Query 018435
Match_columns 356
No_of_seqs 144 out of 1487
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 15:13:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018435.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018435hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pfo_A Putative acetylornithin 100.0 1.5E-43 5.1E-48 344.8 31.9 277 23-318 21-319 (433)
2 1vgy_A Succinyl-diaminopimelat 100.0 3.7E-43 1.3E-47 337.9 30.9 290 26-335 4-297 (393)
3 3ct9_A Acetylornithine deacety 100.0 7.1E-43 2.4E-47 331.7 30.6 259 26-318 9-269 (356)
4 3isz_A Succinyl-diaminopimelat 100.0 7.3E-42 2.5E-46 326.7 31.7 282 27-330 2-287 (377)
5 3pfe_A Succinyl-diaminopimelat 100.0 3.5E-42 1.2E-46 338.7 29.6 294 28-330 18-373 (472)
6 3dlj_A Beta-Ala-His dipeptidas 100.0 6E-42 2.1E-46 338.1 30.2 289 23-318 20-373 (485)
7 2f7v_A Aectylcitrulline deacet 100.0 8.3E-42 2.8E-46 325.9 28.2 269 23-330 4-280 (369)
8 2pok_A Peptidase, M20/M25/M40 100.0 4.6E-41 1.6E-45 331.6 30.3 305 25-335 40-395 (481)
9 1cg2_A Carboxypeptidase G2; me 100.0 3.7E-41 1.3E-45 324.0 27.4 276 26-330 17-298 (393)
10 3io1_A Aminobenzoyl-glutamate 100.0 3.7E-41 1.3E-45 328.9 23.7 281 23-331 9-336 (445)
11 2zog_A Cytosolic non-specific 100.0 2.3E-40 7.8E-45 326.4 29.4 288 24-318 16-366 (479)
12 2rb7_A Peptidase, M20/M25/M40 100.0 3.8E-41 1.3E-45 320.7 22.9 259 27-318 5-271 (364)
13 3tx8_A Succinyl-diaminopimelat 100.0 1.3E-39 4.3E-44 310.7 29.8 274 25-330 10-288 (369)
14 1ysj_A Protein YXEP; M20 famil 100.0 1.3E-40 4.3E-45 321.4 21.8 276 26-329 30-310 (404)
15 3gb0_A Peptidase T; NP_980509. 100.0 3.8E-39 1.3E-43 307.9 27.2 269 25-329 3-283 (373)
16 1xmb_A IAA-amino acid hydrolas 100.0 5.7E-40 1.9E-44 318.2 21.7 271 28-330 28-303 (418)
17 3rza_A Tripeptidase; phosphory 100.0 9.1E-39 3.1E-43 307.6 28.1 276 19-330 15-304 (396)
18 3ife_A Peptidase T; metallopep 100.0 1.5E-39 5E-44 316.8 20.5 274 27-334 26-347 (434)
19 3khx_A Putative dipeptidase sa 100.0 1.5E-38 5.1E-43 314.1 26.6 287 23-335 29-407 (492)
20 2qyv_A XAA-His dipeptidase; YP 100.0 2E-36 6.7E-41 298.9 27.1 233 26-298 9-271 (487)
21 1fno_A Peptidase T; metallo pe 100.0 3E-36 1E-40 292.0 24.8 269 28-331 2-318 (417)
22 1lfw_A PEPV; hydrolase, dipept 100.0 2.1E-35 7.1E-40 290.3 30.0 287 24-334 10-382 (470)
23 3mru_A Aminoacyl-histidine dip 100.0 1.3E-35 4.5E-40 292.8 26.4 267 26-330 12-308 (490)
24 3ram_A HMRA protein; two-domai 100.0 2.5E-36 8.6E-41 290.3 18.3 260 24-330 12-276 (394)
25 1q7l_A Aminoacylase-1; catalys 100.0 9E-36 3.1E-40 259.8 17.4 191 26-216 8-198 (198)
26 3n5f_A L-carbamoylase, N-carba 100.0 3E-34 1E-38 277.1 25.3 261 26-330 3-319 (408)
27 2v8h_A Beta-alanine synthase; 100.0 1.7E-33 5.9E-38 276.8 26.4 263 22-330 26-357 (474)
28 1z2l_A Allantoate amidohydrola 100.0 8.6E-34 2.9E-38 275.2 21.7 262 26-330 7-323 (423)
29 3t68_A Succinyl-diaminopimelat 100.0 3.5E-29 1.2E-33 228.3 16.0 178 26-211 4-184 (268)
30 4h2k_A Succinyl-diaminopimelat 100.0 6.6E-29 2.3E-33 226.6 17.8 177 27-211 5-184 (269)
31 2fvg_A Endoglucanase; TM1049, 99.9 2.2E-22 7.4E-27 189.5 6.2 166 33-233 3-243 (340)
32 2gre_A Deblocking aminopeptida 99.8 8.8E-21 3E-25 179.1 11.0 154 26-195 4-244 (349)
33 1rtq_A Bacterial leucyl aminop 99.8 3.1E-20 1.1E-24 171.6 11.4 156 25-194 17-181 (299)
34 1tkj_A Aminopeptidase, SGAP; d 99.8 7E-20 2.4E-24 168.0 12.9 149 24-195 3-163 (284)
35 2wyr_A Cobalt-activated peptid 99.8 2.3E-19 7.8E-24 168.2 12.9 144 30-194 4-230 (332)
36 1vhe_A Aminopeptidase/glucanas 99.8 3.3E-19 1.1E-23 169.8 13.8 153 27-194 6-241 (373)
37 3tc8_A Leucine aminopeptidase; 99.8 3E-18 1E-22 158.6 16.7 159 24-194 21-202 (309)
38 3gux_A Putative Zn-dependent e 99.8 4.6E-18 1.6E-22 157.4 16.9 160 23-194 22-205 (314)
39 1y0y_A FRV operon protein FRVX 99.7 1E-17 3.6E-22 158.3 12.2 144 30-194 8-237 (353)
40 2afw_A Glutaminyl-peptide cycl 99.7 4E-17 1.4E-21 152.6 13.5 136 26-179 29-190 (329)
41 1vho_A Endoglucanase; structur 99.7 7.7E-16 2.6E-20 145.0 13.3 152 28-195 5-230 (346)
42 1ylo_A Hypothetical protein SF 99.6 2E-15 6.9E-20 142.2 14.7 145 32-195 7-227 (348)
43 4fuu_A Leucine aminopeptidase; 99.6 1.5E-14 5.2E-19 134.0 18.3 159 23-193 20-202 (309)
44 3kl9_A PEPA, glutamyl aminopep 99.6 2.5E-14 8.6E-19 134.5 15.8 152 29-195 4-240 (355)
45 4f9u_A CG32412; alpha/beta hyd 99.6 2.2E-14 7.6E-19 133.1 14.4 137 25-180 8-164 (312)
46 3cpx_A Aminopeptidase, M42 fam 99.6 1.7E-15 5.8E-20 141.1 5.8 150 26-195 15-221 (321)
47 3pb6_X Glutaminyl-peptide cycl 99.6 2.2E-14 7.5E-19 133.4 12.7 150 25-193 36-218 (330)
48 2wzn_A TET3, 354AA long hypoth 99.6 1.1E-17 3.6E-22 155.4 -9.9 186 31-243 12-199 (354)
49 4fai_A CG5976, isoform B; alph 99.5 9E-14 3.1E-18 129.8 14.9 147 27-193 37-205 (330)
50 2vpu_A TET3, 354AA long hypoth 99.4 3.7E-13 1.3E-17 126.4 11.9 148 29-194 10-240 (354)
51 3isx_A Endoglucanase; TM1050, 99.3 3.4E-12 1.1E-16 119.2 11.1 145 28-194 11-234 (343)
52 2ek8_A Aminopeptidase; metallo 99.2 1.5E-11 5E-16 118.7 9.6 96 76-195 203-304 (421)
53 3iib_A Peptidase M28; YP_92679 99.2 1.4E-11 4.9E-16 119.4 9.0 109 50-180 203-317 (444)
54 3kas_A Transferrin receptor pr 98.9 3.2E-09 1.1E-13 106.6 8.7 95 75-193 265-366 (640)
55 3fed_A Glutamate carboxypeptid 98.9 2.2E-09 7.4E-14 109.0 7.5 81 75-179 311-394 (707)
56 3k9t_A Putative peptidase; str 96.9 0.0026 9E-08 59.8 8.8 82 79-193 168-253 (435)
57 2glj_A Probable M18-family ami 90.6 0.14 4.8E-06 49.2 3.3 47 121-173 252-298 (461)
58 1y7e_A Probable M18-family ami 90.0 0.066 2.3E-06 51.5 0.5 49 121-174 246-294 (458)
59 2glf_A Probable M18-family ami 88.6 0.35 1.2E-05 46.3 4.3 75 26-102 12-96 (450)
60 3h8g_F Cytosol aminopeptidase; 87.8 6.3 0.00022 37.9 12.4 123 30-167 182-323 (497)
61 2ijz_A Probable M18-family ami 87.6 0.15 5E-06 48.6 0.9 66 35-102 6-85 (428)
62 3kzw_A Cytosol aminopeptidase; 87.3 3.8 0.00013 39.5 10.4 123 30-167 199-339 (515)
63 1y7e_A Probable M18-family ami 86.9 0.28 9.4E-06 47.1 2.4 70 28-102 16-99 (458)
64 2glf_A Probable M18-family ami 86.8 0.97 3.3E-05 43.2 6.2 45 122-173 241-285 (450)
65 3pei_A Cytosol aminopeptidase; 86.6 6.2 0.00021 37.8 11.5 123 29-166 165-306 (486)
66 4efd_A Aminopeptidase; structu 86.3 5.2 0.00018 38.5 10.7 124 29-167 205-346 (522)
67 1gyt_A Cytosol aminopeptidase; 85.7 10 0.00034 36.6 12.6 119 31-167 184-326 (503)
68 2hc9_A Leucine aminopeptidase 85.7 14 0.00049 35.3 13.5 123 29-167 168-308 (491)
69 1lam_A Leucine aminopeptidase; 83.2 12 0.00041 35.8 11.9 121 29-167 162-306 (484)
70 2ijz_A Probable M18-family ami 83.2 0.41 1.4E-05 45.5 1.7 47 122-175 227-273 (428)
71 3jru_B Probable cytosol aminop 82.4 14 0.00048 35.4 11.9 123 29-167 177-318 (490)
72 3ij3_A Cytosol aminopeptidase; 81.7 2.5 8.7E-05 40.2 6.5 124 29-167 168-306 (482)
73 3kr4_A M17 leucyl aminopeptida 81.2 25 0.00086 33.9 13.2 122 29-167 206-350 (528)
74 3fed_A Glutamate carboxypeptid 79.8 18 0.00061 36.5 12.4 44 26-69 23-67 (707)
75 3mru_A Aminoacyl-histidine dip 79.7 1.9 6.6E-05 41.5 5.2 48 288-337 358-405 (490)
76 3vat_A Dnpep, aspartyl aminope 77.5 2 6.9E-05 41.4 4.4 77 24-102 29-119 (496)
77 2ek8_A Aminopeptidase; metallo 68.8 7.9 0.00027 36.4 6.3 47 26-72 14-60 (421)
78 2glj_A Probable M18-family ami 61.4 1.3 4.6E-05 42.4 -0.7 72 28-102 18-105 (461)
79 2jvf_A De novo protein M7; tet 60.8 11 0.00038 25.6 3.9 41 289-329 14-55 (96)
80 3iib_A Peptidase M28; YP_92679 47.9 21 0.00071 33.8 5.1 44 28-71 21-67 (444)
81 3vat_A Dnpep, aspartyl aminope 40.0 63 0.0022 31.0 7.1 46 122-169 277-326 (496)
82 4eme_A M18 aspartyl aminopepti 36.5 83 0.0028 30.7 7.4 71 30-102 6-91 (571)
83 3kas_A Transferrin receptor pr 22.6 64 0.0022 32.1 3.9 40 28-67 18-60 (640)
84 1im3_D Cytomegalovirus protein 20.3 41 0.0014 23.2 1.4 13 116-129 10-22 (95)
No 1
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.5e-43 Score=344.81 Aligned_cols=277 Identities=18% Similarity=0.254 Sum_probs=234.1
Q ss_pred CCCChhHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEee------------------cCCCceEEEEec
Q 018435 23 PAKSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEF------------------AKNKPLILLKWP 84 (356)
Q Consensus 23 ~~~~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~------------------~~~~~nv~~~~~ 84 (356)
++...+++++++++|+++||. +++|.++++||.++|+++|++++.+.. .++.+||++.++
T Consensus 21 i~~~~~~~~~~l~~l~~~ps~--s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~~~ 98 (433)
T 3pfo_A 21 VDRNFNDQVAFLQRMVQFRSV--RGEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAGSMQVVATAD 98 (433)
T ss_dssp HHHHHHHHHHHHHHHHTSCCB--TTCCHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTCCGGGCEEEEEEEC
T ss_pred HHhhHHHHHHHHHHHhcCCCC--CCCHHHHHHHHHHHHHHCCCceEEEecchhhhhccccccccccccCCCCcEEEEEEe
Confidence 344568899999999999997 578999999999999999999887642 246789999998
Q ss_pred CCCCCCCcEEEEeecccCCCCC-CCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEee
Q 018435 85 GSNPQLPSILLNSHTDVVPSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVP 163 (356)
Q Consensus 85 g~~~~~~~il~~aH~Dtvp~~~-~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~ 163 (356)
|.. .+|+|+|+|||||||.++ ++|+++||++.+ ++|++||||++|||++++++|.+++.|++.+..++++|.|+|++
T Consensus 99 g~~-~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~-~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~ 176 (433)
T 3pfo_A 99 SDG-KGRSLILQGHIDVVPEGPVDLWSDPPYEAKV-RDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAPDARVHVQTVT 176 (433)
T ss_dssp CCC-CSCCEEEEEECCBCCCCCGGGCSSCTTTCCE-ETTEEECTTTTTTHHHHHHHHHHHHHHHHTTEEESSCEEEEEES
T ss_pred cCC-CCCEEEEEcccCCcCCCCcccCCCCCCCcEE-ECCEEEecchhhhhHHHHHHHHHHHHHHHcCCCCCccEEEEEEe
Confidence 754 458999999999999976 799999999988 89999999999999999999999999999887788999999999
Q ss_pred ccccCccccHHHHhccccccCCceEEEEecCccCcCCcceeEEeeeeeEEEEEEEEecCCccCCCCCC-CHHHHHHHHHH
Q 018435 164 DEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIE 242 (356)
Q Consensus 164 ~EE~g~~~G~~~~~~~~~~~~~~~~~~~~~g~~~p~~~~~i~~~~~G~~~~~v~~~G~~~Hs~~p~~g-nai~~~~~~~~ 242 (356)
+||.|+ .|++.+++.+. +.|.+++.+ |+. ..++++.+|..+++|+++|+++|++.|+.+ ||+..+++++.
T Consensus 177 ~EE~g~-~G~~~~~~~~~--~~d~~i~~e-----p~~-~~i~~~~~G~~~~~i~v~G~~~Ha~~p~~g~nAi~~~~~~i~ 247 (433)
T 3pfo_A 177 EEESTG-NGALSTLMRGY--RADACLIPE-----PTG-HTLTRAQVGAVWFRLRVRGTPVHVAYSETGTSAILSAMHLIR 247 (433)
T ss_dssp CTTTTC-HHHHHHHHTTC--CCSEEEECC-----CCS-SCEEEEECEEEEEEEEEECCCCBGGGGGGSCCHHHHHHHHHH
T ss_pred cCccCC-hhHHHHHhcCC--CCCEEEEeC-----CCC-CceEEecceEEEEEEEEEcCCCccCCCCcCcCHHHHHHHHHH
Confidence 999986 59999887642 467777664 443 478999999999999999999999999888 99999999999
Q ss_pred HHHcchhhhHHHHH-hc-ccccCCceeeeEeeeecCCCCCCCccccccCCeEEEEEEEecCCCCCHHHHHHHHHHHhc
Q 018435 243 SVRRFRASQFDLVK-AG-LKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWA 318 (356)
Q Consensus 243 ~i~~~~~~~~~~~~-~~-~~~~~~~~~v~~~~i~~g~~~~~~~~~nvip~~~~~~~diR~~~~~~~~~~~~~i~~~~~ 318 (356)
.|+.+......... ++ +.......+++++.++||. +.|+||++|++.+++|+.|.++.+++.++|++.+.
T Consensus 248 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~vg~i~gG~------~~NvIP~~a~~~~~iR~~~~~~~~~~~~~i~~~~~ 319 (433)
T 3pfo_A 248 AFEEYTKELNAQAVRDPWFGQVKNPIKFNVGIIKGGD------WASSTAAWCELDCRLGLLTGDTPQEAMRGIEKCLA 319 (433)
T ss_dssp HHHHHHHHHHHHGGGCTTTTTSSSCSCEEEEEEEECS------CTTBCCCEEEEEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccccCccccccCCCceEEeeeEECCC------CCcccCcEEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 99877542111100 10 1111234689999999998 99999999999999999999999999999987765
No 2
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=3.7e-43 Score=337.95 Aligned_cols=290 Identities=19% Similarity=0.272 Sum_probs=230.9
Q ss_pred ChhHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCCCCCCcEEEEeecccCCCC
Q 018435 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (356)
Q Consensus 26 ~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~~~~~~il~~aH~Dtvp~~ 105 (356)
..+++++++++|+++||. +++|.+++++|.++|+++|++++.... ++.+|+++.+ |+ +.|+|+|+|||||||.+
T Consensus 4 ~~~~~~~~l~~lv~~ps~--s~~e~~~~~~l~~~l~~~G~~~~~~~~-~~~~nv~a~~-g~--~~~~i~l~~H~D~Vp~~ 77 (393)
T 1vgy_A 4 TETQSLELAKELISRPSV--TPDDRDCQKLMAERLHKIGFAAEEMHF-GNTKNIWLRR-GT--KAPVVCFAGHTDVVPTG 77 (393)
T ss_dssp CCSHHHHHHHHHHTSCCB--TTCCTTHHHHHHHHHHTTTCEEEECCB-TTBCEEEEEE-CS--SSSEEEEEEECCBCCCC
T ss_pred chHHHHHHHHHHhcCCCC--CCCcHHHHHHHHHHHHHcCCcEEEEec-CCCcEEEEEE-CC--CCCEEEEEcccCCcCCC
Confidence 357899999999999997 457888999999999999998875332 4678999999 65 24899999999999997
Q ss_pred C-CCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHHHhcccccc-
Q 018435 106 P-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFN- 183 (356)
Q Consensus 106 ~-~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~- 183 (356)
+ .+|+++||++.+ ++|++||||++|||++++++|++++.|++.+..++++|+|+|+++||+++..|++.+++.....
T Consensus 78 ~~~~w~~~Pf~~~~-~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~Ga~~~~~~~~~~~ 156 (393)
T 1vgy_A 78 PVEKWDSPPFEPAE-RDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKARD 156 (393)
T ss_dssp CGGGSSSCTTSCEE-ETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTT
T ss_pred CcccCCCCCCceEE-ECCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCcCCHHHHHHHHHhcC
Confidence 6 689999999998 8999999999999999999999999999887778999999999999986556999887653222
Q ss_pred -CCceEEEEecCccCcCCcceeEEeeeeeEEEEEEEEecCCccCCCCCC-CHHHHHHHHHHHHHcchhhhHHHHHhcccc
Q 018435 184 -SLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKA 261 (356)
Q Consensus 184 -~~~~~~~~~~g~~~p~~~~~i~~~~~G~~~~~v~~~G~~~Hs~~p~~g-nai~~~~~~~~~i~~~~~~~~~~~~~~~~~ 261 (356)
..+.+++.+.+...+.+ ..+..+.+|..+++|+++|+++|++.|+.+ ||+..+++++..+..+.... ...
T Consensus 157 ~~~d~~i~~e~~~~~~~g-~~i~~g~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~a~~i~~l~~~~~~~-------~~~ 228 (393)
T 1vgy_A 157 ELIDYCIVGEPTAVDKLG-DMIKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDE-------GNE 228 (393)
T ss_dssp CCEEEEEECCCCBSSSTT-SEEECEECEEEEEEEEEECBCEETTCGGGCBCHHHHHHHHHHHHHHCCCCC-------CCS
T ss_pred cCCCEEEEeCCCCcccCC-ceeEEeeeeEEEEEEEEEccCcccCCCccCCCHHHHHHHHHHHhhcccccc-------ccc
Confidence 24555555433211111 137788999999999999999999999988 99999999999987653210 001
Q ss_pred cCCceeeeEeeeecCCCCCCCccccccCCeEEEEEEEecCCCCCHHHHHHHHHHHhccCCCCceEEEEeecccc
Q 018435 262 EGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEVVINSLSL 335 (356)
Q Consensus 262 ~~~~~~v~~~~i~~g~~~~~~~~~nvip~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 335 (356)
....++++++.+++|.. +.|+||++|++.+++|+++.++.+++.++|++++......+++++.....|+
T Consensus 229 ~~~~~~~~v~~i~gG~~-----~~NviP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~p~ 297 (393)
T 1vgy_A 229 YFPPTSFQISNINGGTG-----ATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDKHGVQYDLQWSCSGQPF 297 (393)
T ss_dssp SCCCCEEEEEEEEECCS-----CTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEEEEECCE
T ss_pred ccCCCeEEEeeEcCCCC-----CCcccCCeEEEEEEEecCCCCCHHHHHHHHHHHHHHhCCCeEEEEecCCCcc
Confidence 12346888999998841 7899999999999999999999999999999877632233444443333443
No 3
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=7.1e-43 Score=331.70 Aligned_cols=259 Identities=23% Similarity=0.309 Sum_probs=217.5
Q ss_pred ChhHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCCCCCCcEEEEeecccCCCC
Q 018435 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (356)
Q Consensus 26 ~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~~~~~~il~~aH~Dtvp~~ 105 (356)
..+++++++++|+++||+ +++|.++++|+.++|+++|++++.. .+|++++++|++++.|+|+|.|||||||++
T Consensus 9 ~~~~~~~~~~~l~~~ps~--s~~e~~~~~~l~~~l~~~g~~~~~~-----~~nv~a~~~g~~~~~~~i~l~aH~D~vp~~ 81 (356)
T 3ct9_A 9 MTAEAVSLLKSLISIPSI--SREETQAADFLQNYIEAEGMQTGRK-----GNNVWCLSPMFDLKKPTILLNSHIDTVKPV 81 (356)
T ss_dssp HHHHHHHHHHHHHTSCCB--TTCCHHHHHHHHHHHHHTTCCEEEE-----TTEEEEECSSCCTTSCEEEEEEECCBCCCC
T ss_pred HHHHHHHHHHHHhcCCCC--CCChHHHHHHHHHHHHHCCCeEEEE-----eeeEEEEEecCCCCCCeEEEEccccccCCC
Confidence 357899999999999997 5688999999999999999988762 789999998733345899999999999997
Q ss_pred CCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeecccc-CccccHHHHhccccccC
Q 018435 106 PSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI-GGHDGAEKFADSHVFNS 184 (356)
Q Consensus 106 ~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~-g~~~G~~~~~~~~~~~~ 184 (356)
+ +|+.+||++.+ ++|++||||++|||++++++|++++.|++.+ ++++|+|+|+++||. |+ .|++++++++ .+
T Consensus 82 ~-~w~~~p~~~~~-~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~~g~-~G~~~~~~~~--~~ 154 (356)
T 3ct9_A 82 N-GWRKDPFTPRE-ENGKLYGLGSNDAGASVVSLLQVFLQLCRTS--QNYNLIYLASCEEEVSGK-EGIESVLPGL--PP 154 (356)
T ss_dssp --------CCCEE-CSSEEESTTTTTTHHHHHHHHHHHHHHTTSC--CSSEEEEEEECCGGGTCT-TTHHHHGGGS--CC
T ss_pred C-CCCCCCCccEE-ECCEEEecCcccchHHHHHHHHHHHHHHhcC--CCCCEEEEEEeCcccCCc-cCHHHHHhhC--CC
Confidence 5 79999999998 8999999999999999999999999999876 689999999999998 64 6999999875 34
Q ss_pred CceEEEEecCccCcCCcceeEEeeeeeEEEEEEEEecCCccCCCCCC-CHHHHHHHHHHHHHcchhhhHHHHHhcccccC
Q 018435 185 LNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEG 263 (356)
Q Consensus 185 ~~~~~~~~~g~~~p~~~~~i~~~~~G~~~~~v~~~G~~~Hs~~p~~g-nai~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 263 (356)
.|++++.+ |+. ..++++.+|..+++|+++|+++|++.| .+ ||+..+++++..++.+.... . ....
T Consensus 155 ~d~~i~~e-----p~~-~~i~~~~~G~~~~~i~~~G~~~Ha~~p-~g~nAi~~~~~~i~~l~~~~~~~----~---~~~~ 220 (356)
T 3ct9_A 155 VSFAIVGE-----PTE-MQPAIAEKGLMVLDVTATGKAGHAARD-EGDNAIYKVLNDIAWFRDYRFEK----E---SPLL 220 (356)
T ss_dssp CSEEEECC-----SBT-TCCEEEECCCEEEEEEEECBCCBTTSS-CCBCTTGGGHHHHHHHHHCCCSC----C---BTTT
T ss_pred CCEEEEcC-----CCC-ceEEEeeeEEEEEEEEEECCCcccCCC-CCCCHHHHHHHHHHHHHhhhccc----c---cccC
Confidence 66666664 432 367889999999999999999999999 88 99999999999998764310 0 0012
Q ss_pred CceeeeEeeeecCCCCCCCccccccCCeEEEEEEEecCCCCCHHHHHHHHHHHhc
Q 018435 264 EVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWA 318 (356)
Q Consensus 264 ~~~~v~~~~i~~g~~~~~~~~~nvip~~~~~~~diR~~~~~~~~~~~~~i~~~~~ 318 (356)
..++++++.++||. +.|+||++|++.+++|+++.++.+++.++|++.+.
T Consensus 221 ~~~~~~vg~i~gG~------~~NviP~~a~~~~~iR~~~~~~~~~~~~~i~~~~~ 269 (356)
T 3ct9_A 221 GPVKMSVTVINAGT------QHNVVPDKCTFVVDIRSNELYSNEDLFAEIRKHIA 269 (356)
T ss_dssp BSCEEEEEEEEECS------STTBCCSEEEEEEEEECCTTCCHHHHHHHHHHHCC
T ss_pred CCCcEEeeEEecCC------cCCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHhh
Confidence 34789999999998 99999999999999999999999999999998775
No 4
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=100.00 E-value=7.3e-42 Score=326.66 Aligned_cols=282 Identities=18% Similarity=0.259 Sum_probs=222.7
Q ss_pred hhHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCCCCCCcEEEEeecccCCCCC
Q 018435 27 DDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEP 106 (356)
Q Consensus 27 ~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~~~~~~il~~aH~Dtvp~~~ 106 (356)
.+++++++++|+++||+ +++|.+++++|.++|+++|++++.+. .++.+|+++.+ |+ +.|+|+|+||||+||.++
T Consensus 2 ~~~~~~~~~~L~~~ps~--s~~e~~~~~~l~~~l~~~g~~~~~~~-~~~~~n~~a~~-g~--~~~~i~l~aH~D~vp~~~ 75 (377)
T 3isz_A 2 KEKVVSLAQDLIRRPSI--SPNDEGCQQIIAERLEKLGFQIEWMP-FNDTLNLWAKH-GT--SEPVIAFAGHTDVVPTGD 75 (377)
T ss_dssp HHHHHHHHHHHHTSCCB--TTCCTTHHHHHHHHHHHTTCEEEECC-BTTBCEEEEEE-ES--SSCEEEEEEECCBCCCCC
T ss_pred chHHHHHHHHHhcCCCC--CCChhhHHHHHHHHHHHCCCceEEee-cCCCceEEEEe-CC--CCCEEEEeccccccCCCC
Confidence 36789999999999997 56788999999999999999887532 24678999988 64 358999999999999987
Q ss_pred -CCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHHHhccccc--c
Q 018435 107 -SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVF--N 183 (356)
Q Consensus 107 -~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~--~ 183 (356)
++|+++||++.+ ++|++||||++|||++++++|.+++.|++.+..++++|+|+|+++||.|+..|++.+++.... .
T Consensus 76 ~~~w~~~pf~~~~-~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~G~~~~~~~~~~~~~ 154 (377)
T 3isz_A 76 ENQWSSPPFSAEI-IDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDE 154 (377)
T ss_dssp GGGCSSCTTSCCE-ETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCSSSHHHHHHHHHHTTC
T ss_pred cccCCCCCCCcEE-ECCEEEeCChhhhhHHHHHHHHHHHHHHHhCCCCCceEEEEEEcccccCccccHHHHHHHHHhcCC
Confidence 689999999998 899999999999999999999999999988777899999999999998754599988765322 2
Q ss_pred CCceEEEEecCccCcCCcceeEEeeeeeEEEEEEEEecCCccCCCCCC-CHHHHHHHHHHHHHcchhhhHHHHHhccccc
Q 018435 184 SLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAE 262 (356)
Q Consensus 184 ~~~~~~~~~~g~~~p~~~~~i~~~~~G~~~~~v~~~G~~~Hs~~p~~g-nai~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 262 (356)
..+.+++.+.....+.+ ..+..+.+|..+++++++|+++|++.|+.+ ||+..+++++..+..+.... ....
T Consensus 155 ~~d~~~~~e~~~~~~~g-~~i~~g~~g~~~~~i~~~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~~~~~-------~~~~ 226 (377)
T 3isz_A 155 KITYCMVGEPSSAKNLG-DVVKNGRRGSITGNLYIQGIQGHVAYPHLAENPIHKAALFLQELTTYQWDK-------GNEF 226 (377)
T ss_dssp CCCEEEECCCCBSSSTT-SEEEEEECEEEEEEEEEECC-------CGGGCHHHHHHHHHHHHHHCCCCC-------CCSS
T ss_pred CCCEEEEcCCCCcccCC-ceEEEEcceEEEEEEEEEccccccCCCccCcCHHHHHHHHHHHHHhccccc-------cccc
Confidence 35666654432211211 237889999999999999999999999988 99999999999987653210 0011
Q ss_pred CCceeeeEeeeecCCCCCCCccccccCCeEEEEEEEecCCCCCHHHHHHHHHHHhccCCCCceEEEEe
Q 018435 263 GEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEVVI 330 (356)
Q Consensus 263 ~~~~~v~~~~i~~g~~~~~~~~~nvip~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 330 (356)
...++++++.+++|.. +.|+||++|++.+|+|+++.++.+++.++|++.+.. .++++++..
T Consensus 227 ~~~~~~~v~~i~gg~~-----~~nvip~~~~~~~diR~~~~~~~~~i~~~i~~~~~~--~g~~~~i~~ 287 (377)
T 3isz_A 227 FPPTSLQIANIHAGTG-----SNNVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEK--HNLKYRIEW 287 (377)
T ss_dssp SCCCEEEEEEEEECCS-----CSSCCCSEEEEEEEEEECTTSCHHHHHHHHHHHHHH--TTCCEEEEE
T ss_pred cCCceeEEEEEECCCC-----CCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHH--cCCCeEEEE
Confidence 2347899999998852 689999999999999999999999999999987753 455555543
No 5
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=100.00 E-value=3.5e-42 Score=338.67 Aligned_cols=294 Identities=18% Similarity=0.211 Sum_probs=235.1
Q ss_pred hHHHHHHHhhhcccCCCCC--------cChhHHHHHHHHHHHHCCCc---eEEEeecCCCceEEEEecCCCCCCCcEEEE
Q 018435 28 DSIIERFRAYLQIDTSQPN--------PDYTNASKFILAQAEALSLE---SQTLEFAKNKPLILLKWPGSNPQLPSILLN 96 (356)
Q Consensus 28 ~~~~~~l~~l~~i~s~s~~--------~~e~~~~~~l~~~l~~~g~~---~~~~~~~~~~~nv~~~~~g~~~~~~~il~~ 96 (356)
++++++|++|++|||+|+. ++|.++++++.++|+++|++ ++.++...+.+||++.++| . +.|+|+|+
T Consensus 18 ~~~~~~l~~lv~ips~s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~v~a~~~g-~-~~~~i~l~ 95 (472)
T 3pfe_A 18 EEILPSLCDYIKIPNKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPKGMTLEIVRLKNRTPLLFMEIPG-Q-IDDTVLLY 95 (472)
T ss_dssp HTHHHHHHHHHTCCCBCGGGCTTHHHHCHHHHHHHHHHHHHHHTCCTTCEEEEECCTTSCCEEEEEECC-S-EEEEEEEE
T ss_pred HHHHHHHHHHhCCCCcCCCccccccccchHHHHHHHHHHHHHHcCCCCcceEEEecCCCCcEEEEEEcC-C-CCCeEEEE
Confidence 6799999999999998643 34889999999999999985 5544433347899999987 3 35899999
Q ss_pred eecccCCCCCCCCC--CCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHH
Q 018435 97 SHTDVVPSEPSKWS--HHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAE 174 (356)
Q Consensus 97 aH~Dtvp~~~~~w~--~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~ 174 (356)
|||||||+. +.|+ .+||++++ ++|++||||++|||++++++|.|++.|++.+..+. +|+|+|+++||+|+ .|++
T Consensus 96 ~H~D~vp~~-~~w~~~~~Pf~~~~-~~g~~~grG~~D~K~~~a~~l~a~~~l~~~~~~~~-~v~~~~~~~EE~g~-~g~~ 171 (472)
T 3pfe_A 96 GHLDKQPEM-SGWSDDLHPWKPVL-KNGLLYGRGGADDGYSAYASLTAIRALEQQGLPYP-RCILIIEACEESGS-YDLP 171 (472)
T ss_dssp EECCBCCCC-SCCCTTCBTTBCEE-ETTEEESTTCCCCCHHHHHHHHHHHHHHHTTCCCE-EEEEEEESCGGGTS-TTHH
T ss_pred ccccCCCCc-CCCCcCCCCCceEE-ECCEEEEeCcccCcHHHHHHHHHHHHHHHcCCCCC-cEEEEEEeCCCCCC-hhHH
Confidence 999999996 7899 99999988 89999999999999999999999999999887766 99999999999987 6999
Q ss_pred HHhccc--cccCCceEEEEecCccCcCCcceeEEeeeeeEEEE--EEEEecCCccCCCCCC--CHHHHHHHHHHHHHcch
Q 018435 175 KFADSH--VFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLV--IKARGAPGHGAKLYDN--SAMENLFKSIESVRRFR 248 (356)
Q Consensus 175 ~~~~~~--~~~~~~~~~~~~~g~~~p~~~~~i~~~~~G~~~~~--v~~~G~~~Hs~~p~~g--nai~~~~~~~~~i~~~~ 248 (356)
++++++ .+.+.+.++++|.+...+ +...+.+|.+|..+++ |+++|+++|++.|+.. ||+..+++++..|+.+.
T Consensus 172 ~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~i~~g~~G~~~~~~~v~~~G~~~H~~~~~~~~~nai~~~~~~i~~l~~~~ 250 (472)
T 3pfe_A 172 FYIELLKERIGKPSLVICLDSGAGNY-EQLWMTTSLRGNLVGKLTVELINEGVHSGSASGIVADSFRVARQLISRIEDEN 250 (472)
T ss_dssp HHHHHHHHHHCCCSEEEEECCBCSCS-SSCEEEEEECEEEEEEEEEESCSSCBCHHHHTTTSCCHHHHHHHHHHHHBCTT
T ss_pred HHHHHhHhhccCCCEEEEeCCCcCCC-CCeeEEEeeeEEEEEEEEEEeCCCCcccCCCCCCCCCHHHHHHHHHHHhhCcC
Confidence 999864 344678888888654333 3568999999999877 5558999999998764 99999999999998762
Q ss_pred h-------------h----hHHHHHh----------cc----cccC-----------CceeeeEeeeecCCCCCCCcccc
Q 018435 249 A-------------S----QFDLVKA----------GL----KAEG-----------EVVSVNMAFLKAGTPSPNGFVMN 286 (356)
Q Consensus 249 ~-------------~----~~~~~~~----------~~----~~~~-----------~~~~v~~~~i~~g~~~~~~~~~n 286 (356)
. + ....+.. ++ .... ..++++++.++||.. ++.+.|
T Consensus 251 ~~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~i~~i~gG~~--~g~a~N 328 (472)
T 3pfe_A 251 TGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQDKQQLILNRTWRPALTVTGADGFPA--IADAGN 328 (472)
T ss_dssp TCCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTCCCSCSCHHHHHHHHHTSCEEEEEEEESCCC--TTTCCS
T ss_pred CCCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCccccccchHHHHHHhhcCCcEEEeeeecCcC--CCCCCC
Confidence 0 0 0000000 00 0000 047899999998720 122899
Q ss_pred ccCCeEEEEEEEecCCCCCHHHHHHHHHHHhcc-CCCCceEEEEe
Q 018435 287 LQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP-ASRNMTFEVVI 330 (356)
Q Consensus 287 vip~~~~~~~diR~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~ 330 (356)
+||++|++++++|+.+.++.+.+.++|++++.. ...++++++..
T Consensus 329 vIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~g~~v~v~~ 373 (472)
T 3pfe_A 329 VMRPVTSLKLSMRLPPLVDPEAASVAMEKALTQNPPYNAKVDFKI 373 (472)
T ss_dssp CBCSEEEEEEEEEECTTCCHHHHHHHHHHHHHSSCGGGCEEEEEE
T ss_pred EeCCccEEEEEeecCCCCCHHHHHHHHHHHHHhhCCCCeEEEEEe
Confidence 999999999999999999999999999987763 23677887765
No 6
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=100.00 E-value=6e-42 Score=338.11 Aligned_cols=289 Identities=15% Similarity=0.264 Sum_probs=227.8
Q ss_pred CCCChhHHHHHHHhhhcccCCCCCcC------hhHHHHHHHHHHHHCCCceEEEeec-----CC-----CceEEEEecCC
Q 018435 23 PAKSDDSIIERFRAYLQIDTSQPNPD------YTNASKFILAQAEALSLESQTLEFA-----KN-----KPLILLKWPGS 86 (356)
Q Consensus 23 ~~~~~~~~~~~l~~l~~i~s~s~~~~------e~~~~~~l~~~l~~~g~~~~~~~~~-----~~-----~~nv~~~~~g~ 86 (356)
++...+++++++++|++|||++.+.+ +.++++||.++|+++|++++..+.. ++ .+||++.+.+.
