Query 018437
Match_columns 356
No_of_seqs 221 out of 2451
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 09:00:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018437.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018437hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0076 GadB Glutamate decarbo 100.0 1.9E-53 4E-58 412.5 29.4 317 29-355 30-355 (460)
2 TIGR01788 Glu-decarb-GAD gluta 100.0 7.9E-52 1.7E-56 400.1 33.2 337 18-355 3-339 (431)
3 PF00282 Pyridoxal_deC: Pyrido 100.0 7.5E-52 1.6E-56 394.6 25.5 314 30-355 10-348 (373)
4 PLN02590 probable tyrosine dec 100.0 1.5E-50 3.3E-55 398.2 28.8 329 13-355 85-441 (539)
5 PLN02880 tyrosine decarboxylas 100.0 9.7E-48 2.1E-52 378.0 26.1 323 19-355 43-393 (490)
6 PLN02263 serine decarboxylase 100.0 1.5E-46 3.3E-51 361.4 28.9 285 40-355 76-375 (470)
7 KOG1383 Glutamate decarboxylas 100.0 2.7E-47 5.9E-52 353.4 22.2 336 5-355 29-367 (491)
8 PLN03032 serine decarboxylase; 100.0 1.8E-45 3.9E-50 349.1 28.4 268 62-355 28-308 (374)
9 TIGR03799 NOD_PanD_pyr putativ 100.0 3.7E-45 8E-50 360.5 27.5 316 26-355 56-413 (522)
10 TIGR03811 tyr_de_CO2_Ent tyros 100.0 6.9E-45 1.5E-49 361.3 28.1 314 31-355 54-469 (608)
11 PRK02769 histidine decarboxyla 100.0 1.9E-44 4.1E-49 344.3 28.8 276 52-355 18-305 (380)
12 KOG0629 Glutamate decarboxylas 100.0 3.9E-42 8.5E-47 315.0 16.6 328 12-355 56-407 (510)
13 KOG0628 Aromatic-L-amino-acid/ 100.0 1.9E-36 4E-41 280.6 21.6 328 14-354 29-386 (511)
14 PRK13520 L-tyrosine decarboxyl 100.0 1.9E-33 4.1E-38 269.4 27.9 295 37-355 2-296 (371)
15 COG1104 NifS Cysteine sulfinat 100.0 4.2E-33 9.1E-38 259.1 25.5 239 64-335 9-254 (386)
16 cd06450 DOPA_deC_like DOPA dec 100.0 3.6E-33 7.8E-38 264.9 20.9 251 61-355 3-261 (345)
17 TIGR03812 tyr_de_CO2_Arch tyro 100.0 2.8E-31 6.1E-36 254.7 28.6 295 38-355 1-301 (373)
18 COG0520 csdA Selenocysteine ly 100.0 1.5E-30 3.3E-35 249.8 25.7 269 55-355 21-313 (405)
19 PLN02651 cysteine desulfurase 100.0 5.8E-29 1.3E-33 238.0 25.1 257 65-355 8-272 (364)
20 KOG1549 Cysteine desulfurase N 100.0 1.1E-28 2.4E-33 230.4 21.8 247 60-337 47-299 (428)
21 PRK04366 glycine dehydrogenase 100.0 3.2E-27 7E-32 233.1 27.9 296 30-355 44-362 (481)
22 TIGR03235 DNA_S_dndA cysteine 100.0 8.6E-27 1.9E-31 222.1 26.0 260 65-355 7-274 (353)
23 TIGR03402 FeS_nifS cysteine de 100.0 2.4E-26 5.2E-31 221.1 25.6 253 65-354 8-267 (379)
24 PRK05367 glycine dehydrogenase 100.0 1.2E-26 2.5E-31 242.1 24.6 288 37-355 478-787 (954)
25 TIGR02006 IscS cysteine desulf 100.0 2.3E-26 5E-31 223.0 25.1 257 64-354 11-275 (402)
26 TIGR03531 selenium_SpcS O-phos 100.0 1.2E-26 2.6E-31 224.0 22.9 295 24-355 22-338 (444)
27 TIGR01977 am_tr_V_EF2568 cyste 100.0 2.6E-26 5.7E-31 220.4 25.0 258 67-355 11-283 (376)
28 TIGR00461 gcvP glycine dehydro 100.0 6.4E-26 1.4E-30 233.0 28.6 289 38-355 467-779 (939)
29 TIGR03392 FeS_syn_CsdA cystein 99.9 6E-26 1.3E-30 219.8 23.9 263 60-355 20-306 (398)
30 PRK09295 bifunctional cysteine 99.9 3E-26 6.6E-31 222.4 21.9 264 59-355 26-314 (406)
31 PRK10874 cysteine sulfinate de 99.9 1.1E-25 2.5E-30 218.0 25.1 261 60-354 23-308 (401)
32 cd06453 SufS_like Cysteine des 99.9 2.9E-25 6.4E-30 213.0 24.0 258 66-354 9-287 (373)
33 TIGR03403 nifS_epsilon cystein 99.9 8.1E-25 1.8E-29 210.7 25.4 255 65-354 8-271 (382)
34 PF00266 Aminotran_5: Aminotra 99.9 3.1E-25 6.7E-30 212.8 22.1 261 64-355 7-288 (371)
35 TIGR01979 sufS cysteine desulf 99.9 8E-25 1.7E-29 212.2 25.1 262 60-354 22-307 (403)
36 PRK14012 cysteine desulfurase; 99.9 1E-24 2.2E-29 211.6 25.3 256 65-354 12-277 (404)
37 PLN02855 Bifunctional selenocy 99.9 4.5E-25 9.8E-30 215.4 22.8 263 60-355 36-322 (424)
38 PRK00451 glycine dehydrogenase 99.9 8.1E-25 1.8E-29 215.0 23.7 305 11-355 21-365 (447)
39 PRK02948 cysteine desulfurase; 99.9 3.1E-24 6.8E-29 206.6 26.3 254 65-354 9-269 (381)
40 PLN02409 serine--glyoxylate am 99.9 1.4E-24 3.1E-29 210.2 19.1 254 64-355 16-286 (401)
41 TIGR01976 am_tr_V_VC1184 cyste 99.9 4.9E-24 1.1E-28 206.2 22.4 264 60-354 21-306 (397)
42 cd06451 AGAT_like Alanine-glyo 99.9 3.4E-24 7.3E-29 204.4 19.8 251 67-355 9-272 (356)
43 PLN02414 glycine dehydrogenase 99.9 2.7E-23 5.8E-28 216.2 26.0 286 37-355 504-819 (993)
44 TIGR01814 kynureninase kynuren 99.9 1.7E-23 3.6E-28 203.2 21.8 258 65-355 36-322 (406)
45 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 1.9E-23 4.1E-28 201.5 22.0 191 67-292 31-235 (387)
46 cd00613 GDC-P Glycine cleavage 99.9 7.1E-23 1.5E-27 198.1 24.8 279 41-355 3-321 (398)
47 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 2.1E-22 4.6E-27 192.5 21.9 192 67-292 12-216 (361)
48 TIGR02326 transamin_PhnW 2-ami 99.9 1.1E-22 2.4E-27 194.6 18.9 234 91-355 31-277 (363)
49 COG0436 Aspartate/tyrosine/aro 99.9 3.8E-22 8.3E-27 191.8 22.3 214 56-293 29-253 (393)
50 cd00615 Orn_deC_like Ornithine 99.9 9E-23 1.9E-27 189.7 14.1 221 97-354 61-288 (294)
51 PRK12566 glycine dehydrogenase 99.9 2.7E-21 5.8E-26 198.0 24.0 288 36-355 478-788 (954)
52 PLN02724 Molybdenum cofactor s 99.9 1.2E-21 2.5E-26 204.4 19.5 269 60-355 38-353 (805)
53 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 1.8E-21 3.9E-26 185.2 19.1 252 65-354 7-271 (355)
54 COG0075 Serine-pyruvate aminot 99.9 2.4E-21 5.2E-26 181.9 19.3 256 64-355 12-278 (383)
55 PRK13479 2-aminoethylphosphona 99.9 3.6E-21 7.9E-26 184.4 20.3 252 65-354 13-277 (368)
56 PTZ00094 serine hydroxymethylt 99.9 6E-21 1.3E-25 187.5 22.0 277 39-355 19-316 (452)
57 KOG0257 Kynurenine aminotransf 99.9 7E-20 1.5E-24 169.6 20.0 225 41-290 18-259 (420)
58 COG1003 GcvP Glycine cleavage 99.8 1.9E-19 4E-24 167.0 22.2 304 24-355 32-358 (496)
59 TIGR02539 SepCysS Sep-tRNA:Cys 99.8 2.7E-19 5.9E-24 171.6 23.5 164 96-292 52-223 (370)
60 PF02347 GDC-P: Glycine cleava 99.8 2.9E-19 6.2E-24 170.2 23.2 302 12-355 21-358 (429)
61 PRK13238 tnaA tryptophanase/L- 99.8 9E-20 2E-24 178.7 19.5 193 71-295 58-277 (460)
62 TIGR01437 selA_rel uncharacter 99.8 1.9E-19 4.2E-24 172.0 20.5 191 67-291 24-222 (363)
63 cd00609 AAT_like Aspartate ami 99.8 3.3E-19 7.2E-24 168.6 21.0 252 69-354 13-271 (350)
64 PRK03080 phosphoserine aminotr 99.8 5.9E-20 1.3E-24 176.6 14.7 248 64-355 19-285 (378)
65 cd00378 SHMT Serine-glycine hy 99.8 4.5E-19 9.8E-24 171.9 20.3 220 39-292 4-238 (402)
66 PRK08361 aspartate aminotransf 99.8 4.4E-19 9.6E-24 171.4 19.7 210 58-291 36-252 (391)
67 PLN00145 tyrosine/nicotianamin 99.8 1.5E-18 3.4E-23 169.4 23.6 215 54-292 51-278 (430)
68 PRK00011 glyA serine hydroxyme 99.8 5.7E-19 1.2E-23 172.0 20.2 273 40-355 11-296 (416)
69 cd06502 TA_like Low-specificit 99.8 7.7E-20 1.7E-24 172.9 13.8 188 62-284 4-203 (338)
70 PLN02656 tyrosine transaminase 99.8 1.3E-18 2.7E-23 169.2 22.2 217 53-292 29-257 (409)
71 PRK11658 UDP-4-amino-4-deoxy-L 99.8 5.6E-19 1.2E-23 169.9 19.1 185 70-295 14-199 (379)
72 PRK06108 aspartate aminotransf 99.8 7.2E-19 1.6E-23 169.2 19.5 212 58-292 27-248 (382)
73 cd00611 PSAT_like Phosphoserin 99.8 8.1E-20 1.8E-24 174.2 12.2 254 64-355 6-272 (355)
74 PLN00175 aminotransferase fami 99.8 1.4E-18 2.9E-23 169.1 20.8 213 56-291 55-274 (413)
75 PRK08960 hypothetical protein; 99.8 1.6E-18 3.5E-23 167.3 20.7 211 57-292 34-250 (387)
76 PRK12414 putative aminotransfe 99.8 3.1E-18 6.7E-23 165.1 22.3 212 58-291 32-250 (384)
77 PLN00143 tyrosine/nicotianamin 99.8 5.6E-18 1.2E-22 164.7 24.1 233 38-293 14-259 (409)
78 TIGR01822 2am3keto_CoA 2-amino 99.8 1.7E-18 3.7E-23 167.3 20.3 188 69-291 54-253 (393)
79 PRK08912 hypothetical protein; 99.8 2.9E-18 6.2E-23 165.5 21.1 213 58-292 29-248 (387)
80 PRK08363 alanine aminotransfer 99.8 2.9E-18 6.2E-23 166.1 21.0 213 53-291 28-252 (398)
81 PRK13355 bifunctional HTH-doma 99.8 3.8E-18 8.2E-23 170.5 22.5 213 53-291 144-368 (517)
82 cd01494 AAT_I Aspartate aminot 99.8 9.2E-19 2E-23 148.2 14.9 165 98-291 3-170 (170)
83 PLN02721 threonine aldolase 99.8 8.8E-19 1.9E-23 166.7 16.4 199 61-295 11-224 (353)
84 PRK09082 methionine aminotrans 99.8 2.2E-18 4.7E-23 166.3 18.4 210 58-291 33-251 (386)
85 PRK06207 aspartate aminotransf 99.8 7.5E-18 1.6E-22 163.5 22.1 212 58-291 42-266 (405)
86 PRK05957 aspartate aminotransf 99.8 7.4E-18 1.6E-22 162.8 21.5 212 58-292 30-249 (389)
87 PRK07337 aminotransferase; Val 99.8 8E-18 1.7E-22 162.5 21.6 209 58-292 33-248 (388)
88 TIGR03537 DapC succinyldiamino 99.8 7E-18 1.5E-22 160.6 20.7 199 69-290 15-220 (350)
89 PRK07324 transaminase; Validat 99.8 3.4E-18 7.3E-23 164.2 18.4 205 54-290 25-236 (373)
90 cd06454 KBL_like KBL_like; thi 99.8 4E-18 8.6E-23 161.9 18.7 189 69-291 17-214 (349)
91 KOG0259 Tyrosine aminotransfer 99.8 1.4E-17 2.9E-22 152.2 20.7 214 56-294 62-289 (447)
92 TIGR01265 tyr_nico_aTase tyros 99.8 2.5E-17 5.3E-22 159.9 24.1 214 54-292 30-257 (403)
93 PRK07681 aspartate aminotransf 99.8 2.7E-17 5.9E-22 159.4 23.5 211 56-291 33-254 (399)
94 PLN02271 serine hydroxymethylt 99.8 3.4E-17 7.4E-22 159.6 23.8 260 67-355 159-448 (586)
95 PRK05367 glycine dehydrogenase 99.8 2.2E-17 4.7E-22 172.9 23.7 300 12-355 32-367 (954)
96 PRK07179 hypothetical protein; 99.8 9.5E-18 2.1E-22 163.0 19.7 189 68-292 69-264 (407)
97 PRK05764 aspartate aminotransf 99.8 2.9E-17 6.3E-22 158.8 23.0 212 56-291 32-253 (393)
98 PRK05942 aspartate aminotransf 99.8 1.9E-17 4.2E-22 160.1 21.5 212 57-291 37-258 (394)
99 PRK07777 aminotransferase; Val 99.8 2.2E-17 4.7E-22 159.4 21.4 211 58-291 27-247 (387)
100 PTZ00433 tyrosine aminotransfe 99.8 1.7E-17 3.7E-22 161.4 20.8 215 53-292 31-265 (412)
101 PLN02414 glycine dehydrogenase 99.8 2.2E-17 4.7E-22 172.3 22.8 301 12-355 57-395 (993)
102 PRK08861 cystathionine gamma-s 99.8 3.7E-18 8E-23 163.9 15.8 160 90-293 52-217 (388)
103 KOG2862 Alanine-glyoxylate ami 99.8 1.7E-17 3.7E-22 147.9 18.5 249 75-355 31-295 (385)
104 PLN03226 serine hydroxymethylt 99.8 3.2E-17 6.9E-22 161.2 22.5 286 39-355 19-327 (475)
105 PLN02187 rooty/superroot1 99.8 3.9E-17 8.5E-22 160.8 22.6 213 56-293 67-293 (462)
106 PRK07550 hypothetical protein; 99.8 5.4E-17 1.2E-21 156.6 23.1 215 56-292 30-252 (386)
107 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 1.7E-18 3.7E-23 165.0 12.2 218 97-352 68-308 (417)
108 PRK06836 aspartate aminotransf 99.8 5.3E-17 1.2E-21 157.1 22.8 217 58-292 36-260 (394)
109 PRK08134 O-acetylhomoserine am 99.8 2.2E-17 4.7E-22 160.8 19.9 157 91-291 64-225 (433)
110 TIGR03540 DapC_direct LL-diami 99.8 7E-17 1.5E-21 155.6 23.3 210 58-291 32-252 (383)
111 PRK06290 aspartate aminotransf 99.8 5E-17 1.1E-21 157.9 22.4 214 54-290 43-265 (410)
112 PRK09147 succinyldiaminopimela 99.8 4.4E-17 9.5E-22 157.8 21.7 217 54-291 28-260 (396)
113 PRK05355 3-phosphoserine/phosp 99.8 3.3E-18 7.2E-23 163.2 13.4 255 62-355 8-275 (360)
114 PRK07682 hypothetical protein; 99.8 2.2E-17 4.8E-22 158.8 19.2 211 58-291 23-241 (378)
115 PRK07683 aminotransferase A; V 99.8 5E-17 1.1E-21 156.9 21.7 211 58-291 31-248 (387)
116 cd00617 Tnase_like Tryptophana 99.8 3.1E-17 6.8E-22 159.0 20.2 193 71-295 33-252 (431)
117 PLN02368 alanine transaminase 99.8 3.6E-17 7.8E-22 158.3 20.4 201 68-290 82-306 (407)
118 cd00616 AHBA_syn 3-amino-5-hyd 99.8 1.6E-17 3.6E-22 157.9 17.8 161 99-294 22-184 (352)
119 COG0399 WecE Predicted pyridox 99.8 5.4E-17 1.2E-21 152.8 20.9 188 70-296 15-202 (374)
120 PRK07309 aromatic amino acid a 99.8 7.5E-17 1.6E-21 155.9 22.1 210 58-291 33-252 (391)
121 TIGR01364 serC_1 phosphoserine 99.8 7.6E-18 1.6E-22 160.0 14.6 244 69-355 4-264 (349)
122 TIGR03538 DapC_gpp succinyldia 99.8 9.2E-17 2E-21 155.4 22.4 218 54-291 27-259 (393)
123 PTZ00377 alanine aminotransfer 99.8 8.5E-17 1.8E-21 159.5 22.6 199 70-290 91-314 (481)
124 PRK08068 transaminase; Reviewe 99.8 9E-17 2E-21 155.2 22.2 210 58-291 35-255 (389)
125 PRK09276 LL-diaminopimelate am 99.8 1.5E-16 3.2E-21 153.5 23.6 211 57-291 33-254 (385)
126 PRK06939 2-amino-3-ketobutyrat 99.8 3.7E-17 8.1E-22 158.0 19.2 204 54-291 41-257 (397)
127 TIGR01329 cysta_beta_ly_E cyst 99.8 1.4E-17 3E-22 160.0 15.6 156 98-294 50-211 (378)
128 TIGR01141 hisC histidinol-phos 99.8 2.9E-17 6.3E-22 156.0 17.4 192 67-291 32-225 (346)
129 PRK06225 aspartate aminotransf 99.8 5.1E-17 1.1E-21 156.4 19.3 203 58-292 31-241 (380)
130 PRK07366 succinyldiaminopimela 99.8 1.2E-16 2.5E-21 154.4 21.7 214 53-290 28-253 (388)
131 PRK08776 cystathionine gamma-s 99.8 1.9E-17 4.2E-22 160.1 16.1 156 99-294 64-225 (405)
132 TIGR03588 PseC UDP-4-keto-6-de 99.8 7E-17 1.5E-21 155.5 19.4 187 70-295 10-202 (380)
133 PRK13580 serine hydroxymethylt 99.7 8.5E-17 1.8E-21 156.1 19.7 283 40-355 35-352 (493)
134 PRK06348 aspartate aminotransf 99.7 1E-16 2.3E-21 154.5 20.4 210 58-291 32-249 (384)
135 PRK08133 O-succinylhomoserine 99.7 2.4E-17 5.2E-22 158.9 15.9 154 98-291 64-223 (390)
136 TIGR01264 tyr_amTase_E tyrosin 99.7 3.7E-16 8E-21 151.6 24.2 209 58-292 34-256 (401)
137 TIGR01366 serC_3 phosphoserine 99.7 1.5E-17 3.2E-22 158.9 14.1 250 64-355 10-274 (361)
138 PRK07504 O-succinylhomoserine 99.7 4.5E-17 9.7E-22 157.4 17.3 162 90-295 64-230 (398)
139 PRK09265 aminotransferase AlaT 99.7 1.9E-16 4E-21 153.8 21.7 209 55-291 33-255 (404)
140 PRK08045 cystathionine gamma-s 99.7 2.7E-17 5.8E-22 158.2 15.6 155 99-293 56-216 (386)
141 PRK07050 cystathionine beta-ly 99.7 3.7E-17 8E-22 157.7 15.9 156 99-294 69-230 (394)
142 PRK14807 histidinol-phosphate 99.7 2.2E-16 4.8E-21 150.4 20.9 189 68-290 36-227 (351)
143 PRK07811 cystathionine gamma-s 99.7 5.1E-17 1.1E-21 156.6 16.5 160 91-294 61-226 (388)
144 PLN02231 alanine transaminase 99.7 3.4E-16 7.3E-21 156.2 22.7 185 84-291 161-367 (534)
145 TIGR01324 cysta_beta_ly_B cyst 99.7 4.7E-17 1E-21 156.0 15.7 158 90-291 49-212 (377)
146 PRK08064 cystathionine beta-ly 99.7 4.1E-17 8.9E-22 157.3 14.8 155 99-294 58-218 (390)
147 PRK05958 8-amino-7-oxononanoat 99.7 2.6E-16 5.6E-21 151.4 20.2 190 68-291 54-251 (385)
148 PRK08574 cystathionine gamma-s 99.7 5.2E-17 1.1E-21 156.2 15.2 160 90-294 52-217 (385)
149 PRK04311 selenocysteine syntha 99.7 3.6E-16 7.9E-21 152.8 20.8 194 66-292 96-307 (464)
150 cd00614 CGS_like CGS_like: Cys 99.7 7E-17 1.5E-21 154.8 15.4 159 90-292 39-203 (369)
151 PRK09028 cystathionine beta-ly 99.7 8.6E-17 1.9E-21 154.4 15.9 150 90-283 60-213 (394)
152 PRK06855 aminotransferase; Val 99.7 5.5E-16 1.2E-20 151.7 21.6 210 56-291 33-258 (433)
153 PLN02509 cystathionine beta-ly 99.7 9.4E-17 2E-21 156.9 16.0 157 96-293 134-296 (464)
154 TIGR02080 O_succ_thio_ly O-suc 99.7 9.4E-17 2E-21 154.3 15.8 156 99-294 55-216 (382)
155 TIGR02379 ECA_wecE TDP-4-keto- 99.7 2.6E-16 5.6E-21 151.0 18.4 189 70-296 11-200 (376)
156 PRK08249 cystathionine gamma-s 99.7 1.5E-16 3.2E-21 153.7 16.8 159 90-293 63-227 (398)
157 PRK09105 putative aminotransfe 99.7 1.8E-16 4E-21 152.0 17.3 191 67-291 56-248 (370)
158 TIGR00474 selA seryl-tRNA(sec) 99.7 6.8E-16 1.5E-20 150.5 21.4 195 66-292 91-302 (454)
159 PRK13034 serine hydroxymethylt 99.7 5.4E-16 1.2E-20 150.8 20.6 220 40-293 14-246 (416)
160 PRK06107 aspartate aminotransf 99.7 5.6E-16 1.2E-20 150.3 20.5 210 58-291 36-256 (402)
161 TIGR00461 gcvP glycine dehydro 99.7 2E-15 4.3E-20 156.1 25.2 301 12-355 20-355 (939)
162 PRK08636 aspartate aminotransf 99.7 1.2E-15 2.5E-20 148.1 22.4 208 58-290 36-262 (403)
163 TIGR01328 met_gam_lyase methio 99.7 1.6E-16 3.5E-21 153.2 16.1 157 90-290 58-220 (391)
164 PRK07568 aspartate aminotransf 99.7 1.3E-15 2.8E-20 147.5 22.2 210 58-293 33-252 (397)
165 PRK09148 aminotransferase; Val 99.7 1.7E-15 3.8E-20 147.0 22.9 213 54-290 29-252 (405)
166 PRK07810 O-succinylhomoserine 99.7 3.2E-16 7E-21 151.6 17.7 159 90-292 69-233 (403)
167 PRK08114 cystathionine beta-ly 99.7 1.1E-16 2.4E-21 153.3 14.1 160 90-291 61-226 (395)
168 TIGR00858 bioF 8-amino-7-oxono 99.7 7.5E-16 1.6E-20 146.7 19.7 190 68-291 31-229 (360)
169 PRK07503 methionine gamma-lyas 99.7 2.9E-16 6.4E-21 152.0 16.4 159 90-293 64-228 (403)
170 TIGR01825 gly_Cac_T_rel pyrido 99.7 8.1E-16 1.8E-20 148.2 19.3 202 54-290 32-244 (385)
171 TIGR01325 O_suc_HS_sulf O-succ 99.7 3.1E-16 6.6E-21 150.9 16.3 153 99-291 58-216 (380)
172 PRK09275 aspartate aminotransf 99.7 5.7E-16 1.2E-20 153.1 18.5 216 59-293 104-328 (527)
173 PRK04870 histidinol-phosphate 99.7 3.6E-16 7.8E-21 149.2 16.4 191 67-291 39-232 (356)
174 PRK08056 threonine-phosphate d 99.7 8.6E-16 1.9E-20 146.7 18.8 200 58-292 23-228 (356)
175 PRK06234 methionine gamma-lyas 99.7 3.2E-16 7E-21 151.6 16.0 162 89-292 62-229 (400)
176 PRK03158 histidinol-phosphate 99.7 4E-16 8.6E-21 149.1 16.3 192 68-291 43-237 (359)
177 PRK07671 cystathionine beta-ly 99.7 3.2E-16 7E-21 150.4 15.1 155 99-294 54-214 (377)
178 PLN02242 methionine gamma-lyas 99.7 2.1E-16 4.5E-21 153.4 13.8 157 90-291 75-239 (418)
179 PRK05937 8-amino-7-oxononanoat 99.7 1.2E-15 2.5E-20 146.5 18.8 166 92-290 53-224 (370)
180 PF01041 DegT_DnrJ_EryC1: DegT 99.7 9.1E-16 2E-20 146.8 17.8 186 70-295 5-192 (363)
181 PRK05387 histidinol-phosphate 99.7 6.7E-16 1.5E-20 147.1 16.8 196 59-291 28-225 (353)
182 PRK03317 histidinol-phosphate 99.7 6.6E-16 1.4E-20 148.1 16.7 198 67-291 39-243 (368)
183 PRK05968 hypothetical protein; 99.7 8.7E-16 1.9E-20 148.1 17.5 156 91-291 63-224 (389)
184 PRK05939 hypothetical protein; 99.7 2.1E-15 4.6E-20 145.6 20.1 150 90-283 46-198 (397)
185 PRK00950 histidinol-phosphate 99.7 9.7E-16 2.1E-20 146.4 17.7 188 68-291 48-238 (361)
186 PRK05613 O-acetylhomoserine am 99.7 6.5E-16 1.4E-20 150.4 16.7 155 98-291 72-231 (437)
187 PRK06767 methionine gamma-lyas 99.7 6.9E-16 1.5E-20 148.7 16.6 159 90-292 60-224 (386)
188 PRK08248 O-acetylhomoserine am 99.7 9.6E-16 2.1E-20 149.3 17.7 159 90-292 63-226 (431)
189 PRK07812 O-acetylhomoserine am 99.7 7.1E-16 1.5E-20 150.1 16.5 160 90-292 68-232 (436)
190 PRK01533 histidinol-phosphate 99.7 6.6E-16 1.4E-20 147.9 16.0 201 58-290 32-236 (366)
191 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.7 2.7E-15 5.8E-20 144.2 20.2 182 72-293 13-196 (375)
192 TIGR03801 asp_4_decarbox aspar 99.7 2.3E-15 5E-20 148.6 19.8 216 60-292 99-326 (521)
193 PLN02450 1-aminocyclopropane-1 99.7 1.1E-15 2.3E-20 150.9 17.4 184 87-292 82-288 (468)
194 PLN03026 histidinol-phosphate 99.7 2.1E-15 4.6E-20 145.2 19.0 198 58-291 55-255 (380)
195 COG1168 MalY Bifunctional PLP- 99.7 3E-15 6.5E-20 137.7 18.9 202 69-295 40-251 (388)
196 COG0403 GcvP Glycine cleavage 99.7 1E-14 2.2E-19 135.8 22.5 303 12-355 29-372 (450)
197 PRK05994 O-acetylhomoserine am 99.7 1.4E-15 3.1E-20 148.2 17.8 157 91-291 63-224 (427)
198 PRK07269 cystathionine gamma-s 99.7 5.7E-16 1.2E-20 147.9 14.6 162 90-294 53-216 (364)
199 PRK06176 cystathionine gamma-s 99.7 5.8E-16 1.2E-20 148.8 14.6 158 91-293 50-213 (380)
200 PRK15407 lipopolysaccharide bi 99.7 4.3E-15 9.4E-20 145.1 20.9 176 91-295 63-238 (438)
201 PRK06460 hypothetical protein; 99.7 8.4E-16 1.8E-20 147.6 15.3 157 90-290 44-206 (376)
202 COG0112 GlyA Glycine/serine hy 99.7 2.1E-15 4.6E-20 139.2 17.0 273 40-355 12-297 (413)
203 PRK09257 aromatic amino acid a 99.7 1.9E-15 4.1E-20 146.4 17.6 201 70-290 47-260 (396)
204 PRK05839 hypothetical protein; 99.7 9.7E-15 2.1E-19 140.3 22.2 211 54-291 23-247 (374)
205 PRK15481 transcriptional regul 99.7 3.2E-15 6.9E-20 146.4 19.0 191 70-291 101-296 (431)
206 PRK08247 cystathionine gamma-s 99.7 7.1E-16 1.5E-20 147.7 14.1 157 91-292 52-214 (366)
207 PRK15029 arginine decarboxylas 99.7 1.5E-15 3.2E-20 154.8 16.8 169 97-293 207-402 (755)
208 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 2.2E-15 4.9E-20 146.6 17.4 154 99-292 61-219 (418)
209 PRK07590 L,L-diaminopimelate a 99.7 5.6E-15 1.2E-19 143.7 20.2 221 39-291 17-264 (409)
210 PRK08175 aminotransferase; Val 99.7 1.5E-14 3.2E-19 140.0 22.8 207 58-290 32-251 (395)
211 PRK06084 O-acetylhomoserine am 99.7 5.4E-15 1.2E-19 143.9 19.6 150 90-283 57-210 (425)
212 PRK02610 histidinol-phosphate 99.7 4.2E-15 9E-20 142.9 18.5 197 67-291 41-249 (374)
213 PRK01688 histidinol-phosphate 99.7 6.1E-16 1.3E-20 147.4 12.4 166 98-291 60-228 (351)
214 PLN02376 1-aminocyclopropane-1 99.7 2.9E-15 6.2E-20 148.6 17.3 180 87-293 90-296 (496)
215 PF00464 SHMT: Serine hydroxym 99.7 4.1E-15 8.8E-20 141.4 17.2 257 67-355 31-313 (399)
216 PRK03321 putative aminotransfe 99.7 1.9E-15 4.1E-20 144.0 15.0 192 68-291 36-231 (352)
217 PRK02731 histidinol-phosphate 99.7 4E-15 8.6E-20 142.6 17.2 193 68-292 46-241 (367)
218 COG2008 GLY1 Threonine aldolas 99.7 1.4E-15 3E-20 139.4 13.1 189 67-290 11-212 (342)
219 TIGR03576 pyridox_MJ0158 pyrid 99.6 2.3E-14 4.9E-19 136.0 21.8 204 40-292 8-218 (346)
220 PTZ00376 aspartate aminotransf 99.6 2.1E-15 4.5E-20 146.5 15.0 186 85-289 66-264 (404)
221 PRK04635 histidinol-phosphate 99.6 1.2E-15 2.5E-20 145.7 12.5 163 99-291 64-229 (354)
222 PRK05166 histidinol-phosphate 99.6 4.7E-15 1E-19 142.3 16.7 195 68-293 50-248 (371)
223 PRK13392 5-aminolevulinate syn 99.6 1.1E-14 2.3E-19 141.7 19.0 193 65-290 58-259 (410)
224 PF01212 Beta_elim_lyase: Beta 99.6 1.4E-15 3E-20 140.3 11.8 190 68-292 7-209 (290)
225 TIGR02618 tyr_phenol_ly tyrosi 99.6 6.2E-15 1.4E-19 141.3 16.7 179 86-297 66-272 (450)
226 COG1103 Archaea-specific pyrid 99.6 1.1E-14 2.5E-19 127.7 16.7 199 101-334 67-273 (382)
227 PRK06358 threonine-phosphate d 99.6 1.8E-14 3.9E-19 137.5 19.7 189 68-292 33-229 (354)
228 PRK03967 histidinol-phosphate 99.6 1.1E-14 2.4E-19 138.0 17.8 186 67-291 31-219 (337)
229 PRK10534 L-threonine aldolase; 99.6 2.9E-15 6.3E-20 141.6 13.7 191 67-295 11-213 (333)
230 PRK07582 cystathionine gamma-l 99.6 3.2E-15 6.9E-20 143.1 13.9 156 90-293 50-211 (366)
231 PRK05967 cystathionine beta-ly 99.6 5.2E-15 1.1E-19 142.0 15.0 154 97-290 66-225 (395)
232 PRK06702 O-acetylhomoserine am 99.6 7.6E-15 1.7E-19 142.3 16.3 151 90-283 60-214 (432)
233 TIGR01821 5aminolev_synth 5-am 99.6 3.3E-14 7.1E-19 138.0 20.1 192 67-291 59-259 (402)
234 PRK14809 histidinol-phosphate 99.6 2.7E-14 5.9E-19 136.4 18.9 202 58-292 33-238 (357)
235 PRK07908 hypothetical protein; 99.6 3.3E-14 7.2E-19 135.3 19.3 181 68-291 36-219 (349)
236 PF00155 Aminotran_1_2: Aminot 99.6 4.6E-14 9.9E-19 134.8 20.3 199 70-291 21-236 (363)
237 PLN02607 1-aminocyclopropane-1 99.6 1.7E-14 3.6E-19 141.5 17.6 182 89-293 93-296 (447)
238 PLN02672 methionine S-methyltr 99.6 1.4E-14 3.1E-19 151.9 16.8 213 54-293 696-927 (1082)
239 PRK08354 putative aminotransfe 99.6 3.9E-14 8.5E-19 132.7 17.7 171 69-290 22-196 (311)
240 PLN02397 aspartate transaminas 99.6 2.7E-14 5.9E-19 139.3 17.2 184 86-289 86-282 (423)
241 PRK12566 glycine dehydrogenase 99.6 1.2E-13 2.6E-18 142.3 21.9 296 12-355 35-369 (954)
242 TIGR01365 serC_2 phosphoserine 99.6 9.8E-15 2.1E-19 139.1 12.9 244 69-355 15-276 (374)
243 PRK08637 hypothetical protein; 99.6 4.3E-14 9.3E-19 136.5 17.5 198 70-291 23-242 (388)
244 PRK08153 histidinol-phosphate 99.6 5.1E-14 1.1E-18 135.1 17.8 191 67-291 45-238 (369)
245 PRK07865 N-succinyldiaminopime 99.6 1E-13 2.2E-18 132.7 19.1 200 53-290 25-237 (364)
246 COG0079 HisC Histidinol-phosph 99.6 6.2E-14 1.3E-18 133.0 16.8 190 67-290 35-226 (356)
247 PRK09064 5-aminolevulinate syn 99.6 1.9E-13 4.2E-18 132.8 20.3 192 67-291 60-260 (407)
248 COG2873 MET17 O-acetylhomoseri 99.6 9.7E-14 2.1E-18 127.1 16.6 223 89-355 60-305 (426)
249 PRK06434 cystathionine gamma-l 99.6 2.7E-14 5.8E-19 136.9 13.2 158 89-294 62-226 (384)
250 PRK07392 threonine-phosphate d 99.6 1.5E-13 3.1E-18 131.5 18.3 190 67-291 35-231 (360)
251 PRK13237 tyrosine phenol-lyase 99.6 1.1E-13 2.3E-18 133.3 17.1 178 86-296 73-278 (460)
252 PLN02452 phosphoserine transam 99.6 5.5E-14 1.2E-18 133.9 15.0 251 64-355 14-279 (365)
253 TIGR03539 DapC_actino succinyl 99.6 3.3E-13 7.1E-18 128.9 20.3 213 39-290 6-231 (357)
254 TIGR03542 DAPAT_plant LL-diami 99.6 3.8E-13 8.3E-18 130.5 20.6 202 57-292 35-262 (402)
255 KOG1368 Threonine aldolase [Am 99.6 1.8E-14 3.9E-19 127.9 10.1 241 67-354 33-291 (384)
256 PRK13393 5-aminolevulinate syn 99.6 4.1E-13 8.9E-18 130.5 20.5 190 68-290 60-258 (406)
257 PRK04781 histidinol-phosphate 99.6 1E-13 2.2E-18 132.8 15.8 166 99-291 63-235 (364)
258 cd00610 OAT_like Acetyl ornith 99.6 2.3E-13 4.9E-18 132.4 18.5 197 68-291 53-274 (413)
259 PRK13578 ornithine decarboxyla 99.6 4.4E-14 9.6E-19 142.8 13.7 166 98-293 177-371 (720)
260 PRK09440 avtA valine--pyruvate 99.5 3.9E-13 8.4E-18 131.0 19.9 213 58-291 33-263 (416)
261 PLN02822 serine palmitoyltrans 99.5 3E-13 6.5E-18 133.8 19.3 210 53-291 107-328 (481)
262 PRK14808 histidinol-phosphate 99.5 2.1E-13 4.5E-18 129.1 17.3 192 59-292 23-218 (335)
263 PRK07505 hypothetical protein; 99.5 4.8E-13 1E-17 129.8 19.2 239 67-342 60-306 (402)
264 TIGR01140 L_thr_O3P_dcar L-thr 99.5 8.7E-14 1.9E-18 131.5 13.3 155 99-292 51-210 (330)
265 PLN02483 serine palmitoyltrans 99.5 6.8E-13 1.5E-17 131.6 19.0 165 93-291 144-323 (489)
266 PLN03227 serine palmitoyltrans 99.5 6.4E-13 1.4E-17 128.4 17.6 193 68-291 13-222 (392)
267 PRK06425 histidinol-phosphate 99.5 2.4E-13 5.3E-18 128.5 14.2 160 99-291 44-208 (332)
268 PRK12462 phosphoserine aminotr 99.5 4.1E-13 8.9E-18 126.9 15.6 250 64-355 11-278 (364)
269 PRK07049 methionine gamma-lyas 99.5 7.8E-13 1.7E-17 128.9 17.9 164 90-290 82-256 (427)
270 PRK15400 lysine decarboxylase 99.5 1.7E-13 3.6E-18 138.5 13.0 165 98-292 198-382 (714)
271 PRK15399 lysine decarboxylase 99.5 7.1E-13 1.5E-17 134.0 16.7 165 98-292 198-382 (713)
272 PF01053 Cys_Met_Meta_PP: Cys/ 99.5 1.1E-12 2.4E-17 125.7 15.7 159 90-292 54-219 (386)
273 TIGR00707 argD acetylornithine 99.5 7.3E-12 1.6E-16 120.4 21.4 198 69-292 45-254 (379)
274 PRK00854 rocD ornithine--oxo-a 99.4 2E-11 4.2E-16 118.5 22.2 195 68-292 58-272 (401)
275 PRK03244 argD acetylornithine 99.4 1.2E-11 2.7E-16 119.8 20.6 191 69-293 61-268 (398)
276 COG3844 Kynureninase [Amino ac 99.4 2.7E-12 5.9E-17 115.6 14.5 227 92-354 73-318 (407)
277 PRK05664 threonine-phosphate d 99.4 6.5E-12 1.4E-16 118.7 15.5 150 99-291 53-207 (330)
278 COG1167 ARO8 Transcriptional r 99.4 2E-11 4.2E-16 120.2 18.9 197 70-291 107-313 (459)
279 COG1982 LdcC Arginine/lysine/o 99.4 9.1E-12 2E-16 121.5 13.4 166 99-293 74-248 (557)
280 PRK01278 argD acetylornithine 99.4 1.1E-10 2.3E-15 112.9 20.7 200 68-292 48-259 (389)
281 PLN02955 8-amino-7-oxononanoat 99.3 8.3E-11 1.8E-15 114.5 19.1 203 68-292 117-332 (476)
282 PRK02627 acetylornithine amino 99.3 2.2E-10 4.9E-15 110.8 22.0 198 69-292 57-266 (396)
283 PRK04073 rocD ornithine--oxo-a 99.3 1.8E-10 3.8E-15 111.7 20.9 198 67-292 56-271 (396)
284 KOG0256 1-aminocyclopropane-1- 99.3 3E-11 6.4E-16 112.0 14.4 186 90-295 120-322 (471)
285 PTZ00125 ornithine aminotransf 99.3 1.3E-10 2.9E-15 112.6 19.2 203 68-292 48-263 (400)
286 KOG2040 Glycine dehydrogenase 99.3 6.6E-11 1.4E-15 114.9 15.9 249 78-355 564-830 (1001)
287 COG0156 BioF 7-keto-8-aminopel 99.3 1.7E-10 3.7E-15 109.8 18.1 221 69-336 55-290 (388)
288 PF05889 SLA_LP_auto_ag: Solub 99.3 2.9E-11 6.3E-16 113.2 12.5 225 95-354 56-287 (389)
289 PRK06959 putative threonine-ph 99.3 5.6E-11 1.2E-15 112.8 14.3 153 98-291 56-213 (339)
290 KOG0053 Cystathionine beta-lya 99.3 5.6E-11 1.2E-15 111.8 13.4 157 91-291 77-239 (409)
291 COG0626 MetC Cystathionine bet 99.3 9.5E-11 2.1E-15 111.4 14.3 159 90-292 62-227 (396)
292 KOG0258 Alanine aminotransfera 99.2 3E-10 6.5E-15 104.7 14.9 149 83-252 105-262 (475)
293 TIGR02617 tnaA_trp_ase tryptop 99.2 3.8E-10 8.3E-15 107.8 15.8 192 68-293 55-281 (467)
294 KOG2467 Glycine/serine hydroxy 99.2 9.9E-10 2.1E-14 100.6 17.3 258 67-354 51-333 (477)
295 TIGR01885 Orn_aminotrans ornit 99.2 4.7E-09 1E-13 101.9 22.5 196 68-291 54-270 (401)
296 PRK02936 argD acetylornithine 99.2 2.5E-09 5.4E-14 102.9 20.3 192 68-291 46-250 (377)
297 PRK03715 argD acetylornithine 99.2 6.2E-09 1.3E-13 100.7 22.5 200 69-293 54-264 (395)
298 TIGR03246 arg_catab_astC succi 99.2 9E-09 2E-13 99.8 22.5 195 68-292 52-263 (397)
299 PLN02624 ornithine-delta-amino 99.2 8.6E-09 1.9E-13 102.0 22.7 197 68-292 92-309 (474)
300 COG4992 ArgD Ornithine/acetylo 99.1 2.1E-09 4.6E-14 101.0 16.5 192 67-291 58-267 (404)
301 COG3977 Alanine-alpha-ketoisov 99.1 1.3E-09 2.9E-14 97.4 14.0 230 39-292 16-264 (417)
302 COG1921 SelA Selenocysteine sy 99.1 9.1E-09 2E-13 96.7 18.1 186 68-292 39-237 (395)
303 KOG0634 Aromatic amino acid am 99.1 3.7E-09 8.1E-14 98.9 15.2 229 86-348 95-355 (472)
304 PRK05093 argD bifunctional N-s 99.1 4.3E-08 9.4E-13 95.2 23.3 193 68-292 57-268 (403)
305 PRK04013 argD acetylornithine/ 99.0 3.1E-08 6.8E-13 94.6 20.5 227 68-346 41-284 (364)
306 PRK04260 acetylornithine amino 99.0 4.8E-08 1E-12 93.9 21.8 189 69-292 46-249 (375)
307 PRK12381 bifunctional succinyl 99.0 4.2E-08 9E-13 95.4 21.2 198 69-292 57-267 (406)
308 TIGR00713 hemL glutamate-1-sem 99.0 2.1E-08 4.5E-13 98.1 18.7 192 67-292 64-278 (423)
309 PF03841 SelA: L-seryl-tRNA se 98.9 1.1E-09 2.4E-14 102.0 5.7 162 99-292 51-227 (367)
310 PF06838 Met_gamma_lyase: Meth 98.9 6.1E-08 1.3E-12 89.7 16.4 169 92-295 55-241 (403)
311 PRK00062 glutamate-1-semialdeh 98.9 7E-08 1.5E-12 94.4 17.5 189 67-292 66-280 (426)
312 PRK09792 4-aminobutyrate trans 98.9 3.8E-07 8.3E-12 89.1 21.7 198 67-292 56-282 (421)
313 PLN02760 4-aminobutyrate:pyruv 98.9 4.4E-07 9.6E-12 90.3 21.8 205 67-292 105-345 (504)
314 PRK05964 adenosylmethionine--8 98.9 6.3E-07 1.4E-11 87.7 22.4 204 67-292 58-285 (423)
315 PRK04612 argD acetylornithine 98.9 5.7E-07 1.2E-11 87.4 21.7 202 67-292 56-271 (408)
316 PRK08360 4-aminobutyrate amino 98.8 9.6E-07 2.1E-11 86.8 22.7 198 67-292 57-288 (443)
317 PRK05769 4-aminobutyrate amino 98.8 8.2E-07 1.8E-11 87.2 22.1 198 67-293 70-306 (441)
318 PRK06541 hypothetical protein; 98.8 8.6E-07 1.9E-11 87.5 22.0 205 67-293 68-307 (460)
319 PRK08117 4-aminobutyrate amino 98.8 5.3E-07 1.2E-11 88.4 20.3 197 67-292 59-291 (433)
320 COG0001 HemL Glutamate-1-semia 98.8 3.4E-07 7.4E-12 87.2 18.0 188 67-292 69-283 (432)
321 KOG3843 Predicted serine hydro 98.8 2.9E-09 6.2E-14 93.8 2.9 227 94-353 56-288 (432)
322 PRK12403 putative aminotransfe 98.8 1.2E-06 2.7E-11 86.4 21.7 204 68-292 71-307 (460)
323 PLN00144 acetylornithine trans 98.8 1.2E-06 2.5E-11 84.6 21.1 197 67-292 31-251 (382)
324 KOG0633 Histidinol phosphate a 98.8 1.2E-08 2.6E-13 89.7 6.5 115 118-250 87-203 (375)
325 PRK12389 glutamate-1-semialdeh 98.8 7.4E-07 1.6E-11 87.3 19.7 194 67-292 69-283 (428)
326 PRK09264 diaminobutyrate--2-ox 98.8 1.6E-06 3.5E-11 84.8 21.9 203 67-293 55-284 (425)
327 TIGR02407 ectoine_ectB diamino 98.8 2.5E-06 5.5E-11 83.1 22.8 203 67-293 51-280 (412)
328 PRK06058 4-aminobutyrate amino 98.7 1.4E-06 3.1E-11 85.6 20.9 198 67-292 72-303 (443)
329 PRK11522 putrescine--2-oxoglut 98.7 2E-06 4.4E-11 84.7 21.3 194 67-292 98-316 (459)
330 PRK07482 hypothetical protein; 98.7 1.7E-06 3.7E-11 85.5 20.4 206 67-292 66-305 (461)
331 PRK08088 4-aminobutyrate amino 98.7 6.4E-07 1.4E-11 87.6 17.1 198 68-292 58-283 (425)
332 PRK09221 beta alanine--pyruvat 98.7 1.4E-06 3E-11 85.7 19.2 202 67-292 65-303 (445)
333 PRK13360 omega amino acid--pyr 98.7 3.7E-06 8.1E-11 82.6 22.2 205 67-292 62-300 (442)
334 PLN02482 glutamate-1-semialdeh 98.7 1.3E-06 2.9E-11 86.3 19.0 189 68-292 116-329 (474)
335 TIGR00700 GABAtrnsam 4-aminobu 98.7 2.3E-06 5.1E-11 83.6 20.1 198 67-292 49-281 (420)
336 PRK06105 aminotransferase; Pro 98.7 3.2E-06 7E-11 83.5 21.2 204 67-292 64-303 (460)
337 TIGR03372 putres_am_tran putre 98.7 3.3E-06 7.1E-11 82.8 21.1 193 67-292 91-309 (442)
338 PRK06062 hypothetical protein; 98.7 3.1E-06 6.8E-11 83.3 21.0 197 67-292 69-299 (451)
339 PRK07495 4-aminobutyrate amino 98.7 7.7E-06 1.7E-10 80.0 23.2 198 67-292 56-282 (425)
340 PF00202 Aminotran_3: Aminotra 98.7 4.9E-06 1.1E-10 79.0 21.2 204 68-293 33-262 (339)
341 COG0160 GabT 4-aminobutyrate a 98.7 4.6E-06 9.9E-11 80.7 21.0 232 67-339 72-341 (447)
342 PRK08593 4-aminobutyrate amino 98.7 3.8E-06 8.1E-11 82.7 20.8 197 67-292 58-291 (445)
343 PRK05965 hypothetical protein; 98.6 6.3E-06 1.4E-10 81.4 22.1 207 67-293 62-301 (459)
344 COG1448 TyrB Aspartate/tyrosin 98.6 3.8E-07 8.2E-12 84.8 12.5 211 46-279 16-248 (396)
345 PRK07481 hypothetical protein; 98.6 8.3E-06 1.8E-10 80.3 22.6 206 67-292 58-298 (449)
346 PRK06777 4-aminobutyrate amino 98.6 3.7E-06 8E-11 82.2 20.0 197 67-292 56-282 (421)
347 TIGR00709 dat 2,4-diaminobutyr 98.6 8.6E-06 1.9E-10 80.1 21.8 202 67-293 55-291 (442)
348 KOG1360 5-aminolevulinate synt 98.6 1E-06 2.3E-11 81.9 14.1 179 69-281 187-377 (570)
349 PRK07036 hypothetical protein; 98.6 9E-06 2E-10 80.4 21.7 205 67-292 67-306 (466)
350 COG3033 TnaA Tryptophanase [Am 98.6 2.5E-06 5.4E-11 78.6 15.0 236 89-354 77-343 (471)
351 COG1932 SerC Phosphoserine ami 98.6 3.6E-06 7.8E-11 78.0 16.1 223 90-355 45-280 (365)
352 PRK07046 aminotransferase; Val 98.5 8.7E-06 1.9E-10 80.2 19.5 188 68-293 92-301 (453)
353 PRK07480 putative aminotransfe 98.5 1.6E-05 3.5E-10 78.4 21.3 206 67-292 66-304 (456)
354 PRK06943 adenosylmethionine--8 98.5 8.9E-06 1.9E-10 80.2 19.3 206 67-293 70-308 (453)
355 PRK07678 aminotransferase; Val 98.5 3.4E-05 7.3E-10 76.1 23.0 201 67-293 63-299 (451)
356 KOG1359 Glycine C-acetyltransf 98.5 1.3E-06 2.7E-11 78.4 11.4 184 68-288 82-273 (417)
357 PRK06916 adenosylmethionine--8 98.5 1.5E-05 3.4E-10 78.6 20.3 205 67-292 72-309 (460)
358 PRK06209 glutamate-1-semialdeh 98.5 7.6E-06 1.6E-10 80.2 17.9 190 67-292 64-266 (431)
359 PRK07030 adenosylmethionine--8 98.5 1.6E-05 3.5E-10 78.6 19.8 204 67-292 63-300 (466)
360 PRK05630 adenosylmethionine--8 98.5 1.8E-05 3.9E-10 77.3 19.6 204 67-292 56-286 (422)
361 PRK06082 4-aminobutyrate amino 98.5 4.2E-05 9.1E-10 75.6 22.3 195 68-292 88-313 (459)
362 KOG3846 L-kynurenine hydrolase 98.5 3.2E-06 6.9E-11 76.3 12.9 226 99-354 115-368 (465)
363 PRK06938 diaminobutyrate--2-ox 98.5 3.6E-05 7.7E-10 76.1 21.7 200 67-293 79-316 (464)
364 PRK05639 4-aminobutyrate amino 98.4 1.9E-05 4.1E-10 77.9 19.1 197 67-293 69-307 (457)
365 PRK06918 4-aminobutyrate amino 98.4 4E-05 8.7E-10 75.6 21.4 197 67-292 70-303 (451)
366 PRK06917 hypothetical protein; 98.4 3.8E-05 8.3E-10 75.6 21.0 204 67-292 47-285 (447)
367 PRK07986 adenosylmethionine--8 98.4 1.7E-05 3.6E-10 77.7 18.3 203 67-292 59-290 (428)
368 PRK00615 glutamate-1-semialdeh 98.4 3.3E-05 7.1E-10 75.7 19.8 194 67-292 69-284 (433)
369 PRK07483 hypothetical protein; 98.4 7E-05 1.5E-09 73.7 21.8 204 67-293 46-286 (443)
370 PRK06149 hypothetical protein; 98.4 4.8E-05 1E-09 81.8 21.4 197 68-293 600-830 (972)
371 TIGR00508 bioA adenosylmethion 98.4 5.1E-05 1.1E-09 74.3 19.9 204 67-292 61-293 (427)
372 PRK08742 adenosylmethionine--8 98.4 6.8E-05 1.5E-09 74.2 20.6 209 67-292 80-322 (472)
373 KOG1357 Serine palmitoyltransf 98.3 5.1E-06 1.1E-10 78.6 11.7 221 92-355 179-418 (519)
374 PRK06931 diaminobutyrate--2-ox 98.3 9.2E-05 2E-09 73.1 20.7 200 67-292 74-309 (459)
375 KOG0630 Predicted pyridoxal-de 98.3 2.4E-06 5.1E-11 81.4 8.8 183 154-354 231-426 (838)
376 PRK06173 adenosylmethionine--8 98.3 5.6E-05 1.2E-09 74.0 18.0 204 67-292 60-292 (429)
377 PRK06148 hypothetical protein; 98.3 9.7E-05 2.1E-09 79.7 21.1 196 68-292 639-869 (1013)
378 COG4100 Cystathionine beta-lya 98.3 8.6E-06 1.9E-10 73.4 10.5 155 92-279 66-235 (416)
379 COG0161 BioA Adenosylmethionin 98.2 3.6E-05 7.7E-10 74.3 15.2 248 67-345 60-347 (449)
380 TIGR03251 LAT_fam L-lysine 6-t 98.2 0.00012 2.5E-09 71.9 18.1 143 99-251 89-265 (431)
381 KOG1402 Ornithine aminotransfe 98.1 0.00016 3.5E-09 66.1 16.3 171 96-292 102-292 (427)
382 KOG1401 Acetylornithine aminot 98.0 0.00062 1.3E-08 64.1 18.5 206 67-293 72-291 (433)
383 PRK08297 L-lysine aminotransfe 98.0 0.00034 7.5E-09 68.8 17.8 173 68-250 62-271 (443)
384 TIGR00699 GABAtrns_euk 4-amino 97.9 0.00049 1.1E-08 67.9 16.7 173 67-250 74-297 (464)
385 KOG2040 Glycine dehydrogenase 97.9 0.00051 1.1E-08 68.0 16.2 274 34-355 97-408 (1001)
386 PF12897 Aminotran_MocR: Alani 97.9 0.00094 2E-08 62.8 16.1 179 99-291 73-268 (425)
387 KOG1404 Alanine-glyoxylate ami 97.8 0.00046 1E-08 64.6 13.0 201 118-354 110-345 (442)
388 PLN02974 adenosylmethionine-8- 97.6 0.0034 7.3E-08 66.0 18.4 91 193-293 567-671 (817)
389 KOG2790 Phosphoserine aminotra 97.6 0.0013 2.9E-08 59.1 12.6 259 59-352 10-281 (370)
390 KOG1358 Serine palmitoyltransf 97.2 0.0091 2E-07 56.2 13.2 148 99-278 143-305 (467)
391 KOG1411 Aspartate aminotransfe 97.2 0.0061 1.3E-07 56.4 11.6 184 48-252 44-245 (427)
392 KOG1412 Aspartate aminotransfe 97.1 0.01 2.2E-07 54.3 12.7 128 108-252 88-225 (410)
393 PLN02994 1-aminocyclopropane-1 97.0 0.0072 1.6E-07 50.4 10.1 63 87-165 88-152 (153)
394 PF04864 Alliinase_C: Allinase 96.8 0.0087 1.9E-07 55.6 9.3 171 90-296 42-214 (363)
395 KOG1403 Predicted alanine-glyo 92.3 1.4 3.1E-05 40.4 9.9 151 120-291 105-293 (452)
396 KOG1405 4-aminobutyrate aminot 87.9 4.2 9.2E-05 38.3 9.2 80 192-279 255-345 (484)
397 PLN02672 methionine S-methyltr 70.2 1.1E+02 0.0023 34.0 13.9 147 75-246 409-565 (1082)
398 PLN02556 cysteine synthase/L-3 62.9 47 0.001 31.9 8.8 82 120-214 114-195 (368)
399 COG2515 Acd 1-aminocyclopropan 62.7 1.3E+02 0.0028 28.1 10.9 120 91-230 47-177 (323)
400 COG0031 CysK Cysteine synthase 61.0 26 0.00055 32.6 6.3 78 119-208 64-142 (300)
401 PF13407 Peripla_BP_4: Peripla 60.8 55 0.0012 28.8 8.5 65 167-243 20-85 (257)
402 COG2102 Predicted ATPases of P 58.9 83 0.0018 27.8 8.7 95 120-231 4-111 (223)
403 cd01455 vWA_F11C1-5a_type Von 57.6 20 0.00044 30.9 4.7 37 203-245 113-149 (191)
404 PRK14994 SAM-dependent 16S rib 56.5 84 0.0018 29.0 9.0 80 155-243 39-118 (287)
405 COG1954 GlpP Glycerol-3-phosph 55.6 17 0.00038 30.6 3.8 50 191-249 12-61 (181)
406 PRK08329 threonine synthase; V 54.6 1.3E+02 0.0027 28.6 10.1 52 120-183 107-158 (347)
407 PF02603 Hpr_kinase_N: HPr Ser 53.7 17 0.00037 29.1 3.5 43 189-243 64-110 (127)
408 PRK05638 threonine synthase; V 52.6 77 0.0017 31.2 8.6 51 120-182 115-165 (442)
409 COG0296 GlgB 1,4-alpha-glucan 52.4 11 0.00023 38.7 2.5 40 206-251 201-240 (628)
410 PLN03013 cysteine synthase 49.9 56 0.0012 32.1 7.0 53 120-184 178-230 (429)
411 cd01422 MGS Methylglyoxal synt 49.4 1.3E+02 0.0027 23.6 8.3 61 174-243 44-106 (115)
412 TIGR02026 BchE magnesium-proto 48.5 77 0.0017 31.7 8.0 70 171-249 32-103 (497)
413 PF02310 B12-binding: B12 bind 47.8 79 0.0017 24.3 6.5 71 167-248 20-91 (121)
414 COG1606 ATP-utilizing enzymes 47.1 71 0.0015 28.9 6.5 95 120-248 21-123 (269)
415 KOG2865 NADH:ubiquinone oxidor 47.1 1.6E+02 0.0035 27.4 8.8 81 154-244 85-176 (391)
416 COG2870 RfaE ADP-heptose synth 46.3 57 0.0012 31.6 6.1 78 158-244 95-177 (467)
417 TIGR00290 MJ0570_dom MJ0570-re 43.7 84 0.0018 27.9 6.5 91 120-231 4-110 (223)
418 cd01561 CBS_like CBS_like: Thi 42.7 2.1E+02 0.0045 26.2 9.4 53 120-184 56-108 (291)
419 PF05368 NmrA: NmrA-like famil 42.6 2.3E+02 0.0049 24.6 9.4 74 156-243 26-99 (233)
420 COG1105 FruK Fructose-1-phosph 41.9 69 0.0015 29.9 5.9 53 188-246 109-167 (310)
421 PRK11761 cysM cysteine synthas 41.6 2.2E+02 0.0047 26.3 9.3 52 120-183 66-117 (296)
422 cd01563 Thr-synth_1 Threonine 40.5 2.7E+02 0.0059 25.8 10.0 52 120-183 73-124 (324)
423 TIGR03573 WbuX N-acetyl sugar 40.3 3.3E+02 0.0071 25.8 12.3 101 119-248 62-170 (343)
424 TIGR00289 conserved hypothetic 39.7 1E+02 0.0022 27.3 6.5 103 120-231 4-110 (222)
425 PLN00011 cysteine synthase 39.4 2.8E+02 0.006 26.0 9.8 52 120-183 72-123 (323)
426 KOG0369 Pyruvate carboxylase [ 39.3 53 0.0011 33.9 5.0 35 211-252 164-198 (1176)
427 cd06448 L-Ser-dehyd Serine deh 38.9 3.3E+02 0.0071 25.4 11.4 51 120-182 54-104 (316)
428 PLN02565 cysteine synthase 37.2 1.2E+02 0.0026 28.5 7.0 52 120-183 70-121 (322)
429 TIGR01138 cysM cysteine syntha 37.1 2.3E+02 0.005 26.0 8.8 53 120-184 62-114 (290)
430 PLN02970 serine racemase 36.7 2.6E+02 0.0056 26.2 9.2 52 120-183 78-129 (328)
431 cd00886 MogA_MoaB MogA_MoaB fa 36.7 1.6E+02 0.0035 24.1 6.9 54 165-223 23-81 (152)
432 TIGR01275 ACC_deam_rel pyridox 35.6 1.2E+02 0.0025 28.2 6.6 55 120-183 58-113 (311)
433 PRK05096 guanosine 5'-monophos 34.9 2.3E+02 0.0049 27.0 8.1 22 219-246 200-221 (346)
434 COG1504 Uncharacterized conser 34.9 83 0.0018 24.5 4.3 48 188-243 47-94 (121)
435 COG2052 Uncharacterized protei 33.9 83 0.0018 22.7 3.9 33 204-249 18-50 (89)
436 cd06305 PBP1_methylthioribose_ 33.9 1.9E+02 0.0042 25.4 7.6 12 170-181 24-35 (273)
437 PRK08246 threonine dehydratase 33.8 1.9E+02 0.0041 26.9 7.7 52 120-183 71-122 (310)
438 COG0027 PurT Formate-dependent 33.8 1.4E+02 0.003 28.1 6.4 82 154-246 75-157 (394)
439 PF04273 DUF442: Putative phos 33.7 1E+02 0.0022 24.0 4.9 44 188-231 13-56 (110)
440 PRK06450 threonine synthase; V 33.7 2.2E+02 0.0048 26.9 8.2 52 120-183 100-151 (338)
441 COG0616 SppA Periplasmic serin 33.6 1.2E+02 0.0026 28.5 6.3 83 190-290 80-169 (317)
442 TIGR01362 KDO8P_synth 3-deoxy- 33.3 1.4E+02 0.003 27.1 6.2 60 180-248 118-185 (258)
443 PRK08197 threonine synthase; V 32.9 2.6E+02 0.0056 27.0 8.7 52 120-183 130-181 (394)
444 TIGR01536 asn_synth_AEB aspara 32.5 4.2E+02 0.0092 26.1 10.3 124 94-245 236-363 (467)
445 PF04309 G3P_antiterm: Glycero 32.5 8.3 0.00018 32.8 -1.5 48 193-249 10-57 (175)
446 COG0552 FtsY Signal recognitio 32.5 1.7E+02 0.0037 27.7 6.9 118 167-291 186-307 (340)
447 PRK06381 threonine synthase; V 32.3 2.1E+02 0.0045 26.6 7.7 52 120-183 66-117 (319)
448 PRK06110 hypothetical protein; 31.8 2.3E+02 0.0049 26.5 7.9 51 120-182 73-123 (322)
449 TIGR01139 cysK cysteine syntha 31.7 3.9E+02 0.0084 24.5 9.4 52 120-183 60-111 (298)
450 PRK05234 mgsA methylglyoxal sy 31.6 2.9E+02 0.0062 22.5 7.8 62 175-246 50-114 (142)
451 PF13380 CoA_binding_2: CoA bi 31.4 1E+02 0.0022 24.0 4.7 45 191-248 68-112 (116)
452 cd00640 Trp-synth-beta_II Tryp 31.3 1.6E+02 0.0034 26.1 6.5 52 120-183 53-104 (244)
453 PRK08638 threonine dehydratase 29.2 1.1E+02 0.0025 28.8 5.4 51 120-182 78-128 (333)
454 cd06282 PBP1_GntR_like_2 Ligan 29.0 3.2E+02 0.0069 23.8 8.2 14 195-208 72-85 (266)
455 smart00642 Aamy Alpha-amylase 28.6 47 0.001 27.9 2.4 30 214-249 65-94 (166)
456 PRK03910 D-cysteine desulfhydr 28.3 1.9E+02 0.0042 27.1 6.8 56 120-184 66-129 (331)
457 TIGR00334 5S_RNA_mat_M5 ribonu 28.1 1E+02 0.0022 26.2 4.3 52 188-250 10-61 (174)
458 PRK07476 eutB threonine dehydr 28.0 3.2E+02 0.0069 25.5 8.2 52 120-183 70-121 (322)
459 COG0313 Predicted methyltransf 27.9 2.5E+02 0.0055 25.7 7.0 80 156-243 32-111 (275)
460 TIGR02964 xanthine_xdhC xanthi 27.8 2.4E+02 0.0052 25.4 7.0 73 154-231 100-186 (246)
461 TIGR03679 arCOG00187 arCOG0018 27.3 4.2E+02 0.0092 23.2 10.2 94 121-231 2-111 (218)
462 cd03027 GRX_DEP Glutaredoxin ( 27.2 1.5E+02 0.0033 20.5 4.6 66 156-224 3-71 (73)
463 PF00128 Alpha-amylase: Alpha 27.1 40 0.00087 30.6 1.9 34 210-249 43-76 (316)
464 TIGR00096 probable S-adenosylm 27.0 5E+02 0.011 23.9 10.1 81 155-243 26-106 (276)
465 PRK08813 threonine dehydratase 27.0 1.6E+02 0.0035 28.1 5.9 51 120-182 84-134 (349)
466 TIGR00288 conserved hypothetic 26.9 3.2E+02 0.007 22.9 7.0 73 156-245 60-136 (160)
467 PF01972 SDH_sah: Serine dehyd 26.6 1.4E+02 0.003 27.5 5.0 74 191-283 76-154 (285)
468 TIGR00177 molyb_syn molybdenum 26.6 3E+02 0.0066 22.2 6.9 57 162-223 27-86 (144)
469 PF01976 DUF116: Protein of un 26.5 3.8E+02 0.0082 22.3 8.6 72 104-200 81-158 (158)
470 PRK00685 metal-dependent hydro 26.5 4.2E+02 0.0091 22.8 10.1 75 156-231 136-213 (228)
471 cd06319 PBP1_ABC_sugar_binding 26.5 2.9E+02 0.0063 24.3 7.5 14 194-207 47-60 (277)
472 TIGR02035 D_Ser_am_lyase D-ser 26.3 1.3E+02 0.0028 29.7 5.3 53 119-183 154-206 (431)
473 cd01542 PBP1_TreR_like Ligand- 26.1 3.7E+02 0.0081 23.3 8.1 8 202-209 78-85 (259)
474 PRK06815 hypothetical protein; 25.9 2E+02 0.0042 26.9 6.3 52 120-183 71-122 (317)
475 cd01137 PsaA Metal binding pro 25.6 2.7E+02 0.0059 25.5 7.1 61 163-231 183-248 (287)
476 PRK10717 cysteine synthase A; 25.2 1.4E+02 0.0031 27.9 5.3 53 120-184 67-119 (330)
477 TIGR01305 GMP_reduct_1 guanosi 25.1 6E+02 0.013 24.2 9.7 96 189-295 158-261 (343)
478 COG3453 Uncharacterized protei 25.0 2.7E+02 0.0059 22.2 5.8 50 160-211 43-97 (130)
479 cd00758 MoCF_BD MoCF_BD: molyb 25.0 3.3E+02 0.0071 21.6 6.7 57 162-223 19-78 (133)
480 cd06322 PBP1_ABC_sugar_binding 24.8 3.2E+02 0.0069 23.9 7.4 16 194-209 47-62 (267)
481 PTZ00323 NAD+ synthase; Provis 24.7 5.7E+02 0.012 23.7 10.4 102 67-185 6-115 (294)
482 COG1038 PycA Pyruvate carboxyl 24.7 2.4E+02 0.0052 30.1 6.9 36 211-253 138-173 (1149)
483 cd01018 ZntC Metal binding pro 24.6 5.2E+02 0.011 23.2 9.1 66 163-243 176-245 (266)
484 COG0367 AsnB Asparagine syntha 24.3 5E+02 0.011 26.4 9.3 125 94-250 213-349 (542)
485 TIGR01501 MthylAspMutase methy 24.2 2.2E+02 0.0047 23.1 5.4 58 167-231 21-79 (134)
486 PLN02828 formyltetrahydrofolat 24.1 5.6E+02 0.012 23.4 10.2 49 156-207 101-152 (268)
487 TIGR02990 ectoine_eutA ectoine 24.0 5.2E+02 0.011 23.1 9.2 64 169-243 139-211 (239)
488 PRK13028 tryptophan synthase s 23.8 3.6E+02 0.0077 26.3 7.8 52 120-183 113-168 (402)
489 TIGR02634 xylF D-xylose ABC tr 23.7 2.8E+02 0.0061 25.2 7.0 15 195-209 72-86 (302)
490 cd06447 D-Ser-dehyd D-Serine d 23.5 2.2E+02 0.0048 27.8 6.3 52 120-183 137-188 (404)
491 PRK09441 cytoplasmic alpha-amy 23.3 60 0.0013 32.3 2.4 33 211-249 73-105 (479)
492 COG2099 CobK Precorrin-6x redu 23.2 2E+02 0.0043 26.1 5.4 25 217-247 51-75 (257)
493 TIGR02991 ectoine_eutB ectoine 23.2 2.2E+02 0.0048 26.5 6.1 52 120-183 70-121 (317)
494 COG2185 Sbm Methylmalonyl-CoA 23.2 2.9E+02 0.0063 22.7 5.9 72 154-231 12-90 (143)
495 cd01562 Thr-dehyd Threonine de 22.9 2.4E+02 0.0053 25.8 6.3 52 120-183 68-119 (304)
496 cd07018 S49_SppA_67K_type Sign 22.8 1.6E+02 0.0035 25.8 4.9 60 189-250 28-92 (222)
497 PRK14045 1-aminocyclopropane-1 22.7 5.1E+02 0.011 24.2 8.6 56 120-184 72-128 (329)
498 TIGR01137 cysta_beta cystathio 22.7 3E+02 0.0064 27.0 7.2 53 120-184 65-117 (454)
499 PRK02991 D-serine dehydratase; 22.7 2.6E+02 0.0057 27.6 6.7 51 120-182 160-210 (441)
500 CHL00073 chlN photochlorophyll 22.6 1.4E+02 0.0029 29.7 4.7 45 193-244 83-134 (457)
No 1
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-53 Score=412.48 Aligned_cols=317 Identities=38% Similarity=0.578 Sum_probs=284.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhh-----cCCCCcccccccCCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHH
Q 018437 29 RFKMPDNSMPKEAAYQVINDELML-----DGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNM 103 (356)
Q Consensus 29 ~~~lp~~~~~~~~i~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~ 103 (356)
...+|+.+.+.++++.++.....+ ++||+++....+++.+++.+.+++..+++.|..+++.+|.+.++|+++..|
T Consensus 30 ~~~~p~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~ 109 (460)
T COG0076 30 SRMAPEKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLVSALNKNLGDPDESPAAAELEERVVNM 109 (460)
T ss_pred hccCCccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHH
Confidence 346788889999999998877542 568888877888888889999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh-cCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEE
Q 018437 104 IAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE-QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVK 182 (356)
Q Consensus 104 la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~-~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~ 182 (356)
+++++|++. ...|++|+||||||++|++++|+.+.+.+.. .+...+.|+||+|..+|+|+.|+++++|++++.+|
T Consensus 110 l~~l~~~~~----~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~ 185 (460)
T COG0076 110 LSDLLGAPE----EASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVP 185 (460)
T ss_pred HHHHhCCCC----CCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEE
Confidence 999999974 3679999999999999999999998765433 23334457999999999999999999999999999
Q ss_pred ecCCccccCHHHHHHHHhhCceE--EEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCc
Q 018437 183 LEEGYYVMNPVKAVELVDENTIC--VAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE 260 (356)
Q Consensus 183 ~~~~~~~~d~~~L~~~i~~~~~~--v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~ 260 (356)
+++.+++||+++|+++|++++.. |+.+.|+|++|.+|||++|+++|+++ ++|+|||+|+||+++||..+...
T Consensus 186 ~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~------~i~lHVDAA~GG~~~pf~~~~~~ 259 (460)
T COG0076 186 TVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEY------GIWLHVDAAFGGFLLPFLEPDGR 259 (460)
T ss_pred eccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHHHHc------CCcEEEEccccceeecccCccch
Confidence 98745999999999999999887 99999999999999999999999999 99999999999999999988887
Q ss_pred ccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCC-CCCCccccCCCChhHHHHHHHHHHHhCHHH
Q 018437 261 WDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGS-DQPTFTLNFSKGSSQIIAQYYQFIRLGFEE 339 (356)
Q Consensus 261 ~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G 339 (356)
+++.++++|||++|+|||+++|+|||++++|+++.+++.+.....|+.+ ...++++.|||++..++++|+.|+.+|.+|
T Consensus 260 ~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eG 339 (460)
T COG0076 260 WDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREG 339 (460)
T ss_pred hhcCCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhH
Confidence 8899999999999999999999999999999987666666566677765 456788999999999999999999999999
Q ss_pred HHHHHHHHHhccCccc
Q 018437 340 ITFTFISSLKVCPFLV 355 (356)
Q Consensus 340 ~~~~~~~~~~~a~~l~ 355 (356)
|++++++++++|+||+
T Consensus 340 y~~l~~~~~~~a~~la 355 (460)
T COG0076 340 YRKLLDRTLELARYLA 355 (460)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999985
No 2
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=7.9e-52 Score=400.15 Aligned_cols=337 Identities=64% Similarity=1.142 Sum_probs=286.0
Q ss_pred ccchhhhhcCCCCCCCCCCCCHHHHHHHHHHHhhhcCCCCcccccccCCCChHHHHHHHHHHhcccCCCcccCcchHHHH
Q 018437 18 FASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQ 97 (356)
Q Consensus 18 ~~~~~~~~~~~~~~lp~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le 97 (356)
|+++-..-.+++..||++|.+.+++++.+...+.++.+..-.+++|+++++.|.+.+++..++++|.++|..++...++|
T Consensus 3 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~iyld~~a~~~~~~~~tt~~~p~~~~~~~~~l~~~~~np~s~~~~~~le 82 (431)
T TIGR01788 3 YGSRAVSTGIPKYRMPEEEMPPDAAYQLIHDELSLDGNPRLNLATFVTTWMEPEARKLMDETINKNMIDKDEYPQTAEIE 82 (431)
T ss_pred ccccccccCCCcccCCCCCCCHHHHHHHHHHHhhhcCCcceeeeeeeCCCCCHHHHHHHHHHHhcCCCCcccCccHHHHH
Confidence 45666677788889999999999999999988776543322347899999989999999999998888888888888999
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCe
Q 018437 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE 177 (356)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~ 177 (356)
+++++|+++++|+++.. ....+++|+||||||++|+++++..+..+.+..|....+..|++|+.+|+|+.++++.+|++
T Consensus 83 ~~~~~~la~llg~~~~~-~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~ 161 (431)
T TIGR01788 83 NRCVNMLADLWHAPAKD-AEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVE 161 (431)
T ss_pred HHHHHHHHHHhCCCCCC-CCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCce
Confidence 99999999999998310 12557789999999999999987654332222232223458999999999999999999999
Q ss_pred eEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCC
Q 018437 178 LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP 257 (356)
Q Consensus 178 v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~ 257 (356)
++.||++++++++|+++|+++|+++|.+|+++++||.+|++||+++|+++|++++..++.++|+|||+||+++.+||..+
T Consensus 162 v~~i~~d~~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~ 241 (431)
T TIGR01788 162 LREVPMDPGRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYP 241 (431)
T ss_pred eEEEecCCCceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCC
Confidence 99999987436999999999999999999999999999999999999999999855555479999999999999998888
Q ss_pred CCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCH
Q 018437 258 DLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF 337 (356)
Q Consensus 258 ~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~ 337 (356)
+.++++..+++||+++|+|||+++|+|+|++++|+++.+...+...+.|+++...+.++++||++..+++.|..|+.+|.
T Consensus 242 ~~~~~~~~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~ 321 (431)
T TIGR01788 242 DLEWDFRLPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGR 321 (431)
T ss_pred CchhhcCCCCceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcH
Confidence 88888888899999999999999999999999998755544555567788876555788999998778999999999999
Q ss_pred HHHHHHHHHHHhccCccc
Q 018437 338 EEITFTFISSLKVCPFLV 355 (356)
Q Consensus 338 ~G~~~~~~~~~~~a~~l~ 355 (356)
+|+++++++++++++||.
T Consensus 322 ~G~~~i~~~~~~la~~l~ 339 (431)
T TIGR01788 322 EGYRKIMQNSLDVARYLA 339 (431)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999999874
No 3
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=100.00 E-value=7.5e-52 Score=394.64 Aligned_cols=314 Identities=26% Similarity=0.350 Sum_probs=255.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHhh----hcCCCCcccccccCCCCh--HHHHHHHHHHhcccCCCcccCcchHHHHHHHHHH
Q 018437 30 FKMPDNSMPKEAAYQVINDELM----LDGNPRLNLASFVTTWME--PECDKLVMASINKNYVDMDEYPVTTELQNRCVNM 103 (356)
Q Consensus 30 ~~lp~~~~~~~~i~~~~~~~~~----~~~~~~~~l~~~~~~~~~--~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~ 103 (356)
..+|+.|.+.+++++++.+.+. .+.||++ .++.++.+. ..+.+++..++|+|...+..+|...++|.++.+|
T Consensus 10 ~~lp~~~~~~~~vl~~~~~~l~~~~~~~~~P~~--~~~~~~~~~~~~i~~~~l~~~~n~n~~~~~~~P~~~~~E~~vi~~ 87 (373)
T PF00282_consen 10 EELPEEGESLEEVLKDLREILAPGVTHWHHPRF--FGFVPGGPSPASILADLLASALNQNGFTWEASPAATEIEREVIRW 87 (373)
T ss_dssp CCHHSSHH-HHHHHHHHHHHTHGCS-TTTSTTB--ESSSHT--CHHHHHHHHHHHHHT-BTTSTTTSHHHHHHHHHHHHH
T ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCChhH--hhhccCCccHHHHHHHHHHhhhcccccccccccccccchHHHHHH
Confidence 4889999999999999988765 2557877 355554432 4778999999999999999999999999999999
Q ss_pred HHHHhCCCCCCC--CCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCC-CCCCeEEecCCCcchHHHHHHhhCCeeEE
Q 018437 104 IAHLFNTPVADD--KTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKP-YDKPNIVTGANVQVCWEKFARYFEVELKE 180 (356)
Q Consensus 104 la~l~g~~~~~~--~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~-~~~~~vi~s~~~h~s~~~~~~~~G~~v~~ 180 (356)
+++++|++.++. ...+|++|+|||+||++|++++|+++.++.+..|.. ..++.|++|+.+|+|+.+++.++|++++.
T Consensus 88 l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~ 167 (373)
T PF00282_consen 88 LADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRK 167 (373)
T ss_dssp HHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEE
T ss_pred HHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcceeeeEEEE
Confidence 999999994321 125799999999999999999999887766555544 44568999999999999999999999999
Q ss_pred EEecCCccccCHHHHHHHHhh---C---ceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccc
Q 018437 181 VKLEEGYYVMNPVKAVELVDE---N---TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (356)
Q Consensus 181 v~~~~~~~~~d~~~L~~~i~~---~---~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (356)
||++++ ++||+++|+++|.+ + +.+|+++.|+|.+|++||+++|.++|+++ ++|+||||||||..+
T Consensus 168 I~~~~~-~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~------~~wlHVDaA~gg~~~-- 238 (373)
T PF00282_consen 168 IPTDED-GRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKY------NIWLHVDAAYGGSAL-- 238 (373)
T ss_dssp E-BBTT-SSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHC------T-EEEEEETTGGGGG--
T ss_pred ecCCcc-hhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhcccc------ceeeeeccccccccc--
Confidence 999985 99999999999865 2 55899999999999999999999999999 999999999999544
Q ss_pred cCCCCc-ccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCC---------CCccccCCCChhH
Q 018437 255 LYPDLE-WDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQ---------PTFTLNFSKGSSQ 324 (356)
Q Consensus 255 ~~~~~~-~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~tr~~~~ 324 (356)
+.+..+ ..+.++++||+++|+|||+++|++||++++|++..+...+..++.|++... .+++++||| ...
T Consensus 239 ~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR-~~~ 317 (373)
T PF00282_consen 239 LSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSR-RFR 317 (373)
T ss_dssp GHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSG-HHH
T ss_pred ccccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccccccccccccccccccccc-cch
Confidence 344433 344478999999999999999999999999998777666666788988431 346789999 556
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 325 IIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 325 ~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
++++|.+|+.+|.+||++++++++++|+||+
T Consensus 318 alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~ 348 (373)
T PF00282_consen 318 ALKLWATLKSLGREGYRERIRRCIELARYLA 348 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999985
No 4
>PLN02590 probable tyrosine decarboxylase
Probab=100.00 E-value=1.5e-50 Score=398.16 Aligned_cols=329 Identities=16% Similarity=0.183 Sum_probs=271.0
Q ss_pred cccccccchhhhhcCCCCCCCCCCCCHHHHHHHHHHHhh----hcCCCCcccccccCCCCh--HHHHHHHHHHhcccCCC
Q 018437 13 ILSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELM----LDGNPRLNLASFVTTWME--PECDKLVMASINKNYVD 86 (356)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~i~~~~~~~~~----~~~~~~~~l~~~~~~~~~--~~v~~~i~~~~~~~~~~ 86 (356)
.+.+...+.+++..++. ++|+.|.+.+++++++.+.+. .+.||+| ++|.++++. ..+.|++.+++|.+...
T Consensus 85 pv~~~~~p~~l~~~l~~-~~P~~g~~~~~il~~~~~~i~p~~~~~~hP~f--~a~~~~~~~~~~~lgd~l~sa~n~~~~~ 161 (539)
T PLN02590 85 PVLSQVQPGYLRDMLPD-SAPERPESLKELLDDVSKKIMPGITHWQSPSY--FAYYASSTSVAGFLGEMLNAGLSVVGFT 161 (539)
T ss_pred CCCCCCChHHHHHhcCC-CCCCCCCCHHHHHHHHHHHHhccCCcCCCCCe--eEeccCCCcHHHHHHHHHHHhcccccCC
Confidence 34445556666777764 899999999999999988764 3679987 466665543 47899999999999999
Q ss_pred cccCcchHHHHHHHHHHHHHHhCCCCCCC--CCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCc
Q 018437 87 MDEYPVTTELQNRCVNMIAHLFNTPVADD--KTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ 164 (356)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g~~~~~~--~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h 164 (356)
|..+|...++|+++.+|+++++|++.... ...+|++|+|||+||++|++++|+.+.++....+ ..+..|++|+.+|
T Consensus 162 ~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~--~~~~vvy~S~~aH 239 (539)
T PLN02590 162 WLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTL--LPQLVVYGSDQTH 239 (539)
T ss_pred cccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccC--CCCEEEEecCCch
Confidence 99999999999999999999999986311 1256899999999999999999986543221111 1234788899999
Q ss_pred chHHHHHHhhCCe---eEEEEecC-CccccCHHHHHHHHhh------CceEEEEecCCCcccccCCHHHHHHHHHHhhhc
Q 018437 165 VCWEKFARYFEVE---LKEVKLEE-GYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEE 234 (356)
Q Consensus 165 ~s~~~~~~~~G~~---v~~v~~~~-~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~ 234 (356)
+|+.|+++++|++ ++.||+|. ++++||+++|+++|.+ .|.+|+.+.|+|.+|++|||++|+++|++|
T Consensus 240 ~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~--- 316 (539)
T PLN02590 240 SSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKY--- 316 (539)
T ss_pred HHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHh---
Confidence 9999999999995 89999985 3589999999999975 378999999999999999999999999999
Q ss_pred cCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCC---
Q 018437 235 TGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSD--- 310 (356)
Q Consensus 235 ~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~--- 310 (356)
++|+||||||||+.+ ++++.+..+. ++++||+++|+|||+++|++||++++|++..+...+...+.|+...
T Consensus 317 ---g~WlHVDaA~GG~al--~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~ 391 (539)
T PLN02590 317 ---GIWLHVDAAYAGNAC--ICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSK 391 (539)
T ss_pred ---CCeEEEecchhhhhh--cChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccc
Confidence 999999999999876 4555443333 7889999999999999999999999998766555555566677431
Q ss_pred ------CCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 311 ------QPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 311 ------~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
..++++++||++. ++++|.+|+.+|.+||++++++++++|+||.
T Consensus 392 ~~~~~d~~d~~i~lsRr~r-aLklW~~lr~~G~~G~~~~i~~~~~lA~~~~ 441 (539)
T PLN02590 392 KDTVVNYKDWQISLSRRFR-SLKLWMVLRLYGSENLRNFIRDHVNLAKHFE 441 (539)
T ss_pred cccCCCccccCCCCCCchH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2345788999976 9999999999999999999999999999985
No 5
>PLN02880 tyrosine decarboxylase
Probab=100.00 E-value=9.7e-48 Score=378.00 Aligned_cols=323 Identities=16% Similarity=0.212 Sum_probs=260.8
Q ss_pred cchhhhhcCCCCCCCCCCCCHHHHHHHHHHHhh----hcCCCCcccccccCCCC--hHHHHHHHHHHhcccCCCcccCcc
Q 018437 19 ASRYVRAAIPRFKMPDNSMPKEAAYQVINDELM----LDGNPRLNLASFVTTWM--EPECDKLVMASINKNYVDMDEYPV 92 (356)
Q Consensus 19 ~~~~~~~~~~~~~lp~~~~~~~~i~~~~~~~~~----~~~~~~~~l~~~~~~~~--~~~v~~~i~~~~~~~~~~~~~~~~ 92 (356)
.+...+..++. .+|+++.+.+++++.+.+.+. .+.||+| .+|.++.+ ...+.+++...+|++...+..+|.
T Consensus 43 ~p~~l~~~~~~-~~p~~~~~~~~~l~~~~~~i~~~~~~~~hP~f--~~~~~~~~~~~~~lad~l~~~~n~~~~~~~~sp~ 119 (490)
T PLN02880 43 QPGYLRELLPD-SAPNQPETLDQVLDDVQAKILPGVTHWQSPNY--FAYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPA 119 (490)
T ss_pred CHHHHHHhccc-cCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCe--eEeccCCCcHHHHHHHHHHHhhccCCcccccCcc
Confidence 34445556654 789999999999999987664 3678987 35554443 347889999999988888999999
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCC--CCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH
Q 018437 93 TTELQNRCVNMIAHLFNTPVADD--KTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF 170 (356)
Q Consensus 93 ~~~le~~~~~~la~l~g~~~~~~--~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~ 170 (356)
..++|+++.+|+++++|++.... ...+|++|+|||+||++|++++|+...+.....+ ..+..|++|+.+|+|+.|+
T Consensus 120 ~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~--~~~~vv~~S~~aH~Sv~Ka 197 (490)
T PLN02880 120 ATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNA--LEKLVVYASDQTHSALQKA 197 (490)
T ss_pred cHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccc--cCCeEEEEcCCchHHHHHH
Confidence 99999999999999999986310 0135899999999999999999987543221111 1234788899999999999
Q ss_pred HHhhCCe---eEEEEecC-CccccCHHHHHHHHhh------CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCc
Q 018437 171 ARYFEVE---LKEVKLEE-GYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTP 240 (356)
Q Consensus 171 ~~~~G~~---v~~v~~~~-~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~ 240 (356)
++++|++ ++.||+|+ ++++||+++|+++|++ .|.+|+.+.|+|.+|++||+++|+++|+++ |+|
T Consensus 198 a~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~------~iw 271 (490)
T PLN02880 198 CQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSN------GMW 271 (490)
T ss_pred HHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHc------CCE
Confidence 9999996 89999985 3589999999999975 278999999999999999999999999999 999
Q ss_pred EEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCC---------
Q 018437 241 IHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSD--------- 310 (356)
Q Consensus 241 l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~--------- 310 (356)
+|||||||++++ +.++.+..+. ++++||+++|+|||+++|++||++++|++..+...+.....|+...
T Consensus 272 lHVDaA~gg~~~--~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~ 349 (490)
T PLN02880 272 FHVDAAYAGSAC--ICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVD 349 (490)
T ss_pred EEEehhhHHHHH--hCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCC
Confidence 999999999876 3444444444 5689999999999999999999999997655434444555665432
Q ss_pred CCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 311 QPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 311 ~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
...++++++|... ++++|.+|+.+|.+|+++++++++++|+||.
T Consensus 350 ~~~~~i~~~rr~~-alklw~~l~~~G~~g~~~~i~~~~~lA~~~~ 393 (490)
T PLN02880 350 YKDWQIPLGRRFR-SLKLWMVLRLYGVENLQSYIRNHIKLAKEFE 393 (490)
T ss_pred hhccCcCCCCccc-HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 1234577888886 8999999999999999999999999999874
No 6
>PLN02263 serine decarboxylase
Probab=100.00 E-value=1.5e-46 Score=361.37 Aligned_cols=285 Identities=19% Similarity=0.188 Sum_probs=233.8
Q ss_pred HHHHHHHHHHhhhcCCCCcccccccCCC--C-hHHHHHHHHHHhcccCCCcccCc----chHHHHHHHHHHHHHHhCCCC
Q 018437 40 EAAYQVINDELMLDGNPRLNLASFVTTW--M-EPECDKLVMASINKNYVDMDEYP----VTTELQNRCVNMIAHLFNTPV 112 (356)
Q Consensus 40 ~~i~~~~~~~~~~~~~~~~~l~~~~~~~--~-~~~v~~~i~~~~~~~~~~~~~~~----~~~~le~~~~~~la~l~g~~~ 112 (356)
+++++.+.+.+... .. ++.+| |.. . ...+.+.+...+| |.++|...+ .+.++|+++.+|+++++|+++
T Consensus 76 ~~~l~~~~~~~~~~-~~--~~~gY-p~n~~~d~s~l~~~l~~~~n-N~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g~p~ 150 (470)
T PLN02263 76 ASVLARYRKTLVER-TK--HHLGY-PYNLDFDYGALGQLQHFSIN-NLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEK 150 (470)
T ss_pred HHHHHHHHHHHHhc-cc--ceeCC-CCcccCChhhHHHHHHhhcc-CCCCccccCCcchhHHHHHHHHHHHHHHHhCCCC
Confidence 55555555554322 11 13456 332 2 3456776655554 666654443 689999999999999999986
Q ss_pred CCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCH
Q 018437 113 ADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNP 192 (356)
Q Consensus 113 ~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~ 192 (356)
+ ..+|++|+||||||++|++++|+.++ +..+++|+.+|+|+.|+++++|++++.||++++ ++||+
T Consensus 151 ~---~~~G~vtsGGTEaNL~Al~aARe~~~-----------~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~~-g~mD~ 215 (470)
T PLN02263 151 N---EYWGYITNCGTEGNLHGILVGREVFP-----------DGILYASRESHYSVFKAARMYRMECVKVDTLVS-GEIDC 215 (470)
T ss_pred C---CCeEEEeCcHHHHHHHHHHHHHhhcC-----------CcEEEEcCCccHHHHHHHHhcCCcceEeccCCC-CcCcH
Confidence 2 26799999999999999999998531 358999999999999999999999999999874 99999
Q ss_pred HHHHHHHhhC---ceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCC-----cEEEecccccccccccCCCCccccc
Q 018437 193 VKAVELVDEN---TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDT-----PIHVDAASGGFIAPFLYPDLEWDFR 264 (356)
Q Consensus 193 ~~L~~~i~~~---~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~-----~l~vD~a~~~~~~~~~~~~~~~~~~ 264 (356)
++|+++|.++ |.+|+++.|+|++|++|||++|+++|+++ |+ |+||||||||+++||......+++.
T Consensus 216 ~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~------g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~ 289 (470)
T PLN02263 216 ADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEEC------GFSQDRFYIHCDGALFGLMMPFVKRAPKVTFK 289 (470)
T ss_pred HHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHc------CCccCCeeEEEeccchhhHhhhcccccccCCC
Confidence 9999999764 67889999999999999999999999999 75 9999999999999987765567776
Q ss_pred CCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHH
Q 018437 265 LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTF 344 (356)
Q Consensus 265 ~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~ 344 (356)
. .+||+++|+|||+++|++||++++|++. + ..+..++.|+...+ .++.|||++..++++|++|+.+|.+|+++++
T Consensus 290 ~-~vDSIsvD~HK~l~~P~~cgvll~R~~~-~-~~~~~~~~Yl~~~d--~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i 364 (470)
T PLN02263 290 K-PIGSVSVSGHKFVGCPMPCGVQITRMEH-I-NVLSSNVEYLASRD--ATIMGSRNGHAPIFLWYTLNRKGYRGFQKEV 364 (470)
T ss_pred c-CccEEEECCccccCCCcCEEEEEEehhh-H-hhhccChHhhCCCC--CCcCCCCCcHHHHHHHHHHHHhCHHHHHHHH
Confidence 4 4999999999999999999999999642 2 34445678887754 4678999998799999999999999999999
Q ss_pred HHHHhccCccc
Q 018437 345 ISSLKVCPFLV 355 (356)
Q Consensus 345 ~~~~~~a~~l~ 355 (356)
++++++|+||.
T Consensus 365 ~~~~~~A~~l~ 375 (470)
T PLN02263 365 QKCLRNAHYLK 375 (470)
T ss_pred HHHHHHHHHHH
Confidence 99999999874
No 7
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-47 Score=353.40 Aligned_cols=336 Identities=49% Similarity=0.728 Sum_probs=307.5
Q ss_pred CCCCCccccccccccchhhhhcCCCCCCCCCCCCHHHHHHHHHHHhhhcCCCCcccccccCCCChHHHHHHHHHHhcc-c
Q 018437 5 TTETDSREILSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINK-N 83 (356)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~i~~~~~~-~ 83 (356)
.+|..+-++..+.|.+++-.+.++..++|+.|++.+++++.++++..++++|+.++.++..++.++...+++.+.++. |
T Consensus 29 ~~~~~~~k~~~~~~~~~~~~~~~~~~~lP~~gl~~d~v~~~i~~~~~ld~~~~~~~vS~~v~~~~~~~~~l~~~~~~k~N 108 (491)
T KOG1383|consen 29 EKELNKVKDQLSTFMSRYDRQKMYFFTLPSKGLPKDAVLELINDELMLDGNPRLGLASGVVYWGEPELDKLIMEAYNKFN 108 (491)
T ss_pred HHHHhhhhhhhhhhhhhhhhccceeecCCCCCCCHHHHHHHHHHHhccCCCcccCeeeEEEecCCcchhhHHHHHHhhcC
Confidence 345556677888899999999999999999999999999999999999999999988998888888888998888888 9
Q ss_pred CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCC
Q 018437 84 YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANV 163 (356)
Q Consensus 84 ~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~ 163 (356)
+.+++.+|+..+++.++.++++.+++.+.+ .+|..|+|||||..++....+++ |+.+ .++..|+++++...
T Consensus 109 ~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~----~~g~~t~G~Ses~l~~~k~~~~~----r~~~-k~I~~p~iv~~~~v 179 (491)
T KOG1383|consen 109 PLHPDEFPVVRKLEAECVNMIANLFNAPSD----SCGCGTVGGSESGLAAKKSYRNR----RKAQ-KGIDKPNIVTPQNV 179 (491)
T ss_pred ccCccccchhHHHHHHHHHHHHHHhcCCcc----ccCccccccchHHHHHHHHHHHH----HHhc-cCCCCccccchHHH
Confidence 999999999999999999999999999952 67999999999966665555443 4443 45667899999999
Q ss_pred cchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHH-hhhccCCCCcEE
Q 018437 164 QVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTK-KNEETGWDTPIH 242 (356)
Q Consensus 164 h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~-~~~~~~~~~~l~ 242 (356)
|.+++++++.++++++.||++++++++|+..+.+.++++|+++++..|++|+|.++|+++|.+++-+ + ++++|
T Consensus 180 ~~a~eK~a~yf~v~l~~V~~~~~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w------~ipiH 253 (491)
T KOG1383|consen 180 HAAFEKAARYFEVELREVPLDEGDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIW------DIPIH 253 (491)
T ss_pred HHHHHHHHhhEEEEEEeeeccccceEecHHHHHHHhccceEEEEEEcCCCCccchhhHHHHHHHHHHHh------CCcee
Confidence 9999999999999999999997779999999999999999999999999999999999999999999 8 99999
Q ss_pred Eeccccccccc-ccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCCCC
Q 018437 243 VDAASGGFIAP-FLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKG 321 (356)
Q Consensus 243 vD~a~~~~~~~-~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~ 321 (356)
||+|.|+|+.| +..+..+++|+.+++-|+++|+||++++|.|+|++++|++++++.++...+.|+|+.+.++|++|||+
T Consensus 254 vDa~~GgFi~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~ 333 (491)
T KOG1383|consen 254 VDACLGGFINPAGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRP 333 (491)
T ss_pred ecccCccccccccccCccccccCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCc
Confidence 99999999998 55566689999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 322 SSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 322 ~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
+..++++|++|..+|.+||.+..++|.+.+++|.
T Consensus 334 g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~ 367 (491)
T KOG1383|consen 334 GSQVAAQWAALMSLGEEGYRENTQNIVETARKLR 367 (491)
T ss_pred ccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998874
No 8
>PLN03032 serine decarboxylase; Provisional
Probab=100.00 E-value=1.8e-45 Score=349.07 Aligned_cols=268 Identities=18% Similarity=0.197 Sum_probs=227.4
Q ss_pred cccCCC-ChHHHHHHHHHHhcccCCCcccCc----chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 62 SFVTTW-MEPECDKLVMASINKNYVDMDEYP----VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 62 ~~~~~~-~~~~v~~~i~~~~~~~~~~~~~~~----~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
+|..+. ....+.+.+..++.+|.++|.... .+.++|+++++|+++++|+++++ .+|++|+||||||++++++
T Consensus 28 gy~~~~~~~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~---~~G~fTsGGTEaNl~al~~ 104 (374)
T PLN03032 28 GYPYNLDFDYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDE---YWGYITTCGTEGNLHGILV 104 (374)
T ss_pred CCCchhccChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCcc---CCEEEeCchHHHHHHHHHH
Confidence 444433 234556777777777777776543 68999999999999999998632 5699999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh---CceEEEEecCCC
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGST 213 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~ 213 (356)
+|+.. .++.|++|..+|+|+.++++.+|++++.||++++ ++||+++|+++|++ +|.+|+++++||
T Consensus 105 ar~~~-----------~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~-g~id~~~L~~~i~~~~~~~~lvv~tagtt 172 (374)
T PLN03032 105 GREVF-----------PDGILYASRESHYSVFKAARMYRMEAVKVPTLPS-GEIDYDDLERALAKNRDKPAILNVNIGTT 172 (374)
T ss_pred HHHhC-----------CCcEEEeCCCceeHHHHHHHHcCCCCeEeeeCCC-CcCcHHHHHHHHHHcCCCCEEEEEEecCc
Confidence 87641 1248999999999999999999999999999875 99999999999987 578999999999
Q ss_pred cccccCCHHHHHHHHHHhhhccCCC-----CcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEE
Q 018437 214 LTGEFEDVKLLHDLLTKKNEETGWD-----TPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWV 288 (356)
Q Consensus 214 ~tG~~~~i~~I~~i~~~~~~~~~~~-----~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l 288 (356)
++|++||+++|+++|+++ + +|+|||+||+++..||......+++. .++||+++|+|||+++|+|||++
T Consensus 173 ~tG~idpi~eI~~i~~~~------g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~-~~vDSis~s~HK~~g~P~g~G~l 245 (374)
T PLN03032 173 VKGAVDDLDRILRILKEL------GYTEDRFYIHCDGALFGLMMPFVSRAPEVTFR-KPIGSVSVSGHKFLGCPMPCGVA 245 (374)
T ss_pred CCccCCCHHHHHHHHHHh------CCCCCCeeEEEEccchhhhhhccCCCcccCCC-cCCcEEEECcccccCCCcCeEEE
Confidence 999999999999999999 6 59999999999999876554456665 47999999999999999999999
Q ss_pred EEeCCCCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 289 VWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
++|++ .+ ..+...+.|+... +.++.|||++..++++|++|+.+|.+||++++++++++|+||.
T Consensus 246 l~r~~-~~-~~~~~~~~Yl~~~--d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~ 308 (374)
T PLN03032 246 LTRKK-HV-KALSQNVEYLNSR--DATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLK 308 (374)
T ss_pred EEEch-hh-HhhccCCcccCCC--CCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 99974 33 3444567888764 4678899998889999999999999999999999999999984
No 9
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=100.00 E-value=3.7e-45 Score=360.51 Aligned_cols=316 Identities=19% Similarity=0.268 Sum_probs=250.0
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHHHhh----hcCCCCcccccccCCCChH---HHHHHHHHHhcccCCCcccCcchHHHHH
Q 018437 26 AIPRFKMPDNSMPKEAAYQVINDELM----LDGNPRLNLASFVTTWMEP---ECDKLVMASINKNYVDMDEYPVTTELQN 98 (356)
Q Consensus 26 ~~~~~~lp~~~~~~~~i~~~~~~~~~----~~~~~~~~l~~~~~~~~~~---~v~~~i~~~~~~~~~~~~~~~~~~~le~ 98 (356)
.++...+|+.+.+.+++++.+.+.+. .+.||+| .++.++..++ .+.+ +...+|+|...+..+|...++|+
T Consensus 56 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~hP~f--~g~~~~~~p~~~~~l~~-l~~~lN~n~~~~~~spa~t~lE~ 132 (522)
T TIGR03799 56 DFSSAEIPEQPTFVSEHTQFLLDKLVAHSVHTASPSF--IGHMTSALPYFMLPLSK-LMVALNQNLVKIETSKAFTPLER 132 (522)
T ss_pred cccccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCe--EEeccCCCchHHHHHHH-HHHHhcCCcceeecCcchHHHHH
Confidence 34456899999999999998766553 3678987 3555553222 2455 56789999999999999999999
Q ss_pred HHHHHHHHHhCCCCCC--------CCCCCeEEeCChhHHHHHHHHHHHHHHHHHH------HhcCCC-------CCCCeE
Q 018437 99 RCVNMIAHLFNTPVAD--------DKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR------KEQGKP-------YDKPNI 157 (356)
Q Consensus 99 ~~~~~la~l~g~~~~~--------~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~------~~~g~~-------~~~~~v 157 (356)
++.+|++++++..++. ....+|++|+|||+||++|++++|+...+.. ..+|.. ..+..|
T Consensus 133 ~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v 212 (522)
T TIGR03799 133 QVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAI 212 (522)
T ss_pred HHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEE
Confidence 9999999998632210 1235699999999999999999998743211 011111 124589
Q ss_pred EecCCCcchHHHHHHhhCC---eeEEEEecCCccccCHHHHHHHHhh------CceEEEEecCCCcccccCCHHHHHHHH
Q 018437 158 VTGANVQVCWEKFARYFEV---ELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFEDVKLLHDLL 228 (356)
Q Consensus 158 i~s~~~h~s~~~~~~~~G~---~v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~i~~I~~i~ 228 (356)
++|+.+|+|+.++++.+|+ +++.||+|++ ++||+++|+++|++ ++.+|+.++++|.+|++||+++|+++|
T Consensus 213 ~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~-g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~ 291 (522)
T TIGR03799 213 LVSERGHYSLGKAADVLGIGRDNLIAIKTDAN-NRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIA 291 (522)
T ss_pred EECCCchHHHHHHHHHcCCCcccEEEEEeCCC-CcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHH
Confidence 9999999999999999998 6999999875 99999999999963 356677889999999999999999999
Q ss_pred HHhhhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCC
Q 018437 229 TKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYL 307 (356)
Q Consensus 229 ~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~ 307 (356)
+++ ++|+|||+|||++.+ +.++.+..+. ++++||+++|+|||+++|+|||++++|++..+ +.+...+.|+
T Consensus 292 ~~~------g~~lHVDaA~gg~~~--~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~-~~~~~~~~Yl 362 (522)
T TIGR03799 292 QEL------GCHFHVDAAWGGATL--LSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALM-SAIEHHAEYI 362 (522)
T ss_pred HHc------CCeEEEEchhhhHHH--hCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHH-HHhccCcchh
Confidence 999 999999999998765 3444444444 56899999999999999999999999987543 3444456675
Q ss_pred CC----CCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 308 GS----DQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 308 ~~----~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
.. .....+++|||++. ++++|++|+.+|.+|+++++++++++|+||.
T Consensus 363 ~~~~~~d~~~~~legsR~~~-al~lw~aL~~lG~~G~~~ii~~~~~la~~l~ 413 (522)
T TIGR03799 363 LRKGSKDLGSHTLEGSRPGM-AMLVYAGLHIIGRKGYELLIDQSIEKAKYFA 413 (522)
T ss_pred cCCCCCccccceeecCcchH-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 21 11345788999987 6899999999999999999999999999875
No 10
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=100.00 E-value=6.9e-45 Score=361.29 Aligned_cols=314 Identities=16% Similarity=0.177 Sum_probs=245.9
Q ss_pred CCCCCCCCHHHHHHHHHHHhhh----cCCC-CcccccccCCCChH-HHHHHHHHHhcccCCCcccCcchHHHHHHHHHHH
Q 018437 31 KMPDNSMPKEAAYQVINDELML----DGNP-RLNLASFVTTWMEP-ECDKLVMASINKNYVDMDEYPVTTELQNRCVNMI 104 (356)
Q Consensus 31 ~lp~~~~~~~~i~~~~~~~~~~----~~~~-~~~l~~~~~~~~~~-~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~l 104 (356)
.+.+...+.+++++.+.+.+.. +.|| +| ++++.+.+..+ .+.+++...+|.|...++.+|.+..+|+++.+|+
T Consensus 54 ~~~~~~~~~~~~l~~l~~~l~~~sv~~~~P~ry-~ghm~~~~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~l 132 (608)
T TIGR03811 54 SFTKTVNNMKDVLDELSSRLRTESVPWHSAGRY-WGHMNSETLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEF 132 (608)
T ss_pred ccccCccCHHHHHHHHHHHHhcCCCCCCCccce-EEECcCCCCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHH
Confidence 3445556788899988886642 4577 77 44444444444 6778889999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHH-----HHHH---------------------------------
Q 018437 105 AHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQ-----QKRK--------------------------------- 146 (356)
Q Consensus 105 a~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~-----~~~~--------------------------------- 146 (356)
++++|++. .+|++|+|||+||+.|++++|+... +..+
T Consensus 133 a~l~G~~~-----~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~ 207 (608)
T TIGR03811 133 ATLMGYKN-----GWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDE 207 (608)
T ss_pred HHHhCCCC-----CCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhh
Confidence 99999985 5799999999999999999998530 0000
Q ss_pred ------hcCCCCCC-CeEEecCCCcchHHHHHHhhCCe---eEEEEecCCccccCHHHHHHHHhh------CceEEEEec
Q 018437 147 ------EQGKPYDK-PNIVTGANVQVCWEKFARYFEVE---LKEVKLEEGYYVMNPVKAVELVDE------NTICVAAIL 210 (356)
Q Consensus 147 ------~~g~~~~~-~~vi~s~~~h~s~~~~~~~~G~~---v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~~~~ 210 (356)
..|....+ .++++|+..|+|+.|++.++|++ ++.||+|++ ++||+++|+++|++ .+.+|+.+.
T Consensus 208 ~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~-~rmd~~~L~~~I~~~~~~g~p~~~VVata 286 (608)
T TIGR03811 208 IKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSN-YRMDINELEKIIRKLAAEKTPILGVVGVV 286 (608)
T ss_pred hhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCC-CcCCHHHHHHHHHHHHhcCCCeEEEEEEc
Confidence 00001111 26899999999999999999996 899999975 99999999999975 256899999
Q ss_pred CCCcccccCCHHHHHHHHHHhhhccCCCC--cEEEecccccccccccCC------------------------------C
Q 018437 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDT--PIHVDAASGGFIAPFLYP------------------------------D 258 (356)
Q Consensus 211 ~~~~tG~~~~i~~I~~i~~~~~~~~~~~~--~l~vD~a~~~~~~~~~~~------------------------------~ 258 (356)
|+|.+|++|||++|+++|++..+ + ++ |+||||||||++.+.+.+ +
T Consensus 287 GTT~~GaiDpl~eI~~l~~~~~~-~--gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~ 363 (608)
T TIGR03811 287 GSTEEGAVDGIDKIVALRNKLMK-E--GIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISRE 363 (608)
T ss_pred CCcCCcccCCHHHHHHHHHHHHH-c--CCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHh
Confidence 99999999999999999955321 1 65 799999999976321221 1
Q ss_pred Cccccc-CCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCC-------CCccccCCCChhHHHHHHH
Q 018437 259 LEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQ-------PTFTLNFSKGSSQIIAQYY 330 (356)
Q Consensus 259 ~~~~~~-~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~tr~~~~~~~~~~ 330 (356)
.+..++ ++++||+++|+|||+++|++||++++|++.. .+.+...+.|+.... ..++++|||++..++++|.
T Consensus 364 ~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~~~-~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~ 442 (608)
T TIGR03811 364 VYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDIRM-RDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWA 442 (608)
T ss_pred HHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCHHH-HHHHhcCcchhccccccCcccccccceecCCccHHHHHHHH
Confidence 122233 6799999999999999999999999999853 344445677774311 2357899999888999999
Q ss_pred HHHHh--CHHHHHHHHHHHHhccCccc
Q 018437 331 QFIRL--GFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 331 ~l~~l--g~~G~~~~~~~~~~~a~~l~ 355 (356)
+++.+ |.+||++++++++++|++++
T Consensus 443 ~lr~l~~G~~Gyg~~i~~~i~~A~~~~ 469 (608)
T TIGR03811 443 AHKVLPLNVTGYGKLIGASIEGAHRFY 469 (608)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 99998 99999999999999999874
No 11
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=1.9e-44 Score=344.33 Aligned_cols=276 Identities=20% Similarity=0.290 Sum_probs=228.3
Q ss_pred hcCCCCcccccccCCC-C-hHHHHHHHHHHhcccCCCcccCc----chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCC
Q 018437 52 LDGNPRLNLASFVTTW-M-EPECDKLVMASINKNYVDMDEYP----VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVG 125 (356)
Q Consensus 52 ~~~~~~~~l~~~~~~~-~-~~~v~~~i~~~~~~~~~~~~~~~----~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~G 125 (356)
+..+|++++ +|.... . .+.+.+.+ .+..+|.++|...+ .+.++|+++++|+++++|+++++ .+|++|+|
T Consensus 18 ~~~~~~~~~-g~p~~~~~~~~~~~~~~-~~~~~n~gnp~~~~~~g~~~~~~e~~~~~~~a~l~g~~~~~---~~G~~TsG 92 (380)
T PRK02769 18 LRHNQYFNV-GYPEAADFDYSALKRFF-SFSINNCGDPYSKSNYPLNSFDFERDVMNFFAELFKIPFNE---SWGYITNG 92 (380)
T ss_pred HHHhhhccc-CCCchhhcCHHHHHHHH-HhhhccCCCccccCCCCCChHHHHHHHHHHHHHHhCCCCCC---CCEEEecC
Confidence 355677643 333222 2 34444444 44444666766554 57899999999999999998633 57999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhC---
Q 018437 126 SSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN--- 202 (356)
Q Consensus 126 gt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~--- 202 (356)
|||||+++++++|+.. .+++|++|+.+|+|+.++++.+|++.+.||+++ ++++|+++|+++++++
T Consensus 93 gTean~~a~~~ar~~~-----------~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~-~g~id~~~L~~~i~~~~~~ 160 (380)
T PRK02769 93 GTEGNLYGCYLARELF-----------PDGTLYYSKDTHYSVSKIARLLRIKSRVITSLP-NGEIDYDDLISKIKENKNQ 160 (380)
T ss_pred hHHHHHHHHHHHHHhC-----------CCcEEEeCCCceehHHHHHHHcCCCCceeccCC-CCcCcHHHHHHHHHhCCCC
Confidence 9999999999887631 136899999999999999999999999999986 4999999999999886
Q ss_pred ceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCC---CcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCC
Q 018437 203 TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWD---TPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG 279 (356)
Q Consensus 203 ~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~---~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l 279 (356)
|++|+++++||++|++||+++|+++|+++ + +|+|||+||+++.+||.....++++.. ++||+++|+|||+
T Consensus 161 t~lvv~t~gtt~tG~idpi~~I~~i~~~~------g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~-~vDsis~s~HK~~ 233 (380)
T PRK02769 161 PPIIFANIGTTMTGAIDNIKEIQEILKKI------GIDDYYIHADAALSGMILPFVNNPPPFSFAD-GIDSIAISGHKFI 233 (380)
T ss_pred cEEEEEEeCCCCCcccCCHHHHHHHHHHh------CCCceEEEEEecccceeecccCccccCCccC-CCCEEEECCcccC
Confidence 99999999999999999999999999999 8 699999999999999876655677765 8999999999999
Q ss_pred CCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 280 LVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 280 ~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
++|+|||++++|++. + ..+.....|+... +.++.|||++..++++|++|+.+|.+|+++++++++++++||.
T Consensus 234 ~~P~g~G~l~~r~~~-~-~~~~~~~~yl~~~--d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~ 305 (380)
T PRK02769 234 GSPMPCGIVLAKKKY-V-ERISVDVDYIGSR--DQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAV 305 (380)
T ss_pred CCCCCcEEEEEehhh-h-hhcccCccccCCC--CCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999753 2 2333456676653 4567899999889999999999999999999999999999874
No 12
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=3.9e-42 Score=314.95 Aligned_cols=328 Identities=16% Similarity=0.160 Sum_probs=274.2
Q ss_pred ccccccccchhhhhcCCCCCCCCCCCCHHHHHHHHHHHhh---hcCCCCcccccccCCC-ChHHHHHHHHHHhcccCCCc
Q 018437 12 EILSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELM---LDGNPRLNLASFVTTW-MEPECDKLVMASINKNYVDM 87 (356)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~i~~~~~~~~~---~~~~~~~~l~~~~~~~-~~~~v~~~i~~~~~~~~~~~ 87 (356)
.-+.++-.+..++. +-.+++|+++.+.+++++..++.+. ++|||+|. ..+.... +...+.+.+++..|.|...|
T Consensus 56 ~kv~~fhhP~~L~~-l~nlel~~~~esl~qil~~cr~tl~y~vKTgHprff-NQl~~glD~~~Lag~wlT~t~Ntn~~TY 133 (510)
T KOG0629|consen 56 QKVLDFHHPDELKE-LFNLELRDQPESLAQILEDCRDTLKYSVKTGHPRFF-NQLSSGLDPIGLAGEWLTSTANTNMFTY 133 (510)
T ss_pred ceeecccChHHHHH-HhCcccCCChhhHHHHHHHHHHHHHhhhccCCCcch-hhhccCCCHHHHHHHHHHhccCCCCceE
Confidence 44556666666655 4457999999999999999998886 48999982 1111212 23467888999999999999
Q ss_pred ccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCC-eEEecCCCcch
Q 018437 88 DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKP-NIVTGANVQVC 166 (356)
Q Consensus 88 ~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~-~vi~s~~~h~s 166 (356)
+..|.+..+|+++...+.++.|++.. .++++++||+-+|++++.+++.+..++.+..|...-++ .+++|+.+|||
T Consensus 134 EiAPvF~lmE~~vl~km~~ivGw~~~----~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYS 209 (510)
T KOG0629|consen 134 EIAPVFVLMEEEVLAKMREIVGWEEG----GDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYS 209 (510)
T ss_pred EecceEEeehHHHHHHHHHHhCCCCC----CCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhh
Confidence 99999999999999999999999972 45899999999999999999987555544455433233 67789999999
Q ss_pred HHHHHHhhCCe---eEEEEecCCccccCHHHHHHHHhh---C---ceEEEEecCCCcccccCCHHHHHHHHHHhhhccCC
Q 018437 167 WEKFARYFEVE---LKEVKLEEGYYVMNPVKAVELVDE---N---TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGW 237 (356)
Q Consensus 167 ~~~~~~~~G~~---v~~v~~~~~~~~~d~~~L~~~i~~---~---~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~ 237 (356)
+.+++.++|++ ++.|++++. |+|++++||+.|-+ + |.+|.+|+|+|..|++|||+.|+++|++|
T Consensus 210 i~kaAa~lg~gtd~c~~v~t~e~-Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~------ 282 (510)
T KOG0629|consen 210 IKKAAAFLGLGTDHCIKVKTDER-GKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKH------ 282 (510)
T ss_pred HHHHHHHhccCCceeEEeccccc-CccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhc------
Confidence 99999999966 899999985 99999999999853 3 78999999999999999999999999999
Q ss_pred CCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCC-----
Q 018437 238 DTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQ----- 311 (356)
Q Consensus 238 ~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~----- 311 (356)
++|+|||||+||+.+ ++..+++.+. ++++||+++++||++++|..||.+++|...++..+.+.++.|+...+
T Consensus 283 ~lWmHvDAAwGGglL--mS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~Ydv 360 (510)
T KOG0629|consen 283 KLWMHVDAAWGGGLL--MSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDV 360 (510)
T ss_pred CEEEEeecccccccc--cChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeec
Confidence 999999999999887 7777777776 88999999999999999999999999988877777667777776543
Q ss_pred ----CCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 312 ----PTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 312 ----~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
.+..++|-|... ++++|..|+.-|.+|+++.+++++++|+||.
T Consensus 361 S~DTgdK~iQCGRh~D-~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~ 407 (510)
T KOG0629|consen 361 SYDTGDKAIQCGRHVD-VFKLWLMWKAKGTQGFEAQVDKCLRLAEYLY 407 (510)
T ss_pred ccccccchhhcCcccc-HHHHHHHHHhcccccHHHHHHHHHHHHHHHH
Confidence 234577887675 9999999999999999999999999999985
No 13
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-36 Score=280.58 Aligned_cols=328 Identities=17% Similarity=0.226 Sum_probs=271.7
Q ss_pred ccccccchhhhhcCCCCCCCCCCCCHHHHHHHHHHHhh----hcCCCCcccccccCCCC--hHHHHHHHHHHhcccCCCc
Q 018437 14 LSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELM----LDGNPRLNLASFVTTWM--EPECDKLVMASINKNYVDM 87 (356)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~i~~~~~~~~~----~~~~~~~~l~~~~~~~~--~~~v~~~i~~~~~~~~~~~ 87 (356)
+-|=..++|.+..+|. +.|+.+.+.++|++++++++. +|.||+| ++|.|+.. +..+.+++...+..-+..|
T Consensus 29 v~P~v~PGYl~~llP~-~aPe~pE~~~~Il~D~ekiI~PGitHw~hP~f--hAyfpa~~s~~siladmLs~~i~~vGFtW 105 (511)
T KOG0628|consen 29 VLPDVKPGYLRDLLPS-KAPEKPESWEDILGDLEKIIMPGITHWQHPHF--HAYFPAGNSYPSILADMLSGGIGCVGFTW 105 (511)
T ss_pred CCCCCCcchhhhhCCC-CCCCChhhHHHHHHHHHHHccCCCcccCCCce--eeEccCccchHHHHHHHHhccccccccee
Confidence 3344566788888886 779999999999999999886 5889987 45555533 3466777777777667789
Q ss_pred ccCcchHHHHHHHHHHHHHHhCCCCCC----CCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCC------CCCeE
Q 018437 88 DEYPVTTELQNRCVNMIAHLFNTPVAD----DKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPY------DKPNI 157 (356)
Q Consensus 88 ~~~~~~~~le~~~~~~la~l~g~~~~~----~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~------~~~~v 157 (356)
..+|..++||..+.+|+++++++|..+ .....|++-..+||+++.+++++|....++.+...+.. .+-.+
T Consensus 106 ~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~ 185 (511)
T KOG0628|consen 106 ASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVA 185 (511)
T ss_pred ecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheE
Confidence 999999999999999999999998643 12456788888899999999999887555433322111 12368
Q ss_pred EecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhC------ceEEEEecCCCcccccCCHHHHHHHHHHh
Q 018437 158 VTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN------TICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (356)
Q Consensus 158 i~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~------~~~v~~~~~~~~tG~~~~i~~I~~i~~~~ 231 (356)
++|+.+|.|+++++...|++.+.++.|+ ++.|+.+.|+++|.++ |.+|++|.|+|.+-++|++++|..+|+++
T Consensus 186 Y~SDqahssveka~~i~~VklR~l~td~-n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~~~ 264 (511)
T KOG0628|consen 186 YCSDQAHSSVEKACLIAGVKLRALPTDE-NFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCREE 264 (511)
T ss_pred EecCcccchHHHhHhhcceeEEEeeccc-CcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcchhhhc
Confidence 8999999999999999999999999998 5999999999999874 78999999999999999999999999999
Q ss_pred hhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCC
Q 018437 232 NEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSD 310 (356)
Q Consensus 232 ~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~ 310 (356)
++|||||+||+|... .+++.+..++ ++.+||+.+++|||+++-..|+.+++|++..+...+..++.|+.+.
T Consensus 265 ------glWLHVDAAYAGsa~--iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~ 336 (511)
T KOG0628|consen 265 ------GLWLHVDAAYAGSAF--ICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHA 336 (511)
T ss_pred ------CEEEEeehhhccccc--cCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcch
Confidence 999999999998554 7777665555 7899999999999999999999999999877766676777787765
Q ss_pred C----C---CccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 311 Q----P---TFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 311 ~----~---~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
. . -+.++.+|..+ ++++|..++.+|.+++++.++++.++|+.+
T Consensus 337 ~~~~~~Dyrhwqipl~rRfR-SLKlWfv~R~~Gve~lq~~iR~h~~La~~f 386 (511)
T KOG0628|consen 337 YQGSAPDYRHWQIPLGRRFR-SLKLWFVLRSYGVENLQNYIREHVRLAKEF 386 (511)
T ss_pred hhccCCCccccccccccchh-hHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 2 1 12356788787 999999999999999999999999998765
No 14
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=100.00 E-value=1.9e-33 Score=269.42 Aligned_cols=295 Identities=28% Similarity=0.383 Sum_probs=233.2
Q ss_pred CCHHHHHHHHHHHhhhcCCCCcccccccCCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCC
Q 018437 37 MPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDK 116 (356)
Q Consensus 37 ~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~ 116 (356)
.++.++++.++.....+-.+. .+.+...+++.|.+.+++.+++..+.+.+..+++...+++++++++++++|++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~---- 76 (371)
T PRK13520 2 LSEEEILEELEEYRSEDLKYE-RILSSMCTEPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPD---- 76 (371)
T ss_pred CCHHHHHHHHHHHHhcCCCHH-HeeeeeecCchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCC----
Confidence 578899999988766543222 123555567778888988888876666655567788888999999999999875
Q ss_pred CCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHH
Q 018437 117 TAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAV 196 (356)
Q Consensus 117 ~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~ 196 (356)
..+++++||++++..++.+++... ...+++|+++..+|+++.+.++..|++++.||++++ +.+|+++|+
T Consensus 77 -~~~~~~~ggt~a~~~a~~~~~~~~---------~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~ 145 (371)
T PRK13520 77 -AYGYITSGGTEANIQAVRAARNLA---------KAEKPNIVVPESAHFSFDKAADMLGVELRRAPLDDD-YRVDVKAVE 145 (371)
T ss_pred -CCeEEecCcHHHHHHHHHHHHhhc---------cCCCceEEecCcchHHHHHHHHHcCceEEEecCCCC-CcCCHHHHH
Confidence 247899999999999988876531 011468999999999999999999999999999864 899999999
Q ss_pred HHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCC
Q 018437 197 ELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGH 276 (356)
Q Consensus 197 ~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~h 276 (356)
+++++++++|++++++|++|.+.|+++|.++|+++ |+++|||++|+++..|+......+++...++|++++++|
T Consensus 146 ~~i~~~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~------g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~ 219 (371)
T PRK13520 146 DLIDDNTIGIVGIAGTTELGQVDPIPELSKIALEN------GIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPH 219 (371)
T ss_pred HHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHc------CCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCc
Confidence 99998888888899999999999999999999999 999999999998877653322224444568999999999
Q ss_pred cCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 277 KYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 277 K~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
||+++|.++|.+++++++.. ..+....+|..+.. .+...|||+...+++++++++.++.+|++++.++..+++++|.
T Consensus 220 K~~~a~~~~G~~~~~~~~~~-~~l~~~~~~~~~~~-~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~ 296 (371)
T PRK13520 220 KMGLAPIPAGGILFRDESYL-DALAVDTPYLTSKK-QATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLA 296 (371)
T ss_pred cccCccCCceEEEEcCHHHH-HhhcccCccccCCC-CcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHH
Confidence 99999999999998765433 22222223443321 2335688988889999999999999999999999999988774
No 15
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=4.2e-33 Score=259.08 Aligned_cols=239 Identities=17% Similarity=0.134 Sum_probs=196.3
Q ss_pred cCCCChHHHHHHHHHHhcccCCCccc----CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHH
Q 018437 64 VTTWMEPECDKLVMASINKNYVDMDE----YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (356)
Q Consensus 64 ~~~~~~~~v~~~i~~~~~~~~~~~~~----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~ 139 (356)
.++++.|.+.+++..++...+++|.. +..+.++-+++++.+++++|+++. .++||+||||+|++++..+..
T Consensus 9 ATTp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~-----eIiFTSG~TEsnNlaI~g~~~ 83 (386)
T COG1104 9 ATTPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPE-----EIIFTSGATESNNLAIKGAAL 83 (386)
T ss_pred ccCCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCC-----eEEEecCCcHHHHHHHHhhHH
Confidence 46788899999999888766666644 236678888999999999999983 499999999999999998544
Q ss_pred HHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhh---CCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCccc
Q 018437 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYF---EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (356)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~---G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG 216 (356)
.+.++ .++.+||+|..+|.++.+.++++ |++|.++|++.+ |.+|+++|+++|+++|.+|.+.+.||.+|
T Consensus 84 a~~~~-------~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~-G~v~~e~L~~al~~~T~LVSim~aNnE~G 155 (386)
T COG1104 84 AYRNA-------QKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSN-GLVDLEQLEEALRPDTILVSIMHANNETG 155 (386)
T ss_pred hhhcc-------cCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCC-CeEcHHHHHHhcCCCceEEEEEecccCee
Confidence 33211 12469999999999999999988 999999999984 99999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCC
Q 018437 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (356)
Q Consensus 217 ~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~ 296 (356)
+++||++|+++|+++ ++++|+|++|+.+-+ +.++...++|.+++|+||+. +|.|+|++++|+...+
T Consensus 156 ~IQpI~ei~~i~k~~------~i~fHvDAvQa~Gki-------pi~~~~~~vD~ls~SaHK~~-GpkGiGaLyv~~~~~~ 221 (386)
T COG1104 156 TIQPIAEIGEICKER------GILFHVDAVQAVGKI-------PIDLEELGVDLLSFSAHKFG-GPKGIGALYVRPGVRL 221 (386)
T ss_pred ecccHHHHHHHHHHc------CCeEEEehhhhcCce-------eccccccCcceEEeehhhcc-CCCceEEEEECCCCcc
Confidence 999999999999999 999999999987655 46666667999999999985 9999999999654332
Q ss_pred ccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHh
Q 018437 297 PDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL 335 (356)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~l 335 (356)
.+...++++...--.||-+...++++-.+++.-
T Consensus 222 ------~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a 254 (386)
T COG1104 222 ------EPLIHGGGQERGLRSGTENVPGIVGFGKAAEIA 254 (386)
T ss_pred ------CceeccCcCCCCCCCCCccHHHHHHHHHHHHHH
Confidence 234455555433345888888777777666654
No 16
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=100.00 E-value=3.6e-33 Score=264.90 Aligned_cols=251 Identities=35% Similarity=0.443 Sum_probs=206.8
Q ss_pred ccccCCCCh-HHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHH
Q 018437 61 ASFVTTWME-PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (356)
Q Consensus 61 ~~~~~~~~~-~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~ 139 (356)
+++.+++.+ ..+.+.+...+|.+...|..+++..++|+++++|+++++|++.. ...+++|+|||+||++++++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~---~~~~~~t~ggt~a~~~al~~~~~ 79 (345)
T cd06450 3 AGFVTTMDPPALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSE---DADGVFTSGGSESNLLALLAARD 79 (345)
T ss_pred ccccCCCcHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCC---CCCEEEeCChhHHHHHHHHHHHH
Confidence 344444433 47888999999887777888999999999999999999999721 23589999999999999999987
Q ss_pred HHHHHHHhcCC-CCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh------CceEEEEecCC
Q 018437 140 KWQQKRKEQGK-PYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGS 212 (356)
Q Consensus 140 ~~~~~~~~~g~-~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~~~~~~ 212 (356)
++.++++..+. ...+++|+++.++|+++.++++.+|++++.||++++ +.+|+++|++++++ ++++|++++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~ 158 (345)
T cd06450 80 RARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDED-GRMDPEALEAAIDEDKAEGLNPIMVVATAGT 158 (345)
T ss_pred HhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCC-CCcCHHHHHHHHHHHHHCCCCcEEEEEeccc
Confidence 54332221111 122358999999999999999999999999999875 79999999999987 78899999999
Q ss_pred CcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 213 TLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 213 ~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
|++|.++|+++|+++|+++ ++|+|+|+||+.+..++..... ......++|++++++|||+++|.|+|+++++
T Consensus 159 ~~tG~~~~~~~i~~~~~~~------~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~- 230 (345)
T cd06450 159 TDTGAIDPLEEIADLAEKY------DLWLHVDAAYGGFLLPFPEPRH-LDFGIERVDSISVDPHKYGLVPLGCSAVLVR- 230 (345)
T ss_pred CCCCCCCCHHHHHHHHHHh------CCeEEEechhhHHHhhChhhHH-HhcCccccCEEEEchhHhhCCCcchHHHHHH-
Confidence 9999999999999999999 9999999999988764321111 1223458999999999999999999998764
Q ss_pred CCCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 293 KDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
++++|++++.++.+|++++.++..++++||.
T Consensus 231 --------------------------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~ 261 (345)
T cd06450 231 --------------------------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLA 261 (345)
T ss_pred --------------------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 7788999999999999999999999998874
No 17
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=100.00 E-value=2.8e-31 Score=254.65 Aligned_cols=295 Identities=28% Similarity=0.384 Sum_probs=224.6
Q ss_pred CHHHHHHHHHHHhhh---cCCCCcccccccCCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCC
Q 018437 38 PKEAAYQVINDELML---DGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVAD 114 (356)
Q Consensus 38 ~~~~i~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~ 114 (356)
+.+++++.+.+++.. .++++. +.++.+ .+.+.+.+++..++..+.+.+..+++...+++++++++++++|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~-- 76 (373)
T TIGR03812 1 SEEEVLEELKEYRSEDLKYSDGRI-LGSMCT-NPHPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPD-- 76 (373)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCcE-EEEEeC-CchHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCC--
Confidence 356778888776542 234443 444444 3445566777667655555555567778889999999999999975
Q ss_pred CCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHH
Q 018437 115 DKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVK 194 (356)
Q Consensus 115 ~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~ 194 (356)
..+++++||++++..++.+++..... ...+++|+++.++|+++.++++..|++++.++++++ +.+|+++
T Consensus 77 ---~~~~~~~g~~~~~~~~~~~~~~~~~~-------~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~-~~~d~~~ 145 (373)
T TIGR03812 77 ---AYGYIVSGGTEANIQAVRAAKNLARE-------EKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDED-YTVDVKD 145 (373)
T ss_pred ---CCeEEeccHHHHHHHHHHHHHHHHhc-------cCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCC-CCcCHHH
Confidence 34788999999999988776542110 012368999999999999999999999999999864 8999999
Q ss_pred HHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccC---CCCcccccCCCceEE
Q 018437 195 AVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY---PDLEWDFRLPLVKSI 271 (356)
Q Consensus 195 L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~---~~~~~~~~~~~~Ds~ 271 (356)
|++++++++..+++++++|++|.++|+++|.++|+++ ++|+|+|+||+++..++.. .....++...++|++
T Consensus 146 l~~~l~~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~------~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~ 219 (373)
T TIGR03812 146 VEDLIDDNTIGIVGIAGTTELGQIDDIEELSKIALEN------GIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSI 219 (373)
T ss_pred HHHHHhhCcEEEEEECCCCCCCccCCHHHHHHHHHHc------CCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEE
Confidence 9999988876666667899999999999999999999 9999999999987766432 112345555689999
Q ss_pred EEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhcc
Q 018437 272 NVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVC 351 (356)
Q Consensus 272 ~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a 351 (356)
++++|||+++|.++|.+++++++.+ +.+....+|..... .....|||+...+++++++++.++.+|++++.++..+++
T Consensus 220 ~~s~~K~~~~~~~~G~~~~~~~~~~-~~l~~~~~~~~~~~-~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~ 297 (373)
T TIGR03812 220 TIDPHKMGLSPIPAGGILFRSKSYL-KYLSVDAPYLTVKK-QATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENT 297 (373)
T ss_pred EECccccCCCcCCceEEEEeCHHHH-hhhcccCcccCCCC-CcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 9999999999999998887765443 22222234443321 233458998888999999999999999999999999999
Q ss_pred Cccc
Q 018437 352 PFLV 355 (356)
Q Consensus 352 ~~l~ 355 (356)
++|.
T Consensus 298 ~~l~ 301 (373)
T TIGR03812 298 RYLV 301 (373)
T ss_pred HHHH
Confidence 8874
No 18
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.98 E-value=1.5e-30 Score=249.82 Aligned_cols=269 Identities=19% Similarity=0.142 Sum_probs=213.4
Q ss_pred CCCcccccccCCCChHHHHHHHHHHhc---ccCC--CcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHH
Q 018437 55 NPRLNLASFVTTWMEPECDKLVMASIN---KNYV--DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEA 129 (356)
Q Consensus 55 ~~~~~l~~~~~~~~~~~v~~~i~~~~~---~~~~--~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a 129 (356)
.+...|.+..++..+..+.+++.+++. .|.+ .+..+....+..+++|+.+++++|+++. ..+++|.|.|++
T Consensus 21 ~~~vylD~aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~----~eIvft~~tT~a 96 (405)
T COG0520 21 KPLVYLDNAATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSS----DEIVFTRGTTEA 96 (405)
T ss_pred CCeEEecCcccccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCC----CeEEEeCChhHH
Confidence 343334444455556788888887763 3333 2233446677888999999999999951 349999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceE
Q 018437 130 IMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTIC 205 (356)
Q Consensus 130 ~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~ 205 (356)
+++...++...+. .+++||++..+|++ |...++..|++++++|+++ ++.+|.+++++.++++|++
T Consensus 97 ln~va~~l~~~~~----------~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~-~g~~~~~~~~~~i~~~Tkl 165 (405)
T COG0520 97 LNLVARGLGRSLK----------PGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDD-DGLLDLDALEKLITPKTKL 165 (405)
T ss_pred HHHHHHHhhhhhc----------CCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCC-CCCcCHHHHHHhcCCCceE
Confidence 9999888754311 15899999999987 6677777899999999995 5999999999999999999
Q ss_pred EEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCe
Q 018437 206 VAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV 285 (356)
Q Consensus 206 v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~ 285 (356)
|.+++.+|.||.+.|+++|+++||++ |++++||++|+.+.. +.|++..++|++++|+|||+++|.|+
T Consensus 166 vais~vSn~tG~~~pv~~I~~la~~~------ga~v~VDaaq~~~h~-------~idv~~l~~Df~afsgHKwl~gP~Gi 232 (405)
T COG0520 166 VALSHVSNVTGTVNPVKEIAELAHEH------GALVLVDAAQAAGHL-------PIDVQELGCDFLAFSGHKWLLGPTGI 232 (405)
T ss_pred EEEECccccccccchHHHHHHHHHHc------CCEEEEECccccCcc-------CCCchhcCCCEEEEcccccccCCCce
Confidence 99999999999999999999999999 999999999997655 57777779999999999999999999
Q ss_pred eEEEEeCCCCCccccccccCCCCCCC---------------CCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhc
Q 018437 286 GWVVWRTKDDLPDELVFHINYLGSDQ---------------PTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKV 350 (356)
Q Consensus 286 g~l~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~ 350 (356)
|+|++|++ .+. .+ .+...++.. +.....||.+...++++-++++.+...|++++.++..++
T Consensus 233 GvLy~r~~-~l~-~l--~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L 308 (405)
T COG0520 233 GVLYVRKE-LLE-EL--EPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHEREL 308 (405)
T ss_pred EEEEEchH-HHh-hc--CCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHH
Confidence 99999864 332 21 111222211 011235899998899999999999999999999999999
Q ss_pred cCccc
Q 018437 351 CPFLV 355 (356)
Q Consensus 351 a~~l~ 355 (356)
++|+.
T Consensus 309 ~~~~~ 313 (405)
T COG0520 309 TEYLL 313 (405)
T ss_pred HHHHH
Confidence 88764
No 19
>PLN02651 cysteine desulfurase
Probab=99.97 E-value=5.8e-29 Score=238.05 Aligned_cols=257 Identities=16% Similarity=0.104 Sum_probs=198.3
Q ss_pred CCCChHHHHHHHHHHhcccCCCccc-----CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASINKNYVDMDE-----YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~~~~~~~-----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~ 139 (356)
++++++.+.+++.+++.....++.. .....++.+++++.+++++|.+++ .+++|+|+|++++.++.++..
T Consensus 8 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-----~v~~t~~~t~a~~~~l~~~~~ 82 (364)
T PLN02651 8 TTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPK-----EIIFTSGATESNNLAIKGVMH 82 (364)
T ss_pred CCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-----eEEEeCCHHHHHHHHHHHHHH
Confidence 4466678888888776543333322 234566777899999999999862 489999999999999887754
Q ss_pred HHHHHHHhcCCCCCCCeEEecCCCcchHHHHHH---hhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCccc
Q 018437 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEKFAR---YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (356)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~---~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG 216 (356)
... ..+++|+++..+|+++...+. ..|++++.+|++++ +.+|+++|++++++++++|++++++|+||
T Consensus 83 ~~~---------~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~i~~~t~lv~v~~~~n~tG 152 (364)
T PLN02651 83 FYK---------DKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSD-GLVDLDELAAAIRPDTALVSVMAVNNEIG 152 (364)
T ss_pred hcc---------CCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCC-CcCCHHHHHHhcCCCcEEEEEECCCCCce
Confidence 211 124689999999998655443 45889999999864 89999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCC
Q 018437 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (356)
Q Consensus 217 ~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~ 296 (356)
.+.|+++|.++||++ |+++|||++++.+..| +++...++|++++++||| ++|.|+|+++++++...
T Consensus 153 ~~~~l~~I~~~~~~~------g~~~~vD~a~~~g~~~-------~~~~~~~~D~~~~s~hK~-~gp~G~g~l~v~~~~~~ 218 (364)
T PLN02651 153 VIQPVEEIGELCREK------KVLFHTDAAQAVGKIP-------VDVDDLGVDLMSISGHKI-YGPKGVGALYVRRRPRV 218 (364)
T ss_pred ecccHHHHHHHHHHc------CCEEEEEcchhhCCcc-------cCcccCCCCEEEechhhh-CCCCceEEEEEcCCCCC
Confidence 999999999999999 9999999999876653 455556899999999998 69999999999875321
Q ss_pred ccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 297 PDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
. ..+.+.++........||++...++++.++++.+.. +.+++.++..+++++|.
T Consensus 219 --~--l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~l~ 272 (364)
T PLN02651 219 --R--LEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMK-EMDYDEKHMKALRERLL 272 (364)
T ss_pred --C--CCccccCCCccCCccCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHH
Confidence 1 122233333222223689999989999999999865 44777888888777663
No 20
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.96 E-value=1.1e-28 Score=230.39 Aligned_cols=247 Identities=18% Similarity=0.108 Sum_probs=197.4
Q ss_pred cccccCCCChHHHHHHHHHHhcccCCCcccC-c--chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 60 LASFVTTWMEPECDKLVMASINKNYVDMDEY-P--VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 60 l~~~~~~~~~~~v~~~i~~~~~~~~~~~~~~-~--~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
+....+++.++.|.+++..++....++|... . .....-++.|+.+|+++|+++++ ++||+|+||||+++++.
T Consensus 47 ld~~at~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~d-----IiFts~ATEs~Nlvl~~ 121 (428)
T KOG1549|consen 47 LDNQATGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSD-----IVFTSGATESNNLVLKG 121 (428)
T ss_pred EecCcCCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCc-----EEEeCCchHHHHHHHHH
Confidence 4445566778999999998887655555443 2 33333458999999999999843 99999999999999987
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhh---CCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCC
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYF---EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~---G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (356)
....... ..+.+||+...+|.++...++.+ |++|++||++. ++..|++.+++.|+++|++|.+.+.||
T Consensus 122 v~~~~~~--------~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~-~~~~d~~~~~~~i~~~T~lv~I~~Vnn 192 (428)
T KOG1549|consen 122 VARFFGD--------KTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVED-SGLVDISKLREAIRSKTRLVSIMHVNN 192 (428)
T ss_pred hhccccc--------cccceEEEecccCcchhHHHHHHHhcCeEEEEeccCc-cccccHHHHHHhcCCCceEEEEEeccc
Confidence 7543211 11238999999999988777754 89999999984 599999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCC
Q 018437 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 214 ~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~ 293 (356)
.+|++.|+++|+++|++. ++.+|+|+||+-+.. +.|++..++|.+++++|||+ +|+|+|+|++|++
T Consensus 193 ~~gv~~Pv~EI~~icr~~------~v~v~~DaAQavG~i-------~vDV~eln~D~~s~s~HK~y-gp~~iGaLYvr~~ 258 (428)
T KOG1549|consen 193 EIGVLQPVKEIVKICREE------GVQVHVDAAQAVGKI-------PVDVQELNADFLSISAHKIY-GPPGIGALYVRRK 258 (428)
T ss_pred CccccccHHHHHHHhCcC------CcEEEeehhhhcCCc-------cccHHHcCchheeeeccccc-CCCcceEEEEccC
Confidence 999999999999999999 999999999987555 57888789999999999997 5666999999962
Q ss_pred CCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCH
Q 018437 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF 337 (356)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~ 337 (356)
. ..+...+.+.+|++..-...||+....++.+-.+++...+
T Consensus 259 ~---~~~~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~ 299 (428)
T KOG1549|consen 259 R---PRLRVEPPLSGGGQERGLRSGTVATPLAVGLGSAAEFVNK 299 (428)
T ss_pred C---CcccccCcccCCccccccccCCcCchhhhhhHHHHHHHHh
Confidence 1 1223456777777644445688888878888888777643
No 21
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.96 E-value=3.2e-27 Score=233.12 Aligned_cols=296 Identities=11% Similarity=0.037 Sum_probs=209.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhhcCC--CCcccccc-cCCCChHHHHHHHHHH---hcccCCCcc-cCcchHHHHHHHHH
Q 018437 30 FKMPDNSMPKEAAYQVINDELMLDGN--PRLNLASF-VTTWMEPECDKLVMAS---INKNYVDMD-EYPVTTELQNRCVN 102 (356)
Q Consensus 30 ~~lp~~~~~~~~i~~~~~~~~~~~~~--~~~~l~~~-~~~~~~~~v~~~i~~~---~~~~~~~~~-~~~~~~~le~~~~~ 102 (356)
..+|+ +++.+++++++++...+.. ..| ++.+ .....+|.+.+.+.+. .+.++++++ .+++..+++.++++
T Consensus 44 ~~~~~--~se~~~~~~~~~l~~~n~~~~~~~-~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~ 120 (481)
T PRK04366 44 PELPE--VSELEVVRHYTRLSQKNYGVDTGF-YPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQE 120 (481)
T ss_pred CCCCC--CCHHHHHHHHHHHHhcCCCCCcce-ecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHH
Confidence 46777 8999999999988776532 223 3333 2334456777776654 222344443 57789999999999
Q ss_pred HHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEE
Q 018437 103 MIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVK 182 (356)
Q Consensus 103 ~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~ 182 (356)
++++++|++. ..+..++|+.+.+.++.+++..... +| ...+++|+++.++|+++...++..|++++.+|
T Consensus 121 ~la~l~G~~~------~~l~~~~GA~a~~~~l~~~r~~~~~----~G-d~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~ 189 (481)
T PRK04366 121 WLKEITGMDA------VTLQPAAGAHGELTGLLMIRAYHEA----RG-DTKRTEVIVPDSAHGTNPASAAMAGFKVVEIP 189 (481)
T ss_pred HHHHHhCCCc------eEEEeCcHHHHHHHHHHHHHHHhhc----cC-cCCCCEEEEcCCccHhHHHHHHHcCCEEEEee
Confidence 9999999974 1344456666666555443321110 11 01245899999999999999999999999999
Q ss_pred ecCCccccCHHHHHHHHhhCceEEEEecCCCccccc-CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcc
Q 018437 183 LEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEF-EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 261 (356)
Q Consensus 183 ~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~-~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~ 261 (356)
++++ +.+|+++|++++++++++|++++|| ++|.+ +|+++|+++|+++ |+++|||+|+.....+..
T Consensus 190 ~~~~-~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~------gal~iVD~a~~~~~~g~~------ 255 (481)
T PRK04366 190 SNED-GLVDLEALKAAVGEDTAALMLTNPN-TLGLFERNILEIAEIVHEA------GGLLYYDGANLNAILGKA------ 255 (481)
T ss_pred cCCC-CCcCHHHHHhhcccCCeEEEEeCCC-CccccchHHHHHHHHHHHc------CCEEEEEecChhhhcccC------
Confidence 9764 8999999999999999999999988 89988 5899999999999 999999999865433211
Q ss_pred cccCCCceEEEEcCCcCCCCCcC-----eeEEEEeCCCCCccccccc-c-----CCCCCCC--C--CccccCCCChhHHH
Q 018437 262 DFRLPLVKSINVSGHKYGLVYAG-----VGWVVWRTKDDLPDELVFH-I-----NYLGSDQ--P--TFTLNFSKGSSQII 326 (356)
Q Consensus 262 ~~~~~~~Ds~~~~~hK~l~~P~g-----~g~l~~~~~~~~~~~~~~~-~-----~~~~~~~--~--~~~~~~tr~~~~~~ 326 (356)
+....++|+++.++|||+++|.| +|+++++++ .. +.+... . .|.-..+ . ...-.+|.++..++
T Consensus 256 ~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~-~~-~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~ 333 (481)
T PRK04366 256 RPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEE-LA-PFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLV 333 (481)
T ss_pred CccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhh-hH-hhCCCCeeeccCCceeecccccccCCCcccccCchHHHH
Confidence 12245899999999999987754 468888753 22 121100 0 0000000 0 00112344566789
Q ss_pred HHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 327 AQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 327 ~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
++|.++..+|.+|++++.++++++++||+
T Consensus 334 ~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~ 362 (481)
T PRK04366 334 RAYAYIRSLGAEGLREVSEDAVLNANYLK 362 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999875
No 22
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.96 E-value=8.6e-27 Score=222.11 Aligned_cols=260 Identities=16% Similarity=0.094 Sum_probs=194.3
Q ss_pred CCCChHHHHHHHHHHhcccCCCccc-----CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASINKNYVDMDE-----YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~~~~~~~-----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~ 139 (356)
.+++++.+.+++.+++.....++.. ......+.+++++++++++|++++ .+++|+|+|+++..++.++..
T Consensus 7 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-----~v~~~~g~t~a~~~~l~~l~~ 81 (353)
T TIGR03235 7 TTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTE-----EVIFTSGATESNNLAILGLAR 81 (353)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC-----eEEEeCCHHHHHHHHHHHHHH
Confidence 3456678888888776432223222 123346677899999999999863 389999999999998887754
Q ss_pred HHHHHHHhcCCCCCCCeEEecCCCcchHHHHH---HhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCccc
Q 018437 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA---RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (356)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~---~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG 216 (356)
.. ...+++.|+++..+|+++.... +..|++++.||++++ +.+|+++|++++++++++|++++++|+||
T Consensus 82 ~~--------~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~-~~~d~~~l~~~l~~~~~lv~~~~~~n~tG 152 (353)
T TIGR03235 82 AG--------EQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDES-GRIDVDELADAIRPDTLLVSIMHVNNETG 152 (353)
T ss_pred hc--------ccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCC-CcCCHHHHHHhCCCCCEEEEEEcccCCce
Confidence 21 0111268999999999865554 346999999999864 89999999999988899999999999999
Q ss_pred ccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCC
Q 018437 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (356)
Q Consensus 217 ~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~ 296 (356)
.+.|+++|.++|+++ ++++|+|++++.+..+ .++...++|++++++||| ++|.|+|+++++++...
T Consensus 153 ~~~~~~~I~~l~~~~------~~~~ivD~a~~~g~~~-------~~~~~~~~D~~~~s~~K~-~gp~g~g~l~~~~~~~~ 218 (353)
T TIGR03235 153 SIQPIREIAEVLEAH------EAFFHVDAAQVVGKIT-------VDLSADRIDLISCSGHKI-YGPKGIGALVIRKRGKP 218 (353)
T ss_pred eccCHHHHHHHHHHc------CCEEEEEchhhcCCcc-------ccccccCCCEEEeehhhc-CCCCceEEEEEccCccc
Confidence 999999999999999 9999999998876553 344455899999999998 58999999999875321
Q ss_pred ccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 297 PDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
... ..+.+.++........||.+...++++.++++.+ .+|.+++.++..+++++|.
T Consensus 219 ~~~--~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~ 274 (353)
T TIGR03235 219 KAP--LKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIA-RRNAQAWEVKLRAMRNQLR 274 (353)
T ss_pred ccc--cCceeeCCCCcCccccCCCChHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHH
Confidence 111 1122222222122235788888888888998876 3688888888888877764
No 23
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.95 E-value=2.4e-26 Score=221.10 Aligned_cols=253 Identities=14% Similarity=0.068 Sum_probs=190.0
Q ss_pred CCCChHHHHHHHHHHhcccCCCccc----CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASINKNYVDMDE----YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~~~~~~~----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~ 140 (356)
++++++.+.+++.+++.....++.. ++....+.+++++++++++|+++ ..+++|+|+|+++.+++.++...
T Consensus 8 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~-----~~i~~t~~~t~a~~~al~~~~~~ 82 (379)
T TIGR03402 8 TTRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEP-----DEIIFTSGGTESDNTAIKSALAA 82 (379)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCC-----CeEEEeCcHHHHHHHHHHHHHHh
Confidence 4456678888888776543333322 13446677789999999999975 24899999999999999877532
Q ss_pred HHHHHHhcCCCCCCCeEEecCCCcchHHHHHH---hhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccc
Q 018437 141 WQQKRKEQGKPYDKPNIVTGANVQVCWEKFAR---YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (356)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~---~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~ 217 (356)
.+ .+++|+++..+|+++..... ..|++++.+|++++ +.+|+++|++++++++++|++++++|+||.
T Consensus 83 ~~----------~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~-g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~ 151 (379)
T TIGR03402 83 QP----------EKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEE-GRLDLEELRAAITDDTALVSVMWANNETGT 151 (379)
T ss_pred cC----------CCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCC-CcCCHHHHHHhcCCCcEEEEEEcccCCeee
Confidence 10 13689999999988765444 35999999999764 899999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCc
Q 018437 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (356)
Q Consensus 218 ~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~ 297 (356)
+.|+++|.++|+++ |+++|+|++|+.+.. ++++...++|++++++|| +++|.|+|+++++++..+
T Consensus 152 ~~~~~~I~~l~~~~------g~~vivD~~~~~g~~-------~~~~~~~~~D~~~~s~~K-~~gp~G~g~l~v~~~~~~- 216 (379)
T TIGR03402 152 IFPIEEIGEIAKER------GALFHTDAVQAVGKI-------PIDLKEMNIDMLSLSGHK-LHGPKGVGALYIRKGTRF- 216 (379)
T ss_pred cccHHHHHHHHHHc------CCEEEEECccccccc-------ccCcccCCCCEEEEcHHH-cCCCCceEEEEECCCCCC-
Confidence 99999999999999 999999999986544 345555689999999999 679999999999864321
Q ss_pred cccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 298 DELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
.+.+.++........||.+...++++.++++.+ .++++++.++..+++++|
T Consensus 217 -----~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l 267 (379)
T TIGR03402 217 -----RPLLRGGHQERGRRAGTENVPGIVGLGKAAELA-TEHLEEENTRVRALRDRL 267 (379)
T ss_pred -----CCcccCCccCCCcCCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHH
Confidence 122222221111224788888788888888776 346666666666555554
No 24
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.95 E-value=1.2e-26 Score=242.08 Aligned_cols=288 Identities=12% Similarity=0.059 Sum_probs=207.5
Q ss_pred CCHHHHHHHHHHHhhhcCC---CCcccccccCCCChHHHHHHHH---HHhcccCCCc-ccCcchHHHHHHHHHHHHHHhC
Q 018437 37 MPKEAAYQVINDELMLDGN---PRLNLASFVTTWMEPECDKLVM---ASINKNYVDM-DEYPVTTELQNRCVNMIAHLFN 109 (356)
Q Consensus 37 ~~~~~i~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~v~~~i~---~~~~~~~~~~-~~~~~~~~le~~~~~~la~l~g 109 (356)
.++.+++++++++..++.. ..+.|++ ++....|.+.+.+. ++.+-+++.| +.+++..+++.++.+|+++++|
T Consensus 478 ~sE~e~~r~~~~l~~kn~~~~~~~i~lGs-ct~~~~p~~~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG 556 (954)
T PRK05367 478 HSETEMMRYLRRLEDKDLALDRSMIPLGS-CTMKLNAAAEMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEITG 556 (954)
T ss_pred CCHHHHHHHHHHHHhcCcCcccceeeCCc-CCCcCCHHHHHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHHHC
Confidence 4888999999988776543 2233544 66665565555443 2222244455 4567899999999999999999
Q ss_pred CCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccc
Q 018437 110 TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYV 189 (356)
Q Consensus 110 ~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~ 189 (356)
++. ......||+++++.++++++..+.. +|. ..+.+|++|+..|.+....+..+|++++.|+++++ +.
T Consensus 557 ~d~------~sl~~~~ga~ge~agL~a~r~~~~~----~G~-~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~-G~ 624 (954)
T PRK05367 557 YDA------VSLQPNAGAQGEYAGLLAIRAYHES----RGE-GHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDEN-GN 624 (954)
T ss_pred CCC------EEECccHHHHHHHHHHHHHHHHhhc----cCC-CCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCC-CC
Confidence 974 2344557889998888777654221 121 12357999999999999999999999999999874 89
Q ss_pred cCHHHHHHHHhh---CceEEEEecCCCccccc-CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccC
Q 018437 190 MNPVKAVELVDE---NTICVAAILGSTLTGEF-EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL 265 (356)
Q Consensus 190 ~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~-~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~ 265 (356)
+|+++|++++++ ++.+|++++|++. |.+ +|+++|+++|+++ |+|+|||+|+.+...++..+ ..
T Consensus 625 iD~~~L~~~i~~~~~~la~V~it~pst~-G~~e~~I~eI~~i~h~~------G~~v~VDgA~~~al~~l~~p------g~ 691 (954)
T PRK05367 625 IDLDDLRAKAEEHADNLAAIMITYPSTH-GVFEETIREICEIVHEH------GGQVYLDGANMNAQVGLARP------GD 691 (954)
T ss_pred cCHHHHHHHHhccCCCeEEEEEEcCCCC-eeecCCHHHHHHHHHHc------CCEEEEECcChhhccCCCCh------hh
Confidence 999999999976 4778899999988 654 8999999999999 99999999997655533211 13
Q ss_pred CCceEEEEcCCcCCCCCcC-----eeEEEEeCCCCCccccccccCCCCC--CC-CCccccCCC---ChhHHHHHHHHHHH
Q 018437 266 PLVKSINVSGHKYGLVYAG-----VGWVVWRTKDDLPDELVFHINYLGS--DQ-PTFTLNFSK---GSSQIIAQYYQFIR 334 (356)
Q Consensus 266 ~~~Ds~~~~~hK~l~~P~g-----~g~l~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~tr---~~~~~~~~~~~l~~ 334 (356)
.++|++++|+|||+++|.| +|++++++. +...+. .+..+ .. ...+...+. ++..+...|.+++.
T Consensus 692 ~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~--l~p~lp---g~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~ 766 (954)
T PRK05367 692 IGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAH--LAPFLP---GHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRM 766 (954)
T ss_pred cCCCEEEecCcccCCCCcCCCCCceEEEeeccc--ccccCC---CCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHH
Confidence 4899999999999877765 559998742 222211 11110 00 000111122 23446668999999
Q ss_pred hCHHHHHHHHHHHHhccCccc
Q 018437 335 LGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 335 lg~~G~~~~~~~~~~~a~~l~ 355 (356)
+|.+|++++.++++.+|+|++
T Consensus 767 ~G~~Glr~~a~~~~~~A~Yl~ 787 (954)
T PRK05367 767 MGAEGLRQATEVAILNANYIA 787 (954)
T ss_pred HCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999975
No 25
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.95 E-value=2.3e-26 Score=222.95 Aligned_cols=257 Identities=18% Similarity=0.133 Sum_probs=192.5
Q ss_pred cCCCChHHHHHHHHHHhcccCCCccc-----CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHH
Q 018437 64 VTTWMEPECDKLVMASINKNYVDMDE-----YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFK 138 (356)
Q Consensus 64 ~~~~~~~~v~~~i~~~~~~~~~~~~~-----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~ 138 (356)
.+++.++.+.+++..++.....++.. .....+..+++++.+++++|++++ .+++|+|+|+++..++.++.
T Consensus 11 a~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-----~v~~~~g~t~a~~~~l~~l~ 85 (402)
T TIGR02006 11 ATTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSR-----EIVFTSGATESNNLAIKGIA 85 (402)
T ss_pred cCCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-----eEEEeCCHHHHHHHHHHHHH
Confidence 34566778889887776544333321 112235667889999999999762 38999999999999987765
Q ss_pred HHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHH---hhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcc
Q 018437 139 RKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFAR---YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (356)
Q Consensus 139 ~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~---~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (356)
.... ..+++|+++..+|+++...+. ..|++++.||++++ +.+|+++|++++++++++|++++++|+|
T Consensus 86 ~~~~---------~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~l~~~~~lv~v~~~~n~t 155 (402)
T TIGR02006 86 HFYK---------SKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSN-GLIDLEELKAAIRDDTILVSIMHVNNEI 155 (402)
T ss_pred Hhhc---------CCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCC-CcCCHHHHHHhcCCCCEEEEEECCCcCc
Confidence 3211 124689999999998776654 45999999999864 8999999999999889999999999999
Q ss_pred cccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCC
Q 018437 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (356)
Q Consensus 216 G~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~ 295 (356)
|.+.|+++|.++|+++ |+++|+|++++.+..| +++...++|++++++||+ ++|.|+|+++++++..
T Consensus 156 G~~~~~~~I~~l~~~~------g~~livD~a~a~g~~~-------~~~~~~~~D~~~~s~~K~-~gp~G~G~l~~~~~~~ 221 (402)
T TIGR02006 156 GVIQDIAAIGEICRER------KVFFHVDAAQSVGKIP-------INVNELKVDLMSISGHKI-YGPKGIGALYVRRKPR 221 (402)
T ss_pred eecccHHHHHHHHHHc------CCEEEEEcchhcCCcc-------cCccccCCCEEEEehhhh-cCCCceEEEEEccCCC
Confidence 9999999999999999 9999999999876553 344445899999999996 4799999999986533
Q ss_pred CccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 296 LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
.. . .+.+.++.+......||.+...++++..+++.+- ++++++.++..+++++|
T Consensus 222 ~~-~---~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l 275 (402)
T TIGR02006 222 VR-L---EALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAK-EEMAQDTAHVLALRDRL 275 (402)
T ss_pred CC-C---CceecCCCccCCccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHH
Confidence 21 1 1112222221112347888888888888888764 56777777777777665
No 26
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.95 E-value=1.2e-26 Score=224.02 Aligned_cols=295 Identities=14% Similarity=0.074 Sum_probs=206.3
Q ss_pred hhcCCCCCCCCCCCCHHHHHHHHHHHhhhcCCCCc-ccccccCCCChHHHHH-HHH-HHhcc-cC----C-----Cccc-
Q 018437 24 RAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRL-NLASFVTTWMEPECDK-LVM-ASINK-NY----V-----DMDE- 89 (356)
Q Consensus 24 ~~~~~~~~lp~~~~~~~~i~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~v~~-~i~-~~~~~-~~----~-----~~~~- 89 (356)
+..+..-.+|+.|.+.+.|...+.+...++.+... |.+.+.- +..+.- ++. ..++- +. + +|..
T Consensus 22 ~~~~~~~~~p~~g~~~~~i~~~l~~l~~~~~~~~~~~~~~ger---e~rv~~~~~~~~~~~~~hgigr~~~l~~~q~ka~ 98 (444)
T TIGR03531 22 ERLLEQRKIPEEGWDDETIELFLHELSVMDTNNFPNNVGVGER---EGRVFSKLVARRHYRFCHGIGRSGDLVAPQPKAA 98 (444)
T ss_pred HHHHHcCcCCccCCCHHHHHHHHHHHhcCCcCCCccccCcCcc---cceeechhhhhcccceecCCCCcccccccCcccc
Confidence 44566678999999999999999988766543322 1111111 111222 221 11110 11 0 1111
Q ss_pred -CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChh-HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchH
Q 018437 90 -YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS-EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCW 167 (356)
Q Consensus 90 -~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt-~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~ 167 (356)
++....+.+++..++++++|++. ....++++||| .++.+++.+++.. ...+++||+|..+|.+.
T Consensus 99 gss~~~~l~~~~e~~~~~~~G~~~----~~~a~~v~~~Tg~al~laL~alr~~----------~~~gd~VI~p~~th~S~ 164 (444)
T TIGR03531 99 GSSLLYKLTNKLVKDFLKLLGLRS----IKSAFVVPLATGMSLSLCLSALRHK----------RPKAKYVIWPRIDQKSC 164 (444)
T ss_pred CccHHHHHHHHHHHHHHHHcCCCC----CCEEEEECCHHHHHHHHHHHHcCCc----------CCCCCEEEEECcChHHH
Confidence 22367888899999999999973 12378899999 7888888876531 01246899999999999
Q ss_pred HHHHHhhCCeeEEEEe--cCCccccCHHHHHHHHhh---CceEEEEecCC-CcccccCCHHHHHHHHHHhhhccCCCCcE
Q 018437 168 EKFARYFEVELKEVKL--EEGYYVMNPVKAVELVDE---NTICVAAILGS-TLTGEFEDVKLLHDLLTKKNEETGWDTPI 241 (356)
Q Consensus 168 ~~~~~~~G~~v~~v~~--~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~-~~tG~~~~i~~I~~i~~~~~~~~~~~~~l 241 (356)
.+++.++|+++++||+ +++++.+|+++|+++|++ ++++++++.++ +.+|.++|+++|+++|++| ++|+
T Consensus 165 ~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~------gI~l 238 (444)
T TIGR03531 165 IKAISTAGFEPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANY------DIPH 238 (444)
T ss_pred HHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHc------CCEE
Confidence 9999999999999995 555699999999999986 44555555554 4456899999999999999 9999
Q ss_pred EEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCCCC
Q 018437 242 HVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKG 321 (356)
Q Consensus 242 ~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~ 321 (356)
|+|+|||.+.. +.....+..+...++|++++|+||++.+|.++|++++++++.. +.+ ...|.+. ..
T Consensus 239 IvDaAyg~~~~-~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~-~~i--~~~y~g~----------~~ 304 (444)
T TIGR03531 239 IVNNAYGLQSN-KYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFI-QEI--SKSYPGR----------AS 304 (444)
T ss_pred EEECcCcCcCh-hhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHH-HHH--HHhccCC----------CC
Confidence 99999996332 1111111122233589999999999999999899888776554 221 1123221 12
Q ss_pred hhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 322 SSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 322 ~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
......+|+++..+|.+|+++++++..++++++.
T Consensus 305 ~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~ 338 (444)
T TIGR03531 305 ASPSLDVLITLLSLGSKGYLELLKERKEMYKYLK 338 (444)
T ss_pred ChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 3347889999999999999999999999998764
No 27
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.95 E-value=2.6e-26 Score=220.42 Aligned_cols=258 Identities=16% Similarity=0.089 Sum_probs=193.8
Q ss_pred CChHHHHHHHHHHhcccCCC--cccC---cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVD--MDEY---PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~--~~~~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~ 141 (356)
++++.+.+++.+++..+... +..+ ........++++++++++|.+.. ..+++|+|+++++.+++.+..++
T Consensus 11 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~----~~v~~~~g~t~al~~~~~~~~~~- 85 (376)
T TIGR01977 11 PKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSS----AHVVFTNNATTALNIALKGLLKE- 85 (376)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCC----CeEEEeCCHHHHHHHHHHhccCC-
Confidence 44567788877776543212 1112 23346667888999999998742 24789999999999888764332
Q ss_pred HHHHHhcCCCCCCCeEEecCCCcchHH----HHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccc
Q 018437 142 QQKRKEQGKPYDKPNIVTGANVQVCWE----KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (356)
Q Consensus 142 ~~~~~~~g~~~~~~~vi~s~~~h~s~~----~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~ 217 (356)
+++|+++.++|.++. ..++..|++++.++++++ +.+|+++|++++++++++|++++++|+||.
T Consensus 86 ------------gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~ 152 (376)
T TIGR01977 86 ------------GDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNE-GLISPERIKRAIKTNTKLIVVSHASNVTGT 152 (376)
T ss_pred ------------CCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCC-CCcCHHHHHHhcCCCCeEEEEECCCCCccc
Confidence 578999999998864 345566999999999864 889999999999889999999999999999
Q ss_pred cCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCc
Q 018437 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (356)
Q Consensus 218 ~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~ 297 (356)
+.|+++|.++|+++ ++++++|++++.+..+ +++...++|++++++|||+++|.|+|+++++++..+.
