Your job contains 1 sequence.
>018428
MKKSGAAEKKRVRRSSAVVQNGTRDPNSDTPPRKQAAKKDVFQLFAEKVRDHKDLESRWA
VLQETRVEYFRGKDFVSFLRNHPEVKDILESDRNLETEDIANALLSKNLLVRCDRVVKTL
RPGKKKLSTWPAHLEIFPEQVFSDNDAFFAWTFEKGRPLWQTLLSFFWPVLTLAICLFPV
YPHRCKLLILYSCAGVLLLILSLLFVRAAIFGMIWILLGKRVWFFPNILAEEATLRELFR
FWPKKDEEEKPKWAARLFYAVVAVLVILLLRHHAPDEAARARYQKRMSNIIDDVLEWSPR
LALSGMMEKQPDVANATEANGTFSDGSKTNPDEIVPPDADAETGNVHENDQHQDNI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018428
(356 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2088796 - symbol:AT3G20920 species:3702 "Arabi... 1231 2.6e-125 1
GENEDB_PFALCIPARUM|PF14_0361 - symbol:PF14_0361 "transloc... 173 1.3e-10 1
UNIPROTKB|Q8IL86 - symbol:PF14_0361 "Sec62, putative" spe... 173 1.3e-10 1
POMBASE|SPAC17G6.09 - symbol:sec62 "ER protein translocat... 159 2.0e-09 1
FB|FBgn0011584 - symbol:Trp1 "Translocation protein 1" sp... 140 3.6e-07 2
WB|WBGene00007683 - symbol:C18E9.2 species:6239 "Caenorha... 123 6.4e-05 1
MGI|MGI:1916526 - symbol:Sec62 "SEC62 homolog (S. cerevis... 118 0.00019 2
UNIPROTKB|F1MUP3 - symbol:SEC62 "Uncharacterized protein"... 118 0.00024 2
UNIPROTKB|J9NUW8 - symbol:SEC62 "Translocation protein SE... 118 0.00038 2
UNIPROTKB|Q5R4Q3 - symbol:SEC62 "Translocation protein SE... 115 0.00041 2
UNIPROTKB|Q5F3A1 - symbol:SEC62 "Translocation protein SE... 113 0.00043 2
UNIPROTKB|Q99442 - symbol:SEC62 "Translocation protein SE... 116 0.00046 1
SGD|S000006015 - symbol:SEC62 "Essential subunit of Sec63... 113 0.00049 1
CGD|CAL0001383 - symbol:SEC62 species:5476 "Candida albic... 113 0.00056 1
UNIPROTKB|Q5AI21 - symbol:SEC62 "Translocation protein SE... 113 0.00056 1
RGD|1308862 - symbol:Sec62 "SEC62 homolog (S. cerevisiae)... 118 0.00062 2
>TAIR|locus:2088796 [details] [associations]
symbol:AT3G20920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR004728 Pfam:PF03839 GO:GO:0016021
GO:GO:0005886 EMBL:CP002686 GO:GO:0008565 EMBL:AP001304
UniGene:At.26408 UniGene:At.6206 KO:K12275 PANTHER:PTHR12443
EMBL:AY056330 EMBL:AY114067 IPI:IPI00532961 RefSeq:NP_566671.1
PRIDE:Q9LIH2 EnsemblPlants:AT3G20920.1 GeneID:821641
KEGG:ath:AT3G20920 TAIR:At3g20920 InParanoid:Q9LIH2 OMA:LEWSPKL
PhylomeDB:Q9LIH2 ProtClustDB:CLSN2688610 ArrayExpress:Q9LIH2
Genevestigator:Q9LIH2 Uniprot:Q9LIH2
Length = 365
Score = 1231 (438.4 bits), Expect = 2.6e-125, P = 2.6e-125
Identities = 238/355 (67%), Positives = 267/355 (75%)
Query: 1 MKKSGAAEKKRVRRSSAVVQNGTRDPNSDTPPRKQAAKKDVFQLFAEKVRDHKDLESRWA 60
MKK AEKKRV+RSS RD SD+ PRKQA KKD FQLFAEKVRDHK LESRWA
Sbjct: 1 MKKPVGAEKKRVKRSSGSASTSVRDSGSDSQPRKQAVKKDSFQLFAEKVRDHKGLESRWA 60
Query: 61 VLQETRVEYFRGKDFVSFLRNHPEVKDILESDRNLETEDIANALLSKNLLVRCDRVVKTL 120
V+++ RVEYFRGKDFVSF++N+P+ KDILE D++L+T+DIAN LL KNLLVRCDRV KTL
Sbjct: 61 VMEQARVEYFRGKDFVSFMKNNPDFKDILEEDKDLDTDDIANVLLGKNLLVRCDRVTKTL 120
Query: 121 RPGKKKLSTWPAHLEIF-PEQVFSDNDAFFAWTFEKGRPLWQTLLSFFWPVLTLAICLFP 179
RPGKKKLSTWPAHLEIF +Q FS+NDAFFAWTFEK PLWQTLLSFFWPVLTLAICLFP
Sbjct: 121 RPGKKKLSTWPAHLEIFRDDQSFSENDAFFAWTFEKRHPLWQTLLSFFWPVLTLAICLFP 180
Query: 180 VYPHRCKLLILYSCAGVXXXXXXXXFVRAAIFGMIWILLGKRVWFFPNILAEEATLRELF 239
VYPHRCKL++LYSCAG+ FVRA FG +WILLGKRVWFFPNILAEEATL+ELF
Sbjct: 181 VYPHRCKLIVLYSCAGILLMILSLLFVRAVAFGAMWILLGKRVWFFPNILAEEATLKELF 240
