Query 018432
Match_columns 356
No_of_seqs 293 out of 1394
Neff 5.6
Searched_HMMs 13730
Date Mon Mar 25 15:11:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018432.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018432hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2g45a1 g.44.1.5 (A:173-285) U 99.8 2.2E-21 1.6E-25 160.8 7.9 80 193-279 6-96 (113)
2 d2uzga1 g.44.1.5 (A:36-130) Ub 99.8 9.1E-21 6.6E-25 152.6 6.1 63 217-279 22-87 (95)
3 d2idaa1 g.44.1.5 (A:1-102) Hyp 99.7 4.5E-19 3.2E-23 144.3 5.9 68 215-282 15-89 (102)
4 d1iyma_ g.44.1.1 (A:) EL5 RING 99.0 5.1E-11 3.7E-15 85.6 4.1 49 164-212 2-52 (55)
5 d1ur6b_ g.44.1.1 (B:) Not-4 N- 98.8 3E-10 2.2E-14 80.4 1.8 45 169-213 2-49 (52)
6 d1chca_ g.44.1.1 (A:) Immediat 98.7 2E-09 1.5E-13 79.9 2.6 45 166-213 4-50 (68)
7 d1g25a_ g.44.1.1 (A:) TFIIH Ma 98.6 3.6E-09 2.6E-13 78.0 2.3 48 166-213 2-53 (65)
8 d3dplr1 g.44.1.1 (R:19-106) RI 98.6 1.4E-08 1E-12 78.9 3.4 47 166-212 20-82 (88)
9 d1jm7b_ g.44.1.1 (B:) bard1 RI 98.5 2.8E-08 2.1E-12 78.1 3.1 46 165-213 20-65 (97)
10 d1v87a_ g.44.1.1 (A:) Deltex p 98.5 1.8E-08 1.3E-12 81.2 1.8 47 167-213 25-92 (114)
11 d1fbva4 g.44.1.1 (A:356-434) C 98.5 2.6E-08 1.9E-12 76.0 2.6 44 167-214 23-69 (79)
12 d1bora_ g.44.1.1 (A:) Acute pr 98.3 1.2E-07 8.5E-12 68.0 3.6 43 166-213 5-47 (56)
13 d1jm7a_ g.44.1.1 (A:) brca1 RI 98.2 2.3E-07 1.7E-11 73.5 2.8 44 166-213 20-68 (103)
14 d1vyxa_ g.44.1.3 (A:) IE1B pro 98.2 1.9E-07 1.4E-11 67.1 1.5 46 165-212 4-56 (60)
15 d1rmda2 g.44.1.1 (A:1-86) V(D) 98.2 3E-07 2.2E-11 71.4 2.3 44 166-213 22-68 (86)
16 d2baya1 g.44.1.2 (A:1-56) Pre- 98.1 2.7E-07 2E-11 65.7 1.5 42 169-213 2-45 (56)
17 d2c2la2 g.44.1.2 (A:225-304) S 97.8 3.9E-06 2.8E-10 63.3 2.8 43 167-213 7-52 (80)
18 d1t1ha_ g.44.1.2 (A:) E3 ubiqu 97.7 9.7E-06 7E-10 60.7 3.2 45 165-213 6-53 (78)
19 d1wima_ g.44.1.1 (A:) UbcM4-in 97.1 8E-05 5.8E-09 57.1 1.9 37 165-202 3-39 (94)
20 d1wgma_ g.44.1.2 (A:) Ubiquiti 96.8 0.00025 1.8E-08 55.3 2.6 43 167-213 22-67 (98)
21 d1b7fa2 d.58.7.1 (A:205-289) S 96.5 0.011 8E-07 43.5 9.8 71 64-135 5-76 (85)
22 d2cqca1 d.58.7.1 (A:109-191) A 96.4 0.0068 4.9E-07 44.5 8.3 69 65-134 9-78 (83)
23 d1fxla2 d.58.7.1 (A:119-203) H 96.4 0.01 7.6E-07 43.8 9.5 70 64-134 5-75 (85)
24 d1fxla1 d.58.7.1 (A:37-118) Hu 96.4 0.0086 6.2E-07 43.6 8.6 68 66-134 3-71 (82)
25 d1rk8a_ d.58.7.1 (A:) RNA-bind 96.3 0.013 9.2E-07 43.6 9.5 69 64-133 6-75 (88)
26 d1x5oa1 d.58.7.1 (A:8-108) RNA 96.3 0.018 1.3E-06 43.9 10.5 71 63-134 16-86 (101)
27 d1b7fa1 d.58.7.1 (A:123-204) S 96.2 0.0061 4.5E-07 44.5 7.1 69 65-134 2-71 (82)
28 d2b0ga1 d.58.7.1 (A:1-83) Spli 96.2 0.012 8.8E-07 43.2 8.5 64 65-133 8-71 (83)
29 d2ghpa2 d.58.7.1 (A:41-115) U4 96.1 0.016 1.2E-06 41.9 9.0 67 66-135 1-67 (75)
30 d2cqpa1 d.58.7.1 (A:917-1002) 96.0 0.0083 6.1E-07 44.2 7.0 70 65-134 9-78 (86)
31 d2f9da1 d.58.7.1 (A:12-125) Pr 96.0 0.015 1.1E-06 44.9 8.8 71 61-134 3-73 (114)
32 d2cqia1 d.58.7.1 (A:1-90) Nucl 95.9 0.015 1.1E-06 43.3 8.1 69 64-134 7-75 (90)
33 d1cvja1 d.58.7.1 (A:11-90) Pol 95.9 0.02 1.4E-06 41.7 8.4 67 67-134 2-69 (80)
34 d1wi8a_ d.58.7.1 (A:) Eukaryot 95.8 0.023 1.7E-06 43.1 9.0 72 60-134 10-83 (104)
35 d2cq3a1 d.58.7.1 (A:110-202) R 95.7 0.044 3.2E-06 40.9 10.0 69 64-134 10-78 (93)
36 d1zh5a2 d.58.7.1 (A:105-189) L 95.6 0.025 1.8E-06 41.7 8.3 68 65-134 6-73 (85)
37 d2adca1 d.58.7.1 (A:335-443) P 95.6 0.018 1.3E-06 44.0 7.5 65 65-134 2-67 (109)
38 d1wg4a_ d.58.7.1 (A:) Splicing 95.6 0.032 2.3E-06 42.4 8.9 65 64-135 14-78 (98)
39 d1whya_ d.58.7.1 (A:) Putative 95.6 0.017 1.3E-06 43.6 7.3 64 65-134 17-80 (97)
40 d1x5ua1 d.58.7.1 (A:7-99) Spli 95.5 0.034 2.5E-06 41.6 8.7 69 65-134 9-78 (93)
41 d2cpxa1 d.58.7.1 (A:291-392) R 95.5 0.017 1.3E-06 43.6 7.0 68 65-134 18-87 (102)
42 d1wg5a_ d.58.7.1 (A:) Heteroge 95.4 0.053 3.9E-06 41.2 9.7 73 62-135 12-84 (104)
43 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 95.4 0.051 3.7E-06 40.6 9.4 70 64-134 6-76 (93)
44 d1wexa_ d.58.7.1 (A:) Heteroge 95.4 0.043 3.2E-06 41.8 9.1 64 63-132 13-76 (104)
45 d2u2fa_ d.58.7.1 (A:) Splicing 95.3 0.035 2.5E-06 40.9 8.1 67 68-135 4-71 (85)
46 d1no8a_ d.58.7.1 (A:) Nuclear 95.3 0.028 2E-06 40.7 7.4 66 68-134 3-68 (78)
47 d1p1ta_ d.58.7.1 (A:) Cleavage 95.1 0.033 2.4E-06 42.3 7.6 68 66-134 9-77 (104)
48 d1x4ga1 d.58.7.1 (A:8-103) Nuc 95.1 0.04 2.9E-06 41.6 8.0 65 64-134 17-81 (96)
49 d2ghpa1 d.58.7.1 (A:116-196) U 95.1 0.023 1.7E-06 41.2 6.3 68 66-134 2-70 (81)
50 d1x4aa1 d.58.7.1 (A:9-103) Spl 95.0 0.055 4E-06 40.5 8.4 67 65-134 14-80 (95)
51 d2disa1 d.58.7.1 (A:8-103) Hyp 94.9 0.035 2.6E-06 41.6 7.2 67 67-133 3-71 (96)
52 d1cvja2 d.58.7.1 (A:91-179) Po 94.9 0.03 2.2E-06 41.4 6.7 67 66-134 9-75 (89)
53 d1nu4a_ d.58.7.1 (A:) Spliceso 94.9 0.011 7.9E-07 44.2 4.1 68 65-134 3-73 (91)
54 d2cpfa1 d.58.7.1 (A:362-446) P 94.9 0.052 3.8E-06 39.5 7.9 66 68-134 1-70 (85)
55 d1weza_ d.58.7.1 (A:) Heteroge 94.8 0.08 5.8E-06 40.1 9.1 69 64-135 14-82 (102)
56 d2adca2 d.58.7.1 (A:444-531) P 94.8 0.05 3.6E-06 40.0 7.7 65 65-133 10-74 (88)
57 d2cq0a1 d.58.7.1 (A:231-320) E 94.7 0.082 5.9E-06 39.0 8.7 70 64-134 7-77 (90)
58 d2cpja1 d.58.7.1 (A:65-150) No 94.6 0.054 3.9E-06 39.9 7.4 62 67-134 10-71 (86)
59 d2cpea1 d.58.7.1 (A:353-453) R 94.6 0.064 4.6E-06 40.1 7.9 72 63-134 6-85 (101)
60 d2bz2a1 d.58.7.1 (A:35-113) Ne 94.5 0.078 5.7E-06 38.2 8.0 64 64-135 4-67 (79)
61 d1whxa_ d.58.7.1 (A:) Probable 94.4 0.061 4.4E-06 40.8 7.6 64 65-134 10-73 (111)
62 d2cpha1 d.58.7.1 (A:454-547) P 94.4 0.089 6.5E-06 39.3 8.4 70 64-134 7-79 (94)
63 d2cpza1 d.58.7.1 (A:383-484) C 94.4 0.13 9.7E-06 38.8 9.5 69 65-134 18-87 (102)
64 d1x4ea1 d.58.7.1 (A:8-79) RNA- 94.3 0.043 3.1E-06 38.7 6.1 66 68-134 1-67 (72)
65 d2cq1a1 d.58.7.1 (A:51-138) Po 94.2 0.083 6E-06 38.8 7.7 62 64-131 7-68 (88)
66 d1fjca_ d.58.7.1 (A:) Nucleoli 94.2 0.062 4.5E-06 40.2 7.1 67 63-134 14-80 (96)
67 d1whwa_ d.58.7.1 (A:) Probable 94.1 0.11 8.2E-06 38.9 8.4 70 64-134 7-77 (99)
68 d1x5ta1 d.58.7.1 (A:8-90) Spli 93.9 0.065 4.7E-06 38.8 6.5 67 68-134 1-68 (83)
69 d1x5sa1 d.58.7.1 (A:8-97) Cold 93.9 0.12 9E-06 37.8 8.2 69 65-134 5-74 (90)
70 d2cqba1 d.58.7.1 (A:1-89) Pept 93.9 0.049 3.6E-06 40.2 5.9 69 65-134 5-74 (89)
71 d2cpia1 d.58.7.1 (A:101-189) E 93.8 0.096 7E-06 38.7 7.5 70 65-134 8-83 (89)
72 d2ghpa3 d.58.7.1 (A:206-291) U 93.3 0.12 8.9E-06 37.8 7.2 69 64-134 3-74 (86)
73 d2cqga1 d.58.7.1 (A:96-185) TA 93.1 0.24 1.8E-05 36.6 8.7 63 63-126 6-69 (90)
74 d3begb1 d.58.7.1 (B:121-207) S 93.1 0.16 1.1E-05 37.2 7.5 62 68-136 3-64 (87)
75 d1u6fa1 d.58.7.1 (A:1-139) RNA 93.0 0.29 2.1E-05 38.6 9.5 69 65-134 42-111 (139)
76 d2cq4a1 d.58.7.1 (A:132-232) R 92.7 0.19 1.4E-05 38.0 7.8 68 65-134 18-86 (101)
77 d1wi6a1 d.58.7.1 (A:69-143) Ri 92.6 0.25 1.8E-05 35.2 7.9 61 68-135 1-61 (75)
78 d1l3ka1 d.58.7.1 (A:8-91) Nucl 92.6 0.36 2.6E-05 35.0 8.9 68 64-133 5-73 (84)
79 d1uawa_ d.58.7.1 (A:) Musashi- 92.4 0.17 1.2E-05 36.4 6.7 65 68-134 3-68 (77)
80 d1x4ha1 d.58.7.1 (A:8-105) RNA 92.3 0.3 2.1E-05 35.9 8.2 71 62-133 5-76 (98)
81 d2msta_ d.58.7.1 (A:) Neural R 92.2 0.17 1.2E-05 35.5 6.4 65 68-134 2-67 (75)
82 d2cpya1 d.58.7.1 (A:536-638) R 92.1 0.15 1.1E-05 38.3 6.4 69 65-134 8-76 (103)
83 d1wela1 d.58.7.1 (A:412-523) R 91.5 0.39 2.9E-05 36.7 8.4 74 61-135 14-87 (112)
84 d2cpda1 d.58.7.1 (A:223-308) A 90.7 0.59 4.3E-05 33.6 8.3 64 64-133 7-70 (86)
85 d1x4ba1 d.58.7.1 (A:8-110) Het 90.6 0.43 3.1E-05 36.1 7.7 67 65-133 20-87 (103)
86 d1x4fa1 d.58.7.1 (A:8-106) Mat 90.4 0.69 5E-05 34.5 8.7 65 63-133 16-83 (99)
87 d1l3ka2 d.58.7.1 (A:103-181) N 90.1 0.74 5.4E-05 32.4 8.2 67 66-134 3-70 (79)
88 d1wg1a_ d.58.7.1 (A:) Probable 89.9 0.61 4.4E-05 34.0 7.8 63 65-134 5-67 (88)
89 d1uw4a_ d.58.7.4 (A:) RNA proc 89.8 0.54 3.9E-05 35.6 7.5 66 68-134 4-72 (91)
90 d1hd0a_ d.58.7.1 (A:) Heteroge 89.8 0.72 5.2E-05 32.5 7.9 65 68-134 2-67 (75)
91 d2cqda1 d.58.7.1 (A:1-103) RNA 89.8 0.85 6.2E-05 34.1 8.7 64 66-130 11-75 (103)
92 d1u1qa_ d.58.7.1 (A:) Nuclear 89.3 1.8 0.00013 34.6 11.1 68 64-133 96-164 (183)
93 d1fjeb1 d.58.7.1 (B:1-91) Nucl 89.1 0.11 7.9E-06 38.6 2.9 69 64-134 12-80 (91)
94 d1jmta_ d.58.7.3 (A:) d2g45a1 g.44.1.5 (A:173-285) Ubiquitin carboxyl-terminal hydrolase 5, UBP5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=2.2e-21 Score=160.76 Aligned_cols=80 Identities=28% Similarity=0.424 Sum_probs=67.1
Q ss_pred cchhhhhccccccccccccccccCCCCcccccCCCCceeeeccccceeccCCC------CcHHhhhhhhcCCeeeEeCCC
Q 018432 193 FQCSCTAKWTVLSCQVCRFCHQQDERPTCSVCGTVENLWVCLICGFVGCGRYK------EGHAVRHWKDTQHWYSLDLRT 266 (356)
Q Consensus 193 FH~~Cl~kW~~ssCPvCR~~~~~~~~~~C~~C~~~~nlWiCL~CG~vGCgr~~------~~HA~~H~~~t~H~~al~l~t 266 (356)
+|..++.++.+.. ..+++.++|.+|+..+++|+||+||+||||||. ++||++||++|+|++++++.|
T Consensus 6 ~h~~~l~q~~~~~-------~~~p~~~~C~~C~~~~~lWlCL~CG~vgCgR~~~~~~~~~~HA~~H~~~t~H~l~v~l~t 78 (113)
T d2g45a1 6 KHAFSLKQLDNPA-------RIPPCGWKCSKCDMRENLWLNLTDGSILCGRRYFDGSGGNNHAVEHYRETGYPLAVKLGT 78 (113)
T ss_dssp TTTTTCCCCSSCC-------CCCCCBCCCSSSSCCSSEEEETTTCCEEECCBCTTSCBCCSHHHHHHHHHCCCEEEETTC
T ss_pred hhhcchhhccCCc-------cCCCCCCcccCCCCcCCEEEEecCCCCccCcccccCCCCChHHHHHHHhcCCCEEEEecC
Confidence 4555665554321 125678899999999999999999999999985 889999999999999999987
Q ss_pred -----ceEEEccCCceee
Q 018432 267 -----QQIWDYVGDNYVH 279 (356)
Q Consensus 267 -----~~VwcY~cd~yVH 279 (356)
.+||||.||+||.
T Consensus 79 ~~~~~~~vwCY~cd~~V~ 96 (113)
T d2g45a1 79 ITPDGADVYSYDEDDMVL 96 (113)
T ss_dssp CBTTBCCEEETTTTEEEE
T ss_pred CCCCCceEEEecCCCEEE
Confidence 4799999999995
No 2
>d2uzga1 g.44.1.5 (A:36-130) Ubiquitin carboxyl-terminal hydrolase 33, UBP33 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=9.1e-21 Score=152.63 Aligned_cols=63 Identities=35% Similarity=0.814 Sum_probs=59.3
Q ss_pred CCCcccccCCC-Cceeeec--cccceeccCCCCcHHhhhhhhcCCeeeEeCCCceEEEccCCceee
Q 018432 217 ERPTCSVCGTV-ENLWVCL--ICGFVGCGRYKEGHAVRHWKDTQHWYSLDLRTQQIWDYVGDNYVH 279 (356)
Q Consensus 217 ~~~~C~~C~~~-~nlWiCL--~CG~vGCgr~~~~HA~~H~~~t~H~~al~l~t~~VwcY~cd~yVH 279 (356)
..++|.+|+.. +|+|+|| +||++|||||.++||++||++++|+++|++.|.+||||.||+||.
T Consensus 22 ~~~~C~~C~~~~~~lw~CL~~~Cg~vgCgr~~~~Ha~~H~~~~~H~~~~~l~t~~vwCy~Cd~~v~ 87 (95)
T d2uzga1 22 SLGTCQDCKVQGPNLWACLENRCSYVGCGESQVDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVF 87 (95)
T ss_dssp TTTCCSSSCCCCSSCEEECCTTCCCEECCTTTTCHHHHHHHHTTCCEEEETTTTEEEETTTTEEEC
T ss_pred CCCeeecCCCCCCCEEEeccccCCcEEccCCcCcHHHHHHhhhCCCEEEECCCCeEEECCCCCEEE
Confidence 46789999987 5899999 499999999999999999999999999999999999999999996
No 3
>d2idaa1 g.44.1.5 (A:1-102) Hypothetical protein RPA1320 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=99.74 E-value=4.5e-19 Score=144.31 Aligned_cols=68 Identities=26% Similarity=0.531 Sum_probs=59.8
Q ss_pred cCCCCcccccCCCCcee----eeccccceec-cCCCCcHHhhhhhhcCCeeeEeCC--CceEEEccCCceeeccc
Q 018432 215 QDERPTCSVCGTVENLW----VCLICGFVGC-GRYKEGHAVRHWKDTQHWYSLDLR--TQQIWDYVGDNYVHRLN 282 (356)
Q Consensus 215 ~~~~~~C~~C~~~~nlW----iCL~CG~vGC-gr~~~~HA~~H~~~t~H~~al~l~--t~~VwcY~cd~yVHrl~ 282 (356)
++..+.|.+|+..+++| +||+||++|| ||+.++||++||++|+|+++++++ +.+||||+||.||++-.