T Consensus 153 ~~~~~~i~~l~~~~------~~~livD~a~~~g~~~-------~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~ 219 (376)
T TIGR01977 153 ILPIEEIGELAQEN------GIFFILDAAQTAGVIP-------IDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLK 219 (376)
T ss_pred cCCHHHHHHHHHHc------CCEEEEEhhhccCccC-------CCchhcCCCEEEecccccccCCCCceEEEEcCCcCcC
Confidence 99999999999999 9999999999876653 3444568999999999999999999999998764321
Q ss_pred cccccccC----CCCC-C-CCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 298 DELVFHIN----YLGS-D-QPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 298 ~~~~~~~~----~~~~-~-~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
........ +... . .......+|.+....++++.+++.+...|++++.+++.++++++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~ 283 (376)
T TIGR01977 220 PLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLL 283 (376)
T ss_pred ceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 11100000 0000 0 000012368888889999999999999999999999988887763
No 28
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.95 E-value=6.4e-26 Score=233.00 Aligned_cols=289 Identities=11% Similarity=0.041 Sum_probs=213.7
Q ss_pred CHHHHHHHHHHHhhhcCCC--Cc-ccccccCCCChHHHHHHHH----HHhcccCCCcc-cCcchHHHHHHHHHHHHHHhC
Q 018437 38 PKEAAYQVINDELMLDGNP--RL-NLASFVTTWMEPECDKLVM----ASINKNYVDMD-EYPVTTELQNRCVNMIAHLFN 109 (356)
Q Consensus 38 ~~~~i~~~~~~~~~~~~~~--~~-~l~~~~~~~~~~~v~~~i~----~~~~~~~~~~~-~~~~~~~le~~~~~~la~l~g 109 (356)
++.+++++++++..++..- .+ .+++ -+...+.+.+.+. ++++-+++.|+ .++++.+++.++.+|+++++|
T Consensus 467 sE~e~~r~~~~L~~kn~~~~~~fi~lGs--ctmk~na~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~eltG 544 (939)
T TIGR00461 467 SETEMLRYLHRLESKDLALNNSMIPLGS--CTMKLNATAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSITG 544 (939)
T ss_pred CHHHHHHHHHHHHhcCCCccccCCCCcc--CCCccCHHHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHHHC
Confidence 8899999998887665321 22 2222 2222233444442 34443455555 577899999999999999999
Q ss_pred CCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccc
Q 018437 110 TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYV 189 (356)
Q Consensus 110 ~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~ 189 (356)
++. .+....||+.+...+++++|.++.. +|. ..+.+|++|...|.+....++..|++++.||++++ |.
T Consensus 545 md~------~Sl~p~aGA~gE~agL~aiR~y~~~----rge-~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~-G~ 612 (939)
T TIGR00461 545 FDA------ISLQPNSGAQGEYAGLRVIRSYHES----RGE-NHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQD-GN 612 (939)
T ss_pred CCC------cccCCchHHHHHHHHHHHHHHHHHh----cCC-CCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCC-CC
Confidence 984 3677788999999999988875421 121 22468999999999988889999999999999864 99
Q ss_pred cCHHHHHHHHhh---CceEEEEecCCCcccccCC-HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccC
Q 018437 190 MNPVKAVELVDE---NTICVAAILGSTLTGEFED-VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL 265 (356)
Q Consensus 190 ~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~~~-i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~ 265 (356)
+|+++|++++++ ++++|++++||| +|.++| +++|+++|+++ |.++++|+|+.........+ ..
T Consensus 613 iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~------G~~v~VDgAq~~al~~l~~P------g~ 679 (939)
T TIGR00461 613 IDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSF------GGQVYLDGANMNAQVGLTSP------GD 679 (939)
T ss_pred cCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHc------CCEEEEEecChhhCCCCCCc------cc
Confidence 999999999984 899999999999 699977 99999999999 99999999995533311111 24
Q ss_pred CCceEEEEcCCcCCC-----CCcCeeEEEEeCCCCCcccccccc-----CCCCCCCC-Cccc-cCCCChhHHHHHHHHHH
Q 018437 266 PLVKSINVSGHKYGL-----VYAGVGWVVWRTKDDLPDELVFHI-----NYLGSDQP-TFTL-NFSKGSSQIIAQYYQFI 333 (356)
Q Consensus 266 ~~~Ds~~~~~hK~l~-----~P~g~g~l~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~-~~tr~~~~~~~~~~~l~ 333 (356)
.++|++.+|.||+++ +|+|+|++++|+. +...++... ...+..+. ..+. .+++++..++..|++|+
T Consensus 680 ~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~--L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~ 757 (939)
T TIGR00461 680 LGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH--LIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIK 757 (939)
T ss_pred cCCCEEEecCCccCCCCCCCCCCCeEEEEEhhh--chhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHH
Confidence 589999999999988 4556699999853 322222110 00011110 1112 27888888999999999
Q ss_pred HhCHHHHHHHHHHHHhccCccc
Q 018437 334 RLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 334 ~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
.+|.+|+++..+.++.+|+||+
T Consensus 758 ~lG~~GL~~~a~~ailnAnYl~ 779 (939)
T TIGR00461 758 MMGNEGLPKASVVAILNANYMA 779 (939)
T ss_pred HHCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999985
No 29
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.95 E-value=6e-26 Score=219.79 Aligned_cols=263 Identities=18% Similarity=0.120 Sum_probs=194.3
Q ss_pred cccccCCCChHHHHHHHHHHhcccCCCcc-----cCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHH
Q 018437 60 LASFVTTWMEPECDKLVMASINKNYVDMD-----EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (356)
Q Consensus 60 l~~~~~~~~~~~v~~~i~~~~~~~~~~~~-----~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (356)
|.....+++++.+.+++.++++....++. ......+..+++++.+++++|.+.. ..+++|+|+|+++.+++
T Consensus 20 ld~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~----~~i~~t~g~t~~l~~~~ 95 (398)
T TIGR03392 20 LDSAATALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDA----ENIVWTRGTTESINLVA 95 (398)
T ss_pred eeCccccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC----CeEEEeCChHHHHHHHH
Confidence 43444456667888888877653222221 1223455667899999999999521 24889999999999998
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEec
Q 018437 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAIL 210 (356)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~ 210 (356)
.++.... -..+++|++++++|++ +...++..|++++.+|++++ +.+|+++|+++++++|++|++++
T Consensus 96 ~~~~~~~---------~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~~~~~l~~~i~~~t~lv~i~~ 165 (398)
T TIGR03392 96 QSYARPR---------LQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGAD-LLPDIRQLPELLTPRTRILALGQ 165 (398)
T ss_pred HHhhhcc---------CCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCC-CCcCHHHHHHHhccCceEEEEEC
Confidence 8763210 0124689999999977 45667788999999999864 88999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEE
Q 018437 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (356)
Q Consensus 211 ~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~ 290 (356)
++|+||.+.|+++|.++|+++ |+++++|++|+.+..+ .++...++|.+++|+|| +++|.|+|++++
T Consensus 166 ~~n~tG~~~~~~~i~~~~~~~------~~~~ivD~a~~~~~~~-------~~~~~~~~d~~~~s~~K-~~gp~G~G~l~~ 231 (398)
T TIGR03392 166 MSNVTGGCPDLARAITLAHQY------GAVVVVDGAQGVVHGP-------PDVQALDIDFYAFSGHK-LYGPTGIGVLYG 231 (398)
T ss_pred ccccccccCCHHHHHHHHHHc------CCEEEEEhhhhcCCCC-------CChhhcCCCEEEEeccc-ccCCCceEEEEE
Confidence 999999999999999999999 9999999999754432 33333468999999999 458999999987
Q ss_pred eCCCCCccccccccCCCCCCC---------------CCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 291 RTKDDLPDELVFHINYLGSDQ---------------PTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
+++ .. +.+ ..+.++.. ...-..||++...++++.++++.+...|++++.++..+++++|.
T Consensus 232 ~~~-~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~ 306 (398)
T TIGR03392 232 KTE-LL-EAM---PPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAE 306 (398)
T ss_pred cHH-HH-hhC---CCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 653 22 111 11111110 01112479998889999999999877788888888777776653
No 30
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.95 E-value=3e-26 Score=222.41 Aligned_cols=264 Identities=16% Similarity=0.088 Sum_probs=196.6
Q ss_pred ccccccCCCChHHHHHHHHHHhcccCCC-----cccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHH
Q 018437 59 NLASFVTTWMEPECDKLVMASINKNYVD-----MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (356)
Q Consensus 59 ~l~~~~~~~~~~~v~~~i~~~~~~~~~~-----~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~a 133 (356)
.|....++++++.+.+++.+++.....+ +..+.......+++++.+++++|..+. ..+++|+|+|+++..+
T Consensus 26 Yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~----~~v~~t~g~t~~l~~~ 101 (406)
T PRK09295 26 YLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSA----EELVFVRGTTEGINLV 101 (406)
T ss_pred EEeCcccccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCC----CeEEEeCCHHHHHHHH
Confidence 3444445566678888888777532211 112334566677899999999998421 2489999999999988
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEe
Q 018437 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAI 209 (356)
Q Consensus 134 l~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~ 209 (356)
+.++.... -..+++|+++.++|++ +...++..|++++.++++++ +.+|+++|++++++++++|+++
T Consensus 102 ~~~~~~~~---------~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~i~~~t~lv~l~ 171 (406)
T PRK09295 102 ANSWGNSN---------VRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPD-GTLQLETLPALFDERTRLLAIT 171 (406)
T ss_pred HHHhhhhc---------CCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCC-CCCCHHHHHHhcCCCcEEEEEe
Confidence 87653210 0124689999999875 45666778999999999864 8999999999999899999999
Q ss_pred cCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEE
Q 018437 210 LGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVV 289 (356)
Q Consensus 210 ~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~ 289 (356)
+++|+||.+.|+++|.++|+++ ++++++|++|+.+.. ++++...++|.+++|+|| +++|.|+|+++
T Consensus 172 ~~~n~tG~~~~~~~i~~~~~~~------~~~vivD~a~~~g~~-------~~~~~~~~~D~~~~s~~K-~~gp~G~G~l~ 237 (406)
T PRK09295 172 HVSNVLGTENPLAEMIALAHQH------GAKVLVDGAQAVMHH-------PVDVQALDCDFYVFSGHK-LYGPTGIGILY 237 (406)
T ss_pred cchhcccccCCHHHHHHHHHHc------CCEEEEEcccccCcc-------ccCchhcCCCEEEeehhh-ccCCCCcEEEE
Confidence 9999999999999999999999 999999999976544 244444579999999999 56899999999
Q ss_pred EeCCCCCccccccccCCCCCC-C---------------CCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCc
Q 018437 290 WRTKDDLPDELVFHINYLGSD-Q---------------PTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPF 353 (356)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~-~---------------~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~ 353 (356)
++++ .+ +.+. ++.++. . ...-..||++...++++..+++.+...|++++.++..+++++
T Consensus 238 ~~~~-~~-~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~ 312 (406)
T PRK09295 238 VKEA-LL-QEMP---PWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHY 312 (406)
T ss_pred EchH-hH-hhCC---CcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 8754 22 1111 111110 0 011135899999999999999999888888888888777776
Q ss_pred cc
Q 018437 354 LV 355 (356)
Q Consensus 354 l~ 355 (356)
|.
T Consensus 313 l~ 314 (406)
T PRK09295 313 AL 314 (406)
T ss_pred HH
Confidence 53
No 31
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.95 E-value=1.1e-25 Score=218.04 Aligned_cols=261 Identities=18% Similarity=0.108 Sum_probs=194.3
Q ss_pred cccccCCCChHHHHHHHHHHhcccCCCccc-----CcchHHHHHHHHHHHHHHhCC-CCCCCCCCCeEEeCChhHHHHHH
Q 018437 60 LASFVTTWMEPECDKLVMASINKNYVDMDE-----YPVTTELQNRCVNMIAHLFNT-PVADDKTAVGVGTVGSSEAIMLA 133 (356)
Q Consensus 60 l~~~~~~~~~~~v~~~i~~~~~~~~~~~~~-----~~~~~~le~~~~~~la~l~g~-~~~~~~~~~~~~t~Ggt~a~~~a 133 (356)
|.....+++++.+.+++.+++.....++.. +....+..+++++.+++++|+ ++ ..+++|+|+|+++..+
T Consensus 23 ld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-----~~i~~~~~~t~~i~~~ 97 (401)
T PRK10874 23 LDSAATALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDA-----KNIVWTRGTTESINLV 97 (401)
T ss_pred EeCCcccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCC-----CEEEEECCHHHHHHHH
Confidence 434444556678888888877643323211 234566777899999999999 44 3488999999999998
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEe
Q 018437 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAI 209 (356)
Q Consensus 134 l~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~ 209 (356)
+.++.... -..+++|++++++|++ +...++..|++++.+|++.+ +.+|+++++++++++|++|+++
T Consensus 98 ~~~~~~~~---------~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~i~~~t~lv~i~ 167 (401)
T PRK10874 98 AQSYARPR---------LQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGAD-RLPDVDLLPELITPRTRILALG 167 (401)
T ss_pred HHHhhhcc---------CCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCC-CcCCHHHHHHhcCcCcEEEEEe
Confidence 88763210 0125799999999976 55667788999999999764 8999999999999999999999
Q ss_pred cCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEE
Q 018437 210 LGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVV 289 (356)
Q Consensus 210 ~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~ 289 (356)
+++|+||.+.|+++|.++|+++ |+++++|++|+.+..| .++...++|.++.++|| +++|.|+|+++
T Consensus 168 ~~~n~tG~~~~~~~i~~l~~~~------g~~~ivD~a~~~g~~~-------~~~~~~~~d~~~~s~~K-~~gp~G~G~l~ 233 (401)
T PRK10874 168 QMSNVTGGCPDLARAITLAHQA------GMVVMVDGAQGAVHFP-------ADVQALDIDFYAFSGHK-LYGPTGIGVLY 233 (401)
T ss_pred CCcccccCcCCHHHHHHHHHHc------CCEEEEECCccccccc-------CCchhcCCCEEEEeccc-ccCCCccEEEE
Confidence 9999999999999999999999 9999999999754442 33333469999999999 46899999999
Q ss_pred EeCCCCCccccccccCCCCCC---------------CCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 290 WRTKDDLPDELVFHINYLGSD---------------QPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
++++ ... .+ .++.++. .......||++....+++..+++.+...|+.++.++..+++++|
T Consensus 234 ~~~~-~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l 308 (401)
T PRK10874 234 GKSE-LLE-AM---SPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLA 308 (401)
T ss_pred EchH-HHh-cC---CCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 8653 221 11 1111110 00111247888888999999999888888887777777776655
No 32
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.94 E-value=2.9e-25 Score=212.98 Aligned_cols=258 Identities=17% Similarity=0.090 Sum_probs=190.5
Q ss_pred CCChHHHHHHHHHHhcccCCCc-----ccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHH
Q 018437 66 TWMEPECDKLVMASINKNYVDM-----DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (356)
Q Consensus 66 ~~~~~~v~~~i~~~~~~~~~~~-----~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~ 140 (356)
+++++.+.+++.+.+......+ ..++...+...++++.+++++|.+.. ..+++|+|+|+++.+++.++...
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~----~~v~~~~g~t~a~~~~~~~l~~~ 84 (373)
T cd06453 9 SQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSP----DEIIFTRNTTEAINLVAYGLGRA 84 (373)
T ss_pred cCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCC----CeEEEeCCHHHHHHHHHHHhhhc
Confidence 3455677777766654322222 22345567777899999999999721 34789999999999999887541
Q ss_pred HHHHHHhcCCCCCCCeEEecCCCcchH----HHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCccc
Q 018437 141 WQQKRKEQGKPYDKPNIVTGANVQVCW----EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (356)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~s~~~h~s~----~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG 216 (356)
...+++|+++.++|++. ...++..|++++.|+++. ++.+|+++|++++++++++|++++++|+||
T Consensus 85 ----------~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG 153 (373)
T cd06453 85 ----------NKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDD-DGQLDLEALEKLLTERTKLVAVTHVSNVLG 153 (373)
T ss_pred ----------CCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCC-CCCcCHHHHHHHhcCCceEEEEeCcccccC
Confidence 00257899999999884 445567899999999986 489999999999998999999999999999
Q ss_pred ccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCC
Q 018437 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (356)
Q Consensus 217 ~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~ 296 (356)
.+.|+++|.++|+++ ++++|+|++++.+..+ +++...++|++++++|||+++ .|+|+++++++ ..
T Consensus 154 ~~~~~~~i~~~~~~~------~~~li~D~a~~~~~~~-------~~~~~~~~d~~~~s~~K~~~~-~g~g~~~~~~~-~~ 218 (373)
T cd06453 154 TINPVKEIGEIAHEA------GVPVLVDGAQSAGHMP-------VDVQDLGCDFLAFSGHKMLGP-TGIGVLYGKEE-LL 218 (373)
T ss_pred CcCCHHHHHHHHHHc------CCEEEEEhhhhcCcee-------eeccccCCCEEEeccccccCC-CCcEEEEEchH-Hh
Confidence 999999999999999 9999999999765543 233334789999999999865 88999988653 22
Q ss_pred cccccc-ccCCC--------CCC---CCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 297 PDELVF-HINYL--------GSD---QPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 297 ~~~~~~-~~~~~--------~~~---~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
. .+.. ...+. ... .......+|.+....++++.+++.+..+|++++.++..++++|+
T Consensus 219 ~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l 287 (373)
T cd06453 219 E-EMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYA 287 (373)
T ss_pred h-cCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 1 1110 00000 000 00001136777778899999999999889988888888887775
No 33
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.94 E-value=8.1e-25 Score=210.74 Aligned_cols=255 Identities=16% Similarity=0.106 Sum_probs=182.3
Q ss_pred CCCChHHHHHHHHHHhcccCCCccc---C--cchHHHHHHHHHHHHHHhCC-CCCCCCCCCeEEeCChhHHHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASINKNYVDMDE---Y--PVTTELQNRCVNMIAHLFNT-PVADDKTAVGVGTVGSSEAIMLAGLAFK 138 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~~~~~~~---~--~~~~~le~~~~~~la~l~g~-~~~~~~~~~~~~t~Ggt~a~~~al~~~~ 138 (356)
++++++.+.+++..+++....++.. + +....++ +.++.+++.+|+ ++ ..+++|+|+|+++.+++.++.
T Consensus 8 ~~~~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~a~~~~~~~~~~~~~-----~~i~~t~g~teal~~~~~~~~ 81 (382)
T TIGR03403 8 TTMLDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIA-EALDKLYKGINARDL-----DDIIITSCATESNNWVLKGVY 81 (382)
T ss_pred CCCCCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHH-HHHHHHHHHcCcCCC-----CeEEEeCCHHHHHHHHHHHHH
Confidence 4566678999998887653333321 1 1333444 455556666776 33 248999999999999888763
Q ss_pred HHHHHHHHhcCCCCCCCeEEecCCCcchHHHHH---HhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcc
Q 018437 139 RKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA---RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (356)
Q Consensus 139 ~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~---~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (356)
..... ..++++|+++..+|+++.... +..|++++.||++++ +.+|+++|++++++++++|++++++|+|
T Consensus 82 ~~~~~-------~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~-g~~d~~~l~~~i~~~t~lv~~~~~~n~t 153 (382)
T TIGR03403 82 FDEIL-------KGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQ-GTITAEQVREAITEKTALVSVMWANNET 153 (382)
T ss_pred Hhhcc-------cCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCC-CCCCHHHHHHhcccCCeEEEEEcccCCC
Confidence 21000 011357999999998876654 456999999999864 8999999999999899999999999999
Q ss_pred cccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCC
Q 018437 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (356)
Q Consensus 216 G~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~ 295 (356)
|.+.|+++|.++|+++ |+++|+|++++.+..| .++...++|++++|+||| ++|.|+|++++|++..
T Consensus 154 G~~~~~~~I~~la~~~------g~~~ivD~a~~~g~~~-------~~~~~~~~D~~~~s~~K~-~gp~G~g~l~vr~~~~ 219 (382)
T TIGR03403 154 GMIFPIKEIGEICKER------GVLFHTDAVQAIGKIP-------VDVQKAGVDFLSFSAHKF-HGPKGVGGLYIRKGVE 219 (382)
T ss_pred ccccCHHHHHHHHHHc------CCEEEEechhhcCCCc-------cCccccCCCEEEEcchhh-CCCCceEEEEECCCCC
Confidence 9999999999999999 9999999998865442 344455899999999998 5899999999986532
Q ss_pred CccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 296 LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
+ .+.+.++........||.+....+++..+++.+ .+++++..++..+++++|
T Consensus 220 ~------~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l 271 (382)
T TIGR03403 220 L------TPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLA-NEYLDFEKSHVRRLRDRL 271 (382)
T ss_pred C------CCcccCCCCCCCcccCCcChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHH
Confidence 2 111222211111124788887777888888765 345666666666666554
No 34
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.94 E-value=3.1e-25 Score=212.85 Aligned_cols=261 Identities=15% Similarity=0.049 Sum_probs=198.2
Q ss_pred cCCCChHHHHHHHHHHhcccCC-----CcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHH
Q 018437 64 VTTWMEPECDKLVMASINKNYV-----DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFK 138 (356)
Q Consensus 64 ~~~~~~~~v~~~i~~~~~~~~~-----~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~ 138 (356)
.++++++.+.+++.+.+..... .+..+....++.+++++.+++++|++++ ..+++++|+|+++..++.++.
T Consensus 7 ~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~----~~v~~~~~~t~a~~~~~~~l~ 82 (371)
T PF00266_consen 7 GTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPD----EEVVFTSNGTEALNAVASSLL 82 (371)
T ss_dssp SS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTT----EEEEEESSHHHHHHHHHHHHH
T ss_pred CccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccc----cccccccccchhhhhhhhccc
Confidence 3446667888888877653222 2223445678888999999999999862 247899999999999998885
Q ss_pred HHHHHHHHhcCCCCCCCeEEecCCCcchHH----HHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCc
Q 018437 139 RKWQQKRKEQGKPYDKPNIVTGANVQVCWE----KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (356)
Q Consensus 139 ~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~----~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (356)
..+. .+++|+++..+|++.. ..++..|++++.++.+.+ +.+|+++++++|++++++|++++.+|.
T Consensus 83 ~~~~----------~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~-~~~~~~~~~~~l~~~~~lv~~~~~~~~ 151 (371)
T PF00266_consen 83 NPLK----------PGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPG-GSLDLEDLEEALNPDTRLVSISHVENS 151 (371)
T ss_dssp HHGT----------TTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTT-SSCSHHHHHHHHHTTESEEEEESBETT
T ss_pred cccc----------cccccccccccccccccccccccccchhhhcccccccc-chhhhhhhhhhhccccceEEeeccccc
Confidence 4321 1578999999999865 444567999999999875 899999999999999999999999999
Q ss_pred ccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCC
Q 018437 215 TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (356)
Q Consensus 215 tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~ 294 (356)
+|.+.|+++|.++||++ ++++++|++++.+.. ++++...++|.+++++|| +++|.|+|+++++++
T Consensus 152 tG~~~pi~~I~~~~~~~------~~~~~vD~~~~~g~~-------~id~~~~~~D~~~~s~~K-l~gp~G~g~l~v~~~- 216 (371)
T PF00266_consen 152 TGVRNPIEEIAKLAHEY------GALLVVDAAQSAGCV-------PIDLDELGADFLVFSSHK-LGGPPGLGFLYVRPE- 216 (371)
T ss_dssp TTBBSSHHHHHHHHHHT------TSEEEEE-TTTTTTS-------S--TTTTTESEEEEESTS-TTSSSTEEEEEEEHH-
T ss_pred ccEEeeeceehhhhhcc------CCceeEechhccccc-------cccccccccceeeecccc-cCCCCchhhheehhh-
Confidence 99999999999999999 999999999987666 356666689999999999 889999999999874
Q ss_pred CCcccc-ccccCCCCC-----------CCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 295 DLPDEL-VFHINYLGS-----------DQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 295 ~~~~~~-~~~~~~~~~-----------~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
.. +.+ .....+... ........||.+....+++..+++.+...|++++.++..++++++.
T Consensus 217 ~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~ 288 (371)
T PF00266_consen 217 AI-ERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLR 288 (371)
T ss_dssp HH-HHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hh-hccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHH
Confidence 21 111 011111100 0001112479999889999999999988899999999999988764
No 35
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.94 E-value=8e-25 Score=212.21 Aligned_cols=262 Identities=18% Similarity=0.129 Sum_probs=193.1
Q ss_pred cccccCCCChHHHHHHHHHHhcccCCCcc-----cCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHH
Q 018437 60 LASFVTTWMEPECDKLVMASINKNYVDMD-----EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (356)
Q Consensus 60 l~~~~~~~~~~~v~~~i~~~~~~~~~~~~-----~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (356)
|.....+++++.+.+++.+++.....++. .........+++++.+++++|++.. ..+++|+|+|+++..++
T Consensus 22 ld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~----~~v~~~~g~t~~l~~~~ 97 (403)
T TIGR01979 22 LDSAATSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASD----EEIVFTRGTTESINLVA 97 (403)
T ss_pred EeCccccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCC----CeEEEeCCHHHHHHHHH
Confidence 43444445667788888777654322221 1223445666889999999999831 24899999999998888
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEec
Q 018437 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAIL 210 (356)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~ 210 (356)
.++.... -..+++|+++.++|++ +...++..|++++.++++++ +.+|+++|++++++++++|++++
T Consensus 98 ~~~~~~~---------~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~i~~~~~lv~~~~ 167 (403)
T TIGR01979 98 YSWGDSN---------LKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDD-GTLDLDDLEKLLTEKTKLVAITH 167 (403)
T ss_pred HHhhhhc---------CCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCC-CCCCHHHHHHHhccCCeEEEEEc
Confidence 7653210 0125789999999887 34666778999999999864 89999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEE
Q 018437 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (356)
Q Consensus 211 ~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~ 290 (356)
++|+||.+.|+++|.++|+++ |+++|+|++|+.+..+ .++...++|+++.++||++ +|.|+|++++
T Consensus 168 ~~~~tG~~~~~~~i~~~~~~~------~~~~ivD~a~~~g~~~-------~~~~~~~~d~~~~s~~K~~-gp~G~g~l~~ 233 (403)
T TIGR01979 168 VSNVLGTVNPVEEIAKLAHQV------GAKVLVDGAQAVPHMP-------VDVQALDCDFYVFSGHKMY-GPTGIGVLYG 233 (403)
T ss_pred ccccccccCCHHHHHHHHHHc------CCEEEEEchhhcCccc-------cCccccCCCEEEEeccccc-CCCCceEEEE
Confidence 999999999999999999999 9999999999865442 3444447999999999975 7999999998
Q ss_pred eCCCCCccccccccCCCCC-CC--------------CCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 291 RTKDDLPDELVFHINYLGS-DQ--------------PTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~-~~--------------~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
+++ .. +.+. ++..+ .. ......||++....++++.+++.+...|++++.+++.+++++|
T Consensus 234 ~~~-~~-~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l 307 (403)
T TIGR01979 234 KEE-LL-EQMP---PFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYA 307 (403)
T ss_pred chH-HH-hcCC---CeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 753 22 1111 01100 00 0001247888888899999999887778888888888877765
No 36
>PRK14012 cysteine desulfurase; Provisional
Probab=99.94 E-value=1e-24 Score=211.60 Aligned_cols=256 Identities=18% Similarity=0.112 Sum_probs=183.6
Q ss_pred CCCChHHHHHHHHHHhc--ccCCCcccC---c--chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASIN--KNYVDMDEY---P--VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF 137 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~--~~~~~~~~~---~--~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~ 137 (356)
++++++.+.+++.+++. ....++... . ......+++++.+++++|.+++ .+++|+|||+++.+++.++
T Consensus 12 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~-----~v~~~~g~t~al~~~l~~l 86 (404)
T PRK14012 12 TTPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPR-----EIVFTSGATESDNLAIKGA 86 (404)
T ss_pred CCCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcC-----eEEEeCCHHHHHHHHHHHH
Confidence 44666788888887775 333333210 0 1234556788899999999762 3889999999999998877
Q ss_pred HHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHh---hCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCc
Q 018437 138 KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARY---FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (356)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~---~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (356)
...+. ..+++|+++..+|+++...+.. .|++++.|++++ ++.+|+++|++++++++++|++++++|+
T Consensus 87 ~~~~~---------~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~-~g~~d~~~l~~~i~~~t~lv~~~~~~n~ 156 (404)
T PRK14012 87 AHFYQ---------KKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQS-NGIIDLEKLEAAMRDDTILVSIMHVNNE 156 (404)
T ss_pred HHhhc---------CCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCC-CCcCCHHHHHHhcCCCCEEEEEECcCCC
Confidence 53211 1257899999999988665544 499999999986 4899999999999999999999999999
Q ss_pred ccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCC
Q 018437 215 TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (356)
Q Consensus 215 tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~ 294 (356)
||.+.|+++|.++|+++ ++++|+|++++.+..+ .++...++|++++++||+ ++|.|+|+++++++.
T Consensus 157 tG~~~~~~~I~~la~~~------g~~vivD~a~~~g~~~-------~~~~~~~~D~~~~s~~K~-~gp~g~G~l~~~~~~ 222 (404)
T PRK14012 157 IGVIQDIAAIGEICRER------GIIFHVDAAQSVGKVP-------IDLSKLKVDLMSFSAHKI-YGPKGIGALYVRRKP 222 (404)
T ss_pred ccchhhHHHHHHHHHHc------CCEEEEEcchhcCCcc-------cCcccCCCCEEEEehhhc-cCCCceEEEEEecCC
Confidence 99999999999999999 9999999999865542 333344799999999995 578899999998753
Q ss_pred CCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
.. . ..+.+.++........||.+....+++.+++..+ ..++.+..++..++++++
T Consensus 223 ~~-~---~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l 277 (404)
T PRK14012 223 RV-R---LEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIA-KEEMATENERIRALRDRL 277 (404)
T ss_pred CC-C---CCceecCCCccCCccCCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHH
Confidence 32 1 1122223221111123566666666666666654 335555666666666554
No 37
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.94 E-value=4.5e-25 Score=215.36 Aligned_cols=263 Identities=16% Similarity=0.095 Sum_probs=193.9
Q ss_pred cccccCCCChHHHHHHHHHHhcccCCCcc---c--CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHH
Q 018437 60 LASFVTTWMEPECDKLVMASINKNYVDMD---E--YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (356)
Q Consensus 60 l~~~~~~~~~~~v~~~i~~~~~~~~~~~~---~--~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (356)
|....++++++.+.+++.+++.....++. . +.......+++++.+++++|++.+ ..+++|+|+|+++..++
T Consensus 36 Ld~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~----~~v~~t~g~t~al~~i~ 111 (424)
T PLN02855 36 LDNAATSQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTS----REIVFTRNATEAINLVA 111 (424)
T ss_pred eeCccccCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCC----CEEEEeCCHHHHHHHHH
Confidence 44444555667788888777653322211 1 123344556889999999999631 24899999999998887
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEec
Q 018437 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAIL 210 (356)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~ 210 (356)
.++.... -..+++|+++.++|++ +...++..|++++.++++++ +.+|+++|++++++++++|++++
T Consensus 112 ~~~~~~~---------~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~-~~~~~~~l~~~i~~~t~lv~i~~ 181 (424)
T PLN02855 112 YTWGLAN---------LKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPD-EVLDVEQLKELLSEKTKLVATHH 181 (424)
T ss_pred HHhhhhc---------CCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCC-CCcCHHHHHHHhccCceEEEEeC
Confidence 6542100 0114689999998876 45566778999999999864 67999999999998999999999
Q ss_pred CCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEE
Q 018437 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (356)
Q Consensus 211 ~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~ 290 (356)
++|+||.+.|+++|.++|+++ ++++++|++|+.+.. ++++...++|.++.++||+ ++|.|+|++++
T Consensus 182 ~~n~tG~~~~~~~I~~l~~~~------g~~vivD~a~~~g~~-------~~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~ 247 (424)
T PLN02855 182 VSNVLGSILPVEDIVHWAHAV------GAKVLVDACQSVPHM-------PVDVQTLGADFLVASSHKM-CGPTGIGFLWG 247 (424)
T ss_pred ccccccccCCHHHHHHHHHHc------CCEEEEEhhhhcCCc-------CCCchhcCCCEEEeecccc-cCCCccEEEEE
Confidence 999999999999999999999 999999999975433 2444445789999999995 68999999998
Q ss_pred eCCCCCccccccccCCCCCC---------------CCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 291 RTKDDLPDELVFHINYLGSD---------------QPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
+++ .+. .+. ++.++. ....-..||++...++++..+++.+...|++++.++..+++++|+
T Consensus 248 ~~~-~~~-~~~---p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~ 322 (424)
T PLN02855 248 KSD-LLE-SMP---PFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLY 322 (424)
T ss_pred chh-hhh-cCC---CEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 754 321 111 111110 011112588999889999999999888899999888888877763
No 38
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.94 E-value=8.1e-25 Score=215.01 Aligned_cols=305 Identities=14% Similarity=0.104 Sum_probs=210.6
Q ss_pred cccccccccchhhhhcCC-CCCCCCCCCCHHHHHHHHHHHhhhcC----CCCcccccccCCCChH-HHHHHHH--HHhcc
Q 018437 11 REILSSTFASRYVRAAIP-RFKMPDNSMPKEAAYQVINDELMLDG----NPRLNLASFVTTWMEP-ECDKLVM--ASINK 82 (356)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~-~~~lp~~~~~~~~i~~~~~~~~~~~~----~~~~~l~~~~~~~~~~-~v~~~i~--~~~~~ 82 (356)
-++++++|..+|...+.. ..++|+.+ +..++++.+.+....+. +++ +++.+.+....| .+.++.. +.+..
T Consensus 21 ~~~~~~~~~~~p~~~~~~~~~~lp~~~-~~~~v~~~~~~~~~~~~~~~~~~~-~lg~g~~~~~~p~~~~~~~~~~~~~~~ 98 (447)
T PRK00451 21 VKSIDELFADIPEELRLKRPLDLPPGL-SEMELLRHLRELAAKNKTAEEYPS-FLGAGAYDHYIPAVVDHIISRSEFYTA 98 (447)
T ss_pred CCCHHHHHHhCCHHHHhCCCCCCCCCC-CHHHHHHHHHHHHhcCCCcCcCcc-cCcccccCCcCcHHHHHHHhchhHHHh
Confidence 467889998888755443 35789875 99999999988764332 222 355555544333 3333332 22221
Q ss_pred -cCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecC
Q 018437 83 -NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA 161 (356)
Q Consensus 83 -~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~ 161 (356)
++..++.+++..+...+.++++++++|++. ..+++|+|||+++..++++.+.. .+++|++++
T Consensus 99 y~~~~~~~~~g~~~~~~e~~~~la~l~g~~~-----~~v~~~~g~t~~~~~~~~a~~~~------------~g~~Vlv~~ 161 (447)
T PRK00451 99 YTPYQPEISQGTLQAIFEYQTMICELTGMDV-----ANASMYDGATALAEAALMAVRIT------------KRKKVLVSG 161 (447)
T ss_pred cCCCCCccchHHHHHHHHHHHHHHHHhCCCc-----ceEEecCcHHHHHHHHHHHHHhc------------CCCEEEEeC
Confidence 233334467788888888899999999986 24789999998877776665321 147899999
Q ss_pred CCcchHHHHHHh----hCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCC
Q 018437 162 NVQVCWEKFARY----FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGW 237 (356)
Q Consensus 162 ~~h~s~~~~~~~----~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~ 237 (356)
++|+++..+++. .|++++.+|+++ + .+|+++|++++++++++|+++++ |+||.++|+++|.++|+++
T Consensus 162 ~~~~~~~~~~~~~~~~~G~~~~~v~~~~-~-~~d~~~l~~~i~~~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~------ 232 (447)
T PRK00451 162 AVHPEYREVLKTYLKGQGIEVVEVPYED-G-VTDLEALEAAVDDDTAAVVVQYP-NFFGVIEDLEEIAEIAHAG------ 232 (447)
T ss_pred ccCHHHHHHHHHHHHhCCcEEEEecCCC-C-CCCHHHHHHhcCCCeEEEEEECC-CCCCeeCCHHHHHHHHHHC------
Confidence 999998887765 589999999986 4 99999999999999999999998 8899999999999999999
Q ss_pred CCcEEE--ecccccccccccCCCCcccccCCCceEEEEcCCcC----CCCCcCeeEEEEeCCCCCccccccc--------
Q 018437 238 DTPIHV--DAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKY----GLVYAGVGWVVWRTKDDLPDELVFH-------- 303 (356)
Q Consensus 238 ~~~l~v--D~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~----l~~P~g~g~l~~~~~~~~~~~~~~~-------- 303 (356)
|+|+++ |....+.+. .....++|.++.++||| .++++|+|+++++++ ... .+...
T Consensus 233 ~~~~iv~~d~~~~g~~~---------~~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~-~~~-~~~~~~~g~~~~~ 301 (447)
T PRK00451 233 GALFIVGVDPVSLGLLK---------PPGEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKK-LVR-QMPGRLVGETVDA 301 (447)
T ss_pred CCEEEEEcChHHhccCC---------CcccCCCCEEEECCCcCCCCCCCCCCCchHHHhhHH-HHh-hCCCCEeeeeccc
Confidence 999998 644322111 01234889999999997 234458999988653 221 11000
Q ss_pred ---cCCC----------CCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 304 ---INYL----------GSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 304 ---~~~~----------~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
..|. .....+ ...+++....+++.+.+++.++.+|++++.++..+++++|+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~ 365 (447)
T PRK00451 302 DGKRGFVLTLQAREQHIRREKAT-SNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLA 365 (447)
T ss_pred CCCeeeEeecccccccccccccc-ccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Confidence 0000 000000 01133333334666667888999999999999999888764
No 39
>PRK02948 cysteine desulfurase; Provisional
Probab=99.93 E-value=3.1e-24 Score=206.56 Aligned_cols=254 Identities=15% Similarity=0.082 Sum_probs=187.2
Q ss_pred CCCChHHHHHHHHHHhcccCCCcc----cCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASINKNYVDMD----EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~~~~~~----~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~ 140 (356)
++++++.+.+++.+++.....++. .+.....+.+++++.+++++|+++ ..+++|+|+++++..++.++...
T Consensus 9 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~-----~~i~~~~g~t~a~~~~~~~~~~~ 83 (381)
T PRK02948 9 TTPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEE-----QGIYFTSGGTESNYLAIQSLLNA 83 (381)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCC-----CeEEEeCcHHHHHHHHHHHHHHh
Confidence 446667888888777754333322 223445677889999999999976 34889999999999998887642
Q ss_pred HHHHHHhcCCCCCCCeEEecCCCcchHHHH---HHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccc
Q 018437 141 WQQKRKEQGKPYDKPNIVTGANVQVCWEKF---ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (356)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~---~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~ 217 (356)
+. ..+++|+++..+|+++... ++..|++++.+|++++ +.+|+++|++++++++++|++++++|+||.
T Consensus 84 ~~---------~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~ 153 (381)
T PRK02948 84 LP---------QNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKS-GLIRLVDLERAITPDTVLASIQHANSEIGT 153 (381)
T ss_pred cc---------CCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCC-CCCCHHHHHHhcCCCCEEEEEECCcCCcEe
Confidence 10 1246899999999886655 4556999999999864 899999999999888999999999999999
Q ss_pred cCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCc
Q 018437 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (356)
Q Consensus 218 ~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~ 297 (356)
+.|+++|.++|+++ ++++|+|++++.+.. +.++...++|+++.++||+ ++|.|+|+++++++....
T Consensus 154 ~~~~~~I~~l~~~~------~~~vivD~~~~~g~~-------~~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~~~~~~~ 219 (381)
T PRK02948 154 IQPIAEIGALLKKY------NVLFHSDCVQTFGKL-------PIDVFEMGIDSLSVSAHKI-YGPKGVGAVYINPQVRWK 219 (381)
T ss_pred ehhHHHHHHHHHHc------CCEEEEEChhhcccc-------ccCcccCCCCEEEecHHhc-CCCCcEEEEEEcCCCCCC
Confidence 99999999999999 999999988765433 2344445799999999997 479999999987542111
Q ss_pred cccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 298 DELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
.. ..+.........+|.+....+++.++++.+. +++++..++..+++++|
T Consensus 220 ~~------~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l 269 (381)
T PRK02948 220 PV------FPGTTHEKGFRPGTVNVPGIAAFLTAAENIL-KNMQEESLRFKELRSYF 269 (381)
T ss_pred Cc------ccCCCCCCCcCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 10 1111111111346777777888888887653 45677777777666655
No 40
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.93 E-value=1.4e-24 Score=210.17 Aligned_cols=254 Identities=11% Similarity=-0.028 Sum_probs=192.7
Q ss_pred cCCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHH
Q 018437 64 VTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (356)
Q Consensus 64 ~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (356)
.|...++.+.+++...+.. ..++...++.+++++++++++|.+.+ ...+++++||+++..++....++
T Consensus 16 GP~~~~~~V~~a~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~g~~~~----~~vi~~~~gt~a~~~a~~~~~~~--- 83 (401)
T PLN02409 16 GPVNIPERVLRAMNRPNED-----HRSPAFPALTKELLEDVKYIFKTKSG----TPFIFPTTGTGAWESALTNTLSP--- 83 (401)
T ss_pred CCCCCCHHHHHHhcCCCCC-----CCCHHHHHHHHHHHHHHHHHhCCCCC----CEEEEeCCcHHHHHHHHHhcCCC---
Confidence 3444557777777544321 12567788999999999999999752 24788889999988887765332
Q ss_pred HHHhcCCCCCCCeEEecCCCcchH--HHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh----CceEEEEecCCCcccc
Q 018437 144 KRKEQGKPYDKPNIVTGANVQVCW--EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NTICVAAILGSTLTGE 217 (356)
Q Consensus 144 ~~~~~g~~~~~~~vi~s~~~h~s~--~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~----~~~~v~~~~~~~~tG~ 217 (356)
+++|+++.+.|++. ...++..|++++.++.+.+ ..+|+++|++++++ ++++|++++++|+||.
T Consensus 84 ----------Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~-~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~ 152 (401)
T PLN02409 84 ----------GDKVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWG-QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGV 152 (401)
T ss_pred ----------CCEEEEeCCCchhHHHHHHHHHcCCceEEEECCCC-CCCCHHHHHHHHhhCcCCCccEEEEEeecccccc
Confidence 57899999999764 5777888999999999764 46899999999986 7899999999999999
Q ss_pred cCCHHHHHHH--HHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCC
Q 018437 218 FEDVKLLHDL--LTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (356)
Q Consensus 218 ~~~i~~I~~i--~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~ 295 (356)
+.|+++|.++ |+++ |++++||++++.+.. ++++...++|.++.++|||+++|.|+|+++++++ .
T Consensus 153 ~~~~~~i~~l~~~~~~------g~~~vvD~v~s~g~~-------~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~-~ 218 (401)
T PLN02409 153 TNDLAGVRKLLDCAQH------PALLLVDGVSSIGAL-------DFRMDEWGVDVALTGSQKALSLPTGLGIVCASPK-A 218 (401)
T ss_pred cCCHHHHHHHHhhhcc------CcEEEEEcccccCCc-------cccccccCccEEEEcCccccCcCCCcceeEECHH-H
Confidence 9999999999 9999 999999999985444 3454445899999999999999999999998754 2
Q ss_pred Ccccccc---ccCCCCC------CCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 296 LPDELVF---HINYLGS------DQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 296 ~~~~~~~---~~~~~~~------~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
+. .+.. .+.|... ........+|.+....+++..+++.+..+|++++.++..+++++|.
T Consensus 219 ~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~ 286 (401)
T PLN02409 219 LE-ASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATR 286 (401)
T ss_pred HH-HHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 21 1110 0111110 0000011357777778899999999988999999999999888764
No 41
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.93 E-value=4.9e-24 Score=206.22 Aligned_cols=264 Identities=13% Similarity=0.072 Sum_probs=187.3
Q ss_pred cccccCCCChHHHHHHHHHHhcccCCC----cccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHH
Q 018437 60 LASFVTTWMEPECDKLVMASINKNYVD----MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (356)
Q Consensus 60 l~~~~~~~~~~~v~~~i~~~~~~~~~~----~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (356)
|....++++++.+.+++.+++.....+ +....+..++.+++++.+++++|.+.+ .+++++|+++++..++.
T Consensus 21 l~~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~-----~v~~~~~~t~~l~~~~~ 95 (397)
T TIGR01976 21 FDNPAGTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPP-----EVVFGANATSLTFLLSR 95 (397)
T ss_pred ecCCccCCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCC-----eEEEeCCHHHHHHHHHH
Confidence 444445566678888887776532222 222234556778999999999999752 38899999999887776
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHH----HHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecC
Q 018437 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE----KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILG 211 (356)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~----~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~ 211 (356)
++.... ..+++|+++.++|++.. ..++..|++++.++++++++.+|+++|++++++++++|+++++
T Consensus 96 ~~~~~~----------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~~~~lv~i~~~ 165 (397)
T TIGR01976 96 AISRRW----------GPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLSPRTRLVAVTAA 165 (397)
T ss_pred HHHhcC----------CCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcCCCceEEEEeCC
Confidence 653211 12468999999997743 5567789999999998644899999999999988999999999
Q ss_pred CCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 212 STLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 212 ~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
+|++|.+.|+++|.++|+++ |+++++|+++..+.. ..++...++|.++.++|||+ +|. +|+++++
T Consensus 166 ~n~tG~~~~~~~i~~~~~~~------~~~~ivD~a~~~~~~-------~~~~~~~~~d~~~~s~~K~~-g~~-~G~l~~~ 230 (397)
T TIGR01976 166 SNTLGSIVDLAAITELVHAA------GALVVVDAVHYAPHG-------LIDVQATGADFLTCSAYKFF-GPH-MGILWGR 230 (397)
T ss_pred CCCCCccCCHHHHHHHHHHc------CCEEEEehhhhcccc-------CCCHHHcCCCEEEEechhhc-CCc-eEEEEEc
Confidence 99999999999999999999 999999999864322 23444457899999999997 554 8999886
Q ss_pred CCCCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHH--------------HHHHHHHHHhccCcc
Q 018437 292 TKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEE--------------ITFTFISSLKVCPFL 354 (356)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G--------------~~~~~~~~~~~a~~l 354 (356)
++ ....-......|........-..||++...++++..+++.+...| ++++.++..+++++|
T Consensus 231 ~~-~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 306 (397)
T TIGR01976 231 PE-LLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYL 306 (397)
T ss_pred HH-HHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 54 221110011122211111111248898888888888888774443 566666666666554
No 42
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.92 E-value=3.4e-24 Score=204.35 Aligned_cols=251 Identities=14% Similarity=0.109 Sum_probs=187.4
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.++.+.+++.+.+. . ..++...++.+++++.+++++|++.. ...++|.||++++..++.++..+
T Consensus 9 ~~~~~v~~a~~~~~~----~-~~~~~~~~~~~~~~~~la~~~g~~~~----~~~~~~~~~t~al~~~~~~~~~~------ 73 (356)
T cd06451 9 NVPPRVLKAMNRPML----G-HRSPEFLALMDEILEGLRYVFQTENG----LTFLLSGSGTGAMEAALSNLLEP------ 73 (356)
T ss_pred CCCHHHHHHhCCCcc----C-CCCHHHHHHHHHHHHHHHHHhcCCCC----CEEEEecCcHHHHHHHHHHhCCC------
Confidence 445677777754332 1 13455667788999999999999542 23678888999999998876432
Q ss_pred hcCCCCCCCeEEecCCCcch--HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh-CceEEEEecCCCcccccCCHHH
Q 018437 147 EQGKPYDKPNIVTGANVQVC--WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKL 223 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~h~s--~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~i~~ 223 (356)
+++|+++.+.|++ +...++..|++++.+|++++ +.+|++++++++++ ++++|++++++|++|.+.|+++
T Consensus 74 -------g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~ 145 (356)
T cd06451 74 -------GDKVLVGVNGVFGDRWADMAERYGADVDVVEKPWG-EAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEG 145 (356)
T ss_pred -------CCEEEEecCCchhHHHHHHHHHhCCCeEEeecCCC-CCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHH
Confidence 5689998888876 56778889999999999874 89999999999987 8999999999999999999999
Q ss_pred HHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCcccccc-
Q 018437 224 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF- 302 (356)
Q Consensus 224 I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~- 302 (356)
|.++|+++ |+++++|++++.+..+ .++...++|.++.++|||+++|.|+|+++.+++ .. +.+..
T Consensus 146 i~~~a~~~------~~~li~D~~~~~g~~~-------~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~-~~-~~~~~~ 210 (356)
T cd06451 146 IGALAKKH------DALLIVDAVSSLGGEP-------FRMDEWGVDVAYTGSQKALGAPPGLGPIAFSER-AL-ERIKKK 210 (356)
T ss_pred HHHHHHhc------CCEEEEeeehhccCcc-------ccccccCccEEEecCchhccCCCCcceeEECHH-HH-HHHHhc
Confidence 99999999 9999999998654332 222233689999999999999999999998753 22 22111
Q ss_pred --ccCCCCC-------CCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 303 --HINYLGS-------DQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 303 --~~~~~~~-------~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
...|... ....+...+|.+....+++.++++.+...|++++.++..++++++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~ 272 (356)
T cd06451 211 TKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALR 272 (356)
T ss_pred CCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 1111100 0001122355666667788899999888999999998888887764
No 43
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.92 E-value=2.7e-23 Score=216.15 Aligned_cols=286 Identities=10% Similarity=-0.006 Sum_probs=207.0
Q ss_pred CCHHHHHHHHHHHhhhcCC---CCcccccccCCCChHHHHHHHH---HHhcccCCCccc-CcchHHHHHHHHHHHHHHhC
Q 018437 37 MPKEAAYQVINDELMLDGN---PRLNLASFVTTWMEPECDKLVM---ASINKNYVDMDE-YPVTTELQNRCVNMIAHLFN 109 (356)
Q Consensus 37 ~~~~~i~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~v~~~i~---~~~~~~~~~~~~-~~~~~~le~~~~~~la~l~g 109 (356)
.++.++++++..+..++-. .-+.|++ ++=-..|.+.+... .+.+-++..|.. .++..++..++++++++++|
T Consensus 504 ~se~~~~r~~~~l~~~~~~~~~~~~plgs-ctmk~n~~~~~~~~~~~~~~~~hp~~p~~~~~g~~~~~~~~r~~la~i~g 582 (993)
T PLN02414 504 HSEHELLRYLHRLQNKDLSLVHSMIPLGS-CTMKLNATTEMMPVTWPEFANIHPFAPVDQAQGYQEMFEDLGDLLCEITG 582 (993)
T ss_pred cCHHHHHHHHHHHhhcccccccCCccCcc-cccccCchhhhhhhcCcchhhcCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6778999999887665432 1122211 11111233333322 233334554433 56889999999999999999
Q ss_pred CCCCCCCCCCeEEeCChh----HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC
Q 018437 110 TPVADDKTAVGVGTVGSS----EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE 185 (356)
Q Consensus 110 ~~~~~~~~~~~~~t~Ggt----~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~ 185 (356)
++. ++++++++ ++++++++++.+. .|. ..+.+||+|..+|.++...+.+.|++++.||+++
T Consensus 583 ~~~-------v~f~pnaga~ge~a~~~vi~~~~~~-------~Gd-~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d~ 647 (993)
T PLN02414 583 FDS-------FSLQPNAGAAGEYAGLMVIRAYHLS-------RGD-HHRNVCIIPVSAHGTNPASAAMCGMKIVVVGTDA 647 (993)
T ss_pred CCe-------EEEcCCCcHHHHHHHHHHHHHHHhc-------cCC-CCCCEEEeCCCcCccCHHHHHHCCCEEEEeccCC
Confidence 964 88999888 8999988887532 121 1235899999999999999999999999999986
Q ss_pred CccccCHHHHHHHHhh---CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccc
Q 018437 186 GYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD 262 (356)
Q Consensus 186 ~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~ 262 (356)
+ |.+|+++|++++++ ++++|++++|||..|..+|+++|+++|+++ |++++||+|+........ +
T Consensus 648 ~-G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~------Galv~vDgAq~~a~~~l~------~ 714 (993)
T PLN02414 648 K-GNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDN------GGQVYMDGANMNAQVGLT------S 714 (993)
T ss_pred C-CCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHc------CCEEEEEecCHHhccCcC------C
Confidence 4 89999999999984 689999999999999999999999999999 999999999965443211 1
Q ss_pred ccCCCceEEEEcCCcCCCCCc-----CeeEEEEeCCCCCcccccccc-----CCCCCCCCCccccCCCCh------hHHH
Q 018437 263 FRLPLVKSINVSGHKYGLVYA-----GVGWVVWRTKDDLPDELVFHI-----NYLGSDQPTFTLNFSKGS------SQII 326 (356)
Q Consensus 263 ~~~~~~Ds~~~~~hK~l~~P~-----g~g~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~tr~~------~~~~ 326 (356)
....++|.+.++.||++++|. |+|+++++++ +. ..++... .+... ..+ ...||+++ ..+.
T Consensus 715 p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~-L~-p~lPg~~v~~~~~~~~r-~~~-s~iGt~~~a~~g~al~l~ 790 (993)
T PLN02414 715 PGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LA-PFLPSHPVVPTGGIPRP-EKT-QPLGTISAAPWGSALILP 790 (993)
T ss_pred ccccCCCEEEecCCccCCcCcccCCCCeeeEEEchh-hc-ccCCCCccccCCCcccc-cCC-CCcCCccchhhhhHHHHH
Confidence 123589999999999888665 5999998763 22 2221110 01100 011 12367443 5567
Q ss_pred HHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 327 AQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 327 ~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
..|.++..+|.+|+++..++++.+|.|++
T Consensus 791 ~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~ 819 (993)
T PLN02414 791 ISYTYIAMMGSEGLTDASKIAILNANYMA 819 (993)
T ss_pred HHHHHHHHHCHhHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999975
No 44
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.92 E-value=1.7e-23 Score=203.20 Aligned_cols=258 Identities=12% Similarity=-0.001 Sum_probs=179.2
Q ss_pred CCCChHHHHHHHHHHhccc---CC-Cccc-CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASINKN---YV-DMDE-YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~---~~-~~~~-~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~ 139 (356)
.++.++.+.+++..+++.. .. .+.. ......+.++.++ + +++|++++ .+++|+|+|+++..++.++..
T Consensus 36 ~g~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~~-----~v~~~~~~t~~l~~~~~~~~~ 108 (406)
T TIGR01814 36 LGLMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKED-----EVVVMNTLTINLHLLLASFYK 108 (406)
T ss_pred cCcCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCCC-----cEEEeCCchHHHHHHHHHhcC
Confidence 3345667788877665431 11 1111 1122334444433 4 89999863 389999999999998877522
Q ss_pred HHHHHHHhcCCCCCCCeEEecCCCcchHH----HHHHhhCCee----EEEEecCCccccCHHHHHHHHh---hCceEEEE
Q 018437 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWE----KFARYFEVEL----KEVKLEEGYYVMNPVKAVELVD---ENTICVAA 208 (356)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~s~~~h~s~~----~~~~~~G~~v----~~v~~~~~~~~~d~~~L~~~i~---~~~~~v~~ 208 (356)
+ + .++.+|+++..+|++.. ..++..|+++ +.++.+. ++.+|++++++.++ ++|++|++
T Consensus 109 ~--------~--~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~-~g~~~~~~l~~~~~~~~~~t~lv~~ 177 (406)
T TIGR01814 109 P--------T--PKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPRE-EETLRLEDILDTIEKNGDDIAVILL 177 (406)
T ss_pred C--------c--CCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCC-CCccCHHHHHHHHHhcCCCeEEEEE
Confidence 1 0 01247888889998843 3445668887 4566554 37899999998884 67899999
Q ss_pred ecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEE
Q 018437 209 ILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWV 288 (356)
Q Consensus 209 ~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l 288 (356)
+++++.+|.+.|+++|+++|+++ |++++||++|+.+..| +++...++|.+++++|||+++|+| |.+
T Consensus 178 ~~v~~~tG~~~~~~~i~~~~~~~------g~~~~vD~aq~~G~~~-------id~~~~gvD~~~~s~hK~l~g~pG-~~l 243 (406)
T TIGR01814 178 SGVQYYTGQLFDMAAITRAAHAK------GALVGFDLAHAVGNVP-------LDLHDWGVDFACWCTYKYLNAGPG-AGA 243 (406)
T ss_pred eccccccceecCHHHHHHHHHHc------CCEEEEEcccccCCcc-------cccccCCCCEEEEcCccccCCCCC-eEE
Confidence 99999999999999999999999 9999999999987663 455555899999999999987888 656
Q ss_pred EEeCCCCCccccccccCCCCCCC-------------CCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 289 VWRTKDDLPDELVFHINYLGSDQ-------------PTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
+++++... ........|.+... ...-..||++...++++.++++.+...|++++.++..++++||.
T Consensus 244 ~v~~~~~~-~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~ 322 (406)
T TIGR01814 244 FVHEKHAH-TERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLE 322 (406)
T ss_pred EEehhhhh-hcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 65543221 11111112211110 01112478888888999999999988888988888888887763
No 45
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.92 E-value=1.9e-23 Score=201.53 Aligned_cols=191 Identities=16% Similarity=0.051 Sum_probs=155.0
Q ss_pred CChHHHHHHHHHHhcccCCCc-----ccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDM-----DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~-----~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~ 141 (356)
++++.+.+++.++.... .++ ..........+++++.+++++|++. .++++|+++++..++.++..+
T Consensus 31 p~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~~-------~~~~~g~t~a~~~al~~l~~~- 101 (387)
T PRK09331 31 ILTPEARKALIEYGDGY-SVCDYCPGRLDQIKKPPIADFHEDLAEFLGMDE-------ARVTHGAREGKFAVMHSLCKK- 101 (387)
T ss_pred CCCHHHHHHHHHHHhcc-CCCcccccccccccChHHHHHHHHHHHHhCCCc-------EEEeCCHHHHHHHHHHHhcCC-
Confidence 55577888888776421 211 1112223346678888999999974 678999999999998887542
Q ss_pred HHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe--cCCccccCHHHHHHHHhh-------CceEEEEecCC
Q 018437 142 QQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL--EEGYYVMNPVKAVELVDE-------NTICVAAILGS 212 (356)
Q Consensus 142 ~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~--~~~~~~~d~~~L~~~i~~-------~~~~v~~~~~~ 212 (356)
+++|+++..+|++...+++..|++++.+|+ ++ ++.+|+++|++++++ ++++|++++++
T Consensus 102 ------------gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~ 168 (387)
T PRK09331 102 ------------GDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYP-EYKITPEAYAEKIEEVKEETGKPPALALLTHVD 168 (387)
T ss_pred ------------CCEEEECCCchHHHHHHHHHcCCEEEEEeCccCc-CCCcCHHHHHHHHHHhhhccCCCCEEEEEECCC
Confidence 578999999999998889999999999998 54 488999999999963 68899999999
Q ss_pred CcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 213 TLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 213 ~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
+++|.+.|+++|.++|+++ |+++|+|++|+.+..| ++....++|.++.++|||+++|.|+|++++++
T Consensus 169 ~~tG~~~~l~~I~~la~~~------g~~livD~a~~~g~~~-------~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~ 235 (387)
T PRK09331 169 GNYGNLADAKKVAKVAHEY------GIPFLLNGAYTVGRMP-------VDGKKLGADFIVGSGHKSMAASAPSGVLATTE 235 (387)
T ss_pred CCCcccccHHHHHHHHHHc------CCEEEEECCcccCCcC-------CCHHHcCCCEEEeeCcccccCCCCEEEEEECH
Confidence 9999999999999999999 9999999999876553 23333478999999999999999999998864
No 46
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.92 E-value=7.1e-23 Score=198.14 Aligned_cols=279 Identities=15% Similarity=0.070 Sum_probs=189.3
Q ss_pred HHHHHHHHHhhhcC---CCCcccccccCCCChHHH-HHHHHHHhcccCCCccc-----CcchHHHHHHHHHHHHHHhCCC
Q 018437 41 AAYQVINDELMLDG---NPRLNLASFVTTWMEPEC-DKLVMASINKNYVDMDE-----YPVTTELQNRCVNMIAHLFNTP 111 (356)
Q Consensus 41 ~i~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~v-~~~i~~~~~~~~~~~~~-----~~~~~~le~~~~~~la~l~g~~ 111 (356)
+|+++++.....+. .+..+++.+.+.+.+|.+ .++..++ . ....+.. +.+..++.+++++++++++|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~~~~~~~~~-~-~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~ 80 (398)
T cd00613 3 EVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILEN-E-FYTAYTPYQPEISQGRLQALFELQTMLCELTGMD 80 (398)
T ss_pred HHHHHHHHHHhcCcCcccCcccccccccCCcCcHHHHHHhccc-c-CcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCC
Confidence 67787776543322 222456666676665544 4444444 1 1112222 5678899999999999999997
Q ss_pred CCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhC----CeeEEEEecCCc
Q 018437 112 VADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFE----VELKEVKLEEGY 187 (356)
Q Consensus 112 ~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G----~~v~~v~~~~~~ 187 (356)
.+ ...++++|+.+...++.+++.. ..++++|+++++.|.++...+..+| ++++.+|++++
T Consensus 81 ~~-----~v~~~~~g~~~~~~~~~~~~~~----------~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~- 144 (398)
T cd00613 81 VA-----NASLQDEATAAAEAAGLAAIRA----------YHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEG- 144 (398)
T ss_pred cc-----ceeccCchHHHHHHHHHHHHhc----------ccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCC-
Confidence 52 2556665554444444444321 0124789999999999998888887 99999998754
Q ss_pred cccCHHHHHHHHhhCceEEEEecCCCcccccCCH-HHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCC
Q 018437 188 YVMNPVKAVELVDENTICVAAILGSTLTGEFEDV-KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLP 266 (356)
Q Consensus 188 ~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i-~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 266 (356)
+.+|+++|++++.+++++|++++++ ++|.+.|+ ++|.++|+++ |+++|+|++++.+..+ .+....
T Consensus 145 ~~~d~~~l~~~i~~~t~~viv~~~~-~~G~~~~~l~~i~~la~~~------g~~livD~~~~~~~~~-------~~~~~~ 210 (398)
T cd00613 145 GTVDLEALKEEVSEEVAALMVQYPN-TLGVFEDLIKEIADIAHSA------GALVYVDGDNLNLTGL-------KPPGEY 210 (398)
T ss_pred CCcCHHHHHHhcCCCeEEEEEECCC-CCceecchHHHHHHHHHhc------CCEEEEEeccccccCC-------CChHHc
Confidence 7899999999999999999999986 78999885 9999999999 9999999998653331 111123
Q ss_pred CceEEEEcCCcCCCCC-----cCeeEEEEeCCCCCccccccc-cCCCCCC--------------------CCCccccCCC
Q 018437 267 LVKSINVSGHKYGLVY-----AGVGWVVWRTKDDLPDELVFH-INYLGSD--------------------QPTFTLNFSK 320 (356)
Q Consensus 267 ~~Ds~~~~~hK~l~~P-----~g~g~l~~~~~~~~~~~~~~~-~~~~~~~--------------------~~~~~~~~tr 320 (356)
++|+++.++|||+ .| +++|+++++++ .. +.+... ..|.... ..+. ...+.
T Consensus 211 ~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~-~~~~~ 286 (398)
T cd00613 211 GADIVVGNLQKTG-VPHGGGGPGAGFFAVKKE-LV-RFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATS-NICTG 286 (398)
T ss_pred CCCEEEeeccccC-CCCCCCCCceeEEEEhhh-hH-hhCCCCeeccccccCCCcceEEecccchhhcccccccc-cceec
Confidence 6899999999998 65 56789987643 22 121110 0010000 0000 01233
Q ss_pred ChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 321 GSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 321 ~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
.......+|.+++.++.+|++++.++..++++||.
T Consensus 287 ~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~ 321 (398)
T cd00613 287 QALLALMAAMYIVYLGPEGLKEIAERAHLNANYLA 321 (398)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 34456777888999999999999999999888764
No 47
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.90 E-value=2.1e-22 Score=192.51 Aligned_cols=192 Identities=16% Similarity=0.084 Sum_probs=151.0
Q ss_pred CChHHHHHHHHHHhcccCCCccc-----CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDE-----YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~-----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~ 141 (356)
+..+.+.+++.++.. +.+++.. ........+++++.+++++|++. +++|+|+++++..++.++..+
T Consensus 12 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~-------i~~~~g~t~al~~~l~~~~~~- 82 (361)
T cd06452 12 RLTPEARKALIEWGD-GYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGMDE-------ARVTPGAREGKFAVMHSLCEK- 82 (361)
T ss_pred CCCHHHHHHHHHHhc-ccCCccccccccccccCchHHHHHHHHHHHcCCce-------EEEeCCHHHHHHHHHHHhcCC-
Confidence 445778888877763 2222211 11111234466677999999843 789999999999988876432
Q ss_pred HHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCC-ccccCHHHHHHHHhh-------CceEEEEecCCC
Q 018437 142 QQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDE-------NTICVAAILGST 213 (356)
Q Consensus 142 ~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~-------~~~~v~~~~~~~ 213 (356)
+++|+++.++|++...+++..|++++.+|++.+ ++.+|+++|++++++ ++++|++++++|
T Consensus 83 ------------gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n 150 (361)
T cd06452 83 ------------GDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDG 150 (361)
T ss_pred ------------CCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCC
Confidence 578999999999988889999999999999764 369999999999863 688999999999
Q ss_pred cccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 214 ~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
++|.+.|+++|.++|+++ ++++|+|+||+.+..++ +....++|.++.++||++++|.++|+++.++
T Consensus 151 ~tG~~~~~~~i~~~~~~~------~~~vivD~a~~~g~~~~-------~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~ 216 (361)
T cd06452 151 NYGNLHDAKKIAKVCHEY------GVPLLLNGAYTVGRMPV-------SGKELGADFIVGSGHKSMAASAPIGVLATTE 216 (361)
T ss_pred CCeeeccHHHHHHHHHHc------CCeEEEECCcccCCcCC-------CHHHcCCCEEEecCCccccCCCCeEEEEECH
Confidence 999999999999999999 99999999998654432 2222368999999999998888999998764
No 48
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.90 E-value=1.1e-22 Score=194.58 Aligned_cols=234 Identities=14% Similarity=0.009 Sum_probs=170.9
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCC-eEEecCCCcch-HH
Q 018437 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKP-NIVTGANVQVC-WE 168 (356)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~-~vi~s~~~h~s-~~ 168 (356)
+....+.+++++.+++++|+++++ ..+++|+|||+++..++.++..+ ++ .|+++...|.. +.
T Consensus 31 ~~~~~~~~~~r~~la~l~~~~~~~---~~i~~t~~~t~al~~~~~~l~~~-------------~~~vlv~~~~~~~~~~~ 94 (363)
T TIGR02326 31 SDYNIVVEQIRQQLLALATAEEGY---TSVLLQGSGTFAVEAVIGSAVPK-------------DGKLLVVINGAYGARIV 94 (363)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCc---eEEEEcCCCHHHHHHHHHhcCCC-------------CCeEEEEeCChhhHHHH
Confidence 356667788999999999997521 24789999999999988876432 33 45555555555 35
Q ss_pred HHHHhhCCeeEEEEecCCccccCHHHHHHHHhh--CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecc
Q 018437 169 KFARYFEVELKEVKLEEGYYVMNPVKAVELVDE--NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (356)
Q Consensus 169 ~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~--~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a 246 (356)
..++..|++++.++++++ +.+|++++++++++ ++++|.+++++|+||.+.|+++|.++|+++ ++++++|++
T Consensus 95 ~~a~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~------g~~livD~~ 167 (363)
T TIGR02326 95 QIAEYLGIPHHVVDTGEV-EPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRH------GKVTIVDAM 167 (363)
T ss_pred HHHHHcCCceEEEeCCCC-CCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHc------CCEEEEEcc
Confidence 778889999999999864 78999999999975 356788999999999999999999999999 999999998
Q ss_pred cccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCC-C-------CCCCCccccC
Q 018437 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYL-G-------SDQPTFTLNF 318 (356)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~ 318 (356)
++.+..| +++...++|.++.++|||+++|.|+|+++++++.. .........+. . .........+
T Consensus 168 ~~~g~~~-------~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 239 (363)
T TIGR02326 168 SSFGGIP-------IDIAELHIDYLISSANKCIQGVPGFGFVIARQAEL-AACKGNARSLSLDLYDQWRCMEDNHGKWRF 239 (363)
T ss_pred ccccCcc-------cchhhcCccEEEecCccccccCCcceEEEECHHHH-HHhhcCCCceeecHHHHHHHHhccCCCCCC
Confidence 8754442 44444579999999999999999999999975421 11100000000 0 0000001224
Q ss_pred CCChhHHHHHHHHHHHhCHH-HHHHHHHHHHhccCccc
Q 018437 319 SKGSSQIIAQYYQFIRLGFE-EITFTFISSLKVCPFLV 355 (356)
Q Consensus 319 tr~~~~~~~~~~~l~~lg~~-G~~~~~~~~~~~a~~l~ 355 (356)
|.+....+++..+++.+..+ |++++.++..+++++|.
T Consensus 240 t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~ 277 (363)
T TIGR02326 240 TSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLV 277 (363)
T ss_pred CCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 66677788888889887666 48888888877776653
No 49
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.90 E-value=3.8e-22 Score=191.81 Aligned_cols=214 Identities=16% Similarity=0.123 Sum_probs=170.9
Q ss_pred CCcccccccCCCC-hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHH
Q 018437 56 PRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (356)
Q Consensus 56 ~~~~l~~~~~~~~-~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (356)
..++|+.+.|..+ ++.+.+++.++++....+|....|..++++.+.+++.+.+|++.+. ...+++|+|+++|+..++
T Consensus 29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~--~~eiivt~Ga~~al~~~~ 106 (393)
T COG0436 29 DVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDP--EEEIIVTAGAKEALFLAF 106 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCeEEEeCCHHHHHHHHH
Confidence 3467777777655 4578888888776543255577899999999999999999976532 233899999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC--CccccCHHHHHHHHhhCceEEEEecCC
Q 018437 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE--GYYVMNPVKAVELVDENTICVAAILGS 212 (356)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~--~~~~~d~~~L~~~i~~~~~~v~~~~~~ 212 (356)
.++.++ +++|++++|.|++|...+.+.|++++.++++. ++|.+|++.|+++++++|++|++++||
T Consensus 107 ~a~~~p-------------GDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~ 173 (393)
T COG0436 107 LALLNP-------------GDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPN 173 (393)
T ss_pred HHhcCC-------------CCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCC
Confidence 999875 67999999999999999999999999999853 369999999999999999999999999
Q ss_pred Cccccc---CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCC--ceEEEE-cCCcC-CCCCcC
Q 018437 213 TLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPL--VKSINV-SGHKY-GLVYAG 284 (356)
Q Consensus 213 ~~tG~~---~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~--~Ds~~~-~~hK~-l~~P~g 284 (356)
||||++ +.+++|+++|++| ++|+++|++|..++.+ +.....+. ... -..+++ |..|. .++.+.
T Consensus 174 NPTGav~~~~~l~~i~~~a~~~------~i~ii~DEiY~~l~yd---~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwR 244 (393)
T COG0436 174 NPTGAVYSKEELKAIVELAREH------DIIIISDEIYEELVYD---GAEHPSILELAGARDRTITINSFSKTYGMTGWR 244 (393)
T ss_pred CCcCcCCCHHHHHHHHHHHHHc------CeEEEEehhhhhcccC---CCCcCCHhhcCCCcceEEEEecccccccccccc
Confidence 999998 4588999999999 9999999999987663 11111111 222 235555 47785 557899
Q ss_pred eeEEEEeCC
Q 018437 285 VGWVVWRTK 293 (356)
Q Consensus 285 ~g~l~~~~~ 293 (356)
+|+++..++
T Consensus 245 vG~~v~~~~ 253 (393)
T COG0436 245 IGWVVGPPE 253 (393)
T ss_pred eeEeecChH
Confidence 999988643
No 50
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.89 E-value=9e-23 Score=189.66 Aligned_cols=221 Identities=13% Similarity=0.007 Sum_probs=161.3
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCC
Q 018437 97 QNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEV 176 (356)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~ 176 (356)
-+++++.+++++|.+. ..++|+|+|+++..++.++..+ +++|+++.++|.++..++...|+
T Consensus 61 i~~~~~~~A~~~ga~~------~~~~~~Gst~a~~~~l~al~~~-------------gd~Vlv~~~~h~s~~~~~~~~g~ 121 (294)
T cd00615 61 IKEAQELAARAFGAKH------TFFLVNGTSSSNKAVILAVCGP-------------GDKILIDRNCHKSVINGLVLSGA 121 (294)
T ss_pred HHHHHHHHHHHhCCCC------EEEEcCcHHHHHHHHHHHcCCC-------------CCEEEEeCCchHHHHHHHHHCCC
Confidence 4566777999999864 2455899999999988877542 57999999999999999999999
Q ss_pred eeEEEEecCCc-----cccCHHHHHHHHhh--CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccc
Q 018437 177 ELKEVKLEEGY-----YVMNPVKAVELVDE--NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (356)
Q Consensus 177 ~v~~v~~~~~~-----~~~d~~~L~~~i~~--~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~ 249 (356)
++++++++.+. +.+|++++++++.+ ++++|++++| |++|.+.|+++|.++|+++ +++++||+||+.
T Consensus 122 ~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~------g~~livDeA~~~ 194 (294)
T cd00615 122 VPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHR------GLPVLVDEAHGA 194 (294)
T ss_pred EEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhc------CCeEEEECcchh
Confidence 99999875432 37999999999964 6788999988 6899999999999999999 999999999986
Q ss_pred ccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCCCChhHHHHHH
Q 018437 250 FIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQY 329 (356)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~ 329 (356)
... +.+..+.+....++|.++.|+||++.+|.++|++.+++.......+....... ..+|++....+++-
T Consensus 195 ~~~--~~~~~~~~~~~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~~~~~--------~ttsps~~~~asl~ 264 (294)
T cd00615 195 HFR--FHPILPSSAAMAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVNEALNLH--------QSTSPSYLILASLD 264 (294)
T ss_pred hhc--cCcccCcchhhcCCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHHHHHHHH--------CCCCcHHHHHHHHH
Confidence 432 22222223334589999999999998888888888865422211111111111 12456666667777
Q ss_pred HHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 330 YQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 330 ~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
.++..+..+| ++++++.+++++++
T Consensus 265 ~a~~~~~~~g-~~~~~~~~~~~~~~ 288 (294)
T cd00615 265 VARAMMALEG-KELVEELIELALYA 288 (294)
T ss_pred HHHHHHHHHh-HHHHHHHHHHHHHH
Confidence 7777665555 33566666666554
No 51
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.89 E-value=2.7e-21 Score=197.99 Aligned_cols=288 Identities=9% Similarity=-0.028 Sum_probs=207.8
Q ss_pred CCCHHHHHHHHHHHhhhcCC---CCccccc-----ccCCCChHHHHHHHHHHhcccCCCc-ccCcchHHHHHHHHHHHHH
Q 018437 36 SMPKEAAYQVINDELMLDGN---PRLNLAS-----FVTTWMEPECDKLVMASINKNYVDM-DEYPVTTELQNRCVNMIAH 106 (356)
Q Consensus 36 ~~~~~~i~~~~~~~~~~~~~---~~~~l~~-----~~~~~~~~~v~~~i~~~~~~~~~~~-~~~~~~~~le~~~~~~la~ 106 (356)
..++.+++++++++..++.. ..+.|++ +......|. ...++++.+++.| +.++++.++..++.+++++
T Consensus 478 ~~SE~el~r~~~~La~kn~~~~~~~~~LGsCTmK~n~~~~~~p~---s~~eF~t~hPyqp~e~sQG~lq~i~elq~~l~e 554 (954)
T PRK12566 478 HHSETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNATSEMIPI---TWPEFAQLHPFAPREQAEGYRAMIDELEAWLCA 554 (954)
T ss_pred CCCHHHHHHHHHHHHhcCcCcccCcccCcccccCcCcHHhhhcc---cchhhhcCCCCCchhhhcCHHHHHHHHHHHHHH
Confidence 47899999999988776532 1223433 111111121 2345566677777 6688999999999999999
Q ss_pred HhCCCCCCCCCCCeEEeC-ChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC
Q 018437 107 LFNTPVADDKTAVGVGTV-GSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE 185 (356)
Q Consensus 107 l~g~~~~~~~~~~~~~t~-Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~ 185 (356)
++|++. ..+-. +|+.+++.++++.+.++.. +|. ..+.+|++|...|.+....+...|++++.||+|+
T Consensus 555 LtGmd~-------~Sl~p~sGA~gE~A~Lmair~yh~~----~Ge-~~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D~ 622 (954)
T PRK12566 555 ITGFDA-------ICMQPNSGAQGEYAGLLAIRRYHRS----RGQ-SQRDICLIPSSAHGTNPASAQMAGMRVVIVECDP 622 (954)
T ss_pred HHCCCe-------EeecCCchHHHHHHHHHHHHHHHHh----cCC-CCCCEEEecccccccCHHHHHHCCCEEEEeccCC
Confidence 999985 23444 7788888888888765432 222 2256899999999777777888899999999986
Q ss_pred CccccCHHHHHHHHh---hCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccc
Q 018437 186 GYYVMNPVKAVELVD---ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD 262 (356)
Q Consensus 186 ~~~~~d~~~L~~~i~---~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~ 262 (356)
+|.+|+++|+++++ +++.+|++++|++..+..+|+++|+++|+++ |+++++|+|+.....++..
T Consensus 623 -~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~------Galv~vDgA~~~a~~~l~~------ 689 (954)
T PRK12566 623 -DGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQH------GGQVYMDGANLNAQVGLAR------ 689 (954)
T ss_pred -CCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHc------CCEEEEEeeChhhccCCCC------
Confidence 48999999999997 5788899999999866667899999999999 9999999998643332111
Q ss_pred ccCCCceEEEEcCCcCCCCCcCeeEEEEeC---CCCCccccccccCCCC----CC---CCCccccCCCChhHHHHHHHHH
Q 018437 263 FRLPLVKSINVSGHKYGLVYAGVGWVVWRT---KDDLPDELVFHINYLG----SD---QPTFTLNFSKGSSQIIAQYYQF 332 (356)
Q Consensus 263 ~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~---~~~~~~~~~~~~~~~~----~~---~~~~~~~~tr~~~~~~~~~~~l 332 (356)
....|+|.++.++|||+++|.|.|..++.. ++.+..-+ +.+.+ +. .......++-++..+...|.++
T Consensus 690 Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfL---p~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi 766 (954)
T PRK12566 690 PADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFV---ANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYI 766 (954)
T ss_pred hhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhc---cCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHH
Confidence 124589999999999999998888877654 12111111 11211 10 1111233566666788999999
Q ss_pred HHhCHHHHHHHHHHHHhccCccc
Q 018437 333 IRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 333 ~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
..+|.+ +.+....++.+|+|++
T Consensus 767 ~~lG~e-Lk~aa~~ailnAnYla 788 (954)
T PRK12566 767 AMMGPQ-LADASEVAILSANYLA 788 (954)
T ss_pred HHHCHH-HHHHHHHHHHHHHHHH
Confidence 999999 9999998899998875
No 52
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.88 E-value=1.2e-21 Score=204.41 Aligned_cols=269 Identities=16% Similarity=0.053 Sum_probs=185.9
Q ss_pred cccccCCCCh-HHHHHHHHHHhcc---cCCC-cccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHH
Q 018437 60 LASFVTTWME-PECDKLVMASINK---NYVD-MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (356)
Q Consensus 60 l~~~~~~~~~-~~v~~~i~~~~~~---~~~~-~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (356)
|....+++++ ..+.+++..++.. |++. +..+....++.+++++.+++++|+++++ ..+++|+|+|+|+.++.
T Consensus 38 LD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~---~~VvFtsnaT~alnlva 114 (805)
T PLN02724 38 LDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSD---YACVFTSGATAALKLVG 114 (805)
T ss_pred EeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccc---eEEEEeCChHHHHHHHH
Confidence 3333344433 4566666555432 3322 1123455677789999999999997522 34799999999999887
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH---HHhhCCeeEEEEecC-------CccccCH--HHHHHHHh--
Q 018437 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF---ARYFEVELKEVKLEE-------GYYVMNP--VKAVELVD-- 200 (356)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~---~~~~G~~v~~v~~~~-------~~~~~d~--~~L~~~i~-- 200 (356)
.++. + ..+++|+++...|.++... ++..|++++.++++. ..+.+|+ ++|++.+.
T Consensus 115 ~~l~--~----------~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~ 182 (805)
T PLN02724 115 ETFP--W----------SSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSK 182 (805)
T ss_pred HHCC--C----------CCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhh
Confidence 6542 1 1146899999999885543 344599999999862 1245544 66776642
Q ss_pred --------hCceEEEEecCCCcccccCCHHHHHHHHHHhhhccC---CCCcEEEecccccccccccCCCCcccccCCCce
Q 018437 201 --------ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETG---WDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVK 269 (356)
Q Consensus 201 --------~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~---~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D 269 (356)
+++++|++++.+|.+|.+.|++.|..+++.. .++. .++++++|+||+.+.. +++++..++|
T Consensus 183 l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~-~~~~~~~g~~~v~vDaaQ~~g~~-------piDv~~~~~D 254 (805)
T PLN02724 183 LQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQ-HSNFSKSGRWMVLLDAAKGCGTS-------PPDLSRYPAD 254 (805)
T ss_pred hccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhc-ccccccCcceEEEeehhhhcCCC-------CCChhhcCCC
Confidence 4568999999999999999999876555532 0000 0357999999987655 4566666899
Q ss_pred EEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCC-----------------CCccccCCCChhHHHHHHHHH
Q 018437 270 SINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQ-----------------PTFTLNFSKGSSQIIAQYYQF 332 (356)
Q Consensus 270 s~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~tr~~~~~~~~~~~l 332 (356)
++++|+|||+++|.|+|+|++|++ .+. . ..+.+.+++. ...-..||.+...++++.+++
T Consensus 255 fl~~S~HK~~GgP~G~G~L~vr~~-~~~-~--l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal 330 (805)
T PLN02724 255 FVVVSFYKIFGYPTGLGALLVRRD-AAK-L--LKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGF 330 (805)
T ss_pred EEEEecceeccCCCCceEEEEehh-hhh-h--hcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHH
Confidence 999999999988999999999864 221 1 1223333321 011135899999999999999
Q ss_pred HHhCHHHHHHHHHHHHhccCccc
Q 018437 333 IRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 333 ~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
+.+...|++++.++..++++||.
T Consensus 331 ~~l~~ig~~~I~~~~~~L~~~l~ 353 (805)
T PLN02724 331 KLLNRLTISAIAMHTWALTHYVA 353 (805)
T ss_pred HHHHHhChHHHHHHHHHHHHHHH
Confidence 99988889988898888888764
No 53
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.88 E-value=1.8e-21 Score=185.19 Aligned_cols=252 Identities=12% Similarity=0.042 Sum_probs=177.1
Q ss_pred CCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (356)
|..+++.+.+++....+ ++ .+....+.+++++.+++++|++++. ..++++.|||+++..++.++..+
T Consensus 7 p~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~la~~~~~~~~~---~~i~~~~~gt~~l~~~~~~~~~~---- 73 (355)
T TIGR03301 7 PLSTSATVRDAMLVDWC----HW--DSEFNDVTDQVRDRLLALAGGDDNH---TCVLLQGSGTFAVEATIGSLVPR---- 73 (355)
T ss_pred CCCCCHHHHHHhhhhcc----CC--CHHHHHHHHHHHHHHHHHhcCCCCC---cEEEEeCCcHHHHHHHHHhccCC----
Confidence 33455777777765322 22 1234467789999999999998621 24678999999999998876532
Q ss_pred HHhcCCCCCCCeEE-ecCCCcch-HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh--CceEEEEecCCCcccccCC
Q 018437 145 RKEQGKPYDKPNIV-TGANVQVC-WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE--NTICVAAILGSTLTGEFED 220 (356)
Q Consensus 145 ~~~~g~~~~~~~vi-~s~~~h~s-~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~--~~~~v~~~~~~~~tG~~~~ 220 (356)
+++++ +....|.. +..+++..|++++.++++++ +.+|+++|++++++ +++.|++++++|++|.+.|
T Consensus 74 ---------~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~ 143 (355)
T TIGR03301 74 ---------DGKLLVLINGAYGERLAKICEYLGIPHTDLNFSEY-EPPDLNRIEEALAADPDITHVATVHHETTTGILNP 143 (355)
T ss_pred ---------CCeEEEECCCchhhHHHHHHHHcCCceEEEecCCC-CCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH
Confidence 34544 44455544 56778889999999998764 78999999999975 4567888999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCcccc
Q 018437 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDEL 300 (356)
Q Consensus 221 i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~ 300 (356)
+++|.++|+++ ++++++|++++.+..+ +++...++|.+..++|||+++|.|+|+++++++ ... .+
T Consensus 144 ~~~i~~l~~~~------~~~livD~~~s~g~~~-------~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~-~~~-~~ 208 (355)
T TIGR03301 144 LEAIAKVARSH------GAVLIVDAMSSFGAIP-------IDIEELDVDALIASANKCLEGVPGFGFVIARRD-LLE-AS 208 (355)
T ss_pred HHHHHHHHHHc------CCEEEEEeccccCCcc-------cchhhcCccEEEecCCcccccCCceeEEEECHH-HHH-Hh
Confidence 99999999999 9999999987654332 344444789999999999999999999998754 221 11
Q ss_pred c-cccCCCCC-------CCCCccccCCCChhHHHHHHHHHHHhCHHH-HHHHHHHHHhccCcc
Q 018437 301 V-FHINYLGS-------DQPTFTLNFSKGSSQIIAQYYQFIRLGFEE-ITFTFISSLKVCPFL 354 (356)
Q Consensus 301 ~-~~~~~~~~-------~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G-~~~~~~~~~~~a~~l 354 (356)
. ...++... ........+|.+....+++..+++.+..+| +++..++..++++++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~ 271 (355)
T TIGR03301 209 AGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELL 271 (355)
T ss_pred hCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 1 00011000 000011234666666777888888887766 777777777666554
No 54
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.88 E-value=2.4e-21 Score=181.89 Aligned_cols=256 Identities=13% Similarity=0.066 Sum_probs=197.9
Q ss_pred cCCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHH
Q 018437 64 VTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (356)
Q Consensus 64 ~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (356)
.|...++.+.+++..-. .+ ..++.+..+..++++.+.++++.+. ....+++.+||.++..++..+..+
T Consensus 12 GP~~v~~~V~~am~~~~---~~--h~s~~F~~~~~~~~~~L~~v~~t~~----~~~~ll~gsGt~amEAav~sl~~p--- 79 (383)
T COG0075 12 GPVPVPPRVLLAMARPM---VG--HRSPDFVGIMKEVLEKLRKVFGTEN----GDVVLLSGSGTLAMEAAVASLVEP--- 79 (383)
T ss_pred CCCCCCHHHHHHhcCCC---CC--CCCHHHHHHHHHHHHHHHHHhcCCC----CcEEEEcCCcHHHHHHHHHhccCC---
Confidence 34445567776664322 12 3466788899999999999999883 134577788898888888877653
Q ss_pred HHHhcCCCCCCCeEEecCCCcch--HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh--CceEEEEecCCCcccccC
Q 018437 144 KRKEQGKPYDKPNIVTGANVQVC--WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE--NTICVAAILGSTLTGEFE 219 (356)
Q Consensus 144 ~~~~~g~~~~~~~vi~s~~~h~s--~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~--~~~~v~~~~~~~~tG~~~ 219 (356)
+++|++....-+. +...++..|++++.+.++.. -.+|++++++++++ +.+.|.++|..|.||...
T Consensus 80 ----------gdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~~wg-~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvln 148 (383)
T COG0075 80 ----------GDKVLVVVNGKFGERFAEIAERYGAEVVVLEVEWG-EAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLN 148 (383)
T ss_pred ----------CCeEEEEeCChHHHHHHHHHHHhCCceEEEeCCCC-CCCCHHHHHHHHhcCCCccEEEEEeccCcccccC
Confidence 5677776666554 88999999999999999875 68999999999985 467899999999999999
Q ss_pred CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCcc-
Q 018437 220 DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPD- 298 (356)
Q Consensus 220 ~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~- 298 (356)
|+++|+++||+| |.+++||++.+.+.. ++++...++|.+..+++|++++|+|.|++.++++.+-.-
T Consensus 149 pl~~I~~~~k~~------g~l~iVDaVsS~Gg~-------~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~ 215 (383)
T COG0075 149 PLKEIAKAAKEH------GALLIVDAVSSLGGE-------PLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIE 215 (383)
T ss_pred cHHHHHHHHHHc------CCEEEEEecccCCCc-------ccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHh
Confidence 999999999999 999999998775544 345556699999999999999999999999987533110
Q ss_pred -----ccccccC-CCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 299 -----ELVFHIN-YLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 299 -----~~~~~~~-~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
.++.+.. |..........+.|.+....+++..+|+.+-.+|++++++++..++++++
T Consensus 216 ~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r 278 (383)
T COG0075 216 ERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALR 278 (383)
T ss_pred cCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 1111111 11111111345689999999999999999999999999999999998764
No 55
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.88 E-value=3.6e-21 Score=184.38 Aligned_cols=252 Identities=12% Similarity=0.011 Sum_probs=177.5
Q ss_pred CCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (356)
|..+.+.+.+++...+ .++ .+......+++++.+++++|.+++. ...++|.+||+++..++.++..+
T Consensus 13 P~~~~~~~~~a~~~~~----~~~--~~~~~~~~~~~~~~l~~l~~~~~~~---~~i~~~~~gt~~l~~~~~~l~~~---- 79 (368)
T PRK13479 13 PLTTSRTVREAMLRDW----GSW--DDDFNALTASVRAKLVAIATGEEGY---TCVPLQGSGTFSVEAAIGSLVPR---- 79 (368)
T ss_pred CCCCCHHHHHHhCCCC----CCC--ChHHHHHHHHHHHHHHHHhCCCCCc---eEEEEcCCcHHHHHHHHHhccCC----
Confidence 3344566666654332 222 2334567789999999999986421 33678999999999998887432
Q ss_pred HHhcCCCCCCCeEEecCCCcchH--HHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhC--ceEEEEecCCCcccccCC
Q 018437 145 RKEQGKPYDKPNIVTGANVQVCW--EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN--TICVAAILGSTLTGEFED 220 (356)
Q Consensus 145 ~~~~g~~~~~~~vi~s~~~h~s~--~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~--~~~v~~~~~~~~tG~~~~ 220 (356)
+++|++..+.++.. ...++..|++++.||++++ +.+|+++++++++++ +++|++++++|+||.+.|
T Consensus 80 ---------~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~ 149 (368)
T PRK13479 80 ---------DGKVLVPDNGAYGARIAQIAEYLGIAHVVLDTGED-EPPDAAEVEAALAADPRITHVALVHCETTTGILNP 149 (368)
T ss_pred ---------CCeEEEEeCCchHHHHHHHHHHcCCcEEEEECCCC-CCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC
Confidence 45677766666554 4778889999999999764 789999999999754 567889999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCcccc
Q 018437 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDEL 300 (356)
Q Consensus 221 i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~ 300 (356)
+++|.++|+++ ++++++|++++.+.. +.++...++|.++.++|||+++|.|+|+++++++ .+ +.+
T Consensus 150 ~~~i~~l~~~~------~~~livDa~~~~g~~-------~~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~-~~-~~~ 214 (368)
T PRK13479 150 LDEIAAVAKRH------GKRLIVDAMSSFGAI-------PIDIAELGIDALISSANKCIEGVPGFGFVIARRS-EL-EAC 214 (368)
T ss_pred HHHHHHHHHHc------CCEEEEEcccccCCc-------cccccccCceEEEecCccccccCCCceEEEECHH-HH-HHh
Confidence 99999999999 999999987754322 2344444789999999999999999999998753 22 111
Q ss_pred cc-ccCCCCC-------CCCCccccCCCChhHHHHHHHHHHHhCHH-HHHHHHHHHHhccCcc
Q 018437 301 VF-HINYLGS-------DQPTFTLNFSKGSSQIIAQYYQFIRLGFE-EITFTFISSLKVCPFL 354 (356)
Q Consensus 301 ~~-~~~~~~~-------~~~~~~~~~tr~~~~~~~~~~~l~~lg~~-G~~~~~~~~~~~a~~l 354 (356)
.. ..+|... ........+|.+....+++.++++.+..+ ++++.+++..+++++|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l 277 (368)
T PRK13479 215 KGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTL 277 (368)
T ss_pred hcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Confidence 10 0111000 00001112366666678888888887655 4777777777777665
No 56
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.88 E-value=6e-21 Score=187.54 Aligned_cols=277 Identities=15% Similarity=0.054 Sum_probs=186.1
Q ss_pred HHHHHHHHHHHhhhcCCCCcccccccCCCChHHHHHHHHHHhcccC--CCccc-----CcchHHHHHHHHHHHHHHhCCC
Q 018437 39 KEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNY--VDMDE-----YPVTTELQNRCVNMIAHLFNTP 111 (356)
Q Consensus 39 ~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~i~~~~~~~~--~~~~~-----~~~~~~le~~~~~~la~l~g~~ 111 (356)
..++.+.+.+..... ...++|.. .-+.++|.+.+++.+.+.+.+ +++.. ......+|+.+++.+++++|++
T Consensus 19 d~~~~~~~~~~~~~~-~~~l~l~~-sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~ 96 (452)
T PTZ00094 19 DPELYELIEKEKERQ-IEGLELIA-SENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLD 96 (452)
T ss_pred CHHHHHHHHHHHHHH-HcCeeEec-ccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCC
Confidence 455666665543322 12233322 122456889998887776443 33322 1235677777899999999997
Q ss_pred CCCCCCCCeEEe---CChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHh----------hCCee
Q 018437 112 VADDKTAVGVGT---VGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARY----------FEVEL 178 (356)
Q Consensus 112 ~~~~~~~~~~~t---~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~----------~G~~v 178 (356)
+++ .+++ ++|+++|+.++.++.++ +++|+++...|.+....+.. .++++
T Consensus 97 ~~~-----~~~~~~~~sgt~an~~v~~al~~~-------------gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~ 158 (452)
T PTZ00094 97 PEE-----WGVNVQPYSGSPANFAVYTALLQP-------------HDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFES 158 (452)
T ss_pred ccc-----ceeecCCCchHHHHHHHHHHhcCC-------------CCEEEecccccCCcccccccccccccccceeeeee
Confidence 632 3344 78999999999887432 57899999999876544321 12334
Q ss_pred EEEEecCCccccCHHHHHHHHhh-CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCC
Q 018437 179 KEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP 257 (356)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~ 257 (356)
..++++.+ +.+|+++|++++.+ ++++|++. ++.+|.+.|+++|.++|+++ |+++|||++|+.+..+. +
T Consensus 159 ~~~~~~~~-g~id~~~L~~~l~~~~~~lvi~~--~s~~g~~~di~~I~~i~~~~------ga~l~vDaaq~~G~i~~--~ 227 (452)
T PTZ00094 159 LPYQVNEK-GLIDYDKLEELAKAFRPKLIIAG--ASAYPRDIDYKRFREICDSV------GAYLMADIAHTSGLVAA--G 227 (452)
T ss_pred eecccCCC-CCcCHHHHHHHHHHhCCCEEEEe--CCCCCCccCHHHHHHHHHHc------CCEEEEeccchhccccC--C
Confidence 45556664 89999999999965 66666543 44689999999999999999 99999999999877742 1
Q ss_pred CCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCH
Q 018437 258 DLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF 337 (356)
Q Consensus 258 ~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~ 337 (356)
..+.. ..++|.+++++|||+++|.| |+++++++ .. ..+. .+.... ..+.+.|+.+...++++.++++.+..
T Consensus 228 ~~~~~--~~~~D~l~~S~hK~l~GP~G-g~l~~~~~-~~-~~l~---~~~~~~-~~p~~~G~~~~~~iaal~~al~~~~~ 298 (452)
T PTZ00094 228 VLPSP--FPYADVVTTTTHKSLRGPRS-GLIFYRKK-VK-PDIE---NKINEA-VFPGLQGGPHNHQIAAIAVQLKEVQS 298 (452)
T ss_pred CCCCC--CCCCcEEEcCCccCCCCCCc-eEEEEecc-cc-hHHH---Hhhccc-cCCCCCCCchHHHHHHHHHHHHHHhC
Confidence 11111 23799999999999999998 77777653 22 1110 001000 00113466667778999999999977
Q ss_pred HHHHHHHHHHHhccCccc
Q 018437 338 EEITFTFISSLKVCPFLV 355 (356)
Q Consensus 338 ~G~~~~~~~~~~~a~~l~ 355 (356)
.+++++.++..+++++|.
T Consensus 299 ~~~~~~~~~i~~l~~~l~ 316 (452)
T PTZ00094 299 PEWKEYAKQVLKNAKALA 316 (452)
T ss_pred hhHHHHHHHHHHHHHHHH
Confidence 787888888888877764
No 57
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.85 E-value=7e-20 Score=169.57 Aligned_cols=225 Identities=14% Similarity=0.105 Sum_probs=173.9
Q ss_pred HHHHHHHHHhhhcCCCCcccccccCCCCh-HHHHHHHHHHhccc-CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCC
Q 018437 41 AAYQVINDELMLDGNPRLNLASFVTTWME-PECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTA 118 (356)
Q Consensus 41 ~i~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~v~~~i~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~ 118 (356)
.++-++.........+.. |+.+.++.++ ..+.+++..+.... ...|...-+..++.+.+++++++++|..... ..
T Consensus 18 ~vw~e~~~la~e~~~~~~-LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~--~~ 94 (420)
T KOG0257|consen 18 YVWTEINRLAAEHKVPNP-LGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDP--DD 94 (420)
T ss_pred cHHHHHHHHHHhcCCCCc-ccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCC--cc
Confidence 455555544443333332 6777777665 47788888777653 4456677789999999999999998887532 34
Q ss_pred CeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec-------CCccccC
Q 018437 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-------EGYYVMN 191 (356)
Q Consensus 119 ~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~-------~~~~~~d 191 (356)
.+.+|.|+.+++..++++++++ +++|++.+|.+.+|....++.|..+++|+.. ..+|.+|
T Consensus 95 eVlVT~GA~~ai~~~~~~l~~~-------------GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D 161 (420)
T KOG0257|consen 95 EVLVTAGANEAISSALLGLLNP-------------GDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLD 161 (420)
T ss_pred cEEEecCchHHHHHHHHHHcCC-------------CCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCC
Confidence 5899999999999999999875 7899999999999999999999999999987 3469999
Q ss_pred HHHHHHHHhhCceEEEEecCCCccccc---CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCC
Q 018437 192 PVKAVELVDENTICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPL 267 (356)
Q Consensus 192 ~~~L~~~i~~~~~~v~~~~~~~~tG~~---~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~ 267 (356)
.+.|+.++.++|++|+++.|+||||.+ ..|++|+++|++| |+++++|++|..++.+ +..-..+. +++
T Consensus 162 ~~~le~~~t~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~------~~lvisDevYe~~v~d---~~~h~r~aslPg 232 (420)
T KOG0257|consen 162 PEELESKITEKTKAIILNTPHNPTGKVFSREELERIAELCKKH------GLLVISDEVYEWLVYD---GNKHIRIASLPG 232 (420)
T ss_pred hHHHHhhccCCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHC------CEEEEEhhHhHHHhhC---CCcceeeecCCc
Confidence 999999999999999999999999998 5689999999999 9999999999987652 21001111 232
Q ss_pred c--eEEE-EcCCcC-CCCCcCeeEEEE
Q 018437 268 V--KSIN-VSGHKY-GLVYAGVGWVVW 290 (356)
Q Consensus 268 ~--Ds~~-~~~hK~-l~~P~g~g~l~~ 290 (356)
. -.++ .|+.|. +++.|..|+++.
T Consensus 233 m~ertitvgS~gKtf~~TGWrlGW~ig 259 (420)
T KOG0257|consen 233 MYERTITVGSFGKTFGVTGWRLGWAIG 259 (420)
T ss_pred hhheEEEeccccceeeeeeeeeeeeec
Confidence 1 2233 347785 556788999987
No 58
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.85 E-value=1.9e-19 Score=166.96 Aligned_cols=304 Identities=13% Similarity=0.041 Sum_probs=214.0
Q ss_pred hhcCCCCCCCCCCCCHHHHHHHHHHHhhhcCC---CCcccccccCCCChHHHHHH---HHHHhcccCCCccc-CcchHHH
Q 018437 24 RAAIPRFKMPDNSMPKEAAYQVINDELMLDGN---PRLNLASFVTTWMEPECDKL---VMASINKNYVDMDE-YPVTTEL 96 (356)
Q Consensus 24 ~~~~~~~~lp~~~~~~~~i~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~v~~~---i~~~~~~~~~~~~~-~~~~~~l 96 (356)
.+.+.....|....++-++++++.++..++.. .-+.|++ ++=-..+.+.+. ...+.+-++..+.. .++..++
T Consensus 32 ~~~~~r~~~~~Pe~SE~e~~Rh~~rLs~kn~avd~~m~PLGS-CTMK~Np~~e~~~~~~p~f~~iHP~~pe~~vqG~l~l 110 (496)
T COG1003 32 PHPVFRRYPPLPEHSETEMVRHYTRLSQKDLAVDRGMIPLGS-CTMKLNPKAEMKPATWPEFANIHPFQPEEQVQGYLEL 110 (496)
T ss_pred CcHHhhcCCCCccccHHHHHHHHHHHHhcccccccCccCCcc-cccccCchhhcccccccchhhcCCCCChHHHHHHHHH
Confidence 33333334445568999999999887765421 1122221 111111222222 22445556666544 5699999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCC
Q 018437 97 QNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEV 176 (356)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~ 176 (356)
..++.+|++++.|++. ...--..|+++-..++++.+.++..+ | ...+.++++|+.+|-.....+.+.|.
T Consensus 111 i~~Lq~~L~~ITG~Da------vsLQP~AGAqGE~aGll~Ir~YHe~r----G-~~~R~~~LIP~SAHGTNPASAam~G~ 179 (496)
T COG1003 111 IYELQEWLKEITGMDA------VSLQPNAGAQGEYAGLLAIRAYHESR----G-EGHRNICLIPDSAHGTNPASAAMAGF 179 (496)
T ss_pred HHHHHHHHHHhcCCce------eeccCCCCcchhhHHHHHHHHHHHHc----C-CCcCcEEEeeccccCCChhhHhhcCc
Confidence 9999999999999985 23344577888999999988876532 2 12356899999999999999999999
Q ss_pred eeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCccccc-CCHHHHHHHHHHhhhccCCCCcEEEeccccccccccc
Q 018437 177 ELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEF-EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (356)
Q Consensus 177 ~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~-~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (356)
+|+.|+++++ |.+|+++|++++.+++.++.+|+|||- |.+ .+|.+|+++.+++ |..+..|||--...+...
T Consensus 180 ~VV~V~~~~~-G~VDlddLk~k~~~~~AalMiTnPsT~-GvFE~~I~ei~~ivH~~------Gg~vY~DGANlNA~vG~~ 251 (496)
T COG1003 180 KVVVVKCDEN-GNVDLDDLRAKAEDNLAALMITNPSTL-GVFEEDIREICEIVHEA------GGQVYYDGANLNAIVGLA 251 (496)
T ss_pred eEEEEecCCC-CCccHHHHHHHhccceeEEEeccCccc-ccchhhHHHHHHHHHHc------CCEEEecCcchhhhhccc
Confidence 9999999985 999999999999999999999999998 999 5799999999999 999999999655444323
Q ss_pred CCCCcccccCCCceEEEEcCCcCCCCC-----cCeeEEEEeCCCCCccccccc------cCCCCCC-CC-Ccc--ccCCC
Q 018437 256 YPDLEWDFRLPLVKSINVSGHKYGLVY-----AGVGWVVWRTKDDLPDELVFH------INYLGSD-QP-TFT--LNFSK 320 (356)
Q Consensus 256 ~~~~~~~~~~~~~Ds~~~~~hK~l~~P-----~g~g~l~~~~~~~~~~~~~~~------~~~~~~~-~~-~~~--~~~tr 320 (356)
+| - ..|+|.+-++.||.++.| +|.|-+.++.. +..-++.. ..|.... .. ... -..--
T Consensus 252 rP---G---d~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~--L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~G 323 (496)
T COG1003 252 RP---G---DMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAH--LAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYG 323 (496)
T ss_pred cc---c---ccccceEEeecccccccCCCCCCCCCCceehHhh--ccccCCCCcccCCCccccccCCCCccceeeccccC
Confidence 32 2 348999999999996555 68888988742 22222110 1111110 00 000 01112
Q ss_pred ChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 321 GSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 321 ~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
++......|+++..+|.+|+++.-+.+.-+|.|++
T Consensus 324 s~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia 358 (496)
T COG1003 324 SASILPIAWAYIRMMGADGLKQASEVAVLNANYIA 358 (496)
T ss_pred cchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHH
Confidence 34456788999999999999999999999999975
No 59
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.85 E-value=2.7e-19 Score=171.63 Aligned_cols=164 Identities=16% Similarity=0.065 Sum_probs=135.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhC
Q 018437 96 LQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFE 175 (356)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G 175 (356)
...+.++.+++++|++. ..+++||++++..++.++..+ +++|+++.+.|++....++..|
T Consensus 52 ~~~~~~e~lA~~~g~~~-------~~i~~g~~~a~~~~~~~l~~~-------------gd~Vl~~~~~h~s~~~~~~~~g 111 (370)
T TIGR02539 52 PIHDFLEDLAEFLGMDE-------ARVTHGAREGKFAVMHALCKE-------------GDWVVLDGLAHYTSYVAAERAG 111 (370)
T ss_pred HHHHHHHHHHHHhCCCc-------eEEECChHHHHHHHHHHhhCC-------------CCEEEECCcccHHHHHHHHHcC
Confidence 33456677999999985 567899999999988877532 5789999999999888889999
Q ss_pred CeeEEEEecC-CccccCHHHHHHHHhh-------CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccc
Q 018437 176 VELKEVKLEE-GYYVMNPVKAVELVDE-------NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAAS 247 (356)
Q Consensus 176 ~~v~~v~~~~-~~~~~d~~~L~~~i~~-------~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~ 247 (356)
++++.+|.++ +++.+|+++|++++++ ++++|++++++|++|.+.|+++|.++|+++ ++++++|+||
T Consensus 112 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~------~~~livDea~ 185 (370)
T TIGR02539 112 LNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREK------GVPLLLNCAY 185 (370)
T ss_pred CEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHc------CCeEEEECcc
Confidence 9999999864 2489999999999963 578999999999999999999999999999 9999999999
Q ss_pred ccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 248 GGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
+.+..+ .+....++|.++.++||+++++.++|+++.++
T Consensus 186 ~~g~~~-------~~~~~~~~di~v~s~sK~~~~~g~~G~l~~~~ 223 (370)
T TIGR02539 186 TVGRMP-------VSAKEIGADFIVGSGHKSMAASGPCGVLGMSE 223 (370)
T ss_pred ccCCcC-------CCHHHcCCCEEEeeCcccccCCCCEEEEEECH
Confidence 875432 11222358999999999998777789998764
No 60
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.85 E-value=2.9e-19 Score=170.24 Aligned_cols=302 Identities=15% Similarity=0.105 Sum_probs=181.6
Q ss_pred ccccccc-cchhhhhcCC-CCCCCCCCCCHHHHHHHHHHHhhhcCCCCcccccccCC-CChHHHHHHHH---HHhcc-cC
Q 018437 12 EILSSTF-ASRYVRAAIP-RFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTT-WMEPECDKLVM---ASINK-NY 84 (356)
Q Consensus 12 ~~~~~~~-~~~~~~~~~~-~~~lp~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~v~~~i~---~~~~~-~~ 84 (356)
++++++| ..+|..-.+. ...+|+. +++.+++++++++..++......++.+..+ ..++.+.+.+. +++.. .+
T Consensus 21 ~sieeL~~~~IP~~i~~~~~~~lp~~-~sE~e~~r~~~~la~kN~~~~~fiG~G~y~~~~P~~i~~~i~~~~ef~TaYtP 99 (429)
T PF02347_consen 21 KSIEELFDSDIPEEIRLKKPLNLPEP-LSEYELLRHLERLASKNKSYTSFIGAGSYTHYVPAVIDRNILSRPEFYTAYTP 99 (429)
T ss_dssp SSTGGGG-TTS-GGG-SS-----------HHHHHHHHHHHHTTS--TTS---CTTT-----HHHHH-HHCCHHCCCS-ST
T ss_pred CCHHHHhhhhCCHhhcCCCCCCCCCC-CCHHHHHHHHHHHHhcCCCCCccccccccCceeChhhcCccccChhhhccCCC
Confidence 6899999 9999988776 4577765 899999999999887765422223333222 33444554232 44543 46
Q ss_pred CCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCc
Q 018437 85 VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ 164 (356)
Q Consensus 85 ~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h 164 (356)
++++.+++..+...+.+.++++++|++. ....+-.|+|.+--.++++.+.. ++ ++.+|++|...|
T Consensus 100 YQpEisQG~Lq~lfe~Qs~i~eLTGmdv-----aNaSlyd~atA~aEa~~ma~r~~-~~---------~~~~vlv~~~~h 164 (429)
T PF02347_consen 100 YQPEISQGRLQALFEYQSMICELTGMDV-----ANASLYDGATAAAEAMLMAVRAT-KR---------KRNKVLVPESLH 164 (429)
T ss_dssp TSGGGBHHHHHHHHHHHHHHHHHHTSSE-----E-SEBSSCCHHHHHHHHHHHHHH-TT------------EEEEETTS-
T ss_pred CCcHHHHHHHHHHHHHHHHHHHhhCCCc-----cCCCCCChhHHHHHHHHHHHHhc-cc---------CCcEEEEcCCcC
Confidence 6777789999999999999999999985 11234445554433333333322 10 135899999999
Q ss_pred chHHHHHH----hhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCc
Q 018437 165 VCWEKFAR----YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTP 240 (356)
Q Consensus 165 ~s~~~~~~----~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~ 240 (356)
+.+...++ ..|++++.+|.+++ +..| ++++.+|++++||+. |.++|+++|.+++|++ |..
T Consensus 165 P~~~~v~~t~a~~~g~~iv~~~~~~~-~~~d--------~~~~a~v~vq~Pn~~-G~~ed~~~i~~~~h~~------gal 228 (429)
T PF02347_consen 165 PQTRAVLRTYAAPLGIEIVEVPLDED-GTTD--------DDDTAAVMVQNPNTF-GVFEDIKEIADIAHAA------GAL 228 (429)
T ss_dssp CHHHHHHHHHCCHCCEEEEEE-BBTT-CSB---------STTEEEEEEESS-TT-SB--THHHHHHHHHHT------T-E
T ss_pred hhhHHHHHHhhhhCCeEEEEeccccc-CCcc--------ccCeEEEEeecCCCC-ceEeeHHHHHHHHHHc------CCE
Confidence 99877554 46888999998864 6666 678999999999977 9999999999999999 988
Q ss_pred EEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCC-----cCeeEEEEeCCCCCccccccc-----cCCCCCC
Q 018437 241 IHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-----AGVGWVVWRTKDDLPDELVFH-----INYLGSD 310 (356)
Q Consensus 241 l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-----~g~g~l~~~~~~~~~~~~~~~-----~~~~~~~ 310 (356)
+++ ++--.... .-..+-+ .|+|.+ ++.||.++.| +++|++.+|++ +.+.++.. ..--+..
T Consensus 229 ~~~-~ad~~aL~---~l~~Pge---~GADI~-vg~~Q~fg~p~~~GGP~~G~~a~~~~--l~r~lPGRiVG~t~D~~G~~ 298 (429)
T PF02347_consen 229 VIV-GADPNALG---GLKSPGE---YGADIV-VGEHQTFGIPMGFGGPGAGFFAVRED--LVRQLPGRIVGQTKDADGKR 298 (429)
T ss_dssp EEE-CGGCCGCC---TC--GGG---GT-SEE-EECCTTTT---CCC-S--EEEEE-GG--GGGGS-S-EEEEEEBCCCSC
T ss_pred EEE-ecCHHHHh---CcCChhh---cCccEE-eeCCCCCcccCCCCCCCeeeEEEhhh--hhhhCCCceecccccccccc
Confidence 887 55321111 0111233 389999 6668875554 68899999865 22332211 0000100
Q ss_pred ----------C-----CCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 311 ----------Q-----PTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 311 ----------~-----~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
+ .--+--||-++..++..+.++..+|.+|++++.+++..+|+||+
T Consensus 299 ~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~ 358 (429)
T PF02347_consen 299 AFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLA 358 (429)
T ss_dssp CEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 0 00012378888888899999999999999999999999999985
No 61
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.84 E-value=9e-20 Score=178.73 Aligned_cols=193 Identities=15% Similarity=0.167 Sum_probs=144.8
Q ss_pred HHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCC
Q 018437 71 ECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGK 150 (356)
Q Consensus 71 ~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~ 150 (356)
.+.+++.+++..+...|..+++..+++++ +++++|.+. +++|+||++|+..++.++.++
T Consensus 58 a~~~a~~~a~~~g~~~Y~~~~g~~~Lrea----ia~~~~~~~-------vv~t~ggt~A~~~~~~all~p---------- 116 (460)
T PRK13238 58 AMSDRQWAAMMRGDEAYAGSRSYYRLEDA----VKDIFGYPY-------TIPTHQGRAAEQILFPVLIKK---------- 116 (460)
T ss_pred hhhHHHHHHHHhCCcccCCCCCHHHHHHH----HHHHhCCCc-------EEECCCHHHHHHHHHHHhCCC----------
Confidence 46666666665444567777888888776 666777653 799999999999998887543
Q ss_pred CCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-------Ccc--ccCHHHHHHHHhh----CceEEEEecCCCccc-
Q 018437 151 PYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-------GYY--VMNPVKAVELVDE----NTICVAAILGSTLTG- 216 (356)
Q Consensus 151 ~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-------~~~--~~d~~~L~~~i~~----~~~~v~~~~~~~~tG- 216 (356)
++ |+++.+.+.++...+.+.|++++.+++++ +.+ .+|+++|++++++ ++++|++++|+|++|
T Consensus 117 ---GD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG 192 (460)
T PRK13238 117 ---GD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGG 192 (460)
T ss_pred ---CC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCC
Confidence 46 88898878888888899999999999963 124 4999999999984 689999999999998
Q ss_pred cc---CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCC----CCccccc------CCCceEEEEcCCcCCCCCc
Q 018437 217 EF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP----DLEWDFR------LPLVKSINVSGHKYGLVYA 283 (356)
Q Consensus 217 ~~---~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~----~~~~~~~------~~~~Ds~~~~~hK~l~~P~ 283 (356)
.+ +++++|.++|++| |+++++|+|+....+-|... ....++. ...+|++++++||.+++|.
T Consensus 193 ~v~s~~~l~~I~~ia~~~------gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~ 266 (460)
T PRK13238 193 QPVSMANLRAVYEIAKKY------GIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNI 266 (460)
T ss_pred cCCCHHHHHHHHHHHHHc------CCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcc
Confidence 44 4578999999999 99999999773210100100 0011110 1358999999999999999
Q ss_pred CeeEEEEeCCCC
Q 018437 284 GVGWVVWRTKDD 295 (356)
Q Consensus 284 g~g~l~~~~~~~ 295 (356)
| |+++.++.+.
T Consensus 267 G-G~i~~~d~~l 277 (460)
T PRK13238 267 G-GLLCFRDEDL 277 (460)
T ss_pred e-eEEEcChHHH
Confidence 7 8888876433
No 62
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.84 E-value=1.9e-19 Score=172.04 Aligned_cols=191 Identities=16% Similarity=0.090 Sum_probs=143.2
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHH---
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ--- 143 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~--- 143 (356)
.+++++.+++.++.+. . .....+.+++.+++++++|.+. .++|+|+|+|+++++.++..+-.+
T Consensus 24 ~~~~~v~~a~~~~~~~-~------~~~~~~~~~~~~~~a~~~g~~~-------~~~~~g~t~al~~al~al~~~Gd~~~~ 89 (363)
T TIGR01437 24 TVSDEVADAQKRGAQN-Y------FEIKELVNKTGEYIANLLGVED-------AVIVSSASAGIAQSVAAVITRGNRYLV 89 (363)
T ss_pred CCCHHHHHHHHHHHhc-C------CCHHHHHHHHHHHHHHhhCCCe-------EEEEcCHHHHHHHHHHHHhcCCCcchh
Confidence 4668899999888642 1 2355778889999999999864 789999999999999988543000
Q ss_pred HHHhcCCCCCCCeEEecCCCcchH----HHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEE-EecCCCccccc
Q 018437 144 KRKEQGKPYDKPNIVTGANVQVCW----EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVA-AILGSTLTGEF 218 (356)
Q Consensus 144 ~~~~~g~~~~~~~vi~s~~~h~s~----~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~-~~~~~~~tG~~ 218 (356)
.+ .......+++|+++.+.++.+ ...+.+.|+++++++++ +.+|+++++++|+++|++++ +++++|++|.+
T Consensus 90 ~~-~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~---~~~d~~~le~ai~~~t~ai~~v~~~~~~~g~~ 165 (363)
T TIGR01437 90 EN-LHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA---NECSAEQLEAAITEKTAAILYIKSHHCVQKSM 165 (363)
T ss_pred hc-ccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC---CCCCHHHHHHhcChhceEEEEEecCCCCcCCc
Confidence 00 000011234888887544433 56777889999988863 57999999999999998766 57788999999
Q ss_pred CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 219 EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 219 ~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
.|+++|+++|+++ |+++|+|+||+..+ . .+...++|.+++|+||++.+|. .|+++.+
T Consensus 166 ~~~~~i~~~a~~~------gi~vivD~a~~~~~--------~-~~~~~g~D~~~~S~~K~l~gp~-~G~l~~~ 222 (363)
T TIGR01437 166 LSVEDAAQVAQEH------NLPLIVDAAAEEDL--------Q-KYYRLGADLVIYSGAKAIEGPT-SGLVLGK 222 (363)
T ss_pred CCHHHHHHHHHHc------CCeEEEECCCCCch--------H-HHHHcCCCEEEEeCCcccCCCc-eEEEEEc
Confidence 9999999999999 99999999997211 0 1111268999999999999998 7887754
No 63
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.84 E-value=3.3e-19 Score=168.60 Aligned_cols=252 Identities=16% Similarity=-0.005 Sum_probs=174.6
Q ss_pred hHHHHHHHHH-HhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 69 EPECDKLVMA-SINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 69 ~~~v~~~i~~-~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+.+.+.+.+ ..+.+...+...++..++++.+.+++...+|.+.. ....++++|+++++..++.++..+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~---~~~~~~~~~~t~a~~~~~~~~~~~------- 82 (350)
T cd00609 13 PPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVP---PEEIVVTNGAQEALSLLLRALLNP------- 82 (350)
T ss_pred CHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC---cceEEEecCcHHHHHHHHHHhCCC-------
Confidence 3445444443 33334444556678889999999999988775331 134789999999998888877432
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCH--HHHHHHHhhCceEEEEecCCCcccccCCHHHHH
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNP--VKAVELVDENTICVAAILGSTLTGEFEDVKLLH 225 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~--~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~ 225 (356)
+++|+++.+.|.++..+++..|+.++.++.+++ +..+. +.+++.+++++++|++++++|++|.+.|++++.
T Consensus 83 ------g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~ 155 (350)
T cd00609 83 ------GDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEE-GGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELE 155 (350)
T ss_pred ------CCEEEEcCCCchhHHHHHHHCCCEEEEEecccc-cCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHH
Confidence 578999999999999999999999999999764 55554 677777778899999999999999998866555
Q ss_pred ---HHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCC-CCcCeeEEEEeCCCCCccccc
Q 018437 226 ---DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDELV 301 (356)
Q Consensus 226 ---~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~-~P~g~g~l~~~~~~~~~~~~~ 301 (356)
++|+++ |+++|+|++|+++................+.|.+..+.||+++ .+.++|+++.+++... +.+.
T Consensus 156 ~l~~~~~~~------~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~-~~~~ 228 (350)
T cd00609 156 ELAELAKKH------GILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELL-ERLK 228 (350)
T ss_pred HHHHHHHhC------CeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHH-HHHH
Confidence 899999 9999999999876542111000012224467888999999987 5667899987653332 2221
Q ss_pred cccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 302 FHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 302 ~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
....+. .++.+.....++...++... +++++..++..+++++|
T Consensus 229 ~~~~~~---------~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l 271 (350)
T cd00609 229 KLLPYT---------TSGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDAL 271 (350)
T ss_pred HHHHhc---------ccCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHH
Confidence 111111 12334444555666666543 66777777777666665
No 64
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.83 E-value=5.9e-20 Score=176.60 Aligned_cols=248 Identities=10% Similarity=0.010 Sum_probs=172.2
Q ss_pred cCCCChHH-HHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeC-ChhHHHHHHHHHHHHHH
Q 018437 64 VTTWMEPE-CDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTV-GSSEAIMLAGLAFKRKW 141 (356)
Q Consensus 64 ~~~~~~~~-v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~-Ggt~a~~~al~~~~~~~ 141 (356)
.|+.+++. +.+++...+-.+ ...++.+.++.+++++.+++++|.+.+ ..+++++ +||+++..++..+..+
T Consensus 19 Gp~~~~~~~v~~a~~~~~~~~---~hr~~~f~~~~~~~r~~l~~l~~~~~~----~~v~~~~gs~T~~~~~~~~~l~~~- 90 (378)
T PRK03080 19 GPCKKRPGWQLEALADALLGR---SHRQKPVKALLKRVIEGTRELLSLPEG----YEVGIVPGSDTGAWEMALWSLLGA- 90 (378)
T ss_pred CCcCCChHHHHHHHHhhhccc---CcCCHHHHHHHHHHHHHHHHHhCCCCC----ceEEEECCchHHHHHHHHHhcCCC-
Confidence 34455566 888887543311 122346778889999999999999642 2367675 8999999888776321
Q ss_pred HHHHHhcCCCCCCCeEEecCCCcch-HHH-HHHhhCC-eeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCccccc
Q 018437 142 QQKRKEQGKPYDKPNIVTGANVQVC-WEK-FARYFEV-ELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEF 218 (356)
Q Consensus 142 ~~~~~~~g~~~~~~~vi~s~~~h~s-~~~-~~~~~G~-~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~ 218 (356)
++..|+. ...|.+ +.. +++..|+ +++.++.+.+ ..+|+++++. ++.|.+++.+|.||.+
T Consensus 91 -----------~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~~g-~~~d~~~i~~-----~~~V~~~h~~t~tG~~ 152 (378)
T PRK03080 91 -----------RRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEADYG-SLPDLSAVDF-----DRDVVFTWNGTTTGVR 152 (378)
T ss_pred -----------CcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccCCC-CCCCHhhcCC-----CCCEEEEecCCcccee
Confidence 1234554 456665 333 3466799 9999998764 6888877432 5678999999999999
Q ss_pred CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCcc
Q 018437 219 EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPD 298 (356)
Q Consensus 219 ~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~ 298 (356)
.|+++|++ +++ |++++||++++.+..| ++++ .+|.+.+++|||+++|+|+|+++++++. +..
T Consensus 153 ~pi~~I~~--~~~------g~~~vVDa~qs~G~~p-------idv~--~iD~~~~s~~K~l~~P~G~g~l~v~~~~-~~~ 214 (378)
T PRK03080 153 VPVARWIG--ADR------EGLTICDATSAAFALP-------LDWS--KLDVYTFSWQKVLGGEGGHGMAILSPRA-VER 214 (378)
T ss_pred ccchhhcc--ccC------CCeEEEecccccccCC-------CCHH--HCcEEEEehhhhCCCCCceEEEEECHHH-HHh
Confidence 99999998 778 9999999999987663 4544 3799999999999999999999998642 211
Q ss_pred ccccccC-----CC---C-CC----CCCccccCCCChhHHHHHHHHHHHhCHH-HHHHHHHHHHhccCccc
Q 018437 299 ELVFHIN-----YL---G-SD----QPTFTLNFSKGSSQIIAQYYQFIRLGFE-EITFTFISSLKVCPFLV 355 (356)
Q Consensus 299 ~~~~~~~-----~~---~-~~----~~~~~~~~tr~~~~~~~~~~~l~~lg~~-G~~~~~~~~~~~a~~l~ 355 (356)
....... |+ . +. ..+....+|.+.....++..+|+.+-.+ |++++.+++.+++++|.
T Consensus 215 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~ 285 (378)
T PRK03080 215 LESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLY 285 (378)
T ss_pred hhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 1000011 11 0 00 0011122456666667778899999887 89999999988887763
No 65
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.83 E-value=4.5e-19 Score=171.88 Aligned_cols=220 Identities=12% Similarity=0.025 Sum_probs=149.6
Q ss_pred HHHHHHHHHHHhhhcCCCCcccccccCCCChHHHHHHHHHHhccc-----CC--CcccCcchHHHHHHHHHHHHHHhCCC
Q 018437 39 KEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKN-----YV--DMDEYPVTTELQNRCVNMIAHLFNTP 111 (356)
Q Consensus 39 ~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~i~~~~~~~-----~~--~~~~~~~~~~le~~~~~~la~l~g~~ 111 (356)
..++++.+.+....+ +..++|.. .+++.++.+.+++.+.+... ++ .+...+....+++.+++++++++|.+
T Consensus 4 ~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~ 81 (402)
T cd00378 4 DPEIAEIIKKENERQ-RETLELIA-SENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE 81 (402)
T ss_pred CHHHHHHHHHHHHHH-HhCeeeec-cCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC
Confidence 345666665543333 23444422 23455688888887655321 11 12223456678877889999999997
Q ss_pred CCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH-----HHhhCCeeEEEEecCC
Q 018437 112 VADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF-----ARYFEVELKEVKLEEG 186 (356)
Q Consensus 112 ~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~-----~~~~G~~v~~v~~~~~ 186 (356)
. . .++.+||++|+..++.++.++ +++|+++.++|.++... ++..|++++.++++.+
T Consensus 82 ~-----~-~v~~~sgt~a~~~~l~~l~~~-------------Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 142 (402)
T cd00378 82 Y-----A-NVQPHSGSQANLAVYFALLEP-------------GDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVD 142 (402)
T ss_pred c-----e-eeecCCcHHHHHHHHHHhcCC-------------CCEEEEecCccCccccccccccccccceeEEEecCCcC
Confidence 4 2 244446789999888887542 57899999998765332 5567888877877543
Q ss_pred --ccccCHHHHHHHHh-hCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccc
Q 018437 187 --YYVMNPVKAVELVD-ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF 263 (356)
Q Consensus 187 --~~~~d~~~L~~~i~-~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~ 263 (356)
++.+|++++++++. +++++|+++++++ |...|+++|.++|+++ |+++++|++|..+.. ........+
T Consensus 143 ~~~~~id~~~l~~~i~~~~~~~v~~~~~~~--~~~~~~~~I~~l~~~~------~~~li~D~a~~~g~~--~~g~~~~~~ 212 (402)
T cd00378 143 PETGLIDYDALEKMALEFKPKLIVAGASAY--PRPIDFKRFREIADEV------GAYLLVDMAHVAGLV--AGGVFPNPL 212 (402)
T ss_pred cccCCcCHHHHHHHHHhCCCCEEEecCccc--CCCcCHHHHHHHHHhc------CCEEEEEccchhhhh--hcccCCCcc
Confidence 58999999999995 5788888877765 5677999999999999 999999999743322 111111222
Q ss_pred cCCCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 264 RLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 264 ~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
. ++|.++.++||++.+|.| |++++.+
T Consensus 213 ~--~~dv~~~s~sK~l~G~~g-g~i~~~~ 238 (402)
T cd00378 213 P--GADVVTTTTHKTLRGPRG-GLILTRK 238 (402)
T ss_pred c--CCcEEEeccccCCCCCCc-eEEEecc
Confidence 2 679889999999877766 5555554
No 66
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.82 E-value=4.4e-19 Score=171.40 Aligned_cols=210 Identities=16% Similarity=0.149 Sum_probs=159.5
Q ss_pred cccccccCCC-ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 58 LNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 58 ~~l~~~~~~~-~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
++|..+.+.. +++.+.+++.+.+......|...++...+++++.+++.+.+|.+.+. ..+++|+|+++++.+++.+
T Consensus 36 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~---~~i~~t~G~~~al~~~~~~ 112 (391)
T PRK08361 36 ISLGIGEPDFDTPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDV---DNVIVTAGAYEATYLAFES 112 (391)
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCc---ccEEEeCChHHHHHHHHHH
Confidence 3444444443 34677888877765544455556788999999999998887765321 3589999999999998887
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCC-ccccCHHHHHHHHhhCceEEEEecCCCcc
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDENTICVAAILGSTLT 215 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (356)
+..+ ++.|++++++|..+...++..|++++.+|++++ ++.+|+++|++++++++++|++++|+|||
T Consensus 113 l~~~-------------g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPt 179 (391)
T PRK08361 113 LLEE-------------GDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPT 179 (391)
T ss_pred hcCC-------------CCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCCC
Confidence 7542 578999999999999999999999999999753 47899999999999889999999999999
Q ss_pred cccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCc-ccccCCCceEEEEcCCcCCCCC-cCeeEEEE
Q 018437 216 GEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFRLPLVKSINVSGHKYGLVY-AGVGWVVW 290 (356)
Q Consensus 216 G~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~~~~~Ds~~~~~hK~l~~P-~g~g~l~~ 290 (356)
|.+.| +++|.++|+++ ++++++|++|+.+..+- ..... ..+ ....+.++.+++|.++.| ..+|+++.
T Consensus 180 G~~~~~~~~~~l~~~~~~~------~~~ii~De~y~~~~~~~-~~~~~~~~~-~~~~~i~~~s~SK~~~~~GlRiG~~~~ 251 (391)
T PRK08361 180 GATLDKEVAKAIADIAEDY------NIYILSDEPYEHFLYEG-AKHYPMIKY-APDNTILANSFSKTFAMTGWRLGFVIA 251 (391)
T ss_pred CcCcCHHHHHHHHHHHHHc------CeEEEEEcccccceeCC-CCCCCHhhc-CCCCEEEEecCchhcCCcHhhhhhhcc
Confidence 99988 88899999999 99999999998764310 01011 111 123467778999987433 23899987
Q ss_pred e
Q 018437 291 R 291 (356)
Q Consensus 291 ~ 291 (356)
.
T Consensus 252 ~ 252 (391)
T PRK08361 252 P 252 (391)
T ss_pred C
Confidence 4
No 67
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.82 E-value=1.5e-18 Score=169.44 Aligned_cols=215 Identities=15% Similarity=0.095 Sum_probs=161.7
Q ss_pred CCCCcccccccCC-----CChHHHHHHHHHHhcccC-CCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChh
Q 018437 54 GNPRLNLASFVTT-----WMEPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (356)
Q Consensus 54 ~~~~~~l~~~~~~-----~~~~~v~~~i~~~~~~~~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt 127 (356)
+.+.++|+.+.|+ .+++.+.+++.+++..+. ..|....+..++++.+.+++.+.+|.+.+. ..+++|+|++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~---~~v~it~G~~ 127 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELST---DDIYLTAGCA 127 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCCh---hhEEEeCCHH
Confidence 4556677776664 234678888888776432 245555688889999888888777765422 4589999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEE
Q 018437 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICV 206 (356)
Q Consensus 128 ~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v 206 (356)
+|+.+++.++.++ +++|+++.|+|+.+...+...|++++.+++.+ ++|.+|+++|+++++++++++
T Consensus 128 ~al~l~~~~l~~~-------------Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i 194 (430)
T PLN00145 128 QAIEIIMSVLAQP-------------GANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENTVAM 194 (430)
T ss_pred HHHHHHHHHhcCC-------------CCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCceEE
Confidence 9999998887542 57999999999999999999999999999743 358999999999999999999
Q ss_pred EEecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcc-cccCCCceEEE-EcCCcC-CC
Q 018437 207 AAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSIN-VSGHKY-GL 280 (356)
Q Consensus 207 ~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~Ds~~-~~~hK~-l~ 280 (356)
++++|+||||.+.+ +++|.++|+++ ++++++|++|+.+...- .+..+. .+. .....++ -|..|. +.
T Consensus 195 ~i~~P~NPtG~v~~~~~l~~i~~~a~~~------~i~ii~De~Y~~~~~~~-~~~~~~~~~~-~~~~vi~~~S~SK~~~~ 266 (430)
T PLN00145 195 VIINPNNPCGSVYSYEHLAKIAETARKL------GILVIADEVYDHLTFGS-KPFVPMGVFG-EVAPVLTLGSISKRWVV 266 (430)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHc------CCEEEEeccchhhccCC-CCccchhhhc-ccCcEEEEeccccccCC
Confidence 99999999999977 78888999999 99999999998754310 010111 111 1112333 347786 66
Q ss_pred CCcCeeEEEEeC
Q 018437 281 VYAGVGWVVWRT 292 (356)
Q Consensus 281 ~P~g~g~l~~~~ 292 (356)
..+.+|+++..+
T Consensus 267 pG~RlG~iv~~~ 278 (430)
T PLN00145 267 PGWRLGWIATCD 278 (430)
T ss_pred CCeeEEEEEEec
Confidence 778999998754
No 68
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.82 E-value=5.7e-19 Score=172.01 Aligned_cols=273 Identities=12% Similarity=-0.001 Sum_probs=170.0
Q ss_pred HHHHHHHHHHhhhcCCCCcccccccCCCChHHHHHHHHHHhccc-C-CCcc-----cCcchHHHHHHHHHHHHHHhCCCC
Q 018437 40 EAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKN-Y-VDMD-----EYPVTTELQNRCVNMIAHLFNTPV 112 (356)
Q Consensus 40 ~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~i~~~~~~~-~-~~~~-----~~~~~~~le~~~~~~la~l~g~~~ 112 (356)
.++.+.+++...... ...+|... .+++++.+.+++...+... . +.+. ..+....+|+.+++++++++|.+.
T Consensus 11 ~~~~~~~~~~~~~~~-~~~~l~~~-~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~ 88 (416)
T PRK00011 11 PEIADAIEQELKRQE-EHIELIAS-ENFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEY 88 (416)
T ss_pred HHHHHHHHHHHHHHh-cCeeeecc-cCcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCc
Confidence 456666655333321 22333332 2245678888886654321 1 1111 122455677668889999999975
Q ss_pred CCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH---H--HHhhCCeeEEEEecCCc
Q 018437 113 ADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK---F--ARYFEVELKEVKLEEGY 187 (356)
Q Consensus 113 ~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~---~--~~~~G~~v~~v~~~~~~ 187 (356)
.. ++.++||+|+..++.++..+ +++|+++.++|.++.. . ....|++++.++++.++
T Consensus 89 -----~~-i~~~sgt~al~~~l~~l~~~-------------gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 149 (416)
T PRK00011 89 -----AN-VQPHSGSQANAAVYFALLKP-------------GDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEET 149 (416)
T ss_pred -----ee-eecCCchHHHHHHHHHhcCC-------------CCEEEEeccccCCccccccccccccceeeEeecCcCccc
Confidence 22 34345688988888776432 5789999999876432 1 12346778888887545
Q ss_pred cccCHHHHHHHHhh-CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCC
Q 018437 188 YVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLP 266 (356)
Q Consensus 188 ~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 266 (356)
+.+|+++|++++++ ++++|+++.+ .+|...|+++|.++|+++ |+++++|+||..+... ....+..+.
T Consensus 150 ~~~d~~~l~~~i~~~~~k~v~~~~~--~~~~~~~~~~I~~la~~~------~~~livD~a~~~g~~~--~g~~~~~~~-- 217 (416)
T PRK00011 150 GLIDYDEVEKLALEHKPKLIIAGAS--AYSRPIDFKRFREIADEV------GAYLMVDMAHIAGLVA--AGVHPSPVP-- 217 (416)
T ss_pred CCcCHHHHHHHHHhcCCCEEEECCC--cCCCccCHHHHHHHHHHc------CCEEEEECcchhcccc--cCccCCCCC--
Confidence 89999999999975 7888877643 346778999999999999 9999999998644331 111122222
Q ss_pred CceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHH
Q 018437 267 LVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFIS 346 (356)
Q Consensus 267 ~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~ 346 (356)
++|.++.++||++.+|.| |++++.+++.. +.+.. ..+.+ ..++......+++..++.....++++++.++
T Consensus 218 ~~di~~~S~~K~l~g~~g-g~i~~~~~~~~-~~l~~-~~~~~-------~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~ 287 (416)
T PRK00011 218 HADVVTTTTHKTLRGPRG-GLILTNDEELA-KKINS-AVFPG-------IQGGPLMHVIAAKAVAFKEALEPEFKEYAQQ 287 (416)
T ss_pred CCcEEEecCCcCCCCCCc-eEEEeCCHHHH-HHHHH-HhCcc-------ccCCccHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 689999999999877776 56666543332 22111 11111 1123333345555556655556677777777
Q ss_pred HHhccCccc
Q 018437 347 SLKVCPFLV 355 (356)
Q Consensus 347 ~~~~a~~l~ 355 (356)
..++++++.
T Consensus 288 ~~~~~~~l~ 296 (416)
T PRK00011 288 VVKNAKALA 296 (416)
T ss_pred HHHHHHHHH
Confidence 777776653
No 69
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.82 E-value=7.7e-20 Score=172.92 Aligned_cols=188 Identities=18% Similarity=0.070 Sum_probs=134.8
Q ss_pred cccCCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHH
Q 018437 62 SFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (356)
Q Consensus 62 ~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~ 141 (356)
+..+..+++.+.+++.++.... ..+...+ ..+++++++++++| +. .+++++|||+++..++.++..+
T Consensus 4 ~~~~~~~~~~v~~a~~~~~~~~-~~~~~~~----~~~~l~~~~a~~~g-~~------~~~~~~~gt~a~~~~~~~l~~~- 70 (338)
T cd06502 4 SDTVTGPTPEMLEAMAAANVGD-DVYGEDP----TTAKLEARAAELFG-KE------AALFVPSGTAANQLALAAHTQP- 70 (338)
T ss_pred cccCCCCCHHHHHHHHhcccCC-cccCCCH----HHHHHHHHHHHHhC-CC------eEEEecCchHHHHHHHHHhcCC-
Confidence 3445566788888887754322 1222222 34566677999999 32 3789999999999888876532
Q ss_pred HHHHHhcCCCCCCCeEEecCCCcchHHH---HHHhhCCeeEEEEecCCccccCHHHHHHHHhh-------CceEEEEecC
Q 018437 142 QQKRKEQGKPYDKPNIVTGANVQVCWEK---FARYFEVELKEVKLEEGYYVMNPVKAVELVDE-------NTICVAAILG 211 (356)
Q Consensus 142 ~~~~~~~g~~~~~~~vi~s~~~h~s~~~---~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-------~~~~v~~~~~ 211 (356)
+++|+++.++|.++.. .+...|++++.++.+. +.+|+++|++++++ ++++|++++|
T Consensus 71 ------------gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p 136 (338)
T cd06502 71 ------------GGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGEN--GKLTPEDLEAAIRPRDDIHFPPPSLVSLENT 136 (338)
T ss_pred ------------CCeEEEecCcceeeecCCcHHHHcCceEEeecCCC--CcCCHHHHHHHhhccCCCcCCcceEEEEEee
Confidence 5789999999987553 3456799999999753 78999999999975 6889999999
Q ss_pred CCcccc--cCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcC
Q 018437 212 STLTGE--FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG 284 (356)
Q Consensus 212 ~~~tG~--~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g 284 (356)
+|+.|. .+++++|.++|+++ ++++|+|+||..+..... .. .......++|.++.++|||++.|.|
T Consensus 137 ~n~g~~~~~~~l~~i~~~~~~~------~~~livDea~~~~~~~~~-~~-~~~~~~~~~d~~~~s~sK~~~~~~g 203 (338)
T cd06502 137 TEGGTVYPLDELKAISALAKEN------GLPLHLDGARLANAAAAL-GV-ALKTYKSGVDSVSFCLSKGGGAPVG 203 (338)
T ss_pred cCCccccCHHHHHHHHHHHHHc------CCeEeechHHHHHHHHhc-CC-CHHHHHhcCCEEEEeccccCCCccc
Confidence 997442 36788899999999 999999999854322100 11 1111124689999999999987754
No 70
>PLN02656 tyrosine transaminase
Probab=99.82 E-value=1.3e-18 Score=169.21 Aligned_cols=217 Identities=16% Similarity=0.097 Sum_probs=164.2
Q ss_pred cCCCCcccccccCC-----CChHHHHHHHHHHhccc-CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCh
Q 018437 53 DGNPRLNLASFVTT-----WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGS 126 (356)
Q Consensus 53 ~~~~~~~l~~~~~~-----~~~~~v~~~i~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Gg 126 (356)
.+...++|..+.|. ++++.+.+++.+++..+ ...|....+..++++++.+++.+.+|.+.+. ..+++|+|+
T Consensus 29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~---~~i~~t~G~ 105 (409)
T PLN02656 29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSL---DDVFITSGC 105 (409)
T ss_pred cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCc---ccEEEeCCh
Confidence 44555677777775 34578888888877654 3456666788899999999998877765422 358899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceE
Q 018437 127 SEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTIC 205 (356)
Q Consensus 127 t~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~ 205 (356)
++++.+++.++.++ +++|++++++|..+...++..|++++.+|+++ +++.+|+++|++++++++++
T Consensus 106 ~~al~~~~~~l~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~ 172 (409)
T PLN02656 106 TQAIDVALSMLARP-------------GANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVA 172 (409)
T ss_pred HHHHHHHHHHHhCC-------------CCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceE
Confidence 99999998877543 57899999999999999999999999999953 34789999999999888999
Q ss_pred EEEecCCCccccc---CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcc-cccCCCceEEEEcCCcC-CC
Q 018437 206 VAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKY-GL 280 (356)
Q Consensus 206 v~~~~~~~~tG~~---~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~Ds~~~~~hK~-l~ 280 (356)
|++++|+||||.+ +++++|.++|+++ ++++++|++|+.+...- ....+. .+....--.+.-|+.|. +.
T Consensus 173 v~l~~P~NPtG~~~s~~~~~~i~~~a~~~------~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~f~~ 245 (409)
T PLN02656 173 LVIINPGNPCGNVYSYQHLKKIAETAEKL------KILVIADEVYGHLAFGS-NPFVPMGVFGSIVPVLTLGSLSKRWIV 245 (409)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHc------CCEEEEehhhhhcccCC-CCcccHHHhcccCcEEEEcccchhccC
Confidence 9999999999998 5788999999999 99999999998754310 000111 11100011234458897 66
Q ss_pred CCcCeeEEEEeC
Q 018437 281 VYAGVGWVVWRT 292 (356)
Q Consensus 281 ~P~g~g~l~~~~ 292 (356)
....+|+++..+
T Consensus 246 pGlRiG~~i~~~ 257 (409)
T PLN02656 246 PGWRLGWFVTTD 257 (409)
T ss_pred cceeEEEEEEeC
Confidence 678999999853
No 71
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.82 E-value=5.6e-19 Score=169.88 Aligned_cols=185 Identities=12% Similarity=0.084 Sum_probs=140.5
Q ss_pred HHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHH-HHHHHHHHHhc
Q 018437 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF-KRKWQQKRKEQ 148 (356)
Q Consensus 70 ~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~-~~~~~~~~~~~ 148 (356)
+...+++.+.+..+... ..+...++|++ +++++|.+. .++++|||+|+.+++.++ ..+
T Consensus 14 ~~e~~~~~~~l~~~~~~--~g~~~~~le~~----la~~~g~~~-------~v~~~sgt~al~lal~al~~~~-------- 72 (379)
T PRK11658 14 DEELAAVKEVLRSGWIT--TGPKNQALEQA----FCQLTGNQH-------AIAVSSATAGMHITLMALGIGP-------- 72 (379)
T ss_pred HHHHHHHHHHHHcCCcc--CCHhHHHHHHH----HHHHhCCCe-------EEEECCHHHHHHHHHHHcCCCC--------
Confidence 34456666666544332 24555566655 888888864 688899999999998876 221
Q ss_pred CCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHH
Q 018437 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLL 228 (356)
Q Consensus 149 g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~ 228 (356)
+++|+++.++|.++..++...|++++.++++.+++.+|+++|++++++++++|+ +++++|...|+++|.++|
T Consensus 73 -----Gd~Viv~~~~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~d~~~i~~~a 144 (379)
T PRK11658 73 -----GDEVITPSLTWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITPRTKAII---PVHYAGAPADLDAIRAIG 144 (379)
T ss_pred -----CCEEEECCCcHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcccCCeEEE---EeCCCCCcCCHHHHHHHH
Confidence 579999999999999999999999999999876678999999999998998887 556689999999999999
Q ss_pred HHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCC
Q 018437 229 TKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (356)
Q Consensus 229 ~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~ 295 (356)
+++ |+++++|+|++.+... .+. .....+++.++++.+|.+.++.| |+++..+++.
T Consensus 145 ~~~------gi~vi~D~a~a~g~~~--~~~---~~g~~g~~~~Sf~~~K~l~~g~G-G~v~~~~~~~ 199 (379)
T PRK11658 145 ERY------GIPVIEDAAHAVGTYY--KGR---HIGARGTAIFSFHAIKNITCAEG-GLVVTDDDEL 199 (379)
T ss_pred HHc------CCeEEEECCCccCCeE--CCe---ecCCCCCEEEeCCCCCcCcccCc-eEEEECCHHH
Confidence 999 9999999999754331 111 12223568889999999866543 5665554443
No 72
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.82 E-value=7.2e-19 Score=169.24 Aligned_cols=212 Identities=13% Similarity=-0.001 Sum_probs=159.6
Q ss_pred cccccccCCCC-hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 58 LNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 58 ~~l~~~~~~~~-~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
++|+.+.+..+ ++.+.+++.+.+......|....+...+++++.+++.+.+|...+. ..+++|+|+++++..++.+
T Consensus 27 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~---~~i~~t~g~~~al~~~~~~ 103 (382)
T PRK06108 27 LPLWFGESDLPTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPP---ERIAVTSSGVQALMLAAQA 103 (382)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCc---ceEEEeCChHHHHHHHHHH
Confidence 45555555443 5688888887765543446666788899999999999998944321 3488999999999888887
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC--CccccCHHHHHHHHhhCceEEEEecCCCc
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE--GYYVMNPVKAVELVDENTICVAAILGSTL 214 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~--~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (356)
+.++ ++.|+++.++|..+...++..|++++.+|++. +++.+|+++|++.+++++++|++++|+||
T Consensus 104 l~~~-------------gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NP 170 (382)
T PRK06108 104 LVGP-------------GDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNP 170 (382)
T ss_pred hcCC-------------CCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCC
Confidence 6542 57899999999999999999999999999963 24789999999999888999999999999
Q ss_pred ccccC---CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCc--ccccC-CCceEEEEcCCcCCC-CCcCeeE
Q 018437 215 TGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDFRL-PLVKSINVSGHKYGL-VYAGVGW 287 (356)
Q Consensus 215 tG~~~---~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~~~-~~~Ds~~~~~hK~l~-~P~g~g~ 287 (356)
||.+- ++++|.++|+++ ++++++|++|+.+.... ..... .++.. ..-..+..+.+|.++ .+..+|+
T Consensus 171 tG~~~~~~~~~~l~~~~~~~------~~~li~De~y~~~~~~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~ 243 (382)
T PRK06108 171 TGWTASRDDLRAILAHCRRH------GLWIVADEVYERLYYAP-GGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGW 243 (382)
T ss_pred CCcccCHHHHHHHHHHHHHC------CcEEEEehhhhhhccCC-CCCCCCHhhcCCCcCCEEEEeechhhccCcccceee
Confidence 99875 568899999999 99999999998865420 00100 11111 123456678999753 4567899
Q ss_pred EEEeC
Q 018437 288 VVWRT 292 (356)
Q Consensus 288 l~~~~ 292 (356)
++..+
T Consensus 244 ~~~~~ 248 (382)
T PRK06108 244 LVAPP 248 (382)
T ss_pred eeCCH
Confidence 98743
No 73
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.82 E-value=8.1e-20 Score=174.24 Aligned_cols=254 Identities=15% Similarity=0.011 Sum_probs=172.9
Q ss_pred cCCCChHHHHHHHHHHhc----ccCCCcccC---cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCC-hhHHHHHHHH
Q 018437 64 VTTWMEPECDKLVMASIN----KNYVDMDEY---PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVG-SSEAIMLAGL 135 (356)
Q Consensus 64 ~~~~~~~~v~~~i~~~~~----~~~~~~~~~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~G-gt~a~~~al~ 135 (356)
.|...++.|.+++..++. .+.+.+..+ +.+.++.+++++.+++++|.+.+ ..+++|+| +|+++..++.
T Consensus 6 Gp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~----~~vvf~~gs~T~a~~~~~~ 81 (355)
T cd00611 6 GPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDN----YKVLFLQGGATGQFAAVPL 81 (355)
T ss_pred CCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC----ceEEEEcCCchHHHHHHHH
Confidence 344566889999988773 222233333 45668888999999999998532 34889888 9999999988
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCcccc-C-HHHHHHHHhhCceEEEEecCCC
Q 018437 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVM-N-PVKAVELVDENTICVAAILGST 213 (356)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~-d-~~~L~~~i~~~~~~v~~~~~~~ 213 (356)
.+..+ + ..+++|++....|.+ .+.++..|++++.++++++ +.. + ++..+..+++++++|.+++.+|
T Consensus 82 ~l~~~--------~--~~~~~i~~g~~~~~~-~~~a~~~g~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~lV~~~h~~t 149 (355)
T cd00611 82 NLLGD--------K--GTADYVVTGAWSAKA-AKEAKRYGGVVVIVAAKEE-GKYTKIPDVETWDLAPDAAYVHYCSNET 149 (355)
T ss_pred hcCCC--------C--CeEEEEECCHHHHHH-HHHHHhcCCCcEEEecccc-cCCCCCCCHhhcCCCCCCCEEEEeCCcc
Confidence 77321 0 012455554444433 4566778999999998643 222 4 3333344667899999999999
Q ss_pred cccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCC
Q 018437 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 214 ~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~ 293 (356)
.||... . ++++.+ |++++||+++..+..| ++++. .|....++||++ +|+|+|+++++++
T Consensus 150 ~tG~~~--~---~i~~~~------g~~~~VDa~qs~g~~~-------idv~~--~~~~~ss~~K~l-GP~G~g~l~~~~~ 208 (355)
T cd00611 150 IHGVEF--D---EVPDTG------GVPLVADMSSNILSRP-------IDVSK--FGVIYAGAQKNL-GPAGVTVVIVRKD 208 (355)
T ss_pred cccEEc--c---eecccC------CCeEEEEccccccCCC-------CCHHH--hCEEEeeccccc-CCCceEEEEECHH
Confidence 999982 2 445558 9999999999887663 45442 233445699976 6999999999865
Q ss_pred CCCccccccccCCCCCC--CCCccccCCCChhHHHHHHHHHHHhCHH-HHHHHHHHHHhccCccc
Q 018437 294 DDLPDELVFHINYLGSD--QPTFTLNFSKGSSQIIAQYYQFIRLGFE-EITFTFISSLKVCPFLV 355 (356)
Q Consensus 294 ~~~~~~~~~~~~~~~~~--~~~~~~~~tr~~~~~~~~~~~l~~lg~~-G~~~~~~~~~~~a~~l~ 355 (356)
.+. +.-...+.+.... .......||++...++++.++++.+-.+ |++++.+++.+++++|.
T Consensus 209 ~~~-~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~ 272 (355)
T cd00611 209 LLG-KARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLY 272 (355)
T ss_pred HHh-hcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 221 1000111111110 0111125899999999999999999888 79999999999998874
No 74
>PLN00175 aminotransferase family protein; Provisional
Probab=99.82 E-value=1.4e-18 Score=169.08 Aligned_cols=213 Identities=13% Similarity=0.039 Sum_probs=162.6
Q ss_pred CCcccccccCCCC-hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHH
Q 018437 56 PRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (356)
Q Consensus 56 ~~~~l~~~~~~~~-~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (356)
+.++|+.+.|..+ ++.+.+++.+++......|....+..++++++.+++.+.+|.+.+. ...+++|+|+++++..++
T Consensus 55 ~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~--~~~I~vt~G~~~al~~~~ 132 (413)
T PLN00175 55 GAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDP--EKEVTVTSGCTEAIAATI 132 (413)
T ss_pred CeEecCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCCEEEeCCHHHHHHHHH
Confidence 4456666666644 4677888887776543456666688999999999999988876422 124889999999998888
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCc
Q 018437 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (356)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (356)
.++.++ +++|++++|.|..+...++..|++++.|+++++++.+|+++|++++.+++++|++++|+||
T Consensus 133 ~~l~~~-------------gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~~~k~i~i~~p~NP 199 (413)
T PLN00175 133 LGLINP-------------GDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTSKTRAILINTPHNP 199 (413)
T ss_pred HHhCCC-------------CCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCcCceEEEecCCCCC
Confidence 876543 5799999999999999999999999999997545899999999999888999999999999
Q ss_pred ccccC---CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCc-cccc-CCCceEEEEcCCcCCC-CCcCeeEE
Q 018437 215 TGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFR-LPLVKSINVSGHKYGL-VYAGVGWV 288 (356)
Q Consensus 215 tG~~~---~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~-~~~~Ds~~~~~hK~l~-~P~g~g~l 288 (356)
||.+. ++++|.++|+++ ++|+++|++|..+... ..... ..+. ...-..+..|+.|.++ ....+|++
T Consensus 200 tG~~~s~~~l~~l~~~a~~~------~~~ii~De~Y~~l~~~--~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~ 271 (413)
T PLN00175 200 TGKMFTREELELIASLCKEN------DVLAFTDEVYDKLAFE--GDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWA 271 (413)
T ss_pred CCcCCCHHHHHHHHHHHHHc------CcEEEEecccCccccC--CcccChhhCCCCcCcEEEEecchhhccCcchheeee
Confidence 99985 577899999999 9999999999876431 11000 1111 1122344566889876 55789998
Q ss_pred EEe
Q 018437 289 VWR 291 (356)
Q Consensus 289 ~~~ 291 (356)
+..
T Consensus 272 v~~ 274 (413)
T PLN00175 272 IAP 274 (413)
T ss_pred EeC
Confidence 864
No 75
>PRK08960 hypothetical protein; Provisional
Probab=99.81 E-value=1.6e-18 Score=167.29 Aligned_cols=211 Identities=16% Similarity=0.093 Sum_probs=158.6
Q ss_pred CcccccccCCC-ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHH
Q 018437 57 RLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (356)
Q Consensus 57 ~~~l~~~~~~~-~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (356)
.++|..+.+++ +++.+.+++.+.+..+...|....+..++++.+.+++.+.+|.+.+. ..+++|+|+++++..++.
T Consensus 34 ~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~---~~i~it~G~~~al~~~~~ 110 (387)
T PRK08960 34 VIHLEIGEPDFTTAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDP---ERILVTPGGSGALLLASS 110 (387)
T ss_pred eEEeCCCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCCh---hhEEEccCcHHHHHHHHH
Confidence 34566666663 46788888888776444455556788889999999988887765422 458999999999999888
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCC-ccccCHHHHHHHHhhCceEEEEecCCCc
Q 018437 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDENTICVAAILGSTL 214 (356)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (356)
++.++ +++|++++++|+.+...++..|.+++.+|++++ ++.+|++.|+++++++++++++++|+||
T Consensus 111 ~~~~~-------------gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NP 177 (387)
T PRK08960 111 LLVDP-------------GKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASPANP 177 (387)
T ss_pred HhcCC-------------CCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCccceEEEEECCCCC
Confidence 77542 579999999999999999999999999999753 4789999999999988899999999999
Q ss_pred ccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCC-CCcCeeEEEE
Q 018437 215 TGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVW 290 (356)
Q Consensus 215 tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~-~P~g~g~l~~ 290 (356)
||.+.+ +++|+++|+++ ++++++|++|..+... +....-+....-..+..|.+|.++ ....+|+++.
T Consensus 178 tG~~~~~~~~~~l~~~~~~~------~~~li~De~Y~~~~~~---~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~ 248 (387)
T PRK08960 178 TGTLLSRDELAALSQALRAR------GGHLVVDEIYHGLTYG---VDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLVA 248 (387)
T ss_pred CCcCcCHHHHHHHHHHHHHc------CCEEEEEccccccccC---CCCCChhhccCCEEEEeecccccCCcccEEEEEEc
Confidence 999866 55677788999 9999999999875431 111111112111234456999763 4456999987
Q ss_pred eC
Q 018437 291 RT 292 (356)
Q Consensus 291 ~~ 292 (356)
.+
T Consensus 249 ~~ 250 (387)
T PRK08960 249 PP 250 (387)
T ss_pred CH
Confidence 53
No 76
>PRK12414 putative aminotransferase; Provisional
Probab=99.81 E-value=3.1e-18 Score=165.12 Aligned_cols=212 Identities=14% Similarity=0.037 Sum_probs=158.5
Q ss_pred cccccccCCC-ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 58 LNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 58 ~~l~~~~~~~-~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
++|+.+.+.. +++.+.+++.+.+......|....+...+++++.+++++++|++.+. ...+++|+|+++++..++.+
T Consensus 32 i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~--~~~i~it~g~~~al~~~~~~ 109 (384)
T PRK12414 32 LNLSQGAPNFAPDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDP--ASEVTVIASASEGLYAAISA 109 (384)
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCC--CCcEEEECChHHHHHHHHHH
Confidence 4455554443 35677787776654333445555688899999999999999986311 12489999999999988887
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCccc
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG 216 (356)
+.++ +++|+++.++|..+...++..|++++.+|++++++.+|++.|++++++++++|++++|+||||
T Consensus 110 l~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG 176 (384)
T PRK12414 110 LVHP-------------GDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAITPRTRMIIVNTPHNPSA 176 (384)
T ss_pred hcCC-------------CCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcCcccEEEEEcCCCCCCC
Confidence 7543 578999999999999999999999999999764588999999999988899999999999999
Q ss_pred cc---CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCc-cccc-CCCceEEEEcCCcCCC-CCcCeeEEEE
Q 018437 217 EF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFR-LPLVKSINVSGHKYGL-VYAGVGWVVW 290 (356)
Q Consensus 217 ~~---~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~-~~~~Ds~~~~~hK~l~-~P~g~g~l~~ 290 (356)
.+ +++++|.++|+++ ++++++|++|..+...- .+... ..+. ...-..+..|+.|.++ ....+|+++.
T Consensus 177 ~~~s~~~~~~i~~~a~~~------~~~ii~De~Y~~~~~~~-~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~ 249 (384)
T PRK12414 177 TVFSAADLARLAQLTRNT------DIVILSDEVYEHVVFDG-ARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLA 249 (384)
T ss_pred cCCCHHHHHHHHHHHHHC------CeEEEEhhhhhhccCCC-CCccCcccCcCccCcEEEEecccccccCccceEEEEec
Confidence 97 5688899999999 99999999998654310 00000 0111 1112355667899774 5567899986
Q ss_pred e
Q 018437 291 R 291 (356)
Q Consensus 291 ~ 291 (356)
.
T Consensus 250 ~ 250 (384)
T PRK12414 250 P 250 (384)
T ss_pred C
Confidence 4
No 77
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.81 E-value=5.6e-18 Score=164.65 Aligned_cols=233 Identities=13% Similarity=0.095 Sum_probs=170.9
Q ss_pred CHHHHHHHHHHHhhhcC-CCCcccccccCC-----CChHHHHHHHHHHhccc-CCCcccCcchHHHHHHHHHHHHHHhCC
Q 018437 38 PKEAAYQVINDELMLDG-NPRLNLASFVTT-----WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNT 110 (356)
Q Consensus 38 ~~~~i~~~~~~~~~~~~-~~~~~l~~~~~~-----~~~~~v~~~i~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~ 110 (356)
+..+..+.+.+.+..+. .+.++|+.+.+. .+++.+.+++.++++.. ...|....+...+++++.+++.+.+|.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~ 93 (409)
T PLN00143 14 SIDDAVKFLKENFNEDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPY 93 (409)
T ss_pred hHHHHHHHHHHhcccCCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCC
Confidence 34555555555444333 344577777775 45568888888877643 234556668888999999998887776
Q ss_pred CCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec-CCccc
Q 018437 111 PVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYV 189 (356)
Q Consensus 111 ~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~ 189 (356)
+.+. ..+++|+|+++++.+++.++.++ ++.|+++.|+|+.+...++..|++++.++++ ++++.
T Consensus 94 ~~~~---~~I~it~G~~~al~~~~~~l~~~-------------gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 157 (409)
T PLN00143 94 QLSP---DDVYLTLGCKHAAEIIIKVLARP-------------EANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWE 157 (409)
T ss_pred CCCH---hhEEEecChHHHHHHHHHHHcCC-------------CCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCc
Confidence 5422 45899999999999999887653 5799999999999999999999999999985 34588
Q ss_pred cCHHHHHHHHhhCceEEEEecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcc-cccC
Q 018437 190 MNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRL 265 (356)
Q Consensus 190 ~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~ 265 (356)
+|+++|+++++++++++++++|+||||.+.+ +++|.++|+++ ++++++|++|..+...- .+..+. .+..
T Consensus 158 ~d~~~l~~~~~~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~------~~~ii~De~Y~~l~~~~-~~~~~~~~~~~ 230 (409)
T PLN00143 158 VDLDAVEAIADENTIAMVIINPGNPCGSVYSYEHLNKIAETARKL------GILVIADEVYGHIVFGS-KPFVPMGLFAS 230 (409)
T ss_pred CCHHHHHHhcccCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHc------CCeEEEEccccccccCC-CCCcchhhhcc
Confidence 9999999999888999999999999999966 67788899999 99999999998754310 000111 1110
Q ss_pred CCceEEEEcCCcC-CCCCcCeeEEEEeCC
Q 018437 266 PLVKSINVSGHKY-GLVYAGVGWVVWRTK 293 (356)
Q Consensus 266 ~~~Ds~~~~~hK~-l~~P~g~g~l~~~~~ 293 (356)
..--.+..|+.|. +.....+|+++..++
T Consensus 231 ~~~vi~~~SfSK~f~~pGlRvG~~v~~~p 259 (409)
T PLN00143 231 IVPVITLGSISKRWMIPGWGLGWLVTCDP 259 (409)
T ss_pred cCcEEEEccchhhcCCCccceEEEEeeCc
Confidence 0011344568897 667789999988543
No 78
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.81 E-value=1.7e-18 Score=167.29 Aligned_cols=188 Identities=13% Similarity=-0.020 Sum_probs=139.3
Q ss_pred hHHHHHHHHHHhcccCCCcccCc---chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHH
Q 018437 69 EPECDKLVMASINKNYVDMDEYP---VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (356)
+|.+.+++.+++......+..+. +...+..++++.+++++|.+. .++++||++|+..++.++.++
T Consensus 54 ~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g~~~-------~ii~~~~~~a~~~~~~~l~~~----- 121 (393)
T TIGR01822 54 HPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLGTED-------TILYASCFDANGGLFETLLGA----- 121 (393)
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCCc-------EEEECchHHHHHHHHHHhCCC-----
Confidence 57788887777765322222322 545566677788999999864 677789999999877766432
Q ss_pred HhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh------CceEEEEecCCCcccccC
Q 018437 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFE 219 (356)
Q Consensus 146 ~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~ 219 (356)
+++|+++.++|+++...++..+...+.++ .+|+++|++++.+ ++++|++.+.+|++|.+.
T Consensus 122 --------gd~vi~~~~~~~s~~~~~~~~~~~~~~~~------~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~ 187 (393)
T TIGR01822 122 --------EDAIISDALNHASIIDGVRLCKAKRYRYA------NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIA 187 (393)
T ss_pred --------CCEEEEeccccHHHHHHHHhcCCceEEeC------CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcC
Confidence 57999999999999998888777664332 4789999998875 678888888999999999
Q ss_pred CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCC---cccccCCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 220 DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL---EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 220 ~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~---~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
|+++|.++|++| ++++++|++|+.+..+. .... ..++ ..++|.++.++||++.++ ..|+++.+
T Consensus 188 ~l~~i~~la~~~------~~~li~De~~~~g~~~~-~~~~~~~~~~~-~~~~di~~~s~sK~l~g~-r~G~~~~~ 253 (393)
T TIGR01822 188 PLDEICDLADKY------DALVMVDECHATGFLGP-TGRGSHELCGV-MGRVDIITGTLGKALGGA-SGGFTTAR 253 (393)
T ss_pred CHHHHHHHHHHc------CCEEEEECCccccCcCC-CCCchHHhcCC-CCCCeEEEEEChHHhhCC-CcEEEEeC
Confidence 999999999999 99999999996544321 1000 0111 236899999999998654 56887754
No 79
>PRK08912 hypothetical protein; Provisional
Probab=99.81 E-value=2.9e-18 Score=165.52 Aligned_cols=213 Identities=14% Similarity=0.016 Sum_probs=157.2
Q ss_pred cccccccCCCC-hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 58 LNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 58 ~~l~~~~~~~~-~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
++|+.+.+..+ ++.+.+.+.+.+......|....+..++++.+.+++.+.+|.+.+. ...+++|+|+++++..++.+
T Consensus 29 i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~--~~~i~~t~G~~~al~~~~~~ 106 (387)
T PRK08912 29 INLGQGFPDDPGPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDP--ETEVMVTSGATEALAAALLA 106 (387)
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC--cccEEEeCCcHHHHHHHHHH
Confidence 45555544433 3556666655554333445555678899999999999888875422 11589999999999888877
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCccc
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG 216 (356)
..++ +++|+++.++|..+...++..|++++.+|++++++.+|+++|++.+.+++++|++++|+||||
T Consensus 107 ~~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG 173 (387)
T PRK08912 107 LVEP-------------GDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFSPRTKAVLLNNPLNPAG 173 (387)
T ss_pred hcCC-------------CCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhCccceEEEEeCCCCCcC
Confidence 6432 578999999999999999999999999999754589999999999988899999999999999
Q ss_pred ccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCc-cccc-CCCceEEEEcCCcCCC-CCcCeeEEEE
Q 018437 217 EFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFR-LPLVKSINVSGHKYGL-VYAGVGWVVW 290 (356)
Q Consensus 217 ~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~-~~~~Ds~~~~~hK~l~-~P~g~g~l~~ 290 (356)
.+.+ +++|.++|+++ ++++++|++|+.+...- .+... ..+. ....+.+..+..|.++ ....+|+++.
T Consensus 174 ~~~s~~~~~~i~~~~~~~------~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~ 246 (387)
T PRK08912 174 KVFPREELALLAEFCQRH------DAVAICDEVWEHVVFDG-RRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCA 246 (387)
T ss_pred cccCHHHHHHHHHHHHHC------CeEEEEhhhhhhcccCC-CCCcChhhCCCccCceEEEeechhhccCcCceeEEEec
Confidence 9865 67799999999 99999999998654310 00001 1111 1234577788999875 3355899987
Q ss_pred eC
Q 018437 291 RT 292 (356)
Q Consensus 291 ~~ 292 (356)
..
