Query 018437
Match_columns 356
No_of_seqs 221 out of 2451
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 15:15:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018437.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018437hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbx_A GAD 1, glutamate decarb 100.0 4.9E-50 1.7E-54 397.7 35.1 355 1-355 1-355 (502)
2 2dgk_A GAD-beta, GADB, glutama 100.0 2.1E-46 7.1E-51 366.9 33.1 340 15-355 1-340 (452)
3 4e1o_A HDC, histidine decarbox 100.0 5.7E-43 1.9E-47 345.3 29.0 329 14-355 34-393 (481)
4 3k40_A Aromatic-L-amino-acid d 100.0 8.6E-43 2.9E-47 343.4 28.8 328 14-355 29-386 (475)
5 3vp6_A Glutamate decarboxylase 100.0 1.8E-41 6.3E-46 336.8 31.6 323 17-355 52-402 (511)
6 1js3_A DDC;, DOPA decarboxylas 100.0 2E-40 6.8E-45 327.4 27.8 325 18-355 33-389 (486)
7 2okj_A Glutamate decarboxylase 100.0 1E-39 3.6E-44 323.7 31.0 325 15-355 47-399 (504)
8 2jis_A Cysteine sulfinic acid 100.0 1.9E-38 6.6E-43 315.5 30.7 322 16-355 67-414 (515)
9 2qma_A Diaminobutyrate-pyruvat 100.0 1.8E-37 6.3E-42 307.1 29.5 318 21-355 62-407 (497)
10 3mc6_A Sphingosine-1-phosphate 100.0 2.3E-36 7.9E-41 298.9 26.8 309 30-355 36-358 (497)
11 3mad_A Sphingosine-1-phosphate 100.0 1.4E-34 4.8E-39 287.5 26.5 311 30-355 69-390 (514)
12 3f9t_A TDC, L-tyrosine decarbo 100.0 1.9E-33 6.4E-38 268.2 32.7 308 31-355 4-322 (397)
13 2z67_A O-phosphoseryl-tRNA(SEC 100.0 1.5E-32 5.2E-37 269.0 14.6 290 24-355 50-363 (456)
14 3bc8_A O-phosphoseryl-tRNA(SEC 100.0 1.6E-31 5.6E-36 257.6 14.8 291 24-355 15-331 (450)
15 1wyu_B Glycine dehydrogenase s 100.0 5.4E-27 1.8E-31 230.7 26.8 297 30-355 40-357 (474)
16 3nnk_A Ureidoglycine-glyoxylat 99.9 2.6E-26 8.9E-31 220.4 19.8 257 60-354 16-302 (411)
17 3hl2_A O-phosphoseryl-tRNA(SEC 99.9 4.2E-27 1.4E-31 224.4 13.7 296 24-355 33-349 (501)
18 4hvk_A Probable cysteine desul 99.9 1.4E-25 4.9E-30 212.5 22.9 253 65-354 9-268 (382)
19 4eb5_A Probable cysteine desul 99.9 1.5E-25 5E-30 212.9 21.8 253 65-354 9-268 (382)
20 3isl_A Purine catabolism prote 99.9 9.8E-26 3.4E-30 216.7 18.8 231 91-355 40-303 (416)
21 3lvm_A Cysteine desulfurase; s 99.9 8.6E-25 3E-29 210.9 25.1 261 60-354 26-296 (423)
22 3vax_A Putative uncharacterize 99.9 2.3E-25 8E-30 213.1 20.0 259 65-354 29-296 (400)
23 1eg5_A Aminotransferase; PLP-d 99.9 2.5E-24 8.5E-29 204.4 26.3 254 65-354 10-272 (384)
24 2z9v_A Aspartate aminotransfer 99.9 3.5E-25 1.2E-29 211.3 19.2 254 62-354 14-282 (392)
25 2huf_A Alanine glyoxylate amin 99.9 4.3E-25 1.5E-29 210.8 19.1 252 65-354 27-295 (393)
26 2dr1_A PH1308 protein, 386AA l 99.9 9.4E-25 3.2E-29 207.6 20.8 253 64-354 27-293 (386)
27 1vjo_A Alanine--glyoxylate ami 99.9 7.5E-25 2.6E-29 209.3 20.1 253 64-354 41-307 (393)
28 2yrr_A Aminotransferase, class 99.9 4.3E-26 1.5E-30 213.9 11.0 251 65-354 8-267 (353)
29 3kgw_A Alanine-glyoxylate amin 99.9 5.8E-25 2E-29 209.4 17.3 253 64-354 30-299 (393)
30 3zrp_A Serine-pyruvate aminotr 99.9 3.9E-25 1.3E-29 210.0 15.8 252 65-354 10-278 (384)
31 1wyu_A Glycine dehydrogenase ( 99.9 5.2E-24 1.8E-28 207.2 23.8 302 12-355 21-357 (438)
32 1t3i_A Probable cysteine desul 99.9 2.7E-24 9.3E-29 206.7 19.6 265 58-354 30-317 (420)
33 2ch1_A 3-hydroxykynurenine tra 99.9 4.2E-24 1.4E-28 204.1 20.4 251 66-354 27-294 (396)
34 1elu_A L-cysteine/L-cystine C- 99.9 2.6E-24 8.8E-29 204.9 18.6 255 65-354 25-309 (390)
35 3a9z_A Selenocysteine lyase; P 99.9 1.1E-23 3.6E-28 204.0 22.7 271 60-354 22-318 (432)
36 3cai_A Possible aminotransfera 99.9 2.5E-24 8.5E-29 206.5 17.0 263 60-354 30-315 (406)
37 1iug_A Putative aspartate amin 99.9 2.5E-24 8.5E-29 202.2 15.0 249 64-354 8-264 (352)
38 3e9k_A Kynureninase; kynurenin 99.9 3E-24 1E-28 210.3 15.9 233 92-354 108-368 (465)
39 1kmj_A Selenocysteine lyase; p 99.9 5E-24 1.7E-28 203.8 16.7 263 59-354 26-313 (406)
40 3f0h_A Aminotransferase; RER07 99.9 4.8E-24 1.6E-28 202.3 15.8 253 65-354 27-290 (376)
41 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 1.2E-23 4.2E-28 199.0 17.3 194 66-293 19-225 (371)
42 2bkw_A Alanine-glyoxylate amin 99.9 4.4E-24 1.5E-28 202.9 11.8 261 65-354 13-293 (385)
43 1m32_A 2-aminoethylphosphonate 99.9 6.6E-23 2.2E-27 193.1 18.8 252 65-354 12-278 (366)
44 3dzz_A Putative pyridoxal 5'-p 99.9 8.6E-23 2.9E-27 194.5 19.3 250 68-354 41-302 (391)
45 3ffr_A Phosphoserine aminotran 99.9 1.9E-23 6.4E-28 196.8 13.4 252 65-354 12-278 (362)
46 3e77_A Phosphoserine aminotran 99.9 8.2E-24 2.8E-28 201.3 10.4 256 62-355 18-286 (377)
47 1rv3_A Serine hydroxymethyltra 99.9 9.5E-23 3.2E-27 200.9 17.4 281 41-355 31-338 (483)
48 1j32_A Aspartate aminotransfer 99.9 4.1E-22 1.4E-26 190.0 21.1 213 54-292 29-253 (388)
49 1qz9_A Kynureninase; kynurenin 99.9 2.2E-22 7.5E-27 193.6 18.9 255 65-354 37-317 (416)
50 3qm2_A Phosphoserine aminotran 99.9 4.7E-24 1.6E-28 203.8 5.1 255 60-355 30-301 (386)
51 3ele_A Amino transferase; RER0 99.9 2.3E-21 7.9E-26 185.4 22.2 218 58-293 38-265 (398)
52 1gd9_A Aspartate aminotransfer 99.9 1.3E-21 4.5E-26 186.6 19.8 211 59-291 30-248 (389)
53 4dq6_A Putative pyridoxal phos 99.9 8.5E-22 2.9E-26 187.6 18.3 207 58-292 35-254 (391)
54 1xi9_A Putative transaminase; 99.9 1.9E-21 6.7E-26 186.8 20.9 212 54-290 37-259 (406)
55 2o0r_A RV0858C (N-succinyldiam 99.9 8.4E-22 2.9E-26 189.6 18.1 207 59-291 29-248 (411)
56 3h14_A Aminotransferase, class 99.9 3.7E-21 1.3E-25 183.7 22.5 224 40-292 17-246 (391)
57 1u08_A Hypothetical aminotrans 99.9 8.1E-22 2.8E-26 188.0 17.2 201 68-292 44-252 (386)
58 1o4s_A Aspartate aminotransfer 99.9 4.2E-21 1.4E-25 183.5 21.6 215 54-292 40-262 (389)
59 3g0t_A Putative aminotransfera 99.9 5E-21 1.7E-25 185.3 22.3 230 39-292 28-276 (437)
60 3l8a_A METC, putative aminotra 99.9 2E-21 6.7E-26 187.8 18.5 262 59-354 65-336 (421)
61 3ke3_A Putative serine-pyruvat 99.9 1.8E-21 6.3E-26 185.6 17.2 230 90-355 30-288 (379)
62 1svv_A Threonine aldolase; str 99.9 1.9E-21 6.4E-26 182.8 16.7 195 65-292 23-230 (359)
63 1v2d_A Glutamine aminotransfer 99.9 2.9E-21 9.9E-26 183.8 17.7 192 68-292 39-238 (381)
64 3b46_A Aminotransferase BNA3; 99.9 1.4E-21 4.8E-26 190.5 15.7 213 54-290 56-288 (447)
65 1yiz_A Kynurenine aminotransfe 99.9 4.7E-21 1.6E-25 185.3 19.0 201 68-292 51-271 (429)
66 1bw0_A TAT, protein (tyrosine 99.9 9.5E-21 3.2E-25 182.3 20.9 256 67-354 50-325 (416)
67 1b5p_A Protein (aspartate amin 99.9 2.2E-20 7.4E-25 178.3 23.2 210 56-291 32-249 (385)
68 2gb3_A Aspartate aminotransfer 99.9 2.9E-21 9.8E-26 185.9 17.1 207 59-292 47-260 (409)
69 2z61_A Probable aspartate amin 99.9 9.7E-21 3.3E-25 179.5 20.3 207 54-292 28-238 (370)
70 3ly1_A Putative histidinol-pho 99.9 8.4E-21 2.9E-25 178.6 19.7 200 58-291 19-228 (354)
71 3kax_A Aminotransferase, class 99.9 3.4E-21 1.2E-25 183.0 16.6 209 58-293 27-247 (383)
72 3dyd_A Tyrosine aminotransfera 99.9 8.9E-21 3E-25 183.7 19.8 261 57-354 56-336 (427)
73 2x5d_A Probable aminotransfera 99.9 1.7E-20 5.9E-25 180.5 21.5 218 53-291 35-260 (412)
74 3a2b_A Serine palmitoyltransfe 99.9 2.6E-21 8.8E-26 185.2 15.0 190 68-292 58-256 (398)
75 3frk_A QDTB; aminotransferase, 99.9 1.7E-21 5.7E-26 185.1 13.5 184 69-293 16-202 (373)
76 2fnu_A Aminotransferase; prote 99.9 3.2E-21 1.1E-25 182.6 15.4 188 65-292 8-196 (375)
77 1c7n_A Cystalysin; transferase 99.9 6.7E-21 2.3E-25 182.3 17.5 200 67-293 44-255 (399)
78 2a7v_A Serine hydroxymethyltra 99.9 5.4E-21 1.9E-25 187.8 16.9 276 41-355 41-348 (490)
79 2x3l_A ORN/Lys/Arg decarboxyla 99.9 5.4E-22 1.9E-26 193.5 9.4 218 96-354 58-280 (446)
80 3jtx_A Aminotransferase; NP_28 99.9 1.1E-20 3.8E-25 180.5 17.9 217 54-291 29-260 (396)
