Your job contains 1 sequence.
>018429
MSPSSGINSNGGANGWNYIEHQVSKMDTLAGVAIKYGVEVADIKRLNGLATDLQMFALKT
LHIPLPGRHPPSPSLSDGSSSSGENSMERTPPRLGYSNILQSLESLRTESSKKGSLATGT
SQKVSSAMSNLQKYYGLRSPNGKGKDEGTEMAVYRTGSSGHFDNGLFPKASPVSHPFANL
IHKSKSLVNGFLHENGATDDYVPLAEAGEGEGEKSNEKSVRRRQKAEADSRVGTPERLLK
EENSGGSSGFSPATGKGLAMRPKSASRTSTSDSESGWLSSIPVGLGDSIMTDGPVGFRKS
SSTPSFIDQDSSSSSIWPTSKWSLKPDLQALSTVAITRPIFDGLPKPSRRGKAALD
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018429
(356 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2181539 - symbol:AT5G08200 "AT5G08200" species... 505 2.3e-48 1
TAIR|locus:2178272 - symbol:AT5G23130 "AT5G23130" species... 501 6.0e-48 1
RGD|1561865 - symbol:Lysmd1 "LysM, putative peptidoglycan... 134 6.3e-07 1
UNIPROTKB|A0JNI1 - symbol:LYSMD1 "LysM and putative pepti... 131 1.4e-06 1
DICTYBASE|DDB_G0292322 - symbol:DDB_G0292322 "peptidoglyc... 134 1.5e-06 1
UNIPROTKB|E1BT57 - symbol:LYSMD2 "Uncharacterized protein... 124 4.7e-06 1
UNIPROTKB|F1MNB9 - symbol:LYSMD1 "LysM and putative pepti... 125 7.7e-06 1
UNIPROTKB|E2RD13 - symbol:LYSMD1 "Uncharacterized protein... 125 8.0e-06 1
UNIPROTKB|F1SSY1 - symbol:LYSMD1 "Uncharacterized protein... 125 8.0e-06 1
UNIPROTKB|Q96S90 - symbol:LYSMD1 "LysM and putative pepti... 124 1.1e-05 1
UNIPROTKB|Q1JQA8 - symbol:LYSMD2 "LysM and putative pepti... 118 4.6e-05 1
UNIPROTKB|F1RYP8 - symbol:LYSMD2 "Uncharacterized protein... 118 5.2e-05 1
UNIPROTKB|Q8IV50 - symbol:LYSMD2 "LysM and putative pepti... 117 6.1e-05 1
MGI|MGI:1917332 - symbol:Lysmd2 "LysM, putative peptidogl... 116 8.0e-05 1
RGD|1304585 - symbol:Lysmd2 "LysM, putative peptidoglycan... 116 8.0e-05 1
ZFIN|ZDB-GENE-040801-250 - symbol:lysmd2 "LysM, putative ... 112 0.00022 1
ZFIN|ZDB-GENE-040426-1895 - symbol:lysmd4 "LysM, putative... 112 0.00045 1
>TAIR|locus:2181539 [details] [associations]
symbol:AT5G08200 "AT5G08200" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0016998 "cell wall macromolecule
catabolic process" evidence=ISS] EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AY140035 EMBL:BT008509
IPI:IPI00536867 RefSeq:NP_196437.2 UniGene:At.32612
UniGene:At.69044 ProteinModelPortal:Q8L708 PaxDb:Q8L708
PRIDE:Q8L708 EnsemblPlants:AT5G08200.1 GeneID:830716
KEGG:ath:AT5G08200 TAIR:At5g08200 eggNOG:NOG318163
HOGENOM:HOG000242090 InParanoid:Q8L708 OMA:MSSCGQY PhylomeDB:Q8L708
ProtClustDB:CLSN2690192 ArrayExpress:Q8L708 Genevestigator:Q8L708
Uniprot:Q8L708
Length = 409
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 140/352 (39%), Positives = 178/352 (50%)