T Consensus 247 ~~ 248 (387)
T PRK08912 247 AP 248 (387)
T ss_pred CH
Confidence 43
No 80
>PRK08363 alanine aminotransferase; Validated
Probab=99.81 E-value=2.9e-18 Score=166.13 Aligned_cols=213 Identities=14% Similarity=0.025 Sum_probs=159.8
Q ss_pred cCCCCcccccccCC----CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhH
Q 018437 53 DGNPRLNLASFVTT----WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (356)
Q Consensus 53 ~~~~~~~l~~~~~~----~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~ 128 (356)
.+.+.++|+.+.|. ++++.+.+++.+.+......|...++..++++.+.+++.+.+|...+. ..+++|+|+++
T Consensus 28 ~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~---~~i~it~G~~~ 104 (398)
T PRK08363 28 KGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITP---DDVRVTAAVTE 104 (398)
T ss_pred cCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCh---hhEEEeCCHHH
Confidence 44455677777763 345678888877765433345456678889999888888877754322 35899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEE-EecCCccccCHHHHHHHHhhCceEEE
Q 018437 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEV-KLEEGYYVMNPVKAVELVDENTICVA 207 (356)
Q Consensus 129 a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v-~~~~~~~~~d~~~L~~~i~~~~~~v~ 207 (356)
++.+++.++.++ ++.|+++.++|..+...++..|+.++.+ +++++++.+|++.|++++.+++++|+
T Consensus 105 al~~~~~~~~~~-------------gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~ 171 (398)
T PRK08363 105 ALQLIFGALLDP-------------GDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIA 171 (398)
T ss_pred HHHHHHHHhCCC-------------CCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcceEEEE
Confidence 999998877542 5789999999999999999999998888 55555578999999999988899999
Q ss_pred EecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCCc-eEE-EEcCCcC-CC
Q 018437 208 AILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLV-KSI-NVSGHKY-GL 280 (356)
Q Consensus 208 ~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~-Ds~-~~~~hK~-l~ 280 (356)
+++|+||||.+-+ +++|.++|+++ ++++++|++|+.+... +.. ..+. .... ..+ ..|+.|+ +.
T Consensus 172 l~~p~NPtG~~~~~~~~~~l~~~a~~~------~~~li~Deay~~~~~~---~~~-~~~~~~~~~~~vi~~~SfSK~~~~ 241 (398)
T PRK08363 172 VINPNNPTGALYEKKTLKEILDIAGEH------DLPVISDEIYDLMTYE---GKH-VSPGSLTKDVPVIVMNGLSKVYFA 241 (398)
T ss_pred EECCCCCCCcCcCHHHHHHHHHHHHHc------CeEEEEhhhhhhhccC---Ccc-cCHHHcCcCCcEEEEecchhccCC
Confidence 9999999999866 88999999999 9999999999875331 111 1111 1111 233 4579998 56
Q ss_pred CCcCeeEEEEe
Q 018437 281 VYAGVGWVVWR 291 (356)
Q Consensus 281 ~P~g~g~l~~~ 291 (356)
...++|++++.
T Consensus 242 ~GlRiG~~~~~ 252 (398)
T PRK08363 242 TGWRLGYIYFV 252 (398)
T ss_pred ccceEEEEEEe
Confidence 67889999873
No 81
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.81 E-value=3.8e-18 Score=170.53 Aligned_cols=213 Identities=11% Similarity=0.033 Sum_probs=158.7
Q ss_pred cCCCCcccccccCC---C-ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhH
Q 018437 53 DGNPRLNLASFVTT---W-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (356)
Q Consensus 53 ~~~~~~~l~~~~~~---~-~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~ 128 (356)
.++..++|..+.+. + +++.+.+++.+.+.. ...|....+...+++++.+++.+..+.+.+ ...+++|+|+++
T Consensus 144 ~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~-~~~Y~~~~G~~~lReaia~~~~~~~~~~~~---~~~I~it~G~~e 219 (517)
T PRK13355 144 AGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTD-TEGYSDSKGLFSARKAIMQYAQLKGLPNVD---VDDIYTGNGVSE 219 (517)
T ss_pred cCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhc-CCCCCCCcChHHHHHHHHHHHHhcCCCCCC---hhHEEEeCcHHH
Confidence 44555566665663 2 246777777766653 334656668888998888888665443221 135899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCC-ccccCHHHHHHHHhhCceEEE
Q 018437 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDENTICVA 207 (356)
Q Consensus 129 a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~~~~~v~ 207 (356)
++.+++.++.++ +++|+++.|+|+.|...++..|++++.++++++ +|.+|+++|++++++++++|+
T Consensus 220 al~~~~~~l~~~-------------Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i~ 286 (517)
T PRK13355 220 LINLSMSALLDD-------------GDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSRTKAIV 286 (517)
T ss_pred HHHHHHHHhCCC-------------CCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCcCceEEE
Confidence 999998887543 579999999999999999999999999998753 589999999999998999999
Q ss_pred EecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc--CCCceEEEE-cCCcC-CC
Q 018437 208 AILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPLVKSINV-SGHKY-GL 280 (356)
Q Consensus 208 ~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~Ds~~~-~~hK~-l~ 280 (356)
+++|+||||.+.+ +++|.++|++| ++++++|++|..+..+ ......+. .+....+++ ++.|. +.
T Consensus 287 i~nP~NPTG~v~~~~~l~~i~~~a~~~------~~~ii~DE~Y~~~~~~---~~~~~s~~~~~~~~~vi~~~S~SK~~~~ 357 (517)
T PRK13355 287 IINPNNPTGALYPREVLQQIVDIAREH------QLIIFSDEIYDRLVMD---GLEHTSIASLAPDLFCVTFSGLSKSHMI 357 (517)
T ss_pred EECCCCCCCcCcCHHHHHHHHHHHHHc------CcEEEEehhhhhhcCC---CCCcccHHHhCCCCeEEEEecchhhccC
Confidence 9999999999966 88899999999 9999999999875541 11111111 122234443 46897 46
Q ss_pred CCcCeeEEEEe
Q 018437 281 VYAGVGWVVWR 291 (356)
Q Consensus 281 ~P~g~g~l~~~ 291 (356)
+.+.+|++++.
T Consensus 358 ~G~RiG~~i~~ 368 (517)
T PRK13355 358 AGYRIGWMILS 368 (517)
T ss_pred cccceEEEEee
Confidence 67889999864
No 82
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.80 E-value=9.2e-19 Score=148.17 Aligned_cols=165 Identities=18% Similarity=0.048 Sum_probs=130.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHH-HHHHhhCC
Q 018437 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE-KFARYFEV 176 (356)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~-~~~~~~G~ 176 (356)
.+++++++++++.+. ..+++++|||+|+..++.+++.+ +++|+++.+.|++.. ..+...|+
T Consensus 3 ~~~~~~l~~~~~~~~-----~~~~~~~~~t~a~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~~~~~~~g~ 64 (170)
T cd01494 3 EELEEKLARLLQPGN-----DKAVFVPSGTGANEAALLALLGP-------------GDEVIVDANGHGSRYWVAAELAGA 64 (170)
T ss_pred HHHHHHHHHHcCCCC-----CcEEEeCCcHHHHHHHHHHhCCC-------------CCEEEEeecccceehhhHHHhcCC
Confidence 357788999996433 34889999999999999987542 468999999998887 88888999
Q ss_pred eeEEEEecCCc-cccCHHHHHHHH-hhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccc
Q 018437 177 ELKEVKLEEGY-YVMNPVKAVELV-DENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (356)
Q Consensus 177 ~v~~v~~~~~~-~~~d~~~L~~~i-~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (356)
+++.++.+.+. ...|.+.+++.. .+++++++++++++++|...|+++|.++|+++ ++++|+|++++++..+.
T Consensus 65 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~------~~~li~D~a~~~~~~~~ 138 (170)
T cd01494 65 KPVPVPVDDAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEY------GILLLVDAASAGGASPA 138 (170)
T ss_pred EEEEeccCCCCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHc------CCEEEEecccccccccc
Confidence 99999987532 223333555443 45789999999999999999999999999999 99999999999876632
Q ss_pred cCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 255 ~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
.. .+....++|.++.|+||++++ .|+|++++|
T Consensus 139 ~~----~~~~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 139 PG----VLIPEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred cc----cccccccCCEEEEEcccccCC-CceEEEEeC
Confidence 11 223345799999999999977 899999875
No 83
>PLN02721 threonine aldolase
Probab=99.80 E-value=8.8e-19 Score=166.68 Aligned_cols=199 Identities=13% Similarity=0.053 Sum_probs=137.0
Q ss_pred ccccCCCChHHHHHHHHHH-hcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHH
Q 018437 61 ASFVTTWMEPECDKLVMAS-INKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (356)
Q Consensus 61 ~~~~~~~~~~~v~~~i~~~-~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~ 139 (356)
.+..++.+.+.+.+++... .+.. .+...+... ++++.+++++|.+. ++++++|++++..++.+...
T Consensus 11 ~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~~~~~----~l~~~la~~~~~~~-------~~~~~~Gs~a~~~~l~~~~~ 77 (353)
T PLN02721 11 RSDTVTKPTDAMRAAMANAEVDDD--VLGYDPTAL----RLEEEMAKIFGKEA-------ALFVPSGTMGNLISVLVHCD 77 (353)
T ss_pred hcccccCCCHHHHHHHHhccCCCc--ccCCCHHHH----HHHHHHHHHhCCce-------eEEecCccHHHHHHHHHHcc
Confidence 3333445567788877653 2211 122233344 44555888888864 67888889998877776543
Q ss_pred HHHHHHHhcCCCCCCCeEEecCCCcchHHH---HHHhhCCeeEEEEecCCccccCHHHHHHHHh-------hCceEEEEe
Q 018437 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEK---FARYFEVELKEVKLEEGYYVMNPVKAVELVD-------ENTICVAAI 209 (356)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~---~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~-------~~~~~v~~~ 209 (356)
. .+++|++++++|+++.+ .+...|++++.+|.+++ +.+|+++|+++++ +++++|+++
T Consensus 78 ~------------~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~ 144 (353)
T PLN02721 78 V------------RGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNNED-GTMDLDAIEAAIRPKGDDHFPTTRLICLE 144 (353)
T ss_pred C------------CCCeEEEcCccceehhcccchhhhcCceeEecCCCcC-CCcCHHHHHHHHHhccCCCCCcceEEEEe
Confidence 1 15789999999987665 56788999999998764 8999999999998 578888886
Q ss_pred c-CCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCe
Q 018437 210 L-GSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV 285 (356)
Q Consensus 210 ~-~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~ 285 (356)
. ++||+|.+.| +++|.++|+++ |+++|+|++|..+... ..+ ...+-...++|++++++||++++|.|
T Consensus 145 ~~~~np~G~~~~~~~l~~l~~l~~~~------g~~livD~a~~~~~~~-~~~-~~~~~~~~~~d~~~~s~sK~l~~~~G- 215 (353)
T PLN02721 145 NTHANCGGRCLSVEYTDKVGELAKRH------GLKLHIDGARIFNASV-ALG-VPVHRLVKAADSVSVCLSKGLGAPVG- 215 (353)
T ss_pred ccccccCCccccHHHHHHHHHHHHHc------CCEEEEEchhhhcchh-hhC-CCHHHHhhhCCEEEEecccccCCcee-
Confidence 6 4677888754 78999999999 9999999987532210 011 11111134789999999999987654
Q ss_pred eEEEEeCCCC
Q 018437 286 GWVVWRTKDD 295 (356)
Q Consensus 286 g~l~~~~~~~ 295 (356)
.+++.+++.
T Consensus 216 -~~~~~~~~~ 224 (353)
T PLN02721 216 -SVIVGSKSF 224 (353)
T ss_pred -eEEecCHHH
Confidence 333444433
No 84
>PRK09082 methionine aminotransferase; Validated
Probab=99.80 E-value=2.2e-18 Score=166.29 Aligned_cols=210 Identities=14% Similarity=0.049 Sum_probs=160.1
Q ss_pred cccccccCCCC-hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 58 LNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 58 ~~l~~~~~~~~-~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
++|+.+.+..+ ++.+.+++.+.+......|....+...+++++.+++.+++|.+.+. ...+++|+|+++++..++.+
T Consensus 33 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~--~~~i~~t~G~~~al~~~~~~ 110 (386)
T PRK09082 33 INLSQGFPDFDGPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDA--DSEITVTAGATEALFAAILA 110 (386)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC--CCcEEEeCCHHHHHHHHHHH
Confidence 45555544433 4677788777665443445556688999999999999999986421 12488999999999998887
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCccc
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG 216 (356)
+.++ +++|+++.++|..+...++..|++++.+|++++++.+|++++++++++++++|++++|+||||
T Consensus 111 ~~~~-------------gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG 177 (386)
T PRK09082 111 LVRP-------------GDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAISPRTRLIILNTPHNPSG 177 (386)
T ss_pred HcCC-------------CCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcCccceEEEEeCCCCCCC
Confidence 7542 578999999999999999999999999999754589999999999988899999999999999
Q ss_pred cc---CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc----CCCceEEEEcCCcCCC-CCcCeeEE
Q 018437 217 EF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR----LPLVKSINVSGHKYGL-VYAGVGWV 288 (356)
Q Consensus 217 ~~---~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~----~~~~Ds~~~~~hK~l~-~P~g~g~l 288 (356)
.+ +++++|.++|+++ ++++++|.+|+.+..+ ......+. ...-..+..++.|.++ ....+|++
T Consensus 178 ~~~~~~~~~~i~~~a~~~------~i~li~De~y~~~~~~---~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~i 248 (386)
T PRK09082 178 TVWSAADMRALWQLIAGT------DIYVLSDEVYEHIVFD---GAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYC 248 (386)
T ss_pred cCCCHHHHHHHHHHHHHC------CEEEEEehhhhhhccC---CCCCCChhhCcCccCcEEEEeechhhccchhhhhhhh
Confidence 87 6789999999999 9999999999875442 11111111 1123455567899874 44568898
Q ss_pred EEe
Q 018437 289 VWR 291 (356)
Q Consensus 289 ~~~ 291 (356)
+..
T Consensus 249 v~~ 251 (386)
T PRK09082 249 VAP 251 (386)
T ss_pred hCC
Confidence 864
No 85
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.80 E-value=7.5e-18 Score=163.53 Aligned_cols=212 Identities=13% Similarity=0.065 Sum_probs=156.8
Q ss_pred cccccccCC--CChHHHHHHHHHHhccc-CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHH
Q 018437 58 LNLASFVTT--WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (356)
Q Consensus 58 ~~l~~~~~~--~~~~~v~~~i~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (356)
++|..+.+. ++++.+.+.+.+.++.. ...|....+...+++++.+++++.+|.+.+. ...+++|+|+++++..++
T Consensus 42 i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~--~~~I~it~Ga~~al~~~~ 119 (405)
T PRK06207 42 VDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDA--ADELIITPGTQGALFLAV 119 (405)
T ss_pred eecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCCEEEeCCcHHHHHHHH
Confidence 455544444 24467777777766542 2345556688899999999999999975311 035899999999999988
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC----CccccCHHHHHHHHhhCceEEEEec
Q 018437 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE----GYYVMNPVKAVELVDENTICVAAIL 210 (356)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~----~~~~~d~~~L~~~i~~~~~~v~~~~ 210 (356)
.++.++ +++|+++.|+|+.+...++..|++++.|+++. +++.+|+++|++++++++++|++++
T Consensus 120 ~~l~~~-------------Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~ 186 (405)
T PRK06207 120 AATVAR-------------GDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSN 186 (405)
T ss_pred HHhcCC-------------CCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECC
Confidence 877543 57999999999999999999999999999862 2488999999999988899999999
Q ss_pred CCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcc-cccC-CCceEEEEcCCcCCC-CCcC
Q 018437 211 GSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRL-PLVKSINVSGHKYGL-VYAG 284 (356)
Q Consensus 211 ~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~-~~~Ds~~~~~hK~l~-~P~g 284 (356)
|+||||.+.+ +++|.++|+++ ++++++|++|+.+...- .+.... .+.. ..--.+..|+.|.++ ....
T Consensus 187 P~NPTG~~~s~e~l~~l~~~a~~~------~~~iI~De~Y~~~~~~~-~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlR 259 (405)
T PRK06207 187 PNNPAGVVYSAEEIAQIAALARRY------GATVIVDQLYSRLLYDG-TSYTHLRALPIDPENVITIMGPSKTESLSGYR 259 (405)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccccccCC-CCCCchhcCCCCcCcEEEEecchhhccCcccc
Confidence 9999999966 77788999999 99999999998754310 000000 1111 111245556899875 4456
Q ss_pred eeEEEEe
Q 018437 285 VGWVVWR 291 (356)
Q Consensus 285 ~g~l~~~ 291 (356)
+|+++..
T Consensus 260 iG~ii~~ 266 (405)
T PRK06207 260 LGVAFGS 266 (405)
T ss_pred eEEEEcC
Confidence 9998753
No 86
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.80 E-value=7.4e-18 Score=162.77 Aligned_cols=212 Identities=14% Similarity=0.043 Sum_probs=156.6
Q ss_pred cccccccCCC-ChHHHHHHHHHHhcc-cCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHH
Q 018437 58 LNLASFVTTW-MEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (356)
Q Consensus 58 ~~l~~~~~~~-~~~~v~~~i~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (356)
+.|+.+.+.. +++.+.+++.+++.. ....|....+...+++++++++++.+|.+.+. ...+++|+|+++++..++.
T Consensus 30 ~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~--~~~i~~t~G~~~~l~~~~~ 107 (389)
T PRK05957 30 ISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNN--EQAIVVTAGSNMAFMNAIL 107 (389)
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCeEEEeCChHHHHHHHHH
Confidence 4566655553 456788888777643 22345556688899999999999999985320 1347899999999988887
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcc
Q 018437 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (356)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (356)
++..+ +++|+++.|+|..+...++..|++++.+|+++ ++.+|+++|++++++++++|++++|+|||
T Consensus 108 ~~~~~-------------gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~klv~~~~p~NPt 173 (389)
T PRK05957 108 AITDP-------------GDEIILNTPYYFNHEMAITMAGCQPILVPTDD-NYQLQPEAIEQAITPKTRAIVTISPNNPT 173 (389)
T ss_pred HhcCC-------------CCEEEEeCCCCcCHHHHHHhcCCEEEEeecCC-CCCcCHHHHHHhcCcCceEEEEeCCCCCC
Confidence 76432 57899999999888888888999999999975 48999999999998889999999999999
Q ss_pred cccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCc-ccc-cCCCceEEEEcCCcCCC-CCcCeeEEE
Q 018437 216 GEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDF-RLPLVKSINVSGHKYGL-VYAGVGWVV 289 (356)
Q Consensus 216 G~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~-~~~~~Ds~~~~~hK~l~-~P~g~g~l~ 289 (356)
|.+.+ +++|.++|+++ |+++++|++|+.+...- .+... ..+ ....-..+..+..|.++ ....+|+++
T Consensus 174 G~~~~~~~~~~i~~~a~~~------~~~li~De~y~~~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~ 246 (389)
T PRK05957 174 GVVYPEALLRAVNQICAEH------GIYHISDEAYEYFTYDG-VKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMV 246 (389)
T ss_pred CcCcCHHHHHHHHHHHHHc------CcEEEEeccchhccCCC-CCccChhhCCCccCcEEEEecchhhccCccceeEEEe
Confidence 99977 88899999999 99999999998754310 01111 111 11111233455779763 333599998
Q ss_pred EeC
Q 018437 290 WRT 292 (356)
Q Consensus 290 ~~~ 292 (356)
+.+
T Consensus 247 ~~~ 249 (389)
T PRK05957 247 IPI 249 (389)
T ss_pred cCH
Confidence 743
No 87
>PRK07337 aminotransferase; Validated
Probab=99.80 E-value=8e-18 Score=162.48 Aligned_cols=209 Identities=16% Similarity=0.072 Sum_probs=157.0
Q ss_pred cccccccCCC-ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 58 LNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 58 ~~l~~~~~~~-~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
++|..+.+.. +++.+.+++.+++......|....+...+++.+.+++.+.+|.+.+. ..+++|+|+++++.+++.+
T Consensus 33 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~---~~i~~t~G~~~al~~~~~~ 109 (388)
T PRK07337 33 IHMGIGEPDFTAPEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAP---ERIVVTAGASAALLLACLA 109 (388)
T ss_pred EEeCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCh---HhEEEecCcHHHHHHHHHH
Confidence 4455555543 34677888877775444455555678899999999998888875422 3488999999999888887
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEEecCCCcc
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLT 215 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (356)
+.++ +++|+++.++|..+...++..|++++.+|+++ +++.+|+++|++.+.+++++|++++|+|||
T Consensus 110 l~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPt 176 (388)
T PRK07337 110 LVER-------------GDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSNPT 176 (388)
T ss_pred hcCC-------------CCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCccceEEEEECCCCCC
Confidence 6542 57999999999999999999999999999975 358999999999999889999999999999
Q ss_pred cccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEE-EcCCcCCC-CCcCeeEEEE
Q 018437 216 GEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSIN-VSGHKYGL-VYAGVGWVVW 290 (356)
Q Consensus 216 G~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~-~~~hK~l~-~P~g~g~l~~ 290 (356)
|.+.+ +++|.++|+++ ++++++|.+|..+.. .+. .........+.++ .|.+|.++ ....+|+++.
T Consensus 177 G~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~---~~~-~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~ 246 (388)
T PRK07337 177 GTSIAPDELRRIVEAVRAR------GGFTIVDEIYQGLSY---DAA-PVSALSLGDDVITINSFSKYFNMTGWRLGWLVV 246 (388)
T ss_pred CcCcCHHHHHHHHHHHHHC------CCEEEEecccccccc---CCC-CcChhhccCCEEEEEechhhcCCchhheeeeec
Confidence 99854 68888999999 999999999986433 111 1111111234444 47899874 4456899987
Q ss_pred eC
Q 018437 291 RT 292 (356)
Q Consensus 291 ~~ 292 (356)
.+
T Consensus 247 ~~ 248 (388)
T PRK07337 247 PE 248 (388)
T ss_pred CH
Confidence 53
No 88
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.79 E-value=7e-18 Score=160.64 Aligned_cols=199 Identities=17% Similarity=0.072 Sum_probs=149.5
Q ss_pred hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhc
Q 018437 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (356)
++.+.+++.+... ....|....+...+++++.+++.+.+|++.+. ...+++|+|+++++..++.++.++
T Consensus 15 ~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~--~~~Iiit~Gs~~ai~~~~~~~~~~-------- 83 (350)
T TIGR03537 15 PPFIRKALIDAVP-EVSQYPSALGTKALREAISGWFERRFGVKLDP--DAQVLPSAGSKEAIFHFPLVFIDP-------- 83 (350)
T ss_pred CHHHHHHHHHHHh-ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCcEEEcCChHHHHHHHHHHHcCC--------
Confidence 5677888776654 33445555677899999999999888876421 115899999999999888877542
Q ss_pred CCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec-CCccccCHHHHHHHHhhCceEEEEecCCCcccccCC---HHHH
Q 018437 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLL 224 (356)
Q Consensus 149 g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---i~~I 224 (356)
| ..+++|+++.|+|..+...++..|++++.++++ ++++.+|++++++++.++++++++++|+||||.+.+ +++|
T Consensus 84 g--~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l 161 (350)
T TIGR03537 84 E--EDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPRSYLKET 161 (350)
T ss_pred C--CCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCHHHHHHH
Confidence 1 113689999999999999999999999999997 345789999999999889999999999999999877 8889
Q ss_pred HHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-C-CCceEEEEcCCcCCC-CCcCeeEEEE
Q 018437 225 HDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-L-PLVKSINVSGHKYGL-VYAGVGWVVW 290 (356)
Q Consensus 225 ~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~-~~~Ds~~~~~hK~l~-~P~g~g~l~~ 290 (356)
.++|+++ ++++++|++|+.+... .....+. . ..-..+..+.+|.++ .....|+++.
T Consensus 162 ~~~a~~~------~~~ii~De~y~~~~~~----~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~ 220 (350)
T TIGR03537 162 IAMCREH------GIILCSDECYTEIYFG----EPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAG 220 (350)
T ss_pred HHHHHHc------CcEEEEeccccccccC----CCCCchhhcCcCCEEEEeecccccCCccccceeeec
Confidence 9999999 9999999999864331 1111111 1 111244457899863 3456888864
No 89
>PRK07324 transaminase; Validated
Probab=99.79 E-value=3.4e-18 Score=164.22 Aligned_cols=205 Identities=13% Similarity=0.027 Sum_probs=149.0
Q ss_pred CCCCcccccccCCCCh-HHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHH
Q 018437 54 GNPRLNLASFVTTWME-PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (356)
Q Consensus 54 ~~~~~~l~~~~~~~~~-~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~ 132 (356)
++...++..+.+..+. +.+ +++..++......|....+...+++++.+++. ++++ ..+++|+|+++++.+
T Consensus 25 ~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~---~~~~-----~~vi~t~G~~~al~~ 95 (373)
T PRK07324 25 ESCIDSLTLEELLALAGKNP-EAFYQELGQKKLTYGWIEGSPEFKEAVASLYQ---NVKP-----ENILQTNGATGANFL 95 (373)
T ss_pred cCCCCCCcHHHHHhccCcch-HHHHHHHhcCCccCCCCCCCHHHHHHHHHHhc---CCCh-----hhEEEcCChHHHHHH
Confidence 3444444444444332 345 66666666555566666677777776544432 3444 348899999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEEecC
Q 018437 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILG 211 (356)
Q Consensus 133 al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~ 211 (356)
++.++.++ +++|+++.|+|..+...++..|++++.+|+++ +++.+|+++|++++.+++++|++++|
T Consensus 96 ~~~~l~~~-------------gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p 162 (373)
T PRK07324 96 VLYALVEP-------------GDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNA 162 (373)
T ss_pred HHHHhCCC-------------CCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCC
Confidence 99887543 57899999999999999999999999999975 34789999999999889999999999
Q ss_pred CCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCC-CCcCee
Q 018437 212 STLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGL-VYAGVG 286 (356)
Q Consensus 212 ~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~-~P~g~g 286 (356)
+||||.+-+ +++|+++|+++ ++++++|++|..+... .. ...+. ...-.....+..|.++ ....+|
T Consensus 163 ~NPtG~~~~~~~l~~i~~~a~~~------~~~ii~De~y~~l~~~---~~-~~s~~~~~~~~I~~~s~SK~~~~~G~RiG 232 (373)
T PRK07324 163 NNPTGALMDRAYLEEIVEIARSV------DAYVLSDEVYRPLDED---GS-TPSIADLYEKGISTNSMSKTYSLPGIRVG 232 (373)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHC------CCEEEEEccccccccC---CC-CCChhhccCCEEEEecchhhcCCccceeE
Confidence 999999977 88999999999 9999999999875431 11 11111 1111233446889765 456789
Q ss_pred EEEE
Q 018437 287 WVVW 290 (356)
Q Consensus 287 ~l~~ 290 (356)
+++.
T Consensus 233 ~i~~ 236 (373)
T PRK07324 233 WIAA 236 (373)
T ss_pred EEec
Confidence 9987
No 90
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.79 E-value=4e-18 Score=161.86 Aligned_cols=189 Identities=15% Similarity=0.002 Sum_probs=138.4
Q ss_pred hHHHHHHHHHHhcccCCCcc---cCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHH
Q 018437 69 EPECDKLVMASINKNYVDMD---EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~---~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (356)
+|.+.+++.+++......+. ...+.....+++++.+++++|.+. .+++++|++++..++.++..+
T Consensus 17 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-------~iv~~sg~~a~~~~~~~~~~~----- 84 (349)
T cd06454 17 HPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKEA-------ALVFSSGYAANDGVLSTLAGK----- 84 (349)
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCCC-------EEEeccHHHHHHHHHHHhcCC-----
Confidence 47888888888764222111 122455666788888999999863 567777889998887766532
Q ss_pred HhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh-----CceEEEEecCCCcccccCC
Q 018437 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-----NTICVAAILGSTLTGEFED 220 (356)
Q Consensus 146 ~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-----~~~~v~~~~~~~~tG~~~~ 220 (356)
+++|+++.++|+++...++..|++++.++. +|++.+++++++ ++++|++++++|++|.+.|
T Consensus 85 --------gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~ 150 (349)
T cd06454 85 --------GDLIISDSLNHASIIDGIRLSGAKKRIFKH------NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP 150 (349)
T ss_pred --------CCEEEEehhhhHHHHHHHHHcCCceEEecC------CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC
Confidence 578999999999999888989999877752 467788888864 4678888999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCcEEEecccccccccccCC-CCcccccCCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP-DLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 221 i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~-~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
+++|.++|+++ ++++|+|++|+.+..+.... ....+....+.|.++.++||+++. .| |+++.+
T Consensus 151 ~~~i~~~~~~~------~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~g-G~i~~~ 214 (349)
T cd06454 151 LPELVDLAKKY------GAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA-VG-GYIAGS 214 (349)
T ss_pred HHHHHHHHHHc------CCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcc-cC-CEEECC
Confidence 99999999999 99999999997543321100 001122234789999999998854 44 666543
No 91
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.79 E-value=1.4e-17 Score=152.19 Aligned_cols=214 Identities=17% Similarity=0.140 Sum_probs=162.2
Q ss_pred CCcccccccCCC-----ChHHHHHHHHHHhcccCC-CcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHH
Q 018437 56 PRLNLASFVTTW-----MEPECDKLVMASINKNYV-DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEA 129 (356)
Q Consensus 56 ~~~~l~~~~~~~-----~~~~v~~~i~~~~~~~~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a 129 (356)
|.+.++.+-|+. ..+.+.+++.+++..+-+ .|..+.|....++++.+++.+-+...- ....+++|+|.++|
T Consensus 62 ~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl---~a~DV~ltsGC~qA 138 (447)
T KOG0259|consen 62 PILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKL---TADDVVLTSGCSQA 138 (447)
T ss_pred eeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCcc---CcCceEEeccchHH
Confidence 334455544442 236788888888876544 467777888888887776555433332 22458999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe-cCCccccCHHHHHHHHhhCceEEEE
Q 018437 130 IMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL-EEGYYVMNPVKAVELVDENTICVAA 208 (356)
Q Consensus 130 ~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~~L~~~i~~~~~~v~~ 208 (356)
+.+++.++.++ +.+|++|.|+++-|...+...|++|++.++ .+++|++|++.+|..++++|.++++
T Consensus 139 Ie~~i~~LA~p-------------~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~Aivv 205 (447)
T KOG0259|consen 139 IELAISSLANP-------------GANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVV 205 (447)
T ss_pred HHHHHHHhcCC-------------CCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhccCeeEEEE
Confidence 99999988654 568999999999999999999999999998 3456999999999999999999999
Q ss_pred ecCCCccccc---CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc--CCCceEEEEc-CCc-CCCC
Q 018437 209 ILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPLVKSINVS-GHK-YGLV 281 (356)
Q Consensus 209 ~~~~~~tG~~---~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~Ds~~~~-~hK-~l~~ 281 (356)
+.|+||+|.+ +-+++|+++|+++ ++.++.|++|+..+++ +.+-..+. -.-+-.++.+ ..| |+--
T Consensus 206 iNP~NPcGnVys~~HL~kiae~A~kl------gi~vIaDEVY~~~vfg---~~pfvpmg~fssiVPVitlggisKrW~VP 276 (447)
T KOG0259|consen 206 INPNNPCGNVYSEDHLKKIAETAKKL------GIMVIADEVYGHTVFG---DKPFVPMGKFSSIVPVITLGGISKRWIVP 276 (447)
T ss_pred eCCCCCCcccccHHHHHHHHHHHHHh------CCeEEehhhcceeecC---CCCccchhhccccCceEeecccccccccC
Confidence 9999999998 5699999999999 9999999999987653 21111111 1224445544 345 6655
Q ss_pred CcCeeEEEEeCCC
Q 018437 282 YAGVGWVVWRTKD 294 (356)
Q Consensus 282 P~g~g~l~~~~~~ 294 (356)
.|..|+++..|..
T Consensus 277 GWRlGWi~~hD~~ 289 (447)
T KOG0259|consen 277 GWRLGWIALHDPR 289 (447)
T ss_pred CceeeeEEEeccc
Confidence 6899999998753
No 92
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.79 E-value=2.5e-17 Score=159.87 Aligned_cols=214 Identities=15% Similarity=0.132 Sum_probs=155.3
Q ss_pred CCCCcccccccCC-----CChHHHHHHHHHHhcccC-CCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChh
Q 018437 54 GNPRLNLASFVTT-----WMEPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (356)
Q Consensus 54 ~~~~~~l~~~~~~-----~~~~~v~~~i~~~~~~~~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt 127 (356)
+...++|+.+.|. ++++.+.+++.+.+.... ..|....+...+++.+.+++....|.+.+ ...+++|+|++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~---~~~ii~t~G~t 106 (403)
T TIGR01265 30 EKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLT---ADDVVLTSGCS 106 (403)
T ss_pred CCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCC---HHHEEEecChH
Confidence 4444567666663 345688888887775432 23444556667777766666654444321 13488999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEE
Q 018437 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICV 206 (356)
Q Consensus 128 ~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v 206 (356)
+|+.+++.++..+ +++|+++.++|..+...++..|++++.++++. +++.+|++++++++.++++++
T Consensus 107 ~al~~~~~~l~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v 173 (403)
T TIGR01265 107 QAIEICIEALANP-------------GANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADEKTVAI 173 (403)
T ss_pred HHHHHHHHHhCCC-------------CCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCcCccEE
Confidence 9999999887532 57899999999999999999999999998854 347899999999998889999
Q ss_pred EEecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-C-CCceE-EEEcCCcC-C
Q 018437 207 AAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-L-PLVKS-INVSGHKY-G 279 (356)
Q Consensus 207 ~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~-~~~Ds-~~~~~hK~-l 279 (356)
++++|+||||.+.+ +++|.++|+++ ++++++|++|+.+... ......+. + ..... +..|..|. +
T Consensus 174 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~~---~~~~~~~~~~~~~~~vi~~~S~SK~~~ 244 (403)
T TIGR01265 174 VVINPSNPCGSVFSRDHLQKIAEVARKL------GIPIIADEIYGHMVFG---DAPFIPMASFASIVPVLSLGGISKRWV 244 (403)
T ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHHC------CCEEEEEccccccccC---CCCccchhhhccCCcEEEEeecccccC
Confidence 99999999999954 88999999999 9999999999876531 11111111 1 11123 33468997 5
Q ss_pred CCCcCeeEEEEeC
Q 018437 280 LVYAGVGWVVWRT 292 (356)
Q Consensus 280 ~~P~g~g~l~~~~ 292 (356)
.....+|+++..+
T Consensus 245 ~pGlRiG~~v~~~ 257 (403)
T TIGR01265 245 VPGWRLGWIIIHD 257 (403)
T ss_pred CCcceEEEEEEeC
Confidence 5557899998754
No 93
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.79 E-value=2.7e-17 Score=159.39 Aligned_cols=211 Identities=10% Similarity=0.026 Sum_probs=155.8
Q ss_pred CCcccccccCCC-ChHHHHHHHHHHhccc-CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHH
Q 018437 56 PRLNLASFVTTW-MEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (356)
Q Consensus 56 ~~~~l~~~~~~~-~~~~v~~~i~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~a 133 (356)
..++|..+.+.. +++.+.+++.+.++.. .+.|. ..+...+++.+.+++.+.+|++.+. ...+++|+|+++++.++
T Consensus 33 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~--~~~I~it~G~~~al~~~ 109 (399)
T PRK07681 33 KMIDLSIGNPDMPPADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILNA--DKEVLLLMGSQDGLVHL 109 (399)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCC--CCeEEECCCcHHHHHHH
Confidence 334555555442 3467788887766532 22222 3578889999999999888876421 13588999999999998
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCC-ccccCHHHHHHHHhhCceEEEEecCC
Q 018437 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDENTICVAAILGS 212 (356)
Q Consensus 134 l~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~~~~~v~~~~~~ 212 (356)
+.++.++ ++.|+++.|+|+.+...++..|++++.+|++++ .+.+|++++++++.+++++|++++|+
T Consensus 110 ~~~~~~~-------------Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~ 176 (399)
T PRK07681 110 PMVYANP-------------GDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADKAKMMILNFPG 176 (399)
T ss_pred HHHhCCC-------------CCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCC
Confidence 8877543 579999999999999999999999999999753 47899999999998889999999999
Q ss_pred CcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CC---CceEEEEcCCcCCC-CCcC
Q 018437 213 TLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LP---LVKSINVSGHKYGL-VYAG 284 (356)
Q Consensus 213 ~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~---~~Ds~~~~~hK~l~-~P~g 284 (356)
||||.+.+ +++|.++|+++ ++++++|++|+.+... +.....+. .. .-..+.-|+.|.++ ....
T Consensus 177 NPTG~~~s~~~~~~i~~~a~~~------~~~iI~De~y~~~~~~---~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR 247 (399)
T PRK07681 177 NPVPAMAHEDFFKEVIAFAKKH------NIIVVHDFAYAEFYFD---GNKPISFLSVPGAKEVGVEINSLSKSYSLAGSR 247 (399)
T ss_pred CCcCcCCCHHHHHHHHHHHHHc------CeEEEEeccchhheeC---CCCCCChhhCCCCcccEEEEeecccccCCccce
Confidence 99999966 77888999999 9999999999876531 11111111 11 12344457899874 4466
Q ss_pred eeEEEEe
Q 018437 285 VGWVVWR 291 (356)
Q Consensus 285 ~g~l~~~ 291 (356)
+|+++..
T Consensus 248 iG~~i~~ 254 (399)
T PRK07681 248 IGYMIGN 254 (399)
T ss_pred eEEEecC
Confidence 9999753
No 94
>PLN02271 serine hydroxymethyltransferase
Probab=99.79 E-value=3.4e-17 Score=159.61 Aligned_cols=260 Identities=10% Similarity=-0.009 Sum_probs=171.2
Q ss_pred CChHHHHHHHHHHhcccC--CCc-----ccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNY--VDM-----DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~--~~~-----~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~ 139 (356)
..++.+.+++.+.+.+.. +.+ .......++|..+.+...++||++..+ ...-+-..+|+.||+.++.++.+
T Consensus 159 ~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~--~gaNVQp~SGs~AN~aV~~ALl~ 236 (586)
T PLN02271 159 FVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEK--WGVNVQPYSCTSANFAVYTGLLL 236 (586)
T ss_pred cCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccc--cccceeeccHHHHHHHHHHHhcC
Confidence 456788888876654321 111 112355689999999999999988522 10124555889999999988865
Q ss_pred HHHHHHHhcCCCCCCCeEEecCCC---cchHH------HHHHhhCCeeEEEE--ecCCccccCHHHHHH-HHhhCceEEE
Q 018437 140 KWQQKRKEQGKPYDKPNIVTGANV---QVCWE------KFARYFEVELKEVK--LEEGYYVMNPVKAVE-LVDENTICVA 207 (356)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~s~~~---h~s~~------~~~~~~G~~v~~v~--~~~~~~~~d~~~L~~-~i~~~~~~v~ 207 (356)
+ +++|+..+.. |.+.. ..+...|..+..+| +|++++.+|.++|++ ++..+|++|+
T Consensus 237 P-------------GD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII 303 (586)
T PLN02271 237 P-------------GDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILI 303 (586)
T ss_pred C-------------CCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCeEEE
Confidence 3 5788875554 44432 23345576666666 665569999999998 6677899998
Q ss_pred EecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeE
Q 018437 208 AILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGW 287 (356)
Q Consensus 208 ~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~ 287 (356)
+.+..++ ...|+++|.++|+++ |+++++|+|+..+.++- ...+ -...++|.++.++|||+.+|.| |+
T Consensus 304 ~g~Sayp--r~~D~~~i~eIAdev------GA~LmvD~AH~aGLIa~--g~~~--sP~~~aDvvt~TTHKtLrGPrG-G~ 370 (586)
T PLN02271 304 CGGSSYP--REWDYARFRQIADKC------GAVLMCDMAHISGLVAA--KECV--NPFDYCDIVTSTTHKSLRGPRG-GI 370 (586)
T ss_pred ECchhcc--CcCCHHHHHHHHHHc------CCEEEEECccccccccc--CcCC--CCCcCCcEEEeCCcccCCCCCc-eE
Confidence 8776676 667999999999999 99999999998776631 1111 1134799999999999999999 88
Q ss_pred EEEeCCCCCccccccccCCCCCC-----------CCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 288 VVWRTKDDLPDELVFHINYLGSD-----------QPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 288 l~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
++++++.. +........|.... ..-+.++|......++++..+++......++++.++.+++|+.|+
T Consensus 371 I~~r~~~~-~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA 448 (586)
T PLN02271 371 IFYRKGPK-LRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALA 448 (586)
T ss_pred EEeccccc-ccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 88865311 10000000111000 001234444434458888899998766666666666666666553
No 95
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.78 E-value=2.2e-17 Score=172.95 Aligned_cols=300 Identities=11% Similarity=0.028 Sum_probs=197.1
Q ss_pred ccccccccc-hhhhhcCC-CCCCCCCCCCHHHHHHHHHHHhhhcCCCCcccc-cccCCCChHHHHHHHHH---Hhcc-cC
Q 018437 12 EILSSTFAS-RYVRAAIP-RFKMPDNSMPKEAAYQVINDELMLDGNPRLNLA-SFVTTWMEPECDKLVMA---SINK-NY 84 (356)
Q Consensus 12 ~~~~~~~~~-~~~~~~~~-~~~lp~~~~~~~~i~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~v~~~i~~---~~~~-~~ 84 (356)
++|+++|.. .|..-.+. ...+|+ ++++.+++++++++..++......++ +|.+...|+.+.+-+.+ ++.. .+
T Consensus 32 ~s~~~l~~~~iP~~i~~~~~l~lp~-~~sE~e~~~~~~~la~~N~~~~~~ig~G~y~~~~P~vi~~~i~~~~~~~t~ytP 110 (954)
T PRK05367 32 DSLDALIDQAVPASIRLAEPLDLPA-ALSEAEALAELRAIASKNKVFRSYIGQGYYGTHTPPVILRNILENPAWYTAYTP 110 (954)
T ss_pred CCHHHHhhhhCCHHHhcCCCCCCCC-CCCHHHHHHHHHHHHhcCCCCCcccCCCCCCCcCcHHHHHHHHhCcchhhccCC
Confidence 578888887 67655444 346664 58999999999988776543221122 33333444555343332 2322 46
Q ss_pred CCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCc
Q 018437 85 VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ 164 (356)
Q Consensus 85 ~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h 164 (356)
++++.+++..+...+.+.++++++|++. ....+..++|.+...++++.+-. ..++++|++++..|
T Consensus 111 yQ~EisQG~Leal~~~Qt~la~LtG~~~-----anaSl~d~aTAa~ea~~~a~~~~----------~~~~~~vlv~~~~h 175 (954)
T PRK05367 111 YQPEISQGRLEALLNFQTMVADLTGLEI-----ANASLLDEATAAAEAMALAKRVS----------KSKSNRFFVDDDVH 175 (954)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHCCCh-----hhccccccHHHHHHHHHHhhhhc----------cCCCCEEEEcCccC
Confidence 6667788999999999999999999997 33678888888877555544321 01136899999999
Q ss_pred chHHHH----HHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCc
Q 018437 165 VCWEKF----ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTP 240 (356)
Q Consensus 165 ~s~~~~----~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~ 240 (356)
++.... ++..|++++.+|.+++ ++ ++++..+++.+| |.+|.+.|+++|+++||++ |++
T Consensus 176 P~~~~v~~t~a~~~G~ev~~~~~~~d---~~--------~~~~~~vlvq~p-~~~G~i~d~~~i~~~ah~~------Gal 237 (954)
T PRK05367 176 PQTLDVLRTRAEPLGIEVVVGDAAKA---LD--------HDDVFGVLLQYP-GTSGEVRDYTALIAAAHAR------GAL 237 (954)
T ss_pred HHHHHHHHHHHHhCCCEEEEecCccC---CC--------cccEEEEEEecC-CCCeeeccHHHHHHHHHHc------CCE
Confidence 986644 4567999999997542 11 235556655565 6679999999999999999 999
Q ss_pred EEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCc-----CeeEEEEeCCCCCcccccc-ccCCC----CCC
Q 018437 241 IHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA-----GVGWVVWRTKDDLPDELVF-HINYL----GSD 310 (356)
Q Consensus 241 l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~-----g~g~l~~~~~~~~~~~~~~-~~~~~----~~~ 310 (356)
++||+.+..... +. +....|+|.++.++|||+ +|. ++|++++|++ +. +.+.. -..|. +..
T Consensus 238 ~~vda~~~Al~~--l~-----~pge~GaDi~vgs~qkfg-~P~g~GGP~aGflavr~~-~~-r~lpgrivG~s~d~~g~~ 307 (954)
T PRK05367 238 VAVAADLLALTL--LT-----PPGEMGADIAVGSAQRFG-VPMGFGGPHAAYFAVRDA-YK-RSMPGRIVGVSVDAAGNP 307 (954)
T ss_pred EEEEehhhhccC--CC-----ChhhcCCCEEEeeCcccC-CCCCCCCCCEEEEEECHH-HH-hhCCCCeeeeecccCCCc
Confidence 999996643333 11 112458999999999994 333 5999999864 21 22111 01111 100
Q ss_pred ----------CCCccccC-----CCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 311 ----------QPTFTLNF-----SKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 311 ----------~~~~~~~~-----tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
+...-..+ |-++..++..+.++..+|.+|++++.+++..+++||+
T Consensus 308 ~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~ 367 (954)
T PRK05367 308 ALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILA 367 (954)
T ss_pred ccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 00000112 3333334445556788999999999999999998875
No 96
>PRK07179 hypothetical protein; Provisional
Probab=99.78 E-value=9.5e-18 Score=162.97 Aligned_cols=189 Identities=9% Similarity=-0.068 Sum_probs=137.4
Q ss_pred ChHHHHHHHHHHhcccCCCc---ccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q 018437 68 MEPECDKLVMASINKNYVDM---DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~---~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (356)
..|.+.+++.+.+......+ ...........++.+.+++++|.+. .++++||++||..++.++..+
T Consensus 69 ~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~-------~~~~~sG~~An~~~l~~l~~~---- 137 (407)
T PRK07179 69 GHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGFES-------CLLCQSGWAANVGLLQTIADP---- 137 (407)
T ss_pred CCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHhCCC----
Confidence 35788888887775432111 1111111234455567999999864 688999999999998877542
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh-CceEEEEecCCCcccccCCHHH
Q 018437 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKL 223 (356)
Q Consensus 145 ~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~i~~ 223 (356)
++.|+++...|.++...++..|++++.++ ..|+++|++++++ ++++|++.+++|++|.+.|+++
T Consensus 138 ---------g~~v~~~~~~h~s~~~~~~~~g~~~~~~~------~~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~ 202 (407)
T PRK07179 138 ---------NTPVYIDFFAHMSLWEGVRAAGAQAHPFR------HNDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLAD 202 (407)
T ss_pred ---------CCEEEEECCcCHHHHHHHHHCCCeEEEec------CCCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHH
Confidence 46889999999999888888887754432 2489999999976 5788889999999999999999
Q ss_pred HHHHHHHhhhccCCCCcEEEecccccccccccCCCC---cccccCCCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 224 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL---EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 224 I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~---~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
|.++|+++ ++++|+|++|+.+..+. .... .+++ .+++|.++.+.||++++ ++|+++.++
T Consensus 203 I~~l~~~~------~~~livDea~~~g~~g~-~g~g~~~~~~~-~~~vdi~~~S~sK~~g~--~~G~l~~~~ 264 (407)
T PRK07179 203 IVDIAEEF------GCVLVVDESHSLGTHGP-QGAGLVAELGL-TSRVHFITASLAKAFAG--RAGIITCPR 264 (407)
T ss_pred HHHHHHHc------CCEEEEECcccccCcCC-CCCchHHhcCC-CCCCCEEEeechHhhhc--cCeEEEeCH
Confidence 99999999 99999999997544310 0000 1111 13679999999999854 378887754
No 97
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.78 E-value=2.9e-17 Score=158.76 Aligned_cols=212 Identities=10% Similarity=0.014 Sum_probs=157.9
Q ss_pred CCcccccccCCCC-hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHH
Q 018437 56 PRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (356)
Q Consensus 56 ~~~~l~~~~~~~~-~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (356)
..++|..+.+..+ ++.+.+++.+.+......|....+...+++++.+++.+.+|...+ ...+++|+|+++++..++
T Consensus 32 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~---~~~i~~~~g~~~a~~~~~ 108 (393)
T PRK05764 32 DVISLGAGEPDFDTPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYD---PSQVIVTTGAKQALYNAF 108 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCC---HHHEEEeCCcHHHHHHHH
Confidence 3345555555544 467888887777544344555667888999988888887775431 134899999999999888
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEEecCCC
Q 018437 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGST 213 (356)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (356)
.++.++ ++.|+++.++|..+..+++..|++++.+|+++ +.+.+|+++|++++++++++|++++|+|
T Consensus 109 ~~~~~~-------------gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~N 175 (393)
T PRK05764 109 MALLDP-------------GDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNSPSN 175 (393)
T ss_pred HHhcCC-------------CCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCccceEEEEECCCC
Confidence 876542 56899999999999999999999999999974 3478999999999988889999999999
Q ss_pred cccccC---CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCC--Ccccc--cCCCceEEEEcCCcCCCCC-cCe
Q 018437 214 LTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD--LEWDF--RLPLVKSINVSGHKYGLVY-AGV 285 (356)
Q Consensus 214 ~tG~~~---~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~--~~~~~--~~~~~Ds~~~~~hK~l~~P-~g~ 285 (356)
|||.+- ++++|.++|+++ ++++++|.+|+.+... ... ....+ .....+.+..++.|.++.| ..+
T Consensus 176 PtG~~~~~~~~~~l~~~a~~~------~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~Ri 247 (393)
T PRK05764 176 PTGAVYSPEELEAIADVAVEH------DIWVLSDEIYEKLVYD--GAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRL 247 (393)
T ss_pred CCCcccCHHHHHHHHHHHHHC------CcEEEEeccccceeeC--CCCcccHHHcCCCCcCCEEEEecCcccccCcccee
Confidence 999984 588999999999 9999999999875431 110 00111 1223456677789987533 347
Q ss_pred eEEEEe
Q 018437 286 GWVVWR 291 (356)
Q Consensus 286 g~l~~~ 291 (356)
|+++..
T Consensus 248 G~i~~~ 253 (393)
T PRK05764 248 GYAAGP 253 (393)
T ss_pred EEEecC
Confidence 888753
No 98
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.78 E-value=1.9e-17 Score=160.12 Aligned_cols=212 Identities=9% Similarity=0.006 Sum_probs=151.7
Q ss_pred CcccccccCCCC-hHHHHHHHHHHhcc-cCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHH
Q 018437 57 RLNLASFVTTWM-EPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (356)
Q Consensus 57 ~~~l~~~~~~~~-~~~v~~~i~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (356)
.++|..+.|..+ ++.+.+.+...+.. ....|....+...+++++.+++.+.+|.+.+. ...+++|+|+++++..++
T Consensus 37 ~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~--~~~i~vt~G~~~al~~~~ 114 (394)
T PRK05942 37 LIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDP--DSEALPLLGSKEGLTHLA 114 (394)
T ss_pred eEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCC--CCeEEEccChHHHHHHHH
Confidence 344444444432 34455555544432 22345445577899999999999888875321 113678999999999988
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEEecCCC
Q 018437 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGST 213 (356)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (356)
.++.++ +++|+++.|+|..+...+...|++++.+|++. +++.+|+++|++++.+++++|++++|+|
T Consensus 115 ~~~~~~-------------gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~N 181 (394)
T PRK05942 115 LAYVNP-------------GDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSN 181 (394)
T ss_pred HHhCCC-------------CCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCC
Confidence 876543 57999999999999988899999999999974 3478999999999988999999999999
Q ss_pred cccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCC-c-cccc-CCCceEEEEcCCcCC-CCCcCee
Q 018437 214 LTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-E-WDFR-LPLVKSINVSGHKYG-LVYAGVG 286 (356)
Q Consensus 214 ~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~-~~~~-~~~~Ds~~~~~hK~l-~~P~g~g 286 (356)
|||.+-+ +++|.++|+++ ++++++|++|+.+... .... . ..+. .........++.|.+ ..+..+|
T Consensus 182 PtG~~~s~~~~~~i~~~a~~~------~~~iI~De~y~~~~~~--~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG 253 (394)
T PRK05942 182 PTTATAPREFFEEIVAFARKY------EIMLVHDLCYAELAFD--GYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVG 253 (394)
T ss_pred CCCCcCCHHHHHHHHHHHHHc------CeEEEEeccchhhccC--CCCCCChhhCCCccccEEEEecchhccCChhhhee
Confidence 9999976 78899999999 9999999999865431 1000 0 1111 112233345677965 4556799
Q ss_pred EEEEe
Q 018437 287 WVVWR 291 (356)
Q Consensus 287 ~l~~~ 291 (356)
+++..
T Consensus 254 ~i~~~ 258 (394)
T PRK05942 254 FVVGN 258 (394)
T ss_pred eeecC
Confidence 99864
No 99
>PRK07777 aminotransferase; Validated
Probab=99.78 E-value=2.2e-17 Score=159.39 Aligned_cols=211 Identities=15% Similarity=0.057 Sum_probs=157.2
Q ss_pred cccccccCCCC-hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 58 LNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 58 ~~l~~~~~~~~-~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
++|..+.+... ++.+.+++.+.+......|....+..++++.+.+++.+.+|.+.+. ...+++|+|+++++..++.+
T Consensus 27 i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~--~~~i~~t~G~~~al~~~~~~ 104 (387)
T PRK07777 27 VNLGQGFPDEDGPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDP--DTEVLVTVGATEAIAAAVLG 104 (387)
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCcEEEeCCcHHHHHHHHHH
Confidence 45555544432 3456666666665444456566788999999999999988986421 12488999999999888876
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCC--ccccCHHHHHHHHhhCceEEEEecCCCc
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG--YYVMNPVKAVELVDENTICVAAILGSTL 214 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~--~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (356)
+..+ +++|+++.+.|..+..+++..|..++.++++++ ++.+|+++|++++.+++++|++++|+||
T Consensus 105 ~~~~-------------gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NP 171 (387)
T PRK07777 105 LVEP-------------GDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNP 171 (387)
T ss_pred hcCC-------------CCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCC
Confidence 6432 578999999999999999999999999998753 4789999999999888999999999999
Q ss_pred ccccC---CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCC-Ccc-ccc-CCCceEEEEcCCcCCCC-CcCeeE
Q 018437 215 TGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD-LEW-DFR-LPLVKSINVSGHKYGLV-YAGVGW 287 (356)
Q Consensus 215 tG~~~---~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~~-~~~-~~~~Ds~~~~~hK~l~~-P~g~g~ 287 (356)
||.+. ++++|.++|+++ ++++++|++|+.+... ... ... .+. ....+.+..|++|.++. ...+|+
T Consensus 172 tG~~~~~~~~~~l~~~~~~~------~~~li~De~y~~~~~~--~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~ 243 (387)
T PRK07777 172 TGTVLTAAELAAIAELAVEH------DLLVITDEVYEHLVFD--GARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGW 243 (387)
T ss_pred CCccCCHHHHHHHHHHHHhc------CcEEEEeccchhcccC--CCCcccHhhCCCCcCcEEEEeechhhccCcCceeEE
Confidence 99984 588899999999 9999999999865431 110 011 111 12356777889998753 355898
Q ss_pred EEEe
Q 018437 288 VVWR 291 (356)
Q Consensus 288 l~~~ 291 (356)
++..
T Consensus 244 ~~~~ 247 (387)
T PRK07777 244 ACGP 247 (387)
T ss_pred EecC
Confidence 8764
No 100
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.78 E-value=1.7e-17 Score=161.41 Aligned_cols=215 Identities=16% Similarity=0.113 Sum_probs=159.1
Q ss_pred cCCCCcccccccCC-----CChHHHHHHHHHHhccc-CCCcccCcchHHHHHHHHHHHHHHhC------CCCCCCCCCCe
Q 018437 53 DGNPRLNLASFVTT-----WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFN------TPVADDKTAVG 120 (356)
Q Consensus 53 ~~~~~~~l~~~~~~-----~~~~~v~~~i~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g------~~~~~~~~~~~ 120 (356)
.+.+.++|+.+.|. .+++.+.+++.+.++.. ...|....+..++++.+.+++.+.++ ...+ ...+
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~---~~~i 107 (412)
T PTZ00433 31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIK---KDNV 107 (412)
T ss_pred CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCC---hhhE
Confidence 34444577777765 34567888887776642 23454455788899888888887654 2211 1458
Q ss_pred EEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHH
Q 018437 121 VGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELV 199 (356)
Q Consensus 121 ~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i 199 (356)
++|+|+++++.+++.++..+ +++|+++.|+|..+...++..|++++.+|+++ +++.+|+++|++++
T Consensus 108 ~it~G~~~al~~~~~~~~~~-------------gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~ 174 (412)
T PTZ00433 108 VLCSGVSHAILMALTALCDE-------------GDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLV 174 (412)
T ss_pred EEeCChHHHHHHHHHHhcCC-------------CCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHh
Confidence 99999999999998877542 57899999999999999999999999999964 35899999999999
Q ss_pred hhCceEEEEecCCCcccccC---CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCC-Cc-ccccCCCce-EEEE
Q 018437 200 DENTICVAAILGSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD-LE-WDFRLPLVK-SINV 273 (356)
Q Consensus 200 ~~~~~~v~~~~~~~~tG~~~---~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~-~~~~~~~~D-s~~~ 273 (356)
++++++|++++|+||||.+- ++++|.++|+++ ++++++|++|..+... ... .. ..+. ...+ .+.-
T Consensus 175 ~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~------~~~ii~De~y~~~~~~--~~~~~~~~~~~-~~~~~i~~~ 245 (412)
T PTZ00433 175 DDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEEL------RLPLISDEIYAGMVFN--GATFTSVADFD-TTVPRVILG 245 (412)
T ss_pred ccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHc------CCeEEEeccccccccC--CCCccchhhcc-CCCceEEEc
Confidence 88899999999999999874 577889999999 9999999999875431 100 00 1111 1112 3445
Q ss_pred cCCcCC-CCCcCeeEEEEeC
Q 018437 274 SGHKYG-LVYAGVGWVVWRT 292 (356)
Q Consensus 274 ~~hK~l-~~P~g~g~l~~~~ 292 (356)
|+.|.+ .....+|++++.+
T Consensus 246 SfSK~~~~pGlRlG~~i~~~ 265 (412)
T PTZ00433 246 GTAKNLVVPGWRLGWLLLVD 265 (412)
T ss_pred cchhhcCCCCeeEEEEEEeC
Confidence 689976 5668999998743
No 101
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.78 E-value=2.2e-17 Score=172.32 Aligned_cols=301 Identities=8% Similarity=-0.039 Sum_probs=196.8
Q ss_pred ccccccc-cchhhhhcCCCCCCCC--CCCCHHHHHHHHHHHhhhcCC-CCcccccc-cCCCChHHHHHHHHHHh---cc-
Q 018437 12 EILSSTF-ASRYVRAAIPRFKMPD--NSMPKEAAYQVINDELMLDGN-PRLNLASF-VTTWMEPECDKLVMASI---NK- 82 (356)
Q Consensus 12 ~~~~~~~-~~~~~~~~~~~~~lp~--~~~~~~~i~~~~~~~~~~~~~-~~~~l~~~-~~~~~~~~v~~~i~~~~---~~- 82 (356)
++|+++| ...|..-......+|+ .++++.+++++++++...+.. ..| ++.+ .+...++.+.+.+.+.. ..
T Consensus 57 ~s~d~l~~~~iP~~i~~~~l~lp~~~~~~sE~e~~~~~~~la~kN~~~~~f-iG~G~y~~~~P~~v~~~i~~~~~~~Tay 135 (993)
T PLN02414 57 DSLDALIDATVPKSIRLDSMKLSKYDEGLTESQMLEHMKSLASKNKVFKSY-IGMGYYNTHVPPVILRNILENPGWYTQY 135 (993)
T ss_pred cCHHHHhhccCCHHHhcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCccccc-cCCCCCCccCCHHHHHHHHhChHHHhhc
Confidence 5688888 7777655444556772 578999999999988766543 222 2222 22234556656665332 22
Q ss_pred cCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCC
Q 018437 83 NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN 162 (356)
Q Consensus 83 ~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~ 162 (356)
.++.++.+++..+...+.+.++++|+|++.+ ...++.++|.+...++++.+-. ..++++|++++.
T Consensus 136 tPYqaEisQG~lqal~~~Qt~ia~LtG~~~a-----naSL~d~aTAaaea~~~a~~~~----------~g~~~~VlVs~~ 200 (993)
T PLN02414 136 TPYQAEIAQGRLESLLNYQTMITDLTGLPMS-----NASLLDEGTAAAEAMAMCNNIL----------KGKKKKFLIASN 200 (993)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHhCCChh-----hEeecCChHHHHHHHHHHHhcc----------cCCCCEEEEcCc
Confidence 4555666788899999999999999999973 4789999998887776655321 112468999999
Q ss_pred CcchHHHHH----HhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCC
Q 018437 163 VQVCWEKFA----RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWD 238 (356)
Q Consensus 163 ~h~s~~~~~----~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~ 238 (356)
.|+++...+ +..|++++.+|++.. | ...+.+..+++..| |.+|.+.|+++|+++||++ |
T Consensus 201 ~hP~~~~v~~t~a~~~GieV~~v~~~~~----~------~~~~~v~~vlvq~P-~~~G~v~dv~~I~~~ah~~------G 263 (993)
T PLN02414 201 CHPQTIDVCQTRADGLGLEVVVADEKDF----D------YSSGDVCGVLVQYP-ATDGEVLDYAEFVKNAHAN------G 263 (993)
T ss_pred cCHhHHHHHHHhhhhcCCEEEEecchhh----c------cccCceEEEEEecC-CCCeEEcCHHHHHHHHHHc------C
Confidence 999865444 456999999987531 1 11223444544444 5669999999999999999 9
Q ss_pred CcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCC-----CCCcCeeEEEEeCCCCCcccccc-ccCCCCCCCC
Q 018437 239 TPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG-----LVYAGVGWVVWRTKDDLPDELVF-HINYLGSDQP 312 (356)
Q Consensus 239 ~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l-----~~P~g~g~l~~~~~~~~~~~~~~-~~~~~~~~~~ 312 (356)
++++| +|+.....+.. +....|+|.++.++|||+ ++|. +|+++++++ .. +.++. -..|......
T Consensus 264 aL~iV-aad~lal~~l~------~pge~GADi~vgsgqKwg~P~G~GGP~-aGflavr~~-~~-r~~PgriVG~s~d~~g 333 (993)
T PLN02414 264 VKVVM-ATDLLALTMLK------PPGEWGADIVVGSAQRFGVPMGYGGPH-AAFLATSQE-YK-RLMPGRIIGVSVDSSG 333 (993)
T ss_pred CEEEE-EECHHHhcCCC------CHhhccCcEEEECCCccccCCCCCCCC-eeEEEECHH-HH-hhCCCcccCcccCCCC
Confidence 99999 76654433210 122458999999999998 4444 899999874 21 22210 1112100000
Q ss_pred C--c------------cccCCCChhHHHHHHHH-----HHHhCHHHHHHHHHHHHhccCccc
Q 018437 313 T--F------------TLNFSKGSSQIIAQYYQ-----FIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 313 ~--~------------~~~~tr~~~~~~~~~~~-----l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
. + --.+|.+.....++++. +..+|..|++++.+++.++++||+
T Consensus 334 ~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~ 395 (993)
T PLN02414 334 KPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFA 395 (993)
T ss_pred CcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH
Confidence 0 0 01345555434444443 457799999999999999998875
No 102
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.78 E-value=3.7e-18 Score=163.87 Aligned_cols=160 Identities=14% Similarity=-0.023 Sum_probs=125.3
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~ 169 (356)
.|....+|+. ++++.|.+. +++|+||++|+..++.++..+ +++|+++.+.|.....
T Consensus 52 npt~~~Le~~----lA~leg~e~-------ivvt~gg~~Ai~~~l~all~~-------------Gd~Il~~~~~y~~~~~ 107 (388)
T PRK08861 52 NPNRGLLEQT----LSELESGKG-------AVVTNCGTSALNLWVSALLGP-------------DDLIVAPHDCYGGTYR 107 (388)
T ss_pred CchHHHHHHH----HHHHhCCCe-------EEEECCHHHHHHHHHHHHcCC-------------CCEEEEcCCchHHHHH
Confidence 3455556554 888888653 899999999999999877532 5789999998875333
Q ss_pred H----HHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEec
Q 018437 170 F----ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (356)
Q Consensus 170 ~----~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~ 245 (356)
. ....|++++.++. .|+++++++++++|++|++++|+||||.+.|+++|.++|+++ ++++++|+
T Consensus 108 ~~~~~~~~~gi~v~~vd~------~d~e~l~~~i~~~tklV~lesP~NPtG~v~dl~~I~~la~~~------gi~vIvDe 175 (388)
T PRK08861 108 LFNTRANKGDFKVQFVDQ------SDAAALDAALAKKPKLILLETPSNPLVRVVDIAELCQKAKAV------GALVAVDN 175 (388)
T ss_pred HHHHHHhcCCeEEEEECC------CCHHHHHHhcCcCCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEEC
Confidence 2 2234666666642 478999999998999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeCC
Q 018437 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTK 293 (356)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~~ 293 (356)
+|..++. .. +.+ .++|.++.|.|||+++|.+ .|+++.+++
T Consensus 176 a~~~~~~--~~---pl~---~GaDivv~S~tK~l~G~~d~~gG~i~~~~~ 217 (388)
T PRK08861 176 TFLTPVL--QK---PLE---LGADFVIHSTTKYINGHSDVIGGVLITKTK 217 (388)
T ss_pred Ccccccc--CC---Ccc---cCCCEEEeecceeccCCCcceeEEEEecHH
Confidence 9986543 11 222 3899999999999998876 577766554
No 103
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.78 E-value=1.7e-17 Score=147.86 Aligned_cols=249 Identities=15% Similarity=0.123 Sum_probs=182.4
Q ss_pred HHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 018437 75 LVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDK 154 (356)
Q Consensus 75 ~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~ 154 (356)
.+.++++.+... ..+|...++..++.+-+...|..... .--++...|+.+.-.|+.....+ +
T Consensus 31 ~V~~A~~~~~lg-h~sPe~~qIm~~v~egikyVFkT~n~----~tf~isgsGh~g~E~al~N~leP-------------g 92 (385)
T KOG2862|consen 31 RVQEAMSRPSLG-HMSPEFVQIMDEVLEGIKYVFKTANA----QTFVISGSGHSGWEAALVNLLEP-------------G 92 (385)
T ss_pred HHHHhhcCCccc-cCCHHHHHHHHHHHHHHHHHhccCCC----ceEEEecCCcchHHHHHHhhcCC-------------C
Confidence 344444433322 24678888999999999988877642 12344445566766666665543 4
Q ss_pred CeEEecCCCcc--hHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh-CceEEEEecCCCcccccCC-HHHHHHHHHH
Q 018437 155 PNIVTGANVQV--CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFED-VKLLHDLLTK 230 (356)
Q Consensus 155 ~~vi~s~~~h~--s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~-i~~I~~i~~~ 230 (356)
++|++-...-. .+...++.+|++|..|+.+.. ....++.+++++.+ ++++|+++++.+.||+.+| ++.+.++|++
T Consensus 93 d~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G-~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k 171 (385)
T KOG2862|consen 93 DNVLVVSTGTWGQRAADCARRYGAEVDVVEADIG-QAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCHK 171 (385)
T ss_pred CeEEEEEechHHHHHHHHHHhhCceeeEEecCcc-cCccHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhhc
Confidence 66655444433 366778889999999998875 68899999999976 6789999999999999999 6778899999
Q ss_pred hhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCC--------cccccc
Q 018437 231 KNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL--------PDELVF 302 (356)
Q Consensus 231 ~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~--------~~~~~~ 302 (356)
| +.+++||++.+.+..+| .+...++|..-..++|.+++|.|.+++++.++..- +..+++
T Consensus 172 ~------~~lllVD~VaSlggt~F-------~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yF 238 (385)
T KOG2862|consen 172 H------EALLLVDTVASLGGTEF-------EMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYF 238 (385)
T ss_pred C------CeEEEEechhhcCCccc-------eehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEE
Confidence 9 99999999876655544 34455899999999999999999999988664221 112222
Q ss_pred ccC----CCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 303 HIN----YLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 303 ~~~----~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
+.. |.+-...-..+..|.+.....++.++|..+-++|+++.++++.+++++|.
T Consensus 239 d~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~ 295 (385)
T KOG2862|consen 239 DILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLK 295 (385)
T ss_pred eHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222 12111111234578888889999999999999999999999999999875
No 104
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.78 E-value=3.2e-17 Score=161.18 Aligned_cols=286 Identities=12% Similarity=0.012 Sum_probs=178.6
Q ss_pred HHHHHHHHHHHhhhcCCCCcccccccCCCChHHHHHHHHHHh-cccCCCc------ccCcchHHHHHHHHHHHHHHhCCC
Q 018437 39 KEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASI-NKNYVDM------DEYPVTTELQNRCVNMIAHLFNTP 111 (356)
Q Consensus 39 ~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~i~~~~-~~~~~~~------~~~~~~~~le~~~~~~la~l~g~~ 111 (356)
..++.+.+.+...+..+ .++|.. .-+..++.+.+++.+.+ +.....+ .......++|+.+++...++||..
T Consensus 19 d~~~~~~i~~e~~~q~~-~l~lia-sen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~ 96 (475)
T PLN03226 19 DPEIADIIEKEKRRQWK-GLELIA-SENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLD 96 (475)
T ss_pred CHHHHHHHHHHHHHHHc-CeeEec-CCccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCC
Confidence 45566666655544321 122211 11245678888888777 4322221 112355788888888899999988
Q ss_pred CCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecC---CCcch---HHHHHHhhCCee--E--EE
Q 018437 112 VADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA---NVQVC---WEKFARYFEVEL--K--EV 181 (356)
Q Consensus 112 ~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~---~~h~s---~~~~~~~~G~~v--~--~v 181 (356)
... ....+-+++|+.||+.++.++..+ +++|+..+ ..|.+ .....+.-+..+ . ..
T Consensus 97 ~~~--~~~nv~~~SG~~AN~av~~aL~~p-------------gD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y 161 (475)
T PLN03226 97 PEK--WGVNVQPLSGSPANFAVYTALLQP-------------HDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPY 161 (475)
T ss_pred cce--eEEecCcCchHHHHHHHHHHhCCC-------------CCEEEECCCCcCcchhhhhhhcccccccceEEEEeeee
Confidence 522 001122468899999999888653 57888733 34443 222222222222 2 23
Q ss_pred EecCCccccCHHHHHHHHhh-CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCc
Q 018437 182 KLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE 260 (356)
Q Consensus 182 ~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~ 260 (356)
+.+.+++.+|+++|++++.+ ++++|++. . +.+|...|+++|.++|+++ |++++||+||+.++.+. +..+
T Consensus 162 ~~~~~~g~iD~d~Le~~l~~~~pklIv~~-~-S~~s~~~D~a~i~~ia~~~------ga~LlvD~AH~~Gli~~--~~~~ 231 (475)
T PLN03226 162 RLDESTGLIDYDKLEKKAMLFRPKLIIAG-A-SAYPRDWDYARMRKIADKV------GALLMCDMAHISGLVAA--QEAA 231 (475)
T ss_pred eecCCCCCcCHHHHHHHHhhcCCeEEEEe-c-CcCCCccCHHHHHHHHHHc------CCEEEEEchhhhCcccC--CCCC
Confidence 44555689999999999874 66666543 3 3468889999999999999 99999999998877631 1111
Q ss_pred ccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccc---cCC--CCCCCCCccccCCCChhHHHHHHHHHHHh
Q 018437 261 WDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFH---INY--LGSDQPTFTLNFSKGSSQIIAQYYQFIRL 335 (356)
Q Consensus 261 ~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~tr~~~~~~~~~~~l~~l 335 (356)
....++|.++.++|||+++|.| |+++++++ ..+...... ..| .-.....+.+.++.+...++++.++++.+
T Consensus 232 --~p~~~~Div~~t~hK~L~GP~G-g~I~~~~~-~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i 307 (475)
T PLN03226 232 --SPFEYCDVVTTTTHKSLRGPRG-GMIFFRKG-PKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQA 307 (475)
T ss_pred --CCCCCCeEEEecCcccccCCCc-eEEEEchh-hcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHH
Confidence 1134799999999999999999 77777653 221100000 001 00000111234666677789999999999
Q ss_pred CHHHHHHHHHHHHhccCccc
Q 018437 336 GFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 336 g~~G~~~~~~~~~~~a~~l~ 355 (356)
-..|++++.++..+++++|+
T Consensus 308 ~~~~~~~~~~~~~~na~~L~ 327 (475)
T PLN03226 308 MTPEFKAYQKQVKANAAALA 327 (475)
T ss_pred hCcCHHHHHHHHHHHHHHHH
Confidence 88888888888888887764
No 105
>PLN02187 rooty/superroot1
Probab=99.77 E-value=3.9e-17 Score=160.80 Aligned_cols=213 Identities=13% Similarity=0.093 Sum_probs=159.6
Q ss_pred CCcccccccCC----C-ChHHHHHHHHHHhcccC-CCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHH
Q 018437 56 PRLNLASFVTT----W-MEPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEA 129 (356)
Q Consensus 56 ~~~~l~~~~~~----~-~~~~v~~~i~~~~~~~~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a 129 (356)
+.++|+.+.|. + +++.+.+++.+.+..+. ..|....+...+++.+.+++.+.+|.+.+. ..+++|+|++++
T Consensus 67 ~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~---~~I~it~G~~~a 143 (462)
T PLN02187 67 TILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTP---EDIFLTAGCNQG 143 (462)
T ss_pred CeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCc---ccEEEeCCHHHH
Confidence 33456665554 2 23577777777765432 345556688889999999888877665422 458999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEE
Q 018437 130 IMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAA 208 (356)
Q Consensus 130 ~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~ 208 (356)
+.+++.++.++ +++|+++.|+|+.+...++..|++++.+++.+ +++.+|+++|+++++++++++++
T Consensus 144 l~~~~~~l~~p-------------Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~~~v~i 210 (462)
T PLN02187 144 IEIVFESLARP-------------NANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVV 210 (462)
T ss_pred HHHHHHHhcCC-------------CCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCCcEEEEE
Confidence 99999887643 57999999999999999999999999999853 35899999999999888999999
Q ss_pred ecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CC-CceEEE-EcCCcC-CCC
Q 018437 209 ILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LP-LVKSIN-VSGHKY-GLV 281 (356)
Q Consensus 209 ~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~-~~Ds~~-~~~hK~-l~~ 281 (356)
++|+||||.+-+ +++|.++|+++ ++++++|++|+.+... +.....+. .. ....++ -|+.|. +..
T Consensus 211 ~nP~NPTG~v~s~e~l~~i~~~a~~~------~i~iI~DE~Y~~l~f~---~~~~~s~~~~~~~~~vi~l~SfSK~f~~p 281 (462)
T PLN02187 211 INPNNPCGNVYSHDHLKKVAETARKL------GIMVISDEVYDRTIFG---DNPFVSMGKFASIVPVLTLAGISKGWVVP 281 (462)
T ss_pred eCCCCCCCCccCHHHHHHHHHHHHHC------CCEEEEeccccccccC---CCCceeHHHhccCCcEEEEecchhhcCCc
Confidence 999999999855 78899999999 9999999999875541 11111111 11 112444 458897 666
Q ss_pred CcCeeEEEEeCC
Q 018437 282 YAGVGWVVWRTK 293 (356)
Q Consensus 282 P~g~g~l~~~~~ 293 (356)
...+|+++..++
T Consensus 282 GlRiG~~v~~~p 293 (462)
T PLN02187 282 GWKIGWIALNDP 293 (462)
T ss_pred cceeEEEEecCc
Confidence 789999987543
No 106
>PRK07550 hypothetical protein; Provisional
Probab=99.77 E-value=5.4e-17 Score=156.61 Aligned_cols=215 Identities=15% Similarity=0.051 Sum_probs=156.9
Q ss_pred CCcccccccCCCC-hHHHHHHHHHHhcc-cCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHH
Q 018437 56 PRLNLASFVTTWM-EPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (356)
Q Consensus 56 ~~~~l~~~~~~~~-~~~v~~~i~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~a 133 (356)
+.+.|+...+..+ ++.+.+++.+.+.. ....|...++..++++.+.+++.+..|...+. ..+++|+|+++++.++
T Consensus 30 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~---~~i~~t~G~~~al~~~ 106 (386)
T PRK07550 30 PLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISP---EQVHITSGCNQAFWAA 106 (386)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCc---ceEEEecCcHHHHHHH
Confidence 3445555554433 45777777765532 23345555688999999999999988875422 3588999999999888
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEEecCC
Q 018437 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGS 212 (356)
Q Consensus 134 l~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~ 212 (356)
+.++..+ +++|+++.++|..+...++..|++++.+++++ +++.+|+++|++++++++++|++++|+
T Consensus 107 ~~~l~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~P~ 173 (386)
T PRK07550 107 MVTLAGA-------------GDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITPRTRAIALVTPN 173 (386)
T ss_pred HHHhcCC-------------CCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcccCcEEEEeCCC
Confidence 8877542 57899999999999989999999999999974 457899999999999889999999999
Q ss_pred CcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCc-eEEEEcCCcCCC-CCcCeeE
Q 018437 213 TLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLV-KSINVSGHKYGL-VYAGVGW 287 (356)
Q Consensus 213 ~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~-Ds~~~~~hK~l~-~P~g~g~ 287 (356)
||||.+.+ +++|.++|+++ ++++++|++|+.+......+........... ..+..|+.|.++ ....+|+
T Consensus 174 NPtG~~~~~~~~~~i~~~~~~~------~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~ 247 (386)
T PRK07550 174 NPTGVVYPPELLHELYDLARRH------GIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGA 247 (386)
T ss_pred CCCCcccCHHHHHHHHHHHHHc------CeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEe
Confidence 99999865 78999999999 9999999999865321000000011100111 234567999875 4467899
Q ss_pred EEEeC
Q 018437 288 VVWRT 292 (356)
Q Consensus 288 l~~~~ 292 (356)
++..+
T Consensus 248 i~~~~ 252 (386)
T PRK07550 248 VVASP 252 (386)
T ss_pred eecCH
Confidence 98743
No 107
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.77 E-value=1.7e-18 Score=165.04 Aligned_cols=218 Identities=13% Similarity=0.037 Sum_probs=150.9
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCC
Q 018437 97 QNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEV 176 (356)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~ 176 (356)
-.+..+.+|++||.+. .-.++.|+|.+|..+++++.++ +++|+++...|-|+..++.+.|+
T Consensus 68 I~eAe~~aA~~fGAd~------t~flvnGsT~g~~a~i~a~~~~-------------gd~VLv~RN~HkSv~~alil~ga 128 (417)
T PF01276_consen 68 IKEAEELAARAFGADK------TFFLVNGSTSGNQAMIMALCRP-------------GDKVLVDRNCHKSVYNALILSGA 128 (417)
T ss_dssp HHHHHHHHHHHHTESE------EEEESSHHHHHHHHHHHHHTTT-------------TCEEEEETT--HHHHHHHHHHTE
T ss_pred HHHHHHHHHHhcCCCe------EEEEecCchHHHHHHHHHhcCC-------------CCEEEEcCCcHHHHHHHHHHcCC
Confidence 3466677999999985 2577888899999999988764 68999999999999999999999
Q ss_pred eeEEEEecCC----ccccCH-----HHHHHHHhhC--ce---EEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEE
Q 018437 177 ELKEVKLEEG----YYVMNP-----VKAVELVDEN--TI---CVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIH 242 (356)
Q Consensus 177 ~v~~v~~~~~----~~~~d~-----~~L~~~i~~~--~~---~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~ 242 (356)
.+++++...+ -+.+++ +.|+++|++. .+ +|++++||.. |.+.|+++|+++|+++ +++++
T Consensus 129 ~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~-Gv~~di~~I~~~~h~~------~~~ll 201 (417)
T PF01276_consen 129 IPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYY-GVCYDIKEIAEICHKH------GIPLL 201 (417)
T ss_dssp EEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TT-SEEE-HHHHHHHHCCT------ECEEE
T ss_pred eEEEecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCC-eEEECHHHHHHHhccc------CCEEE
Confidence 9999988522 135566 9999999863 23 4999999887 9999999999999999 99999
Q ss_pred EecccccccccccCCCCcccccCCCce-------EEEEcCCcCCCCCcCeeEEEEeCCC-CCccccccccCCCCCCCCCc
Q 018437 243 VDAASGGFIAPFLYPDLEWDFRLPLVK-------SINVSGHKYGLVYAGVGWVVWRTKD-DLPDELVFHINYLGSDQPTF 314 (356)
Q Consensus 243 vD~a~~~~~~~~~~~~~~~~~~~~~~D-------s~~~~~hK~l~~P~g~g~l~~~~~~-~~~~~~~~~~~~~~~~~~~~ 314 (356)
||+|+|+... | .+- +.+.-..++| .++-|.||.+.+-.+++++.+++.. ...+.+.......+.
T Consensus 202 vDEAhGah~~-F-~~l-p~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~~~~T----- 273 (417)
T PF01276_consen 202 VDEAHGAHFG-F-HPL-PRSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALSMHQT----- 273 (417)
T ss_dssp EE-TT-TTGG-C-SGG-GTTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHHHHS------
T ss_pred EEcccccccc-C-CCC-ccchhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHHHHcC-----
Confidence 9999998654 2 221 2222235788 9999999999999999999999875 222222111111211
Q ss_pred cccCCCChhHHHHHHHHHHHh-CHHHHHHHHHHHHhccC
Q 018437 315 TLNFSKGSSQIIAQYYQFIRL-GFEEITFTFISSLKVCP 352 (356)
Q Consensus 315 ~~~~tr~~~~~~~~~~~l~~l-g~~G~~~~~~~~~~~a~ 352 (356)
-|++....+++-.+...+ +.+| ++++++.++.++
T Consensus 274 ---TSPSY~lmASlD~a~~~m~~~~G-~~l~~~~i~~a~ 308 (417)
T PF01276_consen 274 ---TSPSYPLMASLDVARAQMEEEEG-RELLEEAIELAE 308 (417)
T ss_dssp ---SS--HHHHHHHHHHHHHHSHHHH-HHHHHHHHHHHH
T ss_pred ---CChHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHH
Confidence 355666677777777777 5555 334444444443
No 108
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.77 E-value=5.3e-17 Score=157.06 Aligned_cols=217 Identities=14% Similarity=0.063 Sum_probs=156.1
Q ss_pred cccccccCCC-ChHHHHHHHHHHhccc---CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHH
Q 018437 58 LNLASFVTTW-MEPECDKLVMASINKN---YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (356)
Q Consensus 58 ~~l~~~~~~~-~~~~v~~~i~~~~~~~---~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~a 133 (356)
++|..+.+.. +++.+.+++..+++.. ...|....+...+++.+.+++.+.++...+ ...+++|+|+++++..+
T Consensus 36 ~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~---~~~i~~t~G~~~al~~~ 112 (394)
T PRK06836 36 FDFSLGNPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLT---ADHIVMTCGAAGALNVA 112 (394)
T ss_pred EEecCcCCCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCC---cCcEEEeCChHHHHHHH
Confidence 4444444443 3467888887766532 233444567788888888888877665431 13488999999999988
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCC
Q 018437 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (356)
Q Consensus 134 l~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (356)
+.++..+ ++.|++++++|..+...++..|++++.+|++++++.+|+++|++++++++++|++++|+|
T Consensus 113 ~~~l~~~-------------gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~N 179 (394)
T PRK06836 113 LKAILNP-------------GDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAITPKTKAVIINSPNN 179 (394)
T ss_pred HHHhcCC-------------CCEEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcCcCceEEEEeCCCC
Confidence 8876432 578999999999999999999999999999875589999999999998999999999999
Q ss_pred cccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCC-CCcCeeEEE
Q 018437 214 LTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVV 289 (356)
Q Consensus 214 ~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~-~P~g~g~l~ 289 (356)
|||.+.| +++|.++|++..+++++++++++|++|..+... ............-..+..|..|.++ ....+|+++
T Consensus 180 PtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~ 257 (394)
T PRK06836 180 PTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYD--GAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIA 257 (394)
T ss_pred CCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccC--CCCCCChHHccCcEEEEecchhhccCcceeeEEEe
Confidence 9999866 566777788832233339999999999875431 1011111111122455667999875 456799998
Q ss_pred EeC
Q 018437 290 WRT 292 (356)
Q Consensus 290 ~~~ 292 (356)
..+
T Consensus 258 ~~~ 260 (394)
T PRK06836 258 VNP 260 (394)
T ss_pred cCH
Confidence 753
No 109
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=2.2e-17 Score=160.75 Aligned_cols=157 Identities=18% Similarity=0.082 Sum_probs=124.3
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH
Q 018437 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF 170 (356)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~ 170 (356)
|...++| +.++++.|.+. .++|++|++|+.+++.++..+ +++||++...|.+....
T Consensus 64 p~~~~le----~~lA~l~g~~~-------av~~sSGt~Al~~al~~ll~~-------------Gd~Vi~~~~~y~~t~~~ 119 (433)
T PRK08134 64 PTVAVLE----ERVAALEGGVG-------AIATASGQAALHLAIATLMGA-------------GSHIVASSALYGGSHNL 119 (433)
T ss_pred hHHHHHH----HHHHHHhCCCc-------EEEeCCHHHHHHHHHHHHhCC-------------CCEEEEeCCccHHHHHH
Confidence 4444555 45899999864 689999999999998876332 57999999998765444
Q ss_pred H----HhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecc
Q 018437 171 A----RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (356)
Q Consensus 171 ~----~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a 246 (356)
. ...|+++++++++ |+++|+++|+++|++|++.+++||+|.+.|+++|+++|+++ |+++++|++
T Consensus 120 ~~~~l~~~Gi~v~~vd~~------d~~~l~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~------gi~livD~t 187 (433)
T PRK08134 120 LHYTLRRFGIETTFVKPG------DIDGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEA------GVPLLVDST 187 (433)
T ss_pred HHHHHhhCCeEEEEECCC------CHHHHHHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHc------CCEEEEECC
Confidence 3 4479999998864 78999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCcccccCCCceEEEEcCCcCCCCCcC-eeEEEEe
Q 018437 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG-VGWVVWR 291 (356)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g-~g~l~~~ 291 (356)
++.+.. . ..+ ..++|.++.|.|||++++.. .|.+++.
T Consensus 188 ~a~~~~--~-----~pl-~~GaD~vv~S~tK~l~g~g~~~gG~v~~ 225 (433)
T PRK08134 188 FTTPYL--L-----RPF-EHGADLVYHSATKFLGGHGTAIGGVLVD 225 (433)
T ss_pred Cccccc--C-----Cch-hcCCCEEEeccccccCCCCCceEEEEEe
Confidence 976443 1 111 24899999999999865532 4445443
No 110
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.77 E-value=7e-17 Score=155.62 Aligned_cols=210 Identities=13% Similarity=-0.003 Sum_probs=154.3
Q ss_pred cccccccCCC-ChHHHHHHHHHHhccc-CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHH
Q 018437 58 LNLASFVTTW-MEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (356)
Q Consensus 58 ~~l~~~~~~~-~~~~v~~~i~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (356)
+.|+.+.+.. +++.+.+++.+.+... ...|....+..++++++.+++++.+|.+.+. ...+++|+|+++++..++.
T Consensus 32 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~--~~~vi~t~G~~~~l~~~~~ 109 (383)
T TIGR03540 32 ISLGIGDPDLPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDP--ETEVLSLIGSKEGIAHIPL 109 (383)
T ss_pred EEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCC--CCeEEECCCcHHHHHHHHH
Confidence 4555555553 3467788887765432 2345445577889999999999888886421 1236788999999999888
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCC-ccccCHHHHHHHHhhCceEEEEecCCCc
Q 018437 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDENTICVAAILGSTL 214 (356)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (356)
++.++ ++.|+++.|+|..+...++.+|++++.+|++++ ++.+|+++|++++.+++++|++++|+||
T Consensus 110 ~~~~~-------------gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NP 176 (383)
T TIGR03540 110 AFVNP-------------GDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNP 176 (383)
T ss_pred HhCCC-------------CCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCC
Confidence 76542 578999999999999999999999999999743 4778999999999888999999999999
Q ss_pred ccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-C---CCceEEEEcCCcCCC-CCcCee
Q 018437 215 TGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-L---PLVKSINVSGHKYGL-VYAGVG 286 (356)
Q Consensus 215 tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~---~~~Ds~~~~~hK~l~-~P~g~g 286 (356)
||.+-+ +++|.++|+++ ++++++|++|+.+..+ +.....+. . ........++.|.++ ....+|
T Consensus 177 tG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~l~~~---~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG 247 (383)
T TIGR03540 177 TGAVAPLKFFKELVEFAKEY------NIIVCHDNAYSEITFD---GYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIG 247 (383)
T ss_pred cCccCCHHHHHHHHHHHHHc------CEEEEEecchhhhccC---CCCCcCcccCCCcccCEEEEEecccccCCccceee
Confidence 999976 68899999999 9999999999865431 11111111 1 112344456779873 334589
Q ss_pred EEEEe
Q 018437 287 WVVWR 291 (356)
Q Consensus 287 ~l~~~ 291 (356)
+++..
T Consensus 248 ~~i~~ 252 (383)
T TIGR03540 248 MAVGN 252 (383)
T ss_pred EEeCC
Confidence 98753
No 111
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.77 E-value=5e-17 Score=157.85 Aligned_cols=214 Identities=11% Similarity=0.030 Sum_probs=156.9
Q ss_pred CCCCcccccccCCC-ChHHHHHHHHHHhccc-CCCcccCcchHHHHHHHHHHHHHHhCCC-CCCCCCCCeEEeCChhHHH
Q 018437 54 GNPRLNLASFVTTW-MEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTP-VADDKTAVGVGTVGSSEAI 130 (356)
Q Consensus 54 ~~~~~~l~~~~~~~-~~~~v~~~i~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~~~~t~Ggt~a~ 130 (356)
++..++|..+.+.. +++.+.+++...+... ...|. ..+...+++.+.+++.+.+|++ .+. ..++++|+|+++++
T Consensus 43 ~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~-~~G~~~lr~aia~~~~~~~g~~~~~~--~~~I~it~Gs~~al 119 (410)
T PRK06290 43 DMELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYA-DNGIQEFKEAAARYMEKVFGVKDIDP--VTEVIHSIGSKPAL 119 (410)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC-CCCcHHHHHHHHHHHHHHcCCCcCCC--cceEEEccCHHHHH
Confidence 33445666666554 3456777776554322 22233 3678899999999998888865 321 12489999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCC-ccccCHHHHHHHHhhCceEEEEe
Q 018437 131 MLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDENTICVAAI 209 (356)
Q Consensus 131 ~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~~~~~v~~~ 209 (356)
..++.++.++ ++.|+++.|+|..+...++..|++++.+|++++ ++.+|+++|++++.+++++|+++
T Consensus 120 ~~~~~~~~~~-------------gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~ 186 (410)
T PRK06290 120 AMLPSCFINP-------------GDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLN 186 (410)
T ss_pred HHHHHHhCCC-------------CCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEE
Confidence 8888877543 578999999999999999999999999999753 47889999999998889999999
Q ss_pred cCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCC-CCCcC
Q 018437 210 LGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYG-LVYAG 284 (356)
Q Consensus 210 ~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l-~~P~g 284 (356)
+|+||||.+-+ +++|.++|+++ ++++++|++|+.+...- .+..-..+. ....+.+.-|..|.+ .....
T Consensus 187 nP~NPTG~v~s~e~l~~l~~la~~~------~~~iI~DEaY~~~~~~~-~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlR 259 (410)
T PRK06290 187 YPNNPTGAVATKEFYEEVVDFAKEN------NIIVVQDAAYAALTFDG-KPLSFLSVPGAKEVGVEIHSLSKAYNMTGWR 259 (410)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHc------CeEEEEecchhhceeCC-CCcChhcCCCccccEEEEeechhhcCCchhh
Confidence 99999999966 57888889999 99999999998754310 000001111 123456677789987 35567
Q ss_pred eeEEEE
Q 018437 285 VGWVVW 290 (356)
Q Consensus 285 ~g~l~~ 290 (356)
+|+++.
T Consensus 260 iG~ii~ 265 (410)
T PRK06290 260 LAFVVG 265 (410)
T ss_pred eEeEEe
Confidence 899875
No 112
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.77 E-value=4.4e-17 Score=157.75 Aligned_cols=217 Identities=13% Similarity=0.008 Sum_probs=158.0
Q ss_pred CCCCcccccccCCC-ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCC-CCCCCCCCeEEeCChhHHHH
Q 018437 54 GNPRLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTP-VADDKTAVGVGTVGSSEAIM 131 (356)
Q Consensus 54 ~~~~~~l~~~~~~~-~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~~~~t~Ggt~a~~ 131 (356)
+.+.++|..+.++. +++.+.+++.+.+. ....|....+..++++.+.+++.+.+|++ .+. ...+++|+|+++++.
T Consensus 28 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~--~~~i~it~G~~~al~ 104 (396)
T PRK09147 28 DLPPISLSIGEPKHPTPAFIKDALAANLD-GLASYPTTAGLPALREAIAAWLERRYGLPALDP--ATQVLPVNGSREALF 104 (396)
T ss_pred CCCeEecCCCCCCCCCCHHHHHHHHHHhh-hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCc--cceEEECCChHHHHH
Confidence 33445555555554 35677888776664 33445555677889999999999888865 321 124788999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEEec
Q 018437 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAIL 210 (356)
Q Consensus 132 ~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~ 210 (356)
.++.++.++ +.+++.|+++.|+|..+..+++..|++++.||+++ +++.+|+++|++.+.++++++++++
T Consensus 105 ~~~~~l~~~----------~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~n 174 (396)
T PRK09147 105 AFAQTVIDR----------DGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCS 174 (396)
T ss_pred HHHHHHcCC----------CCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcC
Confidence 888877541 12246899999999999999999999999999974 3478999999998888899999999
Q ss_pred CCCcccccC---CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccc-cc---CCC-----ceEEEEcCCc-
Q 018437 211 GSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FR---LPL-----VKSINVSGHK- 277 (356)
Q Consensus 211 ~~~~tG~~~---~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~---~~~-----~Ds~~~~~hK- 277 (356)
|+||||.+- .+++|.++|+++ ++|+++|++|+.+... ....... +. ..+ --.+..|+.|
T Consensus 175 P~NPTG~~~s~~~~~~l~~~a~~~------~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 246 (396)
T PRK09147 175 PGNPTGAVLPLDDWKKLFALSDRY------GFVIASDECYSEIYFD--EAAPPLGLLEAAAELGRDDFKRLVVFHSLSKR 246 (396)
T ss_pred CCCCcCccCCHHHHHHHHHHHHHc------CeEEEeeccccccccC--CCCCCchhhhhccccCccccccEEEEeccccc
Confidence 999999985 577888889999 9999999999875431 1001110 00 001 1145567899
Q ss_pred CCCCCcCeeEEEEe
Q 018437 278 YGLVYAGVGWVVWR 291 (356)
Q Consensus 278 ~l~~P~g~g~l~~~ 291 (356)
+++....+|+++..
T Consensus 247 ~~~~GlRiG~~~~~ 260 (396)
T PRK09147 247 SNVPGLRSGFVAGD 260 (396)
T ss_pred cCCccceeeeecCC
Confidence 45666889998754
No 113
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.77 E-value=3.3e-18 Score=163.17 Aligned_cols=255 Identities=14% Similarity=0.010 Sum_probs=172.1
Q ss_pred cccCCCChHHHHHHHHHHhc----ccCCCcc---cCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEe-CChhHHHHHH
Q 018437 62 SFVTTWMEPECDKLVMASIN----KNYVDMD---EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGT-VGSSEAIMLA 133 (356)
Q Consensus 62 ~~~~~~~~~~v~~~i~~~~~----~~~~~~~---~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t-~Ggt~a~~~a 133 (356)
...|+..++.+.+++...+. ...+.+. .++.+.++.+++++.+++++|.+.+ ...+++ .+||.++-.+
T Consensus 8 ~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~----~~v~~~~gsgt~~~Ea~ 83 (360)
T PRK05355 8 SAGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDN----YKVLFLQGGASLQFAMV 83 (360)
T ss_pred cCCCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC----cEEEEEcCCchHHHHHH
Confidence 33455667889998877652 2222332 2445668899999999999998431 235555 5566666666
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHH-HHhhCceEEEEecCC
Q 018437 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVE-LVDENTICVAAILGS 212 (356)
Q Consensus 134 l~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~-~i~~~~~~v~~~~~~ 212 (356)
++.+..+ | .+...|+....+| .+.+.++..|.. ..++.++..+..+..++++ ++++++++|.+++..
T Consensus 84 ~~nl~~~--------g--~~~l~i~~G~fg~-r~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~e 151 (360)
T PRK05355 84 PMNLLGG--------G--KKADYVDTGSWSK-KAIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNE 151 (360)
T ss_pred HHhcCCC--------C--CeEEEEECCHHHH-HHHHHHHHhCCc-eEEecccccCCCCCCChhhccCCCCCCEEEEccCC
Confidence 6665432 1 0011333333444 356778888865 6677664225555555555 787789999999999
Q ss_pred CcccccC-CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 213 TLTGEFE-DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 213 ~~tG~~~-~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
|.||+.. |+++| + +++++||++++.+..| ++++ ..|.+++++||++ +|+|.|+++++
T Consensus 152 TstGv~~~~i~~i------~------g~l~vVDavss~g~~~-------idv~--~~d~~~~ssqK~l-gP~Glg~l~~s 209 (360)
T PRK05355 152 TIDGTEFHELPDT------G------DVPLVADMSSDILSRP-------IDVS--KFGLIYAGAQKNI-GPAGLTIVIVR 209 (360)
T ss_pred CcceEecCccccc------C------CCcEEEEcCccccCcc-------CCHH--HccEEEEeccccc-cCCceEEEEEC
Confidence 9999997 77776 7 9999999999876653 4443 3579999999987 59999999998
Q ss_pred CCCCCccccccccCCCCCC--CCCccccCCCChhHHHHHHHHHHHhCHH-HHHHHHHHHHhccCccc
Q 018437 292 TKDDLPDELVFHINYLGSD--QPTFTLNFSKGSSQIIAQYYQFIRLGFE-EITFTFISSLKVCPFLV 355 (356)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~tr~~~~~~~~~~~l~~lg~~-G~~~~~~~~~~~a~~l~ 355 (356)
++.+. ..-.....|.... .......+|++...++++.++|+.+-.+ |++++.+++.+++++|.
T Consensus 210 ~~~l~-~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~ 275 (360)
T PRK05355 210 EDLLG-RALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLY 275 (360)
T ss_pred HHHHh-hcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 75331 1100001111100 0111234899999999999999999999 89999999999998874
No 114
>PRK07682 hypothetical protein; Validated
Probab=99.77 E-value=2.2e-17 Score=158.85 Aligned_cols=211 Identities=11% Similarity=0.056 Sum_probs=156.6
Q ss_pred cccccccCCCC-hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 58 LNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 58 ~~l~~~~~~~~-~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
++|+.+.+... ++.+.+++.+.+......|...++...+++++.+++.+.+|.+.+. ...+++|+|+++|+.+++.+
T Consensus 23 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~--~~~i~~t~G~~~al~~~~~~ 100 (378)
T PRK07682 23 ISLGVGEPDFVTPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDP--NDEIIVTVGASQALDVAMRA 100 (378)
T ss_pred EEeCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC--CCcEEEeCChHHHHHHHHHH
Confidence 44444444432 3456777766665433445556788999999999999988875421 12489999999999998887
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEEecCCCcc
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLT 215 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (356)
+.++ ++.|++++++|+.+...++..|.+++.++++. +++.+|+++|++++.+++++|++++|+|||
T Consensus 101 l~~~-------------gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPt 167 (378)
T PRK07682 101 IINP-------------GDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPT 167 (378)
T ss_pred hCCC-------------CCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCc
Confidence 7542 57899999999999999999999999999863 348999999999998889999999999999
Q ss_pred cccC---CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCc-cccc-CCCceEEEEcCCcCCC-CCcCeeEEE
Q 018437 216 GEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFR-LPLVKSINVSGHKYGL-VYAGVGWVV 289 (356)
Q Consensus 216 G~~~---~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~-~~~~Ds~~~~~hK~l~-~P~g~g~l~ 289 (356)
|.+- ++++|.++|+++ ++++++|++|+.+... .+... ..+. ...-..+..++.|.++ ....+|+++
T Consensus 168 G~~~s~~~~~~l~~~~~~~------~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~ 239 (378)
T PRK07682 168 GAVLNKSELEEIAVIVEKH------DLIVLSDEIYAELTYD--EAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIA 239 (378)
T ss_pred CcCcCHHHHHHHHHHHHHc------CcEEEEehhhhhcccC--CCCCChhhcccccCCEEEEecCcccccChhhhhhhhh
Confidence 9985 488999999999 9999999999876541 10000 1111 1122455667899875 345689998
Q ss_pred Ee
Q 018437 290 WR 291 (356)
Q Consensus 290 ~~ 291 (356)
..
T Consensus 240 ~~ 241 (378)
T PRK07682 240 AP 241 (378)
T ss_pred cC
Confidence 74
No 115
>PRK07683 aminotransferase A; Validated
Probab=99.77 E-value=5e-17 Score=156.90 Aligned_cols=211 Identities=15% Similarity=0.143 Sum_probs=158.7
Q ss_pred cccccccCCCC-hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 58 LNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 58 ~~l~~~~~~~~-~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
++|..+.+..+ ++.+.+++.+.+..+...|...++..++++++.+++.+.+|++.+. ...+++|+|+++|+.+++.+
T Consensus 31 i~l~~~~p~~~~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~--~~~I~~t~G~~~al~~~~~~ 108 (387)
T PRK07683 31 ISLTIGQPDFPTPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSP--ESEIIVTIGASEAIDIAFRT 108 (387)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCcEEEeCChHHHHHHHHHH
Confidence 34555544433 4677888888776555555556688899999999998877875321 11489999999999988877
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCccc
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG 216 (356)
+..+ +++|+++.++|..+..+++..|++++.++++++++.+|++++++.+.++++++++++|+||||
T Consensus 109 l~~~-------------gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~p~NPtG 175 (387)
T PRK07683 109 ILEP-------------GTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAITEKTRCVVLPYPSNPTG 175 (387)
T ss_pred hCCC-------------CCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcCcCceEEEEeCCCCCCC
Confidence 6432 578999999999999999999999999999865688899999999988899999999999999
Q ss_pred ccC---CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCc-cccc-CCCceEEEEcCCcCCC-CCcCeeEEEE
Q 018437 217 EFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFR-LPLVKSINVSGHKYGL-VYAGVGWVVW 290 (356)
Q Consensus 217 ~~~---~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~-~~~~Ds~~~~~hK~l~-~P~g~g~l~~ 290 (356)
.+- ++++|.++|+++ ++++++|++|..+... .+... ..+. ...-..+..+..|.++ ....+|+++.
T Consensus 176 ~~~s~~~~~~l~~~~~~~------~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~ 247 (387)
T PRK07683 176 VTLSKEELQDIADVLKDK------NIFVLSDEIYSELVYE--QPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFA 247 (387)
T ss_pred cCCCHHHHHHHHHHHHHc------CeEEEEecccccceeC--CCcCChhhccCCcCCeEEEeeccccccCccceeEEEEc
Confidence 984 478899999999 9999999999875431 11111 1110 1122355567899886 5567899886
Q ss_pred e
Q 018437 291 R 291 (356)
Q Consensus 291 ~ 291 (356)
.
T Consensus 248 ~ 248 (387)
T PRK07683 248 P 248 (387)
T ss_pred C
Confidence 4
No 116
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.77 E-value=3.1e-17 Score=158.95 Aligned_cols=193 Identities=15% Similarity=0.102 Sum_probs=141.2
Q ss_pred HHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCC
Q 018437 71 ECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGK 150 (356)
Q Consensus 71 ~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~ 150 (356)
.+.+.+.+++..+...|..+++..+||++ +++++|.+. +++|+||++|+..++.++.++
T Consensus 33 ams~~~~~a~~~gd~~Y~~~~g~~~Leea----ia~~~g~~~-------vv~t~~Gt~Al~la~~al~~p---------- 91 (431)
T cd00617 33 AMSDYQWAAMMLGDEAYAGSKSFYDLEDA----VQDLFGFKH-------IIPTHQGRGAENILFSILLKP---------- 91 (431)
T ss_pred HHHHHHHHHHHhCCCccCCCCCHHHHHHH----HHHHHCCCe-------EEEcCCHHHHHHHHHHHhCCC----------
Confidence 44444445544444457778888888877 677778864 799999999999999887543
Q ss_pred CCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCC---------ccccCHHHHHHHHhhC----ceEEEEecCCCcc-c
Q 018437 151 PYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG---------YYVMNPVKAVELVDEN----TICVAAILGSTLT-G 216 (356)
Q Consensus 151 ~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~---------~~~~d~~~L~~~i~~~----~~~v~~~~~~~~t-G 216 (356)
+++| ++.+.+.++...+.+.|+.++.+++++. +|.+|+++|+++|+++ +++|+++.++|++ |
T Consensus 92 ---GD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG 167 (431)
T cd00617 92 ---GRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGG 167 (431)
T ss_pred ---CCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCC
Confidence 4555 6777777888889999999999999742 2559999999999865 7889999999998 7
Q ss_pred ccC---CHHHHHHHHHHhhhccCCCCcEEEeccccccccccc-------CCCCccccc---CCCceEEEEcCCcCCCCCc
Q 018437 217 EFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL-------YPDLEWDFR---LPLVKSINVSGHKYGLVYA 283 (356)
Q Consensus 217 ~~~---~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~-------~~~~~~~~~---~~~~Ds~~~~~hK~l~~P~ 283 (356)
.+- ++++|.++|++| |+++|.|+|....-.-|. ......++. ....|++++++||-+++|.
T Consensus 168 ~~~s~~~l~~i~eia~~~------gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~ 241 (431)
T cd00617 168 QPVSMANLREVRELAHKY------GIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNI 241 (431)
T ss_pred ccCCHHHHHHHHHHHHHc------CCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCcc
Confidence 774 567889999999 999999999543211011 011011111 2368999999999988887
Q ss_pred CeeEEEEeCCCC
Q 018437 284 GVGWVVWRTKDD 295 (356)
Q Consensus 284 g~g~l~~~~~~~ 295 (356)
| |+++.+++++
T Consensus 242 G-G~i~~~d~~l 252 (431)
T cd00617 242 G-GFLALRDDEL 252 (431)
T ss_pred c-eEEEeCcHHH
Confidence 4 6777766434
No 117
>PLN02368 alanine transaminase
Probab=99.77 E-value=3.6e-17 Score=158.32 Aligned_cols=201 Identities=11% Similarity=-0.010 Sum_probs=147.8
Q ss_pred ChHHHHHHHHHHh--cccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHH-HHHHHH
Q 018437 68 MEPECDKLVMASI--NKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFK-RKWQQK 144 (356)
Q Consensus 68 ~~~~v~~~i~~~~--~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~-~~~~~~ 144 (356)
+++.+.+++.... ......|....+..++++++.+++.+.+|++.+. ..+++|+|+++++..++.++. ++
T Consensus 82 p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~---~~I~it~Ga~~al~~~~~~l~~~p---- 154 (407)
T PLN02368 82 PADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDP---ELIFLTDGASKGVMQILNAVIRGE---- 154 (407)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh---hhEEEcccHHHHHHHHHHHHcCCC----
Confidence 3445566654322 1123456666688899999999999888865422 358999999999999888775 32
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhh------CceEEEEecCCCcccc
Q 018437 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDE------NTICVAAILGSTLTGE 217 (356)
Q Consensus 145 ~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~ 217 (356)
+++|+++.|+|+.+...++..|++++.||+++ ++|.+|+++|++++++ +++++++++|+||||.
T Consensus 155 ---------Gd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~ 225 (407)
T PLN02368 155 ---------KDGVLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQ 225 (407)
T ss_pred ---------CCEEEEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCc
Confidence 57899999999999999999999999999975 3589999999999974 6889999999999999
Q ss_pred cC---CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCc-ccc--cC-----CCceEEE-EcCCcCC--CCCc
Q 018437 218 FE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDF--RL-----PLVKSIN-VSGHKYG--LVYA 283 (356)
Q Consensus 218 ~~---~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~--~~-----~~~Ds~~-~~~hK~l--~~P~ 283 (356)
+- .+++|.++|+++ ++++++|++|+.+..+--.+... ..+ .+ .....++ -++.|.+ ...+
T Consensus 226 v~s~e~l~~l~~~a~~~------~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~Gl 299 (407)
T PLN02368 226 CLSEANLREILKFCYQE------RLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQ 299 (407)
T ss_pred cCCHHHHHHHHHHHHHc------CCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCcc
Confidence 84 467788889999 99999999998865410000000 000 00 0112343 4589975 3778
Q ss_pred CeeEEEE
Q 018437 284 GVGWVVW 290 (356)
Q Consensus 284 g~g~l~~ 290 (356)
.+|++++
T Consensus 300 RiGy~i~ 306 (407)
T PLN02368 300 RGGYFEM 306 (407)
T ss_pred ceEEEEE
Confidence 9999986
No 118
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.77 E-value=1.6e-17 Score=157.88 Aligned_cols=161 Identities=15% Similarity=0.089 Sum_probs=123.1
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCee
Q 018437 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (356)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v 178 (356)
++++.+++++|.+. .+++++||+|+..++.+++. ..+++|+++.++|.++..++...|+++
T Consensus 22 ~~~~~la~~~~~~~-------~~~~~sgt~al~~~l~~l~~------------~~gd~vl~~~~~~~~~~~~~~~~g~~~ 82 (352)
T cd00616 22 EFEKAFAEYLGVKY-------AVAVSSGTAALHLALRALGI------------GPGDEVIVPSFTFVATANAILLLGATP 82 (352)
T ss_pred HHHHHHHHHhCCCe-------EEEECCHHHHHHHHHHHcCC------------CCCCEEEeCCcchHHHHHHHHHcCCeE
Confidence 44455888888753 77888999999999887631 115789999999999999999999999
Q ss_pred EEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCC
Q 018437 179 KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD 258 (356)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~ 258 (356)
+.++++++++.+|+++|++++++++++|++++ ++|.+.|+++|.++|+++ ++++++|++++.+... ...
T Consensus 83 ~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~~~~i~~l~~~~------~i~li~D~a~~~g~~~--~~~ 151 (352)
T cd00616 83 VFVDIDPDTYNIDPELIEAAITPRTKAIIPVH---LYGNPADMDAIMAIAKRH------GLPVIEDAAQALGATY--KGR 151 (352)
T ss_pred EEEecCCCcCCcCHHHHHHhcCcCCeEEEEEC---CCCCcCCHHHHHHHHHHc------CCeEEEECCCCCCCeE--CCE
Confidence 99999874589999999999988898888764 689999999999999999 9999999999754431 110
Q ss_pred CcccccCCCceEEEEc--CCcCCCCCcCeeEEEEeCCC
Q 018437 259 LEWDFRLPLVKSINVS--GHKYGLVYAGVGWVVWRTKD 294 (356)
Q Consensus 259 ~~~~~~~~~~Ds~~~~--~hK~l~~P~g~g~l~~~~~~ 294 (356)
.+. ...|..++| .|||+.+|.| |+++.++++
T Consensus 152 ---~~~-~~~d~~~~S~~~~K~~~~~~g-g~~~~~~~~ 184 (352)
T cd00616 152 ---KVG-TFGDAGAFSFHPTKNLTTGEG-GAVVTNDEE 184 (352)
T ss_pred ---Ecc-cCcceeEEcCCCCCCCcccCc-eEEEECCHH
Confidence 011 123555555 5699854443 666666543
No 119
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.77 E-value=5.4e-17 Score=152.77 Aligned_cols=188 Identities=14% Similarity=0.072 Sum_probs=153.0
Q ss_pred HHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcC
Q 018437 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQG 149 (356)
Q Consensus 70 ~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g 149 (356)
....+++.+.+..++... ++...++|++ +++++|+.. .+.+++||.|+.++++++.-
T Consensus 15 ~~e~~~v~~vl~sg~i~~--G~~v~~FE~~----~ae~~G~k~-------ava~~sgT~AL~laL~al~i---------- 71 (374)
T COG0399 15 EEELAAVQEVLKSGWLTG--GPFVRRFEQA----FAEYLGVKY-------AVAVSSGTAALHLALLALAI---------- 71 (374)
T ss_pred hHHHHHHHHHHHcCCeec--ChHHHHHHHH----HHHHhCCCe-------EEEecChHHHHHHHHHhcCC----------
Confidence 566777888887666554 6677778775 899999986 78999999999999996631
Q ss_pred CCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHH
Q 018437 150 KPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLT 229 (356)
Q Consensus 150 ~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~ 229 (356)
..+++||+|+.++.+..+++-+.|+++++|++|++++.||++.||++|+++|++|+ |....|...|+++|.++|+
T Consensus 72 --g~GDeVI~ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~tKAIi---pVhl~G~~~dm~~i~~la~ 146 (374)
T COG0399 72 --GPGDEVIVPSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPRTKAII---PVHLAGQPCDMDAIMALAK 146 (374)
T ss_pred --CCCCEEEecCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccCCeEEE---EehhccCCCCHHHHHHHHH
Confidence 12579999999999999999999999999999988899999999999999999998 5566799999999999999
Q ss_pred HhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCC
Q 018437 230 KKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (356)
Q Consensus 230 ~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~ 296 (356)
+| |++++.|+|++.+.. ...+..-. ...+-++++-+.|.+.+. .-|+++.+++++.
T Consensus 147 ~~------~l~vIEDaAqa~Ga~--y~gk~vGt--~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela 202 (374)
T COG0399 147 RH------GLPVIEDAAQAHGAT--YKGKKVGS--FGDIGAFSFHATKNLTTG-EGGAVVTNDEELA 202 (374)
T ss_pred Hc------CCeEEEEcchhccCe--ecCccccc--ccceEEEEecCCCCcccc-CceEEEeCCHHHH
Confidence 99 999999999987654 23222122 335778888899998666 4588888776544
No 120
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.76 E-value=7.5e-17 Score=155.86 Aligned_cols=210 Identities=17% Similarity=0.128 Sum_probs=154.4
Q ss_pred cccccccCCC-ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 58 LNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 58 ~~l~~~~~~~-~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
+++..+.+.. +++.+.+++.+.+......|....+..++++.+.+++.+.+|.+.+. ...+++|+|+++++.+++.+
T Consensus 33 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~--~~~i~it~G~~~al~~~~~~ 110 (391)
T PRK07309 33 LKLTLGEPDFTTPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAP--ENEILVTIGATEALSASLTA 110 (391)
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC--CCcEEEeCChHHHHHHHHHH
Confidence 3444444443 34567777776665433345455678899999999998888875321 13588999999999998887
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh---CceEEEEecCCC
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGST 213 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~ 213 (356)
+..+ +++|+++.++|..+...++..|++++.+|++++++.+|++.|++++++ ++++|++++|+|
T Consensus 111 ~~~~-------------gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~N 177 (391)
T PRK07309 111 ILEP-------------GDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPAN 177 (391)
T ss_pred hcCC-------------CCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCC
Confidence 6432 578999999999999999999999999998765578999999999864 578999999999
Q ss_pred cccccC---CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc--CCCceEEEEcCCcCCC-CCcCeeE
Q 018437 214 LTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPLVKSINVSGHKYGL-VYAGVGW 287 (356)
Q Consensus 214 ~tG~~~---~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~Ds~~~~~hK~l~-~P~g~g~ 287 (356)
|||.+- ++++|.++|++| ++++++|++|+.+... +.....+. ...-..+.-|..|.++ ....+|+
T Consensus 178 PtG~~~s~~~~~~l~~~~~~~------~~~ii~D~~y~~~~~~---~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~ 248 (391)
T PRK07309 178 PTGVTYSREQIKALADVLKKY------DIFVISDEVYSELTYT---GEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGL 248 (391)
T ss_pred CCCcCcCHHHHHHHHHHHHHc------CcEEEEEccccceeeC---CCCCCCHHHhccCCEEEEecChhhccCccceeEE
Confidence 999974 488899999999 9999999999875431 11111111 1112345567999864 4456888
Q ss_pred EEEe
Q 018437 288 VVWR 291 (356)
Q Consensus 288 l~~~ 291 (356)
++..
T Consensus 249 ~v~~ 252 (391)
T PRK07309 249 IFAP 252 (391)
T ss_pred EEeC
Confidence 8864
No 121
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.76 E-value=7.6e-18 Score=159.95 Aligned_cols=244 Identities=15% Similarity=0.043 Sum_probs=169.9
Q ss_pred hHHHHHHHHHHhcc----cCCCccc---CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCC-hhHHHHHHHHHHHHH
Q 018437 69 EPECDKLVMASINK----NYVDMDE---YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVG-SSEAIMLAGLAFKRK 140 (356)
Q Consensus 69 ~~~v~~~i~~~~~~----~~~~~~~---~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~G-gt~a~~~al~~~~~~ 140 (356)
|..+.+++.+++.. ..+.+.. ++.+.++.+++++.+++++|.+.+ ..+++++| ||+|+..++..+..+
T Consensus 4 p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~----~~v~~~~gsgT~a~ea~~~nl~~~ 79 (349)
T TIGR01364 4 PEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDN----YEVLFLQGGATGQFAAVPLNLLAE 79 (349)
T ss_pred CHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCC----ceEEEEcCCchHHHHHHHHhcCCC
Confidence 45677777766652 2222322 345668889999999999998531 34677766 999999998876432
Q ss_pred HHHHHHhcCCCCCCCeEEe---cCCCcchHHHHHHhhCCeeEEEEecCC---ccccCHHHHHHHHhhCceEEEEecCCCc
Q 018437 141 WQQKRKEQGKPYDKPNIVT---GANVQVCWEKFARYFEVELKEVKLEEG---YYVMNPVKAVELVDENTICVAAILGSTL 214 (356)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~---s~~~h~s~~~~~~~~G~~v~~v~~~~~---~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (356)
++++++ ...+| .+.+.++..|+ +..+..++. .-.+|+++++ +++++++|.+++..|.
T Consensus 80 -------------~~~~l~i~~G~fg~-r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETs 142 (349)
T TIGR01364 80 -------------GKVADYIVTGAWSK-KAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETI 142 (349)
T ss_pred -------------CCeEEEEECCHHHH-HHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCc
Confidence 233332 23333 35788888899 888886531 1245666655 3467899999999999
Q ss_pred ccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCC
Q 018437 215 TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (356)
Q Consensus 215 tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~ 294 (356)
||+..| ++++.+ +++++||++++.+..| .+++ ..|.+++++||++ +|+|.|+++++++.
T Consensus 143 tGv~~~-----~l~~~~------~~l~iVDavss~g~~~-------id~~--~~d~~~~ssqK~l-gP~Glg~l~~s~~~ 201 (349)
T TIGR01364 143 HGVEFR-----ELPDVK------NAPLVADMSSNILSRP-------IDVS--KFGLIYAGAQKNI-GPAGLTVVIVRKDL 201 (349)
T ss_pred ccEecc-----eecccC------CCeEEEEccccccCcc-------CCHH--HccEEEEeccccc-CCCceEEEEECHHH
Confidence 999876 677778 9999999999876663 4443 3579999999987 59999999998753
Q ss_pred CCccccccccCCCCCC--CCCccccCCCChhHHHHHHHHHHHhCHH-HHHHHHHHHHhccCccc
Q 018437 295 DLPDELVFHINYLGSD--QPTFTLNFSKGSSQIIAQYYQFIRLGFE-EITFTFISSLKVCPFLV 355 (356)
Q Consensus 295 ~~~~~~~~~~~~~~~~--~~~~~~~~tr~~~~~~~~~~~l~~lg~~-G~~~~~~~~~~~a~~l~ 355 (356)
+. ..-.....|.... .......||++...++++..+|+.+-.+ |++++.+++..++++|.
T Consensus 202 ~~-~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~ 264 (349)
T TIGR01364 202 LG-RASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLY 264 (349)
T ss_pred Hh-hcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 21 1100111221111 0112234899999999999999999998 79999999999998874
No 122
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.76 E-value=9.2e-17 Score=155.37 Aligned_cols=218 Identities=14% Similarity=0.004 Sum_probs=157.5
Q ss_pred CCCCcccccccCCC-ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHH
Q 018437 54 GNPRLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (356)
Q Consensus 54 ~~~~~~l~~~~~~~-~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~ 132 (356)
+.+.++|..+.++. +++.+.+++.+.+. ....|....+..++++.+.+++.+.+|.+..-.....+++|+|+++++.+
T Consensus 27 ~~~~i~l~~~~p~~~~~~~~~~a~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~ 105 (393)
T TIGR03538 27 SKPPIALSIGEPKHPTPAFVLEALRENLH-GLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFA 105 (393)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHhh-ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHH
Confidence 34445565555553 45678888877654 33445555677889999999998888775210011247889999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCC-ccccCHHHHHHHHhhCceEEEEecC
Q 018437 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDENTICVAAILG 211 (356)
Q Consensus 133 al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~~~~~v~~~~~ 211 (356)
++.++.++ ++...|+++.|+|..+...++..|++++.||++++ ++.+|+++|++++.+++++|++++|
T Consensus 106 ~~~~l~~~-----------gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p 174 (393)
T TIGR03538 106 FAQAVINP-----------GQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSP 174 (393)
T ss_pred HHHHHcCC-----------CCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEEeCC
Confidence 88887643 11125999999999999999999999999999643 4789999999999888999999999
Q ss_pred CCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccc----cCCC-----ceEEEEcCCc-C
Q 018437 212 STLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF----RLPL-----VKSINVSGHK-Y 278 (356)
Q Consensus 212 ~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~----~~~~-----~Ds~~~~~hK-~ 278 (356)
+||||.+-+ +++|.++|+++ ++++++|++|..+... ........ ...+ --.+..|..| |
T Consensus 175 ~NPtG~~~s~~~~~~l~~~a~~~------~~~ii~De~Y~~~~~~--~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~ 246 (393)
T TIGR03538 175 GNPTGAVLSLDTLKKLIELADQY------GFIIASDECYSELYFD--EGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRS 246 (393)
T ss_pred CCCcCcccCHHHHHHHHHHHHHC------CEEEEECcchhhcccC--CCCCCcCHHHhcccccccccccEEEEecchhhc
Confidence 999999865 78888999999 9999999999865431 00001000 0001 1145567899 5
Q ss_pred CCCCcCeeEEEEe
Q 018437 279 GLVYAGVGWVVWR 291 (356)
Q Consensus 279 l~~P~g~g~l~~~ 291 (356)
+.....+|+++..
T Consensus 247 ~~~GlRvG~~i~~ 259 (393)
T TIGR03538 247 NLPGLRSGFVAGD 259 (393)
T ss_pred CCcccceEEEecC
Confidence 7777899998764
No 123
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.76 E-value=8.5e-17 Score=159.49 Aligned_cols=199 Identities=11% Similarity=0.011 Sum_probs=149.4
Q ss_pred HHHHHHHHHHhcc---cCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHH-HHHHHHH
Q 018437 70 PECDKLVMASINK---NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFK-RKWQQKR 145 (356)
Q Consensus 70 ~~v~~~i~~~~~~---~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~-~~~~~~~ 145 (356)
..+.+++.+++.. ....|....+..++++++.+++.+..|.+.+. ..+++|+|+++++.+++.++. ++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~---~~I~it~Ga~~al~~~~~~l~~~~----- 162 (481)
T PTZ00377 91 ADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDP---SDIFLTDGASSGIKLLLQLLIGDP----- 162 (481)
T ss_pred HHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCCh---hhEEEcCCHHHHHHHHHHHhccCC-----
Confidence 3455555555443 23446666788999999999999888876532 458999999999999998875 32
Q ss_pred HhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhh------CceEEEEecCCCccccc
Q 018437 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDE------NTICVAAILGSTLTGEF 218 (356)
Q Consensus 146 ~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~ 218 (356)
+++|+++.|+|+.+...++..|++++.||+++ ++|.+|+++|++++++ ++++|++++|+||||.+
T Consensus 163 --------gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~ 234 (481)
T PTZ00377 163 --------SDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQV 234 (481)
T ss_pred --------CCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcC
Confidence 57999999999999999999999999999975 3579999999999975 78889999999999999
Q ss_pred CC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcc-----cccCC---CceEEEE-cCCcCCC--CCcC
Q 018437 219 ED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-----DFRLP---LVKSINV-SGHKYGL--VYAG 284 (356)
Q Consensus 219 ~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-----~~~~~---~~Ds~~~-~~hK~l~--~P~g 284 (356)
.+ +++|+++|+++ ++++++|++|+.+...--.+...+ ++... ....+++ |..|.++ +.+.
T Consensus 235 ~s~e~~~~i~~~a~~~------~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlR 308 (481)
T PTZ00377 235 LTRDVMEEIIKFCYEK------GIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRR 308 (481)
T ss_pred CCHHHHHHHHHHHHHC------CCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCc
Confidence 76 88899999999 999999999987543100010000 11100 1123443 6899543 5788
Q ss_pred eeEEEE
Q 018437 285 VGWVVW 290 (356)
Q Consensus 285 ~g~l~~ 290 (356)
+|++++
T Consensus 309 iG~~~~ 314 (481)
T PTZ00377 309 GGYFEL 314 (481)
T ss_pred eEEEEE
Confidence 999986
No 124
>PRK08068 transaminase; Reviewed
Probab=99.76 E-value=9e-17 Score=155.20 Aligned_cols=210 Identities=10% Similarity=-0.030 Sum_probs=154.6
Q ss_pred cccccccCCCC-hHHHHHHHHHHhccc-CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHH
Q 018437 58 LNLASFVTTWM-EPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (356)
Q Consensus 58 ~~l~~~~~~~~-~~~v~~~i~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (356)
++|+.+.+..+ ++.+.+++.+.++.. ...|...++..++++++.+++.+.+|.+.+. ...+++|+|+++++..++.
T Consensus 35 i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~--~~~i~it~G~~~~l~~~~~ 112 (389)
T PRK08068 35 INLGQGNPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDP--ETEVAILFGGKAGLVELPQ 112 (389)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CccEEEcCCcHHHHHHHHH
Confidence 45655555443 366788887776532 2235455678899999999988877865321 1147899999999988877
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCC-ccccCHHHHHHHHhhCceEEEEecCCCc
Q 018437 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDENTICVAAILGSTL 214 (356)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (356)
++..+ ++.|+++.|+|..+...++..|++++.+|++++ ++.+|++++++++.+++++|++++|+||
T Consensus 113 ~~~~~-------------gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NP 179 (389)
T PRK08068 113 CLMNP-------------GDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNYPNNP 179 (389)
T ss_pred HhCCC-------------CCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccccceEEEEECCCCC
Confidence 76442 578999999999999999999999999999753 4789999999999888999999999999
Q ss_pred ccccCCH---HHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccc-c---CCCceEEEEcCCcCCC-CCcCee
Q 018437 215 TGEFEDV---KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-R---LPLVKSINVSGHKYGL-VYAGVG 286 (356)
Q Consensus 215 tG~~~~i---~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~---~~~~Ds~~~~~hK~l~-~P~g~g 286 (356)
||.+-+. ++|.++|+++ ++++++|++|+.+... ......+ . ...-..+..+..|.++ ....+|
T Consensus 180 TG~~~s~~~~~~l~~la~~~------~~~ii~Deay~~~~~~---~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG 250 (389)
T PRK08068 180 TGAVATKAFFEETVAFAKKH------NIGVVHDFAYGAIGFD---GQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVA 250 (389)
T ss_pred CCCcCCHHHHHHHHHHHHHc------CeEEEEehhhhhhccC---CCCCcChhhCCCccCCEEEEecchhccCCccceeE
Confidence 9999665 6778889999 9999999999764321 1111111 1 1112345567889874 556789
Q ss_pred EEEEe
Q 018437 287 WVVWR 291 (356)
Q Consensus 287 ~l~~~ 291 (356)
+++..
T Consensus 251 ~~~~~ 255 (389)
T PRK08068 251 FAVGN 255 (389)
T ss_pred eEecC
Confidence 99753
No 125
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.76 E-value=1.5e-16 Score=153.52 Aligned_cols=211 Identities=15% Similarity=0.028 Sum_probs=153.7
Q ss_pred CcccccccCCC-ChHHHHHHHHHHhccc-CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHH
Q 018437 57 RLNLASFVTTW-MEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (356)
Q Consensus 57 ~~~l~~~~~~~-~~~~v~~~i~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (356)
.+++..+.+.. +++.+.+++.+.+... ...|....+..++++++.+++.+.+|.+.+. ...+++|+|+++++..++
T Consensus 33 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~--~~~ii~t~G~~~~i~~~~ 110 (385)
T PRK09276 33 VISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDP--ETEVISLIGSKEGIAHIP 110 (385)
T ss_pred EEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC--CCcEEEccCcHHHHHHHH
Confidence 34555555443 3467788887776532 2334444567889999999999888875422 113778899999999988
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEEecCCC
Q 018437 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGST 213 (356)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (356)
.++.++ +++|++++|+|+.+...++..|++++.+|++. +.+.+|++++++++.+++++|++++|+|
T Consensus 111 ~~~~~~-------------gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~N 177 (385)
T PRK09276 111 LAFVNP-------------GDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPNN 177 (385)
T ss_pred HHhCCC-------------CCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCC
Confidence 877543 57999999999999999999999999999964 3477999999999888899999999999
Q ss_pred cccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-C---CCceEEEEcCCcCCC-CCcCe
Q 018437 214 LTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-L---PLVKSINVSGHKYGL-VYAGV 285 (356)
Q Consensus 214 ~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~---~~~Ds~~~~~hK~l~-~P~g~ 285 (356)
|||.+-+ +++|.++|+++ ++++++|++|+.+... ......+. . .....+..+..|.++ ....+
T Consensus 178 PtG~~~~~~~~~~l~~~~~~~------~~~ii~De~y~~~~~~---~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRi 248 (385)
T PRK09276 178 PTGAVADLEFFEEVVDFAKKY------DIIVCHDAAYSEIAYD---GYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRI 248 (385)
T ss_pred CCCCCCCHHHHHHHHHHHHHC------CcEEEEecchhheecC---CCCCCChhccCCCcCCEEEEecchhhcCCcchhh
Confidence 9999966 57888999999 9999999999875431 11011111 1 122344566779763 33458
Q ss_pred eEEEEe
Q 018437 286 GWVVWR 291 (356)
Q Consensus 286 g~l~~~ 291 (356)
|+++..
T Consensus 249 G~~i~~ 254 (385)
T PRK09276 249 GFAVGN 254 (385)
T ss_pred eeeeCC
Confidence 998753
No 126
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.76 E-value=3.7e-17 Score=157.95 Aligned_cols=204 Identities=15% Similarity=0.004 Sum_probs=144.1
Q ss_pred CCCCccccccc-CCC-ChHHHHHHHHHHhcccCCCc---ccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhH
Q 018437 54 GNPRLNLASFV-TTW-MEPECDKLVMASINKNYVDM---DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (356)
Q Consensus 54 ~~~~~~l~~~~-~~~-~~~~v~~~i~~~~~~~~~~~---~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~ 128 (356)
|+...++.++. +.. +++.+.+++.+.+..+...+ ....+...+.+++++++++++|.+. .+++|+| ++
T Consensus 41 g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~~------~i~~tsG-~~ 113 (397)
T PRK06939 41 GKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTED------AILYSSC-FD 113 (397)
T ss_pred CCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCCCc------EEEEcCh-HH
Confidence 33434554433 233 45778888877775432222 2234677888999999999999752 2455555 88
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh------C
Q 018437 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE------N 202 (356)
Q Consensus 129 a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~------~ 202 (356)
++..++.++.++ +++|++++++|+++...++..|++++.++. +|+++|++.+++ +
T Consensus 114 a~~~~~~~l~~~-------------gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~i~~~~~~~~~ 174 (397)
T PRK06939 114 ANGGLFETLLGK-------------EDAIISDALNHASIIDGVRLCKAKRYRYAN------NDMADLEAQLKEAKEAGAR 174 (397)
T ss_pred HHHHHHHHhCCC-------------CCEEEEEhhhhHHHHHHHHhcCCceEEeCC------CCHHHHHHHHHhhhccCCC
Confidence 888877665432 579999999999999999998988776653 478888888864 6
Q ss_pred ceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccc-cc-CCCceEEEEcCCcCCC
Q 018437 203 TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FR-LPLVKSINVSGHKYGL 280 (356)
Q Consensus 203 ~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~-~~~~Ds~~~~~hK~l~ 280 (356)
+++|+..+..+++|.+.++++|.++|+++ ++++++|++|+.+..+. ....... .. ..++|.++.++||+++
T Consensus 175 ~~~v~~~~v~~~~G~~~~~~~l~~la~~~------~~~li~De~~~~g~~~~-~~~~~~~~~~~~~~~~i~~~S~sK~~~ 247 (397)
T PRK06939 175 HKLIATDGVFSMDGDIAPLPEICDLADKY------DALVMVDDSHAVGFVGE-NGRGTVEHFGVMDRVDIITGTLGKALG 247 (397)
T ss_pred CeEEEEecCcCCCCCcCCHHHHHHHHHHh------CCEEEEECcccccCcCC-CCCCHHHHcCCCCCCcEEEEECHHHhC
Confidence 77788777889999999999999999999 99999999996333211 0110111 11 2357888899999986
Q ss_pred CCcCeeEEEEe
Q 018437 281 VYAGVGWVVWR 291 (356)
Q Consensus 281 ~P~g~g~l~~~ 291 (356)
++ ..|+++.+
T Consensus 248 g~-r~G~v~~~ 257 (397)
T PRK06939 248 GA-SGGYTAGR 257 (397)
T ss_pred cc-CceEEEeC
Confidence 55 55888764
No 127
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.76 E-value=1.4e-17 Score=160.03 Aligned_cols=156 Identities=10% Similarity=0.051 Sum_probs=123.4
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH----HHHh
Q 018437 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK----FARY 173 (356)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~----~~~~ 173 (356)
+++.+.+++++|.+. .+++++|+.|+..++. +.. .+++|+++.+.|.++.. .+..
T Consensus 50 ~~le~~la~l~g~~~-------~l~~~sG~~al~~~l~-ll~-------------~Gd~Vl~~~~~y~~~~~~~~~~~~~ 108 (378)
T TIGR01329 50 TALESLLAKLDKADR-------AFAFSSGMAALDVITR-LLN-------------NGDEIIAGDDLYGGTDRLLTQVVPR 108 (378)
T ss_pred HHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHH-HhC-------------CCCEEEEcCCCchHHHHHHHHHHHH
Confidence 456666999999853 6677777877766543 322 15789999999887654 3456
Q ss_pred hCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccccccc
Q 018437 174 FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP 253 (356)
Q Consensus 174 ~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~ 253 (356)
.|++++.++++ |++++++++++++++|++++|+||+|.+.|+++|+++|+++ +++++||++++.+..
T Consensus 109 ~G~~v~~vd~~------d~~~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~------g~~vivD~a~~~~~~- 175 (378)
T TIGR01329 109 SGVVVVHVDTT------DLDKVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQ------NALVVVDNTMMSPLL- 175 (378)
T ss_pred cCcEEEEeCCC------CHHHHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHc------CCEEEEECCCccccc-
Confidence 79999988763 78999999999999999999999999999999999999999 999999999865432
Q ss_pred ccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeCCC
Q 018437 254 FLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKD 294 (356)
Q Consensus 254 ~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~~~ 294 (356)
. .+.. .++|.+..|+|||+++|.+ .|+++++++.
T Consensus 176 -~---~~l~---~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~ 211 (378)
T TIGR01329 176 -C---NPLE---LGADIVYHSATKFLAGHSDVMAGVLAVKGEE 211 (378)
T ss_pred -C---Chhh---cCCcEEEEecceeccCCccceeEEEEeCcHH
Confidence 1 1122 3789999999999999887 8999887643
No 128
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.76 E-value=2.9e-17 Score=156.05 Aligned_cols=192 Identities=17% Similarity=0.107 Sum_probs=141.3
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+++|.+.+++.++.... ..|.. +... ++++.+++++|+++ ..+++|+|+++++..+++++.++
T Consensus 32 ~~~~~~~~a~~~~~~~~-~~y~~-~~~~----~lr~~ia~~~~~~~-----~~i~~~~G~~~~l~~~~~~l~~~------ 94 (346)
T TIGR01141 32 GPPPKAKEALRAEADKL-HRYPD-PDPA----ELKQALADYYGVDP-----EQILLGNGSDEIIELLIRAFLEP------ 94 (346)
T ss_pred CCCHHHHHHHHHhHHHh-hcCCC-CCHH----HHHHHHHHHhCcCh-----HHEEEcCCHHHHHHHHHHHhcCC------
Confidence 44577888887765322 22222 2223 45666888888765 24889999999998887776432
Q ss_pred hcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHH
Q 018437 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHD 226 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~ 226 (356)
+++|+++.++|..+...++..|++++.+|++++ +.+|+++|++++.+++++|++++++||||.+.|++++.+
T Consensus 95 -------gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~ 166 (346)
T TIGR01141 95 -------GDAVLVPPPTYSMYEISAKIHGAEVVKVPLDED-GQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEA 166 (346)
T ss_pred -------CCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCC-CCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 578999999998888888999999999999875 899999999998888999999999999999999999999
Q ss_pred HHHHhhhccCCCCcEEEecccccccccccCCCCcccc-cCCCceEEEEcCCcCCCC-CcCeeEEEEe
Q 018437 227 LLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGLV-YAGVGWVVWR 291 (356)
Q Consensus 227 i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~Ds~~~~~hK~l~~-P~g~g~l~~~ 291 (356)
+|+.+.. ++++++|++|+.+.. .....+. .....+.+..|.+|+++. +.++|+++.+
T Consensus 167 l~~~~~~----~~~ii~D~~y~~~~~----~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~ 225 (346)
T TIGR01141 167 VLERTPE----DALVVVDEAYGEFSG----EPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIAN 225 (346)
T ss_pred HHHhCCC----CcEEEEECchhhhcC----CccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecC
Confidence 9987631 899999999985332 1011111 111223455678999843 4568999874
No 129
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.75 E-value=5.1e-17 Score=156.43 Aligned_cols=203 Identities=19% Similarity=0.126 Sum_probs=145.9
Q ss_pred cccccccCC-CChHHHHHHHHHHhcccC-CCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHH
Q 018437 58 LNLASFVTT-WMEPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (356)
Q Consensus 58 ~~l~~~~~~-~~~~~v~~~i~~~~~~~~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (356)
++|+...++ ++++.+.+++.++++... ..|....+.. ++++++++++|+++ ..+++|+|+++++..++.
T Consensus 31 i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~----~lr~~ia~~l~~~~-----~~v~~~~g~t~al~~~~~ 101 (380)
T PRK06225 31 IWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPPEGFP----ELRELILKDLGLDD-----DEALITAGATESLYLVMR 101 (380)
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCcchH----HHHHHHHHhcCCCC-----CcEEEeCCHHHHHHHHHH
Confidence 344443333 345788888887776432 2232222433 45566888889876 348999999999999988
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC--CccccCHHHHHHHHhhCceEEEEecCCC
Q 018437 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE--GYYVMNPVKAVELVDENTICVAAILGST 213 (356)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~--~~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (356)
++..+ +++|++++++|..+...++..|++++.+|++. +++.+|++++++++++++++|++++|+|
T Consensus 102 ~~~~~-------------gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~N 168 (380)
T PRK06225 102 AFLSP-------------GDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLN 168 (380)
T ss_pred HhcCC-------------CCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCC
Confidence 77432 46899999999988889999999999999742 2478999999999998899999999999
Q ss_pred cccccC---CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCC-CcCeeEEE
Q 018437 214 LTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLV-YAGVGWVV 289 (356)
Q Consensus 214 ~tG~~~---~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~-P~g~g~l~ 289 (356)
|||.+. ++++|.++|+++ ++++++|++|+.+.... . ....+ .+....+..++.|+++. ...+|+++
T Consensus 169 ptG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~~~--~-~~~~~-~~~~~i~~~s~SK~~g~~G~RiG~i~ 238 (380)
T PRK06225 169 PLGSSYTEEEIKEFAEIARDN------DAFLLHDCTYRDFAREH--T-LAAEY-APEHTVTSYSFSKIFGMAGLRIGAVV 238 (380)
T ss_pred CCCcCCCHHHHHHHHHHHHHC------CcEEEEehhHHHHhccC--C-chhhc-CCCCEEEEeechhhcCCccceeEEEe
Confidence 999974 589999999999 99999999997643211 0 00111 12234445577899842 23479998
Q ss_pred EeC
Q 018437 290 WRT 292 (356)
Q Consensus 290 ~~~ 292 (356)
.++
T Consensus 239 ~~~ 241 (380)
T PRK06225 239 ATP 241 (380)
T ss_pred cCH
Confidence 753
No 130
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.75 E-value=1.2e-16 Score=154.36 Aligned_cols=214 Identities=9% Similarity=-0.057 Sum_probs=157.1
Q ss_pred cCCCCcccccccCCCC-hHHHHHHHHHHhccc-CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCC-CeEEeCChhHH
Q 018437 53 DGNPRLNLASFVTTWM-EPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTA-VGVGTVGSSEA 129 (356)
Q Consensus 53 ~~~~~~~l~~~~~~~~-~~~v~~~i~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~-~~~~t~Ggt~a 129 (356)
.+...++|..+.+..+ ++.+.+++.+.+... ...|...++...+++++.+++.+..|.+.+. . .+++|+|++++
T Consensus 28 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~---~~~I~it~Gs~~a 104 (388)
T PRK07366 28 AGKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDP---ETEVLPLIGSQEG 104 (388)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCC---cCeEEECCCcHHH
Confidence 3444455555555443 567888887766432 2345556688889999999998888865421 2 47889999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEE
Q 018437 130 IMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAA 208 (356)
Q Consensus 130 ~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~ 208 (356)
+.+++.++.++ +++|+++.|+|+.+...++..|++++.||+++ +.+.+|++++++.+.+++++|++
T Consensus 105 l~~~~~~l~~~-------------gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l 171 (388)
T PRK07366 105 TAHLPLAVLNP-------------GDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVL 171 (388)
T ss_pred HHHHHHHhCCC-------------CCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEE
Confidence 99988877543 57899999999999999999999999999974 34788999998888778899999
Q ss_pred ecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-C-CC--ceEEEEcCCcCC-C
Q 018437 209 ILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-L-PL--VKSINVSGHKYG-L 280 (356)
Q Consensus 209 ~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~-~~--~Ds~~~~~hK~l-~ 280 (356)
+.|+||||.+-+ +++|.++|+++ ++++++|++|..+... .......+. . .. .-.+.-|+.|.+ .
T Consensus 172 ~~p~NPTG~~~s~~~~~~l~~~a~~~------~~~ii~De~Y~~~~~~--~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~ 243 (388)
T PRK07366 172 SYPHNPTTAIAPLSFFQEAVAFCQQH------DLVLVHDFPYVDLVFD--GEVEPPSILQADPEKSVSIEFFTLSKSYNM 243 (388)
T ss_pred eCCCCCCCccCCHHHHHHHHHHHHHc------CeEEEEecchhhcccC--CCCCCCChhhCCCCcccEEEEeecccccCC
Confidence 999999999854 56777899999 9999999999876531 111011111 1 11 123445789987 4
Q ss_pred CCcCeeEEEE
Q 018437 281 VYAGVGWVVW 290 (356)
Q Consensus 281 ~P~g~g~l~~ 290 (356)
....+|+++.
T Consensus 244 ~GlRiG~~v~ 253 (388)
T PRK07366 244 GGFRIGFAIG 253 (388)
T ss_pred cchhheehcC
Confidence 6678999875
No 131
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.75 E-value=1.9e-17 Score=160.12 Aligned_cols=156 Identities=17% Similarity=0.031 Sum_probs=121.8
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----HHHHHHhh
Q 018437 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYF 174 (356)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s----~~~~~~~~ 174 (356)
++.+.++++.|.+. .+++++|++++.+++.++..+ +++|+++.+.|.. +...+...
T Consensus 64 ~Le~~lA~l~g~~~-------~v~~~sG~~Ai~~~l~all~p-------------GD~Vvv~~p~Y~~t~~~~~~~~~~~ 123 (405)
T PRK08776 64 LLGEALAELEGGAG-------GVITATGMGAINLVLNALLQP-------------GDTLVVPHDAYGGSWRLFNALAKKG 123 (405)
T ss_pred HHHHHHHHHhCCCc-------eEEEcCHHHHHHHHHHHHhCC-------------CCEEEEccCCchHHHHHHHHHHHhc
Confidence 34456888888753 577888899998888877542 5789999999876 44445555
Q ss_pred CCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccc
Q 018437 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (356)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (356)
|++++.++. .|+++|++++++++++|++++|+||+|.+.|+++|.++|+++ |+++++|++|..+..
T Consensus 124 g~~v~~v~~------~d~~~l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~------gi~vIvD~a~a~~~~-- 189 (405)
T PRK08776 124 HFALITADL------TDPRSLADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKV------GALTVVDNTFLSPAL-- 189 (405)
T ss_pred CcEEEEECC------CCHHHHHHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHHHc------CCEEEEECCCccccc--
Confidence 777776653 378999999988999999999999999999999999999999 999999999975322
Q ss_pred cCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeCCC
Q 018437 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKD 294 (356)
Q Consensus 255 ~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~~~ 294 (356)
. .+.. .++|.+..|+||++++|.+ .|+++.++++
T Consensus 190 ~---~pl~---~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~ 225 (405)
T PRK08776 190 Q---KPLE---FGADLVLHSTTKYINGHSDVVGGAVVARDAE 225 (405)
T ss_pred C---Cccc---ccCCEEEecCceeecCCCCceEEEEEeCCHH
Confidence 1 1122 3789999999999988865 5777766543
No 132
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.75 E-value=7e-17 Score=155.50 Aligned_cols=187 Identities=14% Similarity=0.088 Sum_probs=136.8
Q ss_pred HHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcC
Q 018437 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQG 149 (356)
Q Consensus 70 ~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g 149 (356)
+...+++.+.+..+.. ...+...++|+ .+++++|.+. .++++|||+|+.+++.++.-
T Consensus 10 ~~~~~~v~~~~~~~~~--~~g~~~~~le~----~la~~~g~~~-------~v~~~sgt~al~~~l~al~~---------- 66 (380)
T TIGR03588 10 QDDIDAVVEVLKSDFL--TQGPTVPAFEE----ALAEYVGAKY-------AVAFNSATSALHIACLALGV---------- 66 (380)
T ss_pred HHHHHHHHHHHhcCCc--cCChhHHHHHH----HHHHHHCCCe-------EEEEcCHHHHHHHHHHHcCC----------
Confidence 3345566666654332 22344455554 4888888863 56677899999999887621
Q ss_pred CCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHh----hCceEEEEecCCCcccccCCHHHHH
Q 018437 150 KPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTGEFEDVKLLH 225 (356)
Q Consensus 150 ~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~----~~~~~v~~~~~~~~tG~~~~i~~I~ 225 (356)
..+++|+++.++|.++..++...|+++++++++++++.+|+++|+++++ +++++|+++ +++|...|+++|.
T Consensus 67 --~~Gd~Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~---~~~G~~~~~~~i~ 141 (380)
T TIGR03588 67 --GPGDRVWTTPITFVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPV---DFAGKSVDMQAIA 141 (380)
T ss_pred --CCCCEEEeCCcchHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEe---CCCCccCCHHHHH
Confidence 1157999999999999999999999999999976568999999999998 678888754 4679999999999
Q ss_pred HHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCC--cCCCCCcCeeEEEEeCCCC
Q 018437 226 DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGH--KYGLVYAGVGWVVWRTKDD 295 (356)
Q Consensus 226 ~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~h--K~l~~P~g~g~l~~~~~~~ 295 (356)
++|+++ ++++++|++++.+.. ... .+... ....|..++|+| |++.+|.| |++++.+++.
T Consensus 142 ~l~~~~------~~~lI~D~a~a~g~~--~~~-~~~g~-~~~~d~~~~S~~~~K~~~~~~G-G~v~~~~~~~ 202 (380)
T TIGR03588 142 ALAKKH------GLKIIEDASHALGAE--YGG-KPVGN-CRYADATVFSFHPVKIITTAEG-GAVTTNDEEL 202 (380)
T ss_pred HHHHHc------CCEEEEECCCcccCc--cCC-EeCCC-ccccceEEEecCCCCcccccCc-eEEEECCHHH
Confidence 999999 999999999986543 111 11110 113499999988 88877654 6666655433
No 133
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.75 E-value=8.5e-17 Score=156.14 Aligned_cols=283 Identities=11% Similarity=0.021 Sum_probs=175.8
Q ss_pred HHHHHHHHHHhhhcCCCCcccccccCCCChHHHHHHHHHHhccc-----CCC--cccCcchHHHHHHHHHHHHHHhCCCC
Q 018437 40 EAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKN-----YVD--MDEYPVTTELQNRCVNMIAHLFNTPV 112 (356)
Q Consensus 40 ~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~i~~~~~~~-----~~~--~~~~~~~~~le~~~~~~la~l~g~~~ 112 (356)
.++.+.+++...+.. ..++|..- -+..++.+.+++.+.+.+. ++. |.......++|..+.+...++||++.
T Consensus 35 ~~~~~~~~~e~~rq~-~~l~Lias-EN~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~ 112 (493)
T PRK13580 35 PRIAEAIRQELADQR-SSLKLIAS-ENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEH 112 (493)
T ss_pred HHHHHHHHHHHHHHh-cCceEecc-cccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCc
Confidence 445555555544432 22233111 1245677888876555431 111 12233667999999999999999985
Q ss_pred CCCCCCCeEEeCChhHHHHHHHHHHHHH----------------------HHHHHHhcCCCCCCCeEEecC---CCcchH
Q 018437 113 ADDKTAVGVGTVGSSEAIMLAGLAFKRK----------------------WQQKRKEQGKPYDKPNIVTGA---NVQVCW 167 (356)
Q Consensus 113 ~~~~~~~~~~t~Ggt~a~~~al~~~~~~----------------------~~~~~~~~g~~~~~~~vi~s~---~~h~s~ 167 (356)
..+-..+|+.||+.+++++..+ |.+-|+. ..+++|+.-+ -.|.+.
T Consensus 113 ------anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~----~~gd~i~~l~l~~GGHlth 182 (493)
T PRK13580 113 ------AYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAE----LGNQRLLGMSLDSGGHLTH 182 (493)
T ss_pred ------ccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhcc----CCCCEEEeecCCCCCeeec
Confidence 2345567899999999998753 1111111 1145665432 234332
Q ss_pred HHHHHhhC--CeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEec
Q 018437 168 EKFARYFE--VELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (356)
Q Consensus 168 ~~~~~~~G--~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~ 245 (356)
.......| ..++..+++++++.+|.+++++.+.++++.|++++.++. |.+.|+++|.++|+++ |++++||+
T Consensus 183 g~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~-~~~~dl~~i~eia~~~------gA~L~VD~ 255 (493)
T PRK13580 183 GFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAY-PRRVNFAKLREIADEV------GAVLMVDM 255 (493)
T ss_pred CcccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCcccc-CCCcCHHHHHHHHHHc------CCEEEEEC
Confidence 22223333 456677777656899999999999998888999999998 4477999999999999 99999999
Q ss_pred ccccccccccCCCCcccc-cCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCCCChhH
Q 018437 246 ASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (356)
Q Consensus 246 a~~~~~~~~~~~~~~~~~-~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~ 324 (356)
||+.++++. ...+.+. ...++|.++.++||++++|.| |+++++++ .. +.+....+++.+ +.....
T Consensus 256 AH~~Gligg--~~~~~~~~~~~~~D~vtgT~hKaL~GP~G-G~I~~~~~-l~-~~L~~a~P~i~g---------g~l~p~ 321 (493)
T PRK13580 256 AHFAGLVAG--KVFTGDEDPVPHADIVTTTTHKTLRGPRG-GLVLAKKE-YA-DAVDKGCPLVLG---------GPLPHV 321 (493)
T ss_pred chhhceecc--ccchhhcCCCCCCcEEEeCChhhccCCCe-EEEEecHH-HH-HHHhhCCCcccC---------CCccHH
Confidence 999887741 1111011 134799999999999999997 78877643 21 221111123322 222333
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 325 IIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 325 ~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
+++...+++.+..++++++.++..+++++|+
T Consensus 322 iAA~avAl~e~~~~ef~~y~~~l~~Na~~La 352 (493)
T PRK13580 322 MAAKAVALAEARTPEFQKYAQQVVDNARALA 352 (493)
T ss_pred HHHHHHHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 4545555666544444556666666666553
No 134
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.75 E-value=1e-16 Score=154.51 Aligned_cols=210 Identities=12% Similarity=0.040 Sum_probs=153.0
Q ss_pred cccccccCCCC-hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 58 LNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 58 ~~l~~~~~~~~-~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
++|+.+.+..+ ++.+.+.+..........|....+...+++.+.+++.+.+|++.+. ..+++|+|+++++..++.+
T Consensus 32 i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~---~~i~it~G~~~al~~~~~~ 108 (384)
T PRK06348 32 IDLSLGDPDLITDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKR---NEIMATVGACHGMYLALQS 108 (384)
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCh---hhEEEcCChHHHHHHHHHH
Confidence 34444444432 3555554433333333445555677889999999998887776432 4589999999999999888
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec-CCccccCHHHHHHHHhhCceEEEEecCCCcc
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (356)
+..+ +++|+++.++|..+...++..|++++.+|++ ++++.+|+++|++++++++++|++++|+|||
T Consensus 109 ~~~~-------------gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPt 175 (384)
T PRK06348 109 ILDP-------------GDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPT 175 (384)
T ss_pred hcCC-------------CCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCCC
Confidence 7543 5789999999999999999999999999874 3357899999999998888999999999999
Q ss_pred cccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCc-cccc-CCCceEEEEcCCcCCC-CCcCeeEEE
Q 018437 216 GEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFR-LPLVKSINVSGHKYGL-VYAGVGWVV 289 (356)
Q Consensus 216 G~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~-~~~~Ds~~~~~hK~l~-~P~g~g~l~ 289 (356)
|.+-+ +++|.++|+++ ++++++|++|+.+... ..... ..+. ...-..+.-|..|.++ ....+|+++
T Consensus 176 G~~~s~~~~~~l~~~a~~~------~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v 247 (384)
T PRK06348 176 GAVFSKETLEEIAKIAIEY------DLFIISDEVYDGFSFY--EDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVI 247 (384)
T ss_pred CcCCCHHHHHHHHHHHHHC------CeEEEEecccccceeC--CCccchhhcCCCcCcEEEEecchhccCCccccceeee
Confidence 99854 78888999999 9999999999876541 11011 1111 1122344557889875 567899988
Q ss_pred Ee
Q 018437 290 WR 291 (356)
Q Consensus 290 ~~ 291 (356)
..
T Consensus 248 ~~ 249 (384)
T PRK06348 248 AP 249 (384)
T ss_pred cC
Confidence 74
No 135
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.75 E-value=2.4e-17 Score=158.95 Aligned_cols=154 Identities=18% Similarity=0.044 Sum_probs=121.5
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHH----HHHHh
Q 018437 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE----KFARY 173 (356)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~----~~~~~ 173 (356)
+++++.+++++|.+. .++|+||++|+..++.++..+ +++||++.+.|.+.. ..+..
T Consensus 64 ~~le~~la~l~g~~~-------~v~~ssG~~Ai~~al~al~~~-------------Gd~Vi~~~~~y~~t~~~~~~~~~~ 123 (390)
T PRK08133 64 TMFQERLAALEGAEA-------CVATASGMAAILAVVMALLQA-------------GDHVVSSRSLFGSTVSLFEKIFAR 123 (390)
T ss_pred HHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEccCcchhHHHHHHHHHHH
Confidence 345566899999864 688999999999998876542 578999998886533 45567
Q ss_pred hCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccccccc
Q 018437 174 FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP 253 (356)
Q Consensus 174 ~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~ 253 (356)
.|++++.++++ |+++++++++++|++|++++|+||+|.+.|+++|.++|+++ ++++++|++++.+..
T Consensus 124 ~G~~v~~vd~~------d~~~l~~~i~~~tklV~ie~p~NptG~v~dl~~I~~la~~~------gi~livD~t~~~~~~- 190 (390)
T PRK08133 124 FGIETTFVDLT------DLDAWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHAA------GALLVVDNCFCTPAL- 190 (390)
T ss_pred cCcEEEEECCC------CHHHHHHhcCcCCeEEEEECCCCCCCCcCCHHHHHHHHHHc------CCEEEEECCCccccc-
Confidence 89999888764 68899999999999999999999999999999999999999 999999999865432
Q ss_pred ccCCCCcccccCCCceEEEEcCCcCCCCCcC-e-eEEEEe
Q 018437 254 FLYPDLEWDFRLPLVKSINVSGHKYGLVYAG-V-GWVVWR 291 (356)
Q Consensus 254 ~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g-~-g~l~~~ 291 (356)
.. +. ..++|.++.|+||+++++.. . |+++.+
T Consensus 191 -~~---pl---~~g~Divv~S~sK~~~g~g~~~GG~vv~~ 223 (390)
T PRK08133 191 -QQ---PL---KLGADVVIHSATKYLDGQGRVLGGAVVGS 223 (390)
T ss_pred -CC---ch---hhCCcEEEeecceeecCCcceEeEEEEcC
Confidence 11 11 23689999999999865532 3 555543
No 136
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.75 E-value=3.7e-16 Score=151.56 Aligned_cols=209 Identities=16% Similarity=0.119 Sum_probs=153.7
Q ss_pred cccccccCC-----CChHHHHHHHHHHhccc-CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHH
Q 018437 58 LNLASFVTT-----WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIM 131 (356)
Q Consensus 58 ~~l~~~~~~-----~~~~~v~~~i~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~ 131 (356)
++|+.+.+. ++++.+.+++.+.+... ...|...++..++++++.+++.+. |.+.+ ...+++|+|+++++.
T Consensus 34 i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~-~~~~~---~~~i~~t~G~~~al~ 109 (401)
T TIGR01264 34 IKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNP-DGPIE---ADDVVLCSGCSHAIE 109 (401)
T ss_pred eecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhc-CCCCC---HHHEEECcChHHHHH
Confidence 466665553 34567888887776643 233555567788888877777653 33321 134889999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCC-ccccCHHHHHHHHhhCceEEEEec
Q 018437 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDENTICVAAIL 210 (356)
Q Consensus 132 ~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~~~~~v~~~~ 210 (356)
+++.++.++ +++|+++.++|..+...++..|++++.++++.+ ++.+|++.|++++++++++|++++
T Consensus 110 ~~~~~l~~~-------------gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~ 176 (401)
T TIGR01264 110 MCIAALANA-------------GQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALIVNN 176 (401)
T ss_pred HHHHHhCCC-------------CCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccCceEEEEcC
Confidence 998877542 568999999999999999999999999998642 489999999999988889999999
Q ss_pred CCCcccccC---CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc--CCCce-EEEEcCCcC-CCCCc
Q 018437 211 GSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPLVK-SINVSGHKY-GLVYA 283 (356)
Q Consensus 211 ~~~~tG~~~---~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~D-s~~~~~hK~-l~~P~ 283 (356)
|+||||.+. ++++|.++|+++ ++++++|++|..+..+ ......+. ..... .+.-|+.|. +....
T Consensus 177 p~NPtG~~~~~~~~~~l~~~a~~~------~~~ii~De~y~~~~~~---~~~~~~~~~~~~~~~vi~~~SfSK~~~~~Gl 247 (401)
T TIGR01264 177 PSNPCGSVFSRQHLEEILAVAERQ------CLPIIADEIYGDMVFS---GATFEPLASLSSTVPILSCGGLAKRWLVPGW 247 (401)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHC------CCEEEEEhhhhhhccC---CcccccHHHcCCCCcEEEEccCcccCCCccc
Confidence 999999985 478899999999 9999999999875531 11111111 11112 345568995 77778
Q ss_pred CeeEEEEeC
Q 018437 284 GVGWVVWRT 292 (356)
Q Consensus 284 g~g~l~~~~ 292 (356)
.+|+++..+
T Consensus 248 RiG~iv~~~ 256 (401)
T TIGR01264 248 RLGWIIIHD 256 (401)
T ss_pred eEEEEEecC
Confidence 899998754
No 137
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.75 E-value=1.5e-17 Score=158.90 Aligned_cols=250 Identities=13% Similarity=0.011 Sum_probs=165.6
Q ss_pred cCCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeC-ChhHHHHHHHHHHHHHHH
Q 018437 64 VTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTV-GSSEAIMLAGLAFKRKWQ 142 (356)
Q Consensus 64 ~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~-Ggt~a~~~al~~~~~~~~ 142 (356)
.|...++.+.+++.....+-..-...++...++.+++++.+++++|++.+ ..+++++ +||.++..+++.+..
T Consensus 10 GP~~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~----~~v~f~~gs~T~a~~~~~~~l~~--- 82 (361)
T TIGR01366 10 GPSKVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPDG----YEVILGNGGATAFWDAATFGLIE--- 82 (361)
T ss_pred CCcCCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCCCC----ceEEEECCchhHHHHHHHHhccc---
Confidence 34455677888765331111111123556778888999999999999642 3467764 599999999887642
Q ss_pred HHHHhcCCCCCCCeEEecCCCcc-hHHHHHHhh--CCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccC
Q 018437 143 QKRKEQGKPYDKPNIVTGANVQV-CWEKFARYF--EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFE 219 (356)
Q Consensus 143 ~~~~~~g~~~~~~~vi~s~~~h~-s~~~~~~~~--G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~ 219 (356)
+..++++.-.|. .+.+.+... +.+++.+++++. ..++. .+.+++++|++++.+|.||++.
T Consensus 83 -----------~~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~lV~~~h~et~tG~~~ 145 (361)
T TIGR01366 83 -----------KKSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADPG-SAPEP-----QADPGVDVIAWAHNETSTGVAV 145 (361)
T ss_pred -----------ccccEEecCHHHHHHHHHHHhhhccCCceEEecCCC-CCCCC-----ccCCCCCEEEEcccCCccceec
Confidence 123334334443 244555542 237788887653 33433 3567899999999999999999
Q ss_pred CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCc-c
Q 018437 220 DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP-D 298 (356)
Q Consensus 220 ~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~-~ 298 (356)
|+++| +|++ |++++||++++.+.. +.++. .+|.+++++|||+++|.|.++++++++.+.. .
T Consensus 146 pi~~I---~~~~------g~~~iVDavqs~g~~-------~idv~--~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~ 207 (361)
T TIGR01366 146 PVRRP---EGSD------DALVVIDATSGAGGL-------PVDIA--ETDVYYFAPQKNFASDGGLWLAIMSPAALERIE 207 (361)
T ss_pred ccccc---cccC------CCeEEEEcCccccCC-------CCCHH--HCCEEEEEchhhcCCCCceEEEEECHHHHhhhh
Confidence 99998 5788 999999999987655 34544 3899999999999988888888877642210 0
Q ss_pred ccccc----cCCCCCC-----CCCccccCCCChhHHHHHHHHHHHhCHH-HHHHHHHHHHhccCccc
Q 018437 299 ELVFH----INYLGSD-----QPTFTLNFSKGSSQIIAQYYQFIRLGFE-EITFTFISSLKVCPFLV 355 (356)
Q Consensus 299 ~~~~~----~~~~~~~-----~~~~~~~~tr~~~~~~~~~~~l~~lg~~-G~~~~~~~~~~~a~~l~ 355 (356)
..... +.|+... .......+|.+....+++..+++.+-.+ |++.+.++..++++++.
T Consensus 208 ~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~ 274 (361)
T TIGR01366 208 AIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLY 274 (361)
T ss_pred cccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 00000 0111000 0011234677777777999999999888 59999899888887764
No 138
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.75 E-value=4.5e-17 Score=157.43 Aligned_cols=162 Identities=14% Similarity=0.004 Sum_probs=121.7
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~ 169 (356)
.|....+| +.+++++|.+. ..++++|+.++..++.+...+ +++|+++.+.|.++..
T Consensus 64 ~p~~~~Le----~~lA~l~G~~~-------~~~~~sG~~Ai~~~l~~~l~~-------------Gd~Vl~~~~~y~~~~~ 119 (398)
T PRK07504 64 NPTVDMFE----KRMCALEGAED-------ARATASGMAAVTAAILCQVKA-------------GDHVVAARALFGSCRY 119 (398)
T ss_pred CchHHHHH----HHHHHHhCCCe-------eeEecCHHHHHHHHHHHHhCC-------------CCEEEEcCCchhHHHH
Confidence 34455555 45889999975 356778899988777665432 5789999988876443
Q ss_pred ----HHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEec
Q 018437 170 ----FARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (356)
Q Consensus 170 ----~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~ 245 (356)
.+...|++++.++ .+|+++++++++++|++|++++|+||+|.+.|+++|.++|+++ |+++++|+
T Consensus 120 ~~~~~~~~~G~~v~~vd------~~d~e~l~~ai~~~tklV~lesp~NptG~v~dl~~I~~la~~~------gi~lvvD~ 187 (398)
T PRK07504 120 VVETLLPRYGIESTLVD------GLDLDNWEKAVRPNTKVFFLESPTNPTLEVIDIAAVAKIANQA------GAKLVVDN 187 (398)
T ss_pred HHHHHHhhcCeEEEEEC------CCCHHHHHHhcCcCceEEEEECCCCCCcEecCHHHHHHHHHHc------CCEEEEEC
Confidence 3445688888774 2689999999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCcccccCCCceEEEEcCCcCCCCCc-CeeEEEEeCCCC
Q 018437 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA-GVGWVVWRTKDD 295 (356)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~-g~g~l~~~~~~~ 295 (356)
+|+.+.. .. +. ..++|.++.|+||+++++. ..|.+++.+++.
T Consensus 188 a~a~~~~--~~---~~---~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~ 230 (398)
T PRK07504 188 VFATPLF--QK---PL---ELGAHIVVYSATKHIDGQGRCLGGVVLSDKAW 230 (398)
T ss_pred Ccccccc--CC---ch---hhCCCEEEeeccccccCCccceEEEEEeCcHH
Confidence 9975433 11 11 2378999999999987653 344334444433
No 139
>PRK09265 aminotransferase AlaT; Validated
Probab=99.75 E-value=1.9e-16 Score=153.78 Aligned_cols=209 Identities=12% Similarity=0.042 Sum_probs=149.0
Q ss_pred CCCcccccccCC----CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHh--CCCCCCCCCCCeEEeCChhH
Q 018437 55 NPRLNLASFVTT----WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLF--NTPVADDKTAVGVGTVGSSE 128 (356)
Q Consensus 55 ~~~~~l~~~~~~----~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~--g~~~~~~~~~~~~~t~Ggt~ 128 (356)
...++|..+.+. ++++.+.+.+.+.+.. ...|....+...+++++.+++.+.. |+++ ..+++|+|+++
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~-----~~i~~t~G~~~ 106 (404)
T PRK09265 33 HKILKLNIGNPAPFGFEAPDEILRDVIRNLPT-AQGYSDSKGLFSARKAIMQYYQQKGIPDVDV-----DDIYIGNGVSE 106 (404)
T ss_pred CCeEEecCCCCCcCCCCCCHHHHHHHHHHhhc-CCCCCCCCCcHHHHHHHHHHHhccCCCCCCc-----ccEEEeCChHH
Confidence 333445444442 2345677776655442 3345455566777777777665432 4444 34889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEE
Q 018437 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVA 207 (356)
Q Consensus 129 a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~ 207 (356)
++.+++.++..+ +++|+++.++|..+..+++..|+.++.++++. +++.+|+++|++++.+++++|+
T Consensus 107 ~l~~~~~~~~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~ 173 (404)
T PRK09265 107 LIVMAMQALLNN-------------GDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIV 173 (404)
T ss_pred HHHHHHHHhCCC-------------CCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccccceEEE
Confidence 998888876432 57899999999999999999999999888864 3478999999999988899999
Q ss_pred EecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc--CCCceEEEEc-CCcCC-C
Q 018437 208 AILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPLVKSINVS-GHKYG-L 280 (356)
Q Consensus 208 ~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~Ds~~~~-~hK~l-~ 280 (356)
+++|+||||.+.+ +++|.++|+++ ++++++|++|+.+... ......+. ......++++ ..|.+ .