T Consensus 15 ~p~~~~C~~C~~~~~~W~~L~lCL~CG~vgC~~~~~~~Ha~~H~~~t~Hpl~~sl~~~~~~vwCY~~d~~v~~p~ 89 (102)
T d2idaa1 15 TPSALGCEECLKIGSPWVHLRICRTCGHVGCCDDSPHKHATRHFHATGHPIIEGYDPPEGWGWCYVDEVMFDLSD 89 (102)
T ss_dssp CCSSSSCHHHHTTTCCCSCBEEESSSCCCCBCTTSTTCHHHHHHHHHCCCEEEESSSCSCEEEETTTTEEEECTT
T ss_pred CCCCCCcccccCCCCcccccccccccCCEecCCCCcccHHHHHHHhcCCCeEEEecCCCceEEeecCcceeeCCC
Confidence 34567899999998877 6999999999 578899999999999999988885 67899999999998644
No 4
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]}
Probab=99.05 E-value=5.1e-11 Score=85.61 Aligned_cols=49 Identities=24% Similarity=0.738 Sum_probs=39.4
Q ss_pred CCCCCCCCccccccCCCCcceeeecCCCccchhhhhccc--cccccccccc
Q 018432 164 FTELPTCPICLERLDPDTSGILSTICDHSFQCSCTAKWT--VLSCQVCRFC 212 (356)
Q Consensus 164 ~~elptCpICLe~ld~~~sgilt~~C~H~FH~~Cl~kW~--~ssCPvCR~~ 212 (356)
+.+...|+||++.+..+........|+|.||..|+.+|. +.+||+||+.
T Consensus 2 ~ed~~~C~ICl~~~~~~~~~~~l~~C~H~Fh~~Ci~~Wl~~~~~CP~CR~~ 52 (55)
T d1iyma_ 2 MDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLT 52 (55)
T ss_dssp CCCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCC
T ss_pred CCCCCCCeEECccccCCCEEEEeCCCCCcccHHHHHHHHHhCCcCCCCCCE
Confidence 345668999999998764433334699999999999998 6789999974
No 5
>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.85 E-value=3e-10 Score=80.44 Aligned_cols=45 Identities=24% Similarity=0.518 Sum_probs=37.7
Q ss_pred CCCccccccCCCCcceeeecCCCccchhhhhccc---ccccccccccc
Q 018432 169 TCPICLERLDPDTSGILSTICDHSFQCSCTAKWT---VLSCQVCRFCH 213 (356)
Q Consensus 169 tCpICLe~ld~~~sgilt~~C~H~FH~~Cl~kW~---~ssCPvCR~~~ 213 (356)
.||||++.++.+...+...+|+|.||..|+.+|. +..||+||...
T Consensus 2 eCpICl~~~~~~~~~~~~~~CgH~~c~~C~~~w~~~~~~~CP~CR~~~ 49 (52)
T d1ur6b_ 2 ECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY 49 (52)
T ss_dssp EETTTTEECCGGGTTCCSSSSSCCCCHHHHHHHTTTSCCBCTTTCCBC
T ss_pred CCcCCChhhhCCCceEEecCCCCccchHHHHHHHhhcCCCCCccCCcC
Confidence 5999999998765555667899999999999997 34699999754
No 6
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]}
Probab=98.71 E-value=2e-09 Score=79.86 Aligned_cols=45 Identities=29% Similarity=0.708 Sum_probs=37.8
Q ss_pred CCCCCCccccccCCCCcceeeecCCCccchhhhhccc--ccccccccccc
Q 018432 166 ELPTCPICLERLDPDTSGILSTICDHSFQCSCTAKWT--VLSCQVCRFCH 213 (356)
Q Consensus 166 elptCpICLe~ld~~~sgilt~~C~H~FH~~Cl~kW~--~ssCPvCR~~~ 213 (356)
....||||++.+.+. ...++|+|.||..|+.+|. ..+||+||...
T Consensus 4 ~~d~C~IC~~~~~~~---~~~~~C~H~Fc~~Ci~~w~~~~~~CP~CR~~i 50 (68)
T d1chca_ 4 VAERCPICLEDPSNY---SMALPCLHAFCYVCITRWIRQNPTCPLCKVPV 50 (68)
T ss_dssp CCCCCSSCCSCCCSC---EEETTTTEEESTTHHHHHHHHSCSTTTTCCCC
T ss_pred CCCCCccCCcCccCC---cEEeCCCCcCcHHHHHHHHHhCCcCCCCCcch
Confidence 345799999999753 4668999999999999997 68899999854
No 7
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.65 E-value=3.6e-09 Score=77.95 Aligned_cols=48 Identities=19% Similarity=0.405 Sum_probs=37.3
Q ss_pred CCCCCCccccccCCCC-cceeeecCCCccchhhhhccc---ccccccccccc
Q 018432 166 ELPTCPICLERLDPDT-SGILSTICDHSFQCSCTAKWT---VLSCQVCRFCH 213 (356)
Q Consensus 166 elptCpICLe~ld~~~-sgilt~~C~H~FH~~Cl~kW~---~ssCPvCR~~~ 213 (356)
|..+||||++.+.... ..++..+|+|.||..|+.+|. +..||+||...
T Consensus 2 dd~~CpIC~~~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~~CP~CR~~i 53 (65)
T d1g25a_ 2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPL 53 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCC
T ss_pred CCCCCCcCCceeecCCceEEEeCccChHhhHHHHHHHhCcCcCCCCCCCcCc
Confidence 5679999999764322 234556899999999999996 35799999865
No 8
>d3dplr1 g.44.1.1 (R:19-106) RIGG-box protein 1 (RBX1) of SCF ubiquitin ligase complex {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.56 E-value=1.4e-08 Score=78.91 Aligned_cols=47 Identities=19% Similarity=0.523 Sum_probs=37.1
Q ss_pred CCCCCCccccccCCCCc--------------ceeeecCCCccchhhhhccc--cccccccccc
Q 018432 166 ELPTCPICLERLDPDTS--------------GILSTICDHSFQCSCTAKWT--VLSCQVCRFC 212 (356)
Q Consensus 166 elptCpICLe~ld~~~s--------------gilt~~C~H~FH~~Cl~kW~--~ssCPvCR~~ 212 (356)
....|+||++.+++... .+..++|+|.||..||.+|+ +.+||+||..
T Consensus 20 ~~d~C~IC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~ 82 (88)
T d3dplr1 20 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNRE 82 (88)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSB
T ss_pred CCCcCEEccchhhCccccccccccccccccCCeEEccccCcccHHHHHHHHHHCCcCCCCCCc
Confidence 34569999988776321 24567999999999999998 6889999974
No 9
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.47 E-value=2.8e-08 Score=78.11 Aligned_cols=46 Identities=24% Similarity=0.485 Sum_probs=38.7
Q ss_pred CCCCCCCccccccCCCCcceeeecCCCccchhhhhcccccccccccccc
Q 018432 165 TELPTCPICLERLDPDTSGILSTICDHSFQCSCTAKWTVLSCQVCRFCH 213 (356)
Q Consensus 165 ~elptCpICLe~ld~~~sgilt~~C~H~FH~~Cl~kW~~ssCPvCR~~~ 213 (356)
.+..+||||++.|... +...+|+|+|+..|+.+|....||+||...
T Consensus 20 ~~~l~C~IC~~~~~~p---v~~~~CgH~fC~~Ci~~~~~~~CP~Cr~~~ 65 (97)
T d1jm7b_ 20 EKLLRCSRCTNILREP---VCLGGCEHIFCSNCVSDCIGTGCPVCYTPA 65 (97)
T ss_dssp HHTTSCSSSCSCCSSC---BCCCSSSCCBCTTTGGGGTTTBCSSSCCBC
T ss_pred hhcCCCccCCchhhcC---ceeCCCCCchhHHHHHHHHhccccccCCcC
Confidence 3466999999999864 334589999999999999988999999754
No 10
>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.46 E-value=1.8e-08 Score=81.22 Aligned_cols=47 Identities=28% Similarity=0.520 Sum_probs=36.0
Q ss_pred CCCCCccccccCCCC--------------cceeeecCCCccchhhhhcccc-------cccccccccc
Q 018432 167 LPTCPICLERLDPDT--------------SGILSTICDHSFQCSCTAKWTV-------LSCQVCRFCH 213 (356)
Q Consensus 167 lptCpICLe~ld~~~--------------sgilt~~C~H~FH~~Cl~kW~~-------ssCPvCR~~~ 213 (356)
...|+||++.|.... .-+..++|+|.||..||.+|.. .+||+||...
T Consensus 25 ~~~C~IC~e~l~~~~~~~~~~~~~~~~~~~~~~~~~CgH~FH~~Ci~~Wl~~~~~~~~~~CP~CR~~~ 92 (114)
T d1v87a_ 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIY 92 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBS
T ss_pred cccccchhheecccccccccccccccccccceEECCCCChhhHHHHHHHHHhcCcCCCCccccccchh
Confidence 347999999985421 1234578999999999999973 3799999754
No 11
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.46 E-value=2.6e-08 Score=75.97 Aligned_cols=44 Identities=27% Similarity=0.622 Sum_probs=36.5
Q ss_pred CCCCCccccccCCCCcceeeecCCCccchhhhhccc---cccccccccccc
Q 018432 167 LPTCPICLERLDPDTSGILSTICDHSFQCSCTAKWT---VLSCQVCRFCHQ 214 (356)
Q Consensus 167 lptCpICLe~ld~~~sgilt~~C~H~FH~~Cl~kW~---~ssCPvCR~~~~ 214 (356)
...||||++.+.. .+.++|+|.||..|+.+|. ...||+||....
T Consensus 23 ~~~C~IC~~~~~~----~~~~~CgH~fC~~Ci~~wl~~~~~~CP~Cr~~i~ 69 (79)
T d1fbva4 23 FQLCKICAENDKD----VKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIK 69 (79)
T ss_dssp TTBCTTTSSSBCC----EECSSSCCEECHHHHHHHHHTTCCSCTTTCCCCC
T ss_pred CCCCccCCCcCCC----eEEeCCCCeeeHHHHHHHHHHCcCcCCCCCcCcc
Confidence 4579999998875 4567899999999999996 357999998653
No 12
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.35 E-value=1.2e-07 Score=67.96 Aligned_cols=43 Identities=16% Similarity=0.412 Sum_probs=35.7
Q ss_pred CCCCCCccccccCCCCcceeeecCCCccchhhhhcccccccccccccc
Q 018432 166 ELPTCPICLERLDPDTSGILSTICDHSFQCSCTAKWTVLSCQVCRFCH 213 (356)
Q Consensus 166 elptCpICLe~ld~~~sgilt~~C~H~FH~~Cl~kW~~ssCPvCR~~~ 213 (356)
+.-.|+||++.+.+. +.++|+|.||..|+.+|. ..||+||...
T Consensus 5 ~~l~C~IC~~~~~~p----~~lpCgH~fC~~Ci~~~~-~~CP~Cr~~~ 47 (56)
T d1bora_ 5 QFLRCQQCQAEAKCP----KLLPCLHTLCSGCLEASG-MQCPICQAPW 47 (56)
T ss_dssp CCSSCSSSCSSCBCC----SCSTTSCCSBTTTCSSSS-SSCSSCCSSS
T ss_pred CCCCCcccCcccCCC----EEecCCCHHhHHHHHcCC-CcCcCCCCcc
Confidence 345899999999763 456899999999999995 4799999865
No 13
>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.21 E-value=2.3e-07 Score=73.49 Aligned_cols=44 Identities=36% Similarity=0.705 Sum_probs=36.0
Q ss_pred CCCCCCccccccCCCCcceeeecCCCccchhhhhcccc-----cccccccccc
Q 018432 166 ELPTCPICLERLDPDTSGILSTICDHSFQCSCTAKWTV-----LSCQVCRFCH 213 (356)
Q Consensus 166 elptCpICLe~ld~~~sgilt~~C~H~FH~~Cl~kW~~-----ssCPvCR~~~ 213 (356)
+.-+||||++.+.+. ++++|+|.|+..|+.+|.. ..||+||...
T Consensus 20 ~~l~CpIC~~~~~~p----v~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~ 68 (103)
T d1jm7a_ 20 KILECPICLELIKEP----VSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI 68 (103)
T ss_dssp HHTSCSSSCCCCSSC----CBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCC
T ss_pred cCcCCCccCchhCCe----EEcCCCCchhhHHHHHHHHHCCCCCcCcCCCCcC
Confidence 345899999999764 4568999999999999961 4799999865
No 14
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]}
Probab=98.18 E-value=1.9e-07 Score=67.12 Aligned_cols=46 Identities=28% Similarity=0.609 Sum_probs=34.2
Q ss_pred CCCCCCCccccccCCCCcceee---ecCCCccchhhhhccc----cccccccccc
Q 018432 165 TELPTCPICLERLDPDTSGILS---TICDHSFQCSCTAKWT----VLSCQVCRFC 212 (356)
Q Consensus 165 ~elptCpICLe~ld~~~sgilt---~~C~H~FH~~Cl~kW~----~ssCPvCR~~ 212 (356)
.+.+.|+||++.++... +.. ..|.|.||..|+.+|. +.+||+||..
T Consensus 4 ed~~~C~IC~~~~~~~~--~~~c~c~~c~h~~H~~Cl~~W~~~~~~~~CP~Cr~~ 56 (60)
T d1vyxa_ 4 EDVPVCWICNEELGNER--FRACGCTGELENVHRSCLSTWLTISRNTACQICGVV 56 (60)
T ss_dssp CSCCEETTTTEECSCCC--CCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCB
T ss_pred CCCCCCccCCccCCCce--eEecccCCCCCEEcHHHHHHHHhhCCCCCCcccCCe
Confidence 46789999999876531 221 1235999999999996 4689999974
No 15
>d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.16 E-value=3e-07 Score=71.38 Aligned_cols=44 Identities=27% Similarity=0.528 Sum_probs=36.6
Q ss_pred CCCCCCccccccCCCCcceeeecCCCccchhhhhccc---ccccccccccc
Q 018432 166 ELPTCPICLERLDPDTSGILSTICDHSFQCSCTAKWT---VLSCQVCRFCH 213 (356)
Q Consensus 166 elptCpICLe~ld~~~sgilt~~C~H~FH~~Cl~kW~---~ssCPvCR~~~ 213 (356)
+.-+||||++.+.+ .++++|+|.|...|+.+|. +..||+||...
T Consensus 22 ~~l~C~IC~~~~~~----pv~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~p~ 68 (86)
T d1rmda2 22 KSISCQICEHILAD----PVETSCKHLFCRICILRCLKVMGSYCPSCRYPC 68 (86)
T ss_dssp HHTBCTTTCSBCSS----EEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBC
T ss_pred cCcCCccCCcchhc----ceecCCCChhhHHHHHHHHhhCCCcCcccCCCC
Confidence 44589999999875 3556999999999999996 46799999854
No 16
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.13 E-value=2.7e-07 Score=65.68 Aligned_cols=42 Identities=14% Similarity=0.067 Sum_probs=36.3
Q ss_pred CCCccccccCCCCcceeeecCCCccchhhhhccc--ccccccccccc
Q 018432 169 TCPICLERLDPDTSGILSTICDHSFQCSCTAKWT--VLSCQVCRFCH 213 (356)
Q Consensus 169 tCpICLe~ld~~~sgilt~~C~H~FH~~Cl~kW~--~ssCPvCR~~~ 213 (356)
.||||++.+.+. +.+..|+|.|+..|+.+|. +..||+||...
T Consensus 2 ~C~Ic~~~~~~P---v~~~~cGh~fc~~cI~~~l~~~~~CP~c~~~l 45 (56)
T d2baya1 2 LCAISGKVPRRP---VLSPKSRTIFEKSLLEQYVKDTGNDPITNEPL 45 (56)
T ss_dssp CCTTTCSCCSSE---EEETTTTEEEEHHHHHHHHHHHSBCTTTCCBC
T ss_pred CCccCCchHHhc---CccCCCCCcccHHHHHHHHhhccCCCccCCcC
Confidence 699999999864 4666799999999999997 67899999865
No 17
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.81 E-value=3.9e-06 Score=63.27 Aligned_cols=43 Identities=12% Similarity=-0.086 Sum_probs=35.6
Q ss_pred CCCCCccccccCCCCcceeeecCCCccchhhhhccc---ccccccccccc
Q 018432 167 LPTCPICLERLDPDTSGILSTICDHSFQCSCTAKWT---VLSCQVCRFCH 213 (356)
Q Consensus 167 lptCpICLe~ld~~~sgilt~~C~H~FH~~Cl~kW~---~ssCPvCR~~~ 213 (356)
.-.||||++-|.+. ++++|+|+|...|+.+|. ...||+||...
T Consensus 7 ~l~CpIc~~l~~dP----v~~~cGhtfc~~ci~~~l~~~~~~cP~c~~~l 52 (80)
T d2c2la2 7 YLCGKISFELMREP----CITPSGITYDRKDIEEHLQRVGHFNPVTRSPL 52 (80)
T ss_dssp TTBCTTTCSBCSSE----EECSSCCEEETTHHHHHHHHTCSSCTTTCCCC
T ss_pred cccCcCcCchhhhh----cccCCcCeecHHHHHHHHhcCCccCCCccccc
Confidence 34699999999874 456999999999999996 35799999743
No 18
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=97.68 E-value=9.7e-06 Score=60.65 Aligned_cols=45 Identities=22% Similarity=0.410 Sum_probs=37.1
Q ss_pred CCCCCCCccccccCCCCcceeeecCCCccchhhhhccc---ccccccccccc
Q 018432 165 TELPTCPICLERLDPDTSGILSTICDHSFQCSCTAKWT---VLSCQVCRFCH 213 (356)
Q Consensus 165 ~elptCpICLe~ld~~~sgilt~~C~H~FH~~Cl~kW~---~ssCPvCR~~~ 213 (356)
-+.-.||||++.|.+. ++++|+|+|...|+.+|. ...||.|+...
T Consensus 6 P~~l~CpIc~~~m~dP----V~~~cgh~fc~~ci~~~~~~~~~~cP~~~~~l 53 (78)
T d1t1ha_ 6 PEYFRCPISLELMKDP----VIVSTGQTYERSSIQKWLDAGHKTCPKSQETL 53 (78)
T ss_dssp SSSSSCTTTSCCCSSE----EEETTTEEEEHHHHHHHHTTTCCBCTTTCCBC
T ss_pred CccCCCcCcCchhhCc----eEccCCCcchHHHHHHHHHHCCCCCCcccccC
Confidence 3667899999999874 456899999999999996 35699998754
No 19
>d1wima_ g.44.1.1 (A:) UbcM4-interacting protein 4 (KIAA0161) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.08 E-value=8e-05 Score=57.06 Aligned_cols=37 Identities=16% Similarity=0.409 Sum_probs=29.2
Q ss_pred CCCCCCCccccccCCCCcceeeecCCCccchhhhhccc
Q 018432 165 TELPTCPICLERLDPDTSGILSTICDHSFQCSCTAKWT 202 (356)
Q Consensus 165 ~elptCpICLe~ld~~~sgilt~~C~H~FH~~Cl~kW~ 202 (356)
.....||||++.+..+ ..+....|+|.|+..|+..|.
T Consensus 3 ~~~~~C~IC~~~~~~~-~~~~~~~C~H~fC~~Cl~~~~ 39 (94)
T d1wima_ 3 SGSSGCKLCLGEYPVE-QMTTIAQCQCIFCTLCLKQYV 39 (94)
T ss_dssp CSBCCCSSSCCCCBGG-GEEEETTTTEEEEHHHHHHHH
T ss_pred CCCCcCccCCCcccCC-ceEEECCCCCEeCCcCHHHHH
Confidence 3456899999998753 234455899999999999986
No 20
>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.79 E-value=0.00025 Score=55.31 Aligned_cols=43 Identities=12% Similarity=-0.142 Sum_probs=34.9
Q ss_pred CCCCCccccccCCCCcceeeecC-CCccchhhhhccc--ccccccccccc
Q 018432 167 LPTCPICLERLDPDTSGILSTIC-DHSFQCSCTAKWT--VLSCQVCRFCH 213 (356)
Q Consensus 167 lptCpICLe~ld~~~sgilt~~C-~H~FH~~Cl~kW~--~ssCPvCR~~~ 213 (356)
.-.||||++.|.+. ++++| +|+|...||.+|. +..||+||...
