQIEEQAKELMRGLPNMRTALLVGGMPLPPQLHRLKHNI-KIVIGTPGRLLEILKQKAVQ 314
Query: 117 LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDP 176
L +VR ++DE D ML+ + ++ V +I + P D Q ++ SAT+ + + ++ DP
Sbjct: 315 LDHVRTVVVDEADTMLK-MGFQQQVLDILEQVPEDHQTLLTSATIPTGTQQLAERLTHDP 373
Query: 177 MEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQ--VVIFVKSVSRAAELN 234
+ I + + + + + Q + + E K +KL ++L+ Q VV+FV A L
Sbjct: 374 VTITIGQKNQPCAN-VRQIVLWVEEPSKKKKLFEILNDEKLYQPPVVVFVDCKLGADLLC 432
Query: 235 KLLVEC-NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYD 293
+ + + + ++ IHS Q ER KG EG ++++T ++GRG+D+ V +VIN+D
Sbjct: 433 EAVQKVMSLNTVAIHSDKMQWERNKIVKGLLEGQFDVVISTGILGRGLDLVNVKLVINFD 492
Query: 294 MPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTY 353
MP + D Y+H++GRAGR G +G AITF+++ + L V+ R + LP QI S +
Sbjct: 493 MPSNMDEYVHQIGRAGRLGHRGTAITFMNNNNKRLFLEMVK-RVKPTGSILPPQILNSPH 551
Query: 354 M 354
+
Sbjct: 552 L 552
>TIGR_CMR|CPS_1590 [details] [associations]
symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
OMA:AISECGY ProtClustDB:CLSK768209
BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
Length = 455
Score = 416 (151.5 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 103/328 (31%), Positives = 165/328 (50%)
Query: 13 MDVICQAKSGMGKTAVFVLSTLQQTEPNPGQ-VTALVLCHTRELAYQICHEFERFSTYLP 71
+D I +A + + + GQ + AL+L TRELA Q+ ++FS YLP
Sbjct: 60 LDAIAKANHAAKSSTTSTDENSAEEKSASGQAIRALILTPTRELANQVADNIKQFSQYLP 119
Query: 72 DIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKM 131
IK V YGG + +LK ++V TPGR+L +++ L V+ +LDE D+M
Sbjct: 120 -IKSGVVYGGGKMASQTKMLKQGL-DVLVATPGRLLEHLALRNVDLSQVKFLVLDEADRM 177
Query: 132 LESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 191
L+ + D++++ H Q +MFSAT S ++ + + ++ P I V E T G
Sbjct: 178 LD-MGFLTDIEKLLLAVKHKHQTLMFSATFSDRVKSLANQLLKSPKTISVSKEN--TTSG 234
Query: 192 LVQHYIK-LSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 250
++ + ++E K L++L+ ++ QV++F + A L K L + H
Sbjct: 235 KIKQAVYWVTEERKRELLSELIGVNNWQQVLVFAGTKESANTLAKELKLDGIKAALCHGD 294
Query: 251 MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 310
+Q R + F EG R+LVATD+ RG+DI + V+N+ +P + Y+HRVGR GR
Sbjct: 295 KTQGARNKALEQFSEGKVRVLVATDVAARGLDIPDLAFVVNFHLPFLPEDYVHRVGRTGR 354
Query: 311 FGTKGLAITFVSSASDSDILNQVQARFE 338
G G AI+ VS D L ++ E
Sbjct: 355 AGKSGTAISLVSP-KDERFLENIEQLIE 381
Score = 71 (30.1 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 34
+Q E IP G+D++ A++G GKTA F L L
Sbjct: 27 IQQEAIPVIRQGVDLLASAQTGTGKTAAFSLPIL 60
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 116/351 (33%), Positives = 189/351 (53%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP + G +++ QA +G GKTA ++L LQ+ + + L++ TRELA Q+
Sbjct: 28 IQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQRIQRGK-KAQVLIVTPTRELALQVA 86
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E + YL ++ YGG I+ L+ +++VGTPGRIL K +
Sbjct: 87 DEVAKLGKYLK-VRALAVYGGQAIERQIRGLRQGV-EVIVGTPGRILDHIGRKTFPAAEI 144
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ ILDE D+ML+ + D++ I + +Q ++FSATL I+ + KKF+ +
Sbjct: 145 KIVILDEADEMLD-MGFIDDIEAILNTLTNRQQTLLFSATLPAPIKTIIKKFLGGYKTVK 203
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
+ K T+ + Q Y +L E EK L +L++ Q ++F ++ R E+ + L
Sbjct: 204 LVGREK-TVPAIRQVYYELPETEKIEGLVSILNSELPIQAIVFCRTKKRVDEVVEQLNFR 262
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
+ + +H MSQ ER K FK G +LVATD+ RG+DI V+ VIN+D+P + ++
Sbjct: 263 GYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAARGLDIPDVSHVINFDIPQNPES 322
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKE--LPEQID 349
Y+HR+GR GR G +G AIT ++ + +L ++ +K LPE +D
Sbjct: 323 YIHRIGRTGRAGREGKAITLINYR-ERKLLKAIEEAINKRLKREILPEPVD 372
>UNIPROTKB|Q81JK1 [details] [associations]
symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 114/335 (34%), Positives = 177/335 (52%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ D++ ++++G GKTA F + + E + ALVL TRELA Q+
Sbjct: 30 VQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCEMVEWEENKPQALVLTPTRELAVQVK 89
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
+ + IK A YG K LK + IVVGTPGR+L LSL+ +
Sbjct: 90 EDITNIGRF-KRIKAAAIYGKSPFARQKLELKQKT-HIVVGTPGRVLDHIEKGTLSLERL 147
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
++ ++DE D+ML ++ V+ I P + M+FSATL +++ + + +M P I
Sbjct: 148 KYLVIDEADEML-NMGFIDQVEAIIDELPTKRMTMLFSATLPEDVERLSRTYMNAPTHIE 206
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
+ A +T + ++ E EK L D+ + + +IF ++ + + L
Sbjct: 207 IK-AAGITTDKIEHTLFEVREEEKLSLLKDVTTIENPDSCIIFCRTQENVDHVYRQLDRV 265
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
N+P IH GM QE+R F++G R LVATD+ RGIDI+ + VINYD+P ++
Sbjct: 266 NYPCDKIHGGMVQEDRFGVMDDFRKGKFRYLVATDVAARGIDIDNITHVINYDIPLEKES 325
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQA 335
Y+HR GR GR G G AITF++ D L +++A
Sbjct: 326 YVHRTGRTGRAGNSGKAITFITPYEDR-FLEEIEA 359
>TIGR_CMR|BA_5703 [details] [associations]
symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 114/335 (34%), Positives = 177/335 (52%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP A+ D++ ++++G GKTA F + + E + ALVL TRELA Q+
Sbjct: 30 VQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCEMVEWEENKPQALVLTPTRELAVQVK 89
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
+ + IK A YG K LK + IVVGTPGR+L LSL+ +
Sbjct: 90 EDITNIGRF-KRIKAAAIYGKSPFARQKLELKQKT-HIVVGTPGRVLDHIEKGTLSLERL 147
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
++ ++DE D+ML ++ V+ I P + M+FSATL +++ + + +M P I
Sbjct: 148 KYLVIDEADEML-NMGFIDQVEAIIDELPTKRMTMLFSATLPEDVERLSRTYMNAPTHIE 206
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
+ A +T + ++ E EK L D+ + + +IF ++ + + L
Sbjct: 207 IK-AAGITTDKIEHTLFEVREEEKLSLLKDVTTIENPDSCIIFCRTQENVDHVYRQLDRV 265
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
N+P IH GM QE+R F++G R LVATD+ RGIDI+ + VINYD+P ++
Sbjct: 266 NYPCDKIHGGMVQEDRFGVMDDFRKGKFRYLVATDVAARGIDIDNITHVINYDIPLEKES 325
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQA 335
Y+HR GR GR G G AITF++ D L +++A
Sbjct: 326 YVHRTGRTGRAGNSGKAITFITPYEDR-FLEEIEA 359
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 116/351 (33%), Positives = 189/351 (53%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q E IP + G +++ QA +G GKTA ++L LQ+ + + L++ TRELA Q+
Sbjct: 28 IQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQRIQRGK-KAQVLIVTPTRELALQVA 86
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E + YL ++ YGG I+ L+ +++VGTPGRIL K +
Sbjct: 87 DEVAKLGKYLK-VRALAVYGGQAIERQIRGLRQGV-EVIVGTPGRILDHIGRKTFPAAEI 144
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ ILDE D+ML+ + D++ I + +Q ++FSATL I+ + KKF+ +