T Consensus 20 i~~~~~~~i~~l~~lv~ips~~~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~~v~a~~~~~ 99 (485)
T 3dlj_A 20 IDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPIPPVILAELGSD 99 (485)
T ss_dssp HHHTHHHHHHHHHHHHTSCCBSSSCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCEEEC--CCEEECCCEEEEEECCC
T ss_pred HHHhHHHHHHHHHHHhcCCCccCCCCccccHHHHHHHHHHHHHHHHcCCeEEEEecCcccccCCCccCCCcEEEEEECCC
Confidence 34567899999999999999832333 6799999999999999998865432 23 36899999543
Q ss_pred CCCCCcEEEEeecccCCCCC-CCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeecc
Q 018435 87 NPQLPSILLNSHTDVVPSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDE 165 (356)
Q Consensus 87 ~~~~~~il~~aH~Dtvp~~~-~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~E 165 (356)
+.+|+|+|+|||||||+++ +.|+.+||++++ ++|++||||++|||++++++|.|++.|++.+..++++|.|+|+++|
T Consensus 100 -~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~-~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~E 177 (485)
T 3dlj_A 100 -PTKGTVCFYGHLDVQPADRGDGWLTDPYVLTE-VDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGME 177 (485)
T ss_dssp -TTSCEEEEEEECCBCCCCGGGTCSSCTTSCEE-ETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEESCG
T ss_pred -CCCCEEEEEeeecCCCCCCcccCCCCCCccEE-ECCEEEecccccCcHHHHHHHHHHHHHHHhCCCCCccEEEEEEccc
Confidence 3458999999999999975 689999999998 8999999999999999999999999999998888999999999999
Q ss_pred ccCccccHHHHhcccc---ccCCceEEEEecCccCcCCcceeEEeeeeeEEEEEEEEecCC--ccCCCCCCCHHHHHHHH
Q 018435 166 EIGGHDGAEKFADSHV---FNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPG--HGAKLYDNSAMENLFKS 240 (356)
Q Consensus 166 E~g~~~G~~~~~~~~~---~~~~~~~~~~~~g~~~p~~~~~i~~~~~G~~~~~v~~~G~~~--Hs~~p~~gnai~~~~~~ 240 (356)
|+|+ .|++.+++++. +.+.|.+++++.+...+ +...+.++.+|..+++|+++|+++ |++. ...|++.++..+
T Consensus 178 E~g~-~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~g~~g~~~~~i~v~G~~~~~H~~~-~g~~a~~~~~~l 254 (485)
T 3dlj_A 178 EAGS-VALEELVEKEKDRFFSGVDYIVISDNLWISQ-RKPAITYGTRGNSYFMVEVKCRDQDFHSGT-FGGILHEPMADL 254 (485)
T ss_dssp GGTT-TTHHHHHHHHTTTTSTTCCEEEECCCBCCC---CCEEEEEECEEEEEEEEEESCSSCEETTT-STTSSCCHHHHH
T ss_pred ccCC-ccHHHHHHhhhhhcccCCCEEEEcCCCccCC-CCeeEEEeccceEEEEEEEEECCCCCcCCC-CCccccCHHHHH
Confidence 9986 69999998753 44678888876432111 245788999999999999999999 9997 333777777777
Q ss_pred HHHHHcchhhh-------------------HHHHHh-ccc-----------c------------cCCceeeeEeeeecCC
Q 018435 241 IESVRRFRASQ-------------------FDLVKA-GLK-----------A------------EGEVVSVNMAFLKAGT 277 (356)
Q Consensus 241 ~~~i~~~~~~~-------------------~~~~~~-~~~-----------~------------~~~~~~v~~~~i~~g~ 277 (356)
++.|..+.... .+.+.. ++. . ....++++++.++||.
T Consensus 255 ~~~l~~l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~i~gG~ 334 (485)
T 3dlj_A 255 VALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHLWRYPSLSIHGIEGAF 334 (485)
T ss_dssp HHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHHTCSCCSCSSHHHHHHHHHTSCEEEEEEEESSC
T ss_pred HHHHHhhCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhcCCCcccccchHHHHHHHhcCCceEEEEEecCC
Confidence 77776654321 000000 000 0 0014789999999982
Q ss_pred CCCCCccccccCCeEEEEEEEecCCCCCHHHHHHHHHHHhc
Q 018435 278 PSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWA 318 (356)
Q Consensus 278 ~~~~~~~~nvip~~~~~~~diR~~~~~~~~~~~~~i~~~~~ 318 (356)
. ++.+.|+||++|++++++|+.+.+..+.+.++|++++.
T Consensus 335 ~--gp~a~NVIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~ 373 (485)
T 3dlj_A 335 D--EPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLE 373 (485)
T ss_dssp C--SSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred c--CCCCCceeCCeeEEEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 1 11289999999999999999999999999999997776
No 7
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=100.00 E-value=8.3e-42 Score=325.89 Aligned_cols=269 Identities=20% Similarity=0.263 Sum_probs=219.1
Q ss_pred CCCChhHHHHHHHhhhcccCCCCCc---ChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCCCCCCcEEEEeec
Q 018435 23 PAKSDDSIIERFRAYLQIDTSQPNP---DYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHT 99 (356)
Q Consensus 23 ~~~~~~~~~~~l~~l~~i~s~s~~~---~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~~~~~~il~~aH~ 99 (356)
+....+++++++++|++|||+++.+ +|.++++||.++|+ |++++..+..++.+|+++ ++|+ |+|+|+|||
T Consensus 4 ~~~~~~~~~~~l~~l~~ips~s~~~~~~~e~~~~~~l~~~l~--G~~~~~~~~~~~~~~~~a-~~g~----~~i~l~~H~ 76 (369)
T 2f7v_A 4 MTDLLASTLEHLETLVSFDTRNPPRAIAAEGGIFDYLRAQLP--GFQVEVIDHGDGAVSLYA-VRGT----PKYLFNVHL 76 (369)
T ss_dssp CCHHHHHHHHHHHHHHHSCCBTTTTCCCSSSHHHHHHHTTCT--TCEEEEEECSTTCEEEEE-EESC----CSEEEEEEC
T ss_pred hhhhhHHHHHHHHHHhCCCCcCCCCCCccHHHHHHHHHHHhC--CCceEEEEcCCCceEEEE-EcCC----CeEEEEeee
Confidence 4445688999999999999987556 89999999999999 998877555456789999 9764 689999999
Q ss_pred ccCCCCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeecccc-CccccHHHHhc
Q 018435 100 DVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI-GGHDGAEKFAD 178 (356)
Q Consensus 100 Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~-g~~~G~~~~~~ 178 (356)
||||.++ +|+.+||++.+ ++|++||||++|||++++++|++++. ++++|+|+|+++||. |+ .|++++++
T Consensus 77 D~vp~~~-~w~~~pf~~~~-~~g~l~grG~~D~k~g~a~~l~a~~~-------~~~~v~~~~~~~EE~~g~-~G~~~~~~ 146 (369)
T 2f7v_A 77 DTVPDSP-HWSADPHVMRR-TEDRVIGLGVCDIKGAAAALVAAANA-------GDGDAAFLFSSDEEANDP-RCIAAFLA 146 (369)
T ss_dssp CBCCCCS-SCSSCTTSCEE-CSSEEECTTTTTTHHHHHHHHHHHTT-------CCCCEEEEEESCTTSSSC-CHHHHHHT
T ss_pred cccCCCC-CCCCCCCCcEE-ECCEEEecccccccHHHHHHHHHHhc-------CCCCEEEEEEeCcccCCC-cCHHHHHh
Confidence 9999875 89999999998 89999999999999999999999876 578999999999998 64 79999998
Q ss_pred cccccCCceEEEEecCccCcCCcceeEEeeeeeEEEEEEEEecCCccCCCC-CC-CHHHHHHHHHHHHHcchhhhHHHHH
Q 018435 179 SHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLY-DN-SAMENLFKSIESVRRFRASQFDLVK 256 (356)
Q Consensus 179 ~~~~~~~~~~~~~~~g~~~p~~~~~i~~~~~G~~~~~v~~~G~~~Hs~~p~-~g-nai~~~~~~~~~i~~~~~~~~~~~~ 256 (356)
++. ..|.+++++ |+ ...++++.+|..+++|+++|+++|++.|+ .+ ||+..+++++..+..+... ..
T Consensus 147 ~~~--~~d~~i~~e-----~~-~~~i~~~~~g~~~~~i~v~G~~~Ha~~p~~~g~nAi~~~~~~i~~l~~~~~~----~~ 214 (369)
T 2f7v_A 147 RGL--PYDAVLVAE-----PT-MSEAVLAHRGISSVLMRFAGRAGHASGKQDPAASALHQAMRWGGKALDHVES----LA 214 (369)
T ss_dssp TCC--CCSEEEECC-----CS-TTCBBCCBCCEEEEEEEEECCCC------CTTSCHHHHHHHHHHHHHHHHHH----TT
T ss_pred cCC--CCCEEEECC-----CC-CCcceeecCceEEEEEEEeeeCcccCCCCcCCCCHHHHHHHHHHHHHhhhhh----hc
Confidence 754 567777654 33 24678899999999999999999999998 77 9999999999998765431 00
Q ss_pred hc--ccccCCceeeeEeeeecCCCCCCCccccccCCeEEEEEEEecCCCCCHHHHHHHHHHHhccCCCCceEEEEe
Q 018435 257 AG--LKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEVVI 330 (356)
Q Consensus 257 ~~--~~~~~~~~~v~~~~i~~g~~~~~~~~~nvip~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 330 (356)
.. .+..+ ++++++.+++|. +.|+||++|++.+|+|+.+.++.+++.++|++.+.. .++++++..
T Consensus 215 ~~~~~~~~~--~~~~vg~i~gG~------~~NviP~~a~~~~diR~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~ 280 (369)
T 2f7v_A 215 HARFGGLTG--LRFNIGRVDGGI------KANMIAPAAELRFGFRPLPSMDVDGLLATFAGFADP--AAAHFEETF 280 (369)
T ss_dssp TCEETTEES--CEEEEEEEEECS------STTSCCSEEEEEEEEECCTTCCHHHHHHHHHHTCSS--CCSEEEEEE
T ss_pred ccccCcccC--CceEEEEeecCC------CCCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHHHH--hcCceEEEe
Confidence 00 00011 689999999998 999999999999999999999999999999987652 246666654
No 8
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=100.00 E-value=4.6e-41 Score=331.57 Aligned_cols=305 Identities=16% Similarity=0.213 Sum_probs=237.7
Q ss_pred CChh-HHHHHHHhhhcccCCCCC-cChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCCCCCCcEEEEeecccC
Q 018435 25 KSDD-SIIERFRAYLQIDTSQPN-PDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVV 102 (356)
Q Consensus 25 ~~~~-~~~~~l~~l~~i~s~s~~-~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~~~~~~il~~aH~Dtv 102 (356)
...+ ++++++++|++|||.++. .++.++++||.++|+++|++++..+ .++.+||+++++|.+++.|+|+|+||||||
T Consensus 40 ~~~~~~~~~~l~~l~~ips~s~~e~~~~~~~~~l~~~l~~~G~~~~~~~-~~~~~~v~a~~~g~~~~~~~i~l~aH~D~v 118 (481)
T 2pok_A 40 DHVAQHYFEVLRTLISKKSVFAQQVGLKEVANYLGEIFKRVGAEVEIDE-SYTAPFVMAHFKSSRPDAKTLIFYNHYDTV 118 (481)
T ss_dssp CHHHHHHHHHHHHHHHSCCCGGGCTTHHHHHHHHHHHHHHTTCEEEEEC-SSSSCEEEEEECCSSTTCCEEEEEEECCCC
T ss_pred hhhhHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHHHHHHHcCCEEEEec-CCCCcEEEEEecCCCCCCCeEEEEEeccCc
Confidence 3456 899999999999998532 2458999999999999999887533 245789999998753346899999999999
Q ss_pred CCCC-CCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHHHhccc-
Q 018435 103 PSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSH- 180 (356)
Q Consensus 103 p~~~-~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~- 180 (356)
|+++ ++|+.+||++.+ ++|++||||++|||++++++|+|++.|++.+..++++|+|+|+++||+|+ .|++.++++.
T Consensus 119 p~~~~~~w~~~pf~~~~-~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~-~g~~~~~~~~~ 196 (481)
T 2pok_A 119 PADGDQVWTEDPFTLSV-RNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISFIMEGAEESAS-TDLDKYLEKHA 196 (481)
T ss_dssp CSCSSCCCSSCTTSCEE-ETTEEESTTTTTTHHHHHHHHHHHHHHHHTCSSCSSEEEEEEESCGGGTT-TTHHHHHHHHH
T ss_pred CCCCccccccCCCCcee-eCCeEEccccccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEecccccCc-hhHHHHHHHhH
Confidence 9976 589999999998 89999999999999999999999999999855778999999999999986 6898888753
Q ss_pred -cccCCceEEEEecCccCcCCcceeEEeeeeeEEEEEEEEecC--CccCCCCCC-CHHHHHHHHHHHHHcchh-------
Q 018435 181 -VFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAP--GHGAKLYDN-SAMENLFKSIESVRRFRA------- 249 (356)
Q Consensus 181 -~~~~~~~~~~~~~g~~~p~~~~~i~~~~~G~~~~~v~~~G~~--~Hs~~p~~g-nai~~~~~~~~~i~~~~~------- 249 (356)
.+++.+++++.+.+... .+.+.+.++++|..+++|+++|++ +||+.|+.+ ||+..+++++..|.++..
T Consensus 197 ~~~~~~d~~i~~~~~~~~-~~~~~i~~~~~G~~~~~i~v~G~~g~~Hss~p~~g~nAi~~~a~~i~~l~~~~~~i~i~g~ 275 (481)
T 2pok_A 197 DKLRGADLLVWEQGTKNA-LEQLEISGGNKGIVTFDAKVKSADVDIHSSYGGVVESAPWYLLQALQSLRAADGRILVEGL 275 (481)
T ss_dssp HHHTTCSEEECSCCBBCT-TSCEEEECCBCEEEEEEEEEECSSSCEEGGGTTTBCCHHHHHHHHHHHTBCTTSCBCCTTT
T ss_pred hhccCCCEEEECCCCccC-CCCeeEEEecceeEEEEEEEecCCCCccccCCCCCCCHHHHHHHHHHHhhCCCCceeccch
Confidence 23336766666543211 123578889999999999999999 899999888 999999999998876430
Q ss_pred ---------hhHHHHHh-cc-------------c----c--------cCCceeeeEeeeecCCCCCCCccccccCCeEEE
Q 018435 250 ---------SQFDLVKA-GL-------------K----A--------EGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEA 294 (356)
Q Consensus 250 ---------~~~~~~~~-~~-------------~----~--------~~~~~~v~~~~i~~g~~~~~~~~~nvip~~~~~ 294 (356)
.....+.. .+ . . ....++++++.++||.. +..+.|+||++|++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~t~~vg~i~gG~~--~~~~~NvIP~~a~~ 353 (481)
T 2pok_A 276 YEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKRFFFDPALNIEGIQSGYQ--GQGVKTILPAEASA 353 (481)
T ss_dssp GGGSCCCCHHHHHHHHHHSCSCGGGHHHHHTCCSCCSSCSHHHHHHHHHHSCEEEEEEEEEECC--SSSCCCEECSEEEE
T ss_pred hhcCCCCCHHHHHHHHhcCcccHHHHHHhhCcccccccccchhHHHHHhhcCeEeEEeeecCCC--CCCCCeeccCeeEE
Confidence 00000000 00 0 0 00236899999998851 11268999999999
Q ss_pred EEEEecCCCCCHHHHHHHHHHHhcc-CCCCceEEEEeecccc
Q 018435 295 GFDIRVPPTTDAESLERRIVEEWAP-ASRNMTFEVVINSLSL 335 (356)
Q Consensus 295 ~~diR~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~ 335 (356)
.+++|+.+.++.+.+.++|++.+.. ...++++++....+++
T Consensus 354 ~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~v~~~~~~p~~ 395 (481)
T 2pok_A 354 KLEVRLVPGLEPHDVLEKIRKQLDKNGFDKVELYYTLGEMSY 395 (481)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHHHTTCTTEEEEEEEEECCB
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHhhCCCceEEEEccCCCcc
Confidence 9999999999999999999987762 2257777776544444
No 9
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=3.7e-41 Score=324.01 Aligned_cols=276 Identities=18% Similarity=0.231 Sum_probs=230.2
Q ss_pred ChhHHHHHHHhhhcccCCCCCc-ChhHHHHHHHHHHHHCCCceEEEeecC--CCceEEEEecCCCCCCCcEEEEeecccC
Q 018435 26 SDDSIIERFRAYLQIDTSQPNP-DYTNASKFILAQAEALSLESQTLEFAK--NKPLILLKWPGSNPQLPSILLNSHTDVV 102 (356)
Q Consensus 26 ~~~~~~~~l~~l~~i~s~s~~~-~e~~~~~~l~~~l~~~g~~~~~~~~~~--~~~nv~~~~~g~~~~~~~il~~aH~Dtv 102 (356)
..++++++|++|++|||+|... ++.++++||.++|+++|++++..+..+ ..+|++++++|++ .|+|+|+||||||
T Consensus 17 ~~~~~~~~l~~lv~i~s~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~v~a~~~g~~--~~~i~l~aH~D~v 94 (393)
T 1cg2_A 17 EQPAVIKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKGRG--GKNLLLMSHMDTV 94 (393)
T ss_dssp HHHHHHHHHHHHHTSCCBTTCHHHHHHHHHHHHHHHHHTTCEEEEEECSTTCCSEEEEEEEECSS--CCCEEEEEECCBS
T ss_pred hHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEecCcCCCCCeEEEEECCCC--CceEEEEEecCcC
Confidence 4578999999999999985321 347899999999999999987654321 2469999998653 3899999999999
Q ss_pred CCCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHHHhccccc
Q 018435 103 PSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVF 182 (356)
Q Consensus 103 p~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~ 182 (356)
|+. ++|+..||. + ++|++||||++|||++++++|++++.|++.+..++++|+|+|+++||.|+ .|++++++++.
T Consensus 95 p~~-~~~~~~Pf~--~-~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~-~G~~~~~~~~~- 168 (393)
T 1cg2_A 95 YLK-GILAKAPFR--V-EGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEKGS-FGSRDLIQEEA- 168 (393)
T ss_dssp CCT-THHHHSCCE--E-ETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEESCGGGTT-TTTHHHHHHHH-
T ss_pred CCC-CccccCCee--e-eCCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEEcccccCC-ccHHHHHHHHh-
Confidence 986 357777998 5 78999999999999999999999999999887778899999999999986 69999988643
Q ss_pred cCCceEEEEecCccCcCCcceeEEeeeeeEEEEEEEEecCCccC-CCCCC-CHHHHHHHHHHHHHcchhhhHHHHHhccc
Q 018435 183 NSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGA-KLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLK 260 (356)
Q Consensus 183 ~~~~~~~~~~~g~~~p~~~~~i~~~~~G~~~~~v~~~G~~~Hs~-~p~~g-nai~~~~~~~~~i~~~~~~~~~~~~~~~~ 260 (356)
...+++++++.+.. + ...++.+++|..+++|+++|+++|++ .|+.+ ||+..+++++..++.+...
T Consensus 169 ~~~d~~i~~e~~~~-~--~~~i~~~~~G~~~~~i~v~G~~~Hag~~p~~g~nAi~~~~~~i~~l~~~~~~---------- 235 (393)
T 1cg2_A 169 KLADYVLSFEPTSA-G--DEKLSLGTSGIAYVQVNITGKASHAGAAPELGVNALVEASDLVLRTMNIDDK---------- 235 (393)
T ss_dssp HHCSEEEECCCEET-T--SCEEESEECEEEEEEEEEECBCEETTSCGGGSBCHHHHHHHHHHHHGGGCBT----------
T ss_pred hcCCEEEEeCCCCC-C--CCcEEEeeeeeEEEEEEEEeeecccCCCcccCcCHHHHHHHHHHHHHhhhCc----------
Confidence 24677787764320 1 23788899999999999999999996 68888 9999999999999876432
Q ss_pred ccCCceeeeEeeeecCCCCCCCccccccCCeEEEEEEEecCCCCCHHHHHHHHHHHhcc-CCCCceEEEEe
Q 018435 261 AEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP-ASRNMTFEVVI 330 (356)
Q Consensus 261 ~~~~~~~v~~~~i~~g~~~~~~~~~nvip~~~~~~~diR~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~ 330 (356)
....+++++.++||. +.|+||++|++.+++|+.+.++.+.+.++|++.+.. ...++++++..
T Consensus 236 --~~~~~~~v~~i~gG~------~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~ 298 (393)
T 1cg2_A 236 --AKNLRFNWTIAKAGN------VSNIIPASATLNADVRYARNEDFDAAMKTLEERAQQKKLPEADVKVIV 298 (393)
T ss_dssp --TTTEEEEEEEEEECS------STTEECSEEEEEEEEEESSHHHHHHHHHHHHHHHTSCSSTTCEEEEEE
T ss_pred --ccCceEEEEEEeCCC------CCCEECcccEEEEEEeeCChhhHHHHHHHHHHHHhcccCCCcEEEEEe
Confidence 134789999999998 999999999999999999999999999999988762 34677777664
No 10
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=3.7e-41 Score=328.93 Aligned_cols=281 Identities=16% Similarity=0.104 Sum_probs=216.2
Q ss_pred CCCChhHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEee------------------------------
Q 018435 23 PAKSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEF------------------------------ 72 (356)
Q Consensus 23 ~~~~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~------------------------------ 72 (356)
++...+++++++++|+++|+. +.+|.+++++|.++|+++|++++....
T Consensus 9 ~~~~~~~~~~~~~~lh~~Pe~--~~~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 86 (445)
T 3io1_A 9 LRQLAPSMTQWRRDFHLHAES--GWLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERAREQGAPE 86 (445)
T ss_dssp HHTTHHHHHHHHHHHHHTCCC--TTCCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHTTTCCT
T ss_pred HHHHHHHHHHHHHHHHhCCCC--CCcHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhccccccc
Confidence 345678999999999999997 679999999999999999998765210
Q ss_pred -----c-CCCceEEEEecCCCCCCCcEEEEeecccCCCCC-CCCCCCCCCe---eeCCCCeEEecCcccchHHHHHHHHH
Q 018435 73 -----A-KNKPLILLKWPGSNPQLPSILLNSHTDVVPSEP-SKWSHHPFGA---HLDSQGNIFARGSQDMKCVGMQYLEA 142 (356)
Q Consensus 73 -----~-~~~~nv~~~~~g~~~~~~~il~~aH~Dtvp~~~-~~w~~~P~~~---~~~~~g~~~GrG~~D~k~~~a~~l~a 142 (356)
. .+.+|++++++|.++ +|+|+|+||||+||+.+ .+|+++||.. .. .+|++||||+ +++++++|.+
T Consensus 87 ~~~~~~~~~~~~vva~~~~~~~-g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~-~~G~~h~cGh---d~~~a~~l~a 161 (445)
T 3io1_A 87 RWLPAFEGGFAGVVATLDTGRP-GPTLAFRVDMDALDLNEQHDDSHRPHRDHFASC-NAGMMHACGH---DGHTAIGLGL 161 (445)
T ss_dssp TTGGGGTTTCCCEEEEEECSSC-CCEEEEEEECCCCCC--------------------------CTT---CTHHHHHHHH
T ss_pred cccccccCCCCEEEEEEeCCCC-CCEEEEEEecCCcCCCCCCCCCcCccccccccC-CCCceEecCc---hHHHHHHHHH
Confidence 0 156899999987654 48999999999999976 6899999986 34 7899999997 5899999999
Q ss_pred HHHHHHcCCCCcccEEEEEeeccccCccccHHHHhccccccCCceEEEEecCccCcCCcceeEEeeee---eEEEEEEEE
Q 018435 143 IRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERC---PWWLVIKAR 219 (356)
Q Consensus 143 ~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~~~~~g~~~p~~~~~i~~~~~G---~~~~~v~~~ 219 (356)
++.|++.+..++++|+|+|+++||++ .|++++++++.++++|.+++++.+...|.+ .+.++.+| ..+++|+++
T Consensus 162 a~~L~~~~~~~~g~v~l~f~p~EE~~--~Ga~~~i~~g~~~~~d~~~~~h~~~~~~~g--~i~~~~~g~~a~~~~~i~v~ 237 (445)
T 3io1_A 162 AHVLKQYAAQLNGVIKLIFQPAEEGT--RGARAMVAAGVVDDVDYFTAIHIGTGVPAG--TVVCGGDNFMATTKFDVQFS 237 (445)
T ss_dssp HHHHHHTGGGCCSEEEEEEESCTTTT--CHHHHHHHTTTTTTCSEEEEEEEEEEEETT--BEESCCCCBCEEEEEEEEEE
T ss_pred HHHHHhCcCcCCceEEEEEecccccc--chHHHHHHcCCccccceeEEEeccCCCCCC--eEEEecCCeeEEEEEEEEEE
Confidence 99999887778999999999999954 599999998878788988988764333443 44554443 579999999
Q ss_pred ecCCcc-CCCCCC-CHHHHHHHHHHHHHcchhhhHHHHHhcccccCCceeeeEeeeecCCCCCCCccccccCCeEEEEEE
Q 018435 220 GAPGHG-AKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFD 297 (356)
Q Consensus 220 G~~~Hs-~~p~~g-nai~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~i~~g~~~~~~~~~nvip~~~~~~~d 297 (356)
|+++|+ +.|+.+ ||+.++++++..|+.+... ..+.++++++.++||. +.|+||++|++.++
T Consensus 238 Gk~~HaGs~P~~g~nAi~~aa~~i~~l~~l~~~-----------~~~~~~~~vg~i~gG~------~~NvIP~~a~~~~~ 300 (445)
T 3io1_A 238 GVAAHAGGKPEDGRNALLAAAQAALGLHAIPPH-----------SAGASRVNVGVMQAGT------GRNVVPSSALLKVE 300 (445)
T ss_dssp CCCSSTTCCGGGCCCHHHHHHHHHHHHHTCCCB-----------TTBCEEEEEEEEEECS------CTTSCCCEEEEEEE
T ss_pred eecCCCCCCCcCCcCHHHHHHHHHHHHHHHHhh-----------cCCCeEEEEEEEecCC------CCceeCCeEEEEEE
Confidence 999999 689988 9999999999999887431 1234789999999997 99999999999999
Q ss_pred EecCCCCCHHHHHHHHHHHhcc--CCCCceEEEEee
Q 018435 298 IRVPPTTDAESLERRIVEEWAP--ASRNMTFEVVIN 331 (356)
Q Consensus 298 iR~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~ 331 (356)
+|+.+.++.+.+.++|++++.. ...++++++...
T Consensus 301 iR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~~i~~~ 336 (445)
T 3io1_A 301 TRGESEAINQYVFERAQHVVAGAAAMYEARYELRMM 336 (445)
T ss_dssp EEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred EecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEe
Confidence 9999999999999999877652 346777776653
No 11
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=100.00 E-value=2.3e-40 Score=326.39 Aligned_cols=288 Identities=16% Similarity=0.258 Sum_probs=228.4
Q ss_pred CCChhHHHHHHHhhhcccCCCCCc----ChhHHHHHHHHHHHHCCCceEEEeec-----CCC-----ceEEEEecCCCCC
Q 018435 24 AKSDDSIIERFRAYLQIDTSQPNP----DYTNASKFILAQAEALSLESQTLEFA-----KNK-----PLILLKWPGSNPQ 89 (356)
Q Consensus 24 ~~~~~~~~~~l~~l~~i~s~s~~~----~e~~~~~~l~~~l~~~g~~~~~~~~~-----~~~-----~nv~~~~~g~~~~ 89 (356)
+...+++++++++|++|||+++.. ++.++++||.++|+++|++++..... .+. +||++.+++. +.
T Consensus 16 ~~~~~~~~~~l~~l~~~ps~s~~e~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~~-~~ 94 (479)
T 2zog_A 16 DENQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLGKLGSD-PQ 94 (479)
T ss_dssp HHTHHHHHHHHHHHHHSCCBTTCGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCEEECTTSCEEECCCEEEEEECCC-TT
T ss_pred HHhHHHHHHHHHHHhcCCCccCCcccchHHHHHHHHHHHHHHHcCCeEEEeeccccccCCCcccCCCCEEEEEecCC-CC
Confidence 445688999999999999985322 24799999999999999988764421 233 8999999654 34
Q ss_pred CCcEEEEeecccCCCCC-CCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccC
Q 018435 90 LPSILLNSHTDVVPSEP-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIG 168 (356)
Q Consensus 90 ~~~il~~aH~Dtvp~~~-~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g 168 (356)
.|+|+|+|||||||+++ ++|+.+||++.+ ++|++||||+.|||++++++|+|++.|++.+..++++|+|+|+++||.|
T Consensus 95 ~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~-~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g 173 (479)
T 2zog_A 95 KKTVCIYGHLDVQPAALEDGWDSEPFTLVE-REGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFCLEGMEESG 173 (479)
T ss_dssp SCEEEEEEECCBCCCCGGGTCSSCTTSCEE-ETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEESCGGGT
T ss_pred CCeEEEEEecCCCCCCccccCcCCCCccee-ECCEEEeeccccChHHHHHHHHHHHHHHHhCCCCCCcEEEEEecccccC
Confidence 58999999999999975 689999999998 8999999999999999999999999999998888899999999999998
Q ss_pred ccccHHHHhccc---cccCCceEEEEecCccCcCCcceeEEeeeeeEEEEEEEEecC--CccCCCCCCCHHHHHHHHHHH
Q 018435 169 GHDGAEKFADSH---VFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAP--GHGAKLYDNSAMENLFKSIES 243 (356)
Q Consensus 169 ~~~G~~~~~~~~---~~~~~~~~~~~~~g~~~p~~~~~i~~~~~G~~~~~v~~~G~~--~Hs~~p~~gnai~~~~~~~~~ 243 (356)
+ .|++.++++. .+.+.+.+++++.+...+ +...++++++|..+++|+++|++ +||+.+ ..||+.++++++..
T Consensus 174 ~-~Ga~~~~~~~~~~~~~~~d~~i~~e~~~~~~-~~~~i~~~~~G~~~~~i~v~G~~~~~Hs~~~-g~~ai~~~~~~i~~ 250 (479)
T 2zog_A 174 S-EGLDELIFAQKDKFFKDVDYVCISDNYWLGK-NKPCITYGLRGICYFFIEVECSDKDLHSGVY-GGSVHEAMTDLISL 250 (479)
T ss_dssp C-TTHHHHHHHTTTTTTTTCCEEEECCCBCSSS-SSCEEEEEECEEEEEEEEEECCSSCEEHHHH-TTTSCCHHHHHHHH
T ss_pred C-ccHHHHHHhhhhhhcccCCEEEEeCCCcCCC-CCeEEEEecceEEEEEEEEEeCCCCCccCCC-CCCccCHHHHHHHH
Confidence 6 6999999864 233567777776543222 24578899999999999999999 999985 34899999999888
Q ss_pred HHcchhhh-------------------H----------HHHHhcccc--------------cCCceeeeEeeeecCCCCC
Q 018435 244 VRRFRASQ-------------------F----------DLVKAGLKA--------------EGEVVSVNMAFLKAGTPSP 280 (356)
Q Consensus 244 i~~~~~~~-------------------~----------~~~~~~~~~--------------~~~~~~v~~~~i~~g~~~~ 280 (356)
++++.... . +.+...+.. ....++++++.+++|..
T Consensus 251 l~~l~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~i~gg~~-- 328 (479)
T 2zog_A 251 MGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHSCKKDILMHRWRYPSLSLHGIEGAFS-- 328 (479)
T ss_dssp HTTSBCTTSCBCSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHHTCSSCSCSSHHHHHHHHHTSCEEEEEEEESSCC--
T ss_pred HHhcCCCCCCEecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccccchHHHHHHhhcCCCeEEeeeecCCc--
Confidence 87654320 0 000000000 00136889999998821
Q ss_pred CCccccccCCeEEEEEEEecCCCCCHHHHHHHHHHHhc
Q 018435 281 NGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWA 318 (356)
Q Consensus 281 ~~~~~nvip~~~~~~~diR~~~~~~~~~~~~~i~~~~~ 318 (356)
++.+.|+||++|++.+++|+.|.++.+.+.++|++.+.
T Consensus 329 g~~~~NvIP~~a~~~~~~R~~~~~~~~~v~~~i~~~~~ 366 (479)
T 2zog_A 329 GSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLS 366 (479)
T ss_dssp SSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred CCCCccccCCceEEEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 11289999999999999999999999999999987665
No 12
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=100.00 E-value=3.8e-41 Score=320.73 Aligned_cols=259 Identities=20% Similarity=0.253 Sum_probs=218.3
Q ss_pred hhHHHHHHHhhhcccCCCCC-cChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCC-CCCCCcEEEEeecccCCC
Q 018435 27 DDSIIERFRAYLQIDTSQPN-PDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGS-NPQLPSILLNSHTDVVPS 104 (356)
Q Consensus 27 ~~~~~~~l~~l~~i~s~s~~-~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~-~~~~~~il~~aH~Dtvp~ 104 (356)
.+++++++++|++|||+++. ++|.++++||.++|+++|++++.. .+|+++.++|+ +.+.|+|+|+|||||||.
T Consensus 5 ~~~~~~~l~~l~~ips~s~~~~~e~~~~~~l~~~l~~~G~~~~~~-----~~~~~~~~~~~~~~~~~~i~l~aH~D~vp~ 79 (364)
T 2rb7_A 5 MQHIVELTSDLIRFPSMHSRPEQISRCAGFIMDWCAQNGIHAERM-----DHDGIPSVMVLPEKGRAGLLLMAHIDVVDA 79 (364)
T ss_dssp HHHHHHHHHHHHTSCCCTTCHHHHHHHHHHHHHHHHHTTCCCEEE-----EETTEEEEEECSBTTEEEEEEEEECCCCCC
T ss_pred HHHHHHHHHHHHcCCCCCCCcchHHHHHHHHHHHHHHcCCeEEEe-----cCCCceEEEEEcCCCCCeEEEECccCcCCC
Confidence 47899999999999998533 578899999999999999988763 25678888652 223589999999999975
Q ss_pred CCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCC---ccc--EEEEEeeccccCccccHHHHhcc
Q 018435 105 EPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQP---VRS--VYLSFVPDEEIGGHDGAEKFADS 179 (356)
Q Consensus 105 ~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~---~~~--i~~~~~~~EE~g~~~G~~~~~~~ 179 (356)
+.+||.+.+ ++|++||||++|||++++++|++++.|++.+..+ +++ |+|+|+++||.|+..|+++++++
T Consensus 80 -----~~~p~~~~~-~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~~v~~~~~~~EE~~g~~G~~~~~~~ 153 (364)
T 2rb7_A 80 -----EDDLFVPRV-ENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDMALGLLITGDEEIGGMNGAAKALPL 153 (364)
T ss_dssp -----CGGGGSCEE-ETTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEESCGGGTSTTTHHHHGGG
T ss_pred -----CCCCCccEE-ECCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCccEEEEEEeccccCchhhHHHHHhc
Confidence 478999998 8999999999999999999999999999876555 568 99999999998555799999986
Q ss_pred ccccCCceEEEEecCccCcCCcceeEEeeeeeEEEEEEEEecCCccCCCCCC-CHHHHHHHHHHHHHcchhhhHHHHHhc
Q 018435 180 HVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAG 258 (356)
Q Consensus 180 ~~~~~~~~~~~~~~g~~~p~~~~~i~~~~~G~~~~~v~~~G~~~Hs~~p~~g-nai~~~~~~~~~i~~~~~~~~~~~~~~ 258 (356)
. +.+++++++.+ +|.+ ++++++|..+++|+++|+++|++.|+.+ ||+..+++++..++.+.. ++
T Consensus 154 ~---~~d~~i~~d~~--~p~~---i~~~~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~-------~~ 218 (364)
T 2rb7_A 154 I---RADYVVALDGG--NPQQ---VITKEKGIIDIKLTCTGKAAHGARPWMGVNAVDLLMEDYTRLKTLFA-------EE 218 (364)
T ss_dssp C---EEEEEEECSSS--BTTE---EEEEECEEEEEEEEEECBCEETTSGGGSBCHHHHHHHHHHHHHTTSC-------CC
T ss_pred C---CCCEEEEccCC--cccc---eEEEeeeEEEEEEEEEeecccCCCCCCCcCHHHHHHHHHHHHHhhcc-------ch
Confidence 5 45677776643 3543 8999999999999999999999999888 999999999999987521 00
Q ss_pred ccccCCceeeeEeeeecCCCCCCCccccccCCeEEEEEEEecCCCCCHHHHHHHHHHHhc
Q 018435 259 LKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWA 318 (356)
Q Consensus 259 ~~~~~~~~~v~~~~i~~g~~~~~~~~~nvip~~~~~~~diR~~~~~~~~~~~~~i~~~~~ 318 (356)
.. ..+.++++++.++||. +.|+||++|++.+|+|+.+.++.+++.++|++.+.