Query: 240 RFWXXXXXXXXXXWAARLFYXXXXXXXXXXXRHHAPDEAARARYQKRMSNIIDDVLEWSP 299
RFW W +RLFY R HAPDEAARARYQ+RMSNIIDDVLEWSP
Sbjct: 241 RFWPKKDEEEPPKWTSRLFYTVVAIVVVMLLRRHAPDEAARARYQRRMSNIIDDVLEWSP 300
Query: 300 RLALSGMMEKQPDVANATEANGTFSDGSKTNPDEIVPPDADAETGNVHENDQHQD 354
+LALSG+ME Q V N T+A SD S PD+ D D G + Q ++
Sbjct: 301 KLALSGLMENQQPV-NITDAANNSSD-SAGGPDQTEEVDLDETQGEDLDETQGKE 353
>GENEDB_PFALCIPARUM|PF14_0361 [details] [associations]
symbol:PF14_0361 "translocation protein sec62,
putative" species:5833 "Plasmodium falciparum" [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=ISS] InterPro:IPR000591 InterPro:IPR004728 Pfam:PF03839
PROSITE:PS50186 GO:GO:0016021 GO:GO:0035556 GO:GO:0008565
GO:GO:0005622 EMBL:AE014187 GO:GO:0006614 KO:K12275
PANTHER:PTHR12443 RefSeq:XP_001348535.2 ProteinModelPortal:Q8IL86
PRIDE:Q8IL86 EnsemblProtists:PF14_0361:mRNA GeneID:811943
KEGG:pfa:PF14_0361 EuPathDB:PlasmoDB:PF3D7_1438100
HOGENOM:HOG000282171 ProtClustDB:CLSZ2428924 Uniprot:Q8IL86
Length = 377
Score = 173 (66.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 55/186 (29%), Positives = 82/186 (44%)
Query: 67 VEYFRGKDFVSFLRNHPEV--KDI--LESDRNL----ETEDIANALLSKNLLVRCD-RVV 117
VEYFRG DFV+FL + E+ K L +RNL E E+ A+ + K + + + +
Sbjct: 37 VEYFRGDDFVNFLSTNGEMLKKKFPNLFINRNLSDMKEIEEFADMFIQKGYIYKAQYKPI 96
Query: 118 KTLRP----GKKKLSTWPAHLEIFPEQVFSDNDAFFAWTFEKGRPLWQTLLSFFWPVLTL 173
K + G K WP L + +Q F D +F+ E+ + L +L ++ L
Sbjct: 97 KGINEKDENGVYKRPKWPKRLIMTSKQNF-DKTSFYILVHERNKKLQYFMLISLISIV-L 154
Query: 174 AICLFPVYPHRCKLLILYSCAGVXXXXXXXXFVRAAIFGMIWILLGKRVWFFPNILAEEA 233
C+FPV+P R KL + + R F W G W FPN+ EE
Sbjct: 155 ICCMFPVWPLRLKLALWHISVAFLTLISIIIVGRLVAFIFFWFF-GVDYWIFPNLFDEEC 213
Query: 234 TLRELF 239
+ E F
Sbjct: 214 NVVESF 219
>UNIPROTKB|Q8IL86 [details] [associations]
symbol:PF14_0361 "Sec62, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=ISS]
InterPro:IPR000591 InterPro:IPR004728 Pfam:PF03839 PROSITE:PS50186
GO:GO:0016021 GO:GO:0035556 GO:GO:0008565 GO:GO:0005622
EMBL:AE014187 GO:GO:0006614 KO:K12275 PANTHER:PTHR12443
RefSeq:XP_001348535.2 ProteinModelPortal:Q8IL86 PRIDE:Q8IL86
EnsemblProtists:PF14_0361:mRNA GeneID:811943 KEGG:pfa:PF14_0361
EuPathDB:PlasmoDB:PF3D7_1438100 HOGENOM:HOG000282171
ProtClustDB:CLSZ2428924 Uniprot:Q8IL86
Length = 377
Score = 173 (66.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 55/186 (29%), Positives = 82/186 (44%)
Query: 67 VEYFRGKDFVSFLRNHPEV--KDI--LESDRNL----ETEDIANALLSKNLLVRCD-RVV 117
VEYFRG DFV+FL + E+ K L +RNL E E+ A+ + K + + + +
Sbjct: 37 VEYFRGDDFVNFLSTNGEMLKKKFPNLFINRNLSDMKEIEEFADMFIQKGYIYKAQYKPI 96
Query: 118 KTLRP----GKKKLSTWPAHLEIFPEQVFSDNDAFFAWTFEKGRPLWQTLLSFFWPVLTL 173
K + G K WP L + +Q F D +F+ E+ + L +L ++ L
Sbjct: 97 KGINEKDENGVYKRPKWPKRLIMTSKQNF-DKTSFYILVHERNKKLQYFMLISLISIV-L 154
Query: 174 AICLFPVYPHRCKLLILYSCAGVXXXXXXXXFVRAAIFGMIWILLGKRVWFFPNILAEEA 233
C+FPV+P R KL + + R F W G W FPN+ EE
Sbjct: 155 ICCMFPVWPLRLKLALWHISVAFLTLISIIIVGRLVAFIFFWFF-GVDYWIFPNLFDEEC 213
Query: 234 TLRELF 239
+ E F
Sbjct: 214 NVVESF 219
>POMBASE|SPAC17G6.09 [details] [associations]
symbol:sec62 "ER protein translocation subcomplex
subunit Sec62 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0006620