T Consensus 174 l~~P~NPtG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~~---~~~~~~~~~~~~~~~vi~~~S~SK~~~~ 244 (404)
T PRK09265 174 IINPNNPTGAVYSKELLEEIVEIARQH------NLIIFADEIYDKILYD---GAVHISIASLAPDLLCVTFNGLSKAYRV 244 (404)
T ss_pred EECCCCCCCcCCCHHHHHHHHHHHHHC------CCEEEEehhhhhccCC---CCCcCCHHHcCCCceEEEEecchhhccC
Confidence 9999999999987 88899999999 9999999999875431 11111111 1222344444 57987 4
Q ss_pred CCcCeeEEEEe
Q 018437 281 VYAGVGWVVWR 291 (356)
Q Consensus 281 ~P~g~g~l~~~ 291 (356)
....+|+++..
T Consensus 245 pGlRiG~~v~~ 255 (404)
T PRK09265 245 AGFRVGWMVLS 255 (404)
T ss_pred cccceEEEEEe
Confidence 55678999874
No 140
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.75 E-value=2.7e-17 Score=158.25 Aligned_cols=155 Identities=14% Similarity=-0.064 Sum_probs=119.9
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHH----Hhh
Q 018437 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA----RYF 174 (356)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~----~~~ 174 (356)
++++.++++.|.+. .++++||++++..++.++.++ +++|+++.+.|....... ...
T Consensus 56 ~L~~~lA~l~g~~~-------~i~~~sg~~Ai~~~l~~l~~~-------------GD~Vl~~~~~y~~~~~~~~~~~~~~ 115 (386)
T PRK08045 56 VVQRALAELEGGAG-------AVLTNTGMSAIHLVTTVFLKP-------------GDLLVAPHDCYGGSYRLFDSLAKRG 115 (386)
T ss_pred HHHHHHHHHhCCCe-------EEEECCHHHHHHHHHHHHcCC-------------CCEEEEcCCCcHHHHHHHHHHHhhC
Confidence 34445888888542 789999999999988876543 579999999988533222 223
Q ss_pred CCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccc
Q 018437 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (356)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (356)
|+++..++ ..|++++++++++++++|++++|+||||.+.|+++|.++|+++ ++++++|++|..+..
T Consensus 116 gi~v~~vd------~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~------g~~vivDeay~~~~~-- 181 (386)
T PRK08045 116 CYRVLFVD------QGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREA------GAVSVVDNTFLSPAL-- 181 (386)
T ss_pred CeEEEEeC------CCCHHHHHHhcccCCeEEEEECCCCCCCEecCHHHHHHHHHHc------CCEEEEECCCCcccc--
Confidence 44555543 2589999999998999999999999999999999999999999 999999999976433
Q ss_pred cCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeCC
Q 018437 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTK 293 (356)
Q Consensus 255 ~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~~ 293 (356)
.. +. ..++|.++.|.|||++++.+ .|+++.+++
T Consensus 182 ~~---pl---~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~ 216 (386)
T PRK08045 182 QN---PL---ALGADLVLHSCTKYLNGHSDVVAGVVIAKDP 216 (386)
T ss_pred CC---ch---hhCCCEEEeecceeccCCCCceeEEEEeCcH
Confidence 11 12 23789999999999988876 677776554
No 141
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.74 E-value=3.7e-17 Score=157.73 Aligned_cols=156 Identities=14% Similarity=0.067 Sum_probs=125.0
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH----HHHhh
Q 018437 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK----FARYF 174 (356)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~----~~~~~ 174 (356)
++.+.++++.|.+. +++++||++|+.+++.++.++ +++|+++.+.|..+.. .+...
T Consensus 69 ~Le~~lA~l~g~~~-------~l~~~sgt~Ai~~~l~al~~~-------------GD~Vl~~~~~y~~~~~~~~~~~~~~ 128 (394)
T PRK07050 69 ALAQRLAEIEGGRH-------ALLQPSGLAAISLVYFGLVKA-------------GDDVLIPDNAYGPNRDHGEWLARDF 128 (394)
T ss_pred HHHHHHHHHhCCCe-------EEEeccHHHHHHHHHHHHhCC-------------CCEEEEecCCcccHHHHHHHHHHhc
Confidence 44455889988753 889999999999999887543 5799999999987553 45667
Q ss_pred CCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccc
Q 018437 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (356)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (356)
|+++++++.. +.++++++++++|++|++++|+||+|.+.|+++|.++|+++ ++++++|++|+.+..
T Consensus 129 Gi~v~~vd~~------~~~~l~~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~------gi~livD~a~a~~~~-- 194 (394)
T PRK07050 129 GITVRFYDPL------IGAGIADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARAR------GVVTAIDNTYSAGLA-- 194 (394)
T ss_pred CeEEEEECCC------CHHHHHHhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHc------CCEEEEECCcccccc--
Confidence 9988887643 34788999999999999999999999999999999999999 999999999976443
Q ss_pred cCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeCCC
Q 018437 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKD 294 (356)
Q Consensus 255 ~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~~~ 294 (356)
..+ . ..++|.++.|.+|++.+..+ .|++++++++
T Consensus 195 ~~~---l---~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~ 230 (394)
T PRK07050 195 FKP---F---EHGVDISVQALTKYQSGGSDVLMGATITADAE 230 (394)
T ss_pred cCH---H---HcCCeEEEEECCceecCCCCeeEEEEEECCHH
Confidence 111 1 23789999999999876655 5777776543
No 142
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.74 E-value=2.2e-16 Score=150.41 Aligned_cols=189 Identities=16% Similarity=0.045 Sum_probs=140.6
Q ss_pred ChHHHHHHHHHHhcc-cCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 68 MEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+++.+.+++.+++.. ....|. .+... ++++.+++++|+++ ..+++|+|+++++..++.++.++
T Consensus 36 ~p~~~~~a~~~~~~~~~~~~y~-~~~~~----~lr~~ia~~~~~~~-----~~i~it~G~~~~l~~~~~~l~~~------ 99 (351)
T PRK14807 36 LPEEVIKNIQEIVKSSQVNIYP-DPTAE----KLREELARYCSVVP-----TNIFVGNGSDEIIHLIMLAFINK------ 99 (351)
T ss_pred CCHHHHHHHHHHhhcCcccCCC-CccHH----HHHHHHHHHhCCCc-----ccEEEecCHHHHHHHHHHHhcCC------
Confidence 456788888776643 222222 22333 45556777888876 34899999999998888776442
Q ss_pred hcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh-CceEEEEecCCCcccccCCHHHHH
Q 018437 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLH 225 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~i~~I~ 225 (356)
+++|+++.++|..+...++..|++++.++++++ +.+|++.+++++++ ++++|++++|+||||.+.+.+++.
T Consensus 100 -------gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~ 171 (351)
T PRK14807 100 -------GDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKED-YTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDII 171 (351)
T ss_pred -------CCEEEEeCCChHHHHHHHHHcCCeEEEeecCCC-CCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 578999999999999999999999999999864 89999999999975 889999999999999999999999
Q ss_pred HHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCC-CCcCeeEEEE
Q 018437 226 DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVW 290 (356)
Q Consensus 226 ~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~-~P~g~g~l~~ 290 (356)
++|+++ +.++++|++|+.+. ............-..+.-|..|.++ ....+|+++.
T Consensus 172 ~l~~~~------~~~~ivDe~y~~~~----~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~ 227 (351)
T PRK14807 172 KIIEKS------RGIVVVDEAYFEFY----GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVA 227 (351)
T ss_pred HHHHhC------CCEEEEeCcchhhc----ccchHHHhhhCCCEEEEecchHhcccchhceeeeec
Confidence 999998 88899999997642 1111001111111344556889875 5678899875
No 143
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.74 E-value=5.1e-17 Score=156.60 Aligned_cols=160 Identities=16% Similarity=0.039 Sum_probs=123.9
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH
Q 018437 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF 170 (356)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~ 170 (356)
+....+|+. +++++|.+. .+++++|++|+..++.++.++ +++|+++.+.|.+....
T Consensus 61 p~~~~Le~~----lA~~~g~~~-------~i~~~sG~~Ai~~~l~all~~-------------Gd~Vl~~~~~y~~t~~~ 116 (388)
T PRK07811 61 PTRTALEEQ----LAALEGGAY-------GRAFSSGMAATDCLLRAVLRP-------------GDHIVIPNDAYGGTFRL 116 (388)
T ss_pred ccHHHHHHH----HHHHhCCCc-------eEEeCCHHHHHHHHHHHHhCC-------------CCEEEEcCCCchHHHHH
Confidence 455555554 888888875 456677899999999887543 57899999998854333
Q ss_pred H----HhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecc
Q 018437 171 A----RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (356)
Q Consensus 171 ~----~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a 246 (356)
. ...|++++.++. .|+++|++++++++++|+++.|+||+|.+.|+++|.++|+++ ++++++|++
T Consensus 117 ~~~~~~~~gi~~~~~d~------~d~e~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~------gi~lIvD~a 184 (388)
T PRK07811 117 IDKVFTRWGVEYTPVDL------SDLDAVRAAITPRTKLIWVETPTNPLLSITDIAALAELAHDA------GAKVVVDNT 184 (388)
T ss_pred HHHhCcCCCeEEEEeCC------CCHHHHHHhcCcCCeEEEEECCCCCcceecCHHHHHHHHHHc------CCEEEEECC
Confidence 2 234777666653 389999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeCCC
Q 018437 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKD 294 (356)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~~~ 294 (356)
|+.+.. .. +. ..++|.++.|.+|++++|.+ .|+++.+++.
T Consensus 185 ~a~~~~--~~---p~---~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~ 226 (388)
T PRK07811 185 FASPYL--QQ---PL---ALGADVVVHSTTKYIGGHSDVVGGALVTNDEE 226 (388)
T ss_pred CCcccc--CC---ch---hhCCcEEEecCceeecCCCCcEEEEEEECCHH
Confidence 976433 11 11 23789999999999987765 5888776543
No 144
>PLN02231 alanine transaminase
Probab=99.74 E-value=3.4e-16 Score=156.19 Aligned_cols=185 Identities=11% Similarity=0.007 Sum_probs=143.9
Q ss_pred CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCC
Q 018437 84 YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANV 163 (356)
Q Consensus 84 ~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~ 163 (356)
.+.|....|...+++.+.+++.+..|.+.+. .++++|+|+++++.+++.++... .++.|+++.|+
T Consensus 161 ~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~p---e~I~iT~Ga~~ai~~~~~~l~~~------------~gd~Vli~~P~ 225 (534)
T PLN02231 161 TGAYSHSQGIKGLRDAIAAGIEARDGFPADP---NDIFLTDGASPAVHMMMQLLIRS------------EKDGILCPIPQ 225 (534)
T ss_pred ccCcCCCCCcHHHHHHHHHHHHhccCCCCCc---ccEEEeCCHHHHHHHHHHHhccC------------CCCEEEEeCCC
Confidence 3457777899999999999999888876532 45899999999999999887531 15789999999
Q ss_pred cchHHHHHHhhCCeeEEEEecCC-ccccCHHHHHHHHhh------CceEEEEecCCCcccccC---CHHHHHHHHHHhhh
Q 018437 164 QVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDE------NTICVAAILGSTLTGEFE---DVKLLHDLLTKKNE 233 (356)
Q Consensus 164 h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~---~i~~I~~i~~~~~~ 233 (356)
|+.+...++..|+.++.++++++ +|.+|+++|++++++ +++++++++|+||||.+- .+++|.++|+++
T Consensus 226 Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~-- 303 (534)
T PLN02231 226 YPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQE-- 303 (534)
T ss_pred ChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHc--
Confidence 99999999999999999999853 489999999999875 678899999999999984 577899999999
Q ss_pred ccCCCCcEEEecccccccccccCCCCccccc-C--------CCceEEEE-cCCcCC--CCCcCeeEEEEe
Q 018437 234 ETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-L--------PLVKSINV-SGHKYG--LVYAGVGWVVWR 291 (356)
Q Consensus 234 ~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~--------~~~Ds~~~-~~hK~l--~~P~g~g~l~~~ 291 (356)
++++++|++|..++.. .......+. + .....+++ |..|.+ .+...+|++.+.
T Consensus 304 ----~l~lI~DEvY~~l~y~--~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~ 367 (534)
T PLN02231 304 ----GLVLLADEVYQENVYV--PDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 367 (534)
T ss_pred ----CCEEEEEccchhcccC--CCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEe
Confidence 9999999999876541 111111111 1 11224444 689954 367889999763
No 145
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.74 E-value=4.7e-17 Score=155.96 Aligned_cols=158 Identities=16% Similarity=0.068 Sum_probs=124.8
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~ 169 (356)
.|....+|++ ++++.|.+. .++++||++|+..++.++..+ +++||++++.|.....
T Consensus 49 nPt~~~lE~~----lA~l~g~~~-------~~~~~sG~~Ai~~al~all~~-------------GD~Vl~~~~~y~~t~~ 104 (377)
T TIGR01324 49 TLTHFALQDA----MCELEGGAG-------CYLYPSGLAAVTNSILAFVKA-------------GDHVLMVDSAYEPTRY 104 (377)
T ss_pred CccHHHHHHH----HHHHhCCCc-------EEEECcHHHHHHHHHHHhcCC-------------CCEEEEcCCCcHHHHH
Confidence 3555666665 888888764 788999999999999877543 5789999998876554
Q ss_pred H----HHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEec
Q 018437 170 F----ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (356)
Q Consensus 170 ~----~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~ 245 (356)
. ++..|++++.++.+ +.+.++++++++|++|++++|+|++|.+.|+++|+++|+++ ++++++|+
T Consensus 105 ~~~~~~~~~gi~v~~~d~~------~~e~l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~------g~~livD~ 172 (377)
T TIGR01324 105 FCDIVLKRMGVDITYYDPL------IGEDIATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNP------GIVIMIDN 172 (377)
T ss_pred HHHHHHHhcCcEEEEECCC------CHHHHHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHc------CCEEEEEC
Confidence 3 34567877776532 22789999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEe
Q 018437 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWR 291 (356)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~ 291 (356)
+|+.+.. ..+ . ..++|.+..|.|||++++.+ .|+++.+
T Consensus 173 t~a~g~~--~~p---l---~~gaDivv~S~tK~l~G~~d~~gG~v~~~ 212 (377)
T TIGR01324 173 TWAAGLL--FKP---L---EHGVDISIQAGTKYLVGHSDIMIGTVVAN 212 (377)
T ss_pred CCccccc--cCc---c---ccCceEEEecCceeccCCCCceEEEEEeC
Confidence 9986544 111 1 24899999999999988765 5766654
No 146
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.73 E-value=4.1e-17 Score=157.35 Aligned_cols=155 Identities=16% Similarity=0.049 Sum_probs=120.7
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----HHHHHHhh
Q 018437 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYF 174 (356)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s----~~~~~~~~ 174 (356)
++++.++++.|.+. .++++.|+.++..++. +..+ +++|+++.+.|.+ +...++..
T Consensus 58 ~le~~lA~l~g~~~-------~v~~~sG~~ai~~~l~-~l~~-------------Gd~Vlv~~~~y~~~~~~~~~~~~~~ 116 (390)
T PRK08064 58 ALEDIIAELEGGTK-------GFAFASGMAAISTAFL-LLSK-------------GDHVLISEDVYGGTYRMITEVLSRF 116 (390)
T ss_pred HHHHHHHHHhCCCC-------eEEECCHHHHHHHHHH-HhCC-------------CCEEEEccCccchHHHHHHHHHHHc
Confidence 44455899999864 3555666777766664 3221 5789999998864 33556678
Q ss_pred CCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccc
Q 018437 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (356)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (356)
|++++.++++ |++++++++++++++|++++|+||+|.+.|+++|.++|+++ ++++++|++|+.+..
T Consensus 117 G~~v~~v~~~------d~~~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la~~~------g~~vvvD~a~~~~~~-- 182 (390)
T PRK08064 117 GIEHTFVDMT------NLEEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAI------GCLTFVDNTFLTPLL-- 182 (390)
T ss_pred CCEEEEECCC------CHHHHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHHHHc------CCEEEEECCCCcccc--
Confidence 9999998863 68999999999999999999999999999999999999999 999999999876433
Q ss_pred cCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeCCC
Q 018437 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKD 294 (356)
Q Consensus 255 ~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~~~ 294 (356)
.. +. ..++|.+..|+|||+++|.| .|++++++++
T Consensus 183 ~~---~~---~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~ 218 (390)
T PRK08064 183 QK---PL---DLGADVVLHSATKFLAGHSDVLAGLAVVKDEE 218 (390)
T ss_pred cC---ch---hhCCcEEEeecceeccCCccceeEEEEeCCHH
Confidence 11 11 23789999999999988887 5888876543
No 147
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.73 E-value=2.6e-16 Score=151.42 Aligned_cols=190 Identities=12% Similarity=-0.040 Sum_probs=132.9
Q ss_pred ChHHHHHHHHHHhcccCC---CcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q 018437 68 MEPECDKLVMASINKNYV---DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~---~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (356)
++|.+.+++.+.+..... .+....+...+..++++++++++|.+. .+++++|++++..++.++.++
T Consensus 54 ~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~-------~i~~~~g~~~~~~~l~~~~~~---- 122 (385)
T PRK05958 54 RHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGAER-------ALLFSSGYAANLAVLTALAGK---- 122 (385)
T ss_pred CCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCc-------EEEECcHHHHHHHHHHHhCCC----
Confidence 457788888877653211 111222445667788889999998532 577778888887766654321
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh---CceEEEEecCCCcccccCCH
Q 018437 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFEDV 221 (356)
Q Consensus 145 ~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~~~i 221 (356)
+++|+++.++|+++...++..|++++.++. .|++.+++++++ ++.++++..++|++|.+.++
T Consensus 123 ---------gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~------~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l 187 (385)
T PRK05958 123 ---------GDLIVSDKLNHASLIDGARLSRARVRRYPH------NDVDALEALLAKWRAGRALIVTESVFSMDGDLAPL 187 (385)
T ss_pred ---------CCEEEEeCccCHHHHHHHHhcCCceEEeCC------CCHHHHHHHHHhccCCCeEEEEEecccCCCCcCCH
Confidence 578999999999999999998999888764 278899998875 35667777788999999999
Q ss_pred HHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCc--ccccCCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 222 ~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
++|.++|+++ |+++++|++|+.+..+....... ..+....-+.+..+.||++ ++.| |+++..
T Consensus 188 ~~i~~ia~~~------~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G-g~~~~~ 251 (385)
T PRK05958 188 AELVALARRH------GAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKAL-GSSG-AAVLGS 251 (385)
T ss_pred HHHHHHHHHh------CCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhc-ccCC-cEEEcC
Confidence 9999999999 99999999997554321000000 1111112335567899998 4555 666543
No 148
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.73 E-value=5.2e-17 Score=156.22 Aligned_cols=160 Identities=15% Similarity=0.018 Sum_probs=124.9
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~ 169 (356)
.|...++|+. +++++|.+. .+++++|+.|+..++.++..+ +++|+++.+.|.+...
T Consensus 52 np~~~~lE~~----lA~l~g~~~-------~l~~~sG~~Ai~~~l~~ll~~-------------GD~Vlv~~~~y~~~~~ 107 (385)
T PRK08574 52 NPTLRPLEEA----LAKLEGGVD-------ALAFNSGMAAISTLFFSLLKA-------------GDRVVLPMEAYGTTLR 107 (385)
T ss_pred CccHHHHHHH----HHHHhCCCc-------EEEeCCHHHHHHHHHHHHhCC-------------CCEEEEcCCCchhHHH
Confidence 4455666655 888888764 678889999999988876542 5799999999998766
Q ss_pred HHH---hhCCeeEEEEecCCccccCHHHHHHHHhh-CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEec
Q 018437 170 FAR---YFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (356)
Q Consensus 170 ~~~---~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~ 245 (356)
.++ ..|++++.++ +|+++|++++++ ++++|++.+++||+|.+.|+++|.++|+++ ++++++|+
T Consensus 108 ~~~~~~~~g~~v~~~~-------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~------gi~livD~ 174 (385)
T PRK08574 108 LLKSLEKFGVKVVLAY-------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKEL------GAILVVDN 174 (385)
T ss_pred HHHHhhccCcEEEEEC-------CCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHc------CCEEEEEC
Confidence 654 3466666543 357899999988 899999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeCCC
Q 018437 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKD 294 (356)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~~~ 294 (356)
+++.++. ..+ . ..++|.++.|.||++++|.+ .|++++.+++
T Consensus 175 t~a~~~~--~~~---l---~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~ 217 (385)
T PRK08574 175 TFATPLL--YRP---L---RHGADFVVHSLTKYIAGHNDVVGGVAVAWSGE 217 (385)
T ss_pred CCCcccc--CCh---h---hhCCcEEEeeCceeecCCCCceeEEEEECcHH
Confidence 9975433 111 1 24789999999999988764 4666665543
No 149
>PRK04311 selenocysteine synthase; Provisional
Probab=99.73 E-value=3.6e-16 Score=152.78 Aligned_cols=194 Identities=15% Similarity=0.122 Sum_probs=137.3
Q ss_pred CCChHHHHHHHHHHhcccC-CC--cccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHH
Q 018437 66 TWMEPECDKLVMASINKNY-VD--MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQ 142 (356)
Q Consensus 66 ~~~~~~v~~~i~~~~~~~~-~~--~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~ 142 (356)
++.++.+.+++.+++.... .. ......... ...+.+.+++++|.+. .+++++|+.|+++++.++.
T Consensus 96 s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r-~~~~e~~lA~l~Gae~-------a~vv~sgtaAl~l~l~~l~---- 163 (464)
T PRK04311 96 ALLSEAAIEAVTEAARGYSNLEYDLATGKRGSR-DRALAALLCALTGAED-------ALVVNNNAAAVLLALNALA---- 163 (464)
T ss_pred CCCCHHHHHHHHHHHhcccccccchhhcccchH-HHHHHHHHHHHhCCCe-------EEEECCHHHHHHHHHHHhC----
Confidence 3455788888877765321 01 111122222 2367778999999874 6788888999988775531
Q ss_pred HHHHhcCCCCCCCeEEecCCCcch------HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCc--
Q 018437 143 QKRKEQGKPYDKPNIVTGANVQVC------WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL-- 214 (356)
Q Consensus 143 ~~~~~~g~~~~~~~vi~s~~~h~s------~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~-- 214 (356)
.+++||++..+|+. +...++..|+++++|+.+ ...++++++++|+++|++|++++++|+
T Consensus 164 ----------~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~---~~t~~~dle~aI~~~TklV~~vh~sN~~i 230 (464)
T PRK04311 164 ----------AGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTT---NRTHLRDYEQAINENTALLLKVHTSNYRI 230 (464)
T ss_pred ----------CCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCC---CCCCHHHHHHhcCccCeEEEEEcCCCccc
Confidence 15789999877663 334566779999888764 346899999999999999999999998
Q ss_pred cc--ccCCHHHHHHHHHHhhhccCCCCcEEEecccccccc--cccCCCCccccc---CCCceEEEEcCCcCCCCCcCeeE
Q 018437 215 TG--EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA--PFLYPDLEWDFR---LPLVKSINVSGHKYGLVYAGVGW 287 (356)
Q Consensus 215 tG--~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~--~~~~~~~~~~~~---~~~~Ds~~~~~hK~l~~P~g~g~ 287 (356)
+| ...|+++|+++||++ |+++++|++.|...- .|..+.. ..+. ..++|.+++|+|||+++|. +|+
T Consensus 231 ~G~~~~~dl~eI~~lak~~------gi~vivD~gsG~l~~~~~~gl~~~-p~~~~~l~~GaDiv~fSg~K~LgGp~-~G~ 302 (464)
T PRK04311 231 EGFTKEVSLAELAALGKEH------GLPVVYDLGSGSLVDLSQYGLPDE-PTVQELLAAGVDLVTFSGDKLLGGPQ-AGI 302 (464)
T ss_pred cccCCcCCHHHHHHHHHHc------CCeEEEECCCcccccchhccCCCC-CchhhHHhcCCcEEEecCcccccCCc-eEE
Confidence 34 567999999999999 999999997554210 0100111 1221 3589999999999998885 898
Q ss_pred EEEeC
Q 018437 288 VVWRT 292 (356)
Q Consensus 288 l~~~~ 292 (356)
++.++
T Consensus 303 i~g~~ 307 (464)
T PRK04311 303 IVGKK 307 (464)
T ss_pred EEEcH
Confidence 88764
No 150
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.73 E-value=7e-17 Score=154.82 Aligned_cols=159 Identities=16% Similarity=0.071 Sum_probs=124.9
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~ 169 (356)
.|...++|+ .+++++|.+. .+++++|++|+..++.++..+ +++|+++.+.|.+...
T Consensus 39 ~p~~~~le~----~la~l~g~~~-------a~~~~sG~~Ai~~~l~~l~~~-------------gd~Vl~~~~~y~~~~~ 94 (369)
T cd00614 39 NPTVDALEK----KLAALEGGEA-------ALAFSSGMAAISTVLLALLKA-------------GDHVVASDDLYGGTYR 94 (369)
T ss_pred ChhHHHHHH----HHHHHHCCCC-------EEEEcCHHHHHHHHHHHHcCC-------------CCEEEECCCCcchHHH
Confidence 345555555 4888888764 678888999999999887542 5789999988877543
Q ss_pred ----HHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEec
Q 018437 170 ----FARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (356)
Q Consensus 170 ----~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~ 245 (356)
.+...|++++.++.+ |++++++++++++++|++.+++||+|.+.|+++|.++|+++ |+++++|+
T Consensus 95 ~~~~~~~~~g~~~~~v~~~------d~~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~------g~~livD~ 162 (369)
T cd00614 95 LFERLLPKLGIEVTFVDPD------DPEALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEH------GALLVVDN 162 (369)
T ss_pred HHHHHHhhcCeEEEEeCCC------CHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEEC
Confidence 345678888887653 58899999988899999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeC
Q 018437 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRT 292 (356)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~ 292 (356)
+++.++. .. +. ..++|.++.|.+|+++++.. .|+++.++
T Consensus 163 t~~~~~~--~~---~~---~~g~Divv~S~tK~l~g~~~~~gG~v~~~~ 203 (369)
T cd00614 163 TFATPYL--QR---PL---ELGADIVVHSATKYIGGHSDVIAGVVVGSG 203 (369)
T ss_pred CCcchhc--CC---hh---hhCCcEEEeccceeccCCCCceEEEEEeCc
Confidence 9986543 11 11 23789999999999876542 67777654
No 151
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.73 E-value=8.6e-17 Score=154.43 Aligned_cols=150 Identities=18% Similarity=0.076 Sum_probs=118.8
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~ 169 (356)
.|....+|+. ++++.|... .++++||++|+..++.++.++ +++||++.+.|..+..
T Consensus 60 npt~~~Le~~----iA~le~~~~-------~~~~~sG~~Ai~~~l~all~~-------------GD~Vvv~~~~Y~~t~~ 115 (394)
T PRK09028 60 TPTHFAFQAA----IVELEGGAG-------TALYPSGAAAISNALLSFLKA-------------GDHLLMVDSCYEPTRD 115 (394)
T ss_pred CchHHHHHHH----HHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEECCCcHHHHH
Confidence 4455556554 777777643 689999999999998877543 5799999998866654
Q ss_pred H----HHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEec
Q 018437 170 F----ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (356)
Q Consensus 170 ~----~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~ 245 (356)
. +...|++++.++.+ |.+.++++++++|++|++++|+||+|.+.|+++|+++|+++ |++++||+
T Consensus 116 l~~~~l~~~Gi~v~~v~~~------~~e~l~~~l~~~TklV~lespsNPtg~v~dl~~I~~la~~~------g~~lvvD~ 183 (394)
T PRK09028 116 LCDKILKGFGIETTYYDPM------IGEGIRELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEH------DIVVMLDN 183 (394)
T ss_pred HHHHhhhhcceEEEEECCC------CHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHc------CCEEEEEC
Confidence 3 34568887776532 45789999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCcccccCCCceEEEEcCCcCCCCCc
Q 018437 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA 283 (356)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~ 283 (356)
+|+.++. ..| . ..|+|.+..|.|||++++.
T Consensus 184 t~a~p~~--~~P---l---~~GaDivv~S~tK~l~Gh~ 213 (394)
T PRK09028 184 TWASPIN--SRP---F---EMGVDISIQAATKYIVGHS 213 (394)
T ss_pred Ccccccc--CCc---c---ccCceEEEEeCCeEecCCC
Confidence 9986432 222 2 2489999999999998884
No 152
>PRK06855 aminotransferase; Validated
Probab=99.72 E-value=5.5e-16 Score=151.70 Aligned_cols=210 Identities=9% Similarity=-0.071 Sum_probs=150.3
Q ss_pred CCcccccccCC----CChHHHHHHHHHHhcc-cCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHH
Q 018437 56 PRLNLASFVTT----WMEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAI 130 (356)
Q Consensus 56 ~~~~l~~~~~~----~~~~~v~~~i~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~ 130 (356)
+.+++..+.|. .+++.+.+++.+.+.. ....|....+..++++.+.+++.+.+|++.+. ..+++|+|+++++
T Consensus 33 ~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~---~~I~it~G~~~al 109 (433)
T PRK06855 33 KITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITP---DDIIFFNGLGDAI 109 (433)
T ss_pred cccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCH---hHEEEcCcHHHHH
Confidence 33444444442 3456777777766543 33456666788999999999999988876422 3588999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHH-HhhCCeeEEEEecC-CccccCHHHHHHHHh--hCceEE
Q 018437 131 MLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA-RYFEVELKEVKLEE-GYYVMNPVKAVELVD--ENTICV 206 (356)
Q Consensus 131 ~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~-~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~--~~~~~v 206 (356)
..++. +.++ ++.|++++|+|+.+..+. ...|+.++.+|+++ +++.+|+++|++++. ++++++
T Consensus 110 ~~~~~-l~~~-------------Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i 175 (433)
T PRK06855 110 AKIYG-LLRR-------------EARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGI 175 (433)
T ss_pred HHHHH-hcCC-------------CCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEE
Confidence 88764 3332 578999999998876543 34588888999874 347899999999996 357889
Q ss_pred EEecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc--CCCc-eEEEEcCCcCCC
Q 018437 207 AAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPLV-KSINVSGHKYGL 280 (356)
Q Consensus 207 ~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~-Ds~~~~~hK~l~ 280 (356)
++++|+||||.+-+ +++|.++|+++ ++|+++|.+|+.+... ......+. .+.- -.+..|..|.+.
T Consensus 176 ~l~~P~NPTG~~~s~~~~~~l~~~a~~~------~~~II~De~Y~~l~~~---~~~~~sl~~~~~~~~~I~~~S~SK~~~ 246 (433)
T PRK06855 176 LLINPDNPTGAVYPKEILREIVDIAREY------DLFIICDEIYNNIVYN---GKKTVPLSEVIGDVPGIALKGISKELP 246 (433)
T ss_pred EEECCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccccccC---CCCCCCHHHHcCcCCeEEEecCccccC
Confidence 99999999999955 56788889999 9999999999876431 11111111 1111 244566899874
Q ss_pred -CCcCeeEEEEe
Q 018437 281 -VYAGVGWVVWR 291 (356)
Q Consensus 281 -~P~g~g~l~~~ 291 (356)
....+|+++..
T Consensus 247 ~pGlRiG~ii~p 258 (433)
T PRK06855 247 WPGSRCGWIEVY 258 (433)
T ss_pred CCcceEEEEEEe
Confidence 67899999874
No 153
>PLN02509 cystathionine beta-lyase
Probab=99.72 E-value=9.4e-17 Score=156.90 Aligned_cols=157 Identities=12% Similarity=0.060 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH----H
Q 018437 96 LQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF----A 171 (356)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~----~ 171 (356)
..+++.++++++.|.+. .+++++|+.++..++ .+.++ +++||++.+.|.++... +
T Consensus 134 t~~aLE~~lA~leg~e~-------ai~~~SG~aAi~~il-~ll~~-------------GD~VI~~~~~y~~t~~ll~~~l 192 (464)
T PLN02509 134 TRDALESLLAKLDKADR-------AFCFTSGMAALSAVT-HLIKN-------------GEEIVAGDDVYGGSDRLLSQVV 192 (464)
T ss_pred HHHHHHHHHHHHhCCCE-------EEEeCcHHHHHHHHH-HHhCC-------------CCEEEEcCCchhhHHHHHHHHH
Confidence 45567777999988653 567778887764433 33221 57999999999887643 4
Q ss_pred HhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccccc
Q 018437 172 RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFI 251 (356)
Q Consensus 172 ~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~ 251 (356)
...|++++.++. .|++++++++++++++|++++|+||+|.+.|+++|.++|+++ |+++++|++++.++
T Consensus 193 ~~~G~~v~~vd~------~d~e~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~------g~~lIVD~A~a~~~ 260 (464)
T PLN02509 193 PRSGVVVKRVNT------TNLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKIAEMAHAQ------GALVLVDNSIMSPV 260 (464)
T ss_pred HHCCeEEEEeCC------CCHHHHHHhCCcCCeEEEEECCCCCCCCHHHHHHHHHHHHHc------CCEEEEECCccccc
Confidence 456888887753 268999999999999999999999999999999999999999 99999999987654
Q ss_pred ccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeCC
Q 018437 252 APFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTK 293 (356)
Q Consensus 252 ~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~~ 293 (356)
. .. +. ..++|.++.|.+||+.+|.+ .|+++++++
T Consensus 261 ~--~~---pl---~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~ 296 (464)
T PLN02509 261 L--SR---PL---ELGADIVMHSATKFIAGHSDVMAGVLAVKGE 296 (464)
T ss_pred c--CC---hh---hcCCcEEEecCcccccCCCccceeEEEeccH
Confidence 3 11 11 24799999999999988876 788887654
No 154
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.72 E-value=9.4e-17 Score=154.31 Aligned_cols=156 Identities=13% Similarity=-0.064 Sum_probs=119.8
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHH-hh---
Q 018437 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFAR-YF--- 174 (356)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~-~~--- 174 (356)
++.+.++++.|.+. +++++||++|+..++.++..+ +++|+++.+.|........ +.
T Consensus 55 ~le~~lA~l~g~~~-------v~~~~gg~~Ai~~~l~all~~-------------GD~Vl~~~p~y~~~~~~~~~~~~~~ 114 (382)
T TIGR02080 55 LLQQALAELEGGAG-------AVVTNTGMSAIHLVTTALLGP-------------DDLLVAPHDCYGGTYRLLNALAKKG 114 (382)
T ss_pred HHHHHHHHHhCCCc-------EEEEcCHHHHHHHHHHHHcCC-------------CCEEEEcCCCcHHHHHHHHHHHhhc
Confidence 34445888888542 789999999999998887542 5789999999976443332 22
Q ss_pred CCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccc
Q 018437 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (356)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (356)
|+++..++ ..|++++++++++++++|++++|+||||.+.|+++|.++|+++ ++++++|++|..+..
T Consensus 115 ~~~v~~~d------~~d~~~l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~------g~~vvvD~a~~~~~~-- 180 (382)
T TIGR02080 115 CFRVLFVD------QGDEQALRAALAQKPKLVLIETPSNPLLRVVDIAKICHLAKAV------GAVVVVDNTFLSPAL-- 180 (382)
T ss_pred CeEEEEEC------CCCHHHHHHhcCcCceEEEEECCCCCCCEecCHHHHHHHHHHc------CCEEEEECCCccccc--
Confidence 44554442 1378999999998999999999999999999999999999999 999999999975432
Q ss_pred cCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeCCC
Q 018437 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKD 294 (356)
Q Consensus 255 ~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~~~ 294 (356)
.. +. ..++|.+..|++||++++.+ .|+++.++++
T Consensus 181 ~~---pl---~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~ 216 (382)
T TIGR02080 181 QN---PL---ALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQ 216 (382)
T ss_pred CC---ch---hhCCCEEEeecceeccCCCCceeEEEEeCCHH
Confidence 11 11 13689999999999988776 7877776543
No 155
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.72 E-value=2.6e-16 Score=151.04 Aligned_cols=189 Identities=12% Similarity=0.073 Sum_probs=135.2
Q ss_pred HHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHH-HHHHHHHHHhc
Q 018437 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF-KRKWQQKRKEQ 148 (356)
Q Consensus 70 ~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~-~~~~~~~~~~~ 148 (356)
+...+++.+.+..+... ...+ +.+++.+++++.+|.+. .++|+|||+|+.+++.++ ..
T Consensus 11 ~~e~~a~~~~~~~~~~~-~~g~----~~~~~e~~la~~~g~~~-------~v~~~sgt~aL~~~l~al~~~--------- 69 (376)
T TIGR02379 11 GQELEYIAEAISEGKLS-GDGP----FSRRCETWLENRTGTKK-------ALLTPSCTAALEMAALLLDIQ--------- 69 (376)
T ss_pred HHHHHHHHHHHHcCCcc-CCcH----HHHHHHHHHHHHhCCCe-------EEEeCCHHHHHHHHHHHcCCC---------
Confidence 44466777777644321 1222 33455566888888764 789999999998888765 22
Q ss_pred CCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHH
Q 018437 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLL 228 (356)
Q Consensus 149 g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~ 228 (356)
.+++|+++.++|.++..++...|++++.++++++++.+|+++|++++++++++|+ +++++|...|+++|.++|
T Consensus 70 ----pGd~Viv~~~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d~~~I~~la 142 (376)
T TIGR02379 70 ----PGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITHRTKAIV---PVHYAGVACDMDTIMALA 142 (376)
T ss_pred ----CcCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcCceEEE---EeCCCCCccCHHHHHHHH
Confidence 2579999999999999999999999999999876689999999999999998886 567789999999999999
Q ss_pred HHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCC
Q 018437 229 TKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (356)
Q Consensus 229 ~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~ 296 (356)
+++ ++++++|++|+.+.. ........ ...+.++++.+.|.+.+....|++++.++++.
T Consensus 143 ~~~------~i~vIeDaa~~~g~~--~~~~~~g~--~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~ 200 (376)
T TIGR02379 143 NKH------QLFVIEDAAQGVMST--YKGRALGS--IGHLGTFSFHETKNYTSGGEGGALLINDQAFI 200 (376)
T ss_pred HHC------CCEEEEECccccCCc--cCCcccCC--CCCEEEEeCCCCCcCcccCCceEEEECCHHHH
Confidence 999 999999999986432 11111111 12234444444454543223577777765443
No 156
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.72 E-value=1.5e-16 Score=153.70 Aligned_cols=159 Identities=13% Similarity=0.012 Sum_probs=121.6
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHH-
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE- 168 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~- 168 (356)
.|....+| +.++++.|.+. .+++++|++|+..++.++..+ +++|+++.+.|.+..
T Consensus 63 ~p~~~~le----~~lA~l~g~~~-------~i~~ssG~~Ai~~~l~all~~-------------GD~Vi~~~~~y~~~~~ 118 (398)
T PRK08249 63 NPTVQAFE----EKVRILEGAEA-------ATAFSTGMAAISNTLYTFLKP-------------GDRVVSIKDTYGGTNK 118 (398)
T ss_pred ChHHHHHH----HHHHHHhCCCe-------EEEeCChHHHHHHHHHHhcCC-------------CCEEEEcCCchHHHHH
Confidence 34444454 45899999764 577788899998888776442 579999999998643
Q ss_pred ---HHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEec
Q 018437 169 ---KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (356)
Q Consensus 169 ---~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~ 245 (356)
..+...|++++.++. .|+++++++++++|++|++++|+||+|.+.|+++|.++|+++ ++++++|+
T Consensus 119 ~~~~~~~~~Gi~v~~vd~------~d~e~l~~~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~------gi~livD~ 186 (398)
T PRK08249 119 IFTEFLPRMGVDVTLCET------GDHEQIEAEIAKGCDLLYLETPTNPTLKIVDIERLAAAAKKV------GALVVVDN 186 (398)
T ss_pred HHHHHHhhCCeEEEEcCC------CCHHHHHHhcCCCCeEEEEECCCCCCCccCCHHHHHHHHHHc------CCEEEEEC
Confidence 345567888776653 489999999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeCC
Q 018437 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTK 293 (356)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~~ 293 (356)
+|+.++. .. +. ..++|.++.|.+|+++++.. .|+++ .++
T Consensus 187 t~a~~~~--~~---~l---~~~~Divv~S~sK~l~g~~~~~gG~vv-~~~ 227 (398)
T PRK08249 187 TFATPIN--QN---PL---ALGADLVIHSATKFLSGHADALGGVVC-GSK 227 (398)
T ss_pred CcCcccc--CC---ch---hhCCCEEeccCceecCCCCCceEEEEE-CCH
Confidence 9985432 11 11 23789999999999876542 35554 443
No 157
>PRK09105 putative aminotransferase; Provisional
Probab=99.72 E-value=1.8e-16 Score=152.01 Aligned_cols=191 Identities=18% Similarity=0.064 Sum_probs=139.4
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
++++.+.+++.+..... ..|.. +. ..++++.+++.+|++++ .+++|+|+++++.+++.++.++
T Consensus 56 ~~~~~~~~a~~~~~~~~-~~Y~~-~~----~~~Lr~aia~~~~v~~e-----~I~it~Gs~~ai~~~~~~l~~~------ 118 (370)
T PRK09105 56 GPSPAARDAAARSAALS-GRYDL-EL----EDDLRTLFAAQEGLPAD-----HVMAYAGSSEPLNYAVLAFTSP------ 118 (370)
T ss_pred CCCHHHHHHHHHHHHHh-cCCCC-ch----HHHHHHHHHHHhCcChh-----hEEEcCChHHHHHHHHHHHcCC------
Confidence 34577888877665422 22221 12 33556668888999863 4899999999999998877542
Q ss_pred hcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHH
Q 018437 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHD 226 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~ 226 (356)
+++|++++|+|..+...++..|++++.+|.+++ +.+|++++++. .+++++|++++|+||||.+.+.++|.+
T Consensus 119 -------gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~l~~ 189 (370)
T PRK09105 119 -------TAGLVTADPTYEAGWRAADAQGAPVAKVPLRAD-GAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRADIEW 189 (370)
T ss_pred -------CCEEEEeCCChHHHHHHHHHcCCeEEEecCCCC-CCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHHHHH
Confidence 578999999999999999999999999999764 88999999887 467889999999999999999999998
Q ss_pred HHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEE-cCCcCCC-CCcCeeEEEEe
Q 018437 227 LLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINV-SGHKYGL-VYAGVGWVVWR 291 (356)
Q Consensus 227 i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~-~~hK~l~-~P~g~g~l~~~ 291 (356)
+++.+.+ ++++++|++|..+.. .+ ...++.....+.+++ +..|.++ ....+|+++..
T Consensus 190 l~~~~~~----~~~lIvDEaY~~f~~---~~-s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~ 248 (370)
T PRK09105 190 LLANKPA----GSVLLVDEAYIHFSD---AP-SVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAAR 248 (370)
T ss_pred HHHhCCC----CcEEEEECchHHhcc---Cc-chHHHHhhCCCEEEEecccHhhcCCccceeeeecC
Confidence 8875421 799999999965321 01 111221123455555 5667753 44569999864
No 158
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.72 E-value=6.8e-16 Score=150.47 Aligned_cols=195 Identities=16% Similarity=0.109 Sum_probs=137.5
Q ss_pred CCChHHHHHHHHHHhcccC--C-CcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHH
Q 018437 66 TWMEPECDKLVMASINKNY--V-DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQ 142 (356)
Q Consensus 66 ~~~~~~v~~~i~~~~~~~~--~-~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~ 142 (356)
++.++.+.+++.+++.... . ........ .....+.+.+++++|.+. .+++++|+.|+++++.++.
T Consensus 91 s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g-~r~~~le~~lA~l~gae~-------alvv~sg~aAi~l~l~~l~---- 158 (454)
T TIGR00474 91 APLAEEAIEAVTDAARGYSNLEYDLETGKRG-SRYSHVEGLLCELTGAED-------ALVVNNNAAAVLLALNTLA---- 158 (454)
T ss_pred CCCCHHHHHHHHHHHhcccchhccccccccc-hHHHHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHhC----
Confidence 3456788888887775321 0 11111112 223567788999999975 4667788889888775431
Q ss_pred HHHHhcCCCCCCCeEEecCCCcc------hHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcc-
Q 018437 143 QKRKEQGKPYDKPNIVTGANVQV------CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT- 215 (356)
Q Consensus 143 ~~~~~~g~~~~~~~vi~s~~~h~------s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t- 215 (356)
.+++||++...|. ++...++..|++++.++.+ ...|+++++++|+++|++|++++++|++
T Consensus 159 ----------~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~---~~~~l~dle~aI~~~T~lv~~~h~sN~~~ 225 (454)
T TIGR00474 159 ----------KGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTT---NRTHLKDYEDAITENTALLLKVHTSNYRI 225 (454)
T ss_pred ----------CcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCC---CCCCHHHHHHhcCcCCEEEEEEccCcccc
Confidence 1578999987763 2344566779999888764 3468999999999999999999999984
Q ss_pred -c--ccCCHHHHHHHHHHhhhccCCCCcEEEecccccccc--cccCCCCcc--cccCCCceEEEEcCCcCCCCCcCeeEE
Q 018437 216 -G--EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA--PFLYPDLEW--DFRLPLVKSINVSGHKYGLVYAGVGWV 288 (356)
Q Consensus 216 -G--~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~--~~~~~~~~~--~~~~~~~Ds~~~~~hK~l~~P~g~g~l 288 (356)
| .+.|+++|+++||++ |+++++|++.|...- +|-.+..+. +....++|.+++|+|||+++|. .|++
T Consensus 226 ~G~~~~~dl~~I~~la~~~------g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~-~G~i 298 (454)
T TIGR00474 226 VGFTEEVSIAELVALGREH------GLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQ-AGII 298 (454)
T ss_pred cCCCCCCCHHHHHHHHHHc------CCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCe-EEEE
Confidence 5 478999999999999 999999987553210 010011111 2224589999999999998885 7988
Q ss_pred EEeC
Q 018437 289 VWRT 292 (356)
Q Consensus 289 ~~~~ 292 (356)
+.++
T Consensus 299 ~g~~ 302 (454)
T TIGR00474 299 VGKK 302 (454)
T ss_pred EECH
Confidence 8765
No 159
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.72 E-value=5.4e-16 Score=150.85 Aligned_cols=220 Identities=15% Similarity=0.086 Sum_probs=146.7
Q ss_pred HHHHHHHHHHhhhcCCCCcccccccCCCChHHHHHHHHHHh-cccCCCcc------cCcchHHHHHHHHHHHHHHhCCCC
Q 018437 40 EAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASI-NKNYVDMD------EYPVTTELQNRCVNMIAHLFNTPV 112 (356)
Q Consensus 40 ~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~i~~~~-~~~~~~~~------~~~~~~~le~~~~~~la~l~g~~~ 112 (356)
.+|.+.+++..... ...+|+.. ..+..+|.+.+++.+.+ +.....+. ..+...++|+.+++.+++++|.+.
T Consensus 14 ~~~~~~~~~~~~~~-~~~~~l~~-sen~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~ 91 (416)
T PRK13034 14 DEVFAAINKELERQ-QDHLELIA-SENFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDY 91 (416)
T ss_pred HHHHHHHHHHHHHH-hcCeeecc-cccCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCc
Confidence 55666666555433 22333322 12245688888887774 43222111 135567788767779999999874
Q ss_pred CCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch-HHHHHHh--hCCee--EEEEecCCc
Q 018437 113 ADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC-WEKFARY--FEVEL--KEVKLEEGY 187 (356)
Q Consensus 113 ~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s-~~~~~~~--~G~~v--~~v~~~~~~ 187 (356)
..+++++|+.||..++.++..+ +++|+++...|.+ +...++. .+... +.++++..+
T Consensus 92 ------alv~~~SG~~A~~~~l~al~~~-------------GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 152 (416)
T PRK13034 92 ------ANVQPHSGSQANGAVYLALLKP-------------GDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLT 152 (416)
T ss_pred ------eEEecCCcHHHHHHHHHHhcCC-------------CCEEEEcCccceeeeecCCcceeccceeeeEEccccccc
Confidence 2345678899999999887543 6799999999977 2222221 12222 345555445
Q ss_pred cccCHHHHHHHHhh-CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCC
Q 018437 188 YVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLP 266 (356)
Q Consensus 188 ~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 266 (356)
+.+|+++|++.+.. ++++|++..+ .+|...|+++|.++|+++ ++++++|+|++.++.. .+..... ..
T Consensus 153 ~~~d~~~le~~l~~~~~klVi~~~~--~~g~~~dl~~l~~la~~~------g~~livD~Aha~G~~~--~g~~~~~--~~ 220 (416)
T PRK13034 153 GLIDYDEVEELAKEHKPKLIIAGFS--AYPRELDFARFREIADEV------GALLMVDMAHIAGLVA--AGEHPNP--FP 220 (416)
T ss_pred CCcCHHHHHHHHhhcCCeEEEECCC--ccccccCHHHHHHHHHHc------CCEEEEeCcccccCcc--cCCCCCC--CC
Confidence 78999999999854 6777765443 357888999999999999 9999999999876652 2221111 24
Q ss_pred CceEEEEcCCcCCCCCcCeeEEEEeCC
Q 018437 267 LVKSINVSGHKYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 267 ~~Ds~~~~~hK~l~~P~g~g~l~~~~~ 293 (356)
.+|.++.++||++.+|.| |+++.+++
T Consensus 221 ~~Di~~~s~~K~l~g~~G-G~v~~~~~ 246 (416)
T PRK13034 221 HAHVVTTTTHKTLRGPRG-GMILTNDE 246 (416)
T ss_pred CceEEEEeCcccCCCCCC-eEEEECcH
Confidence 699999999999988887 55555443
No 160
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.72 E-value=5.6e-16 Score=150.34 Aligned_cols=210 Identities=14% Similarity=0.048 Sum_probs=151.9
Q ss_pred cccccccCCCC-hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 58 LNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 58 ~~l~~~~~~~~-~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
+++..+.+..+ ++.+.+++.+.+......|....+..++++++.+++++.+|.+... ..+++|+|+++|+..++.+
T Consensus 36 i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~---~~i~~t~G~~~al~~~~~~ 112 (402)
T PRK06107 36 VDLTVGEPDFDTPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYAD---NEITVGGGAKQAIFLALMA 112 (402)
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh---hhEEEeCCHHHHHHHHHHH
Confidence 45555555433 4677888877775444456555688899999999999998986422 3589999999999998876
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEEecCCCcc
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLT 215 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (356)
+..+ ++.|+++.++|..+...+...|..++.+++++ +++.+|+++|++++.+++++|++++|+|||
T Consensus 113 ~~~~-------------gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPt 179 (402)
T PRK06107 113 TLEA-------------GDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPT 179 (402)
T ss_pred hcCC-------------CCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCC
Confidence 5432 57899999999888888888888888888863 347899999999998889999999999999
Q ss_pred cccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc--CCC--ceEE-EEcCCcCCC-CCcCee
Q 018437 216 GEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPL--VKSI-NVSGHKYGL-VYAGVG 286 (356)
Q Consensus 216 G~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~--~Ds~-~~~~hK~l~-~P~g~g 286 (356)
|.+.+ +++|+++|++++ ++++++|.+|+.+.. .+.....+. .+. -..+ ..|.+|.++ ....+|
T Consensus 180 G~~~s~~~~~~l~~~a~~~~-----~~~iI~De~y~~l~~---~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG 251 (402)
T PRK06107 180 GAVYSRAELRALADVLLRHP-----HVLVLTDDIYDHIRF---DDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIG 251 (402)
T ss_pred CcCcCHHHHHHHHHHHHHcC-----CeEEEEehhcccccc---CCCCCCCHHHhCcCccCCEEEEeccchhhcCccccee
Confidence 98865 566777788841 799999999986432 111111111 111 1233 445799874 445679
Q ss_pred EEEEe
Q 018437 287 WVVWR 291 (356)
Q Consensus 287 ~l~~~ 291 (356)
+++..
T Consensus 252 ~~~~~ 256 (402)
T PRK06107 252 YAAGP 256 (402)
T ss_pred eeecC
Confidence 88753
No 161
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.72 E-value=2e-15 Score=156.06 Aligned_cols=301 Identities=10% Similarity=0.004 Sum_probs=197.6
Q ss_pred ccccccccc-hhhhhcCC-CCCCCCCCCCHHHHHHHHHHHhhhcCCCCcccc-cccCCCChHHHHHHHHH---Hhcc-cC
Q 018437 12 EILSSTFAS-RYVRAAIP-RFKMPDNSMPKEAAYQVINDELMLDGNPRLNLA-SFVTTWMEPECDKLVMA---SINK-NY 84 (356)
Q Consensus 12 ~~~~~~~~~-~~~~~~~~-~~~lp~~~~~~~~i~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~v~~~i~~---~~~~-~~ 84 (356)
++|+++|.. .|..-.+. ...+|+ ++++.+++++++++..++......++ +|.+...++.+.+.+.+ ++.. .+
T Consensus 20 ~s~d~l~~~~iP~~i~~~~~l~lp~-~~sE~e~~~~~~~la~~N~~~~~fig~G~y~~~~p~~i~r~v~~~p~~~TaytP 98 (939)
T TIGR00461 20 SDLNALIEQLVPPNILKRRPLQLEA-PSKEYEALAHLKKIASKNHKFKSYIGMGYYGTILPPVIQRNLLENPGWYTAYTP 98 (939)
T ss_pred CCHHHHhhccCCHHHhcCCCCCCCC-CCCHHHHHHHHHHHHhcCCCccccCCCCcCCCcCChHHHHHHHhCchhhhcCCC
Confidence 578889988 67655554 356766 57999999999988776543321122 22333445666644432 2332 46
Q ss_pred CCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCc
Q 018437 85 VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ 164 (356)
Q Consensus 85 ~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h 164 (356)
++++.+++..+...+.+.++++|+|++.. ...+..++|.+....+++.+... .++.+|++++..|
T Consensus 99 yQ~EisQG~Le~l~e~Qt~i~eLtGm~~a-----NaSl~d~atA~aEa~~~a~~~~~----------~~~~~vlv~~~~h 163 (939)
T TIGR00461 99 YQPEISQGRLEALLNFQTVVSDLTGLPVA-----NASLLDEGTAAAEAMALSFNVSK----------KKANKFFVAKDLH 163 (939)
T ss_pred CChhhhhHHHHHHHHHHHHHHHHHCCChh-----hhhccchhhHHHHHHHHHHHhhc----------CCCCEEEECCCCC
Confidence 66777889999999999999999999962 24566677766554444443210 0136899999999
Q ss_pred chHHHHH----HhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCc
Q 018437 165 VCWEKFA----RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTP 240 (356)
Q Consensus 165 ~s~~~~~----~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~ 240 (356)
+.....+ +..|++++.++. ++|++.+ ++.++++++|++. |.+.|+++|.+++|++ |.+
T Consensus 164 P~~~~v~~t~a~~~g~~v~~~~~---------~~l~~~~--~~~~v~~q~Pn~~-G~ied~~~i~~~~h~~------gal 225 (939)
T TIGR00461 164 PQTKSVLHTRAKPFGIEVIVVDC---------SDIKKAV--DVFGCLLQYPATD-GSILDYKQLIDALHSH------KSL 225 (939)
T ss_pred cchHHHHHHHHHhcCcEEEEEcH---------HHHhhcC--CEEEEEEECCCCC-eEEecHHHHHHHHHHc------CCE
Confidence 9866444 467888887743 3466655 5778888888766 9999999999999999 999
Q ss_pred EEEecccccccccccCCCCcccccCCCceEEEEcCCcCCC----CCcCeeEEEEeCCCCCccccccc-------c----C
Q 018437 241 IHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL----VYAGVGWVVWRTKDDLPDELVFH-------I----N 305 (356)
Q Consensus 241 l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~----~P~g~g~l~~~~~~~~~~~~~~~-------~----~ 305 (356)
+++++-.-.... ...+- ..|+|.++-+.++|+. +.++.|++.++++ + .+.++.. . .
T Consensus 226 ~~~~ad~~al~l----l~~Pg---e~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~-l-~r~lPgrivG~s~D~~G~~~ 296 (939)
T TIGR00461 226 VSVAADLMALTL----LTPPG---HYGADIVLGSSQRFGVPMGYGGPHAAFFAVKDE-Y-NRKMPGRIVGVSKDALGNTA 296 (939)
T ss_pred EEEEechHHhCC----cCCHH---HcCCcEEeeCCCccCCCCCCCCCceeeeeecHh-h-HhhCCCCceeEEecCCCCcc
Confidence 999654433222 11122 2389999666666632 2345899999864 2 1222110 0 0
Q ss_pred C---CCCC-C-----CCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 306 Y---LGSD-Q-----PTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 306 ~---~~~~-~-----~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
| ++.. + .-.+-.||-++..++....++..+|.+|++++.++...+|+||+
T Consensus 297 ~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~ 355 (939)
T TIGR00461 297 LRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILA 355 (939)
T ss_pred ceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Confidence 0 0000 0 00011266666666667788999999999999999999998875
No 162
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.72 E-value=1.2e-15 Score=148.14 Aligned_cols=208 Identities=13% Similarity=-0.027 Sum_probs=149.3
Q ss_pred cccccccCCCC-hHHHHHHHHHHhcc-cCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCC-CeEEeCChhHHHHHHH
Q 018437 58 LNLASFVTTWM-EPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTA-VGVGTVGSSEAIMLAG 134 (356)
Q Consensus 58 ~~l~~~~~~~~-~~~v~~~i~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~-~~~~t~Ggt~a~~~al 134 (356)
++|..+.+... ++.+.+.+...... ....|....+...+++.+.+++.+.+|++.+. . .+++|+|+++++.+++
T Consensus 36 ~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~---~~~I~it~G~~~al~~~~ 112 (403)
T PRK08636 36 IDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDP---ETEVVATMGSKEGYVHLV 112 (403)
T ss_pred EEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC---CCeEEECCChHHHHHHHH
Confidence 44554444432 34455555444432 23445556688899999999999988876421 2 4889999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHH----HHHHh---hCceEE
Q 018437 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKA----VELVD---ENTICV 206 (356)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L----~~~i~---~~~~~v 206 (356)
.++.++ ++.|++++|+|+.+...++..|++++.||++. +++.+|++.| +++++ .+++++
T Consensus 113 ~~l~~~-------------gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i 179 (403)
T PRK08636 113 QAITNP-------------GDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYV 179 (403)
T ss_pred HHhCCC-------------CCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEE
Confidence 887653 57999999999999999999999999999853 3478998754 55554 367899
Q ss_pred EEecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCC---ceEEEEcCCcCC
Q 018437 207 AAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPL---VKSINVSGHKYG 279 (356)
Q Consensus 207 ~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~---~Ds~~~~~hK~l 279 (356)
++++|+||||.+-+ +++|.++|++| ++++++|.+|+.+... +.....+. ++. ....+.|+.|.+
T Consensus 180 ~~~~P~NPTG~~~s~~~~~~l~~~a~~~------~~~II~De~Y~~l~~~---~~~~~~~~~~~~~~~~~i~~~S~SK~~ 250 (403)
T PRK08636 180 VVNFPHNPTTATVEKSFYERLVALAKKE------RFYIISDIAYADITFD---GYKTPSILEVEGAKDVAVESYTLSKSY 250 (403)
T ss_pred EEeCCCCCCCccCCHHHHHHHHHHHHHc------CcEEEEeccchhhccC---CCCCCChhcCCCccccEEEEEeccccc
Confidence 99999999999854 57788899999 9999999999875431 11001111 111 222345789987
Q ss_pred -CCCcCeeEEEE
Q 018437 280 -LVYAGVGWVVW 290 (356)
Q Consensus 280 -~~P~g~g~l~~ 290 (356)
.....+|+++.
T Consensus 251 ~~~GlRiG~iv~ 262 (403)
T PRK08636 251 NMAGWRVGFVVG 262 (403)
T ss_pred CCccceeeeeeC
Confidence 56688999875
No 163
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.71 E-value=1.6e-16 Score=153.25 Aligned_cols=157 Identities=18% Similarity=0.142 Sum_probs=123.5
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch---
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC--- 166 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s--- 166 (356)
.|...++|+. +++++|.+. .+++++|+.|+..++.++..+ +++|+++.+.|.+
T Consensus 58 ~p~~~~le~~----lA~l~g~~~-------av~~~sG~~Ai~~~l~al~~~-------------Gd~Vi~~~~~y~~t~~ 113 (391)
T TIGR01328 58 NPTVSNLEGR----IAFLEGTEA-------AVATSSGMGAIAATLLTILKA-------------GDHLISDECLYGCTFA 113 (391)
T ss_pred CchHHHHHHH----HHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEecCcchHHHH
Confidence 3455556554 899999874 678888999998888776432 5789999987653
Q ss_pred -HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEec
Q 018437 167 -WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (356)
Q Consensus 167 -~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~ 245 (356)
+...+...|++++.++++ |++++++++++++++|++++|+||+|.+.|+++|.++|+++ ++++++|+
T Consensus 114 ~~~~~~~~~G~~~~~vd~~------d~e~l~~~i~~~tklV~le~p~Np~G~v~dl~~I~~la~~~------gi~livD~ 181 (391)
T TIGR01328 114 LLEHALTKFGIQVDFINMA------IPEEVKAHIKDNTKIVYFETPANPTMKLIDMERVCRDAHSQ------GVKVIVDN 181 (391)
T ss_pred HHHHHHhcCCeEEEEECCC------CHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEEC
Confidence 445566678888888764 78999999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEE
Q 018437 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVW 290 (356)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~ 290 (356)
+|+.+.. .. +. ..++|.++.|++|+++++.+ .|+++.
T Consensus 182 a~a~~~~--~~---~~---~~g~Divv~S~sK~lgg~g~~~gG~v~~ 220 (391)
T TIGR01328 182 TFATPML--TN---PV---ALGVDVVVHSATKYIGGHGDVVAGLICG 220 (391)
T ss_pred CCchhcc--CC---ch---hcCCCEEEccccccccCCCCceEEEEEc
Confidence 9975433 11 11 24789999999999977654 466544
No 164
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.71 E-value=1.3e-15 Score=147.50 Aligned_cols=210 Identities=16% Similarity=0.077 Sum_probs=147.3
Q ss_pred cccccccCCC-ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 58 LNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 58 ~~l~~~~~~~-~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
++|..+.++. +++.+.+++.+... ....|....+..++++++.+++.+ .|...+ ...+++|+|+++++.+++.+
T Consensus 33 i~l~~~~~~~~~~~~~~~a~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~-~~~~~~---~~~i~~t~G~~~al~~~~~~ 107 (397)
T PRK07568 33 YHLNIGQPDIKTPEVFFEAIKNYDE-EVLAYSHSQGIPELREAFAKYYKK-WGIDVE---PDEILITNGGSEAILFAMMA 107 (397)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHhc-CCcCcCCCCCCHHHHHHHHHHHHH-hCCCCC---cceEEEcCChHHHHHHHHHH
Confidence 3454544543 45677787766543 333444555777888887777763 444321 13488999999999988877
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-Cccc-cCHHHHHHHHhhCceEEEEecCCCc
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYV-MNPVKAVELVDENTICVAAILGSTL 214 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~-~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (356)
+.++ +++|+++.+.|..+...++..|++++.++++. +++. .|+++|++++++++++|++++|+||
T Consensus 108 l~~~-------------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~p~NP 174 (397)
T PRK07568 108 ICDP-------------GDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNPGNP 174 (397)
T ss_pred hcCC-------------CCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCccceEEEEECCCCC
Confidence 6432 57899999999888888889999999999863 2234 3689999999888999999999999
Q ss_pred ccccC---CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCC--ccccc-CCCceEEEEcCCcCCC-CCcCeeE
Q 018437 215 TGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL--EWDFR-LPLVKSINVSGHKYGL-VYAGVGW 287 (356)
Q Consensus 215 tG~~~---~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~--~~~~~-~~~~Ds~~~~~hK~l~-~P~g~g~ 287 (356)
||.+. ++++|.++|+++ ++++++|++|+.+... .... ...+. ...--.+.-|.+|.++ ....+|+
T Consensus 175 tG~~~~~~~~~~i~~~~~~~------~~~ii~De~y~~~~~~--~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~ 246 (397)
T PRK07568 175 TGVVYTKEELEMLAEIAKKH------DLFLISDEVYREFVYD--GLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGC 246 (397)
T ss_pred CCccCCHHHHHHHHHHHHHC------CcEEEEeccchhcccC--CCCccChhhcCCCcCCEEEEecchhhccCCCcceEE
Confidence 99986 478899999999 9999999999875431 1100 01111 0111234457899875 3578999
Q ss_pred EEEeCC
Q 018437 288 VVWRTK 293 (356)
Q Consensus 288 l~~~~~ 293 (356)
++..++
T Consensus 247 ~~~~~~ 252 (397)
T PRK07568 247 LISKNK 252 (397)
T ss_pred EecCCH
Confidence 887543
No 165
>PRK09148 aminotransferase; Validated
Probab=99.71 E-value=1.7e-15 Score=147.02 Aligned_cols=213 Identities=15% Similarity=-0.017 Sum_probs=149.5
Q ss_pred CCCCcccccccCCC-ChHHHHHHHHHHhccc-CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHH
Q 018437 54 GNPRLNLASFVTTW-MEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIM 131 (356)
Q Consensus 54 ~~~~~~l~~~~~~~-~~~~v~~~i~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~ 131 (356)
+...++|..+.+.. +++.+.+.+.+.+... ...|....+..++++.+.+++.+.+|.+.+. ...+++|+|+++++.
T Consensus 29 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~--~~~I~it~G~~~al~ 106 (405)
T PRK09148 29 GADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNP--DTQVVATLGSKEGFA 106 (405)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCcEEEcCChHHHHH
Confidence 34444555555543 3456666676665422 2345555678899999999998887875321 114899999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCC-ccccCHHHHHHHHhhCceEEEEec
Q 018437 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDENTICVAAIL 210 (356)
Q Consensus 132 ~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~~~~~v~~~~ 210 (356)
.++.++.++ ++.|+++.|+|..+...+...|++++.+|++.+ .+..+++++.+...+++++|++++
T Consensus 107 ~~~~~l~~~-------------gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~ 173 (405)
T PRK09148 107 NMAQAITAP-------------GDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNY 173 (405)
T ss_pred HHHHHhcCC-------------CCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeC
Confidence 998887543 578999999999999999999999999999753 244455444444446789999999
Q ss_pred CCCcccccCCH---HHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-C---CCceEEEEcCCcCCC-CC
Q 018437 211 GSTLTGEFEDV---KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-L---PLVKSINVSGHKYGL-VY 282 (356)
Q Consensus 211 ~~~~tG~~~~i---~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~---~~~Ds~~~~~hK~l~-~P 282 (356)
|+||||.+-+. ++|.++|+++ ++++++|++|+.+..+ ......+. . .....+.-|+.|.++ ..
T Consensus 174 P~NPtG~~~s~~~l~~l~~~a~~~------~~~ii~De~Y~~~~~~---~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pG 244 (405)
T PRK09148 174 PSNPTAYVADLDFYKDVVAFAKKH------DIIILSDLAYSEIYFD---GNPPPSVLQVPGAKDVTVEFTSMSKTFSMAG 244 (405)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHc------CeEEEEeccchhhhcC---CCCCCChhhCCCccCcEEEEeccccccCCcc
Confidence 99999999765 6788899999 9999999999875431 11111111 1 122334677899875 44
Q ss_pred cCeeEEEE
Q 018437 283 AGVGWVVW 290 (356)
Q Consensus 283 ~g~g~l~~ 290 (356)
..+|+++.
T Consensus 245 lR~G~~v~ 252 (405)
T PRK09148 245 WRMGFAVG 252 (405)
T ss_pred hheeeeeC
Confidence 67999975
No 166
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.71 E-value=3.2e-16 Score=151.57 Aligned_cols=159 Identities=14% Similarity=0.032 Sum_probs=123.8
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCc----c
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ----V 165 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h----~ 165 (356)
.|....+|+. ++++.|.+. .+++++|+.|+..++.++..+ +++|+++...| .
T Consensus 69 ~p~~~~le~~----lA~l~g~~~-------al~~~sG~~Ai~~~l~all~~-------------Gd~Vl~~~~~~~~t~~ 124 (403)
T PRK07810 69 NPTVSMFEER----LRLIEGAEA-------CFATASGMSAVFTALGALLGA-------------GDRLVAARSLFGSCFV 124 (403)
T ss_pred CchHHHHHHH----HHHHhCCCc-------EEEECChHHHHHHHHHHHhCC-------------CCEEEEccCCcchHHH
Confidence 3455555554 899999764 788899999999888776432 57899887555 3
Q ss_pred hHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEec
Q 018437 166 CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (356)
Q Consensus 166 s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~ 245 (356)
.+...++..|+++++++.+ |++++++++++++++|++.+|+||+|.+.|+++|.++|+++ ++++++|+
T Consensus 125 ~~~~~~~~~G~~v~~vd~~------d~~~l~~ai~~~tklV~~esp~Nptg~v~dl~~I~~la~~~------g~~vivD~ 192 (403)
T PRK07810 125 VCNEILPRWGVETVFVDGE------DLSQWEEALSVPTQAVFFETPSNPMQSLVDIAAVSELAHAA------GAKVVLDN 192 (403)
T ss_pred HHHHHHHHcCcEEEEECCC------CHHHHHHhcCcCceEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEEC
Confidence 3456667789999988642 88999999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeC
Q 018437 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRT 292 (356)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~ 292 (356)
+|+.++. .. +. ..++|.++.|.||+++++.. .|+++.++
T Consensus 193 a~a~~~~--~~---~~---~~gaDivv~S~tK~l~g~g~~~gG~v~~~~ 233 (403)
T PRK07810 193 VFATPLL--QR---GL---PLGADVVVYSGTKHIDGQGRVLGGAILGDR 233 (403)
T ss_pred CCCcccc--CC---hh---hcCCcEEEccCCceecCCcCceeEEEEeCh
Confidence 9975433 11 11 23789999999999866432 57776543
No 167
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.71 E-value=1.1e-16 Score=153.30 Aligned_cols=160 Identities=17% Similarity=0.059 Sum_probs=126.5
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~ 169 (356)
.|....+|+. ++++-|.+. .+++++|+.|+..++.++.++ +++||++...|.....
T Consensus 61 nPt~~~le~~----la~LEg~~~-------a~~~~SGmaAi~~~~~~ll~~-------------GD~Vv~~~~~Yg~t~~ 116 (395)
T PRK08114 61 TLTHFSLQEA----MCELEGGAG-------CALYPCGAAAVANAILAFVEQ-------------GDHVLMTGTAYEPTQD 116 (395)
T ss_pred ChhHHHHHHH----HHHHhCCCe-------EEEEhHHHHHHHHHHHHHcCC-------------CCEEEEeCCCcHHHHH
Confidence 4666667665 888888764 677888999999988877542 5789999888866554
Q ss_pred HH----HhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEec
Q 018437 170 FA----RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (356)
Q Consensus 170 ~~----~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~ 245 (356)
.+ +..|+++++++. .|.++++++++++|++|++.+++||+|.+.||++|+++||++.. +++++||+
T Consensus 117 l~~~~l~~~Gi~v~~vd~------~d~~~l~~~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~----g~~lvVDn 186 (395)
T PRK08114 117 FCSKILSKLGVTTTWFDP------LIGADIAKLIQPNTKVVFLESPGSITMEVHDVPAIVAAVRSVNP----DAVIMIDN 186 (395)
T ss_pred HHHHHHHhcCcEEEEECC------CCHHHHHHhcCCCceEEEEECCCCCCCEeecHHHHHHHHHHhCC----CCEEEEEC
Confidence 44 556999888764 26788999999999999999999999999999999999999810 39999999
Q ss_pred ccccccccccCCCCcccccCCCceEEEEcCCcCCCCCc--CeeEEEEe
Q 018437 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA--GVGWVVWR 291 (356)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~--g~g~l~~~ 291 (356)
+++.++. + +....|+|.+..|.|||++++. +.|+++.+
T Consensus 187 T~a~p~~--~------~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~ 226 (395)
T PRK08114 187 TWAAGVL--F------KALDFGIDISIQAGTKYLVGHSDAMIGTAVAN 226 (395)
T ss_pred CCccccc--c------CHHHcCCcEEEEcCcccccCCCcceeEEEEcC
Confidence 9986443 1 2223489999999999999995 77866543
No 168
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.71 E-value=7.5e-16 Score=146.68 Aligned_cols=190 Identities=13% Similarity=-0.017 Sum_probs=133.8
Q ss_pred ChHHHHHHHHHHhcccCCCcc---cCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q 018437 68 MEPECDKLVMASINKNYVDMD---EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~---~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (356)
.++.+.+++.+++......+. ...+...+..++++.+++++|.+. .+++++|++++..++.++..+
T Consensus 31 ~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~-------~i~~~~G~~~~~~~l~~~~~~---- 99 (360)
T TIGR00858 31 SHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGTEA-------ALLFSSGYLANVGVISALVGK---- 99 (360)
T ss_pred CCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCC-------EEEECchHHHHHHHHHHhCCC----
Confidence 347788888877754222211 112334556677888999888542 455555678877766655321
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh----CceEEEEecCCCcccccCC
Q 018437 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NTICVAAILGSTLTGEFED 220 (356)
Q Consensus 145 ~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~----~~~~v~~~~~~~~tG~~~~ 220 (356)
+++|+++.++|.++...++..|++++.++. +|++.|++.+++ ++++|++.+++|++|.+.|
T Consensus 100 ---------gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~------~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~ 164 (360)
T TIGR00858 100 ---------GDLILSDALNHASLIDGCRLSGARVRRYRH------NDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAP 164 (360)
T ss_pred ---------CCEEEEEccccHHHHHHHHhcCCceEEecC------CCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcC
Confidence 578999999999999999999999887763 478899998864 4678888889999999999
Q ss_pred HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCC-C-cccccCCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD-L-EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 221 i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~-~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
+++|.++|+++ ++++++|++|+.+..+..... . ...+...+.|.+..+++|+++ +.| |+++.+
T Consensus 165 ~~~i~~l~~~~------~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~g-G~~~~~ 229 (360)
T TIGR00858 165 LPQLVALAERY------GAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALG-SYG-AYVAGS 229 (360)
T ss_pred HHHHHHHHHHc------CcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhh-ccC-cEEEcC
Confidence 99999999999 999999999975443211000 0 011211356788889999874 555 777653
No 169
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.70 E-value=2.9e-16 Score=152.01 Aligned_cols=159 Identities=16% Similarity=0.120 Sum_probs=123.1
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch---
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC--- 166 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s--- 166 (356)
.|....+| +.++++.|.+. .+++++|+.|+.+++.++..+ +++|+++.+.|..
T Consensus 64 ~p~~~~le----~~lA~l~g~~~-------~i~~~sG~~Al~~~l~~ll~~-------------Gd~Viv~~~~y~~t~~ 119 (403)
T PRK07503 64 NPTLALLE----QRMASLEGGEA-------AVALASGMGAITATLWTLLRP-------------GDEVIVDQTLYGCTFA 119 (403)
T ss_pred CchHHHHH----HHHHHHhCCCc-------EEEEcCHHHHHHHHHHHHcCC-------------CCEEEEccCccchHHH
Confidence 34455555 45899999864 577888899988888765332 5789999887754
Q ss_pred -HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEec
Q 018437 167 -WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (356)
Q Consensus 167 -~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~ 245 (356)
+...+...|++++.++++ |+++|+++++++|++|++.+|+||+|.+.|+++|.++|+++ |+++++|+
T Consensus 120 ~~~~~~~~~G~~v~~vd~~------d~~~l~~~i~~~tklV~le~p~NPtG~~~di~~I~~la~~~------gi~lIvD~ 187 (403)
T PRK07503 120 FLHHGLGEFGVTVRHVDLT------DPAALKAAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGA------GAKVVVDN 187 (403)
T ss_pred HHHHHHhhCCEEEEEeCCC------CHHHHHHhcCccCcEEEEeCCCCCCCeeeCHHHHHHHHHHc------CCEEEEEC
Confidence 334556678888888763 68999999998999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeCC
Q 018437 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTK 293 (356)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~~ 293 (356)
+|+.+.. . .+.. .++|.++.|.+|+++++.+ .|+++ .++
T Consensus 188 a~a~~~~---~--~~l~---~g~Di~v~S~tK~l~g~gd~~gG~v~-~~~ 228 (403)
T PRK07503 188 TYCTPYL---Q--RPLE---LGADLVVHSATKYLGGHGDITAGLVV-GGK 228 (403)
T ss_pred CCccccc---C--Cchh---hCCCEEEccccccccCCCceeEEEEE-cCH
Confidence 9975432 1 1121 3789999999999976644 67776 443
No 170
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.70 E-value=8.1e-16 Score=148.20 Aligned_cols=202 Identities=14% Similarity=0.019 Sum_probs=141.9
Q ss_pred CCCCccccccc-CCC-ChHHHHHHHHHHhccc---CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhH
Q 018437 54 GNPRLNLASFV-TTW-MEPECDKLVMASINKN---YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (356)
Q Consensus 54 ~~~~~~l~~~~-~~~-~~~~v~~~i~~~~~~~---~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~ 128 (356)
|+..+++.+.. +.. ++|.+.+++.+.+... ...+....+...+.+++.+++++++|.+. ..++| +|++
T Consensus 32 g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~~~------~i~~~-sG~~ 104 (385)
T TIGR01825 32 GKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKTEA------ALVFQ-SGFN 104 (385)
T ss_pred CceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCCCc------EEEEC-cHHH
Confidence 33334444432 233 4577888877776542 22333455778889999999999999653 24455 5588
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh----Cce
Q 018437 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NTI 204 (356)
Q Consensus 129 a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~----~~~ 204 (356)
++..++.++..+ +++|+++.++|.++...+...|++++.++ .+|++++++.+.+ +++
T Consensus 105 a~~~a~~~~~~~-------------gd~vi~~~~~~~~~~~~~~~~g~~~~~~~------~~d~~~l~~~l~~~~~~~~~ 165 (385)
T TIGR01825 105 TNQGVLSALLRK-------------GDIVLSDELNHASIIDGLRLTKATKKIYK------HADMDDLDRVLRENPSYGKK 165 (385)
T ss_pred HHHHHHHHhCCC-------------CCEEEEEccccHHHHHHHHhcCCceEEeC------CCCHHHHHHHHHhhccCCCe
Confidence 888777766432 56899999999999888888888776543 4678888887764 578
Q ss_pred EEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccC-CC-CcccccCCCceEEEEcCCcCCCCC
Q 018437 205 CVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY-PD-LEWDFRLPLVKSINVSGHKYGLVY 282 (356)
Q Consensus 205 ~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~-~~-~~~~~~~~~~Ds~~~~~hK~l~~P 282 (356)
+|++....|++|.+.|+++|.++|++| ++++++|++|+.+..+... .. ...++. ...|.+..+.+|+++.+
T Consensus 166 ~v~~~~v~~~tG~~~~~~~i~~l~~~~------~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~ 238 (385)
T TIGR01825 166 LIVTDGVFSMDGDVAPLPEIVELAERY------GAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGVV 238 (385)
T ss_pred EEEEecCCcCCCCccCHHHHHHHHHHh------CCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhhcC
Confidence 888888899999999999999999999 9999999999765442100 00 011222 46788888999998543
Q ss_pred cCeeEEEE
Q 018437 283 AGVGWVVW 290 (356)
Q Consensus 283 ~g~g~l~~ 290 (356)
| |+++.
T Consensus 239 -g-G~~~~ 244 (385)
T TIGR01825 239 -G-GYAAG 244 (385)
T ss_pred -C-CEEec
Confidence 3 66654
No 171
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.70 E-value=3.1e-16 Score=150.88 Aligned_cols=153 Identities=18% Similarity=0.041 Sum_probs=120.2
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----HHHHHHhh
Q 018437 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYF 174 (356)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s----~~~~~~~~ 174 (356)
++.+.+++++|.+. .+++++|++|+..++.++..+ +++|+++.+.|.+ +...+..+
T Consensus 58 ~le~~la~l~g~~~-------~~~~~sG~~Ai~~al~al~~~-------------Gd~Vl~~~~~~~~t~~~~~~~~~~~ 117 (380)
T TIGR01325 58 AFEERIAALEGAER-------AVATATGMSAIQAALMTLLQA-------------GDHVVASRSLFGSTVGFISEILPRF 117 (380)
T ss_pred HHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEecCCcchHHHHHHHHHHHh
Confidence 34455889999864 678999999999998876542 4689988877754 44566778
Q ss_pred CCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccc
Q 018437 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (356)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (356)
|++++.++.+ |++++++++++++++|+++.|+||+|.+.|+++|.++|+++ ++++++|++|+.++.
T Consensus 118 g~~v~~v~~~------d~~~l~~~i~~~tklV~le~p~np~g~~~dl~~I~~la~~~------gi~livD~a~~~~~~-- 183 (380)
T TIGR01325 118 GIEVSFVDPT------DLNAWEAAVKPNTKLVFVETPSNPLGELVDIAALAELAHAI------GALLVVDNVFATPVL-- 183 (380)
T ss_pred CCEEEEECCC------CHHHHHHhcCCCceEEEEECCCCCCCeeeCHHHHHHHHHHc------CCEEEEECCCccccc--
Confidence 9998888753 68999999988999999999999999999999999999999 999999999975432
Q ss_pred cCCCCcccccCCCceEEEEcCCcCCCCCc-Ce-eEEEEe
Q 018437 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYA-GV-GWVVWR 291 (356)
Q Consensus 255 ~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~-g~-g~l~~~ 291 (356)
.. +. ..++|.++.|.+|+++++. .. |+++.+
T Consensus 184 ~~---pl---~~g~Divv~S~sK~l~g~g~~~gG~vv~~ 216 (380)
T TIGR01325 184 QQ---PL---KLGADVVVYSATKHIDGQGRVMGGVIAGS 216 (380)
T ss_pred CC---ch---hhCCCEEEeeccceecCCCCeEEEEEEeC
Confidence 11 12 2378999999999987763 23 566543
No 172
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.70 E-value=5.7e-16 Score=153.08 Aligned_cols=216 Identities=13% Similarity=0.050 Sum_probs=143.9
Q ss_pred ccccccCCCC-hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHH-HHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 59 NLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIA-HLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 59 ~l~~~~~~~~-~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la-~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
+++.+.+..+ ++.+.+++ +.+..+ +|....+..++.+++.+++. +.++..........+++|+|+++++.+++.+
T Consensus 104 ~l~~g~p~~~~~~~v~e~~-~~~~~~--~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~a 180 (527)
T PRK09275 104 SYVRDQLGFDADEFVYELV-DGIIGD--NYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDS 180 (527)
T ss_pred hhcCCCCCCCCCHHHHHHH-HHHhcC--CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHH
Confidence 3444444443 45666754 343322 46666788888888887554 4333321000113589999999999999886
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe--cC-CccccCHHHHHHHHhhCceEEEEecCCC
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL--EE-GYYVMNPVKAVELVDENTICVAAILGST 213 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~--~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (356)
+.... .-..+++|+++.|+|..|...+++.|.+++.|++ ++ ++|++|+++|++++++++++|++++|+|
T Consensus 181 L~~~~--------ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tkai~l~nP~N 252 (527)
T PRK09275 181 LKENG--------LLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIKALFLVNPSN 252 (527)
T ss_pred Hhhhh--------cCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCCEEEEeCCcC
Confidence 42210 0012579999999999999999988766555555 43 3589999999999999999999999999
Q ss_pred cccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCC-CCCcCeeEEE
Q 018437 214 LTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG-LVYAGVGWVV 289 (356)
Q Consensus 214 ~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l-~~P~g~g~l~ 289 (356)
|||.+-+ +++|+++|+++.. ++|+++|++|+.+...+.. .... .+.--.+..|..|.+ ++.+.+|+++
T Consensus 253 PTG~v~s~e~l~~I~~ia~~~~~----~l~II~DEvY~~f~~~~~s---~~~~-~~~~~I~v~SfSK~f~mtG~RlG~i~ 324 (527)
T PRK09275 253 PPSVAMSDESLEKIADIVNEKRP----DLMIITDDVYGTFVDDFRS---LFAV-LPYNTILVYSFSKYFGATGWRLGVIA 324 (527)
T ss_pred CcCCCCCHHHHHHHHHHHHhcCC----CcEEEECCCChhhcccccC---HHHh-CCCCEEEEeehhhhccCcHhHHhhhh
Confidence 9999965 6778888854311 8999999999875432110 0111 121223445678976 4678899998
Q ss_pred EeCC
Q 018437 290 WRTK 293 (356)
Q Consensus 290 ~~~~ 293 (356)
..++
T Consensus 325 ~~~~ 328 (527)
T PRK09275 325 LHED 328 (527)
T ss_pred cCch
Confidence 7543
No 173
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.70 E-value=3.6e-16 Score=149.23 Aligned_cols=191 Identities=16% Similarity=0.139 Sum_probs=142.6
Q ss_pred CChHHHHHHHHHHhccc-CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (356)
++++.+.+++.+++... ...|.. ++.. ++++.+++.+|.+.+ ..+++|+|+++++..++.++.++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~----~lr~~ia~~~~~~~~----~~I~~t~G~~~~i~~~~~~~~~~----- 104 (356)
T PRK04870 39 RLPAELRAELGERLAEVALNRYPD-PRAA----ALKAALRAAMGVPAG----ADVLLGNGSDELIQLLALACAKP----- 104 (356)
T ss_pred CCCHHHHHHHHHHhhccccccCCC-CCHH----HHHHHHHHHhCcCCC----CcEEEcCCHHHHHHHHHHHhcCC-----
Confidence 45678889888777532 233333 4444 455557888888642 24889999999998888776542
Q ss_pred HhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh-CceEEEEecCCCcccccCCHHHH
Q 018437 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLL 224 (356)
Q Consensus 146 ~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~i~~I 224 (356)
+++|+++.++|..+...++..|++++.+|++++ +.+|+++|++++.+ ++++|++++|+||||.+.+.+++
T Consensus 105 --------gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~-~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~ 175 (356)
T PRK04870 105 --------GATVLAPEPGFVMYRMSAKLAGLEFVGVPLTAD-FTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADV 175 (356)
T ss_pred --------CCEEEECCCCHHHHHHHHHHcCCEEEEecCCCC-CCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHH
Confidence 578999999999999999999999999999864 89999999999964 78999999999999999999999
Q ss_pred HHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 225 HDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 225 ~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
.++++.. ++++++|++|..+.. ......+. ..+ ..+..|..|++.....+|+++..
T Consensus 176 ~~i~~~~------~~~ii~De~y~~~~~----~~~~~~~~~~~~-vi~~~S~SK~~~~GlRiG~~i~~ 232 (356)
T PRK04870 176 ERIIEAA------PGLVVVDEAYQPFAG----DSWLPRLARFPN-LLVMRTVSKLGLAGLRLGYLAGH 232 (356)
T ss_pred HHHHHHC------CCEEEEECCchhhcC----cchHHHHhhCCC-EEEEecchhhhhHHHhhhhhhCC
Confidence 9999988 889999999976432 11000111 122 34566789965445568988764
No 174
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.70 E-value=8.6e-16 Score=146.66 Aligned_cols=200 Identities=11% Similarity=0.087 Sum_probs=140.4
Q ss_pred cccccccCC-CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 58 LNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 58 ~~l~~~~~~-~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
++|....++ ++++.+.+++.+.+.... .|. .++. .++++.+++.+|++++ .+++|+|+++++..++.+
T Consensus 23 i~l~~~~~~~~~p~~~~~a~~~~~~~~~-~y~-~~~~----~~lr~~ia~~~~~~~~-----~i~it~Ga~~~l~~~~~~ 91 (356)
T PRK08056 23 LDFSANINPLGMPVSLKRAIIDNLDCAE-RYP-DVEY----RHLHQALARHHQVPAS-----WILAGNGETESIFAVVSG 91 (356)
T ss_pred EEeccccCCCCCCHHHHHHHHHHHHhcc-cCc-CccH----HHHHHHHHHHhCcChh-----hEEECCCHHHHHHHHHHH
Confidence 344443333 345677888776554321 221 1222 3566678888898763 488999999999888776
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEEecCCCcc
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLT 215 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (356)
+ .+ + .+++..|++..+...++..|++++.+|+++ +++.+| +++++.+.+++++|++++|+|||
T Consensus 92 l-~~-------------g-~viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~NPT 155 (356)
T PRK08056 92 L-KP-------------R-RAMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPT 155 (356)
T ss_pred h-CC-------------C-CEEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCcCCC
Confidence 4 21 2 467778899889999999999999999964 346677 45556677788999999999999
Q ss_pred cccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCC-CCcCeeEEEEe
Q 018437 216 GEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (356)
Q Consensus 216 G~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~-~P~g~g~l~~~ 291 (356)
|.+.+ +++|+++|+++ ++++++|++|..+... .......+....-..+..|++|+++ ....+|+++..
T Consensus 156 G~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~ 227 (356)
T PRK08056 156 GLLPERQLLQAIAERCKSL------NIALILDEAFIDFIPD--ETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNS 227 (356)
T ss_pred CCCCCHHHHHHHHHHHHhc------CCEEEEecchhccCCc--chHHHHHhccCCCEEEEEechhhccCcchhheeeecC
Confidence 99977 78899999999 9999999999765421 0000001111234567788999987 56789999875
Q ss_pred C
Q 018437 292 T 292 (356)
Q Consensus 292 ~ 292 (356)
+
T Consensus 228 ~ 228 (356)
T PRK08056 228 D 228 (356)
T ss_pred C
Confidence 4
No 175
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.70 E-value=3.2e-16 Score=151.64 Aligned_cols=162 Identities=19% Similarity=0.123 Sum_probs=126.1
Q ss_pred cCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHH
Q 018437 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE 168 (356)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~ 168 (356)
..|...++|+. +++++|.+. .++++||+.|+..++.++.++ +++|+++.+.|.+..
T Consensus 62 ~~p~~~~Le~~----iA~~~g~~~-------~l~~~sG~~Ai~~al~~ll~~-------------Gd~Vl~~~~~y~~~~ 117 (400)
T PRK06234 62 GNPTSTEVENK----LALLEGGEA-------AVVAASGMGAISSSLWSALKA-------------GDHVVASDTLYGCTF 117 (400)
T ss_pred CCccHHHHHHH----HHHHhCCCc-------EEEEcCHHHHHHHHHHHHhCC-------------CCEEEEecCccchHH
Confidence 35566666665 888888653 688999999998888776542 578999998886643
Q ss_pred ----HHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEe
Q 018437 169 ----KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (356)
Q Consensus 169 ----~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD 244 (356)
..++..|++++.++.+ |++++++++++++++|++++|+||+|.+.|+++|.++|++++. ++++++|
T Consensus 118 ~~~~~~~~~~G~~v~~vd~~------d~e~l~~~i~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~----~i~livD 187 (400)
T PRK06234 118 ALLNHGLTRYGVEVTFVDTS------NLEEVRNALKANTKVVYLETPANPTLKVTDIKAISNIAHENNK----ECLVFVD 187 (400)
T ss_pred HHHHHHHhhCCeEEEEECCC------CHHHHHHHhccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCC----CCEEEEE
Confidence 4456789988888753 7899999999999999999999999999999999999999521 7999999
Q ss_pred cccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeC
Q 018437 245 AASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRT 292 (356)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~ 292 (356)
++|+.+.. .. +. ..++|.++.|.+|++.++.. .|+++.++
T Consensus 188 ea~~~~~~--~~---~l---~~g~Divv~S~sK~l~g~g~~~gG~v~~~~ 229 (400)
T PRK06234 188 NTFCTPYI--QR---PL---QLGADVVVHSATKYLNGHGDVIAGFVVGKE 229 (400)
T ss_pred CCCCchhc--CC---ch---hhCCcEEEeeccccccCCCCceeEEEEecH
Confidence 99986543 11 11 13789999999999976643 58877654
No 176
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.70 E-value=4e-16 Score=149.07 Aligned_cols=192 Identities=15% Similarity=0.049 Sum_probs=140.3
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
+++.+.+++.+.++... +....+..++ ++.+++.+|+++ ..+++|+|+++++..++.++.++
T Consensus 43 ~~~~v~~a~~~~~~~~~--~~p~~g~~~l----r~~ia~~~~~~~-----~~i~~t~G~~~~l~~~~~~~~~~------- 104 (359)
T PRK03158 43 PSPKVKEAIAAHLDELA--LYPDGYAPEL----RTKVAKHLGVDE-----EQLLFGAGLDEVIQMISRALLNP------- 104 (359)
T ss_pred CCHHHHHHHHHHHHHhh--cCCCCcHHHH----HHHHHHHhCCCH-----HHEEECCCHHHHHHHHHHHHhCC-------
Confidence 45678888877665322 2222344444 455777778865 34899999999998887776432
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHH
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDL 227 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i 227 (356)
+++|+++.|+|..+...+...|++++.+|++ + +.+|++++++++++++++|++++|+||||.+.+.++|.++
T Consensus 105 ------gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~-~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~~ 176 (359)
T PRK03158 105 ------GTNTVMAEPTFSQYRHNAIIEGAEVREVPLK-D-GGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSF 176 (359)
T ss_pred ------CCEEEEcCCCHHHHHHHHHHcCCeEEEEecC-C-CCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 5789999999999999999999999999997 3 7899999999998889999999999999999999999999
Q ss_pred HHHhhhccCCCCcEEEecccccccccccCCCC-ccc-ccCCCceEEEEcCCcCCC-CCcCeeEEEEe
Q 018437 228 LTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWD-FRLPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (356)
Q Consensus 228 ~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~-~~~~~~Ds~~~~~hK~l~-~P~g~g~l~~~ 291 (356)
++.... ++++++|++|..+..+ .... ... +....-..+..++.|.++ ....+|+++..
T Consensus 177 ~~~~~~----~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~ 237 (359)
T PRK03158 177 LESVPS----HVLVVLDEAYYEYVTA--EDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIAS 237 (359)
T ss_pred HHhCCC----CcEEEEECchHhhcCC--cccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCC
Confidence 987421 8999999999875431 1100 001 111122455567889875 34567988764
No 177
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.69 E-value=3.2e-16 Score=150.40 Aligned_cols=155 Identities=17% Similarity=0.042 Sum_probs=117.0
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch-HH---HHHHhh
Q 018437 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC-WE---KFARYF 174 (356)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s-~~---~~~~~~ 174 (356)
++.+.++++.|.+. .++++.|+.++..++ .+..+ +++|+++.+.|.+ +. ..+...
T Consensus 54 ~Le~~lA~l~g~~~-------~~~~~sG~aai~~~~-~~l~~-------------Gd~Viv~~~~y~~~~~~~~~~~~~~ 112 (377)
T PRK07671 54 ALEELIAVLEGGHA-------GFAFGSGMAAITAVM-MLFSS-------------GDHVILTDDVYGGTYRVMTKVLNRF 112 (377)
T ss_pred HHHHHHHHHhCCCc-------eEEeCCHHHHHHHHH-HHhCC-------------CCEEEECCCccchHHHHHHHHHhcC
Confidence 44555999999864 456666676665543 33221 5789999998873 33 234456
Q ss_pred CCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccc
Q 018437 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (356)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (356)
|++++.++. .|++++++++++++++|++++|+||+|.+.|+++|.++|+++ ++++++|++|+....
T Consensus 113 G~~v~~v~~------~d~~~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~------g~~lvvD~a~~~~~~-- 178 (377)
T PRK07671 113 GIEHTFVDT------SNLEEVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEK------GLLTIVDNTFMTPYW-- 178 (377)
T ss_pred CeEEEEECC------CCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEECCCCcccc--
Confidence 888888763 278999999999999999999999999999999999999999 999999999975332
Q ss_pred cCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeCCC
Q 018437 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKD 294 (356)
Q Consensus 255 ~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~~~ 294 (356)
. .+. ..++|.++.|.+|++++|.+ .|++++++++
T Consensus 179 -~--~p~---~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~ 214 (377)
T PRK07671 179 -Q--SPI---SLGADIVLHSATKYLGGHSDVVAGLVVVNSPE 214 (377)
T ss_pred -C--Chh---hhCCeEEEecCcccccCCccceeEEEEeCcHH
Confidence 1 112 23789999999999988864 5777766543
No 178
>PLN02242 methionine gamma-lyase
Probab=99.69 E-value=2.1e-16 Score=153.45 Aligned_cols=157 Identities=17% Similarity=0.034 Sum_probs=122.7
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~ 169 (356)
.|...++|+ .+++++|.+. .++++||++|+..++.++.++ +++|+++.+.|..+..
T Consensus 75 ~Pt~~~LE~----~lA~l~g~~~-------~l~~~sG~~Ai~~al~al~~~-------------GD~Vl~~~~~Y~~~~~ 130 (418)
T PLN02242 75 NPTVLNLGR----QMAALEGTEA-------AYCTASGMSAISSVLLQLCSS-------------GGHVVASNTLYGGTHA 130 (418)
T ss_pred ChhHHHHHH----HHHHHhCCCe-------EEEEccHHHHHHHHHHHHhCC-------------CCEEEEcCCcHHHHHH
Confidence 445555554 4899999975 678999999999999887653 5799999998877655
Q ss_pred HH-----HhhCCeeEEEEecCCccccCHHHHHHHHhh-CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEE
Q 018437 170 FA-----RYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (356)
Q Consensus 170 ~~-----~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~v 243 (356)
.+ +..|++++.++.+ |+++|++++++ ++++|++++++||+|.+.|+++|.++|+++ ++++++
T Consensus 131 ~~~~~~~~~~G~~~~~~d~~------d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~------gi~liv 198 (418)
T PLN02242 131 LLAHFLPRKCNITTTFVDIT------DLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEK------GVTVVV 198 (418)
T ss_pred HHHHhhhhccCceEEEcCCC------CHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHh------CCEEEE
Confidence 54 3467777666542 78999999988 499999999999999999999999999999 999999
Q ss_pred ecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEe
Q 018437 244 DAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWR 291 (356)
Q Consensus 244 D~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~ 291 (356)
|++|+.+.. .+ . ..++|.+..|.+|+++++.. .|+++.+
T Consensus 199 Dea~~~~~~---~~---~---~~g~divv~S~SK~l~g~g~~~gG~iv~~ 239 (418)
T PLN02242 199 DNTFAPMVL---SP---A---RLGADVVVHSISKFISGGADIIAGAVCGP 239 (418)
T ss_pred ECCCCccCC---CH---H---HcCCcEEEEeCccccCCCCCceEEEEEcC
Confidence 999964322 11 1 12689999999999876643 4777643
No 179
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.69 E-value=1.2e-15 Score=146.49 Aligned_cols=166 Identities=11% Similarity=-0.036 Sum_probs=113.6
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHH
Q 018437 92 VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA 171 (356)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~ 171 (356)
+...+.+++++.+++++|.+. ..++++ |+.+|...+..+.. +++.|++...+|.++...+
T Consensus 53 g~~~~~~~~e~~la~~~~~~~------~l~~~s-G~~a~~~~~~~~~~-------------~~d~ii~d~~~H~sv~~~~ 112 (370)
T PRK05937 53 GPSSLLDDLEHKIAHFHGAPE------AFIVPS-GYMANLGLCAHLSS-------------VTDYVLWDEQVHISVVYSL 112 (370)
T ss_pred CChHHHHHHHHHHHHHhCCCe------EEEECC-hHHHHHHHHHHhCC-------------CCCEEEEEhhhhHHHHHHH
Confidence 456777788999999999964 244454 55676533222211 1467788899999999888
Q ss_pred HhhCCeeEEEEecCCccccCHHHHHHHHhh------CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEec
Q 018437 172 RYFEVELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (356)
Q Consensus 172 ~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~ 245 (356)
+...... ++. ...|+++|++++++ ++++|+++++++++|.+.|+++|.++|+++ ++++|+|+
T Consensus 113 ~~~~~~~--~~~----~~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~------~~~livDe 180 (370)
T PRK05937 113 SVISGWH--QSF----RHNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKY------HAHLIVDE 180 (370)
T ss_pred HHcCCce--EEe----cCCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHc------CCEEEEEC
Confidence 8764332 222 24589999999873 456778899999999999999999999999 99999999
Q ss_pred ccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEE
Q 018437 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (356)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~ 290 (356)
+|+.+..+.........+.....+.+..+.+|.+ +|.|+|+++.
T Consensus 181 a~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~-g~~G~~vl~~ 224 (370)
T PRK05937 181 AHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKAL-GSMGAALLSS 224 (370)
T ss_pred CccccccCCCCCchHHhhCCCCCcEEEEechhhh-hcCceEEEcC
Confidence 9986655321100001111122234456677976 7888887764
No 180
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.69 E-value=9.1e-16 Score=146.85 Aligned_cols=186 Identities=16% Similarity=0.102 Sum_probs=132.0
Q ss_pred HHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcC
Q 018437 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQG 149 (356)
Q Consensus 70 ~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g 149 (356)
.+..+++.+.+..+.... .++...++|++ +++++|.+. .+.+++||.|+.+++.++.-.
T Consensus 5 ~e~~~~v~~~l~s~~~~~-~g~~~~~fE~~----~a~~~g~~~-------~~~~~sgt~Al~~al~~l~~~--------- 63 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLST-YGPYVEEFEKE----FAEYFGVKY-------AVAVSSGTSALHLALRALGLG--------- 63 (363)
T ss_dssp HHHHHHHHHHHHHTCCSS-SSHHHHHHHHH----HHHHHTSSE-------EEEESSHHHHHHHHHHHTTGG---------
T ss_pred HHHHHHHHHHHHhCCccC-CCHHHHHHHHH----HHHHhCCCe-------EEEeCChhHHHHHHHHhcCCC---------
Confidence 345666777776552221 25677788876 788888764 789999999999999886421
Q ss_pred CCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHH
Q 018437 150 KPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLT 229 (356)
Q Consensus 150 ~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~ 229 (356)
.+++|++|..++.+...++...|+++++++++++++.||++.+++++++++++|+++ +..|...|+++|.++|+
T Consensus 64 ---~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t~ai~~~---h~~G~~~d~~~i~~~~~ 137 (363)
T PF01041_consen 64 ---PGDEVIVPAYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKTKAILVV---HLFGNPADMDAIRAIAR 137 (363)
T ss_dssp ---TTSEEEEESSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTEEEEEEE----GGGB---HHHHHHHHH
T ss_pred ---cCceEecCCCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCccEEEEe---cCCCCcccHHHHHHHHH
Confidence 257999999999999999999999999999997789999999999999999998844 55688889999999999
Q ss_pred HhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEc--CCcCCCCCcCeeEEEEeCCCC
Q 018437 230 KKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVS--GHKYGLVYAGVGWVVWRTKDD 295 (356)
Q Consensus 230 ~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~--~hK~l~~P~g~g~l~~~~~~~ 295 (356)
++ |++++-|+|++.+.. ......-. . -|..++| ..|.+.+..| |++++++++.
T Consensus 138 ~~------~i~lIeD~a~a~g~~--~~g~~~G~--~--gd~~~fSf~~~K~i~~geG-G~v~~~~~~~ 192 (363)
T PF01041_consen 138 KH------GIPLIEDAAQAFGAR--YKGRPVGS--F--GDIAIFSFHPTKIITTGEG-GAVVTNDPEL 192 (363)
T ss_dssp HT------T-EEEEE-TTTTT-E--ETTEETTS--S--SSEEEEESSTTSSS-SSS--EEEEESTHHH
T ss_pred Hc------CCcEEEccccccCce--eCCEeccC--C--CCceEecCCCCCCCcCCCC-eeEEecHHHH
Confidence 99 999999999986543 22211111 1 2555555 5588855555 8888877543
No 181
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.69 E-value=6.7e-16 Score=147.06 Aligned_cols=196 Identities=13% Similarity=0.073 Sum_probs=141.4
Q ss_pred ccccccCCC-ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHH
Q 018437 59 NLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF 137 (356)
Q Consensus 59 ~l~~~~~~~-~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~ 137 (356)
+|....++. +++.+.+++.+.+......|. .++.. ++++.+++++++++ ..+++|+|+++++.+++.++
T Consensus 28 ~l~~~~~~~~~~~~~~~a~~~~~~~~~~~y~-~~~~~----~lr~aia~~~~~~~-----~~I~it~G~~~al~~~~~~l 97 (353)
T PRK05387 28 KLNTNENPYPPSPKVLEAIRAALGDDLRLYP-DPNAD----ALRQAIAAYYGLDP-----EQVFVGNGSDEVLAHAFLAF 97 (353)
T ss_pred eccCCCCCCCCCHHHHHHHHHHhhhhhhcCC-CCcHH----HHHHHHHHHhCCCH-----HHEEEcCCHHHHHHHHHHHh
Confidence 344444433 356788888766653333332 22333 55666888888876 34899999999999999887
Q ss_pred HHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccc
Q 018437 138 KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (356)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~ 217 (356)
.++ +++|++++|+|..+...++..|++++.+|++++ +.+|+++|++ ++++|++++|+||||.
T Consensus 98 ~~~-------------gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~----~~~~v~~~~P~NPtG~ 159 (353)
T PRK05387 98 FNH-------------DRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDD-FSIDVEDYLR----PNGGIIFPNPNAPTGI 159 (353)
T ss_pred cCC-------------CCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCC-CCCCHHHHHh----cCCEEEEeCCCCCCCC
Confidence 653 578999999999999989999999999999764 8999999874 3578899999999999
Q ss_pred cCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCC-CCcCeeEEEEe
Q 018437 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (356)
Q Consensus 218 ~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~-~P~g~g~l~~~ 291 (356)
+.+.+++.++++.+. ++++++|++|..+.. ...........-..+..++.|.++ ....+|+++..
T Consensus 160 ~~~~~~~~~l~~~~~-----~~~livDe~y~~~~~----~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~ 225 (353)
T PRK05387 160 ALPLAEIERILAANP-----DSVVVIDEAYVDFGG----ESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGH 225 (353)
T ss_pred CCCHHHHHHHHHhCC-----CcEEEEeCcccccCC----cchHHHHhhCCCEEEEEehhHhhcchhhhceeeecC
Confidence 999999999998752 899999999964321 100001111122466778999865 44678998753
No 182
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.69 E-value=6.6e-16 Score=148.07 Aligned_cols=198 Identities=12% Similarity=-0.008 Sum_probs=148.2
Q ss_pred CChHHHHHHHHHHhcc---cCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINK---NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~---~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (356)
++++.+.+++.+.+.. ....| ..++...+++.+.+++.+.+|++.+. ..+++|+|+++++..++.++.++
T Consensus 39 ~~~~~~~~al~~~l~~~~~~~~~Y-~~~g~~~lr~aia~~~~~~~~~~~~~---~~I~it~G~~~~l~~~~~~~~~~--- 111 (368)
T PRK03317 39 PPSPALVADIAEAVAEAAAGLNRY-PDRDAVALRADLAAYLTAQTGVGLTV---ENVWAANGSNEILQQLLQAFGGP--- 111 (368)
T ss_pred CCCHHHHHHHHHHHhhhhhhhccC-CCCchHHHHHHHHHHhhhhccCCCCh---hhEEECCCHHHHHHHHHHHhcCC---
Confidence 4457788888776542 22223 23467788889888888887765422 45899999999999999887653
Q ss_pred HHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh-CceEEEEecCCCcccccCCHH
Q 018437 144 KRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVK 222 (356)
Q Consensus 144 ~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~i~ 222 (356)
++.|+++.|+|..+...++..|++++.++.++ ++.+|++++++++.+ ++++|+++.|+||||.+.+.+
T Consensus 112 ----------gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~ 180 (368)
T PRK03317 112 ----------GRTALGFVPSYSMHPIIARGTHTEWVEGPRAA-DFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLD 180 (368)
T ss_pred ----------CCEEEEeCCChHHHHHHHHhcCCeeEEcccCC-CCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHH
Confidence 57899999999999999999999988888765 389999999999974 678899999999999999999
Q ss_pred HHHHHHHHhhhccCCCCcEEEecccccccccccCCCC-cccccCCCceEE-EEcCCcCCC-CCcCeeEEEEe
Q 018437 223 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWDFRLPLVKSI-NVSGHKYGL-VYAGVGWVVWR 291 (356)
Q Consensus 223 ~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~Ds~-~~~~hK~l~-~P~g~g~l~~~ 291 (356)
++.++++.+ ++++++|++|+.+... +.. ...+....-+.+ ..++.|.++ ....+|+++..
T Consensus 181 ~l~~l~~~~------~~~lI~DE~y~~~~~~---~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~ 243 (368)
T PRK03317 181 DVEAILDAA------PGIVVVDEAYAEFRRS---GTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAA 243 (368)
T ss_pred HHHHHHHHC------CceEEEeCCchhhccc---CCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCC
Confidence 999999999 9999999999875321 111 111110111333 347899875 44667888763
No 183
>PRK05968 hypothetical protein; Provisional
Probab=99.69 E-value=8.7e-16 Score=148.12 Aligned_cols=156 Identities=18% Similarity=0.106 Sum_probs=121.0
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----
Q 018437 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC---- 166 (356)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s---- 166 (356)
|...++| +.+++++|.+. .+++++|+.|+.+++.+...+ +++|+++.+.|.+
T Consensus 63 p~~~~le----~~lA~l~g~~~-------av~~~sG~~Ai~~al~al~~~-------------Gd~Vl~~~~~y~~t~~~ 118 (389)
T PRK05968 63 PTVRAFE----EMLAKLEGAED-------ARGFASGMAAISSTVLSFVEP-------------GDRIVAVRHVYPDAFRL 118 (389)
T ss_pred hhHHHHH----HHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEeCCCchHHHHH
Confidence 3444555 45899999874 466677888998888765432 5789999988875
Q ss_pred HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecc
Q 018437 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (356)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a 246 (356)
+...+...|+++++++.+ |++++++++ +++++|++.+|+++++.+.|+++|.++|+++ ++++++|++
T Consensus 119 ~~~~~~~~G~~v~~vd~~------d~~~l~~~i-~~tklV~ie~pt~~~~~~~dl~~i~~la~~~------gi~vivD~a 185 (389)
T PRK05968 119 FETILKRMGVEVDYVDGR------DEEAVAKAL-PGAKLLYLESPTSWVFELQDVAALAALAKRH------GVVTMIDNS 185 (389)
T ss_pred HHHHHHHcCceEEEeCCC------CHHHHHHhc-ccCCEEEEECCCCCCCcHHHHHHHHHHHHHc------CCEEEEECC
Confidence 345666789999888643 789999988 5789999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEe
Q 018437 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWR 291 (356)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~ 291 (356)
|+.++. .. +. ..++|.++.|.+|++.+|.+ .|+++.+
T Consensus 186 ~a~~~~--~~---p~---~~g~Divv~S~tK~l~g~~~~~gG~i~~~ 224 (389)
T PRK05968 186 WASPVF--QR---PI---TLGVDLVIHSASKYLGGHSDTVAGVVAGS 224 (389)
T ss_pred Ccchhc--cC---ch---hcCCcEEEeeccccccCCCCeEEEEEEEC
Confidence 976543 11 11 23789999999999988755 6776643
No 184
>PRK05939 hypothetical protein; Provisional
Probab=99.69 E-value=2.1e-15 Score=145.56 Aligned_cols=150 Identities=16% Similarity=0.008 Sum_probs=118.7
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch---
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC--- 166 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s--- 166 (356)
.|....+|++ ++++.|... .+++++|+.|+..++.++.++ +++|+++.+.|.+
T Consensus 46 ~p~~~~lE~~----la~leg~~~-------~v~~ssG~~Ai~~~l~all~~-------------Gd~Vv~~~~~y~~t~~ 101 (397)
T PRK05939 46 TPTTAALEAK----ITKMEGGVG-------TVCFATGMAAIAAVFLTLLRA-------------GDHLVSSQFLFGNTNS 101 (397)
T ss_pred CHHHHHHHHH----HHHHhCCCe-------EEEeCCHHHHHHHHHHHHcCC-------------CCEEEECCCccccHHH
Confidence 4555666665 888988864 566667789998888776442 5789999887754
Q ss_pred HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecc
Q 018437 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (356)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a 246 (356)
+...+...|++++.+++. |+++|+++++++|++|++++++||+|.+.|+++|+++|+++ |+++++|++
T Consensus 102 ~~~~l~~~G~~v~~v~~~------d~e~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~------gi~livD~t 169 (397)
T PRK05939 102 LFGTLRGLGVEVTMVDAT------DVQNVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRER------GLLYVVDNT 169 (397)
T ss_pred HHHHHHhcCCEEEEECCC------CHHHHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHc------CCEEEEECC
Confidence 334566789999888753 78999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCcccccCCCceEEEEcCCcCCCCCc
Q 018437 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA 283 (356)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~ 283 (356)
|+.+.. + +....++|.+..|.||+++++.
T Consensus 170 ~a~~~~--~------~~~~~gaDivv~S~sK~~~g~g 198 (397)
T PRK05939 170 MTSPWL--F------RPKDVGASLVINSLSKYIAGHG 198 (397)
T ss_pred cccccc--c------CccccCCEEEEecCeecccCCC
Confidence 875422 1 1112379999999999987653
No 185
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.69 E-value=9.7e-16 Score=146.43 Aligned_cols=188 Identities=15% Similarity=0.071 Sum_probs=134.7
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEE-eCChhHHHHHHHHHHHHHHHHHHH
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG-TVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~-t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
++|.+.+++.+++... ..|.. +.. .++++.+++++|++++ ..++ |+|+++++..++.++.++
T Consensus 48 ~~~~~~~~~~~~~~~~-~~y~~-~~~----~~lr~~ia~~~~~~~~-----~i~~~~~Ga~~~i~~~~~~~~~~------ 110 (361)
T PRK00950 48 PSPKAVEAIEKELSKI-HRYPE-PDA----PELREALSKYTGVPVE-----NIIVGGDGMDEVIDTLMRTFIDP------ 110 (361)
T ss_pred CCHHHHHHHHHHHHhh-cCCCC-CCH----HHHHHHHHHHhCCCHH-----HEEEeCCCHHHHHHHHHHHhcCC------
Confidence 4567777776655432 12211 222 3556668888898762 3667 678888887777665332
Q ss_pred hcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHH
Q 018437 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHD 226 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~ 226 (356)
+++|+++.++|..+...++..|++++.+|.+. ++.+|+++|++++++++++|++++|+||||.+.|.++|.+
T Consensus 111 -------gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~ 182 (361)
T PRK00950 111 -------GDEVIIPTPTFSYYEISAKAHGAKPVYAKREE-DFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPEEDIRK 182 (361)
T ss_pred -------CCEEEEcCCChHHHHHHHHHcCCEEEEeecCC-CCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCHHHHHH
Confidence 46899999999889888999999999999765 4899999999999888899999999999999999999999
Q ss_pred HHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCCC-CcCeeEEEEe
Q 018437 227 LLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLV-YAGVGWVVWR 291 (356)
Q Consensus 227 i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~-P~g~g~l~~~ 291 (356)
+|+++ ++++++|++|+.+.- ........ ... -.+..+..|.++. ...+|+++..
T Consensus 183 l~~~~------~~~li~De~y~~~~~----~~~~~~~~~~~~-vi~~~S~SK~~g~~GlRiG~~~~~ 238 (361)
T PRK00950 183 ILEST------DALVFVDEAYVEFAE----YDYTPLALEYDN-LIIGRTFSKVFGLAGLRIGYGFVP 238 (361)
T ss_pred HHHHC------CcEEEEECchhhhCc----cchHHHHHhcCC-EEEEEeehHhhcCchhhcchhcCC
Confidence 99999 999999999976431 11100011 111 1344568898753 3457888753
No 186
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.69 E-value=6.5e-16 Score=150.40 Aligned_cols=155 Identities=18% Similarity=0.101 Sum_probs=119.4
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHH----HHHHh
Q 018437 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE----KFARY 173 (356)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~----~~~~~ 173 (356)
+++.+.++++.|.+. .+++++|+.|+..++.++..+ +++||++...|.+.. ..+..
T Consensus 72 ~~le~~la~l~g~~~-------~v~fsSG~~Ai~~al~~ll~~-------------Gd~VI~~~~~y~~t~~~~~~~l~~ 131 (437)
T PRK05613 72 EALENRIASLEGGVH-------AVAFASGQAAETAAILNLAGA-------------GDHIVTSPRLYGGTETLFLVTLNR 131 (437)
T ss_pred HHHHHHHHHHhCCCe-------EEEeCCHHHHHHHHHHHhcCC-------------CCEEEECCCccHHHHHHHHHHHHh
Confidence 344555899998853 566667778888777765321 579999999988763 44567
Q ss_pred hCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccccccc
Q 018437 174 FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP 253 (356)
Q Consensus 174 ~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~ 253 (356)
.|+++++++ +.. |+++|+++++++|++|++.+++||+|.+.|+++|+++|+++ |+++|||++++.+..
T Consensus 132 ~Gi~v~~vd-~~~----d~e~l~~~l~~~tk~V~~e~~~Np~~~v~di~~I~~la~~~------gi~livD~t~a~g~~- 199 (437)
T PRK05613 132 LGIEVTFVE-NPD----DPESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRN------QVPLIVDNTIATAAL- 199 (437)
T ss_pred cCeEEEEEC-CCC----CHHHHHHhCCccCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCeEEEECCCccccc-
Confidence 799999998 332 89999999999999999999999999999999999999999 999999999875433
Q ss_pred ccCCCCcccccCCCceEEEEcCCcCCCCC-cCeeEEEEe
Q 018437 254 FLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVGWVVWR 291 (356)
Q Consensus 254 ~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~g~g~l~~~ 291 (356)
..+ . ..++|.++.|+||+++++ .+.|.+++.
T Consensus 200 -~~p---~---~~GaDivv~S~~K~l~G~gd~~gG~vv~ 231 (437)
T PRK05613 200 -VRP---L---ELGADVVVASLTKFYTGNGSGLGGVLID 231 (437)
T ss_pred -cCh---H---HhCCCEEEeeccceecCCCcceeEEEEe
Confidence 111 1 248999999999998654 234555553
No 187
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.69 E-value=6.9e-16 Score=148.75 Aligned_cols=159 Identities=14% Similarity=0.071 Sum_probs=120.3
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~ 169 (356)
.|...++|+. +++++|.+. .+++++|+.|+..++.++.++ +++|+++.+.|.....
T Consensus 60 ~pt~~~Le~~----lA~l~G~~~-------al~~~sG~~Ai~~~l~al~~~-------------Gd~Vv~~~~~y~~~~~ 115 (386)
T PRK06767 60 NPTVKLFEER----MAVLEGGEE-------ALAFGSGMAAISATLIGFLKA-------------GDHIICSNGLYGCTYG 115 (386)
T ss_pred CcchHHHHHH----HHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEcCCcHHHHHH
Confidence 4455555554 899999753 577778888988887776542 5789999998876544
Q ss_pred HHH----hhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEec
Q 018437 170 FAR----YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (356)
Q Consensus 170 ~~~----~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~ 245 (356)
... ..|+++..++. .|++++++++++++++|++++|+||+|.+.|+++|.++|+++ ++++++|+
T Consensus 116 ~~~~~~~~~gi~~~~~~~------~d~~~l~~~i~~~tklV~lesp~NptG~v~dl~~I~~la~~~------g~~vivD~ 183 (386)
T PRK06767 116 FLEVLEEKFMITHSFCDM------ETEADIENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRN------GLLVIVDN 183 (386)
T ss_pred HHHHHHhhcCeEEEEeCC------CCHHHHHHhhCcCceEEEEeCCCCCCceecCHHHHHHHHHHc------CCEEEEEC
Confidence 433 34555554432 378999999998999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeC
Q 018437 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRT 292 (356)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~ 292 (356)
+|+.+.. .. +. ..++|.++.|.+|+++++.. .|+++.++
T Consensus 184 a~a~~~~--~~---pl---~~g~Div~~S~sK~l~g~g~~~gG~v~~~~ 224 (386)
T PRK06767 184 TFCSPYL--QR---PL---ELGCDAVVHSATKYIGGHGDVVAGVTICKT 224 (386)
T ss_pred CCccccc--CC---ch---hcCCcEEEecCcceecCCCCceeEEEEeCh
Confidence 9975332 11 11 24789999999999977654 57777654
No 188
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.69 E-value=9.6e-16 Score=149.30 Aligned_cols=159 Identities=16% Similarity=0.127 Sum_probs=125.9
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch---
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC--- 166 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s--- 166 (356)
.|....+|+. ++++.|.+. .+++++|+.|+..++.++..+ +++|+++.+.|..
T Consensus 63 ~p~~~~Le~~----lA~leg~~~-------al~~~sG~~Ai~~al~~ll~~-------------GD~Vlv~~~~y~~t~~ 118 (431)
T PRK08248 63 NPTTDVFEKR----IAALEGGIG-------ALAVSSGQAAITYSILNIASA-------------GDEIVSSSSLYGGTYN 118 (431)
T ss_pred CchHHHHHHH----HHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEccCchhhHHH
Confidence 4555566655 888988754 789999999999998876442 5789999987754
Q ss_pred -HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEec
Q 018437 167 -WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (356)
Q Consensus 167 -~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~ 245 (356)
+...++..|++++.++++ |++++++++++++++|++++++||+|.+.|+++|.++|+++ ++++++|+
T Consensus 119 ~~~~~~~~~Gv~v~~vd~~------d~e~l~~ai~~~tklV~l~sp~NPtG~v~di~~I~~la~~~------gi~vIvD~ 186 (431)
T PRK08248 119 LFAHTLPKLGITVKFVDPS------DPENFEAAITDKTKALFAETIGNPKGDVLDIEAVAAIAHEH------GIPLIVDN 186 (431)
T ss_pred HHHHHHHhCCEEEEEECCC------CHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEeC
Confidence 345566789999888752 78999999998999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCcccccCCCceEEEEcCCcCCCCCc-CeeEEEEeC
Q 018437 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA-GVGWVVWRT 292 (356)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~-g~g~l~~~~ 292 (356)
+++.+.. . ..+ ..++|.++.|.|||+++|. .+|.+++.+
T Consensus 187 t~a~~~~---~----~pl-~~gaDivv~S~tK~lgg~g~~~Gg~v~~~ 226 (431)
T PRK08248 187 TFASPYL---L----RPI-EHGADIVVHSATKFIGGHGTSIGGVIVDS 226 (431)
T ss_pred CCCcccc---C----Chh-HcCCCEEEEcCccccCCCCCceEEEEEeC
Confidence 9874322 1 111 2489999999999997775 366666644
No 189
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.69 E-value=7.1e-16 Score=150.09 Aligned_cols=160 Identities=15% Similarity=0.013 Sum_probs=122.4
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~ 169 (356)
.|....+|+ .++++.|.+. .+++++|+.|+..++.++..+ +++|+++...|.....
T Consensus 68 ~p~~~~Le~----~lA~l~g~~~-------av~~sSG~aAi~~al~all~~-------------Gd~Vv~~~~~y~~t~~ 123 (436)
T PRK07812 68 NPTQDVVEQ----RIAALEGGVA-------ALLLASGQAAETFAILNLAGA-------------GDHIVSSPRLYGGTYN 123 (436)
T ss_pred CchHHHHHH----HHHHHhCCCe-------EEEEccHHHHHHHHHHHHhCC-------------CCEEEEeCCcchHHHH
Confidence 345455554 5899999875 688889999999998877542 5789988887766443
Q ss_pred ----HHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEec
Q 018437 170 ----FARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (356)
Q Consensus 170 ----~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~ 245 (356)
.+...|++++.++ +. .|++++++++++++++|++.+++||+|.+.|+++|.++||++ |++++||+
T Consensus 124 ~~~~~l~~~Gi~v~~vd-d~----~d~e~l~~ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~------gi~liVD~ 192 (436)
T PRK07812 124 LFHYTLPKLGIEVSFVE-DP----DDLDAWRAAVRPNTKAFFAETISNPQIDVLDIPGVAEVAHEA------GVPLIVDN 192 (436)
T ss_pred HHHHHhhcCeEEEEEEC-CC----CCHHHHHHhCCCCCeEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEEC
Confidence 3344677777775 32 289999999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCcccccCCCceEEEEcCCcCCCCCc-CeeEEEEeC
Q 018437 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA-GVGWVVWRT 292 (356)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~-g~g~l~~~~ 292 (356)
+++.+.. .. +. ..++|.++.|+||+++++. ..|.+++.+
T Consensus 193 t~a~~~~--~~---pl---~~GaDivv~S~tK~lgg~G~~i~G~vv~~ 232 (436)
T PRK07812 193 TIATPYL--IR---PL---EHGADIVVHSATKYLGGHGTAIAGVIVDG 232 (436)
T ss_pred CCccccc--CC---ch---hcCCCEEEEecccccCCCCCeEEEEEEcC
Confidence 9875433 11 11 2489999999999996553 255555543
No 190
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.69 E-value=6.6e-16 Score=147.93 Aligned_cols=201 Identities=19% Similarity=0.090 Sum_probs=141.5
Q ss_pred cccccccCC-CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 58 LNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 58 ~~l~~~~~~-~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
+.|..+.++ ++++.+.+++.+.+..... | ...+..+ +++.+++.+|+++ ..+++|+|+++++.+++.+
T Consensus 32 i~l~~nen~~~~~~~v~~a~~~~~~~~~~-Y-p~~g~~~----Lr~aia~~~~~~~-----~~I~vt~Gs~e~i~~~~~~ 100 (366)
T PRK01533 32 VKLASNENPFGCSPRVLDELQKSWLDHAL-Y-PDGGATT----LRQTIANKLHVKM-----EQVLCGSGLDEVIQIISRA 100 (366)
T ss_pred EEeCCCCCCCCCCHHHHHHHHHHHHhcCc-C-CCCCHHH----HHHHHHHHhCCCc-----ceEEECCCHHHHHHHHHHH
Confidence 334444444 3457888888766543222 2 2334444 4455777788886 3489999999999999888
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCccc
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG 216 (356)
+.++ +++|+++.|+|..+...++..|++++.||+++ +.+|+++|++++++++++|++++|+||||
T Consensus 101 l~~~-------------gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~--~~~d~~~l~~~~~~~~~~v~i~~P~NPTG 165 (366)
T PRK01533 101 VLKA-------------GDNIVTAGATFPQYRHHAIIEGCEVKEVALNN--GVYDLDEISSVVDNDTKIVWICNPNNPTG 165 (366)
T ss_pred hcCC-------------CCEEEEcCCcHHHHHHHHHHcCCEEEEeecCC--CCcCHHHHHHHhCcCCcEEEEeCCCCCCC
Confidence 7543 57899999999999999999999999999963 57999999999988899999999999999
Q ss_pred ccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCC-ccc-ccCCCceEEEEcCCcCCC-CCcCeeEEEE
Q 018437 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWD-FRLPLVKSINVSGHKYGL-VYAGVGWVVW 290 (356)
Q Consensus 217 ~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~-~~~~~~Ds~~~~~hK~l~-~P~g~g~l~~ 290 (356)
.+.+.+++.++++...+ +.++++|++|..+... .... ... +....--.+.-|+.|.++ ....+|+++.
T Consensus 166 ~~~~~~~l~~l~~~~~~----~~~~iiDe~y~~~~~~--~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~ 236 (366)
T PRK01533 166 TYVNDRKLTQFIEGISE----NTLIVIDEAYYEYVTA--KDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVG 236 (366)
T ss_pred CCcCHHHHHHHHHhCCC----CCEEEEEccHHHhhcc--ccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhC
Confidence 99888877777765421 3467889999754421 0000 001 111111244556889765 5677888875
No 191
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.68 E-value=2.7e-15 Score=144.23 Aligned_cols=182 Identities=12% Similarity=0.068 Sum_probs=132.3
Q ss_pred HHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCC
Q 018437 72 CDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKP 151 (356)
Q Consensus 72 v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~ 151 (356)
-.+++.+.+..+.... .. .+.+++.+++++.+|.+. .++|+||+.|+.+++.++.-
T Consensus 13 ~~~~~~~~l~~~~~~g-~~----~~~~~~e~~la~~~g~~~-------~v~~~sgt~al~~~l~~~~~------------ 68 (375)
T PRK11706 13 ELDYIQQAMSSGKLCG-DG----GFTRRCQQWLEQRFGSAK-------VLLTPSCTAALEMAALLLDI------------ 68 (375)
T ss_pred HHHHHHHHHHcCCccC-CC----HHHHHHHHHHHHHhCCCe-------EEEECCHHHHHHHHHHHhCC------------
Confidence 3555666665432211 12 234556666888888864 78999999998887765421
Q ss_pred CCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHh
Q 018437 152 YDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (356)
Q Consensus 152 ~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~ 231 (356)
..+++|+++.++|.++..++...|++++.++++++++.+|+++|++++++++++|++++ ++|...|+++|.++|+++
T Consensus 69 ~~Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~~tk~i~~~~---~~G~~~~~~~i~~la~~~ 145 (375)
T PRK11706 69 QPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITPKTRAIVPVH---YAGVACEMDTIMALAKKH 145 (375)
T ss_pred CCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCCCCeEEEEeC---CCCCccCHHHHHHHHHHc
Confidence 12579999999999999999999999999999876689999999999998899888664 689999999999999999
Q ss_pred hhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCC--cCCCCCcCeeEEEEeCC
Q 018437 232 NEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGH--KYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 232 ~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~h--K~l~~P~g~g~l~~~~~ 293 (356)
++++++|+||+.+.. .... +. . ...|.-++|+| |.+.++.| |++++.++
T Consensus 146 ------~i~vIeD~a~a~g~~--~~~~-~~--g-~~~~~~~~Sf~~~K~l~~g~g-G~~~~~~~ 196 (375)
T PRK11706 146 ------NLFVVEDAAQGVMST--YKGR-AL--G-TIGHIGCFSFHETKNYTAGEG-GALLINDP 196 (375)
T ss_pred ------CCEEEEECccccccc--cCCe-ee--e-cCcCEEEEeCCCCccccccCC-eEEEECCH
Confidence 999999999986542 1111 11 1 11355556666 98855444 55555554
No 192
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.68 E-value=2.3e-15 Score=148.55 Aligned_cols=216 Identities=11% Similarity=-0.013 Sum_probs=139.0
Q ss_pred cccccCCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHH
Q 018437 60 LASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (356)
Q Consensus 60 l~~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~ 139 (356)
+..+.+..+++.+.+.+.+.+... .++....+....|..+..++.+.++..........+++|+|+++|+.+++.++..
T Consensus 99 l~~g~p~~~~~~~~~~~~~~~~~~-~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~ 177 (521)
T TIGR03801 99 YVIDQLGFDPDAFLYEMCDGIIGD-NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKA 177 (521)
T ss_pred hcCCCCCCCCCHHHHHHHHHhhcC-CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhH
Confidence 444444444433334444443212 1222333444455444467676655432111112589999999999998876422
Q ss_pred HHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhh--CCeeEEEEecC-Cc-----cccCHHHHHHHHhhCceEEEEecC
Q 018437 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYF--EVELKEVKLEE-GY-----YVMNPVKAVELVDENTICVAAILG 211 (356)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~--G~~v~~v~~~~-~~-----~~~d~~~L~~~i~~~~~~v~~~~~ 211 (356)
... -..+++|+++.|+|..|...+++. |++++.|++++ +. |++|+++|++++++++++|++++|
T Consensus 178 ~~l--------l~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai~l~nP 249 (521)
T TIGR03801 178 NEL--------LKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKALFVVNP 249 (521)
T ss_pred hhc--------CCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCcEEEEeCC
Confidence 100 112579999999999999998876 56666777653 22 899999999998889999999999
Q ss_pred CCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCC-CCCcCeeE
Q 018437 212 STLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG-LVYAGVGW 287 (356)
Q Consensus 212 ~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l-~~P~g~g~ 287 (356)
+||||.+-+ +++|.++|++++. ++++++|.+|+.+..++.+. ... .+.--.+..|..|.+ .+.+.+|+
T Consensus 250 ~NPTG~vls~e~l~~I~~ia~~~~~----~l~II~DEvY~~f~~~~~sl---~~~-~~~~vI~v~SfSK~fg~~G~RlG~ 321 (521)
T TIGR03801 250 SNPPSVAMSDESIEKIVDIVANDRP----DLMILTDDVYGTFVDDFRSL---FAE-LPYNTIGVYSFSKYFGATGWRLGT 321 (521)
T ss_pred CCCCCCCCCHHHHHHHHHHHHhcCC----CeEEEECCCchhhcccccch---hhh-CCCCEEEEEcchhhccCchhhhhh
Confidence 999999965 6778888887522 89999999998754322110 011 111124455688975 56789999
Q ss_pred EEEeC
Q 018437 288 VVWRT 292 (356)
Q Consensus 288 l~~~~ 292 (356)
++..+
T Consensus 322 i~~~~ 326 (521)
T TIGR03801 322 IALHK 326 (521)
T ss_pred hhcCc
Confidence 98754
No 193
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.68 E-value=1.1e-15 Score=150.90 Aligned_cols=184 Identities=14% Similarity=0.073 Sum_probs=136.5
Q ss_pred cccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch
Q 018437 87 MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC 166 (356)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s 166 (356)
|....+...+++++.+++.+.+|.... .....+++|+|+++++.+.+.+++++ ++.|+++.|+|..
T Consensus 82 Y~~~~G~~~LR~aiA~~l~~~~~~~~~-v~~~~Iiit~Ga~~al~~l~~~l~~p-------------Gd~Vlv~~P~Y~~ 147 (468)
T PLN02450 82 FQDYHGLPAFKNALAEFMSEIRGNKVT-FDPNKLVLTAGATSANETLMFCLAEP-------------GDAFLLPTPYYPG 147 (468)
T ss_pred CCCCCChHHHHHHHHHHHHHhhCCCCC-cChHHeEEccChHHHHHHHHHHhCCC-------------CCEEEECCCCCCc
Confidence 444557788999999999887774310 01134899999999999998887653 5799999999999
Q ss_pred HHHHHH-hhCCeeEEEEec-CCccccCHHHHHHHHhh------CceEEEEecCCCcccccCC---HHHHHHHHHHhhhcc
Q 018437 167 WEKFAR-YFEVELKEVKLE-EGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFED---VKLLHDLLTKKNEET 235 (356)
Q Consensus 167 ~~~~~~-~~G~~v~~v~~~-~~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~ 235 (356)
+...+. ..|++++.||++ ++++.+|+++|++++.+ ++++|++++|+||||.+-+ +++|.++|+++
T Consensus 148 ~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~---- 223 (468)
T PLN02450 148 FDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAK---- 223 (468)
T ss_pred hHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHC----
Confidence 988877 589999999986 34588999999998864 6889999999999999855 56788888899
Q ss_pred CCCCcEEEecccccccccccCCCC-c-cccc---------CCCceEEEEcCCcCCC-CCcCeeEEEEeC
Q 018437 236 GWDTPIHVDAASGGFIAPFLYPDL-E-WDFR---------LPLVKSINVSGHKYGL-VYAGVGWVVWRT 292 (356)
Q Consensus 236 ~~~~~l~vD~a~~~~~~~~~~~~~-~-~~~~---------~~~~Ds~~~~~hK~l~-~P~g~g~l~~~~ 292 (356)
++++++|++|+.+... .+.. . .... ...--.+..+..|.++ ....+|+++..+
T Consensus 224 --~~~iI~DE~Y~~~~f~--~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~ 288 (468)
T PLN02450 224 --NIHLISDEIYSGTVFD--SPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSND 288 (468)
T ss_pred --CcEEEEEccccccccC--CCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECC
Confidence 9999999999875431 1100 0 0100 0111234567899764 778999998754
No 194
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.68 E-value=2.1e-15 Score=145.19 Aligned_cols=198 Identities=13% Similarity=-0.048 Sum_probs=142.0
Q ss_pred cccccccCC-CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 58 LNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 58 ~~l~~~~~~-~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
++|..+.++ +++|.+.+++.... ....| ..++.. ++++.+++++|+++ ..+++|+|+++++..++.+
T Consensus 55 i~l~~n~~p~~~~~~v~~a~~~~~--~~~~Y-p~~~~~----~lr~~ia~~~~~~~-----~~I~~t~Ga~~~i~~~~~~ 122 (380)
T PLN03026 55 VKLDANENPYGPPPEVLEALGNMK--FPYVY-PDPESR----RLRAALAEDSGLES-----ENILVGCGADELIDLLMRC 122 (380)
T ss_pred EEccCCCCCCCCCHHHHHHHHhhH--hhccC-CCCCHH----HHHHHHHHHhCcCh-----hhEEEcCCHHHHHHHHHHH
Confidence 344444333 34566777775421 11112 123333 46666888889876 3488999999999988877
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHH-hhCceEEEEecCCCcc
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV-DENTICVAAILGSTLT 215 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i-~~~~~~v~~~~~~~~t 215 (356)
+.++ +++|+++.|+|..+...++..|++++.+|.+++ +.+|+++|++++ ++++++|++++|+|||
T Consensus 123 ~~~~-------------gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~~~~~~~~~v~l~~P~NPT 188 (380)
T PLN03026 123 VLDP-------------GDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPD-FSLDVPRIVEAVETHKPKLLFLTSPNNPD 188 (380)
T ss_pred hcCC-------------CCEEEEcCCChHHHHHHHHHcCCEEEEeecCCC-CCcCHHHHHHHHhccCCcEEEEeCCCCCC
Confidence 6432 578999999999899999999999999998754 899999999999 6789999999999999
Q ss_pred cccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCC-CCcCeeEEEEe
Q 018437 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (356)
Q Consensus 216 G~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~-~P~g~g~l~~~ 291 (356)
|.+.+.+++.++++ . .+++++|++|..+... ......+....-..+.-++.|.++ +...+|+++..
T Consensus 189 G~~~~~~~l~~l~~-~------~~~vi~DeaY~~~~~~---~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~ 255 (380)
T PLN03026 189 GSIISDDDLLKILE-L------PILVVLDEAYIEFSTQ---ESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFP 255 (380)
T ss_pred CCCCCHHHHHHHHh-c------CCEEEEECcchhhcCC---cchHHHHHhCCCEEEEecchHhhcCccccceeeecC
Confidence 99999999999996 4 4899999999765321 111011111122355567889864 56778998753
No 195
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.68 E-value=3e-15 Score=137.69 Aligned_cols=202 Identities=13% Similarity=0.075 Sum_probs=153.2
Q ss_pred hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhc
Q 018437 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (356)
+|.+.+++.+.++.....|. -....+-+++..|.++..+++... .++++++|-.-++.++++++.++
T Consensus 40 pp~i~~Al~~rvdhGvfGY~--~~~~~~~~ai~~w~~~r~~~~i~~---e~i~~~p~VVpgi~~~I~~~T~~-------- 106 (388)
T COG1168 40 PPEIIEALRERVDHGVFGYP--YGSDELYAAIAHWFKQRHQWEIKP---EWIVFVPGVVPGISLAIRALTKP-------- 106 (388)
T ss_pred CHHHHHHHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHhcCCCCCc---ceEEEcCcchHhHHHHHHHhCcC--------
Confidence 47899999999876645554 244567889999999999998743 56889999888888888877553
Q ss_pred CCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC--CccccCHHHHHHHHhhC-ceEEEEecCCCccccc---CCHH
Q 018437 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE--GYYVMNPVKAVELVDEN-TICVAAILGSTLTGEF---EDVK 222 (356)
Q Consensus 149 g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~--~~~~~d~~~L~~~i~~~-~~~v~~~~~~~~tG~~---~~i~ 222 (356)
++.|++..|.|+.+.++.+..|-++...|+-+ +.+.||.++|++++.+. ++++++|+|+||+|.+ ++++
T Consensus 107 -----gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~ 181 (388)
T COG1168 107 -----GDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELR 181 (388)
T ss_pred -----CCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHH
Confidence 67899999999999999999999999999853 34888999999999764 6899999999999998 7899
Q ss_pred HHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccc-ccCCC-ceEEE-EcCCcCCCC-CcCeeEEEEeCCCC
Q 018437 223 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPL-VKSIN-VSGHKYGLV-YAGVGWVVWRTKDD 295 (356)
Q Consensus 223 ~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~-~Ds~~-~~~hK~l~~-P~g~g~l~~~~~~~ 295 (356)
+|.++|++| |+.+++|+.+.-.++.- ..+.++. +.... --+++ .++.|.+.. .-.|+.++..+++.
T Consensus 182 ~i~elc~kh------~v~VISDEIHaDlv~~g-~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~l 251 (388)
T COG1168 182 KIAELCLRH------GVRVISDEIHADLVLGG-HKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNREL 251 (388)
T ss_pred HHHHHHHHc------CCEEEeecccccccccC-CCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHH
Confidence 999999999 99999999988765521 0111111 11111 12333 446886443 45778888776544
No 196
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.68 E-value=1e-14 Score=135.75 Aligned_cols=303 Identities=11% Similarity=0.008 Sum_probs=201.1
Q ss_pred cccccccc-chhhhhcCC--CCCCCCCCCCHHHHHHHHHHHhhhcCCCCcccccc-cCCCChHHHH-HHHH--HHhcc-c
Q 018437 12 EILSSTFA-SRYVRAAIP--RFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASF-VTTWMEPECD-KLVM--ASINK-N 83 (356)
Q Consensus 12 ~~~~~~~~-~~~~~~~~~--~~~lp~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~v~-~~i~--~~~~~-~ 83 (356)
+||+++|. ..|..-+.. ...-...+.++.++++.++++...+......++.+ .....|+.+. .++. +++.. .
T Consensus 29 ~Sld~L~~~~IP~~Ir~~~~~~~~~~~~~sE~e~l~~l~~ia~kN~~~~sfiG~GyY~~~~P~vI~rnile~pewyTaYT 108 (450)
T COG0403 29 SSLDELFSQDIPPSIRKKLDTLLPLPKPLSEYEALAELKEIASKNKVFTSFIGAGYYDTYTPPVILRNILENPEWYTAYT 108 (450)
T ss_pred CCHHHHhhccCCHHHHhcccccCCCCCCCCHHHHHHHHHHHHhcCchhhhhccCcccCCcCcHHHHHHhhcCccccccCC
Confidence 67899999 777755532 22223445799999999999887665332223333 3334445555 3332 33433 4
Q ss_pred CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCC
Q 018437 84 YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANV 163 (356)
Q Consensus 84 ~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~ 163 (356)
+++|+.+++..+...+.+.++++|+|++. ++..+--++|.+--.++++.|.. + .+..+++++...
T Consensus 109 PYQpEISQGrLqaLfefQtlv~dLTGm~V-----ANASm~DeaTAaAEAm~ma~r~~-k---------~k~~~~~V~~~v 173 (450)
T COG0403 109 PYQPEISQGRLEALFEFQTLVADLTGLDV-----ANASMLDEATAAAEAMLMAKRVT-K---------KKRNKFLVPKDV 173 (450)
T ss_pred CCchhhhhHHHHHHHHHHHHHHHHhCCCc-----ccchhhhhHHHHHHHHHHHHHhh-c---------CcCceEEecCCC
Confidence 56677788999999999999999999996 23444456664443334433322 1 113689999999
Q ss_pred cchHHHHHHh----hCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCccc-ccCCHHHHHHHHHHhhhccCCC
Q 018437 164 QVCWEKFARY----FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG-EFEDVKLLHDLLTKKNEETGWD 238 (356)
Q Consensus 164 h~s~~~~~~~----~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG-~~~~i~~I~~i~~~~~~~~~~~ 238 (356)
|+.....++. +|++++.++.+ |.+.|+++.+.++.+|++.+|++. | ...|+++|.+.+|++ +
T Consensus 174 hpqt~~Vl~Tra~~~g~~i~~~~~~------d~~~l~~~~~~~~~gv~vQyP~~~-G~~~~d~~~l~~~~h~~------~ 240 (450)
T COG0403 174 HPQTLDVLRTRAEGLGIEIEVVDAD------DLDDLESADDGDVFGVLVQYPNTF-GIVEEDLRALIEAAHSA------G 240 (450)
T ss_pred CHHHHHHHHhhcccCceEEEEeccc------hhhhhhhccccCeEEEEEecCCCC-CccchhHHHHHHHHhhc------C
Confidence 9987766663 35566555544 778888883347899999999976 7 677899999999999 9
Q ss_pred CcEEEecccccccccccCCCCcccccCCCceEEEEcCCcC----CCCCcCeeEEEEeCCCCCccccccccCCCCCC----
Q 018437 239 TPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKY----GLVYAGVGWVVWRTKDDLPDELVFHINYLGSD---- 310 (356)
Q Consensus 239 ~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~----l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~---- 310 (356)
.+++|=+=--...+ +. ++-. .|+|.++-+++.+ +++.+.+|++.+|++ . .+.+ +..+-|.
T Consensus 241 al~~v~aDplaL~L--L~--pPGe---~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~-~-~R~m---PGRlVG~S~D~ 308 (450)
T COG0403 241 ALVIVAADPLALGL--LK--PPGE---FGADIVVGSAQRFGVPMGFGGPHAGYFAVKDE-F-KRQM---PGRLVGVSVDA 308 (450)
T ss_pred CEEEEEechhHhhc--cC--Cccc---cCCceEEecCcccCCCcCCCCcceeeeeEhHh-H-hhcC---CCceeeeeecC
Confidence 88777432111111 11 1222 3899999999987 344466889998864 2 2222 1111110
Q ss_pred --------------------CCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 311 --------------------QPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 311 --------------------~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
.-+. -.||-++..++..-.++.++|++|++++.++..+++.||+
T Consensus 309 ~G~~A~rLaLQTREQHIRReKATS-NICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la 372 (450)
T COG0403 309 AGKRAFRLALQTREQHIRREKATS-NICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLA 372 (450)
T ss_pred CCCchhhhhHHHHHHHHhhhccch-hhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 0011 1388888888888899999999999999999999999885
No 197
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.68 E-value=1.4e-15 Score=148.15 Aligned_cols=157 Identities=11% Similarity=0.074 Sum_probs=123.8
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchH---
Q 018437 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCW--- 167 (356)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~--- 167 (356)
|....+|+ .++++.|.+. .+++++|+.|+..++.++..+ +++||++.+.|...
T Consensus 63 p~~~~le~----~lA~l~g~~~-------al~~~SG~~Ai~~al~all~p-------------Gd~VIv~~~~y~~t~~~ 118 (427)
T PRK05994 63 PTNAVLEE----RVAALEGGTA-------ALAVASGHAAQFLVFHTLLQP-------------GDEFIAARKLYGGSINQ 118 (427)
T ss_pred ccHHHHHH----HHHHHhCCCc-------EEEEcCHHHHHHHHHHHHhCC-------------CCEEEEecCcchhHHHH
Confidence 44444554 5889998864 678899999999998877542 57899999988753
Q ss_pred -HHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecc
Q 018437 168 -EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (356)
Q Consensus 168 -~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a 246 (356)
...+...|++++.++++ |++++++++++++++|++++++||+|.+.|+++|.++|+++ ++++++|++
T Consensus 119 ~~~~~~~~G~~v~~vd~~------d~~~l~~ai~~~tklV~vesp~NptG~v~dl~~I~~la~~~------gi~livD~a 186 (427)
T PRK05994 119 FGHAFKSFGWQVRWADAD------DPASFERAITPRTKAIFIESIANPGGTVTDIAAIAEVAHRA------GLPLIVDNT 186 (427)
T ss_pred HHHHHHhcCcEEEEECCC------CHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEECC
Confidence 34466779998888753 78999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCcccccCCCceEEEEcCCcCCCCCcC-eeEEEEe
Q 018437 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG-VGWVVWR 291 (356)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g-~g~l~~~ 291 (356)
++.+.. .. +. ..++|.++.|.||+++++.+ .|.+++.
T Consensus 187 ~a~~~~--~~---pl---~~gaDivv~S~tK~lgg~~~~~gG~v~~ 224 (427)
T PRK05994 187 LASPYL--IR---PI---EHGADIVVHSLTKFLGGHGNSMGGIIVD 224 (427)
T ss_pred cccccc--CC---cc---ccCCcEEEEcCccccCCCCCcEEEEEEe
Confidence 975432 11 12 24899999999999977654 4544443
No 198
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.68 E-value=5.7e-16 Score=147.91 Aligned_cols=162 Identities=17% Similarity=0.041 Sum_probs=118.7
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~ 169 (356)
.|...++|+. ++++.|.+. .++++||++|+.+++. +..+ +++||++.+.|.....
T Consensus 53 ~p~~~~le~~----lA~leg~~~-------~v~~~sG~aAi~~~l~-~l~~-------------GD~VI~~~~~yg~~~~ 107 (364)
T PRK07269 53 NPTRAKLEET----LAAIESADY-------ALATSSGMSAIVLAFS-VFPV-------------GSKVVAVRDLYGGSFR 107 (364)
T ss_pred CccHHHHHHH----HHHHhCCCe-------EEEeCCHHHHHHHHHH-HhCC-------------CCEEEEecCCcCchHH
Confidence 4566666665 788887653 7899999999998884 3222 5789998877654333
Q ss_pred HHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccc
Q 018437 170 FARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (356)
Q Consensus 170 ~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~ 249 (356)
......-.- .+.+ .+..|+++++++++++|++|++++|+||+|.+.|+++|+++|+++ |+++++|++|+.
T Consensus 108 ~~~~~~~~~-~~~~---~~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~di~~I~~la~~~------gi~vvvD~t~~~ 177 (364)
T PRK07269 108 WFNQQEKEG-RFHF---TYANTEEELIAAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAHAK------GAKVIVDNTFYS 177 (364)
T ss_pred HHHHHHhcC-cEEE---EecCCHHHHHHhcCcCceEEEEECCCCCCCeeeCHHHHHHHHHHc------CCEEEEECCCcc
Confidence 222110000 1222 145689999999999999999999999999999999999999999 999999999765
Q ss_pred ccccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeCCC
Q 018437 250 FIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKD 294 (356)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~~~ 294 (356)
.+. .. +. ..++|.++.|.||++.++.+ .|+++.++++
T Consensus 178 ~~~--~~---pl---~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~ 216 (364)
T PRK07269 178 PIY--QR---PI---ELGADIVLHSATKYLSGHNDVLAGVVVTNDLE 216 (364)
T ss_pred ccc--CC---ch---hhCCcEEEecCceeccCCCcccceEEEeCcHH
Confidence 322 11 11 24899999999999987765 6877776544
No 199
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.68 E-value=5.8e-16 Score=148.77 Aligned_cols=158 Identities=15% Similarity=0.037 Sum_probs=119.7
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchH---
Q 018437 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCW--- 167 (356)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~--- 167 (356)
|....+|+ .++++.|.+. .+++++|+.|+..++ .+..+ +++|+++.+.|...
T Consensus 50 p~~~~Le~----~la~l~g~~~-------al~~~SG~~Al~~~l-~~l~p-------------Gd~Vi~~~~~y~~t~~~ 104 (380)
T PRK06176 50 PTRFALEE----LIADLEGGVK-------GFAFASGLAGIHAVF-SLFQS-------------GDHVLLGDDVYGGTFRL 104 (380)
T ss_pred hhHHHHHH----HHHHHhCCCC-------EEEECCHHHHHHHHH-HHcCC-------------CCEEEEcCCChhHHHHH
Confidence 44555554 4899998764 466677777876544 33321 57899999887643
Q ss_pred -HHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecc
Q 018437 168 -EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (356)
Q Consensus 168 -~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a 246 (356)
...+...|++++.++. .|++++++++++++++|++.+|+||+|.+.|+++|.++|+++ ++++++|++
T Consensus 105 ~~~~~~~~gi~v~~vd~------~d~e~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~------gi~vivD~t 172 (380)
T PRK06176 105 FDKVLVKNGLSCTIIDT------SDLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDH------GLLTIVDNT 172 (380)
T ss_pred HHHHHHhcCeEEEEcCC------CCHHHHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHHc------CCEEEEECC
Confidence 3445667888887764 278999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeCC
Q 018437 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTK 293 (356)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~~ 293 (356)
|+.+.. .. +. ..++|.++.|++|++.+|.+ .|+++.+++
T Consensus 173 ~a~~~~--~~---p~---~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~ 213 (380)
T PRK06176 173 FATPYY--QN---PL---LLGADIVVHSGTKYLGGHSDVVAGLVTTNNE 213 (380)
T ss_pred cccccc--CC---cc---ccCCCEEEecCceeccCCccceeeEEEecHH
Confidence 986432 11 12 24899999999999988764 677766554
No 200
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.68 E-value=4.3e-15 Score=145.10 Aligned_cols=176 Identities=12% Similarity=-0.042 Sum_probs=128.7
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH
Q 018437 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF 170 (356)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~ 170 (356)
+...++|+ .+++++|.+. .+++++||+|+..++.++...+.... + -..+++||++.++|.++..+
T Consensus 63 ~~~~~fe~----~lA~~~g~~~-------~v~~~sGt~al~~aL~al~~~~~~~~---~-~~pGd~VIv~~~t~~a~~~~ 127 (438)
T PRK15407 63 RFNDAFEK----KLAEFLGVRY-------ALLVNSGSSANLLAFSALTSPKLGDR---A-LKPGDEVITVAAGFPTTVNP 127 (438)
T ss_pred hhHHHHHH----HHHHHhCCCe-------EEEECCHHHHHHHHHHHHhhcccccc---C-CCCCCEEEECCCCcHHHHHH
Confidence 33445554 4888888863 78899999999999987643210000 0 01257899999999999999
Q ss_pred HHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccc
Q 018437 171 ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGF 250 (356)
Q Consensus 171 ~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~ 250 (356)
+...|++++.++++.+++.+|++.+++++++++++|++++ ++|...++++|.++|+++ ++++++|++|+.+
T Consensus 128 v~~~G~~pv~vdvd~~~~~id~~~le~~i~~~tkaVi~~~---~~G~p~dl~~I~~la~~~------gi~vIeDaa~a~G 198 (438)
T PRK15407 128 IIQNGLVPVFVDVELPTYNIDASLLEAAVSPKTKAIMIAH---TLGNPFDLAAVKAFCDKH------NLWLIEDNCDALG 198 (438)
T ss_pred HHHcCCEEEEEecCCCcCCcCHHHHHHHcCcCCeEEEEeC---CCCChhhHHHHHHHHHHC------CCEEEEECccchh
Confidence 9999999999999865689999999999999999998776 368888999999999999 9999999999865
Q ss_pred cccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCC
Q 018437 251 IAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (356)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~ 295 (356)
.. ..+..... ...+-.+++.+.|.+.+..| |+++++++++
T Consensus 199 ~~--~~g~~~G~--~gd~~~fSf~~~k~~~~geG-G~l~t~d~~l 238 (438)
T PRK15407 199 ST--YDGRMTGT--FGDIATLSFYPAHHITMGEG-GAVFTNDPLL 238 (438)
T ss_pred hh--cCCeeeec--cCceEEEeCCCCCCccccCc-eEEEECCHHH
Confidence 44 12211111 12233444455566655555 8888876544
No 201
>PRK06460 hypothetical protein; Provisional
Probab=99.67 E-value=8.4e-16 Score=147.55 Aligned_cols=157 Identities=15% Similarity=0.070 Sum_probs=115.4
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCC----cc
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANV----QV 165 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~----h~ 165 (356)
.+...++| +.+++++|.+. .+++++|++++..++.++..+ +++|+++.+. +.
T Consensus 44 ~p~~~~L~----~~lA~l~g~~~-------~v~~~sG~~ai~~~l~al~~~-------------Gd~Vl~~~~~~~~ty~ 99 (376)
T PRK06460 44 NPTVLELT----KKIVELENAEM-------GVAFSSGMGAISTTALALLKP-------------GNSVLVHRDMFGRSYR 99 (376)
T ss_pred CccHHHHH----HHHHHHhCCCc-------EEEeCCHHHHHHHHHHHHhCC-------------CCEEEEecCCcCcHHH
Confidence 34444454 55899999864 455567788988888776442 5788888654 44
Q ss_pred hHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEec
Q 018437 166 CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (356)
Q Consensus 166 s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~ 245 (356)
.+...++..|++++.++.++ .+.+++.+++++++|++++|+||+|.+.|+++|.++|+++ ++++++|+
T Consensus 100 ~~~~~~~~~G~~v~~~~~~~------~~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~------g~~vivDe 167 (376)
T PRK06460 100 FFTDYLKNWGVNVDASNPGS------DNIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCKEN------GSILIVDA 167 (376)
T ss_pred HHHHHHHhhCcEEEEECCCC------HHHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEEC
Confidence 46677788899988887643 2345565667899999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEE
Q 018437 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVW 290 (356)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~ 290 (356)
+|+.+.. .. +. ..++|.+..+++|+++++.+ .|+++.
T Consensus 168 a~~~~~~--~~---~l---~~~~divv~S~sK~l~G~~~~~~G~~~~ 206 (376)
T PRK06460 168 TFSTPIN--QK---PL---ELGADIVVHSASKFLAGHNDVIAGLAAG 206 (376)
T ss_pred CcCcccc--CC---hh---hcCCCEEEeecceeccCCCCceEEEEec
Confidence 9975321 11 11 23679999999999865432 677654
No 202
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.67 E-value=2.1e-15 Score=139.18 Aligned_cols=273 Identities=14% Similarity=0.073 Sum_probs=176.5
Q ss_pred HHHHHHHHHHhhhcCCCCcccccccCCCChHHHHHHHHHHhccc-----CCC--cccCcchHHHHHHHHHHHHHHhCCCC
Q 018437 40 EAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKN-----YVD--MDEYPVTTELQNRCVNMIAHLFNTPV 112 (356)
Q Consensus 40 ~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~i~~~~~~~-----~~~--~~~~~~~~~le~~~~~~la~l~g~~~ 112 (356)
.++.+.+++...+..+ .++|-. --+..++.+.+++.+-+.+. ++. |..-.-..++|..+.+...++||++.
T Consensus 12 ~~i~~~i~~e~~rq~~-~ieLIA-SEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~ 89 (413)
T COG0112 12 PEIFEAIQQELERQRE-HIELIA-SENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEY 89 (413)
T ss_pred HHHHHHHHHHHHHHhh-ceeeee-ccccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCc
Confidence 3456655555443322 222211 11234577888776554321 111 22223567899999999999999985
Q ss_pred CCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCC---CcchHHHHHHhhC--CeeEEEEecCCc
Q 018437 113 ADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN---VQVCWEKFARYFE--VELKEVKLEEGY 187 (356)
Q Consensus 113 ~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~---~h~s~~~~~~~~G--~~v~~v~~~~~~ 187 (356)
. -+-..+|+.||+.+++++.++ +++|+-.+. .|-+.-.-....| .+++..++|+++
T Consensus 90 a------nVQPhSGs~AN~av~~All~p-------------GDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et 150 (413)
T COG0112 90 A------NVQPHSGSQANQAVYLALLQP-------------GDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPET 150 (413)
T ss_pred c------ccCCCCchHHHHHHHHHHcCC-------------CCeEecccCCCCCcccCCCCCCccceeEEeEeccccccc
Confidence 2 244557899999999998764 567764443 3443332222223 457777888777
Q ss_pred cccCHHHHHHHHhh-CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCC
Q 018437 188 YVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLP 266 (356)
Q Consensus 188 ~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 266 (356)
+.+|.|++++.+.+ +|++|+ .|.+..-...|++++.++|++. |.+|.+|.|+-.++. .....+- .++
T Consensus 151 ~~IDyD~~~k~a~e~kPK~ii--~G~SaY~r~id~~~~reIad~V------GA~L~~DmAHiaGLV--A~G~~p~--P~~ 218 (413)
T COG0112 151 GLIDYDEVEKLAKEVKPKLII--AGGSAYSRPIDFKRFREIADEV------GAYLMVDMAHVAGLI--AGGVHPN--PLP 218 (413)
T ss_pred CccCHHHHHHHHHHhCCCEEE--ECccccccccCHHHHHHHHHHh------CceEEehHHHHHHHH--hcccCCC--CCC
Confidence 99999999998875 788776 3434434566899999999999 999999999754444 1222221 245
Q ss_pred CceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHH
Q 018437 267 LVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFIS 346 (356)
Q Consensus 267 ~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~ 346 (356)
.+|.++.+.||.+.+|.| |++++++.++. ..+.. .-+++ ++|-+-...+++...+++.....++++..++
T Consensus 219 ~AdvVTtTTHKTlrGPrG-G~Il~~~eel~-kkin~-aVFPg-------~qggpl~HviAakaVa~~Eal~p~fk~Ya~q 288 (413)
T COG0112 219 HADVVTTTTHKTLRGPRG-GIILTNDEELA-KKINS-AVFPG-------LQGGPLMHVIAAKAVAFKEALEPEFKEYAKQ 288 (413)
T ss_pred ccceEeCCcccCCCCCCc-eEEEeccHHHH-HHhhh-hcCCc-------cCCChHHHHHHHHHHHHHHHcChhHHHHHHH
Confidence 799999999999999998 78877763332 11110 11111 2233334557777888888888888888888
Q ss_pred HHhccCccc
Q 018437 347 SLKVCPFLV 355 (356)
Q Consensus 347 ~~~~a~~l~ 355 (356)
..++|+.|+
T Consensus 289 Vv~NAkaLA 297 (413)
T COG0112 289 VVKNAKALA 297 (413)
T ss_pred HHHHHHHHH
Confidence 888877664
No 203
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.67 E-value=1.9e-15 Score=146.38 Aligned_cols=201 Identities=12% Similarity=0.011 Sum_probs=143.0
Q ss_pred HHHHHHHHHHhcc-cCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhc
Q 018437 70 PECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (356)
Q Consensus 70 ~~v~~~i~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (356)
+.+.+++.+.... ....|....|..++++++.+++.+..+...+. +...+++|+|+++|+.+++.++..-
T Consensus 47 ~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~-~~i~v~iT~Ga~~al~~~~~~l~~~-------- 117 (396)
T PRK09257 47 RAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAA-GRVATVQTPGGTGALRVGADFLKRA-------- 117 (396)
T ss_pred HHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCccccc-CeEEEEecCCccHHHHHHHHHHHHh--------
Confidence 5677777776643 22346666788999999888887654432111 1112389999999999998655320
Q ss_pred CCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe-cCCccccCHHHHHHHHhh---CceEEEEecCCCcccccC---CH
Q 018437 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL-EEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFE---DV 221 (356)
Q Consensus 149 g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~~---~i 221 (356)
..+++|++++|+|+.+..+++..|++++.+|+ +++++.+|+++|++++.. +++++++++++||||.+- .+
T Consensus 118 ---~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~ 194 (396)
T PRK09257 118 ---FPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQW 194 (396)
T ss_pred ---CCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHH
Confidence 01579999999999999999999999999998 444589999999998863 356777799999999984 46
Q ss_pred HHHHHHHHHhhhccCCCCcEEEecccccccccccCCCC-c-cccc--CCCceEEEEcCCcCCCC-CcCeeEEEE
Q 018437 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-E-WDFR--LPLVKSINVSGHKYGLV-YAGVGWVVW 290 (356)
Q Consensus 222 ~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~-~~~~--~~~~Ds~~~~~hK~l~~-P~g~g~l~~ 290 (356)
++|.++|++| ++++++|.+|..+.... .... . ..+. .++ -.+..|+.|.++. ...+|++++
T Consensus 195 ~~l~~~a~~~------~~~ii~De~Y~~l~~~~-~~~~~~~~~~~~~~~~-vi~i~SfSK~~~~~GlRiG~~~~ 260 (396)
T PRK09257 195 DELAELLKER------GLIPFLDIAYQGFGDGL-EEDAYGLRAFAAAGLE-LLVASSFSKNFGLYGERVGALSV 260 (396)
T ss_pred HHHHHHHHhC------CcEEEEeccccccccch-HHHHHHHHHHHhcCCc-EEEEEEcCCcCccccccceeEEE
Confidence 7888999999 99999999998754210 0000 0 0111 112 2445668998764 688999874
No 204
>PRK05839 hypothetical protein; Provisional
Probab=99.67 E-value=9.7e-15 Score=140.33 Aligned_cols=211 Identities=11% Similarity=-0.009 Sum_probs=147.4
Q ss_pred CCCCcccccccCCC-ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHH
Q 018437 54 GNPRLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (356)
Q Consensus 54 ~~~~~~l~~~~~~~-~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~ 132 (356)
+++.++|..+.++. +++.+.+++.+... ....|....+..++++++.+++++.+|.+.+ ...+++|+|+++++..
T Consensus 23 ~~~~i~l~~~~p~~~~~~~~~~a~~~~~~-~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~---~~~I~it~G~~~al~~ 98 (374)
T PRK05839 23 EYKGLDLTIGEPQFETPKFIQDALKNNAH-LLNKYPKSAGEESLREAQRGFFKRRFKIELK---ENELIPTFGTREVLFN 98 (374)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHhh-ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCC---cceEEEecCcHHHHHH
Confidence 44556666555553 34677777765543 2334444557788999999999999886532 1458999999999887
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEEecC
Q 018437 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILG 211 (356)
Q Consensus 133 al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~ 211 (356)
++.++... ..++.|+++.|+|..+...++..|++++.+|+++ +.+.+|+++.+ + +++++|++++|
T Consensus 99 ~~~~~~~~-----------~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~~k~v~i~nP 164 (374)
T PRK05839 99 FPQFVLFD-----------KQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-QEVDLVILNSP 164 (374)
T ss_pred HHHHHhcC-----------CCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-ccccEEEEeCC
Confidence 77665320 1247899999999999999999999999999974 34777765432 3 46889999999
Q ss_pred CCcccccC---CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCc-ccc-------cCCCceEEEEcCCcC-C
Q 018437 212 STLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDF-------RLPLVKSINVSGHKY-G 279 (356)
Q Consensus 212 ~~~tG~~~---~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~-------~~~~~Ds~~~~~hK~-l 279 (356)
+||||++- .+++|.++|+++ ++++++|++|+.+... .+... ... ..++ -.+..|..|. +
T Consensus 165 ~NPTG~~~s~~~l~~i~~~~~~~------~~~ii~DE~Y~~~~~~--~~~~s~~~~~~~~~~~~~~~-vi~~~SfSK~~~ 235 (374)
T PRK05839 165 NNPTGRTLSLEELIEWVKLALKH------DFILINDECYSEIYEN--TPPPSLLEASILVGNESFKN-VLVINSISKRSS 235 (374)
T ss_pred CCCcCcccCHHHHHHHHHHHHHc------CCEEEeccchhhcccC--CCCCCHhhhhcccCccccCc-EEEEeccccccC
Confidence 99999984 466777888899 9999999999874321 01100 000 0012 1344568995 6
Q ss_pred CCCcCeeEEEEe
Q 018437 280 LVYAGVGWVVWR 291 (356)
Q Consensus 280 ~~P~g~g~l~~~ 291 (356)
.....+|+++..