T Consensus 22 ~f~CPI~~~lm~dP----V~~~~~~~ty~r~~I~~~l~~~~~~P~~~~~l 67 (98)
T d1wgma_ 22 EFLDPIMSTLMCDP----VVLPSSRVTVDRSTIARHLLSDQTDPFNRSPL 67 (98)
T ss_dssp TTBCTTTCSBCSSE----EECTTTCCEEEHHHHHHHTTTSCBCTTTCSBC
T ss_pred HhCCcCchhHHHHH----HhcccccchhhHHHHHHHHHhcCCcccccccc
Confidence 46899999999974 34455 5699999999997 67899998854
No 21
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=96.45 E-value=0.011 Score=43.55 Aligned_cols=71 Identities=17% Similarity=0.243 Sum_probs=59.8
Q ss_pred CccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCC-CCcceEEEEEeCChhhHHHHHhhhcCCcCCCC
Q 018432 64 RSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDA-MEDRYSVLIKLVDQLTADEFYSNLNGKRFSPA 135 (356)
Q Consensus 64 ~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~-~~~~ymvLikF~s~~~A~eF~~~~ng~~Fnsl 135 (356)
+++.|.|-.+|..+|-.+|..+++.+ ..|..++++++.. -.++-.+.++|.+.+.|..-.+.+||..|...
T Consensus 5 ~~t~lfV~nlp~~~te~~l~~~F~~~-G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~ 76 (85)
T d1b7fa2 5 KDTNLYVTNLPRTITDDQLDTIFGKY-GSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGG 76 (85)
T ss_dssp TTCEEEEESCCTTCCHHHHHHHHTSS-SCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhh-CCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCC
Confidence 45679999999999999999999876 4699999998532 13455789999999999999999999988643
No 22
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.42 E-value=0.0068 Score=44.50 Aligned_cols=69 Identities=12% Similarity=0.173 Sum_probs=58.2
Q ss_pred ccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCC-CCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 65 STCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDA-MEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 65 ~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~-~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
+..|.|-.+|..+|-.||..+++.+- .|.+++|+++.. -.++-.+.++|.+.++|+.-...+||..|..
T Consensus 9 ~~~l~V~nL~~~~te~~l~~~F~~~G-~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g 78 (83)
T d2cqca1 9 NCCLGVFGLSLYTTERDLREVFSKYG-PIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDG 78 (83)
T ss_dssp GGCEEEESCCSSCCHHHHHHHHHTTS-CEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETT
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhC-CCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECC
Confidence 57899999999999999999987654 588999998532 2346689999999999999999999998863
No 23
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.42 E-value=0.01 Score=43.83 Aligned_cols=70 Identities=17% Similarity=0.265 Sum_probs=59.1
Q ss_pred CccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCC-CCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 64 RSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDA-MEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 64 ~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~-~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
+++.|.|=.+|..+|-.||..+++.+- .|.+++++++.. -.++-...++|.+.++|+.-.+.+||+.|..
T Consensus 5 k~~~lfV~nLp~~~te~~L~~~F~~~G-~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G 75 (85)
T d1fxla2 5 RDANLYVSGLPKTMTQKELEQLFSQYG-RIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSG 75 (85)
T ss_dssp TTCEEEEESCCTTCCHHHHHHHHGGGS-CEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTT
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhC-CccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCC
Confidence 456799999999999999999997654 599999998532 1356689999999999999999999999864
No 24
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.36 E-value=0.0086 Score=43.57 Aligned_cols=68 Identities=22% Similarity=0.355 Sum_probs=56.9
Q ss_pred cEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCC-CcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 66 TCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAM-EDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 66 ~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~-~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
+.|.|=.+|..++-.||..+++.+- .|..++++++... .++-.+.++|.+.++|+.-.+.+||..|..
T Consensus 3 t~l~V~nLp~~~te~~l~~~f~~~G-~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g 71 (82)
T d1fxla1 3 TNLIVNYLPQNMTQEEFRSLFGSIG-EIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQT 71 (82)
T ss_dssp SEEEEESCCTTCCHHHHHHHHHTTS-CEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhC-CcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECC
Confidence 4599999999999999999998753 6999999985321 234469999999999999999999998864
No 25
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=96.32 E-value=0.013 Score=43.64 Aligned_cols=69 Identities=13% Similarity=0.105 Sum_probs=57.5
Q ss_pred CccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCC-CcceEEEEEeCChhhHHHHHhhhcCCcCC
Q 018432 64 RSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAM-EDRYSVLIKLVDQLTADEFYSNLNGKRFS 133 (356)
Q Consensus 64 ~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~-~~~ymvLikF~s~~~A~eF~~~~ng~~Fn 133 (356)
.+.+|.|-.+|..+|-.||..+++.+ ..|..++++++..+ .++-.+.++|.+.++|..-...+||..+.
T Consensus 6 ~~~~l~V~nL~~~~t~~~l~~~F~~~-G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~ 75 (88)
T d1rk8a_ 6 EGWILFVTSIHEEAQEDEIQEKFCDY-GEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIM 75 (88)
T ss_dssp -CEEEEEESCCTTCCHHHHHHHHGGG-SCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEET
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHc-CCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEEC
Confidence 46789999999999999999998765 35999999985321 23556999999999999999999998875
No 26
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.31 E-value=0.018 Score=43.91 Aligned_cols=71 Identities=13% Similarity=0.203 Sum_probs=60.3
Q ss_pred CCccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 63 SRSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 63 ~~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
.+.+.|.|-.+|..+|-.||..+++.+- .|..++++++....++..+.+.|.+.++|+.=.+.+||+.+..
T Consensus 16 ~~~~~lfV~nLp~~~te~~L~~~F~~~G-~i~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~g 86 (101)
T d1x5oa1 16 QDPTNLYISNLPLSMDEQELENMLKPFG-QVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKT 86 (101)
T ss_dssp CCTTEEEEESCCTTCCHHHHHHTTTTTS-CEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhhcc-cccceeeecccccccccceeEEeCCHHHHHHHHHHhCCCEECC
Confidence 3557899999999999999999997763 4788888886544567789999999999999999999999864
No 27
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=96.22 E-value=0.0061 Score=44.49 Aligned_cols=69 Identities=12% Similarity=0.154 Sum_probs=57.7
Q ss_pred ccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCC-CcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 65 STCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAM-EDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 65 ~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~-~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
++.|.|=.+|..+|-.||..+++.+- .|..++++++... .++-.+.++|.+.++|+.-.+.+||..|..
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G-~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g 71 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIG-PINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRN 71 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTS-CEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhC-CcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECC
Confidence 45699999999999999999997764 4889999985421 235579999999999999999999998863
No 28
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=96.15 E-value=0.012 Score=43.20 Aligned_cols=64 Identities=11% Similarity=0.244 Sum_probs=56.2
Q ss_pred ccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCC
Q 018432 65 STCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFS 133 (356)
Q Consensus 65 ~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fn 133 (356)
+.+|.|=.+|..++-.+|..++..+ ..|..+++++. ++-++.++|.+.++|..-...+||..|.
T Consensus 8 ~~tl~V~nLp~~~t~~~l~~~f~~~-G~i~~v~~~~~----~~g~afV~f~~~~~A~~A~~~l~g~~~~ 71 (83)
T d2b0ga1 8 NQILFLTNLPEETNEMMLSMLFNQF-PGFKEVRLVPN----RHDIAFVEFTTELQSNAAKEALQGFKIT 71 (83)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHTTS-TTEEEEEECTT----TCSCEEEEESSHHHHHHHHHHHTTCBSS
T ss_pred CCEEEEECCCCCCCHHHHHhhhccC-ccEEEeeeecc----cceeEEEecCCHHHHHHHHHHhCCcEeC
Confidence 5789999999999999999998765 46889999884 2447999999999999999999999884
No 29
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.13 E-value=0.016 Score=41.92 Aligned_cols=67 Identities=9% Similarity=0.012 Sum_probs=55.7
Q ss_pred cEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCCC
Q 018432 66 TCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSPA 135 (356)
Q Consensus 66 ~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fnsl 135 (356)
+.|.|=.+|..+|..|+.+|++.+ ..|..++++++.+.+ +-.+.++|.+.++|..-. ..||+.|...
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~-G~I~~v~~~~~~~~~-~~~afV~F~~~~~a~~Al-~~~~~~i~g~ 67 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHC-GPIIHVDVADSLKKN-FRFARIEFARYDGALAAI-TKTHKVVGQN 67 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGG-SCEEEEEEEECTTSS-SEEEEEEESSHHHHHHHH-TTTTCEETTE
T ss_pred CEEEEECCCCCCCHHHHHHHHhcC-CceEEEEEEeecccc-ceEEEEEEcchHHhHHHH-HhcCcEECCE
Confidence 468899999999999999999764 578899999976644 447899999999998886 4799888653
No 30
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.02 E-value=0.0083 Score=44.20 Aligned_cols=70 Identities=17% Similarity=0.105 Sum_probs=56.1
Q ss_pred ccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 65 STCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 65 ~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
.++|-|-.+|..++-.|+..|+..+-.-...+++..+..-.++-.+.++|.++++|+.-...+||+.++.
T Consensus 9 ~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~g 78 (86)
T d2cqpa1 9 PTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGS 78 (86)
T ss_dssp SEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETT
T ss_pred CCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECC
Confidence 4679999999999999999999887544444555554332346679999999999999999999998764
No 31
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.99 E-value=0.015 Score=44.88 Aligned_cols=71 Identities=14% Similarity=0.268 Sum_probs=59.5
Q ss_pred CCCCccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 61 PNSRSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 61 ~~~~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
|..-+.+|.|=.+|..+|-.+|..+++.+ ..|..+++.++. .++-.+.+.|.+.++|+.-...+||..|..
T Consensus 3 pp~~~r~l~V~nLp~~~te~~l~~~F~~~-G~v~~i~~~~~~--~~kG~afV~f~~~~~A~~Ai~~l~g~~~~g 73 (114)
T d2f9da1 3 PPEVNRILYIRNLPYKITAEEMYDIFGKY-GPIRQIRVGNTP--ETRGTAYVVYEDIFDAKNACDHLSGFNVCN 73 (114)
T ss_dssp CTTCCSEEEEESCCTTCCHHHHHHHHHTT-SCEEEEEEECST--TTTTEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred ccCCCCEEEEECCCCCCCHHHHHHHHhhc-CCeEeecccccC--CcCCeEEEEECCHHHHHHHHHHhCCCEECC
Confidence 33446789999999999999999998776 358889988754 346679999999999999999999999864
No 32
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.91 E-value=0.015 Score=43.30 Aligned_cols=69 Identities=7% Similarity=0.172 Sum_probs=58.3
Q ss_pred CccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 64 RSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 64 ~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
+...|.|=.+|..+|-.||.++++.+ ..|..++++++... ++-.+.++|.+.++|..-.+.+||..+..
T Consensus 7 ~~~tl~V~nLp~~~te~~l~~~F~~~-G~i~~v~i~~d~~~-~~~~afV~f~~~~~A~~A~~~l~~~~~~g 75 (90)
T d2cqia1 7 QPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEHTS-NDPYCFVEFYEHRDAAAALAAMNGRKILG 75 (90)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHHHHH-SCEEEEEEECCCCS-SCCEEEEEESSHHHHHHHHHHHTTEEETT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHhc-CCceeeeeecccCc-cceeeEEEECCHHHHHHHHHHcCCCEECC
Confidence 35689999999999999999988665 45899999986543 45579999999999999999999998764
No 33
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.87 E-value=0.02 Score=41.69 Aligned_cols=67 Identities=6% Similarity=0.022 Sum_probs=56.3
Q ss_pred EEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCC-CCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 67 CIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDA-MEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 67 ~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~-~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
-|.|=.+|..+|-.||.+++..+ ..|.+++|+++.. -.++-.+.++|.+.++|..-...+||+.++.
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~-G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~g 69 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPA-GPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKG 69 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGG-SCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETT
T ss_pred EEEEeCCCCcCCHHHHHHHHHHh-CCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECC
Confidence 37788999999999999999765 4699999998542 1346689999999999999999999998864
No 34
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.79 E-value=0.023 Score=43.13 Aligned_cols=72 Identities=13% Similarity=0.111 Sum_probs=57.5
Q ss_pred CCCCCccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCC--cceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 60 NPNSRSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAME--DRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 60 ~~~~~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~--~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
.|......|.|=.+|..+|-.||..|++.+ .+..++++++...+ ++-.+.++|.+.++|+... ..|+..|..
T Consensus 10 ~p~~p~~~v~V~nLp~~~te~~l~~~f~~~--g~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~g 83 (104)
T d1wi8a_ 10 LPKSPPYTAFLGNLPYDVTEESIKEFFRGL--NISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGN 83 (104)
T ss_dssp CCSSSCEEEEEESCCSSCCHHHHHHHTTTS--CEEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETT
T ss_pred CCCCCCCEEEEeCCCCcCCHHHHHHHHHHh--ccccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECC
Confidence 444456789999999999999999999887 37888888754322 3447889999999999886 589988864
No 35
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.66 E-value=0.044 Score=40.89 Aligned_cols=69 Identities=13% Similarity=0.181 Sum_probs=59.0
Q ss_pred CccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 64 RSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 64 ~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
....|.|=.+|..++-.||.++++.+- .|..++++++.+. .+-...++|.+.+.|+.=...+||..|..
T Consensus 10 ~~~~l~v~nLp~~~t~~~L~~~F~~~G-~v~~v~~~~~~~~-~kg~afV~f~~~~~a~~Ai~~l~~~~~~g 78 (93)
T d2cq3a1 10 TPKRLHVSNIPFRFRDPDLRQMFGQFG-KILDVEIIFNERG-SKGFGFVTFENSADADRAREKLHGTVVEG 78 (93)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHGGGTS-CEEEEEEECCTTT-TCCEEEEEESCHHHHHHHHHHHTTCEETT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcc-eeeeccccccccC-CcceeEEEECCHHHHHHHHHHcCCCEECC
Confidence 345699999999999999999997764 5889999986654 46678999999999999999999998864
No 36
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.61 E-value=0.025 Score=41.74 Aligned_cols=68 Identities=12% Similarity=0.218 Sum_probs=56.1
Q ss_pred ccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 65 STCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 65 ~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
...|.|=.+|..+|-.||..|+..+- .|..+++.++..-.++-.+.+.|.+.++|..... .||..|..
T Consensus 6 ~rtvfV~nlp~~~te~~l~~~F~~~G-~v~~v~l~~~~~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g 73 (85)
T d1zh5a2 6 NRSVYIKGFPTDATLDDIKEWLEDKG-QVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVE-TPGQKYKE 73 (85)
T ss_dssp TTEEEEECCCTTCCHHHHHHHHTTSC-CEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHT-CCCCEETT
T ss_pred cCEEEEECCCCCCCHHHHHHHHHHhc-ccccceeeeeccCCcceEEEEEEcCHHHHHHHHH-HCCCEECC
Confidence 45799999999999999999997763 4888999886533446689999999999999985 58888764
No 37
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.57 E-value=0.018 Score=43.97 Aligned_cols=65 Identities=18% Similarity=0.360 Sum_probs=55.2
Q ss_pred ccEEEEEec-CCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 65 STCIFVVAV-PNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 65 ~~~lciLaV-P~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
+++|.|=.+ |..+|..||..++..+ ..|.+++|+++. +-.+.++|.+.++|......+||..|..
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~f-G~I~~v~i~~~~----kg~afV~f~~~~~A~~ai~~lng~~l~g 67 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVY-GDVQRVKILFNK----KENALVQMADGNQAQLAMSHLNGHKLHG 67 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHH-TCEEEEEECCTT----SCCEEEEESCHHHHHHHHHHHTTCBCSS
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhc-cccceEEEEecc----cceEEEEECCHHHHHHHHHHhCCCEECC
Confidence 578999999 5679999999987654 469999999842 4479999999999999999999999874
No 38
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.56 E-value=0.032 Score=42.40 Aligned_cols=65 Identities=11% Similarity=0.086 Sum_probs=54.9
Q ss_pred CccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCCC
Q 018432 64 RSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSPA 135 (356)
Q Consensus 64 ~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fnsl 135 (356)
....|.|=.+|..++..||..++..+- .|..++|.+ ++ .+.+.|.+.+.|+.=.+.+||..|+.-
T Consensus 14 ~~~~i~V~Nlp~~~~~~~L~~~F~~~G-~v~~~~i~~-~g-----~afV~f~~~~~a~~Ai~~lng~~~~g~ 78 (98)
T d1wg4a_ 14 SDFRVLVSGLPPSGSWQDLKDHMREAG-DVCYADVQK-DG-----MGMVEYLRKEDMEYALRKLDDTKFRSH 78 (98)
T ss_dssp CSCEEEEECCCSSCCHHHHHHHHTTSS-CEEEEEEET-TT-----EEEEEESSHHHHHHHHHHHSSEEEECT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHhhc-ccccccccc-cc-----eEEEEECCHHHHHHHHHHhCCCEeCCe
Confidence 456799999999999999999997653 477888766 22 788999999999999999999998753
No 39
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.56 E-value=0.017 Score=43.61 Aligned_cols=64 Identities=11% Similarity=0.098 Sum_probs=56.2
Q ss_pred ccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 65 STCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 65 ~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
+..|.|=.+|..+|-.||.+++..+ ..|..++++++ +-...++|.+.++|..-...+||..|..
T Consensus 17 s~tl~V~nLp~~~t~~~l~~~f~~~-G~i~~~~~~~~-----~~~afV~f~~~~~A~~A~~~l~~~~i~g 80 (97)
T d1whya_ 17 TTRLWVGGLGPNTSLAALAREFDRF-GSIRTIDHVKG-----DSFAYIQYESLDAAQAACAKMRGFPLGG 80 (97)
T ss_dssp CSCEEEECCCSSCCHHHHHHHHHTT-SCEEEEEECSS-----SCCEEEEESSHHHHHHHHHHHTTCBCSS
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHhh-cccceEeeecc-----ccEEEeccCCHHHHHHHHHHhCCCEeCC
Confidence 5679999999999999999999877 57889998874 3378999999999999999999999864
No 40
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.48 E-value=0.034 Score=41.65 Aligned_cols=69 Identities=7% Similarity=0.029 Sum_probs=58.3
Q ss_pred ccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCC-CcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 65 STCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAM-EDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 65 ~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~-~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
...|.|=.+|..+|-.||..+++.+- .|.+++++++..+ .++-.+.++|.+.++|+.-...+||..+..
T Consensus 9 ~~tlfV~nLp~~~t~~~l~~~F~~~G-~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g 78 (93)
T d1x5ua1 9 DATVYVGGLDEKVSEPLLWELFLQAG-PVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYG 78 (93)
T ss_dssp TTEEEEECCCTTCCHHHHHHHHHTTS-CEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSS
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHhC-CccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECC
Confidence 56799999999999999999987763 6889999985321 345579999999999999999999999865
No 41
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.46 E-value=0.017 Score=43.60 Aligned_cols=68 Identities=9% Similarity=0.097 Sum_probs=54.0
Q ss_pred ccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeec--CCCCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 65 STCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRN--DAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 65 ~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~--~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
+..|.|-.+|..++-.||..+++.+- .|..++++++ .+ .++..+.++|.+.++|+.-...+||..|..
T Consensus 18 s~tl~V~nLp~~~t~~~l~~~f~~~G-~v~~~~~~~~~~~g-~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g 87 (102)
T d2cpxa1 18 NKVLYLKNLSPRVTERDLVSLFARFQ-EKKGPPIQFRMMTG-RMRGQAFITFPNKEIAWQALHLVNGYKLYG 87 (102)
T ss_dssp CSEEEEECCCTTCCHHHHHHHTHHHH-HSSSSCCEEEEECS-SSCSEEEEECSSHHHHHHHHHHSTTCBCSS
T ss_pred CCEEEEeCCCCCCCHHHHHHHHhhcc-ceeeEEeecccccc-cccccceEEeccHHHHHHHHHHhCCCEECC
Confidence 57899999999999999999987652 3344444432 23 357789999999999999999999998863
No 42
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.39 E-value=0.053 Score=41.22 Aligned_cols=73 Identities=11% Similarity=0.083 Sum_probs=56.2
Q ss_pred CCCccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCCC
Q 018432 62 NSRSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSPA 135 (356)
Q Consensus 62 ~~~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fnsl 135 (356)
..++..|.|-.+|-..|-.|+.+|+..+-..+..++++.+.....+-.+.++|.+.++|+.-.. +|+..|..-
T Consensus 12 ~~~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR 84 (104)
T d1wg5a_ 12 TANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHR 84 (104)
T ss_dssp CSCCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSS
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcce
Confidence 3456789999999999999999999887554555555554433345589999999999998775 888888654
No 43
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.38 E-value=0.051 Score=40.62 Aligned_cols=70 Identities=11% Similarity=0.226 Sum_probs=58.8
Q ss_pred CccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCC-CcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 64 RSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAM-EDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 64 ~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~-~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
.+..|.|=.+|..+|-.+|..+++.+- .|.+++++++... .++-.+.++|.+.++|..-...+||..+..