81 3fdb_A Beta C-S lyase, putativ 99.9 9.1E-21 3.1E-25 179.7 17.0 212 53-293 21-240 (377)
82 3cq5_A Histidinol-phosphate am 99.9 6.7E-20 2.3E-24 173.8 22.9 198 67-292 43-247 (369)
83 2dou_A Probable N-succinyldiam 99.9 1.4E-20 4.7E-25 178.8 18.1 216 53-291 23-245 (376)
84 3nra_A Aspartate aminotransfer 99.9 1.8E-20 6.1E-25 179.5 18.8 210 58-291 42-268 (407)
85 1v72_A Aldolase; PLP-dependent 99.9 2.8E-21 9.6E-26 181.6 12.6 198 60-291 12-225 (356)
86 1d2f_A MALY protein; aminotran 99.9 3.1E-20 1.1E-24 177.2 19.9 199 67-293 41-250 (390)
87 3m5u_A Phosphoserine aminotran 99.8 7.4E-22 2.5E-26 187.0 8.3 247 62-355 10-274 (361)
88 2c0r_A PSAT, phosphoserine ami 99.8 1.1E-20 3.6E-25 178.7 16.0 248 64-354 11-275 (362)
89 3ju7_A Putative PLP-dependent 99.8 1.8E-20 6.2E-25 178.8 17.3 188 68-293 14-206 (377)
90 3dr4_A Putative perosamine syn 99.8 6.3E-21 2.2E-25 182.2 13.9 185 70-293 36-221 (391)
91 1b9h_A AHBA synthase, protein 99.8 2.9E-20 1E-24 177.3 18.3 186 69-293 16-203 (388)
92 3get_A Histidinol-phosphate am 99.8 3.8E-20 1.3E-24 175.0 18.6 203 58-291 33-242 (365)
93 3tqx_A 2-amino-3-ketobutyrate 99.8 7.9E-21 2.7E-25 181.4 13.9 242 68-354 58-311 (399)
94 3ffh_A Histidinol-phosphate am 99.8 9.2E-20 3.1E-24 172.2 20.8 203 58-291 35-240 (363)
95 3uwc_A Nucleotide-sugar aminot 99.8 3.2E-21 1.1E-25 182.8 10.8 180 72-293 21-203 (374)
96 3nyt_A Aminotransferase WBPE; 99.8 7.6E-21 2.6E-25 180.3 13.1 185 69-293 15-201 (367)
97 2w8t_A SPT, serine palmitoyltr 99.8 6.4E-20 2.2E-24 177.6 19.5 238 68-353 79-327 (427)
98 2o1b_A Aminotransferase, class 99.8 2.9E-20 9.9E-25 178.7 16.8 212 58-291 50-268 (404)
99 2vyc_A Biodegradative arginine 99.8 2.8E-20 9.4E-25 191.9 17.4 221 98-355 208-458 (755)
100 3fvs_A Kynurenine--oxoglutarat 99.8 2.9E-20 9.8E-25 179.2 16.0 212 57-292 30-263 (422)
101 3e2y_A Kynurenine-oxoglutarate 99.8 4.2E-20 1.4E-24 177.2 16.9 211 58-292 26-256 (410)
102 2zc0_A Alanine glyoxylate tran 99.8 2E-19 6.8E-24 172.5 21.4 208 56-291 35-261 (407)
103 3n0l_A Serine hydroxymethyltra 99.8 4.5E-20 1.5E-24 177.3 16.7 246 67-354 36-294 (417)
104 1bs0_A Protein (8-amino-7-oxon 99.8 6.6E-20 2.3E-24 174.5 16.6 189 68-291 54-248 (384)
105 2dkj_A Serine hydroxymethyltra 99.8 2.8E-20 9.7E-25 178.1 14.0 272 40-354 9-293 (407)
106 3euc_A Histidinol-phosphate am 99.8 1.9E-19 6.5E-24 170.2 19.5 249 59-354 34-289 (367)
107 3ezs_A Aminotransferase ASPB; 99.8 2.8E-19 9.4E-24 169.6 19.7 212 56-291 24-246 (376)
108 2vi8_A Serine hydroxymethyltra 99.8 4.6E-20 1.6E-24 176.6 14.5 244 68-354 35-292 (405)
109 2po3_A 4-dehydrase; external a 99.8 3.7E-19 1.3E-23 172.0 20.6 191 60-293 21-215 (424)
110 1o69_A Aminotransferase; struc 99.8 1.4E-19 4.9E-24 173.3 17.1 185 70-294 12-200 (394)
111 2c81_A Glutamine-2-deoxy-scyll 99.8 1E-19 3.5E-24 175.5 16.2 191 69-293 15-207 (418)
112 3ftb_A Histidinol-phosphate am 99.8 2.9E-19 1E-23 168.3 18.9 188 68-293 40-232 (361)
113 3op7_A Aminotransferase class 99.8 1.4E-19 4.7E-24 171.7 16.5 184 75-290 47-236 (375)
114 1w23_A Phosphoserine aminotran 99.8 2.1E-20 7.2E-25 176.1 10.7 251 65-354 11-274 (360)
115 4f4e_A Aromatic-amino-acid ami 99.8 2.8E-19 9.7E-24 172.6 18.5 199 68-290 68-283 (420)
116 1fc4_A 2-amino-3-ketobutyrate 99.8 8.8E-20 3E-24 174.6 14.5 188 68-291 60-260 (401)
117 2rfv_A Methionine gamma-lyase; 99.8 1.9E-19 6.4E-24 172.7 16.7 159 94-292 63-227 (398)
118 2oga_A Transaminase; PLP-depen 99.8 2E-19 6.9E-24 172.5 16.9 183 70-293 44-229 (399)
119 3b8x_A WBDK, pyridoxamine 5-ph 99.8 4.3E-19 1.5E-23 169.4 19.0 193 67-292 12-204 (390)
120 1vp4_A Aminotransferase, putat 99.8 5.2E-19 1.8E-23 171.0 19.6 206 59-291 47-274 (425)
121 3p1t_A Putative histidinol-pho 99.8 9.9E-19 3.4E-23 163.1 20.3 184 67-291 29-213 (337)
122 1c4k_A Protein (ornithine deca 99.8 6.2E-20 2.1E-24 188.0 12.8 225 97-354 175-431 (730)
123 3aow_A Putative uncharacterize 99.8 1E-18 3.4E-23 170.5 20.7 207 58-292 79-304 (448)
124 3kki_A CAI-1 autoinducer synth 99.8 2.2E-19 7.5E-24 172.6 15.6 191 68-292 74-269 (409)
125 1gc0_A Methionine gamma-lyase; 99.8 1.8E-19 6.2E-24 172.9 14.7 158 95-292 65-228 (398)
126 3qhx_A Cystathionine gamma-syn 99.8 1.7E-19 5.8E-24 173.0 14.4 156 97-292 68-229 (392)
127 1lc5_A COBD, L-threonine-O-3-p 99.8 1.4E-18 4.7E-23 164.3 20.1 186 68-289 38-229 (364)
128 1e5e_A MGL, methionine gamma-l 99.8 1.6E-19 5.6E-24 173.7 13.3 156 97-292 64-226 (404)
129 3fsl_A Aromatic-amino-acid ami 99.8 3.4E-19 1.1E-23 170.2 14.8 204 68-291 45-262 (397)
130 3piu_A 1-aminocyclopropane-1-c 99.8 6.2E-19 2.1E-23 170.9 16.8 218 53-293 34-290 (435)
131 2cb1_A O-acetyl homoserine sul 99.8 1.7E-18 5.7E-23 167.0 19.1 159 96-294 57-220 (412)
132 3tcm_A Alanine aminotransferas 99.8 1.7E-18 5.7E-23 171.2 19.4 197 71-291 110-333 (500)
133 3qgu_A LL-diaminopimelate amin 99.8 5.3E-18 1.8E-22 164.9 22.6 220 40-292 53-298 (449)
134 1jg8_A L-ALLO-threonine aldola 99.8 2.2E-19 7.7E-24 168.3 12.0 185 65-284 13-210 (347)
135 2zyj_A Alpha-aminodipate amino 99.8 5.4E-19 1.8E-23 169.1 14.8 191 68-291 48-252 (397)
136 3ecd_A Serine hydroxymethyltra 99.8 1.1E-18 3.7E-23 168.0 16.8 247 67-354 43-302 (425)
137 1iay_A ACC synthase 2, 1-amino 99.8 1.3E-18 4.5E-23 168.1 17.4 181 91-293 83-285 (428)
138 3gbx_A Serine hydroxymethyltra 99.8 7E-19 2.4E-23 169.0 15.1 245 68-354 42-301 (420)
139 3ri6_A O-acetylhomoserine sulf 99.8 6.3E-19 2.2E-23 170.9 14.7 155 98-292 85-245 (430)
140 2fq6_A Cystathionine beta-lyas 99.8 1.7E-18 5.8E-23 167.2 17.3 155 98-292 85-247 (415)
141 1fg7_A Histidinol phosphate am 99.8 2.6E-18 8.9E-23 162.3 17.8 163 99-291 62-229 (356)
142 3hdo_A Histidinol-phosphate am 99.8 2.1E-18 7.2E-23 162.8 17.1 185 67-290 39-228 (360)
143 1ajs_A Aspartate aminotransfer 99.8 1.4E-18 4.8E-23 166.9 16.0 219 54-290 29-272 (412)
144 2aeu_A Hypothetical protein MJ 99.8 6.5E-18 2.2E-22 160.8 20.4 201 42-292 14-222 (374)
145 1mdo_A ARNB aminotransferase; 99.8 2.8E-18 9.6E-23 163.6 17.5 181 69-293 19-203 (393)
146 3rq1_A Aminotransferase class 99.8 1.4E-18 4.7E-23 167.4 15.4 212 56-290 39-276 (418)
147 2r2n_A Kynurenine/alpha-aminoa 99.8 1.3E-17 4.6E-22 161.1 22.0 182 87-292 74-278 (425)
148 3if2_A Aminotransferase; YP_26 99.8 4.1E-18 1.4E-22 165.4 18.1 212 56-291 32-290 (444)
149 3t18_A Aminotransferase class 99.8 5.6E-18 1.9E-22 162.8 18.9 198 68-290 56-275 (413)
150 3h7f_A Serine hydroxymethyltra 99.8 6.4E-18 2.2E-22 164.7 19.3 246 67-354 56-314 (447)
151 3acz_A Methionine gamma-lyase; 99.8 4.7E-18 1.6E-22 162.6 17.5 156 97-292 61-222 (389)
152 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.8 8.9E-18 3E-22 163.0 19.2 160 67-252 40-199 (437)
153 3i16_A Aluminum resistance pro 99.8 3.4E-18 1.2E-22 165.3 16.1 161 97-291 75-260 (427)
154 3jzl_A Putative cystathionine 99.8 3.4E-18 1.2E-22 164.6 15.5 161 97-291 61-243 (409)
155 1qgn_A Protein (cystathionine 99.8 9.7E-18 3.3E-22 163.1 18.7 156 96-292 115-278 (445)
156 2bwn_A 5-aminolevulinate synth 99.8 9.9E-18 3.4E-22 160.4 18.5 243 69-354 62-314 (401)
157 3ndn_A O-succinylhomoserine su 99.8 5.1E-18 1.7E-22 163.8 16.6 157 96-292 82-244 (414)
158 3n75_A LDC, lysine decarboxyla 99.8 2.3E-18 7.7E-23 175.3 14.6 217 98-354 198-435 (715)
159 1ax4_A Tryptophanase; tryptoph 99.8 8.2E-18 2.8E-22 164.3 17.7 195 70-293 55-281 (467)
160 1pff_A Methionine gamma-lyase; 99.8 2E-18 6.7E-23 161.1 12.7 154 99-292 2-162 (331)
161 3ei9_A LL-diaminopimelate amin 99.8 1.4E-17 4.7E-22 161.2 18.2 224 39-293 39-287 (432)