"posttranslational protein targeting to membrane" evidence=ISO]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0030176 "integral to endoplasmic reticulum membrane"
evidence=IEA] [GO:0031207 "Sec62/Sec63 complex" evidence=ISO]
InterPro:IPR004728 InterPro:IPR011553 Pfam:PF03839
PomBase:SPAC17G6.09 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0008565 GO:GO:0030176 GO:GO:0006620 eggNOG:COG5232 KO:K12275
PANTHER:PTHR12443 TIGRFAMs:TIGR00869 PIR:T37841 RefSeq:NP_594256.1
STRING:O13787 EnsemblFungi:SPAC17G6.09.1 GeneID:2542396
KEGG:spo:SPAC17G6.09 OMA:NLFEDCG OrthoDB:EOG40S3R3 NextBio:20803455
GO:GO:0031207 Uniprot:O13787
Length = 273
Score = 159 (61.0 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 56/212 (26%), Positives = 96/212 (45%)
Query: 27 NSDTPPRKQAAKKDVFQLFAEKVRDHKDLESRWAVLQETRVEYFRGKDFVSFLRNH---P 83
+S+ P K K F ++ +L+++ A+L RV YFR K + FL + P
Sbjct: 3 SSNVPVLKDEDKCKFSMRFTNFLKSRPELKTKPAILNGKRVYYFRVKRVLRFLTSEAYTP 62
Query: 84 E-VKDILESDRNLETEDIANALLSKNLLVRCDRVVKTLRPGKKKLSTWPAHLEIFPEQVF 142
+ K E E ++ L+ ++LVR D++ R K+KL L+I Q F
Sbjct: 63 KKYKGFPEISSREEAIEVLKLLIMNSMLVRVDKLPPKQR--KQKL----VELQINRNQDF 116
Query: 143 SDNDAFFAWTFEKGRPLWQTLLSFFWPVLTLAICLFPVYPHRCKLLILYSCAG---VXXX 199
D D + W +E P L+ + ++ LA+ LFP++P + Y G V
Sbjct: 117 QD-DMHYVWLYEP-LPKRVMALAVLFALVVLALVLFPLWPMFMRKGAWYLSMGGLGVIGL 174
Query: 200 XXXXXFVRAAIFGMIWILLGKRVWFFPNILAE 231
+R +F + +++ +W FPN+LA+
Sbjct: 175 FFVLVILRFFLFCITAVIVRPGIWLFPNLLAD 206
>FB|FBgn0011584 [details] [associations]
symbol:Trp1 "Translocation protein 1" species:7227
"Drosophila melanogaster" [GO:0005784 "Sec61 translocon complex"
evidence=ISS;NAS] [GO:0006614 "SRP-dependent cotranslational
protein targeting to membrane" evidence=ISS] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR004728 Pfam:PF03839
GO:GO:0016021 EMBL:AE014134 GO:GO:0008565 KO:K12275
PANTHER:PTHR12443 GeneTree:ENSGT00390000002757 FlyBase:FBgn0011584
ChiTaRS:TRNAP1 EMBL:BT099837 RefSeq:NP_723510.1 UniGene:Dm.4795
STRING:Q9VL49 EnsemblMetazoa:FBtr0079932 GeneID:34333
KEGG:dme:Dmel_CG4758 UCSC:CG4758-RB CTD:34333 InParanoid:Q9VL49
OMA:SHIVEYF GenomeRNAi:34333 NextBio:787992 Uniprot:Q9VL49
Length = 428
Score = 140 (54.3 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 35/124 (28%), Positives = 57/124 (45%)
Query: 124 KKKLSTWPAHLEIFPEQVFSDNDAFFAWTFEKGRPLWQTLLSFFWPVLTLAICLFPVYPH 183
KK+ L++ PEQ+F D + W ++ PL + F + + ICLFP++P
Sbjct: 174 KKEKKKRKIRLDMHPEQIFVDGSEAYVWIYDP-IPLHYWIFGFILLLGAVGICLFPLWPP 232
Query: 184 RCKLLILY---SCAGVXXXXXXXXFVRAAIFGMIWILLGKRV--WFFPNILAEEATLREL 238
+ + Y + AG VR +F ++W L G ++ W FPN L E+ +
Sbjct: 233 LLRKGVYYLSIAAAGFLVFILALTIVRLIVFIIVWALTGGKLHFWIFPN-LTEDVSF--F 289
Query: 239 FRFW 242
FW
Sbjct: 290 ASFW 293
Score = 44 (20.5 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 3 KSGAAEKKRVRRSSAVVQNGTRDPNSDTPPRKQAAKKDVFQLFAEKVRDHKDLESR 58
KSG +K ++ ++ +D DT P + D EK ++ K+ + R
Sbjct: 125 KSGGDKKADKEKTQDKEKDKAKDEKKDTDPEGDNGQGDGGASGNEKEKEKKEKKKR 180
>WB|WBGene00007683 [details] [associations]
symbol:C18E9.2 species:6239 "Caenorhabditis elegans"
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] InterPro:IPR004728 Pfam:PF03839
GO:GO:0016021 GO:GO:0008565 GO:GO:0040011 GO:GO:0040015
eggNOG:COG5232 KO:K12275 PANTHER:PTHR12443
GeneTree:ENSGT00390000002757 HOGENOM:HOG000016701 OMA:TDEGDCE