T Consensus 219 ~~-~~~~~~~~vg~i~gG~------~~NviP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~ 271 (364)
T 2rb7_A 219 NE-DHWHRTVNLGRIRAGE------STNKVPDVAEGWFNIRVTEHDDPGALIDKIRKTVS 271 (364)
T ss_dssp CT-TCCSCEEEEEEEEECS------CTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHCS
T ss_pred hh-cCCCceEEEEEEecCC------cCcccCcceEEEEEEeeCCCCCHHHHHHHHHHHhh
Confidence 00 0034799999999998 99999999999999999999999999999998775
No 13
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.3e-39 Score=310.71 Aligned_cols=274 Identities=18% Similarity=0.234 Sum_probs=223.5
Q ss_pred CChhHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCc-eEEEeecCCCceEEEEecCCCCCCCcEEEEeecccCC
Q 018435 25 KSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLE-SQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVP 103 (356)
Q Consensus 25 ~~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~-~~~~~~~~~~~nv~~~~~g~~~~~~~il~~aH~Dtvp 103 (356)
...+++++++++|+++||+ +++|.++++||.++|+++|++ ++... ..+|+++.+++. +.|+|+|+|||||||
T Consensus 10 ~~~~~~~~~~~~l~~~ps~--s~~e~~~~~~l~~~l~~~G~~~~~~~~---~~~~~~a~~~~~--~~~~v~l~~H~D~vp 82 (369)
T 3tx8_A 10 DLLGDPIVLTQRLVDIPSP--SGQEKQIADEIEDALRNLNLPGVEVFR---FNNNVLARTNRG--LASRVMLAGHIDTVP 82 (369)
T ss_dssp CCCSCHHHHHHHHHSSCCB--TTCTHHHHHHHHHHHHTTTCTTCEEEE---ETTEEEEECCCC--CSCEEEEEEECCBSC
T ss_pred ccHHHHHHHHHHHhcCCCC--CccHHHHHHHHHHHHHhcCCCCcEEec---cCCcEEEEecCC--CCCeEEEEcccCccC
Confidence 3457899999999999997 578999999999999999873 44322 246899999765 358999999999999
Q ss_pred CCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCcc-ccHHHHhccc-c
Q 018435 104 SEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGH-DGAEKFADSH-V 181 (356)
Q Consensus 104 ~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~-~G~~~~~~~~-~ 181 (356)
+++ ||.+.+ ++|++||||++|||++++++|+|++.|++. ..++++|+|+|+++||.|+. .|++++++.+ .
T Consensus 83 ~~~------~~~~~~-~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~-~~~~~~v~~~~~~~EE~g~~~~G~~~~~~~~~~ 154 (369)
T 3tx8_A 83 IAD------NLPSRV-EDGIMYGCGTVDMKSGLAVYLHTFATLATS-TELKHDLTLIAYECEEVADHLNGLGHIRDEHPE 154 (369)
T ss_dssp CCS------CCSCEE-CSSEEESSSTTTTHHHHHHHHHHHHHHTSC-TTCCSEEEEEEECCCSSCTTSCHHHHHHHHCGG
T ss_pred CCC------CCCCeE-ECCEEEcCCcccchHHHHHHHHHHHHHHhh-cCCCccEEEEEEeccccCcccccHHHHHHhccc
Confidence 874 677778 899999999999999999999999999875 36789999999999999852 4899998864 1
Q ss_pred ccCCceEEEEecCccCcCCcceeEEeeeeeEEEEEEEEecCCccCCCCCC-CHHHHHHHHHHHHHcchhhhHHHHHhccc
Q 018435 182 FNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLK 260 (356)
Q Consensus 182 ~~~~~~~~~~~~g~~~p~~~~~i~~~~~G~~~~~v~~~G~~~Hs~~p~~g-nai~~~~~~~~~i~~~~~~~~~~~~~~~~ 260 (356)
..+.+++++.+ |+. ..++++.+|..+++|+++|+++|++.|+.+ ||+..+++++..++++..... ...
T Consensus 155 ~~~~~~~i~~e-----p~~-~~i~~~~~G~~~~~i~v~G~~~Ha~~p~~g~nAi~~~a~~i~~l~~~~~~~~-----~~~ 223 (369)
T 3tx8_A 155 WLAADLALLGE-----PTG-GWIEAGCQGNLRIKVTAHGVRAHSARSWLGDNAMHKLSPIISKVAAYKAAEV-----NID 223 (369)
T ss_dssp GGCCSEEEECC-----CCT-TCEEESBCEEEEEEEEEECBCCBTTSGGGSBCTGGGGHHHHHHHHHCCCCEE-----EET
T ss_pred ccCCCEEEEeC-----CCC-CceeeecceEEEEEEEEeeeccccCCCCcCcCHHHHHHHHHHHHHhhccccc-----ccC
Confidence 22456666654 432 478899999999999999999999999988 999999999999987643210 000
Q ss_pred ccCCceeeeEeeeecCCCCCCCccccccCCeEEEEEEEecCCCCCHHHHHHHHHHHhcc-CCCCceEEEEe
Q 018435 261 AEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP-ASRNMTFEVVI 330 (356)
Q Consensus 261 ~~~~~~~v~~~~i~~g~~~~~~~~~nvip~~~~~~~diR~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~ 330 (356)
......+++++.+++|. +.|+||++|++.+|+|+.+.++.+++.++|++.+.. ...++++++..
T Consensus 224 ~~~~~~~~~vg~i~gG~------~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~g~~~~~~~ 288 (369)
T 3tx8_A 224 GLTYREGLNIVFCESGV------ANNVIPDLAWMNLNFRFAPNRDLNEAIEHVVETLELDGQDGIEWAVED 288 (369)
T ss_dssp TEEEECEEEEEEEEECS------BTTBCCSEEEEEEEEEECTTSCHHHHHHHHHHHTTTTTSTTEEEEEEE
T ss_pred CcccCceEEEEEEECCC------CCccccCcEEEEEEEecCCCCCHHHHHHHHHHHHHhcccCCeEEEEEe
Confidence 01114689999999987 999999999999999999999999999999987762 13577777753
No 14
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=1.3e-40 Score=321.44 Aligned_cols=276 Identities=16% Similarity=0.161 Sum_probs=212.9
Q ss_pred ChhHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCCCCCCcEEEEeecccCCCC
Q 018435 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (356)
Q Consensus 26 ~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~~~~~~il~~aH~Dtvp~~ 105 (356)
..+++++++++|++|||. +++|.++++||.++|+++|++++.. ..+.+|+++.++|+++ .|+|+|+|||||||++
T Consensus 30 ~~~~~i~~~~~l~~ips~--s~~e~~~~~~l~~~l~~~G~~v~~~--~~~~~nv~a~~~g~~~-~~~i~l~~H~D~vp~~ 104 (404)
T 1ysj_A 30 FHTRLINMRRDLHEHPEL--SFQEVETTKKIRRWLEEEQIEILDV--PQLKTGVIAEIKGRED-GPVIAIRADIDALPIQ 104 (404)
T ss_dssp HHHHHHHHHHHHHHSCCC--TTCCHHHHHHHHHHHHHTTCEECCC--TTCSSCEEEEEECSSC-CCEEEEEEECCCBSCC
T ss_pred HHHHHHHHHHHHHhcCCC--CCChHHHHHHHHHHHHHcCCceEEe--ccCCceEEEEEeCCCC-CCEEEEEEecccccCC
Confidence 457899999999999997 5689999999999999999987542 1246799999987643 4899999999999986
Q ss_pred CCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHHHhccccccCC
Q 018435 106 PSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSL 185 (356)
Q Consensus 106 ~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~ 185 (356)
+ |+.+||++. .+|++||||+ |++++++|++++.|++.+..++++|+|+|+++||+ + .|++++++++.++..
T Consensus 105 ~--~~~~Pf~~~--~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~-~-~G~~~~~~~g~~~~~ 175 (404)
T 1ysj_A 105 E--QTNLPFASK--VDGTMHACGH---DFHTASIIGTAMLLNQRRAELKGTVRFIFQPAEEI-A-AGARKVLEAGVLNGV 175 (404)
T ss_dssp C--CCCCTTCCS--STTCBCTTSH---HHHHHHHHHHHHHHHTCGGGCSSEEEEEEESCTTT-T-CHHHHHHHTTTTTTE
T ss_pred C--CCCCCcccC--CCCceEcCcC---hHHHHHHHHHHHHHHhccccCCceEEEEEeccccc-c-hhHHHHHhcCCCcCC
Confidence 3 999999986 6899999995 89999999999999987767889999999999998 4 599999987666556
Q ss_pred ceEEEEecCccCcCCcceeEEe--eeeeEEEEEEEEecCCccCCCCCC-CHHHHHHHHHHHHHcchhhhHHHHHhccccc
Q 018435 186 NVGIVLDEGLASTTEDYRAFYA--ERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAE 262 (356)
Q Consensus 186 ~~~~~~~~g~~~p~~~~~i~~~--~~G~~~~~v~~~G~~~Hs~~p~~g-nai~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 262 (356)
+..+.++.....+.+.+.+..| .+|..+++|+++|+++|++.|+.+ ||+..+++++..+.++.....+ .
T Consensus 176 d~~i~~h~ep~~~~g~v~~~~g~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~~~~i~~l~~~~~~~~~--------~ 247 (404)
T 1ysj_A 176 SAIFGMHNKPDLPVGTIGVKEGPLMASVDRFEIVIKGKGGHASIPNNSIDPIAAAGQIISGLQSVVSRNIS--------S 247 (404)
T ss_dssp EEEEEEEEETTSCTTEEEECSEEEECCEEEEEEEEECC--------CCCCHHHHHHHHHHHHC-----------------
T ss_pred CEEEEEecCCCCCCceEEeccChhhcccceEEEEEEccCccccCcccCCCHHHHHHHHHHHHHHHHhhhcC--------C
Confidence 6666664321122222223334 678999999999999999999988 9999999999998765321111 1
Q ss_pred CCceeeeEeeeecCCCCCCCccccccCCeEEEEEEEecCCCCCHHHHHHHHHHHhcc--CCCCceEEEE
Q 018435 263 GEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP--ASRNMTFEVV 329 (356)
Q Consensus 263 ~~~~~v~~~~i~~g~~~~~~~~~nvip~~~~~~~diR~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~ 329 (356)
...++++++.++||. +.|+||++|++.+|+|+.+.++.+++.++|++.+.. ...++++++.
T Consensus 248 ~~~~~~~vg~i~gG~------~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~g~~~~~~ 310 (404)
T 1ysj_A 248 LQNAVVSITRVQAGT------SWNVIPDQAEMEGTVRTFQKEARQAVPEHMRRVAEGIAAGYGAQAEFK 310 (404)
T ss_dssp --CCEEEEEEEEECS------CSSSCCSEEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCcEEEEEEEEcCC------CCceecCceEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 124689999999998 999999999999999999999999999999877652 2456666654
No 15
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=100.00 E-value=3.8e-39 Score=307.85 Aligned_cols=269 Identities=18% Similarity=0.191 Sum_probs=222.8
Q ss_pred CChhHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEee----cCCCceEEEEecCCCCCCCcEEEEeecc
Q 018435 25 KSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEF----AKNKPLILLKWPGSNPQLPSILLNSHTD 100 (356)
Q Consensus 25 ~~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~----~~~~~nv~~~~~g~~~~~~~il~~aH~D 100 (356)
.+.+++++++++|+++||. +++|.++++||.++|+++|++++.... ..+.+|+++.++|++++.|+|+|+||||
T Consensus 3 ~~~~~~~~~l~~l~~~ps~--s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nv~a~~~g~~~~~~~v~l~aH~D 80 (373)
T 3gb0_A 3 INQERLVNEFMELVQVDSE--TKFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMD 80 (373)
T ss_dssp SCHHHHHHHHHHHHTSCCB--TTCCHHHHHHHHHHHHHTTCEEEECSCHHHHCCSSCCEEEEECCSSTTCCCEEEEEECC
T ss_pred CCHHHHHHHHHHHhcccCC--CccHHHHHHHHHHHHHHCCCEEEEeccccccCCCceeEEEEecCCCCCCCEEEEEEECc
Confidence 3568899999999999997 678999999999999999998875221 1246899999988644568999999999
Q ss_pred cCCCCCCCCCCCCCCeeeCCCCeEEecCc----ccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHHH
Q 018435 101 VVPSEPSKWSHHPFGAHLDSQGNIFARGS----QDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKF 176 (356)
Q Consensus 101 tvp~~~~~w~~~P~~~~~~~~g~~~GrG~----~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~ 176 (356)
+||+++ ||++.+ ++|++||||+ +|||++++++|.+++.|++.+. ++++|.|+|+++||.|+ .|++.+
T Consensus 81 ~vp~~~------~~~p~~-~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~~~~~~~EE~g~-~Ga~~~ 151 (373)
T 3gb0_A 81 TVVPGN------GIKPSI-KDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHGTIEFIITVGEESGL-VGAKAL 151 (373)
T ss_dssp BCSSCS------SCCCEE-ETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTC-CCCCEEEEEESCGGGTS-HHHHHS
T ss_pred ccCCCC------CcCcEE-ECCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEEEEEEeccccCc-hhhhhh
Confidence 999863 455667 8999999999 7999999999999999998875 68999999999999985 699988
Q ss_pred hccccccCCceEEEEecCccCcCCcceeEEeeeeeEEEEEEEEecCCccC-CCCCC-CHHHHHHHHHHHHHcchhhhHHH
Q 018435 177 ADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGA-KLYDN-SAMENLFKSIESVRRFRASQFDL 254 (356)
Q Consensus 177 ~~~~~~~~~~~~~~~~~g~~~p~~~~~i~~~~~G~~~~~v~~~G~~~Hs~-~p~~g-nai~~~~~~~~~i~~~~~~~~~~ 254 (356)
.... + ..+++++++.+. + ...+.++.+|..+++|+++|+++|++ .|+.+ ||+..+++++..++..+
T Consensus 152 ~~~~-~-~~~~~~~~~~~~--~--~g~i~~~~~g~~~~~i~~~G~~~Ha~~~p~~g~nai~~~~~~i~~l~~~~------ 219 (373)
T 3gb0_A 152 DRER-I-TAKYGYALDSDG--K--VGEIVVAAPTQAKVNAIIRGKTAHAGVAPEKGVSAITIAAKAIAKMPLGR------ 219 (373)
T ss_dssp CGGG-C-CCSEEEEEEECS--C--TTEEEEEECEEEEEEEEEECBCCBTTTCGGGSBCHHHHHHHHHTTSCCEE------
T ss_pred CHHh-c-CCCEEEEEcCCC--C--CCeEEEcCCCcEEEEEEEEeEecCCCCChhhCcCHHHHHHHHHHhccccc------
Confidence 6532 2 457788887542 2 23788899999999999999999999 79999 99999999988775421
Q ss_pred HHhcccccCCceeeeEeeeecCCCCCCCccccccCCeEEEEEEEecCCCCCHHHHHHHHHHHhcc--CCCCceEEEE
Q 018435 255 VKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP--ASRNMTFEVV 329 (356)
Q Consensus 255 ~~~~~~~~~~~~~v~~~~i~~g~~~~~~~~~nvip~~~~~~~diR~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~ 329 (356)
.....+++++.+++|. +.|+||++|++.+|+|+.+.++.+++.++|++.+.. ...++++++.
T Consensus 220 -------~~~~~~~~vg~i~gG~------~~Nvip~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~i~ 283 (373)
T 3gb0_A 220 -------IDSETTANIGRFEGGT------QTNIVCDHVQIFAEARSLINEKMEAQVAKMKEAFETTAKEMGGHADVE 283 (373)
T ss_dssp -------EETTEEEEEEEEEECS------CTTBCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred -------CCCccccceeEEecCc------ccccccceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 1123688999999997 999999999999999999999999999999876652 3356666554
No 16
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=100.00 E-value=5.7e-40 Score=318.21 Aligned_cols=271 Identities=17% Similarity=0.145 Sum_probs=209.4
Q ss_pred hHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCCCCCCcEEEEeecccCCCCCC
Q 018435 28 DSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEPS 107 (356)
Q Consensus 28 ~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~~~~~~il~~aH~Dtvp~~~~ 107 (356)
+++++++++|++|||+ +++|.++++||.++|+++|++++... +.+|++++++|.++ |+|+|+|||||||+++
T Consensus 28 ~~~i~~~~~l~~ips~--s~~e~~~~~~l~~~l~~~G~~v~~~~---~~~~l~a~~~~~~~--~~i~l~aH~D~vp~~~- 99 (418)
T 1xmb_A 28 DWMVKIRRKIHENPEL--GYEELETSKLIRSELELIGIKYRYPV---AITGVIGYIGTGEP--PFVALRADMDALPIQE- 99 (418)
T ss_dssp HHHHHHHHHHHHSCCC--TTCCHHHHHHHHHHHHHHTCCEEEEE---TTTEEEEEEESSSS--CEEEEEEECCCBSCCC-
T ss_pred HHHHHHHHHHHhCCCC--CCChHHHHHHHHHHHHHcCCeeEecc---CCcEEEEEEcCCCC--CEEEEEecccccCCCC-
Confidence 7899999999999997 56899999999999999999887522 46899999987543 7999999999999864
Q ss_pred CCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHHHhccccccCCce
Q 018435 108 KWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNV 187 (356)
Q Consensus 108 ~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~ 187 (356)
|+.+||++. ++|++||||+ |++++++|+|++.|++.+..++++|+|+|+++|| |+ .|++++++++.+++.|.
T Consensus 100 -~~~~pf~~~--~~g~~~g~G~---d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE-g~-~G~~~~~~~g~~~~~d~ 171 (418)
T 1xmb_A 100 -GVEWEHKSK--IAGKMHACGH---DGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEE-GL-SGAKKMREEGALKNVEA 171 (418)
T ss_dssp -CCCSTTCCS--STTCBCCSSH---HHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTT-TT-CHHHHHHHTTTTTTEEE
T ss_pred -CCCCCcccC--CCCceEeCCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecccc-cc-ccHHHHHHcCCcCCCCE
Confidence 999999974 7899999996 6999999999999999887789999999999999 75 69999998776655677
Q ss_pred EEEEecCccCcCCc--ceeEEeeeeeEEEEEEEEecCCccCCCCCC-CHHHHHHHHHHHHHcchhhhHHHHHhcccccCC
Q 018435 188 GIVLDEGLASTTED--YRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGE 264 (356)
Q Consensus 188 ~~~~~~g~~~p~~~--~~i~~~~~G~~~~~v~~~G~~~Hs~~p~~g-nai~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 264 (356)
+++++.....|.+. ..+..+++|..+++|+++|+++|++.|+.+ ||+.++++++..++.+..... + ...
T Consensus 172 ~i~~~~~~~~~~g~~~~~~~~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~----~----~~~ 243 (418)
T 1xmb_A 172 IFGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRET----D----PLD 243 (418)
T ss_dssp EEEEEEEEEEETTCEEECSEEEECEEEEEEEEEEEC---------CCHHHHHHHHHHHHHHTTCBCCS----S----GGG
T ss_pred EEEEecCCCCCCceeEeeeccccccceeEEEEEEecCcccCCCccCCCHHHHHHHHHHHHHHHHhccc----C----CCC
Confidence 77765432245443 245668899999999999999999999998 999999999999987642110 0 112
Q ss_pred ceeeeEeeeecCCCCCCCccccccCCeEEEEEEEecCCCCCHHHHHHHHHHHhcc--CCCCceEEEEe
Q 018435 265 VVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP--ASRNMTFEVVI 330 (356)
Q Consensus 265 ~~~v~~~~i~~g~~~~~~~~~nvip~~~~~~~diR~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~ 330 (356)
.++++++.++||. +.|+||++|++.+++|+.+ +.+++.++|++.+.. ...++++++..
T Consensus 244 ~~t~~vg~i~gG~------~~NvIP~~a~~~~diR~~~--~~~~i~~~i~~~~~~~a~~~g~~~~~~~ 303 (418)
T 1xmb_A 244 SKVVTVSKVNGGN------AFNVIPDSITIGGTLRAFT--GFTQLQQRVKEVITKQAAVHRCNASVNL 303 (418)
T ss_dssp CEEEEEEEEC--------------CCEEEEEEEEEESS--CHHHHHHHHHHHHHHHHHHTTEEEEEES
T ss_pred CcEEEEEEEEecC------cCCcCCCeEEEEEEEccCc--HHHHHHHHHHHHHHHHHHHhCCeEEEEE
Confidence 3689999999998 9999999999999999999 899999999877652 24677777764
No 17
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=100.00 E-value=9.1e-39 Score=307.63 Aligned_cols=276 Identities=16% Similarity=0.235 Sum_probs=223.8
Q ss_pred hhcCCCCChhHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEee----cCCCceEEEEecCC--CCCCCc
Q 018435 19 IFSSPAKSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEF----AKNKPLILLKWPGS--NPQLPS 92 (356)
Q Consensus 19 ~~~~~~~~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~----~~~~~nv~~~~~g~--~~~~~~ 92 (356)
....+....+++++++++|++|||. +++|.++++||.++|+++|++++.... ..+.+|+++.++|+ +++.|+
T Consensus 15 ~~~~~~~~~~~~~~~l~~L~~ips~--s~~E~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nvia~~~g~~~~~~~~~ 92 (396)
T 3rza_A 15 LYFQGMINEQRLLNTFLELVQIDSE--TGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVPK 92 (396)
T ss_dssp ----CCSCHHHHHHHHHHHHTSCCB--TTCTTTHHHHHHHHHHHTTCEEEECSGGGSTTCSSCCEEEEECCCCC---CCC
T ss_pred eeEEEeecHHHHHHHHHHHeecCCC--CcCHHHHHHHHHHHHHHCCCEEEEeccccccCCCCceEEEEECCcCCCCCCCe
Confidence 3445677889999999999999997 678999999999999999998875221 12468999999886 234589
Q ss_pred EEEEeecccCCCCCCCCCCCCCCeeeCCC-CeEEecCc----ccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeecccc
Q 018435 93 ILLNSHTDVVPSEPSKWSHHPFGAHLDSQ-GNIFARGS----QDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI 167 (356)
Q Consensus 93 il~~aH~Dtvp~~~~~w~~~P~~~~~~~~-g~~~GrG~----~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 167 (356)
|+|+|||||||+++ +|++.+ ++ |++||||+ +|||++++++|.+++.|++.+. ++++|.|+|+++||.
T Consensus 93 i~l~aH~D~vp~g~------~~~p~~-~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~~~~~~~EE~ 164 (396)
T 3rza_A 93 LYLTSHMDTVVPAI------NVKPIV-KDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQI-PHGQIQFVITVGEES 164 (396)
T ss_dssp EEEEEECCBCSSCS------SCCCEE-CTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHTC-CCCCEEEEEESCGGG
T ss_pred EEEEEECCccCCCC------CcceEE-ecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEEEEEEccccc
Confidence 99999999999863 345566 55 99999999 7999999999999999998874 579999999999999
Q ss_pred CccccHHHHhccccccCCceEEEEecCccCcCCcceeEEeeeeeEEEEEEEEecCCccCCCCCC-CHHHHHHHHHHHHHc
Q 018435 168 GGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRR 246 (356)
Q Consensus 168 g~~~G~~~~~~~~~~~~~~~~~~~~~g~~~p~~~~~i~~~~~G~~~~~v~~~G~~~Hs~~p~~g-nai~~~~~~~~~i~~ 246 (356)
|+ .|++.+.+.. + ..+++++++.+. + ...++++.+|..+++|+++|+++|++.|+.+ ||+..+++++..++.
T Consensus 165 g~-~Ga~~~~~~~-~-~~~~~~~~~~~~--~--~g~i~~~~~g~~~~~i~v~G~~~Ha~~p~~g~nai~~~~~~i~~l~~ 237 (396)
T 3rza_A 165 GL-IGAKELNSEL-L-DADFGYAIDASA--D--VGTTVVGAPTQMLISAKIIGKTAHASTPKEGVSAINIAAKAISRMKL 237 (396)
T ss_dssp TS-HHHHHCCGGG-C-CCSEEEEEEESS--C--TTCEEEEECEEEEEEEEEECBCCBTTSGGGSBCHHHHHHHHHHHSCC
T ss_pred cc-HhHhhhchhh-c-ccceEEEEecCC--C--cceEEEcCCceEEEEEEEEeEecCCCCccccccHHHHHHHHHHhccc
Confidence 86 6999887643 2 356788887542 2 2378899999999999999999999999999 999999999988865
Q ss_pred chhhhHHHHHhcccccCCceeeeEeeeecCCCCCCCccccccCCeEEEEEEEecCCCCCHHHHHHHHHHHhcc--CCCCc
Q 018435 247 FRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP--ASRNM 324 (356)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~v~~~~i~~g~~~~~~~~~nvip~~~~~~~diR~~~~~~~~~~~~~i~~~~~~--~~~~~ 324 (356)
.+. ....+++++.+++|. +.|+||++|++.+++|+.+.++.+.+.++|++.+.. ...++
T Consensus 238 ~~~-------------~~~~~~~vg~i~gG~------~~NvIP~~a~~~~diR~~~~~~~~~~~~~i~~~~~~~a~~~g~ 298 (396)
T 3rza_A 238 GQV-------------DEITTANIGKFHGGS------ATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGG 298 (396)
T ss_dssp EEE-------------ETTEEEEEEEEEECS------CTTBCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCC-------------CCCceeeeeEEecCC------CCcccCceEEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 321 123788999999997 999999999999999999999999999999877652 33566
Q ss_pred eEEEEe
Q 018435 325 TFEVVI 330 (356)
Q Consensus 325 ~~~~~~ 330 (356)
++++..
T Consensus 299 ~~~i~~ 304 (396)
T 3rza_A 299 KAEVTV 304 (396)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 665543
No 18
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=100.00 E-value=1.5e-39 Score=316.78 Aligned_cols=274 Identities=18% Similarity=0.175 Sum_probs=219.8
Q ss_pred hhHHHHHHHhhhcccCCCCCc--------ChhHHHHHHHHHHHHCCCc-eEEEeecCCCceEEEEecCCCC-CCCcEEEE
Q 018435 27 DDSIIERFRAYLQIDTSQPNP--------DYTNASKFILAQAEALSLE-SQTLEFAKNKPLILLKWPGSNP-QLPSILLN 96 (356)
Q Consensus 27 ~~~~~~~l~~l~~i~s~s~~~--------~e~~~~~~l~~~l~~~g~~-~~~~~~~~~~~nv~~~~~g~~~-~~~~il~~ 96 (356)
.++++++|++|++|||.|+.+ +|.++++||.++|+++|++ ++. +..+||+++++|+++ +.|+|+|+
T Consensus 26 ~~~~~~~l~~lv~i~s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~----d~~~nv~a~~~g~~~~~~~~v~l~ 101 (434)
T 3ife_A 26 KEELIERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLTEVTM----DDNGYVMATLPANTDKDVPVIGFL 101 (434)
T ss_dssp HHHHHHHHHHHHTSCCBCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCEEEEE----CTTSCEEEEECCBSSSCCCCEEEE
T ss_pred HHHHHHHHHhhEEeeccCCCccCCCCCCHHHHHHHHHHHHHHHHcCCceEEE----CCCcEEEEEeCCCCCCCCCeEEEE
Confidence 478999999999999986422 6789999999999999996 664 568999999998764 46899999
Q ss_pred eecccCCCCCCCCCCCCCCeeeC---------------------------CCCeEEecCc----ccchHHHHHHHHHHHH
Q 018435 97 SHTDVVPSEPSKWSHHPFGAHLD---------------------------SQGNIFARGS----QDMKCVGMQYLEAIRR 145 (356)
Q Consensus 97 aH~Dtvp~~~~~w~~~P~~~~~~---------------------------~~g~~~GrG~----~D~k~~~a~~l~a~~~ 145 (356)
||+||||.. .+|..+||..... .+++|||||+ +|||++++++|+|++.
T Consensus 102 ~H~DtVp~~-~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i~grG~t~~~~D~K~gva~~l~a~~~ 180 (434)
T 3ife_A 102 AHLDTATDF-TGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDKAGLTEIMVAMNY 180 (434)
T ss_dssp EECCBCTTS-CCSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEEECCSSSCCCHHHHHHHHHHHHHHHH
T ss_pred EEcccCCCC-CCCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEEECCCccchhhhhHHHHHHHHHHHHH
Confidence 999999975 4799999864320 1269999997 9999999999999999
Q ss_pred HHHcCCCCcccEEEEEeeccccCccccHHHHhccccccCCceEEEEecCccCcCCcceeEEeeeeeEEEEEEEEecCCcc
Q 018435 146 LKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHG 225 (356)
Q Consensus 146 l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~~~~~g~~~p~~~~~i~~~~~G~~~~~v~~~G~~~Hs 225 (356)
|++.+..++++|.|+|+++||+| .|++++... .+ ..+.++++|.+ +. ..++++.+|..+++|+++|+++||
T Consensus 181 L~~~~~~~~~~i~~if~~~EE~g--~Ga~~~~~~-~~-~~d~~~~~d~~---~~--g~i~~~~~G~~~~~i~v~G~~~Ha 251 (434)
T 3ife_A 181 LIHNPQIKHGKIRVAFTPDEEIG--RGPAHFDVE-AF-GASFAYMMDGG---PL--GGLEYESFNAAGAKLTFNGTNTHP 251 (434)
T ss_dssp HHTCTTSCBCCEEEEEESCGGGT--CTGGGCCHH-HH-CCSEEEECCCC---ST--TEEECCBCEEEEEEEEEECBCCCG
T ss_pred HHhCCCCCCCCEEEEEECCcccC--hHHHHhhhh-hc-CCCEEEEecCC---CC--CceeecCCCeEEEEEEEEEEecCC
Confidence 99988788999999999999998 488876432 33 46788888742 22 368899999999999999999998
Q ss_pred C-CCCCC-CHHHHHHHHHHHHHcchhhhHHHHHhcccccCCceeeeEeeeecCCCCCCCccccccCCeEEEEEEEecCCC
Q 018435 226 A-KLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPT 303 (356)
Q Consensus 226 ~-~p~~g-nai~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~i~~g~~~~~~~~~nvip~~~~~~~diR~~~~ 303 (356)
+ .|+.+ ||+..+++++..++.+..+ ..++.+++.+++| ..|+||++|++.+++|+.+.
T Consensus 252 g~~P~~g~nAi~~aa~~i~~l~~~~~~-------------~~~~~~~g~i~~g-------~~n~iP~~a~~~~diR~~~~ 311 (434)
T 3ife_A 252 GTAKNKMRNATKLAMEFNGHLPVEEAP-------------EYTEGYEGFYHLL-------SLNGDVEQSKAYYIIRDFDR 311 (434)
T ss_dssp GGCTTTCBCHHHHHHHHHHTSCTTCSG-------------GGCCTTCCEEEEE-------EEEECSSEEEEEEEEEESSH
T ss_pred CCCcccchhHHHHHHHHHHhcccccCC-------------CcceeeeEEEEee-------eEeEecCeEEEEEEEecCCH
Confidence 7 79888 9999999999888765221 1123334456655 78999999999999999999
Q ss_pred CCHHHHHHHHHHHhcc--CCCC---ceEEEEeeccc
Q 018435 304 TDAESLERRIVEEWAP--ASRN---MTFEVVINSLS 334 (356)
Q Consensus 304 ~~~~~~~~~i~~~~~~--~~~~---~~~~~~~~~~~ 334 (356)
++.+++.++|++++.. ...+ +++++.....+
T Consensus 312 ~~~~~i~~~i~~~~~~~~~~~g~~~~~v~~~~~~~~ 347 (434)
T 3ife_A 312 KNFEARKNTIENIVKQMQEKYGQDAVVLEMNDQYYN 347 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCGGGEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCceEEEEEeecccc
Confidence 9999999999877652 2233 66665543333
No 19
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=100.00 E-value=1.5e-38 Score=314.10 Aligned_cols=287 Identities=17% Similarity=0.191 Sum_probs=209.0
Q ss_pred CCCChhHHHHHHHhhhcccCCCCCc----------ChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEec-CCCCCCC
Q 018435 23 PAKSDDSIIERFRAYLQIDTSQPNP----------DYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWP-GSNPQLP 91 (356)
Q Consensus 23 ~~~~~~~~~~~l~~l~~i~s~s~~~----------~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~-g~~~~~~ 91 (356)
++...+++++++++|++|||+++.. ++.++++|+.++|+++|++++.+ +|+++.++ |+ +.|
T Consensus 29 i~~~~~~~~~~l~~lv~ips~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G~~~~~~------~~~~~~~~~g~--~~~ 100 (492)
T 3khx_A 29 VQQYEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDV------DHIAGRIEAGK--GND 100 (492)
T ss_dssp HHTTHHHHHHHHHHHHTSCCCCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEE------TTTEEEEEEEC--SSC
T ss_pred HHHhHHHHHHHHHHHhcCCCCCCCcccccccccchHHHHHHHHHHHHHHHcCCcceEe------CCEEEEEEeCC--CCC
Confidence 4456789999999999999985422 24699999999999999988764 23444443 43 348
Q ss_pred cEEEEeecccCCCCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccc
Q 018435 92 SILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHD 171 (356)
Q Consensus 92 ~il~~aH~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~ 171 (356)
+|+|+|||||||++ +.|+.+||++++ ++|++||||++|||++++++|+|++.|++.+..++++|.|+|+++||+|+ .
T Consensus 101 ~i~l~~H~D~vp~~-~~w~~~Pf~~~~-~~g~l~GrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-~ 177 (492)
T 3khx_A 101 VLGILCHVDVVPAG-DGWDSNPFEPVV-TEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEESDW-K 177 (492)
T ss_dssp EEEEEEECCCCCCC-SCCSSCTTSCEE-CSSEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEECCTTCCC-C
T ss_pred EEEEEEeccCCCCC-CCcccCCCceEE-ECCEEEecCCccCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccCCC-c
Confidence 99999999999996 489999999999 99999999999999999999999999999988889999999999999997 6
Q ss_pred cHHHHhccccccCCceEEEEecCcc----------------------------------------CcCCccee-------
Q 018435 172 GAEKFADSHVFNSLNVGIVLDEGLA----------------------------------------STTEDYRA------- 204 (356)
Q Consensus 172 G~~~~~~~~~~~~~~~~~~~~~g~~----------------------------------------~p~~~~~i------- 204 (356)
|+++++++.. ..+++++.|...+ .|.....+
T Consensus 178 g~~~~~~~~~--~~~~~~~~d~~~p~~~g~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~n~vpd~~~aiv~ept~~ 255 (492)
T 3khx_A 178 CTDRYFKTEE--MPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEARVLVKENM 255 (492)
T ss_dssp TTSHHHHHSC--CCSEEECSSCSSCSCCCBCEEEEEEEEECCCCCCCCCCSEEEEEEEECSCTTSCCCEEEEEEEECSCH
T ss_pred CHHHHHHhCc--CCCEEEecCCCccEEEecCcEEEEEEEEeccccccccccceeEEecccccCCcCCchHheEeecccch
Confidence 9999998642 2333333332110 01100001
Q ss_pred ------------EEeeeeeE-----EEEEEEEecCCccCCCCCC-CHHHHHHHHHHHHHcch--hhhHHHHHhcc-----
Q 018435 205 ------------FYAERCPW-----WLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFR--ASQFDLVKAGL----- 259 (356)
Q Consensus 205 ------------~~~~~G~~-----~~~v~~~G~~~Hs~~p~~g-nai~~~~~~~~~i~~~~--~~~~~~~~~~~----- 259 (356)
..+.+|.. +++|+++|+++|++.|+.| ||+..+++++.++.... ...++.+...+
T Consensus 256 ~~~~~~~~~~~~~~g~kG~~~~~~~~~~i~v~GkaaHas~P~~G~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 335 (492)
T 3khx_A 256 TDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLFNSDF 335 (492)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEETTEEEEEEECBCCCC------BCHHHHHHHHHTTSCBCHHHHHHHHHHHHHTTTCTT
T ss_pred HHHHHHHHHHHhhcCceeEEEecCCeEEEEEEeEEcccCCCccCccHHHHHHHHHHhcCCCchHHHHHHHHHHhhCCCCC
Confidence 12448888 9999999999999999999 99999999998775210 00011110000
Q ss_pred ---------cccCCceeeeEeeeecCCCCCCCccccccCCeEEEEEEEecCCCCCHHHHHHHHHHHhccCCCCceEEEEe
Q 018435 260 ---------KAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEVVI 330 (356)
Q Consensus 260 ---------~~~~~~~~v~~~~i~~g~~~~~~~~~nvip~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 330 (356)
....+.+++|++.+++| . |++|++.+|+|+++..+.+++.++|++.+. ..++++++..