162 7aat_A Aspartate aminotransfer 99.8 1.6E-17 5.6E-22 158.9 18.5 203 70-291 49-265 (401)
163 3b1d_A Betac-S lyase; HET: PLP 99.6 3.7E-20 1.3E-24 177.0 0.0 204 68-295 45-257 (392)
164 3g7q_A Valine-pyruvate aminotr 99.8 8.2E-18 2.8E-22 161.6 16.1 229 42-291 17-264 (417)
165 2x5f_A Aspartate_tyrosine_phen 99.8 1.8E-18 6.2E-23 167.2 11.4 193 73-290 69-285 (430)
166 2fyf_A PSAT, phosphoserine ami 99.8 1.3E-18 4.6E-23 166.6 10.2 246 65-354 48-310 (398)
167 2ctz_A O-acetyl-L-homoserine s 99.8 2E-17 6.9E-22 159.9 18.0 155 97-291 60-221 (421)
168 3cog_A Cystathionine gamma-lya 99.8 4.9E-18 1.7E-22 163.4 13.5 154 99-293 71-231 (403)
169 1yaa_A Aspartate aminotransfer 99.8 8.8E-18 3E-22 161.4 14.8 200 67-289 47-267 (412)
170 3meb_A Aspartate aminotransfer 99.7 2.3E-17 7.9E-22 160.7 17.7 217 52-288 45-289 (448)
171 1ibj_A CBL, cystathionine beta 99.7 1E-17 3.5E-22 163.9 15.2 156 96-292 134-295 (464)
172 3hvy_A Cystathionine beta-lyas 99.7 1E-17 3.4E-22 162.0 14.9 159 97-291 76-260 (427)
173 3ihj_A Alanine aminotransferas 99.7 2.3E-17 8E-22 162.9 17.8 186 85-290 123-331 (498)
174 1vef_A Acetylornithine/acetyl- 99.7 3.4E-17 1.2E-21 156.4 18.2 198 68-293 62-270 (395)
175 3f6t_A Aspartate aminotransfer 99.7 8.5E-18 2.9E-22 167.4 14.4 213 60-293 108-330 (533)
176 1cs1_A CGS, protein (cystathio 99.7 3E-17 1E-21 156.6 17.5 156 97-292 54-215 (386)
177 2q7w_A Aspartate aminotransfer 99.7 2E-17 6.7E-22 157.8 15.8 202 67-290 44-260 (396)
178 3ez1_A Aminotransferase MOCR f 99.7 6.1E-18 2.1E-22 163.1 12.1 209 57-292 27-268 (423)
179 2ay1_A Aroat, aromatic amino a 99.7 6.4E-17 2.2E-21 154.3 18.8 201 67-290 44-257 (394)
180 2ez2_A Beta-tyrosinase, tyrosi 99.7 3.8E-17 1.3E-21 159.2 17.2 187 68-293 56-272 (456)
181 3ppl_A Aspartate aminotransfer 99.7 2.6E-17 8.9E-22 159.0 15.7 181 86-291 73-274 (427)
182 3ht4_A Aluminum resistance pro 99.7 2E-17 6.9E-22 160.4 14.8 164 96-291 66-249 (431)
183 1uu1_A Histidinol-phosphate am 99.7 4.9E-17 1.7E-21 152.0 16.6 180 67-291 32-217 (335)
184 2eh6_A Acoat, acetylornithine 99.7 5.5E-17 1.9E-21 153.6 16.7 198 68-292 45-256 (375)
185 3ruy_A Ornithine aminotransfer 99.7 1.4E-16 4.6E-21 152.0 19.5 197 68-292 53-267 (392)
186 3pj0_A LMO0305 protein; struct 99.7 3.1E-17 1E-21 154.4 14.6 184 69-290 28-220 (359)
187 2ord_A Acoat, acetylornithine 99.7 8.4E-17 2.9E-21 153.8 17.4 193 68-293 57-268 (397)
188 3k7y_A Aspartate aminotransfer 99.7 1.8E-16 6E-21 152.6 19.3 229 42-290 16-263 (405)
189 3lws_A Aromatic amino acid bet 99.7 2.9E-17 1E-21 154.6 13.3 162 99-291 51-219 (357)
190 3nmy_A Xometc, cystathionine g 99.7 3.3E-17 1.1E-21 157.5 12.3 154 98-292 70-231 (400)
191 3asa_A LL-diaminopimelate amin 99.7 4E-16 1.4E-20 149.4 19.1 217 39-292 16-252 (400)
192 1n8p_A Cystathionine gamma-lya 99.7 5.5E-17 1.9E-21 155.5 12.9 158 97-293 57-221 (393)
193 4adb_A Succinylornithine trans 99.7 6.3E-16 2.1E-20 147.9 18.6 193 69-292 57-267 (406)
194 3fkd_A L-threonine-O-3-phospha 99.7 6.7E-16 2.3E-20 144.9 17.3 192 56-290 16-211 (350)
195 2oqx_A Tryptophanase; lyase, p 99.7 5.4E-16 1.8E-20 151.3 16.9 199 70-292 53-280 (467)
196 4eu1_A Mitochondrial aspartate 99.7 2.5E-16 8.6E-21 151.2 14.0 234 41-293 27-277 (409)
197 3d6k_A Putative aminotransfera 99.7 8.9E-16 3E-20 148.2 16.4 212 57-291 34-272 (422)
198 1s0a_A Adenosylmethionine-8-am 99.7 5.3E-15 1.8E-19 142.9 21.5 202 68-292 60-290 (429)
199 3nx3_A Acoat, acetylornithine 99.7 7.9E-15 2.7E-19 140.0 21.0 194 68-292 53-263 (395)
200 2eo5_A 419AA long hypothetical 99.6 1.1E-14 3.9E-19 140.3 20.4 195 69-293 61-298 (419)
201 2pb2_A Acetylornithine/succiny 99.6 9.9E-15 3.4E-19 140.9 20.0 195 68-292 74-285 (420)
202 3i4j_A Aminotransferase, class 99.6 1.8E-14 6.1E-19 139.2 20.4 203 69-292 47-277 (430)
203 2zy4_A L-aspartate beta-decarb 99.6 3.3E-15 1.1E-19 149.1 15.5 215 59-293 108-332 (546)
204 1sff_A 4-aminobutyrate aminotr 99.6 3.4E-14 1.2E-18 136.7 20.0 198 68-292 58-283 (426)
205 3n5m_A Adenosylmethionine-8-am 99.6 1.1E-13 3.6E-18 134.8 22.4 199 69-292 67-300 (452)
206 1z7d_A Ornithine aminotransfer 99.6 6.7E-14 2.3E-18 135.6 20.8 197 68-292 82-297 (433)
207 3a8u_X Omega-amino acid--pyruv 99.6 7.3E-14 2.5E-18 135.7 21.0 201 69-292 68-304 (449)
208 3dxv_A Alpha-amino-epsilon-cap 99.6 2E-14 7E-19 139.2 16.4 198 68-292 60-285 (439)
209 3ou5_A Serine hydroxymethyltra 99.6 5.7E-14 1.9E-18 133.7 18.0 197 67-293 65-281 (490)
210 3l44_A Glutamate-1-semialdehyd 99.6 5.9E-14 2E-18 135.7 17.8 193 68-292 72-285 (434)
211 2oat_A Ornithine aminotransfer 99.6 1.3E-13 4.3E-18 133.9 20.1 197 68-292 93-308 (439)
212 4h51_A Aspartate aminotransfer 99.6 4.5E-14 1.5E-18 136.2 16.2 232 41-293 31-282 (420)
213 3fq8_A Glutamate-1-semialdehyd 99.6 2E-13 6.8E-18 131.7 20.3 187 68-292 69-282 (427)
214 3dod_A Adenosylmethionine-8-am 99.6 5.2E-13 1.8E-17 129.8 22.9 203 68-292 61-296 (448)
215 3gju_A Putative aminotransfera 99.6 1.9E-13 6.6E-18 133.4 19.7 204 69-292 69-306 (460)
216 3k28_A Glutamate-1-semialdehyd 99.5 1.7E-13 5.9E-18 132.4 18.9 193 68-292 70-283 (429)
217 4a6r_A Omega transaminase; tra 99.5 1.8E-13 6.2E-18 133.5 19.0 203 69-292 68-304 (459)
218 1zod_A DGD, 2,2-dialkylglycine 99.5 2.1E-13 7.2E-18 131.7 19.1 196 69-292 61-287 (433)
219 3hmu_A Aminotransferase, class 99.5 2.9E-13 1E-17 132.6 20.3 204 68-292 72-308 (472)
220 2cjg_A L-lysine-epsilon aminot 99.5 6.3E-13 2.1E-17 129.4 20.9 204 68-292 71-311 (449)
221 3tfu_A Adenosylmethionine-8-am 99.5 2.1E-13 7.3E-18 133.1 17.3 204 68-292 92-319 (457)
222 3i5t_A Aminotransferase; pyrid 99.5 4.7E-13 1.6E-17 131.3 18.9 204 68-292 71-307 (476)
223 2epj_A Glutamate-1-semialdehyd 99.5 2.5E-13 8.6E-18 131.3 16.6 187 68-292 73-286 (434)
224 2cy8_A D-phgat, D-phenylglycin 99.5 7.3E-13 2.5E-17 128.9 19.4 187 68-292 74-284 (453)
225 4ffc_A 4-aminobutyrate aminotr 99.5 9.4E-13 3.2E-17 128.3 19.7 198 69-292 82-309 (453)
226 4e77_A Glutamate-1-semialdehyd 99.5 3.6E-12 1.2E-16 123.0 21.9 193 68-292 70-283 (429)
227 3oks_A 4-aminobutyrate transam 99.5 3.6E-12 1.2E-16 124.0 21.6 197 69-292 79-311 (451)
228 3bwn_A AT1G70560, L-tryptophan 99.4 4.5E-13 1.5E-17 128.1 12.5 194 58-292 25-233 (391)
229 2e7u_A Glutamate-1-semialdehyd 99.4 8.3E-12 2.8E-16 120.2 18.1 186 68-292 69-281 (424)
230 1ohv_A 4-aminobutyrate aminotr 99.3 3E-11 1E-15 118.3 16.6 171 68-250 80-304 (472)
231 2hox_A ALLIIN lyase 1; cystein 99.3 3E-12 1E-16 123.9 8.6 192 59-293 60-268 (427)
232 2yky_A Beta-transaminase; tran 98.8 3.3E-12 1.1E-16 124.6 0.0 187 68-292 117-315 (465)
233 4ao9_A Beta-phenylalanine amin 99.0 1.3E-08 4.5E-13 98.7 19.4 189 67-292 103-302 (454)
234 4e3q_A Pyruvate transaminase; 98.8 4.7E-07 1.6E-11 88.3 20.1 206 67-292 83-321 (473)
235 4atq_A 4-aminobutyrate transam 98.7 2.4E-06 8.3E-11 82.9 23.0 200 67-293 80-311 (456)
236 4a0g_A Adenosylmethionine-8-am 98.3 2.3E-05 7.7E-10 81.6 19.5 205 69-292 399-680 (831)
237 3vc3_A Beta-cyanoalnine syntha 54.2 23 0.00077 32.3 6.4 53 120-184 90-142 (344)
238 4fgs_A Probable dehydrogenase 50.1 73 0.0025 27.8 8.8 84 120-219 31-120 (273)
239 1vp8_A Hypothetical protein AF 45.9 1.3E+02 0.0044 25.0 9.9 104 120-231 18-136 (201)
240 3rpc_A Possible metal-dependen 43.9 1.5E+02 0.0051 25.2 10.8 77 155-231 161-247 (264)
241 3l6u_A ABC-type sugar transpor 43.9 98 0.0034 26.3 8.7 76 156-243 12-94 (293)
242 3dwg_A Cysteine synthase B; su 41.1 1.3E+02 0.0043 26.8 9.2 53 120-184 76-128 (325)
243 3kts_A Glycerol uptake operon 40.0 15 0.0005 30.6 2.4 49 191-248 18-66 (192)
244 4h27_A L-serine dehydratase/L- 37.9 1.7E+02 0.0057 26.6 9.6 51 120-182 96-146 (364)