EMBL:Z70034 PIR:T19402 RefSeq:NP_495908.2 ProteinModelPortal:Q18093
STRING:Q18093 PaxDb:Q18093 EnsemblMetazoa:C18E9.2a GeneID:174429
KEGG:cel:CELE_C18E9.2 UCSC:C18E9.2a CTD:174429 WormBase:C18E9.2a
InParanoid:Q18093 NextBio:883998 Uniprot:Q18093
Length = 364
Score = 123 (48.4 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 45/178 (25%), Positives = 79/178 (44%)
Query: 71 RGKDFVSFLRNHPEVKDILES-DRNLETEDIANALLSKNLLVRCDRVVKTLRPGKKKLST 129
+G D + + P K ++E ++ + E+ A V+ D K KKK+
Sbjct: 106 KGNDSSAEVTKSP--KGVVEKRNKKAKEEETATEAEGDEKEVKKDEK-KDEEKKKKKVK- 161
Query: 130 WPAHLEIFPEQVFSDNDAFFAWTFEKGRPLWQTLLSFFWPVLTLAICLFPVYPHRCKLLI 189
L + Q F D+ + W F+ PL + ++ V T+ CLFP++P + +
Sbjct: 162 ----LLVHEVQAFVDDKDVYVWVFDP-TPLMKKIIGVLMLVGTIVGCLFPLWPVWLRQGV 216
Query: 190 LY-SCAGVX--XXXXXXXFVRAAIFGMIW-ILLGK-RVWFFPNILAEEATLRELFRFW 242
Y S G+ +R +FG+I+ + GK ++W PN L E+ + E F+ W
Sbjct: 217 YYVSITGIGCFAAIIVTAILRTILFGIIYAVTFGKHKLWVLPN-LTEDCGVLESFQPW 273
>MGI|MGI:1916526 [details] [associations]
symbol:Sec62 "SEC62 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR004728
Pfam:PF03839 MGI:MGI:1916526 GO:GO:0016021 GO:GO:0005789
GO:GO:0008565 GO:GO:0045111 GO:GO:0016235 eggNOG:COG5232 KO:K12275
PANTHER:PTHR12443 CTD:7095 GeneTree:ENSGT00390000002757
HOGENOM:HOG000016701 HOVERGEN:HBG055550 OMA:TDEGDCE
OrthoDB:EOG43R3NC ChiTaRS:SEC62 EMBL:AK088093 EMBL:BC067202
IPI:IPI00134398 RefSeq:NP_081292.1 UniGene:Mm.26017
ProteinModelPortal:Q8BU14 STRING:Q8BU14 PhosphoSite:Q8BU14
PaxDb:Q8BU14 PRIDE:Q8BU14 Ensembl:ENSMUST00000029256 GeneID:69276
KEGG:mmu:69276 UCSC:uc008ovh.1 InParanoid:Q8BU14 NextBio:329013
Bgee:Q8BU14 Genevestigator:Q8BU14 GermOnline:ENSMUSG00000027706
Uniprot:Q8BU14
Length = 398
Score = 118 (46.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 31/117 (26%), Positives = 52/117 (44%)
Query: 122 PG--KKKLSTWPAHLEIFPEQVFSDNDAFFAWTFEKGRPLWQTLLSFFWPVLTLAICLFP 179
PG KKK + LE +QVF D + F W ++ + ++ + +A LFP
Sbjct: 156 PGTPKKKETKKKFKLEPHDDQVFLDGNEVFVWIYDPVH-IKTFVMGLILVIAVIAATLFP 214
Query: 180 VYPHRCKLLILYSCAGVX---XXXXXXXFVRAAIFGMIWILLGKR--VWFFPNILAE 231
++P ++ + Y G R +F +IW++ G R WF PN+ A+
Sbjct: 215 LWPAEMRVGVYYLSVGAGCFVASILLLAIARCILFLIIWLITGGRHHFWFLPNLTAD 271
Score = 41 (19.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 7/37 (18%), Positives = 18/37 (48%)
Query: 3 KSGAAEKKRVRRSSAVVQNGTRDPNSDTPPRKQAAKK 39
K +K++ ++ ++ ++ TP +K+ KK
Sbjct: 131 KEEKTKKEKEKKKDGEKEDSKKEETPGTPKKKETKKK 167
>UNIPROTKB|F1MUP3 [details] [associations]
symbol:SEC62 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016235 "aggresome" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] InterPro:IPR004728 Pfam:PF03839 GO:GO:0005783
GO:GO:0016021 GO:GO:0008565 GO:GO:0045111 GO:GO:0016235
PANTHER:PTHR12443 GeneTree:ENSGT00390000002757 OMA:TDEGDCE
EMBL:DAAA02002209 IPI:IPI00707795 Ensembl:ENSBTAT00000009720
Uniprot:F1MUP3
Length = 399
Score = 118 (46.6 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 33/119 (27%), Positives = 57/119 (47%)
Query: 122 PG--KKKLSTWPAHLEIFPEQVFSDNDAFFAWTFEKGRPL-WQT-LLSFFWPVLTLAICL 177
PG KKK + LE +QVF D + F W ++ P+ ++T ++ + +A L
Sbjct: 156 PGTPKKKETKKKFKLEPHDDQVFLDGNEVFVWIYD---PVHFKTFVMGLILVIAVIAATL 212