Query: 18 YIEHQVSKMDTLAGVAIKYGVEVADIKRLNGLATDLQMFALKTLHIPLPGRHXXXXXXXX 77
YIEH++SK DTLAGVAIKYGVEVAD+K++N L TDLQMFALK+L IPLPGRH
Sbjct: 77 YIEHRISKFDTLAGVAIKYGVEVADVKKMNNLVTDLQMFALKSLQIPLPGRHPPSPCLSN 136
Query: 78 XXXXXGENSMERTP--PRLGYSNILQSLESLRTESSKKGSLATGTSQKVSSAMSNLQKYY 135
GE P P + S +SLR +SS+K KVS AM +LQ YY
Sbjct: 137 GSLNHGEGCSCHEPESPNHSEQEVFDSFQSLRLKSSEK---------KVSPAMYSLQGYY 187
Query: 136 GLRSPNGKGKDEGT-EMAVYRTGSSGH-FDNGL--FPKASPVSHPFANLIHKSKSLVNGF 191
GL+ + D G EM Y+T +S H F+NG + + P ++ N KS+SLVN
Sbjct: 188 GLKPADRTVSDGGCFEMGNYKTETSHHIFNNGDNGYLRPFPSTNTPLNHHRKSRSLVNAL 247
Query: 192 LHENGATDDYVPLXXXXXXXXXKSNEKSVRRRQKAEADSRVGTPERLLKEENSGGSSGFS 251
+ E + D +++K +RRRQK+EAD TPE +LKEEN + GF
Sbjct: 248 IEEVNQSPD--------NNTQEPTSDKFMRRRQKSEADFSSRTPELVLKEENGSSNGGFL 299
Query: 252 PATGKGLAMRPKXXXXXXXXXXXX-GWLSSIPVGLGDSIMTDGPVGFRKXXXXXXXXXXX 310
GKGLA+R K G + + + L D+ ++D RK
Sbjct: 300 SIAGKGLALRSKASSRTNLAAESENGNFNPVSMNLMDAPVSDSFSSVRKSSSASSLQDPD 359
Query: 311 XXXXXXXXX----XXXXLKPDLQALSTVAITRPIFDGLPKP--SRRGKAALD 356
LKPDL L+ AIT IFDGLPKP RR K ALD
Sbjct: 360 GNSNNGSLSLWPTSKWSLKPDL--LTPAAITSSIFDGLPKPLTGRRNKTALD 409
>TAIR|locus:2178272 [details] [associations]
symbol:AT5G23130 "AT5G23130" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0016998 "cell wall macromolecule
catabolic process" evidence=IEA;ISS] InterPro:IPR002482
InterPro:IPR018392 Pfam:PF01476 SMART:SM00257 EMBL:CP002688
UniGene:At.28379 GO:GO:0016998 ProtClustDB:CLSN2690192
EMBL:AY070377 EMBL:AY113945 IPI:IPI00522200 RefSeq:NP_197704.2
ProteinModelPortal:Q8VYP8 SMR:Q8VYP8 IntAct:Q8VYP8 PaxDb:Q8VYP8
PRIDE:Q8VYP8 ProMEX:Q8VYP8 EnsemblPlants:AT5G23130.1 GeneID:832377
KEGG:ath:AT5G23130 TAIR:At5g23130 eggNOG:KOG2850 InParanoid:Q8VYP8
OMA:MASSIFD PhylomeDB:Q8VYP8 ArrayExpress:Q8VYP8
Genevestigator:Q8VYP8 Uniprot:Q8VYP8
Length = 397
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 139/347 (40%), Positives = 175/347 (50%)
Query: 18 YIEHQVSKMDTLAGVAIKYGVEVADIKRLNGLATDLQMFALKTLHIPLPGRHXXXXXXXX 77
YIEH+VSK DTLAG+AIKYGVEVADI +LNGL TDLQMFAL++L IPLPGRH
Sbjct: 69 YIEHRVSKFDTLAGIAIKYGVEVADITKLNGLVTDLQMFALESLRIPLPGRHPPSPCLSN 128
Query: 78 XXXXXGENSMERTPPRLGYSN---ILQSLESLRTESSKKGSLATGTSQKVSSAMSNLQKY 134
GE+ E+ N + S +SLR S+K K+S AM++LQ Y
Sbjct: 129 GSLNHGEDWSEQASSSASNGNHQDVFDSFQSLRLNHSEK---------KISPAMNSLQGY 179
Query: 135 YGLRSPNGKGKDEGTEMAVYRTGSSGHFDNGLFPKASPV-SHPFANLIHKSKSLVNGFLH 193
YGL+ P + EG MAVY+ +S DN + P S P ++ KS+SLV+ +
Sbjct: 180 YGLK-PKNRRASEGFGMAVYKNEASQLQDNDQYLTPFPATSTPLSHH-RKSRSLVDAVIA 237