Sbjct: 145 KIVILDEADEMLD-MGFIDDIEAILNTLTNRQQTLLFSATLPAPIKTIIKKFLGGYKTVK 203
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
+ K T+ + Q Y +L E EK L +L++ Q ++F ++ R E+ + L
Sbjct: 204 LVGREK-TVPAIRQVYYELPETEKIEGLVSILNSELPIQAIVFCRTKKRVDEVVEQLNFR 262
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
+ + +H MSQ ER K FK G +LVATD+ RG+DI V+ VIN+D+P + ++
Sbjct: 263 GYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAARGLDIPDVSHVINFDIPQNPES 322
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKE--LPEQID 349
Y+HR+GR GR G +G AIT ++ + +L ++ +K LPE +D
Sbjct: 323 YIHRIGRTGRAGREGKAITLINYR-ERKLLKAIEEAINKRLKREILPEPVD 372
>UNIPROTKB|I3LV06 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:FP312674 RefSeq:XP_003357711.1
Ensembl:ENSSSCT00000031167 GeneID:100621580 KEGG:ssc:100621580
Uniprot:I3LV06
Length = 607
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 114/357 (31%), Positives = 187/357 (52%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + IP +LG D++ A +G GKTA F+L + + +ALVL TRELA QI
Sbjct: 217 IQMQMIPVGLLGRDLLASADTGSGKTAAFLLPVITRALVQSKAPSALVLTPTRELAIQIE 276
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
+ + LP ++ A+ GG+ L+ Q+++ TPGR+L + + + L N+
Sbjct: 277 RQAKELMGGLPRMRTALLVGGLPAPPQLHRLRQRV-QVIIATPGRLLDIMKQSSVDLGNI 335
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ ++DE D ML+ + + V ++ + P D Q ++ SAT+ I + + + DP+ +
Sbjct: 336 KIVVVDEADTMLK-MGFQEQVLDVLENVPQDCQTILVSATIPTRIEQLASRLLHDPVRVL 394
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLL-DALDFNQVVIFVKSVSRAAELNKLLVE 239
E L + Q + + E K +KL ++L D F V+ A+L VE
Sbjct: 395 AG-EKNLPCPSVRQIVLWVEEPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLLSEAVE 453
Query: 240 --CNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 297
S +HS SQ ER T +G EG+ ++V+T ++GRG+D+ V +V+N+DMP S
Sbjct: 454 KITGLKSTSMHSEKSQIERKTILEGLLEGDYDVVVSTGVLGRGLDLISVKLVVNFDMPSS 513
Query: 298 ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
D Y+H+VGR GR G G AITF+++ S + + R + LP Q+ S Y+
Sbjct: 514 MDEYVHQVGRVGRLGQNGTAITFINNNSKR-LFWDIAKRVKPTGSLLPPQLLNSPYL 569
>MGI|MGI:1915247 [details] [associations]
symbol:Ddx59 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 59"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915247
GO:GO:0005524 GO:GO:0046872 GO:GO:0003723 GO:GO:0005622
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
GeneTree:ENSGT00610000086076 CTD:83479 HOGENOM:HOG000006599
HOVERGEN:HBG106120 OMA:VTRPIID EMBL:AK004833 EMBL:AK013179
EMBL:AK076462 EMBL:BC023840 IPI:IPI00119928 IPI:IPI00226119
RefSeq:NP_080776.1 UniGene:Mm.385462 UniGene:Mm.486546
ProteinModelPortal:Q9DBN9 SMR:Q9DBN9 PhosphoSite:Q9DBN9
PRIDE:Q9DBN9 Ensembl:ENSMUST00000027655 GeneID:67997 KEGG:mmu:67997
UCSC:uc007cut.1 UCSC:uc007cuu.2 InParanoid:Q9DBN9 OrthoDB:EOG4K9BBZ
ChiTaRS:DDX59 NextBio:326168 Bgee:Q9DBN9 CleanEx:MM_DDX59
Genevestigator:Q9DBN9 Uniprot:Q9DBN9
Length = 619
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 114/357 (31%), Positives = 194/357 (54%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + IP +LG D++ A +G GKTA F+L + + +AL+L TRELA QI
Sbjct: 229 IQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIIRAFSEDKTPSALILTPTRELAIQIE 288
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
+ + + LP +K + GG+ + L+ ++++ TPGR+L + + +SL +
Sbjct: 289 RQAKELMSGLPRMKTVLLVGGLPLPPQLYRLRQHV-KVIIATPGRLLDIIKQSSVSLSGI 347
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ ++DE D ML+ + ++ V ++ + TP D Q ++ SAT+ I + + + +P+ I
Sbjct: 348 KIVVVDEADTMLK-MGFQQQVLDVLEHTPGDCQTILVSATIPDSIEQLTDQLLHNPVRII 406
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLL-DALDFNQ-VVIFVKSVSRAAELNKLLV 238
D+ L + Q + + + K +KL ++L D F V++FV A L++ +
Sbjct: 407 TGDK-NLPCASVRQIILWVEDPAKKKKLFEILNDQKLFKPPVLVFVDCKLGADLLSEAVQ 465
Query: 239 ECN-FPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 297
+ S IHS SQ ER KG EG+ ++V+T ++GRG+D+ V +V+N+DMP S
Sbjct: 466 KITGLNSTSIHSEKSQVERRDILKGLLEGDYEVVVSTGVLGRGLDLVNVKLVVNFDMPSS 525
Query: 298 ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
D Y+H+VGR GR G G AITF+++ S + V R + LP Q+ S Y+
Sbjct: 526 MDEYVHQVGRVGRLGQNGTAITFINNNSKR-LFWDVAKRVKPTGSILPPQLLNSPYL 581
>UNIPROTKB|B4DRZ7 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
UniGene:Hs.656037 HGNC:HGNC:25628 EMBL:AC012184 EMBL:AK299504
IPI:IPI01009735 SMR:B4DRZ7 STRING:B4DRZ7 Ensembl:ENST00000443119
UCSC:uc002eys.3 Uniprot:B4DRZ7
Length = 388
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 127/359 (35%), Positives = 199/359 (55%)
Query: 1 MQHECIPQAILG--MDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQ 58
+Q +P + ++I Q++SG GKTA FVL+ L + EP+ L L T ELA Q
Sbjct: 27 IQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPSDRYPQCLCLSPTYELALQ 86
Query: 59 ICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSL 117
E+ + P++K+A G N K+ + +E QIV+GTPG +L ++ K +
Sbjct: 87 TGKVIEQMGKFYPELKLAYAVRG-N-KLERGQKISE--QIVIGTPGTVLDWCSKLKFIDP 142
Query: 118 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 177
K ++ F+LDE D M+ + + I +M P + Q+++FSAT + +K + DP
Sbjct: 143 KKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPN 202
Query: 178 EIYVDDEAKLTLHGLVQHYIKLSEL-EKNRKLNDLLDALDFNQVVIFV---KSVS-RAAE 232
I + E + TL + Q+Y+ S EK + L +L A+ Q +IF K+ S AAE
Sbjct: 203 VIKLKREEE-TLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAE 261
Query: 233 LNKLLVECNFPSICIHSG-MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVIN 291
L+K E + + + SG M E+R + F+EG +++LV T++ RGID+E+V++VIN
Sbjct: 262 LSK---EGH--QVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVIN 316
Query: 292 YDMPDSAD------TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKEL 344
+D+P D TYLHR+GR GRFG +GLA+ V S +ILN++Q F I+ L
Sbjct: 317 FDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 375
>UNIPROTKB|I3L0H8 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HGNC:HGNC:25628 EMBL:AC012184 ProteinModelPortal:I3L0H8 SMR:I3L0H8
PRIDE:I3L0H8 Ensembl:ENST00000417604 Bgee:I3L0H8 Uniprot:I3L0H8
Length = 447
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 126/347 (36%), Positives = 195/347 (56%)
Query: 11 LGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYL 70
L ++I Q++SG GKTA FVL+ L + EP+ L L T ELA Q E+ +
Sbjct: 98 LPQNLIAQSQSGTGKTAAFVLAMLSRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFY 157
Query: 71 PDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSLKNVRHFILDECD 129
P++K+A G N K+ + +E QIV+GTPG +L ++ K + K ++ F+LDE D
Sbjct: 158 PELKLAYAVRG-N-KLERGQKISE--QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEAD 213
Query: 130 KMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTL 189