T Consensus 6 ~s~tlfV~nlp~~~te~~l~~~F~~~G-~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g 76 (93)
T d1h2vz_ 6 KSCTLYVGNLSFYTTEEQIYELFSKSG-DIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDD 76 (93)
T ss_dssp TCCEEEEESCCTTCCHHHHHHHHGGGS-CEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETT
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHC-CcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECC
Confidence 467899999999999999999988754 5999999985432 234469999999999999999999998753
No 44
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.35 E-value=0.043 Score=41.81 Aligned_cols=64 Identities=11% Similarity=0.083 Sum_probs=53.7
Q ss_pred CCccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcC
Q 018432 63 SRSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRF 132 (356)
Q Consensus 63 ~~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~F 132 (356)
..+.+|.|=.+|..+|-.||.+++..+ ..|.+++++|.. -.++|+|.+.++|......+++.++
T Consensus 13 ~ps~~l~v~nlp~~~te~~l~~~F~~f-G~I~~~~~~~~k-----~~AfV~f~~~e~A~~ai~~~~~~~~ 76 (104)
T d1wexa_ 13 SVSPVVHVRGLCESVVEADLVEALEKF-GTICYVMMMPFK-----RQALVEFENIDSAKECVTFAADVPV 76 (104)
T ss_dssp CCCSEEEEESCCSSCCHHHHHHHHTTT-SCEEEEEEETTT-----TEEEEEESSHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHhhhhc-ccceEEEEEecc-----eeEEEEeCCHHHHHHHHHHHcCCCc
Confidence 357899999999999999999998765 358899998832 2699999999999999988876554
No 45
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.29 E-value=0.035 Score=40.87 Aligned_cols=67 Identities=21% Similarity=0.352 Sum_probs=57.2
Q ss_pred EEEEecCCCCCHHHHHHHhcccccceeEEEEeecCC-CCcceEEEEEeCChhhHHHHHhhhcCCcCCCC
Q 018432 68 IFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDA-MEDRYSVLIKLVDQLTADEFYSNLNGKRFSPA 135 (356)
Q Consensus 68 lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~-~~~~ymvLikF~s~~~A~eF~~~~ng~~Fnsl 135 (356)
|.|=.+|..+|-.||..+++.+- .|..++|+++.. -.++-...++|.+.++|..-...+||..+...
T Consensus 4 lfV~nlp~~~te~~l~~~F~~~G-~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~ 71 (85)
T d2u2fa_ 4 LFIGGLPNYLNDDQVKELLTSFG-PLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDK 71 (85)
T ss_dssp EEEETCCSSCCSHHHHHHHTSSS-CEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSS
T ss_pred EEEECCCCCCCHHHHHHHHHhcC-ccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCE
Confidence 78889999999999999998753 499999998532 13567899999999999999999999998753
No 46
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.29 E-value=0.028 Score=40.70 Aligned_cols=66 Identities=8% Similarity=0.029 Sum_probs=55.4
Q ss_pred EEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 68 IFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 68 lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
|.|=.+|..++-.||..+++.+- .|..+++.++..-..+-.+.++|.+.++|..-...+||+.++.
T Consensus 3 l~V~nLp~~~~~~~l~~~F~~~G-~v~~~~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g 68 (78)
T d1no8a_ 3 LLVSNLDFGVSDADIQELFAEFG-TLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDG 68 (78)
T ss_dssp EEEESCCTTCCHHHHHHHHHHHS-CEEEEEESCSSCCCSCCEEEEEESCHHHHHHHHHHHTTCEETT
T ss_pred EEEECCCCCCCHHHHHHHHHHhC-CCeEEEEEEeeccccceeEEEEECCHHHHHHHHHHhCCCEECC
Confidence 78889999999999999887653 5899999985433345579999999999999999999998864
No 47
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.09 E-value=0.033 Score=42.30 Aligned_cols=68 Identities=21% Similarity=0.254 Sum_probs=57.2
Q ss_pred cEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCC-CcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 66 TCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAM-EDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 66 ~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~-~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
..|.|=.+|..++-.||.++++.+ ..|..++|+++..+ .++-.+.++|.+.+.|+.....+||..|+.
T Consensus 9 rtl~V~nLp~~~te~~l~~~f~~~-G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g 77 (104)
T d1p1ta_ 9 RSVFVGNIPYEATEEQLKDIFSEV-GPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSG 77 (104)
T ss_dssp SCEEEESCCTTSCHHHHHHHHHTT-SCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSS
T ss_pred CEEEEECCCCcCCHHHHHHhhhcc-ccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECC
Confidence 468999999999999999999875 35899999985421 235578999999999999999999999875
No 48
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.08 E-value=0.04 Score=41.58 Aligned_cols=65 Identities=8% Similarity=0.178 Sum_probs=55.5
Q ss_pred CccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 64 RSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 64 ~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
....|.|=.+|..++-.||..++..+ ..|..++++++ +-.+.++|.+.++|..-...+||+.+..
T Consensus 17 ~~~~l~v~nL~~~~te~~L~~~F~~f-G~i~~v~i~~~-----kg~afV~f~~~~~A~~Ai~~l~~~~i~g 81 (96)
T d1x4ga1 17 KNCTVYCGGIASGLTDQLMRQTFSPF-GQIMEIRVFPE-----KGYSFVRFSTHESAAHAIVSVNGTTIEG 81 (96)
T ss_dssp SCCEEEEECCSSCCCHHHHHHHHHHH-SCEEEEEEETT-----TTEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHh-CCceEEEEEec-----ceEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 35689999999999999999988654 34888999984 3378999999999999999999998764
No 49
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.07 E-value=0.023 Score=41.18 Aligned_cols=68 Identities=13% Similarity=0.125 Sum_probs=52.3
Q ss_pred cEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCC-CCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 66 TCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDA-MEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 66 ~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~-~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
..|.|=.+|..+|-.||.++++.+ ..|..++++++.. -.++-.+.++|.+.++|+.-.+.+||..|+.
T Consensus 2 ~tl~v~nLp~~~t~~~l~~~f~~~-G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g 70 (81)
T d2ghpa1 2 CTLWMTNFPPSYTQRNIRDLLQDI-NVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEG 70 (81)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHHT-TCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETT
T ss_pred cEEEEECCCCcCCHHHHHHHHHHh-CcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECC
Confidence 468999999999999999999876 3455566665331 1235578999999999999999999998864
No 50
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.96 E-value=0.055 Score=40.45 Aligned_cols=67 Identities=9% Similarity=0.145 Sum_probs=56.0
Q ss_pred ccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 65 STCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 65 ~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
+..|.|=.+|..+|-.||.++++.+ ..|..+++.++. ..+-.+.+.|.+.++|+.=.+.+||..|..
T Consensus 14 ~~~l~V~nLp~~~t~~~l~~~F~~~-G~v~~~~~~~~~--~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g 80 (95)
T d1x4aa1 14 DCRIYVGNLPPDIRTKDIEDVFYKY-GAIRDIDLKNRR--GGPPFAFVEFEDPRDAEDAVYGRDGYDYDG 80 (95)
T ss_dssp SSEEEEESCCTTCCHHHHHHHHGGG-SCEEEEEECCSS--SSSCCEEEEESCHHHHHHHHHHHTTCEETT
T ss_pred CCEEEEECCCCCCCHHHHHHHHhcC-CceEEEEecccc--cccceEEEEECCHHHHHHHHHHhCCCEECC
Confidence 4569999999999999999999775 347777776643 346678999999999999999999999864
No 51
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.92 E-value=0.035 Score=41.60 Aligned_cols=67 Identities=16% Similarity=0.218 Sum_probs=57.7
Q ss_pred EEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCC--CCcceEEEEEeCChhhHHHHHhhhcCCcCC
Q 018432 67 CIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDA--MEDRYSVLIKLVDQLTADEFYSNLNGKRFS 133 (356)
Q Consensus 67 ~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~--~~~~ymvLikF~s~~~A~eF~~~~ng~~Fn 133 (356)
-|.|=.+|..+|-.+|..+++.+-..|.+++++++.. ..++..+.++|.+..+|..-.+.+++..|.
T Consensus 3 rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~ 71 (96)
T d2disa1 3 RLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQ 71 (96)
T ss_dssp EEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSC
T ss_pred EEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeE
Confidence 3788899999999999999998877899999998532 246779999999999999999999887764
No 52
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.89 E-value=0.03 Score=41.45 Aligned_cols=67 Identities=9% Similarity=0.159 Sum_probs=57.5
Q ss_pred cEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 66 TCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 66 ~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
..|.|=.+|..+|-.||..+++.+ ..|..++|+++.+ .++-.+.+.|.+.++|+.-...+||..++.
T Consensus 9 ~~l~V~nLp~~~t~~~l~~~F~~~-G~v~~~~i~~~~~-~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g 75 (89)
T d1cvja2 9 GNIFIKNLDKSIDNKALYDTFSAF-GNILSCKVVCDEN-GSKGYGFVHFETQEAAERAIEKMNGMLLND 75 (89)
T ss_dssp TEEEEESCCSSCCHHHHHHHHHTT-SCEEEEEECCBTT-BCCSCEEEEESCHHHHHHHTTSSSEEEETT
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhc-CCceEEEEEeecC-CCcceeEEEECCHHHHHHHHHHcCCCEECC
Confidence 459999999999999999998765 3588999998654 356679999999999999999999998864
No 53
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.88 E-value=0.011 Score=44.24 Aligned_cols=68 Identities=12% Similarity=0.212 Sum_probs=55.4
Q ss_pred ccEEEEEecCCCCCHHHHHHHhccc---ccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 65 STCIFVVAVPNYLSSDEFVRFCGSH---IDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 65 ~~~lciLaVP~~ms~~d~l~F~~~~---~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
+.+|.|=++|..+|-.||...+... ...|..+++.++. .++..+.++|.+.++|..-.+.+||..|..
T Consensus 3 ~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~~~--~~~g~afV~F~~~~~A~~A~~~~~~~~~~g 73 (91)
T d1nu4a_ 3 NHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSL--KMRGQAFVIFKEVSSATNALRSMQGFPFYD 73 (91)
T ss_dssp CSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHH--HHTTCEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEeeec--cCCCceEEEECCHHHHHHHHHHhCCCEECC
Confidence 5689999999999999997765322 2468888887743 356689999999999999999999998874
No 54
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.86 E-value=0.052 Score=39.54 Aligned_cols=66 Identities=6% Similarity=0.074 Sum_probs=53.8
Q ss_pred EEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCc----ceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 68 IFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMED----RYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 68 lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~----~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
|.|=.+|..+|-.||..+++.+ ..|..++|+++...+. +-.+.+.|.+.++|..-...+||..+..
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~-G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g 70 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKV-GAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDG 70 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTT-SCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETT
T ss_pred CEEcCCCCCCCHHHHHHHHHHh-CCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 5677899999999999998775 5688899988543332 3358999999999999999999988753
No 55
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.81 E-value=0.08 Score=40.09 Aligned_cols=69 Identities=6% Similarity=0.061 Sum_probs=56.2
Q ss_pred CccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCCC
Q 018432 64 RSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSPA 135 (356)
Q Consensus 64 ~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fnsl 135 (356)
....|.|=.+|...|-.|+.+|++.+ .+..++++++....++-.+.++|.+.+.|+.-.. .|++.|..-
T Consensus 14 ~~~~v~v~nLp~~~te~dl~~~F~~~--~~~~v~~~~~~~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR 82 (102)
T d1weza_ 14 TGHCVHMRGLPYRATENDIYNFFSPL--NPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMA-KDKANMQHR 82 (102)
T ss_dssp SSCEEEEESCCTTCCHHHHHHSSCSC--CCSEEEEEESSSSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSS
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHhcc--CcceeeeEEecCCcceEEEEEEECCHHHHHHHHH-cCCCEECCE
Confidence 45689999999999999999999886 3557788875543456689999999999999864 799988754
No 56
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.80 E-value=0.05 Score=39.98 Aligned_cols=65 Identities=17% Similarity=0.184 Sum_probs=52.4
Q ss_pred ccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCC
Q 018432 65 STCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFS 133 (356)
Q Consensus 65 ~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fn 133 (356)
+.+|.|-.+|..+|-.+|.++++.+-. |..++++... ++..+.++|.+.++|.+-...+||..+.
T Consensus 10 s~tL~V~NLp~~~te~~l~~~F~~~G~-v~~~~~~~~~---~~~~afV~f~~~~~A~~A~~~l~~~~i~ 74 (88)
T d2adca2 10 SATLHLSNIPPSVSEEDLKVLFSSNGG-VVKGFKFFQK---DRKMALIQMGSVEEAVQALIDLHNHDLG 74 (88)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSC-CEEEEEECSS---STTCEEEEESSHHHHHHHHHHHTTCBSS
T ss_pred CCEEEEECCCCCCCHHHHHHHhhccCC-EEEEEEeeec---ccceeEEEECCHHHHHHHHHhccCCEec
Confidence 578999999999999999999877643 4444444422 4558999999999999999999998763
No 57
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.67 E-value=0.082 Score=39.04 Aligned_cols=70 Identities=7% Similarity=0.146 Sum_probs=58.1
Q ss_pred CccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCC-CCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 64 RSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDA-MEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 64 ~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~-~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
+...|.|-.+|..++-.||..+++.+ ..|..++++++.. -.++-.+.++|.+.+.|..-...+||..|..
T Consensus 7 ~~~~i~V~nLp~~~t~~~l~~~f~~~-G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g 77 (90)
T d2cq0a1 7 DNATIRVTNLSEDTRETDLQELFRPF-GSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDH 77 (90)
T ss_dssp SSEEEEEESCCTTCCHHHHHTTSTTT-CCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHh-cccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECC
Confidence 45779999999999999999998764 3588999998532 1345579999999999999999999988853
No 58
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.61 E-value=0.054 Score=39.92 Aligned_cols=62 Identities=15% Similarity=0.213 Sum_probs=54.1
Q ss_pred EEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 67 CIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 67 ~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
.|.|-.+|..++-.||..+++.+ ..|.+++++++ +-.+.++|.+.++|+.-...+||..|..
T Consensus 10 ~l~V~nLp~~~~~~~l~~~F~~~-G~i~~i~~~~~-----k~~afV~f~~~~~A~~A~~~l~g~~i~g 71 (86)
T d2cpja1 10 RLFVGNLPPDITEEEMRKLFEKY-GKAGEVFIHKD-----KGFGFIRLETRTLAEIAKVELDNMPLRG 71 (86)
T ss_dssp EEEEESCCTTCCHHHHHHHTSTT-CCCSEEEEETT-----TTEEEEECSSSHHHHHHHHHHTTCCBTT
T ss_pred EEEEECCCCCCCHHHHHHHHHHh-CCceEeeeecc-----cceEEEEECCHHHHHHHHHHhCCCEECC
Confidence 49999999999999999998774 45889999874 3378999999999999999999999874
No 59
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.57 E-value=0.064 Score=40.10 Aligned_cols=72 Identities=15% Similarity=0.186 Sum_probs=56.2
Q ss_pred CCccEEEEEecCCCCCHHHHHHHhcccc-------cceeEEEEeecCC-CCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 63 SRSTCIFVVAVPNYLSSDEFVRFCGSHI-------DHVEELIFIRNDA-MEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 63 ~~~~~lciLaVP~~ms~~d~l~F~~~~~-------~~i~~iriir~~~-~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
.+.+.|.|-.+|..+|-.||.+|++.+- .....+++.++.. -..+..+.++|.+.++|+.-...+||..|+.
T Consensus 6 ~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g 85 (101)
T d2cpea1 6 SDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQG 85 (101)
T ss_dssp CCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEETT
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEECC
Confidence 4578899999999999999999997761 1223455555322 1346789999999999999999999999863
No 60
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.51 E-value=0.078 Score=38.24 Aligned_cols=64 Identities=11% Similarity=0.192 Sum_probs=53.3
Q ss_pred CccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCCC
Q 018432 64 RSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSPA 135 (356)
Q Consensus 64 ~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fnsl 135 (356)
++..|.|-++| +|-.||..+++.+ ..|..+++.+.. -.+.++|.+.++|+.-...+||..+...
T Consensus 4 ~~~ti~V~~~~--~te~~L~~~F~~~-G~I~~v~~~~~~-----~~afV~f~~~~~A~~Ai~~lng~~~~g~ 67 (79)
T d2bz2a1 4 KGNTLYVYGED--MTPTLLRGAFSPF-GNIIDLSMDPPR-----NCAFVTYEKMESADQAVAELNGTQVESV 67 (79)
T ss_dssp CCCEEEEECSS--CCHHHHHHHHSTT-CCCSCEEEETTT-----TEEEEECSSHHHHHHHHHHHTTCBCSSC
T ss_pred CCCEEEEECCC--CCHHHHHHHHhcc-CccceeeeccCC-----CEEEEEEcccHHHHHHHHHhCCCEECCE
Confidence 46778999987 8999999998776 458888888743 2689999999999999999999998653
No 61
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.41 E-value=0.061 Score=40.85 Aligned_cols=64 Identities=13% Similarity=0.252 Sum_probs=54.1
Q ss_pred ccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 65 STCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 65 ~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
+++|.|=.+|..++-.||..+++.+ ..|..++|.+ .+..+.|+|.+.++|..=...+||..|..
T Consensus 10 ~~~l~V~nLp~~~t~~~L~~~F~~f-G~I~~v~l~~-----~kg~afV~f~~~~~A~~A~~~lng~~~~g 73 (111)
T d1whxa_ 10 KTVILAKNLPAGTLAAEIQETFSRF-GSLGRVLLPE-----GGITAIVEFLEPLEARKAFRHLAYSKFHH 73 (111)
T ss_dssp EEEEEEESCCTTCCHHHHHHHHHTT-SCEEEEECCS-----SSSCEEEEESCHHHHHHHHHHHTTCBSSS
T ss_pred CCEEEEECCCCCCCHHHHHhhhhcc-CCccEEEeec-----cCceEEEEEcCHHHHHHHHHHHcCCccCC
Confidence 5789999999999999999999765 3577777643 35579999999999999999999999864
No 62
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.40 E-value=0.089 Score=39.27 Aligned_cols=70 Identities=10% Similarity=0.175 Sum_probs=57.5
Q ss_pred CccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCC--CCcceEEEEEeCChhhHHHHHhhh-cCCcCCC
Q 018432 64 RSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDA--MEDRYSVLIKLVDQLTADEFYSNL-NGKRFSP 134 (356)
Q Consensus 64 ~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~--~~~~ymvLikF~s~~~A~eF~~~~-ng~~Fns 134 (356)
.++.|.|-.+|..++-.||..+++.+ ..|..++|+++.. -.++-...++|.+.++|..-.... ||..|..
T Consensus 7 ~~~~l~V~nLp~~~~e~~l~~~F~~~-G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~G 79 (94)
T d2cpha1 7 TTSKILVRNIPFQANQREIRELFSTF-GELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYG 79 (94)
T ss_dssp CCCCEEEESCCTTCCHHHHHHHHHTT-SCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSS
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHh-CCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECC
Confidence 35669999999999999999999876 3689999987421 135778999999999999998886 8887753
No 63
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.39 E-value=0.13 Score=38.82 Aligned_cols=69 Identities=9% Similarity=0.175 Sum_probs=56.8
Q ss_pred ccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCC-CcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 65 STCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAM-EDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 65 ~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~-~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
+..|.|=.+|..++-.||..++..+- .|..++++++... .++-.+.++|.+.++|+.-...+||..|..
T Consensus 18 ~~~l~V~nLp~~~te~~l~~~F~~~G-~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g 87 (102)
T d2cpza1 18 GANLFIYHLPQEFGDQDLLQMFMPFG-NVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGM 87 (102)
T ss_dssp TCCEEEESCCSSCCHHHHHHHHGGGS-CCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETT
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhhc-cccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECC
Confidence 45699999999999999999997764 3777888875421 335579999999999999999999998864
No 64
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.35 E-value=0.043 Score=38.74 Aligned_cols=66 Identities=8% Similarity=0.158 Sum_probs=54.5
Q ss_pred EEEEecCCCCCHHHHHHHhcccccceeEEEEeecCC-CCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 68 IFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDA-MEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 68 lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~-~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
|.|=.+|..+|-.+|..+++.+ ..|..++++++.. -.++-.+.+.|.+.++|+.-.+.+||+.|+.