Query: 194 ENGATDDYVPLXXXXXXXXXKSNEKSVRRRQKAEADSRVGTPERLLKEENSGGSSGFSPA 253
E + P S +K +RRRQK+EAD PE LLKEEN S FS
Sbjct: 238 EVNQS----PNPSKAGGGEVNSTDKPMRRRQKSEADFSSRAPELLLKEENRSSSGAFSAI 293
Query: 254 TGKGLAMRPKXXXXXXXXXXXXGWLSSIPVGLGDSIMTDGPVGFRKXXXXXXXXXXXXXX 313
GK LA+R K L+SIP+ L D+ + D RK
Sbjct: 294 AGKNLALRSKASSRANLSAETRH-LNSIPINLMDAPVGDSFSSVRKSVSASSLQEPNCNS 352
Query: 314 XXXXX--XXXXXLKPDLQALSTVAITRPIFDGLPKP--SRRGKAALD 356
LKP+L L+ VA+ IFDGLPKP RR K A+D
Sbjct: 353 NGSSLWPTSKWTLKPEL--LTQVAMASSIFDGLPKPLTGRRNKKAVD 397
>RGD|1561865 [details] [associations]
symbol:Lysmd1 "LysM, putative peptidoglycan-binding, domain
containing 1" species:10116 "Rattus norvegicus" [GO:0016998 "cell
wall macromolecule catabolic process" evidence=IEA]
InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476 SMART:SM00257
RGD:1561865 GO:GO:0016998 CTD:388695 eggNOG:NOG44631
HOGENOM:HOG000290644 HOVERGEN:HBG079723 OrthoDB:EOG43N7DW
OMA:RMQQRAV EMBL:BC089113 EMBL:BC092612 IPI:IPI00208008
RefSeq:NP_001019473.1 UniGene:Rn.160047 ProteinModelPortal:Q5HZA4
SMR:Q5HZA4 PhosphoSite:Q5HZA4 Ensembl:ENSRNOT00000028640
GeneID:499671 KEGG:rno:499671 UCSC:RGD:1561865
GeneTree:ENSGT00520000055632 InParanoid:Q5HZA4 NextBio:703646
Genevestigator:Q5HZA4 GermOnline:ENSRNOG00000021099 Uniprot:Q5HZA4
Length = 227
Score = 134 (52.2 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 51/162 (31%), Positives = 71/162 (43%)
Query: 19 IEHQVSKMDTLAGVAIKYGVEVADIKRLNGLATDLQMFALKTLHIPL--PGRHXXXXXXX 76
+EHQ+ DTLAG+A+KYGV + IKR N L T+ +F KTL+IP+ R
Sbjct: 40 LEHQLEPGDTLAGLALKYGVTMEQIKRTNRLYTNDSIFLKKTLYIPILTEPRDLFNGLDS 99
Query: 77 XXXXXXGENSMERTPPRLGYSNILQSLESLRTESSKKGSL----ATGTSQKVSSAMSNLQ 132
GE + + +G S+ + + + K L T T SA L+
Sbjct: 100 EEEENDGEEEVRPSKDEIGSSSGKRKNQGSASSQPKGTGLPPHQGTSTPSHDLSASDFLK 159
Query: 133 KYYGLRSPNGKGKDEGTEMAVYRTGSSG--HFDNGLFPKASP 172
K L S K + R G SG D GL+P +SP
Sbjct: 160 K---LDSQISLSKKAAAQKL--RKGESGVPEEDTGLYP-SSP 195
>UNIPROTKB|A0JNI1 [details] [associations]
symbol:LYSMD1 "LysM and putative peptidoglycan-binding
domain-containing protein 1" species:9913 "Bos taurus" [GO:0016998
"cell wall macromolecule catabolic process" evidence=IEA]
InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476 SMART:SM00257
GO:GO:0016998 EMBL:BC126694 IPI:IPI00824412 RefSeq:NP_001071366.1
UniGene:Bt.58596 ProteinModelPortal:A0JNI1 SMR:A0JNI1 PRIDE:A0JNI1
GeneID:510653 KEGG:bta:510653 CTD:388695 eggNOG:NOG44631
HOGENOM:HOG000290644 HOVERGEN:HBG079723 InParanoid:A0JNI1
OrthoDB:EOG43N7DW NextBio:20869551 Uniprot:A0JNI1