245 2rkb_A Serine dehydratase-like 36.0 1.1E+02 0.0036 27.2 7.7 51 120-182 57-107 (318)
246 3m9w_A D-xylose-binding peripl 35.9 1.2E+02 0.0042 26.1 8.1 58 168-231 25-82 (313)
247 3uug_A Multiple sugar-binding 35.5 1.3E+02 0.0044 26.1 8.3 64 167-242 25-88 (330)
248 4aec_A Cysteine synthase, mito 34.5 93 0.0032 29.2 7.3 53 120-184 178-230 (430)
249 3grp_A 3-oxoacyl-(acyl carrier 34.4 2.1E+02 0.0073 24.2 9.8 83 120-218 29-117 (266)
250 3ff4_A Uncharacterized protein 34.3 43 0.0015 25.4 4.1 43 192-248 72-114 (122)
251 3tbh_A O-acetyl serine sulfhyd 33.7 93 0.0032 27.9 7.0 52 121-184 76-127 (334)
252 4gqr_A Pancreatic alpha-amylas 32.5 20 0.00069 33.8 2.4 33 211-249 69-101 (496)
253 3m0z_A Putative aldolase; MCSG 32.0 1.4E+02 0.005 25.3 7.2 71 164-249 144-223 (249)
254 1p5j_A L-serine dehydratase; l 31.1 1.6E+02 0.0053 26.9 8.2 51 120-182 96-146 (372)
255 2yxb_A Coenzyme B12-dependent 30.9 1.1E+02 0.0037 24.3 6.2 83 154-246 18-108 (161)
256 2q3b_A Cysteine synthase A; py 30.7 1E+02 0.0036 27.1 6.8 53 120-184 70-122 (313)
257 3l49_A ABC sugar (ribose) tran 29.4 1.5E+02 0.0052 25.0 7.5 38 171-209 31-68 (291)
258 1y80_A Predicted cobalamin bin 28.4 1.7E+02 0.0058 24.0 7.3 71 167-246 108-179 (210)
259 3g1w_A Sugar ABC transporter; 27.7 2.4E+02 0.0083 23.9 8.6 59 168-231 27-85 (305)
260 1y7l_A O-acetylserine sulfhydr 25.8 69 0.0024 28.4 4.6 53 120-184 65-117 (316)
261 1g94_A Alpha-amylase; beta-alp 25.7 29 0.001 32.6 2.2 33 211-249 57-89 (448)
262 3rjz_A N-type ATP pyrophosphat 25.7 2.8E+02 0.0095 23.6 8.2 91 119-231 7-115 (237)
263 8abp_A L-arabinose-binding pro 25.5 2.3E+02 0.008 23.9 8.1 64 168-244 25-89 (306)
264 2o1e_A YCDH; alpha-beta protei 25.5 3.5E+02 0.012 23.8 9.6 71 155-241 191-265 (312)
265 1v71_A Serine racemase, hypoth 25.0 81 0.0028 28.0 4.9 53 120-184 77-129 (323)
266 2pqm_A Cysteine synthase; OASS 25.0 82 0.0028 28.4 5.0 53 120-184 81-133 (343)
267 1z7w_A Cysteine synthase; tran 25.0 1.8E+02 0.0063 25.6 7.4 53 120-184 70-122 (322)
268 1tks_A 3,4-dihydroxy-2-butanon 24.9 1.4E+02 0.0046 25.0 5.8 36 202-243 159-194 (204)
269 3jy6_A Transcriptional regulat 24.8 2.6E+02 0.0088 23.3 8.1 18 193-210 76-93 (276)
270 4es6_A Uroporphyrinogen-III sy 24.8 40 0.0014 28.8 2.7 61 154-214 6-70 (254)
271 3rot_A ABC sugar transporter, 24.3 1.9E+02 0.0066 24.6 7.3 66 167-243 25-91 (297)
272 2ioy_A Periplasmic sugar-bindi 24.1 3.1E+02 0.011 23.0 8.5 39 169-208 25-63 (283)
273 3gi1_A LBP, laminin-binding pr 24.0 3.5E+02 0.012 23.4 11.6 72 155-242 180-255 (286)
274 2v03_A Cysteine synthase B; py 23.6 2.2E+02 0.0074 24.9 7.5 52 120-183 64-115 (303)
275 4dqx_A Probable oxidoreductase 23.4 3.4E+02 0.012 23.0 11.5 83 120-218 29-117 (277)
276 3tb6_A Arabinose metabolism tr 23.3 3.3E+02 0.011 22.8 8.8 13 171-183 41-53 (298)
277 4d9i_A Diaminopropionate ammon 23.1 4.2E+02 0.014 24.1 9.6 52 120-183 115-166 (398)
278 3bh4_A Alpha-amylase; calcium, 22.9 40 0.0014 32.0 2.5 33 211-249 71-103 (483)
279 1ud2_A Amylase, alpha-amylase; 22.6 41 0.0014 31.8 2.6 33 211-249 73-105 (480)
280 3mfq_A TROA, high-affinity zin 22.3 81 0.0028 27.6 4.3 70 163-243 169-243 (282)
281 1wpc_A Glucan 1,4-alpha-maltoh 22.2 43 0.0015 31.8 2.6 33 211-249 75-107 (485)
282 1mxg_A Alpha amylase; hyperthe 22.0 44 0.0015 31.3 2.6 33 211-249 79-111 (435)
283 1iuk_A Hypothetical protein TT 21.9 65 0.0022 24.8 3.2 42 195-249 87-128 (140)
284 1hvx_A Alpha-amylase; hydrolas 21.8 44 0.0015 32.1 2.6 33 211-249 74-106 (515)
285 3ss7_X D-serine dehydratase; t 21.8 2.4E+02 0.0081 26.4 7.7 53 119-183 162-214 (442)
286 3ksm_A ABC-type sugar transpor 21.7 2.6E+02 0.009 23.1 7.5 15 194-208 50-65 (276)
287 1gcy_A Glucan 1,4-alpha-maltot 21.5 41 0.0014 32.4 2.3 31 213-249 87-117 (527)
288 1lwj_A 4-alpha-glucanotransfer 21.2 44 0.0015 31.2 2.4 32 211-248 62-93 (441)
289 3kbq_A Protein TA0487; structu 21.2 3.2E+02 0.011 21.9 7.5 53 166-223 27-82 (172)
290 3m6y_A 4-hydroxy-2-oxoglutarat 21.1 1.9E+02 0.0064 25.0 5.9 70 165-249 168-246 (275)
291 3l6b_A Serine racemase; pyrido 20.8 1.6E+02 0.0054 26.5 6.0 52 120-183 79-130 (346)
292 2ioj_A Hypothetical protein AF 20.8 1.4E+02 0.0049 22.6 5.0 35 197-243 68-103 (139)
293 2pjk_A 178AA long hypothetical 20.8 3.3E+02 0.011 21.8 7.6 54 165-223 43-101 (178)
294 1j0a_A 1-aminocyclopropane-1-c 20.4 1.5E+02 0.0051 26.3 5.7 30 155-184 98-128 (325)
295 4aie_A Glucan 1,6-alpha-glucos 20.4 47 0.0016 31.8 2.4 32 211-248 72-103 (549)
296 3gvc_A Oxidoreductase, probabl 20.3 4E+02 0.014 22.6 11.2 83 120-218 31-119 (277)
297 2guy_A Alpha-amylase A; (beta- 20.3 41 0.0014 31.8 2.0 33 210-248 89-121 (478)
298 2prs_A High-affinity zinc upta 20.2 4.2E+02 0.014 22.8 8.6 71 155-242 175-250 (284)
299 3dhu_A Alpha-amylase; structur 20.1 44 0.0015 31.3 2.2 30 212-247 77-106 (449)
300 3kl7_A Putative metal-dependen 20.1 1.6E+02 0.0054 24.6 5.6 53 173-231 172-225 (235)
No 1
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=100.00 E-value=4.9e-50 Score=397.68 Aligned_cols=355 Identities=81% Similarity=1.314 Sum_probs=308.1
Q ss_pred CCCCCCCCCccccccccccchhhhhcCCCCCCCCCCCCHHHHHHHHHHHhhhcCCCCcccccccCCCChHHHHHHHHHHh
Q 018437 1 MVISTTETDSREILSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASI 80 (356)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~i~~~~ 80 (356)
||++.+.++....+.+.|+++|+...+|+..+|+.+.+..++++.+++.+.+++||.+|+.+|+++++++.+.+++.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~p~~~~~~~~~~~~~~~~i~l~gnp~~~l~s~~t~~~~~~v~~~l~~~~ 80 (502)
T 3hbx_A 1 MVLSHAVSESDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMSSI 80 (502)
T ss_dssp -----------CCCSCTTTSSGGGSCCCSSSCCSSCCCHHHHHHHHHHHGGGSCCGGGBTTCCSCCCCCHHHHHHHHHTT
T ss_pred CCcccccCCCcccccccccchhhhhhccCCCCCCCCCCHHHHHHHHHHHhccCCCCCceeccccCCCCCHHHHHHHHHHh
Confidence 78999899999999999999999999999999999999999999999999999999999999998888899999999999
Q ss_pred cccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEec
Q 018437 81 NKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTG 160 (356)
Q Consensus 81 ~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s 160 (356)
+.+..++..+|...++|+++++++++++|++.+......+++|+|||+||++++++++.++..+++..|....+++||++
T Consensus 81 ~~~~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~ 160 (502)
T 3hbx_A 81 NKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTG 160 (502)
T ss_dssp TCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEE
T ss_pred ccCCCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEc
Confidence 98888888899999999999999999999983222335578899999999999999998887766666755556699999
Q ss_pred CCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCc
Q 018437 161 ANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTP 240 (356)
Q Consensus 161 ~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~ 240 (356)
.++|+++.++++.+|++++.||++++++.+|+++|+++++++|++|++++|+|++|.++|+++|.++|++++++++.++|
T Consensus 161 ~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~ 240 (502)
T 3hbx_A 161 ANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTP 240 (502)
T ss_dssp TTCCHHHHHHHHHTTCEEEEECCBTTBCSCCHHHHHHHCCTTEEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCC
T ss_pred CCchHHHHHHHHHcCceeEEEecCCCcCcCCHHHHHHHHhhCCEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCe
Confidence 99999999999999999999999875599999999999999999999999999999999999999999999777777999
Q ss_pred EEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCCC
Q 018437 241 IHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSK 320 (356)