M+ + + I +M P + Q+++FSAT + +K + DP I + E + TL
Sbjct: 214 VMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEE-TL 272
Query: 190 HGLVQHYIKLSEL-EKNRKLNDLLDALDFNQVVIFV---KSVS-RAAELNKLLVECNFPS 244
+ Q+Y+ S EK + L +L A+ Q +IF K+ S AAEL+K E +
Sbjct: 273 DTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSK---EGH--Q 327
Query: 245 ICIHSG-MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD---- 299
+ + SG M E+R + F+EG +++LV T++ RGID+E+V++VIN+D+P D
Sbjct: 328 VALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPD 387
Query: 300 --TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKEL 344
TYLHR+GR GRFG +GLA+ V S +ILN++Q F I+ L
Sbjct: 388 NETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 434
>UNIPROTKB|I3L352 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:25628 EMBL:AC012184
Ensembl:ENST00000575878 Uniprot:I3L352
Length = 396
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 127/359 (35%), Positives = 199/359 (55%)
Query: 1 MQHECIPQAILG--MDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQ 58
+Q +P + ++I Q++SG GKTA FVL+ L + EP+ L L T ELA Q
Sbjct: 35 IQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPSDRYPQCLCLSPTYELALQ 94
Query: 59 ICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSL 117
E+ + P++K+A G N K+ + +E QIV+GTPG +L ++ K +
Sbjct: 95 TGKVIEQMGKFYPELKLAYAVRG-N-KLERGQKISE--QIVIGTPGTVLDWCSKLKFIDP 150
Query: 118 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 177
K ++ F+LDE D M+ + + I +M P + Q+++FSAT + +K + DP
Sbjct: 151 KKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPN 210
Query: 178 EIYVDDEAKLTLHGLVQHYIKLSEL-EKNRKLNDLLDALDFNQVVIFV---KSVS-RAAE 232
I + E + TL + Q+Y+ S EK + L +L A+ Q +IF K+ S AAE
Sbjct: 211 VIKLKREEE-TLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAE 269
Query: 233 LNKLLVECNFPSICIHSG-MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVIN 291
L+K E + + + SG M E+R + F+EG +++LV T++ RGID+E+V++VIN
Sbjct: 270 LSK---EGH--QVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVIN 324
Query: 292 YDMPDSAD------TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKEL 344
+D+P D TYLHR+GR GRFG +GLA+ V S +ILN++Q F I+ L
Sbjct: 325 FDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 383
>UNIPROTKB|Q9NUU7 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0010043
"response to zinc ion" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0015031
GO:GO:0031965 GO:GO:0005643 GO:GO:0003723 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA CTD:55308
HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:AK001988 EMBL:AK223262
EMBL:AL832970 EMBL:CH471241 EMBL:BC005162 EMBL:BC006544
EMBL:BC137496 EMBL:BC137497 IPI:IPI00019918 RefSeq:NP_060802.1
UniGene:Hs.656037 ProteinModelPortal:Q9NUU7 SMR:Q9NUU7
IntAct:Q9NUU7 MINT:MINT-1450935 STRING:Q9NUU7 PhosphoSite:Q9NUU7
DMDM:73919226 PaxDb:Q9NUU7 PeptideAtlas:Q9NUU7 PRIDE:Q9NUU7
DNASU:55308 Ensembl:ENST00000302243 GeneID:55308 KEGG:hsa:55308
UCSC:uc002eyv.3 GeneCards:GC16P070380 H-InvDB:HIX0038837
HGNC:HGNC:25628 HPA:HPA045252 neXtProt:NX_Q9NUU7
PharmGKB:PA134894996 InParanoid:Q9NUU7 PhylomeDB:Q9NUU7
GenomeRNAi:55308 NextBio:59538 ArrayExpress:Q9NUU7 Bgee:Q9NUU7
CleanEx:HS_DDX19A Genevestigator:Q9NUU7 GermOnline:ENSG00000168872
Uniprot:Q9NUU7
Length = 478
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 127/359 (35%), Positives = 199/359 (55%)
Query: 1 MQHECIPQAILG--MDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQ 58
+Q +P + ++I Q++SG GKTA FVL+ L + EP+ L L T ELA Q
Sbjct: 117 IQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPSDRYPQCLCLSPTYELALQ 176
Query: 59 ICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSL 117
E+ + P++K+A G N K+ + +E QIV+GTPG +L ++ K +
Sbjct: 177 TGKVIEQMGKFYPELKLAYAVRG-N-KLERGQKISE--QIVIGTPGTVLDWCSKLKFIDP 232
Query: 118 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 177
K ++ F+LDE D M+ + + I +M P + Q+++FSAT + +K + DP
Sbjct: 233 KKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPN 292
Query: 178 EIYVDDEAKLTLHGLVQHYIKLSEL-EKNRKLNDLLDALDFNQVVIFV---KSVS-RAAE 232
I + E + TL + Q+Y+ S EK + L +L A+ Q +IF K+ S AAE
Sbjct: 293 VIKLKREEE-TLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAE 351
Query: 233 LNKLLVECNFPSICIHSG-MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVIN 291
L+K E + + + SG M E+R + F+EG +++LV T++ RGID+E+V++VIN
Sbjct: 352 LSK---EGH--QVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVIN 406
Query: 292 YDMPDSAD------TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKEL 344
+D+P D TYLHR+GR GRFG +GLA+ V S +ILN++Q F I+ L
Sbjct: 407 FDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 465
>TIGR_CMR|BA_2109 [details] [associations]
symbol:BA_2109 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:MMAINTI HSSP:P10081 HOGENOM:HOG000268811
RefSeq:NP_844507.1 RefSeq:YP_018751.1 RefSeq:YP_028224.1
ProteinModelPortal:Q81RE0 DNASU:1085806
EnsemblBacteria:EBBACT00000011412 EnsemblBacteria:EBBACT00000014072
EnsemblBacteria:EBBACT00000023039 GeneID:1085806 GeneID:2818618
GeneID:2851363 KEGG:ban:BA_2109 KEGG:bar:GBAA_2109 KEGG:bat:BAS1961
ProtClustDB:CLSK886848 BioCyc:BANT260799:GJAJ-2029-MONOMER
BioCyc:BANT261594:GJ7F-2106-MONOMER Uniprot:Q81RE0
Length = 389
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 112/332 (33%), Positives = 179/332 (53%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + IP + G DVI ++ +G GKT ++L L + P Q +VL TREL QI
Sbjct: 24 IQKQAIPTILEGQDVIAESPTGTGKTLAYLLPLLHKINPEVKQPQVVVLAPTRELVMQIH 83
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E ++F T +I A GG +IK + LK P+++VG+PGRIL L R K L + V
Sbjct: 84 EEVQKF-TAGTEISGASLIGGADIKRQVEKLKKH-PRVIVGSPGRILELIRMKKLKMHEV 141
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ + DE D++++ M VQ++ K T D+Q++ FSAT++K + +P +
Sbjct: 142 KTIVFDEFDQIVKQ-KMMGAVQDVIKSTMRDRQLVFFSATMTKAAEDAARDLAVEPQLVR 200
Query: 181 VDD-EAKLTLHGLVQH-YIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
V E+K LV+H YI EKN + ++ D + V F+ R E+ + L
Sbjct: 201 VTRAESK----SLVEHTYIICERREKNDYVRRIMHMGDV-KAVAFLNDPFRLDEITEKLK 255
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
+ +H+ S++ER + F+ G IL+ATD+ RGIDI+ + VI+ ++PD+
Sbjct: 256 FRKMKAAALHAEASKQEREATMRAFRGGKLEILLATDIAARGIDIDDLTHVIHLELPDTV 315
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDIL 330
D Y+HR GR GR G +G ++ V+ + +L
Sbjct: 316 DQYIHRSGRTGRMGKEGTVVSLVTPQEERKLL 347
>TIGR_CMR|DET_0183 [details] [associations]
symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
OMA:NFAPAVM ProtClustDB:CLSK837629
BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
Length = 560