Length = 225
Score = 131 (51.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 26/47 (55%), Positives = 35/47 (74%)
Query: 19 IEHQVSKMDTLAGVAIKYGVEVADIKRLNGLATDLQMFALKTLHIPL 65
+EHQ++ DTLAG+A+KYGV + IKR N L T+ +F KTLHIP+
Sbjct: 40 LEHQLAPGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLHIPI 86
>DICTYBASE|DDB_G0292322 [details] [associations]
symbol:DDB_G0292322 "peptidoglycan-binding LysM
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016998 "cell wall macromolecule catabolic process"
evidence=IEA] InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476
SMART:SM00257 dictyBase:DDB_G0292322 EMBL:AAFI02000189
GO:GO:0016998 RefSeq:XP_629705.2 EnsemblProtists:DDB0267032
GeneID:8628619 KEGG:ddi:DDB_G0292322 OMA:QDSLFIK Uniprot:Q54DD6
Length = 290
Score = 134 (52.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 37/155 (23%), Positives = 70/155 (45%)
Query: 18 YIEHQVSKMDTLAGVAIKYGVEVADIKRLNGLATDLQMFALKTLHIPLPGRHXXXXXXXX 77
Y+ HQ++ DTL G+A+KY V+V DIKRLN + T +F KT+ IP+
Sbjct: 73 YLVHQLTPKDTLQGLALKYNVKVNDIKRLNNMWTQDSLFIKKTILIPIEVSDLVTSENNS 132
Query: 78 XXXXXGENSMERTPPRLGYSNILQ------SLESLRTESSKKGSLATGTSQKVSSAMSNL 131
G NS+ + + N+L + S + ++ + + + ++ N+
Sbjct: 133 NSSGSGNNSLNSSSNNI--KNLLDGSYGVNNTNSFISNNNNNNNRSNNNNNNSGTSFDNV 190
Query: 132 -QKYYGLRSPNGKGKDEGT-EMAVYRTGSSGHFDN 164
++ + G K++ + + GS+G + N
Sbjct: 191 FPEFEKMNKTFGTPKEKPILPPSTFNNGSNGFYSN 225
>UNIPROTKB|E1BT57 [details] [associations]
symbol:LYSMD2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016998 "cell wall macromolecule catabolic
process" evidence=IEA] InterPro:IPR002482 InterPro:IPR018392
Pfam:PF01476 SMART:SM00257 GO:GO:0016998
GeneTree:ENSGT00520000055632 CTD:256586 OMA:QDIEGPS
EMBL:AADN02045354 EMBL:AADN02045355 EMBL:AADN02045356
EMBL:AADN02045357 IPI:IPI00576281 RefSeq:XP_413806.1
UniGene:Gga.15785 Ensembl:ENSGALT00000007573 GeneID:415423
KEGG:gga:415423 NextBio:20819035 ArrayExpress:E1BT57 Uniprot:E1BT57
Length = 195
Score = 124 (48.7 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 18 YIEHQVSKMDTLAGVAIKYGVEVADIKRLNGLATDLQMFALKTLHIPL 65
Y+EH++S DTL G+A+KYGV + IKR N L T+ +F KTL+IP+
Sbjct: 45 YVEHRLSAGDTLQGIALKYGVTMEQIKRANKLFTNDCIFLRKTLNIPV 92
>UNIPROTKB|F1MNB9 [details] [associations]
symbol:LYSMD1 "LysM and putative peptidoglycan-binding
domain-containing protein 1" species:9913 "Bos taurus" [GO:0016998
"cell wall macromolecule catabolic process" evidence=IEA]
InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476 SMART:SM00257
GO:GO:0016998 IPI:IPI00824412 UniGene:Bt.58596 OMA:RMQQRAV