Q Consensus 241 l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr 320 (356)
+|||+||++++.||+.+..++++...++|++++++|||+++|.|+|+++++++..+...+.....|+++....+++.+||
T Consensus 241 l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr 320 (502)
T 3hbx_A 241 IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSK 320 (502)
T ss_dssp EEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSC
T ss_pred EEEECCccchhhhhhCcccccccCCCCceEEEECcccccCCCCCeEEEEEeCHHHhhHHhccCcccccCCCCCccccCCc
Confidence 99999999988887777777777778999999999999999999999999887666555555678888766566778999
Q ss_pred ChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 321 GSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 321 ~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
++..++++|+++..+|.+|++++++++.+++++|+
T Consensus 321 ~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~ 355 (502)
T 3hbx_A 321 GSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLR 355 (502)
T ss_dssp BSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98889999999999999999999999999998874
No 2
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=100.00 E-value=2.1e-46 Score=366.90 Aligned_cols=340 Identities=49% Similarity=0.887 Sum_probs=271.8
Q ss_pred cccccchhhhhcCCCCCCCCCCCCHHHHHHHHHHHhhhcCCCCcccccccCCCChHHHHHHHHHHhcccCCCcccCcchH
Q 018437 15 SSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTT 94 (356)
Q Consensus 15 ~~~~~~~~~~~~~~~~~lp~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~ 94 (356)
++.|++......+++.++|+.|++.+++++.+.+....++.+..++..|.++++++.+.+++.++++.+..+|..+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~lp~~g~~~~~v~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~e~~~~a~~~~~~~~~~~~~~~ 80 (452)
T 2dgk_A 1 DSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSA 80 (452)
T ss_dssp --------------CCSCCCSCCCHHHHHHHHHHHGGGSCCCTTBCSCCSCCCCCHHHHHHHHHTTTCBTTCTTTCHHHH
T ss_pred CCcccchHHhhhccCCCCCCCCCCHHHHHHHHHHHhcCCCCCccCCCCeeCCCchHHHHHHHHHHhccCCCChhhChhHH
Confidence 35788888888888889999999999999999998866666555666666667778899999999998888888899999
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhh
Q 018437 95 ELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYF 174 (356)
Q Consensus 95 ~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~ 174 (356)
++|+++++++++++|++.++.....+++|+|||+||+++++++++.+..+++.+|...++++||++. +|+++.++++.+
T Consensus 81 ~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~ 159 (452)
T 2dgk_A 81 AIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYW 159 (452)
T ss_dssp HHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHHc
Confidence 9999999999999999852100124899999999999999999876554444444332346899999 999999999999
Q ss_pred CCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccc
Q 018437 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (356)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (356)
|++++.||++++++.+|+++|+++|+++|++|++++|+|+||.++|+++|+++|++++++++.++|+|||+||++++.||
T Consensus 160 G~~v~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~ 239 (452)
T 2dgk_A 160 DVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPF 239 (452)
T ss_dssp TCEEEECCCBTTBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHH
T ss_pred CceEEEEecCCCCCeECHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHh
Confidence 99999999986459999999999999999999999999999999999999999999654444499999999999988776
Q ss_pred cCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHH
Q 018437 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIR 334 (356)
Q Consensus 255 ~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~ 334 (356)
+.+..++++...++|++++++|||+++|+++|+++++++..+...+...+.|+++...+++++++|++..++++|++++.
T Consensus 240 ~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~ 319 (452)
T 2dgk_A 240 VAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLR 319 (452)
T ss_dssp HCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHH
T ss_pred hCccchhhcCCCCCcEEEECcccccCCCCCeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHH
Confidence 55544556666799999999999999999999999987654434444456777664334557789998779999999999
Q ss_pred hCHHHHHHHHHHHHhccCccc
Q 018437 335 LGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 335 lg~~G~~~~~~~~~~~a~~l~ 355 (356)
+|.+|++++++++.+++++|.
T Consensus 320 lg~~g~~~~~~~~~~~a~~l~ 340 (452)
T 2dgk_A 320 LGREGYTKVQNASYQVAAYLA 340 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998874
No 3
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.7e-43 Score=345.29 Aligned_cols=329 Identities=16% Similarity=0.218 Sum_probs=263.6
Q ss_pred ccccccchhhhhcCCCCCCCCCCCCHHHHHHHHHHHhhh----cCCCCcccccccCCC--ChHHHHHHHHHHhcccCCCc
Q 018437 14 LSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELML----DGNPRLNLASFVTTW--MEPECDKLVMASINKNYVDM 87 (356)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~i~~~~~~~~~~----~~~~~~~l~~~~~~~--~~~~v~~~i~~~~~~~~~~~ 87 (356)
+.+...+.+++..++. .+|+.|.+.+++++++.+.+.. +.||+| .+|.+++ ++..+.+++..++|.|...|
T Consensus 34 v~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 110 (481)
T 4e1o_A 34 VTPDVQPGYLRAQLPE-SAPEDPDSWDSIFGDIERIIMPGVVHWQSPHM--HAYYPALTSWPSLLGDMLADAINCLGFTW 110 (481)
T ss_dssp SSCCCCTTTTGGGSCS-SCCSSCCCHHHHHHHHHHHTGGGCCCTTSTTB--CSSSCCCCCHHHHHHHHHHHHHCCCCSST
T ss_pred CCCCCCHHHHHHhcCC-CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCe--eEeCCCCCCHHHHHHHHHHHHhCcccCCc
Confidence 4444556667777775 7899999999999999998652 568876 4555443 34577889999999998899
Q ss_pred ccCcchHHHHHHHHHHHHHHhCCCCCC-----CCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCC------CCCe
Q 018437 88 DEYPVTTELQNRCVNMIAHLFNTPVAD-----DKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPY------DKPN 156 (356)
Q Consensus 88 ~~~~~~~~le~~~~~~la~l~g~~~~~-----~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~------~~~~ 156 (356)
..+|...++|+++.+|+++++|++... .....+++|+|||+||+++++++++++..+.+..|... .+.+
T Consensus 111 ~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~ 190 (481)
T 4e1o_A 111 ASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLV 190 (481)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEE
T ss_pred CCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeE
Confidence 999999999999999999999998521 00125899999999999999999987655443333221 2458
Q ss_pred EEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhC------ceEEEEecCCCcccccCCHHHHHHHHHH
Q 018437 157 IVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN------TICVAAILGSTLTGEFEDVKLLHDLLTK 230 (356)
Q Consensus 157 vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~------~~~v~~~~~~~~tG~~~~i~~I~~i~~~ 230 (356)
|+++..+|+++.+++.+.|++++.||+++ +++||+++|+++|+++ +++|++++++|++|.++|+++|+++|++
T Consensus 191 v~~s~~~H~s~~~~~~~~g~~~~~v~~~~-~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~ 269 (481)
T 4e1o_A 191 AYASDQAHSSVEKAGLISLVKMKFLPVDD-NFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAR 269 (481)
T ss_dssp EEEETTSCHHHHHHHHHHTCEEEEECCCT-TSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHH
T ss_pred EEEcCcchHHHHHHHHhCCCceEEEEcCC-CCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHH
Confidence 99999999999999999999999999986 4999999999999764 7889999999999999999999999999
Q ss_pred hhhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCC
Q 018437 231 KNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGS 309 (356)
Q Consensus 231 ~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~ 309 (356)
| |+|+|||+||+++.. ..++.+.... +..+|++++++|||+++|+|||+++++++..+...+.....|+..