T Consensus 336 ~~~l~i~~~d~~~G~~t~n~g~i~~g-------~----P~~a~~~idiR~~~~~~~~~v~~~i~~~~~--~~g~~~~i~~ 402 (492)
T 3khx_A 336 GEKMGMKFHTDVMGDVTTNIGVITYD-------N----ENAGLFGINLRYPEGFEFEKAMDRFANEIQ--QYGFEVKLGK 402 (492)
T ss_dssp SGGGTCC-------CCEEEEEEEEEE-------T----TTCCEEEEEEEECTTCCHHHHHHHHHHHHG--GGTEEEEEEE
T ss_pred ccccCCccccCCcCccEEeeeEEEEe-------c----CCEEEEEEEeeCCCCCCHHHHHHHHHHHHH--HcCCEEEEec
Confidence 00123467788777765 1 999999999999999999999999998775 3577887765
Q ss_pred ecccc
Q 018435 331 NSLSL 335 (356)
Q Consensus 331 ~~~~~ 335 (356)
...|+
T Consensus 403 ~~~p~ 407 (492)
T 3khx_A 403 VQPPH 407 (492)
T ss_dssp EECCB
T ss_pred cCCce
Confidence 54553
No 20
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=100.00 E-value=2e-36 Score=298.88 Aligned_cols=233 Identities=15% Similarity=0.205 Sum_probs=189.8
Q ss_pred ChhHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCC--CCCCcEEEEeecccCC
Q 018435 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSN--PQLPSILLNSHTDVVP 103 (356)
Q Consensus 26 ~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~--~~~~~il~~aH~Dtvp 103 (356)
..+++++++++|++|||. +++|.++++||.++|+++|++++. +..+|+++.++|+. ++.|+|+|+||||+||
T Consensus 9 ~~~~~~~~~~~l~~ips~--s~~e~~~~~~l~~~l~~~G~~~~~----~~~~nv~a~~~g~~g~~~~~~i~l~aH~D~vp 82 (487)
T 2qyv_A 9 QPKLLWQWFDQICAIPHP--SYKEEQLAQFIINWAKTKGFFAER----DEVGNVLIRKPATVGMENRKPVVLQAHLDMVP 82 (487)
T ss_dssp SSHHHHHHHHHHHHSCCB--TTCCHHHHHHHHHHHHHTTCEEEE----CTTCCEEEEECCCTTCTTBCCEEEEEESCBCC
T ss_pred CHHHHHHHHHHHHcCCCC--CCcHHHHHHHHHHHHHHcCCEEEE----cCCCcEEEEeCCCCCCCCCCeEEEEccCCccC
Confidence 468899999999999997 578999999999999999998775 45679999998742 3458999999999999
Q ss_pred CCCC----CCCCCCCCeeeCCCCeEEecCcc---cchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHHH
Q 018435 104 SEPS----KWSHHPFGAHLDSQGNIFARGSQ---DMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKF 176 (356)
Q Consensus 104 ~~~~----~w~~~P~~~~~~~~g~~~GrG~~---D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~ 176 (356)
.++. +|+.+||++.+ ++|++||||+. |||++++++|++++. .+ .++++|+|+|+++||.|+ .|++++
T Consensus 83 ~~~~~~~~~w~~~p~~~~~-~dg~l~g~G~~lgaD~k~g~a~~l~a~~~---~~-~~~~~v~~~~~~~EE~g~-~Ga~~~ 156 (487)
T 2qyv_A 83 QANEGTNHNFDQDPILPYI-DGDWVKAKGTTLGADNGIGMASALAVLES---ND-IAHPELEVLLTMTEERGM-EGAIGL 156 (487)
T ss_dssp C----------CCCCCEEE-CSSEEEETTBCCCHHHHHHHHHHHHHHHC---SS-SCCSSEEEEEESCTTTTC-HHHHTC
T ss_pred CCCCCCccccccCCeeEEe-eCCEEEeCCCCcCCcCHHHHHHHHHHHHh---CC-CCCCCEEEEEEeccccCC-HHHHHH
Confidence 9764 89999999999 89999999997 999999999998863 34 367899999999999985 699998
Q ss_pred hccccccCCceEEEEecCccCcCCcceeEEeeeee-----------------EEEEEEEEe-cCCccCCC-CC-C-CHHH
Q 018435 177 ADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCP-----------------WWLVIKARG-APGHGAKL-YD-N-SAME 235 (356)
Q Consensus 177 ~~~~~~~~~~~~~~~~~g~~~p~~~~~i~~~~~G~-----------------~~~~v~~~G-~~~Hs~~p-~~-g-nai~ 235 (356)
++++ +. .+.++++|.+. ...+.++.+|. .+++|+++| +++||+.| +. + ||+.
T Consensus 157 ~~~~-~~-~d~~~~~d~~~-----~~~i~~g~~g~~~~~~~~~~~~~~~~~g~~~~i~v~G~~~~Hsg~~~~~g~~nAi~ 229 (487)
T 2qyv_A 157 RPNW-LR-SEILINTDTEE-----NGEIYIGCAGGENADLELPIEYQVNNFEHCYQVVLKGLRGGHSGVDIHTGRANAIK 229 (487)
T ss_dssp CSSC-CC-CSEEEECCCCC-----TTEEEEEECEEEEEEEEEECCEEECCCSEEEEEEEECCCCCBTTTTTTSCCCCHHH
T ss_pred HHhc-cC-CCEEEEEccCC-----CCeEEEeccCCcceeeeccccccccCCCeEEEEEEEccCCccCCcccccCCCCHHH
Confidence 8754 43 67777766431 12455555544 779999999 89999987 44 3 9999
Q ss_pred HHHHHHHHHHcchhhhHHHHHhcccccCCceeeeEeeeecCCCCCCCccccccCCeEEEEEEE
Q 018435 236 NLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDI 298 (356)
Q Consensus 236 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~i~~g~~~~~~~~~nvip~~~~~~~di 298 (356)
.+++++..+..+. ...+++++.++||. +.|+||++|++.+++
T Consensus 230 ~~~~~i~~l~~~~---------------~~~~~~v~~i~gG~------~~NvIP~~a~~~~~~ 271 (487)
T 2qyv_A 230 VLLRFLAELQQNQ---------------PHFDFTLANIRGGS------IRNAIPRESVATLVF 271 (487)
T ss_dssp HHHHHHHHHHHHC---------------TTCCEEEEEEEEES------CTTBCCCCEEEEEEE
T ss_pred HHHHHHHHHhhcc---------------CCCcEEEEEEeCCC------cCcccCCceEEEEEe
Confidence 9999999887642 12578899999998 999999999999999
No 21
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=100.00 E-value=3e-36 Score=291.98 Aligned_cols=269 Identities=22% Similarity=0.235 Sum_probs=214.5
Q ss_pred hHHHHHHHhhhcccCCCCCc--------ChhHHHHHHHHHHHHCCCc-eEEEeecCCCceEEEEecCCCC-CCCcEEEEe
Q 018435 28 DSIIERFRAYLQIDTSQPNP--------DYTNASKFILAQAEALSLE-SQTLEFAKNKPLILLKWPGSNP-QLPSILLNS 97 (356)
Q Consensus 28 ~~~~~~l~~l~~i~s~s~~~--------~e~~~~~~l~~~l~~~g~~-~~~~~~~~~~~nv~~~~~g~~~-~~~~il~~a 97 (356)
++++++|++|++|||+|+.+ +|.++++||.++|+++|++ ++. +..+|+++.++|+++ ..|+|+|.|
T Consensus 2 ~~~~~~l~~Lv~i~s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G~~~~~~----~~~~nvia~~~g~~~~~~~~i~l~a 77 (417)
T 1fno_A 2 DKLLERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEMGLVNITL----SEKGTLMATLPANVEGDIPAIGFIS 77 (417)
T ss_dssp CSHHHHHHHHHTSCCBCCSSCSSSSSSHHHHHHHHHHHHHHHHHTCEEEEE----CTTCCEEEEECCSSCSCCCCEEEEE
T ss_pred hHHHHHHHHhEEecCCCCcccCCCCCCccHHHHHHHHHHHHHHcCCCeEEE----CCCceEEEEECCCCCCCCCceEEEE
Confidence 45889999999999986432 6889999999999999998 654 467899999987642 358999999
Q ss_pred ecccCCCCCCCCCCCCC-----Cee-e--------------------CCCCeEEecCc----ccchHHHHHHHHHHHHHH
Q 018435 98 HTDVVPSEPSKWSHHPF-----GAH-L--------------------DSQGNIFARGS----QDMKCVGMQYLEAIRRLK 147 (356)
Q Consensus 98 H~Dtvp~~~~~w~~~P~-----~~~-~--------------------~~~g~~~GrG~----~D~k~~~a~~l~a~~~l~ 147 (356)
||||||..+ .|..+|| .+. + ..|+++||||+ .|||++++++|++++.|+
T Consensus 78 H~D~Vp~~~-~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~grGat~l~~D~K~g~a~~l~a~~~l~ 156 (417)
T 1fno_A 78 HVDTSPDFS-GKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALAVLK 156 (417)
T ss_dssp ECCBCTTSC-CSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred eccccCCCC-CCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEEEcCCccccccccHHhHHHHHHHHHHHH
Confidence 999999874 6988885 442 1 03579999997 999999999999999999
Q ss_pred HcCCCCcccEEEEEeeccccCccccHHHHhccccccCCceEEEEecCccCcCCcceeEEeeeeeEEEEEEEEecCCccC-
Q 018435 148 ASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGA- 226 (356)
Q Consensus 148 ~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~~~~~g~~~p~~~~~i~~~~~G~~~~~v~~~G~~~Hs~- 226 (356)
+.+ .++++|+|+|+++||.| .|++++.+++ + ..+++++++.+ |.+ .++++.+|..+++|+++|+++|++
T Consensus 157 ~~~-~~~~~v~~~~~~~EE~g--~Ga~~~~~~~-~-~~d~~i~~d~~---~~g--~i~~~~~g~~~~~i~~~G~~~Hs~~ 226 (417)
T 1fno_A 157 GNP-IPHGDIKVAFTPDEEVG--KGAKHFDVEA-F-GAQWAYTVDGG---GVG--ELEFENFNAASVNIKIVGNNVHPGT 226 (417)
T ss_dssp SSS-CCCCCEEEEEESCGGGT--CTTTTCCHHH-H-CCSEEEECCCC---STT--BEECCBCEEEEEEEEEECBCCCGGG
T ss_pred hCC-CCCCcEEEEEEeccccC--CChhhhchhh-c-CCCEEEEeCCC---CcC--eeEEecCCceeEEEEEEeeccCCCC
Confidence 988 67899999999999987 4888776443 3 46778887653 333 578899999999999999999999
Q ss_pred CCCCC-CHHHHHHHHHHHHHcchhhhHHHHHhcccccCCceeeeEeeeecCCCCCCCccccccCCeEEEEEEEecCCCCC
Q 018435 227 KLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTD 305 (356)
Q Consensus 227 ~p~~g-nai~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~i~~g~~~~~~~~~nvip~~~~~~~diR~~~~~~ 305 (356)
.|+.+ ||+..+++++..+..+..+. .......+++++.+++| |++|++.+++|+.+.++
T Consensus 227 ~p~~g~nAi~~~a~~i~~l~~~~~~~--------~~~~~~~~~~v~~i~gG------------p~~a~~~~d~R~~~~~~ 286 (417)
T 1fno_A 227 AKGVMVNALSLAARIHAEVPADEAPE--------TTEGYEGFYHLASMKGT------------VDRAEMHYIIRDFDRKQ 286 (417)
T ss_dssp CTTTCBCHHHHHHHHHHTSCTTSSGG--------GCCTTCCEEEEEEEEEC------------SSEEEEEEEEEESSHHH
T ss_pred CccccCCHHHHHHHHHHhhhccCCcc--------cccccccEEEEEEEeec------------cCeEEEEEEEeCCCHHH
Confidence 68888 99999999998887654321 01122357788777764 89999999999999999
Q ss_pred HHHHHHHHHHHhcc--CCCC----ceEEEEee
Q 018435 306 AESLERRIVEEWAP--ASRN----MTFEVVIN 331 (356)
Q Consensus 306 ~~~~~~~i~~~~~~--~~~~----~~~~~~~~ 331 (356)
.+.+.++|++.+.. ...+ +++++...
T Consensus 287 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 318 (417)
T 1fno_A 287 FEARKRKMMEIAKKVGKGLHPDCYIELVIEDS 318 (417)
T ss_dssp HHHHHHHHHHHHHHHTTTCCTTCCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCceEEEEEecc
Confidence 99999999977652 2223 66665443
No 22
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=2.1e-35 Score=290.33 Aligned_cols=287 Identities=17% Similarity=0.237 Sum_probs=206.3
Q ss_pred CCChhHHHHHHHhhhcccCCCCCc----------ChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCCCCCCcE
Q 018435 24 AKSDDSIIERFRAYLQIDTSQPNP----------DYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSI 93 (356)
Q Consensus 24 ~~~~~~~~~~l~~l~~i~s~s~~~----------~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~~~~~~i 93 (356)
+...+++++++++|++|||++... ++.++++||.++|+++|++++.+ +..++++.+ |.+ .|+|
T Consensus 10 ~~~~~~~~~~l~~l~~ips~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G~~~~~~----~~~~~~~~~-g~~--~~~i 82 (470)
T 1lfw_A 10 EAKKDAILKDLEELIAIDSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGFDTENF----ANYAGRVNF-GAG--DKRL 82 (470)
T ss_dssp HTTHHHHHHHHHHHHTSCCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEE----TTTEEEEEE-CCC--SSEE
T ss_pred HHhHHHHHHHHHHHcCCCCcCCCccccccCCCcHHHHHHHHHHHHHHHHcCCeEEEe----cCeEEEEEe-CCC--CCeE
Confidence 356789999999999999985321 23789999999999999987652 346778877 643 4899
Q ss_pred EEEeecccCCCCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccH
Q 018435 94 LLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGA 173 (356)
Q Consensus 94 l~~aH~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~ 173 (356)
+|+|||||||+++ +|+++||++.++++|++||||+.|||++++++|+|++.|++.+..++++|+|+|+++||+|+ .|+
T Consensus 83 ~l~~H~D~vp~~~-~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l~~~~~~~~~~i~~i~~~~EE~g~-~G~ 160 (470)
T 1lfw_A 83 GIIGHMDVVPAGE-GWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEAGFKPKKKIDFVLGTNEETNW-VGI 160 (470)
T ss_dssp EEEEECCBCCCCS-CCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHHHHHTCCCSSEEEEEEESCTTTTC-HHH
T ss_pred EEEEeecccCCCC-CccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCcccCC-ccH
Confidence 9999999999975 89999999985348999999999999999999999999999888889999999999999986 699
Q ss_pred HHHhccccccC----CceE--EEEec-Ccc-------Cc--CCcc-----------e-------eEE-------------
Q 018435 174 EKFADSHVFNS----LNVG--IVLDE-GLA-------ST--TEDY-----------R-------AFY------------- 206 (356)
Q Consensus 174 ~~~~~~~~~~~----~~~~--~~~~~-g~~-------~p--~~~~-----------~-------i~~------------- 206 (356)
++++++..... .|.. +++.. +.. .+ .+.+ . +..
T Consensus 161 ~~~~~~~~~~~~~~~~D~~~~~~~ge~g~~~~~l~~~~~~~~g~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~~~ 240 (470)
T 1lfw_A 161 DYYLKHEPTPDIVFSPDAEYPIINGEQGIFTLEFSFKNDDTKGDYVLDKFKAGIATNVTPQVTRATISGPDLEAVKLAYE 240 (470)
T ss_dssp HHHHHHSCCCSEEEESSEESSEEEEECEEEEEEEEECCCCCCCSBEEEEEEECSBTTBCCSEEEEEEECSCHHHHHHHHH
T ss_pred HHHHHhCcCCcEEEEeCCCceEEEeccceEEEEEEEccCCcCCCcceeeeecCCcCCcccccceEEecccchHHHHHHHH
Confidence 99987643211 1110 11110 000 00 0000 0 111
Q ss_pred ------eeeeeE-----EEEEEEEecCCccCCCCCC-CHHHHHHHHHHHHHcch--hhhHHHHHhcc----c--------
Q 018435 207 ------AERCPW-----WLVIKARGAPGHGAKLYDN-SAMENLFKSIESVRRFR--ASQFDLVKAGL----K-------- 260 (356)
Q Consensus 207 ------~~~G~~-----~~~v~~~G~~~Hs~~p~~g-nai~~~~~~~~~i~~~~--~~~~~~~~~~~----~-------- 260 (356)
+.+|.. +++|+++|+++|++.|+.+ ||+.++++++..+.... ....+.+...+ .
T Consensus 241 ~~~~~~~~~G~~~~~~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 320 (470)
T 1lfw_A 241 SFLADKELDGSFEINDESADIVLIGQGAHASAPQVGKNSATFLALFLDQYAFAGRDKNFLHFLAEVEHEDFYGKKLGIFH 320 (470)
T ss_dssp HHHHHHTCEEEEEEETTEEEEEEECBCCBTTCGGGSBCHHHHHHHHHTTSCBCHHHHHHHHHHHHTTTTCTTSTTTTCCC
T ss_pred HHhhhhccccceeecCCcEEEEEeecccCCCCCccCccHHHHHHHHHHhCCCcchhHHHHHHHHHhcCCCCcccccCCcc
Confidence 245665 8999999999999999988 99999999987764110 00011111000 0
Q ss_pred --ccCCceeeeEeeeecCCCCCCCccccccCCe-EEEEEEEecCCCCCHHHHHHHHHHHhccCCCCceEEEEeeccc
Q 018435 261 --AEGEVVSVNMAFLKAGTPSPNGFVMNLQPSE-AEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEVVINSLS 334 (356)
Q Consensus 261 --~~~~~~~v~~~~i~~g~~~~~~~~~nvip~~-~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 334 (356)
.....++++++ .+|.+|++ |++.+++|+++.++.+.+.++|++.+. . ++++++....++
T Consensus 321 ~~~~~~~~t~~~g------------~i~~~p~~~a~~~~diR~~~~~~~~~i~~~i~~~~~-~--g~~v~~~~~~~~ 382 (470)
T 1lfw_A 321 HDDLMGDLASSPS------------MFDYEHAGKASLLNNVRYPQGTDPDTMIKQVLDKFS-G--ILDVTYNGFEEP 382 (470)
T ss_dssp EETTTEECEEEEE------------EEEEETTSCEEEEEEEEECTTCCHHHHHHHHHHHHT-T--TEEEECSCCBCC
T ss_pred cccccccceEEEE------------EEEEcCCceEEEEEEEecCCCCCHHHHHHHHHHHhc-C--CeEEEEEeCCCc
Confidence 00012344444 44557999 999999999999999999999998776 3 666655433333
No 23
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=100.00 E-value=1.3e-35 Score=292.81 Aligned_cols=267 Identities=13% Similarity=0.126 Sum_probs=211.6
Q ss_pred ChhHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCC--CCCCcEEEEeecccCC
Q 018435 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSN--PQLPSILLNSHTDVVP 103 (356)
Q Consensus 26 ~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~--~~~~~il~~aH~Dtvp 103 (356)
..+++++++++|++|||. +++|.++++||.++|+++|++++. +..+|+++.++|+. .+.|+|+|.||||+||
T Consensus 12 ~~~~~~~~~~~L~~ips~--s~~e~~~~~~l~~~l~~~G~~v~~----~~~~nv~a~~~g~~g~~~~~~v~l~aH~D~vp 85 (490)
T 3mru_A 12 SPAPLWQFFDKICSIPHP--SKHEEALAQYIVTWATEQGFDVRR----DPTGNVFIKKPATPGMENKKGVVLQAHIDMVP 85 (490)
T ss_dssp SSHHHHHHHHHHHHSCCB--TTCCTTHHHHHHHHHHHTTCEEEE----CTTCCEEEEECCCTTCTTCCCEEEEEECCBCC
T ss_pred CHHHHHHHHHHHhCCCCC--CCCHHHHHHHHHHHHHHcCCEEEE----cCCCeEEEEEcCCCCCCCCCeEEEEeccCCCC
Confidence 458899999999999996 678999999999999999998875 56789999998752 2468999999999999
Q ss_pred CCC----CCCCCCCCCeeeCCCCeEEecCcc---cchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHHH
Q 018435 104 SEP----SKWSHHPFGAHLDSQGNIFARGSQ---DMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKF 176 (356)
Q Consensus 104 ~~~----~~w~~~P~~~~~~~~g~~~GrG~~---D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~ 176 (356)
..+ .+|+.+||++.+ ++|++||||+. |||+++|++|++++ +. ..++++|.|+|+++||+|+ .|++.+
T Consensus 86 ~~~~~~~~~w~~~p~~~~~-~~g~l~g~G~~lgaD~k~g~a~~l~~l~---~~-~~~~~~v~~~~~~~EE~g~-~Ga~~~ 159 (490)
T 3mru_A 86 QKNEDTDHDFTQDPIQPYI-DGEWVTAKGTTLGADNGIGMASCLAVLA---SK-EIKHGPIEVLLTIDEEAGM-TGAFGL 159 (490)
T ss_dssp CBCTTSCCCTTTCCCCEEE-ETTEEEETTBCCCHHHHTTHHHHHHHHH---CS-SCCCCSEEEEEESCSSSTT-GGGGTC
T ss_pred CCCCCcccccccCCceEEe-eCCeEecCCCccCCCCHHHHHHHHHHHH---hC-CCCCCCEEEEEEccccccc-HhHHHh
Confidence 975 279999999999 99999999996 99999999998753 33 3468999999999999985 699988
Q ss_pred hccccccCCceEEEEecCccCc------CCc---c----eeEEeeeeeEEEEEEEEe-cCCccCC-CCCC--CHHHHHHH
Q 018435 177 ADSHVFNSLNVGIVLDEGLAST------TED---Y----RAFYAERCPWWLVIKARG-APGHGAK-LYDN--SAMENLFK 239 (356)
Q Consensus 177 ~~~~~~~~~~~~~~~~~g~~~p------~~~---~----~i~~~~~G~~~~~v~~~G-~~~Hs~~-p~~g--nai~~~~~ 239 (356)
++. .+ ..++++.+|.+.... .+. . ....+++|..+++|+++| +++||+. |+.| ||+..+++
T Consensus 160 ~~~-~~-~~~~~~~~d~~~~g~~~~g~~~g~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~gHs~~~p~~g~~nai~~~~~ 237 (490)
T 3mru_A 160 EAG-WL-KGDILLNTDSEQEGEVYMGCAGGIDGAMTFDITRDAIPAGFITRQLTLKGLKGGHSGCDIHTGRGNANKLIGR 237 (490)
T ss_dssp CSS-SC-CSSEEEECCCCCTTCCEEEECEEEEEEEEEECCEECCCTTEEEEEEEEECCCCEETTTSSSSCCCCHHHHHHH
T ss_pred hhc-cc-CCCEEEEcCCCCCCeEEEecCCccceEEEeeeeeeccCCCceEEEEEEECCCCcccccccccCCcCHHHHHHH
Confidence 875 23 357788887531100 000 0 012356789999999999 8999995 7766 99999999
Q ss_pred HHHHHHcchhhhHHHHHhcccccCCceeeeEeeeecCCCCCCCccccccCCeEEEEEEEecCCCCCHHHHHHHHHHHhc-
Q 018435 240 SIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWA- 318 (356)
Q Consensus 240 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~i~~g~~~~~~~~~nvip~~~~~~~diR~~~~~~~~~~~~~i~~~~~- 318 (356)
++..+.+. .+++++.++||+ +.|+||++|++.+++|..+.+..++..+++.+.+.
T Consensus 238 ~l~~l~~~------------------~~~~v~~i~gG~------~~NvIP~~a~~~~~iR~~~~~~~~~~~~~~~~~~~~ 293 (490)
T 3mru_A 238 FLAGHAQE------------------LDLRLVEFRGGS------LRNAIPREAFVTVALPAENQDKLAELFNYYTELLKT 293 (490)
T ss_dssp HHHHHTTT------------------TTCEEEEEEECS------CTTEECCCEEEEEEEEGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhc------------------CcEEEEEEECCC------CCcccCCccEEEEEECcccHHHHHHHHHHHHHHHHH
Confidence 99887541 367889999998 99999999999999998876666666666655443
Q ss_pred ---cCCCCceEEEEe
Q 018435 319 ---PASRNMTFEVVI 330 (356)
Q Consensus 319 ---~~~~~~~~~~~~ 330 (356)
....++++++..
T Consensus 294 ~~~~~~~~~~i~~~~ 308 (490)
T 3mru_A 294 ELGKIETDIVTFNEE 308 (490)
T ss_dssp HHTTTCCCCEEEEEE
T ss_pred HhhccCCCeEEEEEe
Confidence 234566666554
No 24
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=100.00 E-value=2.5e-36 Score=290.30 Aligned_cols=260 Identities=17% Similarity=0.173 Sum_probs=211.3
Q ss_pred CCChhHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCCCCCCcEEEEeecccCC
Q 018435 24 AKSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVP 103 (356)
Q Consensus 24 ~~~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~~~~~~il~~aH~Dtvp 103 (356)
+...+++++++++|+++||. +++|.++++||.++|+++|++++.. .....+|++++++|.++ +|+|+|+|||||||
T Consensus 12 ~~~~~~~~~~~~~l~~~pe~--s~~E~~~~~~i~~~l~~~G~~v~~~-~~g~~~~via~~~g~~~-g~~i~l~ah~D~vp 87 (394)
T 3ram_A 12 ETNKYSYIEISHRIHERPEL--GNEEIFASRTLIDRLKEHDFEIETE-IAGHATGFIATYDSGLD-GPAIGFLAEYDALP 87 (394)
T ss_dssp HHTHHHHHHHHHHHHHSCCC--TTCCHHHHHHHHHHHHHTTCEEEEE-ETTEEEEEEEEEECSSS-SCEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHHHHhCCCC--CcchHHHHHHHHHHHHHcCCeEEeC-CCCCceEEEEEEeCCCC-CCEEEEEEecccCC
Confidence 44568999999999999997 6799999999999999999988752 22225799999987654 48999999999998
Q ss_pred CCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHH-HHhccccc
Q 018435 104 SEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAE-KFADSHVF 182 (356)
Q Consensus 104 ~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~-~~~~~~~~ 182 (356)
. ++||||. |+ ..+++|.+++.|++.+..++++|.|+|+++||+|+..|++ .+++.+.+
T Consensus 88 g------------------~~ha~G~-d~--~~a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE~~~~~Ga~~~~~~~g~~ 146 (394)
T 3ram_A 88 G------------------LGHACGH-NI--IGTASVLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASYVKAGVI 146 (394)
T ss_dssp T------------------TSSTTCH-HH--HHHHHHHHHHHHHTTHHHHCSEEEEEECCCTTCCTTCCHHHHHHHHTGG
T ss_pred C------------------cceECCc-cH--HHHHHHHHHHHHHHhHhhCCceEEEEEECCccCCCCCchHHHHHHcCCc
Confidence 2 1355674 54 4577888999998776567899999999999987335999 89988777
Q ss_pred cCCceEEEEecCccCcCCcceeEEeeeeeEEEEEEEEecCCccC-CCCCC-CHHHHHHHHHHHHHcchhhhHHHHHhccc
Q 018435 183 NSLNVGIVLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGA-KLYDN-SAMENLFKSIESVRRFRASQFDLVKAGLK 260 (356)
Q Consensus 183 ~~~~~~~~~~~g~~~p~~~~~i~~~~~G~~~~~v~~~G~~~Hs~-~p~~g-nai~~~~~~~~~i~~~~~~~~~~~~~~~~ 260 (356)
+++|.+++++.. ....+..+.+|..+++|+++|+++|++ .|+.+ ||+.++++++..|+.++..
T Consensus 147 ~~~d~~~~~h~~-----~~~~~~~~~~g~~~~~i~v~Gk~~Ha~~~P~~g~nAi~~a~~~i~~l~~l~~~---------- 211 (394)
T 3ram_A 147 DQIDIALMIHPG-----NETYKTIDTLAVDVLDVKFYGKSAHASENADEALNALDAMISYFNGVAQLRQH---------- 211 (394)
T ss_dssp GGCSEEECCEEE-----SSBBCCCCBCEEEEEEEEEECBCCBHHHHGGGCBCHHHHHHHHHHHHHHHGGG----------
T ss_pred ccCCEEEEECCc-----cccCCCccccceeEEEEEEEccccccCCCCcCCCCHHHHHHHHHHHHHHHHhh----------
Confidence 777888877642 123455678999999999999999999 99999 9999999999999876532
Q ss_pred ccCCceeeeEeeeecCCCCCCCccccccCCeEEEEEEEecCCCCCHHHHHHHHHHHhcc--CCCCceEEEEe
Q 018435 261 AEGEVVSVNMAFLKAGTPSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP--ASRNMTFEVVI 330 (356)
Q Consensus 261 ~~~~~~~v~~~~i~~g~~~~~~~~~nvip~~~~~~~diR~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~ 330 (356)
....++++++.++||. +.|+||++|++.+++|+.+.++.+.+.++|++++.. ..+++++++..
T Consensus 212 -~~~~~~~~~~~i~gG~------~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~ei~~ 276 (394)
T 3ram_A 212 -IKKDQRVHGVILDGGK------AANIIPDYTHARFYTRAMTRKELDILTEKVNQIARGAAIQTGCDYEFGP 276 (394)
T ss_dssp -SCTTCEEEEEEEEBCS------CTTBCCSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred -CCCCCeeEEEEEECCC------CCceeCCeEEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEE
Confidence 1122567778889988 999999999999999999999999999999877652 34677887765
No 25
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=100.00 E-value=9e-36 Score=259.85 Aligned_cols=191 Identities=50% Similarity=0.921 Sum_probs=164.1
Q ss_pred ChhHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCCCCCCcEEEEeecccCCCC
Q 018435 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (356)
Q Consensus 26 ~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~~~~~~il~~aH~Dtvp~~ 105 (356)
+.++++++|++|++|||+++..++.++++|+.++|+++|++++..+...+.+|+++.++|++++.|+|+|+||+||||++
T Consensus 8 ~~~~~~~~l~~lv~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~g~~~~i~~~~g~~~~~~~ill~aH~DtVp~~ 87 (198)
T 1q7l_A 8 EEHPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVVTVLTWPGTNPTLSSILLNSHTDVVPVF 87 (198)
T ss_dssp CCCHHHHHHHHHHTSCCBTTSCCHHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEEECCSSTTSCEEEEEEECCBCCCC
T ss_pred hHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHHHCCCeEEEEEcCCCCeEEEEEEccCCCCCCeEEEEeeecccCCC
Confidence 45789999999999999865457899999999999999999887655457789999998876545899999999999997
Q ss_pred CCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHHHhccccccCC
Q 018435 106 PSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSL 185 (356)
Q Consensus 106 ~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~ 185 (356)
+++|+++||++.+.++|++||||+.|||++++++|+|++.|++.+..++++|+|+|+++||.|+..|+++++++..+...
T Consensus 88 ~~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~ 167 (198)
T 1q7l_A 88 KEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRFPRTIHMTFVPDEEVGGHQGMELFVQRPEFHAL 167 (198)
T ss_dssp GGGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCGGGTSTTTHHHHTTSHHHHTT
T ss_pred cccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcccccCccccHHHHHHhHHhccC
Confidence 67899999998763589999999999999999999999999999888899999999999999855799999987543334
Q ss_pred ceEEEEecCccCcCCcceeEEeeeeeEEEEE
Q 018435 186 NVGIVLDEGLASTTEDYRAFYAERCPWWLVI 216 (356)
Q Consensus 186 ~~~~~~~~g~~~p~~~~~i~~~~~G~~~~~v 216 (356)
+..+++|.+..+|++.+.++++++|..|++|
T Consensus 168 ~~~~~id~g~~ept~~~~v~~~~kG~~~~~v 198 (198)
T 1q7l_A 168 RAGFALDEGIANPTDAFTVFYSERSPWWVRV 198 (198)
T ss_dssp CEEEEEECCCCCSSSSEEEEECCSSCGGGCC
T ss_pred CcCEEEecCccCCCCCceEEEEccEEEEEEC
Confidence 5567888887789876789999999887653
No 26
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=100.00 E-value=3e-34 Score=277.12 Aligned_cols=261 Identities=15% Similarity=0.145 Sum_probs=209.5
Q ss_pred ChhHHHHHHHhhhcccCCC--------CCcChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCCCCCCcEEEEe
Q 018435 26 SDDSIIERFRAYLQIDTSQ--------PNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNS 97 (356)
Q Consensus 26 ~~~~~~~~l~~l~~i~s~s--------~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~~~~~~il~~a 97 (356)
+.++++++|++|++|++.+ .+++|.++++||.++|+++|++++. +..+|+++.++|++++.|+|+|.|
T Consensus 3 ~~~~~~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g~~~~~----d~~gnv~a~~~g~~~~~~~i~l~a 78 (408)
T 3n5f_A 3 QGERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYE----DAAGNLIGRKEGTNPDATVVLVGS 78 (408)
T ss_dssp CHHHHHHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHTCEEEE----CTTCCEEEEECCSSTTSCEEEEEE
T ss_pred CHHHHHHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEE----cCCCCEEEEecCCCCCCCEEEEEe
Confidence 3578999999999999953 2678999999999999999998875 556799999998765468999999
Q ss_pred ecccCCCCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccC----ccccH
Q 018435 98 HTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIG----GHDGA 173 (356)
Q Consensus 98 H~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g----~~~G~ 173 (356)
|||+||.+ |..|+|+|++++|.+++.|++++..++++|.|+|+++||.+ ++.|+
T Consensus 79 H~D~v~~~----------------------g~~d~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~~~~~~g~~Gs 136 (408)
T 3n5f_A 79 HLDSVYNG----------------------GCFDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGS 136 (408)
T ss_dssp ESCCCTTB----------------------CSSTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSSCTTTTCCCHHH
T ss_pred cCCCCCCC----------------------CccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCCcCH
Confidence 99999964 57799999999999999999998888999999999999973 34589
Q ss_pred HHHhcc------------cc---------------c-----c--CCceEEEEecCcc---Cc-CCcceeEEeeeeeEEEE
Q 018435 174 EKFADS------------HV---------------F-----N--SLNVGIVLDEGLA---ST-TEDYRAFYAERCPWWLV 215 (356)
Q Consensus 174 ~~~~~~------------~~---------------~-----~--~~~~~~~~~~g~~---~p-~~~~~i~~~~~G~~~~~ 215 (356)
+.++.. +. + + +.+..+.++.... ++ .....++.+++|..+++
T Consensus 137 ~~~~~~~~~~~~~~~~~~G~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~lhi~~g~~le~~~~~~gi~~~~~g~~~~~ 216 (408)
T 3n5f_A 137 RAMAGTLPPEALECRDAEGISLAEAMKQAGLDPDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIVTGIAGLIWVK 216 (408)
T ss_dssp HHHHTCCCGGGGSCBCTTCCBHHHHHHHTTCCGGGGGGGCCCTTTEEEEEEEEECSSSHHHHHTCSEEEEEEECEEEEEE
T ss_pred HHHHcCCCHHHhhccCCCCCCHHHHHHHhCCChhhhhhcccCccCccEEEEEeeccchhHHHcCCCeEEEEEeccceEEE
Confidence 888731 10 1 1 2343444443211 01 12457888999999999
Q ss_pred EEEEecCCcc-CCC-CCC-CHHHHHHHHHHHHHcchhhhHHHHHhcccccCCceeeeEeeeecC-CCCCCCccccccCCe
Q 018435 216 IKARGAPGHG-AKL-YDN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAG-TPSPNGFVMNLQPSE 291 (356)
Q Consensus 216 v~~~G~~~Hs-~~p-~~g-nai~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~i~~g-~~~~~~~~~nvip~~ 291 (356)
|+++|+++|+ +.| +.+ ||+..+++++..|+.+... .. .++++++.+++| . +.|+||++
T Consensus 217 i~v~G~~~Hags~P~~~g~nAi~~aa~~i~~l~~~~~~-----------~~-~~~~~vg~i~gG~~------~~NvIP~~ 278 (408)
T 3n5f_A 217 FTIEGKAEHAGATPMSLRRDPMAAAAQIIIVIEEEARR-----------TG-TTVGTVGQLHVYPG------GINVIPER 278 (408)
T ss_dssp EEEECCCEETTTSCTTTCCCHHHHHHHHHHHHHHHHHH-----------HS-SCEEEEEEEEEESC------CTTEECSE
T ss_pred EEEEEEcCcCCCCccccccCHHHHHHHHHHHHHHHHHh-----------cC-CcEEEEEEEEecCC------CCcCcCCe
Confidence 9999999999 579 477 9999999999999876421 11 478899999987 6 99999999
Q ss_pred EEEEEEEecCCCCCHHHHHHHHHHHhcc--CCCCceEEEEe
Q 018435 292 AEAGFDIRVPPTTDAESLERRIVEEWAP--ASRNMTFEVVI 330 (356)
Q Consensus 292 ~~~~~diR~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~ 330 (356)
|++.+++|+.+.++.+++.++|++.+.. ...++++++..
T Consensus 279 a~~~~diR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~~i~~ 319 (408)
T 3n5f_A 279 VEFVLDLRDLKAEVRDQVWKAIAVRAETIAKERNVRVTTER 319 (408)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred EEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEE
Confidence 9999999999999999999999877652 33566666654
No 27
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=100.00 E-value=1.7e-33 Score=276.80 Aligned_cols=263 Identities=14% Similarity=0.163 Sum_probs=207.8
Q ss_pred CCCCChhHHHHHHHhh-hcccCCC-----C----------CcChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecC
Q 018435 22 SPAKSDDSIIERFRAY-LQIDTSQ-----P----------NPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPG 85 (356)
Q Consensus 22 ~~~~~~~~~~~~l~~l-~~i~s~s-----~----------~~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g 85 (356)
.+....++++++|++| ++|||+| + +++|.++++||.++|+++|++++. +..+|++++++|
T Consensus 26 ~~~~~~~~~~~~l~~L~v~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G~~v~~----d~~gnvia~~~g 101 (474)
T 2v8h_A 26 PLSIASGRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGCKVKV----DKIGNMFAVYPG 101 (474)
T ss_dssp -CCCCTTHHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTTCEEEE----BTTCCEEEEECC
T ss_pred cccCCHHHHHHHHHHHhhhcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEE----ecCceEEEEECC
Confidence 3456778999999999 9999974 1 467899999999999999998774 456799999987
Q ss_pred CCCCCCcEEEEeecccCCCCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeecc
Q 018435 86 SNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDE 165 (356)
Q Consensus 86 ~~~~~~~il~~aH~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~E 165 (356)
++++ ++|+|+|||||||+++ .+|+|++++++|+|++.|++.+..++++|.|+|+++|
T Consensus 102 ~~~~-~~i~l~~H~DtVp~~g----------------------~~D~k~gvaa~L~a~~~L~~~~~~~~~~v~lif~~dE 158 (474)
T 2v8h_A 102 KNGG-KPTATGSHLDTQPEAG----------------------KYDGILGVLAGLEVLRTFKDNNYVPNYDVCVVVWFNA 158 (474)
T ss_dssp SSCC-SCEEEEECCCCCSSBC----------------------SSTTHHHHHHHHHHHHHHHHHTCCCSSCEEEEECTTC
T ss_pred CCCC-CeEEEEEecccCCCCC----------------------CcCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCc
Confidence 6543 6999999999999752 2499999999999999999998888999999999999
Q ss_pred ccC----ccccHHHHhcccc--------------------------c----------cCCceEEEEecCcc---C-cCCc
Q 018435 166 EIG----GHDGAEKFADSHV--------------------------F----------NSLNVGIVLDEGLA---S-TTED 201 (356)
Q Consensus 166 E~g----~~~G~~~~~~~~~--------------------------~----------~~~~~~~~~~~g~~---~-p~~~ 201 (356)
|++ ++.|++.+.+... + ...+..+.++.... . ....