Query: 178 FPVYPHRCKLLILYSCAGVXXXXXXXXFV---RAAIFGMIWILLGKR--VWFFPNILAE 231
FP++P ++ + Y G + R +F +IW++ G R WF PN+ A+
Sbjct: 213 FPLWPAEMRVGVYYLSVGAGCFVASILLLAVARCILFLIIWLITGGRHHFWFLPNLTAD 271
Score = 40 (19.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 7/37 (18%), Positives = 17/37 (45%)
Query: 3 KSGAAEKKRVRRSSAVVQNGTRDPNSDTPPRKQAAKK 39
K +K++ ++ + ++ TP +K+ KK
Sbjct: 131 KDEKTKKEKEKKKDGEKEESKKEETPGTPKKKETKKK 167
>UNIPROTKB|J9NUW8 [details] [associations]
symbol:SEC62 "Translocation protein SEC62" species:9615
"Canis lupus familiaris" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] InterPro:IPR004728 Pfam:PF03839 GO:GO:0016021
GO:GO:0008565 KO:K12275 PANTHER:PTHR12443 CTD:7095
GeneTree:ENSGT00390000002757 OMA:TDEGDCE EMBL:AAEX03017369
EMBL:AAEX03017370 RefSeq:XP_851757.2 Ensembl:ENSCAFT00000049719
GeneID:609416 KEGG:cfa:609416 Uniprot:J9NUW8
Length = 399
Score = 118 (46.6 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 33/119 (27%), Positives = 57/119 (47%)
Query: 122 PG--KKKLSTWPAHLEIFPEQVFSDNDAFFAWTFEKGRPL-WQT-LLSFFWPVLTLAICL 177
PG KKK + LE +QVF D + F W ++ P+ ++T ++ + +A L
Sbjct: 156 PGTPKKKETKKKFKLEPHDDQVFLDGNEVFVWIYD---PVHFKTFVMGLILVIAVIAATL 212
Query: 178 FPVYPHRCKLLILYSCAGVXXXXXXXXFV---RAAIFGMIWILLGKR--VWFFPNILAE 231
FP++P ++ + Y G + R +F +IW++ G R WF PN+ A+
Sbjct: 213 FPLWPAEMRVGVYYLSVGAGCFVASILLLAVARCILFLIIWLITGGRHHFWFLPNLTAD 271
Score = 38 (18.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 7/37 (18%), Positives = 17/37 (45%)
Query: 3 KSGAAEKKRVRRSSAVVQNGTRDPNSDTPPRKQAAKK 39
K +K++ ++ + ++ TP +K+ KK
Sbjct: 131 KDEKTKKEKEKKKDGEKEEPKKEETPGTPKKKETKKK 167
>UNIPROTKB|Q5R4Q3 [details] [associations]
symbol:SEC62 "Translocation protein SEC62" species:9601
"Pongo abelii" [GO:0005791 "rough endoplasmic reticulum"
evidence=ISS] InterPro:IPR004728 Pfam:PF03839 GO:GO:0016021
GO:GO:0005789 GO:GO:0008565 GO:GO:0005791 GO:GO:0045111
GO:GO:0016235 KO:K12275 PANTHER:PTHR12443 CTD:7095
GeneTree:ENSGT00390000002757 HOVERGEN:HBG055550 EMBL:CR861192
EMBL:CR926121 RefSeq:NP_001127648.1 UniGene:Pab.17966
UniGene:Pab.19567 Ensembl:ENSPPYT00000016605 GeneID:100174729
KEGG:pon:100174729 InParanoid:Q5R4Q3 Uniprot:Q5R4Q3
Length = 399
Score = 115 (45.5 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 32/119 (26%), Positives = 57/119 (47%)
Query: 122 PG--KKKLSTWPAHLEIFPEQVFSDNDAFFAWTFEKGRPL-WQT-LLSFFWPVLTLAICL 177
PG KKK + LE +QVF D + + W ++ P+ ++T ++ + +A L
Sbjct: 156 PGTPKKKETKKKFKLEPHDDQVFLDGNEVYVWIYD---PVHFKTFVMGLILVIAVIAATL 212
Query: 178 FPVYPHRCKLLILYSCAGVXXXXXXXXFV---RAAIFGMIWILLGKR--VWFFPNILAE 231
FP++P ++ + Y G + R +F +IW++ G R WF PN+ A+
Sbjct: 213 FPLWPAEMRVGVYYLSVGAGCFVASILLLAVARCILFLIIWLITGGRHHFWFLPNLTAD 271
Score = 41 (19.5 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 7/37 (18%), Positives = 18/37 (48%)
Query: 3 KSGAAEKKRVRRSSAVVQNGTRDPNSDTPPRKQAAKK 39
K +K++ ++ ++ ++ TP +K+ KK
Sbjct: 131 KDEKTKKEKEKKKDGEKEDSKKEETPGTPKKKETKKK 167
>UNIPROTKB|Q5F3A1 [details] [associations]
symbol:SEC62 "Translocation protein SEC62" species:9031
"Gallus gallus" [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IEA] InterPro:IPR004728
Pfam:PF03839 GO:GO:0016021 GO:GO:0005789 GO:GO:0008565
GO:GO:0045111 GO:GO:0016235 eggNOG:COG5232 KO:K12275