T Consensus 270 ~------~~~lhvDaA~g~~~~--~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~ 341 (481)
T 4e1o_A 270 E------GLWLHIDAAYAGTAF--LCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRH 341 (481)
T ss_dssp H------TCEEEEECTTGGGGG--GSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESBHHHHHTTTCCCCGGGCC
T ss_pred c------CCeEEeehhhHHHHH--hChhhHHHhcCcccCCEEEEChHHhcCCCCceEEEEEeCHHHHHHHhcCCchhccC
Confidence 9 999999999998754 3332222222 345699999999999999999999999865543343344556544
Q ss_pred CC-------CCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 310 DQ-------PTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 310 ~~-------~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
.. ..++++++|+.. ++++|++++.+|.+|++++++++.+++++|+
T Consensus 342 ~~~~~~~~~~~~~~~~~r~~~-~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~ 393 (481)
T 4e1o_A 342 ANSGVATDFMHWQIPLSRRFR-SVKLWFVIRSFGVKNLQAHVRHGTEMAKYFE 393 (481)
T ss_dssp TTTTTSCCGGGGSSSSCCCCT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCcccccccCCCCcc-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 21 234577888865 8999999999999999999999999998874
No 4
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=100.00 E-value=8.6e-43 Score=343.42 Aligned_cols=328 Identities=17% Similarity=0.183 Sum_probs=253.0
Q ss_pred ccccccchhhhhcCCCCCCCCCCCCHHHHHHHHHHHhhh----cCCCCcccccccCCCC--hHHHHHHHHHHhcccCCCc
Q 018437 14 LSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELML----DGNPRLNLASFVTTWM--EPECDKLVMASINKNYVDM 87 (356)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~i~~~~~~~~~~----~~~~~~~l~~~~~~~~--~~~v~~~i~~~~~~~~~~~ 87 (356)
+.+...+.+++..++. ++|+.|.+.+++++++.+.+.. +.||+| .++.+++. +..+.+++...+|.|...|
T Consensus 29 v~~~~~p~~l~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~l~~~~n~~~~~~ 105 (475)
T 3k40_A 29 VLPEVKPGYLKPLIPD-AAPEKPEKWQDVMQDIERVIMPGVTHWHSPKF--HAYFPTANSYPAIVADMLSGAIACIGFTW 105 (475)
T ss_dssp SSCSSCTTCSGGGSCS-SCCSSCCCHHHHHHHHHHHTGGGCCCTTCTTB--CCSSCCCCCHHHHHHHHHHHHHCCCSSSC
T ss_pred CCCCCCHHHHHHhcCC-CCCCCCCCHHHHHHHHHHHHhccCCCCCCcCc--eeeCCCCCcHHHHHHHHHHHHhCccccCc
Confidence 4444455666777775 8999999999999999987652 568887 35554443 3477889999999998899
Q ss_pred ccCcchHHHHHHHHHHHHHHhCCCCCC----CCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCC------CCCeE
Q 018437 88 DEYPVTTELQNRCVNMIAHLFNTPVAD----DKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPY------DKPNI 157 (356)
Q Consensus 88 ~~~~~~~~le~~~~~~la~l~g~~~~~----~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~------~~~~v 157 (356)
..+|...++|+++.+|+++++|++.+. .....+++|+|||+||+++++++++++..+.+..|... .+.+|
T Consensus 106 ~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v 185 (475)
T 3k40_A 106 IASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVG 185 (475)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEE
T ss_pred cCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEE
Confidence 999999999999999999999998521 01125899999999999999999887654333222211 12479
Q ss_pred EecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhC------ceEEEEecCCCcccccCCHHHHHHHHHHh
Q 018437 158 VTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN------TICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (356)
Q Consensus 158 i~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~------~~~v~~~~~~~~tG~~~~i~~I~~i~~~~ 231 (356)
+++..+|+++.++++..|++++.||++++ + ||+++|+++|+++ |++|++++++|++|.++|+++|+++|++|
T Consensus 186 i~s~~~H~s~~~~~~~~g~~~~~v~~d~~-~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~ 263 (475)
T 3k40_A 186 YCSDQAHSSVERAGLLGGVKLRSVQSENH-R-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKH 263 (475)
T ss_dssp EEETTSCHHHHHHHHHHTCEEEEECCBTT-B-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHT
T ss_pred EECCCchHHHHHHHHHcCCceEEEECCCC-C-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHh
Confidence 99999999999999999999999999875 8 9999999999864 67899999999999999999999999999
Q ss_pred hhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCC
Q 018437 232 NEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSD 310 (356)
Q Consensus 232 ~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~ 310 (356)
|+|+|||+||+++.. ..++.+..+. +..+|++++++|||+++|+|||+++++++..+.+.+...+.|+...
T Consensus 264 ------~~~lhvD~A~~~~~~--~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~ 335 (475)
T 3k40_A 264 ------NLWIHVDAAYAGSAF--ICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLKHD 335 (475)
T ss_dssp ------TCEEEEECTTGGGGG--GSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSGGGC--------------
T ss_pred ------CCeEEEeHHhHHHHH--hCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCHHHHHHHhcCCccccCCC
Confidence 999999999998654 2332222222 3467999999999999999999999998766544444445566432
Q ss_pred C-------CCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 311 Q-------PTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 311 ~-------~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
. ..++++++|++. ++++|++++.+|.+|++++++++.+++++|+
T Consensus 336 ~~~~~~~~~~~~~~~sr~~~-~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~ 386 (475)
T 3k40_A 336 MQGSAPDYRHWQIPLGRRFR-ALKLWFVLRLYGVENLQAHIRRHCNFAKQFG 386 (475)
T ss_dssp -------------CCCGGGT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCcccccccCCCccc-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 1 235677898865 8999999999999999999999999998874
No 5
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=100.00 E-value=1.8e-41 Score=336.79 Aligned_cols=323 Identities=17% Similarity=0.191 Sum_probs=261.0
Q ss_pred cccchhhhhc---CCCCCCCCCCCCHHHHHHHHHHHhhh---cCCCCcccccccCCCCh--HHHHHHHHHHhcccCCCcc
Q 018437 17 TFASRYVRAA---IPRFKMPDNSMPKEAAYQVINDELML---DGNPRLNLASFVTTWME--PECDKLVMASINKNYVDMD 88 (356)
Q Consensus 17 ~~~~~~~~~~---~~~~~lp~~~~~~~~i~~~~~~~~~~---~~~~~~~l~~~~~~~~~--~~v~~~i~~~~~~~~~~~~ 88 (356)
...+.+++.. ++ .++|+.|.+.+++++++++++.. +.||+| .+|.+++.. ..+.+++.++++.+...|.
T Consensus 52 ~~~p~~l~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~f--~~~~~~~~~~~~~~~e~l~~~~~~~~~~~~ 128 (511)
T 3vp6_A 52 FHHPHQLLEGMEGFN-LELSDHPESLEQILVDCRDTLKYGVRTGHPRF--FNQLSTGLDIIGLAGEWLTSTANTNMFTYE 128 (511)
T ss_dssp CCCHHHHHHCBTTBC-CCCCSSCCCHHHHHHHHHHHHHTSCCTTSTTE--ESSSSCCCCHHHHHHHHHHHHHCCCSSCTT
T ss_pred CCCHHHHHHHHhhCC-CCCCCCCCCHHHHHHHHHHHhhccCCCCCCCc--eEeecCCCcHHHHHHHHHHHHhccCCCCcc
Confidence 3345555555 33 47899999999999999887753 467876 456665543 3667889999999888899
Q ss_pred cCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCC-CCCCeEEecCCCcchH
Q 018437 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKP-YDKPNIVTGANVQVCW 167 (356)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~-~~~~~vi~s~~~h~s~ 167 (356)
.++...++|+++++|+++++|++.+ ..++++|+|||+||+.++.++++.+....+.+|.. ..+.+|++|..+|+++
T Consensus 129 ~~p~~~~le~~~~~~l~~~~g~~~~---~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~ 205 (511)
T 3vp6_A 129 IAPVFVLMEQITLKKMREIVGWSSK---DGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSI 205 (511)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCCSS---SCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHH
T ss_pred cCchHHHHHHHHHHHHHHHhCCCCC---CCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHH
Confidence 9999999999999999999999852 14689999999999999999987542211222321 1245899999999999
Q ss_pred HHHHHhhCC---eeEEEEecCCccccCHHHHHHHHhhC------ceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCC
Q 018437 168 EKFARYFEV---ELKEVKLEEGYYVMNPVKAVELVDEN------TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWD 238 (356)
Q Consensus 168 ~~~~~~~G~---~v~~v~~~~~~~~~d~~~L~~~i~~~------~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~ 238 (356)
.++++.+|+ +++.||++++ ++||+++|+++|+++ |++|++++++|++|.++|+++|+++|++| |
T Consensus 206 ~~~~~~~g~g~~~~~~v~~d~~-~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~------~ 278 (511)
T 3vp6_A 206 KKAGAALGFGTDNVILIKCNER-GKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKY------N 278 (511)
T ss_dssp HHHHHHTTSCGGGEEEECBCTT-SCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHH------T
T ss_pred HHHHHHcCCCCCcEEEeecCCC-CccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHc------C
Confidence 999999998 8999999874 999999999999865 88999999999999999999999999999 9
Q ss_pred CcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCC------
Q 018437 239 TPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQ------ 311 (356)
Q Consensus 239 ~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~------ 311 (356)
+|+|||+||+++.+ ..++.+..+. ..++|++++++|||+++|.|||+++++++..+...+...+.|+....
T Consensus 279 ~~lhvD~a~~~~~~--~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~ 356 (511)
T 3vp6_A 279 LWLHVDAAWGGGLL--MSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVS 356 (511)
T ss_dssp CEEEEEETTGGGGG--GCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGG
T ss_pred CEEEEEccchhhHh--hChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCHHHHHHHhccCCccccCcccccccc
Confidence 99999999998776 4454444443 45789999999999999999999999987655433334456664321
Q ss_pred ---CCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 312 ---PTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 312 ---~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
...+++++|++. ++++|++|+.+|.+|++++++++.++++||+
T Consensus 357 ~~~~~~~~~~~r~~~-al~~~~al~~~g~~gl~~~~~~~~~~a~~l~ 402 (511)
T 3vp6_A 357 YDTGDKAIQCGRHVD-IFKFWLMWKAKGTVGFENQINKCLELAEYLY 402 (511)
T ss_dssp GCCGGGSSCSSCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCccCCCCCCCCchH-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 134577888875 8999999999999999999999999999874
No 6
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=100.00 E-value=2e-40 Score=327.37 Aligned_cols=325 Identities=18% Similarity=0.226 Sum_probs=248.0
Q ss_pred ccchhhhhcCCCCCCCCCCCCHHHHHHHHHHHhhh----cCCCCcccccccCCCC-h-HHHHHHHHHHhcccCCCcccCc
Q 018437 18 FASRYVRAAIPRFKMPDNSMPKEAAYQVINDELML----DGNPRLNLASFVTTWM-E-PECDKLVMASINKNYVDMDEYP 91 (356)
Q Consensus 18 ~~~~~~~~~~~~~~lp~~~~~~~~i~~~~~~~~~~----~~~~~~~l~~~~~~~~-~-~~v~~~i~~~~~~~~~~~~~~~ 91 (356)
..+.++...++. ++|+.|.+.+++++.+.+.+.. +.||+| .+|.++.+ + ..+.+++..++|.+...|..++
T Consensus 33 ~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 109 (486)
T 1js3_A 33 VQPGYLRPLIPA-TAPQEPDTFEDILQDVEKIIMPGVTHWHSPYF--FAYFPTASSYPAMLADMLCGAIGCIGFSWAASP 109 (486)
T ss_dssp CCTTCSGGGSCS-SCCSSCCCHHHHHHHHHHTTGGGCCCTTSTTB--CSSSCCCCCHHHHHHHHHHHHHCCCCSSGGGCH
T ss_pred CCHHHHHHhccc-cCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc--eEeCCCCCCHHHHHHHHHHHHhCcCccccccCh
Confidence 345555666765 7899999999999999987642 457776 35555443 3 4688999999988888888889
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCC----CCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCC------CCCeEEecC
Q 018437 92 VTTELQNRCVNMIAHLFNTPVADD----KTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPY------DKPNIVTGA 161 (356)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~----~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~------~~~~vi~s~ 161 (356)
...++|+++++|+++++|++.+.. ....+++|+|||+||+++++++++.+.++++..+.+. .+..|+++.