T Consensus 159 E~~~~~~g~~Gs~~l~~~~~~~~~~~~~d~~~~dg~~~~e~l~~~G~~~~~~~~~~~e~~~~~~~lHi~~g~~l~~~g~~ 238 (474)
T 2v8h_A 159 EGARFARSCTGSSVWSHDLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDTPASYKENEIDAHFELHIEQGPILEDENKA 238 (474)
T ss_dssp SCSSSSCTTHHHHHHTTSSCHHHHHTCBCSSCSSCCBHHHHHHHHTCCCSBCSCTTTSCCSEEEEEEECCSSHHHHTTCS
T ss_pred cCCCCCCCcccHHHHHhccCHhhhhhhcccccccCccHHHHHHhcCCcccccccccccchhhheeeeeccCccccccCCc
Confidence 983 3458888865100 0 11233333332110 0 0123
Q ss_pred ceeEEeeeeeEEEEEEEEecCCccC-CCC-CC-CHHHHHHHHHHHHHcchhhhHHHHHhcccccCCceeeeEeeeecC-C
Q 018435 202 YRAFYAERCPWWLVIKARGAPGHGA-KLY-DN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAG-T 277 (356)
Q Consensus 202 ~~i~~~~~G~~~~~v~~~G~~~Hs~-~p~-~g-nai~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~i~~g-~ 277 (356)
..++.+.+|..+++|+++|+++||+ .|+ .+ ||+..+++++..+..+... . .++++++.+++| .
T Consensus 239 ~~i~~~~~G~~~~~i~v~G~~~Hsg~~P~~~g~nAi~~~a~~i~~l~~~~~~-----------~--~~t~~vg~i~gG~~ 305 (474)
T 2v8h_A 239 IGIVTGVQAYNWQKVTVHGVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQR-----------H--NGLFTCGIIDAKPY 305 (474)
T ss_dssp EEEEEEECEEEEEEEEEECCCEETTTCCGGGCCCHHHHHHHHHHHHHHHHHH-----------T--TCEEECCCEEEESC
T ss_pred ceeEEeecceEEEEEEEEeecCCCCCCCcccCCCHHHHHHHHHHHHHHHHhh-----------c--CCEEEEEEEEecCC
Confidence 5778899999999999999999999 586 67 9999999999998765331 1 368899999987 6
Q ss_pred CCCCCccccccCCeEEEEEEEecCCCCCHHHHHHHHHHHhcc--CC---CCceEEEEe
Q 018435 278 PSPNGFVMNLQPSEAEAGFDIRVPPTTDAESLERRIVEEWAP--AS---RNMTFEVVI 330 (356)
Q Consensus 278 ~~~~~~~~nvip~~~~~~~diR~~~~~~~~~~~~~i~~~~~~--~~---~~~~~~~~~ 330 (356)
+.|+||++|++.+++|+++.++.+++.++|++.+.. .. .++++++..
T Consensus 306 ------~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~~~~g~~~~~~~ 357 (474)
T 2v8h_A 306 ------SVNIIPGEVSFTLDFRHPSDDVLATMLKEAAAEFDRLIKINDGGALSYESET 357 (474)
T ss_dssp ------CTTEECSEEEEEEEEEESCHHHHHHHHHHHHHHHHHHTTCCTTCCCEEEEEE
T ss_pred ------CCceeCCEEEEEEEecCCChHHHHHHHHHHHHHHHHHHhhcccCCcEEEEEE
Confidence 999999999999999999999999999999977752 33 677776653
No 28
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=100.00 E-value=8.6e-34 Score=275.16 Aligned_cols=262 Identities=13% Similarity=0.152 Sum_probs=205.2
Q ss_pred ChhHHHHHHHhhhcccCCCC--------CcChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCCCCCCcEEEEe
Q 018435 26 SDDSIIERFRAYLQIDTSQP--------NPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNS 97 (356)
Q Consensus 26 ~~~~~~~~l~~l~~i~s~s~--------~~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~~~~~~il~~a 97 (356)
..++++++|++|++|||.++ +++|.++++||.++|+++|++++. +..+|++++++|++++.|+|+|+|
T Consensus 7 ~~~~~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G~~v~~----~~~gnv~a~~~g~~~~~~~i~l~~ 82 (423)
T 1z2l_A 7 FRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRF----DEVGNLYGRLNGTEYPQEVVLSGS 82 (423)
T ss_dssp HHHHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTTCEEEE----CTTSCEEEEECCSSEEEEEEEEEE
T ss_pred cHHHHHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcCCEEEE----ecCCcEEEEEcCCCCCCCEEEEEE
Confidence 35789999999999999863 257889999999999999998765 455699999987654348999999
Q ss_pred ecccCCCCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCc----cccH
Q 018435 98 HTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGG----HDGA 173 (356)
Q Consensus 98 H~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~----~~G~ 173 (356)
||||||.+ |..|+|++++++|++++.|++.+..++++|+|+|+++||+++ +.|+
T Consensus 83 H~D~Vp~~----------------------g~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~~~~~~g~~Gs 140 (423)
T 1z2l_A 83 HIDTVVNG----------------------GNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGS 140 (423)
T ss_dssp ECCCCTTB----------------------CSSTTHHHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSCCSSSCSCHHH
T ss_pred ecCCCCCC----------------------CccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCcccH
Confidence 99999964 456999999999999999999887889999999999999852 3488
Q ss_pred HHHhc----cccc-----------------------------cCCceEEEEecCcc---CcC-CcceeEEeeeeeEEEEE
Q 018435 174 EKFAD----SHVF-----------------------------NSLNVGIVLDEGLA---STT-EDYRAFYAERCPWWLVI 216 (356)
Q Consensus 174 ~~~~~----~~~~-----------------------------~~~~~~~~~~~g~~---~p~-~~~~i~~~~~G~~~~~v 216 (356)
+.+.. ++.+ ...+..+.++.... +|+ ....++.+.+|..+++|
T Consensus 141 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~G~~~~~~~p~~~~~~~~~~~~h~~~~~~~e~~~~~~~~~~~~~g~~~~~i 220 (423)
T 1z2l_A 141 KNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTV 220 (423)
T ss_dssp HHHTTCCCGGGTSSCCCSSSCCHHHHHHHTTCCCCSSCCCCCCCEEEEEEEEECCSSHHHHTTCCEEEEEEECEEEEEEE
T ss_pred HHHHcCCCHHHHhhhcCcCCcCHHHHHHHcCCccccccccCCCCceEEEEEEeccCchHHHCCCCeEEEeeEecceEEEE
Confidence 88876 2110 01233333332110 111 13577889999999999
Q ss_pred EEEecCCccC-CCC-CC-CHHHHHHHHHHHHHcchhhhHHHHHhcccccCCceeeeEeeeecC-CCCCCCccccccCCeE
Q 018435 217 KARGAPGHGA-KLY-DN-SAMENLFKSIESVRRFRASQFDLVKAGLKAEGEVVSVNMAFLKAG-TPSPNGFVMNLQPSEA 292 (356)
Q Consensus 217 ~~~G~~~Hs~-~p~-~g-nai~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~i~~g-~~~~~~~~~nvip~~~ 292 (356)
+++|+++|++ .|+ .+ ||+..+++++..++++... . ...++++++.+++| . +.|+||++|
T Consensus 221 ~v~G~~~Ha~~~P~~~g~nAi~~~a~~i~~l~~~~~~----~-------~~~~~~~vg~i~gg~~------~~NvIP~~a 283 (423)
T 1z2l_A 221 TLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKR----M-------GDPLVLTFGKVEPRPN------TVNVVPGKT 283 (423)
T ss_dssp EEECCCEETTTSCGGGCCCHHHHHHHHHHHHHHHHHH----H-------CTTCEEECCCEEEESC------CTTEECCEE
T ss_pred EEEeEcCCCCCCccccCcCHHHHHHHHHHHHHHHHHh----c-------CCCceEEEEEEeecCC------cceeECCEE
Confidence 9999999999 685 67 9999999999998765431 1 11468889999986 6 999999999
Q ss_pred EEEEEEecCCCCCHHHHHHHHHHHhcc--CCCCceEEEEe
Q 018435 293 EAGFDIRVPPTTDAESLERRIVEEWAP--ASRNMTFEVVI 330 (356)
Q Consensus 293 ~~~~diR~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~ 330 (356)
++.+|+|+.+.++.+++.++|++.+.. ...++++++..
T Consensus 284 ~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~g~~~~~~~ 323 (423)
T 1z2l_A 284 TFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDL 323 (423)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred EEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEE
Confidence 999999999999999999999877652 23566665543
No 29
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.96 E-value=3.5e-29 Score=228.28 Aligned_cols=178 Identities=21% Similarity=0.322 Sum_probs=144.5
Q ss_pred ChhHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCCCCCCcEEEEeecccCCCC
Q 018435 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (356)
Q Consensus 26 ~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~~~~~~il~~aH~Dtvp~~ 105 (356)
..+++++++++|++|||. ++++.++++||.++|+++|++++.++. ++.+|+++.+ |+ +.|+|+|+|||||||++
T Consensus 4 ~~~~~~~~l~~lv~ips~--s~~e~~~~~~l~~~l~~~G~~~~~~~~-~~~~nv~a~~-g~--~~~~i~l~~H~D~vp~~ 77 (268)
T 3t68_A 4 TDSPVLALAKELISRQSV--TPADAGCQDLMIERLKALGFEIESMVF-EDTTNFWARR-GT--QSPLFVFAGHTDVVPAG 77 (268)
T ss_dssp CCCHHHHHHHHHHTSCCB--TTCCTTHHHHHHHHHHHTTCEECCCEE-TTEEC-CEEE-CS--SSCEEEEEEECCBCCCC
T ss_pred cHHHHHHHHHHHhCCCCC--CCCchHHHHHHHHHHHHCCCeEEEEec-CCccEEEEEe-CC--CCCeEEEEccccccCCC
Confidence 357899999999999997 457788999999999999998775433 3578999998 64 35899999999999997
Q ss_pred C-CCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHHHhccc--cc
Q 018435 106 P-SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSH--VF 182 (356)
Q Consensus 106 ~-~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~--~~ 182 (356)
+ ++|+.+||++.+ ++|++||||+.|||+|++++|+|++.|++.+..++++|+|+|+++||.|+..|++++++.. ..
T Consensus 78 ~~~~w~~~pf~~~~-~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~ 156 (268)
T 3t68_A 78 PLSQWHTPPFEPTV-IDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSIGFLITSDEEGPFINGTVRVVETLMARN 156 (268)
T ss_dssp CGGGCSSCTTSCEE-ETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCTTSSSCCHHHHHHHHHHHTT
T ss_pred CcccCCCCCCccEE-ECCEEEecCcccchHHHHHHHHHHHHHHHhCCCCCCcEEEEEEeCCccCcccCHHHHHHHHHhcC
Confidence 6 789999999999 9999999999999999999999999999887778899999999999998645999888752 22
Q ss_pred cCCceEEEEecCccCcCCcceeEEeeeee
Q 018435 183 NSLNVGIVLDEGLASTTEDYRAFYAERCP 211 (356)
Q Consensus 183 ~~~~~~~~~~~g~~~p~~~~~i~~~~~G~ 211 (356)
...+++++++.+..... ...+..+.+|.
T Consensus 157 ~~~d~~i~~ept~~~~~-~~~i~~g~~G~ 184 (268)
T 3t68_A 157 ELIDMCIVGEPSSTLAV-GDVVKNGRRGG 184 (268)
T ss_dssp CCCCEEEECSCCBSSST-TSEEEECCGGG
T ss_pred CCCCEEEEeCCCCCccC-CceeEEecCCC
Confidence 34678888765432111 12355666665
No 30
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.96 E-value=6.6e-29 Score=226.56 Aligned_cols=177 Identities=20% Similarity=0.313 Sum_probs=144.6
Q ss_pred hhHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCCCCCCcEEEEeecccCCCCC
Q 018435 27 DDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEP 106 (356)
Q Consensus 27 ~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~~~~~~il~~aH~Dtvp~~~ 106 (356)
.+++++++++|++|||+ ++++.++++||.++|+++|++++.++. ++.+|+++.+ |. +.|+|+|+||+||||+++
T Consensus 5 ~~~~~~~l~~lv~ips~--s~~e~~~~~~l~~~l~~~G~~~~~~~~-~~~~nv~a~~-g~--~~~~i~l~~H~D~vp~~~ 78 (269)
T 4h2k_A 5 KEKVVSLAQDLIRRPSI--SPNDEGCQQIIAERLEKLGFQIEWMPF-NDTLNLWAKH-GT--SEPVIAFAGHTDVVPTGD 78 (269)
T ss_dssp HHHHHHHHHHHHTSCCB--TTCCTTHHHHHHHHHHTTTCEEEECCB-TTBCEEEEEE-CS--SSCEEEEEEECCBCCCCC
T ss_pred HHHHHHHHHHHhCCCCC--CCCcHHHHHHHHHHHHHcCCeEEEEEc-CCceEEEEEe-CC--CCCEEEEEeeecccCCCC
Confidence 46899999999999997 457788999999999999998876433 3678999998 64 358999999999999976
Q ss_pred -CCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHHHhccc--ccc
Q 018435 107 -SKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSH--VFN 183 (356)
Q Consensus 107 -~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~--~~~ 183 (356)
++|+.+||++.+ ++|++||||+.|||+|++++|+|++.|++.+..++++|+|+|+++||.|+..|++.+++.. ...
T Consensus 79 ~~~w~~~pf~~~~-~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~Ga~~~~~~~~~~~~ 157 (269)
T 4h2k_A 79 ENQWSSPPFSAEI-IDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDE 157 (269)
T ss_dssp GGGCSSCTTSCCE-ETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTC
T ss_pred cccccCCCCCeEE-ECCEEEeCCcccChHHHHHHHHHHHHHHHhCCCCCccEEEEEEeccccCcccCHHHHHHHHHhcCC
Confidence 789999999999 9999999999999999999999999999887778899999999999998645999888642 123
Q ss_pred CCceEEEEecCccCcCCcceeEEeeeee
Q 018435 184 SLNVGIVLDEGLASTTEDYRAFYAERCP 211 (356)
Q Consensus 184 ~~~~~~~~~~g~~~p~~~~~i~~~~~G~ 211 (356)
..+++++.+.......+ ..+..+.+|.
T Consensus 158 ~~d~~i~~Ept~~~~~~-~~i~~g~~G~ 184 (269)
T 4h2k_A 158 KITYCMVGEPSSAKNLG-DVVKNGRRGG 184 (269)
T ss_dssp CCCEEEECCCCBSSSTT-SEEECSCTTC
T ss_pred CCCEEEEECCCCCCcCC-ceeEEecccc
Confidence 46778887654321111 2455666655
No 31
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.86 E-value=2.2e-22 Score=189.49 Aligned_cols=166 Identities=14% Similarity=0.127 Sum_probs=127.3
Q ss_pred HHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCCCCCCcEEEEeecccCCCC-------
Q 018435 33 RFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSE------- 105 (356)
Q Consensus 33 ~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~~~~~~il~~aH~Dtvp~~------- 105 (356)
+|++|+++||+ ++.|.++++++.++|+++|++++. +..+|+++.++|++ +.|+|+|.||+|+|+..
T Consensus 3 ~l~~L~~~~s~--sg~e~~~~~~l~~~l~~~g~~~~~----d~~gnlia~~~g~~-~~~~v~l~aH~D~v~~~v~~i~~~ 75 (340)
T 2fvg_A 3 YLKELSMMPGV--SGDEGKVRDFIKSKIEGLVDNLYT----DVLGNLIALKRGRD-SSKKLLVSAHMDEVGFVVSKIEKD 75 (340)
T ss_dssp CHHHHHHSCCB--TTCCHHHHHHHHHHHGGGSSEEEE----CTTSCEEEEECCSE-EEEEEEEEEECCBCEEEEEEECTT
T ss_pred HHHHHHcCCCC--CCchHHHHHHHHHHHHhhCCEEEE----eCCCcEEEEecCCC-CCceEEEEeccCcCcEEEEEECCC
Confidence 58899999996 678899999999999999998775 56789999997753 24789999999999930
Q ss_pred -------CCCCCCCCCCee-----------------------------------------------eCCC----------
Q 018435 106 -------PSKWSHHPFGAH-----------------------------------------------LDSQ---------- 121 (356)
Q Consensus 106 -------~~~w~~~P~~~~-----------------------------------------------~~~~---------- 121 (356)
..+|..+||.+. +..+
T Consensus 76 G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~~l~id~g~~s~~e~~~~i~~gd~v~~~~~~~ 155 (340)
T 2fvg_A 76 GKVSFLPVGGVDPRILPGKVVQVKNLKGVIGYRPIHLQRDEENTPPRFENLRIDFGFSSADEAKKYVSIGDYVSFVSDYI 155 (340)
T ss_dssp SCEEEEEESCCCGGGCTTCEEEETTEEEEEEECC-----------CCSTTEEEECSCSSHHHHHTTCCTTCEEEECCCCE
T ss_pred CEEEEEeeCCcccccccCCEEEECcEEEEEcCCCccccchhhccCCCcccEEEEeCCCCHHHHHhhCCCCCEEEEccCce
Confidence 137999998763 3125
Q ss_pred ---CeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHHHhccccccCCceEEEEecCccCc
Q 018435 122 ---GNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLAST 198 (356)
Q Consensus 122 ---g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~~~~~g~~~p 198 (356)
+++||| +.|||++++++|++++.|+ .++++|+|+|+++||.|+ .|++++.+. . ..++++++|....
T Consensus 156 ~~~~~i~gr-a~D~k~g~a~~l~a~~~l~----~~~~~i~~~~~~~EE~G~-~G~~~~~~~--~-~~~~~i~~d~~~~-- 224 (340)
T 2fvg_A 156 EKNGRAVGK-AFDDRAGCSVLIDVLESGV----SPAYDTYFVFTVQEETGL-RGSAVVVEQ--L-KPTCAIVVETTTA-- 224 (340)
T ss_dssp EETTEEEES-CHHHHHHHHHHHHHHHTCC----CCSEEEEEEEECCCC------CHHHHHH--H-CCSEEEEEEEEEE--
T ss_pred eecCEEeec-cCccHHHHHHHHHHHHHhh----ccCCcEEEEEEcccccch-hhhHHHhhc--c-CCCEEEEEecccC--
Confidence 999999 9999999999999999886 367899999999999986 699988763 2 3467777764211
Q ss_pred CCcceeEEeeeeeEEEEEEEEecCCccCCCCCC-CH
Q 018435 199 TEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SA 233 (356)
Q Consensus 199 ~~~~~i~~~~~G~~~~~v~~~G~~~Hs~~p~~g-na 233 (356)
. .+.|++.|++.|..| |+
T Consensus 225 ----~-------------~~~G~~~h~~~~~~G~g~ 243 (340)
T 2fvg_A 225 ----G-------------DNPELEERKWATHLGDGP 243 (340)
T ss_dssp ----C-------------SCSTTCCSSSSCCTTSCC
T ss_pred ----C-------------CCCCCccccCCcccCCCc
Confidence 0 457888887777655 54
No 32
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.83 E-value=8.8e-21 Score=179.09 Aligned_cols=154 Identities=19% Similarity=0.264 Sum_probs=121.8
Q ss_pred ChhHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCCCCCCcEEEEeecccC---
Q 018435 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVV--- 102 (356)
Q Consensus 26 ~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~~~~~~il~~aH~Dtv--- 102 (356)
..++++++|++|++|||+ ++.|.++++++.++|+++|++++. +..+|+++.++|.+ +.|+|+|.||+|||
T Consensus 4 ~~~~~~~~l~~lv~i~s~--s~~e~~~~~~l~~~l~~~g~~~~~----d~~gnl~a~~~g~~-~~~~ill~~H~Dtv~~~ 76 (349)
T 2gre_A 4 HTKETMELIKELVSIPSP--SGNTAKIINFIENYVSEWNVETKR----NNKGALILTVKGKN-DAQHRLLTAHVDTLGAM 76 (349)
T ss_dssp HHHHHHHHHHHHHTSCCB--TTCCHHHHHHHHHHTTTSSSEEEE----CSSSCEEEEECCSE-EEEEEEEEEECCBCEEE
T ss_pred cHHHHHHHHHHHHhCCCC--CccHHHHHHHHHHHHHHhCCEEEE----ecCCcEEEEecCCC-CCceEEEEeccccccee
Confidence 357899999999999996 567889999999999999998775 46789999997753 24789999999999
Q ss_pred -------------CCCCCCCCCCCCCee------------------------------------------e---------
Q 018435 103 -------------PSEPSKWSHHPFGAH------------------------------------------L--------- 118 (356)
Q Consensus 103 -------------p~~~~~w~~~P~~~~------------------------------------------~--------- 118 (356)
|.+ +|..+||.+. +
T Consensus 77 v~~i~~~G~l~~~~~G--g~~~~~~~~~~v~i~~~~g~~~~g~i~~~~~~~h~~~~~~~~~~~~~~l~~~id~g~~~~~~ 154 (349)
T 2gre_A 77 VKEIKPDGRLSLSMIG--GFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADE 154 (349)
T ss_dssp EEEECTTSCEEEEEES--SCCGGGTTTCEEEEECTTSCEEEEEEECC-------------------CEEEESSCCCSHHH
T ss_pred EEEECCCCeEEEEecC--CCccccccCcEEEEEcCCCCEEEEEEeCCCCCccccchhccCCCCHHHceEEeccCCCCHHH
Confidence 433 4776665321 0
Q ss_pred --------------------CCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHHHhc
Q 018435 119 --------------------DSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFAD 178 (356)
Q Consensus 119 --------------------~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~ 178 (356)
..++++||| +.|||+|++++|++++.|++.+..++++|+++|+++||.|+ .|++++ .
T Consensus 155 ~~~~gi~~gd~v~~~~~~~~~~~~~i~gr-~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~G~-~g~~~~-~ 231 (349)
T 2gre_A 155 VRELGIEVGDFVSFDPRVQITESGYIKSR-HLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGY-GGNSNI-P 231 (349)
T ss_dssp HHHTTCCTTCEEEECCCCEECTTSEEEES-CCTTHHHHHHHHHHHHHHHHHTCCCSEEEEEEEESCC-----CCCCCC-C
T ss_pred HHHcCCCCCCEEEEccccEEccCCeEEEe-eccchHHHHHHHHHHHHHHhccCCCCceEEEEEECcccCCc-hhhccc-c
Confidence 035899999 69999999999999999998887788999999999999986 688765 1
Q ss_pred cccccCCceEEEEecCc
Q 018435 179 SHVFNSLNVGIVLDEGL 195 (356)
Q Consensus 179 ~~~~~~~~~~~~~~~g~ 195 (356)
...++++++|.+.
T Consensus 232 ----~~~~~~i~~D~~~ 244 (349)
T 2gre_A 232 ----EETVEYLAVDMGA 244 (349)
T ss_dssp ----TTEEEEEEECCCC
T ss_pred ----cCCCEEEEEeccc
Confidence 2357888888754
No 33
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.82 E-value=3.1e-20 Score=171.61 Aligned_cols=156 Identities=21% Similarity=0.243 Sum_probs=122.2
Q ss_pred CChhHHHHHHHhhhcccCCC-CCcChhHHHHHHHHHHHHCC--Cc-eEEEeec---CCCceEEEEecCCCCCCCcEEEEe
Q 018435 25 KSDDSIIERFRAYLQIDTSQ-PNPDYTNASKFILAQAEALS--LE-SQTLEFA---KNKPLILLKWPGSNPQLPSILLNS 97 (356)
Q Consensus 25 ~~~~~~~~~l~~l~~i~s~s-~~~~e~~~~~~l~~~l~~~g--~~-~~~~~~~---~~~~nv~~~~~g~~~~~~~il~~a 97 (356)
.+.++++++|++|++|++.. .++.+.++++||.++|+++| ++ ++..... .+.+||+++++|+++..++|++.|
T Consensus 17 ~~~~~~~~~l~~L~~i~sr~~~s~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~nvi~~~~g~~~~~~~v~l~a 96 (299)
T 1rtq_A 17 VDASQITGTISSLESFTNRFYTTTSGAQASDWIASEWQALSASLPNASVKQVSHSGYNQKSVVMTITGSEAPDEWIVIGG 96 (299)
T ss_dssp CCHHHHHHHHHHHHTSSCCCTTSHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEETTEEEEEEEEEECCSSEEEEEEEEEE
T ss_pred cCHHHHHHHHHHHhCcCCCCCCCchHHHHHHHHHHHHHHhcCCcccceeeeeccCCCCCceEEEEEECCCCCCCEEEEEe
Confidence 34689999999999999752 35678899999999999986 33 3321111 135899999988652347899999
Q ss_pred ecccCCCCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHHHh
Q 018435 98 HTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFA 177 (356)
Q Consensus 98 H~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~ 177 (356)
|+||||. .| .++.+||||+.|||+|++++|++++.|++.+..++++|+|+|+++||.|. .|+++++
T Consensus 97 H~D~v~~---~~----------~~~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~-~Gs~~~~ 162 (299)
T 1rtq_A 97 HLDSTIG---SH----------TNEQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYAAEEVGL-RGSQDLA 162 (299)
T ss_dssp ECCCCSS---TT----------CCTTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTS-HHHHHHH
T ss_pred ccccCCC---cC----------cCCCcccCCCcccHHHHHHHHHHHHHHHHcCCCCCceEEEEEECCccCCc-hhHHHHH
Confidence 9999983 35 34578999999999999999999999999887889999999999999985 6999998
Q ss_pred cccc--ccCCceEEEEecC
Q 018435 178 DSHV--FNSLNVGIVLDEG 194 (356)
Q Consensus 178 ~~~~--~~~~~~~~~~~~g 194 (356)
++.. ..+...++.+|..
T Consensus 163 ~~~~~~~~~~~~~i~~D~~ 181 (299)
T 1rtq_A 163 NQYKSEGKNVVSALQLDMT 181 (299)
T ss_dssp HHHHHTTCEEEEEEECSCC
T ss_pred HhhhhccccEEEEEEecCC
Confidence 7632 2234456666653
No 34
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.82 E-value=7e-20 Score=168.01 Aligned_cols=149 Identities=18% Similarity=0.294 Sum_probs=121.9
Q ss_pred CCChhHHHHHHHhhhcccCCCC------CcChhHHHHHHHHHHHHCCCceEEEeecC---CCceEEEEecCCCCCCCcEE
Q 018435 24 AKSDDSIIERFRAYLQIDTSQP------NPDYTNASKFILAQAEALSLESQTLEFAK---NKPLILLKWPGSNPQLPSIL 94 (356)
Q Consensus 24 ~~~~~~~~~~l~~l~~i~s~s~------~~~e~~~~~~l~~~l~~~g~~~~~~~~~~---~~~nv~~~~~g~~~~~~~il 94 (356)
....++++++|++|++|+|.++ +.++.++++||.++|+++|++++...... ..+||++.++|+++ .++|+
T Consensus 3 ~i~~~~~~~~l~~L~~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~nvi~~~~g~~~-~~~i~ 81 (284)
T 1tkj_A 3 DIPLANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAGYTTTLQQFTSGGATGYNLIANWPGGDP-NKVLM 81 (284)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHTCEEEEEEEEETTEEEEEEEEECSCSEE-EEEEE
T ss_pred cCCHHHHHHHHHHHHcccccCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEEeccCCCCceeEEEEEeCCCC-CCEEE
Confidence 3457899999999999999753 12678999999999999999887654421 25699999987643 37899
Q ss_pred EEeecccCCCCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHH
Q 018435 95 LNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAE 174 (356)
Q Consensus 95 ~~aH~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~ 174 (356)
+.||+|+||.+ ||+.|||+|++++|++++.|++.+..++++|+|+|+++||.|. .|++
T Consensus 82 l~aH~D~v~~g---------------------~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~-~Gs~ 139 (284)
T 1tkj_A 82 AGAHLDSVSSG---------------------AGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELGL-IGSK 139 (284)
T ss_dssp EEEECCCCTTS---------------------CCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTS-HHHH
T ss_pred EEeecCCCCCC---------------------CCCccChHHHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCC-cCHH
Confidence 99999999864 4899999999999999999999887889999999999999985 6999
Q ss_pred HHhcccc---ccCCceEEEEecCc
Q 018435 175 KFADSHV---FNSLNVGIVLDEGL 195 (356)
Q Consensus 175 ~~~~~~~---~~~~~~~~~~~~g~ 195 (356)
+++++.. ..++..++++|..+
T Consensus 140 ~~~~~~~~~~~~~~~~~i~~D~~g 163 (284)
T 1tkj_A 140 FYVNNLPSADRSKLAGYLNFDMIG 163 (284)
T ss_dssp HHHHHSCHHHHTTEEEEEEECCCC
T ss_pred HHHhhCccchhhcEEEEEEecCCC
Confidence 9987632 13456677787543
No 35
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.80 E-value=2.3e-19 Score=168.24 Aligned_cols=144 Identities=18% Similarity=0.226 Sum_probs=118.6
Q ss_pred HHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCCCCCCcEEEEeecccCC------
Q 018435 30 IIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVP------ 103 (356)
Q Consensus 30 ~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~~~~~~il~~aH~Dtvp------ 103 (356)
++++|++|+++||+ ++.|.++++++.++|+++|+ ++. ++.+|+++.++| + .|+|+|.||+|+|+
T Consensus 4 ~~~~l~~l~~~~s~--sg~e~~~~~~l~~~l~~~g~-~~~----d~~gnlia~~~~-~--~~~i~l~aH~D~v~~~v~~i 73 (332)
T 2wyr_A 4 MIEKLKKFTQIPGI--SGYEERIREEIIREIKDFAD-YKV----DAIGNLIVELGE-G--EERILFMAHMDEIGLLITGI 73 (332)
T ss_dssp HHHHHHHHHTSCCB--TTCCHHHHHHHHHHHTTTCC-CEE----CTTCCEEEEEES-S--SEEEEEEEECCBCEEEEEEE
T ss_pred HHHHHHHHHcCCCC--CCcHHHHHHHHHHHHhhcCc-EEE----cCCCeEEEEecC-C--CceEEEEeccCcccEEEEEE
Confidence 68999999999996 57889999999999999999 654 678999999876 2 47999999999995
Q ss_pred ----------CCCCCCCC--------------------------------------------------------------
Q 018435 104 ----------SEPSKWSH-------------------------------------------------------------- 111 (356)
Q Consensus 104 ----------~~~~~w~~-------------------------------------------------------------- 111 (356)
.+ +|..
T Consensus 74 ~~~G~l~~~~~G--g~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~~id~g~~~~~~~~~~i~~Gd 151 (332)
T 2wyr_A 74 TDEGKLRFRKVG--GIDDRLLYGRHVNVVTEKGILDGVIGATPPHLSLERDKSVIPWYDLVIDIGAESKEEALELVKPLD 151 (332)
T ss_dssp CTTSCEEEEEES--CCCGGGTTTEEEEEECSSCEEEEEECCCCTTC-----CCCCCGGGCCBBCSCSSHHHHHHHCCTTC
T ss_pred CCCCeEEEEecC--CcChhhccCCEEEEEcCCCCEEEEEcCCCcccChhhhccCCChHHEEEEeCCCCHHHHHhhCCCCC
Confidence 43 2432
Q ss_pred -----CCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHHHhccccccCCc
Q 018435 112 -----HPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLN 186 (356)
Q Consensus 112 -----~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~ 186 (356)
+||.. . .++++||| +.|||+|++++|++++.|++.+ ++++|.|+|+++||.|+ .|++++.+. + ..+
T Consensus 152 ~~~~~~~~~~-~-~~~~i~gr-a~D~k~g~a~~l~a~~~l~~~~--~~~~i~~~~~~~EE~G~-~G~~~~~~~--~-~~~ 222 (332)
T 2wyr_A 152 FAVFKKHFSV-L-NGKYVSTR-GLDDRFGVVALIEAIKDLVDHE--LEGKVIFAFTVQEEVGL-KGAKFLANH--Y-YPQ 222 (332)
T ss_dssp EEEECCCCEE-E-TTTEEECT-THHHHHHHHHHHHHHHTTTTSC--CSSEEEEEEESCGGGTS-HHHHHHTTT--C-CCS
T ss_pred EEEEccccEE-e-cCCeEEcc-cCCcHHHHHHHHHHHHHHhhcC--CCceEEEEEECccccCc-chHHHHhcc--c-CCC
Confidence 13332 3 68999999 9999999999999999998765 56899999999999996 699988752 2 357
Q ss_pred eEEEEecC
Q 018435 187 VGIVLDEG 194 (356)
Q Consensus 187 ~~~~~~~g 194 (356)
+++++|..
T Consensus 223 ~~i~~d~~ 230 (332)
T 2wyr_A 223 YAFAIDSF 230 (332)
T ss_dssp EEEEECCE
T ss_pred EEEEEecc
Confidence 88888764
No 36
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.80 E-value=3.3e-19 Score=169.80 Aligned_cols=153 Identities=17% Similarity=0.184 Sum_probs=120.6
Q ss_pred hhHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCCCCCCcEEEEeecccCCC--
Q 018435 27 DDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPS-- 104 (356)
Q Consensus 27 ~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~~~~~~il~~aH~Dtvp~-- 104 (356)
.++++++|++|+++||+ ++.|.+++++|.++|+++|++++. +..+|+++.++|+. +.|+|+|.||+|+|+.
T Consensus 6 ~~~~~~~l~~L~~~~s~--sg~e~~~~~~l~~~l~~~g~~~~~----d~~gnlia~~~g~~-~~~~vll~aH~D~v~~~v 78 (373)
T 1vhe_A 6 LDETLTMLKDLTDAKGI--PGNEREVRQVMKSYIEPFADEVTT----DRLGSLIAKKTGAE-NGPKIMIAGHLDEVGFMV 78 (373)
T ss_dssp CCHHHHHHHHHHHSCCC--TTCCHHHHHHHHHHHGGGCSEEEE----CTTCCEEEEEESST-TSCEEEEEEECCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCC--CCchHHHHHHHHHHHHhhCCEEEE----cCCCcEEEEecCCC-CCceEEEEecCCcCCEEE
Confidence 35799999999999996 678899999999999999998765 57789999988763 3489999999999982
Q ss_pred --------------C----------------CC-------CCCCCC----------------------------------
Q 018435 105 --------------E----------------PS-------KWSHHP---------------------------------- 113 (356)
Q Consensus 105 --------------~----------------~~-------~w~~~P---------------------------------- 113 (356)
+ .+ .|..+.
T Consensus 79 ~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~s~~~~~~~gi~ 158 (373)
T 1vhe_A 79 TQITDKGFIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEALEWGVL 158 (373)
T ss_dssp EEECTTSCEEEEEESCCCGGGTTTCEEEEEETTEEEEEEEECCCGGGSCTTTTTSCCCGGGCEEECSCSSHHHHHHTTCC
T ss_pred EEECCCCeEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEcCCCcccCchhhccCCCChhHeEEEecCCCHHHHHHcCCC
Confidence 1 11 143111
Q ss_pred ----------CCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHHHhcccccc
Q 018435 114 ----------FGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFN 183 (356)
Q Consensus 114 ----------~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~ 183 (356)
|+... +++++||| +.|||+|++++|++++.|++.+ ++++|+|+|+++||.|+ .|++++... +
T Consensus 159 ~Gd~v~~~~~~~~~~-~~~~i~gr-~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~G~-~G~~~~~~~--~- 230 (373)
T 1vhe_A 159 PGDMIVPHFEFTVMN-NEKFLLAK-AWDNRIGCAIAIDVLRNLQNTD--HPNIVYGVGTVQEEVGL-RGAKTAAHT--I- 230 (373)
T ss_dssp TTCEEEECCCCEECS-STTEEEET-THHHHHHHHHHHHHHHHHHTSC--CSSEEEEEEESCCTTTS-HHHHHHHHH--H-
T ss_pred CCCEEEEccccEEec-CCCeEEec-cCccHHHHHHHHHHHHHHhhcC--CCceEEEEEECCcccCh-hhHHHHhcc--c-
Confidence 11111 27899999 6899999999999999998765 56899999999999996 699887542 2
Q ss_pred CCceEEEEecC
Q 018435 184 SLNVGIVLDEG 194 (356)
Q Consensus 184 ~~~~~~~~~~g 194 (356)
..++++++|.+
T Consensus 231 ~~d~~i~~d~~ 241 (373)
T 1vhe_A 231 QPDIAFGVDVG 241 (373)
T ss_dssp CCSEEEEEEEE
T ss_pred CCCEEEEEecc
Confidence 35778888754
No 37
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.78 E-value=3e-18 Score=158.59 Aligned_cols=159 Identities=17% Similarity=0.180 Sum_probs=127.7
Q ss_pred CCChhHHHHHHHhhhcccCC-CCCcChhHHHHHHHHHHHHCCCceEEEeec----CC----CceEEEEecCCCCCCCcEE
Q 018435 24 AKSDDSIIERFRAYLQIDTS-QPNPDYTNASKFILAQAEALSLESQTLEFA----KN----KPLILLKWPGSNPQLPSIL 94 (356)
Q Consensus 24 ~~~~~~~~~~l~~l~~i~s~-s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~----~~----~~nv~~~~~g~~~~~~~il 94 (356)
....+++++.|++|+++.+. ..+.++.++++||.++|+++|++++..... .+ ..||+++++|+. .+.|+
T Consensus 21 ~~~~~~~~~~l~~l~~~~~R~~~s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~--~~~il 98 (309)
T 3tc8_A 21 DFNADSAYAYVANQVAFGPRVPNTAAHKACGDYLASELKRFGAKVYQQEAILTAYDGTKLEARNIIGSFDPEN--SKRVL 98 (309)
T ss_dssp CCCHHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTC--SSEEE
T ss_pred ccCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEeeccccCCCcccceEEEEEECCCC--CceEE
Confidence 45678999999999988764 235678999999999999999988764432 12 479999999863 47999
Q ss_pred EEeecccCCCCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCc-----
Q 018435 95 LNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGG----- 169 (356)
Q Consensus 95 ~~aH~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~----- 169 (356)
+.||+|+|+.++ .+||. + +++.+| +|+.||++|+|++|++++.|++.+ ++++|.|+|+.+||.|.