T Consensus 236 ~~GlRiG~ii~~ 247 (374)
T PRK05839 236 APGLRSGFIAGD 247 (374)
T ss_pred CccceeEEEecC
Confidence 677899999863
No 205
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.67 E-value=3.2e-15 Score=146.37 Aligned_cols=191 Identities=14% Similarity=0.032 Sum_probs=138.1
Q ss_pred HHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcC
Q 018437 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQG 149 (356)
Q Consensus 70 ~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g 149 (356)
|.+.+++..... ....|....+..++++.+.+++.+..+.+ .++++|+|+++++.+++.++.++
T Consensus 101 p~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~------~~Iiit~G~~~al~~~~~~l~~p--------- 164 (431)
T PRK15481 101 PDLSRYFARLSR-TPRLYGDAPVSPELHAWAARWLRDDCPVA------FEIDLTSGAIDAIERLLCAHLLP--------- 164 (431)
T ss_pred HHHHHHHHHhhh-hhhhcCCcCCCHHHHHHHHHHHhhccCCc------CeEEEecCcHHHHHHHHHHhCCC---------
Confidence 455566554432 22334444455667776666655433211 24899999999999999887653
Q ss_pred CCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEe-cCCCcccccCCHH---HHH
Q 018437 150 KPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAI-LGSTLTGEFEDVK---LLH 225 (356)
Q Consensus 150 ~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~-~~~~~tG~~~~i~---~I~ 225 (356)
++.|++++|+|..+...++..|++++.||++++ .+|+++|++++++++++++++ +|+||||.+.+.+ +|.
T Consensus 165 ----gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~--g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~~~~~l~ 238 (431)
T PRK15481 165 ----GDSVAVEDPCFLSSINMLRYAGFSASPVSVDAE--GMQPEKLERALAQGARAVILTPRAHNPTGCSLSARRAAALR 238 (431)
T ss_pred ----CCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCC--CCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHHHHHHHH
Confidence 579999999999999999999999999999764 489999999998888888887 9999999997775 888
Q ss_pred HHHHHhhhccCCCCcEEEecccccccccccCCCCc-ccccCCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 226 DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 226 ~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
++|++++ ++|+++|++|+.+..+ +... .....++ -.+.-|+.|.++....+|+++..
T Consensus 239 ~la~~~~-----~~~ii~De~Y~~~~~~---~~~~~~~~~~~~-vi~~~SfSK~~~~GlRiG~~i~~ 296 (431)
T PRK15481 239 NLLARYP-----QVLVIIDDHFALLSSS---PYHSVIPQTTQR-WALIRSVSKALGPDLRLAFVASD 296 (431)
T ss_pred HHHHhcC-----CceEEecCchhhhccC---CCCCCCcCCCCC-EEEEeeeccccCCCceeEEEeCC
Confidence 9998873 7899999999876431 1111 1111111 24455689988766788988753
No 206
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.67 E-value=7.1e-16 Score=147.66 Aligned_cols=157 Identities=16% Similarity=0.087 Sum_probs=120.7
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----
Q 018437 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC---- 166 (356)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s---- 166 (356)
|....+| +.++++.|.+. .++++||++|+..++ .+..+ +++|+++.+.|.+
T Consensus 52 pt~~~le----~~la~l~g~~~-------~~~~~sG~~ai~~~~-~ll~~-------------Gd~Vl~~~~~y~~t~~~ 106 (366)
T PRK08247 52 PTRGVLE----QAIADLEGGDQ-------GFACSSGMAAIQLVM-SLFRS-------------GDELIVSSDLYGGTYRL 106 (366)
T ss_pred chHHHHH----HHHHHHhCCCc-------EEEEcCHHHHHHHHH-HHhCC-------------CCEEEEecCCcCcHHHH
Confidence 3444555 45999999975 578888998887654 33221 5789999998875
Q ss_pred HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecc
Q 018437 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (356)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a 246 (356)
+...+...|++++.++. .|++++++++++++++|++++|+||+|.+.|+++|.++|+++ ++++++|++
T Consensus 107 ~~~~~~~~G~~v~~vd~------~d~~~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~~~------g~~lIvD~t 174 (366)
T PRK08247 107 FEEHWKKWNVRFVYVNT------ASLKAIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKH------GLLLIVDNT 174 (366)
T ss_pred HHHHhhccCceEEEECC------CCHHHHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHHHc------CCEEEEECC
Confidence 34455668998888864 278999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeC
Q 018437 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRT 292 (356)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~ 292 (356)
|+..+. .. +. ..++|.+..|.+|+++++.+ .|+++.++
T Consensus 175 ~~~~~~--~~---p~---~~g~di~i~S~sK~~~g~~d~~~G~iv~~~ 214 (366)
T PRK08247 175 FYTPVL--QR---PL---EEGADIVIHSATKYLGGHNDVLAGLVVAKG 214 (366)
T ss_pred Cccccc--cC---ch---hcCCcEEEeecceeccCCCceeeeEEecCh
Confidence 965332 11 11 13789999999999977654 56666543
No 207
>PRK15029 arginine decarboxylase; Provisional
Probab=99.67 E-value=1.5e-15 Score=154.78 Aligned_cols=169 Identities=16% Similarity=0.060 Sum_probs=135.9
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCC
Q 018437 97 QNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEV 176 (356)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~ 176 (356)
-.+..+..|++||.+. .-.+++|+|.+|..++.+++.+ +++|+++..+|-|+.+++.+.|+
T Consensus 207 I~eAq~~aA~~fgA~~------t~FlvNGST~gn~a~i~a~~~~-------------gd~Vlv~RN~HKSv~~al~L~ga 267 (755)
T PRK15029 207 FGESEKYAARVFGADR------SWSVVVGTSGSNRTIMQACMTD-------------NDVVVVDRNCHKSIEQGLILTGA 267 (755)
T ss_pred HHHHHHHHHHHhCCCc------EEEEeCChhHHHHHHHHHhcCC-------------CCEEEeecccHHHHHHHHHHcCC
Confidence 3466777999999985 2578889999999888887653 67999999999999999999999
Q ss_pred eeEEEEecCCc----cccC-----HHHHHHHHhhC--ce--------EEEEecCCCcccccCCHHHHHHHHHHhhhccCC
Q 018437 177 ELKEVKLEEGY----YVMN-----PVKAVELVDEN--TI--------CVAAILGSTLTGEFEDVKLLHDLLTKKNEETGW 237 (356)
Q Consensus 177 ~v~~v~~~~~~----~~~d-----~~~L~~~i~~~--~~--------~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~ 237 (356)
.+++++...+. +.++ ++.++++|.+. .+ ++++++||.. |.+.|+++|+++|+++
T Consensus 268 ~Pvyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~-Gv~~di~~I~~~~h~~------ 340 (755)
T PRK15029 268 KPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYD-GVCYNAKEAQDLLEKT------ 340 (755)
T ss_pred eEEEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCc-ceeeCHHHHHHHHHhc------
Confidence 99999754211 3445 89999999652 23 8999999887 9999999999999999
Q ss_pred CCcEEEecccccccccccCCCCc--ccc-----cCCCce-EEEEcCCcCCCCCcCeeEEEEeCC
Q 018437 238 DTPIHVDAASGGFIAPFLYPDLE--WDF-----RLPLVK-SINVSGHKYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 238 ~~~l~vD~a~~~~~~~~~~~~~~--~~~-----~~~~~D-s~~~~~hK~l~~P~g~g~l~~~~~ 293 (356)
+++++||+|+|+.+. +.+..+ .-+ ...|+| .++-|.||.+.+-..++++.+++.
T Consensus 341 ~~~llvDEAhGah~~--F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~ 402 (755)
T PRK15029 341 SDRLHFDEAWYGYAR--FNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG 402 (755)
T ss_pred CCeEEEECccccccc--cCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCC
Confidence 999999999998654 333222 112 115788 888999999999999999999764
No 208
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.67 E-value=2.2e-15 Score=146.60 Aligned_cols=154 Identities=18% Similarity=0.121 Sum_probs=122.6
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----HHHHHHhh
Q 018437 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYF 174 (356)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s----~~~~~~~~ 174 (356)
++.+.+++++|.+. .+++++|++|+..++.++..+ +++|+++.+.|.. +...++..
T Consensus 61 ~le~~lA~l~g~~~-------~v~~~sG~~Ai~~al~~l~~~-------------Gd~Vl~~~~~y~~t~~~~~~~~~~~ 120 (418)
T TIGR01326 61 VLEQRIAALEGGVA-------ALAVASGQAAITYAILNLAQA-------------GDNIVSSSYLYGGTYNLFKHTLKRL 120 (418)
T ss_pred HHHHHHHHHhCCCe-------EEEEccHHHHHHHHHHHHhCC-------------CCEEEEECCCcHHHHHHHHHHHHHc
Confidence 44555999999754 689999999999998877542 5789998887744 44556778
Q ss_pred CCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccc
Q 018437 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (356)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (356)
|++++.++.+ |++++++++++++++|++.+++||+|.+.|+++|.++|+++ ++++++|++|+.+..
T Consensus 121 G~~v~~v~~~------d~~~l~~~l~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~------~i~livD~t~~~~~~-- 186 (418)
T TIGR01326 121 GIEVRFVDPD------DPEEFEKAIDENTKAVFAETIGNPAINVPDIEAIAEVAHAH------GVPLIVDNTFATPYL-- 186 (418)
T ss_pred CcEEEEECCC------CHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEECCCchhhc--
Confidence 9998888742 78999999998999999999999999999999999999999 999999999975422
Q ss_pred cCCCCcccccCCCceEEEEcCCcCCCCC-cCeeEEEEeC
Q 018437 255 LYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVGWVVWRT 292 (356)
Q Consensus 255 ~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~g~g~l~~~~ 292 (356)
.. +. ..++|.++.|++|+++++ ...|.+++..
T Consensus 187 ~~---~l---~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 187 CR---PI---DHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred CC---ch---hcCCeEEEECccccccCCccceEEEEEec
Confidence 11 11 237899999999998653 3467777754
No 209
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.67 E-value=5.6e-15 Score=143.66 Aligned_cols=221 Identities=11% Similarity=-0.016 Sum_probs=151.2
Q ss_pred HHHHHHHHHHHhhhcCCC-CcccccccCCC-ChHHHHHHHHHHhcc-----cCCCcccCcchHHHHHHHHHHHHHHhCCC
Q 018437 39 KEAAYQVINDELMLDGNP-RLNLASFVTTW-MEPECDKLVMASINK-----NYVDMDEYPVTTELQNRCVNMIAHLFNTP 111 (356)
Q Consensus 39 ~~~i~~~~~~~~~~~~~~-~~~l~~~~~~~-~~~~v~~~i~~~~~~-----~~~~~~~~~~~~~le~~~~~~la~l~g~~ 111 (356)
..++.+.+++....+..+ .++|+.+.+.. +++.+.+++.+++.. ....|...++...+++.+.+++.+..|++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~ 96 (409)
T PRK07590 17 FPEIARRVNAFREANPEAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCD 96 (409)
T ss_pred HHHHHHHHHHHhhhcCCCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCc
Confidence 455655555544333222 34666666554 346778887776653 22345566788899999998888777765
Q ss_pred CCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCe-----------eEE
Q 018437 112 VADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE-----------LKE 180 (356)
Q Consensus 112 ~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~-----------v~~ 180 (356)
.+. .++++|+|+++++.+.+ .+..+ +++|+++.|+|..+...++..|.. ++.
T Consensus 97 ~~~---~~I~it~Ga~~al~~l~-~~~~~-------------gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 159 (409)
T PRK07590 97 ISA---DEIFISDGAKCDTGNIL-DIFGP-------------DNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVY 159 (409)
T ss_pred CCh---hhEEECCCHHHHHHHHH-HhcCC-------------CCEEEEeCCCCcchHHHHHHcCCcccccccccccceeE
Confidence 422 45899999999987643 33221 578999999999999999999987 888
Q ss_pred EEecCC-ccccCHHHHHHHHhhCceEEEEecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccC
Q 018437 181 VKLEEG-YYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY 256 (356)
Q Consensus 181 v~~~~~-~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~ 256 (356)
+|++++ .+..|.+ ++++++|++++|+||||.+-+ +++|.++|+++ ++++++|++|+.+...
T Consensus 160 v~~~~~~~~~~d~~------~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~------~~~iI~De~Y~~~~~~--- 224 (409)
T PRK07590 160 LPCTAENNFVPELP------EEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKEN------GSLILFDAAYEAFISD--- 224 (409)
T ss_pred eecccccCCcccCc------ccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHc------CeEEEEEccchhhccC---
Confidence 998743 3555532 157889999999999999854 56788889999 9999999999875431
Q ss_pred CCCccccc-CCCc---eEEEEcCCcCCC-CCcCeeEEEEe
Q 018437 257 PDLEWDFR-LPLV---KSINVSGHKYGL-VYAGVGWVVWR 291 (356)
Q Consensus 257 ~~~~~~~~-~~~~---Ds~~~~~hK~l~-~P~g~g~l~~~ 291 (356)
......+. ..+. -.+.-|+.|.++ ....+|+++..
T Consensus 225 ~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~ 264 (409)
T PRK07590 225 PSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVP 264 (409)
T ss_pred CCCCcchhhCCCcccceEEEecCccccCCcCceeEEEEcC
Confidence 11111111 2221 123457899874 66789999874
No 210
>PRK08175 aminotransferase; Validated
Probab=99.66 E-value=1.5e-14 Score=140.05 Aligned_cols=207 Identities=13% Similarity=0.021 Sum_probs=146.1
Q ss_pred cccccccCCC-ChHHHHHHHHHHhcc-cCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHH
Q 018437 58 LNLASFVTTW-MEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (356)
Q Consensus 58 ~~l~~~~~~~-~~~~v~~~i~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (356)
++|..+.+.. +++.+.+.+.+.+.. ....|....+..++++++.+++.+.+|.+.+. ...+++|+|+++++...+.
T Consensus 32 i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~--~~~i~~t~G~~~~l~~~~~ 109 (395)
T PRK08175 32 IDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDP--ESEAIVTIGSKEGLAHLML 109 (395)
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCcEEEccCcHHHHHHHHH
Confidence 3444444433 234455555554432 23445556688899999999999888875421 1248899999999988777
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh---CceEEEEecCC
Q 018437 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGS 212 (356)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~ 212 (356)
++.++ +++|+++.|+|..+...++..|++++.||++++ ..++++|+++++. ++++|++++|+
T Consensus 110 ~~~~~-------------gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~l~~~l~~~~~~~~~v~i~~p~ 174 (395)
T PRK08175 110 ATLDH-------------GDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEG--VDFFNELERAIRESYPKPKMMILGFPS 174 (395)
T ss_pred HhCCC-------------CCEEEEcCCCCcchHHHHHHcCCeEEEEecccC--CCcHHHHHHHHhhccCCceEEEEeCCC
Confidence 66432 579999999999988888999999999999753 3357888888863 68899999999
Q ss_pred CcccccCCH---HHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CC---CceEEEEcCCcCCCCC-cC
Q 018437 213 TLTGEFEDV---KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LP---LVKSINVSGHKYGLVY-AG 284 (356)
Q Consensus 213 ~~tG~~~~i---~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~---~~Ds~~~~~hK~l~~P-~g 284 (356)
||||.+-+. ++|.++|+++ ++++++|.+|+.+... +.....+. .+ ....+..+..|.++.| ..
T Consensus 175 NPtG~~~~~~~~~~i~~~a~~~------~i~ii~De~y~~l~~~---~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlR 245 (395)
T PRK08175 175 NPTAQCVELEFFEKVVALAKRY------DVLVVHDLAYADIVYD---GWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWR 245 (395)
T ss_pred CCCCCCCCHHHHHHHHHHHHHc------CcEEEEecchHhhccC---CCCCcchhcCCCcccCEEEEeeccccccCcchh
Confidence 999998776 7899999999 9999999999865431 11111111 11 2224457789987533 56
Q ss_pred eeEEEE
Q 018437 285 VGWVVW 290 (356)
Q Consensus 285 ~g~l~~ 290 (356)
+|+++.
T Consensus 246 iG~~~~ 251 (395)
T PRK08175 246 IGFMVG 251 (395)
T ss_pred heeeeC
Confidence 888865
No 211
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.66 E-value=5.4e-15 Score=143.89 Aligned_cols=150 Identities=18% Similarity=0.081 Sum_probs=115.1
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~ 169 (356)
.|....+|+ .++++.|.+. .+++++|++|+..++.++..+ +++|+++.+.|.....
T Consensus 57 ~pt~~~Le~----~lA~l~g~~~-------~l~~ssG~~Ai~~al~al~~~-------------Gd~Vl~~~~~Y~~t~~ 112 (425)
T PRK06084 57 NPTNDVLEQ----RVAALEGGVG-------ALAVASGMAAITYAIQTIAEA-------------GDNIVSVAKLYGGTYN 112 (425)
T ss_pred CchHHHHHH----HHHHHhCCCc-------eeEehhHHHHHHHHHHHHhCC-------------CCEEEEeCCCcchHHH
Confidence 345455554 4888888653 578889999999999887543 5789998887764333
Q ss_pred HHH----hhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEec
Q 018437 170 FAR----YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (356)
Q Consensus 170 ~~~----~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~ 245 (356)
.+. ..|+++.+++. .|+++|++++++++++|++++|+||+|.+.|+++|.++|+++ ++++++|+
T Consensus 113 ~~~~~l~~~gi~v~~~d~------~d~e~le~ai~~~tklV~lesp~NPtG~v~dl~~I~~la~~~------~i~vVvD~ 180 (425)
T PRK06084 113 LLAHTLPRIGIETRFAAH------DDIAALEALIDERTKAVFCESIGNPAGNIIDIQALADAAHRH------GVPLIVDN 180 (425)
T ss_pred HHHHhcccceeEEEEECC------CCHHHHHHHhccCCcEEEEeCCCCCCCeecCHHHHHHHHHHc------CCEEEEEC
Confidence 332 24666655542 389999999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCcccccCCCceEEEEcCCcCCCCCc
Q 018437 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA 283 (356)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~ 283 (356)
+++.+.. .. +. ..++|.+..|.|||++++.
T Consensus 181 a~a~~~~--~~---p~---~~gaDivv~S~tK~l~G~g 210 (425)
T PRK06084 181 TVATPVL--CR---PF---EHGADIVVHSLTKYIGGHG 210 (425)
T ss_pred CCccccc--CC---hh---hcCCCEEEECchhcccccc
Confidence 9985433 11 11 2379999999999997763
No 212
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.66 E-value=4.2e-15 Score=142.88 Aligned_cols=197 Identities=15% Similarity=0.036 Sum_probs=142.6
Q ss_pred CChHHHHHHHHHHhccc--CCCcccCcchHHHHHHHHHHHHHHhC----CCCCCCCCCCeEEeCChhHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKN--YVDMDEYPVTTELQNRCVNMIAHLFN----TPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~--~~~~~~~~~~~~le~~~~~~la~l~g----~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~ 140 (356)
++++.+.+++.++++.+ ...|. .++..++++++.+++.+.+| +++ ..+++|+|+++++..++.+....
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~Y~-~~G~~~Lr~aia~~~~~~~~~~~~v~~-----~~I~it~Ga~~al~~~~~~~~~~ 114 (374)
T PRK02610 41 DLPPDLKQKLAWLYQQGIESNRYP-DGGHEALKQAIAEYVNESAAGSSQITP-----ANISVGNGSDELIRSLLIATCLG 114 (374)
T ss_pred CCCHHHHHHHHHHHhhcccccCCC-CCchHHHHHHHHHHhCccccccCCCCH-----HHEEEcCChHHHHHHHHHHHcCC
Confidence 34568888887766543 22332 35777888887777776543 333 34889999999998777665432
Q ss_pred HHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHh----hCceEEEEecCCCccc
Q 018437 141 WQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTG 216 (356)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~----~~~~~v~~~~~~~~tG 216 (356)
.++.|+++.|+|..+...++..|++++.++++++++.+|+++|+++++ +++++|+++.|+||||
T Consensus 115 ------------g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG 182 (374)
T PRK02610 115 ------------GEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTG 182 (374)
T ss_pred ------------CCCeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCC
Confidence 123799999999999999999999999999876558999999999987 3789999999999999
Q ss_pred ccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCC-CCCcCeeEEEEe
Q 018437 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYG-LVYAGVGWVVWR 291 (356)
Q Consensus 217 ~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l-~~P~g~g~l~~~ 291 (356)
.+.+.+++.++++-. + ++++++|++|..+.. . . ....+. .+++ .+.-|+.|.+ .....+|+++..
T Consensus 183 ~~~s~~~l~~l~~~~-~----~~~iI~De~Y~~~~~--~-~-~~~~~~~~~~~-ivi~SfSK~~g~~GlRiG~~v~~ 249 (374)
T PRK02610 183 NPLTAAELEWLRSLP-E----DILVVIDEAYFEFSQ--T-T-LVGELAQHPNW-VILRTFSKAFRLAAHRVGYAIGH 249 (374)
T ss_pred CCCCHHHHHHHHhcc-C----CcEEEEeccccccCc--c-c-hHHHHhcCCCE-EEEEecchhccCcccceeeeecC
Confidence 998888877776421 1 799999999986532 0 0 001111 1122 3456789987 566889999863
No 213
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.66 E-value=6.1e-16 Score=147.37 Aligned_cols=166 Identities=16% Similarity=0.072 Sum_probs=127.9
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCe
Q 018437 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE 177 (356)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~ 177 (356)
.++++++++.+|++++ .+++|+|+++++.+++.++..+ +++.|+++.|+|..|...++..|++
T Consensus 60 ~~l~~~~a~~~g~~~~-----~I~~~~Gs~e~i~~~~~~~~~~------------g~~~vli~~P~y~~y~~~~~~~G~~ 122 (351)
T PRK01688 60 KAVIENYAAYAGVKPE-----QVLVSRGADEGIELLIRAFCEP------------GKDAILYCPPTYGMYSVSAETIGVE 122 (351)
T ss_pred HHHHHHHHHHhCCCHH-----HEEEcCCHHHHHHHHHHHhcCC------------CCCEEEEcCCCHHHHHHHHHHcCCE
Confidence 3677789999999873 4899999999999998876432 1268999999999999999999999
Q ss_pred eEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCC
Q 018437 178 LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP 257 (356)
Q Consensus 178 v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~ 257 (356)
++.+|++++ +.+|++++++++ +++++|++++||||||.+.+.+++.++++..++ +.++++|++|..+.. .
T Consensus 123 ~~~v~~~~~-~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~----~~~vivDEay~~f~~----~ 192 (351)
T PRK01688 123 IRTVPTLDN-WQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQDLRTLLELTRG----KAIVVADEAYIEFCP----Q 192 (351)
T ss_pred EEEeecCCC-CCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCC----CcEEEEECchhhcCC----C
Confidence 999999864 899999999988 578999999999999999999999888886532 578999999976532 1
Q ss_pred CCcccc-c-CCCceEEEEcCCcCCC-CCcCeeEEEEe
Q 018437 258 DLEWDF-R-LPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (356)
Q Consensus 258 ~~~~~~-~-~~~~Ds~~~~~hK~l~-~P~g~g~l~~~ 291 (356)
....++ . .+. -.+.-++.|+++ ++..+|+++..
T Consensus 193 ~s~~~~~~~~~n-~iv~rSfSK~~glaGlRiGy~i~~ 228 (351)
T PRK01688 193 ASLAGWLAEYPH-LVILRTLSKAFALAGLRCGFTLAN 228 (351)
T ss_pred CChHHHHhhCCC-EEEEecchHhhcCHHHHHhHHhCC
Confidence 000111 1 122 234456889764 44567888764
No 214
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.66 E-value=2.9e-15 Score=148.59 Aligned_cols=180 Identities=14% Similarity=0.017 Sum_probs=137.3
Q ss_pred cccCcchHHHHHHHHHHHHHHhC----CCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCC
Q 018437 87 MDEYPVTTELQNRCVNMIAHLFN----TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN 162 (356)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g----~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~ 162 (356)
|....|..++++++.+++.+.+| +++ ..+++|+|+++++.+++.++.++ ++.|+++.|
T Consensus 90 y~~~~G~~~LR~aiA~~l~~~~g~~v~v~p-----e~Ivit~Ga~~al~~l~~~l~~p-------------GD~Vlv~~P 151 (496)
T PLN02376 90 FQDYHGLKKFRQAIAHFMGKARGGKVTFDP-----ERVVMSGGATGANETIMFCLADP-------------GDVFLIPSP 151 (496)
T ss_pred cCCCCCcHHHHHHHHHHHHHHhCCCCcCCh-----hhEEEccchHHHHHHHHHHhCCC-------------CCEEEECCC
Confidence 34456888999999999998888 444 35899999999999999988653 578999999
Q ss_pred CcchHHHHHH-hhCCeeEEEEecC-CccccCHHHHHHHHh------hCceEEEEecCCCcccccCC---HHHHHHHHHHh
Q 018437 163 VQVCWEKFAR-YFEVELKEVKLEE-GYYVMNPVKAVELVD------ENTICVAAILGSTLTGEFED---VKLLHDLLTKK 231 (356)
Q Consensus 163 ~h~s~~~~~~-~~G~~v~~v~~~~-~~~~~d~~~L~~~i~------~~~~~v~~~~~~~~tG~~~~---i~~I~~i~~~~ 231 (356)
+|..+...+. ..|++++.||++. +++.+|++++++++. .++++|++++|+||||.+-+ +++|.++|+++
T Consensus 152 ~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~ 231 (496)
T PLN02376 152 YYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRK 231 (496)
T ss_pred CccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHc
Confidence 9999998887 4799999999964 348999999987642 36788999999999999965 56788899999
Q ss_pred hhccCCCCcEEEecccccccccccCCCCccccc-C----C----Cce--EEEEcCCcCCC-CCcCeeEEEEeCC
Q 018437 232 NEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-L----P----LVK--SINVSGHKYGL-VYAGVGWVVWRTK 293 (356)
Q Consensus 232 ~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~----~----~~D--s~~~~~hK~l~-~P~g~g~l~~~~~ 293 (356)
++++++|++|+.++.. .+. ...+. + . ..+ .+..+..|.++ ....+|+++..++
T Consensus 232 ------~i~lI~DEiY~~~~f~--~~~-~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~ 296 (496)
T PLN02376 232 ------NIHLVVDEIYAATVFA--GGD-FVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFND 296 (496)
T ss_pred ------CCEEEEEcCccccccC--CCC-cccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCH
Confidence 9999999999875431 111 01110 0 0 112 23568999875 5689999987543
No 215
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.65 E-value=4.1e-15 Score=141.44 Aligned_cols=257 Identities=13% Similarity=0.044 Sum_probs=149.8
Q ss_pred CChHHHHHHHHHHhcccCC--Cc-----ccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYV--DM-----DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~--~~-----~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~ 139 (356)
..+|.+.+++.+.+..... +| ..-....++|..+.+.+.++||+++++ ....+-..+|+.||+.++.++.+
T Consensus 31 ~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~--w~anvqp~SGs~An~av~~aLl~ 108 (399)
T PF00464_consen 31 YMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKE--WYANVQPHSGSQANLAVYMALLK 108 (399)
T ss_dssp ---HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTT--EEEE---SSHHHHHHHHHHHHT-
T ss_pred ccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCccc--ceEEeecCCchHHHHHHHHHHHh
Confidence 3457888888766553221 11 112355789999999999999999632 23345666899999999999876
Q ss_pred HHHHHHHhcCCCCCCCeEEecCC---CcchHHHHHHh-------hCCeeEEEEecCCccccCHHHHHHHHhh-CceEEEE
Q 018437 140 KWQQKRKEQGKPYDKPNIVTGAN---VQVCWEKFARY-------FEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAA 208 (356)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~s~~---~h~s~~~~~~~-------~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~ 208 (356)
+ +++|+.-+. .|.+....... ...+++..++|++++.+|.+++++.+.+ +|++|++
T Consensus 109 p-------------GD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~ 175 (399)
T PF00464_consen 109 P-------------GDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIIC 175 (399)
T ss_dssp T-------------T-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEE
T ss_pred h-------------cCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEE
Confidence 4 567775443 35443322222 3456788888876799999999999875 7888775
Q ss_pred ecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEE
Q 018437 209 ILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWV 288 (356)
Q Consensus 209 ~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l 288 (356)
-..+.+ ...|++++.++|++. |.++++|.++-.+.. .....+-- ++.+|.++.+.||.+.+|.| |++
T Consensus 176 G~S~y~--~~~d~~~~reIad~v------ga~l~~D~sH~~GLI--a~g~~~~P--~~~ADvvt~sThKtl~GPrg-giI 242 (399)
T PF00464_consen 176 GASSYP--RPIDFKRFREIADEV------GAYLMADISHIAGLI--AGGLFPNP--FPYADVVTGSTHKTLRGPRG-GII 242 (399)
T ss_dssp E-SSTS--S---HHHHHHHHHHT------T-EEEEE-TTTHHHH--HTTSS--G--CCTSSEEEEESSGGG-SSS--EEE
T ss_pred Cchhcc--CccCHHHHHHHHHhc------CcEEEecccccccce--ehheecCc--cccceEEEeeccccccccCc-eEE
Confidence 544433 446899999999999 999999999855544 12222212 35699999999999999987 888
Q ss_pred EEeCCCCC--------ccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 289 VWRTKDDL--------PDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 289 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
++++...- ...+...... ..-+.++|......++++..+|+......++++.++..++|+.|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~l~~~I~~----avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La 313 (399)
T PF00464_consen 243 LTNKGSKNVDKKGKEIDEELAEKIDS----AVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALA 313 (399)
T ss_dssp EES-SEEEE-TTS-EEEHHHHHHHHH----HHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHH
T ss_pred EEcCCccccCCcccccHHHHHHHhcc----ccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 88722100 0000000000 001123345556567888888888666666677777777776654
No 216
>PRK03321 putative aminotransferase; Provisional
Probab=99.65 E-value=1.9e-15 Score=144.00 Aligned_cols=192 Identities=11% Similarity=-0.017 Sum_probs=137.8
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
+++.+.+++.+++.. ...|. .++... +++.+++++|+++ ..+++|+|+++++..++.+...+
T Consensus 36 ~~~~~~~a~~~~~~~-~~~y~-~~g~~~----lr~~ia~~~~~~~-----~~I~~~~G~~~~l~~~~~~~~~~------- 97 (352)
T PRK03321 36 PLPSVRAAIARAAAG-VNRYP-DMGAVE----LRAALAEHLGVPP-----EHVAVGCGSVALCQQLVQATAGP------- 97 (352)
T ss_pred CCHHHHHHHHHHHHh-cCcCC-CCcHHH----HHHHHHHHhCcCH-----HHEEECCCHHHHHHHHHHHhcCC-------
Confidence 456788888766542 22222 235444 4455788888765 34889999998888777655332
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHH
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDL 227 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i 227 (356)
+++|+++.+++..+...++..|++++.+|++++ +.+|++++++++++++++|++++|+||||.+.|.++|.++
T Consensus 98 ------gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l 170 (352)
T PRK03321 98 ------GDEVIFAWRSFEAYPILVQVAGATPVQVPLTPD-HTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAELARF 170 (352)
T ss_pred ------CCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCC-CCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHHHHHH
Confidence 578999999988888888999999999999864 7899999999998889999999999999999999999999
Q ss_pred HHHhhhccCCCCcEEEecccccccccccCCCCccccc--CCCceEEE-EcCCcCCC-CCcCeeEEEEe
Q 018437 228 LTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPLVKSIN-VSGHKYGL-VYAGVGWVVWR 291 (356)
Q Consensus 228 ~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~Ds~~-~~~hK~l~-~P~g~g~l~~~ 291 (356)
|+++.. ++++++|++|+.+... ......+. ...-+.++ .|..|.++ ....+|+++..
T Consensus 171 ~~~~~~----~~~ii~De~y~~~~~~---~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~ 231 (352)
T PRK03321 171 LDAVPA----DVLVVLDEAYVEYVRD---DDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGH 231 (352)
T ss_pred HHhCCC----CeEEEEechHHHhccC---cCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCC
Confidence 997411 8999999999875431 11111111 11123343 46789875 33458888764
No 217
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.65 E-value=4e-15 Score=142.56 Aligned_cols=193 Identities=13% Similarity=0.050 Sum_probs=137.0
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
+++.+.+++.+.... ...|... .. .++++.+++++|+++ ..+++|+|+++++...+.++.++
T Consensus 46 ~~~~~~~a~~~~~~~-~~~y~~~-~~----~~lr~~ia~~~~~~~-----~~i~~t~G~~~~l~~~~~~l~~~------- 107 (367)
T PRK02731 46 PSPKAIEAIRAAADE-LHRYPDG-SG----FELKAALAEKFGVDP-----ERIILGNGSDEILELLARAYLGP------- 107 (367)
T ss_pred CCHHHHHHHHHHHHh-hcCCCCC-cH----HHHHHHHHHHhCcCH-----HHEEEcCCHHHHHHHHHHHhcCC-------
Confidence 356777877766542 2222222 22 245566888888875 24889999999887777665432
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHH
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDL 227 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i 227 (356)
+++|+++.++|..+...++..|++++.+|.+ ++.+|+++|++++++++++|++++|+||||.+.+.++|.++
T Consensus 108 ------gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l 179 (367)
T PRK02731 108 ------GDEVIYSEHGFAVYPIAAQAVGAKPVEVPAK--DYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVERF 179 (367)
T ss_pred ------CCEEEEecCCHHHHHHHHHHcCCeEEEeccc--CCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHHHHHHH
Confidence 5789999999988888888899999999984 37899999999998889999999999999999999999999
Q ss_pred HHHhhhccCCCCcEEEecccccccccccCC-CCcccccCCCce-EEEEcCCcCCC-CCcCeeEEEEeC
Q 018437 228 LTKKNEETGWDTPIHVDAASGGFIAPFLYP-DLEWDFRLPLVK-SINVSGHKYGL-VYAGVGWVVWRT 292 (356)
Q Consensus 228 ~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~-~~~~~~~~~~~D-s~~~~~hK~l~-~P~g~g~l~~~~ 292 (356)
++.+.+ ++++++|++|..+... .. ....+.....-+ .+..+..|.++ .+..+|+++..+
T Consensus 180 ~~~~~~----~~~li~De~y~~~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~ 241 (367)
T PRK02731 180 LAGVPP----DVLVVLDEAYAEYVRR--KDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPP 241 (367)
T ss_pred HHhCCC----CcEEEEECcHHHhccC--cCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCH
Confidence 987521 8999999999764431 10 011111111112 33346778753 446789998753
No 218
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.65 E-value=1.4e-15 Score=139.43 Aligned_cols=189 Identities=16% Similarity=0.132 Sum_probs=128.2
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
.+.|++.+++..+-......|...+.+..+|+ ++++++|... +.|+++||+||.+++.+.+++
T Consensus 11 g~~~~m~eam~~a~~~~~~~YG~D~~~~~~e~----~~ae~~g~~a-------~~Fv~sGT~aN~lal~~~~~~------ 73 (342)
T COG2008 11 GPTPEMREALAAANAVGDDVYGEDPTTNALEQ----RIAELFGKEA-------ALFVPSGTQANQLALAAHCQP------ 73 (342)
T ss_pred CCCHHHHHHHHhccccCCCCCCCCHHHHHHHH----HHHHHhCCce-------EEEecCccHHHHHHHHHhcCC------
Confidence 44578888887653233334566666655554 4889988843 899999999999999998764
Q ss_pred hcCCCCCCCeEEecCCCcchHHHHH--HhhCCeeEEEEe-cCCccccCHHHHHHHHhh-------CceEEEEecCCCccc
Q 018437 147 EQGKPYDKPNIVTGANVQVCWEKFA--RYFEVELKEVKL-EEGYYVMNPVKAVELVDE-------NTICVAAILGSTLTG 216 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~h~s~~~~~--~~~G~~v~~v~~-~~~~~~~d~~~L~~~i~~-------~~~~v~~~~~~~~tG 216 (356)
+..||+...+|.....+- +.++-. .++++ +..++.+++++|+.+|.+ .+.+++.+..+ ..|
T Consensus 74 -------~~~vi~~~~aHi~~~E~Ga~~~~~~~-~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~t-e~G 144 (342)
T COG2008 74 -------GESVICHETAHIYTDECGAPEFFGGG-QKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTAT-EGG 144 (342)
T ss_pred -------CCeEEEeccccceecccCcHHHHcCC-ceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccC-CCc
Confidence 468999999997654432 233322 23333 324599999999998863 24555555555 779
Q ss_pred ccC---CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEE
Q 018437 217 EFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (356)
Q Consensus 217 ~~~---~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~ 290 (356)
++- .|++|.++||++ +++||+|||=-+-.+..+.+. ..++ ..++|++++++.|.++.|.| ++++.
T Consensus 145 tVy~l~el~~i~~~~k~~------~l~LHmDGAR~~nA~valg~~-~~~~-~~~~D~v~~~~tK~g~~~~g-Aiv~g 212 (342)
T COG2008 145 TVYPLDELEAISAVCKEH------GLPLHMDGARLANALVALGVA-LKTI-KSYVDSVSFCLTKGGGAPVG-AIVFG 212 (342)
T ss_pred eecCHHHHHHHHHHHHHh------CCceeechHHHHHHHHHcCCC-HHHH-HhhCCEEEEecccCCcceee-eEEEc
Confidence 985 467788999999 999999998433223222211 1122 35899999999999987765 34433
No 219
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.65 E-value=2.3e-14 Score=136.05 Aligned_cols=204 Identities=16% Similarity=0.065 Sum_probs=141.0
Q ss_pred HHHHHHHHHHhhhcC-CCCcccccccCCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCC
Q 018437 40 EAAYQVINDELMLDG-NPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTA 118 (356)
Q Consensus 40 ~~i~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~ 118 (356)
++.++.+++....-| .|.. .|..-..+|.+.++..++++... +...+.+++.+.+++++|.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~---~ylgl~~~~~~~~~~~~~~~~~~-------g~~~~~~~Le~~lA~~~g~~~e----- 72 (346)
T TIGR03576 8 EKALEIIREKISRGGRDSLY---DLTGLAGGFKIDEEDLELLETYV-------GPAIFEEKVQELGREHLGGPEE----- 72 (346)
T ss_pred HHHHHHHHHHHhccCCcccc---ccccCCCChhHHHHHHHHHHHhc-------CCHHHHHHHHHHHHHHcCCCcc-----
Confidence 455666766655433 2322 33333445677777777765432 3457788888999999999652
Q ss_pred CeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEec---CCCcchHHHHHHhhCCeeEEEEecCCccccCHHHH
Q 018437 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTG---ANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKA 195 (356)
Q Consensus 119 ~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s---~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L 195 (356)
..++++||+++|..++.++.++ +++|+++ .+.|.++...+++.|+++... .|++++
T Consensus 73 ~ilv~~gg~~a~~~~~~al~~~-------------gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~~--------~~l~~l 131 (346)
T TIGR03576 73 KILVFNRTSSAILATILALEPP-------------GRKVVHYLPEKPAHPSIPRSCKLAGAEYFES--------DELSEL 131 (346)
T ss_pred eEEEECCHHHHHHHHHHHhCCC-------------CCEEEECCCCCCCchhHHHHHHHcCCEEecc--------CCHHHH
Confidence 3899999999999999887643 5677764 579999999999999875322 134444
Q ss_pred HHHHhhCceEEEEecCCCccccc---CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEE
Q 018437 196 VELVDENTICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSIN 272 (356)
Q Consensus 196 ~~~i~~~~~~v~~~~~~~~tG~~---~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~ 272 (356)
+. .+++++|+++ +++++|.+ .|+++|+++|+++ ++++++|+||+.++.... ... .....++|.++
T Consensus 132 ~~--~~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~------~~~livDEAy~~~~~~~~-~~~--~~~~~~~divv 199 (346)
T TIGR03576 132 KK--IDGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSK------EAIVLVDDASGARVRRLY-GQP--PALDLGADLVV 199 (346)
T ss_pred hh--CcCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHc------CCEEEEECCccccccccC-CCC--CHHHcCCcEEE
Confidence 33 2457777765 56888988 7899999999999 999999999987654211 111 11112568888
Q ss_pred EcCCcCCCCCcCeeEEEEeC
Q 018437 273 VSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 273 ~~~hK~l~~P~g~g~l~~~~ 292 (356)
.+.+|++.++. .|+++.++
T Consensus 200 ~s~SKalaG~r-~G~v~~~~ 218 (346)
T TIGR03576 200 TSTDKLMDGPR-GGLLAGRK 218 (346)
T ss_pred eccchhccccc-eEEEEeCH
Confidence 89999764554 58887643
No 220
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.65 E-value=2.1e-15 Score=146.45 Aligned_cols=186 Identities=13% Similarity=-0.006 Sum_probs=132.0
Q ss_pred CCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeE--EeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCC
Q 018437 85 VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGV--GTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN 162 (356)
Q Consensus 85 ~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~--~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~ 162 (356)
..|....|..++++++.+|+.+..+.+.+. ..++ .|.|+++|+..++.+++.-. ..+++|++++|
T Consensus 66 ~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~---~~v~~~~t~G~~~al~~~~~~l~~~~----------~~Gd~Vlv~~P 132 (404)
T PTZ00376 66 KEYLPIEGLQSFIEAAQKLLFGEASYALAE---KRIATVQALSGTGALRLGFEFLKRFL----------PAGTTVYVSNP 132 (404)
T ss_pred CCCCCCCCCHHHHHHHHHHhcCCCcccccc---CeEEEeeccCcchHHHHHHHHHHHhc----------CCCCEEEEcCC
Confidence 456667788999999888886554332111 2244 58899999888776443210 12579999999
Q ss_pred CcchHHHHHHhhCCeeEEEEec-CCccccCHHHHHHHHh---hCceEEEEecCCCcccccC---CHHHHHHHHHHhhhcc
Q 018437 163 VQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVD---ENTICVAAILGSTLTGEFE---DVKLLHDLLTKKNEET 235 (356)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~L~~~i~---~~~~~v~~~~~~~~tG~~~---~i~~I~~i~~~~~~~~ 235 (356)
+|+.+...++..|++++.+|+. ++++.+|++.+++++. ++++++++++|+||||.+- .+++|.++|++|
T Consensus 133 ~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~---- 208 (404)
T PTZ00376 133 TWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRK---- 208 (404)
T ss_pred CchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhC----
Confidence 9999999999999999999994 3358999999999985 3457788899999999984 567788899999
Q ss_pred CCCCcEEEecccccccccccCCCC--cccccCCCce-EEEEcCCcCCC-CCcCeeEEE
Q 018437 236 GWDTPIHVDAASGGFIAPFLYPDL--EWDFRLPLVK-SINVSGHKYGL-VYAGVGWVV 289 (356)
Q Consensus 236 ~~~~~l~vD~a~~~~~~~~~~~~~--~~~~~~~~~D-s~~~~~hK~l~-~P~g~g~l~ 289 (356)
++++++|.+|..+......... ...+....-. .+..|+.|.++ ....+|+++
T Consensus 209 --~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~ 264 (404)
T PTZ00376 209 --NLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALH 264 (404)
T ss_pred --CcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEE
Confidence 9999999999875431000000 0111111112 34456899877 568899985
No 221
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.65 E-value=1.2e-15 Score=145.66 Aligned_cols=163 Identities=18% Similarity=0.096 Sum_probs=125.7
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCee
Q 018437 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (356)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v 178 (356)
++++.+++.+|++++ .+++|+|+++++.+++.++..+ ++++|+++.|+|..|...++..|+++
T Consensus 64 ~Lr~aia~~~~~~~~-----~I~it~Gs~~~i~~~~~~~~~~------------g~d~vlv~~P~y~~y~~~~~~~g~~v 126 (354)
T PRK04635 64 ELINAYSAYAGVAPE-----QILTSRGADEAIELLIRAFCEP------------GQDSIACFGPTYGMYAISAETFNVGV 126 (354)
T ss_pred HHHHHHHHHhCcCHH-----HEEEeCCHHHHHHHHHHHhcCC------------CCCeEEEcCCChHHHHHHHHHcCCEE
Confidence 445557888899873 4899999999999998877542 12689999999999999999999999
Q ss_pred EEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCC
Q 018437 179 KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD 258 (356)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~ 258 (356)
+.+|++++ +.+|++.+++ + +++++|++++|+||||.+.+.+++.++++... ++++++|++|..+.. ..
T Consensus 127 ~~v~~~~~-~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~-----~~~vivDeay~~~~~----~~ 194 (354)
T PRK04635 127 KALPLTAD-YQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDRADIEQLIEMTP-----DAIVVVDEAYIEFCP----EY 194 (354)
T ss_pred EEEecCCC-CCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCC-----CcEEEEeCchHhhcc----Cc
Confidence 99999764 8999999873 4 67899999999999999999999999998752 689999999976432 11
Q ss_pred Cccccc--CCCceEEEEcCCcCCC-CCcCeeEEEEe
Q 018437 259 LEWDFR--LPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (356)
Q Consensus 259 ~~~~~~--~~~~Ds~~~~~hK~l~-~P~g~g~l~~~ 291 (356)
...++. .+++ .+.-+++|+++ ++..+|+++..
T Consensus 195 s~~~~~~~~~~~-iv~~S~SK~~~l~GlRlG~~i~~ 229 (354)
T PRK04635 195 SVADLLASYPNL-VVLRTLSKAFALAGARCGFTLAN 229 (354)
T ss_pred chHHHHhhCCCE-EEEechHHHhhhhHHHHhhhhCC
Confidence 111111 1222 34567999874 55668998764
No 222
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.64 E-value=4.7e-15 Score=142.33 Aligned_cols=195 Identities=14% Similarity=0.003 Sum_probs=141.3
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
+++.+.+++.+.... ...|....+ . ++++.+++++|+++ ..+++|+|+++++..++.++.++
T Consensus 50 ~~~~~~~al~~~~~~-~~~Y~~~~g-~----~lr~~ia~~~~~~~-----~~i~~t~G~~~~l~~~~~~~~~~------- 111 (371)
T PRK05166 50 PSPAVRRAFADIAEL-LRLYPDPQG-R----ALREAIAARTGVPA-----DRIILGNGSEDLIAVICRAVLRP------- 111 (371)
T ss_pred CCHHHHHHHHHHHHH-hhcCCCCcH-H----HHHHHHHHHhCcCH-----HHEEEcCCHHHHHHHHHHHhcCC-------
Confidence 456777777654432 222322222 2 45566888889875 34899999999998888776432
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHH
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDL 227 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i 227 (356)
+++|+++.|+|..+...++..|++++.++++++ +.+|+++|++++++++++|++++|+||||.+.+.+++.++
T Consensus 112 ------gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l 184 (371)
T PRK05166 112 ------GDRVVTLYPSFPLHEDYPTMMGARVERVTVTPD-LGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTADQLARV 184 (371)
T ss_pred ------CCEEEEcCCChHHHHHHHHHcCCeEEEeecCCC-CCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 578999999999999999999999999999864 8999999999998889999999999999999999988888
Q ss_pred HHHhhhccCCCCcEEEecccccccccccCCCCc-cc-ccCCC-ceEEEEcCCcCCC-CCcCeeEEEEeCC
Q 018437 228 LTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WD-FRLPL-VKSINVSGHKYGL-VYAGVGWVVWRTK 293 (356)
Q Consensus 228 ~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~-~~~~~-~Ds~~~~~hK~l~-~P~g~g~l~~~~~ 293 (356)
++...+ ++++++|++|+.+... .+... .. +.... --.+..|+.|.++ ....+|++++.++
T Consensus 185 ~~~~~~----~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~ 248 (371)
T PRK05166 185 LDATPP----ETLIVVDEAYAEYAAG--DDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDP 248 (371)
T ss_pred HHhCCC----CcEEEEECcHHHhcCC--cCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCH
Confidence 886421 7899999999875521 11111 11 11111 1234556899875 6678999877554
No 223
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.64 E-value=1.1e-14 Score=141.71 Aligned_cols=193 Identities=10% Similarity=-0.031 Sum_probs=127.9
Q ss_pred CCCChHHHHHHHHHHhcccCCCcc---cCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASINKNYVDMD---EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~~~~~~---~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~ 141 (356)
+-.++|.+.+++.++++....... ...+......++.+.+++++|.+. .++.++|++||..++.++...
T Consensus 58 ~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~~~-------~i~~~sG~~a~~~~i~~l~~~- 129 (410)
T PRK13392 58 GMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKES-------ALLFTSGYVSNDAALSTLGKL- 129 (410)
T ss_pred CCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCCCC-------EEEECcHHHHHHHHHHHHhcC-
Confidence 334567888888877754321111 111222233466677999999653 455556688888888755321
Q ss_pred HHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHh----hCceEEEEecCCCcccc
Q 018437 142 QQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTGE 217 (356)
Q Consensus 142 ~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~----~~~~~v~~~~~~~~tG~ 217 (356)
..++.|+++...|.++...++..|++++.++.+ |.+.+++.+. +++++|++++++|++|.
T Consensus 130 ----------~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~------d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~ 193 (410)
T PRK13392 130 ----------LPGCVILSDALNHASMIEGIRRSGAEKQVFRHN------DLADLEEQLASVDPDRPKLIAFESVYSMDGD 193 (410)
T ss_pred ----------CCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC------CHHHHHHHHHhccCCCCEEEEEeCCCCCCcc
Confidence 013578887789999888888889988766532 3444555443 47889999999999999
Q ss_pred cCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccc-cc-CCCceEEEEcCCcCCCCCcCeeEEEE
Q 018437 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FR-LPLVKSINVSGHKYGLVYAGVGWVVW 290 (356)
Q Consensus 218 ~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~-~~~~Ds~~~~~hK~l~~P~g~g~l~~ 290 (356)
+.|+++|.++|+++ ++++++|++|+.++... ....... .. ...+|.++.+.+|+++.+. |+++.
T Consensus 194 ~~~l~~i~~l~~~~------~~~livDea~~~g~~g~-~g~g~~~~~~~~~~~div~~tlsK~~g~~G--G~~~~ 259 (410)
T PRK13392 194 IAPIEAICDLADRY------NALTYVDEVHAVGLYGA-RGGGIAERDGLMDRIDMIQGTLAKAFGCLG--GYIAA 259 (410)
T ss_pred cccHHHHHHHHHHc------CCEEEEECCccccCcCC-CCCchhhhccCCCCCcEEEEEChHhhhccc--chhhc
Confidence 99999999999999 99999999998443310 0000001 01 2357878789999876543 56654
No 224
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.64 E-value=1.4e-15 Score=140.28 Aligned_cols=190 Identities=18% Similarity=0.206 Sum_probs=133.3
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
+.|.+.+++..+.... -.|...+.+.++|+. +++++|.+. .+++++||.||..++.+...+
T Consensus 7 ~~~~m~~a~~~a~~gd-~~Yg~D~~~~~l~~~----i~~l~g~e~-------a~f~~sGT~An~~al~~~~~~------- 67 (290)
T PF01212_consen 7 PTPAMLEAMAAANVGD-DAYGEDPTTARLEER----IAELFGKEA-------ALFVPSGTMANQLALRAHLRP------- 67 (290)
T ss_dssp S-HHEEHHHHHTTSB--CCTTSSHHHHHHHHH----HHHHHTSSE-------EEEESSHHHHHHHHHHHHHHT-------
T ss_pred CCHHHHHHHHccccCC-cccCCChhHHHHHHH----HHHHcCCCE-------EEEeCCCChHHHHHHHHHHhc-------
Confidence 5577888885443322 246666666666655 889999985 579999999999999998854
Q ss_pred cCCCCCCCeEEecCCCcchHHHH---HHhhCCeeEEEEecCCccccCHHHHHHHHhh------CceEEEEecCCCcc-cc
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKF---ARYFEVELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLT-GE 217 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~---~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~t-G~ 217 (356)
...||+..++|...... ....|++++.|+.+++ +.+|+++|++.+.+ ++++|+++.+++.. |.
T Consensus 68 ------~~~vi~~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~-G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~ 140 (290)
T PF01212_consen 68 ------GESVICADTAHIHFDETGAIEELSGAKLIPLPSDDD-GKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGT 140 (290)
T ss_dssp ------TEEEEEETTEHHHHSSTTHHHHHTTCEEEEEBECTG-TBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB
T ss_pred ------CCceeccccceeeeeccchhhHhcCcEEEECCCccc-CCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCe
Confidence 46899999999865432 2346888888887653 89999999999976 46788888888875 55
Q ss_pred c---CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 218 F---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 218 ~---~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
+ +++++|.++||++ |+++|.|||=-+-..... .....++ ..++|++++++.|.+++|.| ++++.++
T Consensus 141 ~~s~~el~ai~~~a~~~------gl~lhmDGARl~~a~~~~-~~~~~e~-~~~~D~v~~~~tK~~g~~~G-avl~~~~ 209 (290)
T PF01212_consen 141 VYSLEELRAISELAREH------GLPLHMDGARLANAAAAL-GVSLAEI-AAGADSVSFGGTKNGGAPGG-AVLAGNK 209 (290)
T ss_dssp ---HHHHHHHHHHHHHH------T-EEEEEETTHHHHHCHH-HHHHHHH-HTTSSEEEEETTSTT-SSSE-EEEEESH
T ss_pred eCCHHHHHHHHHHHHhC------ceEEEEehhhHHHhhhcc-cccHHHH-hhhCCEEEEEEEcccccccc-eEEEech
Confidence 4 5788899999999 999999998321111000 0001122 25899999999999988776 5555543
No 225
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.64 E-value=6.2e-15 Score=141.31 Aligned_cols=179 Identities=14% Similarity=0.119 Sum_probs=126.3
Q ss_pred CcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcc
Q 018437 86 DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV 165 (356)
Q Consensus 86 ~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~ 165 (356)
.|..++...++|++ +++++|.+. .+.|++||.|+.++..+..+ .+++| +.++|.
T Consensus 66 ~yag~~s~~~lE~~----va~~~G~~~-------av~v~sGT~Al~ll~~l~l~-------------pGDeV--psn~~f 119 (450)
T TIGR02618 66 AYAGSRNFYHLERT----VRELYGFKY-------VVPTHQGRGAENLLSQIAIK-------------PGDYV--PGNMYF 119 (450)
T ss_pred hhcCCCcHHHHHHH----HHHHHCCCe-------EEEcCCHHHHHHHHHHhCCC-------------CcCEE--CCceeH
Confidence 36677888888877 788889975 88999999997764322211 13454 668886
Q ss_pred hHHHH-HHhhCCeeEEEEec---------CCccccCHHHHHHHHhhC----ceEEEEecCCCcc-ccc---CCHHHHHHH
Q 018437 166 CWEKF-ARYFEVELKEVKLE---------EGYYVMNPVKAVELVDEN----TICVAAILGSTLT-GEF---EDVKLLHDL 227 (356)
Q Consensus 166 s~~~~-~~~~G~~v~~v~~~---------~~~~~~d~~~L~~~i~~~----~~~v~~~~~~~~t-G~~---~~i~~I~~i 227 (356)
+-..+ +.+.|+.++-++.+ +.+|.+|+++|+++|+++ +.+|.+..++|.. |.+ .++++|.++
T Consensus 120 ~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~el 199 (450)
T TIGR02618 120 TTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVREL 199 (450)
T ss_pred HHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHH
Confidence 65554 67788865555444 335899999999999863 3466777777765 677 678999999
Q ss_pred HHHhhhccCCCCcEEEeccccccccccc-------CCCCcccc--c-CCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCc
Q 018437 228 LTKKNEETGWDTPIHVDAASGGFIAPFL-------YPDLEWDF--R-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (356)
Q Consensus 228 ~~~~~~~~~~~~~l~vD~a~~~~~~~~~-------~~~~~~~~--~-~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~ 297 (356)
|++| |+++|.|+|....-.-|. .+....++ . ...+|+++.|+||-+++|.| |+++++++++..
T Consensus 200 A~~~------Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~G-G~l~~~d~~l~~ 272 (450)
T TIGR02618 200 CEAH------GIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIG-GFLCMNDDEMFQ 272 (450)
T ss_pred HHHc------CCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCc-eEEEeCCHHHHH
Confidence 9999 999999999754222111 11111111 1 34799999999999999997 788788865553
No 226
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.64 E-value=1.1e-14 Score=127.67 Aligned_cols=199 Identities=16% Similarity=0.055 Sum_probs=152.4
Q ss_pred HHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEE
Q 018437 101 VNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180 (356)
Q Consensus 101 ~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~ 180 (356)
.+.+++++|+|. .-+|.|+-++-+.++.+++.+ ++-|++...+||+..-+++..|++|..
T Consensus 67 ~~dlaeFlg~D~-------~R~t~GARe~KfavMhal~~~-------------gd~vV~D~~aHYttyvAAEragl~v~e 126 (382)
T COG1103 67 LEDLAEFLGMDE-------VRVTAGAREAKFAVMHALCKE-------------GDWVVVDSLAHYTTYVAAERAGLNVAE 126 (382)
T ss_pred HHHHHHHhCCce-------eeecccchhhHHHHHHHhccC-------------CCEEEEcCcchHHHHHHHHhcCCeEEe
Confidence 334999999986 678999999999999888764 678999999999999999999999999
Q ss_pred EEecC-CccccCHHHHHHHHhh-------CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccc
Q 018437 181 VKLEE-GYYVMNPVKAVELVDE-------NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA 252 (356)
Q Consensus 181 v~~~~-~~~~~d~~~L~~~i~~-------~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~ 252 (356)
||-.. ..+.++++...+.|++ .+.+..+|++....|.+.|.+.|+++|+++ ++++++.+||..+-+
T Consensus 127 Vp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~------gvPlllN~AYt~Grm 200 (382)
T COG1103 127 VPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREY------GVPLLLNCAYTVGRM 200 (382)
T ss_pred cCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHc------CCceEeecceeeccc
Confidence 99643 2489999988877753 267788999999999999999999999999 999999999987666
Q ss_pred cccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHH
Q 018437 253 PFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (356)
Q Consensus 253 ~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l 332 (356)
| .+.+..++|+++.|+||.+-+-..||++.++. ++....+..+-.+....... .+.||-.+..++.+-+++
T Consensus 201 p-------vs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~e-E~ae~V~r~Sg~~~~~KEve-llGCT~rGapivTlmASf 271 (382)
T COG1103 201 P-------VSGKEIGADFIVGSGHKSMAASAPIGVLAMSE-EWAEIVLRRSGRAFPKKEVE-LLGCTVRGAPIVTLMASF 271 (382)
T ss_pred c-------ccccccCCCEEEecCccchhccCCeeEEeehh-HHHHHHHhhcccccccceee-eecccccCchHHHHHhcC
Confidence 3 45556799999999999988888899998864 34322222221212111111 244665565566665555
Q ss_pred HH
Q 018437 333 IR 334 (356)
Q Consensus 333 ~~ 334 (356)
-.
T Consensus 272 P~ 273 (382)
T COG1103 272 PH 273 (382)
T ss_pred HH
Confidence 43
No 227
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.64 E-value=1.8e-14 Score=137.47 Aligned_cols=189 Identities=15% Similarity=0.132 Sum_probs=135.4
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
+++.+.+++.+.+.. ...|. .++.. ++++.+++.+++++ ..+++|+|+++++..++.++ .
T Consensus 33 ~p~~~~~a~~~~~~~-~~~Y~-~~~~~----~lr~~ia~~~~~~~-----~~i~it~Ga~~~l~~~~~~~-~-------- 92 (354)
T PRK06358 33 VPESLKQAITENLDK-LVEYP-DPDYL----ELRKRIASFEQLDL-----ENVILGNGATELIFNIVKVT-K-------- 92 (354)
T ss_pred CCHHHHHHHHHHHHh-hhcCC-CccHH----HHHHHHHHHhCCCh-----hhEEECCCHHHHHHHHHHHh-C--------
Confidence 356777777766542 22222 22333 45555777778876 34899999999998887764 1
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEEecCCCcccccCC---HHH
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKL 223 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---i~~ 223 (356)
++.|+++.|+|..+...++..|++++.+++++ +++.+| +++++.+.+++++|++++|+||||.+.+ +++
T Consensus 93 ------~~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~ 165 (354)
T PRK06358 93 ------PKKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISKEEMKK 165 (354)
T ss_pred ------CCcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCHHHHHH
Confidence 24799999999999999999999999999974 347899 6666677777899999999999999965 778
Q ss_pred HHHHHHHhhhccCCCCcEEEecccccccccccCCCCc-cc-cc-CCCceEEEEcCCcCCC-CCcCeeEEEEeC
Q 018437 224 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WD-FR-LPLVKSINVSGHKYGL-VYAGVGWVVWRT 292 (356)
Q Consensus 224 I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~-~~-~~~~Ds~~~~~hK~l~-~P~g~g~l~~~~ 292 (356)
|.++|+++ ++++++|++|..+... ..... .. +. ..++ .+.-|+.|.++ ....+|+++..+
T Consensus 166 l~~~a~~~------~~~ii~De~Y~~~~~~--~~~~~~~~~~~~~~~v-i~~~S~SK~~gl~G~RiG~lv~~~ 229 (354)
T PRK06358 166 ILDKCEKR------NIYLIIDEAFMDFLEE--NETISMINYLENFKNL-IIIRAFTKFFAIPGLRLGYGLTSN 229 (354)
T ss_pred HHHHHHhc------CCEEEEeCcccccCCC--ccchhHHHhccCCCCE-EEEEechhhccCcchhheeeecCC
Confidence 88889999 9999999999865431 11000 11 11 1122 33456889876 778999998743
No 228
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.63 E-value=1.1e-14 Score=137.99 Aligned_cols=186 Identities=16% Similarity=0.143 Sum_probs=135.7
Q ss_pred CChHHHHHHHHHHhcc-cCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (356)
++++.+.+++.+++.. ....|. .++...++ +++++.+|+++ ..+++|+|+++++...+.++ +
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~Y~-~~g~~~lr----~~ia~~~~~~~-----~~I~~t~G~~~~l~~~~~~~--~----- 93 (337)
T PRK03967 31 DLPEELKEEIFEELKRVPFNRYP-HITSDPLR----EAIAEFYGLDA-----ENIAVGNGSDELISYLVKLF--E----- 93 (337)
T ss_pred CCCHHHHHHHHHHhhcCccccCC-CCCHHHHH----HHHHHHhCcCc-----ceEEEcCCHHHHHHHHHHHh--C-----
Confidence 3446777777776643 233333 34554554 45777778776 34889999999987665443 1
Q ss_pred HhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHH
Q 018437 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLH 225 (356)
Q Consensus 146 ~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~ 225 (356)
+++|+++.|+|..+...++..|++++.|+++++ +.+|++.|++++ ++++++++++|+||||.+.+.++|.
T Consensus 94 --------gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~~l~ 163 (337)
T PRK03967 94 --------GKHIVITPPTFGMYSFYAKLNGIPVIDVPLKED-FTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEEEIL 163 (337)
T ss_pred --------CCeEEEeCCChHHHHHHHHHcCCeEEEeecCCC-CCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 478999999999898888999999999999864 899999998875 5678888999999999999999999
Q ss_pred HHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCC-CCcCeeEEEEe
Q 018437 226 DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (356)
Q Consensus 226 ~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~-~P~g~g~l~~~ 291 (356)
++++ + ++++++|++|..+.. ........ .+. -.+..|+.|.++ ....+|+++..
T Consensus 164 ~i~~-~------~~~ii~De~y~~~~~----~~~~~~~~~~~~-vi~l~S~SK~~~l~GlRiG~iv~~ 219 (337)
T PRK03967 164 KVLE-T------GKPVVLDEAYAEFSG----KSLIGLIDEYPN-LILLRTFSKAFGLAGIRAGYAIAN 219 (337)
T ss_pred HHHh-c------CCEEEEECchhhhcc----cchHHHHhhCCC-EEEEecchHhhcchhhhheeeecC
Confidence 9994 7 899999999986431 11000011 122 234467899876 55789999864
No 229
>PRK10534 L-threonine aldolase; Provisional
Probab=99.63 E-value=2.9e-15 Score=141.57 Aligned_cols=191 Identities=13% Similarity=0.036 Sum_probs=125.8
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
.++|.+.+++.+... +...|...+...+++++ +++++|.+. .++++||++++..++.+...+
T Consensus 11 ~p~~~~~~a~~~~~~-~~~~Y~~~~~~~~L~~~----la~~~g~~~-------~~v~~~g~~a~~~~l~~~~~~------ 72 (333)
T PRK10534 11 RPSRAMLEAMMAAPV-GDDVYGDDPTVNALQDY----AAELSGKEA-------ALFLPTGTQANLVALLSHCER------ 72 (333)
T ss_pred CCCHHHHHHHHhccC-CCcccCCCHHHHHHHHH----HHHHhCCCe-------EEEeCchHHHHHHHHHHhcCC------
Confidence 366788888876443 33344455566666655 788889875 578899999998888876432
Q ss_pred hcCCCCCCCeEEecCCCcch-HHHH-HHhhC-CeeEEEEecCCccccCHHHHHHHHhh------CceEEEEecCCCcccc
Q 018437 147 EQGKPYDKPNIVTGANVQVC-WEKF-ARYFE-VELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLTGE 217 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~h~s-~~~~-~~~~G-~~v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~ 217 (356)
+++|+++.+.|.. +... +...| +.++.+++++ ++.+|+++|++++++ ++++|++++|+ +|+
T Consensus 73 -------gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~ 142 (333)
T PRK10534 73 -------GEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAA-DGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGK 142 (333)
T ss_pred -------CCeeEEechhhhhHhcCCchHHhcCceEEeecCCC-CCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCe
Confidence 4688888888854 4321 34444 6777787775 489999999999976 57888888655 599
Q ss_pred cCCHHH---HHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCC
Q 018437 218 FEDVKL---LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (356)
Q Consensus 218 ~~~i~~---I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~ 294 (356)
+.|.++ |.++|+++ ++++++|+||..+........ ...+ ....|.++++++|.++.+ .|..++.+++
T Consensus 143 v~~~~~l~~i~~~~~~~------~~~lvvDEA~~~~~~~~~~~~-~~~~-~~~~~~~~~s~SK~~~~~--~G~~~~~~~~ 212 (333)
T PRK10534 143 VLPREYLKQAWEFTRER------NLALHVDGARIFNAVVAYGCE-LKEI-TQYCDSFTICLSKGLGTP--VGSLLVGNRD 212 (333)
T ss_pred ecCHHHHHHHHHHHHHc------CCeEEeeHHHHHHHHHHcCCC-HHHH-HhcCCEEEEEeEcCCCCc--ccceEEcCHH
Confidence 876655 56788888 999999999763211000111 1111 123466677899976655 5643344443
Q ss_pred C
Q 018437 295 D 295 (356)
Q Consensus 295 ~ 295 (356)
.
T Consensus 213 ~ 213 (333)
T PRK10534 213 Y 213 (333)
T ss_pred H
Confidence 3
No 230
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.63 E-value=3.2e-15 Score=143.09 Aligned_cols=156 Identities=15% Similarity=0.019 Sum_probs=115.9
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~ 169 (356)
.|....+|+. ++++.+ + ..+++++|++|+..++.++.++ +++|+++.+.|+.+..
T Consensus 50 ~p~~~~Le~~----lA~l~~-~-------~~v~~~sG~~Ai~~~l~all~~-------------Gd~Vl~~~~~y~~~~~ 104 (366)
T PRK07582 50 NPTWRALEAA----LGELEG-A-------EALVFPSGMAAITAVLRALLRP-------------GDTVVVPADGYYQVRA 104 (366)
T ss_pred CccHHHHHHH----HHHHcC-C-------CEEEECCHHHHHHHHHHHhcCC-------------CCEEEEeCCCcHhHHH
Confidence 4466666655 666662 2 2577788889998888776432 5799999999877765
Q ss_pred HH----HhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEec
Q 018437 170 FA----RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (356)
Q Consensus 170 ~~----~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~ 245 (356)
.+ ...|++++.++.+++ +. .+.+++++|+++.|+||+|.+.|+++|.++|+++ |++++||+
T Consensus 105 ~~~~~l~~~G~~v~~v~~~~~-~~--------~~~~~t~lV~le~p~NPtg~v~di~~I~~~a~~~------g~~lvVD~ 169 (366)
T PRK07582 105 LAREYLAPLGVTVREAPTAGM-AE--------AALAGADLVLAETPSNPGLDVCDLAALAAAAHAA------GALLVVDN 169 (366)
T ss_pred HHHHHHhcCeEEEEEECCCCh-HH--------HhccCceEEEEECCCCCCCCccCHHHHHHHHHHc------CCEEEEEC
Confidence 44 346899999987642 21 2336789999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeCC
Q 018437 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTK 293 (356)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~~ 293 (356)
+|..+.. ..+.+ .++|.++.|+|||+.+|.| .|+++.+++
T Consensus 170 t~~~~~~-----~~p~~---~g~Divv~S~sK~l~G~~g~~~G~v~~~~~ 211 (366)
T PRK07582 170 TTATPLG-----QRPLE---LGADLVVASDTKALTGHSDLLLGYVAGRDP 211 (366)
T ss_pred CCCCccc-----cCchh---cCCcEEEecccccccCCCCeeEEEEEcCcH
Confidence 9853211 11222 3689999999999988887 588876544
No 231
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.63 E-value=5.2e-15 Score=142.00 Aligned_cols=154 Identities=15% Similarity=0.044 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH----HHH
Q 018437 97 QNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK----FAR 172 (356)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~----~~~ 172 (356)
.+.+.+.++.+.|.+. .+++++|++|+..++.++.++ +++||++.+.|.++.. .++
T Consensus 66 ~~~Le~~la~le~~~~-------~v~~sSG~aAi~~~l~all~~-------------GD~Vlv~~~~Y~~~~~l~~~~l~ 125 (395)
T PRK05967 66 TDALCKAIDALEGSAG-------TILVPSGLAAVTVPFLGFLSP-------------GDHALIVDSVYYPTRHFCDTMLK 125 (395)
T ss_pred HHHHHHHHHHHhCCCC-------EEEECcHHHHHHHHHHHhcCC-------------CCEEEEccCCcHHHHHHHHHHHH
Confidence 3345555788776543 567777899999998887543 6799999999988764 456
Q ss_pred hhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccc
Q 018437 173 YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA 252 (356)
Q Consensus 173 ~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~ 252 (356)
.+|+++++++.+ +.+.++++++++|++|++++|+||++.+.|+++|+++|+++ |++++||++|+.++.
T Consensus 126 ~~Gi~v~~vd~~------~~e~l~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~------g~~vvVD~t~a~p~~ 193 (395)
T PRK05967 126 RLGVEVEYYDPE------IGAGIAKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRH------GAIVMMDNTWATPLY 193 (395)
T ss_pred hcCeEEEEeCCC------CHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHh------CCEEEEECCccCcee
Confidence 779998888643 34789999999999999999999999999999999999999 999999999986433
Q ss_pred cccCCCCcccccCCCceEEEEcCCcCCCCCc--CeeEEEE
Q 018437 253 PFLYPDLEWDFRLPLVKSINVSGHKYGLVYA--GVGWVVW 290 (356)
Q Consensus 253 ~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~--g~g~l~~ 290 (356)
..+ . ..|+|.+..|..|++.+.. -.|+++.
T Consensus 194 --~~p---l---~~GaDivv~S~tKy~~Gh~d~~~G~v~~ 225 (395)
T PRK05967 194 --FRP---L---DFGVDISIHAATKYPSGHSDILLGTVSA 225 (395)
T ss_pred --cCh---h---HcCCCEEEEecccccCCCCCeeEEEEEc
Confidence 221 2 2489999999999964322 1565543
No 232
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.63 E-value=7.6e-15 Score=142.29 Aligned_cols=151 Identities=19% Similarity=0.098 Sum_probs=123.2
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~ 169 (356)
.|....+|+. ++++.|... .+.+++|+.|+.+++.++..+ +++||++.+.|.+...
T Consensus 60 nPtv~~lE~~----la~leg~~~-------av~~~SG~aAi~~al~all~~-------------GD~VI~~~~~Y~~T~~ 115 (432)
T PRK06702 60 NPTLAAFEQK----LAELEGGVG-------AVATASGQAAIMLAVLNICSS-------------GDHLLCSSTVYGGTFN 115 (432)
T ss_pred CcHHHHHHHH----HHHHhCCCc-------EEEECCHHHHHHHHHHHhcCC-------------CCEEEECCCchHHHHH
Confidence 4566667666 888888864 688999999999999877432 5799999998875444
Q ss_pred H----HHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEec
Q 018437 170 F----ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (356)
Q Consensus 170 ~----~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~ 245 (356)
. +..+|+++++++ ..+|+++++++|+++|++|++.+++||++.+.|+++|+++|+++ |+++++|+
T Consensus 116 ~~~~~l~~~Gi~v~~vd-----~~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~------gi~livD~ 184 (432)
T PRK06702 116 LFGVSLRKLGIDVTFFN-----PNLTADEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKEL------EVPFIVDN 184 (432)
T ss_pred HHHHHHHHCCCEEEEEC-----CCCCHHHHHHhCCcCCeEEEEEcCCCccccccCHHHHHHHHHHc------CCEEEEEC
Confidence 4 677899988884 35789999999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCcccccCCCceEEEEcCCcCCCCCc
Q 018437 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA 283 (356)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~ 283 (356)
+++.... ..+ . ..|+|.++.|..||+.+..
T Consensus 185 T~~tP~~--~~p---l---~~GADIvv~S~TKy~~Ghs 214 (432)
T PRK06702 185 TLATPYL--CQA---F---EHGANIIVHSTTKYIDGHA 214 (432)
T ss_pred CCCchhh--CCh---h---hcCCCEEEEccccccCCCc
Confidence 9864322 111 1 3589999999999987764
No 233
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.62 E-value=3.3e-14 Score=137.96 Aligned_cols=192 Identities=12% Similarity=-0.032 Sum_probs=130.6
Q ss_pred CChHHHHHHHHHHhcccCCCcccCc---chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYP---VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (356)
..+|.+.+++.+.++........+. +......++.+.+++++|.+. .+++++|++||..++.++...
T Consensus 59 ~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~~~-------~l~~~sG~~an~~ai~~l~~~--- 128 (402)
T TIGR01821 59 GQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGKES-------ALVFTSGYVANDATLATLAKI--- 128 (402)
T ss_pred CCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCCCe-------EEEECchHHHHHHHHHHhhCC---
Confidence 4467888888888765332221111 223444567777999998653 566777799999988876531
Q ss_pred HHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHh----hCceEEEEecCCCcccccC
Q 018437 144 KRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTGEFE 219 (356)
Q Consensus 144 ~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~----~~~~~v~~~~~~~~tG~~~ 219 (356)
..+..|+.....|.+....+...|+++..++. .|+++|++.++ +++++|++++++|++|.+.
T Consensus 129 --------~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~------~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~ 194 (402)
T TIGR01821 129 --------IPGCVIFSDELNHASMIEGIRHSGAEKFIFRH------NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIA 194 (402)
T ss_pred --------CCCCEEEEcchHhHHHHHHHHHcCCeEEEECC------CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCcc
Confidence 01346666667899988888888887655432 26677777775 2578999999999999999
Q ss_pred CHHHHHHHHHHhhhccCCCCcEEEecccccccc-cccCCCC-cccccCCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 220 DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-PFLYPDL-EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 220 ~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~-~~~~~~~-~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
|+++|.++|+++ ++++++|+||+.++. +....-. ...+ ...+|.+..+..|.++.+ | |+++.+
T Consensus 195 ~l~~i~~l~~~~------~~~livDea~~~G~~g~~g~g~~~~~~~-~~~~div~~t~sKa~g~~-G-G~i~~~ 259 (402)
T TIGR01821 195 PIEEICDLADKY------GALTYLDEVHAVGLYGPRGGGIAERDGL-MHRIDIIEGTLAKAFGVV-G-GYIAAS 259 (402)
T ss_pred CHHHHHHHHHHc------CCEEEEeCcccccccCCCCCccchhccC-CCCCeEEEEechhhhccC-C-ceeecC
Confidence 999999999999 999999999984432 1111100 0111 134688877899988543 3 565543
No 234
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.62 E-value=2.7e-14 Score=136.36 Aligned_cols=202 Identities=14% Similarity=0.075 Sum_probs=140.8
Q ss_pred cccccccCC-CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 58 LNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 58 ~~l~~~~~~-~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
++|+.+.+. .+++.+.+++.+.+.. ...|. .++... +++.+++.+++++ ..+++|+|+++++.+++.+
T Consensus 33 i~l~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~-~~~~~~----lr~~ia~~~~~~~-----~~I~it~G~~~al~~~~~~ 101 (357)
T PRK14809 33 VKLSSNENPHGPSPAAVEAIREAAER-VHSYP-KASHAD----LTAALADRWDVSP-----EQVWLANGGDGALDYLARA 101 (357)
T ss_pred eEecCCCCCCCCCHHHHHHHHHHHhh-hhcCC-CCCHHH----HHHHHHHHhCCCc-----ceEEECCCHHHHHHHHHHH
Confidence 344444333 3456777777766542 22232 234444 4455677778876 3489999999999988887
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEEecCCCcc
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLT 215 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (356)
+.++ ++.|++++|+|..+...++..|++++.+|++. +++.+|++++++.. +++++|++++|+|||
T Consensus 102 ~~~~-------------gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPT 167 (357)
T PRK14809 102 MLDP-------------GDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPT 167 (357)
T ss_pred hcCC-------------CCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCC
Confidence 7543 57899999999888888888999999999864 34788998888776 357899999999999
Q ss_pred cccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCC-CCcCeeEEEEeC
Q 018437 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGL-VYAGVGWVVWRT 292 (356)
Q Consensus 216 G~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~-~P~g~g~l~~~~ 292 (356)
|.+-+.+++.++++...+ ++++++|++|+.+... +.....+. ..++ .+..++.|.++ ....+|+++..+
T Consensus 168 G~~~s~~~~~~l~~~~~~----~~~iI~De~y~~~~~~---~~~~~~~~~~~~v-i~~~SfSK~~~~~GlRiG~~~~~~ 238 (357)
T PRK14809 168 GSEIPLDEVEALAERTDE----ETLVVVDEAYGEFAER---PSAVALVEERDDV-AVLRTFSKAYGLAGLRLGYAVVPE 238 (357)
T ss_pred CcCCCHHHHHHHHHhCcc----CcEEEEechhhhccCC---chhHHHHhhCCCE-EEEecchhHhcCcchhheeeecCH
Confidence 999999888888886522 6799999999875421 11000111 1121 33446889875 567899998743
No 235
>PRK07908 hypothetical protein; Provisional
Probab=99.62 E-value=3.3e-14 Score=135.33 Aligned_cols=181 Identities=13% Similarity=0.017 Sum_probs=129.7
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
+++.+.+++.+.+.. ...|....+... +++.+++.+|+++ ..+++|+|+++++..++. + .
T Consensus 36 ~~~~~~~~~~~~~~~-~~~Y~~~~g~~~----lr~aia~~~~~~~-----~~I~it~Ga~~al~~~~~-l-~-------- 95 (349)
T PRK07908 36 PPEWLRERLAARLGD-LAAYPSTEDERR----ARAAVAARHGRTP-----DEVLLLAGAAEGFALLAR-L-R-------- 95 (349)
T ss_pred CCHHHHHHHHHHhhH-hhcCCCccchHH----HHHHHHHHhCcCh-----hhEEECCCHHHHHHHHHh-c-C--------
Confidence 456788888776643 222333334444 4455777788876 348999999999987766 2 1
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHH
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDL 227 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i 227 (356)
.+.+++..|++..+...++..|++++.+|++++ +.+|++.+ .++++++++++|+||||.+.+.++|.++
T Consensus 96 ------~~~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~-~~~d~~~l----~~~~~~i~l~np~NPTG~~~~~~~l~~l 164 (349)
T PRK07908 96 ------PRRAAVVHPSFTEPEAALRAAGIPVHRVVLDPP-FRLDPAAV----PDDADLVVIGNPTNPTSVLHPAEQLLAL 164 (349)
T ss_pred ------CCeEEEeCCCChHHHHHHHHcCCEEEeeccCcc-cCcChhHh----ccCCCEEEEcCCCCCCCCCcCHHHHHHH
Confidence 135667789998888999999999999999875 88999865 4567899999999999999999999999
Q ss_pred HHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEE-cCCcCCC-CCcCeeEEEEe
Q 018437 228 LTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINV-SGHKYGL-VYAGVGWVVWR 291 (356)
Q Consensus 228 ~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~-~~hK~l~-~P~g~g~l~~~ 291 (356)
|+ + +.++++|++|+.++. .. ...+. ...-+.+.+ |++|.++ ....+|+++..
T Consensus 165 ~~-~------~~~iIvDe~y~~~~~----~~-~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~ 219 (349)
T PRK07908 165 RR-P------GRILVVDEAFADAVP----GE-PESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGA 219 (349)
T ss_pred Hh-c------CCEEEEECcchhhcc----CC-ccccccccCCCEEEEeecccccCCccceeeeeecC
Confidence 96 4 678999999986432 11 11111 111245555 7899764 55678999864
No 236
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.62 E-value=4.6e-14 Score=134.82 Aligned_cols=199 Identities=20% Similarity=0.167 Sum_probs=138.9
Q ss_pred HHHHHHHHH-Hhc-ccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 70 PECDKLVMA-SIN-KNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 70 ~~v~~~i~~-~~~-~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
+.+.+++.+ ... .....|....+...+++++.+++.+-.|++.+. ...+++++|+.+++..++..++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~--~~~i~~~~G~~~~~~~~~~~~~~-------- 90 (363)
T PF00155_consen 21 PAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDP--EANILVTSGAQAALFLLLRLLKI-------- 90 (363)
T ss_dssp HHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTG--GEGEEEESHHHHHHHHHHHHHHS--------
T ss_pred HHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCccccc--ceEEEEecccccchhhhhhcccc--------
Confidence 445555443 222 233456666688889988888888666666522 11466676666666555554421
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec-CCccccCHHHHHHHHhh------CceEEEEecCCCcccccCC
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFED 220 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~ 220 (356)
..++.|+++.|.|..+...++..|++++.+|++ ++++.+|+++|++.+++ ++++|+++.|+||||.+-+
T Consensus 91 ----~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~ 166 (363)
T PF00155_consen 91 ----NPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLS 166 (363)
T ss_dssp ----STTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--
T ss_pred ----cccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeecccccccccccc
Confidence 015789999999999999999999999999985 34589999999999987 5789999999999999855
Q ss_pred H---HHHHHHHHHhhhccCCCCcEEEecccccccccccCCCC---cccccCCCc-eEEEEcCCcCCCCC-cCeeEEEEe
Q 018437 221 V---KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL---EWDFRLPLV-KSINVSGHKYGLVY-AGVGWVVWR 291 (356)
Q Consensus 221 i---~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~---~~~~~~~~~-Ds~~~~~hK~l~~P-~g~g~l~~~ 291 (356)
. ++|+++|+++ ++++++|.+|+.+... .... ...+ .... ..+..|..|.++.| ..+|++++.
T Consensus 167 ~~~l~~l~~~~~~~------~~~ii~De~y~~~~~~--~~~~~~~~~~~-~~~~~vi~~~S~SK~~g~~GlRvG~i~~~ 236 (363)
T PF00155_consen 167 LEELRELAELAREY------NIIIIVDEAYSDLIFG--DPDFGPIRSLL-DEDDNVIVVGSLSKSFGLPGLRVGYIVAP 236 (363)
T ss_dssp HHHHHHHHHHHHHT------TSEEEEEETTTTGBSS--SSHTHHHHGHH-TTTSTEEEEEESTTTTTSGGGTEEEEEEE
T ss_pred cccccchhhhhccc------ccceeeeeceeccccC--CCccCcccccc-cccccceeeeeccccccccccccccccch
Confidence 5 5555669999 9999999999986552 1100 1111 1222 46667799976544 578999884
No 237
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.62 E-value=1.7e-14 Score=141.47 Aligned_cols=182 Identities=13% Similarity=0.064 Sum_probs=135.4
Q ss_pred cCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHH
Q 018437 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE 168 (356)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~ 168 (356)
...|...+++++.+++.+.+|.... .+...+++|+|+++++.+.++++.++ ++.|+++.|.|..+.
T Consensus 93 ~~~G~~~LR~aiA~~l~~~~~~~~~-v~p~~Ivit~G~t~al~~l~~~l~~p-------------GD~Vlv~~P~Y~~f~ 158 (447)
T PLN02607 93 DYHGLKSFRQAMASFMEQIRGGKAR-FDPDRIVLTAGATAANELLTFILADP-------------GDALLVPTPYYPGFD 158 (447)
T ss_pred CCcchHHHHHHHHHHHHHhcCCCCC-cCHHHeEEcCChHHHHHHHHHHhCCC-------------CCEEEEcCCCCcchH
Confidence 3457889999999999988773210 01235889999999998888877653 578999999999998
Q ss_pred HHHH-hhCCeeEEEEecC-CccccCHHHHHHHHhh------CceEEEEecCCCcccccCC---HHHHHHHHHHhhhccCC
Q 018437 169 KFAR-YFEVELKEVKLEE-GYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGW 237 (356)
Q Consensus 169 ~~~~-~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~ 237 (356)
..+. ..|++++.|++++ +++.+|++++++++.+ ++++|++++|+||||.+-+ +++|.++|+++
T Consensus 159 ~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~------ 232 (447)
T PLN02607 159 RDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRK------ 232 (447)
T ss_pred HHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHC------
Confidence 8776 4789999999874 3478999999999874 6789999999999999855 77888999999
Q ss_pred CCcEEEecccccccccccCCCC-c-ccc----c----CCCceEEEEcCCcCCC-CCcCeeEEEEeCC
Q 018437 238 DTPIHVDAASGGFIAPFLYPDL-E-WDF----R----LPLVKSINVSGHKYGL-VYAGVGWVVWRTK 293 (356)
Q Consensus 238 ~~~l~vD~a~~~~~~~~~~~~~-~-~~~----~----~~~~Ds~~~~~hK~l~-~P~g~g~l~~~~~ 293 (356)
++++++|++|...+.. .+.. . ..+ . ..++ .+..+..|-++ ....+|+++..++
T Consensus 233 ~i~lI~DEiYa~~~f~--~~~f~S~~s~~~~~~~~~~~~~v-~vi~s~SK~fg~~GlRvG~ivs~n~ 296 (447)
T PLN02607 233 NIHLVSDEIYSGSVFS--ASEFVSVAEIVEARGYKGVAERV-HIVYSLSKDLGLPGFRVGTIYSYND 296 (447)
T ss_pred CCEEEEeccccccccC--CCCcccHHHHHhhcCCCCCcCcE-EEEEcchhcCCCCcceEEEEEEcCH
Confidence 9999999999875431 1100 0 000 0 0122 34567889765 6678999987543
No 238
>PLN02672 methionine S-methyltransferase
Probab=99.61 E-value=1.4e-14 Score=151.88 Aligned_cols=213 Identities=9% Similarity=0.086 Sum_probs=153.4
Q ss_pred CCCCcccccccCCC-ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHH
Q 018437 54 GNPRLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (356)
Q Consensus 54 ~~~~~~l~~~~~~~-~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~ 132 (356)
+++.++|..+.+.. +++.+.+++.+.+..... +.+...+.+++++++++.+|++.+. ..++++|+|+++++..
T Consensus 696 g~~vI~LsinE~d~ppPp~V~eAi~eal~~~~~----s~g~pdlr~aLa~~la~~~Gv~~d~--~e~IIvt~Gs~elL~l 769 (1082)
T PLN02672 696 ESSLIHMDVDESFLPVPSAVKASIFESFVRQNI----SESETDPRPSILQFIKSNYGFPTDS--CTEFVYGDTSLALFNK 769 (1082)
T ss_pred CCCEEEEeCCCCCCCCCHHHHHHHHHHHhhcCC----CCCChHHHHHHHHHHHHHhCcCCCC--CCEEEEeCCHHHHHHH
Confidence 44555666655554 456888888776643211 2233456789999999999998631 1247888888888888
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhh-CceEEEEec
Q 018437 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDE-NTICVAAIL 210 (356)
Q Consensus 133 al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~-~~~~v~~~~ 210 (356)
++.++.++ ++.|+++.|+|+.|...++..|++++.||+++ +++.+|++.|++++++ ++++|++++
T Consensus 770 ll~aLl~p-------------GD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~n 836 (1082)
T PLN02672 770 LVLCCVQE-------------GGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISG 836 (1082)
T ss_pred HHHHHcCC-------------CCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEEC
Confidence 88877653 57999999999999999999999999999974 4589999999999976 346889999
Q ss_pred CC-Cccccc---CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCC-ccccc-----CCC----ceEEEE-cC
Q 018437 211 GS-TLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWDFR-----LPL----VKSINV-SG 275 (356)
Q Consensus 211 ~~-~~tG~~---~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~-----~~~----~Ds~~~-~~ 275 (356)
|| ||||.+ +.+++|.++|++| ++++++|++|+.+... .... ..++. ... ...+.+ +.
T Consensus 837 PnhNPTG~v~S~eeLe~Llela~k~------di~VIsDEaYsdL~Fd--~~~~s~~sl~s~l~~~~~~sks~nVIvL~Sf 908 (1082)
T PLN02672 837 PTINPTGLLYSNSEIEEILSVCAKY------GARVIIDTSFSGLEYD--TSGWGGWDLKSILSRLKSSNPSFAVALLGGL 908 (1082)
T ss_pred cCCCCcCccCCHHHHHHHHHHHHHc------CCEEEEeCCCCccccC--CCCCcccchhhHHHHhccccCCceEEEEeCc
Confidence 98 999998 4577888899999 9999999999865441 1100 01110 000 012333 55
Q ss_pred C-cCCCCCcCeeEEEEeCC
Q 018437 276 H-KYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 276 h-K~l~~P~g~g~l~~~~~ 293 (356)
. |++.+...+|+++..++
T Consensus 909 SKkf~lpGLRIGylIap~~ 927 (1082)
T PLN02672 909 STELLSGGHEFGFLALNDS 927 (1082)
T ss_pred HHhhccHHHHheeEEeCCH
Confidence 6 57777789999987543
No 239
>PRK08354 putative aminotransferase; Provisional
Probab=99.60 E-value=3.9e-14 Score=132.71 Aligned_cols=171 Identities=20% Similarity=0.182 Sum_probs=122.8
Q ss_pred hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhc
Q 018437 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (356)
++.+.+++.+++.... . +|... .+++++++.+|.+ +++|+|+++++...+..+. +
T Consensus 22 p~~~~~a~~~~~~~~~-~---yp~~~----~l~~~ia~~~~~~--------I~vt~G~~~al~~~~~~~~-~-------- 76 (311)
T PRK08354 22 PEWLDEMFERAKEISG-R---YTYYE----WLEEEFSKLFGEP--------IVITAGITEALYLIGILAL-R-------- 76 (311)
T ss_pred CHHHHHHHHHHHHHhh-c---CCChH----HHHHHHHHHHCCC--------EEECCCHHHHHHHHHHhhC-C--------
Confidence 4677788776654321 2 22223 3556788888742 7899999999877664332 1
Q ss_pred CCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCC---HHHHH
Q 018437 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLH 225 (356)
Q Consensus 149 g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---i~~I~ 225 (356)
+++|+++.|+|+.+...++..|++++.+ .+|++.|+++++ +++++++++|+||||.+.+ +++|.
T Consensus 77 -----gd~vlv~~P~y~~~~~~~~~~g~~~~~~-------~~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~~~l~~l~ 143 (311)
T PRK08354 77 -----DRKVIIPRHTYGEYERVARFFAARIIKG-------PNDPEKLEELVE-RNSVVFFCNPNNPDGKFYNFKELKPLL 143 (311)
T ss_pred -----CCeEEEeCCCcHHHHHHHHHcCCEEeec-------CCCHHHHHHhhc-CCCEEEEecCCCCCCCccCHHHHHHHH
Confidence 5789999999999999999999998654 357888988876 4678999999999999865 56677
Q ss_pred HHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCC-CCcCeeEEEE
Q 018437 226 DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVW 290 (356)
Q Consensus 226 ~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~-~P~g~g~l~~ 290 (356)
++|+++ ++|+++|++|+.+... +. ... .++ -.+.-|+.|.++ ....+|+++.
T Consensus 144 ~~a~~~------~~~li~De~y~~f~~~---~~-~~~--~~~-vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 144 DAVEDR------NALLILDEAFIDFVKK---PE-SPE--GEN-IIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred HHhhhc------CcEEEEeCcchhcccc---cc-ccC--CCc-EEEEeccHhhcCCccceeeeeee
Confidence 778888 9999999999876542 11 111 111 234456789876 5578898876
No 240
>PLN02397 aspartate transaminase
Probab=99.60 E-value=2.7e-14 Score=139.33 Aligned_cols=184 Identities=13% Similarity=-0.000 Sum_probs=124.1
Q ss_pred CcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHH--HHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCC
Q 018437 86 DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEA--IMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANV 163 (356)
Q Consensus 86 ~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a--~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~ 163 (356)
.|....|..++++++.+++.+..+.+.++ .......+.+|+.+ +..++.+...+ +++|++++|+
T Consensus 86 ~Y~~~~G~~~LR~aia~~~~~~~~~~~~~-~~i~~~~i~~g~Ga~~l~~~~~~~~~p-------------Gd~Vlv~~P~ 151 (423)
T PLN02397 86 EYLPIEGLAEFNKLSAKLAYGADSPAIKE-NRVATVQCLSGTGSLRLGAEFLARFYP-------------GSTIYIPNPT 151 (423)
T ss_pred CCCCcCCCHHHHHHHHHHHcCCCCchhhc-CeeEeeecccchHHHHHHHHHHHHhCC-------------CCEEEEeCCC
Confidence 57777799999999888875543222111 01111213344333 33444433221 5799999999
Q ss_pred cchHHHHHHhhCCeeEEEEe-cCCccccCHHHHHHHHh---hCceEEEEecCCCcccccC---CHHHHHHHHHHhhhccC
Q 018437 164 QVCWEKFARYFEVELKEVKL-EEGYYVMNPVKAVELVD---ENTICVAAILGSTLTGEFE---DVKLLHDLLTKKNEETG 236 (356)
Q Consensus 164 h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~~L~~~i~---~~~~~v~~~~~~~~tG~~~---~i~~I~~i~~~~~~~~~ 236 (356)
|+.+...++..|++++.+|+ +++++.+|++.+++.+. ++++++++++|+||||.+- .+++|.++|+++
T Consensus 152 y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~----- 226 (423)
T PLN02397 152 WGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSK----- 226 (423)
T ss_pred chhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhC-----
Confidence 99999999999999999998 43348999999988875 4678888999999999984 567788999999
Q ss_pred CCCcEEEeccccccccccc-CCCCc-ccccCCCceEE-EEcCCcCCC-CCcCeeEEE
Q 018437 237 WDTPIHVDAASGGFIAPFL-YPDLE-WDFRLPLVKSI-NVSGHKYGL-VYAGVGWVV 289 (356)
Q Consensus 237 ~~~~l~vD~a~~~~~~~~~-~~~~~-~~~~~~~~Ds~-~~~~hK~l~-~P~g~g~l~ 289 (356)
++++++|++|..+...-. .+... ..+...+-..+ .-|+.|.+. ..+.+|+++
T Consensus 227 -~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v 282 (423)
T PLN02397 227 -NHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALS 282 (423)
T ss_pred -CcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEE
Confidence 999999999988653100 00001 11111121244 446899876 578899986
No 241
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.60 E-value=1.2e-13 Score=142.26 Aligned_cols=296 Identities=12% Similarity=-0.027 Sum_probs=189.3
Q ss_pred ccccccc-cchhhhhcCC-CCCCCCCCCCHHHHHHHHHHHhhhcCCCCcccccccC-CCChHHHHHHHH---HHhcc-cC
Q 018437 12 EILSSTF-ASRYVRAAIP-RFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVT-TWMEPECDKLVM---ASINK-NY 84 (356)
Q Consensus 12 ~~~~~~~-~~~~~~~~~~-~~~lp~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~v~~~i~---~~~~~-~~ 84 (356)
++|+++| ...|..-.+. .+.+|+ ++++.+++++++++..++...+..++.+.. +..|+.+.+-+. .++.. .+
T Consensus 35 ~s~d~l~~~~iP~~ir~~~~l~lp~-~~sE~e~~~~~~~~a~kN~~~~~fiG~G~y~~~~P~vi~~~i~~~~~~yTaYTP 113 (954)
T PRK12566 35 ASRAELIEQTVPPAIRLNRPLDLPA-ALDEQAALARLRGYAEQNQVWTSLIGMGYHGTVTPTVILRNVLENPGWYTAYTP 113 (954)
T ss_pred cCHHHHhhccCCHHHhcCCCCCCCC-CCCHHHHHHHHHHHHhcCCCccccccccccCCcCcHHHHHHHHhCchhhhcCCC
Confidence 5688888 7777766554 356766 689999999999987766543322333333 334455534443 23433 46
Q ss_pred CCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCc
Q 018437 85 VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ 164 (356)
Q Consensus 85 ~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h 164 (356)
++++.+++..+...+.+.++++|+|++..+ ..+--|+|.+-- |+..+++..+ .++.+|++++..|
T Consensus 114 YQpEisQG~Lqal~e~Qtmi~~LtGm~vaN-----ASl~D~atA~aE-A~~ma~~~~~---------~k~~~~~v~~~~h 178 (954)
T PRK12566 114 YQPEIAQGRLEALLNFQQMTIDLTGLDLAN-----ASLLDEATAAAE-AMALAKRVAK---------SKSNRFFVDEHCH 178 (954)
T ss_pred CCchhhhHHHHHHHHHHHHHHHHhCchhhh-----hhhccchhHHHH-HHHHHHHHhh---------cCCCEEEECCCCC
Confidence 677778999999999999999999999622 233345553322 2222222111 0135799999999
Q ss_pred chHHHHHH----hhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCc
Q 018437 165 VCWEKFAR----YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTP 240 (356)
Q Consensus 165 ~s~~~~~~----~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~ 240 (356)
+.+...++ .+|++++. +++++.+++++.+|++.+||+. |.+.|+++|.+++|+. |.+
T Consensus 179 P~~~~v~~t~~~~~g~~i~~------------~~~~~~~~~~~~~v~vq~P~~~-G~i~d~~~i~~~~h~~------gal 239 (954)
T PRK12566 179 PQTLSVLRTRAEGFGFELVV------------DAVDNLAAHAVFGALLQYPDTH-GEIRDLRPLIDQLHGQ------QAL 239 (954)
T ss_pred HHHHHHHHHhhhcCCcEEEE------------cchhhcCCCCEEEEEEECCCCc-eEEccHHHHHHHHHHc------CCE
Confidence 98766554 45666653 2244455667889999999876 9999999999999999 887
Q ss_pred EEEecccccccccccCCCCcccccCCCceEEEEcCCcC----CCCCcCeeEEEEeCCCCCccccccccCCCCC-------
Q 018437 241 IHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKY----GLVYAGVGWVVWRTKDDLPDELVFHINYLGS------- 309 (356)
Q Consensus 241 l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~----l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~------- 309 (356)
+++ ++--.. +..+. .+- ..|+|.++-+++-+ +++.+..|++.++++ +.+.++ ..+-|
T Consensus 240 ~~~-~~d~la-L~ll~--~Pg---e~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~--~~R~~P---GRivG~s~D~~G 307 (954)
T PRK12566 240 ACV-AADLLS-LLVLT--PPG---ELGADVVLGSTQRFGVPMGYGGPHAAYFACRDD--YKRAMP---GRIIGVSRDARG 307 (954)
T ss_pred EEE-EeCHHH-HhCCC--Chh---hcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHH--HHhhCC---CCccceeecCCC
Confidence 554 432110 10011 122 34899985544433 334456899988764 222221 11111
Q ss_pred C-----------------CCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 310 D-----------------QPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 310 ~-----------------~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
. .-+ +--||-++..++..-.++.++|.+|++++.+++..+|+||+
T Consensus 308 ~~a~~l~LqtREQHIRReKAt-SNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~ 369 (954)
T PRK12566 308 NTALRMALQTREQHIRREKAN-SNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILA 369 (954)
T ss_pred CeeeehhhhHHHHHhhhcccc-chhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 0 001 12388888777788888899999999999999999999875
No 242
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.59 E-value=9.8e-15 Score=139.09 Aligned_cols=244 Identities=9% Similarity=-0.010 Sum_probs=163.7
Q ss_pred hHH-HHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 69 EPE-CDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 69 ~~~-v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.|. ..+++.+.+- .....++.+.++.+++.+.+.++++.+.+ ....+++.+||.++-.++..+...
T Consensus 15 ~~~~~~~~~~~~~~---~~~HRs~~F~~i~~e~~~~L~~l~~~~~~---~~v~~l~GsGT~a~Eaa~~nl~~~------- 81 (374)
T TIGR01365 15 RPGWSIEELKNAPL---GRSHRSKLGKEKLAEAIKKTREMLGVPAD---YLIGIVPASDTGAVEMALWSMLGC------- 81 (374)
T ss_pred CchhhHHHHhhhhc---ccCcCCHHHHHHHHHHHHHHHHHhCCCCC---cEEEEECCchHHHHHHHHHHcCCC-------
Confidence 344 4555544332 22344778889999999999999998532 123567889999998888876521
Q ss_pred cCCCCCCCeEEecCCCcch--HH-HHHHhhCCe-eEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHH
Q 018437 148 QGKPYDKPNIVTGANVQVC--WE-KFARYFEVE-LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKL 223 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s--~~-~~~~~~G~~-v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~ 223 (356)
++.+|++.. .++ +. +.++..|++ +..+..+.. -.+|+++++. + +.|.++|..|.||+..|+++
T Consensus 82 -----~g~~vLv~g--~FG~r~~~eia~~~g~~~v~~l~~~~g-~~~~~~~ve~--~---~~v~~vhnETSTGv~npv~~ 148 (374)
T TIGR01365 82 -----RGVDVLAWE--SFGKGWVTDVTKQLKLPDVRVLEAEYG-KLPDLKKVDF--K---NDVVFTWNGTTSGVRVPNGD 148 (374)
T ss_pred -----CCCeEEEEC--HHHHHHHHHHHHhcCCCCcEEEcCCCC-CCCCHHHcCC--C---CCEEEecCCCchheeccccc
Confidence 134666654 333 44 788889994 888887654 5889999873 1 23679999999999999976
Q ss_pred HHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCcccc-cc
Q 018437 224 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDEL-VF 302 (356)
Q Consensus 224 I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~-~~ 302 (356)
|...+ + +.+++||+..+.+..| +++. ++|.+..+++|++++|+|.|+++++++.+..... ..
T Consensus 149 i~~~~--~------~~lliVDavSs~g~~~-------l~~d--~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~ 211 (374)
T TIGR01365 149 FIPAD--R------EGLTICDATSAAFAQD-------LDYH--KLDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTP 211 (374)
T ss_pred ccccc--C------CCcEEEEccchhcCCC-------CChh--HCcEEEEechhccCCCCceEEEEECHHHHHHHhhcCC
Confidence 66322 5 7899999998766553 3333 5999999999999999999999998764321010 00
Q ss_pred --c-cCCCCCCC--------CCccccCCCChhHHHHHHHHHHHhCHH-HHHHHHHHHHhccCccc
Q 018437 303 --H-INYLGSDQ--------PTFTLNFSKGSSQIIAQYYQFIRLGFE-EITFTFISSLKVCPFLV 355 (356)
Q Consensus 303 --~-~~~~~~~~--------~~~~~~~tr~~~~~~~~~~~l~~lg~~-G~~~~~~~~~~~a~~l~ 355 (356)
+ +.|+.... .......|++.....++..+++.+-.+ |++++++++.+++++++
T Consensus 212 y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~ 276 (374)
T TIGR01365 212 AWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLE 276 (374)
T ss_pred CCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 0 01111000 011223455555555555666656565 89999999999988764
No 243
>PRK08637 hypothetical protein; Provisional
Probab=99.59 E-value=4.3e-14 Score=136.53 Aligned_cols=198 Identities=10% Similarity=0.022 Sum_probs=134.9
Q ss_pred HHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhC-CCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhc
Q 018437 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFN-TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (356)
Q Consensus 70 ~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g-~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (356)
+.+.+++.+........|....+...+++.+.+++.+..+ .+++ +...+++|+|+++++.+++.++.++
T Consensus 23 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~--~~~~I~it~G~~~al~~~~~~l~~~-------- 92 (388)
T PRK08637 23 SSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGK--KMSLPIVTNALTHGLSLVADLFVDQ-------- 92 (388)
T ss_pred HHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCcccccc--ccceeeEccchHHHHHHHHHHhcCC--------
Confidence 3444444432222334555666888888887777766542 2221 1124789999999999888877543
Q ss_pred CCCCCCCeEEecCCCcchHHHHHH-hhCCeeEEEEecCCccccCHHHHHHHHh----hCceEEEEecCCCcccccC---C
Q 018437 149 GKPYDKPNIVTGANVQVCWEKFAR-YFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTGEFE---D 220 (356)
Q Consensus 149 g~~~~~~~vi~s~~~h~s~~~~~~-~~G~~v~~v~~~~~~~~~d~~~L~~~i~----~~~~~v~~~~~~~~tG~~~---~ 220 (356)
+++|+++.|+|+.+...+. ..|++++.+|++.+++.+|+++|+++++ +.+.++++++|+||||.+- .
T Consensus 93 -----gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~ 167 (388)
T PRK08637 93 -----GDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKE 167 (388)
T ss_pred -----CCEEEEcCCCCccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHH
Confidence 5789999999999988754 6799999999842236789999999887 4456677888999999984 4
Q ss_pred HHHHHHHHHH-----hhhccCCCCcEEEecccccccccccCCCCccc----c-c-CCCceEEEE-cCCc-CCCCCcCeeE
Q 018437 221 VKLLHDLLTK-----KNEETGWDTPIHVDAASGGFIAPFLYPDLEWD----F-R-LPLVKSINV-SGHK-YGLVYAGVGW 287 (356)
Q Consensus 221 i~~I~~i~~~-----~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~----~-~-~~~~Ds~~~-~~hK-~l~~P~g~g~ 287 (356)
+++|+++|++ + ++++++|.+|..+... +..... + . ..++..+.+ ++.| ++.....+|+
T Consensus 168 ~~~l~~~~~~~~~~~~------~~~iI~De~Y~~l~~~---~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~ 238 (388)
T PRK08637 168 ATAIVEAIKELADAGT------KVVAVVDDAYFGLFYE---DSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGF 238 (388)
T ss_pred HHHHHHHHHHHHhcCC------cEEEEecccchhcccC---CccchhhHHHhhcccccceEEEeccccccCCCcccceEE
Confidence 5677777765 6 9999999999876531 111111 1 1 123323332 6777 5666788999
Q ss_pred EEEe
Q 018437 288 VVWR 291 (356)
Q Consensus 288 l~~~ 291 (356)
+++.
T Consensus 239 ~~~~ 242 (388)
T PRK08637 239 ITFG 242 (388)
T ss_pred EEEc
Confidence 9875
No 244
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.59 E-value=5.1e-14 Score=135.10 Aligned_cols=191 Identities=12% Similarity=-0.034 Sum_probs=136.7
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
++++.+.+++.+..... ..|.. +... ++++.+++.+|+++ ..+++|+|+++++..++.++.++
T Consensus 45 ~~~~~~~~a~~~~~~~~-~~Y~~-~~~~----~Lr~~ia~~~~~~~-----~~I~it~G~~~~l~~~~~~~~~~------ 107 (369)
T PRK08153 45 GPSPSVIAAMREAAAEI-WKYGD-PENH----DLRHALAAHHGVAP-----ENIMVGEGIDGLLGLIVRLYVEP------ 107 (369)
T ss_pred CCCHHHHHHHHHHHHHh-hcCCC-CccH----HHHHHHHHHhCCCH-----HHEEEcCCHHHHHHHHHHHhcCC------
Confidence 34567888877665421 12221 1233 45555777778876 34899999999998888776543
Q ss_pred hcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHh-hCceEEEEecCCCcccccCCHHHHH
Q 018437 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD-ENTICVAAILGSTLTGEFEDVKLLH 225 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~-~~~~~v~~~~~~~~tG~~~~i~~I~ 225 (356)
++.|+++.++|+.+...++..|++++.+|++.+ .+|++++++.+. +++++|+++.|+||||.+.+.+++.
T Consensus 108 -------gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~--~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~ 178 (369)
T PRK08153 108 -------GDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDD--REDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIV 178 (369)
T ss_pred -------CCEEEECCCcchHHHHHHHHcCCeEEEeeCCCC--CCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHH
Confidence 578999999999999888999999999998653 589999987764 5788999999999999999999998
Q ss_pred HHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCC-CCcCeeEEEEe
Q 018437 226 DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (356)
Q Consensus 226 ~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~-~P~g~g~l~~~ 291 (356)
++++.+++ ++++++|++|+.+... .. ...+. ...--.+..++.|.++ ....+|+++..
T Consensus 179 ~l~~~~~~----~~~lI~DE~y~~~~~~---~~-~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~ 238 (369)
T PRK08153 179 AFIEALPE----TTLLVLDEAYCETAPA---GA-APPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGA 238 (369)
T ss_pred HHHHhCCC----CcEEEEeCchhhhcCc---cc-chhhhhcCCCEEEEecchHhccCcchheeeeecC
Confidence 88886632 7899999999865421 11 11111 1111244556889875 55678998864
No 245
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.58 E-value=1e-13 Score=132.72 Aligned_cols=200 Identities=13% Similarity=-0.022 Sum_probs=137.3
Q ss_pred cCCCCcccccccCCCC-hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCC-CCCCCCCCeEEeCChhHHH
Q 018437 53 DGNPRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTP-VADDKTAVGVGTVGSSEAI 130 (356)
Q Consensus 53 ~~~~~~~l~~~~~~~~-~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~~~~t~Ggt~a~ 130 (356)
.+++.++|..+.+..+ ++.+.+++.+.... ..|....+..++++.+.+++.+.+|.+ .+. ..+++|+|+++++
T Consensus 25 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~--~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~---~~I~it~G~~~~i 99 (364)
T PRK07865 25 HPDGIVDLSVGTPVDPVPPVIQEALAAAADA--PGYPTTAGTPELREAIVGWLARRRGVTGLDP---AAVLPVIGSKELV 99 (364)
T ss_pred cCCCEEEcCCCCCCCCCCHHHHHHHHHHHhh--CCCCCccCCHHHHHHHHHHHHHHcCCCCCCc---ccEEEccChHHHH
Confidence 3344455555555433 46677777654432 244455677889999999999888865 321 3589999999999
Q ss_pred HHHHHHH-HHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEe
Q 018437 131 MLAGLAF-KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAI 209 (356)
Q Consensus 131 ~~al~~~-~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~ 209 (356)
..++.++ ..+ ++.|+++.++|..+...++..|++++.++. ++++.+ +++++|+++
T Consensus 100 ~~~~~~l~~~~-------------gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~--------~~~l~~---~~~~~v~~~ 155 (364)
T PRK07865 100 AWLPTLLGLGP-------------GDVVVIPELAYPTYEVGARLAGATVVRADS--------LTELGP---QRPALIWLN 155 (364)
T ss_pred HHHHHHHcCCC-------------CCEEEECCCCcccHHHHHHhcCCEEEecCC--------hhhCCc---ccceEEEEc
Confidence 8866655 222 578999999999999999999999887742 222322 567899999
Q ss_pred cCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc------CCCceEEEEcCCcCC-
Q 018437 210 LGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR------LPLVKSINVSGHKYG- 279 (356)
Q Consensus 210 ~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~------~~~~Ds~~~~~hK~l- 279 (356)
+|+||||.+.+ +++|.++|+++ ++++++|++|+.+... ......+. ...-..+..|+.|.+
T Consensus 156 ~p~NPtG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 226 (364)
T PRK07865 156 SPSNPTGRVLGVDHLRKVVAWARER------GAVVASDECYLELGWD---AEPVSILDPRVCGGDHTGLLAVHSLSKQSN 226 (364)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHc------CCEEEEecchhhhccC---CCCCccccccccCCccceEEEEeechhccC
Confidence 99999998854 67888899999 9999999999865431 10000010 001135566799986
Q ss_pred CCCcCeeEEEE
Q 018437 280 LVYAGVGWVVW 290 (356)
Q Consensus 280 ~~P~g~g~l~~ 290 (356)
.....+|+++.
T Consensus 227 ~~GlRiG~i~~ 237 (364)
T PRK07865 227 LAGYRAGFVAG 237 (364)
T ss_pred CCceeeEEEec
Confidence 44567888865
No 246
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.58 E-value=6.2e-14 Score=133.00 Aligned_cols=190 Identities=18% Similarity=0.113 Sum_probs=142.0
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhC-CCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFN-TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g-~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (356)
++++.+.+++...+.....+|+. ... ++++.+++.+| .++ ..++++.|++|.+...+++++.+
T Consensus 35 gp~~~~~~~~~~~~~~~~rYPd~--~~~----~l~~a~a~~~~~~~~-----~~V~~gnGsde~i~~l~~~~~~~----- 98 (356)
T COG0079 35 GPPPKVIEAIRAALDKLNRYPDP--DYR----ELRAALAEYYGVVDP-----ENVLVGNGSDELIELLVRAFVEP----- 98 (356)
T ss_pred CCCHHHHHHHHHHHHhhccCCCC--cHH----HHHHHHHHHhCCCCc-----ceEEEcCChHHHHHHHHHHhhcC-----
Confidence 44577788777666522222322 333 45566888888 554 34788999999999999888753
Q ss_pred HhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHH
Q 018437 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLH 225 (356)
Q Consensus 146 ~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~ 225 (356)
++.|+++.|++..|...++..|++++.||.++ +.+|++.+.+++.+++++|++++||||||..-+.++|.
T Consensus 99 --------gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~--~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~ 168 (356)
T COG0079 99 --------GDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE--FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELR 168 (356)
T ss_pred --------CCEEEEcCCChHHHHHHHHhcCCeEEEecccc--cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 46999999999999999999999999999986 89999999999999999999999999999999999999
Q ss_pred HHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCc-CCCCCcCeeEEEE
Q 018437 226 DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHK-YGLVYAGVGWVVW 290 (356)
Q Consensus 226 ~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK-~l~~P~g~g~l~~ 290 (356)
++++..++ +.++++|+||..|.-+ .....+....==.+.=++.| ++.+.-.+|+.+.
T Consensus 169 ~l~~~~~~----~~~vVvDEAY~eF~~~----~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia 226 (356)
T COG0079 169 ALLEALPE----GGLVVIDEAYIEFSPE----SSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIA 226 (356)
T ss_pred HHHHhCCC----CcEEEEeCchhhcCCc----hhhhhccCCCCEEEEEecHHhhhcchhceeeccC
Confidence 99998733 6799999999875431 10000000110133345778 5667788899654
No 247
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.57 E-value=1.9e-13 Score=132.80 Aligned_cols=192 Identities=11% Similarity=-0.002 Sum_probs=127.9
Q ss_pred CChHHHHHHHHHHhcccCCCccc---CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDE---YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~---~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (356)
.++|.+.+++.+.+......... ..+......++.+.+++++|.+. .++.++|++||..++..+...
T Consensus 60 ~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~~~-------~~~~~sG~~an~~ai~~l~~~--- 129 (407)
T PRK09064 60 GQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGKEA-------ALVFTSGYVSNDATLSTLAKL--- 129 (407)
T ss_pred CCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCCCc-------EEEECcHHHHHHHHHHHHhCC---
Confidence 44678888888777643222111 11234445567777999998643 456666788988888776431
Q ss_pred HHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHh----hCceEEEEecCCCcccccC
Q 018437 144 KRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTGEFE 219 (356)
Q Consensus 144 ~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~----~~~~~v~~~~~~~~tG~~~ 219 (356)
..+..|+.....|.+....++..|+++..++. .|+++|++.++ +++++|+++.+++++|.+.
T Consensus 130 --------~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~------~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~ 195 (407)
T PRK09064 130 --------IPDCVIFSDELNHASMIEGIRRSRCEKHIFRH------NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIA 195 (407)
T ss_pred --------CCCCEEEEeCcchHHHHHHHHHcCCcEEEECC------CCHHHHHHHHHhccCCCCeEEEEeCCCCCCcccc
Confidence 01345555667788887888877877654442 26777887775 4678999999999999999
Q ss_pred CHHHHHHHHHHhhhccCCCCcEEEecccccccc-cccCCCC-cccccCCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 220 DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-PFLYPDL-EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 220 ~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~-~~~~~~~-~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
|+++|.++|+++ ++++++|+||+.+++ +.-..-. ..++ ....|.++.+.+|.++. .| |+++.+
T Consensus 196 ~l~~i~~l~~~~------~~~livDEa~~~G~~g~~g~g~~~~~~~-~~~~div~~t~sKa~g~-~G-G~~~~~ 260 (407)
T PRK09064 196 PIAEICDLADKY------NALTYLDEVHAVGMYGPRGGGIAERDGL-MDRIDIIEGTLAKAFGV-MG-GYIAGS 260 (407)
T ss_pred CHHHHHHHHHHc------CCEEEEECCCcccccCCCCCChHHhcCC-CCCCeEEEEecchhhhc-cC-ceEecC
Confidence 999999999999 999999999974332 1100000 0111 13468887889998743 44 666553
No 248
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.57 E-value=9.7e-14 Score=127.08 Aligned_cols=223 Identities=17% Similarity=0.145 Sum_probs=151.0
Q ss_pred cCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCc----
Q 018437 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ---- 164 (356)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h---- 164 (356)
..|....+|++ ++.+-|-- ..+.+++|..|+.+++..+... +++|+.+..-|
T Consensus 60 ~NPT~~vlE~R----iAaLEGG~-------aa~a~aSG~AA~~~ai~~la~a-------------GD~iVss~~LYGGT~ 115 (426)
T COG2873 60 MNPTTDVLEER----IAALEGGV-------AALAVASGQAAITYAILNLAGA-------------GDNIVSSSKLYGGTY 115 (426)
T ss_pred cCchHHHHHHH----HHHhhcch-------hhhhhccchHHHHHHHHHhccC-------------CCeeEeeccccCchH
Confidence 35677777776 67775553 2577888899999999988664 67888776443
Q ss_pred chHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEe
Q 018437 165 VCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (356)
Q Consensus 165 ~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD 244 (356)
.-+....+.+|+++++|+.+ |++.++++|+++|++|++-.-.||.+.+-|+++|+++||++ +++++||
T Consensus 116 ~lf~~tl~~~Gi~v~fvd~~------d~~~~~~aI~~nTkavf~EtigNP~~~v~Die~ia~iAh~~------gvpliVD 183 (426)
T COG2873 116 NLFSHTLKRLGIEVRFVDPD------DPENFEAAIDENTKAVFAETIGNPGLDVLDIEAIAEIAHRH------GVPLIVD 183 (426)
T ss_pred HHHHHHHHhcCcEEEEeCCC------CHHHHHHHhCcccceEEEEeccCCCccccCHHHHHHHHHHc------CCcEEEe
Confidence 34566678889999999754 58999999999999999999999999999999999999999 9999999
Q ss_pred cccccccccccCCCCcccccCCCceEEEEcCCcCCCCC-cCeeEEEEeCCCCCcc---cc----ccccCCCCCCCCC-cc
Q 018437 245 AASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPD---EL----VFHINYLGSDQPT-FT 315 (356)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~g~g~l~~~~~~~~~~---~~----~~~~~~~~~~~~~-~~ 315 (356)
...+..++ ++| ++ .|+|.++-|..||+++. ..+|-+++-...+.-. .+ ..++.|.+-...+ +.
T Consensus 184 NT~atpyl--~rP---~~---hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g 255 (426)
T COG2873 184 NTFATPYL--CRP---IE---HGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFG 255 (426)
T ss_pred cCCCccee--cch---hh---cCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcc
Confidence 99887544 332 22 48999999999997653 3444455433322100 00 0112232221100 00
Q ss_pred ---------ccCCCChhH-HHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 316 ---------LNFSKGSSQ-IIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 316 ---------~~~tr~~~~-~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
..+-|.... ..+..+-+...|.|.+.-+++|+.++|..++
T Consensus 256 ~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA 305 (426)
T COG2873 256 NAAFIIKARVQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVA 305 (426)
T ss_pred cHHHHHHHHHHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHH
Confidence 012222211 1222344445688888888888888876553
No 249
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.57 E-value=2.7e-14 Score=136.91 Aligned_cols=158 Identities=16% Similarity=0.111 Sum_probs=118.0
Q ss_pred cCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCC----c
Q 018437 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANV----Q 164 (356)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~----h 164 (356)
..|...++|+. ++++.|.+. .+.+++|+.|+.+++.++..+ +++||++... +
T Consensus 62 ~~P~~~~lE~~----la~leg~~~-------av~~sSG~aAi~~al~all~~-------------GD~Vl~~~~~yg~t~ 117 (384)
T PRK06434 62 GNPTVQAFEEK----YAVLENAEH-------ALSFSSGMGAITSAILSLIKK-------------GKRILSISDLYGQTF 117 (384)
T ss_pred CChhHHHHHHH----HHHHhCCCc-------EEEeCCHHHHHHHHHHHHhCC-------------CCEEEEecCccchHH
Confidence 34666677766 888888864 678888899999999876432 5788887653 3
Q ss_pred chHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEE
Q 018437 165 VCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (356)
Q Consensus 165 ~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~v 243 (356)
..+...+...|++++++++++ +++.+|+ +++++|++.+++||++.+.|+++|.++|+++ + ++|
T Consensus 118 ~~~~~~~~~~Gi~v~fvd~~~~~~~~l~~--------~~tklv~~e~~snpt~~v~Di~~I~~la~~~------~--lvV 181 (384)
T PRK06434 118 YFFNKVLKTLGIHVDYIDTDRLNSLDFDP--------SNYDLIYAESITNPTLKVPDIKNVSSFCHEN------D--VIV 181 (384)
T ss_pred HHHHHHHHhcCcEEEEECCCChhheeecC--------CCeeEEEEEcCCCCCceeecHHHHHHHHHHc------C--eEE
Confidence 334466778899999999875 2233221 3688999999999999999999999999999 8 567
Q ss_pred ecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeCCC
Q 018437 244 DAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKD 294 (356)
Q Consensus 244 D~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~~~ 294 (356)
|++++..+. .. +. ..++|.++.|.||++.++.+ .|+++.++++
T Consensus 182 D~t~~s~~~--~~---pl---~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~ 226 (384)
T PRK06434 182 DATFASPYN--QN---PL---DLGADVVIHSATKYISGHSDVVMGVAGTNNKS 226 (384)
T ss_pred ECCCCCccc--CC---ch---hcCCCEEEeecccccCCCCCceEEEEecCcHH
Confidence 999865332 11 12 24899999999999988775 6777765543
No 250
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.57 E-value=1.5e-13 Score=131.50 Aligned_cols=190 Identities=14% Similarity=0.039 Sum_probs=133.3
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
++++.+.+++.+.+.. ...|.. +... ++++.+++.+++++ .++++|+|+++++.+++.++..
T Consensus 35 ~~~~~~~~a~~~~~~~-~~~Y~~-~~~~----~Lr~aia~~~~v~~-----~~I~it~G~~~~i~~~~~~l~~------- 96 (360)
T PRK07392 35 GPPESVIAAIQSALSA-LRHYPD-PDYR----ELRLALAQHHQLPP-----EWILPGNGAAELLTWAGRELAQ------- 96 (360)
T ss_pred CCCHHHHHHHHHHHHH-hhcCCC-cCHH----HHHHHHHHHhCcCh-----hhEEECCCHHHHHHHHHHHhCC-------
Confidence 3456777777766543 222322 2333 44455677778876 3489999999999888776421
Q ss_pred hcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCcc----ccCHHHHHHHHhhCceEEEEecCCCcccccCCHH
Q 018437 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYY----VMNPVKAVELVDENTICVAAILGSTLTGEFEDVK 222 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~----~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~ 222 (356)
++.|+++.|+|..+...++..|++++.+|++.+++ ..|++.+++.. ++++++++++|+||||.+-+.+
T Consensus 97 -------g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPTG~~~~~~ 168 (360)
T PRK07392 97 -------LRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPTGKLWSRE 168 (360)
T ss_pred -------CCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCCCCCcCHH
Confidence 35899999999999999999999999999975422 35677776654 4678999999999999999999
Q ss_pred HHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccc-cc-CCCceEEEEcCCcCCC-CCcCeeEEEEe
Q 018437 223 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FR-LPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (356)
Q Consensus 223 ~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~-~~~~Ds~~~~~hK~l~-~P~g~g~l~~~ 291 (356)
+|.++++++ ++ +++|++|..+..+. ....... +. .+. -.+.-|+.|.++ ....+|+++..
T Consensus 169 ~l~~l~~~~------~~-~IiDE~y~~~~~~~-~~~s~~~~~~~~~~-vi~i~S~SK~~~l~GlRiG~~v~~ 231 (360)
T PRK07392 169 AILPLLEQF------AL-VVVDEAFMDFLPPD-AEQSLIPCLAEYPN-LIILRSLTKFYSLPGLRLGYAIAH 231 (360)
T ss_pred HHHHHHHHC------CE-EEEECchhhhccCc-cccchHHHhhcCCC-EEEEEechhhhcCCchheeeeeCC
Confidence 999999998 85 67799998765321 0000000 11 111 134456899876 66889999874
No 251
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.57 E-value=1.1e-13 Score=133.27 Aligned_cols=178 Identities=14% Similarity=0.116 Sum_probs=122.6
Q ss_pred CcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcc
Q 018437 86 DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV 165 (356)
Q Consensus 86 ~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~ 165 (356)
.|..++...+||++ +++++|.+. .+.|++||.|+.+++..... .+++| +..+|.
T Consensus 73 ~Yagd~s~~~LE~~----vAe~lG~e~-------aV~v~sGTaAl~ll~~l~v~-------------pGd~V--p~n~~f 126 (460)
T PRK13237 73 AYAGSRNFYHLEET----VQEYYGFKH-------VVPTHQGRGAENLLSRIAIK-------------PGQYV--PGNMYF 126 (460)
T ss_pred hhcCCCcHHHHHHH----HHHHHCCCe-------EEEeCCHHHHHHHHHHhCCC-------------CcCEE--CCccch
Confidence 36677888888887 788889975 78999999999875432211 13443 777777
Q ss_pred hHHHH-HHhhCCeeEEEEec---------CCccccCHHHHHHHHhhC----ceEEEEecCCCccc-cc---CCHHHHHHH
Q 018437 166 CWEKF-ARYFEVELKEVKLE---------EGYYVMNPVKAVELVDEN----TICVAAILGSTLTG-EF---EDVKLLHDL 227 (356)
Q Consensus 166 s~~~~-~~~~G~~v~~v~~~---------~~~~~~d~~~L~~~i~~~----~~~v~~~~~~~~tG-~~---~~i~~I~~i 227 (356)
+-..+ +...|+.+.-+..+ +.+|.+|+++|+++|+++ +.+|.+..++|..| .. .++++|.++
T Consensus 127 ~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~el 206 (460)
T PRK13237 127 TTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVREL 206 (460)
T ss_pred HhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHH
Confidence 65555 66677743333211 345899999999999763 33566677778774 44 578999999
Q ss_pred HHHhhhccCCCCcEEEecccccccccccC-------CCCcccc-c--CCCceEEEEcCCcCCCCCcCeeEEEEeCCCCC
Q 018437 228 LTKKNEETGWDTPIHVDAASGGFIAPFLY-------PDLEWDF-R--LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (356)
Q Consensus 228 ~~~~~~~~~~~~~l~vD~a~~~~~~~~~~-------~~~~~~~-~--~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~ 296 (356)
|++| |+++|.|+|....-.-|.. +....++ + ...+|.+++|+||-+.+|.| |+++++++++.
T Consensus 207 A~~~------Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~G-G~i~t~D~eL~ 278 (460)
T PRK13237 207 CDKH------GIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIG-GFLAMNDEELF 278 (460)
T ss_pred HHHc------CCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCc-eEEEECCHHHH
Confidence 9999 9999999997644221111 1100000 0 23689999999999998885 88888886554
No 252
>PLN02452 phosphoserine transaminase
Probab=99.56 E-value=5.5e-14 Score=133.88 Aligned_cols=251 Identities=12% Similarity=-0.035 Sum_probs=165.1
Q ss_pred cCCCChHHHHHHHHHHh-ccc---CCC---cccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 64 VTTWMEPECDKLVMASI-NKN---YVD---MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 64 ~~~~~~~~v~~~i~~~~-~~~---~~~---~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
.|...++.|.+++..-+ +-+ .+. ...++.+.++.+++++.+.++++.+.+. ....+..|||.++-.+++.
T Consensus 14 GP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y---~v~~l~Gsgt~~~ea~~~n 90 (365)
T PLN02452 14 GPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNY---EVLFLQGGASTQFAAIPLN 90 (365)
T ss_pred CCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCc---eEEEEeCccHHHHHHHHHh
Confidence 34445677777765443 211 111 1235678889999999999999986421 2345557888888887777
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcch--HHHHHHhhCCeeEEEEecCCc--cccCHHHHHHHHhhCceEEEEecCC
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVC--WEKFARYFEVELKEVKLEEGY--YVMNPVKAVELVDENTICVAAILGS 212 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s--~~~~~~~~G~~v~~v~~~~~~--~~~d~~~L~~~i~~~~~~v~~~~~~ 212 (356)
+..+ ++++++-..+.++ +.+.++.+|...+.......+ ..+|+++++. +++...|.+++..
T Consensus 91 l~~~-------------~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~hnE 155 (365)
T PLN02452 91 LCKP-------------GDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEWEL--TPDAKFVHICANE 155 (365)
T ss_pred cCCC-------------CCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHcCC--CCCCcEEEECCCC
Confidence 6432 3445544455544 566677778754444222211 2467776532 3567899999999
Q ss_pred Ccccc-cCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 213 TLTGE-FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 213 ~~tG~-~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
|.+|+ +.|++++. +++++||+++..+.. ++++...++|. .++||++ +|.|.|++++|
T Consensus 156 TstGv~~~~~~~i~------------~~~lvVDa~Ss~g~~-------pidv~~~~v~~--~saqK~l-GP~Gl~~v~vr 213 (365)
T PLN02452 156 TIHGVEFKDYPDVG------------NVPLVADMSSNFLSK-------PVDVSKYGVIY--AGAQKNV-GPSGVTIVIIR 213 (365)
T ss_pred CCCcEecCcccccC------------CCeEEEECCccccCc-------ccCHHHcCEEE--Eeccccc-CCCCeEEEEEc
Confidence 99999 58877664 368999999987655 34554445555 5999988 69999999998
Q ss_pred CCCCCccccccccCCCCCC--CCCccccCCCChhHHHHHHHHHHHhCHH-HHHHHHHHHHhccCccc
Q 018437 292 TKDDLPDELVFHINYLGSD--QPTFTLNFSKGSSQIIAQYYQFIRLGFE-EITFTFISSLKVCPFLV 355 (356)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~tr~~~~~~~~~~~l~~lg~~-G~~~~~~~~~~~a~~l~ 355 (356)
++.+. ..-...+.|+... ..+..+.+|++...++++..+|+.+-.+ |++.+.+++.+++++|+
T Consensus 214 ~~~l~-~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~ 279 (365)
T PLN02452 214 KDLIG-NARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLY 279 (365)
T ss_pred HHHHh-hcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 65331 1111112222211 0112344799999999999999999876 89999999999998875
No 253
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.56 E-value=3.3e-13 Score=128.93 Aligned_cols=213 Identities=10% Similarity=-0.045 Sum_probs=141.1
Q ss_pred HHHHHHHHHHHhhhcCCCCcccccccCCCC-hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCC-CCCCC
Q 018437 39 KEAAYQVINDELMLDGNPRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTP-VADDK 116 (356)
Q Consensus 39 ~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~ 116 (356)
...+.+...+.. ..++..++|..+.+..+ ++.+.+++.+.... ..|....+..++++++.+++.+.+|.+ .+.
T Consensus 6 ~~~~~~~~~~~~-~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~--~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~-- 80 (357)
T TIGR03539 6 WDSLAPYKAKAA-SHPDGIVDLSVGTPVDPVPPLIRAALAAAADA--PGYPQTWGTPELREAIVDWLERRRGVPGLDP-- 80 (357)
T ss_pred HHHHHHHHHHhh-hCCCCeEEccCCCCCCCCCHHHHHHHHHHHhh--CCCCcccCCHHHHHHHHHHHHHhcCCCCCCc--
Confidence 344444444432 23333456665555433 46677777655432 234444577889999999999887765 322
Q ss_pred CCCeEEeCChhHHHHHHHHHH-HHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHH
Q 018437 117 TAVGVGTVGSSEAIMLAGLAF-KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKA 195 (356)
Q Consensus 117 ~~~~~~t~Ggt~a~~~al~~~-~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L 195 (356)
..+++|+|+++++..++.++ .++ +++|++++++|+.+...++..|++++.++ |++.+
T Consensus 81 -~~I~it~G~~~~i~~~~~~l~~~~-------------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--------~~~~l 138 (357)
T TIGR03539 81 -TAVLPVIGTKELVAWLPTLLGLGP-------------GDTVVIPELAYPTYEVGALLAGATPVAAD--------DPTEL 138 (357)
T ss_pred -CeEEEccChHHHHHHHHHHHcCCC-------------CCEEEECCCCcHHHHHHHHhcCCEEeccC--------Chhhc
Confidence 35889999999988877655 222 57899999999999999999999887664 22222
Q ss_pred HHHHhhCceEEEEecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc--CC----
Q 018437 196 VELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LP---- 266 (356)
Q Consensus 196 ~~~i~~~~~~v~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~---- 266 (356)
. .+++++|++++|+||||.+-+ +++|.++|+++ ++++++|++|+.+.. .+.....+. ..
T Consensus 139 ~---~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~---~~~~~~~~~~~~~~~~~ 206 (357)
T TIGR03539 139 D---PVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARER------GAVVASDECYLELGW---EGRPVSILDPRVCGGDH 206 (357)
T ss_pred C---ccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHc------CeEEEEecchhhhcc---CCCCccceecccCCCcc
Confidence 2 247889999999999999865 66789999999 999999999975432 111000010 00
Q ss_pred CceEEEEcCCcCC-CCCcCeeEEEE
Q 018437 267 LVKSINVSGHKYG-LVYAGVGWVVW 290 (356)
Q Consensus 267 ~~Ds~~~~~hK~l-~~P~g~g~l~~ 290 (356)
.-..+..|..|.+ .....+|+++.
T Consensus 207 ~~vi~~~S~SK~~~~~G~R~G~~i~ 231 (357)
T TIGR03539 207 TGLLAVHSLSKRSNLAGYRAGFVAG 231 (357)
T ss_pred ccEEEEeccccccCCCceeEEEEec
Confidence 0124555799975 45566898875
No 254
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.56 E-value=3.8e-13 Score=130.53 Aligned_cols=202 Identities=12% Similarity=0.034 Sum_probs=137.5
Q ss_pred CcccccccCCC-ChHHHHHHHHHHhccc-----CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHH
Q 018437 57 RLNLASFVTTW-MEPECDKLVMASINKN-----YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAI 130 (356)
Q Consensus 57 ~~~l~~~~~~~-~~~~v~~~i~~~~~~~-----~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~ 130 (356)
.++|+.+.+.. +++.+.+++.+.+... ...|...++...+++++.+++.+. ++++ ..+++|+|+++++
T Consensus 35 ~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~-~~~~-----d~I~it~Ga~~al 108 (402)
T TIGR03542 35 IIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG-RIDP-----EEIFISDGAKCDV 108 (402)
T ss_pred eEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc-CCCH-----HHEEECCCcHHHH
Confidence 35566655543 3567788877766531 123444567778887766654322 4554 3489999999998
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCC-----------eeEEEEecC-CccccCHHHHHHH
Q 018437 131 MLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEV-----------ELKEVKLEE-GYYVMNPVKAVEL 198 (356)
Q Consensus 131 ~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~-----------~v~~v~~~~-~~~~~d~~~L~~~ 198 (356)
... ..+.. .+++|+++.|+|..+...++..|+ +++.+|+++ +.+.+|++.
T Consensus 109 ~~l-~~l~~-------------~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---- 170 (402)
T TIGR03542 109 FRL-QSLFG-------------SDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE---- 170 (402)
T ss_pred HHH-HHhcC-------------CCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc----
Confidence 764 33322 146899999999999999999999 889999864 235555432
Q ss_pred HhhCceEEEEecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCC---ceEE
Q 018437 199 VDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPL---VKSI 271 (356)
Q Consensus 199 i~~~~~~v~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~---~Ds~ 271 (356)
.+++++|++++|+||||.+-+ +++|.++|+++ ++++++|++|..+... +.....+. ... .-.+
T Consensus 171 -~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~------~~~iI~De~y~~~~~~---~~~~~~~~~~~~~~~~vi~ 240 (402)
T TIGR03542 171 -EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEH------GSLILFDAAYSAFISD---PSLPHSIFEIPGAKECAIE 240 (402)
T ss_pred -cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHc------CeEEEEEchhhhhccC---CCCCcchhhCCCCcccEEE
Confidence 146889999999999999966 78899999999 9999999999875431 11111111 111 1233
Q ss_pred EEcCCcCCC-CCcCeeEEEEeC
Q 018437 272 NVSGHKYGL-VYAGVGWVVWRT 292 (356)
Q Consensus 272 ~~~~hK~l~-~P~g~g~l~~~~ 292 (356)
.-|+.|.++ ....+|+++...
T Consensus 241 ~~SfSK~~g~pGlRiG~~i~~~ 262 (402)
T TIGR03542 241 FRSFSKTAGFTGVRLGWTVVPK 262 (402)
T ss_pred EecCccccCCCCcceEEEEecH
Confidence 457889874 567899998743
No 255
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.56 E-value=1.8e-14 Score=127.93 Aligned_cols=241 Identities=15% Similarity=0.099 Sum_probs=160.1
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
-|..+..++|.++.- .--.|.+.+.+.+||.+ .|+++|-+. +.|.++||++|++++++-+..
T Consensus 33 ~PTdeMr~am~eA~v-gDdVyGeD~tt~rLE~~----vA~l~GKEA-------gLFv~SGTmgNllaIm~Hc~~------ 94 (384)
T KOG1368|consen 33 VPTDEMRRAMAEASV-GDDVYGEDPTTNRLEQR----VAELFGKEA-------GLFVPSGTMGNLLAIMVHCHQ------ 94 (384)
T ss_pred CChHHHHHHHhhccc-CcccccCCccHHHHHHH----HHHHhCccc-------eeeecccccccHHHHHHHhcC------
Confidence 344567777765542 22346778888899887 788888876 899999999999999988763
Q ss_pred hcCCCCCCCeEEecCCCcchHHHH---HHhhCCeeEEEEecCCccccCHHHHHHHHhh--------CceEEEEecCCCcc
Q 018437 147 EQGKPYDKPNIVTGANVQVCWEKF---ARYFEVELKEVKLEEGYYVMNPVKAVELVDE--------NTICVAAILGSTLT 215 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~h~s~~~~---~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~--------~~~~v~~~~~~~~t 215 (356)
.+.+||+.+..|.-.... ..+.|+-++.|...+ ++.||+++++.++.. -|++|++-.-.+.+
T Consensus 95 ------rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~-dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~ 167 (384)
T KOG1368|consen 95 ------RGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNEN-DGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNC 167 (384)
T ss_pred ------CCceEEeccchheeehhccChhhhccceeEeeeeCC-CCeeeHHHHHHhhcCCCCCccCCCceEEEeecccccc
Confidence 145899999999653332 234566677777665 499999999999973 26889888888888
Q ss_pred c-ccCCH---HHHHHHHHHhhhccCCCCcEEEeccc--ccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEE
Q 018437 216 G-EFEDV---KLLHDLLTKKNEETGWDTPIHVDAAS--GGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVV 289 (356)
Q Consensus 216 G-~~~~i---~~I~~i~~~~~~~~~~~~~l~vD~a~--~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~ 289 (356)
| .+-|+ ++|.++|+++ |+.+|.|||- .+.+. .. .+..--..-+||+++...|.+++|.|+-++
T Consensus 168 Gg~vlPle~~~~v~~lak~~------glkLH~DGARi~NAava---sg-V~vk~i~~~fDSVsiCLSKglgAPVGSViV- 236 (384)
T KOG1368|consen 168 GGKVLPLEELDRVKALAKRH------GLKLHMDGARIFNAAVA---SG-VPVKKICSAFDSVSICLSKGLGAPVGSVIV- 236 (384)
T ss_pred CceEeeHHHHHHHHHHHhcc------CCeeecchhhhhhHHHH---cC-CCHHHHHHhhhhhhhhhhccCCCCcccEEE-
Confidence 8 66665 5678899999 9999999983 22211 11 111111346899999999999999985443
Q ss_pred EeCCCCCccccccccCCCCCCCCCccccCCCChh-HHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 290 WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS-QIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~-~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
.++.+..+.--+ -.-+++ |-|+.. .+++...+|+.-- .-++...++..++|+|+
T Consensus 237 -G~k~FI~kA~~~-RKalGG--------GmRQsGvLaaaaLval~~~~-~~L~~dHk~A~~lAe~~ 291 (384)
T KOG1368|consen 237 -GSKDFIDKARHF-RKALGG--------GMRQSGVLAAAALVALDENV-PLLRADHKRAKELAEYI 291 (384)
T ss_pred -ccHHHHHHHHHH-HHHhcC--------chhHHHHHHHHHHHHhhcch-HHHHHHHHHHHHHHHHh
Confidence 343333222000 011233 344333 2333444444432 36677777777777775
No 256
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.55 E-value=4.1e-13 Score=130.49 Aligned_cols=190 Identities=11% Similarity=-0.023 Sum_probs=129.4
Q ss_pred ChHHHHHHHHHHhcccCCCcccC---cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q 018437 68 MEPECDKLVMASINKNYVDMDEY---PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (356)
.+|.+.+++.+.++........+ .+......++.+.+++++|.+. .++.++|++||..++.++...
T Consensus 60 ~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~-------~~~~~SG~~An~~ai~~l~~~---- 128 (406)
T PRK13393 60 QHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGKEA-------ALLFTSGYVSNWAALSTLGSR---- 128 (406)
T ss_pred CCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCCCc-------EEEeCCcHHHHHHHHHHhhcC----
Confidence 45788888888876533222111 1233455677788999998753 566666678999888865321
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHh----hCceEEEEecCCCcccccCC
Q 018437 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTGEFED 220 (356)
Q Consensus 145 ~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~----~~~~~v~~~~~~~~tG~~~~ 220 (356)
..++.|++....|.++...+...|.+++.++. .|++.+++.+. +++++|+++++++++|.+.|
T Consensus 129 -------~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~------~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~ 195 (406)
T PRK13393 129 -------LPGCVILSDELNHASMIEGIRHSRAEKRIFRH------NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAP 195 (406)
T ss_pred -------CCCCEEEEccchhHHHHHHHHHcCCeEEEeCC------CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhC
Confidence 01356777788999998888888887776653 25666776664 35678999999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCcEEEecccccccc-cccCCC-CcccccCCCceEEEEcCCcCCCCCcCeeEEEE
Q 018437 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-PFLYPD-LEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (356)
Q Consensus 221 i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~-~~~~~~-~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~ 290 (356)
+++|.++|+++ ++++++|++|+.+++ +.-..- ....+ ....|.+..+.-|.++.+ | |+++.
T Consensus 196 l~~i~~l~~~~------~~~livDea~~~g~~g~~G~g~~~~~~~-~~~~~i~~~tlsKa~g~~-G-G~~~~ 258 (406)
T PRK13393 196 IAEICDVAEKH------GAMTYLDEVHAVGLYGPRGGGIAEREGL-ADRLTIIEGTLAKAFGVM-G-GYITG 258 (406)
T ss_pred HHHHHHHHHHc------CCEEEEECCccccccCCCCCchhhhcCC-CCCCeEEEEeCchhhccc-C-ceeeC
Confidence 99999999999 999999999984442 211000 00111 234677767889987543 3 66653
No 257
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.55 E-value=1e-13 Score=132.79 Aligned_cols=166 Identities=19% Similarity=0.104 Sum_probs=125.1
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCC-CeEEecCCCcchHHHHHHhhCCe
Q 018437 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDK-PNIVTGANVQVCWEKFARYFEVE 177 (356)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~-~~vi~s~~~h~s~~~~~~~~G~~ 177 (356)
++++.+++++|+++ ..+++|+|+++++.+++.++..+ + +.|+++.++|..+...++..|++
T Consensus 63 ~lr~~ia~~~~~~~-----~~I~~t~G~~~~l~~~~~~~~~~-------------g~~~vlv~~p~y~~~~~~~~~~g~~ 124 (364)
T PRK04781 63 GLRSALAALYGCAP-----EQLLIGRGSDEAIDLLVRALCVP-------------GRDAVLVTPPVFGMYAVCARLQNAP 124 (364)
T ss_pred HHHHHHHHHhCcCh-----HHEEEeCCHHHHHHHHHHHhcCC-------------CCCeEEEcCCChHHHHHHHHHcCCE
Confidence 55566788888876 34899999999999988877542 3 57999999988888888999999
Q ss_pred eEEEEecC--CccccCHHHHHHHH-hhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccc
Q 018437 178 LKEVKLEE--GYYVMNPVKAVELV-DENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (356)
Q Consensus 178 v~~v~~~~--~~~~~d~~~L~~~i-~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (356)
++.+|+++ +++.+|++++.+++ .+++++|++++|+||||.+.+.+++.++++...+ ++++++|++|+.+...
T Consensus 125 ~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~----~~~iI~Deay~~f~~~- 199 (364)
T PRK04781 125 LVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQG----KALVVVDEAYGEFSDV- 199 (364)
T ss_pred EEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCC----CcEEEEeCcchhhcCC-
Confidence 99999842 34678999986554 5688999999999999999999999999886522 6899999999875421
Q ss_pred cCCCCcccc-c-CCCceEEEEcCCcCCC-CCcCeeEEEEe
Q 018437 255 LYPDLEWDF-R-LPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (356)
Q Consensus 255 ~~~~~~~~~-~-~~~~Ds~~~~~hK~l~-~P~g~g~l~~~ 291 (356)
+. .... . .+++ .+.-++.|.++ ....+|+++..
T Consensus 200 --~~-~~~~~~~~~~v-i~~~SfSK~~gl~GlRvGy~v~~ 235 (364)
T PRK04781 200 --PS-AVGLLARYDNL-AVLRTLSKAHALAAARIGSLIAN 235 (364)
T ss_pred --cc-hHHHHhhCCCE-EEEecChhhcccccceeeeeeCC
Confidence 10 0111 1 1222 34467899765 66889998863
No 258
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.55 E-value=2.3e-13 Score=132.36 Aligned_cols=197 Identities=13% Similarity=-0.067 Sum_probs=129.8
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.+....... ...+......++.+.+++++|.+. ..+++++||++|+..++.+++...
T Consensus 53 ~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~-----~~v~~~~sgsea~~~al~~~~~~~------ 120 (413)
T cd00610 53 NHPEVVEALKEQLAKLTHFS-LGFFYNEPAVELAELLLALTPEGL-----DKVFFVNSGTEAVEAALKLARAYT------ 120 (413)
T ss_pred CCHHHHHHHHHHHHhCcCcc-CcccCCHHHHHHHHHHHHhCCCCC-----CEEEEcCcHHHHHHHHHHHHHHHc------
Confidence 45778888887775432211 111345667788888999998643 238899999999999999887531
Q ss_pred cCCCCCCCeEEecCCCcch-HHHHHHhhC------------CeeEEEEecCC-----ccccCHHHHHHHHhh---CceEE
Q 018437 148 QGKPYDKPNIVTGANVQVC-WEKFARYFE------------VELKEVKLEEG-----YYVMNPVKAVELVDE---NTICV 206 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s-~~~~~~~~G------------~~v~~v~~~~~-----~~~~d~~~L~~~i~~---~~~~v 206 (356)
.+++|++.++.++. ........+ .+++.+|.+.. ++..|+++|++.+++ ++++|
T Consensus 121 -----~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v 195 (413)
T cd00610 121 -----GRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAV 195 (413)
T ss_pred -----CCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEE
Confidence 14567776655444 333332222 23566666521 245689999999976 46677
Q ss_pred EEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCC
Q 018437 207 AAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY 282 (356)
Q Consensus 207 ~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P 282 (356)
+++..++++|.+.+ +++|.++|+++ ++++++|++|+++.. .......+......|.++++ |+++++
T Consensus 196 i~~p~~~~~G~~~~~~~~l~~l~~l~~~~------~~~li~Dev~~g~g~--~g~~~~~~~~~~~~d~~t~s--K~l~~g 265 (413)
T cd00610 196 IVEPIQGEGGVIVPPPGYLKALRELCRKH------GILLIADEVQTGFGR--TGKMFAFEHFGVEPDIVTLG--KGLGGG 265 (413)
T ss_pred EEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CcchhhHhhcCCCCCeEEEc--ccccCc
Confidence 77777777798877 99999999999 999999999986421 11000111111134666554 998877
Q ss_pred cCeeEEEEe
Q 018437 283 AGVGWVVWR 291 (356)
Q Consensus 283 ~g~g~l~~~ 291 (356)
..+|+++.+
T Consensus 266 ~~~g~~~~~ 274 (413)
T cd00610 266 LPLGAVLGR 274 (413)
T ss_pred cccEEEEEc
Confidence 889998765
No 259
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.55 E-value=4.4e-14 Score=142.78 Aligned_cols=166 Identities=13% Similarity=-0.022 Sum_probs=131.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH-HHhhCC
Q 018437 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF-ARYFEV 176 (356)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~-~~~~G~ 176 (356)
.+..+..|++||.+. .-.+++|+|.+|..++.++..+ ++.|++....|-|+.+. +.+.|+
T Consensus 177 ~eAq~~AA~~fgAd~------tyFlvNGTS~gn~a~i~a~~~~-------------Gd~VLvdRN~HKSv~hgaLiLsGa 237 (720)
T PRK13578 177 KDAQKHAAKVFNADK------TYFVLNGTSASNKVVTNALLTP-------------GDLVLFDRNNHKSNHHGALIQAGA 237 (720)
T ss_pred HHHHHHHHHHhCCCc------eEEEeCChhHHHHHHHHHhcCC-------------CCEEEeecccHHHHHHHHHHHcCC
Confidence 356677999999986 2578889999999999888754 68999999999999995 889999
Q ss_pred eeEEEEecCCc----cccCH-----HHHHHHHhhC----------ceEEEEecCCCcccccCCHHHHHHH-HHHhhhccC
Q 018437 177 ELKEVKLEEGY----YVMNP-----VKAVELVDEN----------TICVAAILGSTLTGEFEDVKLLHDL-LTKKNEETG 236 (356)
Q Consensus 177 ~v~~v~~~~~~----~~~d~-----~~L~~~i~~~----------~~~v~~~~~~~~tG~~~~i~~I~~i-~~~~~~~~~ 236 (356)
.+++++...+. +.+++ +.++++|.+. .+++++++||.. |.+.|++.|+++ ++.+
T Consensus 238 ~PVYl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYd-G~~ydi~~I~~~~~h~~----- 311 (720)
T PRK13578 238 TPVYLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYD-GTIYNARQVVDKIGHLC----- 311 (720)
T ss_pred eEEEeeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCc-ceeecHHHHHHHhhccC-----
Confidence 99999865321 34454 4488888754 478999999887 999999999998 6777
Q ss_pred CCCcEEEecccccccccccCCC----CcccccCCCce----EEEEcCCcCCCCCcCeeEEEEeCC
Q 018437 237 WDTPIHVDAASGGFIAPFLYPD----LEWDFRLPLVK----SINVSGHKYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 237 ~~~~l~vD~a~~~~~~~~~~~~----~~~~~~~~~~D----s~~~~~hK~l~~P~g~g~l~~~~~ 293 (356)
+ ++|||+|||+... +.+. .+..+ ..++| .++-|.||.+.+-..++++.+++.
T Consensus 312 -~-~llvDEAhgah~~--F~p~~~~~p~~al-~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~ 371 (720)
T PRK13578 312 -D-YILFDSAWVGYEQ--FIPMMADCSPLLL-ELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDN 371 (720)
T ss_pred -C-cEEEeCcchhhhc--cCcccccCChhhh-hcCCCCCCeEEEEChhhcchhhhhHhhhhcCCc
Confidence 7 9999999998654 3331 11111 34888 999999999988899999988764
No 260
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.55 E-value=3.9e-13 Score=131.04 Aligned_cols=213 Identities=16% Similarity=0.113 Sum_probs=141.4
Q ss_pred cccccccCCC-C--hHHHHHHHHHHhccc-----CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHH
Q 018437 58 LNLASFVTTW-M--EPECDKLVMASINKN-----YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEA 129 (356)
Q Consensus 58 ~~l~~~~~~~-~--~~~v~~~i~~~~~~~-----~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a 129 (356)
++|+.+.+.. + .+.+.+++...++.. ...|....+...+++.+.+++.+.+|++.+. ..+++|+|++++
T Consensus 33 i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~---~~I~it~Ga~~a 109 (416)
T PRK09440 33 IMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISP---QNIALTNGSQSA 109 (416)
T ss_pred eeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCh---hhEEEccChHHH
Confidence 4555555442 1 235667776665432 1235455577899999999999888876422 458999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCeEEe-cCCCcchHHHHHHhhC----CeeEEEEecCC--ccccCHHHHHHHHhhC
Q 018437 130 IMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFE----VELKEVKLEEG--YYVMNPVKAVELVDEN 202 (356)
Q Consensus 130 ~~~al~~~~~~~~~~~~~~g~~~~~~~vi~-s~~~h~s~~~~~~~~G----~~v~~v~~~~~--~~~~d~~~L~~~i~~~ 202 (356)
+.+++.++.+. +.+..++.|++ ..|+|+.|...+...| .++..++++.+ ++.+|+++|+ +.++
T Consensus 110 l~~~~~~l~~~--------~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~ 179 (416)
T PRK09440 110 FFYLFNLFAGR--------RADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDED 179 (416)
T ss_pred HHHHHHHHhcc--------ccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCCC
Confidence 99888877531 00112468998 6999999887665433 33344455432 3689999997 4567
Q ss_pred ceEEEEecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCC
Q 018437 203 TICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG 279 (356)
Q Consensus 203 ~~~v~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l 279 (356)
++++++++|+||||.+.+ +++|.++|+++ ++++++|++|+.+............. .+++ .+..|+.|.+
T Consensus 180 ~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~------~~~iI~De~Y~~~~~~~~~~~~~~~~-~~~v-I~~~SfSK~~ 251 (416)
T PRK09440 180 TGAICVSRPTNPTGNVLTDEELEKLDALARQH------NIPLLIDNAYGPPFPGIIFSEATPLW-NPNI-ILCMSLSKLG 251 (416)
T ss_pred ceEEEEecCCCCCCccCCHHHHHHHHHHHHHc------CCcEEEeCCccccCCCcchhhcCccc-cCCe-EEEecccccC
Confidence 889999999999999965 67888899999 99999999997432110000000000 1121 3345789987
Q ss_pred CCCcCeeEEEEe
Q 018437 280 LVYAGVGWVVWR 291 (356)
Q Consensus 280 ~~P~g~g~l~~~ 291 (356)
.....+|+++..
T Consensus 252 ~pGlRiG~~i~~ 263 (416)
T PRK09440 252 LPGVRCGIVIAD 263 (416)
T ss_pred CCcceEEEEeCC
Confidence 777889998753
No 261
>PLN02822 serine palmitoyltransferase
Probab=99.55 E-value=3e-13 Score=133.81 Aligned_cols=210 Identities=14% Similarity=0.043 Sum_probs=139.7
Q ss_pred cCCCCcccccccC-C-CChHHHHHHHHHHhcccCCCccc---CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChh
Q 018437 53 DGNPRLNLASFVT-T-WMEPECDKLVMASINKNYVDMDE---YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (356)
Q Consensus 53 ~~~~~~~l~~~~~-~-~~~~~v~~~i~~~~~~~~~~~~~---~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt 127 (356)
+|+..++|.++.. . ..+|.+.+++.+++.....++.. .-+......++.+.+++++|.+. .+++++|++
T Consensus 107 ~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~~------~i~~s~G~~ 180 (481)
T PLN02822 107 NGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTPD------SILYSYGLS 180 (481)
T ss_pred CCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCCCC------EEEECCHHH
Confidence 3443345544322 1 24578888888888753332221 22445666677788999998753 366777766
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHh--hCc-
Q 018437 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVD--ENT- 203 (356)
Q Consensus 128 ~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~--~~~- 203 (356)
++..++.++.++ ++.|++....|+++...+.+.|.+++.++.++ +++..+++++++... +++
T Consensus 181 -a~~sai~a~~~~-------------gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~ 246 (481)
T PLN02822 181 -TIFSVIPAFCKK-------------GDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLR 246 (481)
T ss_pred -HHHHHHHHhCCC-------------CCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCc
Confidence 666777665432 57888999999999999999999998887653 223333444433321 234
Q ss_pred eEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCC---cccccCCCceEEEEcCCcCCC
Q 018437 204 ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL---EWDFRLPLVKSINVSGHKYGL 280 (356)
Q Consensus 204 ~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~---~~~~~~~~~Ds~~~~~hK~l~ 280 (356)
++|++..+.+++|.+.|+++|.++|++| ++++++|++|+.+++.-. ... .+.+....+|.++.+..|.++
T Consensus 247 ~~Ivve~i~~~~G~i~~L~~i~~l~~k~------~~~LIvDEa~s~gvlG~~-G~G~~e~~~v~~~~~dii~~s~sKalg 319 (481)
T PLN02822 247 RYIVVEAIYQNSGQIAPLDEIVRLKEKY------RFRVLLDESNSFGVLGKS-GRGLSEHFGVPIEKIDIITAAMGHALA 319 (481)
T ss_pred EEEEEecCCCCCCCccCHHHHHHHHHHc------CCEEEEECCccccccCCC-CCChHHHcCCCCCCCeEEEecchhhhh
Confidence 6888889999999999999999999999 999999999985544200 100 011212357889999999874
Q ss_pred CCcCeeEEEEe
Q 018437 281 VYAGVGWVVWR 291 (356)
Q Consensus 281 ~P~g~g~l~~~ 291 (356)
..| |+++.+
T Consensus 320 -~~G-G~i~g~ 328 (481)
T PLN02822 320 -TEG-GFCTGS 328 (481)
T ss_pred -hCC-eEEEcC
Confidence 444 676643
No 262
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.55 E-value=2.1e-13 Score=129.13 Aligned_cols=192 Identities=17% Similarity=0.097 Sum_probs=131.9
Q ss_pred ccccccCC-CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHH
Q 018437 59 NLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF 137 (356)
Q Consensus 59 ~l~~~~~~-~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~ 137 (356)
+|..+.+. ++++.+.+++.+++.....+....++...+++.+.+++.+. ++++ ..+++|+|+++++..++.++
T Consensus 23 ~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~~~~Lr~aia~~~~~~-~~~~-----~~i~it~Ga~~~i~~~~~~~ 96 (335)
T PRK14808 23 YLALNENPFPFPEDLVDEVFRRLNSDTLRIYYDSPDEELIEKILSYLDTD-FLSK-----NNVSVGNGADEIIYVMMLMF 96 (335)
T ss_pred EecCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCCChHHHHHHHHHHhCCC-CCCc-----ceEEEcCCHHHHHHHHHHHh
Confidence 34333333 34567888887765432212112235566666655544432 1554 34899999999998888754
Q ss_pred HHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccc
Q 018437 138 KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (356)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~ 217 (356)
+.|++++|+|..+..+++..|++++.+|++++ +.++... + ++++++++++|+||||.
T Consensus 97 -----------------d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~----~-~~~~~i~i~nP~NPTG~ 153 (335)
T PRK14808 97 -----------------DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKD-LRIPEVN----V-GEGDVVFIPNPNNPTGH 153 (335)
T ss_pred -----------------CcEEECCCCHHHHHHHHHHcCCeEEEecCCCc-CCCChhH----c-cCCCEEEEeCCCCCCCC
Confidence 25899999999999999999999999999864 6666443 2 34689999999999999
Q ss_pred cCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccc-cc-CCCceEEEEcCCcCCC-CCcCeeEEEEeC
Q 018437 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FR-LPLVKSINVSGHKYGL-VYAGVGWVVWRT 292 (356)
Q Consensus 218 ~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~-~~~~Ds~~~~~hK~l~-~P~g~g~l~~~~ 292 (356)
+-+.+++.+++ ++ ++++++|++|..+.- .. ... +. .+. -.+..|..|.++ +...+|+++...
T Consensus 154 ~~s~~~l~~l~-~~------~~~ii~DE~Y~~f~~----~~-~~~~~~~~~~-vi~~~S~SK~~~l~GlRvG~~v~~~ 218 (335)
T PRK14808 154 VFEREEIERIL-KT------GAFVALDEAYYEFHG----ES-YVDLLKKYEN-LAVIRTFSKAFSLAAQRIGYVVSSE 218 (335)
T ss_pred CcCHHHHHHHH-hc------CCEEEEECchhhhcC----Cc-hHHHHHhCCC-EEEEEechhhccCcccceEEEEeCH
Confidence 99999999998 57 899999999986421 10 011 11 112 234456889876 567899998743
No 263
>PRK07505 hypothetical protein; Provisional
Probab=99.54 E-value=4.8e-13 Score=129.81 Aligned_cols=239 Identities=15% Similarity=0.055 Sum_probs=140.7
Q ss_pred CChHHHHHHHHHHhcccC-CCcccC--cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNY-VDMDEY--PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~-~~~~~~--~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (356)
+.+|.+.+++.+.+.... ..+..+ ....+...++.+.+++++|. . .++.++|++|+..++..++....
T Consensus 60 ~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~-------~~~~~sG~~a~~~ai~~~~~~~~- 130 (402)
T PRK07505 60 DTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA-S-------VLTFTSCSAAHLGILPLLASGHL- 130 (402)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC-C-------EEEECChHHHHHHHHHHHHhccc-
Confidence 345888898888776421 122111 23455667888899999987 3 45556678899888876543210
Q ss_pred HHHhcCCCCCCCeEEecCCCcchHHHHHH--hhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCH
Q 018437 144 KRKEQGKPYDKPNIVTGANVQVCWEKFAR--YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDV 221 (356)
Q Consensus 144 ~~~~~g~~~~~~~vi~s~~~h~s~~~~~~--~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i 221 (356)
. +.++..|+.....|.++..... ..+.+++.+|. .|+++|++++++++++++++.|+||+|.+.|+
T Consensus 131 ----~--~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~------~d~~~l~~~~~~~~~~~vl~~p~~~~G~~~~~ 198 (402)
T PRK07505 131 ----T--GGVPPHMVFDKNAHASLNILKGICADETEVETIDH------NDLDALEDICKTNKTVAYVADGVYSMGGIAPV 198 (402)
T ss_pred ----C--CCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC------CCHHHHHHHHhcCCCEEEEEecccccCCcCCH
Confidence 0 0112234455577887643222 23456666664 27899999998778899999999999999999
Q ss_pred HHHHHHHHHhhhccCCCCcEEEecccccccc-cccCCCC--cccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCcc
Q 018437 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIA-PFLYPDL--EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPD 298 (356)
Q Consensus 222 ~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~-~~~~~~~--~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~ 298 (356)
++|.++|+++ ++++++|++|+...+ ++-.... ......+....++.+.-|.++.+ | |++++.+++.. +
T Consensus 199 ~~i~~l~~~~------~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~-G-g~~~~~~~~~~-~ 269 (402)
T PRK07505 199 KELLRLQEKY------GLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS-G-GVIMLGDAEQI-E 269 (402)
T ss_pred HHHHHHHHHc------CCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc-C-eEEEeCCHHHH-H
Confidence 9999999999 999999999843211 1100000 01110123345555788977544 3 66654443222 1
Q ss_pred ccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHH
Q 018437 299 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITF 342 (356)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~ 342 (356)
.+.. .. ..++..++.+....+++.++++.+..+.+.+
T Consensus 270 ~~~~----~~---~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~ 306 (402)
T PRK07505 270 LILR----YA---GPLAFSQSLNVAALGAILASAEIHLSEELDQ 306 (402)
T ss_pred HHHH----hC---CCceeCCCCCHHHHHHHHHHHHHHhccCcHH
Confidence 1110 00 1112224555444566667776555444433
No 264
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.53 E-value=8.7e-14 Score=131.47 Aligned_cols=155 Identities=17% Similarity=0.035 Sum_probs=116.4
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCee
Q 018437 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (356)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v 178 (356)
++++++++++|.++ ..+++|+|+++++..+..++ .+ + .|+++.++|..+...++..|+++
T Consensus 51 ~lr~~la~~~~~~~-----~~i~~t~G~~~~i~~~~~~l-~~-------------g-~vl~~~p~y~~~~~~~~~~g~~~ 110 (330)
T TIGR01140 51 ELRAAAAAYYGLPA-----ASVLPVNGAQEAIYLLPRLL-AP-------------G-RVLVLAPTYSEYARAWRAAGHEV 110 (330)
T ss_pred HHHHHHHHHhCCCh-----hhEEECCCHHHHHHHHHHHh-CC-------------C-eEEEeCCCcHHHHHHHHHcCCEE
Confidence 55666888888865 24889999999887754332 21 3 68999999999999999999998
Q ss_pred EEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEeccccccccccc
Q 018437 179 KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (356)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (356)
+.++ |++.|++++ +++++|++++|+||||.+.+ +++|+++|+++ ++++++|++|..+...