GeneTree:ENSGT00520000055632 EMBL:DAAA02007252
Ensembl:ENSBTAT00000027183 Uniprot:F1MNB9
Length = 225
Score = 125 (49.1 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 25/47 (53%), Positives = 35/47 (74%)
Query: 19 IEHQVSKMDTLAGVAIKYGVEVADIKRLNGLATDLQMFALKTLHIPL 65
+EHQ++ DTLAG+A+KYGV + IKR N L T+ +F KTL+IP+
Sbjct: 40 LEHQLAPGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLYIPI 86
>UNIPROTKB|E2RD13 [details] [associations]
symbol:LYSMD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016998 "cell wall macromolecule catabolic
process" evidence=IEA] InterPro:IPR002482 InterPro:IPR018392
Pfam:PF01476 SMART:SM00257 GO:GO:0016998 CTD:388695 OMA:RMQQRAV
GeneTree:ENSGT00520000055632 EMBL:AAEX03011056 RefSeq:XP_851253.1
ProteinModelPortal:E2RD13 Ensembl:ENSCAFT00000019829 GeneID:608985
KEGG:cfa:608985 NextBio:20894605 Uniprot:E2RD13
Length = 227
Score = 125 (49.1 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 25/47 (53%), Positives = 35/47 (74%)
Query: 19 IEHQVSKMDTLAGVAIKYGVEVADIKRLNGLATDLQMFALKTLHIPL 65
+EHQ++ DTLAG+A+KYGV + IKR N L T+ +F KTL+IP+
Sbjct: 40 LEHQLAPGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLYIPI 86
>UNIPROTKB|F1SSY1 [details] [associations]
symbol:LYSMD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016998 "cell wall macromolecule catabolic process"
evidence=IEA] InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476
SMART:SM00257 GO:GO:0016998 CTD:388695 OMA:RMQQRAV
GeneTree:ENSGT00520000055632 EMBL:CU138569 RefSeq:NP_001230430.1
UniGene:Ssc.3652 Ensembl:ENSSSCT00000029303 GeneID:100154705
KEGG:ssc:100154705 Uniprot:F1SSY1
Length = 227
Score = 125 (49.1 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 25/47 (53%), Positives = 35/47 (74%)
Query: 19 IEHQVSKMDTLAGVAIKYGVEVADIKRLNGLATDLQMFALKTLHIPL 65
+EHQ++ DTLAG+A+KYGV + IKR N L T+ +F KTL+IP+
Sbjct: 40 LEHQLAPGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLYIPI 86
>UNIPROTKB|Q96S90 [details] [associations]
symbol:LYSMD1 "LysM and putative peptidoglycan-binding
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0016998 "cell wall macromolecule catabolic process"
evidence=IEA] InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476
SMART:SM00257 GO:GO:0016998 EMBL:AL592424 CTD:388695
eggNOG:NOG44631 HOGENOM:HOG000290644 HOVERGEN:HBG079723
OrthoDB:EOG43N7DW EMBL:AY037156 EMBL:AK298706 EMBL:AL122088
EMBL:BX647911 EMBL:BC031649 IPI:IPI00045531 IPI:IPI00909116
RefSeq:NP_001130015.1 RefSeq:NP_997716.1 UniGene:Hs.591482 PDB:2DJP