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~-G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~G 67 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPY-GKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQA 67 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTT-SCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCE
T ss_pred CEEeCCCCcCCHHHHHHHHhhh-ccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECC
Confidence 5677899999999999998775 4588888888542 2345579999999999999999999999864
No 65
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.20 E-value=0.083 Score=38.76 Aligned_cols=62 Identities=10% Similarity=0.229 Sum_probs=51.7
Q ss_pred CccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCc
Q 018432 64 RSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKR 131 (356)
Q Consensus 64 ~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~ 131 (356)
.+.+|.|=.+|..++-.|+..++.++ ..|..++++++. -.++++|.+.++|+...+.+++..
T Consensus 7 Ps~~l~V~nLp~~~t~~~L~~~f~~~-G~i~~v~~~~~~-----~~afV~f~~~e~A~~a~~~~~~~~ 68 (88)
T d2cq1a1 7 PSRVLHIRKLPGEVTETEVIALGLPF-GKVTNILMLKGK-----NQAFLELATEEAAITMVNYYSAVT 68 (88)
T ss_dssp CCSEEEEESCCTTCCHHHHHHTTTTT-SCEEEEEEETTT-----TEEEEEESSHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHhcc-cccccccccccc-----eEEEEEeCCHHHHHHHHHHHccCC
Confidence 46899999999999999999998775 358888888743 279999999999999988776543
No 66
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=94.19 E-value=0.062 Score=40.20 Aligned_cols=67 Identities=10% Similarity=0.193 Sum_probs=55.2
Q ss_pred CCccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 63 SRSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 63 ~~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
..+..|.|=.+|..+|-.||.++++.+ -.+++++..+ .++..+.+.|.+.+.|+.=...+||..|..
T Consensus 14 ~~~~~l~V~nL~~~~te~~l~~~F~~~----g~v~~~~~~~-~~~~~afV~f~~~~~A~~A~~~l~~~~~~g 80 (96)
T d1fjca_ 14 RAARTLLAKNLSFNITEDELKEVFEDA----LEIRLVSQDG-KSKGIAYIEFKSEADAEKNLEEKQGAEIDG 80 (96)
T ss_dssp TGGGEEEEESCCSSCCHHHHHHHHCSE----EEECCEEETT-EEEEEEEEEESSHHHHHHHHHHTTEEEETT
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhc----ccceeeeecC-ccccEEEEEeCCHHHHHHHHHHcCCCEECC
Confidence 347889999999999999999999874 3344455444 568899999999999999999999998864
No 67
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.11 E-value=0.11 Score=38.86 Aligned_cols=70 Identities=14% Similarity=0.218 Sum_probs=57.4
Q ss_pred CccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCC-CcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 64 RSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAM-EDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 64 ~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~-~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
.+.-|.|=.+|..+|-.||..++..+ ..|..++|+++... .++-...++|.+.+.|+.-...+||..|..
T Consensus 7 ~~~~lfV~nL~~~~t~~~l~~~F~~~-g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~g 77 (99)
T d1whwa_ 7 GSGRLFVRNLSYTSSEEDLEKLFSAY-GPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQG 77 (99)
T ss_dssp SCEEEEEECCCTTCCHHHHHHHHHTT-SCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSS
T ss_pred CCCEEEEECCCCcCCHHHHHHHHHhc-CCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECC
Confidence 35669999999999999999988664 45889999885421 234479999999999999999999999864
No 68
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.94 E-value=0.065 Score=38.79 Aligned_cols=67 Identities=10% Similarity=0.126 Sum_probs=52.5
Q ss_pred EEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCC-CcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 68 IFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAM-EDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 68 lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~-~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
|.|=.+|..+|-.||..+++.+-.-+..++++++..+ .++-...++|.+.++|+.-...+||..|..
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~g 68 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCN 68 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETT
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECC
Confidence 5678899999999999999876443444577775322 235578999999999999999999998753
No 69
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.93 E-value=0.12 Score=37.78 Aligned_cols=69 Identities=12% Similarity=0.179 Sum_probs=57.0
Q ss_pred ccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCC-CCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 65 STCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDA-MEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 65 ~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~-~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
+.-|.|=.+|..++-.||..|++.+ ..|..+++++... -..+..+.+.|.+.+.|+.-...+||..|..
T Consensus 5 ~~kifV~nLp~~~t~~~l~~~F~~~-G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g 74 (90)
T d1x5sa1 5 EGKLFVGGLSFDTNEQSLEQVFSKY-GQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDG 74 (90)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHHH-SCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTS
T ss_pred CCEEEEECCCCcCCHHHHHHhhhcc-ccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECC
Confidence 4558999999999999999999875 3588888887432 1235579999999999999999999999875
No 70
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.91 E-value=0.049 Score=40.22 Aligned_cols=69 Identities=7% Similarity=0.025 Sum_probs=57.6
Q ss_pred ccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCC-CCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 65 STCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDA-MEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 65 ~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~-~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
..+|.|=.+|..+|-.||..+++.+- .|..++++++.. -.++-.+.++|.+.+.|+.-...+||..+..
T Consensus 5 ~~tlfV~nLp~~~te~~l~~~F~~~G-~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g 74 (89)
T d2cqba1 5 KRVLYVGGLAEEVDDKVLHAAFIPFG-DITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFG 74 (89)
T ss_dssp CSCEEEESCCSSCCHHHHHHHHTTTS-CCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETT
T ss_pred CcEEEEeCCCCcCCHHHHHHHHhhCC-eEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECC
Confidence 46899999999999999999987764 588999998432 1345579999999999999999999998753
No 71
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.85 E-value=0.096 Score=38.73 Aligned_cols=70 Identities=11% Similarity=0.151 Sum_probs=54.9
Q ss_pred ccEEEEEecCCCCCHHHHHHHhccc--ccceeEEEEeecCCCC----cceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 65 STCIFVVAVPNYLSSDEFVRFCGSH--IDHVEELIFIRNDAME----DRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 65 ~~~lciLaVP~~ms~~d~l~F~~~~--~~~i~~iriir~~~~~----~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
..+|.|-++|..++-.|++....-| ...|..++|+++.... .+..+.++|.+.++|..=...+||..|..
T Consensus 8 ~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~g 83 (89)
T d2cpia1 8 KNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDG 83 (89)
T ss_dssp SSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETT
T ss_pred cCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECC
Confidence 4679999999999999996532222 3569999999854221 23679999999999999999999998864
No 72
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.34 E-value=0.12 Score=37.76 Aligned_cols=69 Identities=7% Similarity=0.109 Sum_probs=53.6
Q ss_pred CccEEEEEecCCCCCHHH-HHHHhcccccceeEEEEeecCC--CCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 64 RSTCIFVVAVPNYLSSDE-FVRFCGSHIDHVEELIFIRNDA--MEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 64 ~~~~lciLaVP~~ms~~d-~l~F~~~~~~~i~~iriir~~~--~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
....|.|-.+|..+|-.| |-.+++.+ ..|..++|.+++. ..++-.+.+.|.+.++|..-.. +||..|..
T Consensus 3 e~~~l~V~nLp~~~t~ed~l~~~F~~~-G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~g 74 (86)
T d2ghpa3 3 EGREIMIRNLSTELLDENLLRESFEGF-GSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGN 74 (86)
T ss_dssp TTTEEEEEEECTTTCCHHHHHHHHGGG-SCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETT
T ss_pred CCCEEEEECCCCCcccHHHHHHHHHhh-hhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECC
Confidence 467899999999998776 55676554 4699999987542 2346689999999999999874 89998864
No 73
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.10 E-value=0.24 Score=36.62 Aligned_cols=63 Identities=8% Similarity=0.137 Sum_probs=51.8
Q ss_pred CCccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCC-CCcceEEEEEeCChhhHHHHHhh
Q 018432 63 SRSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDA-MEDRYSVLIKLVDQLTADEFYSN 126 (356)
Q Consensus 63 ~~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~-~~~~ymvLikF~s~~~A~eF~~~ 126 (356)
.+.+.|.|=++|..+|-.||..+++.+ ..|..++|+++.. -.++-...+.|.+.++|++-...
T Consensus 6 ~~~~~lfV~nLp~~~te~~l~~~F~~~-G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~ 69 (90)
T d2cqga1 6 QKTSDLIVLGLPWKTTEQDLKEYFSTF-GEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ 69 (90)
T ss_dssp CCCCCEEEESCCSSCCHHHHHHHHGGG-SCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHS
T ss_pred cCCCeEEEECCCCCCCHHHHHHHHHhh-cccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhc
Confidence 356679999999999999999999875 4699999998532 23466899999999999888764
No 74
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.09 E-value=0.16 Score=37.21 Aligned_cols=62 Identities=15% Similarity=0.161 Sum_probs=53.2
Q ss_pred EEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCCCC
Q 018432 68 IFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSPAE 136 (356)
Q Consensus 68 lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fnsle 136 (356)
|.|=.+|..+|-.||..+++.+ ..|..+++.++ + .+.++|.+.++|+.=...+||..|..-.
T Consensus 3 vfV~nlp~~~~~~~l~~~F~~~-G~v~~~~i~~~-g-----~afV~f~~~~~a~~Ai~~l~g~~~~g~~ 64 (87)
T d3begb1 3 VVVSGLPPSGSWQDLKDHMREA-GDVCYADVYRD-G-----TGVVEFVRKEDMTYAVRKLDNTKFRSHE 64 (87)
T ss_dssp EEEEECCSSCCTTHHHHHHGGG-SCEEEEEECTT-S-----EEEEEESSHHHHHHHHHHHTTCBCCCTT
T ss_pred EEEECCCCcCCHHHHHHHHhhh-ccccccccccc-c-----eeeEEeCCHHHHHHHHHHhCCCEECCcE
Confidence 6788999999999999999765 35888988773 2 6889999999999999999999997644
No 75
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=92.97 E-value=0.29 Score=38.63 Aligned_cols=69 Identities=13% Similarity=0.178 Sum_probs=57.1
Q ss_pred ccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCC-CcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 65 STCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAM-EDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 65 ~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~-~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
.+.|.|=.+|..+|-.||..++..+ ..|..++|+++..+ .++-.+.++|.+.++|..-...+||..|+.
T Consensus 42 ~~~l~V~nLp~~~te~~l~~~F~~~-G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~g 111 (139)
T d1u6fa1 42 LRNLMVNYIPTTVDEVQLRQLFERY-GPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILN 111 (139)
T ss_dssp TSEEEEESCSTTCCHHHHHHHHHHH-SCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSS
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhh-ccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECC
Confidence 4679999999999999999988654 35899999985422 234469999999999999999999999874
No 76
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.69 E-value=0.19 Score=38.00 Aligned_cols=68 Identities=10% Similarity=0.241 Sum_probs=56.6
Q ss_pred ccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCC-CcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 65 STCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAM-EDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 65 ~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~-~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
...|.|-.+|..++-.||..++..+ ..|..++|+++..+ .++-...++|.+.++|..-. .+||..|..
T Consensus 18 ~~tifV~nL~~~~te~~l~~~F~~~-G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~-~l~g~~~~G 86 (101)
T d2cq4a1 18 ARTVFCMQLAARIRPRDLEDFFSAV-GKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLG 86 (101)
T ss_dssp HTEEEEESCCTTCCHHHHHHHHTTT-SCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHH-HHTTEEETT
T ss_pred CCEEEEECCCCCCCHHHHHHHHcCC-CeEEEEEeeecCCCccccceEEEEECCHHHHHHHH-HHCCCEECC
Confidence 4679999999999999999999875 46899999995421 24557999999999999887 599998864
No 77
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.64 E-value=0.25 Score=35.23 Aligned_cols=61 Identities=10% Similarity=0.190 Sum_probs=49.5
Q ss_pred EEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCCC
Q 018432 68 IFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSPA 135 (356)
Q Consensus 68 lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fnsl 135 (356)
|.|=.+|..++-.||..+++.+- +..+++.+ ++-.+.+.|.+.+.|.+-...+||..|...
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g--~~~~~~~~-----~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~ 61 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE--LKYCFVDK-----YKGTAFVTLLNGEQAEAAINTFHQSRLRER 61 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC--EEEEEEET-----TTTEEEEEESSHHHHHHHHHHHTTEESSSC
T ss_pred CEEeCCCCcCCHHHHHHHHhccc--ccceeecc-----cceeEEEEECCHHHHHHHHHHhCCccCCCC
Confidence 46778999999999999998874 44444444 334789999999999999999999998753
No 78
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.58 E-value=0.36 Score=34.99 Aligned_cols=68 Identities=6% Similarity=0.094 Sum_probs=53.8
Q ss_pred CccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCC-CCcceEEEEEeCChhhHHHHHhhhcCCcCC
Q 018432 64 RSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDA-MEDRYSVLIKLVDQLTADEFYSNLNGKRFS 133 (356)
Q Consensus 64 ~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~-~~~~ymvLikF~s~~~A~eF~~~~ng~~Fn 133 (356)
....|.|=.+|..+|-.||..++..+ ..|..++|+++.. -.++-...+.|.+.+.|+.-... ||..++
T Consensus 5 ~~~~lfV~nlp~~~te~~l~~~F~~~-G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~~-~~~~i~ 73 (84)
T d1l3ka1 5 QLRKLFIGGLSFETTDESLRSHFEQW-GTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA-RPHKVD 73 (84)
T ss_dssp GGGEEEEESCCTTCCHHHHHHHHGGG-SCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHT-CSCEET
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHhh-ccccceeecccccCCCcccEEEEEEcCHHHHHHHHHh-CCCEEC
Confidence 34679999999999999999998754 4789999998542 12455789999999999998764 776654
No 79
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.43 E-value=0.17 Score=36.45 Aligned_cols=65 Identities=14% Similarity=0.297 Sum_probs=52.8
Q ss_pred EEEEecCCCCCHHHHHHHhcccccceeEEEEeecCC-CCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 68 IFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDA-MEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 68 lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~-~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
|.|=++|..+|-.||..+++.+ ..|..++|+++.. -.++-..-+.|.+.++|++-... |+..++.
T Consensus 3 lfV~nLp~~~te~~l~~~F~~~-G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~~-~~~~i~G 68 (77)
T d1uawa_ 3 MFIGGLSWQTTQEGLREYFGQF-GEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ-SRHELDS 68 (77)
T ss_dssp EEEESCCSSCCSHHHHHHHTTT-SCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHHT-TTCCCSS
T ss_pred EEEeCCCCcCCHHHHHHHHHHh-CCcceeeeecccCCCCccceEEEEECCHHHHHHHHHc-CCCEECC
Confidence 6788999999999999999775 3689999998543 23566899999999999998864 8877654
No 80
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.26 E-value=0.3 Score=35.90 Aligned_cols=71 Identities=4% Similarity=0.045 Sum_probs=56.8
Q ss_pred CCCccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCC-CcceEEEEEeCChhhHHHHHhhhcCCcCC
Q 018432 62 NSRSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAM-EDRYSVLIKLVDQLTADEFYSNLNGKRFS 133 (356)
Q Consensus 62 ~~~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~-~~~ymvLikF~s~~~A~eF~~~~ng~~Fn 133 (356)
...++.|.|=.+|..+|-.||..+++.+ ..|..++++++... .++-.+.+.|.+.++|+.-...+|+..+.
T Consensus 5 ~~~~~tlfV~nLp~~~te~~l~~~f~~~-G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~ 76 (98)
T d1x4ha1 5 VTEGKTVFIRNLSFDSEEEALGEVLQQF-GDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEG 76 (98)
T ss_dssp CCCCCCEEEESCCTTCCHHHHHHHHHTT-SCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTT
T ss_pred CCCCCEEEEcCCCCcCCHHHHHHHHhcc-ccceeeeeccccccccccceEEEEEcCHHHHHHHHHHccccccc
Confidence 3456789999999999999999999876 35788888875421 24558999999999999999988866543
No 81
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.24 E-value=0.17 Score=35.49 Aligned_cols=65 Identities=8% Similarity=0.158 Sum_probs=51.2
Q ss_pred EEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCC-CcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 68 IFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAM-EDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 68 lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~-~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
|.|=.+|..+|-.||..+++.+- .|..++++++... .++..+.+.|.+.++|+.-.+ +||..|+.
T Consensus 2 lfV~nLp~~~te~~l~~~F~~~G-~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~g 67 (75)
T d2msta_ 2 IFVGGLSVNTTVEDVKHYFEQFG-KVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINN 67 (75)
T ss_dssp EEEECCCSSCCHHHHHHHHHTTS-CCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTT
T ss_pred EEEeCCCCCCCHHHHHHHHHHhC-CcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECC
Confidence 56778999999999999997752 3666777764421 346679999999999999875 89998865
No 82
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.10 E-value=0.15 Score=38.25 Aligned_cols=69 Identities=10% Similarity=0.187 Sum_probs=52.1
Q ss_pred ccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 65 STCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 65 ~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
...|.|-.+|..+|-.|+..|+..+-.-...+++..+..-..+-.+.++|.+.++|+.-.. .||+.|+.
T Consensus 8 ~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~g 76 (103)
T d2cpya1 8 KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNG 76 (103)
T ss_dssp CCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETT
T ss_pred ceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECC
Confidence 4669999999999999999999877433333455443322345589999999999998874 79998864
No 83
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.52 E-value=0.39 Score=36.65 Aligned_cols=74 Identities=5% Similarity=0.102 Sum_probs=53.3
Q ss_pred CCCCccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCCC
Q 018432 61 PNSRSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSPA 135 (356)
Q Consensus 61 ~~~~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fnsl 135 (356)
|......|.|=++|-.+|-.|+..|++.+-.....+.+..+.....+-.+.++|.+.++|+.=.. .||..++.-
T Consensus 14 ~~~~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR 87 (112)
T d1wela1 14 PHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGNR 87 (112)
T ss_dssp CCCCCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTS
T ss_pred CCCCCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCCE
Confidence 44456789999999999999999999876332222333332222346689999999999987764 799987654
No 84
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.71 E-value=0.59 Score=33.62 Aligned_cols=64 Identities=14% Similarity=0.053 Sum_probs=51.6
Q ss_pred CccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCC
Q 018432 64 RSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFS 133 (356)
Q Consensus 64 ~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fn 133 (356)
...+|.|=.+|..+|-.||.++++.+- .|..+++-+. +-.+.++|.+.+.|..=...+||..+.
T Consensus 7 ~~k~l~V~nLp~~~te~~l~~~F~~~g-~i~~~~~~~~-----rg~afV~f~~~~~A~~Ai~~l~~~~i~ 70 (86)
T d2cpda1 7 SVKILYVRNLMLSTSEEMIEKEFNNIK-PGAVERVKKI-----RDYAFVHFSNREDAVEAMKALNGKVLD 70 (86)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHHHTTS-TTCEEEEEEC-----SSEEEEEESSHHHHHHHHHHHSSEEET
T ss_pred CCCEEEEcCCCCCCCHHHHHHhhcccc-eeeeEEEccc-----cEEEEEEeCCHHHHHHHHHHcCCCEEC
Confidence 346899999999999999999987762 2444555442 337999999999999999999999875
No 85
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.59 E-value=0.43 Score=36.13 Aligned_cols=67 Identities=7% Similarity=0.135 Sum_probs=54.9
Q ss_pred ccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCC-CcceEEEEEeCChhhHHHHHhhhcCCcCC
Q 018432 65 STCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAM-EDRYSVLIKLVDQLTADEFYSNLNGKRFS 133 (356)
Q Consensus 65 ~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~-~~~ymvLikF~s~~~A~eF~~~~ng~~Fn 133 (356)
...|.|=++|..+|-.||..+++.+ ..|.+++|.++... .++-.+.+.|.+.++|+.-.. .||..|+
T Consensus 20 ~~~lfVgnLp~~~te~~L~~~F~~~-G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~ 87 (103)
T d1x4ba1 20 FRKLFIGGLSFETTEESLRNYYEQW-GKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSID 87 (103)
T ss_dssp HTEEEEECCTTCCCHHHHHHHHTSS-CCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEET
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHhh-CcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeEC
Confidence 4679999999999999999999775 56889999985432 356679999999999999876 4777664
No 86
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.40 E-value=0.69 Score=34.49 Aligned_cols=65 Identities=12% Similarity=0.238 Sum_probs=51.1
Q ss_pred CCccEEEEEecCC-CCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhh--hcCCcCC
Q 018432 63 SRSTCIFVVAVPN-YLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSN--LNGKRFS 133 (356)
Q Consensus 63 ~~~~~lciLaVP~-~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~--~ng~~Fn 133 (356)
..+.+|.|-.+|. .+|-.||..++..+ ..|..++++++ +-++.++|.+.++|...... .|+..|.