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 116/355 (32%), Positives = 183/355 (51%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP-GQVTALVLCHTRELAYQI 59
+Q + IP + G DVI A++G GKTA + L +Q+ P G+V LVL TRELA QI
Sbjct: 27 IQAQAIPPILEGHDVIGLAQTGTGKTAAYALPVIQKMLSTPRGRVRTLVLAPTRELACQI 86
Query: 60 CHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKN 119
F I+ YGGVN+ L++ +VV PGR+L + +
Sbjct: 87 AESFRSLGQRAR-IRECSIYGGVNMDQQIRRLRSGV-DVVVACPGRLLDHIWRGTIDICG 144
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
V I+DE D+M + + + D+Q I K Q ++FSAT+ E+R + + +P+ I
Sbjct: 145 VETLIIDEADRMFD-MGFQPDIQSILKCLVQPHQTLLFSATMPPEVRKLTLETQTNPVTI 203
Query: 180 YVDDEAKLTLHGLVQHYI-KLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
+ +A + V H + + +K L ++L + V+IF ++ A L +
Sbjct: 204 QIGTQAPASS---VSHSVYPVKNHQKTPLLIEILKTTETKSVLIFARTKYGAENLADEIS 260
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
F + + +SQ R +GF+ GN +ILVATD+ RG+DI+ ++ VINYDMPD+
Sbjct: 261 RAGFTTASLQGNLSQNRRHAVMEGFRRGNFKILVATDIAARGLDIDHISHVINYDMPDTP 320
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTY 353
+ Y HR+GR GRF G A++ V+ D D++ +Q I+ L ++D Y
Sbjct: 321 EDYTHRIGRTGRFDRTGQALSLVTGR-DGDMVRDIQKLINSPIQRL--RVDGFDY 372
>UNIPROTKB|P21693 [details] [associations]
symbol:dbpA species:83333 "Escherichia coli K-12"
[GO:0003724 "RNA helicase activity" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0033677 "DNA/RNA helicase
activity" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IMP]
[GO:0034459 "ATP-dependent 3'-5' RNA helicase activity"
evidence=IDA] [GO:0019843 "rRNA binding" evidence=IDA] [GO:0043531
"ADP binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0043531
GO:GO:0019843 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:X52647 PIR:B64884 RefSeq:NP_415859.1 RefSeq:YP_489613.1
ProteinModelPortal:P21693 SMR:P21693 IntAct:P21693 PRIDE:P21693
EnsemblBacteria:EBESCT00000004879 EnsemblBacteria:EBESCT00000014318
GeneID:12933991 GeneID:947153 KEGG:ecj:Y75_p1320 KEGG:eco:b1343
PATRIC:32117966 EchoBASE:EB0206 EcoGene:EG10210
HOGENOM:HOG000268809 KO:K05591 OMA:HIDPARF ProtClustDB:PRK11776
BioCyc:EcoCyc:EG10210-MONOMER BioCyc:ECOL316407:JW1337-MONOMER
BioCyc:MetaCyc:EG10210-MONOMER Genevestigator:P21693 GO:GO:0034459
GO:GO:0033677 InterPro:IPR005580 Pfam:PF03880 Uniprot:P21693
Length = 457
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 106/335 (31%), Positives = 178/335 (53%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q +P + G DV QAK+G GKTA F L LQQ + + Q ALVLC TRELA Q+
Sbjct: 29 VQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVA 88
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
E R + +LP+ K+ GG + +D L++ P I+V TPGR+L + +SL +
Sbjct: 89 GELRRLARFLPNTKILTLCGGQPFGMQRDSLQH-APHIIVATPGRLLDHLQKGTVSLDAL 147
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
++DE D+ML+ + + ++ + P +Q ++FSAT + I + + +DP+ I
Sbjct: 148 NTLVMDEADRMLD-MGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLAIE 206
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 240
+D L + Q + + S K L LL + V+F + + L E
Sbjct: 207 IDSTDALP--PIEQQFYETSSKGKIPLLQRLLSLHQPSSCVVFCNTKKDCQAVCDALNEV 264
Query: 241 NFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADT 300
++ +H + Q +R F G+ R+LVATD+ RG+DI+ + +V+N+++ +
Sbjct: 265 GQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWDPEV 324
Query: 301 YLHRVGRAGRFGTKGLAITFVS--SASDSDILNQV 333
++HR+GR R G GLAI+F + A ++I++ +
Sbjct: 325 HVHRIGRTARAGNSGLAISFCAPEEAQRANIISDM 359
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 118/361 (32%), Positives = 191/361 (52%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQT---EPNP-GQ--VTALVLCHTRE 54
+Q + IP + G D++ A++G GKTA F L LQ +P+ G+ V AL+L TRE
Sbjct: 27 IQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRE 86
Query: 55 LAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKD 114
LA QI +S YL +I+ V +GGV+I L+ ++V TPGR+L L
Sbjct: 87 LAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMMKLRGGV-DVLVATPGRLLDLEHQNA 144
Query: 115 LSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQ 174
+ L V +LDE D+ML+ + D++ + P +Q ++FSAT S +I+ + +K +
Sbjct: 145 VKLDQVEILVLDEADRMLD-MGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLH 203
Query: 175 DPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELN 234
+P+EI V + QH + + K L+ ++ ++ QV++F ++ A L
Sbjct: 204 NPLEIEVA-RRNTASDQVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLA 262
Query: 235 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 294
+ L + S IH SQ R FK G+ R+LVATD+ RG+DIE + V+NY++
Sbjct: 263 EQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYEL 322
Query: 295 PDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
P+ + Y+HR+GR GR G A++ V + +L ++ + KE+P +I Y
Sbjct: 323 PNVPEDYVHRIGRTGRAAATGEALSLVC-VDEHKLLRDIEKLLK---KEIP-RIAIPGYE 377
Query: 355 P 355
P
Sbjct: 378 P 378
>UNIPROTKB|Q5ZMC1 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K01529 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA
GeneTree:ENSGT00530000063236 HOVERGEN:HBG107989 CTD:11269
EMBL:AADN02040672 UniGene:Gga.7753 EMBL:AJ719463 IPI:IPI00571485
RefSeq:NP_001006568.1 SMR:Q5ZMC1 Ensembl:ENSGALT00000039619
GeneID:426504 KEGG:gga:426504 InParanoid:Q5ZMC1 NextBio:20828056
Uniprot:Q5ZMC1
Length = 479
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 121/354 (34%), Positives = 189/354 (53%)
Query: 1 MQHECIPQAILG--MDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQ 58
+Q +P + ++I Q++SG GKTA FVL+ L + EP L L T ELA Q
Sbjct: 118 IQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPGNKYPQCLCLSPTYELALQ 177
Query: 59 ICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSL 117
E+ + P++K+A G N K+ + +E QIV+GTPG +L ++ K +
Sbjct: 178 TGKVIEQMGKFYPELKLAYAVRG-N-KLERGQKISE--QIVIGTPGTVLDWCSKLKFIDP 233
Query: 118 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 177
K ++ F+LDE D M+ + + I +M P D Q+++FSAT + +K + DP
Sbjct: 234 KKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRDCQMLLFSATFEDSVWKFAQKVVPDPN 293
Query: 178 EIYVDDEAKLTLHGLVQHYIKL-SELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKL 236
I + E + TL + Q+Y+ S EK R L ++ A+ Q ++F + A L
Sbjct: 294 IIKLKREEE-TLDTIKQYYVLCNSRDEKFRALCNIYGAITIAQAMVFCHTRKTAGWLAAE 352
Query: 237 LVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPD 296
L + + M E+R + F+EG +++LV T++ RGID+E+V++VIN+D+P
Sbjct: 353 LSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPV 412
Query: 297 SAD------TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKEL 344
D TYLHR+GR GRFG +GLAI V S +ILN++Q F I +L
Sbjct: 413 DKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKHSMNILNRIQEHFSKKINKL 466
>UNIPROTKB|H3BQK0 [details] [associations]