PANTHER:PTHR12443 EMBL:AJ851749 IPI:IPI00577659
RefSeq:NP_001012620.1 UniGene:Gga.20534 ProteinModelPortal:Q5F3A1
STRING:Q5F3A1 PRIDE:Q5F3A1 Ensembl:ENSGALT00000015276 GeneID:424993
KEGG:gga:424993 CTD:7095 GeneTree:ENSGT00390000002757
HOGENOM:HOG000016701 HOVERGEN:HBG055550 InParanoid:Q5F3A1
OMA:TDEGDCE OrthoDB:EOG43R3NC NextBio:20827247 Uniprot:Q5F3A1
Length = 398
Score = 113 (44.8 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 32/119 (26%), Positives = 56/119 (47%)
Query: 122 PG--KKKLSTWPAHLEIFPEQVFSDNDAFFAWTFEKGRPL-WQTL-LSFFWPVLTLAICL 177
PG KKK + LE +QVF D + + W ++ P+ ++T + + +A L
Sbjct: 156 PGTPKKKETKRKFKLEPHEDQVFLDGNEVYVWIYD---PVHFKTFAMGLVLVIAVIAATL 212
Query: 178 FPVYPHRCKLLILYSCAGVXXXXXXXXFV---RAAIFGMIWILLGKR--VWFFPNILAE 231
FP++P ++ + Y G + R +F +IW++ G R WF PN+ A+
Sbjct: 213 FPLWPAEMRVGVYYLSVGAGCFVASILLLAVARCILFLIIWLITGGRHHFWFLPNLTAD 271
Score = 43 (20.2 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 3 KSGAAEKKRVRRSSAVVQNGTRDPNSDTPPRKQAAKKD 40
+SG E+K+ ++ S+ + ++ K+ KKD
Sbjct: 116 ESGKEEEKKSKKESSKDEKTKKEKEKKKDGEKEECKKD 153
>UNIPROTKB|Q99442 [details] [associations]
symbol:SEC62 "Translocation protein SEC62" species:9606
"Homo sapiens" [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0005791 "rough endoplasmic reticulum" evidence=ISS] [GO:0004872
"receptor activity" evidence=TAS] [GO:0006613 "cotranslational
protein targeting to membrane" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016235 "aggresome"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR004728 Pfam:PF03839 GO:GO:0016021
GO:GO:0005789 GO:GO:0008565 EMBL:CH471052 GO:GO:0005791
GO:GO:0004872 GO:GO:0045111 GO:GO:0016235 GO:GO:0006613
eggNOG:COG5232 KO:K12275 PANTHER:PTHR12443 CTD:7095
HOGENOM:HOG000016701 HOVERGEN:HBG055550 OMA:TDEGDCE
OrthoDB:EOG43R3NC EMBL:D87127 EMBL:AB024586 EMBL:U93239
EMBL:BC012035 IPI:IPI00019004 PIR:JC5279 RefSeq:NP_003253.1
UniGene:Hs.713245 ProteinModelPortal:Q99442 IntAct:Q99442
MINT:MINT-2863594 STRING:Q99442 TCDB:1.A.15.2.1 PhosphoSite:Q99442
DMDM:74732781 PaxDb:Q99442 PeptideAtlas:Q99442 PRIDE:Q99442
DNASU:7095 Ensembl:ENST00000337002 Ensembl:ENST00000480708
GeneID:7095 KEGG:hsa:7095 UCSC:uc003fgg.3 GeneCards:GC03P169684
HGNC:HGNC:11846 HPA:HPA014059 MIM:602173 neXtProt:NX_Q99442
PharmGKB:PA162402849 InParanoid:Q99442 PhylomeDB:Q99442
ChiTaRS:SEC62 GenomeRNAi:7095 NextBio:27755 ArrayExpress:Q99442
Bgee:Q99442 CleanEx:HS_SEC62 Genevestigator:Q99442
GermOnline:ENSG00000008952 Uniprot:Q99442
Length = 399
Score = 116 (45.9 bits), Expect = 0.00046, P = 0.00046
Identities = 39/155 (25%), Positives = 69/155 (44%)
Query: 90 ESDRNLETEDIANALLSKNLLVRCD----RVVKTLRPG--KKKLSTWPAHLEIFPEQVFS 143
E D+ + E+I + K + D K PG KKK + LE +QVF
Sbjct: 120 EEDKKSKKENIKDEKTKKEKEKKKDGEKEESKKEETPGTPKKKETKKKFKLEPHDDQVFL 179
Query: 144 DNDAFFAWTFEKGRPL-WQT-LLSFFWPVLTLAICLFPVYPHRCKLLILYSCAGVXXXXX 201
D + + W ++ P+ ++T ++ + +A LFP++P ++ + Y G
Sbjct: 180 DGNEVYVWIYD---PVHFKTFVMGLILVIAVIAATLFPLWPAEMRVGVYYLSVGAGCFVA 236
Query: 202 XXXFV---RAAIFGMIWILLGKR--VWFFPNILAE 231
+ R +F +IW++ G R WF PN+ A+
Sbjct: 237 SILLLAVARCILFLIIWLITGGRHHFWFLPNLTAD 271
>SGD|S000006015 [details] [associations]
symbol:SEC62 "Essential subunit of Sec63 complex"