T Consensus 16 ~~~~~l~v~nLp~~~~te~~l~~~F~~f-G~V~~v~~~~~-----k~~afV~f~~~~~A~~Ai~~~~~~~~~~~ 83 (99)
T d1x4fa1 16 ELGRVIHLSNLPHSGYSDSAVLKLAEPY-GKIKNYILMRM-----KSQAFIEMETREDAMAMVDHCLKKALWFQ 83 (99)
T ss_dssp CCCCEEEEESCCCSSCCSHHHHTTTTTT-SCCSEEEEETT-----TTEEEEECSSHHHHHHHHHHHHHSCCCSS
T ss_pred CCCCEEEEeCCcCCccCHHHHHhhhccc-cceeEEEEeec-----CCcEEEEecchHHHHHHHHHHhcCCceEC
Confidence 3467899999997 48999999998765 46888999874 23899999999999988764 4454554
No 87
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.09 E-value=0.74 Score=32.37 Aligned_cols=67 Identities=10% Similarity=0.136 Sum_probs=52.3
Q ss_pred cEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCC-CcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 66 TCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAM-EDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 66 ~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~-~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
.-|.|=.+|..+|-+||.++++.+ ..|..++++.+... .++-.+.+.|.+.++|+.-.. .||..|+.
T Consensus 3 r~lfV~nLp~~~te~~l~~~F~~~-G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~G 70 (79)
T d1l3ka2 3 KKIFVGGIKEDTEEHHLRDYFEQY-GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNG 70 (79)
T ss_dssp SEEEEECCTTTCCHHHHHHHHTTT-SCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETT
T ss_pred CEEEECCCCCcCCHHHHHHHHHHh-ccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECC
Confidence 347888999999999999999775 45777788775432 245579999999998888875 68887753
No 88
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.93 E-value=0.61 Score=34.00 Aligned_cols=63 Identities=14% Similarity=0.155 Sum_probs=50.6
Q ss_pred ccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 65 STCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 65 ~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
++.|.|=.+|..+|-.||..++..+- +..+.+-+ ++-.+.++|.+.+.|+.=...+||..|..
T Consensus 5 s~~i~V~nLp~~~t~~~l~~lF~~~G--~~~~~~~~-----~kg~afV~f~~~~~A~~Ai~~ln~~~~~G 67 (88)
T d1wg1a_ 5 SSGILVKNLPQDSNCQEVHDLLKDYD--LKYCYVDR-----NKRTAFVTLLNGEQAQNAIQMFHQYSFRG 67 (88)
T ss_dssp CCCEEEESCCSSCCHHHHHHHTCSSC--CCCEEEEG-----GGTEEEECCSCHHHHHHHHHHHTTEEETT
T ss_pred CCEEEEeCCCCccChHHHHHHHHhcC--ceeeeeec-----cCCceEEEECCHHHHHHHHHHhCCCEECC
Confidence 56799999999999999999998874 22233323 23368999999999999999999998863
No 89
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.84 E-value=0.54 Score=35.57 Aligned_cols=66 Identities=17% Similarity=0.272 Sum_probs=52.7
Q ss_pred EEEEecCCCCCHHHHHHHhcccccceeEEEEeecC--CCCcceE-EEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 68 IFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRND--AMEDRYS-VLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 68 lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~--~~~~~ym-vLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
|.|=-+|..||-++|+.-+++. ..+.-+.....+ .-|++|+ +.|.|.+++...+|.+.|+|..|-.
T Consensus 4 vVvRrLPP~Lte~~F~~~l~~~-~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D 72 (91)
T d1uw4a_ 4 VVIRRLPPTLTKEQLQEHLQPM-PEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLD 72 (91)
T ss_dssp EEEEEECTTCCHHHHHHHHCSC-CCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEEC
T ss_pred EEEecCCCCCCHHHHHHHhCCc-CceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEc
Confidence 4566789999999999999874 345566777633 2356665 9999999999999999999999954
No 90
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.81 E-value=0.72 Score=32.48 Aligned_cols=65 Identities=6% Similarity=0.125 Sum_probs=51.1
Q ss_pred EEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCC-CcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 68 IFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAM-EDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 68 lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~-~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
|.|=.+|..+|-.||..+++.+ ..|..++++++..+ .++-...++|.+.++|+.-.. .|+..++.
T Consensus 2 lfV~nl~~~~te~~l~~~F~~~-G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~G 67 (75)
T d1hd0a_ 2 MFIGGLSWDTTKKDLKDYFSKF-GEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNG 67 (75)
T ss_dssp EEEECCCTTCCHHHHHHHHHTT-SCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTT
T ss_pred EEEeCCCCcCCHHHHHHHHHhh-ccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECC
Confidence 5678899999999999998764 46899999985431 235589999999999999876 57666643
No 91
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.78 E-value=0.85 Score=34.10 Aligned_cols=64 Identities=19% Similarity=0.291 Sum_probs=52.9
Q ss_pred cEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCC-CcceEEEEEeCChhhHHHHHhhhcCC
Q 018432 66 TCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAM-EDRYSVLIKLVDQLTADEFYSNLNGK 130 (356)
Q Consensus 66 ~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~-~~~ymvLikF~s~~~A~eF~~~~ng~ 130 (356)
+-|.|=.+|..+|-.||.+++..+ ..|..++|+++..+ .++--..++|.+.++|+.-.+..|+.
T Consensus 11 ~~lfV~nLp~~~te~~l~~~F~~~-G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~~ 75 (103)
T d2cqda1 11 TKIFVGGLPYHTTDASLRKYFEGF-GDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNPI 75 (103)
T ss_dssp SEEEEECCCSSCCHHHHHHHHHTT-SCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSCE
T ss_pred cEEEEeCCCCcCcHHHHHHHHhhc-ccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCCc
Confidence 459999999999999999998764 36999999985421 24557999999999999999988764
No 92
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.33 E-value=1.8 Score=34.60 Aligned_cols=68 Identities=10% Similarity=0.137 Sum_probs=54.6
Q ss_pred CccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCC-CCcceEEEEEeCChhhHHHHHhhhcCCcCC
Q 018432 64 RSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDA-MEDRYSVLIKLVDQLTADEFYSNLNGKRFS 133 (356)
Q Consensus 64 ~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~-~~~~ymvLikF~s~~~A~eF~~~~ng~~Fn 133 (356)
....|.|-++|...|-.+|..+++.+ ..|..++++++.. ..++..+.++|.+.+.|+..... |+..++
T Consensus 96 ~~~~i~V~~lp~~~te~~L~~~f~~~-G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~~-~~~~~~ 164 (183)
T d1u1qa_ 96 TVKKIFVGGIKEDTEEHHLRDYFEQY-GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ-KYHTVN 164 (183)
T ss_dssp CCSEEEEECCCTTCCHHHHHHHHGGG-SCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHTS-SCEEET
T ss_pred ccceeEEccCCCcCCHHHHhhhhccC-CceeeeeeecccccCccceeEEEEECCHHHHHHHHHh-CCCeEC
Confidence 45779999999999999999999876 4588898887432 13567899999999999999864 665543
No 93
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=89.11 E-value=0.11 Score=38.64 Aligned_cols=69 Identities=10% Similarity=0.054 Sum_probs=51.8
Q ss_pred CccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 64 RSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 64 ~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
.+..|.|=.+|..+|-.||..++..+- .|..+++++...-.++-.+.++|.+.++|+.-.. +||..+..
T Consensus 12 ~~~~ifV~nL~~~~te~~l~~~F~~~G-~i~~~~v~~~~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g 80 (91)
T d1fjeb1 12 TPFNLFIGNLNPNKSVAELKVAISELF-AKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALE-LTGLKVFG 80 (91)
T ss_dssp SSEEEEEECCCTTSCHHHHHHHHHHHH-HHHTCCCCEEEEETTTTEEEEEESSHHHHHHHHH-GGGEEETT
T ss_pred CCcEEEEeCccCcchHHHHHHHHhcCC-cEEEeeeeecCCCCccEEeEEeeCCHHHHHHHHh-cCCcEECC
Confidence 456899999999999999999987662 2333444432211346689999999999999984 89998763
No 94
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.94 E-value=0.53 Score=35.72 Aligned_cols=44 Identities=23% Similarity=0.196 Sum_probs=37.7
Q ss_pred cceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 91 DHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 91 ~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
..|.+++|.++.....+--+.++|.+.++|..-...+||+.|+.
T Consensus 52 G~I~~v~I~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~g 95 (104)
T d1jmta_ 52 GEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNG 95 (104)
T ss_dssp CCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTCEETT
T ss_pred CCEEEEEeecCCCCCEeeEEEEEEechhHHHHHHHHHCCCEECC
Confidence 34999999986543457789999999999999999999999975
No 95
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.38 E-value=0.71 Score=34.75 Aligned_cols=65 Identities=15% Similarity=0.243 Sum_probs=54.1
Q ss_pred ccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCC
Q 018432 65 STCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFS 133 (356)
Q Consensus 65 ~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fn 133 (356)
...|.|=.+|..+|-.||.+.++.+ ..|..+++.+. .++-.+.+.|.+.++|..=...+||+.+.
T Consensus 7 ~~~v~V~NL~~~vte~~L~~~F~~~-G~i~~~~i~~~---~~~g~aFV~f~~~e~A~~Ai~~ln~~~l~ 71 (108)
T d2adba1 7 VLRIIVENLFYPVTLDVLHQIFSKF-GTVLKIITFTK---NNQFQALLQYADPVSAQHAKLSLDGQNIY 71 (108)
T ss_dssp EEEEESCSCCSTTHHHHHHHHHTTT-SCEEEEEEEEE---TTEEEEEEEESCHHHHHHHHHHHHSCCSS
T ss_pred eEEEEEeCcCCCCCHHHHHHHHccC-CcEEEEEEEee---CCCCeEEEEECCHHHHHHHHHHHCCCEec
Confidence 4456677999999999999987664 34888888884 25678999999999999999999999874
No 96
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.18 E-value=0.82 Score=32.44 Aligned_cols=58 Identities=14% Similarity=0.241 Sum_probs=47.3
Q ss_pred EEEEecCCCCCHHHHHHHhcccccceeEEEEeecCC-CCcceEEEEEeCChhhHHHHHhh
Q 018432 68 IFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDA-MEDRYSVLIKLVDQLTADEFYSN 126 (356)
Q Consensus 68 lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~-~~~~ymvLikF~s~~~A~eF~~~ 126 (356)
|.|=.+|..+|-.+|.++++.+ ..|..++++++.. -.++--..++|.+.++|+.-...
T Consensus 2 lfVgnLp~~~te~~l~~~F~~~-G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~~ 60 (75)
T d1x0fa1 2 IFVGGLSPDTPEEKIREYFGGF-GEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 60 (75)
T ss_dssp EEEESCCSSCCHHHHHHHHHHH-SCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTTC
T ss_pred EEEcCCCCCCCHHHHHHHHHHh-CCcccccccccccccccccEEEEEECCHHHHHHHHhh
Confidence 5678899999999999998875 5699999998642 12354699999999999998765
No 97
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.53 E-value=1 Score=33.79 Aligned_cols=63 Identities=16% Similarity=0.181 Sum_probs=49.6
Q ss_pred cEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 66 TCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 66 ~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
..|++-++|..+|-.+|...++.+ ..|..+++.++ +-.+.++|.+.++|..-....||+....
T Consensus 21 l~V~ng~L~~~vte~~L~~~F~~~-G~i~~i~~~~~-----k~~aFV~f~~~e~A~~A~~~lng~~i~~ 83 (101)
T d2cq2a1 21 LVVANGGLGNGVSRNQLLPVLEKC-GLVDALLMPPN-----KPYSFARYRTTEESKRAYVTLNGKEVVD 83 (101)
T ss_dssp EEEETCTGGGTCCHHHHHHHHHHH-SCEEEEECCTT-----CSCEEEEESSHHHHHHHHHHTTTCEEEC
T ss_pred EEEECCCCCCCCCHHHHHHHHHhh-CcccEEeeccC-----ccEEEEEECCHHHHHHHHHHhCCCCCCC
Confidence 334445599999999999988654 34777877763 3368999999999999999999998743
No 98
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=84.24 E-value=0.91 Score=33.17 Aligned_cols=62 Identities=3% Similarity=0.076 Sum_probs=49.4
Q ss_pred CccEEEEEecCCC-CCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCc
Q 018432 64 RSTCIFVVAVPNY-LSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKR 131 (356)
Q Consensus 64 ~~~~lciLaVP~~-ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~ 131 (356)
-+.+|.|-.+|.. +|-+||.+++.+ ...|.+++++++.+ .+.+.|.+.++|..-.+.+++.+
T Consensus 7 ~sr~v~v~nl~~~~~t~~eL~~lF~~-fG~I~~i~i~~~k~-----~afV~f~~~~~A~~A~~~l~~~~ 69 (89)
T d1x4da1 7 TRRVVHIMDFQRGKNLRYQLLQLVEP-FGVISNHLILNKIN-----EAFIEMATTEDAQAAVDYYTTTP 69 (89)
T ss_dssp CCCEEEEESCCCSSSHHHHHHTTTGG-GSCEEEEEECSSSS-----CEEEEESSHHHHHHHHHHHHHSC
T ss_pred CCcEEEEECCCCCcCCHHHHHHHHHh-hCCeEEEEeeccce-----EEEEEEcchhhHHHHHHHHhhCC
Confidence 3688999999986 788999998866 34588899988432 58999999999999888765443
No 99
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.28 E-value=3 Score=30.74 Aligned_cols=67 Identities=9% Similarity=0.169 Sum_probs=51.2
Q ss_pred CCCCCccEEEEEecCC-CCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 60 NPNSRSTCIFVVAVPN-YLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 60 ~~~~~~~~lciLaVP~-~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
.|......|.|=.+|. ..+-.||..+++.+ ..|..++|-| -...++|.+.++|+.-...+||+.|..
T Consensus 10 ~~~~~~~~lfV~nL~~~~~~~~~L~~~F~~~-G~i~~~~i~r-------g~aFV~f~~~~~A~~Ai~~lng~~~~g 77 (98)
T d1wf2a_ 10 DPRSMNSRVFIGNLNTLVVKKSDVEAIFSKY-GKIVGCSVHK-------GFAFVQYVNERNARAAVAGEDGRMIAG 77 (98)
T ss_dssp CCSSCCCCEEEEEECTTTCCHHHHHHSSTTS-SCEEEEEEET-------EEEEEEESSHHHHHHHHHTTTTCEETT
T ss_pred CCCCCCcEEEEeCCCcccCCHHHHHHHHhhc-CCEEEEEEeC-------CeEEEEECCHHHHHHHHHHcCCCEECC
Confidence 3444456699999975 56677888877654 4578888744 268999999999999999999998853
No 100
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.23 E-value=2.6 Score=31.40 Aligned_cols=70 Identities=13% Similarity=0.275 Sum_probs=47.8
Q ss_pred ccEEEEEec--CCCCCH--------HHHHHHhcccccceeEEEEeecCCC---CcceEEEEEeCChhhHHHHHhhhcCCc
Q 018432 65 STCIFVVAV--PNYLSS--------DEFVRFCGSHIDHVEELIFIRNDAM---EDRYSVLIKLVDQLTADEFYSNLNGKR 131 (356)
Q Consensus 65 ~~~lciLaV--P~~ms~--------~d~l~F~~~~~~~i~~iriir~~~~---~~~ymvLikF~s~~~A~eF~~~~ng~~ 131 (356)
+.+|+|..+ |.-+.- .|+...+ .....|.+++|.|+... ...-.|.++|.+.++|..-.+.+||+.
T Consensus 4 s~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~-~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr~ 82 (104)
T d1o0pa_ 4 TEVLCLMNMVLPEELLDDEEYEEIVEDVRDEC-SKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRK 82 (104)
T ss_dssp CSEEEEESSCCTTTTTSHHHHHHHHHHHHHHH-TTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSCC
T ss_pred CcEEEEeCCCCHHHcCCchhHHHHHHHHHHHh-cccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCCE
Confidence 577888877 444321 1222222 12456999999874321 123479999999999999999999999
Q ss_pred CCCC
Q 018432 132 FSPA 135 (356)
Q Consensus 132 Fnsl 135 (356)
|+.-
T Consensus 83 f~gR 86 (104)
T d1o0pa_ 83 FANR 86 (104)
T ss_dssp SSSS
T ss_pred ECCe
Confidence 9863
No 101
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.95 E-value=1.2 Score=31.56 Aligned_cols=60 Identities=13% Similarity=0.146 Sum_probs=48.0
Q ss_pred EEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCc-CC
Q 018432 68 IFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKR-FS 133 (356)
Q Consensus 68 lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~-Fn 133 (356)
|.|=.+|..+|-.||..+++.+- .|...++++.. -.+.+.|.+.++|+.-...+||+. |+
T Consensus 4 l~V~nLp~~~te~~L~~~F~~~G-~i~~~~~~~~r-----g~aFV~f~~~~~A~~Ai~~lng~~~~~ 64 (80)
T d2cqha1 4 LYIGNLSPAVTADDLRQLFGDRK-LPLAGQVLLKS-----GYAFVDYPDQNWAIRAIETLSGKVELH 64 (80)
T ss_dssp EEEECCCTTCCHHHHHHHHHHTT-CCCSSCEEEET-----TEEEECCSCHHHHHHHHHHHTTTCEET
T ss_pred EEEECCCCCCCHHHHHHHHHHhC-cEEEeEEeccc-----ceEEEEECCHHHHHHHHHHhCCCeEEC
Confidence 78889999999999999987763 34555566532 258999999999999999999973 54
No 102
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.47 E-value=4 Score=30.75 Aligned_cols=63 Identities=10% Similarity=0.121 Sum_probs=50.1
Q ss_pred cEEEEE-ecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCCh-hhHHHHHhhhcCCcCCC
Q 018432 66 TCIFVV-AVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQ-LTADEFYSNLNGKRFSP 134 (356)
Q Consensus 66 ~~lciL-aVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~-~~A~eF~~~~ng~~Fns 134 (356)
.+|..+ .+|..+|-.||...++.+ ..|..++|+++.+ ..-++|.+. ++|.+-...+|+..+..
T Consensus 11 ~~~~fvgnL~~~~tee~Lk~~F~~f-G~V~~v~i~~~kg-----~gfV~F~~~~~~A~~a~~~~~~~~l~~ 75 (113)
T d1owxa_ 11 CLLKFSGDLDDQTCREDLHILFSNH-GEIKWIDFVRGAK-----EGIILFKEKAKEALGKAKDANNGNLQL 75 (113)
T ss_dssp CEEEEEESCCSSCCHHHHHHHTCSS-CCEEEEECCTTCS-----EEEEEESSCHHHHHHHHHHTTTSCBCT
T ss_pred CeEEEECCCCCCCCHHHHHHHHHhc-CChheEEEecCCc-----eEEEEecCcHHHHHHHHHHhcCCceec
Confidence 566566 599999999999998776 4489999998532 678899885 67888889999988753
No 103
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=76.58 E-value=2.6 Score=30.32 Aligned_cols=63 Identities=14% Similarity=0.172 Sum_probs=47.1
Q ss_pred CccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 64 RSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 64 ~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
+++-|.|-+.|...+ +++|+.+..+ ..|..+++.++ +--+-++|.+.++|+.=.+ +||+.|+.