T Consensus 111 ~~~~--------d~~~l~~~~-~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~------~~~ii~De~y~~~~~~-- 173 (330)
T TIGR01140 111 VELP--------DLDRLPAAL-EELDVLVLCNPNNPTGRLIPPETLLALAARLRAR------GGWLVVDEAFIDFTPD-- 173 (330)
T ss_pred EEeC--------CHHHHHhhc-ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhc------CCEEEEECcccccCCc--
Confidence 8876 788899988 45778999999999999987 66677888899 9999999999865431
Q ss_pred CCCCcccc-cCCCceEEEEcCCcCCCCC-cCeeEEEEeC
Q 018437 256 YPDLEWDF-RLPLVKSINVSGHKYGLVY-AGVGWVVWRT 292 (356)
Q Consensus 256 ~~~~~~~~-~~~~~Ds~~~~~hK~l~~P-~g~g~l~~~~ 292 (356)
.. ..++ ....-+.+..+++|+++.| .++|+++.++
T Consensus 174 -~~-~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~ 210 (330)
T TIGR01140 174 -AS-LAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHP 210 (330)
T ss_pred -cc-hhhHhccCCCEEEEEecchhhcCchhhhhheeCCH
Confidence 11 1111 1123456777899987633 5679998754
No 265
>PLN02483 serine palmitoyltransferase
Probab=99.52 E-value=6.8e-13 Score=131.56 Aligned_cols=165 Identities=13% Similarity=0.001 Sum_probs=113.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHH
Q 018437 93 TTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFAR 172 (356)
Q Consensus 93 ~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~ 172 (356)
......++++.+|+++|.+. .++.++|..+|..++.++..+ +++|+++++.|.++...++
T Consensus 144 ~~~~~~ele~~lA~~~g~~~-------ai~~~~G~~an~~~i~al~~~-------------Gd~Vi~d~~~h~s~~~~~~ 203 (489)
T PLN02483 144 TTKLHRELEELVARFVGKPA-------AIVFGMGYATNSTIIPALIGK-------------GGLIISDSLNHNSIVNGAR 203 (489)
T ss_pred CcHHHHHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHhCCC-------------CCEEEEcchhhHHHHHHHH
Confidence 34455567777999999753 344455677777766665432 5799999999999999999
Q ss_pred hhCCeeEEEEecCCccccCHHHHHHHHh-------hCc-----eEEE-EecCCCcccccCCHHHHHHHHHHhhhccCCCC
Q 018437 173 YFEVELKEVKLEEGYYVMNPVKAVELVD-------ENT-----ICVA-AILGSTLTGEFEDVKLLHDLLTKKNEETGWDT 239 (356)
Q Consensus 173 ~~G~~v~~v~~~~~~~~~d~~~L~~~i~-------~~~-----~~v~-~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~ 239 (356)
..|++++.++.+ |+++|++.++ +++ ++++ +....+++|.+.++++|.++|+++ ++
T Consensus 204 ~~Ga~v~~~~~~------d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~------~~ 271 (489)
T PLN02483 204 GSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKY------KA 271 (489)
T ss_pred HcCCeEEEEeCC------CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHc------CC
Confidence 999999998854 3455555443 222 4444 444558899999999999999999 99
Q ss_pred cEEEecccccccccccCCCC--cccccCCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 240 PIHVDAASGGFIAPFLYPDL--EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 240 ~l~vD~a~~~~~~~~~~~~~--~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
++++|++|+.+......... ...+....+|.+..+++|.++ +.| |+++.+
T Consensus 272 ~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g-~~G-G~i~~~ 323 (489)
T PLN02483 272 YVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFG-SCG-GYIAGS 323 (489)
T ss_pred EEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcc-cCc-eEEEcC
Confidence 99999999744321100000 012222367888899999874 445 777643
No 266
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.51 E-value=6.4e-13 Score=128.37 Aligned_cols=193 Identities=11% Similarity=0.000 Sum_probs=127.2
Q ss_pred ChHHHHHHHHHHhcccCCCccc---CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q 018437 68 MEPECDKLVMASINKNYVDMDE---YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~---~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (356)
.+|.+.+++.+++++...+... +-+......++.+.+++++|.+. .++.++|..++..++.++.++
T Consensus 13 ~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e~-------al~~~sG~~a~~~~i~~l~~~---- 81 (392)
T PLN03227 13 SSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTES-------AILYSDGASTTSSTVAAFAKR---- 81 (392)
T ss_pred CCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCCc-------EEEecCcHHHHHHHHHHhCCC----
Confidence 3467777777776542211111 11222344556666999999874 455666677777777776432
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHh-----------hCceEEEEecCCC
Q 018437 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD-----------ENTICVAAILGST 213 (356)
Q Consensus 145 ~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~-----------~~~~~v~~~~~~~ 213 (356)
+++|++++..|.++...+...+++++.++.++ .-|++.+.+.+. +++++|++..+.+
T Consensus 82 ---------GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d---~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~ 149 (392)
T PLN03227 82 ---------GDLLVVDRGVNEALLVGVSLSRANVRWFRHND---MKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYK 149 (392)
T ss_pred ---------CCEEEEeccccHHHHHHHHHcCCeEEEeCCCC---HHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcC
Confidence 67999999999999888877787777666432 113444444443 2578899999999
Q ss_pred cccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccC-CC-Cccccc-CCCceEEEEcCCcCCCCCcCeeEEEE
Q 018437 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY-PD-LEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVW 290 (356)
Q Consensus 214 ~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~-~~-~~~~~~-~~~~Ds~~~~~hK~l~~P~g~g~l~~ 290 (356)
++|.+.|+++|.++|++| |+++++|++++.+...... .- ..+.+. ..++|.++.+.+|.+ +|.| |+++.
T Consensus 150 ~~G~i~~l~~i~~l~~~~------g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~-g~~g-g~v~~ 221 (392)
T PLN03227 150 NTGTLAPLKELVALKEEF------HYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAF-GSVG-GMTVG 221 (392)
T ss_pred CCCcccCHHHHHHHHHHc------CCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhh-hccC-cEEec
Confidence 999999999999999999 9999999999743321000 00 001121 347899999999976 4554 45544
Q ss_pred e
Q 018437 291 R 291 (356)
Q Consensus 291 ~ 291 (356)
+
T Consensus 222 ~ 222 (392)
T PLN03227 222 S 222 (392)
T ss_pred C
Confidence 3
No 267
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.51 E-value=2.4e-13 Score=128.54 Aligned_cols=160 Identities=12% Similarity=-0.019 Sum_probs=117.1
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCee
Q 018437 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (356)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v 178 (356)
++++.+++.+|.++ ..+++|+|+++++.+++.. .. ...|++++|+|..+...++..|+++
T Consensus 44 ~lr~~ia~~~~~~~-----~~I~it~Gs~~~l~~~~~~-~~--------------~~~vv~~~P~y~~y~~~~~~~G~~v 103 (332)
T PRK06425 44 DIEDQIKIYTQGLK-----IKVLIGPGLTHFIYRLLSY-IN--------------VGNIIIVEPNFNEYKGYAFTHGIRI 103 (332)
T ss_pred HHHHHHHHHhCCCc-----ceEEECCCHHHHHHHHHHH-hC--------------CCcEEEeCCChHHHHHHHHHcCCeE
Confidence 56666899999986 3489999999999888753 22 1357777999999999999999999
Q ss_pred EEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEeccccccccccc
Q 018437 179 KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (356)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (356)
+.||+++ ..+|++.+++ .++++|++++|+||||.+.+ +++|.++|+++ ++++++|++|+.+...
T Consensus 104 ~~vp~~~--~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~------~~~iI~DE~Y~~~~~~-- 170 (332)
T PRK06425 104 SALPFNL--INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKK------GALLFIDEAFIDFVPN-- 170 (332)
T ss_pred EEEeCCc--ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHc------CCEEEEecchhccccc--
Confidence 9999975 4567666653 37889999999999999865 56677788889 9999999999875431
Q ss_pred CCCCcccccCC-CceEEEEcCCcCCC-CCcCeeEEEEe
Q 018437 256 YPDLEWDFRLP-LVKSINVSGHKYGL-VYAGVGWVVWR 291 (356)
Q Consensus 256 ~~~~~~~~~~~-~~Ds~~~~~hK~l~-~P~g~g~l~~~ 291 (356)
........... .--.+.-|+.|.++ ....+|+++..
T Consensus 171 ~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~ 208 (332)
T PRK06425 171 RAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATD 208 (332)
T ss_pred cchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecC
Confidence 00000111101 11233446889876 66788999864
No 268
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.51 E-value=4.1e-13 Score=126.89 Aligned_cols=250 Identities=12% Similarity=-0.072 Sum_probs=162.6
Q ss_pred cCCCChHHHHHHHHH-HhcccC---C---CcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCe-EEeCChhHHHHHHHH
Q 018437 64 VTTWMEPECDKLVMA-SINKNY---V---DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVG-VGTVGSSEAIMLAGL 135 (356)
Q Consensus 64 ~~~~~~~~v~~~i~~-~~~~~~---~---~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~-~~t~Ggt~a~~~al~ 135 (356)
.|+..++.|.+.+.+ .++-+. + -...++.+.++.+++.+.++++++.|.+ ..+ .++.|||.+.-.+.+
T Consensus 11 GPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~----y~Vlfl~GggT~~~ea~~~ 86 (364)
T PRK12462 11 GPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDE----YGVVFLQGGSSLQFSMIPM 86 (364)
T ss_pred CCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCC----CeEEEEeccHHHHHHHHHH
Confidence 344455666665554 444221 1 1123568888999999999999999752 234 455568888888877
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEE-ecCCCcch--HHHHHHhhCCeeEEEEecCC---ccccCHHHHHHHHhhCceEEEEe
Q 018437 136 AFKRKWQQKRKEQGKPYDKPNIV-TGANVQVC--WEKFARYFEVELKEVKLEEG---YYVMNPVKAVELVDENTICVAAI 209 (356)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~vi-~s~~~h~s--~~~~~~~~G~~v~~v~~~~~---~~~~d~~~L~~~i~~~~~~v~~~ 209 (356)
.+..+ +++++ +-..++.+ +.+.++.+| ++..+...+. ...++++.+ .+.++...|.+|
T Consensus 87 Nll~~-------------g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t 150 (364)
T PRK12462 87 NFSRP-------------GAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYV 150 (364)
T ss_pred HcCCC-------------CCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEc
Confidence 76532 33332 22334333 555566666 6555542111 135566665 334567889999
Q ss_pred cCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEE
Q 018437 210 LGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVV 289 (356)
Q Consensus 210 ~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~ 289 (356)
+..|.+|+..| ++.+.+ +.++++|+..+.+..| +++. ..|.+..+++|.++ |.|.++++
T Consensus 151 ~NETstGv~~~-----~~~~~~------~~llvvD~sS~~~s~p-------id~~--~~dvi~agsQKnlg-P~Gltvvi 209 (364)
T PRK12462 151 SNETVEGLQFP-----DAAGLP------DSPLIADMSSDFMSRP-------FDVE--AYGMVYAHAQKNLG-PAGVTVAI 209 (364)
T ss_pred cCCCCceEecC-----cccccC------CCeEEEEcCchhhCCC-------CChH--HccEEEeeccccCC-CCceEEEE
Confidence 99999999876 333346 8899999988764442 3433 45999999999997 99999999
Q ss_pred EeCCCCCccccccccCCCCCCC--CCccccCCCChhHHHHHHHHHHHhCHH--HHHHHHHHHHhccCccc
Q 018437 290 WRTKDDLPDELVFHINYLGSDQ--PTFTLNFSKGSSQIIAQYYQFIRLGFE--EITFTFISSLKVCPFLV 355 (356)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~tr~~~~~~~~~~~l~~lg~~--G~~~~~~~~~~~a~~l~ 355 (356)
++++.+- ......+.|+.... .......|++...+..+..+|+.+-.+ |++++.+++.+.|+.|+
T Consensus 210 vs~~al~-~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly 278 (364)
T PRK12462 210 IRRALLE-RVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLY 278 (364)
T ss_pred ECHHHHh-hccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 9875331 11111122322110 111234599999899999999999888 99999999999988764
No 269
>PRK07049 methionine gamma-lyase; Validated
Probab=99.51 E-value=7.8e-13 Score=128.94 Aligned_cols=164 Identities=16% Similarity=0.010 Sum_probs=118.9
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~ 169 (356)
.|....+|+. ++++.|.+. .++++||+.|+..++.++.++ +++|+++.+.|..+..
T Consensus 82 ~Pt~~~Le~~----lA~leg~~~-------~iv~~sG~~Ai~~~l~al~~~-------------Gd~Vv~~~p~Y~~~~~ 137 (427)
T PRK07049 82 HPNSEIVEDR----LAVYEGAES-------AALFSSGMSAIATTLLAFVRP-------------GDVILHSQPLYGGTET 137 (427)
T ss_pred CcCHHHHHHH----HHHHhCCCc-------EEEEccHHHHHHHHHHHHhCC-------------CCEEEEcCCCcccHHH
Confidence 3455555554 888888653 788999999998888877653 5789999999988766
Q ss_pred HH----HhhCCeeEEEEecCCccccCHHHHHHHHh-----hCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCc
Q 018437 170 FA----RYFEVELKEVKLEEGYYVMNPVKAVELVD-----ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTP 240 (356)
Q Consensus 170 ~~----~~~G~~v~~v~~~~~~~~~d~~~L~~~i~-----~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~ 240 (356)
.+ +.+|++++.++. ..|+++|++++. +++++|+++.|+||||.+.|+++|.++++..+.....+++
T Consensus 138 ~~~~~l~~~Gi~~v~~~~-----~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~ 212 (427)
T PRK07049 138 LLAKTFRNFGVGAVGFAD-----GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPI 212 (427)
T ss_pred HHHHHHHhcCcEEEEEeC-----CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCE
Confidence 53 456887666651 246777877774 4689999999999999999999999999982110001899
Q ss_pred EEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCC--cCeeEEEE
Q 018437 241 IHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY--AGVGWVVW 290 (356)
Q Consensus 241 l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P--~g~g~l~~ 290 (356)
+++|++|..+.. .. +. ..++|.+..|..|++++. .-.|+++.
T Consensus 213 vvvDety~~~~~--~~---pl---~~g~divv~S~SK~~gG~~glr~G~vv~ 256 (427)
T PRK07049 213 IACDNTLLGPVF--QK---PL---EHGADLSVYSLTKYVGGHSDLVAGAVLG 256 (427)
T ss_pred EEEECCcccccc--CC---cc---ccCCCEEEEcCceeecCCCCcEEEEEEC
Confidence 999999865432 11 12 236799999999998742 35677764
No 270
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.50 E-value=1.7e-13 Score=138.54 Aligned_cols=165 Identities=16% Similarity=0.114 Sum_probs=128.8
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCe
Q 018437 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE 177 (356)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~ 177 (356)
.+..+..|++||++. .-.+++|.|.+|..++.++..+ ++.|++....|-|+.+++.+.|+.
T Consensus 198 ~eAe~~AA~~fgAd~------tyfvvNGTS~~n~av~~a~~~~-------------Gd~VLvdRN~HKSv~haLilsga~ 258 (714)
T PRK15400 198 KEAEEYIARVFNADR------SYMVTNGTSTANKIVGMYSAPA-------------GSTVLIDRNCHKSLTHLMMMSDVT 258 (714)
T ss_pred HHHHHHHHHHhCCCc------EEEEeCchHHHHHHHHHHhcCC-------------CCEEEeecccHHHHHHHHHHcCCe
Confidence 356677999999986 2578888899999888887653 679999999999999999999999
Q ss_pred eEEEEecCCc----cccC-----HHHHHHHHhhC-----ceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEE
Q 018437 178 LKEVKLEEGY----YVMN-----PVKAVELVDEN-----TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (356)
Q Consensus 178 v~~v~~~~~~----~~~d-----~~~L~~~i~~~-----~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~v 243 (356)
+++++...+. +.++ ++.++++|.+. |+.+++++||.. |.+.|++.|.++|+.+ + +||
T Consensus 259 PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYd-G~~yd~~~I~~~~~~~------~--ilv 329 (714)
T PRK15400 259 PIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYD-GLLYNTDFIKKTLDVK------S--IHF 329 (714)
T ss_pred EEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCc-cEecCHHHHHHHhCCC------C--EEE
Confidence 9999875322 2345 89999999753 337889999666 9999999999999877 6 799
Q ss_pred ecccccccccccCCCCcccccC-CCc---e--EEEEcCCcCCCCCcCeeEEEEeC
Q 018437 244 DAASGGFIAPFLYPDLEWDFRL-PLV---K--SINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 244 D~a~~~~~~~~~~~~~~~~~~~-~~~---D--s~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
|+|||++.. +.+..+....+ .++ | .++-|.||.+.+-..++++.++.
T Consensus 330 DEAwgah~~--F~p~~~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg 382 (714)
T PRK15400 330 DSAWVPYTN--FSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKG 382 (714)
T ss_pred Eccchhhhc--cCcccCCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcC
Confidence 999998654 33322111111 345 4 89999999998888888888765
No 271
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.49 E-value=7.1e-13 Score=134.01 Aligned_cols=165 Identities=13% Similarity=0.079 Sum_probs=127.2
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCe
Q 018437 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE 177 (356)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~ 177 (356)
.+..+..|++||++. .-.+++|+|.+|..++.++..+ ++.|++....|-|+.+++.+.|+.
T Consensus 198 ~eAe~~aA~~fgAd~------tyfvvNGTS~~n~av~~a~~~~-------------Gd~VLvdRN~HKSv~~aLilsga~ 258 (713)
T PRK15399 198 LEAEEYIARTFGAEQ------SYIVTNGTSTSNKIVGMYAAPA-------------GSTLLIDRNCHKSLAHLLMMSDVV 258 (713)
T ss_pred HHHHHHHHHHhCCCc------EEEEeCChHHHHHHHHHHhcCC-------------CCEEEeecccHHHHHHHHHHcCCe
Confidence 355667999999986 2578889999999999888654 689999999999999999999999
Q ss_pred eEEEEecCCc----cccCH-----HHHHHHHhhC-----ceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEE
Q 018437 178 LKEVKLEEGY----YVMNP-----VKAVELVDEN-----TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (356)
Q Consensus 178 v~~v~~~~~~----~~~d~-----~~L~~~i~~~-----~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~v 243 (356)
+++++...+. +.+++ +.++++|.+. |+.+++++||.. |.+.|++.|.++| . -.++||
T Consensus 259 PVYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYd-Gi~yd~~~I~~~~--g------~~~ilv 329 (713)
T PRK15399 259 PIWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYD-GLLYNTDWIKQTL--D------VPSIHF 329 (713)
T ss_pred eEEecccccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCC-ceeeCHHHHHHHh--C------CCEEEE
Confidence 9999865321 34455 8999999752 368899999666 9999999999988 2 224589
Q ss_pred ecccccccccccCCCCc--cccc-CCCceEE---EEcCCcCCCCCcCeeEEEEeC
Q 018437 244 DAASGGFIAPFLYPDLE--WDFR-LPLVKSI---NVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 244 D~a~~~~~~~~~~~~~~--~~~~-~~~~Ds~---~~~~hK~l~~P~g~g~l~~~~ 292 (356)
|+|||++.. +.+..+ .-+. ..++|.+ +-|.||.+.+-..++++.++.
T Consensus 330 DEAhgah~~--F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~ 382 (713)
T PRK15399 330 DSAWVPYTH--FHPIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKG 382 (713)
T ss_pred eccchhhhh--cCcccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecC
Confidence 999998653 233111 1121 1257777 999999999999999999865
No 272
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.47 E-value=1.1e-12 Score=125.66 Aligned_cols=159 Identities=20% Similarity=0.066 Sum_probs=117.8
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~ 169 (356)
.|....+|+. ++++.|... .+++++|..|+..++.++.++ +++|+++...|.....
T Consensus 54 nPt~~~le~~----la~Le~g~~-------a~~~~SGmaAi~~~l~~ll~~-------------Gd~iv~~~~~Y~~t~~ 109 (386)
T PF01053_consen 54 NPTVRALEQR----LAALEGGED-------ALLFSSGMAAISAALLALLKP-------------GDHIVASDDLYGGTYR 109 (386)
T ss_dssp -HHHHHHHHH----HHHHHT-SE-------EEEESSHHHHHHHHHHHHS-T-------------TBEEEEESSSSHHHHH
T ss_pred cccHHHHHHH----HHHhhcccc-------eeeccchHHHHHHHHHhhccc-------------CCceEecCCccCcchh
Confidence 3455555554 888988864 678889999998988887653 5789988887766544
Q ss_pred HHH----hhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCC-CcEEEe
Q 018437 170 FAR----YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWD-TPIHVD 244 (356)
Q Consensus 170 ~~~----~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~-~~l~vD 244 (356)
.++ ..|+++.+++. -|+++|++++++++++|++-.|+||+..+.||++|+++||++ | ++++||
T Consensus 110 ~~~~~l~~~gv~v~~~d~------~d~~~l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~------g~~~~vVD 177 (386)
T PF01053_consen 110 LLEELLPRFGVEVTFVDP------TDLEALEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEH------GDILVVVD 177 (386)
T ss_dssp HHHHCHHHTTSEEEEEST------TSHHHHHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHT------TT-EEEEE
T ss_pred hhhhhhcccCcEEEEeCc------hhHHHHHhhccccceEEEEEcCCCcccccccHHHHHHHHHHh------CCceEEee
Confidence 444 46888877754 278999999999999999999999999999999999999999 9 999999
Q ss_pred cccccccccccCCCCcccccCCCceEEEEcCCcCCCCCc--CeeEEEEeC
Q 018437 245 AASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA--GVGWVVWRT 292 (356)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~--g~g~l~~~~ 292 (356)
..++.++. +. ++. .|+|.+..|..|++.+.. =.|++++++
T Consensus 178 nT~atp~~--~~---pL~---~GaDivv~S~TKyl~Ghsdv~~G~vv~~~ 219 (386)
T PF01053_consen 178 NTFATPYN--QN---PLE---LGADIVVHSATKYLSGHSDVMGGAVVVNG 219 (386)
T ss_dssp CTTTHTTT--C----GGG---GT-SEEEEETTTTTTTSSSE-EEEEEESS
T ss_pred ccccceee--ec---cCc---CCceEEEeeccccccCCcceeeEEEEECc
Confidence 99986533 11 222 379999999999986543 267777765
No 273
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.47 E-value=7.3e-12 Score=120.44 Aligned_cols=198 Identities=16% Similarity=-0.011 Sum_probs=126.1
Q ss_pred hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhc
Q 018437 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (356)
+|.+.+++.+++.........++ .....++.+++++++|.+. .++++||++|+..++.+++..... .
T Consensus 45 ~p~v~~a~~~~~~~~~~~~~~~~--~~~~~~l~~~la~~~g~~~-------~~~~~sg~~a~~~a~~~~~~~~~~----~ 111 (379)
T TIGR00707 45 HPKLVEALKEQLEKLVHVSNLYY--TEPQEELAEKLVEHSGADR-------VFFCNSGAEANEAALKLARKYTGD----K 111 (379)
T ss_pred CHHHHHHHHHHHhhccccccccC--CHHHHHHHHHHHhhCCCCE-------EEEeCCcHHHHHHHHHHHHHHhhc----c
Confidence 47788888777764321111121 2345567777999988763 889999999999999877542110 0
Q ss_pred CCCCCCCeEEecCCCcchHHHHHHhhCCeeE----EEEecCCcccc----CHHHHHHHHhhCceEEEEecCCCccccc--
Q 018437 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELK----EVKLEEGYYVM----NPVKAVELVDENTICVAAILGSTLTGEF-- 218 (356)
Q Consensus 149 g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~----~v~~~~~~~~~----d~~~L~~~i~~~~~~v~~~~~~~~tG~~-- 218 (356)
| ..+++|+++.+++..+...+...+.... ..++..+ ... |+++|++.+++++++|+++.+++++|..
T Consensus 112 ~--~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~l~~~~~~~~~~v~~~p~~~~~g~~~~ 188 (379)
T TIGR00707 112 G--KEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPG-FSYAPYNDIESLKKAIDDETAAVIVEPIQGEGGVNPA 188 (379)
T ss_pred C--CCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCC-ceeeCCCCHHHHHHHhhhCeeEEEEEccccCCCCccC
Confidence 0 0136888888776655544444444321 1233221 222 8999999998888999988777777754
Q ss_pred --CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 219 --EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 219 --~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
+++++|.++|+++ ++++++|++|.++... .........-...|.++ ..|.+.++.++|+++..+
T Consensus 189 ~~~~l~~i~~l~~~~------~~~~i~De~~~~~~~~--g~~~~~~~~~~~~d~~t--~sK~~~~G~riG~~~~~~ 254 (379)
T TIGR00707 189 SAEFLKALREICKDK------DALLIFDEVQTGIGRT--GKFFAYEHYGIEPDIIT--LAKGLGGGVPIGATLAKE 254 (379)
T ss_pred CHHHHHHHHHHHHHc------CCEEEEeccccCCCcc--chhhhHHhcCCCCCEEE--EcccccCCcccEEEEEcH
Confidence 2489999999999 9999999999764221 00001111111235554 579987777899988753
No 274
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.44 E-value=2e-11 Score=118.51 Aligned_cols=195 Identities=13% Similarity=0.037 Sum_probs=123.4
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
..|.+.+++.+.++........+. .....++.+.+++++|.+. .+++++|++|+..|+.+++..... .
T Consensus 58 ~~~~i~~a~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~~-------~~~~~SGs~A~e~al~~a~~~~~~---~ 125 (401)
T PRK00854 58 CHPKILAAMVEQAGRLTLTSRAFR--NDQLAPLYEELAALTGSHK-------VLPMNSGAEAVETAIKAVRKWGYE---V 125 (401)
T ss_pred CCHHHHHHHHHHHhhccccccccC--CHHHHHHHHHHHhhCCCCE-------EEEeCCcHHHHHHHHHHHHHHHHh---c
Confidence 357888888887765322211111 1233345555788877643 789999999999999999764211 1
Q ss_pred cCCCCCCCeEEecC-CCcchHHHHHHhhCC-------------eeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCC
Q 018437 148 QGKPYDKPNIVTGA-NVQVCWEKFARYFEV-------------ELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (356)
Q Consensus 148 ~g~~~~~~~vi~s~-~~h~s~~~~~~~~G~-------------~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (356)
+|.+.++++|++.. ..|-+...+.. .+. ++..+| ..|+++|++++.+++++|++..+++
T Consensus 126 ~g~~~~~~~vi~~~~~~HG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~i~~~~~aii~e~~~~ 198 (401)
T PRK00854 126 KGVPEGQAEIIVCADNFHGRTLSIVG-FSTDPDARGGFGPFTPGFRVVP------FGDAEALEAAITPNTVAFLVEPIQG 198 (401)
T ss_pred cCCCCCCceEEEECCCcCCccHHHHh-ccCCccccccCCCCCCCeEEeC------CCCHHHHHHHhCCCeEEEEEccccC
Confidence 12222234555554 44544333222 111 122222 1378999999988999999999999
Q ss_pred cccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCC-cccccCCCceEEEEcCCcCCCCC-cCeeE
Q 018437 214 LTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWDFRLPLVKSINVSGHKYGLVY-AGVGW 287 (356)
Q Consensus 214 ~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~Ds~~~~~hK~l~~P-~g~g~ 287 (356)
++|.+.| +++|.++|++| |+++++|++|.++.. .+.. ..+..-...|.++++ |++.+. +.+|+
T Consensus 199 ~~G~~~~~~~~l~~l~~l~~~~------gi~lI~DEv~~g~g~---~g~~~~~~~~g~~~D~~~~~--K~l~gg~~~ig~ 267 (401)
T PRK00854 199 EAGVIIPPAGYFTRVRELCTAN------NVTLILDEIQTGLGR---TGKLLAEEHEGIEADVTLIG--KALSGGFYPVSA 267 (401)
T ss_pred CCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhCCCC---CchHhHHhhcCCCCCEEEec--ccccCCccCeEE
Confidence 9999876 99999999999 999999999985322 1110 011111135766664 887665 35787
Q ss_pred EEEeC
Q 018437 288 VVWRT 292 (356)
Q Consensus 288 l~~~~ 292 (356)
++.++
T Consensus 268 v~~~~ 272 (401)
T PRK00854 268 VLSNS 272 (401)
T ss_pred EEEcH
Confidence 87754
No 275
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.44 E-value=1.2e-11 Score=119.80 Aligned_cols=191 Identities=12% Similarity=-0.039 Sum_probs=123.8
Q ss_pred hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhc
Q 018437 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (356)
+|.+.+++.+.+.........++. ....++.+++++++|.+. ...+.+++||++|+..++..++..
T Consensus 61 ~p~v~~ai~~~~~~~~~~~~~~~~--~~~~~la~~l~~~~~~~~----~~~v~~~~sgsea~~~al~~~~~~-------- 126 (398)
T PRK03244 61 HPAVVEAVTRQLATLGHVSNLFAT--EPQIALAERLVELLGAPE----GGRVFFCNSGAEANEAAFKLARLT-------- 126 (398)
T ss_pred CHHHHHHHHHHHHhccCccCccCC--HHHHHHHHHHHHhCCCCC----CCEEEEeCchHHHHHHHHHHHHHH--------
Confidence 478888888777642211111221 122467777888888542 124899999999999999988753
Q ss_pred CCCCCCCeEEecCCCcchH-HHHHHhhCCe------------eEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcc
Q 018437 149 GKPYDKPNIVTGANVQVCW-EKFARYFEVE------------LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (356)
Q Consensus 149 g~~~~~~~vi~s~~~h~s~-~~~~~~~G~~------------v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (356)
| +..|+..+++|+.+ ..+....|.. +..+|. .|+++|++.+.+++++|++..+++++
T Consensus 127 g----~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~~~~~~~aviiep~~~~~ 196 (398)
T PRK03244 127 G----RTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY------GDVDALAAAVDDDTAAVFLEPIQGEA 196 (398)
T ss_pred C----CCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC------CCHHHHHHhhcCCeEEEEEecccCCC
Confidence 1 24566555454433 3333333322 222221 37899999997788999999999999
Q ss_pred cccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 216 GEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 216 G~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
|.+.| +++|.++|++| |+++|+|++|.++.. ...-......-...|.+++ .|+++++..+|.++.+
T Consensus 197 G~~~~~~~~l~~l~~l~~~~------~~llI~DEv~~g~gr--~g~~~~~~~~~~~pDi~t~--sK~l~~G~~ig~~~~~ 266 (398)
T PRK03244 197 GVVPPPAGYLAAAREITDRH------GALLVLDEVQTGIGR--TGAWFAHQHDGVTPDVVTL--AKGLGGGLPIGACLAF 266 (398)
T ss_pred CCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCcc--cchHHhhhhhCCCCCEEEE--chhhhCCcccEEEEEc
Confidence 99876 89999999999 999999999976422 1000001111113566655 5998877789999886
Q ss_pred CC
Q 018437 292 TK 293 (356)
Q Consensus 292 ~~ 293 (356)
++
T Consensus 267 ~~ 268 (398)
T PRK03244 267 GP 268 (398)
T ss_pred HH
Confidence 53
No 276
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.44 E-value=2.7e-12 Score=115.63 Aligned_cols=227 Identities=15% Similarity=0.037 Sum_probs=167.0
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCC-----cch
Q 018437 92 VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANV-----QVC 166 (356)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~-----h~s 166 (356)
.-..+-+.+..+++.++|....+ .+++.+.|--++..+.++.+. ..+..||+++.. .|.
T Consensus 73 ~W~~lp~~lgdklApLiGA~~~E-----vvv~dtts~nl~k~L~aalr~-----------~~~r~vIv~E~~~fpTdly~ 136 (407)
T COG3844 73 DWFDLPERLGDKLAPLIGARAGE-----VVVTDTTSINLFKVLAAALRP-----------QEGRRVIVSEGDNFPTDLYI 136 (407)
T ss_pred chhhchhHHHHHhhhhhcCCCCc-----eEEeCCcchHHHHHHHHHhcc-----------CCCceEEeecCCCCCcchhh
Confidence 34455667888999999998744 455554444444455544332 114577777643 233
Q ss_pred HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecc
Q 018437 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (356)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a 246 (356)
....++++|+. .+- .+.++++++++++++++.+|++++.+.-||..-|+.+|..+++++ ++++.-|-|
T Consensus 137 a~g~~~~~~~~-----~~~-~~~~~P~~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~------galv~wDLA 204 (407)
T COG3844 137 AEGLADLLGIG-----YDL-EGVIAPRALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQH------GALVGWDLA 204 (407)
T ss_pred hcchhhhhccc-----ccc-eeeeChHHHHHhhccceEEEEeccccccccceeeHHHHHHHHHhc------CceEEeehh
Confidence 45566666655 222 267788999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCcccccCCCceEEEEcCCcCCCCC-cCeeEEEEeCCCCCccccccccCCCCCCCC-------------
Q 018437 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQP------------- 312 (356)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~------------- 312 (356)
++.+.+| +++...++|+-+.++||++.+. .+.+.+++.++ ......+.-..|++...+
T Consensus 205 HsaGavp-------~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~-h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga 276 (407)
T COG3844 205 HSAGAVP-------VDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPR-HRERSWPPLSGWWGHARPFAMEEVYAPGPGA 276 (407)
T ss_pred cccCCcc-------eeecccCCCeeeeeeceeccCCCCCceeEEeccc-cccccccccccccCCCCcchhhhccCcCccc
Confidence 9988773 5666679999999999998764 45566666554 333454445667776421
Q ss_pred CccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 313 TFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 313 ~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
..-++||.+....+++..+|..++.-++.++.++.+.++.|+
T Consensus 277 ~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~f 318 (407)
T COG3844 277 RRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYF 318 (407)
T ss_pred cceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHH
Confidence 012568888888899999999999999999999999888775
No 277
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.40 E-value=6.5e-12 Score=118.70 Aligned_cols=150 Identities=15% Similarity=0.003 Sum_probs=108.7
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCee
Q 018437 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (356)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v 178 (356)
++++.+++.+|.+. +++|+|+++++.+++.+ . .+++|+++.|+|..+...++..|+++
T Consensus 53 ~Lr~~ia~~~~~~~-------I~it~Gs~~al~~~~~~--~-------------~gd~v~v~~P~y~~~~~~~~~~g~~~ 110 (330)
T PRK05664 53 GLEAAARAYYGAPQ-------LLPVAGSQAAIQALPRL--R-------------APGRVGVLSPCYAEHAHAWRRAGHQV 110 (330)
T ss_pred HHHHHHHHHhCCCC-------EEECcCHHHHHHHHHHc--c-------------CCCEEEEcCCChHHHHHHHHHcCCeE
Confidence 45666888888643 89999999998776431 1 15789999999999999999999999
Q ss_pred EEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEeccccccccccc
Q 018437 179 KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (356)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (356)
+.||++ +++++++ +++++++++||||||.+.+ +++|.++|+++ ++++++|++|..+.. .
T Consensus 111 ~~v~~~---------~~~~~~~-~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~------~~~iI~DE~y~~~~~-~- 172 (330)
T PRK05664 111 RELDEA---------EVEAALD-SLDVLVVVNPNNPTGRRFDPARLLAWHARLAAR------GGWLVVDEAFMDNTP-Q- 172 (330)
T ss_pred EEechh---------hHhhhhc-CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhc------CCEEEEECCcccCCC-c-
Confidence 998864 2445553 5778899999999999966 55566667888 999999999965421 0
Q ss_pred CCCCccccc-CCCceEEEEcCCcCCC-CCcCeeEEEEe
Q 018437 256 YPDLEWDFR-LPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (356)
Q Consensus 256 ~~~~~~~~~-~~~~Ds~~~~~hK~l~-~P~g~g~l~~~ 291 (356)
+ ....+. .++ -.+.-++.|.++ ....+|+++..
T Consensus 173 -~-s~~~~~~~~~-vi~~~SfSK~~gl~GlRiG~~v~~ 207 (330)
T PRK05664 173 -H-SLAACAHRPG-LIVLRSFGKFFGLAGARLGFVLAE 207 (330)
T ss_pred -c-cccccccCCC-EEEEeeccccccCCCcceEEEEeC
Confidence 0 001111 111 134556899875 66789999874
No 278
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.39 E-value=2e-11 Score=120.23 Aligned_cols=197 Identities=15% Similarity=-0.005 Sum_probs=149.6
Q ss_pred HHHHHHHHHHhcc---c-CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHH
Q 018437 70 PECDKLVMASINK---N-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (356)
Q Consensus 70 ~~v~~~i~~~~~~---~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (356)
....+++...+.. . ...+....+...+++.+.+++....|+..+. ..+++|+|+.+|+.+++.++.++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~---~~IiiT~G~q~al~l~~~~l~~p----- 178 (459)
T COG1167 107 EALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEP---EQIVITSGAQQALDLLLRLLLDP----- 178 (459)
T ss_pred HHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCc---CeEEEeCCHHHHHHHHHHHhCCC-----
Confidence 4555555555432 2 2345555788999999999999888888643 36999999999999888887653
Q ss_pred HhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh-CceEE-EEecCCCcccccCCH--
Q 018437 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICV-AAILGSTLTGEFEDV-- 221 (356)
Q Consensus 146 ~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v-~~~~~~~~tG~~~~i-- 221 (356)
++.|++-+|+|+....+.+.+|++++.||+|+ .-+|+++|++.+.. +++++ ++-..+||||+..+.
T Consensus 179 --------Gd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~--~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~r 248 (459)
T COG1167 179 --------GDTVLVEDPTYPGALQALEALGARVIPVPVDE--DGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLER 248 (459)
T ss_pred --------CCEEEEcCCCcHHHHHHHHHcCCcEEecCCCC--CCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHH
Confidence 68999999999999999999999999999996 47999999999976 45554 466788999999776
Q ss_pred -HHHHHHHHHhhhccCCCCcEEEecccccccccccCCCC-cccccCCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 222 -KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 222 -~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
++|.++|++| ++|++-|..|+.+...- .+.. ...+...+=-.+.-++.|.+...-.+|+++..
T Consensus 249 R~~Ll~lA~~~------~~~IIEDD~y~el~~~~-~p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p 313 (459)
T COG1167 249 RKALLALAEKY------DVLIIEDDYYGELRYDG-PPPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAP 313 (459)
T ss_pred HHHHHHHHHHc------CCeEEeeCcchhhhcCC-CCCCChHhhCCCCCEEEEeeehhhcccccceeeeeCC
Confidence 5799999999 99999999999755421 1110 01111223334455688999877899999874
No 279
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.35 E-value=9.1e-12 Score=121.52 Aligned_cols=166 Identities=11% Similarity=-0.039 Sum_probs=134.6
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCee
Q 018437 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (356)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v 178 (356)
+..+..|+.+|.+.+ -.+++|.|.||...+.+...+ ++.|+++...|.|.....-+.|+.+
T Consensus 74 eAqe~aA~~fgAd~t------yFvvNGTS~ank~vi~a~~~~-------------GD~VLvdRN~HKSi~~glilaGa~P 134 (557)
T COG1982 74 EAQELAARVFGADHT------YFVVNGTSTANKAVINAVLTP-------------GDKVLVDRNCHKSIHHGLILAGATP 134 (557)
T ss_pred HHHHHHHHHhCCCce------EEEECCccHHHHHHHHhhcCC-------------CCEEEecCCccHHHHHHHHHcCCce
Confidence 566779999999862 467788888998888887654 6899999999999999999999999
Q ss_pred EEEEecCCc-----cccCHHHHHHHHhhC--c-eEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccc
Q 018437 179 KEVKLEEGY-----YVMNPVKAVELVDEN--T-ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGF 250 (356)
Q Consensus 179 ~~v~~~~~~-----~~~d~~~L~~~i~~~--~-~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~ 250 (356)
+++....+. +.++.+.+++++.+. . ++++++.|+.. |++-++++|.+.++++ ++|+.+|.+++..
T Consensus 135 vyl~p~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYd-Gv~~n~~~i~~~~~~~------~a~v~~deah~~~ 207 (557)
T COG1982 135 VYLEPSRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTYD-GVCYNLRKIVELLHHY------GAWVLYDEAHPAH 207 (557)
T ss_pred EEecCCCCccccccCCCCHHHHHHHHHhChhhheeEEEecCccc-eEeecHHHHHHHHhhc------CceEEhhhcCccc
Confidence 998874432 678999999988653 4 67888888777 9999999999999999 9999999998864
Q ss_pred cccccCCCCccccc-CCCceEEEEcCCcCCCCCcCeeEEEEeCC
Q 018437 251 IAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 251 ~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~ 293 (356)
.- +.+.. .+.. ..++|.++-|.||.+.+-..++++.+++.
T Consensus 208 ~~--~~~~l-~~~~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~ 248 (557)
T COG1982 208 FD--FSPML-PESALNGGADFVTQSTHKLLAALSQASMIHVKDG 248 (557)
T ss_pred cc--ccccC-cchhhhcCceEEEechhhhhhhhhhhHHHhhCCC
Confidence 43 22221 1222 35899999999999988889999998863
No 280
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.35 E-value=1.1e-10 Score=112.91 Aligned_cols=200 Identities=13% Similarity=-0.073 Sum_probs=125.2
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.++........+ ......++.++++++.+.+ .+.+++||++|+..++++++.....
T Consensus 48 ~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~la~~l~~~~~~~-------~v~~~~sGseA~~~al~~ar~~~~~---- 114 (389)
T PRK01278 48 AHPHLVEALKEQAEKLWHVSNLY--RIPEQERLAERLVENSFAD-------KVFFTNSGAEAVECAIKTARRYHYG---- 114 (389)
T ss_pred CCHHHHHHHHHHHHhcCcccccc--CChHHHHHHHHHHhhCCCC-------EEEEcCCcHHHHHHHHHHHHHHHHh----
Confidence 35788888887776422111111 1233345666677776543 3899999999999999998764221
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEE----EecCCccc----cCHHHHHHHHhhCceEEEEecCCCccccc-
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEV----KLEEGYYV----MNPVKAVELVDENTICVAAILGSTLTGEF- 218 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v----~~~~~~~~----~d~~~L~~~i~~~~~~v~~~~~~~~tG~~- 218 (356)
+|. .++.+|++.++.|+.+...+...+...... |..+ ++. .|++++++++++++++|++...++++|.+
T Consensus 115 ~G~-~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~l~~~l~~~~~avivep~~~~~G~~~ 192 (389)
T PRK01278 115 KGH-PERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVP-GFDQVPFGDIEALKAAITPNTAAILIEPIQGEGGIRP 192 (389)
T ss_pred cCC-CCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCC-CceEeCCCCHHHHHHhhCCCeEEEEEecccCCCCCcC
Confidence 121 123578888777666544444433332221 2111 122 58999999998889999999888887743
Q ss_pred ---CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 219 ---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 219 ---~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
+++++|.++|++| |+++++|++|.++.. ...-......-...|.++ ..|.+.+.+..|+++.++
T Consensus 193 ~~~~~l~~l~~l~~~~------g~~lI~DEv~~g~g~--~g~~~~~~~~~~~pdi~t--~sK~l~~G~~ig~~~~~~ 259 (389)
T PRK01278 193 APDEFLKGLRQLCDEN------GLLLIFDEVQCGMGR--TGKLFAHEWAGVTPDIMA--VAKGIGGGFPLGACLATE 259 (389)
T ss_pred CCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CCcceeecccCCCCCEEE--EehhccCCcceEEEEEcH
Confidence 5789999999999 999999999986432 110001111111245544 568876556688888754
No 281
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.34 E-value=8.3e-11 Score=114.47 Aligned_cols=203 Identities=14% Similarity=0.020 Sum_probs=135.7
Q ss_pred ChHHHHHHHHHHhcccCCCccc---CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHH--H
Q 018437 68 MEPECDKLVMASINKNYVDMDE---YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW--Q 142 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~---~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~--~ 142 (356)
.+|.+.++..+++......... ..+...+.+++.+.+++++|.+. .++.++|-.||+.++.++.... .
T Consensus 117 ~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~-------all~sSGy~AN~~~i~aL~~~~~~~ 189 (476)
T PLN02955 117 SHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKED-------CLVCPTGFAANMAAMVAIGSVASLL 189 (476)
T ss_pred CCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCCc-------EEEECChHHHHHHHHHHHhhccccc
Confidence 3578888888777654433332 23555666677777999999986 6777888999988887763110 0
Q ss_pred HHHHhcCCCCCCCeEEecCCCcchHHHHHHhh----CCeeEEEEecCCccccCHHHHHHHHhh---CceEEEEecCCCcc
Q 018437 143 QKRKEQGKPYDKPNIVTGANVQVCWEKFARYF----EVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLT 215 (356)
Q Consensus 143 ~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~----G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~t 215 (356)
..+. .....+++.|++-...|.|+...+++. +++++.++ -+ |+++|+++++. +.++|++...-+..
T Consensus 190 ~~~~-~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~--HN----D~~~Le~~L~~~~~~~~~Vv~EgV~Smd 262 (476)
T PLN02955 190 AASG-KPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYR--HC----DMYHLNSLLSSCKMKRKVVVTDSLFSMD 262 (476)
T ss_pred cccc-cccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeC--CC----CHHHHHHHHHhCCCCceEEEEeCCCCCC
Confidence 0000 000012346777788899999999876 35554433 22 78999988854 34677777778888
Q ss_pred cccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 216 G~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
|.+.|+++|.++|++| ++++++|+|++.+++..-..-....+. .+.+|.++.+.-|.+++.- |+++.++
T Consensus 263 GdiapL~eL~~L~~~~------ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~G--Gfi~gs~ 332 (476)
T PLN02955 263 GDFAPMEELSQLRKKY------GFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCHG--GFIACSK 332 (476)
T ss_pred CCcCCHHHHHHHHHHc------CcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhccC--ceeecHH
Confidence 9999999999999999 999999999997766321100001111 2468899999999975432 5565543
No 282
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.34 E-value=2.2e-10 Score=110.79 Aligned_cols=198 Identities=15% Similarity=-0.007 Sum_probs=125.0
Q ss_pred hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhc
Q 018437 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (356)
.|.+.+++.+.+.........+ ....+.++.++++++.|.+. .++|+||++|+..++.+++....+
T Consensus 57 ~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~la~~l~~~~~~~~-------v~~~~gg~eA~~~al~~a~~~~~~----- 122 (396)
T PRK02627 57 HPKLVEAIQEQAAKLIHTSNLY--YIEPQEELAEKLVELSGMDK-------VFFCNSGAEANEAAIKLARKYGHK----- 122 (396)
T ss_pred CHHHHHHHHHHHhhcccccccc--CCHHHHHHHHHHHhhcCCCE-------EEECCCcHHHHHHHHHHHHHHhcc-----
Confidence 4778888887765432111112 24566678888988877643 899999999999999988764210
Q ss_pred CCCCCCCeEEecCCCcchHHHHHHhhC-CeeE---EEEecCCcc----ccCHHHHHHHHhhCceEEEEecCCCcccc-c-
Q 018437 149 GKPYDKPNIVTGANVQVCWEKFARYFE-VELK---EVKLEEGYY----VMNPVKAVELVDENTICVAAILGSTLTGE-F- 218 (356)
Q Consensus 149 g~~~~~~~vi~s~~~h~s~~~~~~~~G-~~v~---~v~~~~~~~----~~d~~~L~~~i~~~~~~v~~~~~~~~tG~-~- 218 (356)
....+++|++..+++..+...+...+ .... ..++..+ . ..|+++|++++.+++++|+++.+++++|. +
T Consensus 123 -~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~l~~~i~~~~~~vii~p~~~~~G~~~~ 200 (396)
T PRK02627 123 -KGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEG-FIYVPFNDIEALKAAITDKTAAVMLEPIQGEGGVNPA 200 (396)
T ss_pred -cCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCC-ceEeCCCCHHHHHHhcCCCeEEEEEecccCCCCCccC
Confidence 00112567777666544333332222 2211 1122111 1 12899999999888999999999999884 3
Q ss_pred --CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 219 --EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 219 --~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
+.+++|.++|+++ ++++++|++|.++... .........-...|.++ ..|.+.+...+|+++.++
T Consensus 201 ~~~~l~~l~~l~~~~------~~~lI~DE~~~g~g~~--g~~~~~~~~~~~pdi~t--~sK~~~~G~rig~~~~~~ 266 (396)
T PRK02627 201 DKEYLQALRELCDEN------GILLILDEVQTGMGRT--GKLFAYQHYGIEPDIMT--LAKGLGGGVPIGAVLAKE 266 (396)
T ss_pred CHHHHHHHHHHHHHc------CCEEEEechhcCCCcc--CceeeehhcCCCCCEEE--EcchhhCCcccEEEEEcH
Confidence 3489999999999 9999999999865321 10001111111245555 458877667789988754
No 283
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.33 E-value=1.8e-10 Score=111.70 Aligned_cols=198 Identities=13% Similarity=-0.005 Sum_probs=124.0
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++......... ......++.+.++++.+.+ ...++++|++|+..|+..++..+...
T Consensus 56 h~~p~v~~ai~~~~~~~~~~~~~~--~~~~~~~l~~~l~~~~~~~-------~~~~~~SGseA~e~Alk~a~~~~~~~-- 124 (396)
T PRK04073 56 HRHPKIIQALKDQADKVTLTSRAF--HSDQLGPWYEKVAKLTGKD-------MVLPMNTGAEAVETAIKAARRWAYDV-- 124 (396)
T ss_pred CCCHHHHHHHHHHHhhcccccccc--CCHHHHHHHHHHHhcCCCC-------eEEEcCChHHHHHHHHHHHHHHhhhc--
Confidence 345888888887776432211111 1123334556677776653 27889999999999999987642211
Q ss_pred hcCCCCCCCeEEec-CCCcchHHHHHHhhCCe------------eEEEEecCCccccCHHHHHHHHhhCceEEEEecCCC
Q 018437 147 EQGKPYDKPNIVTG-ANVQVCWEKFARYFEVE------------LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (356)
Q Consensus 147 ~~g~~~~~~~vi~s-~~~h~s~~~~~~~~G~~------------v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (356)
.|....+.+|+.. ...|-....++...+-. +..+|. -|+++|++++++++++|+++.++|
T Consensus 125 -~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~i~~~~~~viiep~~~ 197 (396)
T PRK04073 125 -KGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY------GDLEALKAAITPNTAAFLVEPIQG 197 (396)
T ss_pred -cCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC------CCHHHHHHhcccCeEEEEEcCccC
Confidence 1211123456655 44555544444433311 122221 178999999988899999999999
Q ss_pred cccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCC-cCeeEE
Q 018437 214 LTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVGWV 288 (356)
Q Consensus 214 ~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~g~g~l 288 (356)
++|.+.| +++|.++|+++ |+++++|++|.++... ......+......|.+++ .|.++++ ..+|++
T Consensus 198 ~~G~~~~~~~~l~~l~~l~~~~------g~lli~DEv~~g~g~~--g~~~~~~~~~~~pdi~~~--sK~lg~gg~~ig~~ 267 (396)
T PRK04073 198 EAGINIPPEGFLKAARELCKEE------NVLFIADEIQTGLGRT--GKLFACDWDNVTPDMYIL--GKALGGGVFPISCV 267 (396)
T ss_pred CCCCccCCHHHHHHHHHHHHHc------CCEEEEecchhCCCcC--cHHHHhhhcCCCCCEEEe--cccccCCCCcceEE
Confidence 9999855 89999999999 9999999999874321 000011111123576665 5876665 668888
Q ss_pred EEeC
Q 018437 289 VWRT 292 (356)
Q Consensus 289 ~~~~ 292 (356)
+.++
T Consensus 268 ~~~~ 271 (396)
T PRK04073 268 AANR 271 (396)
T ss_pred EEcH
Confidence 7753
No 284
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.33 E-value=3e-11 Score=111.97 Aligned_cols=186 Identities=13% Similarity=0.028 Sum_probs=138.5
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~ 169 (356)
+.|...+.+++.+.+.+.-|-.... +....++|.|+|.+|...+.++.++ ++..++|.|.++.+..
T Consensus 120 y~Gl~~frqa~A~Fm~~~r~~~v~f-dP~~~Vv~~G~T~ane~l~fcLadp-------------gdafLvPtPyY~gfdr 185 (471)
T KOG0256|consen 120 YHGLPSFRQAVAEFMERARGNRVKF-DPERVVVTNGATSANETLMFCLADP-------------GDAFLVPTPYYPGFDR 185 (471)
T ss_pred ccCchHHHHHHHHHHHHHhCCCCcc-CccceEEecccchhhHHHHHHhcCC-------------CceeeecCCCCCcccc
Confidence 5688899999999999987776554 2345889999999998887777654 5789999999999987
Q ss_pred HHHh-hCCeeEEEEecC-CccccCHHHHHHHHhh------CceEEEEecCCCcccccCC---HHHHHHHHHHhhhccCCC
Q 018437 170 FARY-FEVELKEVKLEE-GYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWD 238 (356)
Q Consensus 170 ~~~~-~G~~v~~v~~~~-~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~ 238 (356)
-+++ .|++++.|.+.. ++++++.++||+++.+ +.+.|++++|+||.|++-+ +..+.+++.++ +
T Consensus 186 dl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~k------n 259 (471)
T KOG0256|consen 186 DLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRK------N 259 (471)
T ss_pred cceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhc------c
Confidence 7774 588898888865 5699999999998864 5789999999999999854 55667777888 9
Q ss_pred CcEEEecccccccccccC--C--CCccccc-CCCceEEEEcCCcCCCCC-cCeeEEEEeCCCC
Q 018437 239 TPIHVDAASGGFIAPFLY--P--DLEWDFR-LPLVKSINVSGHKYGLVY-AGVGWVVWRTKDD 295 (356)
Q Consensus 239 ~~l~vD~a~~~~~~~~~~--~--~~~~~~~-~~~~Ds~~~~~hK~l~~P-~g~g~l~~~~~~~ 295 (356)
+.+++|++|.+.+...-. . +...+.. .+.---+.++..|=++-| ...|+++..++..
T Consensus 260 iHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~V 322 (471)
T KOG0256|consen 260 IHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDV 322 (471)
T ss_pred eEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHH
Confidence 999999999887653110 0 0001111 122334567777855444 5789998776533
No 285
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.32 E-value=1.3e-10 Score=112.59 Aligned_cols=203 Identities=13% Similarity=-0.031 Sum_probs=124.4
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.++......... ......++.+.+++++|.+. ..++++|++|+..++..++......
T Consensus 48 ~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~-------~~~~~SGs~A~e~al~~~~~~~~~~--- 115 (400)
T PTZ00125 48 CHPKILAALINQAQKLTLTSRAF--YNDVLGLAEKYITDLFGYDK-------VLPMNSGAEAGETALKFARKWGYEV--- 115 (400)
T ss_pred CCHHHHHHHHHHHHhcccccccc--cCHHHHHHHHHHHhCCCCCE-------EEEeCCcHHHHHHHHHHHHHHHHhc---
Confidence 45788888887765322111111 12344566777888877653 6789999999999999887542211
Q ss_pred cCCCCCCCeEEecC-CCcchHHHHHHhhCCeeE---EEEecCC---ccccCHHHHHHHHh-hCceEEEEecCCCcccccC
Q 018437 148 QGKPYDKPNIVTGA-NVQVCWEKFARYFEVELK---EVKLEEG---YYVMNPVKAVELVD-ENTICVAAILGSTLTGEFE 219 (356)
Q Consensus 148 ~g~~~~~~~vi~s~-~~h~s~~~~~~~~G~~v~---~v~~~~~---~~~~d~~~L~~~i~-~~~~~v~~~~~~~~tG~~~ 219 (356)
.|.+..+.+|++.+ ..|-.....+...+.... ..+...+ -...|+++|+++++ +++++|++..++|++|.+.
T Consensus 116 ~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep~~~~~G~~~ 195 (400)
T PTZ00125 116 KGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEPIQGEAGVIV 195 (400)
T ss_pred cCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcCccCCCCCcc
Confidence 11111234555544 445554444443332111 0011000 01138999999996 6788999988999999987
Q ss_pred C----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCc-CeeEEEEeC
Q 018437 220 D----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA-GVGWVVWRT 292 (356)
Q Consensus 220 ~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~-g~g~l~~~~ 292 (356)
| +++|.++|++| |+++++|++|.++... ......+..-...|.++++ |++.++. ++|+++.++
T Consensus 196 ~~~~~l~~l~~l~~~~------~~lli~Dev~~g~g~~--G~~~~~~~~~~~pd~~~~s--K~l~~g~~~ig~v~~~~ 263 (400)
T PTZ00125 196 PDDGYLKQVYELCKKY------NVLLIVDEIQTGLGRT--GKLLAHDHEGVKPDIVLLG--KALSGGLYPISAVLAND 263 (400)
T ss_pred CCHHHHHHHHHHHHHc------CCEEEEeccccCCCcc--chhhHHHhcCCCCCEEEEc--ccccCCCcCcEEEEEcH
Confidence 7 99999999999 9999999998753220 0000111111134777654 9887664 789888764
No 286
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.30 E-value=6.6e-11 Score=114.89 Aligned_cols=249 Identities=11% Similarity=0.023 Sum_probs=171.6
Q ss_pred HHhcccCCCcc-cCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCe
Q 018437 78 ASINKNYVDMD-EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPN 156 (356)
Q Consensus 78 ~~~~~~~~~~~-~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~ 156 (356)
.+.|-++..|. ..++..++-.++.++++++.|+|. ...-..+|..+-..++++.|.++..+ | +..+..
T Consensus 564 ~fanIHPF~P~eQaqGY~~lf~~Le~~Lc~iTG~D~------~s~QPNsGA~GEYaGL~~IRaY~~~k----g-e~hRnv 632 (1001)
T KOG2040|consen 564 EFANIHPFAPVEQAQGYQQLFTELEKDLCEITGFDS------FSLQPNSGAQGEYAGLRVIRAYLESK----G-EGHRNV 632 (1001)
T ss_pred hhccCCCCCchHHHhhHHHHHHHHHHHhheeecccc------eeecCCCCcccchhhHHHHHHHHHhc----c-CCccee
Confidence 34444454443 356889999999999999999985 12233456677777888777764321 1 122347
Q ss_pred EEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh---CceEEEEecCCCcccccC-CHHHHHHHHHHhh
Q 018437 157 IVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFE-DVKLLHDLLTKKN 232 (356)
Q Consensus 157 vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~~-~i~~I~~i~~~~~ 232 (356)
.++|..+|-.....+.+.|.+|+.|.++.+ |.+|..+|+++.++ +-.++.+++|+|. |+++ .|++++++.++|
T Consensus 633 ClIPvSAHGTNPASA~MagmkvvpV~~~~~-G~id~~dLk~kaekh~~~Laa~MvTYPST~-GvfE~~i~d~cd~iHeh- 709 (1001)
T KOG2040|consen 633 CLIPVSAHGTNPASAAMAGMKVVPVGCDAN-GNIDMVDLKAKAEKHKDNLAALMVTYPSTH-GVFEEGIDDICDIIHEH- 709 (1001)
T ss_pred EEEeecccCCChhhHHhcCCEEEEeeccCC-CCccHHHHHHHHHHhhhhhheeEEeccccc-ccccccHHHHHHHHHhc-
Confidence 889999999999999999999999999875 99999999988875 4568889999998 9995 599999999999
Q ss_pred hccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCC-----cCeeEEEEeCCCCCccccccccCC-
Q 018437 233 EETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-----AGVGWVVWRTKDDLPDELVFHINY- 306 (356)
Q Consensus 233 ~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-----~g~g~l~~~~~~~~~~~~~~~~~~- 306 (356)
|--+..|||-=..-...++| -| .|+|..-.+.||.++.| +|.|-+.++. .+..-++.++-.
T Consensus 710 -----GGQVYlDGANMNAqVGlc~p---Gd---~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~--HLapfLP~HpVvs 776 (1001)
T KOG2040|consen 710 -----GGQVYLDGANMNAQVGLCRP---GD---IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK--HLAPFLPSHPVVS 776 (1001)
T ss_pred -----CCEEEecCCCccceecccCC---cc---ccccceeecccceeeecCCCCCCCCCccchhh--hccccCCCCCccC
Confidence 99999999842222211222 22 38999999999985544 5677788764 232222222111
Q ss_pred ---CCCCCCCccc----cCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 307 ---LGSDQPTFTL----NFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 307 ---~~~~~~~~~~----~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
.++..+--+. .|| +....-.|++++.+|..|+++.-+-++-+|.|.+
T Consensus 777 ~~~~~~~~~~gsVsaaP~Gs--a~ILpISwaYikmMG~~GL~~as~~AiLNaNYMa 830 (1001)
T KOG2040|consen 777 PGRPEDTSPVGSVSAAPWGS--ALILPISWAYIKMMGSGGLKDASKIAILNANYMA 830 (1001)
T ss_pred CCCCCCCCCccceeccCCCc--ceeehhHHHHHHHhcccccchhhHHHhhhhHHHH
Confidence 1111000000 111 1112335999999999999998888888888864
No 287
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.30 E-value=1.7e-10 Score=109.76 Aligned_cols=221 Identities=15% Similarity=0.019 Sum_probs=148.2
Q ss_pred hHHHHHHHHHHhcccCCCccc---CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHH
Q 018437 69 EPECDKLVMASINKNYVDMDE---YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~---~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (356)
+|.+.+++.+++......-.. -.+...+-.++.+.+|+++|.+. .++-++|=.||..++-++..+
T Consensus 55 ~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~-------al~f~SGy~AN~~~i~~l~~~----- 122 (388)
T COG0156 55 HPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAEA-------ALLFSSGFVANLGLLSALLKK----- 122 (388)
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCc-------EEEEcccchhHHHHHHHhcCC-----
Confidence 466777777777653222212 22455555566667999999985 444455577888877776542
Q ss_pred HhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh------CceEEEEecCCCcccccC
Q 018437 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFE 219 (356)
Q Consensus 146 ~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~ 219 (356)
++.|+.-...|.|+...++..+++++... .-|+++|++.+.+ +.++|+.-..-+..|.+.
T Consensus 123 --------~dli~~D~lnHASiidG~rls~a~~~~f~------HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiA 188 (388)
T COG0156 123 --------GDLIFSDELNHASIIDGIRLSRAEVRRFK------HNDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIA 188 (388)
T ss_pred --------CcEEEEechhhhhHHHHHHhCCCcEEEec------CCCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcC
Confidence 56788888999999999999888877654 2488999999976 257777777788899999
Q ss_pred CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCc-----ccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCC
Q 018437 220 DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-----WDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (356)
Q Consensus 220 ~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-----~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~ 294 (356)
|+++|.+++++| +.|++||+|++.+++. ++.+ +.+....+|.+..+..|.++ ..|.++.-+..
T Consensus 189 pL~~l~~L~~ky------~a~L~VDEAHa~Gv~G---~~GrG~~e~~g~~~~~vdi~~gTlsKAlG---s~Gg~v~g~~~ 256 (388)
T COG0156 189 PLPELVELAEKY------GALLYVDEAHAVGVLG---PNGRGLAEHFGLEPEEVDIIVGTLGKALG---SSGGYIAGSAA 256 (388)
T ss_pred CHHHHHHHHHHh------CcEEEEEccccccccC---CCCccHHHHhCCCCccceEEEEEchhhhc---ccCceeeCcHH
Confidence 999999999999 9999999999987763 2111 11112346899999999986 33444443332
Q ss_pred CCcccccc-ccCCCCCCCCCccccCCCChhHHHHHHHHHHHhC
Q 018437 295 DLPDELVF-HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG 336 (356)
Q Consensus 295 ~~~~~~~~-~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg 336 (356)
. .+.+.. ..+|+.. .+-+...+++...+++.+-
T Consensus 257 ~-~d~L~~~ar~~ifS--------talpP~~aaa~~~al~~l~ 290 (388)
T COG0156 257 L-IDYLRNRARPFIFS--------TALPPAVAAAALAALRILE 290 (388)
T ss_pred H-HHHHHHhCCceecc--------CCCCHHHHHHHHHHHHHHH
Confidence 2 122211 1233332 2334444666677777764
No 288
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.29 E-value=2.9e-11 Score=113.19 Aligned_cols=225 Identities=15% Similarity=0.101 Sum_probs=153.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChh-HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHh
Q 018437 95 ELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS-EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARY 173 (356)
Q Consensus 95 ~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt-~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~ 173 (356)
++-+.+...+-+..|+... ...++++.+| +++.+++.+++.+ + ....|++|...|++..+++..
T Consensus 56 ~ltn~l~~d~~~~~G~~~~----~~~~~vP~atgm~l~l~l~~l~~r-~----------~a~~Viw~ridqkSc~kai~~ 120 (389)
T PF05889_consen 56 KLTNSLVLDALRLAGLRSV----KSCFVVPMATGMSLTLCLLALRMR-P----------KAKYVIWPRIDQKSCFKAIER 120 (389)
T ss_dssp HHHHHHHHHHHHHTTHTTH----CEEEEESS-HHHHHHHHHHHHHHH-C----------T--EEEEEEEETHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCccc----cceEEEecccccHHHHHHHHHhcc-c----------CCceEEEeeccccchHHHHHh
Confidence 3444555556677888741 1235555555 6666777777621 1 135899999999999999999
Q ss_pred hCCeeEEEEe--cCCccccCHHHHHHHHhh---CceEEEEecCCCccccc-CCHHHHHHHHHHhhhccCCCCcEEEeccc
Q 018437 174 FEVELKEVKL--EEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEF-EDVKLLHDLLTKKNEETGWDTPIHVDAAS 247 (356)
Q Consensus 174 ~G~~v~~v~~--~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~-~~i~~I~~i~~~~~~~~~~~~~l~vD~a~ 247 (356)
.|++++.||. ..+....|.+.+++++++ +..+.++++.+-..|.. |++++|+++|++| |++.++.+||
T Consensus 121 AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~------~IPhlvNnAY 194 (389)
T PF05889_consen 121 AGLEPVVVENVLEGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEY------DIPHLVNNAY 194 (389)
T ss_dssp TT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHH------T--EEEEGTT
T ss_pred cCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHc------CCceEEccch
Confidence 9999999996 334467788999998864 45778888888888887 5599999999999 9999999999
Q ss_pred ccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCCCChhHHHH
Q 018437 248 GGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIA 327 (356)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~ 327 (356)
|-..... ......-.+..++|.++-+.-|.+.+|.|-+++...++... .. ....|.+.. +....+-
T Consensus 195 gvQ~~~~-~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~As~~~~~i-~~--vs~~YpGRa----------s~sp~ld 260 (389)
T PF05889_consen 195 GVQSSKC-MHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIMASFDPSGI-LA--VSKEYPGRA----------SASPSLD 260 (389)
T ss_dssp TTT-HHH-HHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEEEESSHHHH-HH--HHHTSHSHB----------TSHHHHH
T ss_pred hhhHHHH-HHHHHHHHhcCCcceeeeecCCCEEecCCCcEEEecCHHHH-HH--HHHHhhhhh----------hcccchH
Confidence 8632211 11111122246899999999999999999888876543222 11 123454442 2345777
Q ss_pred HHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 328 QYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 328 ~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
+...|..+|..|+...+....++-.||
T Consensus 261 ~~itLl~LG~~g~~~ll~~r~~~f~~l 287 (389)
T PF05889_consen 261 LFITLLSLGCTGYGALLKERKASFPYL 287 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 889999999999999999888776554
No 289
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.29 E-value=5.6e-11 Score=112.77 Aligned_cols=153 Identities=14% Similarity=0.037 Sum_probs=107.5
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCe
Q 018437 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE 177 (356)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~ 177 (356)
.++++.+++.+|++.. ..+++|+|+++++..... +.. .+.|+++.|+|..+...++..|++
T Consensus 56 ~~L~~~ia~~~~~~~~----~~I~i~~Gs~e~i~~l~~-~~~--------------~g~v~v~~P~y~~y~~~~~~~g~~ 116 (339)
T PRK06959 56 DGLAACAARYYGAPDA----AHVLPVAGSQAAIRALPA-LLP--------------RGRVGIAPLAYSEYAPAFARHGHR 116 (339)
T ss_pred HHHHHHHHHHhCCCCc----ccEEECcCHHHHHHHHHH-hcC--------------CCeEEEcCCCcHHHHHHHHHCCCE
Confidence 3677789999999741 248899999999865433 221 124888999999999999999999
Q ss_pred eEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHH---HHHhhhccCCCCcEEEecccccccccc
Q 018437 178 LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDL---LTKKNEETGWDTPIHVDAASGGFIAPF 254 (356)
Q Consensus 178 v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i---~~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (356)
++.+|.++ +. +.+.++++++++||||||.+-+.+++.++ |+++ +.++++|++|..+...
T Consensus 117 ~~~v~~~~-------~~----~~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~------~~~vI~DEay~~~~~~- 178 (339)
T PRK06959 117 VVPLDEAA-------DT----LPAALTHLIVVNPNNPTAERLPAARLLRWHAQLAAR------GGTLIVDEAFADTLPA- 178 (339)
T ss_pred EEeecccc-------hh----ccccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHc------CCEEEEECCCccCCCc-
Confidence 98887653 12 22345689999999999999776666655 5567 8899999999875321
Q ss_pred cCCCCcccc-cCCCceEEEEcCCcCCC-CCcCeeEEEEe
Q 018437 255 LYPDLEWDF-RLPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (356)
Q Consensus 255 ~~~~~~~~~-~~~~~Ds~~~~~hK~l~-~P~g~g~l~~~ 291 (356)
+.. ..+ ..+++ .+.-++.|.++ +...+|+++..
T Consensus 179 --~s~-~~~~~~~~v-i~l~SfSK~~gl~GlRiGy~v~~ 213 (339)
T PRK06959 179 --ASL-AAHTDRPGL-VVLRSVGKFFGLAGVRAGFVLAA 213 (339)
T ss_pred --ccc-hhccCCCCE-EEEecChhhcCCcchheEEEecC
Confidence 100 111 11221 34557899775 66789999864
No 290
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.28 E-value=5.6e-11 Score=111.85 Aligned_cols=157 Identities=24% Similarity=0.113 Sum_probs=120.4
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----
Q 018437 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC---- 166 (356)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s---- 166 (356)
|....+|. .++++.|... ....++|..|+..++..+... +++++.+...|.-
T Consensus 77 Pt~~~le~----~iaal~ga~~-------~l~fsSGmaA~~~al~~L~~~-------------g~~iV~~~~~Y~gT~~~ 132 (409)
T KOG0053|consen 77 PTRDVLES----GIAALEGAAH-------ALLFSSGMAAITVALLHLLPA-------------GDHIVATGDVYGGTLRI 132 (409)
T ss_pred CchHHHHH----HHHHHhCCce-------EEEecccHHHHHHHHHHhcCC-------------CCcEEEeCCCcccHHHH
Confidence 44444544 4899998874 566777777888888777532 5678877655543
Q ss_pred HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecc
Q 018437 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (356)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a 246 (356)
+.+....+|++...++++ |++.+++++++++++|++-.|+||+..+-||++|.++|+++ |+.++||..
T Consensus 133 l~~~~~~~gie~~~vd~~------~~~~~~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~------g~~vvVDnT 200 (409)
T KOG0053|consen 133 LRKFLPKFGGEGDFVDVD------DLKKILKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKY------GFLVVVDNT 200 (409)
T ss_pred HHHHHHHhCceeeeechh------hHHHHHHhhccCceEEEEECCCCCccccccHHHHHHHHhhC------CCEEEEeCC
Confidence 445555778888888775 46889999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEe
Q 018437 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWR 291 (356)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~ 291 (356)
+++++. ..+ + ..|||.++-|.-||+++... .|+++.+
T Consensus 201 f~~p~~--~~p---L---~lGADIV~hSaTKyi~Ghsdvi~G~iv~n 239 (409)
T KOG0053|consen 201 FGSPYN--QDP---L---PLGADIVVHSATKYIGGHSDVIGGSVVLN 239 (409)
T ss_pred cCcccc--cCh---h---hcCCCEEEEeeeeeecCCcceeeeEEecC
Confidence 987533 222 1 23799999999999877542 3666654
No 291
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.26 E-value=9.5e-11 Score=111.39 Aligned_cols=159 Identities=18% Similarity=0.051 Sum_probs=120.4
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchH--
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCW-- 167 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~-- 167 (356)
.|....+|+. ++.+-|... ++.+++|..|+..+++++.++ +++|+++...|...
T Consensus 62 nPT~~~lE~~----~a~LEg~~~-------~~afsSGmaAI~~~~l~ll~~-------------GD~vl~~~~~YG~t~~ 117 (396)
T COG0626 62 NPTRDALEEA----LAELEGGED-------AFAFSSGMAAISTALLALLKA-------------GDHVLLPDDLYGGTYR 117 (396)
T ss_pred CccHHHHHHH----HHHhhCCCc-------EEEecCcHHHHHHHHHHhcCC-------------CCEEEecCCccchHHH
Confidence 4566666655 788877764 778888899998888877653 58899888876553
Q ss_pred --HHHHHhhCCeeEEEEecCCccccCHHHHHHHHh-hCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEe
Q 018437 168 --EKFARYFEVELKEVKLEEGYYVMNPVKAVELVD-ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (356)
Q Consensus 168 --~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~-~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD 244 (356)
.+..+.+|+++.+++.. |.+++++++. ++|++|++-.|+||+..+.||++|+++|+++ |+.++||
T Consensus 118 ~~~~~l~~~gi~~~~~d~~------~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~------g~~vvVD 185 (396)
T COG0626 118 LFEKILQKFGVEVTFVDPG------DDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAY------GALVVVD 185 (396)
T ss_pred HHHHHHHhcCeEEEEECCC------ChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhc------CCEEEEE
Confidence 34444568888877643 3456677776 5899999999999999999999999999999 9999999
Q ss_pred cccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeC
Q 018437 245 AASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRT 292 (356)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~ 292 (356)
..++.++. .. ++ ..|+|.+.-|.-|++.+... .|+++.++
T Consensus 186 NTfatP~~--q~---PL---~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~ 227 (396)
T COG0626 186 NTFATPVL--QR---PL---ELGADIVVHSATKYLGGHSDVLGGVVLTPN 227 (396)
T ss_pred CCcccccc--cC---hh---hcCCCEEEEeccccccCCcceeeeEEecCh
Confidence 99987554 22 22 24899999999999877643 35454444
No 292
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.22 E-value=3e-10 Score=104.71 Aligned_cols=149 Identities=13% Similarity=0.071 Sum_probs=124.7
Q ss_pred cCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCC
Q 018437 83 NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN 162 (356)
Q Consensus 83 ~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~ 162 (356)
..+.|+.+++..-+++.+.+.+.+.=|.+.+ ...+..|+|+|.|+.+.+..+... .++-|++|-|
T Consensus 105 s~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~---p~dI~LT~GAS~ai~~il~l~~~~------------~~~GvliPiP 169 (475)
T KOG0258|consen 105 SLGAYSDSQGVPGVRKHVAEFIERRDGIPAD---PEDIFLTTGASPAIRSILSLLIAG------------KKTGVLIPIP 169 (475)
T ss_pred cccccccccCChhHHHHHHHHHHhccCCCCC---HHHeeecCCCcHHHHHHHHHHhcC------------CCCceEeecC
Confidence 4456788899999999999999999996542 345899999999998888777542 2467999999
Q ss_pred CcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhh-----CceEEEEecCCCccccc---CCHHHHHHHHHHhhh
Q 018437 163 VQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDE-----NTICVAAILGSTLTGEF---EDVKLLHDLLTKKNE 233 (356)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~-----~~~~v~~~~~~~~tG~~---~~i~~I~~i~~~~~~ 233 (356)
-|+-|...+..+|...+..-+|+ .+|.+|.++|++.+++ +++++++.+|-||||.+ ..+++|..+|.++
T Consensus 170 QYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~-- 247 (475)
T KOG0258|consen 170 QYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEE-- 247 (475)
T ss_pred CCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHc--
Confidence 99999999999998877666665 4699999999999875 57888899999999998 6789999999999
Q ss_pred ccCCCCcEEEecccccccc
Q 018437 234 ETGWDTPIHVDAASGGFIA 252 (356)
Q Consensus 234 ~~~~~~~l~vD~a~~~~~~ 252 (356)
+++++.|++|-.-+.
T Consensus 248 ----~l~llaDEVYQ~Nvy 262 (475)
T KOG0258|consen 248 ----GLVLLADEVYQDNVY 262 (475)
T ss_pred ----CeEEechHHHHhhcc
Confidence 999999999865444
No 293
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.21 E-value=3.8e-10 Score=107.77 Aligned_cols=192 Identities=13% Similarity=0.077 Sum_probs=123.8
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
|++...++|.. .--.|..+|...+||+. +++++|.+. .+.|..|..++..++.+...+
T Consensus 55 pS~~m~aAM~~----GDD~Y~gdpSv~~Lee~----vael~G~E~-------alpthqGRgaE~Il~~~~~~~------- 112 (467)
T TIGR02617 55 VTQSMQAAMMR----GDEAYSGSRSYYALAES----VKNIFGYQY-------TIPTHQGRGAEQIYIPVLIKK------- 112 (467)
T ss_pred CCHHHHHHHHc----CCcccccCchHHHHHHH----HHHHhCCce-------EEECCCCchHHHHHHHhhccc-------
Confidence 45555555543 22236667787778766 788999985 788888899999998877642
Q ss_pred cCCCCCCCeE-------EecCCCcch-HHHHHHhhCCeeEEEEec--------C-CccccCHHHHHHHHhh----CceEE
Q 018437 148 QGKPYDKPNI-------VTGANVQVC-WEKFARYFEVELKEVKLE--------E-GYYVMNPVKAVELVDE----NTICV 206 (356)
Q Consensus 148 ~g~~~~~~~v-------i~s~~~h~s-~~~~~~~~G~~v~~v~~~--------~-~~~~~d~~~L~~~i~~----~~~~v 206 (356)
+ ++++ +++...|+- ..-.+.+.|+.++.++.+ . .+|.+|+++|+++|.+ +...+
T Consensus 113 ~-----g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v 187 (467)
T TIGR02617 113 R-----EQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYI 187 (467)
T ss_pred c-----cccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceee
Confidence 0 1222 334445544 234566778887776432 1 2489999999999984 23333
Q ss_pred EEecCCCcc-ccc---CCHHHHHHHHHHhhhccCCCCcEEEeccccc---ccc----cccCCCCccccc---CCCceEEE
Q 018437 207 AAILGSTLT-GEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGG---FIA----PFLYPDLEWDFR---LPLVKSIN 272 (356)
Q Consensus 207 ~~~~~~~~t-G~~---~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~---~~~----~~~~~~~~~~~~---~~~~Ds~~ 272 (356)
..+..+|.. |.+ ++++++.++|++| |+.+|.|||=-. .++ +-..+....++. ...+|+++
T Consensus 188 ~~tlt~N~~GGqpvslenlr~V~~la~~~------GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt 261 (467)
T TIGR02617 188 VATITCNSAGGQPVSLANLKAVYEIAKKY------DIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLA 261 (467)
T ss_pred eeeEEEecCCCEEeCHHHHHHHHHHHHHc------CCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEE
Confidence 333333443 444 6778999999999 999999997321 110 000111111111 25799999
Q ss_pred EcCCcCCCCCcCeeEEEEeCC
Q 018437 273 VSGHKYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 273 ~~~hK~l~~P~g~g~l~~~~~ 293 (356)
+|..|-+++|.| |+++.+++
T Consensus 262 ~slsKglgApvG-g~Lag~d~ 281 (467)
T TIGR02617 262 MSAKKDAMVPMG-GLLCFKDD 281 (467)
T ss_pred EEcCCCCCCccc-ceEEecch
Confidence 999999999998 67777776
No 294
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.21 E-value=9.9e-10 Score=100.59 Aligned_cols=258 Identities=12% Similarity=0.016 Sum_probs=160.3
Q ss_pred CChHHHHHHHHHHhcccC--CC-----cccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCe--EEeCChhHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNY--VD-----MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVG--VGTVGSSEAIMLAGLAF 137 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~--~~-----~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~--~~t~Ggt~a~~~al~~~ 137 (356)
+....+.|++-+.+++.. +. |....-..++|.-+++..-+.||++++ .|| +-..+||-||+.+..++
T Consensus 51 Fts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~----kWGVNVQp~SGSPANfavYtal 126 (477)
T KOG2467|consen 51 FTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPE----KWGVNVQPYSGSPANFAVYTAL 126 (477)
T ss_pred chHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHH----HCceeeccCCCCchhhHHHhhh
Confidence 344678888888776421 11 222335678888899999999999983 344 44558899999888877
Q ss_pred HHHHHHHHHhcCCCCCCCeEE---ecCCCcch--HHHHHHhhCCe-----eEEEEecCCccccCHHHHHHHHhh-CceEE
Q 018437 138 KRKWQQKRKEQGKPYDKPNIV---TGANVQVC--WEKFARYFEVE-----LKEVKLEEGYYVMNPVKAVELVDE-NTICV 206 (356)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~vi---~s~~~h~s--~~~~~~~~G~~-----v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v 206 (356)
..+ .++|. +|+-.|-+ |..-.+-..+. -....+|+.+|-+|-|.|++.... +|++|
T Consensus 127 l~P-------------h~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~i 193 (477)
T KOG2467|consen 127 LKP-------------HERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLI 193 (477)
T ss_pred cCC-------------CCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcCCcEE
Confidence 654 23333 45656644 22111211111 122334666799999999987654 67766
Q ss_pred EEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCee
Q 018437 207 AAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVG 286 (356)
Q Consensus 207 ~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g 286 (356)
+ ++.+..-..-|...+.+||.+. |.+|++|.|+-.+... ....+-- .+.+|.++...||.+-+|.| |
T Consensus 194 i--aG~SaY~R~~DYaR~R~Iad~~------gA~Lm~DMAHISgLVA--A~vipsP--Fey~DiVTTTTHKsLRGPRg-~ 260 (477)
T KOG2467|consen 194 I--AGTSAYSRLIDYARFRKIADKV------GAYLMADMAHISGLVA--AGVIPSP--FEYCDIVTTTTHKSLRGPRG-A 260 (477)
T ss_pred E--eccccchhhccHHHHHHHHHhc------CceeehhhhhHHHHHh--cccCCCc--ccccceeeccccccccCCcc-e
Confidence 5 4444445567899999999999 9999999997443331 1111112 34799999999999999998 6
Q ss_pred EEEEeCCCCCcccc-ccccCCCCCC----CCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 287 WVVWRTKDDLPDEL-VFHINYLGSD----QPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 287 ~l~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
++++|+.-.-...- .....|-.-. ..-+.++|-+--..+.++..+|+.-....+++..++-..+|+.|
T Consensus 261 mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakal 333 (477)
T KOG2467|consen 261 MIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKAL 333 (477)
T ss_pred eEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 66677642211100 0001111000 01123455554445888889999888777777766666666554
No 295
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.19 E-value=4.7e-09 Score=101.88 Aligned_cols=196 Identities=14% Similarity=0.013 Sum_probs=120.5
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.+.......... ......++.+.+++++|.+. ..++++|++||..|+..++....+.
T Consensus 54 ~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~l~~~l~~~~~~~~-------~~~~~SGs~A~e~ai~~a~~~~~~~--- 121 (401)
T TIGR01885 54 CHPKIVKALTEQAQKLTLSSRAF--YNDVFGEFAEYVTKLFGYDK-------VLPMNTGAEAVETAIKLARKWGYKV--- 121 (401)
T ss_pred CCHHHHHHHHHHHHhcccccccc--CCHHHHHHHHHHHhhcCCCE-------EEEeCccHHHHHHHHHHHHHHhhhh---
Confidence 35788888887765422111111 22334456667888887653 7889999999999999987753211
Q ss_pred cCCCCCCCeEEecCCC-cchHHHHHHhhCC------------eeEEEEecCCccccCHHHHHHHHh---hCceEEEEecC
Q 018437 148 QGKPYDKPNIVTGANV-QVCWEKFARYFEV------------ELKEVKLEEGYYVMNPVKAVELVD---ENTICVAAILG 211 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~-h~s~~~~~~~~G~------------~v~~v~~~~~~~~~d~~~L~~~i~---~~~~~v~~~~~ 211 (356)
+|....+..|+..... |-+....+...|- ++..+|. -|+++|+++++ ++..+|++...
T Consensus 122 ~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~le~~l~~~~~~~~avi~E~v 195 (401)
T TIGR01885 122 KGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY------NNLEALEEALEDHGPNVCAFIVEPI 195 (401)
T ss_pred cCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC------CCHHHHHHHHHhcCCCEEEEEEeCc
Confidence 1111223566665555 4444444443221 1222221 16889998886 35567888888
Q ss_pred CCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCC-cCee
Q 018437 212 STLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVG 286 (356)
Q Consensus 212 ~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~g~g 286 (356)
.+++|.+.| +++|.++|++| ++++++|++|.++.. .......+..-...|.++++ |.+.+. +.+|
T Consensus 196 ~~~~G~~~~~~~~l~~l~~l~~~~------~~lli~DEv~~g~g~--~G~~~~~~~~~~~~di~~~g--K~l~~g~~~ig 265 (401)
T TIGR01885 196 QGEAGVVVPDDGYLKKVRELCTKH------NVLLIADEIQTGLGR--TGKLLCVDHENVKPDIVLLG--KALSGGVYPVS 265 (401)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--cchhhHHhhcCCCCCEEEee--ccccCCCCCcE
Confidence 888999876 99999999999 999999999865321 11000111111246777765 877654 4577
Q ss_pred EEEEe
Q 018437 287 WVVWR 291 (356)
Q Consensus 287 ~l~~~ 291 (356)
+++.+
T Consensus 266 ~v~~~ 270 (401)
T TIGR01885 266 AVLAD 270 (401)
T ss_pred EEEEc
Confidence 77764
No 296
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.19 E-value=2.5e-09 Score=102.87 Aligned_cols=192 Identities=16% Similarity=-0.004 Sum_probs=119.9
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.+....... .....+++.++.+++++..+.+ ..+++++|++|+..|+..++..
T Consensus 46 ~~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~la~~l~~~~~~~-------~~~~~~sG~~a~~~A~~~a~~~------- 109 (377)
T PRK02936 46 CHPTVTKAVQEQLDDIWHVS--NLFTNSLQEEVASLLAENSAGD-------LVFFCNSGAEANEAALKLARKH------- 109 (377)
T ss_pred CCHHHHHHHHHHHHhccccc--cccCCHHHHHHHHHHHhcCCCC-------EEEEeCCcHHHHHHHHHHHHHh-------
Confidence 45778888888776432211 1223466777777787776543 2789999999999999977642
Q ss_pred cCCCCCCCeEEecCCC-cchHHHHHHhhCCeeE---EEEecCC-ccc--cCHHHHHHHHhhCceEEEEecCCCcccccC-
Q 018437 148 QGKPYDKPNIVTGANV-QVCWEKFARYFEVELK---EVKLEEG-YYV--MNPVKAVELVDENTICVAAILGSTLTGEFE- 219 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~-h~s~~~~~~~~G~~v~---~v~~~~~-~~~--~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~- 219 (356)
.| +.+|++.+.. |-+..-.....+.... ..|...+ ... -|+++|++.+.+++++|++....++.|...
T Consensus 110 ~g----~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~~~~G~~~~ 185 (377)
T PRK02936 110 TG----KSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQGEGGVIPA 185 (377)
T ss_pred cC----CCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEecccCCCCCccC
Confidence 11 3457666554 4443333333232110 1111110 001 178999999988888999988888877663
Q ss_pred ---CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc--CCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 220 ---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 220 ---~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
.+++|.++|++| ++++++|++|.++.. ... .+.+. -...|.++ ..|.+.+.+..|+++.+
T Consensus 186 ~~~~l~~l~~l~~~~------~~~lI~DEv~~g~g~---~g~-~~~~~~~~~~~di~t--~sK~l~~G~~ig~v~~~ 250 (377)
T PRK02936 186 DPAFLQEVQTLCKKF------GALLIIDEVQTGIGR---TGT-LFAYEQFGLDPDIVT--VAKGLGNGIPVGAMIGK 250 (377)
T ss_pred CHHHHHHHHHHHHHc------CCEEEEeccccCCCc---Cch-hhHHHhhCCCCcEEE--EcccccCCCccEEEEEc
Confidence 399999999999 999999999976422 111 11111 11235544 67987655567888764
No 297
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.18 E-value=6.2e-09 Score=100.73 Aligned_cols=200 Identities=11% Similarity=-0.081 Sum_probs=123.7
Q ss_pred hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhc
Q 018437 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (356)
.|.+.+++.+.+........ ....+.+.++.+++.+..+.+ ...++++|+||+..|+..++....+
T Consensus 54 ~p~v~~a~~~q~~~~~~~~~--~~~~~~~~~la~~l~~~~~~~-------~v~f~~SGseA~e~Aik~ar~~~~~----- 119 (395)
T PRK03715 54 NPGMVEALAAQAEKLINPSP--AFYNEPMAKLAGLLTQHSCFD-------KVFFANSGAEANEGAIKLARKWGRK----- 119 (395)
T ss_pred CHHHHHHHHHHHHhcccccc--cccCHHHHHHHHHHhhccCCC-------EEEEeCCcHHHHHHHHHHHHHHhhc-----
Confidence 47888888777653221111 122455667777777654433 3789999999999999999864211
Q ss_pred CCCCCCCeEEec-CCCcchHHHHHHhhCCeeE---EEEecCC---ccccCHHHHHHHHhhCceEEEEecCCCcccccCC-
Q 018437 149 GKPYDKPNIVTG-ANVQVCWEKFARYFEVELK---EVKLEEG---YYVMNPVKAVELVDENTICVAAILGSTLTGEFED- 220 (356)
Q Consensus 149 g~~~~~~~vi~s-~~~h~s~~~~~~~~G~~v~---~v~~~~~---~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~- 220 (356)
+. ..+.+||.. ...|-+..-++...|.... ..|.... .-.-|+++|++.+.+++.+|++.......|.+-|
T Consensus 120 ~~-~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~Epv~~~gG~~~~~ 198 (395)
T PRK03715 120 HK-NGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVMLEPVQGEGGVIPAT 198 (395)
T ss_pred cC-CCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCCceEEEEeCCcCCCCCccCC
Confidence 00 112455544 4566665555555443211 1111110 0124789999999878888888887777777766
Q ss_pred ---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCC
Q 018437 221 ---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 221 ---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~ 293 (356)
+++|.++|++| ++++++|+++.|+.. ...-...+..-...|.++++ |.+++....|.++.+++
T Consensus 199 ~~~l~~l~~l~~~~------~~llI~DEv~tG~GR--tG~~~a~~~~gv~PDi~t~g--K~lg~G~p~~av~~~~~ 264 (395)
T PRK03715 199 REFMQQLRALTKQH------GLLLIVDEVQTGCGR--TGTLFAYELSGIEPDIMTLG--KGIGGGVPLAALLAKAE 264 (395)
T ss_pred HHHHHHHHHHHHHc------CCEEEEeccccCCCC--CcchhhHhhcCCCCceeeeh--hhhhCCcceEEEEEccc
Confidence 99999999999 999999999986422 10000001101136777764 87766566788877653
No 298
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.15 E-value=9e-09 Score=99.79 Aligned_cols=195 Identities=16% Similarity=-0.008 Sum_probs=119.5
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.++........+ ......++.+.++++.+.+ ...++++|++||..|++.++.....+
T Consensus 52 ~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~la~~L~~~~~~~-------~~~f~~SGseA~e~Alk~ar~~~~~~--- 119 (397)
T TIGR03246 52 AHPELVKALIEQADKLWHIGNGY--TNEPVLRLAKKLVDATFAD-------KVFFCNSGAEANEAALKLARRYALDK--- 119 (397)
T ss_pred CCHHHHHHHHHHHHhcccccCcc--CCHHHHHHHHHHHhhCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc---
Confidence 35788888887776421111111 1233446666788877654 27899999999999999997653211
Q ss_pred cCCCCCCCeEEec-CCCcchHHHHHHhhCCe------------eEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCc
Q 018437 148 QGKPYDKPNIVTG-ANVQVCWEKFARYFEVE------------LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (356)
Q Consensus 148 ~g~~~~~~~vi~s-~~~h~s~~~~~~~~G~~------------v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (356)
.+ ..+.+|+.. ...|-+..-+....+.. +..+|. -|+++|++++.+++++|++...++.
T Consensus 120 ~~--~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~l~~~~aavi~Epi~~~ 191 (397)
T TIGR03246 120 HG--ADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY------NDLAAAKALISDKTCAVIVEPIQGE 191 (397)
T ss_pred CC--CCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC------CCHHHHHHHhccCeEEEEEecccCC
Confidence 01 113455554 45565544444433321 112221 2789999999888888888866666
Q ss_pred cccc----CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEE
Q 018437 215 TGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (356)
Q Consensus 215 tG~~----~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~ 290 (356)
.|.+ ..+++|.++|++| |+++++|++|.|+.. ...-.......-..|.++ .-|.+++.+.+|+++.
T Consensus 192 ~G~~~~~~~~l~~l~~lc~~~------g~llI~DEv~tG~Gr--~G~~~a~~~~gv~pDi~t--~~K~lggG~pigav~~ 261 (397)
T TIGR03246 192 GGVVPADPAFLKGLRELCDRH------NALLIFDEVQTGVGR--TGELYAYMHYGVTPDILT--SAKALGGGFPIGAMLT 261 (397)
T ss_pred CCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhcCCc--cccchhhhhcCCCCCEEE--eehhhhCCcceeEEEE
Confidence 6644 4589999999999 999999999865422 100000000011357765 4687765677888887
Q ss_pred eC
Q 018437 291 RT 292 (356)
Q Consensus 291 ~~ 292 (356)
++
T Consensus 262 ~~ 263 (397)
T TIGR03246 262 TT 263 (397)
T ss_pred cH
Confidence 54
No 299
>PLN02624 ornithine-delta-aminotransferase
Probab=99.15 E-value=8.6e-09 Score=102.03 Aligned_cols=197 Identities=12% Similarity=0.006 Sum_probs=120.5
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.+++......... .....++.+.+++++|.+. ..++++|++|+..|+..++......
T Consensus 92 ~~p~v~~ai~~ql~~~~~~~~~~~--~~~~~~la~~L~~~~~~~~-------~~f~~SGseA~e~AlklAr~~~~~~--- 159 (474)
T PLN02624 92 CHPKIIKALTEQAEKLTLSSRAFY--NDKFPEFAEYLTSMFGYDM-------VLPMNTGAEGVETAIKLARKWGYEK--- 159 (474)
T ss_pred CCHHHHHHHHHHHHhcCCcccccC--CHHHHHHHHHHHhhcCCCe-------EEEeCChHHHHHHHHHHHHHHHHhh---
Confidence 368888888887765322211111 2333456666788777643 7889999999999999887642211
Q ss_pred cCCCCCCCeEEecCCC-cchHHHHHHhhC------------CeeEEEEecCCccccCHHHHHHHHh---hCceEEEEecC
Q 018437 148 QGKPYDKPNIVTGANV-QVCWEKFARYFE------------VELKEVKLEEGYYVMNPVKAVELVD---ENTICVAAILG 211 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~-h~s~~~~~~~~G------------~~v~~v~~~~~~~~~d~~~L~~~i~---~~~~~v~~~~~ 211 (356)
+|.+..+..|+..... |-...-+....+ -++..+|. -|++.|++.++ +++.+|++..+
T Consensus 160 ~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~l~~~~~~iaaiiiEpv 233 (474)
T PLN02624 160 KGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF------GDLDALEKIFEEDGDRIAAFLFEPI 233 (474)
T ss_pred cCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC------CCHHHHHHHHHhCCCCEEEEEECCc
Confidence 1111112345544433 332222222211 01222322 16889999886 35778999999
Q ss_pred CCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCC-cCee
Q 018437 212 STLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVG 286 (356)
Q Consensus 212 ~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~g~g 286 (356)
++++|.+.| +++|.++|++| |+++++|++|.++.. ...-...+......|.++++ |.++++ +.+|
T Consensus 234 ~~~~G~v~p~~~~L~~l~~lc~~~------gillI~DEv~tG~Gr--tG~~~a~~~~~i~pDiv~ls--K~lggG~~pig 303 (474)
T PLN02624 234 QGEAGVVIPPDGYLKAVRELCSKH------NVLMIADEIQTGLAR--TGKMLACDWEEVRPDVVILG--KALGGGVIPVS 303 (474)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCcCc--CcchhhHHhcCCCCCEEEec--ccccCCCCcce
Confidence 999999876 99999999999 999999999986422 11000111111246777764 876665 5778
Q ss_pred EEEEeC
Q 018437 287 WVVWRT 292 (356)
Q Consensus 287 ~l~~~~ 292 (356)
.++.++
T Consensus 304 av~~~~ 309 (474)
T PLN02624 304 AVLADK 309 (474)
T ss_pred eeeecH
Confidence 887653
No 300
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.14 E-value=2.1e-09 Score=101.00 Aligned_cols=192 Identities=13% Similarity=-0.032 Sum_probs=123.1
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhC-CCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFN-TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g-~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (356)
+.+|.+.+++.+-.+.-+.....+.. +...++.+.+.++.+ .+ .+.++++|+|||-.|+..+|....
T Consensus 58 H~hP~iv~al~~Q~~kl~h~sn~~~~--~~~~~la~~L~~~s~~~d-------~vff~NSGaEA~EaAiKlARk~~~--- 125 (404)
T COG4992 58 HCHPALVEALKEQAEKLWHVSNLFYN--EPQAELAEKLVELSPFAD-------RVFFCNSGAEANEAALKLARKYTG--- 125 (404)
T ss_pred CCCHHHHHHHHHHHHHhhhcccccCC--hHHHHHHHHHHhhCcccc-------EEEEcCCcHHHHHHHHHHHHHHcC---
Confidence 44688888887655432222112211 223356677888886 33 389999999999999999987621
Q ss_pred HhcCCCCCCCeEEecCCC-cchHHHHHHhh-------CC-----eeEEEEecCCccccCHHHHHHHHhhCceEEEEecCC
Q 018437 146 KEQGKPYDKPNIVTGANV-QVCWEKFARYF-------EV-----ELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGS 212 (356)
Q Consensus 146 ~~~g~~~~~~~vi~s~~~-h~s~~~~~~~~-------G~-----~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~ 212 (356)
...+.+||.-..+ |--..-++... +. .++.||.+ |+++|+++|+++|.+|++---.
T Consensus 126 -----~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn------Di~al~~ai~~~taAvivEPIQ 194 (404)
T COG4992 126 -----DPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN------DIEALEAAIDEDTAAVIVEPIQ 194 (404)
T ss_pred -----CCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC------CHHHHHHHhccCeEEEEEeccc
Confidence 1123466655444 32211111111 11 24555543 7899999999999999998888
Q ss_pred Cccccc----CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEE
Q 018437 213 TLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWV 288 (356)
Q Consensus 213 ~~tG~~----~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l 288 (356)
-.-|++ +-++++.++|++| |+++|.|++|.|.... ..-......--..|.++ .-|.+++...+|.+
T Consensus 195 GEgGV~~~~~~fl~~lr~lCd~~------g~LLI~DEVQtG~GRT--Gk~fA~e~~gV~PDI~t--laK~LgGG~PigA~ 264 (404)
T COG4992 195 GEGGVIPAPPEFLKALRELCDEH------GALLILDEVQTGLGRT--GKLFAYEHYGVEPDILT--LAKALGGGFPIGAM 264 (404)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHh------CeEEEEeccccCCCcc--chHHHHHHhCCCCCEEE--eeccccCCccceee
Confidence 887877 3378899999999 9999999999875331 00000111111346666 45888888999999
Q ss_pred EEe
Q 018437 289 VWR 291 (356)
Q Consensus 289 ~~~ 291 (356)
+.+
T Consensus 265 la~ 267 (404)
T COG4992 265 LAT 267 (404)
T ss_pred EEc
Confidence 987
No 301
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.13 E-value=1.3e-09 Score=97.40 Aligned_cols=230 Identities=17% Similarity=0.149 Sum_probs=143.1
Q ss_pred HHHHHHHHHHHhhhcCCCCcccccccCCCChHHHHHHHHH----Hhc-----ccCCCcccCcchHHHHHHHHHHHHHHhC
Q 018437 39 KEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMA----SIN-----KNYVDMDEYPVTTELQNRCVNMIAHLFN 109 (356)
Q Consensus 39 ~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~i~~----~~~-----~~~~~~~~~~~~~~le~~~~~~la~l~g 109 (356)
..++++++.+-+.-.+ ..+|+++.|... |++.++..+ .+. +...+|+..++...+.+.+..++.+-+|
T Consensus 16 i~~lMdDl~d~Lrt~g--~imLggGNPa~i-Pem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~yg 92 (417)
T COG3977 16 ITQLMDDLNDGLRTPG--AIMLGGGNPARI-PEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYG 92 (417)
T ss_pred HHHHHHHHHhhccCCC--ceeeCCCCcccC-hhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhC
Confidence 4455666655543333 345666666544 444443332 221 2345677777888999999999999999
Q ss_pred CCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEec-CCCcchHHHHHHhhCCeeE---EEEecC
Q 018437 110 TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTG-ANVQVCWEKFARYFEVELK---EVKLEE 185 (356)
Q Consensus 110 ~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s-~~~h~s~~~~~~~~G~~v~---~v~~~~ 185 (356)
++-++ -.+..|+|+..+.++.+-.+..+. .++...+|+.| .|+|..|..+.-.-.+=|. .++..+
T Consensus 93 wnit~---~NIalTnGSQs~fFYlfNlF~G~~--------sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~ 161 (417)
T COG3977 93 WNITA---QNIALTNGSQSAFFYLFNLFAGRR--------SDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLP 161 (417)
T ss_pred CCCcc---ceeeecCCccchHHHHHHHhcCcc--------CCCcceeEeeccChhhccccccccCccceeeccCCccccc
Confidence 99744 457899998888877766553221 11223356665 5565544433211000011 122221
Q ss_pred -C--ccccCHHHHHHHHhhCceEEEEecCCCccccc---CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCC
Q 018437 186 -G--YYVMNPVKAVELVDENTICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL 259 (356)
Q Consensus 186 -~--~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~---~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~ 259 (356)
. .+++|.++|. +.+.+-+|+++-|+||||.+ +.+.+|..+|++| |++++.|.|||-.+-.....+.
T Consensus 162 ~g~FKY~vDF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~------giPliIDnAYg~PFP~iifsd~ 233 (417)
T COG3977 162 AGQFKYHVDFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQH------GIPLIIDNAYGVPFPGIIFSDA 233 (417)
T ss_pred ccceeeccCHHHcc--cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhc------CCcEEEecccCCCCCceecccc
Confidence 1 3788888875 44778899999999999998 4678888999999 9999999999853321111111
Q ss_pred cccccCCCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 260 EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 260 ~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
..-+. .=-..+.|..|.+.-...||+++...
T Consensus 234 ~~~w~--~NiilC~SLSK~GLPG~R~GIiIane 264 (417)
T COG3977 234 TPLWN--ENIILCMSLSKLGLPGSRCGIIIANE 264 (417)
T ss_pred cccCC--CCEEEEeehhhcCCCCcceeEEEccH
Confidence 11111 12345677889988888999998753
No 302
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.08 E-value=9.1e-09 Score=96.65 Aligned_cols=186 Identities=18% Similarity=0.150 Sum_probs=126.0
Q ss_pred ChHHHHHHHHHHhcccCC-CcccCc--chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q 018437 68 MEPECDKLVMASINKNYV-DMDEYP--VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~-~~~~~~--~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (356)
..+++.+++...++.... .+.... ...++. .+....+.+.|... +.++...+.|++..+.++..
T Consensus 39 ~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~-~~~~~~~~~~~aea-------~~ivnnn~aAVll~~~al~~----- 105 (395)
T COG1921 39 YSPEAIEAMKEAMRAPVELETDLKTGKRGARLT-ELAELLCGLTGAEA-------AAIVNNNAAAVLLTLNALAE----- 105 (395)
T ss_pred CCHHHHHHHHHHhcccceeeeecccchhhHHHH-HHHHHHhcccchhh-------eeeECCcHHHHHHHHhhhcc-----
Confidence 346777777766654211 221111 111221 33334444444433 77888877777776665543
Q ss_pred HHhcCCCCCCCeEEecC-----CCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCccccc-
Q 018437 145 RKEQGKPYDKPNIVTGA-----NVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEF- 218 (356)
Q Consensus 145 ~~~~g~~~~~~~vi~s~-----~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~- 218 (356)
+.+++++- ..|+++...++..|++++.|... .+....+++.+|.+++.++.-++.+|. |..
T Consensus 106 ---------~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~t---n~t~~~d~~~AIne~ta~llkV~s~~~-~f~~ 172 (395)
T COG1921 106 ---------GKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGTT---NRTHLKDYELAINENTALLLKVHSSNY-GFTG 172 (395)
T ss_pred ---------CCeEEEEccccccCCCCChhHHHHHcCCEEEEeccc---CcCCHHHHHHHhccCCeeEEEEeeccc-cccc
Confidence 23444332 57899999999999998777643 567889999999999998877777765 433
Q ss_pred -CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc---CCCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 219 -EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR---LPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 219 -~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~---~~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
-+++++.++||++ ++++++|.+.|..+- . ..+++ ..|+|.+++|++|.+++|. +|+++-|+
T Consensus 173 ~l~~~~l~~ia~~~------~lpvivD~aSg~~v~----~--e~~l~~~la~GaDLV~~SgdKllgGPq-aGii~GkK 237 (395)
T COG1921 173 MLSEEELVEIAHEK------GLPVIVDLASGALVD----K--EPDLREALALGADLVSFSGDKLLGGPQ-AGIIVGKK 237 (395)
T ss_pred cccHHHHHHHHHHc------CCCEEEecCCccccc----c--ccchhHHHhcCCCEEEEecchhcCCCc-cceEechH
Confidence 3788899999999 999999999886432 1 12222 4589999999999999988 68887553
No 303
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.08 E-value=3.7e-09 Score=98.93 Aligned_cols=229 Identities=14% Similarity=0.022 Sum_probs=148.6
Q ss_pred CcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcc
Q 018437 86 DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV 165 (356)
Q Consensus 86 ~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~ 165 (356)
+|....|..++...+.......++.+... ....++|+|.|.++..+++.++++ ++.|++-..++.
T Consensus 95 QYg~s~G~peLl~fik~h~~~~ih~p~~~--~wdiiit~G~t~~l~~~l~~~~N~-------------gd~vlie~~ty~ 159 (472)
T KOG0634|consen 95 QYGQSSGIPELLLFIKDHNRPTIHAPPYK--NWDIIITNGNTDGLFKVLRTLINR-------------GDHVLIEEYTYP 159 (472)
T ss_pred ccccccCcHHHHHHHHHhccccccCCCCC--CceEEEecCCchHHHHHHHHhhcC-------------CCceEEecccch
Confidence 45556677778777766555556666522 245799999999999999999886 689999999999
Q ss_pred hHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh---------CceEE-EEecCCCcccccCCH---HHHHHHHHHhh
Q 018437 166 CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---------NTICV-AAILGSTLTGEFEDV---KLLHDLLTKKN 232 (356)
Q Consensus 166 s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---------~~~~v-~~~~~~~~tG~~~~i---~~I~~i~~~~~ 232 (356)
+-...++.+|+.++.|+.|+ .-+++|.|++.+.. ++.++ .+-.++||||..-.+ ++|.++|++|
T Consensus 160 ~AL~s~~a~gv~~ipv~md~--~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKy- 236 (472)
T KOG0634|consen 160 SALQSMEALGVKIIPVKMDQ--DGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKY- 236 (472)
T ss_pred HHHHhccccCceEEeccccC--CCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHc-
Confidence 98888999997777777765 47999999999863 24443 366788999998665 5799999999
Q ss_pred hccCCCCcEEEecccccccccccCC-----CCccc-----------ccCCCce--EEEE-cCCcCCCCCcCeeEEEEeCC
Q 018437 233 EETGWDTPIHVDAASGGFIAPFLYP-----DLEWD-----------FRLPLVK--SINV-SGHKYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 233 ~~~~~~~~l~vD~a~~~~~~~~~~~-----~~~~~-----------~~~~~~D--s~~~-~~hK~l~~P~g~g~l~~~~~ 293 (356)
+++++.|..|...-++-..+ ++.++ +.-...| .+.. ++.|-+.-....|++-..+
T Consensus 237 -----DfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~- 310 (472)
T KOG0634|consen 237 -----DFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNS- 310 (472)
T ss_pred -----CEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCH-
Confidence 99999999987543321111 11111 0000011 1111 2456654334566665432
Q ss_pred CCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHH
Q 018437 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSL 348 (356)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~ 348 (356)
..+.+. +.... .+..+ +++..-.-+++.|+..|++|+.+.+.+.+
T Consensus 311 ~~l~ri-------l~~ae--~~t~~-pSg~sq~iv~a~l~~wgqeG~~~wi~~l~ 355 (472)
T KOG0634|consen 311 LFLKRI-------LDLAE--VATSG-PSGFSQGIVYAMLKRWGQEGFLRWIQHLR 355 (472)
T ss_pred HHHHHH-------hhhcc--eeecC-cccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122111 11110 11111 33334556788999999999988887754
No 304
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.07 E-value=4.3e-08 Score=95.23 Aligned_cols=193 Identities=14% Similarity=-0.014 Sum_probs=116.6
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.+.+....... .......++.+.++++.+.+. ..++++|++||..|+..++..... +
T Consensus 57 ~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~~~~~-------~~~~~sGseA~e~a~klar~~~~~-~-- 124 (403)
T PRK05093 57 CHPALVKALKEQGEKLWHISNV--FTNEPALRLAKKLIDATFAER-------VFFANSGAEANEAAFKLARRYACD-R-- 124 (403)
T ss_pred CCHHHHHHHHHHHHhcCcccCc--cCCHHHHHHHHHHHhhCCCCE-------EEEeCchHHHHHHHHHHHHHHHhh-c--
Confidence 4578888888777542211111 112223466667777765542 789999999999999988765321 0
Q ss_pred cCCCCCCCeEE-ecCCCcchHHHHHHhhC-------C-----eeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCc
Q 018437 148 QGKPYDKPNIV-TGANVQVCWEKFARYFE-------V-----ELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (356)
Q Consensus 148 ~g~~~~~~~vi-~s~~~h~s~~~~~~~~G-------~-----~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (356)
+ ...+..|+ +....|-+...+....| . +++.+|. -|++.+++.+.+++++|++. |.++
T Consensus 125 -~-~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~l~~~~aaiiie-p~~~ 195 (403)
T PRK05093 125 -H-GPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF------NDLAAVKAVIDDHTCAVVVE-PIQG 195 (403)
T ss_pred -C-CCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC------CCHHHHHHHhcCCeEEEEEe-cccC
Confidence 0 01133455 44455655443333211 1 1222221 17899999998888888777 6677
Q ss_pred cccc-----CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCC-cccccCCCceEEEEcCCcCCCCCcCeeEE
Q 018437 215 TGEF-----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWDFRLPLVKSINVSGHKYGLVYAGVGWV 288 (356)
Q Consensus 215 tG~~-----~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l 288 (356)
+|.+ +.+++|.++|++| ++++++|++|.++.. .... .........|..+ ..|.+++.+.+|++
T Consensus 196 ~gg~~~~~~~~l~~l~~l~~~~------g~~lI~DEv~~g~g~---~g~~~~~~~~~~~pdi~s--~sK~l~~G~rig~v 264 (403)
T PRK05093 196 EGGVIPATPEFLQGLRELCDQH------NALLIFDEVQTGMGR---TGDLFAYMHYGVTPDILT--SAKALGGGFPIGAM 264 (403)
T ss_pred CCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCC---CccchhhhhcCCCCCEEE--ecccccCCcceEEE
Confidence 6654 2389999999999 999999999986422 1111 0111111245444 46887766779999
Q ss_pred EEeC
Q 018437 289 VWRT 292 (356)
Q Consensus 289 ~~~~ 292 (356)
+.++
T Consensus 265 v~~~ 268 (403)
T PRK05093 265 LTTA 268 (403)
T ss_pred EEcH
Confidence 8754
No 305
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.04 E-value=3.1e-08 Score=94.62 Aligned_cols=227 Identities=15% Similarity=-0.020 Sum_probs=133.7
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.+.+-......+. .+...++.+.++++.|.+. ..++++||+|+..|++.++...
T Consensus 41 ~~p~v~~ai~~ql~~~~~~~~~~~--~~~~~~la~~l~~~~~~~~-------v~~~~SGseA~e~Alklar~~~------ 105 (364)
T PRK04013 41 NHPEWVEEMSEQLEKLVVAGPMFE--HEEKEEMLEELSKWVNYEY-------VYMGNSGTEAVEAALKFARLYT------ 105 (364)
T ss_pred CCHHHHHHHHHHHHhcCCccCCcC--CHHHHHHHHHHHhhcCCCE-------EEEeCchHHHHHHHHHHHHHHh------
Confidence 447777888777664221111111 1223345566777776543 7899999999999999987641
Q ss_pred cCCCCCCCeEEecCCCcch-HHHHHHhh-------CCe-----eEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCc
Q 018437 148 QGKPYDKPNIVTGANVQVC-WEKFARYF-------EVE-----LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s-~~~~~~~~-------G~~-----v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (356)
| +++|+....+|+. ..-+.... +.. +..+|. -|++.+++.+.+++++|++......
T Consensus 106 -g----r~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~------~d~~~l~~~i~~~~aAvivEpi~g~ 174 (364)
T PRK04013 106 -G----RKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF------NDVEAAKEAITKETAAVIFEPIQGE 174 (364)
T ss_pred -C----CCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC------CCHHHHHHHhcCCcEEEEEcCCcCC
Confidence 1 3567766555443 22222211 122 222221 1678899999888888887776665
Q ss_pred cccc-CC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEE
Q 018437 215 TGEF-ED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (356)
Q Consensus 215 tG~~-~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~ 290 (356)
-|.+ -| +++|.++|++| |++++.|+++.|+ . ...-......--..|.+++ -|.+++...+|.++.
T Consensus 175 gG~~~~~~~yl~~lr~lc~~~------gillI~DEv~tG~-R--tG~~~a~~~~gv~PDiv~~--gK~lggG~P~~a~~~ 243 (364)
T PRK04013 175 GGIVPAKEEFVKTLRDLTEDV------GALLIADEVQSGL-R--TGKFLAIEHYKVEPDIVTM--GKGIGNGVPVSLTLT 243 (364)
T ss_pred CCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhcC-C--CCchhHHHhcCCCCCEEEe--cccccCCceeEEEEe
Confidence 5554 34 89999999999 9999999998864 2 1110011111123677775 587666567787776
Q ss_pred eCCCCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHH
Q 018437 291 RTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFIS 346 (356)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~ 346 (356)
+.+ . . . .. + ..|..| +....++..++|+.+-++++.+..++
T Consensus 244 ~~~-~-~-~-----~~--~---~~T~~g--np~~~aaa~a~l~~i~~~~l~~~~~~ 284 (364)
T PRK04013 244 NFD-V-E-R-----GK--H---GSTFGG--NPLACKAVAVTLRILRRERLVEKAGE 284 (364)
T ss_pred ccc-c-c-C-----CC--c---CCCCCc--CHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 543 1 1 0 00 1 112112 22335666688888877776555544
No 306
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.04 E-value=4.8e-08 Score=93.95 Aligned_cols=189 Identities=15% Similarity=0.013 Sum_probs=117.8
Q ss_pred hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhc
Q 018437 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (356)
.|.+.+++.+.+......+.. ....++.+ +++.++... .....++++|++||..|+..++...
T Consensus 46 ~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~----la~~l~~~~----~~~~~~~~SGseA~~~Al~~ar~~~------- 108 (375)
T PRK04260 46 HPQVQQALQKQAGLIWHSPNL--YLNSLQEE----VAQKLIGDK----DYLAFFCNSGAEANEAAIKIARKAT------- 108 (375)
T ss_pred CHHHHHHHHHHHHhcCcccCc--cCCHHHHH----HHHHHhcCc----CCEEEEcCccHHHHHHHHHHHHHhc-------
Confidence 577888888877653332221 22334444 454432222 1235789999999999999886531
Q ss_pred CCCCCCCeEEec-CCCcchHHHHHHhhCCee---------EEEEecCCccccCHHHHHHHHhhCceEEEEecCCCccccc
Q 018437 149 GKPYDKPNIVTG-ANVQVCWEKFARYFEVEL---------KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEF 218 (356)
Q Consensus 149 g~~~~~~~vi~s-~~~h~s~~~~~~~~G~~v---------~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~ 218 (356)
++.+|++. ...|-+...++...|.+. ..++... ..|+++|++.+.+++.+|++..+++++|.+
T Consensus 109 ----~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~dl~~l~~~l~~~~a~vi~e~v~~~~G~~ 181 (375)
T PRK04260 109 ----GKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAI---FNDLNSVKALVNKNTAAVMLELVQGESGVL 181 (375)
T ss_pred ----CCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeC---CCCHHHHHHhcCCCeEEEEECCeECCCCCc
Confidence 13456665 455665545544333221 1111110 238999999988788899999999999988
Q ss_pred CC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCC-cccccCCCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 219 ED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 219 ~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
.+ +++|.++|+++ ++++++|++|.++.. .... .....-...|.+ +..|.+......|+++.++
T Consensus 182 ~~~~~~l~~~~~l~~~~------~~~~i~De~~~g~g~---~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~ 249 (375)
T PRK04260 182 PADKDFVKALADYCQET------GILLIVDEVQTGMGR---TGKLYAFEHYGIEPDIF--TLAKGLANGVPVGAMLAKS 249 (375)
T ss_pred CCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc---ccchhhhHhhCCCCCEE--EecccccCCcceEEEEEcH
Confidence 54 89999999999 999999999976422 1111 111111124544 4679876445689998864
No 307
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.03 E-value=4.2e-08 Score=95.45 Aligned_cols=198 Identities=14% Similarity=-0.042 Sum_probs=117.2
Q ss_pred hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhc
Q 018437 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (356)
+|.+.+++.+.+.........+ ......++.+.++++++.+ ...++++|+||+..|++.++..... +
T Consensus 57 ~p~v~~A~~~~~~~~~~~~~~~--~~~~~~~la~~l~~~~~~~-------~v~~~~sGseA~e~Alk~ar~~~~~-~--- 123 (406)
T PRK12381 57 HPALREALNEQASKFWHTGNGY--TNEPVLRLAKKLIDATFAD-------RVFFCNSGAEANEAALKLARKYAHD-R--- 123 (406)
T ss_pred CHHHHHHHHHHHhhcccccCcc--CCHHHHHHHHHHHhhCCCC-------eEEEcCCcHHHHHHHHHHHHHHHhh-c---
Confidence 5788888887775421111111 1223345666788877654 3799999999999999998765321 0
Q ss_pred CCCCCCCeEEecCCC-cchHHHHHHhhCCeeE---EEEecCC---ccccCHHHHHHHHhhCceEEEEecCCCccccc---
Q 018437 149 GKPYDKPNIVTGANV-QVCWEKFARYFEVELK---EVKLEEG---YYVMNPVKAVELVDENTICVAAILGSTLTGEF--- 218 (356)
Q Consensus 149 g~~~~~~~vi~s~~~-h~s~~~~~~~~G~~v~---~v~~~~~---~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~--- 218 (356)
+. ..+.+|+..+.. |-...-+....|.... +.|+.++ -...|+++|++.+++++.+|++ -|.+++|.+
T Consensus 124 ~~-~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavii-EPv~~~gg~~~~ 201 (406)
T PRK12381 124 YG-SHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTCAVIV-EPIQGEGGVIPA 201 (406)
T ss_pred CC-CCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCeeEEEE-eCCcCCCCCcCC
Confidence 10 113456655444 4443333333231100 0111000 0123789999999877777776 477887753
Q ss_pred --CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCC-cccccCCCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 219 --EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 219 --~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
+.+++|.++|++| ++++++|++|.++.. .... .....-...|.++ .-|.+++.+.+|+++.++
T Consensus 202 ~~~~l~~l~~l~~~~------~~llI~DEv~tG~gr---~G~~~~~~~~~v~pDi~t--~sK~l~gG~~ig~~~~~~ 267 (406)
T PRK12381 202 DKAFLQGLRELCDRH------NALLIFDEVQTGVGR---TGELYAYMHYGVTPDVLT--TAKALGGGFPIGAMLTTE 267 (406)
T ss_pred CHHHHHHHHHHHHHc------CCEEEEcchhhCCCC---CcchhhhHhhCCCCCEEE--ehhhhhCCCceEEEEEcH
Confidence 5689999999999 999999999976432 1111 0011111346554 569886667788888754
No 308
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.02 E-value=2.1e-08 Score=98.06 Aligned_cols=192 Identities=13% Similarity=-0.044 Sum_probs=116.0
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++.........+.. .++++.+++.+... ..+.+++||+||+..|++.++...
T Consensus 64 h~~p~v~~ai~~q~~~~~~~~~~~~~~----~~lae~l~~~~~~~------~~v~~~~sGseA~e~Alk~ar~~~----- 128 (423)
T TIGR00713 64 HAHPRVVEAVKEALERGTSYGAPTEAE----ILLAKEIISRVPSV------EMVRFVNSGTEATMSAVRLARGYT----- 128 (423)
T ss_pred CCCHHHHHHHHHHHHhCCcCCCCCHHH----HHHHHHHHHhCCcc------cEEEEeCCHHHHHHHHHHHHHHhh-----
Confidence 456888888888776533222122233 35556677766432 137899999999999999987641
Q ss_pred hcCCCCCCCeEEecCCCcchHHHHHHh-h--CCeeEEEEecC--------Cccc---cCHHHHHHHHh---hCceEEEEe
Q 018437 147 EQGKPYDKPNIVTGANVQVCWEKFARY-F--EVELKEVKLEE--------GYYV---MNPVKAVELVD---ENTICVAAI 209 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~h~s~~~~~~~-~--G~~v~~v~~~~--------~~~~---~d~~~L~~~i~---~~~~~v~~~ 209 (356)
| +++|+...++|..+...+.. . |......+..+ +... -|+++|+++++ +++++|++.
T Consensus 129 --g----r~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~e 202 (423)
T TIGR00713 129 --G----RDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVE 202 (423)
T ss_pred --C----CCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEe
Confidence 1 46788777765553222111 1 11100001000 0001 17899999997 456777775
Q ss_pred -cCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccc-ccCCCceEEEEcCCcCCCCCc
Q 018437 210 -LGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINVSGHKYGLVYA 283 (356)
Q Consensus 210 -~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~Ds~~~~~hK~l~~P~ 283 (356)
.++| +|.+.+ +++|.++|++| ++++++|++|.++... ...... +.+ ..|.+ ..-|.+.+.+
T Consensus 203 p~~~~-~G~~~~~~~~l~~l~~l~~~~------~~llI~DEv~~g~r~g---~~~~~~~~~~-~pDi~--t~sK~l~~G~ 269 (423)
T TIGR00713 203 PVAGN-MGVVPPKPEFLAGLRALTEEY------GSLLIFDEVMTGFRVA---LGGAQEYFGV-EPDLT--TLGKIIGGGL 269 (423)
T ss_pred CCCCC-CCCcCCCHHHHHHHHHHHHHh------CCEEEEEccccccccC---cchhHHHhCC-Ccchh--hhhhhhcCCC
Confidence 5555 688755 78999999999 9999999999775321 000011 111 23543 4678876556
Q ss_pred CeeEEEEeC
Q 018437 284 GVGWVVWRT 292 (356)
Q Consensus 284 g~g~l~~~~ 292 (356)
..|+++.++
T Consensus 270 pig~v~~~~ 278 (423)
T TIGR00713 270 PVGAFGGRR 278 (423)
T ss_pred ceeeeeEHH
Confidence 688888754
No 309
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.93 E-value=1.1e-09 Score=101.99 Aligned_cols=162 Identities=17% Similarity=0.199 Sum_probs=39.3
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCc------chHHHHHH
Q 018437 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ------VCWEKFAR 172 (356)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h------~s~~~~~~ 172 (356)
.+.+.++.++|++. ..++++...|+++++.++.. +.+||+|.-.- +.+...++
T Consensus 51 ~v~~ll~~ltgAea-------A~VvNnnaAAv~L~l~~la~--------------~~EvIvsRGelVeiGgsFRip~vm~ 109 (367)
T PF03841_consen 51 HVEELLCELTGAEA-------ALVVNNNAAAVLLALNTLAK--------------GKEVIVSRGELVEIGGSFRIPDVMR 109 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccc-------cccccccccccccccccccc--------------ccccccccccccccccccccccccc
Confidence 45566889999975 56777767777777666543 24677665432 23556667
Q ss_pred hhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcc-----cccCCHHHHHHHHHHhhhccCCCCcEEEeccc
Q 018437 173 YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT-----GEFEDVKLLHDLLTKKNEETGWDTPIHVDAAS 247 (356)
Q Consensus 173 ~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t-----G~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~ 247 (356)
.-|+.++.|-.. .+..+++.+++|+++|.++.-.+++|.. +. -+++++.+++++| ++++++|.+.
T Consensus 110 ~sGa~lvEVGtt---N~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~-~~~~el~~la~~~------~lp~i~Dlgs 179 (367)
T PF03841_consen 110 QSGARLVEVGTT---NRTHLSDYEKAITENTAALLKVHTSNFRIQGFTGE-VSLEELAELAKEH------GLPVIVDLGS 179 (367)
T ss_dssp -------------------------------------------------------HHHHHHHHH------T--EEEE-TT
T ss_pred cccccccccccc---ccccccccccccccccccccccccccccccccccc-ccHHHHHHHHhhc------CCcEEEECCC
Confidence 778888777764 3667888999999999999989988883 33 3799999999999 9999999988
Q ss_pred ccccc--cc-cCCCCc-ccccCCCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 248 GGFIA--PF-LYPDLE-WDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 248 ~~~~~--~~-~~~~~~-~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
|...- ++ +.+++. ...-..|+|.+++|+.|.+++|. +|+++-|+
T Consensus 180 G~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ-aGiI~Gkk 227 (367)
T PF03841_consen 180 GLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ-AGIIVGKK 227 (367)
T ss_dssp HHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S--EEEEEEH
T ss_pred CCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCC-eEEEEeCH
Confidence 65431 01 111111 11224689999999999999887 69998764
No 310
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.92 E-value=6.1e-08 Score=89.65 Aligned_cols=169 Identities=20% Similarity=0.151 Sum_probs=102.4
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-ecCCCcchHHHH
Q 018437 92 VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIV-TGANVQVCWEKF 170 (356)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi-~s~~~h~s~~~~ 170 (356)
+...+|+- +|+.||.+.. -...-+ .+||.|+..++.+..++ +++++ ++..-|-..++.
T Consensus 55 GRd~le~i----yA~vfgaE~A---LVRpq~-vSGTHAi~~~Lfg~Lrp-------------GD~ll~~tG~PYDTL~~V 113 (403)
T PF06838_consen 55 GRDKLERI----YADVFGAEDA---LVRPQF-VSGTHAIALALFGVLRP-------------GDELLSITGKPYDTLEEV 113 (403)
T ss_dssp HHHHHHHH----HHHHCT-SEE---EEETTS--SHHHHHHHHHHHH--T-------------T-EEEESSSS--CCHHHH
T ss_pred cHHHHHHH----HHHHhCchhh---hhcccc-cchHHHHHHHHHhcCCC-------------CCeEEEcCCCchhhHHHH
Confidence 55555544 8999999851 011112 26799999999998775 46655 344334445544
Q ss_pred HH----------hhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCC----CcccccCCHHHHHHHHHHhhhccC
Q 018437 171 AR----------YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGS----TLTGEFEDVKLLHDLLTKKNEETG 236 (356)
Q Consensus 171 ~~----------~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~----~~tG~~~~i~~I~~i~~~~~~~~~ 236 (356)
.. -.|+....||+.++ +.+|.+.+++++++++++|.+.-.. -++=++++|+++.+++|+.+.
T Consensus 114 IG~~g~~~GSL~e~Gi~Y~~v~L~~d-g~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p--- 189 (403)
T PF06838_consen 114 IGIRGNGPGSLKEFGIKYREVPLTED-GTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINP--- 189 (403)
T ss_dssp HTSSSSSSSSTGGGT-EEEE--B-TT-SSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-T---
T ss_pred hCCCCCCCCChHHhCceeEEEeecCC-CCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCC---
Confidence 42 34677889999875 8999999999999999999876443 333345778888888888754
Q ss_pred CCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCC---CcCeeEEEEeCCCC
Q 018437 237 WDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLV---YAGVGWVVWRTKDD 295 (356)
Q Consensus 237 ~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~---P~g~g~l~~~~~~~ 295 (356)
++++.||.|||.|+- ...+.++ |+|.+.-|.=|..++ |.| |.+. -++++
T Consensus 190 -~~iifVDNCYGEFvE----~~EP~~v---GADl~aGSLIKNpGGgiAptG-GYIa-Gr~~l 241 (403)
T PF06838_consen 190 -DVIIFVDNCYGEFVE----TQEPTEV---GADLMAGSLIKNPGGGIAPTG-GYIA-GRKDL 241 (403)
T ss_dssp -TSEEEEE-TTTTTTS----SS-GGGG---T-SEEEEETTSGGGTTT-SS--EEEE-ESHHH
T ss_pred -CeEEEEeCCcceecc----ccCcccc---chhheeccceeCCCCCccCcC-CEEe-chHHH
Confidence 899999999998755 2223332 899999999998443 333 5554 44433
No 311
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.90 E-value=7e-08 Score=94.44 Aligned_cols=189 Identities=15% Similarity=0.015 Sum_probs=114.6
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++.....+. ....+.++.+++++++.. . ....++++|++|+..|+..++...
T Consensus 66 h~~p~i~~a~~~~~~~~~~~~~----~~~~~~~la~~L~~~~~~-~-----~~v~~~~sGseA~e~Aik~a~~~~----- 130 (426)
T PRK00062 66 HAHPEVVEAVIEAAEKGLSFGA----PTELEVELAELVIELVPS-I-----EMVRMVNSGTEATMSAIRLARGYT----- 130 (426)
T ss_pred CCCHHHHHHHHHHHHhCCcCCC----CCHHHHHHHHHHHHhCCC-C-----CEEEEecCHHHHHHHHHHHHHHHh-----
Confidence 3457888888877765322111 123444677777777531 1 137899999999999999987641
Q ss_pred hcCCCCCCCeEEecCCCcchHHHHHHhh--------C-----CeeEE-----EEecCCccccCHHHHHHHHhh---CceE
Q 018437 147 EQGKPYDKPNIVTGANVQVCWEKFARYF--------E-----VELKE-----VKLEEGYYVMNPVKAVELVDE---NTIC 205 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~h~s~~~~~~~~--------G-----~~v~~-----v~~~~~~~~~d~~~L~~~i~~---~~~~ 205 (356)
| +.+||....+|+.+...+... + ...+. +.+. .-|+++|++.+.+ ++.+
T Consensus 131 --g----~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~l~~~i~~~~~~~aa 200 (426)
T PRK00062 131 --G----RDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAP----YNDLEAVEELFEEYGDEIAA 200 (426)
T ss_pred --C----CCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcC----CCCHHHHHHHHHhCCCcEEE
Confidence 1 356777666655543222111 1 00111 1111 1278899988863 5667
Q ss_pred EEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccc-ccCCCceEEEEcCCcCCC
Q 018437 206 VAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINVSGHKYGL 280 (356)
Q Consensus 206 v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~Ds~~~~~hK~l~ 280 (356)
|++.......|.+-+ +++|.++|++| ++++++|++|.++-. ......+ +.+ ..|.+ ...|.++
T Consensus 201 iivEpv~~~~G~~~~~~~~l~~l~~l~~~~------~~llI~DEv~~G~r~---g~~~~~~~~~~-~pDi~--~~gK~l~ 268 (426)
T PRK00062 201 VIVEPVAGNMGVVPPKPGFLEGLRELCDEH------GALLIFDEVMTGFRV---ALGGAQGYYGV-TPDLT--TLGKIIG 268 (426)
T ss_pred EEEeCCcCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeechhcccc---CCccHHHHhCC-CcchH--hhhhHhh
Confidence 777756666788877 99999999999 999999999986522 1100011 111 23433 4568876
Q ss_pred CCcCeeEEEEeC
Q 018437 281 VYAGVGWVVWRT 292 (356)
Q Consensus 281 ~P~g~g~l~~~~ 292 (356)
+.+..|+++.++
T Consensus 269 ~G~p~ga~~~~~ 280 (426)
T PRK00062 269 GGLPVGAFGGRR 280 (426)
T ss_pred CCCcceeeeEHH
Confidence 656677776643
No 312
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=98.88 E-value=3.8e-07 Score=89.08 Aligned_cols=198 Identities=12% Similarity=-0.044 Sum_probs=118.1
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++.... ........+.+.++.+.+.++..... .....++++||||+..|++.++..
T Consensus 56 h~~p~v~~ai~~ql~~~~~-~~~~~~~~~~~~~la~~l~~~~p~~~----~~~~~f~~sGseA~e~AlklAr~~------ 124 (421)
T PRK09792 56 HRHPDLVAAVEQQLQQFTH-TAYQIVPYESYVTLAEKINALAPVSG----QAKTAFFTTGAEAVENAVKIARAH------ 124 (421)
T ss_pred CCCHHHHHHHHHHHHhccC-cccCccCCHHHHHHHHHHHHhCCCCC----CceEEEeCChHHHHHHHHHHHHHh------
Confidence 3457888888877764221 11111122334466666777754221 124788999999999999999753
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHHhhCC-------------eeEEEEecCCcccc----CHHHHHHHHh-----hCc
Q 018437 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEV-------------ELKEVKLEEGYYVM----NPVKAVELVD-----ENT 203 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~-~h~s~~~~~~~~G~-------------~v~~v~~~~~~~~~----d~~~L~~~i~-----~~~ 203 (356)
.| +++|+.-.. .|-...-+....|. .+..+|...+...+ +++.+++.++ ++.
T Consensus 125 -tg----r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~i 199 (421)
T PRK09792 125 -TG----RPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQV 199 (421)
T ss_pred -cC----CCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCce
Confidence 11 345665444 44332222222111 24445553211112 3478888875 346
Q ss_pred eEEEEecCCCcccccC-C---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc--CCCceEEEEcCCc
Q 018437 204 ICVAAILGSTLTGEFE-D---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPLVKSINVSGHK 277 (356)
Q Consensus 204 ~~v~~~~~~~~tG~~~-~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~Ds~~~~~hK 277 (356)
++|++.-..+++|... | +++|.++|++| ++++++|+++.++.. . .. .+.+. -...|.++ .-|
T Consensus 200 aavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEv~tg~gr--~-G~-~~a~~~~~~~pDi~t--~gK 267 (421)
T PRK09792 200 AAIIFEPVQGEGGFNVAPKELVAAIRRLCDEH------GIVMIADEVQSGFAR--T-GK-LFAMDHYADKPDLMT--MAK 267 (421)
T ss_pred EEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCC--C-Cc-hhHHHhcCCCCcEEE--eeh
Confidence 7788887788888653 5 89999999999 999999999987532 1 11 11111 12356544 569
Q ss_pred CCCCCcCeeEEEEeC
Q 018437 278 YGLVYAGVGWVVWRT 292 (356)
Q Consensus 278 ~l~~P~g~g~l~~~~ 292 (356)
.+.+.+..|+++.++
T Consensus 268 ~l~~G~pigav~~~~ 282 (421)
T PRK09792 268 SLAGGMPLSGVVGNA 282 (421)
T ss_pred hhcCCCceEEEEEcH
Confidence 887767889988754
No 313
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=98.86 E-value=4.4e-07 Score=90.33 Aligned_cols=205 Identities=14% Similarity=0.005 Sum_probs=114.8
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++.............+.+.++.+.+.+++.-.. .....++++|+||+..|+..++.....
T Consensus 105 h~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~----~~~v~f~~SGsEA~e~AlKlAr~~~~~--- 177 (504)
T PLN02760 105 GSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARK----MGKVFFTNSGSEANDTQVKLVWYYNNA--- 177 (504)
T ss_pred CCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCCC----CCEEEEeCChHHHHHHHHHHHHHHHHh---
Confidence 3458888888888765322211111223444566666777643211 123688999999999999999865321
Q ss_pred hcCCCCCCCeEE-ecCCCcchHHHHHHhhCCe------------eEEEEecCCccc-------------cCHHHHHHHHh
Q 018437 147 EQGKPYDKPNIV-TGANVQVCWEKFARYFEVE------------LKEVKLEEGYYV-------------MNPVKAVELVD 200 (356)
Q Consensus 147 ~~g~~~~~~~vi-~s~~~h~s~~~~~~~~G~~------------v~~v~~~~~~~~-------------~d~~~L~~~i~ 200 (356)
.|... +.+|| .....|-+..-++...|.. +..++.+. .++ ...++|++.+.
T Consensus 178 -~g~~~-r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~le~~l~ 254 (504)
T PLN02760 178 -LGRPN-KKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPH-YWRFHLPGETEEEFSTRLADNLENLIL 254 (504)
T ss_pred -cCCCC-CcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCc-ccccCCCCCcHHHHHHHHHHHHHHHHH
Confidence 12111 34454 4455666654444433321 22333211 011 11245777664
Q ss_pred ----hCceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccc-cccCCCCcccccCCCceEE
Q 018437 201 ----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-PFLYPDLEWDFRLPLVKSI 271 (356)
Q Consensus 201 ----~~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~-~~~~~~~~~~~~~~~~Ds~ 271 (356)
+++.+|++--....-|.+.| +++|.++|++| |+++|+|+++.|+.. .-......+.+ ..|.+
T Consensus 255 ~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~------g~lLI~DEV~TGfGRtG~~~a~e~~gv---~PDiv 325 (504)
T PLN02760 255 KEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKY------DILFIADEVICAFGRLGTMFGCDKYNI---KPDLV 325 (504)
T ss_pred hcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEecchhhCCcccchhhHHHhcCC---CCcEE
Confidence 23556666555555577777 99999999999 999999999965422 10000001111 36766
Q ss_pred EEcCCcCCCCCc-CeeEEEEeC
Q 018437 272 NVSGHKYGLVYA-GVGWVVWRT 292 (356)
Q Consensus 272 ~~~~hK~l~~P~-g~g~l~~~~ 292 (356)
++ -|.+++.+ .+|.++.++
T Consensus 326 tl--gK~lggG~~PigAv~~~~ 345 (504)
T PLN02760 326 SL--AKALSSAYMPIGAVLVSP 345 (504)
T ss_pred Ee--cccccCCccccceEeecH
Confidence 64 58776543 456677664
No 314
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.86 E-value=6.3e-07 Score=87.68 Aligned_cols=204 Identities=10% Similarity=-0.036 Sum_probs=116.1
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++........ ....+.+.++.+.+.+++.-.. ....++++|+||+..|++.+|..+..+
T Consensus 58 h~~p~v~~ai~~q~~~~~~~~~~-~~~~~~~~~la~~l~~~~p~~~-----~~v~f~~sGseA~e~A~klar~~~~~~-- 129 (423)
T PRK05964 58 HNHPYIDQAIREQLDRLDHVIFA-GFTHEPAERLAQRLVALTPGGL-----DHVFFSDSGSVAVEVALKMALQYWRNR-- 129 (423)
T ss_pred CCCHHHHHHHHHHHhhCCCcccc-ccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCcHHHHHHHHHHHHHHHHhc--
Confidence 34578888888777642211110 0112344467777888763211 247899999999999999998753221
Q ss_pred hcCCCCCCCeEEecCCC-cchHHHHHHhhC------------CeeEEEEecCCc-cccCHHHHHHHHhh---CceEEEEe
Q 018437 147 EQGKPYDKPNIVTGANV-QVCWEKFARYFE------------VELKEVKLEEGY-YVMNPVKAVELVDE---NTICVAAI 209 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~-h~s~~~~~~~~G------------~~v~~v~~~~~~-~~~d~~~L~~~i~~---~~~~v~~~ 209 (356)
|. ..+.+|+.-..+ |-...-+....+ ..+..++...++ ...++++|++.+.+ +..+|++.
T Consensus 130 --~~-~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~iaavi~E 206 (423)
T PRK05964 130 --GE-PGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHAGEIAAFIVE 206 (423)
T ss_pred --CC-CCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCCcEEEEEEe
Confidence 11 113456654444 432222222111 123445543211 12237888888853 44455554
Q ss_pred c-CCCcccccC----CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCC-cccccCCCceEEEEcCCcCCCCC-
Q 018437 210 L-GSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWDFRLPLVKSINVSGHKYGLVY- 282 (356)
Q Consensus 210 ~-~~~~tG~~~----~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~Ds~~~~~hK~l~~P- 282 (356)
- .....|..- .+++|.++|++| |+++++|+++.++... ... ..+..--..|.++++ |++.++
T Consensus 207 p~i~~~gG~~~~~~~~l~~l~~lc~~~------g~llI~DEv~tg~gr~---G~~~a~~~~~v~pDi~~~~--K~l~gG~ 275 (423)
T PRK05964 207 PLVQGAGGMLFYDPRYLAELRRICDRH------GVLLIFDEIATGFGRT---GTLFACEQAGVSPDIMCLS--KGLTGGY 275 (423)
T ss_pred cccccCCCcccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCcC---cchhHHHhcCCCCCeeeee--hhhhcCc
Confidence 3 255556553 489999999999 9999999999764321 100 011111145766654 998776
Q ss_pred cCeeEEEEeC
Q 018437 283 AGVGWVVWRT 292 (356)
Q Consensus 283 ~g~g~l~~~~ 292 (356)
.++|.++.++
T Consensus 276 ~p~~av~~~~ 285 (423)
T PRK05964 276 LPLAATLCTA 285 (423)
T ss_pred ccceEEEEcH
Confidence 5778877653
No 315
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=98.85 E-value=5.7e-07 Score=87.45 Aligned_cols=202 Identities=11% Similarity=-0.047 Sum_probs=116.3
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++.-...... ...+...++.+.+.++.+.. ....++++|+||+..|++.++.....
T Consensus 56 h~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~la~~L~~~~~~~------~~v~f~~sGseA~e~AlklAr~~~~~--- 124 (408)
T PRK04612 56 HNDPDLVAALTEQAGKLWHTSNV--FYSAPPLKLAEELVTASRFA------EKVFLCNSGTEANEAAIKLVRKWASS--- 124 (408)
T ss_pred CCCHHHHHHHHHHHHhccccccc--cCCHHHHHHHHHHHhhCCCC------CEEEEcCchHHHHHHHHHHHHHHHHh---
Confidence 34578888888776542221111 11223345666677665321 24789999999999999999875421
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHHhhCCeeEE---EEecCC-c--cccCHHHHHHHHhhCceEEEEecCCCcccccC
Q 018437 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEVELKE---VKLEEG-Y--YVMNPVKAVELVDENTICVAAILGSTLTGEFE 219 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~-~h~s~~~~~~~~G~~v~~---v~~~~~-~--~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~ 219 (356)
.|.+.++.+|+.-.. .|-...-+....|-.... -|...+ . -.-|++.|++++.++..+.++.-|.+.+|.+.
T Consensus 125 -~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP~~~~gg~~ 203 (408)
T PRK04612 125 -QGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDVAAVMLEPIQGEGGVM 203 (408)
T ss_pred -hCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCCCCEEEEEECCccCCCCCc
Confidence 121112345665444 444333333322211100 011100 0 01278999999876566666777777777652
Q ss_pred C-----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccC--CCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 220 D-----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL--PLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 220 ~-----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~--~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
+ +++|.++|++| ++++++|++|.++... .. .+.... ...|.++ .-|.+++.+.+|+++.++
T Consensus 204 ~~~~~~l~~l~~l~~~~------g~llI~DEv~tg~gr~---G~-~~a~~~~~~~pdi~t--~~K~l~~G~piga~~~~~ 271 (408)
T PRK04612 204 PAAPGFLARVRALCDQH------DALLVLDEIQCGMGRT---GT-LFAHWQEQVTPDIVT--LAKALGGGFPIGAMLAGP 271 (408)
T ss_pred CCCHHHHHHHHHHHHHc------CCEEEEeccccCCCcC---Cc-hhhhhhcCCCCCEEE--EcchhcCCCceEEEEECH
Confidence 2 88999999999 9999999999864321 11 011111 1245555 468876656788887754
No 316
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=98.83 E-value=9.6e-07 Score=86.75 Aligned_cols=198 Identities=11% Similarity=-0.108 Sum_probs=117.3
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.+......... ....+.+.++.+.+.++++... ....++++||||+..|++.++...
T Consensus 57 h~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~la~~L~~~~p~~~-----~~v~f~~sGsEAve~AlklAr~~t----- 125 (443)
T PRK08360 57 HNNPRVVKAIKEQTDKLIHYTPI-YGFPVEPLLLAEKLIEIAPGDN-----PKVSFGLSGSDANDGAIKFARAYT----- 125 (443)
T ss_pred CCCHHHHHHHHHHHHhccCcccc-ccCcHHHHHHHHHHHHhCCCCC-----CEEEEcCCHHHHHHHHHHHHHHhc-----
Confidence 34578888888777643222111 1112344466777888765432 247899999999999999987641
Q ss_pred hcCCCCCCCeEEecC-CCcchHHHHHHhhCC------------eeEEEEecCC-c--cc--------cCHHHHHHHHh--
Q 018437 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYFEV------------ELKEVKLEEG-Y--YV--------MNPVKAVELVD-- 200 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~-~~h~s~~~~~~~~G~------------~v~~v~~~~~-~--~~--------~d~~~L~~~i~-- 200 (356)
| +.+|+.-. ..|-...-+....|. ++..+|.... . +. -+++.+++.+.
T Consensus 126 --g----r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 199 (443)
T PRK08360 126 --K----RRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGE 199 (443)
T ss_pred --C----CCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhc
Confidence 1 34555543 334332222222221 2344544321 0 10 23455666664
Q ss_pred ---hCceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcc-cccCCCceEEE
Q 018437 201 ---ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSIN 272 (356)
Q Consensus 201 ---~~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~Ds~~ 272 (356)
+++++|++.-..+++|.+-+ +++|.++|++| |+++++|++|.++.. ...-... .+. ...|.++
T Consensus 200 ~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~------g~llI~DEv~~g~gr--~G~~~a~~~~~-~~pDiit 270 (443)
T PRK08360 200 VYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEH------GILLVVDEVQSGLGR--TGKWFAIEHFG-VEPDIIT 270 (443)
T ss_pred cCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CccchhhhhcC-CCCCEEE
Confidence 35777877766688898744 89999999999 999999999987432 1110001 111 1246665
Q ss_pred EcCCcCCCCCcCeeEEEEeC
Q 018437 273 VSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 273 ~~~hK~l~~P~g~g~l~~~~ 292 (356)
+ .|.+.+.+..|+++.++
T Consensus 271 l--sK~l~~G~pigav~~~~ 288 (443)
T PRK08360 271 L--GKPLGGGLPISATIGRA 288 (443)
T ss_pred e--cccccCCceeEEEEEcH
Confidence 4 78877656788888753
No 317
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=98.83 E-value=8.2e-07 Score=87.20 Aligned_cols=198 Identities=13% Similarity=-0.054 Sum_probs=114.0
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.+...... .........+.++.+.+.+++.-+. .....++++||||+..|++.++..
T Consensus 70 h~~p~v~~Ai~~ql~~~~~~-~~~~~~~~~~~~lAe~L~~~~p~~~----~~~v~f~~SGsEA~e~AlklAr~~------ 138 (441)
T PRK05769 70 HAHPKVVKAVKEQAEKFLHY-SLTDFYYEPAVELAERLVEIAPGGF----EKKVFFTNSGTESNEAAIKIARYH------ 138 (441)
T ss_pred CCCHHHHHHHHHHHHhccCc-cCcccCCHHHHHHHHHHHHhCCCCC----CCEEEECCchHHHHHHHHHHHHHH------
Confidence 34578888888777542211 1111112345567777888764211 124789999999999999999864
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHHhhC-------------CeeEEEEecCCccc-------------cCHHHHHHHH
Q 018437 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFE-------------VELKEVKLEEGYYV-------------MNPVKAVELV 199 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~-~h~s~~~~~~~~G-------------~~v~~v~~~~~~~~-------------~d~~~L~~~i 199 (356)
.| +.+|+.-.. .|-...-++...| -++..+|.... ++ -+++.+++.+
T Consensus 139 -tg----r~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~le~~~ 212 (441)
T PRK05769 139 -TG----RKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNP-YRNPWGIENPEECGNAVLDFIEDYL 212 (441)
T ss_pred -hC----CCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCcc-ccccccCCchHHHHHHHHHHHHHHH
Confidence 11 355665443 4433322222221 12344444210 11 1234466523
Q ss_pred -h-----hCceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc--CCC
Q 018437 200 -D-----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPL 267 (356)
Q Consensus 200 -~-----~~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~ 267 (356)
+ +++.+|++-......|.+.| +++|.++|++| |+++++|+++.++... .. -+.+. -..
T Consensus 213 ~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~------g~lli~DEv~tG~gr~---G~-~~a~~~~gv~ 282 (441)
T PRK05769 213 FKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKY------GILLIDDEVQTGMGRT---GK-MFAIEHFGVE 282 (441)
T ss_pred HhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhCCCcc---cc-eehhhccCCC
Confidence 2 24566666666666677777 99999999999 9999999999864221 10 01111 012
Q ss_pred ceEEEEcCCcCCCCCcCeeEEEEeCC
Q 018437 268 VKSINVSGHKYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 268 ~Ds~~~~~hK~l~~P~g~g~l~~~~~ 293 (356)
.|.++++ |.+++.+..|.++.+++
T Consensus 283 pDivt~~--K~l~~G~p~gav~~~~~ 306 (441)
T PRK05769 283 PDIITLA--KAIAGGLPLGAVIGRAE 306 (441)
T ss_pred CCEEEEc--ccccCCcccEEEEEehh
Confidence 4777754 77666577888877643
No 318
>PRK06541 hypothetical protein; Provisional
Probab=98.82 E-value=8.6e-07 Score=87.47 Aligned_cols=205 Identities=13% Similarity=-0.026 Sum_probs=115.5
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++...... ......+...++.+.+.+++..+. ....++++|+||+..|++.++..+..
T Consensus 68 h~~p~v~~Av~~q~~~~~~~~-~~~~~~~~~~~la~~l~~~~p~~~-----~~v~f~~sGseAve~AlklAr~~~~~--- 138 (460)
T PRK06541 68 HGRAELAEAAAKQAGTLAFFP-LWSYAHPPAIELAERLAALAPGDL-----NRVFFTTGGSEAVESAWKLAKQYFKL--- 138 (460)
T ss_pred CCCHHHHHHHHHHHhhCcCcc-ccccCCHHHHHHHHHHHHhCCCCc-----CEEEEcCCcHHHHHHHHHHHHHHHHh---
Confidence 345788888887776432111 111122334456666777754221 24789999999999999999875321
Q ss_pred hcCCCCCCCeEEec-CCCcchHHHHHHhhC------------CeeEEEEecCCccc-----cC--------HHHHHHHHh
Q 018437 147 EQGKPYDKPNIVTG-ANVQVCWEKFARYFE------------VELKEVKLEEGYYV-----MN--------PVKAVELVD 200 (356)
Q Consensus 147 ~~g~~~~~~~vi~s-~~~h~s~~~~~~~~G------------~~v~~v~~~~~~~~-----~d--------~~~L~~~i~ 200 (356)
.|.+ .+.+|+.- ...|-...-+....| .++..+|.... ++ -| ++.+++.+.
T Consensus 139 -~g~~-~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~ 215 (460)
T PRK06541 139 -TGKP-GKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNF-YRAPELGDDPEAFGRWAADRIEEAIE 215 (460)
T ss_pred -cCCC-CccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCcc-ccccccCCCHHHHHHHHHHHHHHHHH
Confidence 1111 13455543 344443332222211 12344443210 11 12 367788775
Q ss_pred h----CceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEE
Q 018437 201 E----NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSIN 272 (356)
Q Consensus 201 ~----~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~ 272 (356)
. ++.+|++.-..+..|.+.+ +++|.++|+++ |+++++|+++.++.. ..........-...|.++
T Consensus 216 ~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~------g~llI~DEV~tGfGR--~G~~~a~~~~gv~PDivt 287 (460)
T PRK06541 216 FEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRY------DVLLVSDEVICAFGR--LGEMFGCERFGYVPDIIT 287 (460)
T ss_pred hcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--CchhhhhhhcCCCCCEEE
Confidence 2 3445554444777788877 99999999999 999999999955422 110000110011357666
Q ss_pred EcCCcCCCCCc-CeeEEEEeCC
Q 018437 273 VSGHKYGLVYA-GVGWVVWRTK 293 (356)
Q Consensus 273 ~~~hK~l~~P~-g~g~l~~~~~ 293 (356)
.-|.+++.+ ..|.++.+++
T Consensus 288 --~gK~l~~G~~pigav~~~~~ 307 (460)
T PRK06541 288 --CAKGITSGYSPLGAMIASDR 307 (460)
T ss_pred --ecccccCCccceeEEEEcHH
Confidence 468776654 5788877643
No 319
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=98.82 E-value=5.3e-07 Score=88.45 Aligned_cols=197 Identities=12% Similarity=-0.058 Sum_probs=116.1
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++......... ...+.+.++.+.++++++-.. ....++++|+||+..|++.++...
T Consensus 59 h~~p~v~~a~~~q~~~~~~~~~~~-~~~~~~~~la~~L~~~~~~~~-----~~v~f~~SGseA~e~AlklAr~~t----- 127 (433)
T PRK08117 59 HRHPKVVQAIKEQADKLMHGPSGV-IYYESILKLAEELAEITPGGL-----DCFFFSNSGAEAIEGALKLAKHVT----- 127 (433)
T ss_pred CCCHHHHHHHHHHHHhccCccccc-cCCHHHHHHHHHHHHhCCCCC-----CEEEEeCcHHHHHHHHHHHHHHhc-----
Confidence 345788888887776422211111 122344566677888763211 247899999999999999887641
Q ss_pred hcCCCCCCCeEEe-cCCCcchHHHHHHhhC-------------CeeEEEEecCCccc------------cCHHHHHHHHh
Q 018437 147 EQGKPYDKPNIVT-GANVQVCWEKFARYFE-------------VELKEVKLEEGYYV------------MNPVKAVELVD 200 (356)
Q Consensus 147 ~~g~~~~~~~vi~-s~~~h~s~~~~~~~~G-------------~~v~~v~~~~~~~~------------~d~~~L~~~i~ 200 (356)
| +.+|+. ....|-+..-+....+ -++..+|.... ++ -|+++|++.++
T Consensus 128 --g----r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~ 200 (433)
T PRK08117 128 --K----RPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYC-DRCPKGEDPEVCFLECLRDLESLFK 200 (433)
T ss_pred --C----CCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCcc-ccccccCchhHHHHHHHHHHHHHHH
Confidence 1 345554 4445554333322211 12344554321 11 15566777764
Q ss_pred -----hCceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcc-cccCCCceE
Q 018437 201 -----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKS 270 (356)
Q Consensus 201 -----~~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~Ds 270 (356)
+++.+|++--.....|.+.| +++|.++|++| |+++++|++|.++... ..-... .+.+ ..|.
T Consensus 201 ~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEv~tG~gr~--G~~~~~~~~gv-~pDi 271 (433)
T PRK08117 201 HQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRH------GILLIFDEVQTGFGRT--GEWFAAQTFGV-VPDI 271 (433)
T ss_pred hccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHc------CCEEEEecchhccCcc--ccchhHhhcCC-CCCE
Confidence 24566776666666677777 99999999999 9999999999874221 000000 1111 2455
Q ss_pred EEEcCCcCCCCCcCeeEEEEeC
Q 018437 271 INVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 271 ~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
+ +.-|.+++...+|+++.++
T Consensus 272 ~--t~sK~lg~G~pigav~~~~ 291 (433)
T PRK08117 272 M--TIAKGIASGLPLSAVVASK 291 (433)
T ss_pred e--ehhhhccCCCcceeEEEcH
Confidence 4 4679877656688887764
No 320
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=98.81 E-value=3.4e-07 Score=87.15 Aligned_cols=188 Identities=12% Similarity=-0.032 Sum_probs=125.0
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+-+|.|.+++.+.+......- .-.++|-++.+.+.++++.-+ .+-++++||||++.|++.+|..-
T Consensus 69 H~~p~V~~Av~~~l~~G~~fg----~Pte~Ei~~Aell~~~~p~~e------~vrfvnSGTEAtmsAiRlARa~T----- 133 (432)
T COG0001 69 HAHPAVVEAVQEQLERGLSFG----APTELEVELAELLIERVPSIE------KVRFVNSGTEATMSAIRLARAYT----- 133 (432)
T ss_pred CCCHHHHHHHHHHHHhcCCCC----CCCHHHHHHHHHHHHhcCccc------EEEEecchhHHHHHHHHHHHHhh-----
Confidence 345789999988886543221 224567778888999876621 37799999999999999998751
Q ss_pred hcCCCCCCCeEE-ecCCCcchHHHHHHhhC-------------Ce------eEEEEecCCccccCHHHHHHHHhh---Cc
Q 018437 147 EQGKPYDKPNIV-TGANVQVCWEKFARYFE-------------VE------LKEVKLEEGYYVMNPVKAVELVDE---NT 203 (356)
Q Consensus 147 ~~g~~~~~~~vi-~s~~~h~s~~~~~~~~G-------------~~------v~~v~~~~~~~~~d~~~L~~~i~~---~~ 203 (356)
++++|+ +....|-.......-.| +. ++.+|.+ |+++|++++.+ +.
T Consensus 134 ------gR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN------D~~al~~~~~~~g~~I 201 (432)
T COG0001 134 ------GRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN------DLEALEEAFEEYGDDI 201 (432)
T ss_pred ------CCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC------CHHHHHHHHHHcCCcE
Confidence 145555 45555655444443322 11 3334432 78999999976 46
Q ss_pred eEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCC
Q 018437 204 ICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG 279 (356)
Q Consensus 204 ~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l 279 (356)
.+|++--.-...|.+-| ++++.++|+++ |++||.|++..++-.++-.....+.+ ..|..+ .-|.+
T Consensus 202 AaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~------G~lLI~DEViTGFR~~~gGaq~~~gi---~PDltt--lGKiI 270 (432)
T COG0001 202 AAVIVEPVAGNMGVVPPEPGFLEGLRELTEEH------GALLIFDEVITGFRVALGGAQGYYGV---EPDLTT--LGKII 270 (432)
T ss_pred EEEEeccccCCCCCCCCCHHHHHHHHHHHHHc------CcEEEEecchhhcccCCcccccccCc---Ccchhh--hhhhh
Confidence 67777776777788744 67899999999 99999999987754432111111111 245554 56998
Q ss_pred CCCcCeeEEEEeC
Q 018437 280 LVYAGVGWVVWRT 292 (356)
Q Consensus 280 ~~P~g~g~l~~~~ 292 (356)
++...+|++--|+
T Consensus 271 GGGlP~ga~gGr~ 283 (432)
T COG0001 271 GGGLPIGAFGGRA 283 (432)
T ss_pred cCCcceeeeccHH
Confidence 8888899987664
No 321
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=98.79 E-value=2.9e-09 Score=93.76 Aligned_cols=227 Identities=14% Similarity=0.063 Sum_probs=148.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHh
Q 018437 94 TELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARY 173 (356)
Q Consensus 94 ~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~ 173 (356)
..+-.+.....-++.|+.... +...+-+.+| +++.+++...|.+.++ -..|+.+.....|..+..-.
T Consensus 56 ~~isne~a~~~i~l~glhav~-nc~vvpl~tg--mslslc~~s~r~krpk----------akyiiw~ridqks~~ksi~~ 122 (432)
T KOG3843|consen 56 ACISNEFAKDAIHLAGLHAVA-NCFVVPLATG--MSLSLCFLSLRHKRPK----------AKYIIWLRIDQKSCFKSIIH 122 (432)
T ss_pred HHHHHHHHHHHHHHhhhhhhh-ceeEEecccc--ccHHHHHHHHhhcCCc----------ccEEEEEecchHHHHHHHHh
Confidence 344556666667778876521 1222334445 6667777777665221 23688888888888888888
Q ss_pred hCCeeEEEEe--cCCccccCHHHHHHHHhh-CceEEEEecCCCcccc---cCCHHHHHHHHHHhhhccCCCCcEEEeccc
Q 018437 174 FEVELKEVKL--EEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGE---FEDVKLLHDLLTKKNEETGWDTPIHVDAAS 247 (356)
Q Consensus 174 ~G~~v~~v~~--~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~---~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~ 247 (356)
.|++++.|+. +.+....|+++++..+++ .+.+|...+.+|..-+ .|.+++|+.+|..| +++-+|..||
T Consensus 123 agfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~------diphivnnay 196 (432)
T KOG3843|consen 123 AGFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAH------DIPHIVNNAY 196 (432)
T ss_pred cCCCceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHcc------Cchhhhcccc
Confidence 8999887764 334578899999999876 3445555555555443 48999999999999 9999999999
Q ss_pred ccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCCCChhHHHH
Q 018437 248 GGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIA 327 (356)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~ 327 (356)
|......+. .....-...++|.++-|..|.+++|.|..++..-++.+.+ . ....|++.. ++...+.
T Consensus 197 glqsee~i~-~iaa~~~~grida~vqsldknf~vpvggaiia~fk~n~iq-~--iak~ypgra----------sa~ps~d 262 (432)
T KOG3843|consen 197 GLQSEECIH-KIAAAAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQ-E--IAKMYPGRA----------SASPSLD 262 (432)
T ss_pred ccchHHHHH-HHHHHhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHH-H--HHHhCCCcc----------ccCccHH
Confidence 864321110 0111112568999999999999999986665432222221 1 122344443 3344666
Q ss_pred HHHHHHHhCHHHHHHHHHHHHhccCc
Q 018437 328 QYYQFIRLGFEEITFTFISSLKVCPF 353 (356)
Q Consensus 328 ~~~~l~~lg~~G~~~~~~~~~~~a~~ 353 (356)
+..+|..+|+.++.+......++--|
T Consensus 263 llitll~~gqn~f~e~~~eqkemf~~ 288 (432)
T KOG3843|consen 263 LLITLLSLGQNAFKELFGEQKEMFLK 288 (432)
T ss_pred HHHHHHHhchhHHHHHHHHHHHHHHH
Confidence 77888889999988887776655433
No 322
>PRK12403 putative aminotransferase; Provisional
Probab=98.78 E-value=1.2e-06 Score=86.40 Aligned_cols=204 Identities=13% Similarity=-0.004 Sum_probs=116.1
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.++.............+...++.+.++++++.+. ....++++||||+..|++.++..+..
T Consensus 71 ~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGseA~e~AiklAr~~~~~---- 141 (460)
T PRK12403 71 GRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGHY-----SHAIYTNSGSEANEVLIRTVRRYWQV---- 141 (460)
T ss_pred CCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCCcHHHHHHHHHHHHHHHHh----
Confidence 457888888888765322111112223445567777888876321 23789999999999999999875321
Q ss_pred cCCCCCCCeEEe-cCCCcchHHHHHHhhCCe-----------eEEEEecCC---ccc--------cCHHHHHHHHh----
Q 018437 148 QGKPYDKPNIVT-GANVQVCWEKFARYFEVE-----------LKEVKLEEG---YYV--------MNPVKAVELVD---- 200 (356)
Q Consensus 148 ~g~~~~~~~vi~-s~~~h~s~~~~~~~~G~~-----------v~~v~~~~~---~~~--------~d~~~L~~~i~---- 200 (356)
.|.+ .+..|+. ....|-+..-++...|.. +..+|.... .+. .+.+.|++.+.
T Consensus 142 ~g~~-~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~ 220 (460)
T PRK12403 142 LGKP-QKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGA 220 (460)
T ss_pred hCCC-CCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCC
Confidence 1110 1223433 334465544444433322 333432110 001 11355666653
Q ss_pred hCceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccc-ccCCCceEEEEcC
Q 018437 201 ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINVSG 275 (356)
Q Consensus 201 ~~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~Ds~~~~~ 275 (356)
+++.+|++-.....-|.+.| +++|.++|++| |+++++|++++|+... ..-...+ +.+ ..|.++ .
T Consensus 221 ~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~------g~lLI~DEV~tGfGRt--G~~~a~e~~gv-~PDiv~--~ 289 (460)
T PRK12403 221 ENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQY------DVLLCADEVIGGFGRT--GEWFAHEHFGF-EPDTLS--I 289 (460)
T ss_pred CceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCcC--chhhhhhhcCC-CCCeEE--E
Confidence 24556666665555677766 99999999999 9999999999775321 1000001 111 247776 4
Q ss_pred CcCCCCCc-CeeEEEEeC
Q 018437 276 HKYGLVYA-GVGWVVWRT 292 (356)
Q Consensus 276 hK~l~~P~-g~g~l~~~~ 292 (356)
-|.+++.+ .+|.++.++
T Consensus 290 gK~lggG~~Piga~v~~~ 307 (460)
T PRK12403 290 AKGLTSGYVPMGGLVLSK 307 (460)
T ss_pred cccccccccceEEEEECH
Confidence 68876664 677777754
No 323
>PLN00144 acetylornithine transaminase
Probab=98.78 E-value=1.2e-06 Score=84.58 Aligned_cols=197 Identities=13% Similarity=-0.075 Sum_probs=114.8
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++........+ ..+...++.+.+.++.+.+ ...++++||||+..|++.++..... +
T Consensus 31 h~~p~v~~ai~~q~~~~~~~~~~~--~~~~~~~la~~l~~~~~~~-------~v~f~~sGseA~e~AlklAr~~~~~-~- 99 (382)
T PLN00144 31 HGDPDWVKAVAEQAGTLAHVSNVY--HTIPQVELAKRLVASSFAD-------RVFFCNSGTEANEAAIKFARKYQRV-R- 99 (382)
T ss_pred CCCHHHHHHHHHHHHhcCCccccc--cCHHHHHHHHHHHhcCCCC-------eEEEeCCcHHHHHHHHHHHHHHHhc-c-
Confidence 345788888887776422111111 1233445666677765433 3789999999999999999865321 1
Q ss_pred hcCCCCC------CCeEEecC-CCcchHHHHHHhhCCe------------eEEEEecCCccccCHHHHHHHHhh-CceEE
Q 018437 147 EQGKPYD------KPNIVTGA-NVQVCWEKFARYFEVE------------LKEVKLEEGYYVMNPVKAVELVDE-NTICV 206 (356)
Q Consensus 147 ~~g~~~~------~~~vi~s~-~~h~s~~~~~~~~G~~------------v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v 206 (356)
+.... +.+|+.-. ..|-...-+....+-. +..+|. -|+++|++.+.+ ++++|
T Consensus 100 --~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~~~~~~~aav 171 (382)
T PLN00144 100 --APDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEY------GNLEAARKLIQKGKTAAV 171 (382)
T ss_pred --CCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCC------CCHHHHHHhcCCCCeEEE
Confidence 11110 24555544 4444333333322211 122221 168999988864 46677
Q ss_pred EEecCCCccccc--CC--HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCC
Q 018437 207 AAILGSTLTGEF--ED--VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY 282 (356)
Q Consensus 207 ~~~~~~~~tG~~--~~--i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P 282 (356)
++.-..++.|.. ++ +++|.++|++| ++++|.|+++.++... ..-...+..-...|.+ +.-|.+.+.