symbol:DDX19B "HCG1998531, isoform CRA_g" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:CH471241 EMBL:AC012184 HGNC:HGNC:2742
ChiTaRS:DDX19B SMR:H3BQK0 Ensembl:ENST00000563206 Uniprot:H3BQK0
Length = 484
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 126/344 (36%), Positives = 193/344 (56%)
Query: 14 DVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDI 73
++I Q++SG GKTA FVL+ L Q EP L L T ELA Q E+ + P++
Sbjct: 138 NLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPEL 197
Query: 74 KVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSLKNVRHFILDECDKML 132
K+A G N K+ + +E QIV+GTPG +L ++ K + K ++ F+LDE D M+
Sbjct: 198 KLAYAVRG-N-KLERGQKISE--QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMI 253
Query: 133 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 192
+ + I +M P + Q+++FSAT + +K + DP I + E + TL +
Sbjct: 254 ATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEE-TLDTI 312
Query: 193 VQHYIKLSEL-EKNRKLNDLLDALDFNQVVIFV---KSVS-RAAELNKLLVECNFPSICI 247
Q+Y+ S EK + L +L A+ Q +IF K+ S AAEL+K E + + +
Sbjct: 313 KQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSK---EGH--QVAL 367
Query: 248 HSG-MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD------T 300
SG M E+R + F+EG +++LV T++ RGID+E+V++VIN+D+P D T
Sbjct: 368 LSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNET 427
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKEL 344
YLHR+GR GRFG +GLA+ V S +ILN++Q F I+ L
Sbjct: 428 YLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 471
>UNIPROTKB|Q9UMR2 [details] [associations]
symbol:DDX19B "ATP-dependent RNA helicase DDX19B"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0006406 "mRNA export from nucleus" evidence=TAS]
[GO:0005635 "nuclear envelope" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0015031
GO:GO:0031965 GO:GO:0005643 GO:GO:0003723 GO:GO:0004386
GO:GO:0006406 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
OrthoDB:EOG46MBJK EMBL:CH471241 EMBL:AJ237946 EMBL:AF353720
EMBL:AL136639 EMBL:CR457215 EMBL:CR533509 EMBL:AK027378
EMBL:AK301938 EMBL:AK302107 EMBL:AK316346 EMBL:AC012184
EMBL:BC003626 EMBL:BC010008 IPI:IPI00008943 IPI:IPI00027599
IPI:IPI00556368 IPI:IPI00939593 RefSeq:NP_001014449.1
RefSeq:NP_001014451.1 RefSeq:NP_001244101.1 RefSeq:NP_001244102.1
RefSeq:NP_001244103.1 RefSeq:NP_009173.1 UniGene:Hs.221761 PDB:3EWS
PDB:3FHC PDB:3FHT PDB:3FMO PDB:3FMP PDB:3G0H PDBsum:3EWS
PDBsum:3FHC PDBsum:3FHT PDBsum:3FMO PDBsum:3FMP PDBsum:3G0H
ProteinModelPortal:Q9UMR2 SMR:Q9UMR2 DIP:DIP-48486N IntAct:Q9UMR2
MINT:MINT-1387516 STRING:Q9UMR2 PhosphoSite:Q9UMR2 DMDM:10719979
PaxDb:Q9UMR2 PRIDE:Q9UMR2 DNASU:11269 Ensembl:ENST00000288071
Ensembl:ENST00000355992 Ensembl:ENST00000393657
Ensembl:ENST00000451014 Ensembl:ENST00000563392
Ensembl:ENST00000568625 GeneID:11269 KEGG:hsa:11269 UCSC:uc002eyo.3
UCSC:uc002eyp.3 CTD:11269 GeneCards:GC16P070328 HGNC:HGNC:2742
HPA:CAB037284 MIM:605812 neXtProt:NX_Q9UMR2 PharmGKB:PA27208
InParanoid:Q9UMR2 OMA:HETIFEV PhylomeDB:Q9UMR2 ChiTaRS:DDX19B
EvolutionaryTrace:Q9UMR2 GenomeRNAi:11269 NextBio:42879
ArrayExpress:Q9UMR2 Bgee:Q9UMR2 CleanEx:HS_DDX19B
Genevestigator:Q9UMR2 GermOnline:ENSG00000157349 Uniprot:Q9UMR2
Length = 479
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 126/344 (36%), Positives = 193/344 (56%)
Query: 14 DVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDI 73
++I Q++SG GKTA FVL+ L Q EP L L T ELA Q E+ + P++
Sbjct: 133 NLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPEL 192
Query: 74 KVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSLKNVRHFILDECDKML 132
K+A G N K+ + +E QIV+GTPG +L ++ K + K ++ F+LDE D M+
Sbjct: 193 KLAYAVRG-N-KLERGQKISE--QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMI 248
Query: 133 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 192
+ + I +M P + Q+++FSAT + +K + DP I + E + TL +
Sbjct: 249 ATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEE-TLDTI 307
Query: 193 VQHYIKLSEL-EKNRKLNDLLDALDFNQVVIFV---KSVS-RAAELNKLLVECNFPSICI 247
Q+Y+ S EK + L +L A+ Q +IF K+ S AAEL+K E + + +
Sbjct: 308 KQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSK---EGH--QVAL 362
Query: 248 HSG-MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD------T 300
SG M E+R + F+EG +++LV T++ RGID+E+V++VIN+D+P D T
Sbjct: 363 LSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNET 422
Query: 301 YLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKEL 344
YLHR+GR GRFG +GLA+ V S +ILN++Q F I+ L
Sbjct: 423 YLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 466
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 120/358 (33%), Positives = 182/358 (50%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP-GQVTALVLCHTRELAYQI 59
+Q + IP + G DV+ A++G GKTA F L L + + G+V ALV+ TRELA QI
Sbjct: 27 IQAQAIPAVMAGRDVMGLAQTGTGKTAAFALPILHRLQQGERGRVRALVIAPTRELAEQI 86
Query: 60 CHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKN 119
F V V YGGV + LK ++VV PGR+L + L
Sbjct: 87 NDSFVTLGRQTRLRSVTV-YGGVGVNPQVQKLKAGA-EVVVACPGRLLDHIAQGTIDLSR 144
Query: 120 VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 179
+ +LDE D+M + + D++ + K P +Q ++FSAT+ +IR + + + DP+ +
Sbjct: 145 LEVLVLDEADQMFD-MGFLPDIRRVLKHLPPRRQTLLFSATMPIDIRTLAQDILVDPVTV 203
Query: 180 YVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLV 238
V A V H + E K L +LL D V+IF ++ RA L + L
Sbjct: 204 QVGTVAPAVT---VAHALYPVEQHLKTPLLLELLRHTDTESVLIFTRTKHRAKRLGEQLE 260
Query: 239 ECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSA 298
+ + + + +SQ R GF++G +ILVATD+ RGID+ +V+ VINYD+PD+A
Sbjct: 261 KAGYRAASLQGNLSQNRRQAALDGFRDGTFQILVATDIAARGIDVSQVSHVINYDIPDTA 320
Query: 299 DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ-IDTSTYMP 355
+ Y+HR+GR GR G A T V+S D ++ ++ I+ Q D S P
Sbjct: 321 EAYIHRIGRTGRAARSGDAFTLVTS-DDGAMVRAIERSLGAPIERRTVQGFDYSVPAP 377
>SGD|S000003931 [details] [associations]
symbol:DRS1 "Nucleolar DEAD-box protein required for ribosome
assembly and function" species:4932 "Saccharomyces cerevisiae"
[GO:0000027 "ribosomal large subunit assembly" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=TAS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000003931 GO:GO:0005524 GO:GO:0005730
EMBL:BK006945 GO:GO:0003723 GO:GO:0030687 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 EMBL:X91488
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
KO:K13181 OrthoDB:EOG4B01XM EMBL:L00683 EMBL:Z73113 PIR:S64750
RefSeq:NP_013093.1 ProteinModelPortal:P32892 SMR:P32892
DIP:DIP-6471N IntAct:P32892 MINT:MINT-648259 STRING:P32892
PaxDb:P32892 PeptideAtlas:P32892 EnsemblFungi:YLL008W GeneID:850652