PDBsum:2DJP ProteinModelPortal:Q96S90 SMR:Q96S90 PhosphoSite:Q96S90
DMDM:74752122 PRIDE:Q96S90 DNASU:388695 Ensembl:ENST00000368908
Ensembl:ENST00000440902 GeneID:388695 KEGG:hsa:388695
UCSC:uc001ewy.3 UCSC:uc010pcr.2 GeneCards:GC01M151132
HGNC:HGNC:32070 HPA:HPA028055 neXtProt:NX_Q96S90
PharmGKB:PA142671493 InParanoid:Q96S90 OMA:RMQQRAV PhylomeDB:Q96S90
EvolutionaryTrace:Q96S90 GenomeRNAi:388695 NextBio:102288
Bgee:Q96S90 CleanEx:HS_LYSMD1 Genevestigator:Q96S90
GermOnline:ENSG00000163155 Uniprot:Q96S90
Length = 227
Score = 124 (48.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 19 IEHQVSKMDTLAGVAIKYGVEVADIKRLNGLATDLQMFALKTLHIPL 65
+EHQ+ DTLAG+A+KYGV + IKR N L T+ +F KTL+IP+
Sbjct: 40 LEHQLEPGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLYIPI 86
>UNIPROTKB|Q1JQA8 [details] [associations]
symbol:LYSMD2 "LysM and putative peptidoglycan-binding
domain-containing protein 2" species:9913 "Bos taurus" [GO:0016998
"cell wall macromolecule catabolic process" evidence=IEA]
InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476 SMART:SM00257
GO:GO:0016998 HOGENOM:HOG000290644 HOVERGEN:HBG079723
GeneTree:ENSGT00520000055632 EMBL:BC116100 IPI:IPI00707636
RefSeq:NP_001068953.1 UniGene:Bt.18507 ProteinModelPortal:Q1JQA8
SMR:Q1JQA8 PRIDE:Q1JQA8 Ensembl:ENSBTAT00000023518 GeneID:511013
KEGG:bta:511013 CTD:256586 eggNOG:NOG25663 InParanoid:Q1JQA8
OMA:QDIEGPS OrthoDB:EOG4F4SC5 NextBio:20869727 Uniprot:Q1JQA8
Length = 215
Score = 118 (46.6 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 18 YIEHQVSKMDTLAGVAIKYGVEVADIKRLNGLATDLQMFALKTLHIPL 65
++EH+V DTL G+A+KYGV + IKR N L T+ +F KTL+IP+
Sbjct: 71 HVEHRVRAGDTLQGIALKYGVSMEQIKRANKLFTNDCIFLKKTLNIPV 118
>UNIPROTKB|F1RYP8 [details] [associations]
symbol:LYSMD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016998 "cell wall macromolecule catabolic process"
evidence=IEA] InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476
SMART:SM00257 GO:GO:0016998 GeneTree:ENSGT00520000055632 CTD:256586
OMA:QDIEGPS EMBL:CU019579 RefSeq:XP_001925770.1 UniGene:Ssc.62894
Ensembl:ENSSSCT00000005112 GeneID:100155966 KEGG:ssc:100155966
Uniprot:F1RYP8
Length = 221
Score = 118 (46.6 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 18 YIEHQVSKMDTLAGVAIKYGVEVADIKRLNGLATDLQMFALKTLHIPL 65
++EH+V DTL G+A+KYGV + IKR N L T+ +F KTL+IP+
Sbjct: 76 HVEHRVRAGDTLQGIALKYGVSMEQIKRANKLFTNDCIFLKKTLNIPV 123
>UNIPROTKB|Q8IV50 [details] [associations]
symbol:LYSMD2 "LysM and putative peptidoglycan-binding
domain-containing protein 2" species:9606 "Homo sapiens"