T Consensus 172 i~eP~q~~gg~~~~~~~~~~~l~~l~~~~------g~llI~DEv~tg~gr~--g~~~~~~~~~~~PDi~--t~sK~l~~G 241 (382)
T PLN00144 172 FVEPVQGEGGIYPATKEFLQGLRALCDEA------GALLVFDEVQCGLGRT--GYLWAHEAYGVEPDIM--TLAKPLAGG 241 (382)
T ss_pred EEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCcc--chHhhhhhcCCCCCEE--EecccccCC
Confidence 766666664443 34 89999999999 9999999999875331 1000111111124544 456988766
Q ss_pred cCeeEEEEeC
Q 018437 283 AGVGWVVWRT 292 (356)
Q Consensus 283 ~g~g~l~~~~ 292 (356)
..+|+++.++
T Consensus 242 ~pig~v~~~~ 251 (382)
T PLN00144 242 LPIGAVLVTE 251 (382)
T ss_pred cceEEEEEcH
Confidence 7889998864
No 324
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=98.78 E-value=1.2e-08 Score=89.69 Aligned_cols=115 Identities=20% Similarity=0.160 Sum_probs=97.3
Q ss_pred CCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHH
Q 018437 118 AVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVE 197 (356)
Q Consensus 118 ~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~ 197 (356)
..+++..|+.|.+-..+++.+.+ | +.+|+...|++..|.-.+...+++|+++|.+.+ +.++.+++.+
T Consensus 87 dnic~GvGsDE~ID~iiR~~c~P--------G----keKIl~cPPtysMY~v~A~iNd~eVvkvpl~pd-F~lnvdai~e 153 (375)
T KOG0633|consen 87 DNICVGVGSDELIDLIIRCVCDP--------G----KEKILDCPPTYSMYVVDAAINDAEVVKVPLNPD-FSLNVDAIAE 153 (375)
T ss_pred cceEEecCcHHHHHHHHhheecC--------C----ccceeecCCcceeEEEEeecCCceEEEecCCCC-ccccHHHHHH
Confidence 34889999999999999998875 1 467888889888887788889999999999985 9999999999
Q ss_pred HHhh--CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccc
Q 018437 198 LVDE--NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGF 250 (356)
Q Consensus 198 ~i~~--~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~ 250 (356)
.+.. .++++++++|+||||.+...+.|.++.+ ++. +.+++||+||-.|
T Consensus 154 vl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe-~p~----nglVVvDEAYidF 203 (375)
T KOG0633|consen 154 VLELDSKIKCIFLTSPGNPTGSIIKEDDILKILE-MPD----NGLVVVDEAYIDF 203 (375)
T ss_pred HHhccccceEEEEcCCCCCCcccccHHHHHHHHh-CCC----CcEEEEeeeeEee
Confidence 9875 5789999999999999988888888875 433 6899999998653
No 325
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.77 E-value=7.4e-07 Score=87.28 Aligned_cols=194 Identities=12% Similarity=-0.020 Sum_probs=114.8
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.+....... . ....+.++.+.+.+++.. . ....++++||||+..|++.+|...
T Consensus 69 h~~p~v~~ai~~q~~~~~~~~--~--~~~~~~~la~~l~~~~p~-~-----~~v~f~~sGseA~e~AlklAr~~t----- 133 (428)
T PRK12389 69 HAHPHITKAITEAAENGVLYG--T--PTELEIEFAKMLKEAIPS-L-----EKVRFVNSGTEAVMTTIRVARAYT----- 133 (428)
T ss_pred CCCHHHHHHHHHHHHhCCccC--C--CCHHHHHHHHHHHHhCCC-C-----cEEEEeCCHHHHHHHHHHHHHHhh-----
Confidence 345788888887776432211 1 123345666677776531 1 247899999999999999998741
Q ss_pred hcCCCCCCCeEEecC-CCcchHHHHHHhhCCeeEE--------EE--ecCCcc---ccCHHHHHHHHhh---CceEEEEe
Q 018437 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYFEVELKE--------VK--LEEGYY---VMNPVKAVELVDE---NTICVAAI 209 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~-~~h~s~~~~~~~~G~~v~~--------v~--~~~~~~---~~d~~~L~~~i~~---~~~~v~~~ 209 (356)
| +.+|+.-. ..|-...-++...|..... ++ ..++.. .-|++.|++.+++ ++.+|++.
T Consensus 134 --g----r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~E 207 (428)
T PRK12389 134 --G----RTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVE 207 (428)
T ss_pred --C----CCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEe
Confidence 1 34555444 4454333333322211100 00 000000 1168899988863 45677776
Q ss_pred cCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCe
Q 018437 210 LGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV 285 (356)
Q Consensus 210 ~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~ 285 (356)
-.....|.+.| +++|.++|+++ |+++++|+++.|+=..+......+++ ..|.+++ -|.+++....
T Consensus 208 Pv~g~~G~~~p~~~yl~~l~~lc~~~------g~llI~DEV~tG~Rt~~~~a~~~~gv---~PDivt~--gK~lggG~Pi 276 (428)
T PRK12389 208 PIVGNFGIVEPKPGFLEAVNELAHEA------GALVIYDEVITAFRFMYGGAQDLLGV---EPDLTAL--GKIIGGGLPI 276 (428)
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEEccccccccCcchhhHHhCC---CCCeeee--chhhcCCCce
Confidence 66666687777 99999999999 99999999998751111100001111 3566654 5877666667
Q ss_pred eEEEEeC
Q 018437 286 GWVVWRT 292 (356)
Q Consensus 286 g~l~~~~ 292 (356)
|.++.++
T Consensus 277 ~av~~~~ 283 (428)
T PRK12389 277 GAYGGRK 283 (428)
T ss_pred eEEeEHH
Confidence 8887654
No 326
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=98.77 E-value=1.6e-06 Score=84.84 Aligned_cols=203 Identities=12% Similarity=-0.028 Sum_probs=113.2
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEE-eCChhHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG-TVGSSEAIMLAGLAFKRKWQQKR 145 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~-t~Ggt~a~~~al~~~~~~~~~~~ 145 (356)
+.+|.+.+++.+.+......... ........++.+.+++++..+... .....+ +++||||+..|++.+|..
T Consensus 55 h~~p~v~~ai~~ql~~~~~~~~~-~~~~~~~~~lae~l~~~~~~~~~~--~~~~~f~~~sGseA~e~AlklAr~~----- 126 (425)
T PRK09264 55 HNNPVLKQALIDYLQRDGITHGL-DMHTTAKREFLETFEETILKPRGL--DYKVQFTGPTGTNAVEAALKLARKV----- 126 (425)
T ss_pred CCCHHHHHHHHHHHHhccccccc-ccCcHHHHHHHHHHHHhhcCCcCC--CceEEEeCCCHHHHHHHHHHHHHHh-----
Confidence 34578888888776542111111 111234445666677765322100 012445 479999999999999864
Q ss_pred HhcCCCCCCCeEEecCCC-cchHHHHHHhh---------C---CeeEEEEecCC-ccc-cCHHHHHHHHhh------Cce
Q 018437 146 KEQGKPYDKPNIVTGANV-QVCWEKFARYF---------E---VELKEVKLEEG-YYV-MNPVKAVELVDE------NTI 204 (356)
Q Consensus 146 ~~~g~~~~~~~vi~s~~~-h~s~~~~~~~~---------G---~~v~~v~~~~~-~~~-~d~~~L~~~i~~------~~~ 204 (356)
.| +.+||.-..+ |-...-++... + ..+..+|.... ... -|+++|++.+++ ++.
T Consensus 127 --tg----r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a 200 (425)
T PRK09264 127 --TG----RTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPA 200 (425)
T ss_pred --cC----CCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceE
Confidence 11 3456654443 43322222221 1 12455665321 001 267888888853 345
Q ss_pred EEEEecCCCccccc----CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCC
Q 018437 205 CVAAILGSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL 280 (356)
Q Consensus 205 ~v~~~~~~~~tG~~----~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~ 280 (356)
+|++--.....|.+ +.+++|.++|++| |+++++|+++.|+... ......+...-..|.++++ |.++
T Consensus 201 avi~Epv~g~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEV~tG~Grt--G~~~~~~~~~v~PDi~t~~--K~l~ 270 (425)
T PRK09264 201 AVIVETVQGEGGINVASAEWLQRLAKLCRKH------DILLIVDDIQAGCGRT--GTFFSFERAGITPDIVTLS--KSIS 270 (425)
T ss_pred EEEEecccCCCCCcCCCHHHHHHHHHHHHHc------CcEEEEechhhCCccc--cHHHHHhhcCCCCCEEEec--cccC
Confidence 66666555555654 3689999999999 9999999999764220 0000011111135777664 9765
Q ss_pred C-CcCeeEEEEeCC
Q 018437 281 V-YAGVGWVVWRTK 293 (356)
Q Consensus 281 ~-P~g~g~l~~~~~ 293 (356)
. ...+|+++.+++
T Consensus 271 ~~G~pigav~~~~~ 284 (425)
T PRK09264 271 GYGLPMALVLIKPE 284 (425)
T ss_pred CCccceEEEEEchh
Confidence 4 445688888643
No 327
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=98.76 E-value=2.5e-06 Score=83.09 Aligned_cols=203 Identities=11% Similarity=-0.014 Sum_probs=115.2
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEE-eCChhHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG-TVGSSEAIMLAGLAFKRKWQQKR 145 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~-t~Ggt~a~~~al~~~~~~~~~~~ 145 (356)
+.+|.+.+++.+.+........ .....+...++.+.+++++..+... .....+ +++|+||+..|++.++..
T Consensus 51 h~~p~v~~ai~~ql~~~~~~~~-~~~~~~~~~~lae~l~~~~~~~~~~--~~~~~f~~~sGseA~e~AlklAr~~----- 122 (412)
T TIGR02407 51 HNNPKLKQALIDYLADDGIIHS-LDMATEAKREFLETFNEIILKPRGL--DYKVQFPGPTGTNAVESALKLARKV----- 122 (412)
T ss_pred CCCHHHHHHHHHHHhhccceec-cccCcHHHHHHHHHHHHhccCccCC--CceEEEeCCCchHHHHHHHHHHhhh-----
Confidence 4458888888877753211111 1112334445666677764222100 012445 579999999999999864
Q ss_pred HhcCCCCCCCeEEecCC-CcchHHHHHHhhC------------CeeEEEEecCC-cc-ccCHHHHHHHHhh------Cce
Q 018437 146 KEQGKPYDKPNIVTGAN-VQVCWEKFARYFE------------VELKEVKLEEG-YY-VMNPVKAVELVDE------NTI 204 (356)
Q Consensus 146 ~~~g~~~~~~~vi~s~~-~h~s~~~~~~~~G------------~~v~~v~~~~~-~~-~~d~~~L~~~i~~------~~~ 204 (356)
.| +++|+.-.. .|-...-+....| ..+..+|.... .. .-+++.+++.+++ ++.
T Consensus 123 --tg----r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a 196 (412)
T TIGR02407 123 --TG----RSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPA 196 (412)
T ss_pred --cC----CCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceE
Confidence 11 356665444 4433333332221 12344554320 00 1246778888862 456
Q ss_pred EEEEecCCCccccc----CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCC
Q 018437 205 CVAAILGSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL 280 (356)
Q Consensus 205 ~v~~~~~~~~tG~~----~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~ 280 (356)
+|++--.....|.+ +-+++|.++|++| |++++.|+++.|+... ......+..--..|.++++ |+++
T Consensus 197 avi~Epi~g~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEV~tG~GRt--G~~~a~~~~~v~PDi~~~~--K~lg 266 (412)
T TIGR02407 197 AVILETVQGEGGINVASDEWLQRLEKLCRRH------DILLIVDDIQAGCGRT--GTFFSFEPAGIEPDIVCLS--KSIS 266 (412)
T ss_pred EEEeccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCcc--chhHHhcccCCCCCEEEec--hhcc
Confidence 77766666666764 3479999999999 9999999999764220 0000011111135766654 9976
Q ss_pred C-CcCeeEEEEeCC
Q 018437 281 V-YAGVGWVVWRTK 293 (356)
Q Consensus 281 ~-P~g~g~l~~~~~ 293 (356)
+ ...+|+++.+++
T Consensus 267 ~~G~pigav~~~~~ 280 (412)
T TIGR02407 267 GYGLPLALTLIKPE 280 (412)
T ss_pred CCccceeEEEEchh
Confidence 5 566899998753
No 328
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=98.75 E-value=1.4e-06 Score=85.64 Aligned_cols=198 Identities=12% Similarity=-0.058 Sum_probs=111.4
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.+++.. +........+...++.+.+.+++.... .....++++|+||+..|++.++...
T Consensus 72 h~~p~v~~ai~~q~~~~~-~~~~~~~~~~~~~~la~~l~~~~p~~~----~~~v~f~~sGseA~e~AlklAr~~t----- 141 (443)
T PRK06058 72 NSAPRVVEAVREQVARFT-HTCFMVTPYEGYVAVAEQLNRLTPGDH----EKRSALFNSGAEAVENAVKIARSYT----- 141 (443)
T ss_pred CCCHHHHHHHHHHHHhcc-CccccccCCHHHHHHHHHHHHhCCCCC----CCEEEEeCCcHHHHHHHHHHHHHhh-----
Confidence 345788888887776421 111111123445567777888765321 0236888899999999999887641
Q ss_pred hcCCCCCCCeEEecCCCcch-HHHHHHhhC--------C-----eeEEEEecCCccc------c--------CHHHHHHH
Q 018437 147 EQGKPYDKPNIVTGANVQVC-WEKFARYFE--------V-----ELKEVKLEEGYYV------M--------NPVKAVEL 198 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~h~s-~~~~~~~~G--------~-----~v~~v~~~~~~~~------~--------d~~~L~~~ 198 (356)
| +++|+....+|+. ..-+....+ . .+..+|.... ++ . ..+.|++.
T Consensus 142 --g----r~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 214 (443)
T PRK06058 142 --G----RQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYP-YRDPKGLATDGEEAAARAITVIEKQ 214 (443)
T ss_pred --C----CCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcc-cccccccccchHHHHHHHHHHHHHh
Confidence 1 3567665554443 323322211 1 1333332110 11 1 12334444
Q ss_pred Hh-hCceEEEEecCCCcc-cccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEE
Q 018437 199 VD-ENTICVAAILGSTLT-GEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSIN 272 (356)
Q Consensus 199 i~-~~~~~v~~~~~~~~t-G~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~ 272 (356)
+. +++.+|++ -|-... |.+-| +++|.++|++| |+++++|+++.|+... .........--..|.++
T Consensus 215 ~~~~~iAavi~-EPi~g~gG~~~p~~~yl~~lr~lc~~~------gillI~DEV~tGfgRt--G~~fa~~~~gv~PDiv~ 285 (443)
T PRK06058 215 VGADNLAAVII-EPIQGEGGFIVPAEGFLPALLEWCREN------GVVFIADEVQTGFART--GAWFACEHEGIVPDLIT 285 (443)
T ss_pred hCCCceEEEEE-CCccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCcC--hhhhHHHhcCCCCCEEE
Confidence 43 34555554 444444 44433 89999999999 9999999999875321 10000011111357777
Q ss_pred EcCCcCCCCCcCeeEEEEeC
Q 018437 273 VSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 273 ~~~hK~l~~P~g~g~l~~~~ 292 (356)
++ |.+.+.+..|.++.++
T Consensus 286 ~g--K~l~~G~Pi~av~~~~ 303 (443)
T PRK06058 286 TA--KGIAGGLPLSAVTGRA 303 (443)
T ss_pred Ec--ccccCCCccEEEEEcH
Confidence 74 8877667788888764
No 329
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=98.73 E-value=2e-06 Score=84.74 Aligned_cols=194 Identities=11% Similarity=-0.015 Sum_probs=114.2
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.+.......... ......++.+.+++++..+. ....++++||||+..|++.+|.....
T Consensus 98 H~~p~v~~Ai~~ql~~l~~~~~~~--~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGsEAve~AlklAr~~t~~--- 167 (459)
T PRK11522 98 HRNPVVVSAVQNQLAKQPLHSQEL--LDPLRAMLAKTLAALTPGKL-----KYSFFCNSGTESVEAALKLAKAYQSP--- 167 (459)
T ss_pred CCCHHHHHHHHHHHhhCccccccc--CCHHHHHHHHHHHHhCCCCC-----CEEEEeCCchHHHHHHHHHHHHHhcc---
Confidence 345788888887776432221111 12334456666777754321 24789999999999999999865210
Q ss_pred hcCCCCCCCeEEecCCC-cchHHHHHHhhCCe------------eEEEEecCCccccCHHHHHHHHhh------CceEEE
Q 018437 147 EQGKPYDKPNIVTGANV-QVCWEKFARYFEVE------------LKEVKLEEGYYVMNPVKAVELVDE------NTICVA 207 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~-h~s~~~~~~~~G~~------------v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~ 207 (356)
+| +.+||....+ |-...-++...|-. +..+|. -|.+++++.++. ++.+|+
T Consensus 168 -~g----r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~l~~~~~~~~~iAavI 236 (459)
T PRK11522 168 -RG----KFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPF------GNIEAMRTALSECKKTGDDVAAVI 236 (459)
T ss_pred -CC----CcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCC------CCHHHHHHHHHHhhccCCcEEEEE
Confidence 01 2356655544 43332233222211 112221 167888888752 456777
Q ss_pred EecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCC-cccccCCCceEEEEcCCcCCCCC
Q 018437 208 AILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWDFRLPLVKSINVSGHKYGLVY 282 (356)
Q Consensus 208 ~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~Ds~~~~~hK~l~~P 282 (356)
+.......|.+.| ++++.++|++| |+++++|+++.|+.. . ... .....--..|.+++ -|.+++.
T Consensus 237 vEpv~g~~G~~~pp~~yl~~lr~lc~~~------g~llI~DEV~tG~GR--t-G~~~a~e~~gv~PDivt~--gK~lggG 305 (459)
T PRK11522 237 LEPIQGEGGVILPPEGYLTAVRKLCDEF------GALLILDEVQTGMGR--T-GKMFACEHENVQPDILCL--AKALGGG 305 (459)
T ss_pred EecccCCCCCccCCHHHHHHHHHHHHHc------CCEEEeccceecCCc--c-chhhhhhccCCCCCEEEe--chhhhCC
Confidence 7766666677776 99999999999 999999999976422 0 100 01101113576654 6887665
Q ss_pred -cCeeEEEEeC
Q 018437 283 -AGVGWVVWRT 292 (356)
Q Consensus 283 -~g~g~l~~~~ 292 (356)
..+|.++.++
T Consensus 306 ~~Pigav~~~~ 316 (459)
T PRK11522 306 VMPIGATIATE 316 (459)
T ss_pred CccceeEEEcH
Confidence 3577887764
No 330
>PRK07482 hypothetical protein; Provisional
Probab=98.72 E-value=1.7e-06 Score=85.47 Aligned_cols=206 Identities=12% Similarity=-0.089 Sum_probs=115.7
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++...+.........+.+.++.+.+.+++..+. ....++++||||+..|++.++.....
T Consensus 66 h~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~-----~~v~f~~sGSEAve~AlKlAr~~~~~--- 137 (461)
T PRK07482 66 YGRTEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAGM-----SKVYYGLSGSDANETQIKLVWYYNNV--- 137 (461)
T ss_pred CCCHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCchHHHHHHHHHHHHHHHHh---
Confidence 3458888888887765321111111223445567777887763221 23789999999999999999865321
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHHhhC------------CeeEEEEecCC-cc-----------ccCHHHHHHHHh-
Q 018437 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFE------------VELKEVKLEEG-YY-----------VMNPVKAVELVD- 200 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~-~h~s~~~~~~~~G------------~~v~~v~~~~~-~~-----------~~d~~~L~~~i~- 200 (356)
.|.. .+.+||.-.. .|-...-+....| -.+..++.... +. .-++++|++.+.
T Consensus 138 -~g~~-~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 215 (461)
T PRK07482 138 -LGRP-EKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILA 215 (461)
T ss_pred -cCCC-CCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHh
Confidence 1211 1345665443 3432211111111 12333433210 00 114677888884
Q ss_pred ---hCceEEEEecCCCccccc----CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEE
Q 018437 201 ---ENTICVAAILGSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINV 273 (356)
Q Consensus 201 ---~~~~~v~~~~~~~~tG~~----~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~ 273 (356)
+++.+|++.-.....|.+ .-+++|.++|++| |+++|+|+++.|+... ..-...+..--..|.+++
T Consensus 216 ~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~------giLlI~DEV~tGfGRt--G~~~a~~~~gv~PDiv~~ 287 (461)
T PRK07482 216 EGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKY------DILLIADEVVTGFGRL--GSMFGSDHYGIEPDLITV 287 (461)
T ss_pred cCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHh------CCEEEEeccccCCCcC--cchhhHHhcCCCCCEEEE
Confidence 245666666555444555 2378999999999 9999999999875321 100001111114688875
Q ss_pred cCCcCCCCCc-CeeEEEEeC
Q 018437 274 SGHKYGLVYA-GVGWVVWRT 292 (356)
Q Consensus 274 ~~hK~l~~P~-g~g~l~~~~ 292 (356)
-|.+.+.+ ..|.++.++
T Consensus 288 --gKgl~gG~~Pi~av~~~~ 305 (461)
T PRK07482 288 --AKGLTSAYAPLSGSIVGE 305 (461)
T ss_pred --ccccccCccccceeeecH
Confidence 58876654 567777764
No 331
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=98.71 E-value=6.4e-07 Score=87.65 Aligned_cols=198 Identities=10% Similarity=-0.083 Sum_probs=110.3
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.++......... .......++.+++.++.+.+.. ....++++|++|+..|+..++...
T Consensus 58 ~~~~i~~a~~~~~~~~~~~~~~~-~~~~~~~~la~~l~~~~~~~~~----~~~~f~~sGsea~e~Alklar~~~------ 126 (425)
T PRK08088 58 LHPKVVAAVEAQLKKLSHTCFQV-LAYEPYLELCEKMNQKVPGDFA----KKTLLVTTGSEAVENAVKIARAAT------ 126 (425)
T ss_pred CCHHHHHHHHHHHhhCCCccccc-cCCHHHHHHHHHHHHhCCCCCC----CEEEEeCCcHHHHHHHHHHHHHHh------
Confidence 35788888887776432111111 1112233677778887764321 246888899999999999987641
Q ss_pred cCCCCCCCeEEecCC-CcchHHHHHHhhCC-------------eeEE--EEecCCcccc--CHHHHHHHHh-----hCce
Q 018437 148 QGKPYDKPNIVTGAN-VQVCWEKFARYFEV-------------ELKE--VKLEEGYYVM--NPVKAVELVD-----ENTI 204 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~-~h~s~~~~~~~~G~-------------~v~~--v~~~~~~~~~--d~~~L~~~i~-----~~~~ 204 (356)
+ +..|+.-.+ .|....-+....+- ++.. +|.+...... +++.|++.++ ++..
T Consensus 127 -~----r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~a 201 (425)
T PRK08088 127 -K----RSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIA 201 (425)
T ss_pred -C----CCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceE
Confidence 1 234444344 44443332222110 0122 2222211111 1556888885 3445
Q ss_pred EEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCC-cccccCCCceEEEEcCCcCC
Q 018437 205 CVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWDFRLPLVKSINVSGHKYG 279 (356)
Q Consensus 205 ~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~Ds~~~~~hK~l 279 (356)
+|++.-....-|.+-+ +++|.++|+++ +++++.|++|+++..+ +.. .++..-.-.|. .+..|.+
T Consensus 202 avi~Epi~~~~G~~~~~~~~~~~l~~l~~~~------~~~lI~Dev~~g~g~~---g~~~~~~~~~~~pdi--~s~sK~l 270 (425)
T PRK08088 202 AIIIEPVQGEGGFYAASPAFMQRLRALCDEH------GIMLIADEVQTGAGRT---GTLFAMEQMGVAADL--TTFAKSI 270 (425)
T ss_pred EEEECcccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCcC---cchhHHhhcCCCCCE--EEEeccc
Confidence 5655554444455544 89999999999 9999999999874321 111 11111112343 4457988
Q ss_pred CCCcCeeEEEEeC
Q 018437 280 LVYAGVGWVVWRT 292 (356)
Q Consensus 280 ~~P~g~g~l~~~~ 292 (356)
.+.+.+|+++.+.
T Consensus 271 ~~G~rig~v~~~~ 283 (425)
T PRK08088 271 AGGFPLAGVTGRA 283 (425)
T ss_pred cCCCcceeeEecH
Confidence 7667789998753
No 332
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=98.70 E-value=1.4e-06 Score=85.67 Aligned_cols=202 Identities=12% Similarity=-0.013 Sum_probs=112.3
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++.-..... .....+...++.+.+++++.... ....++++|+||+..|++.++.....+
T Consensus 65 h~~p~v~~ai~~ql~~l~~~~~-~~~~~~~~~~la~~L~~~~p~~~-----~~v~f~~sGseAve~AlklAr~~~~~~-- 136 (445)
T PRK09221 65 HGRPEIVEAVARQAATLDYAPA-FQMGHPLAFELAERLAELAPGGL-----DHVFFTNSGSESVDTALKIALAYHRAR-- 136 (445)
T ss_pred CCCHHHHHHHHHHHHhccCccc-cccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCcHHHHHHHHHHHHHHHHhc--
Confidence 3457888888877764221111 11112334456677777764221 237899999999999999998753211
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHHhhC------------CeeEEEEecC--Cc--cc--------cCHHHHHHHHh-
Q 018437 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFE------------VELKEVKLEE--GY--YV--------MNPVKAVELVD- 200 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~-~h~s~~~~~~~~G------------~~v~~v~~~~--~~--~~--------~d~~~L~~~i~- 200 (356)
|.. .+.+||.-.. .|-...-+....| .++..+|... .. +. -..++|++.++
T Consensus 137 --g~~-~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 213 (445)
T PRK09221 137 --GQG-TRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVAL 213 (445)
T ss_pred --CCC-CCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHh
Confidence 111 1345654443 3432221111111 1233444321 00 00 12357777775
Q ss_pred ---hCceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccc---cccCCCCcccccCCCceE
Q 018437 201 ---ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIA---PFLYPDLEWDFRLPLVKS 270 (356)
Q Consensus 201 ---~~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~---~~~~~~~~~~~~~~~~Ds 270 (356)
+++.+|++--.....|.+.| +++|.++|+++ |+++++|+++.|+.. .|... ..++ ..|.
T Consensus 214 ~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~------g~llI~DEV~tG~GRtG~~~~~~--~~gv---~PDi 282 (445)
T PRK09221 214 HDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKH------GILLIFDEVITGFGRLGAAFAAE--RFGV---TPDI 282 (445)
T ss_pred cCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHc------CCEEEEeehhhCCCcCchhhHHH--hcCC---CCCE
Confidence 34567777777777788877 99999999999 999999999866422 01111 0111 2476
Q ss_pred EEEcCCcCCCCC-cCeeEEEEeC
Q 018437 271 INVSGHKYGLVY-AGVGWVVWRT 292 (356)
Q Consensus 271 ~~~~~hK~l~~P-~g~g~l~~~~ 292 (356)
+++ -|.+.+. ...|.++.++
T Consensus 283 ~~~--gK~l~gG~~Pi~av~~~~ 303 (445)
T PRK09221 283 ITF--AKGLTNGAIPMGAVIASD 303 (445)
T ss_pred EEe--ccccccCcccceeeEEcH
Confidence 664 4765433 2356666654
No 333
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=98.70 E-value=3.7e-06 Score=82.59 Aligned_cols=205 Identities=13% Similarity=-0.038 Sum_probs=113.7
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++.-..... .....+.+.++.+.+++++.... ....++++||||+..|++.++.....
T Consensus 62 h~~p~v~~ai~~ql~~l~~~~~-~~~~~~~~~~la~~l~~~~p~~~-----~~v~f~~sGseA~e~AlklAr~~~~~--- 132 (442)
T PRK13360 62 HGRPEIVEAVRAQAGELDYAPA-FQMGHPKAFELANRIAEIAPGGL-----NHVFFTNSGSESVDTALKIALAYHRA--- 132 (442)
T ss_pred CCCHHHHHHHHHHHHhCCCccc-CCcCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCcHHHHHHHHHHHHHHHHh---
Confidence 4457888888877764221111 11112334467777888763211 23789999999999999999875321
Q ss_pred hcCCCCCCCeEEecCCC-cchHHHHHHhhC------------CeeEEEEecCC--c--cc--------cCHHHHHHHHh-
Q 018437 147 EQGKPYDKPNIVTGANV-QVCWEKFARYFE------------VELKEVKLEEG--Y--YV--------MNPVKAVELVD- 200 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~-h~s~~~~~~~~G------------~~v~~v~~~~~--~--~~--------~d~~~L~~~i~- 200 (356)
.|. ..+.+||.-..+ |-...-+....| -.+..+|...+ . +. -..++|++++.
T Consensus 133 -~g~-~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~ 210 (442)
T PRK13360 133 -RGE-GSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTL 210 (442)
T ss_pred -cCC-CCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHh
Confidence 111 113456654444 432221211111 12344443210 0 10 12457788775
Q ss_pred ---hCceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEE
Q 018437 201 ---ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINV 273 (356)
Q Consensus 201 ---~~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~ 273 (356)
+++.+|++-......|.+.| +++|.++|++| |+++++|+++.|+.. ...-......--..|.+++
T Consensus 211 ~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~------g~llI~DEv~tG~Gr--tG~~~a~~~~gv~PDivt~ 282 (442)
T PRK13360 211 HDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKH------GILLIFDEVITGFGR--LGAPFAAQYFGVTPDLLTC 282 (442)
T ss_pred cCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCC--CccchhhhhcCCCCceeee
Confidence 34566776666666677777 99999999999 999999999965422 0000001111113576654
Q ss_pred cCCcCCCCC-cCeeEEEEeC
Q 018437 274 SGHKYGLVY-AGVGWVVWRT 292 (356)
Q Consensus 274 ~~hK~l~~P-~g~g~l~~~~ 292 (356)
-|.+.+. ..+|.++.++
T Consensus 283 --gK~l~gG~~P~gav~~~~ 300 (442)
T PRK13360 283 --AKGLTNGAIPMGAVFVSS 300 (442)
T ss_pred --eeccccCccceEEEEEcH
Confidence 5876543 3466676654
No 334
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=98.70 E-value=1.3e-06 Score=86.25 Aligned_cols=189 Identities=14% Similarity=0.010 Sum_probs=112.5
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.++..... .. ....+.++.+.+.+.+.. . ....++++||||+..|++.+|..
T Consensus 116 ~~p~v~~av~~ql~~~~~~--~~--~~~~~~~lAe~l~~~~p~-~-----~~v~f~~SGsEA~e~AlklAR~~------- 178 (474)
T PLN02482 116 ADDEVLAALAETMKKGTSF--GA--PCLLENVLAEMVIDAVPS-V-----EMVRFVNSGTEACMGVLRLARAY------- 178 (474)
T ss_pred CCHHHHHHHHHHHhhCCCC--CC--CCHHHHHHHHHHHHhCCC-C-----CEEEEeCChHHHHHHHHHHHHHh-------
Confidence 4578888888877643221 11 234556777788887632 1 24789999999999999999864
Q ss_pred cCCCCCCCeEEecC-CCcchHHHHHHhh-------------CCee----EEEEecCCccccCHHHHHHHHhh---CceEE
Q 018437 148 QGKPYDKPNIVTGA-NVQVCWEKFARYF-------------EVEL----KEVKLEEGYYVMNPVKAVELVDE---NTICV 206 (356)
Q Consensus 148 ~g~~~~~~~vi~s~-~~h~s~~~~~~~~-------------G~~v----~~v~~~~~~~~~d~~~L~~~i~~---~~~~v 206 (356)
.| +++|+.-. ..|-......... |... ..+.+. + -|+++|++.+.+ +..+|
T Consensus 179 tg----r~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~-nd~~~l~~~l~~~~~~iAav 250 (474)
T PLN02482 179 TG----REKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAP---Y-NDLEAVKKLFEANKGEIAAV 250 (474)
T ss_pred cC----CCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEec---C-CChHHHHHHHHhCCCceEEE
Confidence 11 35566543 3443221111110 1100 001111 1 178899988863 45566
Q ss_pred EEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCC
Q 018437 207 AAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY 282 (356)
Q Consensus 207 ~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P 282 (356)
++--.....|.+.| +++|.++|++| |+++++|+++.|+-....... ..+.+ ..|.+++ -|.+++.
T Consensus 251 I~Epv~g~~G~i~p~~~fl~~lr~lc~~~------g~lLI~DEV~tGfR~g~~ga~--~~~gv-~PDi~t~--gK~lggG 319 (474)
T PLN02482 251 ILEPVVGNSGFIVPKKEFLEGLREITKEN------GALLVFDEVMTGFRIAYGGAQ--EYFGI-TPDLTTL--GKVIGGG 319 (474)
T ss_pred EECCCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCeecCcchHh--HHhCC-CCCEEEe--cchhhCC
Confidence 66665566676654 56899999999 999999999876422110000 01111 3576654 6887766
Q ss_pred cCeeEEEEeC
Q 018437 283 AGVGWVVWRT 292 (356)
Q Consensus 283 ~g~g~l~~~~ 292 (356)
..+|.++.++
T Consensus 320 ~Pigav~g~~ 329 (474)
T PLN02482 320 LPVGAYGGRR 329 (474)
T ss_pred CceEEEEEcH
Confidence 7788887654
No 335
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.69 E-value=2.3e-06 Score=83.58 Aligned_cols=198 Identities=13% Similarity=-0.039 Sum_probs=114.9
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.+++..... ......+.+.++.+.+.+++.... .....++++||||+..|++.++..
T Consensus 49 h~~p~v~~a~~~ql~~~~~~~-~~~~~~~~~~~la~~l~~~~p~~~----~~~v~f~~sGseA~e~AlklAr~~------ 117 (420)
T TIGR00700 49 HSHPRVVDAVRTQVAEFTHTC-FMVTPYEGYVALAEKLNRIAPGSG----PKKSVFFNSGAEAVENAVKIARSY------ 117 (420)
T ss_pred CCCHHHHHHHHHHHHhccCcc-ccccCChHHHHHHHHHHHhCCCCC----CCEEEEeCCcHHHHHHHHHHHHHh------
Confidence 345788888887776432111 110112223356666777653211 124789999999999999998764
Q ss_pred hcCCCCCCCeEEecC-CCcchHHHHHHhhC--------C-----eeEEEEecCC----------ccccCHHHHHHHHh--
Q 018437 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYFE--------V-----ELKEVKLEEG----------YYVMNPVKAVELVD-- 200 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~-~~h~s~~~~~~~~G--------~-----~v~~v~~~~~----------~~~~d~~~L~~~i~-- 200 (356)
.| +++|+.-. ..|-...-+....| . ++..+|.... .+.-+++.+++.+.
T Consensus 118 -tg----r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (420)
T TIGR00700 118 -TG----RPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVID 192 (420)
T ss_pred -cC----CCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhh
Confidence 11 34555444 44443322232211 1 1344444210 01112566777663
Q ss_pred ---hCceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc--CCCceEE
Q 018437 201 ---ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPLVKSI 271 (356)
Q Consensus 201 ---~~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~Ds~ 271 (356)
++..+|++.-....+|.+-+ +++|.++|++| ++++++|++|.++... .. .+.+. -...|.+
T Consensus 193 ~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~------gillI~DEV~tg~gr~---g~-~~a~~~~~~~pDi~ 262 (420)
T TIGR00700 193 VGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREH------GIVFIADEVQTGFART---GA-MFACEHEGPEPDLI 262 (420)
T ss_pred cCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEEecccCCccc---ch-hHHHhhcCCCCCEE
Confidence 34667777666666677644 89999999999 9999999999875331 10 11111 1135655
Q ss_pred EEcCCcCCCCCcCeeEEEEeC
Q 018437 272 NVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 272 ~~~~hK~l~~P~g~g~l~~~~ 292 (356)
+ .-|.+.+.+.+|+++.++
T Consensus 263 ~--lsK~l~~G~pig~v~~~~ 281 (420)
T TIGR00700 263 T--TAKSLADGLPLSGVTGRA 281 (420)
T ss_pred E--eeccccCCcceEEEEecH
Confidence 5 568877778889998764
No 336
>PRK06105 aminotransferase; Provisional
Probab=98.68 E-value=3.2e-06 Score=83.46 Aligned_cols=204 Identities=11% Similarity=-0.029 Sum_probs=113.7
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++........+......+.++.+.+.+++..+. ....++++|+||+..|++.++..... +
T Consensus 64 h~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGseAve~AlKlar~~~~~-~- 136 (460)
T PRK06105 64 FSEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVPM-----SKVFFTNSGSEANDTVVKLVWYYNNA-L- 136 (460)
T ss_pred CCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCcHHHHHHHHHHHHHHHHh-c-
Confidence 3457888888887764322111111223444566777888764321 24789999999999999998754211 1
Q ss_pred hcCCCCCCCeEEe-cCCCcchHHHHHHhhCC------------eeEEEEecCCccc-------------cCHHHHHHHHh
Q 018437 147 EQGKPYDKPNIVT-GANVQVCWEKFARYFEV------------ELKEVKLEEGYYV-------------MNPVKAVELVD 200 (356)
Q Consensus 147 ~~g~~~~~~~vi~-s~~~h~s~~~~~~~~G~------------~v~~v~~~~~~~~-------------~d~~~L~~~i~ 200 (356)
|.. .+.+|+. ....|-...-+....|. .+..+|.... ++ -..+++++.+.
T Consensus 137 --g~t-~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~le~~~~ 212 (460)
T PRK06105 137 --GRP-EKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHY-YRFGLPGESEEAFATRLANELEALIL 212 (460)
T ss_pred --CCC-CCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcc-cccccCCCChHHHHHHHHHHHHHHHH
Confidence 111 1345554 34445443332222221 1233332210 11 12356777773
Q ss_pred ----hCceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccc-cccCCCCcccccCCCceEE
Q 018437 201 ----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-PFLYPDLEWDFRLPLVKSI 271 (356)
Q Consensus 201 ----~~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~-~~~~~~~~~~~~~~~~Ds~ 271 (356)
++..+|++--....-|.+.+ ++++.++|++| |+++++|+++.|+.. .-+......++ ..|.+
T Consensus 213 ~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~------~~llI~DEv~tG~GRtG~~f~~~~~~v---~PDi~ 283 (460)
T PRK06105 213 AEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKY------DILLVADEVICGFGRTGNMFGCETFGI---KPDIL 283 (460)
T ss_pred HcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCeEEEeccccCCCcCchhhhHHhcCC---CCCee
Confidence 24566666655555576656 89999999999 999999999965432 10000001111 35766
Q ss_pred EEcCCcCCCCC-cCeeEEEEeC
Q 018437 272 NVSGHKYGLVY-AGVGWVVWRT 292 (356)
Q Consensus 272 ~~~~hK~l~~P-~g~g~l~~~~ 292 (356)
++ -|.+.+. ...|.++.++
T Consensus 284 ~~--gK~lggG~~P~~av~~~~ 303 (460)
T PRK06105 284 VM--SKQLSSSYQPLSAVLMNE 303 (460)
T ss_pred ee--ecccccCcccceEEEEcH
Confidence 64 4876654 2567777764
No 337
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=98.68 E-value=3.3e-06 Score=82.79 Aligned_cols=193 Identities=10% Similarity=-0.023 Sum_probs=114.1
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.+......... ...+...++.+.+++++..+. ....++++||||+..|++.+|....+
T Consensus 91 h~hp~v~~Av~~ql~~l~~~~~~--~~~~~~~~lAe~L~~~~p~~~-----~~v~f~~SGsEA~e~AlklAr~~t~~--- 160 (442)
T TIGR03372 91 HRNPNVIAAVENQLAKQPLHSQE--LLDPLRALLAKTLAALTPGKL-----KYSFFCNSGTESVEAALKLAKAYQSP--- 160 (442)
T ss_pred CCCHHHHHHHHHHHHhCCCcccc--cCCHHHHHHHHHHHHhCCCCc-----CEEEEeCCchHHHHHHHHHHHHHHhh---
Confidence 44578888888776542222111 112334466677777764321 23789999999999999999875311
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHHhhCC------------eeEEEEecCCccccCHHHHHHHHh------hCceEEE
Q 018437 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEV------------ELKEVKLEEGYYVMNPVKAVELVD------ENTICVA 207 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~-~h~s~~~~~~~~G~------------~v~~v~~~~~~~~~d~~~L~~~i~------~~~~~v~ 207 (356)
.| +.+|+.... .|-...-+....+- .+..+|.+ |.+.+++.++ +++.+|+
T Consensus 161 -~g----r~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~------d~~~~~~~l~~~~~~~~~vAavI 229 (442)
T TIGR03372 161 -RG----KFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFG------DIEAMLKALNECKKTGDDVAAII 229 (442)
T ss_pred -cC----CcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCC------CHHHHHHHHHHHhcCCCcEEEEE
Confidence 11 345665554 44433333322121 12333322 5667777664 2456677
Q ss_pred EecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc--CCCceEEEEcCCcCCCC
Q 018437 208 AILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPLVKSINVSGHKYGLV 281 (356)
Q Consensus 208 ~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~Ds~~~~~hK~l~~ 281 (356)
+-.....-|.+.| ++++.++|++| |+++++|+++.|+... .. -+-+. --..|.++ .-|.+++
T Consensus 230 vEpv~g~gG~~~p~~~yl~~l~~lc~~~------g~llI~DEV~tG~GRt---G~-~~a~e~~gv~PDivt--~gK~lg~ 297 (442)
T TIGR03372 230 LEPIQGEGGVILPPEGYLPAVRALCDEF------GALLILDEVQTGMGRT---GK-MFACEHEGVQPDILC--LAKALGG 297 (442)
T ss_pred EeCccCCCCcccCCHHHHHHHHHHHHHc------CCEEEEeecccCCCcc---cc-chhhhhcCCCCCeee--ehhhhcC
Confidence 6666666677777 99999999999 9999999999764221 10 01111 11357666 4688765
Q ss_pred C-cCeeEEEEeC
Q 018437 282 Y-AGVGWVVWRT 292 (356)
Q Consensus 282 P-~g~g~l~~~~ 292 (356)
. ..+|.++.++
T Consensus 298 G~~Pigavv~~~ 309 (442)
T TIGR03372 298 GVMPIGATIATE 309 (442)
T ss_pred CcccceEEEecH
Confidence 5 3567777664
No 338
>PRK06062 hypothetical protein; Provisional
Probab=98.68 E-value=3.1e-06 Score=83.33 Aligned_cols=197 Identities=10% Similarity=-0.019 Sum_probs=115.0
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++........+ ..+...++.+.+.++...+. ..+.++++||||+..|++.+|...
T Consensus 69 h~~p~v~~Ai~~q~~~~~~~~~~~--~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGsEAve~AlklAr~~t----- 136 (451)
T PRK06062 69 HQHPKVVAAIQEQAARLCTVAPAH--ANDARSEAARLIAERAPGDL-----SKVFFTNGGADANEHAVRMARLHT----- 136 (451)
T ss_pred CCCHHHHHHHHHHHHhcCCcCCcc--CCHHHHHHHHHHHHhCCCCC-----CEEEEcCChHHHHHHHHHHHHHhh-----
Confidence 345788888887776432211111 23334466677777764221 247899999999999999997641
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHHhhCC-----------eeEEEEecCCccc------cC-------HHHHHHHHh-
Q 018437 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEV-----------ELKEVKLEEGYYV------MN-------PVKAVELVD- 200 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~-~h~s~~~~~~~~G~-----------~v~~v~~~~~~~~------~d-------~~~L~~~i~- 200 (356)
| +.+|+.-.. .|-...-+....|. ++..++... .++ -| ++.|++.++
T Consensus 137 --g----r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~le~~l~~ 209 (451)
T PRK06062 137 --G----RPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPF-LYRSEFHATTEEEECERALAHLERVIEL 209 (451)
T ss_pred --C----CceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCC-ccccccCCCChHHHHHHHHHHHHHHHHh
Confidence 1 345665544 34333333322221 123333221 011 12 577888885
Q ss_pred ---hCceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEE
Q 018437 201 ---ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINV 273 (356)
Q Consensus 201 ---~~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~ 273 (356)
++..+|++--....-|.+.| +++|.++|+++ |+++|+|+++.|+... ..-...+..--..|.+++
T Consensus 210 ~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~------g~lLI~DEV~tGfGRt--G~~~a~~~~gv~PDi~t~ 281 (451)
T PRK06062 210 EGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRH------GIVLIADEVMAGFGRT--GKWFAIEHFGVVPDLITF 281 (451)
T ss_pred cCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHc------CCEEEeeccccCCCcC--cHHHHHHhcCCCCCeeee
Confidence 23566766665555677777 99999999999 9999999999874321 000000101114576664
Q ss_pred cCCcCCCCCc-CeeEEEEeC
Q 018437 274 SGHKYGLVYA-GVGWVVWRT 292 (356)
Q Consensus 274 ~~hK~l~~P~-g~g~l~~~~ 292 (356)
-|.+.+.+ .+|.++.++
T Consensus 282 --gK~lggG~~Pigav~~~~ 299 (451)
T PRK06062 282 --AKGVNSGYVPLGGVAISE 299 (451)
T ss_pred --chhhhcCCcCcEEEEEcH
Confidence 68877654 567777765
No 339
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=98.67 E-value=7.7e-06 Score=79.98 Aligned_cols=198 Identities=12% Similarity=-0.002 Sum_probs=112.8
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++...... ......+...++.+.+.+++.-+. .....++++||||+..|++.++..
T Consensus 56 h~~p~v~~ai~~ql~~l~~~~-~~~~~~~~~~~la~~l~~~~p~~~----~~~v~f~~SGseA~e~AlklAr~~------ 124 (425)
T PRK07495 56 HRHPRVIAAVKAQLDRFTHTC-HQVVPYENYVRLAERLNALVPGDF----AKKTIFVTTGAEAVENAVKIARAA------ 124 (425)
T ss_pred CCCHHHHHHHHHHHhhccCcc-cCccCCHHHHHHHHHHHHhCCCCC----CCEEEECCchHHHHHHHHHHHHHh------
Confidence 445788888887776432111 111112334456667777764221 024789999999999999998764
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHHhhC-------------CeeEEEEecCCccccC----HHHHHHHHh-----hCc
Q 018437 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFE-------------VELKEVKLEEGYYVMN----PVKAVELVD-----ENT 203 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~-~h~s~~~~~~~~G-------------~~v~~v~~~~~~~~~d----~~~L~~~i~-----~~~ 203 (356)
.| +++|+.-.. .|-...-+....| -.+..+|.+.....++ ++++++.+. ++.
T Consensus 125 -tg----r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~i 199 (425)
T PRK07495 125 -TG----RSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRV 199 (425)
T ss_pred -hC----CCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCce
Confidence 11 345665443 3433222211111 1245566542111122 445577664 245
Q ss_pred eEEEEecCCCcccccC----CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc--CCCceEEEEcCCc
Q 018437 204 ICVAAILGSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPLVKSINVSGHK 277 (356)
Q Consensus 204 ~~v~~~~~~~~tG~~~----~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~Ds~~~~~hK 277 (356)
.+|++.-.....|.+. -+++|.++|++| |+++++|+++.++.. .... +.+. --..|.+++ -|
T Consensus 200 aavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~------g~llI~DEv~tG~gr---~G~~-~a~~~~gv~pDi~tl--sK 267 (425)
T PRK07495 200 AAIIIEPVQGEGGFYPAPAAFMKALRELCDQH------GILLIADEVQTGFAR---TGKL-FAMEHHEVAADLTTM--AK 267 (425)
T ss_pred EEEEECCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhcCCc---CCCc-eeecccCCCCCEEee--hh
Confidence 6666665555556442 378999999999 999999999987432 1111 1111 113465554 58
Q ss_pred CCCCCcCeeEEEEeC
Q 018437 278 YGLVYAGVGWVVWRT 292 (356)
Q Consensus 278 ~l~~P~g~g~l~~~~ 292 (356)
.+.+...+|+++.++
T Consensus 268 ~l~~G~pigav~~~~ 282 (425)
T PRK07495 268 GLAGGFPLAAVTGRA 282 (425)
T ss_pred hhcCCccceEEEEcH
Confidence 776666788888764
No 340
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.67 E-value=4.9e-06 Score=78.95 Aligned_cols=204 Identities=13% Similarity=-0.040 Sum_probs=117.0
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.++....... .........++.+++.++++-.. ....++++|++|+..|++.++..+.+.. .
T Consensus 33 ~~p~i~~ai~~~~~~~~~~~~-~~~~~~~~~~la~~L~~~~p~~~-----~~v~f~~sGseAve~Alkla~~~~~~~~-~ 105 (339)
T PF00202_consen 33 NHPEIAEAIAEQANKLNYVSF-SGFTHPEAAELAEKLAELFPGGL-----DRVFFANSGSEAVEAALKLARQYHNKRA-Y 105 (339)
T ss_dssp T-HHHHHHHHHHHHHCSSCST-TTSEEHHHHHHHHHHHHHSSTTE-----EEEEEESSHHHHHHHHHHHHHHHHHHTH-H
T ss_pred CccccchhHHHHhhhcccccc-cceeccchhhhhhhhhhcccccc-----ceeeeccCchHHHHHHHHHhhccccccc-c
Confidence 347888888877764322221 11122334467777888883321 3478999999999999999984433211 1
Q ss_pred cCCCCCCCeEEecCCC-cchHHHHHHhhC------------CeeEEEEecCCccc-----cCHHHHHHHH----hhCceE
Q 018437 148 QGKPYDKPNIVTGANV-QVCWEKFARYFE------------VELKEVKLEEGYYV-----MNPVKAVELV----DENTIC 205 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~-h~s~~~~~~~~G------------~~v~~v~~~~~~~~-----~d~~~L~~~i----~~~~~~ 205 (356)
.+ +.+|+.-..+ |-...-++...+ -.+..+|.+.. .. -..+.+++.+ .++..+
T Consensus 106 ~~----r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~iaa 180 (339)
T PF00202_consen 106 TG----RRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDP-AADEEEQACLNALEELIAALNADEIAA 180 (339)
T ss_dssp HT----TTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCH-HHHHHHHHHHHHHHHHHHHHHGGGEEE
T ss_pred cC----CceEEEeeeeeeccCcccccccCCccccccccccccccccccCCcc-chhhhHHHHHHHHHHHHHhhcCCcEEE
Confidence 11 3566655444 432222222111 23567777531 11 1122233332 234566
Q ss_pred EEEecCCCccccc----CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCC
Q 018437 206 VAAILGSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLV 281 (356)
Q Consensus 206 v~~~~~~~~tG~~----~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~ 281 (356)
|++.-.....|.+ +-+++|.++|+++ |+++++|+++.|+.. ...-...+..-...|.++++ |.+.+
T Consensus 181 vivEPi~g~~G~~~~~~~~l~~l~~lc~~~------gillI~DEV~tG~gR--tG~~~a~~~~gv~PDiv~~g--K~l~g 250 (339)
T PF00202_consen 181 VIVEPIQGEGGMIPPPPEYLRELRELCREH------GILLIADEVQTGFGR--TGKFFASEHYGVDPDIVTFG--KGLGG 250 (339)
T ss_dssp EEEESSBTTTTSBEE-TTHHHHHHHHHHHT------T-EEEEEETTTTTTT--TSSSSGHHHHTSSSSEEEEE--GGGGT
T ss_pred EEEeccccccCccccccchhhehccccccc------ccceecccccccccc--cCCccceecccccCcccccc--cchhh
Confidence 6666655555654 2379999999999 999999999987533 11100111112246999886 88777
Q ss_pred CcCeeEEEEeCC
Q 018437 282 YAGVGWVVWRTK 293 (356)
Q Consensus 282 P~g~g~l~~~~~ 293 (356)
....|.++.+++
T Consensus 251 G~p~sav~~~~~ 262 (339)
T PF00202_consen 251 GLPISAVLGSEE 262 (339)
T ss_dssp TSSEEEEEEEHH
T ss_pred hhhcccccccch
Confidence 788899998753
No 341
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=98.67 E-value=4.6e-06 Score=80.75 Aligned_cols=232 Identities=12% Similarity=-0.046 Sum_probs=133.9
Q ss_pred CChHHHHHHHHHHhcc-cCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (356)
+.+|.+.+++.+-+.. +..+...... +...++.+.+.+++..+. .....++++|+|||-.|++.+|...
T Consensus 72 H~hP~Vv~Av~~q~~~~~h~~~~~~~~--e~~v~~ae~L~~~~p~~~----~~~~~f~~sGaeA~E~AiKiAr~~T---- 141 (447)
T COG0160 72 HNHPRVVEAVKRQLAKLNHTHTRDLYY--EPYVELAEKLTALAPGSG----LKKVFFGNSGAEAVEAAIKIARAYT---- 141 (447)
T ss_pred CCCHHHHHHHHHHHHHhhcccCCcccc--hhHHHHHHHHHHhCCccc----CCeEEecCCcHHHHHHHHHHHHHHh----
Confidence 3458888888765543 1111111111 223345555666654431 1337899999999999999998752
Q ss_pred HhcCCCCCCCeEEe-cCCCcchHHHHHHhhC-------------CeeEEEEecCC-c--c--------ccCHHHHHHHHh
Q 018437 146 KEQGKPYDKPNIVT-GANVQVCWEKFARYFE-------------VELKEVKLEEG-Y--Y--------VMNPVKAVELVD 200 (356)
Q Consensus 146 ~~~g~~~~~~~vi~-s~~~h~s~~~~~~~~G-------------~~v~~v~~~~~-~--~--------~~d~~~L~~~i~ 200 (356)
++..||. ....|-...-++.+.| ..|..+|.... . + .-..+.++..+.
T Consensus 142 -------gr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~ 214 (447)
T COG0160 142 -------GRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALF 214 (447)
T ss_pred -------CCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHH
Confidence 1345554 4455555444444332 22677776431 1 1 112344555453
Q ss_pred h------CceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc--CCCc
Q 018437 201 E------NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPLV 268 (356)
Q Consensus 201 ~------~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~ 268 (356)
+ ++.++++--....-|.+.| ++++.++|++| |+++|+|++|.|+... . .-+.+. ---.
T Consensus 215 ~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~------gillI~DEVQtG~GRT--G--~~fa~E~~gv~P 284 (447)
T COG0160 215 DLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREH------GILLIADEVQTGFGRT--G--KMFAFEHFGVEP 284 (447)
T ss_pred hhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCcc--c--cchhhhhcCCCC
Confidence 2 4678888888888787743 78999999999 9999999999886541 1 112222 1146
Q ss_pred eEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHH
Q 018437 269 KSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEE 339 (356)
Q Consensus 269 Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G 339 (356)
|.++++ |-+++....|.++.|.+ .. . |..+.. ..|+.|. +. ..++..++|+.+-.++
T Consensus 285 Divt~a--K~ig~G~Pl~avv~r~e-i~-~-------~~~g~~-~~Tf~GN-pv-a~Aaa~AvL~vie~e~ 341 (447)
T COG0160 285 DIVTLA--KSLGGGLPLSAVVGRAE-IM-D-------WPPGGH-GGTFGGN-PV-ACAAALAVLDVIEEEN 341 (447)
T ss_pred CEEEec--ccccCCCceeEEeccHH-hc-c-------cCCccc-CCCCCcC-HH-HHHHHHHHHHHHHHcc
Confidence 888754 87777778888887643 21 1 111111 1122222 23 3556667888776664
No 342
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=98.66 E-value=3.8e-06 Score=82.66 Aligned_cols=197 Identities=13% Similarity=0.022 Sum_probs=113.7
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++......... ...+.+.++.+.+++++.... ...+.++++|+||+..|++.+|...
T Consensus 58 H~~p~v~~Ai~~ql~~~~~~~~~~-~~~~~~~~lae~L~~~~p~~~----~~~v~f~~SGseA~e~AiklAr~~t----- 127 (445)
T PRK08593 58 HAPPRVVEAIKAQADKFIHYTPAY-MYHEPLVRLAKKLCELAPGDF----EKRVTFGLSGSDANDGIIKFARAYT----- 127 (445)
T ss_pred CCCHHHHHHHHHHHHhccCccccc-cCCHHHHHHHHHHHHhCCCCC----CCEEEECCchHHHHHHHHHHHHHhh-----
Confidence 345888888887776432211110 112344466677887764321 0247899999999999999987641
Q ss_pred hcCCCCCCCeEEecC-CCcchHHHHHHhhC-------------CeeEEEEecCCccc-----cC-------HHHHHHHHh
Q 018437 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYFE-------------VELKEVKLEEGYYV-----MN-------PVKAVELVD 200 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~-~~h~s~~~~~~~~G-------------~~v~~v~~~~~~~~-----~d-------~~~L~~~i~ 200 (356)
| +.+|+.-. ..|-...-++...+ -++..+|.... .+ .+ ++++++.+.
T Consensus 128 --g----r~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (445)
T PRK08593 128 --G----RPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDK-YRGMYEEPDANFVEEYLAPLKEMFE 200 (445)
T ss_pred --C----CCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCcc-ccccccCCcHHHHHHHHHHHHHHHH
Confidence 1 34565544 44544333332222 12444554321 11 11 244555443
Q ss_pred -----hCceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCC-cc-cccCCCce
Q 018437 201 -----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EW-DFRLPLVK 269 (356)
Q Consensus 201 -----~~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~-~~~~~~~D 269 (356)
+++.+|++.-.....|.+.| +++|.++|++| |+++++|+++.++... ... .. .+.+ ..|
T Consensus 201 ~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~------g~llI~DEv~tg~Grt---G~~~a~~~~gv-~pD 270 (445)
T PRK08593 201 KYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREH------GILFAVDDIQQGLGRT---GKWSSISHFNI-TPD 270 (445)
T ss_pred hhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhCCCcC---chHHHHHhcCC-CCC
Confidence 35667777776666677756 89999999999 9999999998664220 100 00 1111 346
Q ss_pred EEEEcCCcCCCCCcCeeEEEEeC
Q 018437 270 SINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 270 s~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
.++ .-|.+.+.+..|+++.++
T Consensus 271 i~t--~gK~l~~G~p~gav~~~~ 291 (445)
T PRK08593 271 LMS--FGKSLAGGMPMSAIVGRK 291 (445)
T ss_pred Eee--ecccccCCcccEEEEEcH
Confidence 665 458766556678887764
No 343
>PRK05965 hypothetical protein; Provisional
Probab=98.65 E-value=6.3e-06 Score=81.38 Aligned_cols=207 Identities=12% Similarity=0.002 Sum_probs=115.8
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++........+....+...++.+.+.+++..+. ....++++||||+..|++.+|..+..
T Consensus 62 h~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGSEAve~AlKlAr~~~~~--- 133 (459)
T PRK05965 62 YGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGSL-----NHVYFTLGGSDAVDSAVRFIRHYWNA--- 133 (459)
T ss_pred CCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCCc-----CEEEEeCChhHHHHHHHHHHHHHHHh---
Confidence 3458888888887764322111111122333456677777753221 24789999999999999999876421
Q ss_pred hcCCCCCCCeEEecC-CCcchHHHHHHhhCC------------eeEEEEecCC-c--cccC--------HHHHHHHHh--
Q 018437 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYFEV------------ELKEVKLEEG-Y--YVMN--------PVKAVELVD-- 200 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~-~~h~s~~~~~~~~G~------------~v~~v~~~~~-~--~~~d--------~~~L~~~i~-- 200 (356)
.|.. .+.+||.-. ..|-...-+....|. .+..+|.... . +.-| ++++++.+.
T Consensus 134 -~g~~-~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 211 (459)
T PRK05965 134 -TGRP-SKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAEL 211 (459)
T ss_pred -cCCC-CccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhc
Confidence 1211 134565444 444432222222111 1234443210 0 0113 256777775
Q ss_pred --hCceEEEEecCCCccccc----CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEc
Q 018437 201 --ENTICVAAILGSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVS 274 (356)
Q Consensus 201 --~~~~~v~~~~~~~~tG~~----~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~ 274 (356)
++..+|++.-.....|.+ +-+++|.++|++| |+++|+|+++.|+... ..-...+..--..|.+++
T Consensus 212 ~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~------gillI~DEV~tGfGRt--G~~~a~~~~gv~PDiv~~- 282 (459)
T PRK05965 212 GADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACREL------GILFVADEVITGFGRT--GPLFACEAEGVVPDLMTV- 282 (459)
T ss_pred CCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhccCccC--chhhhHhhcCCCCCeEEe-
Confidence 345667666555555654 3378999999999 9999999999875321 000001111113677775
Q ss_pred CCcCCCCCc-CeeEEEEeCC
Q 018437 275 GHKYGLVYA-GVGWVVWRTK 293 (356)
Q Consensus 275 ~hK~l~~P~-g~g~l~~~~~ 293 (356)
-|.+.+.+ ..|.++.+++
T Consensus 283 -gKgl~gG~~Pi~av~~~~~ 301 (459)
T PRK05965 283 -AKGLTSGYVPMGAVLMSDH 301 (459)
T ss_pred -chhhccCCcceeEEEEcHH
Confidence 48776664 6788887643
No 344
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.65 E-value=3.8e-07 Score=84.79 Aligned_cols=211 Identities=14% Similarity=0.072 Sum_probs=133.7
Q ss_pred HHHHhhhcCCCC-cccccccCC------CChHHHHHHHHHHhccc-CCCcccCcchHHHHHHHHHHHHHH-hCCCCCC--
Q 018437 46 INDELMLDGNPR-LNLASFVTT------WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHL-FNTPVAD-- 114 (356)
Q Consensus 46 ~~~~~~~~~~~~-~~l~~~~~~------~~~~~v~~~i~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l-~g~~~~~-- 114 (356)
+.+.+..+..|. .||+.++.- +.-+.|.++-....++- ...|-.-.+...+.++ ++++ ||.+.+.
T Consensus 16 L~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~----~~~llFG~d~~~l~ 91 (396)
T COG1448 16 LKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEA----VQKLLFGADSPALA 91 (396)
T ss_pred HHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHH----HHHHhcCCCcHHHH
Confidence 344444454444 465544322 12245555443333322 1223333355555555 4443 6655321
Q ss_pred CCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe-cCCccccCHH
Q 018437 115 DKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL-EEGYYVMNPV 193 (356)
Q Consensus 115 ~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~ 193 (356)
......+-|.|||.|+..+.-.+.+.. ....|.+|+|+|..........|+++...|. |.++..+|.+
T Consensus 92 ~~Rv~t~Qt~GGTGAL~~~A~fl~~~~-----------~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~ 160 (396)
T COG1448 92 EDRVATVQTLGGTGALRVAADFLARFF-----------PDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFD 160 (396)
T ss_pred hhhHhheecCCcchHHHHHHHHHHHhC-----------CCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHH
Confidence 123456889999999988876665431 1347999999999999999999999999997 5555679999
Q ss_pred HHHHHHhh---CceEEEEecCCCccccc---CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc---
Q 018437 194 KAVELVDE---NTICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--- 264 (356)
Q Consensus 194 ~L~~~i~~---~~~~v~~~~~~~~tG~~---~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--- 264 (356)
.+.+.+.+ +..++.=.+.+||||.- +.+++|.++.++. +..-++|-||-||.-..-.+ ...++
T Consensus 161 ~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r------~lip~~D~AYQGF~~GleeD--a~~lR~~a 232 (396)
T COG1448 161 GMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKER------GLIPFFDIAYQGFADGLEED--AYALRLFA 232 (396)
T ss_pred HHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc------CCeeeeehhhhhhccchHHH--HHHHHHHH
Confidence 98888864 34455566788999975 5678899999999 99999999998765431111 11111
Q ss_pred CCCc-eEEEEcCCcCC
Q 018437 265 LPLV-KSINVSGHKYG 279 (356)
Q Consensus 265 ~~~~-Ds~~~~~hK~l 279 (356)
..+. -.++.|+.|.+
T Consensus 233 ~~~~~~lva~S~SKnf 248 (396)
T COG1448 233 EVGPELLVASSFSKNF 248 (396)
T ss_pred HhCCcEEEEehhhhhh
Confidence 1122 46667788975
No 345
>PRK07481 hypothetical protein; Provisional
Probab=98.64 E-value=8.3e-06 Score=80.34 Aligned_cols=206 Identities=10% Similarity=0.028 Sum_probs=113.2
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.+................+.++.+.+.++++-+. .....++++||||+..|++.+|.....
T Consensus 58 h~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~----~~~v~f~~sGsEAve~AlklAr~~~~~--- 130 (449)
T PRK07481 58 HNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPEG----MRRVFFSSGGSDSVETALKLARQYWKV--- 130 (449)
T ss_pred CCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCCC----CCEEEEcCchHHHHHHHHHHHHHHHHh---
Confidence 3457888888877764322111101122344567777888764211 124789999999999999999876421
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHHhhC------------CeeEEEEecCC---ccc-cCHHH--------HHHHHh-
Q 018437 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFE------------VELKEVKLEEG---YYV-MNPVK--------AVELVD- 200 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~-~h~s~~~~~~~~G------------~~v~~v~~~~~---~~~-~d~~~--------L~~~i~- 200 (356)
.|.. .+.+|+.-.. .|-...-++...| -++..++.+.. .+. -|++. |++.+.
T Consensus 131 -~g~~-~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~ 208 (449)
T PRK07481 131 -RGQP-ERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAF 208 (449)
T ss_pred -cCCC-CCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHh
Confidence 1211 1345554444 4433222222111 12333432210 011 13433 344443
Q ss_pred ---hCceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEeccccccccc-ccCCCCcccccCCCceEEE
Q 018437 201 ---ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP-FLYPDLEWDFRLPLVKSIN 272 (356)
Q Consensus 201 ---~~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~-~~~~~~~~~~~~~~~Ds~~ 272 (356)
+++.+|++--.....|.+-+ ++++.++|+++ |+++|+|+++.|+... -+.....+++ ..|.++
T Consensus 209 ~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~------g~llI~DEV~tGfGRtG~~~a~~~~gv---~PDiv~ 279 (449)
T PRK07481 209 QGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRH------GILLIADEVVTGFGRTGSWFGSRGWGV---KPDIMC 279 (449)
T ss_pred cCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHc------CCEEEEeehhhCcCcCchhhHhhhcCC---CCCEEE
Confidence 34667776666555566543 89999999999 9999999998775321 0000001122 367777
Q ss_pred EcCCcCCCCCc-CeeEEEEeC
Q 018437 273 VSGHKYGLVYA-GVGWVVWRT 292 (356)
Q Consensus 273 ~~~hK~l~~P~-g~g~l~~~~ 292 (356)
+ -|.+.+.+ .+|.++.++
T Consensus 280 ~--gKgl~gG~~Pi~av~~~~ 298 (449)
T PRK07481 280 L--AKGITSGYVPLGATMVNA 298 (449)
T ss_pred E--eecccCCCcCceEEEEcH
Confidence 5 58776553 577887765
No 346
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=98.64 E-value=3.7e-06 Score=82.18 Aligned_cols=197 Identities=12% Similarity=-0.053 Sum_probs=113.1
Q ss_pred CChHHHHHHHHHHhcccCCC-cccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVD-MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~-~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (356)
+.+|.+.+++.+.++..... ...++ .....++.+.+.+++.... .....++++||||+..|++.++...
T Consensus 56 h~~p~v~~ai~~ql~~~~~~~~~~~~--~~~~~~la~~l~~~~p~~~----~~~~~f~~sGseA~e~AlklAr~~t---- 125 (421)
T PRK06777 56 HRHPKVVAAVRQQLDQFTHTAYQIVP--YASYVTLAERINALAPIDG----PAKTAFFTTGAEAVENAVKIARAYT---- 125 (421)
T ss_pred CCCHHHHHHHHHHHhhcccccccccC--ChHHHHHHHHHHHhCCCCC----CceEEEeCCcHHHHHHHHHHHHHhh----
Confidence 44578888888777643211 11111 2223355666777754321 1247889999999999999997641
Q ss_pred HhcCCCCCCCeEEecCC-CcchHHHHHHhhCC-------------eeEEEEecCCc----cccCHHHHHHHHh-----hC
Q 018437 146 KEQGKPYDKPNIVTGAN-VQVCWEKFARYFEV-------------ELKEVKLEEGY----YVMNPVKAVELVD-----EN 202 (356)
Q Consensus 146 ~~~g~~~~~~~vi~s~~-~h~s~~~~~~~~G~-------------~v~~v~~~~~~----~~~d~~~L~~~i~-----~~ 202 (356)
| +++|+.-.. .|-...-++...|. .+..+|..... ..-+++.+++.+. ++
T Consensus 126 ---g----r~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~ 198 (421)
T PRK06777 126 ---G----RPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQ 198 (421)
T ss_pred ---C----CCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCc
Confidence 1 345665443 44433333322221 12333332110 1123667888775 24
Q ss_pred ceEEEEecCCCccccc-CC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc--CCCceEEEEcCC
Q 018437 203 TICVAAILGSTLTGEF-ED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPLVKSINVSGH 276 (356)
Q Consensus 203 ~~~v~~~~~~~~tG~~-~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~Ds~~~~~h 276 (356)
..+|++.-.....|.. -| +++|.++|+++ |+++++|++|.++.. . .. .+.+. ....|.++ .-
T Consensus 199 iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEv~tg~gr--~-g~-~~~~~~~~~~pDiv~--~s 266 (421)
T PRK06777 199 VAAILLEPIQGEGGFNVAPPEFMSALRTLCDEH------GILLIADEVQTGFAR--T-GK-LFAMEYYDVKPDLIT--MA 266 (421)
T ss_pred eEEEEECCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCcc--C-Cc-hhhhhhcCCCCCEEe--ee
Confidence 5667666666666643 33 89999999999 999999999987432 1 11 11111 11356554 56
Q ss_pred cCCCCCcCeeEEEEeC
Q 018437 277 KYGLVYAGVGWVVWRT 292 (356)
Q Consensus 277 K~l~~P~g~g~l~~~~ 292 (356)
|.+.+.+.+|+++.++
T Consensus 267 K~l~~G~pigav~~~~ 282 (421)
T PRK06777 267 KSLGGGMPISAVVGRA 282 (421)
T ss_pred hhhcCCCceEEEEEcH
Confidence 8776667789988764
No 347
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=98.61 E-value=8.6e-06 Score=80.10 Aligned_cols=202 Identities=10% Similarity=0.036 Sum_probs=113.2
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++........ ....+...++.+.+.+++...... .....++++||||+..|++.++..
T Consensus 55 h~~p~i~~ai~~q~~~~~~~~~~-~~~~~~~~~lae~L~~~~p~~~~~--~~~~f~~~sGsEA~e~AlklAr~~------ 125 (442)
T TIGR00709 55 HNHPNMKQKILDYLQSGLPLHTL-DLTTPLKDAFIEALLNIIPKRKMD--YKLQFPGPSGADAVEAAIKLAKTY------ 125 (442)
T ss_pred CCCHHHHHHHHHHHHhccCcccc-ccCcHHHHHHHHHHHHhCCCcCCC--ccEEEeCCCHHHHHHHHHHHHHHh------
Confidence 44578888888777643211111 111234446667788876432100 012344589999999999999864
Q ss_pred hcCCCCCCCeEEecC-CCcchHHHHHHhhC------------CeeEEEEecCCcccc--------CH----HHHHHHHh-
Q 018437 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYFE------------VELKEVKLEEGYYVM--------NP----VKAVELVD- 200 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~-~~h~s~~~~~~~~G------------~~v~~v~~~~~~~~~--------d~----~~L~~~i~- 200 (356)
.| +.+|+.-. ..|-...-+....| .++..+|... ..+. +. +.+++.++
T Consensus 126 -tg----r~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (442)
T TIGR00709 126 -TG----RTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPH-EYRCPFGIGGEAGSNASIEYFENFIED 199 (442)
T ss_pred -cC----CCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCc-cccccccCCchhHHHHHHHHHHHHHHh
Confidence 11 34566544 44444333333222 1244444422 1121 11 22344443
Q ss_pred -----hCceEEEEecCCCccccc----CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEE
Q 018437 201 -----ENTICVAAILGSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSI 271 (356)
Q Consensus 201 -----~~~~~v~~~~~~~~tG~~----~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~ 271 (356)
+++.+|++.......|.+ +-+++|.++|++| |+++|+|+++.|+... ..-......-...|.+
T Consensus 200 ~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~------g~llI~DEV~tGfGRt--G~~~a~~~~gv~PDiv 271 (442)
T TIGR00709 200 VESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKH------DIKLILDEVQAGFGRS--GTMFAFEHAGIEPDFV 271 (442)
T ss_pred hccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCCC--CchhHHHHcCCCCcEE
Confidence 245667666666666655 3478999999999 9999999999875431 1000011011135777
Q ss_pred EEcCCcCCCCCcCeeEEEEeCC
Q 018437 272 NVSGHKYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 272 ~~~~hK~l~~P~g~g~l~~~~~ 293 (356)
++ -|.+.+.+.+|.++.+++
T Consensus 272 ~~--gK~l~~G~Pigav~~~~~ 291 (442)
T TIGR00709 272 VM--SKAVGGGLPLAVLLIAPE 291 (442)
T ss_pred EE--cccccCCcccEEEEEchH
Confidence 74 587666678899988654
No 348
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=98.61 E-value=1e-06 Score=81.95 Aligned_cols=179 Identities=13% Similarity=-0.020 Sum_probs=115.5
Q ss_pred hHHHHHHHHHHhcccCCCccc-------CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHH
Q 018437 69 EPECDKLVMASINKNYVDMDE-------YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~-------~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~ 141 (356)
+|.+.+++.+.++.+...... +.-...+|.+ +|+|-+-+. ..+-++.-.||-..+..+.+..
T Consensus 187 Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~e----LA~LHqK~a-------ALlFsSCfVANDstLftLak~l 255 (570)
T KOG1360|consen 187 HPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAE----LADLHQKEA-------ALLFSSCFVANDSTLFTLAKKL 255 (570)
T ss_pred ChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHH----HHHHhcCcc-------eeeeeeeeeccchHHHHHHHHC
Confidence 478999999999865332211 2233455555 888866653 2222333445555555554431
Q ss_pred HHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh----CceEEEEecCCCcccc
Q 018437 142 QQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NTICVAAILGSTLTGE 217 (356)
Q Consensus 142 ~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~----~~~~v~~~~~~~~tG~ 217 (356)
+ +-+|+.-+-.|.|.....+--+++ +.-..-+ |+++|++.++. .|++|.+-...+..|.
T Consensus 256 p-----------gcei~SD~gNHASMI~GIrns~v~--K~IFrHN----D~~hL~~lL~~~~~svPKivAFEtVhSM~Ga 318 (570)
T KOG1360|consen 256 P-----------GCEIFSDEGNHASMIQGIRNSRVP--KHIFRHN----DLDHLEQLLQSSPKSVPKIVAFETVHSMDGA 318 (570)
T ss_pred C-----------CcEEeccccchHHHHHHhhhcCCc--ceeeccC----CHHHHHHHHHhCCCCCCceEEEeeeeccCCC
Confidence 1 234444455688877766654443 2222222 88999999875 4789999999999999
Q ss_pred cCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccC-CCCcccccCCCceEEEEcCCcCCCC
Q 018437 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY-PDLEWDFRLPLVKSINVSGHKYGLV 281 (356)
Q Consensus 218 ~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~-~~~~~~~~~~~~Ds~~~~~hK~l~~ 281 (356)
+.||++|++++++| |..-.+|+++.-+++.--. .-...+--+..+|.++-...|.+++
T Consensus 319 vcpleelcDvah~y------GAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGc 377 (570)
T KOG1360|consen 319 VCPLEELCDVAHKY------GAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGC 377 (570)
T ss_pred cCCHHHHHHHHHHh------CceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccc
Confidence 99999999999999 9999999987655442100 0001122256899999888897654
No 349
>PRK07036 hypothetical protein; Provisional
Probab=98.60 E-value=9e-06 Score=80.40 Aligned_cols=205 Identities=14% Similarity=-0.003 Sum_probs=114.1
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++.............+.+.++.+.+.+++..+. ....++++||||+..|++.++..... +
T Consensus 67 h~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGseAve~AlklAr~~~~~-~- 139 (466)
T PRK07036 67 YGREEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPGDL-----NHVFLTTGGSTAVDSALRFVHYYFNV-R- 139 (466)
T ss_pred CCCHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCCchHHHHHHHHHHHHHHHh-c-
Confidence 3457888888877664211111100123344567777777753221 24789999999999999998764321 1
Q ss_pred hcCCCCCCCeEEecC-CCcchHHHHHHhhC------------CeeEEEEecCC---cccc--------CHHHHHHHHh--
Q 018437 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYFE------------VELKEVKLEEG---YYVM--------NPVKAVELVD-- 200 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~-~~h~s~~~~~~~~G------------~~v~~v~~~~~---~~~~--------d~~~L~~~i~-- 200 (356)
|.. .+.+|+.-. ..|-...-+....| ..+..+|.... ...+ .++.+++.+.
T Consensus 140 --g~t-~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 216 (466)
T PRK07036 140 --GRP-AKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSL 216 (466)
T ss_pred --CCC-CccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHc
Confidence 111 134565544 34433322222211 11344443210 0011 1244555554
Q ss_pred --hCceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEeccccccccc--ccCCCCcccccCCCceEEE
Q 018437 201 --ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP--FLYPDLEWDFRLPLVKSIN 272 (356)
Q Consensus 201 --~~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~--~~~~~~~~~~~~~~~Ds~~ 272 (356)
+++.+|++--.....|.+.| +++|.++|++| |+++|+|+++.|+... ++.-+..+.+ ..|.++
T Consensus 217 ~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~------g~llI~DEV~tGfGRtG~~~~~~~~~gv---~PDivt 287 (466)
T PRK07036 217 GADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRY------DILYISDEVVTGFGRLGHFFASEAVFGI---QPDIIT 287 (466)
T ss_pred CCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeechhCCCcCchhhhhhhhcCC---CCCEEE
Confidence 34567777766666677655 89999999999 9999999999765321 0000001121 357776
Q ss_pred EcCCcCCCCCc-CeeEEEEeC
Q 018437 273 VSGHKYGLVYA-GVGWVVWRT 292 (356)
Q Consensus 273 ~~~hK~l~~P~-g~g~l~~~~ 292 (356)
+ -|.+.+.+ .+|.++.++
T Consensus 288 ~--gK~l~gG~~Pi~av~~~~ 306 (466)
T PRK07036 288 F--AKGLTSGYQPLGAVIISE 306 (466)
T ss_pred E--ccccccCccccEEEEEcH
Confidence 5 58776653 578887764
No 350
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.56 E-value=2.5e-06 Score=78.57 Aligned_cols=236 Identities=16% Similarity=0.198 Sum_probs=135.8
Q ss_pred cCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHH
Q 018437 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE 168 (356)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~ 168 (356)
.+.+...|.+ .+.+.||+.- .+-|.-|-.|-..-+-.++.+ |....+.+.++++..|....
T Consensus 77 gsrs~~~L~~----avkdifGfq~-------~iPthQGRgAE~Il~~i~ik~--------~~~~pg~~~~~~sN~~FdTT 137 (471)
T COG3033 77 GSRSYYALAD----AVKDIFGFQY-------TIPTHQGRGAENILIPILIKK--------GEQEPGSKMVAFSNYHFDTT 137 (471)
T ss_pred ccccHHHHHH----HHHHhcCcee-------eeeccCCccHHHHHHHHHhhh--------ccccCCccccccccceecch
Confidence 3444444544 4777888864 455665554443333333332 11112346667777776543
Q ss_pred -HHHHhhCCeeEEEEecCC---------ccccCHHHHHHHHhh----CceEEEEecCCCcccc----cCCHHHHHHHHHH
Q 018437 169 -KFARYFEVELKEVKLEEG---------YYVMNPVKAVELVDE----NTICVAAILGSTLTGE----FEDVKLLHDLLTK 230 (356)
Q Consensus 169 -~~~~~~G~~v~~v~~~~~---------~~~~d~~~L~~~i~~----~~~~v~~~~~~~~tG~----~~~i~~I~~i~~~ 230 (356)
--.+..|+.++-+++++. .|.+|++.|++.|++ +...|+++--+|.-|. +.+++++.++|++
T Consensus 138 r~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~k 217 (471)
T COG3033 138 RGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKK 217 (471)
T ss_pred hHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHH
Confidence 334466888887777531 378999999999985 4556666655555453 3789999999999
Q ss_pred hhhccCCCCcEEEecccc---cccccccCCCC-ccccc------CCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCc--c
Q 018437 231 KNEETGWDTPIHVDAASG---GFIAPFLYPDL-EWDFR------LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP--D 298 (356)
Q Consensus 231 ~~~~~~~~~~l~vD~a~~---~~~~~~~~~~~-~~~~~------~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~--~ 298 (356)
| +++++.|+|-- .++.-.-.+.. .+.+. ...+|.++.|+.|=++++.| |+++++|+..+. .
T Consensus 218 y------~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmG-Gfl~~~D~~~fDvy~ 290 (471)
T COG3033 218 Y------DIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMG-GFLCFKDDSFFDVYE 290 (471)
T ss_pred c------CCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceeccc-cEEEecCccHHHHHH
Confidence 9 99999998731 11110000111 11111 34699999999999989998 999999875421 1
Q ss_pred ccccccCCCCCCCCCccccCCCChhHHHHHHHHHH-HhCHHHHHHHHHHHHhccCcc
Q 018437 299 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI-RLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~-~lg~~G~~~~~~~~~~~a~~l 354 (356)
... ...-+..+.+++ |.-.+...-++...|. ....+-++.+++++..++..|
T Consensus 291 ~~~-~~~V~~eG~~tY---Ggl~GrdmealAvGL~e~~~~~yl~~Rv~Qv~YL~~~l 343 (471)
T COG3033 291 ECR-TLVVVQEGFPTY---GGLAGRDMEALAVGLREGVNFDYLAHRVAQVQYLADGL 343 (471)
T ss_pred HHH-hheEeecccccc---CcccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 100 000111111222 2223333333333333 234556777777777776654
No 351
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.56 E-value=3.6e-06 Score=77.99 Aligned_cols=223 Identities=16% Similarity=0.066 Sum_probs=134.4
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeC-ChhHHHHHHHHHHHHHHHHHHHhcCCCCCCC--eEEecCCCcch
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTV-GSSEAIMLAGLAFKRKWQQKRKEQGKPYDKP--NIVTGANVQVC 166 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~-Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~--~vi~s~~~h~s 166 (356)
+.....+-.++.+.+++++++|.+ +.+.+.. |+|....++.+.+... +. .|....-+..+
T Consensus 45 sk~~~~v~~~a~~~lreLl~iPd~----Y~VlflqGGat~qf~~~p~nLl~~-------------~~~~yv~~g~Ws~~a 107 (365)
T COG1932 45 SKEFKNVLEEAEKDLRELLNIPDD----YKVLFLQGGATGQFAMAPMNLLGK-------------RGTDYVDTGAWSEFA 107 (365)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCC----ceEEEEcCccHHHHHHHHHhhhcc-------------cCceeEeeeehhHhH
Confidence 345667777889999999999974 4565655 5667777777766542 12 24444444444
Q ss_pred HHHHHHhhCC--eeEEEEecC--CccccCHHHHHHHHhhCceEEEEecCCCcccccCC-HHHHHHHHHHhhhccCCCCcE
Q 018437 167 WEKFARYFEV--ELKEVKLEE--GYYVMNPVKAVELVDENTICVAAILGSTLTGEFED-VKLLHDLLTKKNEETGWDTPI 241 (356)
Q Consensus 167 ~~~~~~~~G~--~v~~v~~~~--~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~-i~~I~~i~~~~~~~~~~~~~l 241 (356)
+..+-+ ++- .+..+...+ .....|++... +.++...|..|+..|.+|+--+ ...+. .+.++
T Consensus 108 ~~eA~~-~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeTi~Gv~v~~~p~~~-----------~~~~~ 173 (365)
T COG1932 108 IKEAKK-VGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNETISGVEVPELPDIG-----------SDGLL 173 (365)
T ss_pred HHHHHH-hcccccccccceeccCccCCCChhhcc--cCCCccEEEEecCCcccceEccCCCCCC-----------CCceE
Confidence 444433 343 222222111 11334444433 4444556889999999998644 11111 03789
Q ss_pred EEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccc----cccccCCCCCCCCCcccc
Q 018437 242 HVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDE----LVFHINYLGSDQPTFTLN 317 (356)
Q Consensus 242 ~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 317 (356)
++|+..+.+.. ++|+ ...|.+.++.+|.+ +|-|.+++++|++ .+.+. ++.-..|..+.. .-.+.
T Consensus 174 v~D~SS~ilsr-------~iDv--sk~dviyagaQKnl-GpaGltvvIvr~~-~l~r~~~~~~P~if~y~~~~~-~~s~y 241 (365)
T COG1932 174 VADASSAILSR-------PIDV--SKYDVIYAGAQKNL-GPAGLTVVIVRPD-LLERAESYTLPSIFDYLTHAD-NGSMY 241 (365)
T ss_pred EEecccHHhcC-------CCCh--hHcceEEEehhhcc-CccceEEEEEcHH-HHhcccccCCchHhhchhhhc-cCCcc
Confidence 99998776444 2444 47899999999998 8999999999865 32221 111123333322 12234
Q ss_pred CCCChhHHHHHHHHHHHhCHH-HHHHHHHHHHhccCccc
Q 018437 318 FSKGSSQIIAQYYQFIRLGFE-EITFTFISSLKVCPFLV 355 (356)
Q Consensus 318 ~tr~~~~~~~~~~~l~~lg~~-G~~~~~~~~~~~a~~l~ 355 (356)
.|++.....-+-..++.+-.. |++++.++..+.|+.|.
T Consensus 242 NTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY 280 (365)
T COG1932 242 NTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLY 280 (365)
T ss_pred CCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 677776555555677766444 68889888888877653
No 352
>PRK07046 aminotransferase; Validated
Probab=98.54 E-value=8.7e-06 Score=80.20 Aligned_cols=188 Identities=10% Similarity=-0.030 Sum_probs=113.4
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.++..... .. ..+.+.++.+.+.++++++ ...++++||||+..|++.+|..
T Consensus 92 ~~p~i~~Av~~q~~~~~~~--~~--~~~~~~~lAe~l~~~~~~~-------~v~F~nSGtEA~e~AlrlAR~~------- 153 (453)
T PRK07046 92 SPAPVARALAEQARRGLTT--ML--PSEDAAWVGEELARRFGLP-------YWQVATTATDANRFVLRWARAV------- 153 (453)
T ss_pred CCHHHHHHHHHHHHhCCCC--CC--CCHHHHHHHHHHHHHhCCC-------EEEEECCHHHHHHHHHHHHHHh-------
Confidence 3578888888877643221 11 2345667778888887654 2789999999999999999864
Q ss_pred cCCCCCCCeEEecC-CCcchHHHHHHh------------hCCee----EEEEecCCccccCHHHHHHHHhh-CceEEEEe
Q 018437 148 QGKPYDKPNIVTGA-NVQVCWEKFARY------------FEVEL----KEVKLEEGYYVMNPVKAVELVDE-NTICVAAI 209 (356)
Q Consensus 148 ~g~~~~~~~vi~s~-~~h~s~~~~~~~------------~G~~v----~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~ 209 (356)
.| +++|+.-. ..|-........ .|... ..+.+. + -|++.+++.+.. +..+|++-
T Consensus 154 TG----r~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~-nd~~~l~~~l~~~~vAavi~E 225 (453)
T PRK07046 154 TG----RPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE---F-NDLAALEAALADGDVAAVLAE 225 (453)
T ss_pred hC----CCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC---C-CCHHHHHHHhCCCCeEEEEEC
Confidence 11 45566544 344332111110 01100 001111 1 178999998853 45666665
Q ss_pred cCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCe
Q 018437 210 LGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV 285 (356)
Q Consensus 210 ~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~ 285 (356)
-.....|.+-| ++++.++|+++ |+++|+|+++. +-..+-.....+++ ..|.+++ -|.+++...+
T Consensus 226 Pi~g~~G~~~p~~~fl~~lr~lc~~~------g~llI~DEV~t-fr~g~Gg~~~~~gv---~PDi~t~--gK~lggG~Pi 293 (453)
T PRK07046 226 PAMTNIGMVLPEPGFHEALRELTRRY------GTLLVIDETHT-ISSGPGGYTRAHGL---EPDFLVV--GKPIAGGVPC 293 (453)
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHh------CCEEEEEcccc-CccCCcchhHHhCC---Cccceee--hhhhcCCCcc
Confidence 55545565533 79999999999 99999999985 11110010001122 3577764 6887777888
Q ss_pred eEEEEeCC
Q 018437 286 GWVVWRTK 293 (356)
Q Consensus 286 g~l~~~~~ 293 (356)
|.++.+++
T Consensus 294 ~av~g~~~ 301 (453)
T PRK07046 294 AVYGFSAE 301 (453)
T ss_pred eeeeehHH
Confidence 98887653
No 353
>PRK07480 putative aminotransferase; Validated
Probab=98.53 E-value=1.6e-05 Score=78.44 Aligned_cols=206 Identities=12% Similarity=-0.074 Sum_probs=113.1
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++........+......+.++.+.++++++.+. ....++++||||+..|++.+|..+..
T Consensus 66 h~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGseA~e~AlklAr~~~~~--- 137 (456)
T PRK07480 66 YGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPPGF-----NHVFFTNSGSEANDTVLRMVRHYWAL--- 137 (456)
T ss_pred CCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCCcHHHHHHHHHHHHHHHHh---
Confidence 3457888888877764322211111223444567777888764321 24789999999999999999875422
Q ss_pred hcCCCCCCCeEEecC-CCcchHHHHHHhhCC------------eeEEEEecCC-c--cccC--------HHHHHHHHh--
Q 018437 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYFEV------------ELKEVKLEEG-Y--YVMN--------PVKAVELVD-- 200 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~-~~h~s~~~~~~~~G~------------~v~~v~~~~~-~--~~~d--------~~~L~~~i~-- 200 (356)
.|.. .+.+|+.-. ..|-...-+....|. .+..++.... . ...+ ++.|++.+.
T Consensus 138 -~g~~-~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 215 (456)
T PRK07480 138 -KGKP-QKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILEL 215 (456)
T ss_pred -cCCC-CCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhc
Confidence 1111 134565544 334332222222111 1222332110 0 0011 356665553
Q ss_pred --hCceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEc
Q 018437 201 --ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVS 274 (356)
Q Consensus 201 --~~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~ 274 (356)
+++.+|++--.....|.+.+ +++|.++|++| |+++|+|+++.|+.. ...-...+..--..|.+++
T Consensus 216 ~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~------g~llI~DEV~tGfGR--tG~~~a~~~~gv~PDiv~~- 286 (456)
T PRK07480 216 GADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKY------DILLVADEVICGFGR--TGEWFGSQHFGIKPDLMTI- 286 (456)
T ss_pred CCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--CcchhhhhhcCCCCCeeee-
Confidence 34566776665555566655 89999999999 999999999976532 1100001111113576664
Q ss_pred CCcCCCCCc-CeeEEEEeC
Q 018437 275 GHKYGLVYA-GVGWVVWRT 292 (356)
Q Consensus 275 ~hK~l~~P~-g~g~l~~~~ 292 (356)
-|.+.+.+ .+|.++.++
T Consensus 287 -gK~l~gG~~Pi~av~~~~ 304 (456)
T PRK07480 287 -AKGLTSGYIPMGAVGVGD 304 (456)
T ss_pred -ehhhccCCccceEEEEcH
Confidence 58766543 467777764
No 354
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.53 E-value=8.9e-06 Score=80.16 Aligned_cols=206 Identities=13% Similarity=-0.018 Sum_probs=116.1
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++........ ....+...++.+.++++++... ....++++||||+..|++.++..+.. |
T Consensus 70 h~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~lAe~L~~~~p~~~-----~~v~f~~sGseAve~AlKlA~~~~~~-r- 141 (453)
T PRK06943 70 HANPRINAALKDQLDTLEHAMLA-GCTHEPAIELAERLAALTGGTL-----GHAFFASDGASAVEIALKMSFHAWRN-R- 141 (453)
T ss_pred CCCHHHHHHHHHHHHhcCCcccc-ccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCCHHHHHHHHHHHHHHHHH-h-
Confidence 34588888888777643221111 1112334466777777765331 24789999999999999999876432 1
Q ss_pred hcCCCCCCCeEEecCCC-cchHHHHHHhhC------------CeeEEEEecCCcc-----------ccCHHHHHHHHh--
Q 018437 147 EQGKPYDKPNIVTGANV-QVCWEKFARYFE------------VELKEVKLEEGYY-----------VMNPVKAVELVD-- 200 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~-h~s~~~~~~~~G------------~~v~~v~~~~~~~-----------~~d~~~L~~~i~-- 200 (356)
|.. .+.+||.-..+ |-...-+....| ..+..+|.....+ .-+++++++.+.
T Consensus 142 --g~~-~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 218 (453)
T PRK06943 142 --GRG-DKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAER 218 (453)
T ss_pred --CCC-CCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhC
Confidence 111 13456654444 433222222221 1233444321100 013467777775
Q ss_pred -hCceEEEEec-CCCccccc----CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEc
Q 018437 201 -ENTICVAAIL-GSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVS 274 (356)
Q Consensus 201 -~~~~~v~~~~-~~~~tG~~----~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~ 274 (356)
++..+|++.- .....|.+ +-++++.++|++| |+++|+|+++.|+... ..-...+..--..|.+++
T Consensus 219 ~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~------gillI~DEV~TG~GRt--G~~fa~~~~gv~PDivt~- 289 (453)
T PRK06943 219 AGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRY------GVHLIADEIAVGCGRT--GTFFACEQAGVWPDFLCL- 289 (453)
T ss_pred CCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHc------CCEEEeechhhCCCCC--cchhHHHhCCCCCCeEee-
Confidence 3455666554 24555654 2378999999999 9999999998775321 100000111114688886
Q ss_pred CCcCCCCCc-CeeEEEEeCC
Q 018437 275 GHKYGLVYA-GVGWVVWRTK 293 (356)
Q Consensus 275 ~hK~l~~P~-g~g~l~~~~~ 293 (356)
-|.+.+.+ .+|.++.+++
T Consensus 290 -gKgl~gG~~Pi~av~~~~e 308 (453)
T PRK06943 290 -SKGISGGYLPLSLVLSRDA 308 (453)
T ss_pred -ehhhccCcccceEEEEcHH
Confidence 58766663 6788887653
No 355
>PRK07678 aminotransferase; Validated
Probab=98.51 E-value=3.4e-05 Score=76.08 Aligned_cols=201 Identities=12% Similarity=-0.023 Sum_probs=115.0
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.+.........+ ..+.+.++.+.+.++++.. ....++++||||+..|++.+|.....
T Consensus 63 h~~p~v~~ai~~q~~~~~~~~~~~--~~~~~~~lae~l~~~~~~~------~~v~f~~sGseA~e~AlklAr~~t~~--- 131 (451)
T PRK07678 63 YGRKELAEAAYEQLKTLSYFPLTQ--SHEPAIKLAEKLNEWLGGE------YVIFFSNSGSEANETAFKIARQYHAQ--- 131 (451)
T ss_pred CCCHHHHHHHHHHHHhcCcccccc--CCHHHHHHHHHHHHhCCCC------CEEEEeCCcHHHHHHHHHHHHHHHHh---
Confidence 345788888877766432221111 1233446777788876543 24789999999999999999875421
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHHhhC------------CeeEEEEecCCcccc---------C---HHHHHHHHh-
Q 018437 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFE------------VELKEVKLEEGYYVM---------N---PVKAVELVD- 200 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~-~h~s~~~~~~~~G------------~~v~~v~~~~~~~~~---------d---~~~L~~~i~- 200 (356)
.|.+ .+.+|+.-.. .|-...-+....| -++..+|.... ++. | ++.+++.++
T Consensus 132 -~g~~-~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (451)
T PRK07678 132 -KGEP-HRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDC-YRMPGIESEDIYDLECVKEIDRVMTW 208 (451)
T ss_pred -cCCC-CCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCcc-ccccccCChHHHHHHHHHHHHHHHHh
Confidence 1211 1345665443 3433322222211 12344443211 111 1 233566664
Q ss_pred ---hCceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccc-c-ccCCCCcccccCCCceEE
Q 018437 201 ---ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-P-FLYPDLEWDFRLPLVKSI 271 (356)
Q Consensus 201 ---~~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~-~-~~~~~~~~~~~~~~~Ds~ 271 (356)
+++.+|++--....-|.+.| ++++.++|++| |+++|+|+++.|+.. . ++.-+ .+.+ ..|.+
T Consensus 209 ~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~------g~llI~DEV~tGfGRtG~~~~~~-~~gv---~PDiv 278 (451)
T PRK07678 209 ELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKH------GALLISDEVICGFGRTGKAFGFM-NYGV---KPDII 278 (451)
T ss_pred cCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHc------CCEEEEeehhhcCCcCchhHHHH-hcCC---CCCEE
Confidence 34666776655555566643 89999999999 999999999976532 1 00001 1222 46877
Q ss_pred EEcCCcCCCCC-cCeeEEEEeCC
Q 018437 272 NVSGHKYGLVY-AGVGWVVWRTK 293 (356)
Q Consensus 272 ~~~~hK~l~~P-~g~g~l~~~~~ 293 (356)
++ -|.+++. ..+|.++.+++
T Consensus 279 t~--gK~lggG~~Pi~av~~~~~ 299 (451)
T PRK07678 279 TM--AKGITSAYLPLSATAVKKE 299 (451)
T ss_pred Ee--ecccccCCcceeEEEEcHH
Confidence 75 5877665 36788888653
No 356
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=98.51 E-value=1.3e-06 Score=78.38 Aligned_cols=184 Identities=12% Similarity=-0.002 Sum_probs=128.2
Q ss_pred ChHHHHHHHHHHhcccCCCcccCc---chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q 018437 68 MEPECDKLVMASINKNYVDMDEYP---VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (356)
.+|++.++-..++.+....+.... ++..+-+.+...+|++-|-++ -++.+.+-.||.-++.+.+.+
T Consensus 82 shPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~rED-------~ilypscfdANag~feail~p---- 150 (417)
T KOG1359|consen 82 SHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGRED-------TILYPSCFDANAGAFEAILTP---- 150 (417)
T ss_pred CChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhCCCc-------eEEeccccccchHHHHHhcCh----
Confidence 347788877778776655554432 777888888888999877764 577777888888888877654
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh----CceEEEEecCCCcccccCC
Q 018437 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NTICVAAILGSTLTGEFED 220 (356)
Q Consensus 145 ~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~----~~~~v~~~~~~~~tG~~~~ 220 (356)
++-|+..+..|.|+....++.. . ...+|+..|+..+.+ +-++|+--..-+.-|-+.|
T Consensus 151 ---------edAvfSDeLNhASIIdGirLck---------r-y~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaP 211 (417)
T KOG1359|consen 151 ---------EDAVFSDELNHASIIDGIRLCK---------R-YRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAP 211 (417)
T ss_pred ---------hhhhhccccccchhhhhhHHHh---------h-hccchhHHHHHHHHHhhhheEEEEEecceeccCCCccc
Confidence 3456666788999887766643 2 367778778876653 3345554444556788999
Q ss_pred HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCCCCcCeeEE
Q 018437 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWV 288 (356)
Q Consensus 221 i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~P~g~g~l 288 (356)
+++|.+++++| |.++.+|++++-++..-...-..-.+. +..+|.+.....|.+++-.| |+.
T Consensus 212 l~ei~~La~kY------gaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G-Gyt 273 (417)
T KOG1359|consen 212 LEEISQLAKKY------GALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASG-GYT 273 (417)
T ss_pred HHHHHHHHHhc------CcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCC-CCc
Confidence 99999999999 999999999987665321111111222 45689888889998875443 443
No 357
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.50 E-value=1.5e-05 Score=78.65 Aligned_cols=205 Identities=15% Similarity=0.003 Sum_probs=115.0
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++.-...... ....+.+.++.+.+++++.... ....++++||||+..|++.++..+..+
T Consensus 72 h~~p~v~~Ai~~ql~~l~~~~~~-~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGseAve~AlklAr~~~~~~-- 143 (460)
T PRK06916 72 HQVPELDEAIREQLNKIAHSTLL-GLANVPSILLAEKLIEVVPEGL-----KKVFYSDSGATAVEIAIKMAFQYWQNK-- 143 (460)
T ss_pred CCCHHHHHHHHHHHHhCCCcccc-ccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCcHHHHHHHHHHHHHHHHhc--
Confidence 44688888888777642211111 1122344567777888764321 247899999999999999998754221
Q ss_pred hcCCCCCCCeEEecC-CCcchHHHHHHhhC------------CeeEEEEecCC-c----------cccCHHHHHHHHh--
Q 018437 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYFE------------VELKEVKLEEG-Y----------YVMNPVKAVELVD-- 200 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~-~~h~s~~~~~~~~G------------~~v~~v~~~~~-~----------~~~d~~~L~~~i~-- 200 (356)
|.. .+.+|+.-. ..|-...-+....| ..+..+|.... . ..-+++.+++.++
T Consensus 144 --g~t-gr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 220 (460)
T PRK06916 144 --GKP-KKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEK 220 (460)
T ss_pred --CCC-CCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhC
Confidence 111 134555444 44544333333222 12344443210 0 0123567777775
Q ss_pred -hCceEEEEec-CCCccccc----CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEc
Q 018437 201 -ENTICVAAIL-GSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVS 274 (356)
Q Consensus 201 -~~~~~v~~~~-~~~~tG~~----~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~ 274 (356)
++..+|++-- .....|.+ +-++++.++|+++ |+++|+|+++.|+.. ...-...+..--..|.+++
T Consensus 221 ~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~------g~llI~DEV~TG~GR--tG~~~a~~~~gv~PDiv~~- 291 (460)
T PRK06916 221 HEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKY------NVLFITDEVATGFGR--TGKMFACEHENVTPDIMTA- 291 (460)
T ss_pred CCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHc------CCEEEeechhhCCCc--CchhhHHHhcCCCCCeeee-
Confidence 3455666554 24554655 2378999999999 999999999876422 1100001111113577764
Q ss_pred CCcCCCCCc-CeeEEEEeC
Q 018437 275 GHKYGLVYA-GVGWVVWRT 292 (356)
Q Consensus 275 ~hK~l~~P~-g~g~l~~~~ 292 (356)
-|.+.+.+ .+|.++.++
T Consensus 292 -gK~l~gG~~Pi~av~~~~ 309 (460)
T PRK06916 292 -GKGLTGGYLPIAITVTTD 309 (460)
T ss_pred -ehhhhcCccccceeeecH
Confidence 58766553 678887764
No 358
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.50 E-value=7.6e-06 Score=80.23 Aligned_cols=190 Identities=9% Similarity=0.005 Sum_probs=104.4
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++.... .. .+ ...+.++.+.+.+++... ....++++||||+..|++.++...
T Consensus 64 h~~p~v~~Ai~~q~~~~~~-~~-~~--~~~~~~la~~l~~~~p~~------~~v~f~~sGseA~e~AlklAr~~t----- 128 (431)
T PRK06209 64 HAYPPVVEAVREALQDGCN-FT-RP--SAIELDAAESFLELIDGA------DMVKFCKNGSDATSAAVRLARAYT----- 128 (431)
T ss_pred CCCHHHHHHHHHHHHhCcC-CC-CC--CHHHHHHHHHHHHhCCcc------ceEEEecCHHHHHHHHHHHHHHHh-----
Confidence 3457888888877764321 11 12 233445667777776321 137899999999999999987641
Q ss_pred hcCCCCCCCeEEec-CCCcchHHHH---HH--hhCCe--eE--EEEecCCccccCHHHHHHHHhh---CceEEEEecCCC
Q 018437 147 EQGKPYDKPNIVTG-ANVQVCWEKF---AR--YFEVE--LK--EVKLEEGYYVMNPVKAVELVDE---NTICVAAILGST 213 (356)
Q Consensus 147 ~~g~~~~~~~vi~s-~~~h~s~~~~---~~--~~G~~--v~--~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~ 213 (356)
| +.+|+.. ...+..+... .. ..|.. +. .+.+. .-|+++|++++++ ++.+|++-....
T Consensus 129 --g----r~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~d~~~l~~~l~~~~~~~aavi~Epv~g 198 (431)
T PRK06209 129 --G----RDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR----YNDIASLEALFEDHPGRIACVILEPATA 198 (431)
T ss_pred --C----CCeEEEeccCccccccccccccCCCCCCCChhHhccccccC----CCCHHHHHHHHHhCCCCEEEEEEccccC
Confidence 1 3455543 1221111000 00 00111 00 11111 1278999998863 344555433222
Q ss_pred cccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 214 ~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
..+....+++|.++|++| ++++++|+++.|+... ...- ...+.+ ..|.++ .-|.+++....|.++.++
T Consensus 199 ~~~~~~~l~~l~~lc~~~------g~lLI~DEv~tG~~~~-~~g~-~~~~gv-~PDi~t--~gK~lggG~p~~av~~~~ 266 (431)
T PRK06209 199 DEPQDGFLHEVRRLCHEN------GALFILDEMITGFRWH-MRGA-QKLYGI-VPDLSC--FGKALGNGFAVSALAGKR 266 (431)
T ss_pred CCCCHHHHHHHHHHHHHc------CCEEEEEcccccCCcC-cchh-hHHhCC-Ccceee--ehhhhcCCcccEEEEEHH
Confidence 222234599999999999 9999999998664221 0000 001111 346655 468876655567777754
No 359
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.48 E-value=1.6e-05 Score=78.56 Aligned_cols=204 Identities=13% Similarity=-0.007 Sum_probs=114.8
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++.-...... ....+...++.+.+++++..+. ....++++||||+..|++.++..+..+
T Consensus 63 h~~p~v~~Ai~~ql~~l~~~~~~-~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGsEAve~AlKlAr~~~~~~-- 134 (466)
T PRK07030 63 HANPRINQRIKDQVDQLEHVILA-GFSHEPVIELSERLVKITPPGL-----SRCFYADNGSSAIEVALKMSFHYWRNR-- 134 (466)
T ss_pred CCCHHHHHHHHHHHHhcCCcccc-ccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCCcHHHHHHHHHHHHHHHHHh--
Confidence 34578888888777642211111 1123344567777887763221 247899999999999999998753211
Q ss_pred hcCCCCCCCeEEecC-CCcchHHHHHHhhCC------------eeEEEEecCCcc------------ccCHHHHHHHHh-
Q 018437 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYFEV------------ELKEVKLEEGYY------------VMNPVKAVELVD- 200 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~-~~h~s~~~~~~~~G~------------~v~~v~~~~~~~------------~~d~~~L~~~i~- 200 (356)
|.. .+.+|+.-. ..|-...-+....|. .+..+|.... + .-+++.+++.+.
T Consensus 135 --g~t-~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~l~~le~~~~~ 210 (466)
T PRK07030 135 --GKP-RKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDC-YLRPEGMSWEEHSRRMFAHMEQTLAE 210 (466)
T ss_pred --CCC-CCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCc-cccccCCCHHHHHHHHHHHHHHHHHh
Confidence 111 134555444 444433333322221 1334443211 1 113566777775
Q ss_pred --hCceEEEEec-CCCccccc----CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEE
Q 018437 201 --ENTICVAAIL-GSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINV 273 (356)
Q Consensus 201 --~~~~~v~~~~-~~~~tG~~----~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~ 273 (356)
++..+|++.- .....|.+ +-+++|.++|+++ |+++|+|+++.|+... ..-......--..|.+++
T Consensus 211 ~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~------g~llI~DEV~TGfGRt--G~~~a~~~~gv~PDiv~~ 282 (466)
T PRK07030 211 HHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRY------GVHLIHDEIAVGFGRT--GTMFACEQAGIRPDFLCL 282 (466)
T ss_pred CCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHc------CCEEEEeehhhCcCcc--ccchHHHhcCCCCCEEee
Confidence 3455666554 24444655 2378999999999 9999999998775321 000000111113677776
Q ss_pred cCCcCCCCCc-CeeEEEEeC
Q 018437 274 SGHKYGLVYA-GVGWVVWRT 292 (356)
Q Consensus 274 ~~hK~l~~P~-g~g~l~~~~ 292 (356)
-|.+.+.+ ..|.++.++
T Consensus 283 --gKgl~gG~~Pi~av~~~~ 300 (466)
T PRK07030 283 --SKALTGGYLPLAAVLTTD 300 (466)
T ss_pred --ehhccCCcccceEEEecH
Confidence 58776664 678887764
No 360
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.47 E-value=1.8e-05 Score=77.34 Aligned_cols=204 Identities=12% Similarity=-0.074 Sum_probs=110.3
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++.-...... ....+...++.+.+.++.+.+. ....++++||||+..|++.++......
T Consensus 56 h~~p~i~~ai~~q~~~~~~~~~~-~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGseA~e~AlklAr~~~~~~-- 127 (422)
T PRK05630 56 HGHPRLKAAAHKQIDTMSHVMFG-GLTHEPAIKLTRKLLNLTDNGL-----DHVFYSDSGSVSVEVAIKMALQYSKGQ-- 127 (422)
T ss_pred CCCHHHHHHHHHHHHhCCCcccC-CcCCHHHHHHHHHHHhhCCCCc-----CEEEEeCCcHHHHHHHHHHHHHHHHhc--
Confidence 34578888888777642211110 0112333456667777754221 247899999999999999998753211
Q ss_pred hcCCCCCCCeEEecC-CCcchHHHHHHhhC-------------CeeEEEEecCCccccC-------HHHHHHHHhhCceE
Q 018437 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYFE-------------VELKEVKLEEGYYVMN-------PVKAVELVDENTIC 205 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~-~~h~s~~~~~~~~G-------------~~v~~v~~~~~~~~~d-------~~~L~~~i~~~~~~ 205 (356)
|.. .+.+|+.-. ..|-...-+....+ -.+..+|.... ...+ .+.+++.+.+++.+
T Consensus 128 --g~~-~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~iAA 203 (422)
T PRK05630 128 --GHP-ERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPV-RGSSPQEISEYLRSLELLIDETVAA 203 (422)
T ss_pred --CCC-CCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcc-cCCChHHHHHHHHHHHHHHhhceEE
Confidence 111 134555444 44543322222211 12334443311 0111 24556666666666
Q ss_pred EEEecC-CCccccc----CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCC
Q 018437 206 VAAILG-STLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL 280 (356)
Q Consensus 206 v~~~~~-~~~tG~~----~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~ 280 (356)
|++.-. ....|.+ +.+++|.++|++| |+++++|+++.|+... ..-......--..|.+++ -|.+.
T Consensus 204 vi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~------g~llI~DEv~tG~Grt--G~~~a~~~~gv~PDi~t~--gK~l~ 273 (422)
T PRK05630 204 IIIEPIVQGAGGMRFHDVALIEGVRTLCDKH------DILLIADEIATGFGRT--GELFATLAAGVTPDIMCV--GKALT 273 (422)
T ss_pred EEEechhcCcCCcccCCHHHHHHHHHHHHHc------CCEEEEecceeCCCcC--chhhHHHhcCCCCCeeee--echhh
Confidence 666542 4444554 4589999999999 9999999998764221 000001111113566654 68875
Q ss_pred CC-cCeeEEEEeC
Q 018437 281 VY-AGVGWVVWRT 292 (356)
Q Consensus 281 ~P-~g~g~l~~~~ 292 (356)
+. ...|.++.++
T Consensus 274 gG~~p~~av~~~~ 286 (422)
T PRK05630 274 GGFMSFAATLCTD 286 (422)
T ss_pred cCccccceeeccH
Confidence 54 2456666654
No 361
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=98.47 E-value=4.2e-05 Score=75.56 Aligned_cols=195 Identities=10% Similarity=-0.049 Sum_probs=112.2
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.++........ ...+...++.+.++++++... ....++++|+||+..|+..++..
T Consensus 88 ~~p~v~~Ai~~ql~~~~~~~~~--~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGseAve~AlklAr~~------- 153 (459)
T PRK06082 88 GHPHVIEKVKEQMAKLPFSPRR--FTNETAIECAEKLTEIAGGEL-----NRVLFAPGGTSAIGMALKLARHI------- 153 (459)
T ss_pred CCHHHHHHHHHHHHhCCCccCc--cCCHHHHHHHHHHHHhCCCCC-----CEEEECCCcHHHHHHHHHHHHHh-------
Confidence 4578888888777643222111 123445567777888875321 24789999999999999998764
Q ss_pred cCCCCCCCeEEe-cCCCcchHHHHHHhhCC------------eeEEEEecCCccc-----c------CHHHHHHHHhh--
Q 018437 148 QGKPYDKPNIVT-GANVQVCWEKFARYFEV------------ELKEVKLEEGYYV-----M------NPVKAVELVDE-- 201 (356)
Q Consensus 148 ~g~~~~~~~vi~-s~~~h~s~~~~~~~~G~------------~v~~v~~~~~~~~-----~------d~~~L~~~i~~-- 201 (356)
.| +.+|+. ....|-...-++...|. ++..+|... .++ . +++.|++.+++
T Consensus 154 tg----r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 228 (459)
T PRK06082 154 TG----NFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAV-SYRGAFPDADGSDVHYADYLEYVIEKEG 228 (459)
T ss_pred cC----CCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCc-ccccccCChhHHHHHHHHHHHHHHhcCC
Confidence 11 345554 44455544333333221 134444221 011 1 13567777752
Q ss_pred CceEEEEecCCCcccc-cCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCc
Q 018437 202 NTICVAAILGSTLTGE-FED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHK 277 (356)
Q Consensus 202 ~~~~v~~~~~~~~tG~-~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK 277 (356)
+..+|++--.... |. +-| +++|.++|++| |+++++|+++.|+... ..-......--..|.++ .-|
T Consensus 229 ~vAavIvEPv~g~-g~~~~~~~yl~~lr~lc~~~------g~llI~DEV~tG~GRt--G~~fa~e~~gv~PDiv~--~gK 297 (459)
T PRK06082 229 GIGAFIAEAVRNT-DVQVPSKAYWKRVREICDKH------NVLLIIDEIPNGMGRT--GEWFTHQAYGIEPDILC--IGK 297 (459)
T ss_pred CEEEEEECCccCC-CCcCCCHHHHHHHHHHHHHc------CCEEEEechhhCCCcc--chhhHhHhhCCCCCEEE--ecc
Confidence 4555655444333 43 334 89999999999 9999999998874321 00000011111467776 468
Q ss_pred CCCCCc-CeeEEEEeC
Q 018437 278 YGLVYA-GVGWVVWRT 292 (356)
Q Consensus 278 ~l~~P~-g~g~l~~~~ 292 (356)
.+.+.+ .+|.++.++
T Consensus 298 gl~gG~~P~~av~~~~ 313 (459)
T PRK06082 298 GLGGGLVPIAAMITKD 313 (459)
T ss_pred cccCCCCcceEEEEcH
Confidence 876653 678887765
No 362
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.47 E-value=3.2e-06 Score=76.31 Aligned_cols=226 Identities=13% Similarity=0.044 Sum_probs=150.5
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH-HHHHHHHHHHhcCCCCCCCeEEec----CCCcchHHHHHHh
Q 018437 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA-FKRKWQQKRKEQGKPYDKPNIVTG----ANVQVCWEKFARY 173 (356)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~-~~~~~~~~~~~~g~~~~~~~vi~s----~~~h~s~~~~~~~ 173 (356)
-+...++++.|+...+ +.+.++= ..|+..++. +-.+-. ++-+|+.- ...||++.+.+++
T Consensus 115 ~il~l~~~iVGA~e~E-----vavmNsL-TvNlh~Ll~sFyKPTe----------kR~KILlE~kaFPSDhYAiesQ~~l 178 (465)
T KOG3846|consen 115 PILPLLAPIVGAQENE-----VAVMNSL-TVNLHSLLISFYKPTE----------KRFKILLEKKAFPSDHYAIESQCKL 178 (465)
T ss_pred hhhhhhhhhccCCchh-----hhhHhhh-hhHHHHHHHHhcCCcc----------hhhhhhhccCCCCchHHHHHhhhhh
Confidence 4666789999998643 3344433 334444332 222111 12245432 3568899999999
Q ss_pred hCCee----EEEEecCCccccCHHHHHHHHhhC---ceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecc
Q 018437 174 FEVEL----KEVKLEEGYYVMNPVKAVELVDEN---TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (356)
Q Consensus 174 ~G~~v----~~v~~~~~~~~~d~~~L~~~i~~~---~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a 246 (356)
-|+.+ +.|...+..-.+..+++.+.|+++ ..+|+++.....||..-|+.+|...-+.. |+++-.|-|
T Consensus 179 hG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~k------gc~VGfDLA 252 (465)
T KOG3846|consen 179 HGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFK------GCLVGFDLA 252 (465)
T ss_pred cCCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCC------CcEechhhh
Confidence 99873 445554433566778888888753 46677888899999999999999555555 999999988
Q ss_pred cccccccccCCCCcccccCCCceEEEEcCCcCCCC-CcCeeEEEEeCCCCCccccccccCCCCCCCCC-----------c
Q 018437 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLV-YAGVGWVVWRTKDDLPDELVFHINYLGSDQPT-----------F 314 (356)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~-P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~-----------~ 314 (356)
++.+-.| ..+..-++|+.++.+.|++.+ +.|+|-+++..+ ...+....-..|+++...+ +
T Consensus 253 HAvgNVp-------L~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHek-h~~~~~prl~GWwgh~~s~RF~Mdnvl~lip 324 (465)
T KOG3846|consen 253 HAVGNVP-------LQLHDWGVDFACWCSYKYLNAGAGGIGGLFVHEK-HTKESLPRLAGWWGHDPSKRFQMDNVLELIP 324 (465)
T ss_pred hhhcCCc-------eEEeecCCceEEEeeecccccCCCccceeeeehh-hhcchhhHHhhhccCCcchhhhhccccccCc
Confidence 8754442 334455899999999999876 456777777654 3334544556788775311 1
Q ss_pred cccC----CCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 315 TLNF----SKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 315 ~~~~----tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
...| .++.....++..+|+.+.+-.+.++..+..-++.||
T Consensus 325 Ga~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYl 368 (465)
T KOG3846|consen 325 GALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYL 368 (465)
T ss_pred cccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHH
Confidence 1112 334456788889999998888888888888887775
No 363
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.47 E-value=3.6e-05 Score=76.12 Aligned_cols=200 Identities=13% Similarity=0.055 Sum_probs=111.9
Q ss_pred CChHHHHHHHHHHhcccCC-CcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEe-CChhHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYV-DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGT-VGSSEAIMLAGLAFKRKWQQK 144 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t-~Ggt~a~~~al~~~~~~~~~~ 144 (356)
+.+|.+.+++.+.++.... ..... ..+.+.++.+.+.+++..+.. ......++ ++||||+..|++.+|..
T Consensus 79 h~~p~v~~Ai~~ql~~~~~~~~~~~--~~~~~~~la~~L~~~~p~~~~--~~~~v~f~~~SGSEAve~AlklAr~~---- 150 (464)
T PRK06938 79 HNHPVVIEAIQQVLADELPLHTLDL--TTPVKDQFVQDLFASLPEAFA--REAKIQFCGPTGTDAVEAALKLVKTA---- 150 (464)
T ss_pred CCCHHHHHHHHHHHHhhhccccccc--CCHHHHHHHHHHHHhCccccc--ccceEEEeCCCcHHHHHHHHHHHHHh----
Confidence 3457888888877754321 11111 123333455556665432210 00124454 68999999999999864
Q ss_pred HHhcCCCCCCCeEEecCC-CcchHHHHHHhhC------------CeeEEEEecCCccc------------cCHHHHHHHH
Q 018437 145 RKEQGKPYDKPNIVTGAN-VQVCWEKFARYFE------------VELKEVKLEEGYYV------------MNPVKAVELV 199 (356)
Q Consensus 145 ~~~~g~~~~~~~vi~s~~-~h~s~~~~~~~~G------------~~v~~v~~~~~~~~------------~d~~~L~~~i 199 (356)
.| +.+|+.-.. .|-...-++...| -++..+|.... ++ .+.+.+++.+
T Consensus 151 ---tg----r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~l~~~i 222 (464)
T PRK06938 151 ---TG----RSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYD-YRCPFGLGGEAGVRANLHYLENLL 222 (464)
T ss_pred ---hC----CCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCcc-ccccccCchhhHHHHHHHHHHHHH
Confidence 11 345665443 4433222222211 12445554321 11 2367788888
Q ss_pred hh------CceEEEEecCCCcccccC----CHHHHHHHHHHhhhccCCCCcEEEeccccccccc-ccCCCCcccccCCCc
Q 018437 200 DE------NTICVAAILGSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP-FLYPDLEWDFRLPLV 268 (356)
Q Consensus 200 ~~------~~~~v~~~~~~~~tG~~~----~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~-~~~~~~~~~~~~~~~ 268 (356)
.+ ++.+|++--....-|.+- -++++.++|++| |+++|+|+++.|+... .+.....+++ ..
T Consensus 223 ~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~------giLlI~DEV~tGfGRtG~~~a~e~~gv---~P 293 (464)
T PRK06938 223 DDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEA------GIPLIVDEIQSGFGRTGKMFAFEHAGI---IP 293 (464)
T ss_pred HhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCcCcHHHHHHhcCC---CC
Confidence 63 356666655444445542 378999999999 9999999998875321 0000001122 36
Q ss_pred eEEEEcCCcCCCCCcCeeEEEEeCC
Q 018437 269 KSINVSGHKYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 269 Ds~~~~~hK~l~~P~g~g~l~~~~~ 293 (356)
|.+++ -|.+++...+|.++.+++
T Consensus 294 Div~~--gKglggG~PlsAv~~~~~ 316 (464)
T PRK06938 294 DVVVL--SKAIGGSLPLAVVVYREW 316 (464)
T ss_pred CEEEe--eccccCCCceEEEeehhH
Confidence 88776 487766677889888753
No 364
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=98.44 E-value=1.9e-05 Score=77.94 Aligned_cols=197 Identities=16% Similarity=0.028 Sum_probs=113.6
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++.-......+ .......++.+.+.++++... ....++++||||+..|++.++..
T Consensus 69 h~~p~i~~Ai~~ql~~~~~~~~~~-~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGsEA~e~AlklAr~~------ 136 (457)
T PRK05639 69 YSHPKLVKAVQEQVALIQHSMIGY-THSERAIRVAEKLAEISPIEN-----PKVLFGLSGSDAVDMAIKVSKFS------ 136 (457)
T ss_pred CCCHHHHHHHHHHHHhccccccCc-cCCHHHHHHHHHHHhhCCCCc-----CEEEEeCchHHHHHHHHHHHHHh------
Confidence 345788888887776422111111 112333456677777765321 24789999999999999999764
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHHhhC--------C-----eeEEEEecCCccc--------cCH--------HHHH
Q 018437 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFE--------V-----ELKEVKLEEGYYV--------MNP--------VKAV 196 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~-~h~s~~~~~~~~G--------~-----~v~~v~~~~~~~~--------~d~--------~~L~ 196 (356)
.| +.+|+.-.. .|-...-+....| . ++..+|.... ++ -|. +.|+
T Consensus 137 -tg----r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~le 210 (457)
T PRK05639 137 -TR----RPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNP-YRNPWGINGYEEPDELINRFLDYLE 210 (457)
T ss_pred -cC----CCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCcc-ccccccccccCCHHHHHHHHHHHHH
Confidence 11 356665444 4443332222222 1 1445554321 11 122 2455
Q ss_pred HHHh------hCceEEEEecCCCcccccC----CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCC-ccc-cc
Q 018437 197 ELVD------ENTICVAAILGSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWD-FR 264 (356)
Q Consensus 197 ~~i~------~~~~~v~~~~~~~~tG~~~----~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~-~~ 264 (356)
+.+. ++..+|++.-.....|.+. -+++|.++|++| |+++++|+++.|+... ... ... +.
T Consensus 211 ~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~------g~llI~DEv~tG~Grt---G~~~a~~~~g 281 (457)
T PRK05639 211 NYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEH------GILLVMDEVQTGIGRT---GKWFASEWFE 281 (457)
T ss_pred HHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhccCcC---chHHHHHhcC
Confidence 5442 3456676665555556543 378999999999 9999999998864221 100 011 11
Q ss_pred CCCceEEEEcCCcCCCCCcCeeEEEEeCC
Q 018437 265 LPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 265 ~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~ 293 (356)
+ ..|.++ .-|.+.+..+.|.++.+++
T Consensus 282 v-~PDiv~--~gK~l~gG~pi~av~~~~~ 307 (457)
T PRK05639 282 V-KPDLII--FGKGVASGMGLSGVIGRKE 307 (457)
T ss_pred C-CCCEEE--echhhcCCCcceeEEehHH
Confidence 1 468777 4688776677888887643
No 365
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=98.44 E-value=4e-05 Score=75.62 Aligned_cols=197 Identities=10% Similarity=-0.051 Sum_probs=109.0
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.+....... ......+.+.++.+.+.+++.... .....++++||||+..|++.+|...
T Consensus 70 h~~p~v~~ai~~q~~~~~~~~-~~~~~~~~~~~la~~L~~~~p~~~----~~~v~f~~sGseA~e~AlklAr~~t----- 139 (451)
T PRK06918 70 HSHPKVKEALHKQVDQYIHTG-FNVMMYEPYIELAEKLAALAPGSF----DKKVLFLNSGAEAVENAVKIARKYT----- 139 (451)
T ss_pred CCCHHHHHHHHHHHHhccCcc-ccccccHHHHHHHHHHHHhCCCCC----CCEEEEcCCcHHHHHHHHHHHHHHh-----
Confidence 345788888887776432111 111123445567777888764321 0147899999999999999998641
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHHhhC-------------CeeEEEEecCC-c--cccC--------HHHHHHHHh-
Q 018437 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFE-------------VELKEVKLEEG-Y--YVMN--------PVKAVELVD- 200 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~-~h~s~~~~~~~~G-------------~~v~~v~~~~~-~--~~~d--------~~~L~~~i~- 200 (356)
| +.+|+.-.. .|-...-+....| -++..+|.... . ..+. .+.+++.+.
T Consensus 140 --g----r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (451)
T PRK06918 140 --K----RQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFIS 213 (451)
T ss_pred --C----CCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHh
Confidence 1 345655443 4433322222212 11334443210 0 0010 223444332
Q ss_pred ----hCceEEEEecCCCcc-ccc----CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc--CCCce
Q 018437 201 ----ENTICVAAILGSTLT-GEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPLVK 269 (356)
Q Consensus 201 ----~~~~~v~~~~~~~~t-G~~----~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~D 269 (356)
+++.+|++ -|-... |.+ +-+++|.++|++| |++++.|++|.++.. .. . .+.+. ....|
T Consensus 214 ~~~~~~iAavi~-EPi~g~gG~~~~~~~~l~~l~~l~~~~------gillI~DEV~tg~gr--~g-~-~~a~~~~~v~pD 282 (451)
T PRK06918 214 EVAPETIAAVVM-EPVQGEGGFIVPSKKFVQEVRNICSEH------GILFVADEIQTGFAR--TG-K-YFAIEHFDVVPD 282 (451)
T ss_pred hcCCCceEEEEE-CcccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCcCc--cC-c-eehhHhcCCCCC
Confidence 23444544 444443 543 2278999999999 999999999987543 11 1 11111 11256
Q ss_pred EEEEcCCcCCCCCcCeeEEEEeC
Q 018437 270 SINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 270 s~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
.+ +.-|.+.+.+.+|+++.++
T Consensus 283 i~--t~sK~l~~G~pig~v~~~~ 303 (451)
T PRK06918 283 LI--TVSKSLGAGVPISGVIGRK 303 (451)
T ss_pred EE--eeehhhcCCCccEEEEEcH
Confidence 54 4568877778889998764
No 366
>PRK06917 hypothetical protein; Provisional
Probab=98.44 E-value=3.8e-05 Score=75.60 Aligned_cols=204 Identities=11% Similarity=-0.048 Sum_probs=112.6
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++....... .....+.+.++.+.+.+++.... ....++++||||+..|++.++..+.. |
T Consensus 47 h~hp~v~~Ai~~ql~~~~~~~~-~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGsEAve~AlklAr~~~~~-r- 118 (447)
T PRK06917 47 HGVKEIADAIKEQAEEVSFVYR-SQFTSEPAEKLAKKLSDLSPGDL-----NWSFFVNSGSEANETAMKIAIQHFQE-R- 118 (447)
T ss_pred CCCHHHHHHHHHHHhhCcCccc-cccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCChHHHHHHHHHHHHHHHHh-c-
Confidence 3458888888877765322111 11123444567777888764321 24789999999999999999876432 1
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHHhhCC------------eeEEEEecCCccc------------cCHHHHHHHHhh
Q 018437 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEV------------ELKEVKLEEGYYV------------MNPVKAVELVDE 201 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~-~h~s~~~~~~~~G~------------~v~~v~~~~~~~~------------~d~~~L~~~i~~ 201 (356)
|. ..+.+|+.-.. .|-...-+....|. .+..+|.... .+ -+++.+++.++.
T Consensus 119 --g~-t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~le~~i~~ 194 (447)
T PRK06917 119 --GI-QGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYC-YRCPVQKVYPTCQLACATELETAIER 194 (447)
T ss_pred --CC-CCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcc-cccccCCChHHHHHHHHHHHHHHHHh
Confidence 11 11345665443 34332222222221 1223332110 11 134677777752
Q ss_pred ----CceEEEEecCCCccc-cc----CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEE
Q 018437 202 ----NTICVAAILGSTLTG-EF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSIN 272 (356)
Q Consensus 202 ----~~~~v~~~~~~~~tG-~~----~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~ 272 (356)
++.+|++.-.....| .+ .-+++|.++|+++ |+++++|+++.|+... ..-......--..|.++
T Consensus 195 ~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~------g~llI~DEv~tGfGRt--G~~~a~~~~gv~PDi~~ 266 (447)
T PRK06917 195 IGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHY------DILFIADEVMTGLGRT--GAMFAMEHWGVEPDIMT 266 (447)
T ss_pred cCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHc------CCEEEEechhhCcCcc--cchhhHHhcCCCCCEEE
Confidence 455666554443333 33 2378999999999 9999999998764221 10000010111357666
Q ss_pred EcCCcCCCCCc-CeeEEEEeC
Q 018437 273 VSGHKYGLVYA-GVGWVVWRT 292 (356)
Q Consensus 273 ~~~hK~l~~P~-g~g~l~~~~ 292 (356)
+ -|.+.+.+ ..|.++.++
T Consensus 267 ~--gK~l~~G~~Pi~a~~~~~ 285 (447)
T PRK06917 267 L--GKGLGAGYTPIAATVVSD 285 (447)
T ss_pred e--eehhccCCcceEEEEEcH
Confidence 5 58876654 567777764
No 367
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=98.43 E-value=1.7e-05 Score=77.66 Aligned_cols=203 Identities=12% Similarity=-0.024 Sum_probs=111.4
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++.-.+... .....+...++.+.++++++.+. ....++++||||+..|++.++..+..+
T Consensus 59 h~~p~i~~Ai~~q~~~~~~~~~-~~~~~~~~~~la~~L~~~~p~~~-----~~v~f~~SGsEAve~AlklAr~~~~~~-- 130 (428)
T PRK07986 59 YNHPQLNAAMKSQIDAMSHVMF-GGITHPPAIELCRKLVAMTPQPL-----ECVFLADSGSVAVEVAMKMALQYWQAK-- 130 (428)
T ss_pred CCCHHHHHHHHHHHhhcCCccc-cccCCHHHHHHHHHHHhhCCCCc-----CEEEEeCCcHHHHHHHHHHHHHHHHhc--
Confidence 3457888888887764322111 11122334566777877764321 247899999999999999998753211
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHHhhC-------------CeeEEEEecCCcc-----ccCHHHHHHHHhh---Cce
Q 018437 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFE-------------VELKEVKLEEGYY-----VMNPVKAVELVDE---NTI 204 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~-~h~s~~~~~~~~G-------------~~v~~v~~~~~~~-----~~d~~~L~~~i~~---~~~ 204 (356)
| .++.+|+.-.. .|-...-+....+ -.+..+|.....+ .-|++++++.++. +..
T Consensus 131 --g--~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~ia 206 (428)
T PRK07986 131 --G--EPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIA 206 (428)
T ss_pred --C--CCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEE
Confidence 1 11345655444 4433222222211 1123343321101 1256788888853 345
Q ss_pred EEEEecC-CCccccc----CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCC-cccccCCCceEEEEcCCcC
Q 018437 205 CVAAILG-STLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWDFRLPLVKSINVSGHKY 278 (356)
Q Consensus 205 ~v~~~~~-~~~tG~~----~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~Ds~~~~~hK~ 278 (356)
+|++-.. ....|.+ ..+++|.++|++| |+++++|+++.|+.. .... ..+..--..|.++ .-|.
T Consensus 207 avi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~------g~lLI~DEv~tG~Gr---tG~~fa~~~~gv~PDi~t--~gK~ 275 (428)
T PRK07986 207 AVILEPIVQGAGGMRIYHPEWLKRVRKLCDRE------GILLIADEIATGFGR---TGKLFACEHAGIAPDILC--LGKA 275 (428)
T ss_pred EEEEechhcCcCCcccCCHHHHHHHHHHHHHc------CCEEEEeccccCCcc---CCCeeeecccCCCCCEEE--echh
Confidence 5555432 3444543 3489999999999 999999999866422 1100 0111111357776 4687
Q ss_pred CCCC-cCeeEEEEeC
Q 018437 279 GLVY-AGVGWVVWRT 292 (356)
Q Consensus 279 l~~P-~g~g~l~~~~ 292 (356)
+.+. ..+|.++.++
T Consensus 276 l~gG~~p~~av~~~~ 290 (428)
T PRK07986 276 LTGGTMTLSATLTTR 290 (428)
T ss_pred hhCCcccCcchhchH
Confidence 6555 3566666653
No 368
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.41 E-value=3.3e-05 Score=75.68 Aligned_cols=194 Identities=10% Similarity=-0.091 Sum_probs=109.8
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++.... . .. ....+.++.+.+.++++... ....++++|+||+..|++.+|...
T Consensus 69 h~~p~v~~ai~~q~~~~~~-~-~~--~~~~~~~la~~L~~~~~~~~-----~~v~f~~SGsEA~e~AiklAr~~t----- 134 (433)
T PRK00615 69 HSHPKICDAIQQGAERGTS-Y-GL--TSEQEILFAEELFSYLGLED-----HKIRFVSSGTEATMTAVRLARGIT----- 134 (433)
T ss_pred CCCHHHHHHHHHHHHhCCC-C-CC--CCHHHHHHHHHHHHhCCCCc-----CEEEEeCchHHHHHHHHHHHHHhh-----
Confidence 3457888888877764321 1 11 12334566777777765431 247899999999999999988641
Q ss_pred hcCCCCCCCeEEecCC-CcchH---HHHHHhhCCe---e-EEE---EecCCcc---ccCHHHHHHHHhh---CceEEEEe
Q 018437 147 EQGKPYDKPNIVTGAN-VQVCW---EKFARYFEVE---L-KEV---KLEEGYY---VMNPVKAVELVDE---NTICVAAI 209 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~-~h~s~---~~~~~~~G~~---v-~~v---~~~~~~~---~~d~~~L~~~i~~---~~~~v~~~ 209 (356)
| +.+|+.-.. .|-.. .......+-. . ... +...... .-|+++|++.+.+ +..+|++.
T Consensus 135 --g----r~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~E 208 (433)
T PRK00615 135 --G----RSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFE 208 (433)
T ss_pred --C----CCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEEC
Confidence 1 345654333 34321 1111111100 0 000 0000000 1167889888853 35566666
Q ss_pred cCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccc-ccCCCceEEEEcCCcCCCCCcC
Q 018437 210 LGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINVSGHKYGLVYAG 284 (356)
Q Consensus 210 ~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~Ds~~~~~hK~l~~P~g 284 (356)
......|.+.| +++|.++|++| |+++++|+++.|+ . ........ +.+ ..|.++ .-|.+++...
T Consensus 209 pv~~~~G~~~p~~~yl~~l~~lc~~~------g~llI~DEv~tG~-R--~G~~ga~~~~gv-~PDi~~--~gK~lggG~p 276 (433)
T PRK00615 209 PICANMGVVLPKPGFIEGIIQTCRRT------GSLSIMDEVVTGF-R--VAQGGAAAIYHV-KPDITV--YGKILGGGLP 276 (433)
T ss_pred CCCCCCCcccCCHHHHHHHHHHHHHc------CCEEEEEcccccc-c--ccHhHHHHhcCC-CCCeEE--EcccccCCcc
Confidence 55555577655 45999999999 9999999999654 1 11000001 111 356665 4688765555
Q ss_pred eeEEEEeC
Q 018437 285 VGWVVWRT 292 (356)
Q Consensus 285 ~g~l~~~~ 292 (356)
.|.++.++
T Consensus 277 ~~av~~~~ 284 (433)
T PRK00615 277 AAAVVAHK 284 (433)
T ss_pred eeeeeecH
Confidence 77777764
No 369
>PRK07483 hypothetical protein; Provisional
Probab=98.40 E-value=7e-05 Score=73.67 Aligned_cols=204 Identities=12% Similarity=0.006 Sum_probs=111.8
Q ss_pred CChHHHHHHHHHHhcccCC-CcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYV-DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (356)
+.+|.+.+++.+.++.... +...+ ..+...++.+.+.+++.-.. ....++++||||+..|++.++..+..
T Consensus 46 h~~p~v~~av~~ql~~~~~~~~~~~--~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGsEAve~AlklAr~~~~~-- 116 (443)
T PRK07483 46 HSHPRVIAAIHAQIDRLAYAHTSFF--TTEPAEALADRLVAAAPAGL-----EHVYFVSGGSEAVEAALKLARQYFVE-- 116 (443)
T ss_pred CCCHHHHHHHHHHHHhccCcccccc--CCHHHHHHHHHHHHhCCCCC-----CEEEEcCCcHHHHHHHHHHHHHHHHh--
Confidence 3457888888877764321 11111 12334466677777763221 23789999999999999999875421
Q ss_pred HhcCCCCCCCeEEec-CCCcchHHHHHHhhC------------CeeEEEEecCCcccc-------------CHHHHHHHH
Q 018437 146 KEQGKPYDKPNIVTG-ANVQVCWEKFARYFE------------VELKEVKLEEGYYVM-------------NPVKAVELV 199 (356)
Q Consensus 146 ~~~g~~~~~~~vi~s-~~~h~s~~~~~~~~G------------~~v~~v~~~~~~~~~-------------d~~~L~~~i 199 (356)
.|.. .+.+|+.- ...|-...-+....| ..+..+|.... ++- .+++|++++
T Consensus 117 --~g~~-~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~ 192 (443)
T PRK07483 117 --IGQP-QRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYA-YREQRAGESDEAYGQRLADELEAKI 192 (443)
T ss_pred --cCCC-CCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCcc-ccccccCCCHHHHHHHHHHHHHHHH
Confidence 1211 13456654 444443322222211 11333433210 111 135677666
Q ss_pred h----hCceEEEEecCCC-cccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceE
Q 018437 200 D----ENTICVAAILGST-LTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKS 270 (356)
Q Consensus 200 ~----~~~~~v~~~~~~~-~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds 270 (356)
. +++.+|++--... .-|.+.+ +++|.++|++| |+++|+|+++.|+... ..-...+..--..|.
T Consensus 193 ~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~------gillI~DEV~tGfGRt--G~~~a~~~~gv~PDi 264 (443)
T PRK07483 193 LELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRY------GVLLILDEVMCGMGRT--GTLFACEEDGVAPDL 264 (443)
T ss_pred HhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHh------CCEEEEecceeCcccC--cHHHHHhhcCCCCCe
Confidence 4 2445565554332 2255533 89999999999 9999999998875321 000000000113577
Q ss_pred EEEcCCcCCCCCc-CeeEEEEeCC
Q 018437 271 INVSGHKYGLVYA-GVGWVVWRTK 293 (356)
Q Consensus 271 ~~~~~hK~l~~P~-g~g~l~~~~~ 293 (356)
+++ -|.+.+.+ .+|.++.+++
T Consensus 265 v~~--gK~l~gG~~Pi~av~~~~~ 286 (443)
T PRK07483 265 VTI--AKGLGAGYQPIGAVLASDR 286 (443)
T ss_pred eee--hhhhccCccccEEEEEcHH
Confidence 775 58776664 6788887653
No 370
>PRK06149 hypothetical protein; Provisional
Probab=98.37 E-value=4.8e-05 Score=81.83 Aligned_cols=197 Identities=11% Similarity=-0.053 Sum_probs=109.8
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.+....... .+ ......++.+.+++++..+. ....++++|+|||..|++.++...
T Consensus 600 ~hp~v~~Ai~~q~~~l~~~~-~~--~~~~~~elae~L~~~~p~~~-----~~v~f~~SGsEA~e~AlklAr~~t------ 665 (972)
T PRK06149 600 GHPRLAAAAARQWSLLNTNS-RF--HYAAVAEFSERLAALAPDGL-----DTVFLVNSGSEANDLAIRLAWAAS------ 665 (972)
T ss_pred CCHHHHHHHHHHHHhccccc-cc--cCHHHHHHHHHHHHhCCCCc-----CEEEEeCCchHHHHHHHHHHHHhc------
Confidence 45788888877665322211 11 12344566677887763211 237899999999999999887641
Q ss_pred cCCCCCCCeEEecCC-CcchHHHHHHhhC-------------CeeEEEEecCC-c--cc-cC-----HHHHHHHHh----
Q 018437 148 QGKPYDKPNIVTGAN-VQVCWEKFARYFE-------------VELKEVKLEEG-Y--YV-MN-----PVKAVELVD---- 200 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~-~h~s~~~~~~~~G-------------~~v~~v~~~~~-~--~~-~d-----~~~L~~~i~---- 200 (356)
| +.+||.... .|-...-+....+ -.+..++.... . +. .| .+.+++.++
T Consensus 666 -g----r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 740 (972)
T PRK06149 666 -G----RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDA 740 (972)
T ss_pred -C----CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhh
Confidence 1 345555544 4422111111100 01333433210 0 11 11 234444442
Q ss_pred --hCceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCC-cccccCCCceEEEE
Q 018437 201 --ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWDFRLPLVKSINV 273 (356)
Q Consensus 201 --~~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~Ds~~~ 273 (356)
+++.+|++--.....|.+.+ +++|.++|++| |+++|+|+++.|+.. ..... .+...--..|.+++
T Consensus 741 ~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~------g~llI~DEV~tGfGR--tG~~~~a~e~~gv~PDivt~ 812 (972)
T PRK06149 741 SGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRAR------GGVCIADEVQVGYGR--LGHYFWGFEQQGVVPDIITM 812 (972)
T ss_pred cCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHc------CCEEEEEeehhcCCc--cCccchhhhhcCCCCCEEEe
Confidence 24556666555555677777 99999999999 999999999955422 11000 01101114677765
Q ss_pred cCCcCCCCCcCeeEEEEeCC
Q 018437 274 SGHKYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 274 ~~hK~l~~P~g~g~l~~~~~ 293 (356)
-|.+++...+|.++.+++
T Consensus 813 --gK~lg~G~Pl~av~~~~~ 830 (972)
T PRK06149 813 --AKGMGNGHPLGAVITRRE 830 (972)
T ss_pred --cccccCCeeeEEEEEcHH
Confidence 588776677888888653
No 371
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=98.37 E-value=5.1e-05 Score=74.33 Aligned_cols=204 Identities=12% Similarity=-0.015 Sum_probs=109.4
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++........ ........++.++++++++-+. ....++++|++|+..|+..++.....+
T Consensus 61 h~~p~v~~ai~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~~~~-----~~v~f~~sGseA~e~AlklAr~~~~~~-- 132 (427)
T TIGR00508 61 YNHPRLNAAAQKQIDKMSHVMFG-GFTHKPAIELCQKLVKMTPNAL-----DCVFLADSGSVAVEVALKMALQYWQAK-- 132 (427)
T ss_pred CCCHHHHHHHHHHHHhcCCcccc-ccCCHHHHHHHHHHHhhCCCCC-----CEEEEeCCcHHHHHHHHHHHHHHHHhh--
Confidence 44578888888777642211110 0111223456667777764321 247899999999999999998754221
Q ss_pred hcCCCCCCCeEE-ecCCCcchHHHHHHhhCC-------------eeEEEEecCCcc-----ccCHHHHHHHHhh---Cce
Q 018437 147 EQGKPYDKPNIV-TGANVQVCWEKFARYFEV-------------ELKEVKLEEGYY-----VMNPVKAVELVDE---NTI 204 (356)
Q Consensus 147 ~~g~~~~~~~vi-~s~~~h~s~~~~~~~~G~-------------~v~~v~~~~~~~-----~~d~~~L~~~i~~---~~~ 204 (356)
|.+. +.+|+ .....|-...-+....|- .+..+|.....+ .-|++++++.+.+ +..
T Consensus 133 --~~~~-r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~va 209 (427)
T TIGR00508 133 --GEKN-RQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIA 209 (427)
T ss_pred --CCCC-ccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEE
Confidence 1111 23444 444555433222222221 112232211101 1156777777753 344
Q ss_pred EEEEecC-CCcccc----cCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCC-cccccCCCceEEEEcCCcC
Q 018437 205 CVAAILG-STLTGE----FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWDFRLPLVKSINVSGHKY 278 (356)
Q Consensus 205 ~v~~~~~-~~~tG~----~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~Ds~~~~~hK~ 278 (356)
+|++-.. ...-|. ..++++|.++|++| ++++++|+++.|+... ... ..+......|.++ .-|.
T Consensus 210 avivEPv~~g~gG~~~~~~~~l~~l~~lc~~~------~~llI~DEv~tG~Gr~---G~~~~~~~~~v~pDi~~--~gK~ 278 (427)
T TIGR00508 210 AVILEPIVQGAGGMRFYHPTYLKRVQALCKQY------DILLIADEIATGFGRT---GKLFACEHAGVVPDILC--VGKA 278 (427)
T ss_pred EEEEechhcCcCCcccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCcC---CccchhhhcCCCCCEEE--echh
Confidence 5554432 333343 36789999999999 9999999998653221 110 1111111457666 4687
Q ss_pred CCCCc-CeeEEEEeC
Q 018437 279 GLVYA-GVGWVVWRT 292 (356)
Q Consensus 279 l~~P~-g~g~l~~~~ 292 (356)
+.+.. .++.++.++
T Consensus 279 l~gG~~p~~a~~~~~ 293 (427)
T TIGR00508 279 LTGGYMTLSATVTTD 293 (427)
T ss_pred hhcCcccceEEEEcH
Confidence 65553 456666653
No 372
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.35 E-value=6.8e-05 Score=74.24 Aligned_cols=209 Identities=10% Similarity=-0.057 Sum_probs=112.9
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++.-..... .....+...++.+.+.+++.-.........+.++++||||+..|++.++.....+
T Consensus 80 h~~p~i~~Ai~~q~~~l~~~~~-~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~-- 156 (472)
T PRK08742 80 HAEPRIGAAIAAQAGELEQVML-AGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNR-- 156 (472)
T ss_pred CCCHHHHHHHHHHHHhCCCccc-cccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhc--
Confidence 3457888888776653111111 0111233446667777776321000001247899999999999999998764321
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHHhhCC------------eeEEEEecCCccc------------cCHHHHHHHHh-
Q 018437 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEV------------ELKEVKLEEGYYV------------MNPVKAVELVD- 200 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~-~h~s~~~~~~~~G~------------~v~~v~~~~~~~~------------~d~~~L~~~i~- 200 (356)
|.. .+.+||.-.. .|-...-+....|. ++..+|.... ++ -+++.+++.+.
T Consensus 157 --g~~-~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~l~~~~~~ 232 (472)
T PRK08742 157 --GEH-RRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDA-YLAEPGQSAEDYALQAADALQALFEQ 232 (472)
T ss_pred --CCC-CCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCc-cccccCCCHHHHHHHHHHHHHHHHHh
Confidence 111 1345655444 44333222222221 2344443211 11 13567777775
Q ss_pred --hCceEEEEec-CCCccccc----CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEE
Q 018437 201 --ENTICVAAIL-GSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINV 273 (356)
Q Consensus 201 --~~~~~v~~~~-~~~~tG~~----~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~ 273 (356)
+++.+|++-- .....|.+ +-++++.++|++| |+++|+|+++.|+... ..-...+..--..|.+++
T Consensus 233 ~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~------gillI~DEV~TGfGRt--G~~~a~e~~gv~PDiv~~ 304 (472)
T PRK08742 233 SPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAH------GAFLIADEIATGFGRT--GTLFACEQAGVMPDLLCL 304 (472)
T ss_pred CCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCCC--ccchHHHhcCCCCCEEEE
Confidence 3455555543 24444654 2378999999999 9999999998775331 000001111114677776
Q ss_pred cCCcCCCCCc-CeeEEEEeC
Q 018437 274 SGHKYGLVYA-GVGWVVWRT 292 (356)
Q Consensus 274 ~~hK~l~~P~-g~g~l~~~~ 292 (356)
-|.+.+.+ ..|.++.++
T Consensus 305 --gKgl~gG~~Plaav~~~~ 322 (472)
T PRK08742 305 --SKGLTGGFLPLSAVLATQ 322 (472)
T ss_pred --cccccCCCCCcceeeccH
Confidence 58776554 577777764
No 373
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.34 E-value=5.1e-06 Score=78.59 Aligned_cols=221 Identities=12% Similarity=-0.051 Sum_probs=130.2
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHH
Q 018437 92 VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA 171 (356)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~ 171 (356)
+...+-+++.+.+|+++|.+. ..+|..| -..|.+.+-++..+ +..|+.-+..|.|+...|
T Consensus 179 G~~~~hkelE~l~A~f~g~e~------a~vF~mG-f~TNs~~~p~l~~~-------------gsLIiSDelNHaSi~~Ga 238 (519)
T KOG1357|consen 179 GTTEEHKELEELVARFLGVED------AIVFSMG-FATNSMNIPSLLGK-------------GSLIISDELNHASLITGA 238 (519)
T ss_pred ccHHHHHHHHHHHHHhcCCcc------eEEEecc-ccccccCcceeecC-------------Ccceeeccccchheeccc
Confidence 666777788888999999985 2455554 33343444333322 356777788999999999
Q ss_pred HhhCCeeEEEEecCCccccCHHHHHHHHhh-------Cc-----eEEEEe-cCCCcccccCCHHHHHHHHHHhhhccCCC
Q 018437 172 RYFEVELKEVKLEEGYYVMNPVKAVELVDE-------NT-----ICVAAI-LGSTLTGEFEDVKLLHDLLTKKNEETGWD 238 (356)
Q Consensus 172 ~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-------~~-----~~v~~~-~~~~~tG~~~~i~~I~~i~~~~~~~~~~~ 238 (356)
++-|+.++...-+ |.+.||+.+.+ +| +++++. .-...-|.+.++.++..++|++ .
T Consensus 239 RLSgAtiRVfkHN------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkky------k 306 (519)
T KOG1357|consen 239 RLSGATTRVFRHN------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKY------K 306 (519)
T ss_pred cccCceEEEEecC------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccc------c
Confidence 9999998877643 34445554432 21 333333 3334678999999999999999 9
Q ss_pred CcEEEecccccccccccCCC--CcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccc
Q 018437 239 TPIHVDAASGGFIAPFLYPD--LEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTL 316 (356)
Q Consensus 239 ~~l~vD~a~~~~~~~~~~~~--~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (356)
.+++.|+|+..+..+-...- .-+......+|.+.-.+-|.+++- -|.+ ..+++. .+.+.....+.-+.
T Consensus 307 ayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~--GGyi-agsk~l-id~lrt~s~~~~ya------ 376 (519)
T KOG1357|consen 307 AYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAA--GGYI-AGSKEL-IDYLRTPSPSALYA------ 376 (519)
T ss_pred EEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhcccc--ccee-cCcHHH-HhhhccCCCceeec------
Confidence 99999999987665311100 001111234677777777876432 1343 333222 12211111111111
Q ss_pred cCCCChhHHHHHHHHHHHh----CHHHHHHHHHHHHhccCccc
Q 018437 317 NFSKGSSQIIAQYYQFIRL----GFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 317 ~~tr~~~~~~~~~~~l~~l----g~~G~~~~~~~~~~~a~~l~ 355 (356)
-+-+...+-....+++.+ |.++-++.+++..++.+|++
T Consensus 377 -t~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr 418 (519)
T KOG1357|consen 377 -TSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFR 418 (519)
T ss_pred -ccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHH
Confidence 112222233334555543 45667888888898888875
No 374
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.32 E-value=9.2e-05 Score=73.14 Aligned_cols=200 Identities=10% Similarity=-0.007 Sum_probs=109.0
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCe-EEeCChhHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVG-VGTVGSSEAIMLAGLAFKRKWQQKR 145 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~-~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (356)
+.+|.+.+++.+.+......... ......+.++.+.+.+++..... .... .++++||||+..|++.++..
T Consensus 74 H~~p~v~~Ai~~q~~~~~~~~~~-~~~~~~~~~lAe~L~~~~p~~~~---~~~~~f~~~SGsEAve~AlklAr~~----- 144 (459)
T PRK06931 74 HNHPDVLQSIQDVLTSGLPLHTL-DLTTPLKDAFSEYLLSLLPGQGK---EYCLQFTGPSGADAVEAAIKLAKTY----- 144 (459)
T ss_pred CCCHHHHHHHHHHHhhhcccccc-ccCCHHHHHHHHHHHHhCCCccc---cceEEEeCCCcHHHHHHHHHHHHHh-----
Confidence 34578888888776542211111 11234555677778877643210 0123 45579999999999999864
Q ss_pred HhcCCCCCCCeEEecCCC-cchHHHHHHhhC------------CeeEEEEecCCccc--------cCHHHH----HHHHh
Q 018437 146 KEQGKPYDKPNIVTGANV-QVCWEKFARYFE------------VELKEVKLEEGYYV--------MNPVKA----VELVD 200 (356)
Q Consensus 146 ~~~g~~~~~~~vi~s~~~-h~s~~~~~~~~G------------~~v~~v~~~~~~~~--------~d~~~L----~~~i~ 200 (356)
.| +.+|+.-..+ |-...-+....| -++..+|.... ++ -+.+.+ ++.++
T Consensus 145 --tg----r~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (459)
T PRK06931 145 --TG----RSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHE-YRCPLGIGGEAGVKALTYYFENFIE 217 (459)
T ss_pred --cC----CCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCcc-ccccccCCchhHHHHHHHHHHHHHH
Confidence 11 3556654444 433322222211 12445554321 11 123333 33333
Q ss_pred h------CceEEEEecCCCcccccC----CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceE
Q 018437 201 E------NTICVAAILGSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKS 270 (356)
Q Consensus 201 ~------~~~~v~~~~~~~~tG~~~----~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds 270 (356)
. +..+|++--.....|.+- -++++.++|++| |+++|+|+++.|+... ..-..+...--..|.
T Consensus 218 ~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~------g~LlI~DEV~tGfGRt--G~~~a~~~~gv~PDi 289 (459)
T PRK06931 218 DVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKH------GILLIVDEVQAGFART--GKMFAFEHAGIEPDI 289 (459)
T ss_pred hhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEecchhcCCcC--chHHHhhhcCCCCCE
Confidence 1 355666654444445542 278999999999 9999999998775321 000001111114677
Q ss_pred EEEcCCcCCCCCcCeeEEEEeC
Q 018437 271 INVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 271 ~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
+++ -|.+.+...+|.++.++
T Consensus 290 vt~--gK~l~gG~Pi~av~~~~ 309 (459)
T PRK06931 290 IVM--SKAVGGGLPLAVLGIKK 309 (459)
T ss_pred EEe--cccccCCcceeeeeeHH
Confidence 775 57766667778877654
No 375
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=98.32 E-value=2.4e-06 Score=81.44 Aligned_cols=183 Identities=11% Similarity=0.106 Sum_probs=123.9
Q ss_pred CCeEEecCCCcchH-HHHHHhhCCeeEEEEe--cCC----ccccCHHHHHHHHhh------CceEEEEecCCCcccccCC
Q 018437 154 KPNIVTGANVQVCW-EKFARYFEVELKEVKL--EEG----YYVMNPVKAVELVDE------NTICVAAILGSTLTGEFED 220 (356)
Q Consensus 154 ~~~vi~s~~~h~s~-~~~~~~~G~~v~~v~~--~~~----~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~ 220 (356)
.|.+++|+..|.-. ..+|+.+|+.-..|.+ +.+ .|+||.-.+++.|++ +|.+++...+.+..|..|.
T Consensus 231 aPt~YiS~alh~~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnDm 310 (838)
T KOG0630|consen 231 APTFYISEALHMDLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDM 310 (838)
T ss_pred CceEEEcccccHHHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHH
Confidence 57899999999764 4566778987443332 221 269999999999975 4778889999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCcccc
Q 018437 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDEL 300 (356)
Q Consensus 221 i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~ 300 (356)
+-+|.++|+++. .+|+|.-|-- ...+.|..|+.........+||++++.--|++.|.-.-+++-|.-+-. ..
T Consensus 311 i~kildi~eaha-----kfWLHasGha-iAALt~aepnnil~HV~eqldSMal~ialWLGiPSaPiV~LHRPleg~--aa 382 (838)
T KOG0630|consen 311 ILKILDICEAHA-----KFWLHASGHA-IAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSAPIVLLHRPLEGS--AA 382 (838)
T ss_pred HHHHHHHHHHhh-----heeEeeccch-hhheeecCcccchhHHHHHHhhccchhHHHhCCCCCceEEeecccccc--cc
Confidence 999999999993 3999987632 111222222211111145689999999999998876555554421110 00
Q ss_pred ccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 301 VFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
..|. .++- .++ -..++.+|.+++.+|..-+.++++....+++.|
T Consensus 383 ---Safe----sdpi--~re-kLdaLp~Wta~q~LggKaIadmienAFll~kil 426 (838)
T KOG0630|consen 383 ---SAFE----SDPI--LRE-KLDALPLWTALQALGGKAIADMIENAFLLCKIL 426 (838)
T ss_pred ---hhcc----cChH--HHH-hhccchHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 0011 1111 122 224899999999999999999999988777654
No 376
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.28 E-value=5.6e-05 Score=74.03 Aligned_cols=204 Identities=10% Similarity=-0.082 Sum_probs=110.7
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+..|.+.+++.+.++....... .....+.+.++.+.+.+++..+. ....++++|+||+..|++.++.....+
T Consensus 60 h~~p~v~~ai~~q~~~~~~~~~-~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGseAve~AlklAr~~~~~~-- 131 (429)
T PRK06173 60 YNHPRLNAAATNQLAKMSHIMF-GGFTHEPAVELAQKLLEILPPSL-----NKIFFADSGSVAVEVAMKMALQYQQAK-- 131 (429)
T ss_pred CCCHHHHHHHHHHHHhcCCccc-cccCCHHHHHHHHHHHhhCCCCc-----CEEEEeCCchHHHHHHHHHHHHHHHHh--
Confidence 3457888888877764322111 11112334466677777763221 247899999999999999998753221
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHHhhC-------------CeeEEEEecCCc-----cccCHHHHHHHHh---hCce
Q 018437 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFE-------------VELKEVKLEEGY-----YVMNPVKAVELVD---ENTI 204 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~-~h~s~~~~~~~~G-------------~~v~~v~~~~~~-----~~~d~~~L~~~i~---~~~~ 204 (356)
|.. .+.+|+.-.. .|-...-+....| -.+..+|..... ..-+++.|++.+. ++..
T Consensus 132 --g~~-~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~iA 208 (429)
T PRK06173 132 --GEV-QRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDEIA 208 (429)
T ss_pred --CCC-CCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCCcEE
Confidence 111 1345655444 4432221211111 013344432110 0124677888885 3455
Q ss_pred EEEEecC-CCccccc----CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCC-cccccCCCceEEEEcCCcC
Q 018437 205 CVAAILG-STLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWDFRLPLVKSINVSGHKY 278 (356)
Q Consensus 205 ~v~~~~~-~~~tG~~----~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~Ds~~~~~hK~ 278 (356)
+|++.-. ....|.+ +-++++.++|++| |+++++|+++.|+.. .... ..+..--..|.++ .-|.
T Consensus 209 Avi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~------g~llI~DEv~tG~Gr---tG~~~a~~~~gv~PDiv~--~gK~ 277 (429)
T PRK06173 209 ALILEPVVQGAGGMYFYSPTYLVKARELCDQY------GVLLIFDEIATGFGR---TGKLFALEHAGVVPDIMC--IGKA 277 (429)
T ss_pred EEEEcchhhccCCcccCCHHHHHHHHHHHHHc------CCeEEecchhcCCCc---CCcchHHHhcCCCCCEEE--eehh
Confidence 5655542 4444554 3378999999999 999999999866321 1100 0111111357666 4687
Q ss_pred CCCCc-CeeEEEEeC
Q 018437 279 GLVYA-GVGWVVWRT 292 (356)
Q Consensus 279 l~~P~-g~g~l~~~~ 292 (356)
+++.+ .+|.++.++
T Consensus 278 l~gG~~p~~a~~~~~ 292 (429)
T PRK06173 278 LTGGYLTLSATITTE 292 (429)
T ss_pred hhCCccccceEEecH
Confidence 65553 466666654
No 377
>PRK06148 hypothetical protein; Provisional
Probab=98.27 E-value=9.7e-05 Score=79.66 Aligned_cols=196 Identities=10% Similarity=0.008 Sum_probs=110.4
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.+..-..+. .+ ..+.+.++.+.+++++..+. ....++++||||+..|++.+|..
T Consensus 639 ~hp~v~~Ai~~q~~~l~~~~-~~--~~~~~~~lAe~L~~~~p~~~-----~~v~f~nSGsEA~e~AlklAr~~------- 703 (1013)
T PRK06148 639 AHPRVVAAAARQAARLNTNT-RY--LHDAIVAYAERLTATLPDGL-----TVAFFVNSGSEANSLALRLARAH------- 703 (1013)
T ss_pred CCHHHHHHHHHHHhhcCCcC-Cc--CCHHHHHHHHHHHHhCCCCc-----CEEEEeCCcHHHHHHHHHHHHHh-------
Confidence 35788888877665421111 11 12344466677777764321 23789999999999999999864
Q ss_pred cCCCCCCCeEEecCCC-cchHHHHHHhh--------C----CeeEEEEecCC---ccc-cC-------HHHHHHHHh---
Q 018437 148 QGKPYDKPNIVTGANV-QVCWEKFARYF--------E----VELKEVKLEEG---YYV-MN-------PVKAVELVD--- 200 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~-h~s~~~~~~~~--------G----~~v~~v~~~~~---~~~-~d-------~~~L~~~i~--- 200 (356)
.| +.+||.-..+ |-...-+.... + -.+..++.... .+. -| .+.+++.+.
T Consensus 704 tG----r~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 779 (1013)
T PRK06148 704 TG----QRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMA 779 (1013)
T ss_pred cC----CCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhh
Confidence 11 3455554433 43222111111 1 11222222100 011 01 234555553
Q ss_pred ---hCceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCC-CcccccCCCceEEE
Q 018437 201 ---ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD-LEWDFRLPLVKSIN 272 (356)
Q Consensus 201 ---~~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~~~~~~~~~Ds~~ 272 (356)
+++.+|++--....-|.+-+ ++++.++|+++ |+++|+|+++.|+.. .... ..+...--..|.++
T Consensus 780 ~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~------g~llI~DEVqtGfGR--tG~~~~a~e~~gv~PDivt 851 (1013)
T PRK06148 780 AKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAA------GGVCIADEVQVGFGR--VGSHWWAFETQGVVPDIVT 851 (1013)
T ss_pred ccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHh------CCEEEEEecccCCCC--CCCcchhhhhcCCCcceee
Confidence 24566666655555566654 89999999999 999999999976532 1100 00111111367777
Q ss_pred EcCCcCCCCCcCeeEEEEeC
Q 018437 273 VSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 273 ~~~hK~l~~P~g~g~l~~~~ 292 (356)
+ -|.+++...+|.++.++
T Consensus 852 ~--gK~lggG~Plgav~~~~ 869 (1013)
T PRK06148 852 M--GKPIGNGHPMGAVVTTR 869 (1013)
T ss_pred e--cccccCCcceEEEEEcH
Confidence 5 58877778889998864
No 378
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.25 E-value=8.6e-06 Score=73.35 Aligned_cols=155 Identities=14% Similarity=0.086 Sum_probs=107.1
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-ecCCCcchHHHH
Q 018437 92 VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIV-TGANVQVCWEKF 170 (356)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi-~s~~~h~s~~~~ 170 (356)
+...||+- +|+.||.+.. ....-+. +||.|+..++....++ +++++ +...-|-.....
T Consensus 66 GRdtLe~v----yA~vf~aE~a---~VRpq~i-sGTHAI~~aLfg~LRp-------------gDell~i~G~PYDTLeev 124 (416)
T COG4100 66 GRDTLERV----YAQVFGAEAA---LVRPQII-SGTHAIACALFGILRP-------------GDELLYITGSPYDTLEEV 124 (416)
T ss_pred chhHHHHH----HHHHhccccc---eeeeeee-cchhHHHHHHHhccCC-------------CCeEEEecCCcchhHHHH
Confidence 44445543 8999999862 1333444 4589999998877654 45443 333333333333
Q ss_pred H----------HhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEec----CCCcccccCCHHHHHHHHHHhhhccC
Q 018437 171 A----------RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAIL----GSTLTGEFEDVKLLHDLLTKKNEETG 236 (356)
Q Consensus 171 ~----------~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~----~~~~tG~~~~i~~I~~i~~~~~~~~~ 236 (356)
. +-+|++.+.||+..+ +.+|.+.+++++.++|++|.+.- ..-|+-.+++|+++.++.|+.++
T Consensus 125 IG~rg~~~gSL~dfgi~Y~~v~Lt~~-gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inp--- 200 (416)
T COG4100 125 IGLRGEGQGSLKDFGIKYKAVPLTAD-GKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINP--- 200 (416)
T ss_pred hccCCCCcccHHHhCcceeecccccC-CcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCC---
Confidence 2 234667888999875 99999999999999999887653 44555667888888888888754
Q ss_pred CCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCC
Q 018437 237 WDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG 279 (356)
Q Consensus 237 ~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l 279 (356)
++.+.||.|||.|+-. ..+. .-++|.+.-|.=|.-
T Consensus 201 -n~ivFVDNCYGEFvE~----~EPt---~vGaDliAGSLIKNp 235 (416)
T COG4100 201 -NVIVFVDNCYGEFVEE----KEPT---HVGADLIAGSLIKNP 235 (416)
T ss_pred -CEEEEEeccchhhhhc----cCcc---ccchhhhccceeeCC
Confidence 8999999999987651 1112 238999998888873
No 379
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.24 E-value=3.6e-05 Score=74.33 Aligned_cols=248 Identities=13% Similarity=-0.005 Sum_probs=128.1
Q ss_pred CChHHHHHHHHHHhcccCCC-cccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVD-MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~-~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (356)
+..+.+.+++.+-+++-.+. ........ -.++.++|+++..-.. -..+.+|.|||+|+-.|++.++.+|..+
T Consensus 60 h~~~~i~~Ai~~Q~~~l~~~~~~~~t~~P--a~~LA~~L~~~aP~~~----l~~vFf~~sGSeAvEtAlKma~qY~~~~- 132 (449)
T COG0161 60 HGRPEIAEAIKKQLDKLPHVMFGGFTHEP--AIELAEKLAELAPEGG----LDHVFFTDSGSEAVETALKMALQYWRAR- 132 (449)
T ss_pred cCCHHHHHHHHHHHHhCCchhhcccCCch--HHHHHHHHHHhCCCCC----ccEEEEeCCchHHHHHHHHHHHHHHHhc-
Confidence 44578888887665542222 11111222 2256677888876210 1348999999999999999999988643
Q ss_pred HhcCCCCCCCeEEecCC-CcchHHHHHHhhC-------------CeeEEEEecC-------Cccc----cCHHHHHHHHh
Q 018437 146 KEQGKPYDKPNIVTGAN-VQVCWEKFARYFE-------------VELKEVKLEE-------GYYV----MNPVKAVELVD 200 (356)
Q Consensus 146 ~~~g~~~~~~~vi~s~~-~h~s~~~~~~~~G-------------~~v~~v~~~~-------~~~~----~d~~~L~~~i~ 200 (356)
|.+. +.++|.-.. .|-+..-++...| .++..+|... +.+. -..++|++.|.