T Consensus 3 ~~~wV~V~G~p~~~~-~~il~~F~~~-G~I~~~~~~~~-----~~~~fV~f~~~~~A~~Al~-~nG~~~~g 65 (81)
T d1wwha1 3 DDTWVTVFGFPQASA-SYILLQFAQY-GNILKHVMSNT-----GNWMHIRYQSKLQARKALS-KDGRIFGE 65 (81)
T ss_dssp GGGEEEEECCCGGGH-HHHHHHHHTT-SCEEEEEECSS-----SSEEEEEESSHHHHHHHHT-TTTCEETT
T ss_pred cccEEEEECCChHHH-HHHHHHHHhh-hhhheEEecCC-----CCEEEEEEcccHHHHHHHh-cCCCeECC
Confidence 356688999999887 5666665433 34778877663 2367899999999998764 89999865
No 104
>d1rrpb_ b.55.1.3 (B:) Nuclear pore complex protein Nup358 {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.93 E-value=2.8 Score=32.93 Aligned_cols=111 Identities=9% Similarity=-0.006 Sum_probs=58.4
Q ss_pred CCCcccccccc-eeeeccccccc-cc-CCCCceeeeeeEEEEccCCCCCcC--C-CCCCCccEEEEEecCCCCCHHHHHH
Q 018432 11 DNHPITIEEAG-FCTVSSTATRS-RA-NPNPKFSERRGLVHLFRGTSQSYQ--Q-NPNSRSTCIFVVAVPNYLSSDEFVR 84 (356)
Q Consensus 11 ~~~~~~~~~~~-~~~~~s~~~~~-~~-~gnp~v~~~~G~vhl~r~~~~~~~--~-~~~~~~~~lciLaVP~~ms~~d~l~ 84 (356)
+...+..+||+ .-.|...+-+= |. ..+..-+-+.|.+||.++.+.... - ....-..+++=..|...|.+...
T Consensus 10 ~~v~~~tgEE~E~~if~~r~KL~~~~~~~~~WkerGvG~lkil~~~~t~~~RlvmR~d~~~kv~lN~~i~~~~~~~~~-- 87 (134)
T d1rrpb_ 10 DKIEVKTGEEDEEEFFCNRAKLFRFDVESKEWKERGIGNVKILRHKTSGKIRLLMRREQVLKICANHYISPDMKLTPN-- 87 (134)
T ss_dssp CCCCCCCSCCSEEEEEEEEEEEEEECSSSSCEEEEEEEEEEEEEESSSCCCEEEEECTTTCCEEECCBCCSSCCCBCS--
T ss_pred CccceecCccCcEEEEEEeeEEEEEcCCCCceeeeeEEEEEEEEcCCCCcEEEEEEEcCCCcEEEEEEECCCcEEeec--
Confidence 34444444443 44444444443 43 345788999999999998754321 0 01112344444445555544311
Q ss_pred HhcccccceeEEEEeecC---CCCcceEEEEEeCChhhHHHHHhhhc
Q 018432 85 FCGSHIDHVEELIFIRND---AMEDRYSVLIKLVDQLTADEFYSNLN 128 (356)
Q Consensus 85 F~~~~~~~i~~iriir~~---~~~~~ymvLikF~s~~~A~eF~~~~n 128 (356)
...-..++....+ +.+..-+.+|+|.+.+.|++|+..|+
T Consensus 88 -----~~~~~~~~~~~~d~~~~~~k~~~~~lrfk~~e~a~~f~~~~~ 129 (134)
T d1rrpb_ 88 -----AGSDRSFVWHALDYADELPKPEQLAIRFKTPEEAALFKCKFE 129 (134)
T ss_dssp -----TTCTTEEEEEEEECTTSSCEEEEEEEECSSHHHHHHHHHHHH
T ss_pred -----CCCceEEEEEeeccCCCCCcEEEEEEEECCHHHHHHHHHHHH
Confidence 1111112222211 11223357899999999999999875
No 105
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.39 E-value=2.2 Score=30.64 Aligned_cols=55 Identities=18% Similarity=0.249 Sum_probs=43.3
Q ss_pred ccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHH
Q 018432 65 STCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFY 124 (356)
Q Consensus 65 ~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~ 124 (356)
+..|.|=.+|..+|-.||..+++.+- .|..+++.+. ++-.+.++|.+.++|++-.
T Consensus 5 s~~lfV~nLp~~~te~~L~~~F~~~G-~v~~v~~~~~----~~gfafV~f~~~~~a~~a~ 59 (88)
T d1wf0a_ 5 SSGVFVGRCTGDMTEDELREFFSQYG-DVMDVFIPKP----FRAFAFVTFADDQIAQSLC 59 (88)
T ss_dssp CCEEEEESCCSSSCHHHHHHHSTTTS-CCCEEECCSS----CCSCCEEECSCHHHHHHTT
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHcC-CceEEEEeec----cCceEEEEECCHHHHHHHH
Confidence 57899999999999999999998763 4555655442 3446899999999998764
No 106
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.02 E-value=6.4 Score=31.03 Aligned_cols=66 Identities=8% Similarity=0.060 Sum_probs=52.8
Q ss_pred ccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCC-CCcceEEEEEeCChhhHHHHHhhhcCCc
Q 018432 65 STCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDA-MEDRYSVLIKLVDQLTADEFYSNLNGKR 131 (356)
Q Consensus 65 ~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~-~~~~ymvLikF~s~~~A~eF~~~~ng~~ 131 (356)
.+.|.|=.+|..+|-.||..++..+ ..|..++++++.. ..++-...+.|.+.++|..-....+++.
T Consensus 6 ~r~lfV~nLp~~~te~~L~~~F~~~-G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~ 72 (183)
T d1u1qa_ 6 LRKLFIGGLSFETTDESLRSHFEQW-GTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKV 72 (183)
T ss_dssp HHEEEEESCCTTCCHHHHHHHHGGG-SCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCSCEE
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHc-CCEEEEEeeecccCCCccCceecccCCHHHHHHHHHhcCCcc
Confidence 4679999999999999999998664 4689999998532 2345589999999999998887665553
No 107
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=73.42 E-value=4.3 Score=29.86 Aligned_cols=69 Identities=14% Similarity=0.235 Sum_probs=46.7
Q ss_pred CCccEEEEEec--CCCCC-----HHHHHHHhc---ccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcC
Q 018432 63 SRSTCIFVVAV--PNYLS-----SDEFVRFCG---SHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRF 132 (356)
Q Consensus 63 ~~~~~lciLaV--P~~ms-----~~d~l~F~~---~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~F 132 (356)
..+.+|.|-.+ |..+- ..|+..-+. .....|..+++.++. .+--+-++|.+.++|..-...+||+.|
T Consensus 6 ~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~~---~~G~~fV~f~~~e~A~~A~~~lng~~~ 82 (99)
T d2dita1 6 RHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRH---PDGVASVSFRDPEEADYCIQTLDGRWF 82 (99)
T ss_dssp CSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETTC---TTCEEEEECSCHHHHHHHHHHSTTCEE
T ss_pred CCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCCC---CccEEEEEECCHHHHHHHHHHhCCcEE
Confidence 45777888776 33221 112222221 124568888887753 244799999999999999999999999
Q ss_pred CC
Q 018432 133 SP 134 (356)
Q Consensus 133 ns 134 (356)
+.
T Consensus 83 ~g 84 (99)
T d2dita1 83 GG 84 (99)
T ss_dssp TT
T ss_pred CC
Confidence 75
No 108
>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}
Probab=69.27 E-value=0.83 Score=28.80 Aligned_cols=16 Identities=31% Similarity=1.016 Sum_probs=12.8
Q ss_pred CceeeeccccceeccC
Q 018432 228 ENLWVCLICGFVGCGR 243 (356)
Q Consensus 228 ~nlWiCL~CG~vGCgr 243 (356)
+..|+|.+||++.=|.
T Consensus 3 ~~~~vC~vCGyi~~g~ 18 (36)
T d1yuza2 3 DKFHLCPICGYIHKGE 18 (36)
T ss_dssp CCEEECSSSCCEEESS
T ss_pred CCEEECCCCCCEeeCC
Confidence 4689999999986553
No 109
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.33 E-value=2.4 Score=27.64 Aligned_cols=32 Identities=25% Similarity=0.574 Sum_probs=21.8
Q ss_pred CCCccccccCCCCcceeeecCCCccchhhhhcc
Q 018432 169 TCPICLERLDPDTSGILSTICDHSFQCSCTAKW 201 (356)
Q Consensus 169 tCpICLe~ld~~~sgilt~~C~H~FH~~Cl~kW 201 (356)
.|.||-..-+.+ .-+.--.|+..||..|+..-
T Consensus 2 ~C~vC~~~~~~~-~~i~Cd~C~~~~H~~C~~p~ 33 (51)
T d1f62a_ 2 RCKVCRKKGEDD-KLILCDECNKAFHLFCLRPA 33 (51)
T ss_dssp CCTTTCCSSCCS-CCEECTTTCCEECHHHHCTT
T ss_pred CCcCcCCCCCCC-CEEEcCCCCCCCCCCCCCCC
Confidence 688997665443 22344577899999998654
No 110
>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=64.41 E-value=1.2 Score=28.19 Aligned_cols=16 Identities=25% Similarity=1.007 Sum_probs=12.8
Q ss_pred CceeeeccccceeccC
Q 018432 228 ENLWVCLICGFVGCGR 243 (356)
Q Consensus 228 ~nlWiCL~CG~vGCgr 243 (356)
+..|+|.+||++.=|.
T Consensus 3 ~~~~~C~vCG~i~~g~ 18 (37)
T d1nnqa2 3 KKVYICPICGYTAVDE 18 (37)
T ss_dssp SCEEECTTTCCEEESC
T ss_pred CcEEECCCCCCEecCC
Confidence 5689999999986553
No 111
>d2akla2 g.41.3.5 (A:3-40) Hypothetical protein PA0128, N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=64.02 E-value=1.9 Score=27.37 Aligned_cols=22 Identities=32% Similarity=0.750 Sum_probs=15.8
Q ss_pred CCcccccCCC-----Cceeeeccccce
Q 018432 218 RPTCSVCGTV-----ENLWVCLICGFV 239 (356)
Q Consensus 218 ~~~C~~C~~~-----~nlWiCL~CG~v 239 (356)
.+.|..|+.. +++|||..|||.
T Consensus 3 lP~CP~C~seytYedg~l~vCPeC~hE 29 (38)
T d2akla2 3 LPPCPQCNSEYTYEDGALLVCPECAHE 29 (38)
T ss_dssp SCCCTTTCCCCCEECSSSEEETTTTEE
T ss_pred CCcCCCCCCcceEcCCCEEECCcccCc
Confidence 3456666653 579999999984
No 112
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.40 E-value=1.5 Score=31.53 Aligned_cols=67 Identities=9% Similarity=0.152 Sum_probs=45.1
Q ss_pred EEEEEecCCCCCHHHHHHHhcccc--cc--eeEEEEee-cCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 67 CIFVVAVPNYLSSDEFVRFCGSHI--DH--VEELIFIR-NDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 67 ~lciLaVP~~ms~~d~l~F~~~~~--~~--i~~iriir-~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
-|.|=.+|..+|-.||.++++.+- .. +.....+. .+...++-.+.+.|.+.++|+.-. .+||..|..
T Consensus 3 rlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~-~l~g~~~~G 74 (90)
T d1u2fa_ 3 RLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAM-AFDGIIFQG 74 (90)
T ss_dssp EEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGG-GGSSCCSSS
T ss_pred EEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHH-hhCCcEECC
Confidence 477889999999999999987641 11 11111111 111123446999999999998865 599999865
No 113
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=62.12 E-value=6.4 Score=29.20 Aligned_cols=64 Identities=16% Similarity=0.226 Sum_probs=46.6
Q ss_pred ccEEEEEecCCCCCHH-----HHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCCcCCC
Q 018432 65 STCIFVVAVPNYLSSD-----EFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGKRFSP 134 (356)
Q Consensus 65 ~~~lciLaVP~~ms~~-----d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~~Fns 134 (356)
+..|.|-.++..+.-. +|..++.. ...|.++++++. +-.+.+.|.+.++|..-...+||..|..
T Consensus 5 ~~~L~v~nl~~~v~~~d~~k~~l~~lF~~-~G~i~~~~~~k~-----~~~afV~f~~~~~A~~Ai~~lng~~~~g 73 (104)
T d1weya_ 5 SSGLIACVANDDVFSESETRAKFESLFRT-YDKDTTFQYFKS-----FKRVRINFSNPLSAADARLRLHKTEFLG 73 (104)
T ss_dssp CCEEEEECCCGGGGSTTTHHHHHHHHHHT-TCSSCEEEEETT-----TTEEEEECSSTTHHHHHHHTSTTSEETT
T ss_pred CceEEEEeCCchhcCcHHHHHHHHHHhcc-cccceEEEEecC-----CCEEEEEECCHHHHHHHHHHhcccccCC
Confidence 3557787777765332 24444333 345888999873 2269999999999999999999999874
No 114
>d1k5db_ b.55.1.3 (B:) Ran-binding protein 1, Ranbp1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=61.88 E-value=7.4 Score=30.84 Aligned_cols=84 Identities=8% Similarity=0.099 Sum_probs=49.2
Q ss_pred CCCceeeeeeEEEEccCCCCCcC-----CCCCCCccEEEEEecCCCCCHHHHHHHhcccccceeEEEE-ee-c--CCCCc
Q 018432 36 PNPKFSERRGLVHLFRGTSQSYQ-----QNPNSRSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIF-IR-N--DAMED 106 (356)
Q Consensus 36 gnp~v~~~~G~vhl~r~~~~~~~-----~~~~~~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iri-ir-~--~~~~~ 106 (356)
++..-+-+.|.+||.++...... ..+ -..+++=..|...|.+. +....-..+.. .. + +..+.
T Consensus 43 ~~~WkerGvG~lkilk~k~t~~~RllmR~d~--~~kv~lN~~i~~~m~~~-------~~~~~~~~~~~~~~~d~~~~~~k 113 (146)
T d1k5db_ 43 LPEWKERGTGDVKLLKHKEKGAIRLLMRRDK--TLKICANHYITPMMELK-------PNAGSDRAWVWNTHADFADECPK 113 (146)
T ss_dssp SCCEEEEEEEEEEEEECSSSCCEEEEEEETT--TCCEEEEEECCSSCCCC-------BCSSCSSEEEEEEEEECTTSSCE
T ss_pred CCCccceeEEEEEEEEcCCCCeEEEEEEEcC--CCcEEEEeEecCCceec-------ccCCCceeEEEEecCCCccCCCc
Confidence 35789999999999987654321 112 23555555666666443 11111111111 11 1 11222
Q ss_pred ceEEEEEeCChhhHHHHHhhhc
Q 018432 107 RYSVLIKLVDQLTADEFYSNLN 128 (356)
Q Consensus 107 ~ymvLikF~s~~~A~eF~~~~n 128 (356)
.-+.+|+|.+.+.|++|+..++
T Consensus 114 ~~~~~irfk~~e~a~~f~~~~~ 135 (146)
T d1k5db_ 114 PELLAIRFLNAENAQKFKTKFE 135 (146)
T ss_dssp EEEEEEECSSHHHHHHHHHHHH
T ss_pred eEEEEEEECCHHHHHHHHHHHH
Confidence 3367999999999999998875
No 115
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=58.15 E-value=3.4 Score=28.12 Aligned_cols=34 Identities=24% Similarity=0.455 Sum_probs=23.0
Q ss_pred CCCCCCccccccCCCCcceeeecCCCccchhhhh
Q 018432 166 ELPTCPICLERLDPDTSGILSTICDHSFQCSCTA 199 (356)
Q Consensus 166 elptCpICLe~ld~~~sgilt~~C~H~FH~~Cl~ 199 (356)
..-.|++|.+..+++..-|.=-.|+..||..|+.
T Consensus 5 ~~~~C~~C~~~~~~~~~~I~Cd~C~~w~H~~C~~ 38 (64)
T d1we9a_ 5 SSGQCGACGESYAADEFWICCDLCEMWFHGKCVK 38 (64)
T ss_dssp SCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTT
T ss_pred CCCcCcCcCCCCCCCCCEEEcCCCCccCCcccCC
Confidence 3458999988766542212234678999999984
No 116
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.71 E-value=12 Score=27.45 Aligned_cols=41 Identities=20% Similarity=0.460 Sum_probs=28.2
Q ss_pred CCCCCCCCCCCCccccccCCCCcceeeecCCCccchhhhhccc
Q 018432 160 PPAGFTELPTCPICLERLDPDTSGILSTICDHSFQCSCTAKWT 202 (356)
Q Consensus 160 ~~~~~~elptCpICLe~ld~~~sgilt~~C~H~FH~~Cl~kW~ 202 (356)
|.........|+|| +-...+ +-+---.|...||..|+.+-.
T Consensus 8 ~re~v~~D~mC~vC-~v~t~~-~l~pCRvCtRv~H~~CL~r~g 48 (89)
T d1wila_ 8 PREPVVNDEMCDVC-EVWTAE-SLFPCRVCTRVFHDGCLRRMG 48 (89)
T ss_dssp SCCCCCCSCCCTTT-CCCCSS-CCSSCSSSSSCCCHHHHHHHT
T ss_pred cccCCCcCcccccc-Cccccc-ceecceeecchhhHHHHHHhc
Confidence 44455678899999 555543 223334678999999998764
No 117
>d2fiua1 d.58.4.16 (A:1-95) Hypothetical protein Atu0297 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=52.61 E-value=5.1 Score=29.43 Aligned_cols=20 Identities=20% Similarity=0.253 Sum_probs=17.6
Q ss_pred cceEEEEEeCChhhHHHHHh
Q 018432 106 DRYSVLIKLVDQLTADEFYS 125 (356)
Q Consensus 106 ~~ymvLikF~s~~~A~eF~~ 125 (356)
...+|+++|+|.+.|.+||+
T Consensus 51 ~~~~viieFps~e~A~~~~~ 70 (95)
T d2fiua1 51 RARNVVIEFPSVQHAIDCYN 70 (95)
T ss_dssp CSEEEEEEESSHHHHHHHHH
T ss_pred CceEEEEEcCCHHHHHHHHC
Confidence 34589999999999999986
No 118
>d1xkea1 b.55.1.3 (A:7-124) Ran-binding protein 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.96 E-value=22 Score=26.68 Aligned_cols=85 Identities=7% Similarity=0.023 Sum_probs=46.6
Q ss_pred CCceeeeeeEEEEccCCCCCcC--C-CCCCCccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeec---CCCCcceEE
Q 018432 37 NPKFSERRGLVHLFRGTSQSYQ--Q-NPNSRSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRN---DAMEDRYSV 110 (356)
Q Consensus 37 np~v~~~~G~vhl~r~~~~~~~--~-~~~~~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~---~~~~~~ymv 110 (356)
+-.-+-+.|.+|+.++.+.... - ...+...+++=..|...|.+.. ....-..++..-. ++.+..-..
T Consensus 19 ~~WkerG~G~lkilk~~~~~~~RlvmR~d~~~kv~lN~~i~~~~~~~~-------~~~~~~~~~~~~~d~~~~~~~~~~~ 91 (118)
T d1xkea1 19 SQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKP-------LSGSDRAWMWLASDFSDGDAKLEQL 91 (118)
T ss_dssp TEEEEEEEEEEEEEEETTSSCEEEEEEETTTTEEEEEEECCTTSCEEE-------CTTCSSCEEEEEEECSSSCSEEEEE
T ss_pred CChhHhceeEEEEEEeCCCCcEEEEEEECCCCcEEEEeEEcCCCcccc-------ccCCceEEEEeccccCCCCCceEEE
Confidence 3477889999999988654321 0 0111234555555555553321 1111111221111 111223468
Q ss_pred EEEeCChhhHHHHHhhhc
Q 018432 111 LIKLVDQLTADEFYSNLN 128 (356)
Q Consensus 111 LikF~s~~~A~eF~~~~n 128 (356)
+|+|.+++.|++|+..|+
T Consensus 92 ~lrfk~~e~a~~f~~~~~ 109 (118)
T d1xkea1 92 AAKFKTPELAEEFKQKFE 109 (118)
T ss_dssp EEECSSHHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHH
Confidence 999999999999998775
No 119
>d1lkoa2 g.41.5.1 (A:148-191) Rubrerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}
Probab=45.06 E-value=3.8 Score=26.71 Aligned_cols=26 Identities=31% Similarity=0.687 Sum_probs=18.3
Q ss_pred ceeeeccccceeccCC------CCcHHhhhhh
Q 018432 229 NLWVCLICGFVGCGRY------KEGHAVRHWK 254 (356)
Q Consensus 229 nlWiCL~CG~vGCgr~------~~~HA~~H~~ 254 (356)
..|+|+.||++.-|.. .-+|...+|+
T Consensus 7 ~~W~C~~CGyi~~g~~aP~~CPvC~~p~~~Fe 38 (44)
T d1lkoa2 7 TKWRCRNCGYVHEGTGAPELCPACAHPKAHFE 38 (44)
T ss_dssp EEEEETTTCCEEEEEECCSBCTTTCCBGGGEE
T ss_pred eEEEcCCCCcEEECCCCCCcCCCCCCcHHHHe
Confidence 4899999999987653 2455555554
No 120
>d1dcqa2 g.45.1.1 (A:247-368) Pyk2-associated protein beta ARF-GAP domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=41.74 E-value=7.4 Score=30.07 Aligned_cols=53 Identities=17% Similarity=0.339 Sum_probs=36.9
Q ss_pred cCCCCcccccCCCCceeeeccccceeccCCCCcHHhhhhhhcCCeeeEeCCCceEEE
Q 018432 215 QDERPTCSVCGTVENLWVCLICGFVGCGRYKEGHAVRHWKDTQHWYSLDLRTQQIWD 271 (356)
Q Consensus 215 ~~~~~~C~~C~~~~nlWiCL~CG~vGCgr~~~~HA~~H~~~t~H~~al~l~t~~Vwc 271 (356)
.|.+..|.+|+..+..|+++.-|-.-|. .-|--|=.-..|---+..-+.+.|.