T Consensus 110 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~ 189 (486)
T 1js3_A 110 ACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASD 189 (486)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEET
T ss_pred hHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEECC
Confidence 999999999999999999985210 0134899999999999999998875433221111000 012488899
Q ss_pred CCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCc------eEEEEecCCCcccccCCHHHHHHHHHHhhhcc
Q 018437 162 NVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENT------ICVAAILGSTLTGEFEDVKLLHDLLTKKNEET 235 (356)
Q Consensus 162 ~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~------~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~ 235 (356)
++|+++.++++.+|++++.||+++ ++++|+++|+++|++++ ++|++++|+|++|.++|+++|+++|+++
T Consensus 190 ~~h~s~~~~~~~~G~~v~~v~~d~-~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~---- 264 (486)
T 1js3_A 190 QAHSSVERAGLIGGVKLKAIPSDG-KFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEE---- 264 (486)
T ss_dssp TCCHHHHHHHHHHTCEEEEECCCT-TSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHT----
T ss_pred CCcHHHHHHHHhCCCceEEeecCC-CCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHc----
Confidence 999999999999999999999986 59999999999998765 4899999999999999999999999999
Q ss_pred CCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCC---
Q 018437 236 GWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQ--- 311 (356)
Q Consensus 236 ~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~--- 311 (356)
|+|+|||+||+++.+ ..++.+..+. +.++|++++++|||+++|++||+++++++..+.+.+...+.|+.+..
T Consensus 265 --~~~lhvD~a~g~~~~--~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~ 340 (486)
T 1js3_A 265 --DIWLHVDAAYAGSAF--ICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGS 340 (486)
T ss_dssp --TCEEEEECTTGGGGG--GSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESCHHHHHGGGC------------C
T ss_pred --CCEEEEehhhHHHHH--HCHHHHHHhcCccccCeeEEchhhhcCCCcceEEEEEeCHHHHHHHhcCCchhhCCCcccc
Confidence 999999999998765 2333322222 45799999999999999999999999876433333333345553311
Q ss_pred ------CCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 312 ------PTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 312 ------~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
..++++++|+.. ++++|++++.+|.+|++++++++.+++++|.
T Consensus 341 ~~~~~~~~~~~~~~rr~~-~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~ 389 (486)
T 1js3_A 341 GLITDYRHWQLPLGRRFR-SLKMWFVFRMYGVKGLQAYIRKHVQLSHEFE 389 (486)
T ss_dssp CSCCCGGGSSSCSCCCCT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCccccCCCCCCchh-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 123456787775 8999999999999999999999999998874
No 7
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=100.00 E-value=1e-39 Score=323.70 Aligned_cols=325 Identities=16% Similarity=0.175 Sum_probs=252.5
Q ss_pred cccccchhhhhc---CCCCCCCCCCCCHHHHHHHHHHHhhh---cCCCCcccccccCCCChH--HHHHHHHHHhcccCCC
Q 018437 15 SSTFASRYVRAA---IPRFKMPDNSMPKEAAYQVINDELML---DGNPRLNLASFVTTWMEP--ECDKLVMASINKNYVD 86 (356)
Q Consensus 15 ~~~~~~~~~~~~---~~~~~lp~~~~~~~~i~~~~~~~~~~---~~~~~~~l~~~~~~~~~~--~v~~~i~~~~~~~~~~ 86 (356)
-+...+.+++.. ++ .++|+.|.+.+++++.+++.+.. .+||+| .++.+++..+ .+.+++..++|.|...
T Consensus 47 ~~~~~p~~l~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~l~~~~n~~~~~ 123 (504)
T 2okj_A 47 LDFHHPHQLLEGMEGFN-LELSDHPESLEQILVDCRDTLKYGVRTGHPRF--FNQLSTGLDIIGLAGEWLTSTANTNMFT 123 (504)
T ss_dssp CCCCCHHHHHSCBTTBC-CCCCSSCCCHHHHHHHHHHHHHTSCCTTCTTE--ESSSSCCCCHHHHHHHHHHHHHCCBSSC
T ss_pred CCCCCHHHHHHHhhccC-CCCCCCCCCHHHHHHHHHHHhhccCCCCCCCE--EEEccCCCCHHHHHHHHHHHhhccCCCc
Confidence 344445556665 55 47899999999999999886653 347776 3555555443 4467888888888888
Q ss_pred cccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCC-CCCeEEecCCCcc
Q 018437 87 MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPY-DKPNIVTGANVQV 165 (356)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~-~~~~vi~s~~~h~ 165 (356)
|..++...++|+++++|+++++|++.+ ...+++|+|||+||+++++++++.+.+..+.+|... .+.+|+++..+|+
T Consensus 124 ~~~~~~~~~le~~~~~~la~~~g~~~~---~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~ 200 (504)
T 2okj_A 124 YEIAPVFVLMEQITLKKMREIVGWSSK---DGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHY 200 (504)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHTCCSS---SCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCT
T ss_pred hhhChHHHHHHHHHHHHHHHHhCCCCC---CCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchH
Confidence 888899999999999999999999831 145899999999999999998764211111112110 1237999999999
Q ss_pred hHHHHHHhhCC---eeEEEEecCCccccCHHHHHHHHhh------CceEEEEecCCCcccccCCHHHHHHHHHHhhhccC
Q 018437 166 CWEKFARYFEV---ELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETG 236 (356)
Q Consensus 166 s~~~~~~~~G~---~v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~ 236 (356)
++.++++.+|+ +++.||++++ +++|+++|+++|++ +|++|++++|+|++|.++|+++|+++|+++
T Consensus 201 s~~~~~~~~g~g~~~v~~v~~~~~-~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~----- 274 (504)
T 2okj_A 201 SIKKAGAALGFGTDNVILIKCNER-GKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKY----- 274 (504)
T ss_dssp HHHHHHHHTTSCGGGEEEECBCTT-SCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHH-----
T ss_pred HHHHHHHHcCCCcccEEEEecCCC-CCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHc-----
Confidence 99999999887 7999999864 99999999999976 589999999999999999999999999999
Q ss_pred CCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCC----
Q 018437 237 WDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQ---- 311 (356)
Q Consensus 237 ~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~---- 311 (356)
|+|+|||+||+++.. ..++.+..+. +.++|++++++|||+++|++||++++++++.+...+.....|+.+..
T Consensus 275 -g~~lhvD~a~~~~~~--~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~ 351 (504)
T 2okj_A 275 -NLWLHVDAAWGGGLL--MSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYD 351 (504)
T ss_dssp -TCEEEEEETTGGGGG--GCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSC
T ss_pred -CCEEEEehhhhhHHH--hCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCccccc
Confidence 999999999998876 2333333443 34799999999999999999999999886544322223455664321
Q ss_pred -----CCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 312 -----PTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 312 -----~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
.+++++++|++. ++++|++++.+|.+|++++++++.+++++|.
T Consensus 352 ~~~~~~~~~~~~~rr~~-~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~ 399 (504)
T 2okj_A 352 VSYDTGDKAIQCGRHVD-IFKFWLMWKAKGTVGFENQINKCLELAEYLY 399 (504)
T ss_dssp GGGCCGGGSSCSSCBCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCcccCCCCCCCCcc-HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 123457788775 8899999999999999999999999998874
No 8
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=315.47 Aligned_cols=322 Identities=15% Similarity=0.166 Sum_probs=244.9
Q ss_pred ccccchhhhhcCCCCCCCCCCCCHHHHHHHHHHHhhh---cCCCCcccccccCCCChH--HHHHHHHHHhcccCCCcccC
Q 018437 16 STFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELML---DGNPRLNLASFVTTWMEP--ECDKLVMASINKNYVDMDEY 90 (356)
Q Consensus 16 ~~~~~~~~~~~~~~~~lp~~~~~~~~i~~~~~~~~~~---~~~~~~~l~~~~~~~~~~--~v~~~i~~~~~~~~~~~~~~ 90 (356)
+...+.+++..++ ..+|+.|.+.+++++.+++.+.. ..+|+| .++.++.+.+ .+.+++..+.|.+...|..+
T Consensus 67 ~~~~p~~l~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~s 143 (515)
T 2jis_A 67 EWKEPEELKQLLD-LELRSQGESQKQILERCRAVIRYSVKTGHPRF--FNQLFSGLDPHALAGRIITESLNTSQYTYEIA 143 (515)
T ss_dssp CCCCHHHHHHHHC-CCCCSSCCCHHHHHHHHHHHHHHSCCTTSTTE--ESSSCCCCCHHHHHHHHHHHHHCCCTTCTTTC
T ss_pred CCCCHHHHHhhcc-cCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCe--EEEeeCCCCHHHHHHHHHHHHhccCCCchhhc
Confidence 3334455555555 47899999999999999887654 347765 3455554433 44567777777777788889
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCC-CCCCeEEecCCCcchHHH
Q 018437 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKP-YDKPNIVTGANVQVCWEK 169 (356)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~-~~~~~vi~s~~~h~s~~~ 169 (356)
+...++|+++++|+++++|++. ..+++|+|||+||++++.+++..+.+..+.+|.. ..+.+|+++..+|+++.+
T Consensus 144 ~~~~~le~~~~~~la~l~g~~~-----~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~ 218 (515)
T 2jis_A 144 PVFVLMEEEVLRKLRALVGWSS-----GDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQK 218 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSS-----CEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCCC-----CCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHH
Confidence 9999999999999999999984 3589999999999999999876431000011210 012389999999999999
Q ss_pred HHHhhCC---eeEEEEecCCccccCHHHHHHHHhh------CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCc
Q 018437 170 FARYFEV---ELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTP 240 (356)
Q Consensus 170 ~~~~~G~---~v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~ 240 (356)
+++.+|+ +++.||+++ ++++|+++|+++|++ +|++|++++|+|++|.++|+++|+++|+++ |+|
T Consensus 219 ~~~~~g~g~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~------g~~ 291 (515)
T 2jis_A 219 GAAFLGLGTDSVRVVKADE-RGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRH------GLW 291 (515)
T ss_dssp HHHHTTSCGGGEEEECBCT-TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHH------TCE
T ss_pred HHHHcCCCCCcEEEEecCC-CCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHc------CCe
Confidence 9999998 899999986 499999999999976 489999999999999999999999999999 999
Q ss_pred EEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCCCCcCeeEEEEeCC-CCCccccccccCCCCCCC-------
Q 018437 241 IHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTK-DDLPDELVFHINYLGSDQ------- 311 (356)
Q Consensus 241 l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~-~~~~~~~~~~~~~~~~~~------- 311 (356)
+|||+||+++..+ .+.....+. +.++|++++|+|||+++|.|||+++++++ ..+...+...+.|+.+..
T Consensus 292 l~vD~a~~~~~~~--~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~ 369 (515)
T 2jis_A 292 LHVDAAWGGSVLL--SQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVAL 369 (515)
T ss_dssp EEEEETTGGGGGG--CTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC---------CCSCGGG
T ss_pred EEEehhhhhHHHh--ChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccC
Confidence 9999999988773 233333333 34789999999999999999999999876 443322222345553211
Q ss_pred --CCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 312 --PTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 312 --~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
.+++++++|... ++++|++++.+|.+|++++++++.++++||.