KEGG:sce:YLL008W CYGD:YLL008w OMA:RIRKRDH NextBio:966605
Genevestigator:P32892 GermOnline:YLL008W Uniprot:P32892
Length = 752
Score = 471 (170.9 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 109/340 (32%), Positives = 190/340 (55%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA---LVLCHTRELAY 57
+Q IP A+LG D+I A +G GKTA F++ +++ P ++ + +VL TRELA
Sbjct: 257 IQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPTRELAI 316
Query: 58 QICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDK-DLS 116
Q+ ++ + ++ I + GG+N++ + +LK+ P IV+ TPGR + R+ +
Sbjct: 317 QVADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSR-PDIVIATPGRFIDHIRNSASFN 375
Query: 117 LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDP 176
+ +V ++DE D+MLE + ++ EI + P ++Q ++FSAT++ +I+ + ++ P
Sbjct: 376 VDSVEILVMDEADRMLEE-GFQDELNEIMGLLPSNRQNLLFSATMNSKIKSLVSLSLKKP 434
Query: 177 MEIYVDDEAKLTLHGLVQHYIKLSELE--KNRKLNDLLDALD---FNQVVIFVKSVSRAA 231
+ I +D K L Q ++++ + + K L +L+ LD ++V+FV A
Sbjct: 435 VRIMIDPPKKAATK-LTQEFVRIRKRDHLKPALLFNLIRKLDPTGQKRIVVFVARKETAH 493
Query: 232 ELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVIN 291
L ++ +H ++QE+RL FK +L+ TDL RG+DI ++ +VIN
Sbjct: 494 RLRIIMGLLGMSVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKIEVVIN 553
Query: 292 YDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAS-DSDIL 330
YDMP S + YLHRVGR R G +G ++TFV +S D I+
Sbjct: 554 YDMPKSYEIYLHRVGRTARAGREGRSVTFVGESSQDRSIV 593
>CGD|CAL0004058 [details] [associations]
symbol:DBP8 species:5476 "Candida albicans" [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004058 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:AACQ01000165 EMBL:AACQ01000186
RefSeq:XP_711718.1 RefSeq:XP_712192.1 ProteinModelPortal:Q59PR3
STRING:Q59PR3 GeneID:3646191 GeneID:3646692 KEGG:cal:CaO19.13973
KEGG:cal:CaO19.6652 KO:K14778 Uniprot:Q59PR3
Length = 440
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 121/362 (33%), Positives = 191/362 (52%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q CIP + G D I AK+G GKT F L Q +P + L+L TRELA QI
Sbjct: 27 IQSACIPAILKGHDCIGGAKTGSGKTIAFAAPMLTQWSEDPFGIFGLILTPTRELALQIA 86
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRI---LALARDKDLS- 116
+F + +IKVAV GG + + + L P V+ TPGR+ + + ++ +S
Sbjct: 87 EQFAALGANM-NIKVAVVVGGEDF-VQQTLALQRKPHFVIATPGRLADHILNSGEETISG 144
Query: 117 LKNVRHFILDECDKMLESLDMRRDVQEIFKMTP-HDK-QVMMFSATLSKEIRPVCKKFM- 173
L+ V++ +LDE D++L + D+Q F + P DK Q ++F+AT++ +R + +K
Sbjct: 145 LRRVKYLVLDEADRLLSN-SFGSDLQRCFDVLPTSDKRQTLLFTATITDAVRALKEKPPT 203
Query: 174 --QDPMEIY-VDDEAKLTLHGLVQ-HYIKLSELEKNRKLNDLLDALDFNQ--VVIFVKSV 227
+ P+ ++ V+ K+ + +Q Y+ + K LN +L F VIFV
Sbjct: 204 PGKPPVFMHEVETVDKVAIPSTLQISYVFVPSYVKEAYLNSILHLEQFKDSTAVIFVNRT 263
Query: 228 SRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVN 287
+ A L ++L + +F +HS M Q ER FK G RIL+ATD+ RG+DI V
Sbjct: 264 TTAEVLRRMLRKLDFRVASLHSEMPQSERTNSLHRFKAGAARILIATDVASRGLDIPTVE 323
Query: 288 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ 347
+VIN+D+P D ++HRVGR R G KG A++ + D D + ++ R + EL E
Sbjct: 324 LVINFDIPADPDDFIHRVGRTARAGRKGDAVSIIGE-KDIDRIQSIEERINKKM-ELLED 381
Query: 348 ID 349
++
Sbjct: 382 VN 383
>UNIPROTKB|Q5T1V6 [details] [associations]
symbol:DDX59 "Probable ATP-dependent RNA helicase DDX59"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 PROSITE:PS51083
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AL136611 EMBL:AL445483 EMBL:BC014183 EMBL:BC041801
IPI:IPI00010449 IPI:IPI00217157 RefSeq:NP_001026895.2
UniGene:Hs.497332 PDB:2YQP PDBsum:2YQP ProteinModelPortal:Q5T1V6
SMR:Q5T1V6 PhosphoSite:Q5T1V6 DMDM:74762230 PaxDb:Q5T1V6
PRIDE:Q5T1V6 DNASU:83479 Ensembl:ENST00000331314
Ensembl:ENST00000447706 GeneID:83479 KEGG:hsa:83479 UCSC:uc009wzk.3
CTD:83479 GeneCards:GC01M200594 HGNC:HGNC:25360 HPA:HPA047166
neXtProt:NX_Q5T1V6 PharmGKB:PA142672000 HOGENOM:HOG000006599
HOVERGEN:HBG106120 InParanoid:Q5T1V6 OMA:VTRPIID PhylomeDB:Q5T1V6
EvolutionaryTrace:Q5T1V6 GenomeRNAi:83479 NextBio:72419
ArrayExpress:Q5T1V6 Bgee:Q5T1V6 CleanEx:HS_DDX59
Genevestigator:Q5T1V6 Uniprot:Q5T1V6
Length = 619
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 113/357 (31%), Positives = 194/357 (54%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQIC 60
+Q + IP +LG D++ A +G GKTA F+L + + +AL+L TRELA QI
Sbjct: 229 IQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMRALFESKTPSALILTPTRELAIQIE 288
Query: 61 HEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNV 120
+ + + LP +K + GG+ + L+ ++++ TPGR+L + + + L V
Sbjct: 289 RQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHV-KVIIATPGRLLDIIKQSSVELCGV 347
Query: 121 RHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 180
+ ++DE D ML+ + ++ V +I + P+D Q ++ SAT+ I + + + +P+ I
Sbjct: 348 KIVVVDEADTMLK-MGFQQQVLDILENIPNDCQTILVSATIPTSIEQLASQLLHNPVRI- 405
Query: 181 VDDEAKLTLHGLVQHYIKLSELEKNRKLNDLL-DALDFNQ-VVIFVKSVSRAAELNKLLV 238
+ E L + Q + + + K +KL ++L D F V++FV A L++ +
Sbjct: 406 ITGEKNLPCANVRQIILWVEDPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLLSEAVQ 465
Query: 239 ECN-FPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDS 297
+ SI IHS SQ ER KG EG+ ++V+T ++GRG+D+ V +V+N+DMP S
Sbjct: 466 KITGLKSISIHSEKSQIERKNILKGLLEGDYEVVVSTGVLGRGLDLISVRLVVNFDMPSS 525
Query: 298 ADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 354
D Y+H++GR GR G G AITF+++ S + + R + LP Q+ S Y+
Sbjct: 526 MDEYVHQIGRVGRLGQNGTAITFINNNSKR-LFWDIAKRVKPTGSILPPQLLNSPYL 581
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 113/326 (34%), Positives = 184/326 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQ----VTALVLCHTRELA 56
+Q + IP + G D+I A++G GKTA FVL L++ Q V AL+L TRELA
Sbjct: 27 IQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKLRQGQTQRKKRVRALILVPTRELA 86
Query: 57 YQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLS 116
Q+ + E++ +AVF GGV+ + K L + ++V TPGR++ L + +
Sbjct: 87 MQVAEKVEQYGKDTGLKSLAVF-GGVDEQAQKQRLIDGV-DVLVATPGRLMDLYGQRAVY 144
Query: 117 LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDP 176
+ + +LDE D+ML+ + + +I P + Q ++FSATLS+++R + K ++DP
Sbjct: 145 FEEIEMVVLDEADRMLD-MGFIESINKIIDCLPSEVQFLLFSATLSRKVRELAKTAVRDP 203
Query: 177 MEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKL 236
EI + + + + Q I + + K+ L+ L++ ++Q +IF+++ AA+L
Sbjct: 204 HEISIAAN-QASKSNISQWLITVDKDTKSALLSHLINEQQWDQALIFIETKHGAAKLVSQ 262
Query: 237 LVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPD 296
L + + HSG SQ R + FK G + LVAT + RGIDI++++ V+NYD+P
Sbjct: 263 LEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVATGVAARGIDIDQLSRVVNYDLPF 322
Query: 297 SADTYLHRVGRAGRFGTKGLAITFVS 322