species:4932 "Saccharomyces cerevisiae" [GO:0016020 "membrane"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA;TAS] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0031207 "Sec62/Sec63 complex"
evidence=IPI] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA;TAS] [GO:0016021 "integral to membrane"
evidence=ISM;IEA] [GO:0030176 "integral to endoplasmic reticulum
membrane" evidence=IEA] [GO:0031204 "posttranslational protein
targeting to membrane, translocation" evidence=IDA]
InterPro:IPR004728 InterPro:IPR011553 Pfam:PF03839 SGD:S000006015
GO:GO:0016021 GO:GO:0008565 EMBL:BK006949 GO:GO:0030176 EMBL:U43281
GO:GO:0031204 eggNOG:COG5232 KO:K12275 PANTHER:PTHR12443
TIGRFAMs:TIGR00869 GeneTree:ENSGT00390000002757 OMA:NLFEDCG
OrthoDB:EOG40S3R3 GO:GO:0031207 EMBL:X51666 PIR:A33617
RefSeq:NP_015231.2 ProteinModelPortal:P21825 DIP:DIP-3827N
IntAct:P21825 MINT:MINT-495147 STRING:P21825 TCDB:1.A.15.1.1
PaxDb:P21825 DNASU:856011 EnsemblFungi:YPL094C GeneID:856011
KEGG:sce:YPL094C CYGD:YPL094c HOGENOM:HOG000248588 NextBio:980899
Genevestigator:P21825 GermOnline:YPL094C Uniprot:P21825
Length = 274
Score = 113 (44.8 bits), Expect = 0.00049, P = 0.00049
Identities = 46/215 (21%), Positives = 94/215 (43%)
Query: 46 AEKVRDHKDLESRWAVLQETRVEYFRGKDFVSFLRNH---------PEVKDILESDR--- 93
A +R+HK+L+ R + Q + ++FR K FV L + PE+ + S++
Sbjct: 23 ATLLRNHKELKQRQGLFQAKQTDFFRYKRFVRALHSEEYANKSARQPEIYPTIPSNKIED 82
Query: 94 NLETEDIANALLSKNLLVRCDRV--VKTLRPGKKKLSTWPAHLEIFPEQVFSDNDAFFAW 151
L++ +I L+ +++ ++ + G K +P HL I + + D +F W
Sbjct: 83 QLKSREIFIQLIKAQMVIPVKKLHSQECKEHGLKPSKDFP-HL-IVSNKAQLEADEYFVW 140
Query: 152 TFEKGRPLWQTLLSFFWPVLTLAICLFPVYPH---RCKLLILYSCAGVXXXXXXXXFVRA 208
+ R L+ + LA+ +P++P R + G+ +R
Sbjct: 141 NYNP-RTYMDYLIVIGVVSIILALVCYPLWPRSMRRGSYYVSLGAFGILAGFFAVAILRL 199
Query: 209 AIFGMIWILLGKRV---WFFPNILAEEATLRELFR 240
++ ++ +++ K V W FPN+ E+ + E F+
Sbjct: 200 ILY-VLSLIVYKDVGGFWIFPNLF-EDCGVLESFK 232
>CGD|CAL0001383 [details] [associations]
symbol:SEC62 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0031207 "Sec62/Sec63 complex"
evidence=IEA] [GO:0031204 "posttranslational protein targeting to
membrane, translocation" evidence=IEA] InterPro:IPR004728
InterPro:IPR011553 Pfam:PF03839 CGD:CAL0001383 GO:GO:0005886
EMBL:AACQ01000017 EMBL:AACQ01000015 GO:GO:0008565 GO:GO:0030176
RefSeq:XP_721258.1 RefSeq:XP_721529.1 STRING:Q5AI21 GeneID:3636860
GeneID:3637124 KEGG:cal:CaO19.10549 KEGG:cal:CaO19.3031
eggNOG:COG5232 KO:K12275 PANTHER:PTHR12443 TIGRFAMs:TIGR00869
Uniprot:Q5AI21
Length = 293
Score = 113 (44.8 bits), Expect = 0.00056, P = 0.00056
Identities = 51/205 (24%), Positives = 88/205 (42%)
Query: 55 LESRWAVLQETR-VEYFRGKDFVSFLRNHPEVKDILESDRN-----LETEDIANA--LLS 106
L+ R +L T +E+FR K L + + K ++ +N ED+ LL
Sbjct: 37 LKQRTGLLDNTNDIEFFRFKRLQRALLSD-DYKQKQQNPKNGLIPVANNEDVQKVFVLLI 95
Query: 107 KN-LLVRCDRV-------VKTLRPGKKKLSTWPAHLEIFPEQVFSDNDAFFAWTFEKGRP 158
+N LL+ ++ VK +P K+K + A ++ D D ++ W ++K P
Sbjct: 96 QNQLLLPLQKLHYAEVKAVKGWKPNKEKPTLKRA------DKAVMDPDVYYGWLYQKPNP 149
Query: 159 LWQTLLSFFWPVLTLAICLFPVYPHRCKLLILY---SCAGVXXXXXXXXFVRAAIFGMIW 215
+ L SF A+ LFP++P+ K + Y G+ VR I+ +
Sbjct: 150 -YILLYSFLAIAGVFAVILFPLWPNFMKRGVWYLSMGALGLIALFFATAIVRLIIYIISL 208
Query: 216 ILLGKRVWFFPNILAEEATLRELFR 240
+ K W FPN+ E+ + E F+