[GO:0016998 "cell wall macromolecule catabolic process"
evidence=IEA] InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476
SMART:SM00257 GO:GO:0016998 HOGENOM:HOG000290644 HOVERGEN:HBG079723
CTD:256586 eggNOG:NOG25663 OMA:QDIEGPS OrthoDB:EOG4F4SC5
EMBL:AY125955 EMBL:BC022075 EMBL:BC033515 EMBL:CR936638
IPI:IPI00216874 IPI:IPI00784740 RefSeq:NP_001137389.1
RefSeq:NP_699205.1 UniGene:Hs.603629 ProteinModelPortal:Q8IV50
SMR:Q8IV50 PhosphoSite:Q8IV50 DMDM:74728034 PRIDE:Q8IV50
DNASU:256586 Ensembl:ENST00000267838 Ensembl:ENST00000454181
Ensembl:ENST00000560491 GeneID:256586 KEGG:hsa:256586
UCSC:uc002abi.3 GeneCards:GC15M052015 HGNC:HGNC:28571 HPA:HPA040460
neXtProt:NX_Q8IV50 PharmGKB:PA142671494 InParanoid:Q8IV50
PhylomeDB:Q8IV50 GenomeRNAi:256586 NextBio:92836 Bgee:Q8IV50
CleanEx:HS_LYSMD2 Genevestigator:Q8IV50 GermOnline:ENSG00000140280
Uniprot:Q8IV50
Length = 215
Score = 117 (46.2 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 18 YIEHQVSKMDTLAGVAIKYGVEVADIKRLNGLATDLQMFALKTLHIPL 65
++EH+V DTL G+A+KYGV + IKR N L T+ +F KTL+IP+
Sbjct: 70 HVEHRVRAGDTLQGIALKYGVTMEQIKRANKLFTNDCIFLKKTLNIPV 117
>MGI|MGI:1917332 [details] [associations]
symbol:Lysmd2 "LysM, putative peptidoglycan-binding, domain
containing 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016998 "cell wall macromolecule catabolic process"
evidence=IEA] InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476
SMART:SM00257 MGI:MGI:1917332 GO:GO:0016998 HOGENOM:HOG000290644
HOVERGEN:HBG079723 eggNOG:NOG25663 OrthoDB:EOG4F4SC5 EMBL:AK008800
EMBL:BC048545 IPI:IPI00110862 IPI:IPI00785357 UniGene:Mm.19119
ProteinModelPortal:Q9D7V2 SMR:Q9D7V2 PhosphoSite:Q9D7V2
PaxDb:Q9D7V2 PRIDE:Q9D7V2 UCSC:uc009qsq.1 UCSC:uc009qsr.1
InParanoid:Q9D7V2 Genevestigator:Q9D7V2
GermOnline:ENSMUSG00000032184 Uniprot:Q9D7V2
Length = 215
Score = 116 (45.9 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 18 YIEHQVSKMDTLAGVAIKYGVEVADIKRLNGLATDLQMFALKTLHIPL 65
++EH+V DTL G+A+KYGV + IKR N L T+ +F KTL IP+
Sbjct: 70 HVEHRVRAGDTLQGIALKYGVTMEQIKRANKLFTNDCIFLKKTLSIPI 117
>RGD|1304585 [details] [associations]
symbol:Lysmd2 "LysM, putative peptidoglycan-binding, domain
containing 2" species:10116 "Rattus norvegicus" [GO:0016998 "cell
wall macromolecule catabolic process" evidence=IEA]
InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476 SMART:SM00257
RGD:1304585 EMBL:CH473954 GO:GO:0016998
GeneTree:ENSGT00520000055632 OMA:QDIEGPS UniGene:Rn.7432
Ensembl:ENSRNOT00000014301 Uniprot:G3V7F2
Length = 215