AD Y+HR+GR GR G AI+FVS
Sbjct: 323 PADEYVHRIGRTGRAEAVGEAISFVS 348
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 113/326 (34%), Positives = 184/326 (56%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQ----VTALVLCHTRELA 56
+Q + IP + G D+I A++G GKTA FVL L++ Q V AL+L TRELA
Sbjct: 27 IQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKLRQGQTQRKKRVRALILVPTRELA 86
Query: 57 YQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLS 116
Q+ + E++ +AVF GGV+ + K L + ++V TPGR++ L + +
Sbjct: 87 MQVAEKVEQYGKDTGLKSLAVF-GGVDEQAQKQRLIDGV-DVLVATPGRLMDLYGQRAVY 144
Query: 117 LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDP 176
+ + +LDE D+ML+ + + +I P + Q ++FSATLS+++R + K ++DP
Sbjct: 145 FEEIEMVVLDEADRMLD-MGFIESINKIIDCLPSEVQFLLFSATLSRKVRELAKTAVRDP 203
Query: 177 MEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKL 236
EI + + + + Q I + + K+ L+ L++ ++Q +IF+++ AA+L
Sbjct: 204 HEISIAAN-QASKSNISQWLITVDKDTKSALLSHLINEQQWDQALIFIETKHGAAKLVSQ 262
Query: 237 LVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPD 296
L + + HSG SQ R + FK G + LVAT + RGIDI++++ V+NYD+P
Sbjct: 263 LEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVATGVAARGIDIDQLSRVVNYDLPF 322
Query: 297 SADTYLHRVGRAGRFGTKGLAITFVS 322
AD Y+HR+GR GR G AI+FVS
Sbjct: 323 PADEYVHRIGRTGRAEAVGEAISFVS 348
>UNIPROTKB|Q8EI96 [details] [associations]
symbol:srmB "ATP-dependent RNA helicase SrmB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
HOGENOM:HOG000268807 KO:K05590 ProtClustDB:PRK11192
RefSeq:NP_716576.1 ProteinModelPortal:Q8EI96 GeneID:1168793
KEGG:son:SO_0947 PATRIC:23521551 Uniprot:Q8EI96
Length = 420
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 123/351 (35%), Positives = 187/351 (53%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP----GQVTALVLCHTRELA 56
+Q E +P A+ D++ +A +G GKTA F+L LQ P GQ L+L TRELA
Sbjct: 27 IQQETLPHALEQRDILARAPTGTGKTASFLLPALQHLIDFPRRYSGQARVLILTPTRELA 86
Query: 57 YQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLS 116
QI H + + +A+ GGV ++ LK I+V TPGR++ S
Sbjct: 87 SQI-HRYACHLATDQGLNIAIITGGVPYAPQEEALKGNI-DILVATPGRLMEYLDKGKFS 144
Query: 117 LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL--SKEIRPVCKKFMQ 174
++V I+DE D+ML+ + V+ I KQ M+FSATL S IR ++ +
Sbjct: 145 AESVDILIIDEADRMLD-MGFSAVVKAIALEAQGRKQNMLFSATLEGSGVIR-FAREVLN 202
Query: 175 DPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRK---LNDLLDALDFNQVVIFVKSVSRAA 231
DP+EI VD K + +I L++ +K+ K L LL D + ++FVK+ +
Sbjct: 203 DPIEIDVDAPRKEKAK--IHQWIHLAD-DKDHKFALLCHLLKQEDVKRAIVFVKTRDVVS 259
Query: 232 ELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVIN 291
L L++ P + M Q++R F +G +L+ATD+ RGIDI+ ++ VIN
Sbjct: 260 SLEGQLLQAGIPCAFMRGDMEQKKRFQALSRFTKGEVNVLLATDVAARGIDIDDISHVIN 319
Query: 292 YDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIK 342
+DMP SADTY+HR+GR GR G KG AI+ ++ A D I+ +++ E +K
Sbjct: 320 FDMPRSADTYIHRIGRTGRAGAKGTAIS-LAEAHDMRIVGKIERYIEQPLK 369
>TIGR_CMR|SO_0947 [details] [associations]
symbol:SO_0947 "ATP-dependent RNA helicase SrmB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
HOGENOM:HOG000268807 KO:K05590 ProtClustDB:PRK11192
RefSeq:NP_716576.1 ProteinModelPortal:Q8EI96 GeneID:1168793
KEGG:son:SO_0947 PATRIC:23521551 Uniprot:Q8EI96
Length = 420
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 123/351 (35%), Positives = 187/351 (53%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP----GQVTALVLCHTRELA 56
+Q E +P A+ D++ +A +G GKTA F+L LQ P GQ L+L TRELA
Sbjct: 27 IQQETLPHALEQRDILARAPTGTGKTASFLLPALQHLIDFPRRYSGQARVLILTPTRELA 86
Query: 57 YQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLS 116
QI H + + +A+ GGV ++ LK I+V TPGR++ S
Sbjct: 87 SQI-HRYACHLATDQGLNIAIITGGVPYAPQEEALKGNI-DILVATPGRLMEYLDKGKFS 144
Query: 117 LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL--SKEIRPVCKKFMQ 174
++V I+DE D+ML+ + V+ I KQ M+FSATL S IR ++ +
Sbjct: 145 AESVDILIIDEADRMLD-MGFSAVVKAIALEAQGRKQNMLFSATLEGSGVIR-FAREVLN 202
Query: 175 DPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRK---LNDLLDALDFNQVVIFVKSVSRAA 231
DP+EI VD K + +I L++ +K+ K L LL D + ++FVK+ +
Sbjct: 203 DPIEIDVDAPRKEKAK--IHQWIHLAD-DKDHKFALLCHLLKQEDVKRAIVFVKTRDVVS 259
Query: 232 ELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVIN 291
L L++ P + M Q++R F +G +L+ATD+ RGIDI+ ++ VIN
Sbjct: 260 SLEGQLLQAGIPCAFMRGDMEQKKRFQALSRFTKGEVNVLLATDVAARGIDIDDISHVIN 319
Query: 292 YDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIK 342
+DMP SADTY+HR+GR GR G KG AI+ ++ A D I+ +++ E +K
Sbjct: 320 FDMPRSADTYIHRIGRTGRAGAKGTAIS-LAEAHDMRIVGKIERYIEQPLK 369
>UNIPROTKB|P21507 [details] [associations]
symbol:srmB "SrmB, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0033592 "RNA strand annealing activity"
evidence=IDA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0000027 "ribosomal large subunit assembly"
evidence=IGI;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
EMBL:D64044 GO:GO:0030687 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0033592 EMBL:D13169
OMA:PLAMDQR HOGENOM:HOG000268807 PDB:2YJT PDBsum:2YJT EMBL:X14152
PIR:G65035 RefSeq:NP_417071.1 RefSeq:YP_490804.1
ProteinModelPortal:P21507 SMR:P21507 DIP:DIP-10920N IntAct:P21507
MINT:MINT-1225512 PRIDE:P21507 EnsemblBacteria:EBESCT00000003180
EnsemblBacteria:EBESCT00000015098 GeneID:12934372 GeneID:947055
KEGG:ecj:Y75_p2529 KEGG:eco:b2576 PATRIC:32120551 EchoBASE:EB0968
EcoGene:EG10975 KO:K05590 ProtClustDB:PRK11192
BioCyc:EcoCyc:EG10975-MONOMER BioCyc:ECOL316407:JW2560-MONOMER
Genevestigator:P21507 Uniprot:P21507
Length = 444
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 124/363 (34%), Positives = 186/363 (51%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNP----GQVTALVLCHTRELA 56
+Q IP A+ G DV+ A +G GKTA ++L LQ P G L+L TRELA
Sbjct: 30 IQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELA 89
Query: 57 YQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLS 116
Q+ + + + +A GGV H ++ +E IVV T GR+L ++++
Sbjct: 90 MQVSDHARELAKHT-HLDIATITGGVAYMNHAEVF-SENQDIVVATTGRLLQYIKEENFD 147
Query: 117 LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKE-IRPVCKKFMQD 175
+ V ILDE D+ML+ + +D++ I T KQ ++FSATL + I+ ++ ++D
Sbjct: 148 CRAVETLILDEADRMLD-MGFAQDIEHIAGETRWRKQTLLFSATLEGDAIQDFAERLLED 206
Query: 176 PMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELN 234
P+E+ + + + Q Y + +LE K L LL + + ++FV+ R EL
Sbjct: 207 PVEVSANPSTR-ERKKIHQWYYRADDLEHKTALLVHLLKQPEATRSIVFVRKRERVHELA 265
Query: 235 KLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDM 294
L E + + M Q +R K EG +LVATD+ RGIDI V+ V N+DM
Sbjct: 266 NWLREAGINNCYLEGEMVQGKRNEAIKRLTEGRVNVLVATDVAARGIDIPDVSHVFNFDM 325