T Consensus 99 l~aH~Dsv~~~~----~~p~~--~-~~~~~~-~Ga~D~~sGva~~Le~ar~l~~~~--~~~~i~f~~~~~EE~Gl~~~~~ 168 (309)
T 3tc8_A 99 LFAHWDSRPYSD----HDPDP--S-KHRTPL-DGADDGGSGVGALLEIARQIGQKA--PGIGIDIIFFDAEDYGTPEFVT 168 (309)
T ss_dssp EEEECCCCSCCT----TCSSG--G-GTTSCC-CCTTTTHHHHHHHHHHHHHHHHSC--CSSEEEEEEECSCSCSCCTTCC
T ss_pred EEecccCCCCCC----CCccc--c-CCCccc-cCcccchHhHHHHHHHHHHHHhCC--CCCcEEEEEECccccccccccc
Confidence 999999999763 35775 3 677788 999999999999999999999875 68999999999999984
Q ss_pred -------cccHHHHhccccc--cCCceEEEEecC
Q 018435 170 -------HDGAEKFADSHVF--NSLNVGIVLDEG 194 (356)
Q Consensus 170 -------~~G~~~~~~~~~~--~~~~~~~~~~~g 194 (356)
+.|++++.++... ..+...+.+|..
T Consensus 169 ~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlD~~ 202 (309)
T 3tc8_A 169 DYTPDSWCLGTQFWAKNPHVPNYTAEYGILLDMV 202 (309)
T ss_dssp SCCTTCSCHHHHHHHHSCSSTTCCCSEEEEEESC
T ss_pred cccccccchhHHHHHhCCCccccceEEEEEeccc
Confidence 1699999986433 235567777753
No 38
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.78 E-value=4.6e-18 Score=157.45 Aligned_cols=160 Identities=18% Similarity=0.175 Sum_probs=112.9
Q ss_pred CCCChhHHHHHHHhhhcccCCC-CCcChhHHHHHHHHHHHHCCCceEEEeec----CC----CceEEEEecCCCCCCCcE
Q 018435 23 PAKSDDSIIERFRAYLQIDTSQ-PNPDYTNASKFILAQAEALSLESQTLEFA----KN----KPLILLKWPGSNPQLPSI 93 (356)
Q Consensus 23 ~~~~~~~~~~~l~~l~~i~s~s-~~~~e~~~~~~l~~~l~~~g~~~~~~~~~----~~----~~nv~~~~~g~~~~~~~i 93 (356)
.....+++++.|++|++|++.. .+.++.++++||.++|+++|++++..... .+ ..||+++++|+. .+.|
T Consensus 22 ~~~~~~~~~~~l~~L~~~~~R~~gs~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~--~~~i 99 (314)
T 3gux_A 22 PEFDADSAYQYIQVQADFGPRVPNTQAHKECGEYLAGQLEKFGAKVYNQYADLIAYDGTILKSRNIIGAYKPES--KKRI 99 (314)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTC--SSEE
T ss_pred CCCCHHHHHHHHHHHHccCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeeccccCCCcccceEEEEEECCCC--CceE
Confidence 3456799999999999998753 35678999999999999999988764432 12 479999999863 4799
Q ss_pred EEEeecccCCCCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCc----
Q 018435 94 LLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGG---- 169 (356)
Q Consensus 94 l~~aH~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~---- 169 (356)
++.||+|+|+.++ .+|+. . .++. .++|+.||++|++++|++++.|++.+ ++++|.|+++.+||.|.
T Consensus 100 ll~aH~Dsv~~~~----~~p~~--~-~~~~-~~~GA~D~~sGva~~Le~ar~l~~~~--~~~~i~fv~~~~EE~Gl~~~~ 169 (314)
T 3gux_A 100 LLCAHWDSRPYAD----NDPDP--K-NHHT-PILGVNDGASGVGVLLEIARQIQKEQ--PALGIDIVFFDSEDYGIPEFY 169 (314)
T ss_dssp EEEEECCCCC----------------------------CHHHHHHHHHHHHHHHHSC--CSSEEEEEEECSCCC------
T ss_pred EEEccccCCCcCC----CCccc--c-cCCc-ccCCCcccHHHHHHHHHHHHHHHhCC--CCCcEEEEEECCccccccccc
Confidence 9999999999763 24553 2 3344 56999999999999999999999875 68999999999999984
Q ss_pred ---------cccHHHHhccccc--cCCceEEEEecC
Q 018435 170 ---------HDGAEKFADSHVF--NSLNVGIVLDEG 194 (356)
Q Consensus 170 ---------~~G~~~~~~~~~~--~~~~~~~~~~~g 194 (356)
..|++++.++... ..+...+.+|..
T Consensus 170 ~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlDm~ 205 (314)
T 3gux_A 170 DGKYKQDTWCLGSQYWARTPHVQNYNARYGILLDMV 205 (314)
T ss_dssp -----CTTSCHHHHHHHHSCSSTTCCCSEEEEEESC
T ss_pred cccccccccchhHHHHHhCCcccccceeEEEEEecc
Confidence 1699999986433 345567777753
No 39
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.73 E-value=1e-17 Score=158.25 Aligned_cols=144 Identities=16% Similarity=0.179 Sum_probs=115.2
Q ss_pred HHHHHHhhhcccCCCCCcCh-hHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCCCCCCcEEEEeecccCC-----
Q 018435 30 IIERFRAYLQIDTSQPNPDY-TNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVP----- 103 (356)
Q Consensus 30 ~~~~l~~l~~i~s~s~~~~e-~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~~~~~~il~~aH~Dtvp----- 103 (356)
++++|++|+++||+ ++.| .++++++.++|+++|++++. +..+|+++.++|+ .|+|+|.||+|+|+
T Consensus 8 ~~~~l~~L~~~~s~--sg~e~~~~~~~l~~~l~~~g~~~~~----d~~gnlia~~~g~---~~~i~l~aH~D~v~~~v~~ 78 (353)
T 1y0y_A 8 DYELLKKVVEAPGV--SGYEFLGIRDVVIEEIKDYVDEVKV----DKLGNVIAHKKGE---GPKVMIAAHMDQIGLMVTH 78 (353)
T ss_dssp CHHHHHHHHHSCCB--TTCGGGTHHHHHHHHHGGGSSEEEE----CTTCCEEEEECCS---SCEEEEEEECCBCEEEEEE
T ss_pred HHHHHHHHHhCCCC--CccchHHHHHHHHHHHHhhCCeEEE----cCCCCEEEEecCC---CccEEEEeccCcccEEEEE
Confidence 67899999999996 6788 89999999999999998775 6788999998765 38999999999995
Q ss_pred -----------CCCCCCCCCCCCe--------------------------------------------------------
Q 018435 104 -----------SEPSKWSHHPFGA-------------------------------------------------------- 116 (356)
Q Consensus 104 -----------~~~~~w~~~P~~~-------------------------------------------------------- 116 (356)
.+ +|...+|.+
T Consensus 79 i~~~G~l~~~~~G--g~~~~~~~~~~v~v~~~~g~~~~g~i~~~~~h~~~~~~~~~~~~~~~l~~d~g~~~~~~~~~~gi 156 (353)
T 1y0y_A 79 IEKNGFLRVAPIG--GVDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPEDRKKAPDWDQIFIDIGAESKEEAEDMGV 156 (353)
T ss_dssp ECTTSCEEEEEES--SCCGGGTTTCEEEEEEETTEEEEEEEEC-------------CCCGGGCEEECSCSSHHHHHHTTC
T ss_pred ECCCceEEEEEeC--CcchhhccCCEEEEEeCCCcEEEEEEeCCCcccCchhhccCCCChHHeEEEeCCCCHHHHHHcCC
Confidence 33 343222110
Q ss_pred -------------eeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHHHhcccccc
Q 018435 117 -------------HLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFN 183 (356)
Q Consensus 117 -------------~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~ 183 (356)
.. .++++||| +.|||+|++++|++++.|++ ++++|+++|+++||.|+ .|++++... +
T Consensus 157 ~~Gd~v~~~~~~~~~-~~~~i~gr-a~D~k~g~a~~l~a~~~l~~----~~~~i~~~~~~~EE~g~-~G~~~~~~~--~- 226 (353)
T 1y0y_A 157 KIGTVITWDGRLERL-GKHRFVSI-AFDDRIAVYTILEVAKQLKD----AKADVYFVATVQEEVGL-RGARTSAFG--I- 226 (353)
T ss_dssp CTTCEEEECCCCEEE-TTTEEEET-THHHHHHHHHHHHHHHHCCS----CSSEEEEEEESCCTTTS-HHHHHHHHH--H-
T ss_pred CCCCEEEeccCcEEe-cCCeEEec-cCccHHHHHHHHHHHHHhhc----CCCeEEEEEECCcccch-hHHHHHhhc--c-
Confidence 11 25789999 89999999999999998865 57899999999999986 699888642 2
Q ss_pred CCceEEEEecC
Q 018435 184 SLNVGIVLDEG 194 (356)
Q Consensus 184 ~~~~~~~~~~g 194 (356)
..++++++|..
T Consensus 227 ~~~~~i~~d~~ 237 (353)
T 1y0y_A 227 EPDYGFAIDVT 237 (353)
T ss_dssp CCSEEEEEEEE
T ss_pred CCCEEEEEecc
Confidence 35678888754
No 40
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.72 E-value=4e-17 Score=152.64 Aligned_cols=136 Identities=18% Similarity=0.195 Sum_probs=108.0
Q ss_pred ChhHH-HHHHHhhhcccCCCCCcChhHHHHHHHHHHHH--CCCceEEEeecC-------CCceEEEEecCCCCCCCcEEE
Q 018435 26 SDDSI-IERFRAYLQIDTSQPNPDYTNASKFILAQAEA--LSLESQTLEFAK-------NKPLILLKWPGSNPQLPSILL 95 (356)
Q Consensus 26 ~~~~~-~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~--~g~~~~~~~~~~-------~~~nv~~~~~g~~~~~~~il~ 95 (356)
+.+++ .++|++|+..+.. .+.+++++++||.++|++ +|++++...... ..+||+++++|+ ..+.|++
T Consensus 29 ~~~~~~~~~l~~L~~~r~~-~s~~~~~~~~~l~~~l~~~~~G~~v~~~~~~~~~~~g~~~~~Nvi~~~~g~--~~~~i~l 105 (329)
T 2afw_A 29 SISEMWQNDLQPLLIERYP-GSPGSYAARQHIMQRIQRLQADWVLEIDTFLSQTPYGYRSFSNIISTLNPT--AKRHLVL 105 (329)
T ss_dssp CHHHHHHHTTGGGCSCCCT-TSHHHHHHHHHHHHHHHTSSSCCEEEEEEEEECCTTSSEEEEEEEEESSTT--SSEEEEE
T ss_pred CHHHHHHHHHHHHcCCCCC-CCHHHHHHHHHHHHHHHhhCCCCEEEEEEEEecCCCCCceEeEEEEEECCC--CCcEEEE
Confidence 46788 8999999755543 245677899999999999 999887644322 258999999886 3479999
Q ss_pred EeecccCCCCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHc--------CCCCcccEEEEEeecccc
Q 018435 96 NSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS--------GFQPVRSVYLSFVPDEEI 167 (356)
Q Consensus 96 ~aH~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~--------~~~~~~~i~~~~~~~EE~ 167 (356)
.||+|+|+.+ .| ++++ |+|+.||++|+|++|++++.|++. +..++++|.|+|+.+||.
T Consensus 106 ~aH~Dsv~~~--~~-----------~~~~-~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~~i~~~~~~~EE~ 171 (329)
T 2afw_A 106 ACHYDSKYFS--HW-----------NNRV-FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEA 171 (329)
T ss_dssp EEECCCCCCC--CB-----------TTBC-CCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCEEEEEEEESCCSC
T ss_pred EEeccCCCcC--cc-----------cCcC-CCCcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCccEEEEEecCccc
Confidence 9999999975 33 2444 789999999999999999999875 346789999999999997
Q ss_pred --------CccccHHHHhcc
Q 018435 168 --------GGHDGAEKFADS 179 (356)
Q Consensus 168 --------g~~~G~~~~~~~ 179 (356)
| +.|+++++++
T Consensus 172 ~~~~~~~~g-l~Gs~~~~~~ 190 (329)
T 2afw_A 172 FLHWSPQDS-LYGSRHLAAK 190 (329)
T ss_dssp SSSCCSSSS-CHHHHHHHHH
T ss_pred ccccCCCcc-chhHHHHHHH
Confidence 5 5799998875
No 41
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.65 E-value=7.7e-16 Score=144.96 Aligned_cols=152 Identities=17% Similarity=0.139 Sum_probs=113.8
Q ss_pred hHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCCCCCCcEEEEeecccCCC---
Q 018435 28 DSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPS--- 104 (356)
Q Consensus 28 ~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~~~~~~il~~aH~Dtvp~--- 104 (356)
.+++++|++|+++||+ ++.|.++++++.++|+++|++++. +..+|+++.++|++ .|.|+|.||+|||+.
T Consensus 5 ~~~~~~l~~Lv~~~s~--sg~e~~~~~~l~~~l~~~g~~~~~----d~~gnlia~~~g~~--~~~i~l~aH~DtV~~~v~ 76 (346)
T 1vho_A 5 METGKLLMELSNLDGP--SGYETNVVSYIKSVIEPFVDEAKT----TRHGSLIGYKKGKG--IGKLAFFAHVDEIGFVVS 76 (346)
T ss_dssp CCHHHHHHHHHHSCCB--TTCCHHHHHHHHHHHGGGCSEEEE----CTTSCEEEEECCSS--SCEEEEEEECCBCCEEEE
T ss_pred HHHHHHHHHHHcCCCC--CcchHHHHHHHHHHHHhhCCEEEE----ecCCcEEEEEcCCC--CceEEEEecCcccceEeE
Confidence 4578999999999996 678899999999999999998775 67889999997753 389999999999952
Q ss_pred ----------CCCCCCCCCCC--------------ee-------------------------------------------
Q 018435 105 ----------EPSKWSHHPFG--------------AH------------------------------------------- 117 (356)
Q Consensus 105 ----------~~~~w~~~P~~--------------~~------------------------------------------- 117 (356)
.-.+|...++. +.
T Consensus 77 ~i~~G~l~~~~~Gg~~~~~~~g~~~~~~~~~g~~~G~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~~eei~~G~~~~~~ 156 (346)
T 1vho_A 77 KVEGQFARLEPVGGVDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSESRKKVPTYDEIFVDLSLCERGVRVGDIAVID 156 (346)
T ss_dssp EEETTEEEEEEC--------CCCEEEEEETTEEEEEETTCCCSCCCCHHHHHTSCCTTCCEEEGGGSSSCCCTTCEEEEC
T ss_pred EecCCeEEEEEeCCccCcccccCEEEEEcCCCcEEEEEcCCCcccCchhhcccCCChhHeEEEeccchhcCCCCCEEEEc
Confidence 01245432211 11
Q ss_pred ----eCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHHHhccccccCCceEEEEec
Q 018435 118 ----LDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDE 193 (356)
Q Consensus 118 ----~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~~~~~ 193 (356)
+ .+++++|| ..|||.++++++.+++.+++.+ +++++.++|+.+||.|. .|+..... .. ..++++++|.
T Consensus 157 ~~~~~-~g~~i~g~-~~D~r~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~-~Ga~~~~~--~i-~~~~~i~~D~ 228 (346)
T 1vho_A 157 QTAFE-TNGKVVGK-ALDNRASCGVLVKVLEFLKRYD--HPWDVYVVFSVQEETGC-LGALTGAY--EI-NPDAAIVMDV 228 (346)
T ss_dssp CCCEE-ETTEEEET-THHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEECTTSSSH-HHHHHTTC--CC-CCSEEEEEEE
T ss_pred cchhh-hcCeEEec-cCccHHHHHHHHHHHHHhhhcC--CCceEEEEEECCcccch-hhHHHHhc--cc-CCCEEEEeec
Confidence 1 12779999 4699999999999999987654 46899999999999995 68876443 22 3467888886
Q ss_pred Cc
Q 018435 194 GL 195 (356)
Q Consensus 194 g~ 195 (356)
..
T Consensus 229 ~~ 230 (346)
T 1vho_A 229 TF 230 (346)
T ss_dssp EC
T ss_pred cc
Confidence 43
No 42
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.64 E-value=2e-15 Score=142.18 Aligned_cols=145 Identities=20% Similarity=0.272 Sum_probs=113.2
Q ss_pred HHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCCCCCCcEEEEeecccCC--------
Q 018435 32 ERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVP-------- 103 (356)
Q Consensus 32 ~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~~~~~~il~~aH~Dtvp-------- 103 (356)
++|++|+++||+ ++.|.++++++.++|+++|+++.. +..+|+++.++|++ .|+|++.||+|||+
T Consensus 7 ~~l~~Lv~~~s~--sg~e~~~~~~l~~~l~~~g~~v~~----d~~gnlia~~~g~~--~~~vll~aH~DtV~~~v~~i~~ 78 (348)
T 1ylo_A 7 SLLKALSEADAI--ASSEQEVRQILLEEAARLQKEVRF----DGLGSVLIRLNEST--GPKVMICAHMDEVGFMVRSISR 78 (348)
T ss_dssp HHHHHHHHSCCB--TTBCHHHHHHHHHHHHHTTCCEEE----CTTCCEEEECCCCS--SCEEEEEEECCCCEEEEEEECT
T ss_pred HHHHHHHcCCCC--CCchHHHHHHHHHHHHhhCCEEEE----ecCCCEEEEecCCC--CceEEEEEcCCccceEEEEECC
Confidence 789999999996 678889999999999999998764 67789999987752 47999999999995
Q ss_pred --------CCCCCCCCC------------------------------------------------------------CCC
Q 018435 104 --------SEPSKWSHH------------------------------------------------------------PFG 115 (356)
Q Consensus 104 --------~~~~~w~~~------------------------------------------------------------P~~ 115 (356)
.+ +|... +|+
T Consensus 79 ~G~~~~~~~G--g~~~~~~~g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~id~G~~s~~~~~~~gi~~g~~i~~~~~~~ 156 (348)
T 1ylo_A 79 EGAIDVLPVG--NVRMAARQLQPVRITTREECKIPGLLDGDRQGNDVSAMRVDIGARTYDEVMQAGIRPGDRVTFDTTFQ 156 (348)
T ss_dssp TCCEEEEEES--CCCGGGSSSEEEEEECTTCCEEEEEEEEEEETTEEEEEEEECSCCSHHHHHHTTCCTTCEEEECCCCE
T ss_pred CCeEEEEecC--CcchhhccCCEEEEEeCCCCCCcchhhhhccCCChhHEEEEecCCCHHHHHHcCCCCCCEEEEccccE
Confidence 22 22111 111
Q ss_pred eeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHHHhccccccCCceEEEEecCc
Q 018435 116 AHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGL 195 (356)
Q Consensus 116 ~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~~~~~g~ 195 (356)
.. .+|+++|| ..|||.|+++++++++.+++.+ ++.++.++|+.+||.|+ .|+...... + ..++++++|...
T Consensus 157 -~~-~~~~~~~~-~~D~k~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~-~Ga~~~~~~--i-~~~~~i~~D~~~ 227 (348)
T 1ylo_A 157 -VL-PHQRVMGK-AFDDRLSCYLLVTLLRELHDAE--LPAEVWLVASSSEEVGL-RGGQTATRA--V-SPDVAIVLDTAC 227 (348)
T ss_dssp -EE-TTTEEEET-THHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEESCCTTSS-HHHHHHHHH--H-CCSEEEEECCCC
T ss_pred -Ee-cCCEEEec-CcccHHHHHHHHHHHHHhhhcC--CCceEEEEEEcccccch-hHHHHhhcc--c-CCCEEEEEeccc
Confidence 12 57899999 6799999999999999987654 56899999999999986 687655432 2 246788888643
No 43
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.62 E-value=1.5e-14 Score=133.96 Aligned_cols=159 Identities=16% Similarity=0.176 Sum_probs=118.8
Q ss_pred CCCChhHHHHHHHhhhcccCC-CCCcChhHHHHHHHHHHHHCCCceEEEeec----C----CCceEEEEecCCCCCCCcE
Q 018435 23 PAKSDDSIIERFRAYLQIDTS-QPNPDYTNASKFILAQAEALSLESQTLEFA----K----NKPLILLKWPGSNPQLPSI 93 (356)
Q Consensus 23 ~~~~~~~~~~~l~~l~~i~s~-s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~----~----~~~nv~~~~~g~~~~~~~i 93 (356)
.+.+.+++.+.+++++++... ..+.+..++++||.+.|+++|++++..... . ...||+++++|+. .+.|
T Consensus 20 p~f~~~~a~~~l~~l~~fgpR~~gS~~~~~a~~~i~~~l~~~g~~v~~q~~~~~~~~~~~~~~~Nii~~~~g~~--~~~i 97 (309)
T 4fuu_A 20 PQFDADSAYLYVKNQVDFGPRVPNTKEHVACGNYLAGKLEAFGAKVTNQYADLIAYDGTLLKARNIIGSYKPES--KKRI 97 (309)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTC--SSEE
T ss_pred CccCHHHHHHHHHHHhCcCCcCCCCHHHHHHHHHHHHHHHHcCCeeEEEeEEeccCCCCcceeEEEEEEECCCC--CceE
Confidence 356789999999999998553 345677899999999999999988765432 1 1359999999875 3789
Q ss_pred EEEeecccCCCCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCc----
Q 018435 94 LLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGG---- 169 (356)
Q Consensus 94 l~~aH~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~---- 169 (356)
++.||+|++|..+..... .+......|+.|+.+|+|++|++++.|.+. +++++|.|+|+.+||.|.
T Consensus 98 ~l~aH~Ds~~~~~~~~~~--------~~~~~~~~GA~D~aSG~a~lLE~ar~l~~~--~~~~~i~~~~~~~EE~Gl~~~~ 167 (309)
T 4fuu_A 98 ALFAHWDTRPWADNDADE--------KNHHTPILGANDGASGVGALLEIARLVNQQ--QPELGIDIIFLDAEDYGTPQFY 167 (309)
T ss_dssp EEEEECCCCSCCTTCSSG--------GGTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEEEEECSSSCCCCTTC
T ss_pred EEEeecCCCCCCCCcccc--------ccccCCcCCcccCchhHHHHHHHHHHHhhc--CCCCceEEEeecccccCccccc
Confidence 999999999876421100 111122349999999999999999999886 468999999999999883
Q ss_pred ---------cccHHHHhccccc--cCCceEEEEec
Q 018435 170 ---------HDGAEKFADSHVF--NSLNVGIVLDE 193 (356)
Q Consensus 170 ---------~~G~~~~~~~~~~--~~~~~~~~~~~ 193 (356)
+.|+++++++... ..+...+.+|.
T Consensus 168 ~~~~~~~~~l~GS~~~~~~~~~~~~~i~~~inlDm 202 (309)
T 4fuu_A 168 EGKHKEEAWCLGSQYWSRNPHVQGYNARFGILLDM 202 (309)
T ss_dssp CSCCCGGGSCHHHHHHHHSCSSTTCCCSEEEEECS
T ss_pred cchhhhhhhhcchhHHHhcccccCcceEEEEeeec
Confidence 2588888876322 23455666653
No 44
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.58 E-value=2.5e-14 Score=134.52 Aligned_cols=152 Identities=17% Similarity=0.187 Sum_probs=116.0
Q ss_pred HHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCCCCCCcEEEEeecccCC-----
Q 018435 29 SIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVP----- 103 (356)
Q Consensus 29 ~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~~~~~~il~~aH~Dtvp----- 103 (356)
+++++|++|+++||+ ++.|.++++++.++|+++|++++. +..+|+++.++|++++.|+|+|.||||+|+
T Consensus 4 ~~~~~l~~L~~ips~--SG~E~~v~~~l~~~l~~~g~~~~~----D~~GNli~~~~g~~~~~~~v~l~aHmD~Vg~mV~~ 77 (355)
T 3kl9_A 4 TLFSKIKEVTELAAV--SGHEAPVRAYLREKLTPHVDEVVT----DGLGGIFGIKHSEAVDAPRVLVASHMDEVGFMVSE 77 (355)
T ss_dssp HHHHHHHHHHTSCCB--TTCCHHHHHHHHHHHGGGSSEEEE----CTTSCEEEEECCCSTTCCEEEEEEECCBCEEEEEE
T ss_pred HHHHHHHHHHhCCCC--CCCHHHHHHHHHHHHHHhCCEEEE----CCCCeEEEEECCcCCCCCeEEEEeccccccceEEE
Confidence 678999999999995 789999999999999999998876 788999999988652358999999999991
Q ss_pred -----------CCCCCCCCC--------------C-CCee----------------------------------------
Q 018435 104 -----------SEPSKWSHH--------------P-FGAH---------------------------------------- 117 (356)
Q Consensus 104 -----------~~~~~w~~~--------------P-~~~~---------------------------------------- 117 (356)
.+ +|... + +.++
T Consensus 78 I~~~G~l~~~~iG--G~~~~~~~~~~v~i~t~~g~~~~Gvig~~~~H~~~~~~~~~~~~~~~~~iD~g~~s~ee~~~~GI 155 (355)
T 3kl9_A 78 IKPDGTFRVVEIG--GWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTRGKGGPTMPAIADIVFDGGFADKAEAESFGI 155 (355)
T ss_dssp ECTTSCEEEEEES--CCCTTTCSSCEEEEECTTSCEEEEEEC---------------CCGGGSCEECCCSSHHHHHHTTC
T ss_pred ECCCCEEEEEecC--CccccccCCCEEEEEcCCCCEEEEEEeCccccccChhhccCCCChhhEEEEeccCCHHHHHHcCC
Confidence 11 11100 0 0000
Q ss_pred -------------eCC-CCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHHHhcccccc
Q 018435 118 -------------LDS-QGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFN 183 (356)
Q Consensus 118 -------------~~~-~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~ 183 (356)
... ++++.|| +.||+.++++++++++.+++. .+..+++++|+..||.|+ +|+...... +
T Consensus 156 ~~Gd~v~~d~~~~~~~~~~~i~s~-~lDnr~g~~~~l~~l~~l~~~--~~~~~v~~~ft~qEEvG~-~Ga~~a~~~--~- 228 (355)
T 3kl9_A 156 RPGDTIVPDSSAILTANEKNIISK-AWDNRYGVLMVSELAEALSGQ--KLGNELYLGSNVQEEVGL-RGAHTSTTK--F- 228 (355)
T ss_dssp CTTCEEEECCCCEECTTSSEEEES-CHHHHHHHHHHHHHHHHHSSC--CCSSEEEEEEESCCTTTS-HHHHHHHHH--H-
T ss_pred CCCCEEEeccceEEecCCCEEEee-ccccHHHHHHHHHHHHHhhhc--CCCceEEEEEECccccCc-chhHHHHhc--c-
Confidence 112 3578888 779999999999999998754 467899999999999996 687654432 2
Q ss_pred CCceEEEEecCc
Q 018435 184 SLNVGIVLDEGL 195 (356)
Q Consensus 184 ~~~~~~~~~~g~ 195 (356)
..|+++++|.+.
T Consensus 229 ~pd~~i~~D~~~ 240 (355)
T 3kl9_A 229 DPEVFLAVDCSP 240 (355)
T ss_dssp CCSEEEEEEEEE
T ss_pred CCCEEEEecCcc
Confidence 246788888653
No 45
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=99.57 E-value=2.2e-14 Score=133.07 Aligned_cols=137 Identities=13% Similarity=0.104 Sum_probs=106.1
Q ss_pred CChhHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEeecC--------CCceEEEEecCCCCCCCcEEEE
Q 018435 25 KSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAK--------NKPLILLKWPGSNPQLPSILLN 96 (356)
Q Consensus 25 ~~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~--------~~~nv~~~~~g~~~~~~~il~~ 96 (356)
.....+-+.|..++ +|-...+.+..++++||.+.|+++|++++...... ...||+++++|+. .+.|++.
T Consensus 8 d~~~~~~~~l~~il-~PR~~gs~~~~~~~~~i~~~l~~~g~~v~~~~f~~~~~~~~~~~~~Nii~~~~~~~--~~~vvl~ 84 (312)
T 4f9u_A 8 DDEVHFNRTLDSIL-VPRVVGSRGHQQVREYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVGTINPQA--QNFLALA 84 (312)
T ss_dssp CCHHHHHHHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEEESTTS--SEEEEEE
T ss_pred CHHHHHHHHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEeEEEecCCCCceeEEEEEEEECCCC--CceEEEE
Confidence 34445556676664 57665567789999999999999999887655321 1259999999864 3689999
Q ss_pred eecccCCCCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHc-----CCCCcccEEEEEeeccccC---
Q 018435 97 SHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS-----GFQPVRSVYLSFVPDEEIG--- 168 (356)
Q Consensus 97 aH~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~-----~~~~~~~i~~~~~~~EE~g--- 168 (356)
||+|+++.... .+ ..|+.|+.+|+|++|++++.|.+. +.+++++|+|+|+.+||.|
T Consensus 85 aHyDs~~~~~~----~~------------~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaEE~G~~~ 148 (312)
T 4f9u_A 85 CHYDSKYFPND----PG------------FVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAFKEW 148 (312)
T ss_dssp EECCCCCCTTC----TT------------CCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCCSCSSSC
T ss_pred EEEecCCCCCC----CC------------CCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCccccccC
Confidence 99999976421 11 239999999999999999999752 4568999999999999987
Q ss_pred ----ccccHHHHhccc
Q 018435 169 ----GHDGAEKFADSH 180 (356)
Q Consensus 169 ----~~~G~~~~~~~~ 180 (356)
++.|+++++++.
T Consensus 149 ~~~~~L~GS~~~a~~~ 164 (312)
T 4f9u_A 149 TDADSVYGSKHLAAKL 164 (312)
T ss_dssp SSSSSCHHHHHHHHHH
T ss_pred CccccccChHHHHHHH
Confidence 256999999863
No 46
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.56 E-value=1.7e-15 Score=141.14 Aligned_cols=150 Identities=15% Similarity=0.073 Sum_probs=108.1
Q ss_pred ChhHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEe---ecCCCceEEEEecCCCCCCCcEEEEeecccC
Q 018435 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLE---FAKNKPLILLKWPGSNPQLPSILLNSHTDVV 102 (356)
Q Consensus 26 ~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~---~~~~~~nv~~~~~g~~~~~~~il~~aH~Dtv 102 (356)
..++++++|++|+++||. +++|.+++++|.++|+++|++++..+ ...+.+|+++.++| + |.|+|.||||||
T Consensus 15 ~~~~~~~~l~~Lv~i~s~--sg~e~~v~~~l~~~l~~~g~~v~~d~~~~~~~~~gnlia~~~g---~-~~ill~aH~DtV 88 (321)
T 3cpx_A 15 LYFQGMQLLKELCSIHAP--SGNEEPLKDFILEYIRSNAGSWSYQPVIYADNDLQDCIVLVFG---N-PRTAVFAHMDSI 88 (321)
T ss_dssp GGCCHHHHHHHHHHSCCB--TTCCHHHHHHHHHHHHHHGGGSSSCCEEECSGGGTTCEEEEES---S-CSEEEEEECCBC
T ss_pred HHHHHHHHHHHHHcCCCC--CCCHHHHHHHHHHHHHhhCCeEEEccccccccCCccEEEEecC---C-ceEEEEecCCcC
Confidence 346789999999999996 67899999999999999999765411 01126899999876 3 789999999999
Q ss_pred C-----------CCCCCCCC---CC---------CCe-----------------------------eeCCCCeEEecCcc
Q 018435 103 P-----------SEPSKWSH---HP---------FGA-----------------------------HLDSQGNIFARGSQ 130 (356)
Q Consensus 103 p-----------~~~~~w~~---~P---------~~~-----------------------------~~~~~g~~~GrG~~ 130 (356)
+ .++ |.. .+ +.+ ++ .+|+++|| ..
T Consensus 89 ~~~v~~i~~~~~~Gg--~~~~~~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd~v~~~~~~~~-~~g~i~~~-~~ 164 (321)
T 3cpx_A 89 GFTVSYNNHLHPIGS--PSAKEGYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGTEVTFKPDFRE-EGDFILTP-YL 164 (321)
T ss_dssp EEEECSTTBEEEESS--CCCCTTCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTCEEEECCCCEE-ETTEEECT-TH
T ss_pred CeEecccCCeEEcCC--hhhcccCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCCEEEeccCcEE-EcCEEEEc-CC
Confidence 4 332 322 11 111 11 13788889 57
Q ss_pred cchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHHHhc--cccccCCceEEEEecCc
Q 018435 131 DMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFAD--SHVFNSLNVGIVLDEGL 195 (356)
Q Consensus 131 D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~--~~~~~~~~~~~~~~~g~ 195 (356)
|||+|+++++++++.++ + ++++|+.+||.|+ .|++.... ...+ ..++++++|.+.
T Consensus 165 D~k~G~aa~l~al~~l~-----~---i~~~~t~~EEvG~-~Ga~~a~~~~~~~~-~~~~~i~~D~~~ 221 (321)
T 3cpx_A 165 DDRLGVWTALELAKTLE-----H---GIIAFTCWEEHGG-GSVAYLARWIYETF-HVKQSLICDITW 221 (321)
T ss_dssp HHHHHHHHHHHHTTTCC-----S---EEEEEESSTTTTC-CSHHHHHHHHHHHH-CCCEEEECCCEE
T ss_pred cCHHHHHHHHHHHHHhc-----C---cEEEEECCccCch-hcchhhhhcccccc-CCCEEEEEeCcc
Confidence 99999999999988654 1 8899999999996 68774321 1112 346788887643
No 47
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=99.56 E-value=2.2e-14 Score=133.37 Aligned_cols=150 Identities=16% Similarity=0.156 Sum_probs=111.1
Q ss_pred CChhHHHH-HHHhhhcccCCCCCcChhHHHHHHHHHHHHC--CCceEEEeecC-------CCceEEEEecCCCCCCCcEE
Q 018435 25 KSDDSIIE-RFRAYLQIDTSQPNPDYTNASKFILAQAEAL--SLESQTLEFAK-------NKPLILLKWPGSNPQLPSIL 94 (356)
Q Consensus 25 ~~~~~~~~-~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~--g~~~~~~~~~~-------~~~nv~~~~~g~~~~~~~il 94 (356)
.+.+++.+ .|+.+ -++-...+.++.++++||.++|+++ |++++...... ...||+++++|+. .+.|+
T Consensus 36 ~~~~~~~~~~L~~~-~~~R~~gS~~~~~a~~~l~~~l~~~~~g~~v~~d~f~~~~~~g~~~~~Nvia~~~g~~--~~~iv 112 (330)
T 3pb6_X 36 LDPQRLWSTYLRPL-LVVRTPGSPGNLQVRKFLEATLRSLTAGWHVELDPFTASTPLGPVDFGNVVATLDPRA--ARHLT 112 (330)
T ss_dssp CCHHHHHHHTTGGG-CSCCCTTSHHHHHHHHHHHHHHHHSTTCCEEEEEEEEEEETTEEEEEEEEEEESCTTS--SEEEE
T ss_pred CCHHHHHHHHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEEeeecccccCCccceEEEEEECCCC--CceEE
Confidence 45567766 57666 3344334677889999999999999 88777543321 2379999998874 37899
Q ss_pred EEeecccCCCCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHc-----CCCCcccEEEEEeecccc--
Q 018435 95 LNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS-----GFQPVRSVYLSFVPDEEI-- 167 (356)
Q Consensus 95 ~~aH~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~-----~~~~~~~i~~~~~~~EE~-- 167 (356)
+.||+|+|+.... + -...|+.|+.+|+|++|++++.|.+. +..++++|.|+|+.+||.
T Consensus 113 l~aH~Dsv~~~~g--------------~-~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~~~~EE~f~ 177 (330)
T 3pb6_X 113 LACHYDSKLFPPG--------------S-TPFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLFLDGEEALK 177 (330)
T ss_dssp EEEECCCCCCCTT--------------S-CCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEEESCCSCSS
T ss_pred EEeccCCCCCCCC--------------C-cCcCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEEEcCccccc
Confidence 9999999975210 0 12459999999999999999999873 346799999999999998
Q ss_pred ------CccccHHHHhccc----------cccCCceEEEEec
Q 018435 168 ------GGHDGAEKFADSH----------VFNSLNVGIVLDE 193 (356)
Q Consensus 168 ------g~~~G~~~~~~~~----------~~~~~~~~~~~~~ 193 (356)
| +.|+++++++. ...++...+.+|.
T Consensus 178 ~w~~~~g-l~GS~~~a~~~~~~~~~~~~~~~~~i~~~inlDm 218 (330)
T 3pb6_X 178 EWGPKDS-LYGSRHLAQLMESIPHSPGPTRIQAIELFMLLDL 218 (330)
T ss_dssp CCSTTSS-CHHHHHHHHHHHHSBCSSCSBTTTTEEEEEEEES
T ss_pred ccCCCCC-CccHHHHHHHHHhcCCccccchhhCeEEEEeccC
Confidence 6 57999988751 1234555666663
No 48
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=99.55 E-value=1.1e-17 Score=155.40 Aligned_cols=186 Identities=10% Similarity=0.077 Sum_probs=113.0
Q ss_pred HHHHHhhhcccCCCCCcChh-HHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCCCCCCcEEEEeecccCCCCCCCC
Q 018435 31 IERFRAYLQIDTSQPNPDYT-NASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEPSKW 109 (356)
Q Consensus 31 ~~~l~~l~~i~s~s~~~~e~-~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~~~~~~il~~aH~Dtvp~~~~~w 109 (356)
+++|++|++|||+ |+.|+ +++++|.++|+++|++++. |+.+||+++++|+ .|+|+|.|||||||.....