Score = 116 (45.9 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 18 YIEHQVSKMDTLAGVAIKYGVEVADIKRLNGLATDLQMFALKTLHIPL 65
++EH+V DTL G+A+KYGV + IKR N L T+ +F KTL IP+
Sbjct: 70 HVEHRVRAGDTLQGIALKYGVTMEQIKRANKLFTNDCIFLKKTLSIPI 117
>ZFIN|ZDB-GENE-040801-250 [details] [associations]
symbol:lysmd2 "LysM, putative
peptidoglycan-binding, domain containing 2" species:7955 "Danio
rerio" [GO:0016998 "cell wall macromolecule catabolic process"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR002482
InterPro:IPR018392 Pfam:PF01476 SMART:SM00257
ZFIN:ZDB-GENE-040801-250 GO:GO:0016998 HOGENOM:HOG000290644
HOVERGEN:HBG079723 GeneTree:ENSGT00520000055632 CTD:256586
EMBL:BX927313 EMBL:BC077165 IPI:IPI00500081 RefSeq:NP_001003507.1
UniGene:Dr.150715 ProteinModelPortal:Q6DEF4 SMR:Q6DEF4
Ensembl:ENSDART00000127955 GeneID:445113 KEGG:dre:445113
InParanoid:A3KQQ8 NextBio:20831877 Bgee:Q6DEF4 Uniprot:Q6DEF4
Length = 208
Score = 112 (44.5 bits), Expect = 0.00022, P = 0.00022
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 18 YIEHQVSKMDTLAGVAIKYGVEVADIKRLNGLATDLQMFALKTLHIPL 65
YIEH+V+ +TL G+A+KYGV + IKR+N L ++ +F TL IP+
Sbjct: 64 YIEHRVTDGETLQGIALKYGVTMEQIKRVNKLFSNDCIFLRNTLSIPV 111
>ZFIN|ZDB-GENE-040426-1895 [details] [associations]
symbol:lysmd4 "LysM, putative
peptidoglycan-binding, domain containing 4" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] ZFIN:ZDB-GENE-040426-1895 GO:GO:0016021
HOGENOM:HOG000237338 GeneTree:ENSGT00530000063803 EMBL:BX649426
EMBL:CR925803 EMBL:CU570785 EMBL:BC062528 IPI:IPI00493611
RefSeq:NP_957144.2 UniGene:Dr.154406 UniGene:Dr.77739
Ensembl:ENSDART00000099463 GeneID:100149102 KEGG:dre:100149102
CTD:145748 eggNOG:NOG329041 HOVERGEN:HBG108111 InParanoid:Q6P606
OMA:IKRVNNF OrthoDB:EOG4RNB94 NextBio:20792727 Bgee:Q6P606
Uniprot:Q6P606
Length = 267
Score = 112 (44.5 bits), Expect = 0.00045, P = 0.00045
Identities = 21/47 (44%), Positives = 34/47 (72%)
Query: 19 IEHQVSKMDTLAGVAIKYGVEVADIKRLNGLATDLQMFALKTLHIPL 65
+E +S D L+ +A++YG +VADIKR+N L + M+ALK++ IP+
Sbjct: 70 LERDISHEDNLSKLALQYGCKVADIKRVNNLFQEQDMYALKSIKIPV 116
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.131 0.373 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 356 282 0.00083 115 3 11 23 0.44 34
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 574 (61 KB)
Total size of DFA: 166 KB (2099 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.30u 0.13s 22.43t Elapsed: 00:00:01
Total cpu time: 22.30u 0.13s 22.43t Elapsed: 00:00:01
Start: Sat May 11 13:25:53 2013 End: Sat May 11 13:25:54 2013