Query: 295 PDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIK-ELPEQIDTSTY 353
P S DTYLHR+GR R G KG AI+ V A D +L +V E IK + +++ T
Sbjct: 326 PRSGDTYLHRIGRTARAGRKGTAISLVE-AHDHLLLGKVGRYIEEPIKARVIDELRPKTR 384
Query: 354 MPS 356
PS
Sbjct: 385 APS 387
>UNIPROTKB|A4QSS5 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase DBP2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
KEGG:mgr:MGG_16901 Uniprot:A4QSS5
Length = 548
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 118/356 (33%), Positives = 192/356 (53%)
Query: 1 MQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ--TEP--NPGQ-VTALVLCHTREL 55
+Q + P A+ G DV+ A++G GKT + L + +P PG L+L TREL
Sbjct: 151 IQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLILAPTREL 210
Query: 56 AYQICHEFERFSTYLPDIKVAVFYGGV--NIKIHKDLLKNECPQIVVGTPGRILALARDK 113
A QI E +F I+ YGGV +I +DL + ++ + TPGR++ +
Sbjct: 211 AVQIQAEISKFGKS-SRIRNTCVYGGVPKGPQI-RDLSRGV--EVCIATPGRLIDMLESG 266
Query: 114 DLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFM 173
+L+ V + +LDE D+ML+ + +++I D+Q +M+SAT KE+R + F+
Sbjct: 267 KTNLRRVTYLVLDEADRMLD-MGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRNMAADFL 325
Query: 174 QDPMEIYVDDEAKLTLHGLVQHYIKLSELEKN----RKLNDLLDALDF-NQVVIFVKSVS 228
QD +++ + H + Q +SE EK R + ++D D N+++IFV +
Sbjct: 326 QDFIQVNIGSLDLSANHRITQIVEVVSESEKRDRMIRHMEKVMDGKDSKNKILIFVGTKR 385
Query: 229 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNI 288
A E+ + L + +P++ IH Q ER FK G I+VATD+ RGID+ +
Sbjct: 386 VADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITH 445
Query: 289 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDS---DILNQVQ-ARFEVD 340
V+NYD P++++ Y+HR+GR GR G KG AITF ++ + D+L +Q A+ E+D
Sbjct: 446 VLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENSKQARDLLGVLQEAKQEID 501
>MGI|MGI:99526 [details] [associations]
symbol:Ddx19a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:99526
GO:GO:0005524 GO:GO:0005737 GO:GO:0015031 GO:GO:0031965
GO:GO:0005643 GO:GO:0003723 EMBL:CH466525 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236 CTD:55308
HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:L25125 EMBL:AK049467
EMBL:AK146548 EMBL:BC011270 IPI:IPI00123651 PIR:I49731
RefSeq:NP_031942.2 UniGene:Mm.287901 ProteinModelPortal:Q61655
SMR:Q61655 IntAct:Q61655 PhosphoSite:Q61655
REPRODUCTION-2DPAGE:Q61655 PaxDb:Q61655 PRIDE:Q61655
Ensembl:ENSMUST00000040416 GeneID:13680 KEGG:mmu:13680
InParanoid:Q543M2 ChiTaRS:DDX19A NextBio:284434 Bgee:Q61655
CleanEx:MM_DDX19A Genevestigator:Q61655
GermOnline:ENSMUSG00000015023 Uniprot:Q61655
Length = 478
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 126/359 (35%), Positives = 198/359 (55%)
Query: 1 MQHECIPQAILG--MDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQ 58
+Q +P + ++I Q++SG GKTA FVL+ L + EP L L T ELA Q
Sbjct: 117 IQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPADRYPQCLCLSPTYELALQ 176
Query: 59 ICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSL 117
E+ + P++K+A G N K+ + +E QIV+GTPG +L ++ K +
Sbjct: 177 TGKVIEQMGKFHPELKLAYAVRG-N-KLERGQKVSE--QIVIGTPGTVLDWCSKLKFIDP 232
Query: 118 KNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPM 177
K ++ F+LDE D M+ + + I +M P + Q+++FSAT + +K + DP
Sbjct: 233 KKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPN 292
Query: 178 EIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFV---KSVS-RAAE 232
I + E + TL + Q+Y+ + E K + L +L A+ Q +IF K+ S AAE
Sbjct: 293 IIKLKREEE-TLDTIKQYYVLCNNREEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAE 351
Query: 233 LNKLLVECNFPSICIHSG-MSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVIN 291
L+K E + + + SG M E+R + F+EG +++LV T++ RGID+E+V++VIN
Sbjct: 352 LSK---EGH--QVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVIN 406
Query: 292 YDMPDSAD------TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKEL 344
+D+P D TYLHR+GR GRFG +GLA+ V S +ILN++Q F I+ L
Sbjct: 407 FDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 465
>POMBASE|SPBC12C2.06 [details] [associations]
symbol:SPBC12C2.06 "cytoplasmic ATP-dependent RNA
helicase Dbp5 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0002184 "cytoplasmic translational termination" evidence=NAS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006415 "translational
termination" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC12C2.06 GO:GO:0005829 GO:GO:0005524
GO:GO:0005635 GO:GO:0015031 EMBL:CU329671 GO:GO:0031965
GO:GO:0005643 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0006406
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA OrthoDB:EOG4B2X5R
PIR:T39375 RefSeq:NP_596016.1 PDB:3FHO PDBsum:3FHO
ProteinModelPortal:Q09747 STRING:Q09747 PRIDE:Q09747
EnsemblFungi:SPBC12C2.06.1 GeneID:2539975 KEGG:spo:SPBC12C2.06
EvolutionaryTrace:Q09747 NextBio:20801118 GO:GO:0002184
Uniprot:Q09747
Length = 503
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 112/354 (31%), Positives = 186/354 (52%)
Query: 1 MQHECIPQAILG--MDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQ 58
+Q + +P + ++I Q++SG GKTA F L+ L + + + + A+ L +RELA Q
Sbjct: 140 IQEKALPLLLSNPPRNMIGQSQSGTGKTAAFALTMLSRVDASVPKPQAICLAPSRELARQ 199
Query: 59 ICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLK 118
I Y ++K A G+ + K K + QIV+GTPG ++ L + + L +
Sbjct: 200 IMDVVTEMGKYT-EVKTAF---GIKDSVPKGA-KIDA-QIVIGTPGTVMDLMKRRQLDAR 253
Query: 119 NVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPME 178
+++ F+LDE D ML+ + I + P + Q+++FSAT S+ + ++F + E
Sbjct: 254 DIKVFVLDEADNMLDQQGLGDQSMRIKHLLPRNTQIVLFSATFSERVEKYAERFAPNANE 313
Query: 179 IYVDDEAKLTLHGLVQHYIKL-SELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL 237
I + E +L++ G+ Q Y+ SE K L +L L Q +IF K A E+ + +
Sbjct: 314 IRLKTE-ELSVEGIKQLYMDCQSEEHKYNVLVELYGLLTIGQSIIFCKKKDTAEEIARRM 372
Query: 238 VECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMP-D 296
C+ + +R F+ G ++LV T+++ RGID+ +VN+V+NYDMP D
Sbjct: 373 TADGHTVACLTGNLEGAQRDAIMDSFRVGTSKVLVTTNVIARGIDVSQVNLVVNYDMPLD 432
Query: 297 SA-----DTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELP 345
A TYLHR+GR GRFG G++I FV + +N +Q F+ I +P
Sbjct: 433 QAGRPDPQTYLHRIGRTGRFGRVGVSINFVHDKKSWEEMNAIQEYFQRPITRVP 486
WARNING: HSPs involving 713 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 356 356 0.00080 117 3 11 22 0.50 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 963
No. of states in DFA: 587 (62 KB)
Total size of DFA: 216 KB (2121 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.56u 0.10s 33.66t Elapsed: 00:00:02
Total cpu time: 33.61u 0.10s 33.71t Elapsed: 00:00:02
Start: Sat May 11 12:53:05 2013 End: Sat May 11 12:53:07 2013
WARNINGS ISSUED: 2