T Consensus 133 ---G~p~-r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~ 208 (449)
T COG0161 133 ---GQPQ-RKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALIL 208 (449)
T ss_pred ---CCCc-ceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHH
Confidence 3222 234554333 3433333333222 1233444321 0011 23567777776
Q ss_pred h---Cc-eEEEEecCCCc-ccccC----CHHHHHHHHHHhhhccCCCCcEEEeccccccccc---ccCCCCcccccCCCc
Q 018437 201 E---NT-ICVAAILGSTL-TGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP---FLYPDLEWDFRLPLV 268 (356)
Q Consensus 201 ~---~~-~~v~~~~~~~~-tG~~~----~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~---~~~~~~~~~~~~~~~ 268 (356)
+ ++ .++++--..-- .|.+- =++++.++|++| |+++|.|++..||... |.+.+ ..+ .-
T Consensus 209 ~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky------~ILlI~DEV~tGFGRTG~~FA~e~--~gi---~P 277 (449)
T COG0161 209 EHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKY------GILLIADEVATGFGRTGKMFACEH--AGI---VP 277 (449)
T ss_pred hcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHc------CcEEEeecceeCCCcCchhhhhhh--cCC---CC
Confidence 4 33 34443333333 34443 279999999999 9999999998775431 11111 111 34
Q ss_pred eEEEEcCCcCCCCCc-CeeEEEEeCCCCCccccccc-cCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHH
Q 018437 269 KSINVSGHKYGLVYA-GVGWVVWRTKDDLPDELVFH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFI 345 (356)
Q Consensus 269 Ds~~~~~hK~l~~P~-g~g~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~ 345 (356)
|.++++ |.+.+.+ ..|.++++++ .. +.+... ..-+.+ -+|+ |-+....++..+.|+.+-++++.+..+
T Consensus 278 Di~~~a--KGLT~GY~Pl~a~l~~~~-I~-~~~~~~~~~~f~H---G~TY--sghPlacAaAla~L~i~e~e~l~~~~~ 347 (449)
T COG0161 278 DILCLA--KGLTGGYLPLSAVLTSDR-IY-EAFSDGDAGAFMH---GHTY--SGNPLACAAALANLDILEEEDLLERVA 347 (449)
T ss_pred Ceeeec--ccccccchhhHhHhhhHH-HH-HHHhcccCCeecc---CCcc--ccCHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 666654 6543322 3455555543 21 222111 111111 1222 222333455557777777676544433
No 380
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=98.19 E-value=0.00012 Score=71.93 Aligned_cols=143 Identities=13% Similarity=0.051 Sum_probs=79.9
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCC-CCCeEEecCC-CcchHHHHHHhhCC
Q 018437 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPY-DKPNIVTGAN-VQVCWEKFARYFEV 176 (356)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~-~~~~vi~s~~-~h~s~~~~~~~~G~ 176 (356)
++.+.++++.+.+. .....++++||||+..|++.++....+.....|.+. .+.+|+.-.. .|-...-+....|-
T Consensus 89 ~l~~~l~~~~~~~~----~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~ 164 (431)
T TIGR03251 89 RFVDTFARVLGDPA----LPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNT 164 (431)
T ss_pred HHHHHHHHhcCCCC----cCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCC
Confidence 44455666542111 124789999999999999999875211111122111 1235555443 44333222222221
Q ss_pred e-e----------EEEE-------ecCCcc-------ccCHHHHHHHHh---hCceEEEEecCCCccccc----CCHHHH
Q 018437 177 E-L----------KEVK-------LEEGYY-------VMNPVKAVELVD---ENTICVAAILGSTLTGEF----EDVKLL 224 (356)
Q Consensus 177 ~-v----------~~v~-------~~~~~~-------~~d~~~L~~~i~---~~~~~v~~~~~~~~tG~~----~~i~~I 224 (356)
. . ..++ .+.... .-+++++++.+. +++.+|++.-.....|.+ +.+++|
T Consensus 165 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l 244 (431)
T TIGR03251 165 DPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAM 244 (431)
T ss_pred ccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHH
Confidence 1 0 0011 110000 013455566664 456778877666666765 468999
Q ss_pred HHHHHHhhhccCCCCcEEEeccccccc
Q 018437 225 HDLLTKKNEETGWDTPIHVDAASGGFI 251 (356)
Q Consensus 225 ~~i~~~~~~~~~~~~~l~vD~a~~~~~ 251 (356)
.++|++| |+++++|+++.|+.
T Consensus 245 ~~lc~~~------g~llI~DEV~tG~G 265 (431)
T TIGR03251 245 RALCDEH------DALLIFDEVQTGVG 265 (431)
T ss_pred HHHHHHc------CCEEEEecchhccC
Confidence 9999999 99999999998643
No 381
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.14 E-value=0.00016 Score=66.14 Aligned_cols=171 Identities=15% Similarity=0.113 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecC-CCcc---------
Q 018437 96 LQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA-NVQV--------- 165 (356)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~-~~h~--------- 165 (356)
..-+..+.+.+++|.+. ..-+..|.||+-.|+..+|...-.. ++.+..+.+|+... ..|-
T Consensus 102 ~~~~f~~~vt~lf~~~k-------vlpmnTGaEa~Eta~KLaR~wgy~~---K~ip~nka~il~~~~nFhGrT~~ais~s 171 (427)
T KOG1402|consen 102 VLGEFAEYVTKLFGYDK-------VLPMNTGAEAVETACKLARKWGYRK---KNIPKNKAKILSAENNFHGRTLGAISLS 171 (427)
T ss_pred hHHHHHHHHHHhcCcce-------eeecccchhHHHHHHHHHHHHHHhh---ccCCccceeEEEecccccCceeeeEEec
Confidence 33455677999999986 5556667999999999887542111 11121122333222 2221
Q ss_pred ----hHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh-CceEEEEecCCCcccccCC----HHHHHHHHHHhhhccC
Q 018437 166 ----CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETG 236 (356)
Q Consensus 166 ----s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~ 236 (356)
++...--.+-..+..||.+ |.++|+.+++. +.+++++---.-.-|++-| ++++.++|++|
T Consensus 172 ~d~ds~~~fgp~~P~~~~~v~Y~------d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtky----- 240 (427)
T KOG1402|consen 172 TDPDSWDGFGPFLPGVVDKVPYG------DAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKY----- 240 (427)
T ss_pred CCcchhhccCCCCCCcceeeccC------CHHHHHHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhh-----
Confidence 2222211111224555543 67999999976 4455555555666777633 79999999999
Q ss_pred CCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCC-CcCeeEEEEeC
Q 018437 237 WDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLV-YAGVGWVVWRT 292 (356)
Q Consensus 237 ~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~-P~g~g~l~~~~ 292 (356)
+++++.|+.|.|.... ..-...+...-.-|.+.+ .|.+.+ -+..+.+++.+
T Consensus 241 -nvl~I~DEvQTGl~RT--Gk~la~d~env~PDivil--gKalSGG~~Pvsavl~~~ 292 (427)
T KOG1402|consen 241 -NVLLIADEVQTGLART--GKLLACDYENVRPDIVIL--GKALSGGVYPVSAVLADD 292 (427)
T ss_pred -cEEEEehhhhhccccc--CcEEEeehhhcCCCeEEE--eccccCCeeeeEEEEecH
Confidence 9999999999874331 111112222224465553 465433 34556665543
No 382
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.04 E-value=0.00062 Score=64.12 Aligned_cols=206 Identities=10% Similarity=-0.053 Sum_probs=114.8
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+..|++.+++.+-++.-.+....+-....+ ++.+.+.+..+-.. ...+.++.+|||||..||..+|+....+
T Consensus 72 hanpev~ral~~q~~k~~hs~~~~~t~eav--~l~~~l~~~~~~~~----~~rvff~nsGTeAne~ALK~Ark~~~~~-- 143 (433)
T KOG1401|consen 72 HANPEVARALAEQAKKLGHSSNGYFTLEAV--ELEEVLSAVLGKGS----AERVFFCNSGTEANETALKFARKFTGKK-- 143 (433)
T ss_pred CCCHHHHHHHHHHHhhheeccCccccHHHH--HHHHHHHhcccCCC----ccEEEEecCCcHHHHHHHHHHHHhhccc--
Confidence 345888888876665422111111111111 22233444443322 1347899999999999999998753211
Q ss_pred hcCCCCCCCeEEe-cCCCcchHHHHHHhhCCeeEEEEecC---C--c-cccCHHHHHHHHhhCc---eEEEEecCCCccc
Q 018437 147 EQGKPYDKPNIVT-GANVQVCWEKFARYFEVELKEVKLEE---G--Y-YVMNPVKAVELVDENT---ICVAAILGSTLTG 216 (356)
Q Consensus 147 ~~g~~~~~~~vi~-s~~~h~s~~~~~~~~G~~v~~v~~~~---~--~-~~~d~~~L~~~i~~~~---~~v~~~~~~~~tG 216 (356)
.+..+..+|. -...|-.-.-++...+.....+|.++ + . ---|..+|++.++... .+|++--..-.-|
T Consensus 144 ---~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG 220 (433)
T KOG1401|consen 144 ---HPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGG 220 (433)
T ss_pred ---CCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCCC
Confidence 1111223554 44455444444443333322222211 0 0 1126889999997643 5666666665544
Q ss_pred cc--CC--HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 217 EF--ED--VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 217 ~~--~~--i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
.+ +| +..|.++|+++ ++++|.|+++.|+.. ......+..--..-|.++ .-|.+.+....|..++++
T Consensus 221 ~~p~~peFl~~L~k~C~~~------~vl~I~DEV~tG~gR--~g~~~a~e~~~~~PDI~t--~aK~L~gGlPigA~~v~~ 290 (433)
T KOG1401|consen 221 IIPADPEFLIGLRKECDDN------GVLLIFDEVQTGLGR--LGYGWAQEYFGVTPDITT--VAKPLGGGLPIGATGVRD 290 (433)
T ss_pred cccCCHHHHHHHHHHHhhc------CceEEeehhhhCccc--cchHHHHHHhCcCCccee--ehhhccCCceeEEEeehH
Confidence 44 32 57889999999 999999999987543 211111111111345555 458877778889999987
Q ss_pred C
Q 018437 293 K 293 (356)
Q Consensus 293 ~ 293 (356)
+
T Consensus 291 k 291 (433)
T KOG1401|consen 291 K 291 (433)
T ss_pred H
Confidence 5
No 383
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.03 E-value=0.00034 Score=68.80 Aligned_cols=173 Identities=12% Similarity=0.023 Sum_probs=91.2
Q ss_pred ChHHHHH--HHHHHhcccCC-CcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q 018437 68 MEPECDK--LVMASINKNYV-DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (356)
Q Consensus 68 ~~~~v~~--~i~~~~~~~~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (356)
.+|.+.+ ++.+.+..-.. .........+...++.+.++++.+ +.. ...+.++++|+||+..|++.++......
T Consensus 62 ~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~-p~~---~~~v~f~~SGsEAve~AlKlAr~~~~~~ 137 (443)
T PRK08297 62 NHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLG-DPE---LPHLFFVDGGALAVENALKVAFDWKSRK 137 (443)
T ss_pred CChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcC-CCC---CCEEEEeCchHHHHHHHHHHHHHHhhcc
Confidence 3467777 77665543110 111000111233345556666652 111 1247899999999999999998753211
Q ss_pred HHhcCCC-CCCCeEEecCC-CcchHHHHHHhhCCe-----------eEEEEecCCcc--------------ccCHHHHHH
Q 018437 145 RKEQGKP-YDKPNIVTGAN-VQVCWEKFARYFEVE-----------LKEVKLEEGYY--------------VMNPVKAVE 197 (356)
Q Consensus 145 ~~~~g~~-~~~~~vi~s~~-~h~s~~~~~~~~G~~-----------v~~v~~~~~~~--------------~~d~~~L~~ 197 (356)
+...|.+ ..+.+||.-.. .|-...-+....|.. ...+|.....+ .-|++++++
T Consensus 138 ~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (443)
T PRK08297 138 NEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARA 217 (443)
T ss_pred ccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHH
Confidence 1011210 11345665444 443333233222211 00111110000 013456667
Q ss_pred HHh---hCceEEEEecCCCccccc----CCHHHHHHHHHHhhhccCCCCcEEEecccccc
Q 018437 198 LVD---ENTICVAAILGSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGF 250 (356)
Q Consensus 198 ~i~---~~~~~v~~~~~~~~tG~~----~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~ 250 (356)
.+. +++.+|++.-....-|.+ ..+++|.++|++| |+++++|+++.|+
T Consensus 218 ~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~------g~llI~DEV~tGf 271 (443)
T PRK08297 218 AFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEH------DALLIFDEVQTGV 271 (443)
T ss_pred HHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhcc
Confidence 775 356677766555555655 5689999999999 9999999999764
No 384
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=97.93 E-value=0.00049 Score=67.85 Aligned_cols=173 Identities=12% Similarity=0.002 Sum_probs=94.8
Q ss_pred CChHHHHHHHHHH-hcccC-CCc-ccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMAS-INKNY-VDM-DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (356)
Q Consensus 67 ~~~~~v~~~i~~~-~~~~~-~~~-~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (356)
+.+|.+.+++.+. ..... ..+ ...+...++.+.+.+.+.+++.-+. ....++++|+||+..|++.++..+..
T Consensus 74 h~~p~i~~Ai~~q~~~~~l~~~~~~~~~~~~~la~~l~~~l~~~~p~~~-----~~v~f~~SGsEAvE~AlKlAr~~~~~ 148 (464)
T TIGR00699 74 YNNPALLKAAQSPEMATTLINRPALGNFPSKDWAKILKEGILKVAPKGQ-----DQVWTGMSGSDANELAFKAAFMYYRS 148 (464)
T ss_pred CCCHHHHHHHHHHHHHHhhcccccCCcHHHHHHHHHHHHhHHhhCCCCc-----CEEEEeCCcHHHHHHHHHHHHHHHHh
Confidence 3457788887753 12111 111 1112233344444443445543111 24789999999999999999875432
Q ss_pred H-HHh----cCC---------CCC--CCeEEecCC-CcchHHHHHHhhCC-----------eeEEEEecCCcc-------
Q 018437 144 K-RKE----QGK---------PYD--KPNIVTGAN-VQVCWEKFARYFEV-----------ELKEVKLEEGYY------- 188 (356)
Q Consensus 144 ~-~~~----~g~---------~~~--~~~vi~s~~-~h~s~~~~~~~~G~-----------~v~~v~~~~~~~------- 188 (356)
. |.. .|. ..+ +.+||.-.. .|-...-+....|- .+..+|.....+
T Consensus 149 ~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~ 228 (464)
T TIGR00699 149 KQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVK 228 (464)
T ss_pred cCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccc
Confidence 1 000 000 001 125665444 45443333333221 122333221000
Q ss_pred ------ccCHHHHHHHHhh---CceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccc
Q 018437 189 ------VMNPVKAVELVDE---NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGF 250 (356)
Q Consensus 189 ------~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~ 250 (356)
.-+++.|++++.+ ++.+|++--.....|.+-+ +++|.++|++| |+++++|+++.|+
T Consensus 229 ~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~------g~lLI~DEV~tGf 297 (464)
T TIGR00699 229 ENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKH------NVAFIVDEVQTGV 297 (464)
T ss_pred cchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeeeeeCC
Confidence 1135667777753 4667777766666677766 99999999999 9999999998764
No 385
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.92 E-value=0.00051 Score=68.02 Aligned_cols=274 Identities=14% Similarity=0.067 Sum_probs=145.3
Q ss_pred CCCCCHHHHHHHHHHHhhhcCCCC-cccccccCCCChHHHHHHHHHH---hcc-cCCCcccCcchHHHHHHHHHHHHHHh
Q 018437 34 DNSMPKEAAYQVINDELMLDGNPR-LNLASFVTTWMEPECDKLVMAS---INK-NYVDMDEYPVTTELQNRCVNMIAHLF 108 (356)
Q Consensus 34 ~~~~~~~~i~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~v~~~i~~~---~~~-~~~~~~~~~~~~~le~~~~~~la~l~ 108 (356)
+.+..+.++++.++++...+.-.+ |.-.+|..+..++.+..-+.+. +.+ .+++++.+++..+-.-..+.+++++.
T Consensus 97 ~~~~~E~eml~~l~~ia~kNk~~ksfIGmGYyn~~vP~~I~RNilenp~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dlT 176 (1001)
T KOG2040|consen 97 DKPLCESEMLQHLEDIASKNKIWKSFIGMGYYNTHVPAVILRNILENPGWYTQYTPYQAEISQGRLESLLNYQTMITDLT 176 (1001)
T ss_pred CCCcCHHHHHHHHHHHHhhhhHHHHhhccccccccCcHHHHHHhhhCCcceeccCCCchhhhhhhHHHHhhhHHhhhhcc
Confidence 457889999999988776543111 1111333344444433222111 111 22333445565555556788999999
Q ss_pred CCCCCCCCCCCeEEeCChh---HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHH----hhCCeeEEE
Q 018437 109 NTPVADDKTAVGVGTVGSS---EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFAR----YFEVELKEV 181 (356)
Q Consensus 109 g~~~~~~~~~~~~~t~Ggt---~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~----~~G~~v~~v 181 (356)
|++..+ ...---|| ||+.++...-+ +.+.++....|+.....++ -+|+++...
T Consensus 177 GL~~aN-----ASLLDEgTAaaEAm~l~~~~~k---------------rkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~ 236 (1001)
T KOG2040|consen 177 GLPMAN-----ASLLDEGTAAAEAMALCNRINK---------------RKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVS 236 (1001)
T ss_pred CCcccc-----hhhhccchhHHHHHHHHHhhcc---------------cceEEecCCCCcchhhhhhccccccceeEEec
Confidence 999733 22222223 33333222111 3468888999987665555 234443333
Q ss_pred EecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcc
Q 018437 182 KLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 261 (356)
Q Consensus 182 ~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~ 261 (356)
+.. +. ....++...|.+.+|.+. |.+.|.+++++.++.. +..+++-.-.-. +..+++ +-
T Consensus 237 ~~~---------~~-~~s~~~v~gvlvQYP~t~-G~i~d~~el~~~a~~~------~s~vv~atDLLa--LtiLrp--Pg 295 (1001)
T KOG2040|consen 237 DIK---------EA-DYSSKDVSGVLVQYPDTE-GSVLDFDELVELAHAN------GSLVVMATDLLA--LTILRP--PG 295 (1001)
T ss_pred CHH---------Hh-hccccceeEEEEEcCCCC-CcccCHHHHHHHhhcc------CceEEEeehhhH--HHccCC--hh
Confidence 221 11 112345678999999998 9999999999999999 776555322221 111222 22
Q ss_pred cccCCCceEEEEcCCcCCCCCcC-----eeEEEEeCCCCCccccccc-----cCCCC----------------CCCCCcc
Q 018437 262 DFRLPLVKSINVSGHKYGLVYAG-----VGWVVWRTKDDLPDELVFH-----INYLG----------------SDQPTFT 315 (356)
Q Consensus 262 ~~~~~~~Ds~~~~~hK~l~~P~g-----~g~l~~~~~~~~~~~~~~~-----~~~~~----------------~~~~~~~ 315 (356)
. .|+|...-|++.++ +|.| .|++.+++. +.+.++-. ..-.+ ....+.
T Consensus 296 e---fGaDIavGSsQRFG-VPlGYGGPHAaFfAv~~~--l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATS- 368 (1001)
T KOG2040|consen 296 E---FGADIAVGSSQRFG-VPLGYGGPHAAFFAVSES--LVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATS- 368 (1001)
T ss_pred h---cCceeeeccccccC-ccccCCCchHHHHHHHHH--HHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccch-
Confidence 3 38999998888874 5543 444444321 11110000 00000 000011
Q ss_pred ccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 316 LNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 316 ~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
-.||-++.-+--...+.-++|.+|++++.++....+-+|+
T Consensus 369 NICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~ 408 (1001)
T KOG2040|consen 369 NICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILA 408 (1001)
T ss_pred hhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHH
Confidence 1144444322222234456899999999999887766553
No 386
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=97.85 E-value=0.00094 Score=62.79 Aligned_cols=179 Identities=17% Similarity=0.059 Sum_probs=94.1
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCC----CCCCCeEEecCCCcchHHHHHHhh
Q 018437 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGK----PYDKPNIVTGANVQVCWEKFARYF 174 (356)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~----~~~~~~vi~s~~~h~s~~~~~~~~ 174 (356)
++++.+++++|++.++ +++...+|..++.=+.+. .+.-. ..+|. ...+.+.++|.|+|-.....++.+
T Consensus 73 e~r~l~a~llgv~~~~-----viv~gNSSL~lM~d~i~~--a~~~G-~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~ 144 (425)
T PF12897_consen 73 EARELFAELLGVPPEN-----VIVGGNSSLNLMHDTISR--AMLHG-VPGSETPWCKEEKVKFLCPVPGYDRHFAITEHF 144 (425)
T ss_dssp HHHHHHHHHHTS-GGG-----EEE-SS-HHHHHHHHHHH--HHHH---TT-SS-GGGSS--EEEEEES--HHHHHHHHHC
T ss_pred HHHHHHHHHhCCCHHH-----EEEeccchHHHHHHHHHH--HHhcC-CCCCCCCchhccCceEEecCCCchHHHHHHHhh
Confidence 6677799999999732 554444444443322221 11100 00000 012358999999999999999999
Q ss_pred CCeeEEEEecCCccccCHHHHHHHHhhC--ceEEE-EecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccccc
Q 018437 175 EVELKEVKLEEGYYVMNPVKAVELVDEN--TICVA-AILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFI 251 (356)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~--~~~v~-~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~ 251 (356)
|++.+.||.+++ -.|++.+++.+.++ .+.|+ +---+||+|.+-.=+.+.+++.=.+.-+ +..+.-|.||....
T Consensus 145 Giemi~VpM~~d--GPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~--DFRI~WDNAY~vHh 220 (425)
T PF12897_consen 145 GIEMIPVPMTED--GPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAP--DFRIFWDNAYAVHH 220 (425)
T ss_dssp T-EEEEEEEETT--EE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SST--T-EEEEE-TTTT-B
T ss_pred CcEEEecCCCCC--CCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCc--CeEEEeecCceEee
Confidence 999999999875 68999999999654 34443 3445799999966666666654211111 88999999998644
Q ss_pred ccccCCCCc---cccc-------CCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 252 APFLYPDLE---WDFR-------LPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 252 ~~~~~~~~~---~~~~-------~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
+ ...... .++- .+.--.+..|..|--+...|.+++...
T Consensus 221 L--~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS 268 (425)
T PF12897_consen 221 L--YDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAAS 268 (425)
T ss_dssp S--SSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-
T ss_pred c--cccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecC
Confidence 3 111111 1110 223344556788877777777777654
No 387
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=97.80 E-value=0.00046 Score=64.60 Aligned_cols=201 Identities=14% Similarity=-0.031 Sum_probs=110.6
Q ss_pred CCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-ecCCCcchHHHHHHhhCCeeEEEEecCC----------
Q 018437 118 AVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIV-TGANVQVCWEKFARYFEVELKEVKLEEG---------- 186 (356)
Q Consensus 118 ~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi-~s~~~h~s~~~~~~~~G~~v~~v~~~~~---------- 186 (356)
....|+++|||||-+|++.++.++. .-.+| .....|-+-..++...|....+-+.+..
T Consensus 110 ~~vfF~nsGsEANelal~mar~Yt~-----------~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~P 178 (442)
T KOG1404|consen 110 KVVFFVNSGSEANELALKMARLYTG-----------NLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNP 178 (442)
T ss_pred eEEEEecCCchHHHHHHHHHHHhcC-----------CceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCC
Confidence 3489999999999999999988732 12444 4455566555555555555443332210
Q ss_pred ---c--cc-------cC--HHHHHHHHhh----CceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEe
Q 018437 187 ---Y--YV-------MN--PVKAVELVDE----NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVD 244 (356)
Q Consensus 187 ---~--~~-------~d--~~~L~~~i~~----~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD 244 (356)
. +. -| .++|++.+.. ...+.++-.-.-.-|.+.+ +++..++||++ |.+++.|
T Consensus 179 dp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~------Ggl~IaD 252 (442)
T KOG1404|consen 179 DPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKR------GGLFIAD 252 (442)
T ss_pred CcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHc------CCEEEeh
Confidence 0 00 00 1344444432 2344555555555566643 78999999999 9999999
Q ss_pred cccccccccccCCCCcccccCC--CceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCCCCh
Q 018437 245 AASGGFIAPFLYPDLEWDFRLP--LVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGS 322 (356)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~--~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~ 322 (356)
+++.|+.. .. .-+.|.-. --|.++ .-|.++.....|.+++.. +.. ..+.....+.. + . +..+.
T Consensus 253 EVqtGfGR--tG--~~wgfe~h~v~PDIvT--mAKgiGnG~Pl~AVvtt~-EIa-~v~~~~~~~fn----T--y-ggnP~ 317 (442)
T KOG1404|consen 253 EVQTGFGR--TG--HMWGFESHGVVPDIVT--MAKGIGNGFPLGAVVTTP-EIA-DVLNQKSSHFN----T--Y-GGNPV 317 (442)
T ss_pred hhhhcccc--cc--ccccccccCCCccHHH--HHhhccCCCcceeeecCH-HHH-HHHHhcccccc----c--c-CCCch
Confidence 99988654 11 12222211 123333 458877778888887753 222 22222221111 1 1 23334
Q ss_pred hHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 323 SQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 323 ~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
. .+...+.|+.+-++.+ .+++.+...||
T Consensus 318 a-~avg~aVL~Vikee~L---qE~aa~vG~yl 345 (442)
T KOG1404|consen 318 A-CAVGLAVLKVIKEENL---QENAAEVGSYL 345 (442)
T ss_pred h-HHHHHHHHHHHHHHhH---HHHHHHHHHHH
Confidence 3 3333466776665553 34445555444
No 388
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=97.65 E-value=0.0034 Score=65.99 Aligned_cols=91 Identities=11% Similarity=-0.008 Sum_probs=55.1
Q ss_pred HHHHHHHhh--------CceEEEEecC-CCcccccC----CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCC
Q 018437 193 VKAVELVDE--------NTICVAAILG-STLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL 259 (356)
Q Consensus 193 ~~L~~~i~~--------~~~~v~~~~~-~~~tG~~~----~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~ 259 (356)
+.+++.|++ +..+|++--. ...-|.+- -++.+.++|++| |+++|+|+++.|+.. .....
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~------gilLI~DEV~TGfGR--tG~~f 638 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSR------KIPVIFDEVFTGLWR--LGVES 638 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHh------CCEEEEeecccCCCc--ccchh
Confidence 556666642 3445554432 34446552 278999999999 999999999988643 11100
Q ss_pred cccccCCCceEEEEcCCcCCCCCc-CeeEEEEeCC
Q 018437 260 EWDFRLPLVKSINVSGHKYGLVYA-GVGWVVWRTK 293 (356)
Q Consensus 260 ~~~~~~~~~Ds~~~~~hK~l~~P~-g~g~l~~~~~ 293 (356)
..+..--..|.+++ -|.+.+.+ ..|.++++++
T Consensus 639 a~e~~gv~PDIi~~--gKgLtgG~~Plaa~l~~~~ 671 (817)
T PLN02974 639 AWELLGCKPDIACY--AKLLTGGLVPLAATLATEE 671 (817)
T ss_pred hHHhcCCCCCEEee--cccccCCCCccEEEEEcHH
Confidence 11111113577774 48876663 6788887653
No 389
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=97.61 E-value=0.0013 Score=59.10 Aligned_cols=259 Identities=16% Similarity=0.037 Sum_probs=145.8
Q ss_pred ccccccCCCChHHHHHHHHHHhcccCCCc---cc---CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeC-ChhHHHH
Q 018437 59 NLASFVTTWMEPECDKLVMASINKNYVDM---DE---YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTV-GSSEAIM 131 (356)
Q Consensus 59 ~l~~~~~~~~~~~v~~~i~~~~~~~~~~~---~~---~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~-Ggt~a~~ 131 (356)
|++.+-..-|.+.+.++-.+.+|-+.... +. +.....+.+.....+.+|+++|+. ..+++.- |||.-..
T Consensus 10 nFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn----~~vlf~QGGGt~qFa 85 (370)
T KOG2790|consen 10 NFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDN----YKVLFLQGGGTGQFA 85 (370)
T ss_pred ecCCCcccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCc----eeEEEEeCCCccccc
Confidence 44443333344566777777777543332 22 346677788889999999999963 3455555 4554332
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCc--cccCHHHHHHHHhhCceEEEEe
Q 018437 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGY--YVMNPVKAVELVDENTICVAAI 209 (356)
Q Consensus 132 ~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~--~~~d~~~L~~~i~~~~~~v~~~ 209 (356)
.....+.. . ..|. .-+.|++..-+--++..+-++.-...+..+..+.+ -..|.+.++. +++...|..|
T Consensus 86 Av~lNL~g-l-----K~g~--~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~--~~da~yvyyC 155 (370)
T KOG2790|consen 86 AVPLNLIG-L-----KHGR--CADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWEL--NPDASYVYYC 155 (370)
T ss_pred ccchhhhc-c-----ccCC--ccceEEeccccHHHHHHHHhhCCceEEeccccccccCcCCChhhccc--CCCccEEEEe
Confidence 22222221 0 0110 12478877777667777666533323333333221 1234444433 3455689999
Q ss_pred cCCCccccc-CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEE
Q 018437 210 LGSTLTGEF-EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWV 288 (356)
Q Consensus 210 ~~~~~tG~~-~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l 288 (356)
...|..|+= +++. +-.-+ +..++.|-.... ++. ++|+. ..+.+....+|.. +|.|.-++
T Consensus 156 aNETVHGVEf~~~P----~~~~~------~~vlVaDmSSnf-----lSr--pvDvs--k~gvi~aGAQKN~-G~aG~Tvv 215 (370)
T KOG2790|consen 156 ANETVHGVEFDFIP----VNDPK------GAVLVADMSSNF-----LSR--PVDVS--KFGVIFAGAQKNV-GPAGVTVV 215 (370)
T ss_pred cCceeeceecCCCC----CCCCC------CceEEEecccch-----hcC--Cccch--hcceEEecccccc-CccccEEE
Confidence 999998874 3333 11123 889999976543 221 45654 4577888899997 79999999
Q ss_pred EEeCCCCCccccccccCCCCCC--CCCccccCCCChhHHHHHHHHHHHhCHH-HHHHHHHHHHhccC
Q 018437 289 VWRTKDDLPDELVFHINYLGSD--QPTFTLNFSKGSSQIIAQYYQFIRLGFE-EITFTFISSLKVCP 352 (356)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~tr~~~~~~~~~~~l~~lg~~-G~~~~~~~~~~~a~ 352 (356)
++|+. ++.......+.-+.+. ..+.++..|.+...+...-..++.+-.. |++.+.+...+.++
T Consensus 216 ivr~d-llg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~Ksk 281 (370)
T KOG2790|consen 216 IVRKD-LLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSK 281 (370)
T ss_pred EEehh-hhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHH
Confidence 99874 4433333333322222 1233466788877666666666665433 45555555554444
No 390
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.19 E-value=0.0091 Score=56.15 Aligned_cols=148 Identities=13% Similarity=-0.001 Sum_probs=96.7
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCee
Q 018437 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (356)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v 178 (356)
.+-+.+++++|.+. .++-+-|-.++..++-++..+ ++.+++-...+..+++..+..--.+
T Consensus 143 dlE~~iakF~G~E~-------aivYs~gF~ti~S~ipafsKr-------------GDIi~~de~~nfaIq~GlqlSRS~i 202 (467)
T KOG1358|consen 143 DLEKRIAKFMGTED-------AIVYSYGFSTIESAIPAFSKR-------------GDIIFVDEAVNFAIQKGLQLSRSTI 202 (467)
T ss_pred ccHHHHHHhhCCcc-------eeeeccccchhhhcchhhhcc-------------CcEEEEehhhhHHHHHHHhhhhhee
Confidence 33344999999985 344444444455556555442 5788888888888888877655455
Q ss_pred EEEEecCCccccCHHHHHHHHhhC-------------ceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEec
Q 018437 179 KEVKLEEGYYVMNPVKAVELVDEN-------------TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (356)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~~-------------~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~ 245 (356)
++.. ..|.+.|+..+.+. .+.|++-.---++|.+.|+.+|.++..+| ...+++|+
T Consensus 203 ~~Fk------hndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Ky------k~RvildE 270 (467)
T KOG1358|consen 203 SYFK------HNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKY------KFRVILDE 270 (467)
T ss_pred EEec------CCCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhh------eEEEEEec
Confidence 4443 22556665554321 24677777788899999999999999999 99999999
Q ss_pred ccccccccccCCCC--cccccCCCceEEEEcCCcC
Q 018437 246 ASGGFIAPFLYPDL--EWDFRLPLVKSINVSGHKY 278 (356)
Q Consensus 246 a~~~~~~~~~~~~~--~~~~~~~~~Ds~~~~~hK~ 278 (356)
.+..+++.-...-. -+.+....+|.++.+.--.
T Consensus 271 s~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~a 305 (467)
T KOG1358|consen 271 SLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETA 305 (467)
T ss_pred ccccccccccCccccccCCCCccceeeeeeccccc
Confidence 98877664211100 1222234678888775433
No 391
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=97.17 E-value=0.0061 Score=56.37 Aligned_cols=184 Identities=17% Similarity=0.133 Sum_probs=113.9
Q ss_pred HHhhhcCCCC-ccccccc--CCC----ChHHHHHHHHHHhcccCC-CcccCcchHHHHHHHHHHHHHH-hCCCCCC--CC
Q 018437 48 DELMLDGNPR-LNLASFV--TTW----MEPECDKLVMASINKNYV-DMDEYPVTTELQNRCVNMIAHL-FNTPVAD--DK 116 (356)
Q Consensus 48 ~~~~~~~~~~-~~l~~~~--~~~----~~~~v~~~i~~~~~~~~~-~~~~~~~~~~le~~~~~~la~l-~g~~~~~--~~ 116 (356)
+.+..+.+|. .||+.+. ... ..+.|+++-.+..+.+.. .|..-.+..++.+. .+++ +|.+.+. ..
T Consensus 44 eAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~----sakLa~G~~s~~ik~~ 119 (427)
T KOG1411|consen 44 EAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKL----SAKLALGDNSPVIKEK 119 (427)
T ss_pred HHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHH----HHHHhhcCCchhhhcc
Confidence 3444555555 4554332 111 226676665544443222 12222355555443 3343 5554321 12
Q ss_pred CCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe-cCCccccCHHHH
Q 018437 117 TAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL-EEGYYVMNPVKA 195 (356)
Q Consensus 117 ~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~~L 195 (356)
....+-|-+||.|+..+-.-+...+ ....|++|.|++....+.-...|+.+..... +..+..+|.+.+
T Consensus 120 Ri~tvQ~lSGTGaLriga~Fl~~f~-----------~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ 188 (427)
T KOG1411|consen 120 RIVTVQTLSGTGALRVGAEFLARFY-----------PSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGM 188 (427)
T ss_pred ceeEEEeccCcchhhHHHHHHHhhc-----------cccceeecCCcccccCccccccCcceeeeeeccccccccchHHH
Confidence 2334455578888766654433321 1357999999998877777788998877776 444578898877
Q ss_pred HHHHhh---CceEEEEecCCCccccc---CCHHHHHHHHHHhhhccCCCCcEEEecccccccc
Q 018437 196 VELVDE---NTICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA 252 (356)
Q Consensus 196 ~~~i~~---~~~~v~~~~~~~~tG~~---~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~ 252 (356)
-+.+.+ ...++.--+.+||||+= +..++|.++.++. +.+-++|.||-||..
T Consensus 189 ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k------~~~pffDmAYQGfaS 245 (427)
T KOG1411|consen 189 LEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEK------NLLPFFDMAYQGFAS 245 (427)
T ss_pred HHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhc------cccchhhhhhccccc
Confidence 776664 33556667789999863 5678899999999 999999999988654
No 392
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=97.15 E-value=0.01 Score=54.29 Aligned_cols=128 Identities=13% Similarity=0.121 Sum_probs=90.9
Q ss_pred hCCCCCC--CCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCe-eEEEEe-
Q 018437 108 FNTPVAD--DKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE-LKEVKL- 183 (356)
Q Consensus 108 ~g~~~~~--~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~-v~~v~~- 183 (356)
+|.+... .+...++-+-+||.|+..+.--+...+ .+..|++|.|++.......+-.|.. +...+.
T Consensus 88 lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~-----------~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yW 156 (410)
T KOG1412|consen 88 LGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFY-----------NKNTVYVSNPTWENHHAIFEKAGFTTVATYPYW 156 (410)
T ss_pred cCCCchhhhhccccceeeccccchhhhhHHHHHHhc-----------ccceeEecCCchhHHHHHHHHcCCceeeeeeee
Confidence 5665421 234557888899999887755443321 1357999999999988888888844 555565
Q ss_pred cCCccccCHHHHHHHHhhCc---eEEEEecCCCccccc---CCHHHHHHHHHHhhhccCCCCcEEEecccccccc
Q 018437 184 EEGYYVMNPVKAVELVDENT---ICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA 252 (356)
Q Consensus 184 ~~~~~~~d~~~L~~~i~~~~---~~v~~~~~~~~tG~~---~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~ 252 (356)
|.++-.+|++.+...|+..| ..|.-.+..||||.= +-..+|+++.++. +.+-..|-||-|+..
T Consensus 157 d~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k------~lf~fFDiAYQGfAS 225 (410)
T KOG1412|consen 157 DAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSK------NLFPFFDIAYQGFAS 225 (410)
T ss_pred cCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhc------Cceeeeehhhccccc
Confidence 33457899999998887654 334445568999963 3467899999988 899999999987654
No 393
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=97.04 E-value=0.0072 Score=50.41 Aligned_cols=63 Identities=10% Similarity=0.103 Sum_probs=51.0
Q ss_pred cccCcchHHHHHHHHHHHHHHhC--CCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCc
Q 018437 87 MDEYPVTTELQNRCVNMIAHLFN--TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ 164 (356)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g--~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h 164 (356)
|..+.+..++++++++++.+.+| ++.+ ...+++|+|++.++..+++++.++ ++.|+++.|.|
T Consensus 88 Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~---pd~Ivvt~Ga~~al~~l~~~l~dp-------------GD~VlVp~P~Y 151 (153)
T PLN02994 88 FQDYHGLANFRKAIANFMAEARGGRVKFD---ADMIVLSAGATAANEIIMFCIADP-------------GDAFLVPTPYY 151 (153)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCccc---hhheEEcCCHHHHHHHHHHHHcCC-------------CCEEEEeCCCC
Confidence 44566889999999999999988 3321 135899999999999999988764 67999999987
Q ss_pred c
Q 018437 165 V 165 (356)
Q Consensus 165 ~ 165 (356)
+
T Consensus 152 ~ 152 (153)
T PLN02994 152 A 152 (153)
T ss_pred C
Confidence 5
No 394
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=96.79 E-value=0.0087 Score=55.64 Aligned_cols=171 Identities=15% Similarity=0.161 Sum_probs=92.0
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCC-eEEecCCCcchHH
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKP-NIVTGANVQVCWE 168 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~-~vi~s~~~h~s~~ 168 (356)
+....+||+.+++ |-++.|--.. +...+++.+|+|+-++.++.++.... .....| .||.+.|.|++|.
T Consensus 42 ~f~s~eL~~~Ir~-LH~~VGNAvt--~gr~IV~GtGsTQL~~AalyALSp~~--------~~~~~p~~VVa~aPYY~~Y~ 110 (363)
T PF04864_consen 42 WFISPELERQIRR-LHRVVGNAVT--DGRYIVFGTGSTQLFNAALYALSPNA--------SPSSSPASVVAAAPYYSSYP 110 (363)
T ss_dssp TTS-HHHHHHHHH-HHHHH-SB----TTSEEEEECHHHHHHHHHHHHHCHHT---------TTSSSEEEEE-SS--CHHH
T ss_pred eeccHHHHHHHHH-HHHHhccccc--cCcEEEEcCCHHHHHHHHHHhcCCCC--------CCCCCCceeEecCCCccchH
Confidence 3345677766554 4555554432 23558999999999988888774420 011234 8999999999999
Q ss_pred HHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccc
Q 018437 169 KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (356)
Q Consensus 169 ~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~ 248 (356)
...+.+.-..-...=|...+. + .-...+.+=++|+||||-|.+- + .+++.- +..+|.|-||-
T Consensus 111 ~qt~~f~s~~y~w~Gda~~~~-~------~~~~~~~IElVTSPNNPDG~lr--~---~V~~g~------~~k~I~D~AYY 172 (363)
T PF04864_consen 111 EQTDFFDSRLYKWAGDASNFK-N------SDNPSPYIELVTSPNNPDGQLR--E---AVLNGS------SGKVIHDLAYY 172 (363)
T ss_dssp HHCCCT-BTTEEEEEECCCGT-T-------S-CCGEEEEEESS-TTT-----------SSTTT------EEEEEEE-TT-
T ss_pred HHHHhccccCccccccHHhhc-c------CCCCCCeEEEEeCCCCCccccc--c---hhcCCC------Ccceeeeeeee
Confidence 988877555333333333232 1 1112456667899999999873 1 123434 66789999986
Q ss_pred cccccccCCCCcccccCCCceEEEEcCCcC-CCCCcCeeEEEEeCCCCC
Q 018437 249 GFIAPFLYPDLEWDFRLPLVKSINVSGHKY-GLVYAGVGWVVWRTKDDL 296 (356)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~-l~~P~g~g~l~~~~~~~~ 296 (356)
. |.+.|-. -. ..=|.+-+...|. +.+....|+.++||++..
T Consensus 173 W---PhyTpI~---~~-aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va 214 (363)
T PF04864_consen 173 W---PHYTPIT---AP-ADHDIMLFTLSKLTGHAGSRFGWALVKDEEVA 214 (363)
T ss_dssp S---TTTS------S--B--SEEEEEHHHHCS-GGG-EEEEEES-HHHH
T ss_pred c---ccccccC---CC-CCCceEEEEEecccCccccccceeeecCHHHH
Confidence 5 3333211 11 1236777777784 778889999999986443
No 395
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=92.30 E-value=1.4 Score=40.39 Aligned_cols=151 Identities=13% Similarity=-0.005 Sum_probs=78.1
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhh------CC---e---eEEEEecC--
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYF------EV---E---LKEVKLEE-- 185 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~------G~---~---v~~v~~~~-- 185 (356)
..|+++|||||-+|++.+|+..+ .++.|.+-...|--+...++.- |. + |...|+.+
T Consensus 105 c~F~NSGSEANDLALRLAR~ftk----------hqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvy 174 (452)
T KOG1403|consen 105 CFFVNSGSEANDLALRLARNFTK----------HQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVY 174 (452)
T ss_pred EEEecCCchhhHHHHHHHHhhcc----------cCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCcccc
Confidence 68999999999999999988521 1233433333333232222211 11 1 22233321
Q ss_pred -Cccc-----------cCHHHHHHHHhh------CceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEE
Q 018437 186 -GYYV-----------MNPVKAVELVDE------NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHV 243 (356)
Q Consensus 186 -~~~~-----------~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~v 243 (356)
..++ .=.+.+++.+++ ...+.+.-+-.+--|.+.| ++++++..+.+ |-.+|.
T Consensus 175 rGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~a------GGv~Ia 248 (452)
T KOG1403|consen 175 RGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSA------GGVCIA 248 (452)
T ss_pred ccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcC------CCeEEe
Confidence 0011 112344444432 2233333344444466543 57788888888 999999
Q ss_pred ecccccccccccCCCCcccccC--CCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 244 DAASGGFIAPFLYPDLEWDFRL--PLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 244 D~a~~~~~~~~~~~~~~~~~~~--~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
|+++-||.. . ..+-|.|+. .-.|.++ ..|-++-....+.+..+
T Consensus 249 DEVQvGFGR--v-G~hyWafq~y~fiPDIVt--mgKpmGNGhPVa~Vatt 293 (452)
T KOG1403|consen 249 DEVQVGFGR--V-GSHYWAFQTYNFIPDIVT--MGKPMGNGHPVAAVATT 293 (452)
T ss_pred ehhhhcccc--c-chhhhhhhhhccccchhe--ecccCCCCCeeeEEecc
Confidence 999977544 2 222344431 1234444 34555555556666554
No 396
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=87.88 E-value=4.2 Score=38.34 Aligned_cols=80 Identities=14% Similarity=0.192 Sum_probs=48.6
Q ss_pred HHHHHHHHhh-----Cce-EEEEecCCCcc----cccCCHHHHHHHHHHhhhccCCCCcEEEeccccccccc-ccCCCCc
Q 018437 192 PVKAVELVDE-----NTI-CVAAILGSTLT----GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP-FLYPDLE 260 (356)
Q Consensus 192 ~~~L~~~i~~-----~~~-~v~~~~~~~~t----G~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~-~~~~~~~ 260 (356)
++++++.|.+ ++. ++++---...- ++.+-+..+.+++++| ++.++||++|.|+... -+..+..
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh------~v~fivDEVQTGgGaTGk~WaHeh 328 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKH------GVAFIVDEVQTGGGATGKFWAHEH 328 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhc------CeEEEeeeeecCCCccCceeeehh
Confidence 4567777753 233 34433333332 3446689999999999 9999999998654431 1122222
Q ss_pred ccccCCCceEEEEcCCcCC
Q 018437 261 WDFRLPLVKSINVSGHKYG 279 (356)
Q Consensus 261 ~~~~~~~~Ds~~~~~hK~l 279 (356)
+++. .-.|.+++| .|+.
T Consensus 329 w~l~-~PpD~vTFS-KK~q 345 (484)
T KOG1405|consen 329 WNLD-SPPDVVTFS-KKFQ 345 (484)
T ss_pred cCCC-CCccceehh-hhhh
Confidence 3443 357998876 4554
No 397
>PLN02672 methionine S-methyltransferase
Probab=70.16 E-value=1.1e+02 Score=33.97 Aligned_cols=147 Identities=10% Similarity=0.024 Sum_probs=88.2
Q ss_pred HHHHHhcccCCCcccCc-chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 018437 75 LVMASINKNYVDMDEYP-VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYD 153 (356)
Q Consensus 75 ~i~~~~~~~~~~~~~~~-~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~ 153 (356)
.+++.+..+...|.+.| +...+++.+...+..+.+.+-.+ ..+++-+.-..|+-.+++.+--+.-.
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 475 (1082)
T PLN02672 409 YLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTP---DNVVVFPSRAVAIENALRLFSPRLAI---------- 475 (1082)
T ss_pred HHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCc---cceEEeccHHHHHHHHHHhhChHHHh----------
Confidence 34566666666655544 78889999999999999998643 44677777667776666544221100
Q ss_pred CCeEEecCCCcchHHHHHHhhC--------CeeEEEEecCCccccCHHHHHHHHhh-CceEEEEecCCCcccccCCHHHH
Q 018437 154 KPNIVTGANVQVCWEKFARYFE--------VELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLL 224 (356)
Q Consensus 154 ~~~vi~s~~~h~s~~~~~~~~G--------~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~i~~I 224 (356)
-++- ++..-+..|.......| ..+..+... -+-| .+.+.|++ ++.+|+.......--+..-++.|
T Consensus 476 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (1082)
T PLN02672 476 VDEH-LTRWLPKKWLTSLAIENATSDSKSDDVITVIEAP---RQSD--LVIELIKKLKPQVVVTGMADFEMRTSTAFEHL 549 (1082)
T ss_pred hhhh-hhccCCHHHHhHhhhhcccccCccCCeEEEEeCC---Ccch--HHHHHHHhCCCeEEEEeccchhhhhHHHHHHH
Confidence 0000 23333445555555444 223333322 1223 45556654 67777766555544444567888
Q ss_pred HHHHHHhhhccCCCCcEEEecc
Q 018437 225 HDLLTKKNEETGWDTPIHVDAA 246 (356)
Q Consensus 225 ~~i~~~~~~~~~~~~~l~vD~a 246 (356)
.+.+++. |++++.|..
T Consensus 550 ~~~~~~~------~~~~~~~~~ 565 (1082)
T PLN02672 550 LNVTAEI------GARLFLDIS 565 (1082)
T ss_pred HHHHHhh------CcEEEEehh
Confidence 8999999 999999964
No 398
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=62.88 E-value=47 Score=31.87 Aligned_cols=82 Identities=20% Similarity=0.056 Sum_probs=48.2
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHH
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i 199 (356)
.+..++|..+.-+|..+... | -+-.|++|...-..-...++.+|++++.++...+ ..-..+..++..
T Consensus 114 vV~aSsGN~G~alA~~a~~~---------G---~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~~~~-~~~~~~~a~~l~ 180 (368)
T PLN02556 114 LIEPTSGNMGISLAFMAAMK---------G---YKMILTMPSYTSLERRVTMRAFGAELVLTDPTKG-MGGTVKKAYELL 180 (368)
T ss_pred EEEeCCchHHHHHHHHHHHc---------C---CCEEEEECCCCCHHHHHHHHHcCCEEEEECCCCC-ccHHHHHHHHHH
Confidence 55677888887777765432 1 1347888877666677888899999998874321 111223334444
Q ss_pred hhCceEEEEecCCCc
Q 018437 200 DENTICVAAILGSTL 214 (356)
Q Consensus 200 ~~~~~~v~~~~~~~~ 214 (356)
++++-.+++..-+|+
T Consensus 181 ~~~~~~~~~~q~~np 195 (368)
T PLN02556 181 ESTPDAFMLQQFSNP 195 (368)
T ss_pred HhcCCCCccCCCCCH
Confidence 444444444444454
No 399
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=62.66 E-value=1.3e+02 Score=28.09 Aligned_cols=120 Identities=12% Similarity=0.003 Sum_probs=68.5
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCC--cc--h
Q 018437 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANV--QV--C 166 (356)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~--h~--s 166 (356)
....++|.-+-+.+.+ |+ ...+|.||.++|..-..++..+.. |. +...++-... +. .
T Consensus 47 NK~RKLefll~eal~~--g~--------dTlvT~GgiQSNh~r~tAavA~~l------Gl---~~v~ile~~~~~y~~ng 107 (323)
T COG2515 47 NKIRKLEFLLGEALRK--GA--------DTLVTYGGIQSNHVRQTAAVAAKL------GL---KCVLILENIEANYLLNG 107 (323)
T ss_pred cHHHHHHHHHhhhhhc--CC--------cEEEEecccchhHHHHHHHHHHhc------CC---cEEEEEecccccccccc
Confidence 3566777654444433 33 368999999999876555543311 11 1233333332 11 1
Q ss_pred HHHHHHhhCCeeEEEEecCCcc--ccCHHHHHHHHhh--CceEEEEecCCCccccc---CCHHHHHHHHHH
Q 018437 167 WEKFARYFEVELKEVKLEEGYY--VMNPVKAVELVDE--NTICVAAILGSTLTGEF---EDVKLLHDLLTK 230 (356)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~--~~d~~~L~~~i~~--~~~~v~~~~~~~~tG~~---~~i~~I~~i~~~ 230 (356)
..-....+|+.++.++...+ . ....+.+.+.+++ +...|+.--+.|+.|.. .-..+|.+-+++
T Consensus 108 n~Ll~~l~G~~~~~~~~~~d-~~~~~~~~~~~e~~~~~g~kpyvIp~GG~~~~g~lGyv~~a~Ei~~Q~~~ 177 (323)
T COG2515 108 NLLLSKLMGAEVRAVDAGTD-IGINASAEELAEEVRKQGGKPYVIPEGGSSPLGALGYVRLALEIAEQAEQ 177 (323)
T ss_pred chhhhhhcCceEEEecCCCC-hhhchhhHHHHHHHHhcCCCCcEeccCCcCccccccHHHHHHHHHHHHhh
Confidence 23444577999999887543 4 3344566666654 34466666778886665 444566666664
No 400
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=61.00 E-value=26 Score=32.60 Aligned_cols=78 Identities=21% Similarity=0.049 Sum_probs=49.3
Q ss_pred CeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHH
Q 018437 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVEL 198 (356)
Q Consensus 119 ~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~ 198 (356)
.++=.++|+.++-+|+.++..- .+-.+++|+..-.-..+.++.+|++++.+|..+.+..=-.+.+++.
T Consensus 64 tIVE~TSGNTGI~LA~vaa~~G------------y~~iivmP~~~S~er~~~l~a~GAevi~t~~~~g~~~~a~~~a~el 131 (300)
T COG0031 64 TIVEATSGNTGIALAMVAAAKG------------YRLIIVMPETMSQERRKLLRALGAEVILTPGAPGNMKGAIERAKEL 131 (300)
T ss_pred EEEEcCCChHHHHHHHHHHHcC------------CcEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCCCchHHHHHHHHHH
Confidence 3566677788888887766431 1346778877766788888999999999997432111123444444
Q ss_pred HhhCce-EEEE
Q 018437 199 VDENTI-CVAA 208 (356)
Q Consensus 199 i~~~~~-~v~~ 208 (356)
..+.+. ++..
T Consensus 132 ~~~~p~~~~~~ 142 (300)
T COG0031 132 AAEIPGYAVWL 142 (300)
T ss_pred HHhCCCceEch
Confidence 444443 5554
No 401
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=60.79 E-value=55 Score=28.83 Aligned_cols=65 Identities=6% Similarity=-0.032 Sum_probs=42.6
Q ss_pred HHHHHHhhCCeeEEE-EecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEE
Q 018437 167 WEKFARYFEVELKEV-KLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (356)
Q Consensus 167 ~~~~~~~~G~~v~~v-~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~v 243 (356)
+.++++.+|..+..+ +...+ ..--.+.++.++.+++.+|++...... ....+.+-|++. |++++.
T Consensus 20 ~~~~a~~~g~~~~~~~~~~~d-~~~q~~~i~~~i~~~~d~Iiv~~~~~~-----~~~~~l~~~~~~------gIpvv~ 85 (257)
T PF13407_consen 20 AKAAAKELGYEVEIVFDAQND-PEEQIEQIEQAISQGVDGIIVSPVDPD-----SLAPFLEKAKAA------GIPVVT 85 (257)
T ss_dssp HHHHHHHHTCEEEEEEESTTT-HHHHHHHHHHHHHTTESEEEEESSSTT-----TTHHHHHHHHHT------TSEEEE
T ss_pred HHHHHHHcCCEEEEeCCCCCC-HHHHHHHHHHHHHhcCCEEEecCCCHH-----HHHHHHHHHhhc------CceEEE
Confidence 456667789998886 43322 333456777888888887775544443 345666678888 887765
No 402
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=58.86 E-value=83 Score=27.83 Aligned_cols=95 Identities=13% Similarity=0.000 Sum_probs=57.5
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCC-----c----chHHHHHHhhCCeeEEEEecCCcccc
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANV-----Q----VCWEKFARYFEVELKEVKLEEGYYVM 190 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~-----h----~s~~~~~~~~G~~v~~v~~~~~~~~~ 190 (356)
..+-|||..+++.+.++.+. |.....-..+.|+.. | ......++.+|++++....+.. ..-
T Consensus 4 ~aL~SGGKDS~~Al~~a~~~---------G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~-~e~ 73 (223)
T COG2102 4 IALYSGGKDSFYALYLALEE---------GHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGE-EER 73 (223)
T ss_pred EEEEecCcHHHHHHHHHHHc---------CCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCcc-chh
Confidence 56789999997766666543 221111122233322 2 2245566678999888887642 344
Q ss_pred CHHHHHHHHhh-CceEEEEecCCCcccccC---CHHHHHHHHHHh
Q 018437 191 NPVKAVELVDE-NTICVAAILGSTLTGEFE---DVKLLHDLLTKK 231 (356)
Q Consensus 191 d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~---~i~~I~~i~~~~ 231 (356)
..++|.+++.. +...|+ +|.+. -.+.+-.+|++.
T Consensus 74 eve~L~~~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~l 111 (223)
T COG2102 74 EVEELKEALRRLKVDGIV-------AGAIASEYQKERVERLCEEL 111 (223)
T ss_pred hHHHHHHHHHhCcccEEE-------EchhhhHHHHHHHHHHHHHh
Confidence 67888888875 322333 36663 357788999999
No 403
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=57.58 E-value=20 Score=30.94 Aligned_cols=37 Identities=14% Similarity=0.006 Sum_probs=31.1
Q ss_pred ceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEec
Q 018437 203 TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (356)
Q Consensus 203 ~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~ 245 (356)
..+|.++-|+|..|.++|+++-++++++. |+.++.=+
T Consensus 113 kvvILLTDG~n~~~~i~P~~aAa~lA~~~------gV~iytIg 149 (191)
T cd01455 113 AIVIVLSDANLERYGIQPKKLADALAREP------NVNAFVIF 149 (191)
T ss_pred cEEEEEeCCCcCCCCCChHHHHHHHHHhC------CCEEEEEE
Confidence 35788999999999999999878999999 88777643
No 404
>PRK14994 SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional
Probab=56.53 E-value=84 Score=29.05 Aligned_cols=80 Identities=8% Similarity=-0.072 Sum_probs=52.8
Q ss_pred CeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhc
Q 018437 155 PNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEE 234 (356)
Q Consensus 155 ~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~ 234 (356)
+.|++.+.-+. .+....+++....+.+.+.++.-..+.+.+.+.+...+++++-.-+| +..||...+.+.|++.
T Consensus 39 DvI~~edtr~t--~~ll~~~~i~~~~~~~~~~~~~~~~~~i~~~l~~G~~ValvSdaGdP-~I~dpg~~Lv~~~~~~--- 112 (287)
T PRK14994 39 DLIAAEDTRHT--GLLLQHFAINARLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTP-LINDPGYHLVRTCREA--- 112 (287)
T ss_pred CEEEEeCCcch--HHHHhhcCCCCEEEEccCCCHHHHHHHHHHHHHCCCeEEEEccCCCC-ceeCCHHHHHHHHHHC---
Confidence 56777666554 34666777776666665433444455666666665556666645566 7789999999999988
Q ss_pred cCCCCcEEE
Q 018437 235 TGWDTPIHV 243 (356)
Q Consensus 235 ~~~~~~l~v 243 (356)
|+.+.+
T Consensus 113 ---gi~v~v 118 (287)
T PRK14994 113 ---GIRVVP 118 (287)
T ss_pred ---CCCEEE
Confidence 765443
No 405
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=55.62 E-value=17 Score=30.61 Aligned_cols=50 Identities=20% Similarity=0.280 Sum_probs=38.8
Q ss_pred CHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccc
Q 018437 191 NPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (356)
Q Consensus 191 d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~ 249 (356)
|..+|+++++.+...+++- +|.+.+++++.+.+++..+ .+++|+|-..|.
T Consensus 12 ~~~~le~~les~~~~vflL-----~~~i~~ik~ivk~lK~~gK----~vfiHvDLv~Gl 61 (181)
T COG1954 12 DNKDLEKALESESQYVFLL-----TGHILNIKEIVKKLKNRGK----TVFIHVDLVEGL 61 (181)
T ss_pred hHHHHHHHhcCCCeEEEEE-----echhhhHHHHHHHHHhCCc----EEEEEeHHhccc
Confidence 4567888888777766654 3667799999999999844 589999987764
No 406
>PRK08329 threonine synthase; Validated
Probab=54.57 E-value=1.3e+02 Score=28.63 Aligned_cols=52 Identities=17% Similarity=0.020 Sum_probs=36.1
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (356)
++..++|..+..+|..+.+.- -+-.|++|...-..-...++.+|++++.++-
T Consensus 107 vv~aSsGN~g~alA~~aa~~G------------~~~~v~vp~~~~~~k~~~~~~~GA~v~~v~~ 158 (347)
T PRK08329 107 VVIDSSGNAALSLALYSLSEG------------IKVHVFVSYNASKEKISLLSRLGAELHFVEG 158 (347)
T ss_pred EEEECCCcHHHHHHHHHHHcC------------CcEEEEECCCChHHHHHHHHHcCCEEEEECC
Confidence 566667777777777665431 1347888876655566777788999988873
No 407
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=53.67 E-value=17 Score=29.08 Aligned_cols=43 Identities=19% Similarity=0.240 Sum_probs=26.2
Q ss_pred ccCHHHH----HHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEE
Q 018437 189 VMNPVKA----VELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (356)
Q Consensus 189 ~~d~~~L----~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~v 243 (356)
.++.+.- ++.+..++.+|+++.+.. +-+.+.++|+++ ++++..
T Consensus 64 ~l~~~~r~~~l~~l~~~~~P~iIvt~~~~------~p~~l~e~a~~~------~ipll~ 110 (127)
T PF02603_consen 64 SLDEEERKERLEKLFSYNPPCIIVTRGLE------PPPELIELAEKY------NIPLLR 110 (127)
T ss_dssp CS-HHHHCCHHHHHCTTT-S-EEEETTT---------HHHHHHHHHC------T--EEE
T ss_pred HCCHHHHHHHHHHHhCCCCCEEEEECcCC------CCHHHHHHHHHh------CCcEEE
Confidence 4555544 444455888999888874 589999999999 988765
No 408
>PRK05638 threonine synthase; Validated
Probab=52.55 E-value=77 Score=31.20 Aligned_cols=51 Identities=12% Similarity=0.020 Sum_probs=36.1
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEE
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVK 182 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~ 182 (356)
++..++|..+..+|..+++. | -+-.|++|...-......++.+|++++.++
T Consensus 115 vv~aSsGN~g~alA~~aa~~---------G---~~~~i~vp~~~~~~k~~~~~~~GA~vi~v~ 165 (442)
T PRK05638 115 FIVASDGNAAASVAAYSARA---------G---KEAFVVVPRKVDKGKLIQMIAFGAKIIRYG 165 (442)
T ss_pred EEEeCCChHHHHHHHHHHHc---------C---CCEEEEEeCCCCHHHHHHHHhcCcEEEEEC
Confidence 56667777777777766543 1 134788888766666777888899998886
No 409
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=52.44 E-value=11 Score=38.75 Aligned_cols=40 Identities=20% Similarity=0.148 Sum_probs=35.6
Q ss_pred EEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccccc
Q 018437 206 VAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFI 251 (356)
Q Consensus 206 v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~ 251 (356)
+..=+|++..|+.++++++++-|++. ||-+++|-+++.+-
T Consensus 201 ~g~yAp~sryGtPedfk~fVD~aH~~------GIgViLD~V~~HF~ 240 (628)
T COG0296 201 TGYYAPTSRYGTPEDFKALVDAAHQA------GIGVILDWVPNHFP 240 (628)
T ss_pred ceeccccccCCCHHHHHHHHHHHHHc------CCEEEEEecCCcCC
Confidence 44558999999999999999999999 99999999988743
No 410
>PLN03013 cysteine synthase
Probab=49.95 E-value=56 Score=32.07 Aligned_cols=53 Identities=21% Similarity=0.137 Sum_probs=39.3
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (356)
++-.++|..+.-+|+.+... | -+-.|++|+.....-...++.+|++|+.++-+
T Consensus 178 VVeaSSGN~G~ALA~~a~~~---------G---~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 178 LVEPTSGNTGIGLAFIAASR---------G---YRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred EEEECCcHHHHHHHHHHHHc---------C---CCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 56677888888777766542 1 13478889888777888899999999988643
No 411
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=49.36 E-value=1.3e+02 Score=23.56 Aligned_cols=61 Identities=18% Similarity=0.082 Sum_probs=39.0
Q ss_pred hCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCC--CcccccCCHHHHHHHHHHhhhccCCCCcEEE
Q 018437 174 FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGS--TLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (356)
Q Consensus 174 ~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~--~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~v 243 (356)
.|+.+..|++....+. ..+.+.|.....-++++.++ ...+...|...|.+.|-++ ++++..
T Consensus 44 ~Gi~v~~vk~~~~~g~---~~i~~~i~~g~i~~VInt~~~~~~~~~~~dg~~iRr~a~~~------~Ip~~T 106 (115)
T cd01422 44 TGLTVNRMKSGPLGGD---QQIGALIAEGEIDAVIFFRDPLTAQPHEPDVKALLRLCDVY------NIPLAT 106 (115)
T ss_pred hCCcEEEEecCCCCch---hHHHHHHHcCceeEEEEcCCCCCCCcccccHHHHHHHHHHc------CCCEEE
Confidence 4888777755322243 44566666655555555555 3333366789999999999 888765
No 412
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=48.52 E-value=77 Score=31.73 Aligned_cols=70 Identities=9% Similarity=-0.146 Sum_probs=46.9
Q ss_pred HHhhC-CeeEEEEecCCccccCHHHHHHHHhh-CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccc
Q 018437 171 ARYFE-VELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (356)
Q Consensus 171 ~~~~G-~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~ 248 (356)
++..| .+|..++... ..++.+++.+.+.+ ++.+|.++.- |.......++++.+|+... ++.+++-|.+.
T Consensus 32 L~~~G~~~V~iiD~~~--~~~~~~~~~~~l~~~~pdvVgis~~---t~~~~~a~~~~~~~k~~~P----~~~iV~GG~h~ 102 (497)
T TIGR02026 32 LLDAGYHDVTFLDAMT--GPLTDEKLVERLRAHCPDLVLITAI---TPAIYIACETLKFARERLP----NAIIVLGGIHP 102 (497)
T ss_pred HHhcCCcceEEecccc--cCCCHHHHHHHHHhcCcCEEEEecC---cccHHHHHHHHHHHHHHCC----CCEEEEcCCCc
Confidence 44457 5788887653 46778888888765 6777777543 3344556677787877632 78888887764
Q ss_pred c
Q 018437 249 G 249 (356)
Q Consensus 249 ~ 249 (356)
.
T Consensus 103 t 103 (497)
T TIGR02026 103 T 103 (497)
T ss_pred C
Confidence 3
No 413
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=47.83 E-value=79 Score=24.33 Aligned_cols=71 Identities=20% Similarity=0.246 Sum_probs=44.3
Q ss_pred HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHh-hCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEec
Q 018437 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD-ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (356)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~-~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~ 245 (356)
+...++..|.++..++.+. +.+++.+.+. .++.+|.++...++ ......++.+.+|+... ++.+++-|
T Consensus 20 la~~l~~~G~~v~~~d~~~-----~~~~l~~~~~~~~pd~V~iS~~~~~--~~~~~~~l~~~~k~~~p----~~~iv~GG 88 (121)
T PF02310_consen 20 LAAYLRKAGHEVDILDANV-----PPEELVEALRAERPDVVGISVSMTP--NLPEAKRLARAIKERNP----NIPIVVGG 88 (121)
T ss_dssp HHHHHHHTTBEEEEEESSB------HHHHHHHHHHTTCSEEEEEESSST--HHHHHHHHHHHHHTTCT----TSEEEEEE
T ss_pred HHHHHHHCCCeEEEECCCC-----CHHHHHHHHhcCCCcEEEEEccCcC--cHHHHHHHHHHHHhcCC----CCEEEEEC
Confidence 4455556688888886543 3477777665 46777777664333 33445666666655522 78888877
Q ss_pred ccc
Q 018437 246 ASG 248 (356)
Q Consensus 246 a~~ 248 (356)
.+.
T Consensus 89 ~~~ 91 (121)
T PF02310_consen 89 PHA 91 (121)
T ss_dssp SSS
T ss_pred Cch
Confidence 664
No 414
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=47.10 E-value=71 Score=28.91 Aligned_cols=95 Identities=18% Similarity=0.157 Sum_probs=54.4
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-ec--CCCcch-----HHHHHHhhCCeeEEEEecCCccccC
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIV-TG--ANVQVC-----WEKFARYFEVELKEVKLEEGYYVMN 191 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi-~s--~~~h~s-----~~~~~~~~G~~v~~v~~~~~~~~~d 191 (356)
.+.-|||..+..++..+.-.- +++|+ ++ .|.-+. ....++..|++..+++++. |+
T Consensus 21 ~vAfSGGvDSslLa~la~~~l-------------G~~v~AvTv~sP~~p~~e~e~A~~~A~~iGi~H~~i~~~~----~~ 83 (269)
T COG1606 21 VVAFSGGVDSSLLAKLAKEAL-------------GDNVVAVTVDSPYIPRREIEEAKNIAKEIGIRHEFIKMNR----MD 83 (269)
T ss_pred EEEecCCccHHHHHHHHHHHh-------------ccceEEEEEecCCCChhhhhHHHHHHHHhCCcceeeehhh----cc
Confidence 577789999988877664331 22222 21 122222 3455667799999998863 34
Q ss_pred HHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccc
Q 018437 192 PVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (356)
Q Consensus 192 ~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~ 248 (356)
++-.+... + ++-+ -.-.=.+.|.+.++++ |.-+++||+-.
T Consensus 84 ~~~~~n~~--~-rCY~--------CK~~v~~~l~~~a~~~------Gyd~V~dGtNa 123 (269)
T COG1606 84 PEFKENPE--N-RCYL--------CKRAVYSTLVEEAEKR------GYDVVADGTNA 123 (269)
T ss_pred hhhccCCC--C-cchH--------HHHHHHHHHHHHHHHc------CCCEEEeCCcH
Confidence 22211111 1 1110 1112257788999999 99999999854
No 415
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=47.07 E-value=1.6e+02 Score=27.38 Aligned_cols=81 Identities=15% Similarity=0.155 Sum_probs=53.9
Q ss_pred CCeEEecCCCcchHHHHHHhhC--CeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCccccc--CCH-----HHH
Q 018437 154 KPNIVTGANVQVCWEKFARYFE--VELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEF--EDV-----KLL 224 (356)
Q Consensus 154 ~~~vi~s~~~h~s~~~~~~~~G--~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~--~~i-----~~I 224 (356)
+..||+|--.-.....-.+.+| ..|.+.+.| ..|.+.++++++.--..|.+..-..+|+.+ .|+ ++|
T Consensus 85 GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd----~~DedSIr~vvk~sNVVINLIGrd~eTknf~f~Dvn~~~aerl 160 (391)
T KOG2865|consen 85 GSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFD----LRDEDSIRAVVKHSNVVINLIGRDYETKNFSFEDVNVHIAERL 160 (391)
T ss_pred CCeEEEeccCCccchhheeecccccceeeeccC----CCCHHHHHHHHHhCcEEEEeeccccccCCcccccccchHHHHH
Confidence 4578887544433333334444 246666655 458999999998755566677777788876 333 789
Q ss_pred HHHHHHhhhccCCCC--cEEEe
Q 018437 225 HDLLTKKNEETGWDT--PIHVD 244 (356)
Q Consensus 225 ~~i~~~~~~~~~~~~--~l~vD 244 (356)
+.+|++. |+ ++|+-
T Consensus 161 Aricke~------GVerfIhvS 176 (391)
T KOG2865|consen 161 ARICKEA------GVERFIHVS 176 (391)
T ss_pred HHHHHhh------Chhheeehh
Confidence 9999998 76 67764
No 416
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=46.30 E-value=57 Score=31.62 Aligned_cols=78 Identities=19% Similarity=0.284 Sum_probs=47.7
Q ss_pred EecCCCcchHHHHHHhh--CCeeEEEEecCCccccCHHHHHHHHhh---CceEEEEecCCCcccccCCHHHHHHHHHHhh
Q 018437 158 VTGANVQVCWEKFARYF--EVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFEDVKLLHDLLTKKN 232 (356)
Q Consensus 158 i~s~~~h~s~~~~~~~~--G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~ 232 (356)
++..+.|+...+. +.+ .-++..++..+.....+.+.|.+.+.. +..+++ ......|...+++.+.++||+.
T Consensus 95 l~~~~~r~T~~K~-Rv~s~nQQllRvD~Ee~~~~~~~~~ll~~~~~~l~~~~~vV--LSDY~KG~L~~~q~~I~~ar~~- 170 (467)
T COG2870 95 LLRDKNRPTIVKL-RVLSRNQQLLRLDFEEKFPIEDENKLLEKIKNALKSFDALV--LSDYAKGVLTNVQKMIDLAREA- 170 (467)
T ss_pred eEeecCCCceeee-eeecccceEEEecccccCcchhHHHHHHHHHHHhhcCCEEE--EeccccccchhHHHHHHHHHHc-
Confidence 4445566554332 222 223455555432122445556555553 234444 3467789999999999999999
Q ss_pred hccCCCCcEEEe
Q 018437 233 EETGWDTPIHVD 244 (356)
Q Consensus 233 ~~~~~~~~l~vD 244 (356)
++++.+|
T Consensus 171 -----~~pVLvD 177 (467)
T COG2870 171 -----GIPVLVD 177 (467)
T ss_pred -----CCcEEEC
Confidence 9999999
No 417
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=43.71 E-value=84 Score=27.90 Aligned_cols=91 Identities=10% Similarity=0.004 Sum_probs=52.8
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE---ecCC-----Cc----chHHHHHHhhCCeeEEEEecCCc
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIV---TGAN-----VQ----VCWEKFARYFEVELKEVKLEEGY 187 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi---~s~~-----~h----~s~~~~~~~~G~~v~~v~~~~~~ 187 (356)
.+.-|||..+++...++..+ + ....+ ++.. .| ......++.+|++++.++.+..
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~------------~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~~- 69 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-H------------EVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEGT- 69 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-C------------eeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCCC-
Confidence 46779999998888777654 3 12222 2221 22 2356777788999887776432
Q ss_pred cccCHHHHHHHHhh-CceEEEEecCCCcccccCC---HHHHHHHHHHh
Q 018437 188 YVMNPVKAVELVDE-NTICVAAILGSTLTGEFED---VKLLHDLLTKK 231 (356)
Q Consensus 188 ~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~---i~~I~~i~~~~ 231 (356)
..--.++|++++.+ +...|+ +|.++- ...+..+|++.
T Consensus 70 ~e~~~e~l~~~l~~~gv~~vv-------~GdI~s~~qr~~~e~v~~~l 110 (223)
T TIGR00290 70 EEDEVEELKGILHTLDVEAVV-------FGAIYSEYQKTRIERVCREL 110 (223)
T ss_pred ccHHHHHHHHHHHHcCCCEEE-------ECCcccHHHHHHHHHHHHhc
Confidence 22234667776654 222222 366632 34566777777
No 418
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=42.65 E-value=2.1e+02 Score=26.18 Aligned_cols=53 Identities=19% Similarity=0.077 Sum_probs=36.4
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (356)
.+..++|..+...|..+.+. | -+-.|++|...-......++.+|++++.++-+
T Consensus 56 vv~~SsGN~g~alA~~a~~~---------G---~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~ 108 (291)
T cd01561 56 IIEPTSGNTGIGLAMVAAAK---------G---YRFIIVMPETMSEEKRKLLRALGAEVILTPEA 108 (291)
T ss_pred EEEeCCChHHHHHHHHHHHc---------C---CeEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 45566777776666654432 1 12378888877677778888899999888743
No 419
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=42.61 E-value=2.3e+02 Score=24.62 Aligned_cols=74 Identities=14% Similarity=0.076 Sum_probs=42.0
Q ss_pred eEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhcc
Q 018437 156 NIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEET 235 (356)
Q Consensus 156 ~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~ 235 (356)
++++-++ .......++..|++++ ..|-+ |.+.|.++++.- -.|+++.+.......+--..|.+.|++.
T Consensus 26 ~~l~R~~-~~~~~~~l~~~g~~vv--~~d~~----~~~~l~~al~g~-d~v~~~~~~~~~~~~~~~~~li~Aa~~a---- 93 (233)
T PF05368_consen 26 RALVRDP-SSDRAQQLQALGAEVV--EADYD----DPESLVAALKGV-DAVFSVTPPSHPSELEQQKNLIDAAKAA---- 93 (233)
T ss_dssp EEEESSS-HHHHHHHHHHTTTEEE--ES-TT-----HHHHHHHHTTC-SEEEEESSCSCCCHHHHHHHHHHHHHHH----
T ss_pred EEEEecc-chhhhhhhhcccceEe--ecccC----CHHHHHHHHcCC-ceEEeecCcchhhhhhhhhhHHHhhhcc----
Confidence 4455444 2223333445677765 44322 789999999853 3455555544334444557788999998
Q ss_pred CCCCcEEE
Q 018437 236 GWDTPIHV 243 (356)
Q Consensus 236 ~~~~~l~v 243 (356)
|+-.++
T Consensus 94 --gVk~~v 99 (233)
T PF05368_consen 94 --GVKHFV 99 (233)
T ss_dssp --T-SEEE
T ss_pred --ccceEE
Confidence 875555
No 420
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=41.89 E-value=69 Score=29.93 Aligned_cols=53 Identities=11% Similarity=0.191 Sum_probs=38.7
Q ss_pred cccCHHHHHHHHhh-----CceEEEEecCCCccccc-CCHHHHHHHHHHhhhccCCCCcEEEecc
Q 018437 188 YVMNPVKAVELVDE-----NTICVAAILGSTLTGEF-EDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (356)
Q Consensus 188 ~~~d~~~L~~~i~~-----~~~~v~~~~~~~~tG~~-~~i~~I~~i~~~~~~~~~~~~~l~vD~a 246 (356)
..++.+++++.++. ...-+++.+|+-|.|.- +...+|.++|++. ++.+++|..
T Consensus 109 p~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~------g~~vilD~S 167 (310)
T COG1105 109 PEISEAELEQFLEQLKALLESDDIVVLSGSLPPGVPPDAYAELIRILRQQ------GAKVILDTS 167 (310)
T ss_pred CCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCCCHHHHHHHHHHHHhc------CCeEEEECC
Confidence 45666666655442 12234667899999987 5579999999999 999999965
No 421
>PRK11761 cysM cysteine synthase B; Provisional
Probab=41.57 E-value=2.2e+02 Score=26.31 Aligned_cols=52 Identities=19% Similarity=0.167 Sum_probs=38.0
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (356)
.+..++|..+..+|..+... | -+-.|++|+..-......++.+|++++.++-
T Consensus 66 vv~aSsGN~g~alA~~a~~~---------G---~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 66 LIEATSGNTGIALAMIAAIK---------G---YRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred EEEeCCChHHHHHHHHHHHc---------C---CCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 56677888887777765432 1 1247888887666778888899999999885
No 422
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=40.54 E-value=2.7e+02 Score=25.83 Aligned_cols=52 Identities=15% Similarity=-0.016 Sum_probs=33.7
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (356)
++.+++|..+..+|..+... | -+-.|++|...-......++.+|++|+.++-
T Consensus 73 vv~~SsGN~g~alA~~a~~~---------G---~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~~ 124 (324)
T cd01563 73 VACASTGNTSASLAAYAARA---------G---IKCVVFLPAGKALGKLAQALAYGATVLAVEG 124 (324)
T ss_pred EEEeCCCHHHHHHHHHHHHc---------C---CceEEEEeCCCCHHHHHHHHHcCCEEEEECC
Confidence 55666777777666543322 1 1247788877645566677888999988763
No 423
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=40.29 E-value=3.3e+02 Score=25.78 Aligned_cols=101 Identities=12% Similarity=0.035 Sum_probs=55.2
Q ss_pred CeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcc------hHHHHHHhhCCeeEEEEecCCccccCH
Q 018437 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV------CWEKFARYFEVELKEVKLEEGYYVMNP 192 (356)
Q Consensus 119 ~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~------s~~~~~~~~G~~v~~v~~~~~~~~~d~ 192 (356)
+++..|||..+..++..+.... | ..+.++.-++.+. ...+.++.+|+....+.++.
T Consensus 62 ~iV~lSGGkDSs~la~ll~~~~--------g---l~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~d~------- 123 (343)
T TIGR03573 62 CIIGVSGGKDSTYQAHVLKKKL--------G---LNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITINP------- 123 (343)
T ss_pred EEEECCCCHHHHHHHHHHHHHh--------C---CceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeCCH-------
Confidence 4788899999987764433221 1 1233333333332 25566667888888777653
Q ss_pred HHHHHHHhhCceEEEEecCCCccccc--CCHHHHHHHHHHhhhccCCCCcEEEecccc
Q 018437 193 VKAVELVDENTICVAAILGSTLTGEF--EDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (356)
Q Consensus 193 ~~L~~~i~~~~~~v~~~~~~~~tG~~--~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~ 248 (356)
+.+++....... ...+|.... .....+.++|+++ |+.+++.|..+
T Consensus 124 ~~~~~l~~~~~~-----~~~~pc~~c~~~~~~~l~~~A~~~------gi~~Il~G~~~ 170 (343)
T TIGR03573 124 ETFRKLQRAYFK-----KVGDPEWPQDHAIFASVYQVALKF------NIPLIIWGENI 170 (343)
T ss_pred HHHHHHHHHHHh-----ccCCCchhhhhHHHHHHHHHHHHh------CCCEEEeCCCH
Confidence 222222211100 111221211 2356788999999 99999987643
No 424
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=39.71 E-value=1e+02 Score=27.32 Aligned_cols=103 Identities=9% Similarity=-0.014 Sum_probs=52.2
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHH
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i 199 (356)
.+..|||..+.+.+.++... +.......-.+...+......+.+......++.+|++++.+.+... ..--.++|.+.+
T Consensus 4 ~vl~SGGKDS~lAl~~~~~~-~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~~~~~~-~e~~~~~l~~~l 81 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALEE-HEVISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKLYTSGE-EEKEVEDLAGQL 81 (222)
T ss_pred EEEecCcHHHHHHHHHHHHc-CeeEEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEEEcCCc-hhHHHHHHHHHH
Confidence 56789999998888776654 2100000000000001111111223466778889999887776532 222345555555
Q ss_pred hh-CceEEEEecCCCcccccCC---HHHHHHHHHHh
Q 018437 200 DE-NTICVAAILGSTLTGEFED---VKLLHDLLTKK 231 (356)
Q Consensus 200 ~~-~~~~v~~~~~~~~tG~~~~---i~~I~~i~~~~ 231 (356)
.+ +...|+ +|.++- -..+..+|++.
T Consensus 82 ~~~gv~~vv-------~GdI~s~~qr~~~e~vc~~~ 110 (222)
T TIGR00289 82 GELDVEALC-------IGAIESNYQKSRIDKVCREL 110 (222)
T ss_pred HHcCCCEEE-------ECccccHHHHHHHHHHHHHc
Confidence 44 322222 366632 35577788887
No 425
>PLN00011 cysteine synthase
Probab=39.44 E-value=2.8e+02 Score=25.96 Aligned_cols=52 Identities=17% Similarity=0.142 Sum_probs=37.3
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (356)
.+..++|..+..+|..+... | -+-.|++|...-......++.+|++++.++-
T Consensus 72 vv~aSsGN~g~alA~~a~~~---------G---~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 123 (323)
T PLN00011 72 LIEATAGNTGIGLACIGAAR---------G---YKVILVMPSTMSLERRIILRALGAEVHLTDQ 123 (323)
T ss_pred EEEeCCChHHHHHHHHHHHc---------C---CeEEEEeCCCCCHHHHHHHHHcCCEEEEECC
Confidence 55677788887777665532 1 1247888887766788888899999988774
No 426
>KOG0369 consensus Pyruvate carboxylase [Energy production and conversion]
Probab=39.31 E-value=53 Score=33.94 Aligned_cols=35 Identities=23% Similarity=0.260 Sum_probs=29.4
Q ss_pred CCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccc
Q 018437 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA 252 (356)
Q Consensus 211 ~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~ 252 (356)
|-|| |-+...++-.++|++| |.++|.-+||||+..
T Consensus 164 PGTp-gPitt~~EA~eF~k~y------G~PvI~KAAyGGGGR 198 (1176)
T KOG0369|consen 164 PGTP-GPITTVEEALEFVKEY------GLPVIIKAAYGGGGR 198 (1176)
T ss_pred CCCC-CCcccHHHHHHHHHhc------CCcEEEeecccCCCc
Confidence 5555 6667788889999999 999999999998765
No 427
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=38.88 E-value=3.3e+02 Score=25.38 Aligned_cols=51 Identities=18% Similarity=-0.033 Sum_probs=33.9
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEE
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVK 182 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~ 182 (356)
++..++|..+..+|..+... | -+-.|++|...-..-...++.+|++++.++
T Consensus 54 vv~aSsGN~g~alA~~a~~~---------G---~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~ 104 (316)
T cd06448 54 VVCSSGGNAGLAAAYAARKL---------G---VPCTIVVPESTKPRVVEKLRDEGATVVVHG 104 (316)
T ss_pred EEEeCCcHHHHHHHHHHHHc---------C---CCEEEEECCCCCHHHHHHHHHcCCEEEEEC
Confidence 45555667776666554432 1 124788887765666778888999998876
No 428
>PLN02565 cysteine synthase
Probab=37.21 E-value=1.2e+02 Score=28.45 Aligned_cols=52 Identities=21% Similarity=0.094 Sum_probs=37.6
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (356)
.+-.|+|+.+.-+|+.+... | -+-.|++|...-..-...++.+|++++.++-
T Consensus 70 vv~aSsGN~g~alA~~a~~~---------G---~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 121 (322)
T PLN02565 70 LIEPTSGNTGIGLAFMAAAK---------G---YKLIITMPASMSLERRIILLAFGAELVLTDP 121 (322)
T ss_pred EEEECCChHHHHHHHHHHHc---------C---CeEEEEeCCCCcHHHHHHHHHcCCEEEEeCC
Confidence 45667888887777665432 1 1237888888777788888999999988764
No 429
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=37.07 E-value=2.3e+02 Score=25.99 Aligned_cols=53 Identities=21% Similarity=0.186 Sum_probs=38.6
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (356)
.+.+++|..+..+|..+.+. | -+-.|++|...-..-...++.+|++++.++-+
T Consensus 62 vv~aSsGN~g~alA~~a~~~---------G---~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~ 114 (290)
T TIGR01138 62 LIEATSGNTGIALAMIAALK---------G---YRMKLLMPDNMSQERKAAMRAYGAELILVTKE 114 (290)
T ss_pred EEEECCChHHHHHHHHHHHc---------C---CeEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 56677888887777665432 1 12478888877777888889999999988753
No 430
>PLN02970 serine racemase
Probab=36.74 E-value=2.6e+02 Score=26.21 Aligned_cols=52 Identities=21% Similarity=0.063 Sum_probs=37.1
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (356)
.+..++|..+..+|+.+... | -+-.|++|...-..-...++.+|++|+.++-
T Consensus 78 vv~aSsGN~g~alA~~a~~~---------G---~~~~ivvp~~~~~~k~~~~~~~GA~Vi~~~~ 129 (328)
T PLN02970 78 VVTHSSGNHAAALALAAKLR---------G---IPAYIVVPKNAPACKVDAVIRYGGIITWCEP 129 (328)
T ss_pred EEEECCcHHHHHHHHHHHHc---------C---CCEEEEECCCCCHHHHHHHHhcCCEEEEeCC
Confidence 56667788887777665532 1 1347888887766666778889999998874
No 431
>cd00886 MogA_MoaB MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.
Probab=36.73 E-value=1.6e+02 Score=24.10 Aligned_cols=54 Identities=9% Similarity=-0.058 Sum_probs=34.4
Q ss_pred chHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh-----CceEEEEecCCCcccccCCHHH
Q 018437 165 VCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-----NTICVAAILGSTLTGEFEDVKL 223 (356)
Q Consensus 165 ~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-----~~~~v~~~~~~~~tG~~~~i~~ 223 (356)
+.+...++..|+++....+-++ |.+.+++++.+ +..+|+.+ |-+..|..|-..+
T Consensus 23 ~~l~~~l~~~G~~v~~~~~v~D----d~~~i~~~l~~~~~~~~~DlVitt-GG~s~g~~D~t~~ 81 (152)
T cd00886 23 PALVELLEEAGHEVVAYEIVPD----DKDEIREALIEWADEDGVDLILTT-GGTGLAPRDVTPE 81 (152)
T ss_pred HHHHHHHHHcCCeeeeEEEcCC----CHHHHHHHHHHHHhcCCCCEEEEC-CCcCCCCCcCcHH
Confidence 3566778888999888877544 55666665542 34555544 5555577776544
No 432
>TIGR01275 ACC_deam_rel pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family. This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).
Probab=35.56 E-value=1.2e+02 Score=28.22 Aligned_cols=55 Identities=16% Similarity=0.041 Sum_probs=31.2
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCc-chHHHHHHhhCCeeEEEEe
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ-VCWEKFARYFEVELKEVKL 183 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h-~s~~~~~~~~G~~v~~v~~ 183 (356)
.++++||+.+|...-.++.-... | -+..|+++.... ......++.+|++++.++-
T Consensus 58 ~vv~~g~ssGN~g~alA~~a~~~------G---~~~~ivvp~~~~~~~~~~~~~~~Ga~v~~v~~ 113 (311)
T TIGR01275 58 TVITVGAIQSNHARATALAAKKL------G---LDAVLVLREKEELNGNLLLDKLMGAETRVYSA 113 (311)
T ss_pred EEEEcCCchhHHHHHHHHHHHHh------C---CceEEEecCCccCCCCHHHHHHcCCEEEEECc
Confidence 57787766666553332221110 1 124788887432 2344556889999988874
No 433
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=34.88 E-value=2.3e+02 Score=26.96 Aligned_cols=22 Identities=18% Similarity=0.009 Sum_probs=16.3
Q ss_pred CCHHHHHHHHHHhhhccCCCCcEEEecc
Q 018437 219 EDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (356)
Q Consensus 219 ~~i~~I~~i~~~~~~~~~~~~~l~vD~a 246 (356)
.-+.+.++.++++ +++++.||-
T Consensus 200 tAV~~~a~~a~~~------gvpiIADGG 221 (346)
T PRK05096 200 SAVIECADAAHGL------GGQIVSDGG 221 (346)
T ss_pred HHHHHHHHHHHHc------CCCEEecCC
Confidence 3455666777777 999999974
No 434
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=34.87 E-value=83 Score=24.54 Aligned_cols=48 Identities=17% Similarity=0.223 Sum_probs=37.6
Q ss_pred cccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEE
Q 018437 188 YVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (356)
Q Consensus 188 ~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~v 243 (356)
..+++++|++.+.+++-.|+ .|+--+|.+.=.++..+++++. ++-+++
T Consensus 47 Hkl~~eEle~~lee~~E~iv--vGTG~~G~l~l~~ea~e~~r~k------~~~vi~ 94 (121)
T COG1504 47 HKLALEELEELLEEGPEVIV--VGTGQSGMLELSEEAREFFRKK------GCEVIE 94 (121)
T ss_pred cccCHHHHHHHHhcCCcEEE--EecCceeEEEeCHHHHHHHHhc------CCeEEE
Confidence 68999999999998876554 3666778887778888889888 755544
No 435
>COG2052 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.85 E-value=83 Score=22.65 Aligned_cols=33 Identities=15% Similarity=0.217 Sum_probs=25.8
Q ss_pred eEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccc
Q 018437 204 ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (356)
Q Consensus 204 ~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~ 249 (356)
++|.+.+|.+. |++.|.+-++.. + ...|+.||-
T Consensus 18 RviaIVsPESa-----PiKRii~eArdr------~--~LIDATYGR 50 (89)
T COG2052 18 RVIAIVSPESA-----PIKRIIQEARDR------G--MLIDATYGR 50 (89)
T ss_pred eEEEEECCCcc-----cHHHHHHHHHhc------C--cEEEcccCc
Confidence 56666777666 999999999988 6 456999984
No 436
>cd06305 PBP1_methylthioribose_binding_like Methylthioribose-binding protein-like of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily. Methylthioribose-binding protein-like of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. The sugar-binding domain of the periplasmic proteins in this group is also homologous to the ligand-binding domain of eukaryotic receptors such as metabotropic glutamate receptor (mGluR), DNA-binding transcriptional repressors such as LacI and GalR.
Probab=33.85 E-value=1.9e+02 Score=25.39 Aligned_cols=12 Identities=17% Similarity=0.030 Sum_probs=5.2
Q ss_pred HHHhhCCeeEEE
Q 018437 170 FARYFEVELKEV 181 (356)
Q Consensus 170 ~~~~~G~~v~~v 181 (356)
+++..|..+..+
T Consensus 24 ~~~~~g~~~~~~ 35 (273)
T cd06305 24 EAEALGGDLRVY 35 (273)
T ss_pred HHHHcCCEEEEE
Confidence 333445544443
No 437
>PRK08246 threonine dehydratase; Provisional
Probab=33.82 E-value=1.9e+02 Score=26.90 Aligned_cols=52 Identities=13% Similarity=0.006 Sum_probs=37.1
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (356)
++..++|..+..+|..+.... -+-.|++|...-......++.+|++++.++-
T Consensus 71 vv~aSsGN~g~a~A~~a~~~G------------~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~ 122 (310)
T PRK08246 71 VVAASGGNAGLAVAYAAAALG------------VPATVFVPETAPPAKVARLRALGAEVVVVGA 122 (310)
T ss_pred EEEeCCCHHHHHHHHHHHHcC------------CCEEEEECCCCcHHHHHHHHHCCCEEEEeCC
Confidence 677778888877777655331 1347888877666667788889999988763
No 438
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]
Probab=33.79 E-value=1.4e+02 Score=28.10 Aligned_cols=82 Identities=16% Similarity=0.086 Sum_probs=60.6
Q ss_pred CCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhh
Q 018437 154 KPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKN 232 (356)
Q Consensus 154 ~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~ 232 (356)
+|..|+|+.+-.+.....++-..+...||.-. .+..|+-+.+++...+.- -.|+.+..-.+.++++.+.|++.
T Consensus 75 kPd~IVpEiEAI~td~L~elE~~G~~VVP~ArAt~ltMnRegiRrlAAeeL-----glpTs~Y~fa~s~~e~~~a~~~i- 148 (394)
T COG0027 75 KPDYIVPEIEAIATDALVELEEEGYTVVPNARATKLTMNREGIRRLAAEEL-----GLPTSKYRFADSLEELRAAVEKI- 148 (394)
T ss_pred CCCeeeehhhhhhHHHHHHHHhCCceEccchHHHHhhhcHHHHHHHHHHHh-----CCCCccccccccHHHHHHHHHHc-
Confidence 57788899888887777776655666788743 347899999988776541 23667777778888888888888
Q ss_pred hccCCCCcEEEecc
Q 018437 233 EETGWDTPIHVDAA 246 (356)
Q Consensus 233 ~~~~~~~~l~vD~a 246 (356)
|.+.+|--.
T Consensus 149 -----GfPcvvKPv 157 (394)
T COG0027 149 -----GFPCVVKPV 157 (394)
T ss_pred -----CCCeecccc
Confidence 888887643
No 439
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=33.67 E-value=1e+02 Score=24.01 Aligned_cols=44 Identities=7% Similarity=-0.144 Sum_probs=19.6
Q ss_pred cccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHh
Q 018437 188 YVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (356)
Q Consensus 188 ~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~ 231 (356)
+++++++|+++-+..-+.|+-+-|.......-..+++.+.|++.
T Consensus 13 ~Q~~~~d~~~la~~GfktVInlRpd~E~~~qp~~~~~~~~a~~~ 56 (110)
T PF04273_consen 13 GQPSPEDLAQLAAQGFKTVINLRPDGEEPGQPSSAEEAAAAEAL 56 (110)
T ss_dssp CS--HHHHHHHHHCT--EEEE-S-TTSTTT-T-HHCHHHHHHHC
T ss_pred CCCCHHHHHHHHHCCCcEEEECCCCCCCCCCCCHHHHHHHHHHc
Confidence 46666666655555555555555544432222344566666666
No 440
>PRK06450 threonine synthase; Validated
Probab=33.66 E-value=2.2e+02 Score=26.90 Aligned_cols=52 Identities=10% Similarity=-0.054 Sum_probs=36.8
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (356)
++..|+|..+.-.|..+.+.- -+-.|++|...-..-...++.+|++++.++-
T Consensus 100 vv~aSsGN~g~slA~~aa~~G------------~~~~i~vP~~~~~~k~~~i~~~GA~vi~v~~ 151 (338)
T PRK06450 100 ISEDSSGNAGASIAAYGAAAG------------IEVKIFVPETASGGKLKQIESYGAEVVRVRG 151 (338)
T ss_pred EEEECCcHHHHHHHHHHHHcC------------CCEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Confidence 566677777776666655421 1347888888776777788889999998863
No 441
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=33.56 E-value=1.2e+02 Score=28.45 Aligned_cols=83 Identities=14% Similarity=0.162 Sum_probs=51.1
Q ss_pred cCHHHHHHHHhh-----CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEec--ccccccccccCCCCccc
Q 018437 190 MNPVKAVELVDE-----NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA--ASGGFIAPFLYPDLEWD 262 (356)
Q Consensus 190 ~d~~~L~~~i~~-----~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~--a~~~~~~~~~~~~~~~~ 262 (356)
++.+.+++.++. +.+.|+ .--|+|-|.+-.-+.|++..+++.++. .+++.|+. |.||+++.
T Consensus 80 ~~~~~~~~~l~~~~~~~~vk~vv-L~inSPGG~v~as~~i~~~l~~l~~~~--PV~v~v~~~AASGGY~IA--------- 147 (317)
T COG0616 80 IGGDDIEEILRAARADPSVKAVV-LRINSPGGSVVASELIARALKRLRAKK--PVVVSVGGYAASGGYYIA--------- 147 (317)
T ss_pred ccHHHHHHHHHHHhcCCCCceEE-EEEECcCCchhHHHHHHHHHHHHhhcC--CEEEEECCeecchhhhhh---------
Confidence 345555554432 344443 345677788888888888888875432 47777763 55665541
Q ss_pred ccCCCceEEEEcCCcCCCCCcCeeEEEE
Q 018437 263 FRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (356)
Q Consensus 263 ~~~~~~Ds~~~~~hK~l~~P~g~g~l~~ 290 (356)
..+|-+..+++-.. +| +|++..
T Consensus 148 ---~aAd~I~a~p~si~-GS--IGVi~~ 169 (317)
T COG0616 148 ---LAADKIVADPSSIT-GS--IGVISG 169 (317)
T ss_pred ---ccCCEEEecCCcee-ee--ceeEEe
Confidence 35788888887765 33 456654
No 442
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=33.27 E-value=1.4e+02 Score=27.14 Aligned_cols=60 Identities=20% Similarity=0.341 Sum_probs=40.5
Q ss_pred EEEecCCccccCHHHHHHHHhh-----CceEEEEecCCCcccc---cCCHHHHHHHHHHhhhccCCCCcEEEecccc
Q 018437 180 EVKLEEGYYVMNPVKAVELVDE-----NTICVAAILGSTLTGE---FEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (356)
Q Consensus 180 ~v~~~~~~~~~d~~~L~~~i~~-----~~~~v~~~~~~~~tG~---~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~ 248 (356)
.|-+... ..++++++..+++. +..++.+--|.+. |. +-|+..|.- .|+. ++++++|..++
T Consensus 118 pV~lKrG-~~~t~~e~l~aaeyi~~~Gn~~viLcERG~tf-~y~r~~~D~~~ip~-~k~~------~~PVi~DpSHs 185 (258)
T TIGR01362 118 IVNVKKG-QFLSPWDMKNVVEKVLSTGNKNILLCERGTSF-GYNNLVVDMRSLPI-MREL------GCPVIFDATHS 185 (258)
T ss_pred eEEecCC-CcCCHHHHHHHHHHHHHcCCCcEEEEeCCCCc-CCCCcccchhhhHH-HHhc------CCCEEEeCCcc
Confidence 3444443 56788776655543 5667777777755 55 457888774 4667 89999999986
No 443
>PRK08197 threonine synthase; Validated
Probab=32.94 E-value=2.6e+02 Score=26.99 Aligned_cols=52 Identities=15% Similarity=-0.016 Sum_probs=35.5
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (356)
++..|+|..+..+|..+.+. | -+-.|++|...-......++.+|++|+.++-
T Consensus 130 vv~aSsGN~g~alA~~aa~~---------G---~~~~v~vp~~~~~~k~~~~~~~GA~Vi~v~~ 181 (394)
T PRK08197 130 LAMPTNGNAGAAWAAYAARA---------G---IRATIFMPADAPEITRLECALAGAELYLVDG 181 (394)
T ss_pred EEEeCCcHHHHHHHHHHHHc---------C---CcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Confidence 55566777777777665542 1 1347888876655666777888999998874
No 444
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff.
Probab=32.52 E-value=4.2e+02 Score=26.11 Aligned_cols=124 Identities=17% Similarity=0.091 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEec-CCCcc---hHHH
Q 018437 94 TELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTG-ANVQV---CWEK 169 (356)
Q Consensus 94 ~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s-~~~h~---s~~~ 169 (356)
.++++.+.+.+.+.+..+. ..++.-|||-.+-..+..+.... . + ....--.+-.+ ..... ....
T Consensus 236 e~l~~~l~~aV~~r~~~~~-----~vg~~LSGGlDSs~iaa~a~~~~-~-----~-~~~~~~t~~~~~~~~~~E~~~A~~ 303 (467)
T TIGR01536 236 DELRSLLEDAVKRRLVADV-----PVGVLLSGGLDSSLVAAIARREA-P-----R-GPVHTFSIGFEGSPDFDESPYARK 303 (467)
T ss_pred HHHHHHHHHHHHHHhccCC-----ceEEEecCChhHHHHHHHHHHhc-C-----C-CCceEEEEecCCCCCCChHHHHHH
Confidence 4455555556665554332 34888999998877765543321 0 0 00000022222 12222 4567
Q ss_pred HHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEec
Q 018437 170 FARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (356)
Q Consensus 170 ~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~ 245 (356)
.++.+|++...+.++++.. .+.+.+.+... -.|.... ...+.-.+.+.++++ |+-++.+|
T Consensus 304 vA~~lg~~~~~i~~~~~~~---~~~~~~~v~~~------~~p~~~~-~~~~~~~l~~~a~~~------G~~vlltG 363 (467)
T TIGR01536 304 VADHLGTEHHEVLFSVEEG---LDALPEVIYHL------EDPTTIR-ASIPLYLLSKLARED------GVKVVLSG 363 (467)
T ss_pred HHHHhCCcCeEEECCHHHH---HHHHHHHHHhh------CCCCCCc-hHHHHHHHHHHHHhc------CCEEEEec
Confidence 7788899988887764211 22333333210 0111111 112455678888888 88877765
No 445
>PF04309 G3P_antiterm: Glycerol-3-phosphate responsive antiterminator; InterPro: IPR006699 Glycerol enters bacterial cells via facilitated diffusion, an energy-independent transport process catalysed by the glycerol transport facilitator GlpF, an integral membrane protein of the aquaporin family. Intracellular glycerol is usually converted to glycerol-3-P in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK). Glycerol-3-P, the inducer of the glpFK operon, is not a substrate for GlpF and hence remains entrapped in the cell where it is metabolized further. In some bacterial species, for example Bacillus firmus, glycerol-3-P activates the antiterminator GlpP []. In B. subtilis, glpF and glpK are organised in an operon followed by the glycerol-3-P dehydrogenase-encoding glpD gene and preceded by glpP coding for an antiterminator regulating the expression of glpFK, glpD and glpTQ. Their induction requires the inducer glycerol-3-P, which activates the antiterminator GlpP by allowing it to bind to the leader region of glpD and presumably also of glpFK and glpTQ mRNAs.; GO: 0006355 regulation of transcription, DNA-dependent, 0009607 response to biotic stimulus; PDB: 1VKF_A 3KTS_G.
Probab=32.48 E-value=8.3 Score=32.80 Aligned_cols=48 Identities=15% Similarity=0.223 Sum_probs=34.3
Q ss_pred HHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccc
Q 018437 193 VKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (356)
Q Consensus 193 ~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~ 249 (356)
+.|+++++.+...|++.. |.+..++.+.+.++++.+ -+++|+|-..|.
T Consensus 10 ~~l~~al~s~~~~vfLl~-----g~I~~l~~~v~~~~~~gK----~vfVHiDli~Gl 57 (175)
T PF04309_consen 10 EDLEKALESDVEVVFLLT-----GDIGNLKDIVKRLKAAGK----KVFVHIDLIEGL 57 (175)
T ss_dssp CCCCCCCCSSSSEEEE-S-----EECCCHHHHHHHHHHTT-----EEEEECCGEETB
T ss_pred HHHHHHHcCCCCEEEEEc-----CcHHHHHHHHHHHHHcCC----EEEEEehhcCCC
Confidence 345666666666666554 667799999999999944 579999987663
No 446
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=32.46 E-value=1.7e+02 Score=27.66 Aligned_cols=118 Identities=12% Similarity=0.031 Sum_probs=62.7
Q ss_pred HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEE-ecC--CCcccccCCHHHHHHHHHHhhhccCCCCcEEE
Q 018437 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAA-ILG--STLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (356)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~-~~~--~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~v 243 (356)
....++.+|++++.-+...+.-.+-.++++.+..++...|++ |+| +|-..-.+.+++|.+++++.-...-+.+++..
T Consensus 186 L~~w~er~gv~vI~~~~G~DpAaVafDAi~~Akar~~DvvliDTAGRLhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvl 265 (340)
T COG0552 186 LEVWGERLGVPVISGKEGADPAAVAFDAIQAAKARGIDVVLIDTAGRLHNKKNLMDELKKIVRVIKKDDPDAPHEILLVL 265 (340)
T ss_pred HHHHHHHhCCeEEccCCCCCcHHHHHHHHHHHHHcCCCEEEEeCcccccCchhHHHHHHHHHHHhccccCCCCceEEEEE
Confidence 334455668877765422222334456777777776655543 333 34445557889999999877111001267777
Q ss_pred ecccccccccccCCCCccccc-CCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 244 DAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 244 D~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
|+..|--.+. ..-.|. .-++|.+.+. |.=+...|-.++.+.
T Consensus 266 DAttGqnal~-----QAk~F~eav~l~GiIlT--KlDgtAKGG~il~I~ 307 (340)
T COG0552 266 DATTGQNALS-----QAKIFNEAVGLDGIILT--KLDGTAKGGIILSIA 307 (340)
T ss_pred EcccChhHHH-----HHHHHHHhcCCceEEEE--ecccCCCcceeeeHH
Confidence 9987642221 011222 2356666643 554556654444443
No 447
>PRK06381 threonine synthase; Validated
Probab=32.28 E-value=2.1e+02 Score=26.64 Aligned_cols=52 Identities=15% Similarity=-0.084 Sum_probs=33.9
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (356)
.+..++|..+..+|+.+... | -+-.|++|...-....+.++.+|++|+.++-
T Consensus 66 lv~aSsGN~g~alA~~aa~~---------G---~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~ 117 (319)
T PRK06381 66 ITVGTCGNYGASIAYFARLY---------G---LKAVIFIPRSYSNSRVKEMEKYGAEIIYVDG 117 (319)
T ss_pred EEEeCCcHHHHHHHHHHHHc---------C---CcEEEEECCCCCHHHHHHHHHcCCEEEEcCC
Confidence 44455667776666655432 1 1247888876655666778889999988873
No 448
>PRK06110 hypothetical protein; Provisional
Probab=31.81 E-value=2.3e+02 Score=26.51 Aligned_cols=51 Identities=20% Similarity=0.065 Sum_probs=34.5
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEE
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVK 182 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~ 182 (356)
++..++|..+..+|+.+.+. | -+-.|++|...-..-....+.+|++|+.++
T Consensus 73 vv~aSsGN~g~alA~~a~~~---------G---~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~ 123 (322)
T PRK06110 73 VISATRGNHGQSVAFAARRH---------G---LAATIVVPHGNSVEKNAAMRALGAELIEHG 123 (322)
T ss_pred EEEECCCHHHHHHHHHHHHc---------C---CCEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Confidence 45566777777777665432 1 134788888765556677788999988764
No 449
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=31.70 E-value=3.9e+02 Score=24.49 Aligned_cols=52 Identities=21% Similarity=0.156 Sum_probs=37.8
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (356)
.+..++|..+..+|..+.+. |. +-.|++|+..-..-....+.+|++++.++-
T Consensus 60 vv~aSsGN~g~alA~~a~~~---------Gl---~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~ 111 (298)
T TIGR01139 60 IVEPTSGNTGIALAMVAAAR---------GY---KLILTMPETMSIERRKLLKAYGAELVLTPG 111 (298)
T ss_pred EEEeCCChhHHHHHHHHHHc---------CC---eEEEEeCCccCHHHHHHHHHcCCEEEEECC
Confidence 56667888887777665532 11 247888887767778888899999998874
No 450
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=31.59 E-value=2.9e+02 Score=22.54 Aligned_cols=62 Identities=19% Similarity=0.126 Sum_probs=39.5
Q ss_pred CCeeEEEEecC-CccccCHHHHHHHHhhCceEEEEecC--CCcccccCCHHHHHHHHHHhhhccCCCCcEEEecc
Q 018437 175 EVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILG--STLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (356)
Q Consensus 175 G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~--~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a 246 (356)
|+.+..| +.+ ..+. ..+.+.|..+..-++++.+ +...+...|...|.+.|-++ +++++..-+
T Consensus 50 Gi~v~~v-i~~~~gg~---~~i~~~I~~g~i~lVInt~dp~~~~~~~~D~~~IRR~Av~~------~IP~~T~l~ 114 (142)
T PRK05234 50 GLDVTRL-LSGPLGGD---QQIGALIAEGKIDMLIFFRDPLTAQPHDPDVKALLRLADVW------NIPVATNRA 114 (142)
T ss_pred CCeeEEE-EcCCCCCc---hhHHHHHHcCceeEEEEecCCCCCCcccchHHHHHHHHHHc------CCCEEcCHH
Confidence 7777766 322 1133 3456666655444555555 54444466788999999999 999988643
No 451
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=31.35 E-value=1e+02 Score=24.04 Aligned_cols=45 Identities=13% Similarity=0.009 Sum_probs=30.2
Q ss_pred CHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccc
Q 018437 191 NPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (356)
Q Consensus 191 d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~ 248 (356)
-++.++++....++.+++..+ ..-+++.++|+++ ++-++-..+.|
T Consensus 68 ~~~~v~~~~~~g~~~v~~~~g-------~~~~~~~~~a~~~------gi~vigp~C~g 112 (116)
T PF13380_consen 68 VPEIVDEAAALGVKAVWLQPG-------AESEELIEAAREA------GIRVIGPNCLG 112 (116)
T ss_dssp HHHHHHHHHHHT-SEEEE-TT-------S--HHHHHHHHHT------T-EEEESS-HH
T ss_pred HHHHHHHHHHcCCCEEEEEcc-------hHHHHHHHHHHHc------CCEEEeCCcce
Confidence 356667776667888887777 5668899999999 99888777765
No 452
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=31.27 E-value=1.6e+02 Score=26.07 Aligned_cols=52 Identities=23% Similarity=0.102 Sum_probs=33.2
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (356)
++..++|..+..+|..+... | -+-.|++|..........++.+|++++.++-
T Consensus 53 vv~~ssGN~g~alA~~a~~~---------g---~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~ 104 (244)
T cd00640 53 IIESTGGNTGIALAAAAARL---------G---LKCTIVMPEGASPEKVAQMRALGAEVVLVPG 104 (244)
T ss_pred EEEeCCcHHHHHHHHHHHHc---------C---CCEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 44455566665555544321 1 1347888877766677778888998887764
No 453
>PRK08638 threonine dehydratase; Validated
Probab=29.19 E-value=1.1e+02 Score=28.79 Aligned_cols=51 Identities=10% Similarity=-0.155 Sum_probs=37.2
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEE
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVK 182 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~ 182 (356)
++.+++|..+..+|+.+.... -+-.|++|+.....-...++.+|++|+.++
T Consensus 78 vv~~SsGN~g~alA~~aa~~G------------~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~ 128 (333)
T PRK08638 78 VVACSAGNHAQGVALSCALLG------------IDGKVVMPKGAPKSKVAATCGYGAEVVLHG 128 (333)
T ss_pred EEEeCCcHHHHHHHHHHHHcC------------CCEEEEeCCCCcHHHHHHHHHcCCEEEEEC
Confidence 566777888877777665431 124788888877777788889999998775
No 454
>cd06282 PBP1_GntR_like_2 Ligand-binding domain of putative DNA transcription repressors highly similar to that of the repressor specific for gluconate (GntR) which is a member of the LacI-GalR family of bacterial transcription regulators. This group includes the ligand-binding domain of putative DNA transcription repressors highly similar to that of the repressor specific for gluconate (GntR) which is a member of the LacI-GalR family of bacterial transcription regulators. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding
Probab=29.04 E-value=3.2e+02 Score=23.76 Aligned_cols=14 Identities=29% Similarity=-0.014 Sum_probs=5.3
Q ss_pred HHHHHhhCceEEEE
Q 018437 195 AVELVDENTICVAA 208 (356)
Q Consensus 195 L~~~i~~~~~~v~~ 208 (356)
++.+...+..+|++
T Consensus 72 ~~~~~~~~ipvV~~ 85 (266)
T cd06282 72 LDLLDAERVPYVLA 85 (266)
T ss_pred HHHHhhCCCCEEEE
Confidence 33333333344443
No 455
>smart00642 Aamy Alpha-amylase domain.
Probab=28.56 E-value=47 Score=27.87 Aligned_cols=30 Identities=23% Similarity=0.252 Sum_probs=25.9
Q ss_pred cccccCCHHHHHHHHHHhhhccCCCCcEEEeccccc
Q 018437 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (356)
Q Consensus 214 ~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~ 249 (356)
..|+.++++++++-||++ |+.+++|-+...
T Consensus 65 ~~Gt~~d~~~lv~~~h~~------Gi~vilD~V~NH 94 (166)
T smart00642 65 RFGTMEDFKELVDAAHAR------GIKVILDVVINH 94 (166)
T ss_pred ccCCHHHHHHHHHHHHHC------CCEEEEEECCCC
Confidence 458889999999999999 999999987543
No 456
>PRK03910 D-cysteine desulfhydrase; Validated
Probab=28.31 E-value=1.9e+02 Score=27.05 Aligned_cols=56 Identities=16% Similarity=0.014 Sum_probs=32.1
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcc--------hHHHHHHhhCCeeEEEEec
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV--------CWEKFARYFEVELKEVKLE 184 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~--------s~~~~~~~~G~~v~~v~~~ 184 (356)
.++|+|++.+|...-.++.-+.. | -+-.|+++...-. .....++.+|++++.++-+
T Consensus 66 ~vvt~g~s~gN~g~alA~~a~~~------G---~~~~i~vp~~~~~~~~~~~~~~~~~~~~~~Ga~vi~~~~~ 129 (331)
T PRK03910 66 TLITAGAIQSNHARQTAAAAAKL------G---LKCVLLLENPVPTEAENYLANGNVLLDDLFGAEIHVVPAG 129 (331)
T ss_pred EEEEcCcchhHHHHHHHHHHHHh------C---CcEEEEEcCCCCcccccccCCCcHHHHHHcCCEEEEeCcc
Confidence 46788876666543333221111 1 1246777765442 2336678899999888754
No 457
>TIGR00334 5S_RNA_mat_M5 ribonuclease M5. This family of orthologous proteins shows a weak but significant similarity to the central region of the DnaG-type DNA primase. The region of similarity is termed the Toprim (topoisomerase-primase) domain and is also shared by RecR, OLD family nucleases, and type IA and II topoisomerases.
Probab=28.14 E-value=1e+02 Score=26.19 Aligned_cols=52 Identities=21% Similarity=0.149 Sum_probs=36.7
Q ss_pred cccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccc
Q 018437 188 YVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGF 250 (356)
Q Consensus 188 ~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~ 250 (356)
|+-|...|+++++- -++.|.|+.. ..+-++.|.+..++. ++.+..|.=+.|-
T Consensus 10 GK~D~~~lk~~~d~---~~I~T~Gs~i--~~~~i~~i~~~~~~r------gVIIfTDpD~~Ge 61 (174)
T TIGR00334 10 GKDDQARIKQAFDV---DVIETNGSAL--KDETINLIKKAQKKQ------GVIILTDPDFPGE 61 (174)
T ss_pred cchHHHHHHHhcCc---eEEEECCCcc--CHHHHHHHHHHhhcC------CEEEEeCCCCchH
Confidence 78899999888852 3444555442 223467777778888 9999999887663
No 458
>PRK07476 eutB threonine dehydratase; Provisional
Probab=28.04 E-value=3.2e+02 Score=25.47 Aligned_cols=52 Identities=19% Similarity=0.026 Sum_probs=36.7
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (356)
.+..++|..+...|+.+... | -+-.|++|...-......++.+|++|+.++-
T Consensus 70 vv~aSsGN~g~alA~~a~~~---------G---~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~ 121 (322)
T PRK07476 70 VVTASTGNHGRALAYAARAL---------G---IRATICMSRLVPANKVDAIRALGAEVRIVGR 121 (322)
T ss_pred EEEECCChHHHHHHHHHHHh---------C---CCEEEEeCCCCCHHHHHHHHHcCCEEEEECC
Confidence 45666777777777665532 1 1247888887767777888899999988873
No 459
>COG0313 Predicted methyltransferases [General function prediction only]
Probab=27.91 E-value=2.5e+02 Score=25.73 Aligned_cols=80 Identities=9% Similarity=-0.008 Sum_probs=54.8
Q ss_pred eEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhcc
Q 018437 156 NIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEET 235 (356)
Q Consensus 156 ~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~ 235 (356)
.+|..+.+-. -.+.+..+|++...+-..+.+-.-....|...+...-.+-.++-.-+| +.-||=-.+++.|++.
T Consensus 32 D~iaaEDTR~-t~~LL~~~~I~~~~is~h~hne~~~~~~li~~l~~g~~valVSDAG~P-~ISDPG~~LV~~a~~~---- 105 (275)
T COG0313 32 DVIAAEDTRV-TRKLLSHLGIKTPLISYHEHNEKEKLPKLIPLLKKGKSVALVSDAGTP-LISDPGYELVRAAREA---- 105 (275)
T ss_pred CEEEEeccHH-HHHHHHHhCCCCceecccCCcHHHHHHHHHHHHhcCCeEEEEecCCCC-cccCccHHHHHHHHHc----
Confidence 4566565543 356777889987777776543444556677777665344444555566 7789999999999999
Q ss_pred CCCCcEEE
Q 018437 236 GWDTPIHV 243 (356)
Q Consensus 236 ~~~~~l~v 243 (356)
|+.+++
T Consensus 106 --gi~V~~ 111 (275)
T COG0313 106 --GIRVVP 111 (275)
T ss_pred --CCcEEe
Confidence 886654
No 460
>TIGR02964 xanthine_xdhC xanthine dehydrogenase accessory protein XdhC. Members of this protein family are the accessory protein XdhC for insertion of the molybdenum cofactor into the xanthine dehydrogenase large chain, XdhB, in bacteria. This protein is not part of the mature xanthine dehydrogenase. Xanthine dehydrogenase is an enzyme for purine catabolism, from other purines to xanthine to urate to further breakdown products.
Probab=27.81 E-value=2.4e+02 Score=25.36 Aligned_cols=73 Identities=16% Similarity=0.130 Sum_probs=48.8
Q ss_pred CCeEEecCCCcch--HHHHHHhhCCeeEEEEecCCc----cc--------cCHHHHHHHHhhCceEEEEecCCCcccccC
Q 018437 154 KPNIVTGANVQVC--WEKFARYFEVELKEVKLEEGY----YV--------MNPVKAVELVDENTICVAAILGSTLTGEFE 219 (356)
Q Consensus 154 ~~~vi~s~~~h~s--~~~~~~~~G~~v~~v~~~~~~----~~--------~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~ 219 (356)
.+++++-...|.+ +.+.++.+|..|+.++-+++. .. .++++..+.+++++.+|++++...-
T Consensus 100 ~~~L~IfGaG~va~~la~la~~lGf~V~v~D~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~vvi~th~h~~----- 174 (246)
T TIGR02964 100 APHVVLFGAGHVGRALVRALAPLPCRVTWVDSREAEFPEDLPDGVATLVTDEPEAEVAEAPPGSYFLVLTHDHAL----- 174 (246)
T ss_pred CCEEEEECCcHHHHHHHHHHhcCCCEEEEEeCCcccccccCCCCceEEecCCHHHHHhcCCCCcEEEEEeCChHH-----
Confidence 4688888888876 667788889999888754320 00 1234444445567888888876554
Q ss_pred CHHHHHHHHHHh
Q 018437 220 DVKLLHDLLTKK 231 (356)
Q Consensus 220 ~i~~I~~i~~~~ 231 (356)
|.+.+..+.++.
T Consensus 175 D~~~L~~aL~~~ 186 (246)
T TIGR02964 175 DLELCHAALRRG 186 (246)
T ss_pred HHHHHHHHHhCC
Confidence 777777777555
No 461
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=27.32 E-value=4.2e+02 Score=23.16 Aligned_cols=94 Identities=9% Similarity=0.003 Sum_probs=47.6
Q ss_pred EEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCe-EEe--cC---------CCcchHHHHHHhhCCeeEEEEecCCcc
Q 018437 121 VGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPN-IVT--GA---------NVQVCWEKFARYFEVELKEVKLEEGYY 188 (356)
Q Consensus 121 ~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~-vi~--s~---------~~h~s~~~~~~~~G~~v~~v~~~~~~~ 188 (356)
+..|||..+...+.++... |. ... +++ +. .........++.+|++...++++.. .
T Consensus 2 vl~SGGkDS~~al~~a~~~---------G~---~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgip~~~i~~~~~-~ 68 (218)
T TIGR03679 2 ALYSGGKDSNYALYKALEE---------GH---EVRCLITVVPENEESYMFHTPNIELTRLQAEALGIPLVKIETSGE-K 68 (218)
T ss_pred eeecCcHHHHHHHHHHHHc---------CC---EEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCCCEEEEECCCC-C
Confidence 4678999998877665432 11 111 112 11 1223456777888999888887631 1
Q ss_pred ccCHHHHHHHHhh----CceEEEEecCCCcccccCCHHHHHHHHHHh
Q 018437 189 VMNPVKAVELVDE----NTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (356)
Q Consensus 189 ~~d~~~L~~~i~~----~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~ 231 (356)
....+.|.+++.+ ....|+ .|.+..- ..-..+..+|.+.
T Consensus 69 ~~~~~~l~~~l~~~~~~g~~~vv--~G~i~sd--~~~~~~e~v~~~~ 111 (218)
T TIGR03679 69 EKEVEDLKGALKELKREGVEGIV--TGAIASR--YQKSRIERICEEL 111 (218)
T ss_pred hHHHHHHHHHHHHHHHcCCCEEE--ECCcccH--hHHHHHHHHHHhC
Confidence 2223345554432 223232 3333321 1234455677666
No 462
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=27.24 E-value=1.5e+02 Score=20.46 Aligned_cols=66 Identities=12% Similarity=0.010 Sum_probs=33.4
Q ss_pred eEEecCCCcchHHHH---HHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHH
Q 018437 156 NIVTGANVQVCWEKF---ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLL 224 (356)
Q Consensus 156 ~vi~s~~~h~s~~~~---~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I 224 (356)
.++++.+..+...++ ++..|++...++++++ .-..+++.+.....+.=+++. .....|..+++.++
T Consensus 3 v~ly~~~~C~~C~ka~~~L~~~gi~~~~~di~~~--~~~~~el~~~~g~~~vP~v~i-~~~~iGg~~~~~~~ 71 (73)
T cd03027 3 VTIYSRLGCEDCTAVRLFLREKGLPYVEINIDIF--PERKAELEERTGSSVVPQIFF-NEKLVGGLTDLKSL 71 (73)
T ss_pred EEEEecCCChhHHHHHHHHHHCCCceEEEECCCC--HHHHHHHHHHhCCCCcCEEEE-CCEEEeCHHHHHhh
Confidence 345555555444444 4456888888888753 112334444433322112222 33555777666654
No 463
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=27.06 E-value=40 Score=30.56 Aligned_cols=34 Identities=24% Similarity=0.241 Sum_probs=28.8
Q ss_pred cCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccc
Q 018437 210 LGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (356)
Q Consensus 210 ~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~ 249 (356)
..+.-.|+.++++++++.|+++ |+.+++|-+...
T Consensus 43 ~vd~~~Gt~~d~~~Lv~~~h~~------gi~VilD~V~NH 76 (316)
T PF00128_consen 43 AVDPRFGTMEDFKELVDAAHKR------GIKVILDVVPNH 76 (316)
T ss_dssp EESTTTBHHHHHHHHHHHHHHT------TCEEEEEEETSE
T ss_pred ccccccchhhhhhhhhhccccc------cceEEEeeeccc
Confidence 3556678899999999999999 999999987643
No 464
>TIGR00096 probable S-adenosylmethionine-dependent methyltransferase, YraL family. No member of this family is characterized, but Pfam model pfam00590 (tetrapyrrole methylase) demonstrates homology between this family and its other members, which include several methylases for the tetrapyrrole class of compound, as well as the enzyme diphthine synthase.
Probab=27.02 E-value=5e+02 Score=23.86 Aligned_cols=81 Identities=4% Similarity=-0.102 Sum_probs=54.4
Q ss_pred CeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhc
Q 018437 155 PNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEE 234 (356)
Q Consensus 155 ~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~ 234 (356)
..+|..+.+..+ .+....+++.-..+...+.+..-..+.+.+.+...-.+.+++-.-+| +.-||=..|++.|++.
T Consensus 26 ~d~i~~EDTR~t-~kLL~~~~I~~~~~~~~~hn~~~~~~~l~~~l~~g~~valvSDAG~P-~ISDPG~~LV~~~~~~--- 100 (276)
T TIGR00096 26 VDLFAEEDTRTS-KLLLHLGIIATPKAFHIDNEFQEKQNLLAAKLEIGNNIAVSSDAGPP-LISDPGHLLVACREKA--- 100 (276)
T ss_pred CCEEEecCchhH-HHHHHhcCCCCceEEEecccHhHHHHHHHHHHHcCCcEEEEecCCCC-CcCCccHHHHHHHHHC---
Confidence 457777777644 56667778875566665543444455666666554345556666677 8889999999999999
Q ss_pred cCCCCcEEE
Q 018437 235 TGWDTPIHV 243 (356)
Q Consensus 235 ~~~~~~l~v 243 (356)
|+.+.+
T Consensus 101 ---~i~v~~ 106 (276)
T TIGR00096 101 ---NIIVVP 106 (276)
T ss_pred ---CCeEEc
Confidence 875544
No 465
>PRK08813 threonine dehydratase; Provisional
Probab=27.00 E-value=1.6e+02 Score=28.08 Aligned_cols=51 Identities=8% Similarity=-0.081 Sum_probs=36.9
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEE
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVK 182 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~ 182 (356)
++.+|+|..+.-+|..+.... -+-.|++|...-......++.+|++++.++
T Consensus 84 VV~aSsGN~G~alA~aa~~~G------------i~~~IvvP~~~~~~K~~~i~~~GAeVv~~g 134 (349)
T PRK08813 84 VICASAGNHAQGVAWSAYRLG------------VQAITVMPHGAPQTKIAGVAHWGATVRQHG 134 (349)
T ss_pred EEEECCCHHHHHHHHHHHHcC------------CCEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Confidence 567778888877776655431 134788888777677778888999998774
No 466
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=26.87 E-value=3.2e+02 Score=22.87 Aligned_cols=73 Identities=10% Similarity=-0.082 Sum_probs=45.8
Q ss_pred eEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCH----HHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHh
Q 018437 156 NIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNP----VKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (356)
Q Consensus 156 ~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~----~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~ 231 (356)
+++.-......+..++...|++++... +..|+ |+++-+.+++.-.+++.++.. |+..++..+++.
T Consensus 60 R~Y~~a~a~~~l~~~l~~~Gf~pv~~k-----G~~Dv~laIDame~~~~~~iD~~vLvSgD~------DF~~Lv~~lre~ 128 (160)
T TIGR00288 60 KVLLNQYASDKLIEAVVNQGFEPIIVA-----GDVDVRMAVEAMELIYNPNIDAVALVTRDA------DFLPVINKAKEN 128 (160)
T ss_pred EEEechhccHHHHHHHHHCCceEEEec-----CcccHHHHHHHHHHhccCCCCEEEEEeccH------hHHHHHHHHHHC
Confidence 344443444566777778888876432 34454 444444345555666655544 588889999999
Q ss_pred hhccCCCCcEEEec
Q 018437 232 NEETGWDTPIHVDA 245 (356)
Q Consensus 232 ~~~~~~~~~l~vD~ 245 (356)
|..+++=|
T Consensus 129 ------G~~V~v~g 136 (160)
T TIGR00288 129 ------GKETIVIG 136 (160)
T ss_pred ------CCEEEEEe
Confidence 88877744
No 467
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=26.60 E-value=1.4e+02 Score=27.49 Aligned_cols=74 Identities=11% Similarity=-0.028 Sum_probs=47.9
Q ss_pred CHHHHHHHHhh----CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEE-ecccccccccccCCCCcccccC
Q 018437 191 NPVKAVELVDE----NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV-DAASGGFIAPFLYPDLEWDFRL 265 (356)
Q Consensus 191 d~~~L~~~i~~----~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~v-D~a~~~~~~~~~~~~~~~~~~~ 265 (356)
|.+.+.++|+. ++..++ -+||-|.++.-.+|+++.++++. .+.++| +-|.+++.+ . .
T Consensus 76 dse~v~raI~~~~~~~~IdLi---i~TpGG~v~AA~~I~~~l~~~~~----~v~v~VP~~A~SAGTl--------I---A 137 (285)
T PF01972_consen 76 DSEFVLRAIREAPKDKPIDLI---IHTPGGLVDAAEQIARALREHPA----KVTVIVPHYAMSAGTL--------I---A 137 (285)
T ss_pred hHHHHHHHHHhcCCCCceEEE---EECCCCcHHHHHHHHHHHHhCCC----CEEEEECcccccHHHH--------H---H
Confidence 34556666643 233333 36888999999999999999954 344444 666666554 1 1
Q ss_pred CCceEEEEcCCcCCCCCc
Q 018437 266 PLVKSINVSGHKYGLVYA 283 (356)
Q Consensus 266 ~~~Ds~~~~~hK~l~~P~ 283 (356)
..+|-+..++|-.+ +|.
T Consensus 138 LaADeIvM~p~a~L-Gpi 154 (285)
T PF01972_consen 138 LAADEIVMGPGAVL-GPI 154 (285)
T ss_pred HhCCeEEECCCCcc-CCC
Confidence 36888888888776 443
No 468
>TIGR00177 molyb_syn molybdenum cofactor synthesis domain. The Drosophila protein cinnamon, the Arabidopsis protein cnx1, and rat protein gephyrin each have one domain like MoeA and one like MoaB and Mog. These domains are, however, distantly related to each other, as captured by this model. Gephyrin is unusual in that it seems to be a tubulin-binding neuroprotein involved in the clustering of both blycine receptors and GABA receptors, rather than a protein of molybdenum cofactor biosynthesis.
Probab=26.55 E-value=3e+02 Score=22.20 Aligned_cols=57 Identities=11% Similarity=0.078 Sum_probs=34.6
Q ss_pred CCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh---CceEEEEecCCCcccccCCHHH
Q 018437 162 NVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFEDVKL 223 (356)
Q Consensus 162 ~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~~~i~~ 223 (356)
..-+.+...++..|+++..+.+-.+ |.+.|.+++.+ +..+|+.+ |.+..|..|-..+
T Consensus 27 ~n~~~l~~~l~~~G~~v~~~~~v~D----d~~~i~~~l~~~~~~~DliItt-GG~g~g~~D~t~~ 86 (144)
T TIGR00177 27 SNGPLLAALLEEAGFNVSRLGIVPD----DPEEIREILRKAVDEADVVLTT-GGTGVGPRDVTPE 86 (144)
T ss_pred CcHHHHHHHHHHCCCeEEEEeecCC----CHHHHHHHHHHHHhCCCEEEEC-CCCCCCCCccHHH
Confidence 3344677778888999888776444 45556655543 34556555 5455466665444
No 469
>PF01976 DUF116: Protein of unknown function DUF116; InterPro: IPR002829 These archaeal and bacterial proteins have no known function. Members of this family contain seven conserved cysteines and may also be an integral membrane protein.
Probab=26.52 E-value=3.8e+02 Score=22.32 Aligned_cols=72 Identities=14% Similarity=0.098 Sum_probs=44.8
Q ss_pred HHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHH---hhCCeeEE
Q 018437 104 IAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFAR---YFEVELKE 180 (356)
Q Consensus 104 la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~---~~G~~v~~ 180 (356)
+++-+|+. ..+.+|||.+-. ..++. +++.++.-..+.-+.+... ..|+.+.-
T Consensus 81 lae~~g~~--------v~i~~Ggt~ar~----~ik~~-------------~p~~iigVAC~~dL~~g~~~~~~~~ip~~g 135 (158)
T PF01976_consen 81 LAEKYGYK--------VYIATGGTLARK----IIKEY-------------RPKAIIGVACERDLISGIQDLKPLGIPVQG 135 (158)
T ss_pred HHHHcCCE--------EEEEcChHHHHH----HHHHh-------------CCCEEEEEechHHHHHHHHHHhhcCCCeeE
Confidence 67777886 577788876632 22221 3556665555554444444 34678888
Q ss_pred EEecCC---ccccCHHHHHHHHh
Q 018437 181 VKLEEG---YYVMNPVKAVELVD 200 (356)
Q Consensus 181 v~~~~~---~~~~d~~~L~~~i~ 200 (356)
|+.+.+ +-.+|.+.|+++|+
T Consensus 136 V~l~~~gC~~T~Vd~~~v~~~i~ 158 (158)
T PF01976_consen 136 VLLDRPGCINTDVDWEKVEEAIQ 158 (158)
T ss_pred EEeCCCCcCCCcccHHHHHHHhC
Confidence 888653 24778889988763
No 470
>PRK00685 metal-dependent hydrolase; Provisional
Probab=26.49 E-value=4.2e+02 Score=22.82 Aligned_cols=75 Identities=12% Similarity=0.137 Sum_probs=46.3
Q ss_pred eEEecCCCcc-h-HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh-CceEEEEecCCCcccccCCHHHHHHHHHHh
Q 018437 156 NIVTGANVQV-C-WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (356)
Q Consensus 156 ~vi~s~~~h~-s-~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~ 231 (356)
.++.+..+-+ . .....+..++.+..+|+.. .+.+++++..+.... +++.++.+|-.+......+.+++.+.+++.
T Consensus 136 ~i~~~GDt~~~~~~~~~~~~~~~D~~~~~~~~-~~h~~~~ea~~~~~~~~~k~~v~~H~~~~~~~~~~~~~~~~~~~~~ 213 (228)
T PRK00685 136 TIYHAGDTGLFSDMKLIGELHKPDVALLPIGD-NFTMGPEDAALAVELIKPKIVIPMHYNTFPLIEQDPEKFKALVEGL 213 (228)
T ss_pred EEEEecCccchhHHHHHHHhhCCCEEEEecCC-ccccCHHHHHHHHHhhCCCEEEEeccCCCcCCcCCHHHHHHHHHhc
Confidence 5555544432 2 3333334567887788754 367888777666554 567787777655434445678887777764
No 471
>cd06319 PBP1_ABC_sugar_binding_like_10 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=26.45 E-value=2.9e+02 Score=24.28 Aligned_cols=14 Identities=7% Similarity=0.102 Sum_probs=6.1
Q ss_pred HHHHHHhhCceEEE
Q 018437 194 KAVELVDENTICVA 207 (356)
Q Consensus 194 ~L~~~i~~~~~~v~ 207 (356)
.++..+..++..++
T Consensus 47 ~i~~~~~~~~dgii 60 (277)
T cd06319 47 NLRTAIDKGVSGII 60 (277)
T ss_pred HHHHHHhcCCCEEE
Confidence 34444444444444
No 472
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase. This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.
Probab=26.34 E-value=1.3e+02 Score=29.68 Aligned_cols=53 Identities=8% Similarity=-0.105 Sum_probs=39.5
Q ss_pred CeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe
Q 018437 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (356)
Q Consensus 119 ~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (356)
.++..|+|..+.-.|+.+...- -+-.|++|...-..-...++.+|++|+.++-
T Consensus 154 ~Vv~aSsGN~G~slA~~Aa~lG------------~~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~ 206 (431)
T TIGR02035 154 SIAVGSTGNLGLSIGIISAALG------------FQVTVHMSADAKQWKKDKLRSKGVTVVEYES 206 (431)
T ss_pred eEEEECccHHHHHHHHHHHHcC------------CCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 3566778888888877766431 1347889988877788888899999988874
No 473
>cd01542 PBP1_TreR_like Ligand-binding domain of DNA transcription repressor specific for trehalose (TreR) which is a member of the LacI-GalR family of bacterial transcription regulators. Ligand-binding domain of DNA transcription repressor specific for trehalose (TreR) which is a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of TreR is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type I periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type I periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding wh
Probab=26.12 E-value=3.7e+02 Score=23.27 Aligned_cols=8 Identities=25% Similarity=0.015 Sum_probs=3.2
Q ss_pred CceEEEEe
Q 018437 202 NTICVAAI 209 (356)
Q Consensus 202 ~~~~v~~~ 209 (356)
+..+|.+.
T Consensus 78 ~ipvv~~~ 85 (259)
T cd01542 78 NVPVVVVG 85 (259)
T ss_pred CCCEEEEe
Confidence 33344443
No 474
>PRK06815 hypothetical protein; Provisional
Probab=25.94 E-value=2e+02 Score=26.85 Aligned_cols=52 Identities=10% Similarity=-0.087 Sum_probs=35.5
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (356)
.+..++|..+..+|..+... | -+-.|++|...-......++.+|++|+.++-
T Consensus 71 vv~aSsGN~g~alA~~a~~~---------G---~~~~i~~p~~~~~~k~~~~~~~GA~V~~~~~ 122 (317)
T PRK06815 71 VITASSGNHGQGVALAAKLA---------G---IPVTVYAPEQASAIKLDAIRALGAEVRLYGG 122 (317)
T ss_pred EEEECCChHHHHHHHHHHHh---------C---CCEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 45566777776666654432 1 1247888877766677788889999998875
No 475
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=25.65 E-value=2.7e+02 Score=25.52 Aligned_cols=61 Identities=10% Similarity=0.154 Sum_probs=37.6
Q ss_pred CcchHHHHHHhhCCeeEEEE-ecCCccccCHHHHHHHH---hh-CceEEEEecCCCcccccCCHHHHHHHHHHh
Q 018437 163 VQVCWEKFARYFEVELKEVK-LEEGYYVMNPVKAVELV---DE-NTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (356)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~v~-~~~~~~~~d~~~L~~~i---~~-~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~ 231 (356)
.|.++...++.+|++++.+- ... .....+.+|.+.+ ++ +.++|+. -+..+. +.+..++++.
T Consensus 183 ~H~af~Y~~~~yGl~~~~~~~~~~-~~eps~~~l~~l~~~ik~~~v~~if~-e~~~~~------~~~~~ia~~~ 248 (287)
T cd01137 183 SEGAFSYFAKAYGLKEAYLWPINT-EEEGTPKQVATLIEQVKKEKVPAVFV-ESTVND------RLMKQVAKET 248 (287)
T ss_pred ecccHHHHHHHcCCeEeecccCCC-CCCCCHHHHHHHHHHHHHhCCCEEEE-eCCCCh------HHHHHHHHHh
Confidence 46778888899999977543 222 2566676666555 33 4555653 333331 5566788888
No 476
>PRK10717 cysteine synthase A; Provisional
Probab=25.22 E-value=1.4e+02 Score=27.94 Aligned_cols=53 Identities=26% Similarity=0.129 Sum_probs=38.7
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (356)
++.+++|..+..+|+.+.+. | -+-.|++|...-......++.+|++|+.++-+
T Consensus 67 vv~aSsGN~g~alA~~a~~~---------G---~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~~ 119 (330)
T PRK10717 67 IVEGTAGNTGIGLALVAAAR---------G---YKTVIVMPETQSQEKKDLLRALGAELVLVPAA 119 (330)
T ss_pred EEEeCCcHHHHHHHHHHHHc---------C---CcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCc
Confidence 56677888887777765532 1 12478898887667788888999999988853
No 477
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=25.13 E-value=6e+02 Score=24.16 Aligned_cols=96 Identities=18% Similarity=0.074 Sum_probs=46.7
Q ss_pred ccCHHHHHHHHhhCceEEEEe--cCCCc-----cccc-CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCc
Q 018437 189 VMNPVKAVELVDENTICVAAI--LGSTL-----TGEF-EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE 260 (356)
Q Consensus 189 ~~d~~~L~~~i~~~~~~v~~~--~~~~~-----tG~~-~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~ 260 (356)
-.+++..+++++....+|.+. .+++- +|+- -.+.+|.++++.. .+.++.++.|+-.-. ..+..
T Consensus 158 V~T~e~a~~Li~aGAD~ikVgiGpGSicttR~~~Gvg~pqltAv~~~a~aa---~~~~v~VIaDGGIr~------~gDI~ 228 (343)
T TIGR01305 158 VVTGEMVEELILSGADIVKVGIGPGSVCTTRTKTGVGYPQLSAVIECADAA---HGLKGHIISDGGCTC------PGDVA 228 (343)
T ss_pred ccCHHHHHHHHHcCCCEEEEcccCCCcccCceeCCCCcCHHHHHHHHHHHh---ccCCCeEEEcCCcCc------hhHHH
Confidence 667777777776544444322 22222 2222 2355555544433 011789999974211 01110
Q ss_pred ccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCC
Q 018437 261 WDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (356)
Q Consensus 261 ~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~ 295 (356)
--+ -.|+|++-+.+ -+.++-.+.|=++..+...
T Consensus 229 KAL-A~GAd~VMlG~-llAG~~Espg~~i~~~G~~ 261 (343)
T TIGR01305 229 KAF-GAGADFVMLGG-MFAGHTESGGEVIERNGRK 261 (343)
T ss_pred HHH-HcCCCEEEECH-hhhCcCcCcceeEeECCEE
Confidence 111 34788887772 2233444555555555433
No 478
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.96 E-value=2.7e+02 Score=22.19 Aligned_cols=50 Identities=10% Similarity=0.001 Sum_probs=34.0
Q ss_pred cCCCcchHHHHHHhhCCeeEEEEecCCccccCH---HHHHHHHhh--CceEEEEecC
Q 018437 160 GANVQVCWEKFARYFEVELKEVKLEEGYYVMNP---VKAVELVDE--NTICVAAILG 211 (356)
Q Consensus 160 s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~---~~L~~~i~~--~~~~v~~~~~ 211 (356)
+.|...+...+++..|+...+||+.. ..++. +.+.+++++ .|.+..+-++
T Consensus 43 ~QP~~~~i~~aa~~aGl~y~~iPV~~--~~iT~~dV~~f~~Al~eaegPVlayCrsG 97 (130)
T COG3453 43 GQPGFAAIAAAAEAAGLTYTHIPVTG--GGITEADVEAFQRALDEAEGPVLAYCRSG 97 (130)
T ss_pred CCCChHHHHHHHHhcCCceEEeecCC--CCCCHHHHHHHHHHHHHhCCCEEeeecCC
Confidence 45667778899999999999999975 35554 555566664 4544443333
No 479
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD). This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. The domain is presumed to bind molybdopterin.
Probab=24.96 E-value=3.3e+02 Score=21.57 Aligned_cols=57 Identities=12% Similarity=-0.008 Sum_probs=33.8
Q ss_pred CCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh---CceEEEEecCCCcccccCCHHH
Q 018437 162 NVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFEDVKL 223 (356)
Q Consensus 162 ~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~~~i~~ 223 (356)
...+.+...++..|.++....+-.+ |.+.+++++.+ +..+|+.+ |-+..|..|-..+
T Consensus 19 ~n~~~l~~~l~~~G~~v~~~~~v~D----d~~~i~~~i~~~~~~~Dlvitt-GG~g~g~~D~t~~ 78 (133)
T cd00758 19 TNGPALEALLEDLGCEVIYAGVVPD----DADSIRAALIEASREADLVLTT-GGTGVGRRDVTPE 78 (133)
T ss_pred chHHHHHHHHHHCCCEEEEeeecCC----CHHHHHHHHHHHHhcCCEEEEC-CCCCCCCCcchHH
Confidence 3344566777788999888766443 45555555543 34555544 5455576665544
No 480
>cd06322 PBP1_ABC_sugar_binding_like_12 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. This group includes the periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consist of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=24.78 E-value=3.2e+02 Score=23.89 Aligned_cols=16 Identities=0% Similarity=0.115 Sum_probs=7.4
Q ss_pred HHHHHHhhCceEEEEe
Q 018437 194 KAVELVDENTICVAAI 209 (356)
Q Consensus 194 ~L~~~i~~~~~~v~~~ 209 (356)
.++..+..++..+++.
T Consensus 47 ~~~~~~~~~vdgiii~ 62 (267)
T cd06322 47 DVEDFITKKVDAIVLS 62 (267)
T ss_pred HHHHHHHcCCCEEEEc
Confidence 3444444455555543
No 481
>PTZ00323 NAD+ synthase; Provisional
Probab=24.74 E-value=5.7e+02 Score=23.72 Aligned_cols=102 Identities=9% Similarity=0.028 Sum_probs=52.1
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+.+.+.-.....++.. ........+++++.+ .|.+ ..++.-|||-.+...+..+.+.-
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~L~~~l~~-~g~~------~vVVglSGGVDSav~aaLa~~al------ 70 (294)
T PTZ00323 6 PLHPELQRVLKEVRRKRAFNPAA--WIEKKCAKLNEYMRR-CGLK------GCVTSVSGGIDSAVVLALCARAM------ 70 (294)
T ss_pred cCCHHHHHHHHHhCCCCCCCHHH--HHHHHHHHHHHHHHH-cCCC------cEEEECCCCHHHHHHHHHHHHHh------
Confidence 34577777776654433333322 222223333333333 3443 24677889998887776665431
Q ss_pred hcCCCCCC-CeEE-ecCCCc------chHHHHHHhhCCeeEEEEecC
Q 018437 147 EQGKPYDK-PNIV-TGANVQ------VCWEKFARYFEVELKEVKLEE 185 (356)
Q Consensus 147 ~~g~~~~~-~~vi-~s~~~h------~s~~~~~~~~G~~v~~v~~~~ 185 (356)
|..... ..++ +..+.+ ......++.+|++.+.|++++
T Consensus 71 --g~~~~~~~~~~~v~~P~~ss~~~~~~A~~la~~lGi~~~~idi~~ 115 (294)
T PTZ00323 71 --RMPNSPIQKNVGLCQPIHSSAWALNRGRENIQACGATEVTVDQTE 115 (294)
T ss_pred --ccccCCceEEEEEECCCCCCHHHHHHHHHHHHHhCCcEEEEECcH
Confidence 100000 1111 122223 234566778899999998875
No 482
>COG1038 PycA Pyruvate carboxylase [Energy production and conversion]
Probab=24.65 E-value=2.4e+02 Score=30.13 Aligned_cols=36 Identities=22% Similarity=0.254 Sum_probs=30.7
Q ss_pred CCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccccccc
Q 018437 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP 253 (356)
Q Consensus 211 ~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~ 253 (356)
|.++ |.+++++++.++++++ |.++++-+++||+...
T Consensus 138 pgt~-~~~~~~ee~~~fa~~~------gyPvmiKA~~GGGGRG 173 (1149)
T COG1038 138 PGTD-GPIETIEEALEFAEEY------GYPVMIKAAAGGGGRG 173 (1149)
T ss_pred CCCC-CCcccHHHHHHHHHhc------CCcEEEEEccCCCccc
Confidence 4444 7788999999999999 9999999999987653
No 483
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=24.59 E-value=5.2e+02 Score=23.24 Aligned_cols=66 Identities=17% Similarity=0.158 Sum_probs=40.0
Q ss_pred CcchHHHHHHhhCCeeEEEEecCCccccCHHHHH---HHHhh-CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCC
Q 018437 163 VQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAV---ELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWD 238 (356)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~---~~i~~-~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~ 238 (356)
.|.++...++.+|+++..+.. + ...+.+..|. +.+++ +.++|+.. ++.+. +.+..++++. |
T Consensus 176 ~H~af~Y~~~~ygl~~~~~~~-~-~~eps~~~l~~l~~~ik~~~v~~if~e-~~~~~------~~~~~la~~~------g 240 (266)
T cd01018 176 YHPAWGYFARDYGLTQIPIEE-E-GKEPSPADLKRLIDLAKEKGVRVVFVQ-PQFST------KSAEAIAREI------G 240 (266)
T ss_pred ECchhHHHHHHcCCEEEecCC-C-CCCCCHHHHHHHHHHHHHcCCCEEEEc-CCCCc------HHHHHHHHHc------C
Confidence 577888899999999876532 2 2456555554 44544 45556544 33332 3445778888 7
Q ss_pred CcEEE
Q 018437 239 TPIHV 243 (356)
Q Consensus 239 ~~l~v 243 (356)
+.++.
T Consensus 241 ~~v~~ 245 (266)
T cd01018 241 AKVVT 245 (266)
T ss_pred CeEEE
Confidence 75543
No 484
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]
Probab=24.30 E-value=5e+02 Score=26.37 Aligned_cols=125 Identities=15% Similarity=0.145 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCe---EEecCCCc----ch
Q 018437 94 TELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPN---IVTGANVQ----VC 166 (356)
Q Consensus 94 ~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~---vi~s~~~h----~s 166 (356)
..+...+.+.+.+.+-.+. ..+++-|||-.+-..|..+.+.. . . ... -+-....+ ..
T Consensus 213 ~~l~~~l~~sV~~r~~adv-----pvg~~lSGGlDSS~Iaa~a~~~~-~---------~-~~~~~fsvg~~~~~~~D~~~ 276 (542)
T COG0367 213 EHLRSLLEDAVKRRLVADV-----PVGVFLSGGLDSSLIAAIAAEEL-G---------K-EGKTTFTVGFEDSDSPDAKY 276 (542)
T ss_pred HHHHHHHHHHHHHHhccCC-----cEEEEeCCCccHHHHHHHHHHhc-c---------c-cceeeeEeecCCCCCchHHH
Confidence 4455555555555553332 45899999988877766555432 0 0 011 11111221 12
Q ss_pred HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEE---
Q 018437 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV--- 243 (356)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~v--- 243 (356)
-...++.+|.+.+.+.+.+ +++.+++.+- +..+-.|.. .+...|+--+.+.+++. ++.++.
T Consensus 277 a~~~A~~lg~~h~~~~~~~-------~e~~~~~~~v--v~~~~~p~~-~~~~~ply~~~~~a~~~------g~kVvLSGe 340 (542)
T COG0367 277 ARAVAKFLGTPHHEIILTN-------EELLNALPEV--VKALDTPGG-MAASIPLYLLSRKARAE------GEKVVLSGE 340 (542)
T ss_pred HHHHHHHhCCCcEEEeecH-------HHHHHHHHHH--HhhcCCCCc-ccchhHHHHHHHhhhhc------CcEEeecCc
Confidence 3566777888766665543 4445544331 111112222 46667888899999999 877776
Q ss_pred --ecccccc
Q 018437 244 --DAASGGF 250 (356)
Q Consensus 244 --D~a~~~~ 250 (356)
|+.+||+
T Consensus 341 GADElFgGY 349 (542)
T COG0367 341 GADELFGGY 349 (542)
T ss_pred cHHHHhcCC
Confidence 6668876
No 485
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=24.22 E-value=2.2e+02 Score=23.07 Aligned_cols=58 Identities=5% Similarity=-0.111 Sum_probs=37.9
Q ss_pred HHHHHHhhCCeeEEEEecCCccccCHHHH-HHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHh
Q 018437 167 WEKFARYFEVELKEVKLEEGYYVMNPVKA-VELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (356)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L-~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~ 231 (356)
+...++..|.+|+.+.++- .++.+ +++.+.++.+|.+++-.+ .+...++++.+.+++.
T Consensus 21 v~~~l~~~GfeVi~LG~~v-----~~e~~v~aa~~~~adiVglS~l~~--~~~~~~~~~~~~l~~~ 79 (134)
T TIGR01501 21 LDHAFTNAGFNVVNLGVLS-----PQEEFIKAAIETKADAILVSSLYG--HGEIDCKGLRQKCDEA 79 (134)
T ss_pred HHHHHHHCCCEEEECCCCC-----CHHHHHHHHHHcCCCEEEEecccc--cCHHHHHHHHHHHHHC
Confidence 4455566788888776542 45554 445556777777766553 3445688888888887
No 486
>PLN02828 formyltetrahydrofolate deformylase
Probab=24.13 E-value=5.6e+02 Score=23.44 Aligned_cols=49 Identities=12% Similarity=0.080 Sum_probs=29.0
Q ss_pred eEEecCC---CcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEE
Q 018437 156 NIVTGAN---VQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVA 207 (356)
Q Consensus 156 ~vi~s~~---~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~ 207 (356)
.+++|++ ........++..|+.+..+|..+.+ ..-+++.+.+. ++.+|+
T Consensus 101 ~~ViSn~~~~~~a~~~~~A~~~gIP~~~~~~~~~~--~~e~~~~~~l~-~~DliV 152 (268)
T PLN02828 101 TCVISNHERGPNTHVMRFLERHGIPYHYLPTTKEN--KREDEILELVK-GTDFLV 152 (268)
T ss_pred EEEEeCCCCCCCchHHHHHHHcCCCEEEeCCCCCC--CHHHHHHHHHh-cCCEEE
Confidence 4556655 2335777888899999888875421 11244555555 354443
No 487
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=23.95 E-value=5.2e+02 Score=23.07 Aligned_cols=64 Identities=9% Similarity=0.046 Sum_probs=39.3
Q ss_pred HHHHhhCCeeEEE---EecCC--ccccCHHHHHHHHhh----CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCC
Q 018437 169 KFARYFEVELKEV---KLEEG--YYVMNPVKAVELVDE----NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDT 239 (356)
Q Consensus 169 ~~~~~~G~~v~~v---~~~~~--~~~~d~~~L~~~i~~----~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~ 239 (356)
...+..|++|..+ ....+ =++++++.+.+++.+ +..+|++++-|-.+ ++-|.++=++. |.
T Consensus 139 ~~l~~~G~eV~~~~~~~~~~~~~ia~i~p~~i~~~~~~~~~~~aDAifisCTnLrt-----~~vi~~lE~~l------Gk 207 (239)
T TIGR02990 139 QYFAVRGFEIVNFTCLGLTDDREMARISPDCIVEAALAAFDPDADALFLSCTALRA-----ATCAQRIEQAI------GK 207 (239)
T ss_pred HHHHhCCcEEeeeeccCCCCCceeeecCHHHHHHHHHHhcCCCCCEEEEeCCCchh-----HHHHHHHHHHH------CC
Confidence 3334458887665 22221 257899999888863 56677777544442 45555555667 88
Q ss_pred cEEE
Q 018437 240 PIHV 243 (356)
Q Consensus 240 ~l~v 243 (356)
+++.
T Consensus 208 PVls 211 (239)
T TIGR02990 208 PVVT 211 (239)
T ss_pred CEEE
Confidence 8754
No 488
>PRK13028 tryptophan synthase subunit beta; Provisional
Probab=23.80 E-value=3.6e+02 Score=26.29 Aligned_cols=52 Identities=13% Similarity=-0.106 Sum_probs=32.8
Q ss_pred eEE-eCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcc---hHHHHHHhhCCeeEEEEe
Q 018437 120 GVG-TVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV---CWEKFARYFEVELKEVKL 183 (356)
Q Consensus 120 ~~~-t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~---s~~~~~~~~G~~v~~v~~ 183 (356)
.++ |++|..+..+|..+.+.- -+-.|+++...-. .....++.+|++|+.++.
T Consensus 113 vI~etgsGnhG~A~A~aaa~~G------------l~~~I~m~~~d~~~q~~nv~~mr~~GAeVi~v~~ 168 (402)
T PRK13028 113 LIAETGAGQHGVATATAAALFG------------LECEIYMGEVDIERQHPNVFRMKLLGAEVVPVTR 168 (402)
T ss_pred EEEecCcHHHHHHHHHHHHHcC------------CCEEEEECCCcchhhHHHHHHHHHcCCEEEEEcC
Confidence 444 556777777776655431 1247787764332 234467889999998874
No 489
>TIGR02634 xylF D-xylose ABC transporter, substrate-binding protein. Members of this family are periplasmic (when in Gram-negative bacteria) binding proteins for D-xylose import by a high-affinity ATP-binding cassette (ABC) transporter.
Probab=23.74 E-value=2.8e+02 Score=25.22 Aligned_cols=15 Identities=33% Similarity=0.116 Sum_probs=6.0
Q ss_pred HHHHHhhCceEEEEe
Q 018437 195 AVELVDENTICVAAI 209 (356)
Q Consensus 195 L~~~i~~~~~~v~~~ 209 (356)
++++...+..+|.+.
T Consensus 72 l~~~~~~~iPvV~~d 86 (302)
T TIGR02634 72 VQEAKDEGIKVVAYD 86 (302)
T ss_pred HHHHHHCCCeEEEec
Confidence 333333344444443
No 490
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.
Probab=23.47 E-value=2.2e+02 Score=27.76 Aligned_cols=52 Identities=13% Similarity=-0.027 Sum_probs=38.0
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (356)
++..|+|..+.-+|..+... | -+-.|++|...-..-...++.+|++|+.++-
T Consensus 137 VV~aSsGN~G~alA~~a~~~---------G---~~~~IvvP~~~~~~K~~~ira~GAeVv~v~~ 188 (404)
T cd06447 137 IAVGSTGNLGLSIGIMAAAL---------G---FKVTVHMSADAKQWKKDKLRSKGVTVVEYET 188 (404)
T ss_pred EEEECccHHHHHHHHHHHHc---------C---CCEEEEECCCCcHHHHHHHHHCCCEEEEECC
Confidence 56667788887777665432 1 1347889988777788888899999998863
No 491
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=23.26 E-value=60 Score=32.35 Aligned_cols=33 Identities=18% Similarity=0.090 Sum_probs=28.2
Q ss_pred CCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccc
Q 018437 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (356)
Q Consensus 211 ~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~ 249 (356)
...-.|+.++++++++.|+++ |+.+++|.+...
T Consensus 73 id~~fGt~~dl~~Li~~~H~~------Gi~vi~D~V~NH 105 (479)
T PRK09441 73 VRTKYGTKEELLNAIDALHEN------GIKVYADVVLNH 105 (479)
T ss_pred cCcCcCCHHHHHHHHHHHHHC------CCEEEEEECccc
Confidence 345568899999999999999 999999998643
No 492
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=23.21 E-value=2e+02 Score=26.08 Aligned_cols=25 Identities=20% Similarity=0.292 Sum_probs=20.3
Q ss_pred ccCCHHHHHHHHHHhhhccCCCCcEEEeccc
Q 018437 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAAS 247 (356)
Q Consensus 217 ~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~ 247 (356)
..-+-+.+.++.+++ ++-+++|+.+
T Consensus 51 G~l~~e~l~~~l~e~------~i~llIDATH 75 (257)
T COG2099 51 GFLGAEGLAAFLREE------GIDLLIDATH 75 (257)
T ss_pred CcCCHHHHHHHHHHc------CCCEEEECCC
Confidence 345678899999999 9999999875
No 493
>TIGR02991 ectoine_eutB ectoine utilization protein EutB. Members of this protein family are EutB, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. Members of this family resemble threonine dehydratases.
Probab=23.16 E-value=2.2e+02 Score=26.53 Aligned_cols=52 Identities=17% Similarity=0.012 Sum_probs=36.5
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (356)
.+..++|..+.-+|..+.+.- -+-.|++|...-......++.+|++|+.++-
T Consensus 70 vv~aSsGN~g~alA~~a~~~G------------~~~~v~~p~~~~~~k~~~~~~~GA~V~~~~~ 121 (317)
T TIGR02991 70 VVAASTGNHGRALAYAAAEEG------------VRATICMSELVPQNKVDEIRRLGAEVRIVGR 121 (317)
T ss_pred EEEECCCHHHHHHHHHHHHhC------------CCEEEEcCCCCCHHHHHHHHHcCCEEEEeCC
Confidence 566667777877776655431 1347888877666677778889999988874
No 494
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=23.16 E-value=2.9e+02 Score=22.69 Aligned_cols=72 Identities=13% Similarity=0.042 Sum_probs=47.2
Q ss_pred CCeEEecCC---Ccch----HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHH
Q 018437 154 KPNIVTGAN---VQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHD 226 (356)
Q Consensus 154 ~~~vi~s~~---~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~ 226 (356)
+++|++-.. .|.. ..++.+-.|++|+..+... .--|.++++++++.-.|.++. ..-|..+.+..+.+
T Consensus 12 rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~~~----tp~e~v~aA~~~dv~vIgvSs--l~g~h~~l~~~lve 85 (143)
T COG2185 12 RPRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGLFQ----TPEEAVRAAVEEDVDVIGVSS--LDGGHLTLVPGLVE 85 (143)
T ss_pred CceEEEeccCccccccchHHHHHHHHhCCceEEecCCcC----CHHHHHHHHHhcCCCEEEEEe--ccchHHHHHHHHHH
Confidence 567776544 3543 4556666799998877532 224677778887765554332 22266778999999
Q ss_pred HHHHh
Q 018437 227 LLTKK 231 (356)
Q Consensus 227 i~~~~ 231 (356)
.++++
T Consensus 86 ~lre~ 90 (143)
T COG2185 86 ALREA 90 (143)
T ss_pred HHHHh
Confidence 99999
No 495
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=22.94 E-value=2.4e+02 Score=25.79 Aligned_cols=52 Identities=17% Similarity=-0.006 Sum_probs=33.9
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (356)
.+.+++|..+..+|..+... | -+-.+++|...-......++.+|++++.++-
T Consensus 68 iv~~ssGN~g~alA~~a~~~---------G---~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~ 119 (304)
T cd01562 68 VVAASAGNHAQGVAYAAKLL---------G---IPATIVMPETAPAAKVDATRAYGAEVVLYGE 119 (304)
T ss_pred EEEECCCHHHHHHHHHHHHc---------C---CCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 55566677776666554432 1 1246777776655567778889999888874
No 496
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=22.84 E-value=1.6e+02 Score=25.80 Aligned_cols=60 Identities=15% Similarity=0.136 Sum_probs=36.3
Q ss_pred ccCHHHHHHHHhh-----CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccc
Q 018437 189 VMNPVKAVELVDE-----NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGF 250 (356)
Q Consensus 189 ~~d~~~L~~~i~~-----~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~ 250 (356)
....+.|.+.|++ +.++|++. .+++.|...++++|.+..++..+ .+-.++.++|++.+++
T Consensus 28 ~~~~~~l~~~l~~a~~d~~ik~vvL~-~~s~gg~~~~~~el~~~i~~~~~-~~kpVia~~~~~~sgg 92 (222)
T cd07018 28 ELSLRDLLEALEKAAEDDRIKGIVLD-LDGLSGGLAKLEELRQALERFRA-SGKPVIAYADGYSQGQ 92 (222)
T ss_pred CccHHHHHHHHHHHhcCCCeEEEEEE-CCCCCCCHHHHHHHHHHHHHHHH-hCCeEEEEeCCCCchh
Confidence 4456666666643 34566655 46677888888888877765521 1115666777655443
No 497
>PRK14045 1-aminocyclopropane-1-carboxylate deaminase; Provisional
Probab=22.72 E-value=5.1e+02 Score=24.18 Aligned_cols=56 Identities=14% Similarity=0.030 Sum_probs=30.5
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch-HHHHHHhhCCeeEEEEec
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC-WEKFARYFEVELKEVKLE 184 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s-~~~~~~~~G~~v~~v~~~ 184 (356)
.++|.|+|.+|...-.++.-+. .| -+..++++...-.. ....++.+|++++.++.+
T Consensus 72 ~vv~~~~ssGN~g~alA~~a~~------~G---~~~~ivvp~~~~~~~~~~l~~~~Ga~v~~~~~~ 128 (329)
T PRK14045 72 VVITVGAVHSNHAFVTGLAAKK------LG---LDAVLVLRGKEELKGNYLLDKIMGIETRVYEAK 128 (329)
T ss_pred EEEEeCccHHHHHHHHHHHHHH------cC---CeEEEEEeCCCCCCcCHHHHHHCCCEEEEECCC
Confidence 4666666777765443332221 11 12467777543222 224567889998887753
No 498
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=22.69 E-value=3e+02 Score=26.99 Aligned_cols=53 Identities=17% Similarity=0.046 Sum_probs=37.2
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (356)
.+.+++|..+..+|..+.+. | -+-.|++|...-..-....+.+|++++.++-+
T Consensus 65 vv~~ssGN~g~alA~~a~~~---------G---~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~ 117 (454)
T TIGR01137 65 IIEPTSGNTGIGLALVAAIK---------G---YKCIIVLPEKMSNEKVDVLKALGAEIVRTPTA 117 (454)
T ss_pred EEEeCCcHHHHHHHHHHHHc---------C---CeEEEEeCCCcCHHHHHHHHHCCCEEEEcCCc
Confidence 56667778887777665532 1 12478888776566777888999999988743
No 499
>PRK02991 D-serine dehydratase; Provisional
Probab=22.66 E-value=2.6e+02 Score=27.59 Aligned_cols=51 Identities=12% Similarity=-0.007 Sum_probs=36.9
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEE
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVK 182 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~ 182 (356)
++..|+|..+.-.|..+.+. | -+-.|++|...-..-...++.+|++|+.++
T Consensus 160 VV~aSsGN~G~alA~aA~~~---------G---~~~tIvvP~~a~~~K~~~ir~~GAeVi~~~ 210 (441)
T PRK02991 160 IAVGSTGNLGLSIGIMSAAL---------G---FKVTVHMSADARQWKKDKLRSHGVTVVEYE 210 (441)
T ss_pred EEEECCcHHHHHHHHHHHHc---------C---CCEEEEECCCCCHHHHHHHHhCCCEEEEEC
Confidence 56667777777666655432 1 134889998887778888889999998776
No 500
>CHL00073 chlN photochlorophyllide reductase subunit N
Probab=22.63 E-value=1.4e+02 Score=29.74 Aligned_cols=45 Identities=20% Similarity=0.200 Sum_probs=30.0
Q ss_pred HHHHHHHhh-----CceEEEEecCCCccccc-CCHHHHHHHHH-HhhhccCCCCcEEEe
Q 018437 193 VKAVELVDE-----NTICVAAILGSTLTGEF-EDVKLLHDLLT-KKNEETGWDTPIHVD 244 (356)
Q Consensus 193 ~~L~~~i~~-----~~~~v~~~~~~~~tG~~-~~i~~I~~i~~-~~~~~~~~~~~l~vD 244 (356)
++|++++.+ ++++|+ ..++-++|.+ ||++.+++-++ ++ +++++.=
T Consensus 83 ~~L~~~i~ei~~~~~p~~if-v~~TC~t~iIGdDle~va~~~~~~~------gipVV~v 134 (457)
T CHL00073 83 EELKRLCLQIKKDRNPSVIV-WIGTCTTEIIKMDLEGMAPKLEAEI------GIPIVVA 134 (457)
T ss_pred HHHHHHHHHHHHhCCCCEEE-EEccCcHHhhccCHHHHHHHHHHhh------CCCEEEE
Confidence 466666543 455444 5566677888 99999976555 77 8877663
Done!