T Consensus 12 ~elL~~Lv~ipS~--sg~E~~~v~~~l~~~l~~~G~~v~~----D~~GNlia~~~g~---~p~lll~~H~Dtvp~~v~~- 81 (354)
T 2wzn_A 12 WKLMQEIIEAPGV--SGYEHLGIRDIVVDVLKEVADEVKV----DKLGNVIAHFKGS---SPRIMVAAHMDKIGVMVNH- 81 (354)
T ss_dssp HHHHHHHHHSCCB--TTCGGGTHHHHHHHHHHTTSSEEEE----CTTCCEEEEECCS---SSEEEEEEECCBCEEEEEE-
T ss_pred HHHHHHHhcCCCC--CcchHHHHHHHHHHHHHHcCCEEEE----eCCCeEEEEECCC---CceEEEEeccccCCCcCCe-
Confidence 5899999999996 56664 6899999999999998876 7888999999764 4799999999999875311
Q ss_pred CCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHHHhccccccCCceEE
Q 018435 110 SHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGI 189 (356)
Q Consensus 110 ~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~ 189 (356)
++++|.++++|..+.++.++.. .++..+...+ .+...+.+++..+||.+. .|.+.+.....+... +.
T Consensus 82 --------~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~ee~~~-~~~~~~~~~~~~~~~--g~ 148 (354)
T 2wzn_A 82 --------IDKDGYLHIVPIGGVLPETLVA-QRIRFFTEKG-ERYGVVGVLPPHLRRGQE-DKGSKIDWDQIVVDV--GA 148 (354)
T ss_dssp --------ECTTSCEEEEEESSCCGGGGTT-CEEEEEETTE-EEEEEECCCCGGGC----------CCGGGCCEEC--SC
T ss_pred --------eecCCceeeccCCCccHHHHHH-HHHHHhhccC-CccceEEEeeeeeEeccc-ccccchhhhhhhhhh--cc
Confidence 2278888888876666544322 2222222333 345667778888898775 466655443222111 11
Q ss_pred EEecCccCcCCcceeEEeeeeeEEEEEEEEecCCccCCCCCC-CHHHHHHHHHHH
Q 018435 190 VLDEGLASTTEDYRAFYAERCPWWLVIKARGAPGHGAKLYDN-SAMENLFKSIES 243 (356)
Q Consensus 190 ~~~~g~~~p~~~~~i~~~~~G~~~~~v~~~G~~~Hs~~p~~g-nai~~~~~~~~~ 243 (356)
... .+.....+..+..+.........+...|++.+..+ +++..+..++..
T Consensus 149 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (354)
T 2wzn_A 149 SSK----EEAEEMGFRVGTVGEFAPNFTRLNEHRFATPYLDDRICLYAMIEAARQ 199 (354)
T ss_dssp SSH----HHHHHTTCCTTCEEEECCCCEECSSSEEECTTHHHHHHHHHHHHHHHH
T ss_pred cch----hhhhccccccceeeeeeeeeEeecccccccccccccchhhhHHHHHHH
Confidence 110 11112244455566666677777877777654433 444444444433
No 49
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=99.53 E-value=9e-14 Score=129.80 Aligned_cols=147 Identities=16% Similarity=0.135 Sum_probs=111.1
Q ss_pred hhHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEeecC--------CCceEEEEecCCCCCCCcEEEEee
Q 018435 27 DDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAK--------NKPLILLKWPGSNPQLPSILLNSH 98 (356)
Q Consensus 27 ~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~--------~~~nv~~~~~g~~~~~~~il~~aH 98 (356)
...+.+.|..+. +|-...+.+..++++||.+.|+++|++++...... ...||+++++|+. ...|++.||
T Consensus 37 ~~~~~~~l~~il-~pR~~Gs~~~~~~~~~i~~~l~~~g~~v~~q~f~~~~~~~~~~~~~Nii~~~~~~~--~~~i~l~aH 113 (330)
T 4fai_A 37 KLHLREAIDKIL-IPRVVGTTNHSIVREYIVQSLRDLDWDVEVNSFHDHAPIKGKLHFHNIIATLNPNA--ERYLVLSCH 113 (330)
T ss_dssp HHHHHHHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEESCTTC--SEEEEEEEE
T ss_pred HHHHHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEeeeeeecCCCCceeEEEEEEEECCCC--CcEEEEEEe
Confidence 455666666664 57665567889999999999999999987655431 1259999998764 368999999
Q ss_pred cccCCCCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHH---cCCCCcccEEEEEeeccccCc------
Q 018435 99 TDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKA---SGFQPVRSVYLSFVPDEEIGG------ 169 (356)
Q Consensus 99 ~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~---~~~~~~~~i~~~~~~~EE~g~------ 169 (356)
+|+++..+. + ..|+.|+.+|+|++|++++.|.+ .+..++++|.|+|+.+||.|-
T Consensus 114 yDs~~~~~~--------------~---~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~Gl~~~~~~ 176 (330)
T 4fai_A 114 YDSKYMPGV--------------E---FLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFEEWGPKD 176 (330)
T ss_dssp CCCCCCTTS--------------C---CCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCSSSCBTTB
T ss_pred ecccccccC--------------C---CCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEeccccccccccccc
Confidence 999976421 1 23999999999999999999875 345689999999999999873
Q ss_pred -cccHHHHhccc----cccCCceEEEEec
Q 018435 170 -HDGAEKFADSH----VFNSLNVGIVLDE 193 (356)
Q Consensus 170 -~~G~~~~~~~~----~~~~~~~~~~~~~ 193 (356)
+.|+++++++. ....+...+.+|.
T Consensus 177 ~llGS~~~a~~~~~~~~~~~i~~~inlDm 205 (330)
T 4fai_A 177 SIYGARHLAKKWHHEGKLDRIDMLVLLDL 205 (330)
T ss_dssp SCHHHHHHHHHHHHTTCSTTEEEEEEECS
T ss_pred hhhhhHHHHhcchhccchhceeEEEEecc
Confidence 35999998752 2334455566653
No 50
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=99.45 E-value=3.7e-13 Score=126.42 Aligned_cols=148 Identities=15% Similarity=0.172 Sum_probs=110.3
Q ss_pred HHHHHHHhhhcccCCCCCcChh-HHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCCCCCCcEEEEeecccCCC---
Q 018435 29 SIIERFRAYLQIDTSQPNPDYT-NASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVVPS--- 104 (356)
Q Consensus 29 ~~~~~l~~l~~i~s~s~~~~e~-~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~~~~~~il~~aH~Dtvp~--- 104 (356)
.++++|++|+++||+ ++.|. ++++++.++++++|++++. +..+|+++.++|++ |+|+|.||||+|+.
T Consensus 10 ~~~~~l~~L~~ipsp--SG~E~~~v~~~l~~~l~~~g~~~~~----D~~GNvi~~~~g~~---~~v~l~aHmDtVg~mV~ 80 (354)
T 2vpu_A 10 VDWKLMQEIIEAPGV--SGYEHLGIRDIVVDVLKEVADEVKV----DKLGNVIAHFKGSS---PRIMVAAHMDKIGVMVN 80 (354)
T ss_dssp CCHHHHHHHHHSCCB--TTCGGGTHHHHHHHHHHTTCSEEEE----CTTCCEEEEECCSS---SEEEEECCCCBCEEEEE
T ss_pred HHHHHHHHHHhCCCC--CcccHHHHHHHHHHHHHHhCCEEEE----cCCCeEEEEEcCCC---CEEEEEecccccceeEE
Confidence 468999999999995 78999 9999999999999998876 78899999998753 89999999999910
Q ss_pred --CC---------CCCC-------------------------------------CC-CCC-ee-----------------
Q 018435 105 --EP---------SKWS-------------------------------------HH-PFG-AH----------------- 117 (356)
Q Consensus 105 --~~---------~~w~-------------------------------------~~-P~~-~~----------------- 117 (356)
.+ .+|. .. .++ ..
T Consensus 81 ~I~~~G~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~Gvi~~~~~H~~~~~~~~~~~~~~~~l~iD~g~~s~ee~~~~GI~ 160 (354)
T 2vpu_A 81 HIDKDGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQEDKGSKIDWDQIVVDVGASSKEEAEEMGFR 160 (354)
T ss_dssp EECTTSCEEEEEESSCCGGGGTTCEEEEEETTEEEEEEECCCCSTTC---------CCGGGCCEECSCSSHHHHHHTTCC
T ss_pred EECCCCEEEEEccCCcccccccCCEEEEEcCCCcEEEEEcCCCccccCcccccccCCCcceEEEEecCCCHHHHHhcCCC
Confidence 00 0110 00 000 00
Q ss_pred ------------eCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHHHhccccccCC
Q 018435 118 ------------LDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSL 185 (356)
Q Consensus 118 ------------~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~ 185 (356)
...++++.++ +.||+.++++++++++.+++ +..+++++|+..||.|+ +|+...... + ..
T Consensus 161 ~Gd~v~~d~~~~~~~~~~i~s~-~lDnr~g~~~~l~~l~~l~~----~~~~v~~~ft~qEEVG~-~ga~~aa~~--i-~p 231 (354)
T 2vpu_A 161 VGTVGEFAPNFTRLNEHRFATP-YLDDRICLYAMIEAARQLGD----HEADIYIVGSVQEEVGL-RGARVASYA--I-NP 231 (354)
T ss_dssp TTCEEEECCCCEECSSSEEECT-THHHHHHHHHHHHHHHHCCC----CSSEEEEEECSCCTTTS-HHHHHHHHH--H-CC
T ss_pred CCCEEEEeeEEEEeCCceEEEe-cCccHHHHHHHHHHHHHhhc----CCCeEEEEEECCcccCc-cchhhhhcc--c-CC
Confidence 0145677777 67999999999999987753 57899999999999996 677643331 2 24
Q ss_pred ceEEEEecC
Q 018435 186 NVGIVLDEG 194 (356)
Q Consensus 186 ~~~~~~~~g 194 (356)
|+++++|.+
T Consensus 232 d~~i~~Dv~ 240 (354)
T 2vpu_A 232 EVGIAMDVT 240 (354)
T ss_dssp SEEEEEEEE
T ss_pred CEEEEeccc
Confidence 678888864
No 51
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=99.35 E-value=3.4e-12 Score=119.19 Aligned_cols=145 Identities=18% Similarity=0.160 Sum_probs=109.0
Q ss_pred hHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEeecCCCceEEEEecCCCCCCCcEEEEeecccC-----
Q 018435 28 DSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAKNKPLILLKWPGSNPQLPSILLNSHTDVV----- 102 (356)
Q Consensus 28 ~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~nv~~~~~g~~~~~~~il~~aH~Dtv----- 102 (356)
-.+.++|++|+++|++ ++.|.++++++.++++++|.+++. |..+|+++.+ |. +.|+|+|.||||+|
T Consensus 11 ~~~~~~l~~L~~~psp--SG~E~~v~~~i~~~l~~~~~e~~~----D~~Gnvi~~~-g~--~~~~v~l~aHmDevG~mV~ 81 (343)
T 3isx_A 11 HHMKELIRKLTEAFGP--SGREEEVRSIILEELEGHIDGHRI----DGLGNLIVWK-GS--GEKKVILDAHIDEIGVVVT 81 (343)
T ss_dssp SCCHHHHHHHHHSCCB--TTCCHHHHHHHHHHHTTTCSEEEE----CTTCCEEEEE-CC--CSSEEEEEEECCBCEEEEE
T ss_pred HHHHHHHHHHHhCCCC--CCchHHHHHHHHHHHHHhCCEEEE----CCCCCEEEEE-CC--CCCEEEEEecccccceEEE
Confidence 4467899999999995 789999999999999999988876 8899999988 43 35899999999999
Q ss_pred -----------CCCCCCCCCC-----------CCCee-------------------------------------------
Q 018435 103 -----------PSEPSKWSHH-----------PFGAH------------------------------------------- 117 (356)
Q Consensus 103 -----------p~~~~~w~~~-----------P~~~~------------------------------------------- 117 (356)
|.+ +|... .+.++
T Consensus 82 ~I~~~G~l~~~~vG--G~~~~~~~~~~v~i~t~~~Gvig~~~~H~~~~~~~~~~~~~~~l~iD~g~~s~ee~~~~I~vGd 159 (343)
T 3isx_A 82 NVDDKGFLTIEPVG--GVSPYMLLGKRIRFENGTIGVVGMEGETTEERQENVRKLSFDKLFIDIGANSREEAQKMCPIGS 159 (343)
T ss_dssp EECTTSCEEEEEES--SCCHHHHTTCEEEETTSCEEEEEECCCSHHHHHHHHHTCCGGGEEEECSCSSHHHHHHHSCTTC
T ss_pred EECCCCeEEEEecC--CcCccccCCcEEEEeccEEEEEecccccccChhhcccCCCcceEEEEeCCCCHHHHHhcCCCCC
Confidence 111 12100 01111
Q ss_pred ---------eCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHHHhccccccCCceE
Q 018435 118 ---------LDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVG 188 (356)
Q Consensus 118 ---------~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~ 188 (356)
. -++++.|+ +.||+.++++++++++.++. ..+++++|+..||.|+ +|+..... .+ ..|++
T Consensus 160 ~v~~~~~~~~-~~~~i~s~-~lDdR~g~~~~l~~l~~l~~-----~~~~~~~ft~qEEVG~-~Ga~~aa~--~i-~pd~~ 228 (343)
T 3isx_A 160 FGVYDSGFVE-VSGKYVSK-AMDDRIGCAVIVEVFKRIKP-----AVTLYGVFSVQEEVGL-VGASVAGY--GV-PADEA 228 (343)
T ss_dssp EEEESCCCEE-ETTEEEES-CHHHHHHHHHHHHHHHHCCC-----SSEEEEEEECCCCTTS-CCSTTTGG--GC-CCSEE
T ss_pred EEEecCceEE-eccEEEec-cCccHHHHHHHHHHHHhccC-----CCeEEEEEECCcccCc-hhHHHHhh--cC-CCCEE
Confidence 1 23677787 67999999999999887642 5789999999999996 67764333 22 24678
Q ss_pred EEEecC
Q 018435 189 IVLDEG 194 (356)
Q Consensus 189 ~~~~~g 194 (356)
+++|.+
T Consensus 229 i~vDv~ 234 (343)
T 3isx_A 229 IAIDVT 234 (343)
T ss_dssp EEEEEE
T ss_pred EEEeCc
Confidence 888864
No 52
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=99.24 E-value=1.5e-11 Score=118.70 Aligned_cols=96 Identities=20% Similarity=0.092 Sum_probs=77.9
Q ss_pred CceEEEEecCCCC---CCCcEEEEeecccCCCCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCC
Q 018435 76 KPLILLKWPGSNP---QLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQ 152 (356)
Q Consensus 76 ~~nv~~~~~g~~~---~~~~il~~aH~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~ 152 (356)
..||+++++|+++ ..+.|++.||+|+|+.+ +|+.|+++|++++|++++.|++. .
T Consensus 203 ~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~g---------------------~Ga~D~~~G~a~~le~~~~l~~~--~ 259 (421)
T 2ek8_A 203 SHNVIATKKPDANKKNTNDIIIIGSHHDSVEKA---------------------PGANDDASGVAVTLELARVMSKL--K 259 (421)
T ss_dssp EEEEEEEECCCSSTTCCCCEEEEEEECCCCTTC---------------------CCTTTTHHHHHHHHHHHHHHTTS--C
T ss_pred ccceEEEecCcccCCCCCCEEEEecccccCCCC---------------------CCCCCCcHhHHHHHHHHHHHhcc--C
Confidence 5799999998643 45899999999999864 38999999999999999999874 4
Q ss_pred CcccEEEEEeeccccCccccHHHHhcccc---ccCCceEEEEecCc
Q 018435 153 PVRSVYLSFVPDEEIGGHDGAEKFADSHV---FNSLNVGIVLDEGL 195 (356)
Q Consensus 153 ~~~~i~~~~~~~EE~g~~~G~~~~~~~~~---~~~~~~~~~~~~g~ 195 (356)
++++|+|+++.+||.|. .|+++++++.. ..+....+.+|..+
T Consensus 260 ~~~~i~~~~~~~EE~g~-~Gs~~~~~~~~~~~~~~~~~~in~D~~g 304 (421)
T 2ek8_A 260 TDTELRFITFGAEENGL-IGSKKYAASLSEDEIKRTIGMFQLDMVG 304 (421)
T ss_dssp CSSEEEEEEESSSTTTS-HHHHHHHTTCCHHHHHHEEEEEEECSCC
T ss_pred CCceEEEEEECCccccc-hhHHHHHHhCccchhhcEEEEEEecccC
Confidence 68999999999999985 79999998632 22344567777543
No 53
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.24 E-value=1.4e-11 Score=119.42 Aligned_cols=109 Identities=17% Similarity=0.170 Sum_probs=84.4
Q ss_pred hHHHHHHHHHHHHCC-CceEE-Eee----cCCCceEEEEecCCCCCCCcEEEEeecccCCCCCCCCCCCCCCeeeCCCCe
Q 018435 50 TNASKFILAQAEALS-LESQT-LEF----AKNKPLILLKWPGSNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGN 123 (356)
Q Consensus 50 ~~~~~~l~~~l~~~g-~~~~~-~~~----~~~~~nv~~~~~g~~~~~~~il~~aH~Dtvp~~~~~w~~~P~~~~~~~~g~ 123 (356)
.+.++.|.+.++.-. +.++. ++. .....||+++++|+++..+.|++.+|+|+++.+
T Consensus 203 ~~da~~L~~~l~~g~~~~v~l~~~~~~~~~~~~~Nvi~~~~g~~~~~~~i~~~aH~Ds~~~g------------------ 264 (444)
T 3iib_A 203 NPDADLINAMLKRDKEVVISLELGSERRGETTSYNVIAEVKGSTKADEIVLIGAHLDSWDEG------------------ 264 (444)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEEEEEEEEEEEEEEEEEEEECCSTEEEEEEEEEEECCCCSSS------------------
T ss_pred HHHHHHHHHHHhCCCCeEEEEEEeeeEcCCceeEEEEEEEeCCCCCCCEEEEEeecccCCCC------------------
Confidence 355666666665421 32221 011 124579999999986434789999999999864
Q ss_pred EEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHHHhccc
Q 018435 124 IFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSH 180 (356)
Q Consensus 124 ~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~ 180 (356)
+|+.|+++|++++|++++.|++.+..++++|+|+|+.+||.|. .|+++++++.
T Consensus 265 ---~Ga~D~~sG~a~~le~a~~l~~~~~~~~~~i~f~~~~~EE~gl-~Gs~~~~~~~ 317 (444)
T 3iib_A 265 ---TGAIDDGAGVAIVTAAAKHILDLPQKPERTIRVVLYAAEELGL-LGGKTYAKEH 317 (444)
T ss_dssp ---CCTTTTHHHHHHHHHHHHHHHTSSSCCSEEEEEEEESCGGGTS-HHHHHHHHHT
T ss_pred ---CCCccchHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCcccCC-cCHHHHHHhh
Confidence 3899999999999999999999887889999999999999985 6999999864
No 54
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=98.88 E-value=3.2e-09 Score=106.64 Aligned_cols=95 Identities=18% Similarity=0.174 Sum_probs=75.5
Q ss_pred CCceEEEEecCCCCCCCcEEEEeecccCCCCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHc----C
Q 018435 75 NKPLILLKWPGSNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKAS----G 150 (356)
Q Consensus 75 ~~~nv~~~~~g~~~~~~~il~~aH~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~----~ 150 (356)
...||+++++|+....+.|++.+|+|++.. |+.|+.+|++++|++++.|.+. +
T Consensus 265 ~~~NVi~~i~G~~~~~~~vvvgaH~Ds~~~-----------------------Ga~D~~sG~a~lLe~ar~l~~~~~~~g 321 (640)
T 3kas_A 265 KILNIFGVIKGFVEPDHYVVVGAQRDAWGP-----------------------GAAKSGVGTALLLKLAQMFSDMVLKDG 321 (640)
T ss_dssp EEEEEEEEECCSSEEEEEEEEEEECCCSSC-----------------------CTTTTHHHHHHHHHHHHHHHHHHHTSC
T ss_pred eEEEEEEEEeCCcCCCCceeeecccCCCCC-----------------------CCCcCcHHHHHHHHHHHHHHHhhhhcC
Confidence 457999999998422478999999999832 7889999999999999999864 6
Q ss_pred CCCcccEEEEEeeccccCccccHHHHhccc--cc-cCCceEEEEec
Q 018435 151 FQPVRSVYLSFVPDEEIGGHDGAEKFADSH--VF-NSLNVGIVLDE 193 (356)
Q Consensus 151 ~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~--~~-~~~~~~~~~~~ 193 (356)
.+|+++|+|+++.+||.|. .|+.+++++. .+ .++...+.+|.
T Consensus 322 ~~p~r~I~f~~~~~EE~gl-~GS~~~~~~~~~~l~~~~~a~iNlD~ 366 (640)
T 3kas_A 322 FQPSRSIIFASWSAGDFGS-VGATEWLEGYLSSLHLKAFTYINLDK 366 (640)
T ss_dssp CCCSEEEEEEEESSGGGTS-HHHHHHHHHTTTTGGGTEEEEEECTT
T ss_pred CCCCCcEEEEEECCcccCc-hhHHHHHHhhhhhhhhCEEEEEeccc
Confidence 7899999999999999984 7999999864 22 23334455554
No 55
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=98.88 E-value=2.2e-09 Score=108.96 Aligned_cols=81 Identities=21% Similarity=0.223 Sum_probs=70.2
Q ss_pred CCceEEEEecCCCCCCCcEEEEeecccCCCCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHH---cCC
Q 018435 75 NKPLILLKWPGSNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKA---SGF 151 (356)
Q Consensus 75 ~~~nv~~~~~g~~~~~~~il~~aH~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~---~~~ 151 (356)
...||+++++|+....+.|++.+|+|+++. |+.|+.+|++++|++++.|.+ .+.
T Consensus 311 ~~~NVi~~i~G~~~~~~~vllgaH~Ds~~~-----------------------Ga~D~~sG~a~lLe~ar~l~~~~~~g~ 367 (707)
T 3fed_A 311 RIYNVVGTIRGSVEPDRYVILGGHRDSWVF-----------------------GAIDPTSGVAVLQEIARSFGKLMSKGW 367 (707)
T ss_dssp EEEEEEEEECCSSEEEEEEEEEEECCCSSS-----------------------CTTTTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEEEEEEEeCCCCCCceEEEeccccCCCC-----------------------CCccCcHHHHHHHHHHHHHHhhhhccC
Confidence 356999999998633478999999999863 578999999999999999876 567
Q ss_pred CCcccEEEEEeeccccCccccHHHHhcc
Q 018435 152 QPVRSVYLSFVPDEEIGGHDGAEKFADS 179 (356)
Q Consensus 152 ~~~~~i~~~~~~~EE~g~~~G~~~~~~~ 179 (356)
+++++|+|+++.+||.|. .|+.+++++
T Consensus 368 ~p~r~I~f~~~~~EE~Gl-~GS~~~~~~ 394 (707)
T 3fed_A 368 RPRRTIIFASWDAEEFGL-LGSTEWAEE 394 (707)
T ss_dssp CCSEEEEEEEESCGGGTS-HHHHHHHHH
T ss_pred CCCCCEEEEEeCCccccc-hhHHHHHHh
Confidence 899999999999999984 799999986
No 56
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=96.93 E-value=0.0026 Score=59.82 Aligned_cols=82 Identities=16% Similarity=0.103 Sum_probs=60.3
Q ss_pred EEEEe--cCCCCCCCcEEEEeecccCCCCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCccc
Q 018435 79 ILLKW--PGSNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRS 156 (356)
Q Consensus 79 v~~~~--~g~~~~~~~il~~aH~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~ 156 (356)
.++.+ +|+. .+.|++.+|+|+.. ++.||.+|+|++++.++.|++. +++.+
T Consensus 168 ~y~e~~ipG~t--~~~IllsaH~cHP~------------------------~ANDNaSG~a~lleLar~l~~~--~~~~t 219 (435)
T 3k9t_A 168 TYGEYYIRGEL--EEEILLTTYTCHPS------------------------MCNDNLSGVALITFIAKALSKL--KTKYS 219 (435)
T ss_dssp EEEEEEECCSS--SCEEEEEEECCCCS------------------------CTTTTHHHHHHHHHHHHHHTTS--CCSSE
T ss_pred EEEEEEecCCC--CCEEEEEEEcCCCC------------------------CCCccchHHHHHHHHHHHHhcC--CCCce
Confidence 34444 8864 38999999999721 4789999999999999999864 46899
Q ss_pred EEEEEeeccccCccccHHHHhccc--cccCCceEEEEec
Q 018435 157 VYLSFVPDEEIGGHDGAEKFADSH--VFNSLNVGIVLDE 193 (356)
Q Consensus 157 i~~~~~~~EE~g~~~G~~~~~~~~--~~~~~~~~~~~~~ 193 (356)
++|+|.+ | ..|+.+++.+. ..+.+..++++|.
T Consensus 220 ~rFvf~p----g-~iGS~~yl~~~~~~l~~i~a~lnLDm 253 (435)
T 3k9t_A 220 YRFLFAP----E-TIGSITWLSRNEDKLKNIKMGLVATC 253 (435)
T ss_dssp EEEEEEC----T-THHHHHHHHHCGGGGGGEEEEEECCS
T ss_pred EEEEEcC----c-cHHHHHHHHhChHhhhceEEEEEEEE
Confidence 9999998 2 24788887653 2334445666653
No 57
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=90.60 E-value=0.14 Score=49.24 Aligned_cols=47 Identities=23% Similarity=0.356 Sum_probs=36.7
Q ss_pred CCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccH
Q 018435 121 QGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGA 173 (356)
Q Consensus 121 ~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~ 173 (356)
++.+.++ ..||+.++.++|.|++.++ .+..+++++++..||.|+ +|+
T Consensus 252 ~~~I~s~-~lDdr~~~~~~l~al~~~~----~~~~~~~~~~~d~EEVGs-~ga 298 (461)
T 2glj_A 252 RSMVMGY-GQDDRICAYTSFEAMLEMK----NAKKTCITILVDKEEVGS-IGA 298 (461)
T ss_dssp CCEEEET-THHHHHHHHHHHHHHHTCC----SCSSCEEEEEECCGGGTC-CTT
T ss_pred CCEEEEe-cchhHHHHHHHHHHHHhhc----cCCCeEEEEEEccCCCCC-ccc
Confidence 3466666 5699999999999987653 356799999999999986 454
No 58
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=90.04 E-value=0.066 Score=51.46 Aligned_cols=49 Identities=33% Similarity=0.354 Sum_probs=34.8
Q ss_pred CCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHH
Q 018435 121 QGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAE 174 (356)
Q Consensus 121 ~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~ 174 (356)
++.+.++ ..||+.+++++|.+++.+++ .+..+++++|+..||.|+ +|+.
T Consensus 246 ~~~I~s~-~lDdr~~~~~~l~al~~~~~---~~~~~~~~~~~d~EEVGs-~ga~ 294 (458)
T 1y7e_A 246 KALIGAY-GQDDKICVFTSLESIFDLEE---TPNKTAICFLVDKEEIGS-TGST 294 (458)
T ss_dssp TCEEEES-SHHHHHHHHHHHHHHSSSSC---CCSSCEECCCBCSTTC-------
T ss_pred CCeEEEe-cCccHHHHHHHHHHHHhhhc---cCCceEEEEEEcccccCc-ccch
Confidence 4567776 56999999999999876542 356899999999999996 4554
No 59
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=88.59 E-value=0.35 Score=46.32 Aligned_cols=75 Identities=13% Similarity=-0.003 Sum_probs=50.4
Q ss_pred ChhHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceE----EEee-----cCC-CceEEEEecCCCCCCCcEEE
Q 018435 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQ----TLEF-----AKN-KPLILLKWPGSNPQLPSILL 95 (356)
Q Consensus 26 ~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~----~~~~-----~~~-~~nv~~~~~g~~~~~~~il~ 95 (356)
..+++.+..++|+++=.. ++.+..+.+++.++|++.||.-- .+.. .+. ..|+++...|+.++.+.+++
T Consensus 12 ~~~~~~~~~~~~~~Fl~~--s~t~~h~v~~~~~~l~~~Gf~~l~e~~~l~~g~k~~~~r~~~~lia~~~g~~~~~g~~ii 89 (450)
T 2glf_A 12 KKEEIEAFSKEYMEFMSK--AKTERMTVKEIKRILDESGFVPLEDFAGDPMNMTVYAVNRGKAIAAFRVVDDLKRGLNLV 89 (450)
T ss_dssp CHHHHHHHHHHHHHHHHH--CSSHHHHHHHHHHHHHTTTCEETTSCCSCTTSBCEEEESSSSCEEEEEBCSCGGGCCEEE
T ss_pred HHHHHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHCcCEEcccccCCCCCCEEEEEcCCCEEEEEEeCCCCCCCeEEE
Confidence 334555556666666554 34678899999999999998421 0000 012 36899987776323478999
Q ss_pred EeecccC
Q 018435 96 NSHTDVV 102 (356)
Q Consensus 96 ~aH~Dtv 102 (356)
.||+|.+
T Consensus 90 ~AH~Dsp 96 (450)
T 2glf_A 90 VAHIDSP 96 (450)
T ss_dssp EEECCCC
T ss_pred EEecccC
Confidence 9999999
No 60
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=87.78 E-value=6.3 Score=37.87 Aligned_cols=123 Identities=11% Similarity=0.032 Sum_probs=73.1
Q ss_pred HHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHC-CCceEEEeec----CCCc--------------eEEEEecCCCCCC
Q 018435 30 IIERFRAYLQIDTSQPNPDYTNASKFILAQAEAL-SLESQTLEFA----KNKP--------------LILLKWPGSNPQL 90 (356)
Q Consensus 30 ~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~-g~~~~~~~~~----~~~~--------------nv~~~~~g~~~~~ 90 (356)
-+.+.|+|++.|.. --.-...+++..+.++++ |++++.++.. -+.+ -++.+|.|.++..
T Consensus 182 ~~~~aRdL~n~P~n--~~~P~~~a~~a~~l~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~ 259 (497)
T 3h8g_F 182 GMAFTRDLGNLPPN--LCHPSFLAEQAKELGKAHKALKVEVLDEKKIKDLGMGAFYAVGQGSDQPPRLIVLNYQGGKKAD 259 (497)
T ss_dssp HHHHHHHHHHSCTT--TSCHHHHHHHHHHHHHHCTTEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSCTTS
T ss_pred HHHHHHHhhcCCcc--ccCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEEccCCCCCCEEEEEEECCCCCCC
Confidence 45677888888873 234578888999999999 9998876632 1222 3344554433333
Q ss_pred CcEEEEeecccCCCCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeecccc
Q 018435 91 PSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI 167 (356)
Q Consensus 91 ~~il~~aH~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 167 (356)
++|.|.|-==|...++ -+-.|-..-. +.--|++|.|+.+.+++.+.+.+. +.+|+.+....|-.
T Consensus 260 ~~i~LVGKGiTFDsGG--~slKp~~~M~---------~Mk~DM~GAAaV~g~~~a~a~l~l--~vnv~~~i~~~ENm 323 (497)
T 3h8g_F 260 KPFVLVGKGITFDTGG--ISLKPGAGMD---------EMKYDMCGAASVFGTLRAVLELQL--PVNLVCLLACAENM 323 (497)
T ss_dssp CCEEEEEEEEEEECCT--TSCCCSTTGG---------GGGGTTHHHHHHHHHHHHHHHHTC--SSEEEEEEEEEEEC
T ss_pred CcEEEEcCceEeccCC--ccCCCccchh---------hccccchHHHHHHHHHHHHHHcCC--CeEEEEEEEeeccC
Confidence 4555554322221111 0111111000 111235888999999999998864 67899988888853
No 61
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=87.57 E-value=0.15 Score=48.64 Aligned_cols=66 Identities=15% Similarity=0.155 Sum_probs=41.6
Q ss_pred HhhhcccCCCCCcChhHHHHHHHHHHHHCCCc----eEE--Eee-----cCCC-ceEEEEecCCC--CCCCcEEEEeecc
Q 018435 35 RAYLQIDTSQPNPDYTNASKFILAQAEALSLE----SQT--LEF-----AKNK-PLILLKWPGSN--PQLPSILLNSHTD 100 (356)
Q Consensus 35 ~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~----~~~--~~~-----~~~~-~nv~~~~~g~~--~~~~~il~~aH~D 100 (356)
++|+++=.. ++.+..+.+++.++|++.||. .+. +.. .+.. +|+++...|++ ++.+.+++.||+|
T Consensus 6 ~~~~~fl~~--~~t~~h~v~~~~~~l~~~Gf~~l~e~~~w~l~~g~k~~~~~~~g~lia~~~G~~~~~~~~~~ii~AH~D 83 (428)
T 2ijz_A 6 QGLIDFLKA--SPTPFHATASLARRLEAAGYRRLDERDAWHTETGGRYYVTRNDSSLIAIRLGRRSPLESGFRLVGAHTD 83 (428)
T ss_dssp --CCCSSTT--THHHHHHHCCSHHHHHHHHHHHSCC--------CCCCEECTTTTCCEEEECC--CCSTTCCEEEECBCC
T ss_pred HHHHHHHHc--CCCHHHHHHHHHHHHHHcCCeEcccccccccCCCCEEEEECCCCEEEEEEECCcCCCCCCcEEEEEcCC
Confidence 345555554 456788888889999998871 111 110 1344 78999887764 2347899999999
Q ss_pred cC
Q 018435 101 VV 102 (356)
Q Consensus 101 tv 102 (356)
++
T Consensus 84 sp 85 (428)
T 2ijz_A 84 SP 85 (428)
T ss_dssp CS
T ss_pred cC
Confidence 99
No 62
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=87.28 E-value=3.8 Score=39.46 Aligned_cols=123 Identities=10% Similarity=0.066 Sum_probs=71.4
Q ss_pred HHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEeec----CCCce--------------EEEEecCCCCCCC
Q 018435 30 IIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFA----KNKPL--------------ILLKWPGSNPQLP 91 (356)
Q Consensus 30 ~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~----~~~~n--------------v~~~~~g~~~~~~ 91 (356)
-+.+.|+|++.|.. --.-...+++..+.+++.|++++.++.. -+.+. ++.+|.|.++..+
T Consensus 199 ~~~~aRdL~n~P~n--~ltP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~~ 276 (515)
T 3kzw_A 199 SINLARDFSNMPPN--VLTPQTFAEDIVNHFKNTKVKVDVKDYDTLVSEGFGLLQAVGKGSKHKPRLVTITYNGKDKDEA 276 (515)
T ss_dssp HHHHHHHHHHSCTT--TSCHHHHHHHHHHHSTTSSCEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEESSCSSCC
T ss_pred HHHHHHHHhcCCcc--ccCHHHHHHHHHHHHHhcCcEEEEEcHHHHHHcCCCcEEEEccCCCCCCEEEEEEECCCCCCCC
Confidence 44588889998884 2345678888889999999999876632 12222 3334444333234
Q ss_pred cEEEEeecccCCCCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeecccc
Q 018435 92 SILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI 167 (356)
Q Consensus 92 ~il~~aH~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 167 (356)
+|+|.|-==|...++ ..-.|-..- .+.--|++|.|+.+.+++++.+.+. +.+|+.+....|-.
T Consensus 277 ~i~LVGKGiTFDsGG--~slKp~~~M---------~~MK~DM~GAAaVlg~~~a~a~l~l--pvnv~~~i~~~ENm 339 (515)
T 3kzw_A 277 PIALVGKGITYDSGG--YSIKTKNGM---------ATMKFDMCGAANVVGIIEAASRLQL--PVNIVGVLACAENM 339 (515)
T ss_dssp CEEEEEEEEEEECCT--TSCCCHHHH---------TTGGGGGHHHHHHHHHHHHHHHTTC--SCEEEEEEEEEEEC
T ss_pred cEEEecCceEEecCC--cCCCCccCh---------hhchhchHHHHHHHHHHHHHHHcCC--CceEEEEEEeeccC
Confidence 444444321111111 001110000 0111235888999999999998864 67898888888753
No 63
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=86.88 E-value=0.28 Score=47.14 Aligned_cols=70 Identities=19% Similarity=0.204 Sum_probs=46.7
Q ss_pred hHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCc-----------eEEEeecCCCceEEEEec-CCCC--CCCcE
Q 018435 28 DSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLE-----------SQTLEFAKNKPLILLKWP-GSNP--QLPSI 93 (356)
Q Consensus 28 ~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~-----------~~~~~~~~~~~nv~~~~~-g~~~--~~~~i 93 (356)
+++.+..++|+++=+.| +.+..+.+++.++|++.||. -+. ..+..+|+++.+. |+++ ++. -
T Consensus 16 ~~~~~~~~~~~~fl~~s--pT~~hav~~~~~~l~~~Gf~~l~e~~~l~~g~~~--~~~r~g~~i~a~~~G~~~~~~g~-~ 90 (458)
T 1y7e_A 16 NQILNFSESYKKFISKF--KTEREVTAYALDKAKKLGFINAEEKKNLMPGDKI--FYTCREKSVAFAIIGKNPIEDGM-N 90 (458)
T ss_dssp HHHHHHHHHHHHHHHHC--CSHHHHHHHHHHHHHTTTCEESTTCCCCCTTCEE--ECBCSSSCBCCEECCSSCGGGCC-E
T ss_pred HHHHHHHHHHHHHHHcC--CCHHHHHHHHHHHHHHcCCcccccccccCCCCeE--EEECCCCEEEEEEeCCCCCCCCc-E
Confidence 44555566677666653 35669999999999999975 111 1145566666654 6542 223 4
Q ss_pred EEEeecccC
Q 018435 94 LLNSHTDVV 102 (356)
Q Consensus 94 l~~aH~Dtv 102 (356)
++.||+|+.