T Consensus 12 ~p~N~~CaDC~~~~p~w~s~n~GvfvC~----~CsgiHR~lg~~is~VkS~~ld~w~ 64 (122)
T d1dcqa2 12 MTGNDVCCDCGAPDPTWLSTNLGILTCI----ECSGIHRELGVHYSRMQSLTLDVLG 64 (122)
T ss_dssp STTTTBCTTTCCBSCCEEETTTTEEECH----HHHHHHHHHCTTTCCEEETTTSCCC
T ss_pred CCCCCccCCCCCCCCCeEEecCCEEEch----hhhHHHhcCCCCceEeeecccCCCC
Confidence 4677899999999999999999999886 4566673333453333333455564
No 121
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=41.42 E-value=13 Score=26.13 Aligned_cols=29 Identities=21% Similarity=0.574 Sum_probs=20.3
Q ss_pred CCCCCccccccCCCCcceeee---cCCCccchhhh
Q 018432 167 LPTCPICLERLDPDTSGILST---ICDHSFQCSCT 198 (356)
Q Consensus 167 lptCpICLe~ld~~~sgilt~---~C~H~FH~~Cl 198 (356)
.-.| ||-...+.+ ..+.. .|..-||..|+
T Consensus 16 ~~~C-~C~~~~~~~--~~i~c~c~~C~~W~H~~Cv 47 (78)
T d1wewa_ 16 KVRC-VCGNSLETD--SMIQCEDPRCHVWQHVGCV 47 (78)
T ss_dssp CCCC-SSCCCCCCS--CEEECSSTTTCCEEEHHHH
T ss_pred ccEe-ECCCccCCC--cEEEEeCCCCCcCCCcccc
Confidence 3467 898877643 23333 48899999998
No 122
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=38.35 E-value=6.6 Score=28.18 Aligned_cols=34 Identities=12% Similarity=0.383 Sum_probs=21.9
Q ss_pred CCCCCccccccCCCCccee-eecCCCccchhhhhc
Q 018432 167 LPTCPICLERLDPDTSGIL-STICDHSFQCSCTAK 200 (356)
Q Consensus 167 lptCpICLe~ld~~~sgil-t~~C~H~FH~~Cl~k 200 (356)
..+|.||......+...++ =-.|+..||..|+..
T Consensus 16 ~~~C~iC~~~~~~~~~~~v~Cd~C~~~~H~~C~~p 50 (88)
T d1weva_ 16 GLACVVCRQMTVASGNQLVECQECHNLYHQDCHKP 50 (88)
T ss_dssp CCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSS
T ss_pred cCCccCCCCccCCCCCeEEEcCCCCCccccccCCC
Confidence 4579999865443322222 346788999999863
No 123
>d1exta2 g.24.1.1 (A:72-115) Tumor necrosis factor (TNF) receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.68 E-value=3.4 Score=26.71 Aligned_cols=25 Identities=44% Similarity=0.796 Sum_probs=16.8
Q ss_pred cccccccccccCCCCccc-----ccCCCCc
Q 018432 205 SCQVCRFCHQQDERPTCS-----VCGTVEN 229 (356)
Q Consensus 205 sCPvCR~~~~~~~~~~C~-----~C~~~~n 229 (356)
+|.-||+.+++.+.+.|. +||-.+|
T Consensus 1 sCs~CRkem~QveispCt~~rdTVCGCrkN 30 (44)
T d1exta2 1 SCSKCRKEMGQVEISSCTVDRDTVCGCRKN 30 (44)
T ss_dssp ECCCCCGGGTCEEEECCBTTBCCEEECCTT
T ss_pred ChhHHHHHHhceeeccccccCcceecccch
Confidence 588899888777666663 4555444
No 124
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.61 E-value=15 Score=24.48 Aligned_cols=32 Identities=16% Similarity=0.460 Sum_probs=20.2
Q ss_pred CCCCCCccccccCCCCcceeeecCCCccchhhhhcc
Q 018432 166 ELPTCPICLERLDPDTSGILSTICDHSFQCSCTAKW 201 (356)
Q Consensus 166 elptCpICLe~ld~~~sgilt~~C~H~FH~~Cl~kW 201 (356)
...-|.+|.+. + .-+.=-.|+-.||..|+...
T Consensus 8 ~~~~C~~C~~~---g-~lv~Cd~C~~~~H~~C~~~~ 39 (61)
T d1mm2a_ 8 HMEFCRVCKDG---G-ELLCCDTCPSSYHIHCLNPP 39 (61)
T ss_dssp SCSSCTTTCCC---S-SCBCCSSSCCCBCSSSSSSC
T ss_pred CcCCCcCCCCC---C-eEEEeCCCCccCchhhcCCC
Confidence 34468899742 1 22333467889999998543
No 125
>d1evha_ b.55.1.4 (A:) Enabled {Mouse (Mus musculus) [TaxId: 10090]}
Probab=32.96 E-value=9.6 Score=28.69 Aligned_cols=71 Identities=17% Similarity=0.196 Sum_probs=45.0
Q ss_pred eeEEEEccCCCCCcC---CCCCCCccEEEEEecCCCCCHHHHHHHhcccccceeEEEEeecCCCCcceEEEEEeCChhhH
Q 018432 44 RGLVHLFRGTSQSYQ---QNPNSRSTCIFVVAVPNYLSSDEFVRFCGSHIDHVEELIFIRNDAMEDRYSVLIKLVDQLTA 120 (356)
Q Consensus 44 ~G~vhl~r~~~~~~~---~~~~~~~~~lciLaVP~~ms~~d~l~F~~~~~~~i~~iriir~~~~~~~ymvLikF~s~~~A 120 (356)
.|.|+++++...... -.......+++=-.|...|.+..- .+...+. . + .+++.-|+|.+++.|
T Consensus 31 ~~~v~il~~~~~~~~Rivmrr~~~~kv~~N~~i~~~~~y~~~-------~~~~~~w---~-~---~~~~fglrF~~~e~A 96 (111)
T d1evha_ 31 FSRVHIYHHTGNNTFRVVGRKIQDHQVVINCAIPKGLKYNQA-------TQTFHQW---R-D---ARQVYGLNFGSKEDA 96 (111)
T ss_dssp CEEEEEEEETTTTEEEEEEEETTTCCEEEEEEECTTCCCBCC-------SSSEEEE---E-C---SSCEEEEEESSHHHH
T ss_pred eEEEEEEEeCCCCEEEEEEEEccCCeEEEEEeccCccceecC-------CCceEEE---e-c---CceEEEEEcCCHHHH
Confidence 467999998754321 111234677887788888866421 1222222 2 2 235778999999999
Q ss_pred HHHHhhhc
Q 018432 121 DEFYSNLN 128 (356)
Q Consensus 121 ~eF~~~~n 128 (356)
++|+..+.
T Consensus 97 ~~F~~~v~ 104 (111)
T d1evha_ 97 NVFASAMM 104 (111)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998764
No 126
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=32.92 E-value=29 Score=24.15 Aligned_cols=37 Identities=22% Similarity=0.484 Sum_probs=23.6
Q ss_pred CCCCCCCCCccccccCCCCcceeeecCCCccchhhhh
Q 018432 163 GFTELPTCPICLERLDPDTSGILSTICDHSFQCSCTA 199 (356)
Q Consensus 163 ~~~elptCpICLe~ld~~~sgilt~~C~H~FH~~Cl~ 199 (356)
+....|.+-||....+.+..=|.=-.|+--||..|+.
T Consensus 7 ~~~~~pv~CiC~~~~~~~~~mI~Cd~C~~W~H~~C~g 43 (79)
T d1wepa_ 7 GMALVPVYCLCRQPYNVNHFMIECGLCQDWFHGSCVG 43 (79)
T ss_dssp CCCCCCCCSTTSCSCCSSSCEEEBTTTCCEEEHHHHT
T ss_pred CCCcCCeEeECCCccCCCCcEEECCCCCCcEeccccC
Confidence 3344677779998766542212234567889999984
No 127
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.87 E-value=28 Score=23.74 Aligned_cols=18 Identities=17% Similarity=0.589 Sum_probs=13.5
Q ss_pred eeeecCCCccchhhhhcc
Q 018432 184 ILSTICDHSFQCSCTAKW 201 (356)
Q Consensus 184 ilt~~C~H~FH~~Cl~kW 201 (356)
+.=-.|...||..|+...
T Consensus 20 l~Cd~C~~~~H~~C~~p~ 37 (70)
T d1fp0a1 20 VMCNQCEFCFHLDCHLPA 37 (70)
T ss_dssp EECTTSSCEECTTSSSTT
T ss_pred EECCCCChhhccccCCCC
Confidence 333568899999999754
No 128
>d2q66a2 d.218.1.3 (A:5-201) Poly(A) polymerase, PAP, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=31.82 E-value=38 Score=28.00 Aligned_cols=63 Identities=17% Similarity=0.323 Sum_probs=43.1
Q ss_pred eeEEEEccCCCCCcCCCCCCCccEEEEEecCCCCCHHHHHHHhccc---ccceeEEEEeecCCCCcceEEEEEe
Q 018432 44 RGLVHLFRGTSQSYQQNPNSRSTCIFVVAVPNYLSSDEFVRFCGSH---IDHVEELIFIRNDAMEDRYSVLIKL 114 (356)
Q Consensus 44 ~G~vhl~r~~~~~~~~~~~~~~~~lciLaVP~~ms~~d~l~F~~~~---~~~i~~iriir~~~~~~~ymvLikF 114 (356)
.|.|+.|=.-. .....|.+|--++|+ .|.+++..||+..+... ...+.++..|.+...| +|||
T Consensus 77 ~~~v~~fGS~~-lg~~~p~SDID~~~~--~p~~~~~~~ff~~l~~~L~~~~~v~~i~~I~~A~VP-----IIK~ 142 (197)
T d2q66a2 77 GGKIFTYGSYR-LGVHGPGSDIDTLVV--VPKHVTREDFFTVFDSLLRERKELDEIAPVPDAFVP-----IIKI 142 (197)
T ss_dssp BCEEEEEHHHH-HTCCCTTCCEEEEEE--ECTTCCHHHHHHHHHHHHHTCTTEEEEEEECSSSSC-----EEEE
T ss_pred CcEEEeccccc-ccccCCCCCcceEEe--cCCcCCHHHHHHHHHHHHHhCCCCceeEEeeccccc-----EEEE
Confidence 45566663211 123567777776665 59999999999877654 3468889888876666 7788
No 129
>d1dl6a_ g.41.3.1 (A:) Transcription initiation factor TFIIB, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.35 E-value=18 Score=24.48 Aligned_cols=22 Identities=32% Similarity=0.578 Sum_probs=13.1
Q ss_pred CCcccccCCCC-------ceeeeccccce
Q 018432 218 RPTCSVCGTVE-------NLWVCLICGFV 239 (356)
Q Consensus 218 ~~~C~~C~~~~-------nlWiCL~CG~v 239 (356)
..+|..|+... .-.+|-.||.|
T Consensus 11 ~~~Cp~Cgs~~ii~D~~~Ge~vC~~CG~V 39 (58)
T d1dl6a_ 11 RVTCPNHPDAILVEDYRAGDMICPECGLV 39 (58)
T ss_dssp CCSBTTBSSSCCEECSSSCCEECTTTCCE
T ss_pred ccCCCCCCCCCEEEECCCCcEecccCCCE
Confidence 44566665442 34578778776
No 130
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=27.16 E-value=14 Score=25.26 Aligned_cols=31 Identities=16% Similarity=0.312 Sum_probs=19.1
Q ss_pred CCCCccccccCCCCcceeeecCCCccchhhhh
Q 018432 168 PTCPICLERLDPDTSGILSTICDHSFQCSCTA 199 (356)
Q Consensus 168 ptCpICLe~ld~~~sgilt~~C~H~FH~~Cl~ 199 (356)
..| ||....+....-|.=-.|+..||..|+.
T Consensus 17 ~~C-~C~~~~~~~~~mv~Cd~C~~w~H~~C~g 47 (72)
T d1weea_ 17 VDC-KCGTKDDDGERMLACDGCGVWHHTRCIG 47 (72)
T ss_dssp ECC-TTCCCSCCSSCEEECSSSCEEEETTTTT
T ss_pred EEe-eCCCCcCCCCeEEEeCCCCCcCchhhcC
Confidence 457 7876655442223334677889988873
No 131
>d1iuja_ d.58.4.5 (A:) Hypothetical protein TT1380 {Thermus thermophilus [TaxId: 274]}
Probab=25.65 E-value=46 Score=23.69 Aligned_cols=36 Identities=11% Similarity=0.118 Sum_probs=29.7
Q ss_pred ccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHh
Q 018432 90 IDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYS 125 (356)
Q Consensus 90 ~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~ 125 (356)
...-..+++.|....|++|+++.+++|.++-+.|..
T Consensus 32 ~pG~~~~~l~r~~~~~~~~~~~~~W~s~ea~~a~~~ 67 (102)
T d1iuja_ 32 MPGFIRNLVLRPKNPGDPYVVMTLWESEEAFRAWTE 67 (102)
T ss_dssp STTEEEEEEEEESSTTSCEEEEEEESCHHHHHHHHT
T ss_pred CcCceEEEEEcCCCCCceEEEEEEECCHHHHHHHhc
Confidence 345778888887667999999999999998888755
No 132
>d2od4a1 d.58.4.20 (A:1-100) Hypothetical protein GOS_3280838 {environmental samples}
Probab=23.48 E-value=39 Score=24.85 Aligned_cols=55 Identities=16% Similarity=0.169 Sum_probs=39.0
Q ss_pred CCCCCHHHHHHHhccc------ccceeEEEEeecCCCCcceEEEEEeCChhhHHHHHhhhcCC
Q 018432 74 PNYLSSDEFVRFCGSH------IDHVEELIFIRNDAMEDRYSVLIKLVDQLTADEFYSNLNGK 130 (356)
Q Consensus 74 P~~ms~~d~l~F~~~~------~~~i~~iriir~~~~~~~ymvLikF~s~~~A~eF~~~~ng~ 130 (356)
|+-|.-.-++.|+... ........+++.+ +|+.+++..|+|.++|+.....+...
T Consensus 18 ~sel~~~m~~~~~~~~~~~~~~~~G~l~~~~~~iS--en~~~~I~~fpdK~tAdk~~~~~~~~ 78 (100)
T d2od4a1 18 QSKLQFDMTVTYFENVWSPKVISLGAISAEFVQSN--ENSGMYIIHYPDKQTAISVFDKIKPE 78 (100)
T ss_dssp SSHHHHHHHHHHHHHTHHHHHHHHTCSEEEEEEEE--TTEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcchhhhhCCCeEEEEEEec--CCeEEEEEEeCCHHHHHHHHHHHHHH
Confidence 3444444455555432 3567788888865 78999999999999999987766543
No 133
>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.95 E-value=27 Score=24.82 Aligned_cols=25 Identities=32% Similarity=0.808 Sum_probs=18.0
Q ss_pred CCcccccCCCCce--eeeccccceeccC
Q 018432 218 RPTCSVCGTVENL--WVCLICGFVGCGR 243 (356)
Q Consensus 218 ~~~C~~C~~~~nl--WiCL~CG~vGCgr 243 (356)
..+|..|...-.| +.| .||...|++
T Consensus 25 ~~RC~~C~KKl~l~~~~C-rCg~~FC~~ 51 (74)
T d1wfla_ 25 KNRCFMCRKKVGLTGFDC-RCGNLFCGL 51 (74)
T ss_dssp TTBCSSSCCBCGGGCEEC-TTSCEECSS
T ss_pred CCcChhhCCcccceeeEc-cCCCEehhh
Confidence 4578888765443 677 599999974
No 134
>d1wffa_ g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.78 E-value=25 Score=25.66 Aligned_cols=24 Identities=33% Similarity=0.841 Sum_probs=17.8
Q ss_pred CcccccCCCCce---eeeccccceeccC
Q 018432 219 PTCSVCGTVENL---WVCLICGFVGCGR 243 (356)
Q Consensus 219 ~~C~~C~~~~nl---WiCL~CG~vGCgr 243 (356)
.+|..|...-.| +-| .||...|.+
T Consensus 26 ~RC~~C~KKl~l~~~~~C-rCg~~FC~~ 52 (85)
T d1wffa_ 26 KHCFLCGKKTGLATSFEC-RCGNNFCAS 52 (85)
T ss_dssp CBCSSSCCBCSSSSCEEC-TTCCEECTT
T ss_pred CcChhcCCeecCCcCeec-CCCCEehhh
Confidence 478888766543 678 599999974
No 135
>d1q79a2 d.218.1.3 (A:19-214) Poly(A) polymerase, PAP, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=22.37 E-value=49 Score=27.24 Aligned_cols=64 Identities=16% Similarity=0.227 Sum_probs=42.6
Q ss_pred eeeEEEEccCCCCCcCCCCCCCccEEEEEecCCCCCHHHHHHHhccc---ccceeEEEEeecCCCCcceEEEEEe
Q 018432 43 RRGLVHLFRGTSQSYQQNPNSRSTCIFVVAVPNYLSSDEFVRFCGSH---IDHVEELIFIRNDAMEDRYSVLIKL 114 (356)
Q Consensus 43 ~~G~vhl~r~~~~~~~~~~~~~~~~lciLaVP~~ms~~d~l~F~~~~---~~~i~~iriir~~~~~~~ymvLikF 114 (356)
..|.|+.|=.- ...+..|.+|--++|+. |.+++..+|+..+... ...+..++.|.....| +|||
T Consensus 75 ~~~~v~~FGS~-~lgv~~p~SDID~~~i~--p~~~~~~~ff~~l~~~L~~~~~v~~v~~I~~A~VP-----iiK~ 141 (196)
T d1q79a2 75 VGGKIFTFGSY-RLGVHTKGADIDALCVA--PRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVP-----VIKL 141 (196)
T ss_dssp CBCEEEEEHHH-HHTCCCTTCCEEEEEEE--CTTSCHHHHTTHHHHHHHTCTTEEEEEEETTSSSC-----EEEE
T ss_pred CCcEEEEeccc-cccccCCCCCccEEEec--CCcCCHHHHHHHHHHHHhcCCCcceEEEecccccc-----EEEE
Confidence 35566666321 11345677777766654 9999999998755443 3468899999866666 7777
No 136
>d2j0151 g.41.8.5 (5:2-60) Ribosomal protein L32p {Thermus thermophilus [TaxId: 274]}
Probab=20.27 E-value=22 Score=24.08 Aligned_cols=24 Identities=25% Similarity=0.635 Sum_probs=16.8
Q ss_pred cCCCCcccccCCCC-ceeeeccccc
Q 018432 215 QDERPTCSVCGTVE-NLWVCLICGF 238 (356)
Q Consensus 215 ~~~~~~C~~C~~~~-nlWiCL~CG~ 238 (356)
.+....|..||... .=-+|+.||+
T Consensus 26 ~p~l~~C~~CG~~~~pHrvC~~CG~ 50 (59)
T d2j0151 26 PPTLVPCPECKAMKPPHTVCPECGY 50 (59)
T ss_dssp CCCCBCCSSSSSCBCTTCBCTTTCC
T ss_pred CCceeECCCCCCcccceeECCCCCe
Confidence 45567888888764 3347888886
Done!