Sbjct: 209 VAFPKPFWLFPNLF-EDCGVIESFQ 232
>UNIPROTKB|Q5AI21 [details] [associations]
symbol:SEC62 "Translocation protein SEC62" species:237561
"Candida albicans SC5314" [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR004728 InterPro:IPR011553 Pfam:PF03839
CGD:CAL0001383 GO:GO:0005886 EMBL:AACQ01000017 EMBL:AACQ01000015
GO:GO:0008565 GO:GO:0030176 RefSeq:XP_721258.1 RefSeq:XP_721529.1
STRING:Q5AI21 GeneID:3636860 GeneID:3637124 KEGG:cal:CaO19.10549
KEGG:cal:CaO19.3031 eggNOG:COG5232 KO:K12275 PANTHER:PTHR12443
TIGRFAMs:TIGR00869 Uniprot:Q5AI21
Length = 293
Score = 113 (44.8 bits), Expect = 0.00056, P = 0.00056
Identities = 51/205 (24%), Positives = 88/205 (42%)
Query: 55 LESRWAVLQETR-VEYFRGKDFVSFLRNHPEVKDILESDRN-----LETEDIANA--LLS 106
L+ R +L T +E+FR K L + + K ++ +N ED+ LL
Sbjct: 37 LKQRTGLLDNTNDIEFFRFKRLQRALLSD-DYKQKQQNPKNGLIPVANNEDVQKVFVLLI 95
Query: 107 KN-LLVRCDRV-------VKTLRPGKKKLSTWPAHLEIFPEQVFSDNDAFFAWTFEKGRP 158
+N LL+ ++ VK +P K+K + A ++ D D ++ W ++K P
Sbjct: 96 QNQLLLPLQKLHYAEVKAVKGWKPNKEKPTLKRA------DKAVMDPDVYYGWLYQKPNP 149
Query: 159 LWQTLLSFFWPVLTLAICLFPVYPHRCKLLILY---SCAGVXXXXXXXXFVRAAIFGMIW 215
+ L SF A+ LFP++P+ K + Y G+ VR I+ +
Sbjct: 150 -YILLYSFLAIAGVFAVILFPLWPNFMKRGVWYLSMGALGLIALFFATAIVRLIIYIISL 208
Query: 216 ILLGKRVWFFPNILAEEATLRELFR 240
+ K W FPN+ E+ + E F+
Sbjct: 209 VAFPKPFWLFPNLF-EDCGVIESFQ 232
>RGD|1308862 [details] [associations]
symbol:Sec62 "SEC62 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISO] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA;ISO] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IEA;ISO] InterPro:IPR004728
Pfam:PF03839 RGD:1308862 GO:GO:0005783 GO:GO:0016021 GO:GO:0008565
GO:GO:0045111 GO:GO:0016235 KO:K12275 PANTHER:PTHR12443 CTD:7095
GeneTree:ENSGT00390000002757 HOVERGEN:HBG055550 EMBL:AY325207
IPI:IPI00382218 RefSeq:NP_001029301.1 UniGene:Rn.220192
STRING:Q7TP42 Ensembl:ENSRNOT00000012240 GeneID:294912
KEGG:rno:294912 UCSC:RGD:1308862 HOGENOM:HOG000203990
InParanoid:Q7TP42 NextBio:638701 Genevestigator:Q7TP42
Uniprot:Q7TP42
Length = 605
Score = 118 (46.6 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 31/117 (26%), Positives = 52/117 (44%)
Query: 122 PG--KKKLSTWPAHLEIFPEQVFSDNDAFFAWTFEKGRPLWQTLLSFFWPVLTLAICLFP 179
PG KKK + LE +QVF D + F W ++ + ++ + +A LFP
Sbjct: 363 PGTPKKKETKKKFKLEPHDDQVFLDGNEVFVWIYDPVH-IKTFVMGLILVIAVIAATLFP 421
Query: 180 VYPHRCKLLILYSCAGVX---XXXXXXXFVRAAIFGMIWILLGKR--VWFFPNILAE 231
++P ++ + Y G R +F +IW++ G R WF PN+ A+
Sbjct: 422 LWPAEMRVGVYYLSVGAGCFVASILLLAIARCILFLIIWLITGGRHHFWFLPNLTAD 478
Score = 41 (19.5 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 7/37 (18%), Positives = 18/37 (48%)
Query: 3 KSGAAEKKRVRRSSAVVQNGTRDPNSDTPPRKQAAKK 39
K +K++ ++ ++ ++ TP +K+ KK
Sbjct: 338 KEEKTKKEKEKKKDGEKEDSKKEETPGTPKKKETKKK 374
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.426 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 356 327 0.00088 116 3 11 22 0.36 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 625 (66 KB)
Total size of DFA: 246 KB (2131 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.22u 0.13s 25.35t Elapsed: 00:00:01
Total cpu time: 25.22u 0.13s 25.35t Elapsed: 00:00:01
Start: Sat May 11 13:25:04 2013 End: Sat May 11 13:25:05 2013