T Consensus 91 ii~AH~Dsp 99 (458)
T 1y7e_A 91 FIVSHTDSP 99 (458)
T ss_dssp ECCCBCCCC
T ss_pred EEEEccCcC
Confidence 999999998
No 64
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=86.80 E-value=0.97 Score=43.20 Aligned_cols=45 Identities=33% Similarity=0.400 Sum_probs=34.1
Q ss_pred CeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccH
Q 018435 122 GNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGA 173 (356)
Q Consensus 122 g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~ 173 (356)
+.+.|+ ..||+.++.++|.|++.+ .+...++++++..||.|+ +|+
T Consensus 241 ~~i~~~-~lDnr~~~~~~l~al~~~-----~~~~~~~~~~~d~EEVGs-~ga 285 (450)
T 2glf_A 241 SLIGAY-GQDDRICAYTALRALLSA-----NPEKSIGVIFFDKEEIGS-DGN 285 (450)
T ss_dssp CEEEET-THHHHHHHHHHHHHHHHC-----CCSSCEEEEEESCGGGTS-CSS
T ss_pred cEEEEe-cchhhHHHHHHHHHHHhc-----CCCceEEEEEEcccccCC-cch
Confidence 345555 569999999999988765 246789999999999986 443
No 65
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=86.58 E-value=6.2 Score=37.79 Aligned_cols=123 Identities=7% Similarity=-0.069 Sum_probs=71.5
Q ss_pred HHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHC-CCceEEEeec----CCCc--------------eEEEEecCCCCC
Q 018435 29 SIIERFRAYLQIDTSQPNPDYTNASKFILAQAEAL-SLESQTLEFA----KNKP--------------LILLKWPGSNPQ 89 (356)
Q Consensus 29 ~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~-g~~~~~~~~~----~~~~--------------nv~~~~~g~~~~ 89 (356)
+-+.+.|+|++.|.. --.-...+++..+.++++ |++++.++.. -+.+ -++.+|.|.++.
T Consensus 165 ~~~~~aRdL~n~P~n--~~~P~~~a~~a~~l~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~ 242 (486)
T 3pei_A 165 CGQNYAKDLQNLPAN--ICTTDYMLNEARELTSKYATFSLDYLDQDAMAELGMGCALAVGRGSYMSNYTVCMEYKGGNEG 242 (486)
T ss_dssp HHHHHHHHHHHSCTT--TSCHHHHHHHHHHHHHTCTTEEEEEECHHHHHHTTCHHHHHHHTTCSSCCEEEEEEEECSCTT
T ss_pred HHHHHHHHHhcCChh--hcCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEeccCCCCCCEEEEEEECCCCCC
Confidence 346688889988874 234577888899999998 8998876532 1222 234445443333
Q ss_pred CCcEEEEeecccCCCCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccc
Q 018435 90 LPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEE 166 (356)
Q Consensus 90 ~~~il~~aH~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 166 (356)
.++|.|.|-==|...++ -+-.|-.. |. +---|++|.|+.+.+++.+.+.+. +.+|+.+....|-
T Consensus 243 ~~~i~LVGKGiTFDsGG--~slKp~~~-------M~--~Mk~DM~GAAaVlg~~~a~a~l~l--~vnv~~~i~~~EN 306 (486)
T 3pei_A 243 DAPIVLVGKGLVFDNGG--ICIKQAAG-------MD--SMKMDMGGVAAVMGTMKAIAMLNL--PVNVVGVMGLAEN 306 (486)
T ss_dssp SCCEEEEEEEEETEECC-----------------------EECSHHHHHHHHHHHHHHHHTC--SSEEEEEEEEEEC
T ss_pred CCcEEEEccceEEecCC--cccCCccc-------hh--hhhccchHHHHHHHHHHHHHHcCC--CcEEEEEEEeecc
Confidence 34555554322221111 01111100 00 111236888999999999998864 5789888888875
No 66
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=86.26 E-value=5.2 Score=38.48 Aligned_cols=124 Identities=6% Similarity=-0.063 Sum_probs=72.1
Q ss_pred HHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEeecC----CCce--------------EEEEecCCCCCC
Q 018435 29 SIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAK----NKPL--------------ILLKWPGSNPQL 90 (356)
Q Consensus 29 ~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~----~~~n--------------v~~~~~g~~~~~ 90 (356)
+-+.+.|+|++.|.. --.-...+++..+.++++|++++.++... +.+. +..+|.|.+...
T Consensus 205 ~~~~laRdLvn~P~N--~~tP~~lA~~a~~l~~~~gv~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~L~Y~g~~~~~ 282 (522)
T 4efd_A 205 TSTQLCQRLVDAPPN--LLTTATFTEIAQGYAKALGFDVDVICGDDLCERGYGGIYSVGKAAFEAPRLVTLLYTPKGTPV 282 (522)
T ss_dssp HHHHHHHHHHHSCTT--TSCHHHHHHHHHHHHHHHTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCSSCCS
T ss_pred HHHHHHHHHhcCCch--hCCHHHHHHHHHHHHHHcCCEEEEEeHHHHHHcCCCcEEeeccCCCCCCEEEEEEECCCCCCC
Confidence 567788999998884 23557888889999999999998766421 2333 333343332222
Q ss_pred CcEEEEeecccCCCCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeecccc
Q 018435 91 PSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI 167 (356)
Q Consensus 91 ~~il~~aH~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 167 (356)
++|.|.|-==|...++ ..-.|-.. |. +.--|++|.|+.+.+++.+.+.+. +.+|..++...|-.
T Consensus 283 ~~iaLVGKGITFDSGG--lsLKp~~~-------M~--~MK~DMgGAAaVlga~~a~a~l~l--pvnV~~vl~~~ENm 346 (522)
T 4efd_A 283 KKVSLVGKGIVYDCGG--LALKPADY-------MK--LMKHDMGGAAAVFCGFLTAVRLQQ--PVQLSCTLCLAENA 346 (522)
T ss_dssp EEEEEEEEEEETCCCC--SSSCHHHH-------HH--HGGGTTHHHHHHHHHHHHHHHHTC--SEEEEEEEEEEECC
T ss_pred CcEEEecCceEeecCC--ccCCCccc-------hh--hcccccchHHHHHHHHHHHHHcCC--CceEEEEEEEeccC
Confidence 3444443321111111 00000000 00 011235788889999999988764 67888888888753
No 67
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=85.68 E-value=10 Score=36.63 Aligned_cols=119 Identities=12% Similarity=0.089 Sum_probs=71.8
Q ss_pred HHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCC--CceEEEeec----CCCc--------------eEEEEecCCCC-C
Q 018435 31 IERFRAYLQIDTSQPNPDYTNASKFILAQAEALS--LESQTLEFA----KNKP--------------LILLKWPGSNP-Q 89 (356)
Q Consensus 31 ~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g--~~~~~~~~~----~~~~--------------nv~~~~~g~~~-~ 89 (356)
+.+.|+|++.|.. --.-...+++..+.++++| ++++.++.. -+.+ -++.+|.|.++ .
T Consensus 184 ~~laRdL~n~P~N--~~tP~~lA~~a~~la~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~Y~g~~~~~ 261 (503)
T 1gyt_A 184 IKAAKDLGNMPPN--ICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASED 261 (503)
T ss_dssp HHHHHHHHHSCTT--TCSHHHHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSSCCEEEEEEEECCCCTT
T ss_pred HHHHHHHhcCChh--hcCHHHHHHHHHHHHHhcCCceEEEEEcHHHHHHCCCCceeeecccCCCCCeEEEEEECCCCCCC
Confidence 3567888888874 2344778888999999999 998876532 1222 33445544332 2
Q ss_pred CCcEEEEeecccCCCCCCCCCCCCCCeeeCCCCeEEecCccc---chHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccc
Q 018435 90 LPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQD---MKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEE 166 (356)
Q Consensus 90 ~~~il~~aH~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D---~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 166 (356)
.++|+|.|===|...++ -+-.|-. |..+ |++|.|+.+.+++.+.+.+. +.+|+.+....|-
T Consensus 262 ~~~i~LVGKGITFDsGG--islKp~~------------~M~~MK~DM~GAAaVlg~~~aia~l~l--~vnV~~~i~~~EN 325 (503)
T 1gyt_A 262 ARPIVLVGKGLTFDSGG--ISIKPSE------------GMDEMKYDMCGAAAVYGVMRMVAELQL--PINVIGVLAGCEN 325 (503)
T ss_dssp CCCEEEEEEEEEEECCT--TSCCCST------------TGGGGGGGGHHHHHHHHHHHHHHHHTC--SSEEEEEEEEEEE
T ss_pred CCcEEEEcCceEecCCC--ccccCCc------------ChhhcccccchHHHHHHHHHHHHHcCC--CeeEEEEEEeecc
Confidence 34455554321221111 1111111 2222 35888999999999998864 6789999888885
Q ss_pred c
Q 018435 167 I 167 (356)
Q Consensus 167 ~ 167 (356)
.
T Consensus 326 m 326 (503)
T 1gyt_A 326 M 326 (503)
T ss_dssp C
T ss_pred C
Confidence 3
No 68
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=85.66 E-value=14 Score=35.30 Aligned_cols=123 Identities=10% Similarity=-0.027 Sum_probs=71.2
Q ss_pred HHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEeecC----CCce--------------EEEEecCCCCCC
Q 018435 29 SIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAK----NKPL--------------ILLKWPGSNPQL 90 (356)
Q Consensus 29 ~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~----~~~n--------------v~~~~~g~~~~~ 90 (356)
+-+.+.++|++.|.. --.-...+++..+.+++.|++++.++... +.+. +..+|.|.+. .
T Consensus 168 ~~~~~aR~L~n~P~n--~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~~~~~-~ 244 (491)
T 2hc9_A 168 ESVRETARLIDTPAN--ILTTDALVDEAVKVGNATGSKITVIRGEELLKAGFGGIYHVGKAGPTPPAFVVLSHEVPGS-T 244 (491)
T ss_dssp HHHHHHHHHHHSCTT--TSCHHHHHHHHHHHHHHTTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCTTC-S
T ss_pred HHHHHHHHHhcCCch--hCCHHHHHHHHHHHHhhcCcEEEEEeHHHHHhCCCCcEEEecccCCCCCEEEEEEeCCCCC-C
Confidence 445677888887773 23457888999999999999998766421 2222 3334433322 2
Q ss_pred CcEEEEeecccCCCCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeecccc
Q 018435 91 PSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI 167 (356)
Q Consensus 91 ~~il~~aH~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 167 (356)
++|+|.|-==|...++ ..-.|-..- .+.--|++|.|+.+.+++.+.+.+. +.+|..++...|-.
T Consensus 245 ~~i~LVGKGiTFDsGG--~slKp~~~M---------~~Mk~DM~GAAaVlg~~~a~a~l~l--~vnv~~~l~~~ENm 308 (491)
T 2hc9_A 245 EHIALVGKGVVYDTGG--LQIKTKTGM---------PNMKRDMGGAAGMLEAYSALVKHGF--SQTLHACLCIVENN 308 (491)
T ss_dssp CEEEEEEEEEEEECCT--TSCCCTTTS---------TTGGGGGHHHHHHHHHHHHHHTTTC--CSEEEEEEEEEEEC
T ss_pred CcEEEEcCceEecCCC--ccCCCCcCh---------hhccccccHHHHHHHHHHHHHHcCC--CceEEEEEEeeecC
Confidence 3444444321111111 011111100 0112236889999999999988754 67899888888753
No 69
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=83.22 E-value=12 Score=35.85 Aligned_cols=121 Identities=12% Similarity=-0.010 Sum_probs=69.9
Q ss_pred HHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCC--CceEEEeec----CCCceEE--------------EEecCCC-
Q 018435 29 SIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALS--LESQTLEFA----KNKPLIL--------------LKWPGSN- 87 (356)
Q Consensus 29 ~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g--~~~~~~~~~----~~~~nv~--------------~~~~g~~- 87 (356)
+-+.+.|+|++.|.. --.-...+++..+.++++| ++++.++.. -+.+.++ .+|.|.+
T Consensus 162 ~~~~laRdLvn~P~N--~~tP~~lA~~a~~l~~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~~ 239 (484)
T 1lam_A 162 SGQNLARRLMETPAN--EMTPTKFAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVAKGSEEPPVFLEIHYKGSPN 239 (484)
T ss_dssp HHHHHHHHHHHSCTT--TSCHHHHHHHHHHHHHHHCSSEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSSS
T ss_pred HHHHHHHHhhCCChh--hcCHHHHHHHHHHHHHHcCCceEEEEEeHHHHHHCCCCceeeeccCCCCCCeEEEEEECCCCC
Confidence 344678889988874 2345778888899999999 888876532 1333333 3333322
Q ss_pred CCCCcEEEEeecccCCCCCCCCCCCCCCeeeCCCCeEEecCccc---chHHHHHHHHHHHHHHHcCCCCcccEEEEEeec
Q 018435 88 PQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQD---MKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPD 164 (356)
Q Consensus 88 ~~~~~il~~aH~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D---~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~ 164 (356)
+..++|+|.|-==|...++ -+-.| +.|..+ |++|.|+.+.+++.+.+.+. +.+|+.+....
T Consensus 240 ~~~~~i~LVGKGITFDsGG--~slKp------------~~~M~~MK~DMgGAAaVlg~~~aia~l~l--~vnv~~~i~~~ 303 (484)
T 1lam_A 240 ASEPPLVFVGKGITFDSGG--ISIKA------------AANMDLMRADMGGAATICSAIVSAAKLDL--PINIVGLAPLC 303 (484)
T ss_dssp TTSCCEEEEECEEEEECCT--TSCCC------------STTGGGGGGTTHHHHHHHHHHHHHHHTTC--SSEEEEEEEEE
T ss_pred CCCCcEEEEecceEEcCCC--cCCcC------------ccchhhhhccchHHHHHHHHHHHHHHcCC--CeeEEEEEEee
Confidence 1112343333211111111 00111 112222 25888999999999998864 67898888888
Q ss_pred ccc
Q 018435 165 EEI 167 (356)
Q Consensus 165 EE~ 167 (356)
|-.
T Consensus 304 ENm 306 (484)
T 1lam_A 304 ENM 306 (484)
T ss_dssp EEC
T ss_pred ccC
Confidence 753
No 70
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=83.19 E-value=0.41 Score=45.55 Aligned_cols=47 Identities=17% Similarity=0.046 Sum_probs=35.5
Q ss_pred CeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeeccccCccccHHH
Q 018435 122 GNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEK 175 (356)
Q Consensus 122 g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~G~~~ 175 (356)
+.+.++ ..||+.+++++|.+++.++ ....+++++| ..||.|+ +|+.-
T Consensus 227 ~~I~s~-~lDdr~~~~~~l~al~~~~----~~~~~v~~~f-d~EEVGs-~ga~g 273 (428)
T 2ijz_A 227 EFIAGA-RLDNLLSCHAGLEALLNAE----GDENCILVCT-DHEEVGS-CSHCG 273 (428)
T ss_dssp SSSSCC-CSSCSSTTTTTTTHHHHTT----SCSSSCEEEE-CBSCTTT-TCHHH
T ss_pred CeEEee-cCccHHHHHHHHHHHHhcc----cCCceEEEEE-eccccCc-cchhh
Confidence 344444 4799999999999988764 3457888888 8999997 57654
No 71
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=82.36 E-value=14 Score=35.38 Aligned_cols=123 Identities=15% Similarity=0.086 Sum_probs=72.0
Q ss_pred HHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHC-CCceEEEeec----CCCc--------------eEEEEecCCCCC
Q 018435 29 SIIERFRAYLQIDTSQPNPDYTNASKFILAQAEAL-SLESQTLEFA----KNKP--------------LILLKWPGSNPQ 89 (356)
Q Consensus 29 ~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~-g~~~~~~~~~----~~~~--------------nv~~~~~g~~~~ 89 (356)
+-+.+.|+|++.|.. --.-...+++..+.++++ |++++.++.. -+.+ -+..+|.|.+ .
T Consensus 177 ~~~~~aRdL~n~P~n--~~~P~~~a~~a~~~~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~-~ 253 (490)
T 3jru_B 177 EGVEFARELGNLPPN--YCTPAYLADTAAAFAGKFPGAEAEILDEAQMEALGMGSLLSVARGSANRPRLIVLKWNGGG-D 253 (490)
T ss_dssp HHHHHHHHHHHSCTT--TSCHHHHHHHHHHHHTTSTTEEEEEECHHHHHHTTCHHHHHHHHTCSSCCEEEEEEEETTT-T
T ss_pred HHHHHHHHhhcCCcc--ccCHHHHHHHHHHHHhhcCCCeEEEEcHHHHHhCCCCcEEEEccCCCCCCEEEEEEEcCCC-C
Confidence 356688888888874 234577888888888887 9988876532 1222 2334444443 2
Q ss_pred CCcEEEEeecccCCCCCCCCCCCCCCeeeCCCCeEEecCcccchHHHHHHHHHHHHHHHcCCCCcccEEEEEeecccc
Q 018435 90 LPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI 167 (356)
Q Consensus 90 ~~~il~~aH~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 167 (356)
.++|.|.|-==|...++ -+-.|-..-. +.--|++|.|+.+.+++.+.+.+. +.+|+.+....|-.
T Consensus 254 ~~~i~LVGKGiTFDsGG--~slKp~~~M~---------~Mk~DM~GAAaV~g~~~a~a~l~l--~vnv~~~i~~~ENm 318 (490)
T 3jru_B 254 ARPYVLVGKGITFDTGG--VNLKTQGGIE---------EMKYDMCGGATVIGTFVATVKAEL--PINLVVVVPAVENA 318 (490)
T ss_dssp SCCEEEEECEEEEECCT--TSCCCSSCGG---------GGGGGGHHHHHHHHHHHHHHHTTC--SSEEEEEEEEEEEC
T ss_pred CCcEEEEcCeeEecCCC--ccCCCcccHh---------hCcccchHHHHHHHHHHHHHHcCC--CcEEEEEEEeeccC
Confidence 34455544321111111 1111111000 111235888999999999998864 67898888888753
No 72
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=81.69 E-value=2.5 Score=40.25 Aligned_cols=124 Identities=11% Similarity=0.057 Sum_probs=72.6
Q ss_pred HHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEeecC---CCceEEEEecCCCCCCCcEEEEeecccCCCC
Q 018435 29 SIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFAK---NKPLILLKWPGSNPQLPSILLNSHTDVVPSE 105 (356)
Q Consensus 29 ~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~---~~~nv~~~~~g~~~~~~~il~~aH~Dtvp~~ 105 (356)
+-+.+.|+|++.|.. --.-...+++..+.+++.|++++.++... +.+.+++.=+|+. ..|.++.. ++ . +.+
T Consensus 168 ~~~~laRdLvn~P~N--~~tP~~~A~~a~~la~~~g~~v~V~~~~~~~~gmg~~laVg~GS~-~pPrli~l-~y-~-~~~ 241 (482)
T 3ij3_A 168 TTIYLIRDLINTPAE--DMGPSELAQAVKHVAKEFEAKVKIIESKDLETEFPAIYAVGRAGS-RPPLLIDL-KW-G-DIK 241 (482)
T ss_dssp HHHHHHHHHHHSCGG--GSSHHHHHHHHHHHHHHHTCEEEEEEHHHHHHHCHHHHHHHTTSS-SCCEEEEE-EE-S-CTT
T ss_pred HHHHHHHHHhcCCcc--ccCHHHHHHHHHHHHHHcCCeEEEEchHHHHcCCCcEEEEccCCC-CCCEEEEE-Ee-C-CCC
Confidence 456788899998874 23457788888899999999988765321 2333333334443 22333333 33 1 111
Q ss_pred CCCCCCCCCCeeeCCCCeEEecCc---------c---cchHHHHHHHHHHHHHHHcCCCCcccEEEEEeecccc
Q 018435 106 PSKWSHHPFGAHLDSQGNIFARGS---------Q---DMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEI 167 (356)
Q Consensus 106 ~~~w~~~P~~~~~~~~g~~~GrG~---------~---D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 167 (356)
.+|... + .+|.-|=-|- . -|++|.|+.+.+++.+.+.+. +.+|..+....|-.
T Consensus 242 -----~~~i~L-V-GKGITFDsGGlslKp~~~M~~MK~DMgGAAaVlg~~~aia~l~l--pvnv~~ii~~~ENm 306 (482)
T 3ij3_A 242 -----APKVTL-V-GKGVCFDSGGLDIKTPGGMLLMKKDMGGAAHALGLARMIMLQQL--PVRLRLLIPAVENA 306 (482)
T ss_dssp -----SCEEEE-E-ECEEEEECCTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHHHTTC--SSEEEEEEEEEEEC
T ss_pred -----CCeEEE-E-ccceEeecCCccCcCccchhhccccchHHHHHHHHHHHHHHcCC--CceEEEEEEeeccC
Confidence 122211 1 2222222221 1 235888999999999998864 67899988888753
No 73
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=81.18 E-value=25 Score=33.85 Aligned_cols=122 Identities=11% Similarity=-0.031 Sum_probs=71.5
Q ss_pred HHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEeec----CCCc--------------eEEEEecCCCCCC
Q 018435 29 SIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEFA----KNKP--------------LILLKWPGSNPQL 90 (356)
Q Consensus 29 ~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~----~~~~--------------nv~~~~~g~~~~~ 90 (356)
+-+.+.|+|++.|.. --.-...++...+.++++|++++.++.. -+.+ -++.+|.|.+...
T Consensus 206 ~~v~laRdLvn~P~N--~ltP~~lA~~a~~la~~~g~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~~~~ 283 (528)
T 3kr4_A 206 FGTYYASQLIAAPSN--YCNPVSLSNAAVELAQKLNLEYKILGVKELEELKMGAYLSVGKGSMYPNKFIHLTYKSKGDVK 283 (528)
T ss_dssp HHHHHHHHHHHSCTT--TSCHHHHHHHHHHHHHHHTCEEEEECHHHHHHTTCHHHHHHGGGCSSCCEEEEEEEECSSCCC
T ss_pred HHHHHHHHHhhCCcc--ccCHHHHHHHHHHHHHHcCCeEEEeeHHHHHhcCCCeEEeeccCCCCCCEEEEEEEcCCCCCC
Confidence 346688889988874 2344677788888888899999876632 1222 3444555443333
Q ss_pred CcEEEEeecccCCCCCCCCCCCCCCeeeCCCCeEEecC--ccc---chHHHHHHHHHHHHHHHcCCCCcccEEEEEeecc
Q 018435 91 PSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARG--SQD---MKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDE 165 (356)
Q Consensus 91 ~~il~~aH~Dtvp~~~~~w~~~P~~~~~~~~g~~~GrG--~~D---~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~E 165 (356)
++|.|.|-==|...++ ..-.|- .| ..+ |.+|.|+.+.+++++.+.+ ..+.+|..+....|
T Consensus 284 ~~iaLVGKGITFDsGG--~slKp~------------~g~~M~~MK~DM~GAAaVlg~~~aia~l~-~~~vnv~~vi~~~E 348 (528)
T 3kr4_A 284 KKIALVGKGITFDSGG--YNLKAA------------PGSMIDLMKFDMSGCAAVLGCAYCVGTLK-PENVEIHFLSAVCE 348 (528)
T ss_dssp EEEEEEEEEEEEECCT--TSCSCS------------TTCCGGGGGGGGHHHHHHHHHHHHHHHHC-CSSEEEEEEEEEEE
T ss_pred CcEEEecCceEeecCC--cccCCC------------CCcCHHHhhcCcchHHHHHHHHHHHHhcC-CCCceEEEEEEeec
Confidence 4555555422222211 111111 12 112 3578888999999988875 22467888888777
Q ss_pred cc
Q 018435 166 EI 167 (356)
Q Consensus 166 E~ 167 (356)
-.
T Consensus 349 Nm 350 (528)
T 3kr4_A 349 NM 350 (528)
T ss_dssp EC
T ss_pred cC
Confidence 53
No 74
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=79.83 E-value=18 Score=36.54 Aligned_cols=44 Identities=14% Similarity=0.159 Sum_probs=38.2
Q ss_pred ChhHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCc-eEE
Q 018435 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLE-SQT 69 (356)
Q Consensus 26 ~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~-~~~ 69 (356)
..+.+.+.|+.|.++|-.+.+.++.++++|+.+.++++|++ ++.
T Consensus 23 ~~~~i~~~l~~lt~~ph~aGt~~~~~~a~yi~~~~~~~Gl~~v~~ 67 (707)
T 3fed_A 23 KAENIKSFLRSFTKLPHLAGTEQNFLLAKKIQTQWKKFGLDSAKL 67 (707)
T ss_dssp CHHHHHHHHHHHSSSCCCTTSHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHHHhcCCCcCCCHhHHHHHHHHHHHHHHcCCCceeE
Confidence 44689999999999998876778899999999999999998 654
No 75
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=79.74 E-value=1.9 Score=41.55 Aligned_cols=48 Identities=8% Similarity=-0.099 Sum_probs=39.1
Q ss_pred cCCeEEEEEEEecCCCCCHHHHHHHHHHHhccCCCCceEEEEeecccccC
Q 018435 288 QPSEAEAGFDIRVPPTTDAESLERRIVEEWAPASRNMTFEVVINSLSLLH 337 (356)
Q Consensus 288 ip~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 337 (356)
-++++++.+++|+++..+.+++.+++++.+. ..++++++....+||..
T Consensus 358 ~~~~~~~~~~~R~~~~~~~~~i~~~l~~~~~--~~g~~~~~~~~~p~~~~ 405 (490)
T 3mru_A 358 EENKVTVLCLIRSLIDSGRSQVEGMLQSVAE--LAGAQIEFSGAYPGWKP 405 (490)
T ss_dssp ETTEEEEEEEEEESSHHHHHHHHHHHHHHHH--HTTCEEEEEEEECCBCC
T ss_pred eCCEEEEEEEcCCCCchHHHHHHHHHHHHHH--HcCCeEEecCCCCCCCC
Confidence 4788999999999999999999999987664 35778877766666654
No 76
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=77.52 E-value=2 Score=41.43 Aligned_cols=77 Identities=16% Similarity=0.145 Sum_probs=47.4
Q ss_pred CCChhHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEE----EeecC--------CCceEEEEecCCC--CC
Q 018435 24 AKSDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQT----LEFAK--------NKPLILLKWPGSN--PQ 89 (356)
Q Consensus 24 ~~~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~----~~~~~--------~~~nv~~~~~g~~--~~ 89 (356)
....+++.+..++|+++=.. ++.+..+.+.+.++|++.||.--. .+... +...+++..-|.+ +.
T Consensus 29 ~~~~~~~~~~a~~~~~Fl~~--spT~~hav~~~~~~L~~aGF~~L~e~~~w~l~~ggkyyv~rn~ssliAf~vg~~~~~~ 106 (496)
T 3vat_A 29 RARKEAVQAAARELLKFVNR--SPSPFHAVAECRSRLLQAGFHELKETESWDIKPESKYFLTRNSSTIIAFAVGGQYVPG 106 (496)
T ss_dssp CHHHHHHHHHHHHHHHHHHT--CSSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTT
T ss_pred hhHHHHHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHCcCeEccccCCcccCCCCEEEEECCCcEEEEEEeCCCCCCC
Confidence 33455666677777777665 456789999999999999985210 00001 1224555432332 23
Q ss_pred CCcEEEEeecccC
Q 018435 90 LPSILLNSHTDVV 102 (356)
Q Consensus 90 ~~~il~~aH~Dtv 102 (356)
...-++.||.|+-
T Consensus 107 ~G~~ivgaHtDSP 119 (496)
T 3vat_A 107 NGFSLIGAHTDSP 119 (496)
T ss_dssp CCEEEEEEECCCC
T ss_pred CCeEEEEEeccCC
Confidence 3467899999997
No 77
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=68.80 E-value=7.9 Score=36.37 Aligned_cols=47 Identities=13% Similarity=0.214 Sum_probs=38.9
Q ss_pred ChhHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEee
Q 018435 26 SDDSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEF 72 (356)
Q Consensus 26 ~~~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~ 72 (356)
..+++.+.++.|.+.+-.+.+.++.++++|+.+.|+++|+++...++
T Consensus 14 ~~~~~~~~l~~Ls~~~R~~Gs~g~~~a~~yi~~~~~~~Gl~~~~q~~ 60 (421)
T 2ek8_A 14 DAENMYNTIQFLSQAPRVAGSPEELKAVRYIEQQFKSYGYHVEVQPF 60 (421)
T ss_dssp CHHHHHHHHHHHTTSCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHCCCceEEEEE
Confidence 45788899999998877666778999999999999999997765443
No 78
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=61.44 E-value=1.3 Score=42.38 Aligned_cols=72 Identities=13% Similarity=0.141 Sum_probs=42.8
Q ss_pred hHHHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEEEee--------------cCCCce-EEEEecCCCC-CCC
Q 018435 28 DSIIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQTLEF--------------AKNKPL-ILLKWPGSNP-QLP 91 (356)
Q Consensus 28 ~~~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~--------------~~~~~n-v~~~~~g~~~-~~~ 91 (356)
+++.+..++|+++=..|| .+..+.+++.++|++.||+ +..+. .+..+| +++...|+++ ..+
T Consensus 18 ~~~~~~~~~~~~Fl~~sp--t~~hav~~~~~~l~~sGfe-~l~e~~~~~w~l~~g~~~~~~~~g~slia~~~G~~~~~~g 94 (461)
T 2glj_A 18 KEVFALGDRFKNFISNCK--TERECVTELIKTAEKSGYR-NIEDILAKGETLKEGDKVYANNRGKGLIMFLIGKEPLYTG 94 (461)
T ss_dssp HHHHHTTHHHHHHHHHHH--CCSSTHHHHHHHSCCSSCC-CTTCCCSTTTTCCTTCCCEEEETTTEEEECCCCSSCGGGC
T ss_pred HHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHcCCh-hHHHHhhHhhccCCCCEEEEEcCCCEEEEEEeCCcCccCC
Confidence 344444444444444322 2347788888999999986 21111 012345 8887767642 124
Q ss_pred cEEEEeecccC
Q 018435 92 SILLNSHTDVV 102 (356)
Q Consensus 92 ~il~~aH~Dtv 102 (356)
.+++.||+|++
T Consensus 95 ~~ii~AH~Dsp 105 (461)
T 2glj_A 95 FKILGAHIDSP 105 (461)
T ss_dssp CEEEEEECCCC
T ss_pred ceEEEEecCcC
Confidence 69999999998
No 79
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=60.81 E-value=11 Score=25.63 Aligned_cols=41 Identities=22% Similarity=0.323 Sum_probs=32.6
Q ss_pred CCeEEEEEEEecCCCCCHHHHHHHHHHHhc-cCCCCceEEEE
Q 018435 289 PSEAEAGFDIRVPPTTDAESLERRIVEEWA-PASRNMTFEVV 329 (356)
Q Consensus 289 p~~~~~~~diR~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~ 329 (356)
-+--++.+|+|.......+...++++++++ +...++.+++.
T Consensus 14 rdgqeieidirvstgkeleralqelekalaragarnvqitis 55 (96)
T 2jvf_A 14 RDGQEIEIDIRVSTGKELERALQELEKALARAGARNVQITIS 55 (96)
T ss_dssp ETTEEEEEEEECCSSSHHHHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred eCCeEEEEEEEEcccHHHHHHHHHHHHHHHhccccceEEEEE
Confidence 455688999999999999999999998887 35566666553
No 80
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=47.89 E-value=21 Score=33.79 Aligned_cols=44 Identities=7% Similarity=0.033 Sum_probs=32.8
Q ss_pred hHHHHHHHhhh-cc-cCCCCCcChhHHHHHHHHHHHHCCC-ceEEEe
Q 018435 28 DSIIERFRAYL-QI-DTSQPNPDYTNASKFILAQAEALSL-ESQTLE 71 (356)
Q Consensus 28 ~~~~~~l~~l~-~i-~s~s~~~~e~~~~~~l~~~l~~~g~-~~~~~~ 71 (356)
+...+.+++|. .+ +-.+.+.++.++++|+.+.|+++|+ ++...+
T Consensus 21 ~~~~~~l~~l~~~~G~R~~GS~g~~~a~~~i~~~l~~~G~~~v~~q~ 67 (444)
T 3iib_A 21 SLGYDIVESLTVEVGPRLAGSEQDKVAVDWAIAKLQSLGFDRVYKEP 67 (444)
T ss_dssp CHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred cHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHcCCCceEeee
Confidence 45677777777 44 2334577999999999999999999 555433
No 81
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=39.98 E-value=63 Score=30.98 Aligned_cols=46 Identities=22% Similarity=0.208 Sum_probs=31.7
Q ss_pred CeEEecCcccchHHHHHHHHHHHHHHHcC----CCCcccEEEEEeeccccCc
Q 018435 122 GNIFARGSQDMKCVGMQYLEAIRRLKASG----FQPVRSVYLSFVPDEEIGG 169 (356)
Q Consensus 122 g~~~GrG~~D~k~~~a~~l~a~~~l~~~~----~~~~~~i~~~~~~~EE~g~ 169 (356)
+.+.|+ ..||+.++.+++.|++.+++.. .... ..+++++..||.|+
T Consensus 277 e~I~s~-~lDnr~~~~~~leaL~~~~~~~~~~~~~~~-~~v~v~~dqEEVGs 326 (496)
T 3vat_A 277 EFIFAP-RLDNLHSCFCALQALIDSCSAPASLAADPH-VRMIALYDNEEVGS 326 (496)
T ss_dssp CEEEET-THHHHHHHHHHHHHHHHHTTSHHHHHHCCS-EEEEEEESCGGGTS
T ss_pred ceEEee-ccccHHHHHHHHHHHHhhhccccccccCCC-cEEEEEEccCCcCC
Confidence 445555 5799999999999988775310 0122 34488899999986
No 82
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=36.47 E-value=83 Score=30.72 Aligned_cols=71 Identities=15% Similarity=0.046 Sum_probs=42.8
Q ss_pred HHHHHHhhhcccCCCCCcChhHHHHHHHHHHHHCCCceEE----EeecC--------CCceEEEEecCCC--CCCC-cEE
Q 018435 30 IIERFRAYLQIDTSQPNPDYTNASKFILAQAEALSLESQT----LEFAK--------NKPLILLKWPGSN--PQLP-SIL 94 (356)
Q Consensus 30 ~~~~l~~l~~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~----~~~~~--------~~~nv~~~~~g~~--~~~~-~il 94 (356)
..+..++|+++=.. ++.+.-+.+.+.++|++.||.--. ..... +..++++..-|.+ +... .-+
T Consensus 6 ~~~~a~~~~~Fl~~--spT~~HaV~~~~~~L~~aGF~~L~E~~~W~l~~Ggkyy~~rn~ssiiAf~vG~~~~~~~G~~~I 83 (571)
T 4eme_A 6 AREYAQDALKFIQR--SGSNFLACKNLKERLENNGFINLSEGETWNLNKNEGYVLCKENRNICGFFVGKNFNIDTGSILI 83 (571)
T ss_dssp HHHHHHHHHHHHHH--CCSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTTCCEEE
T ss_pred HHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHCcCEEccccCCcccCCCCEEEEEcCCCEEEEEEeCCcCCCCCCcEEE
Confidence 33444445544443 346788999999999999984210 00111 1235666554654 3334 679
Q ss_pred EEeecccC
Q 018435 95 LNSHTDVV 102 (356)
Q Consensus 95 ~~aH~Dtv 102 (356)
+.||.|+-
T Consensus 84 vgAHtDSP 91 (571)
T 4eme_A 84 SIGHIDSC 91 (571)
T ss_dssp EEEECCCC
T ss_pred EEEeccCC
Confidence 99999986
No 83
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=22.56 E-value=64 Score=32.09 Aligned_cols=40 Identities=8% Similarity=0.126 Sum_probs=32.3
Q ss_pred hHHHHHHHhhhc---ccCCCCCcChhHHHHHHHHHHHHCCCce
Q 018435 28 DSIIERFRAYLQ---IDTSQPNPDYTNASKFILAQAEALSLES 67 (356)
Q Consensus 28 ~~~~~~l~~l~~---i~s~s~~~~e~~~~~~l~~~l~~~g~~~ 67 (356)
+++.+.|+.|.+ -|-.+.+.++.++++||.+.|+++|++.
T Consensus 18 ~~i~~~L~~Lssd~~~~R~aGT~g~~~aa~yI~~~f~~~Gl~~ 60 (640)
T 3kas_A 18 TDFTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLSK 60 (640)
T ss_dssp CCHHHHHHHTTSTTTSSCCTTSHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCcc
Confidence 357788888887 3555557789999999999999999974
No 84
>1im3_D Cytomegalovirus protein US2; beta sheet, beta sandwhich, immunoglobulin (IG) fold, immunoglobulin (IG)-like domain, protein complex; 2.20A {Human herpesvirus 5} SCOP: b.1.18.5
Probab=20.29 E-value=41 Score=23.17 Aligned_cols=13 Identities=46% Similarity=0.907 Sum_probs=11.0
Q ss_pred eeeCCCCeEEecCc
Q 018435 116 AHLDSQGNIFARGS 129 (356)
Q Consensus 116 ~~~~~~g~~~GrG~ 129 (356)
+.+ ++|.+||||+
T Consensus 10 c~i-~ng~~f~rgs 22 (95)
T 1im3_D 10 CYI-DNGKLFARGS 22 (95)
T ss_dssp EEE-CSSEEEEEEE
T ss_pred EEE-eCCeEEeece
Confidence 456 8999999997
Done!