T Consensus 370 ~~~~~~~~~~rr~~-al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~ 414 (515)
T 2jis_A 370 DTGDKVVQCGRRVD-CLKLWLMWKAQGDQGLERRIDQAFVLARYLV 414 (515)
T ss_dssp CCGGGCSCSSCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCccc-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 123456777765 7899999999999999999999999998874
No 9
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.8e-37 Score=307.06 Aligned_cols=318 Identities=18% Similarity=0.256 Sum_probs=239.9
Q ss_pred hhhhhcCCCCCCCCCCCCHHHHHHHHHHHhh----hcCCCCcccccccCCCChHHHHH-HHHHHhcccCCCcccCcchHH
Q 018437 21 RYVRAAIPRFKMPDNSMPKEAAYQVINDELM----LDGNPRLNLASFVTTWMEPECDK-LVMASINKNYVDMDEYPVTTE 95 (356)
Q Consensus 21 ~~~~~~~~~~~lp~~~~~~~~i~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~v~~-~i~~~~~~~~~~~~~~~~~~~ 95 (356)
.+....++...+|+.|.+.+++++.+.+.+. .+.+|+| |..+.+++.++.+.+ ++...+|.+...+..++...+
T Consensus 62 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~y-l~~~~~~~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~ 140 (497)
T 2qma_A 62 KALEDAINAVDLDNKNAPLKSVIDDVAELVAKNAIFTQHPDC-IAHLHTPPLMPAVAAEAMIAALNQSMDSWDQASSATY 140 (497)
T ss_dssp HHHHHHHHTCCSSSCCCCHHHHHHHHHHHTTTTSCCTTSTTB-CSSSCCCCBHHHHHHHHHHHHHCCCTTCGGGCHHHHH
T ss_pred HHHHHhccccCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCe-eEeCCCCCcHHHHHHHHHHHhhcccccchhhChHHHH
Confidence 4456667766789999999999999987654 2567776 444445555565544 445666767667778889999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHH-----HhcCCCC--CCCeEEecCCCcchHH
Q 018437 96 LQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR-----KEQGKPY--DKPNIVTGANVQVCWE 168 (356)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~-----~~~g~~~--~~~~vi~s~~~h~s~~ 168 (356)
+|+++++|+++++|++. ...+++|+|||+||+.+++++|+.+..++ +..|... ++.+|+++..+|+++.
T Consensus 141 le~~~~~~la~~~g~~~----~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~ 216 (497)
T 2qma_A 141 VEQKVVNWLCDKYDLSE----KADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQ 216 (497)
T ss_dssp HHHHHHHHHHHHTTCCT----TCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHH
T ss_pred HHHHHHHHHHHHhCCCC----CCCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHH
Confidence 99999999999999974 13589999999999999999876533211 1122111 1237999999999999
Q ss_pred HHHHhhCC---eeEEEEecCCccccCHHHHHHHHhhC------ceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCC
Q 018437 169 KFARYFEV---ELKEVKLEEGYYVMNPVKAVELVDEN------TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDT 239 (356)
Q Consensus 169 ~~~~~~G~---~v~~v~~~~~~~~~d~~~L~~~i~~~------~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~ 239 (356)
++++.+|. +++.||++++ +++|+++|+++|+++ +.+|++++++|++|.++|+++|.++|+++ |+
T Consensus 217 ~~~~~~g~g~~~v~~v~~~~~-~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~------~~ 289 (497)
T 2qma_A 217 KSASWMGLGEKAVMTVDANAD-GTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKH------DM 289 (497)
T ss_dssp HHHHHTTSCGGGEEEECBCTT-SSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHH------TC
T ss_pred HHHHHcCCCcccEEEEecCCC-CcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHc------CC
Confidence 99999987 7999999864 999999999999764 44899999999999999999999999999 99
Q ss_pred cEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCC------C
Q 018437 240 PIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQ------P 312 (356)
Q Consensus 240 ~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~------~ 312 (356)
|+|||+||+++..+. + ....+. +.++|++++|+|||+++|++||+++++++..+ ..+.....|+.... .
T Consensus 290 ~l~vD~a~~~~~~~~--~-~~~~~~gi~~~D~i~~s~hK~l~~p~~~G~l~~~~~~~~-~~~~~~~~yl~~~~~~~~~~~ 365 (497)
T 2qma_A 290 WMHVDGAYGGALILS--S-HKSRLKGVERAHSISVDFHKLFYQTISCGALLVNDKSNF-KFLLHHADYLNREHDELPNLV 365 (497)
T ss_dssp EEEEEETTGGGGGGS--T-TGGGGTTGGGCSEEEEETTTTTCCCSSCEEEEESCGGGG-GGGCC----------------
T ss_pred EEEEehhhhHHHHhC--c-chHhhcCcccCCEEEEcchhccCCCcceEEEEEeCHHHH-HHhcCCchhcCCccccCCCcc
Confidence 999999999887632 2 222222 34789999999999999999999999876544 23333344543321 1
Q ss_pred CccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 313 TFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 313 ~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
..+++++|... ++++|++++.+|.+|+++++++..+++++|.
T Consensus 366 ~~~~~~~r~~~-al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~ 407 (497)
T 2qma_A 366 DKSIATTKRFD-ALKVFMTMQNVGPKALGDMYDHLLAQTLEVA 407 (497)
T ss_dssp ----CCSCCCT-HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCchh-HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 23456888775 7899999999999999999999999988864
No 10
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-36 Score=298.92 Aligned_cols=309 Identities=23% Similarity=0.362 Sum_probs=246.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhh-c----CCCCcccccccCCCChHHHHHHHHHHhc----ccCCCcccCcchHHHHHHH
Q 018437 30 FKMPDNSMPKEAAYQVINDELML-D----GNPRLNLASFVTTWMEPECDKLVMASIN----KNYVDMDEYPVTTELQNRC 100 (356)
Q Consensus 30 ~~lp~~~~~~~~i~~~~~~~~~~-~----~~~~~~l~~~~~~~~~~~v~~~i~~~~~----~~~~~~~~~~~~~~le~~~ 100 (356)
..+|+.|++.+++++.+++.... + .++++ .++.... .+.+.+++.+.++ .+..+|..+++..++|+++
T Consensus 36 ~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 112 (497)
T 3mc6_A 36 PQLPSNGIPQDDVIEELNKLNDLIPHTQWKEGKV--SGAVYHG-GDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEV 112 (497)
T ss_dssp SSCCSSCCCHHHHHHHHHHHHHSSCCCCGGGTCB--SSSCSCC-CHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCCCE--eeecCCC-chHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHH
Confidence 47899999999999999988764 2 23333 2332222 2455555555544 3777888899999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEE
Q 018437 101 VNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180 (356)
Q Consensus 101 ~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~ 180 (356)
++++++++|++.+ ...+++|+||++|+.++++++++....+ +| ..+++|+++.++|+++.++++..|++++.
T Consensus 113 ~~~la~~~g~~~~---~~~~~~~~ggt~a~~~a~~a~~~~~~~~---~g--~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~ 184 (497)
T 3mc6_A 113 VSMVLRMFNAPSD---TGCGTTTSGGTESLLLACLSAKMYALHH---RG--ITEPEIIAPVTAHAGFDKAAYYFGMKLRH 184 (497)
T ss_dssp HHHHHHHTTCCTT---TCCEEEESSHHHHHHHHHHHHHHHHHHH---SC--CSSCEEEEETTSCHHHHHHHHHSCCEEEE
T ss_pred HHHHHHHhCCCCC---CCeEEEcCcHHHHHHHHHHHHHHHHHhc---CC--CCCceEEEeCCccHHHHHHHHHcCCeEEE
Confidence 9999999999831 1458999999999999999998754321 12 22368999999999999999999999999
Q ss_pred EEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCC---
Q 018437 181 VKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP--- 257 (356)
Q Consensus 181 v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~--- 257 (356)
||++++++.+|+++|++++++++++|++++|+|++|.++|+++|.++|+++ |+|+|+|+||+++..+|...
T Consensus 185 v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~l~~i~~la~~~------g~~livD~a~~~~~~~f~~~~~~ 258 (497)
T 3mc6_A 185 VELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKIAQKY------KLPLHVDSCLGSFIVSFMEKAGY 258 (497)
T ss_dssp ECBCTTTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCSCTTTTTHHHHT------TCCEEEETTTTHHHHGGGTTTTC
T ss_pred EecCcccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCCHHHHHHHHHHh------CCEEEEECcchhhhhhhhhhhcc
Confidence 999874589999999999999999999999999999999999999999999 99999999999887765431
Q ss_pred -CC-cccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHh
Q 018437 258 -DL-EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL 335 (356)
Q Consensus 258 -~~-~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~l 335 (356)
.. ++++...++|+++.++|||+++|.|+|+++++++............|.++...+.++.|||+...++++|++++.+
T Consensus 259 ~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l 338 (497)
T 3mc6_A 259 KNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNM 338 (497)
T ss_dssp CSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHH
T ss_pred cCCccccccCCCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHH
Confidence 11 3455567899999999999999999999998865332222223345555543455677999998899999999999
Q ss_pred CHHHHHHHHHHHHhccCccc
Q 018437 336 GFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 336 g~~G~~~~~~~~~~~a~~l~ 355 (356)
+.+|++++.++..+++++|+
T Consensus 339 ~~~~~~~~~~~~~~~~~~l~ 358 (497)
T 3mc6_A 339 GENGYIESCQEIVGAAMKFK 358 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888764
No 11
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=100.00 E-value=1.4e-34 Score=287.49 Aligned_cols=311 Identities=22% Similarity=0.284 Sum_probs=245.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhh----cCCCCcccccccCCCC---hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHH
Q 018437 30 FKMPDNSMPKEAAYQVINDELML----DGNPRLNLASFVTTWM---EPECDKLVMASINKNYVDMDEYPVTTELQNRCVN 102 (356)
Q Consensus 30 ~~lp~~~~~~~~i~~~~~~~~~~----~~~~~~~l~~~~~~~~---~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~ 102 (356)
..+|+.|++.+++++.+++.... +.++++ .++..... .+.+.+++....+.+...+..+++..++|+++++
T Consensus 69 ~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~ 146 (514)
T 3mad_A 69 ARLPRAGLPRAEILAEIAAMGAAESPAWRDGYA--SGAVYHGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVA 146 (514)
T ss_dssp SSCCSSCCCHHHHHHHHHHHHHHHHHHHHTTCB--SSSCSCCCHHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHhccCCCCCCCce--EEEecCCCCCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHH
Confidence 46789999999999999887532 334544 23222221 2355666666777788888888999999999999
Q ss_pred HHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEE
Q 018437 103 MIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVK 182 (356)
Q Consensus 103 ~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~ 182 (356)
++++++|++.+. ....+++|+||++|+..++++++++..++ .| ..+++|+++.++|.++.++++.+|++++.||
T Consensus 147 ~la~~~g~~~~~-~~v~~~~t~ggt~a~~~al~a~~~~g~~~---~g--~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~ 220 (514)
T 3mad_A 147 MTAHMLGGDAAG-GTVCGTVTSGGTESLLLAMKTYRDWARAT---KG--ITAPEAVVPVSAHAAFDKAAQYFGIKLVRTP 220 (514)
T ss_dssp HHHHHTTGGGGT-SCCEEEEESSHHHHHHHHHHHHHHHHHHH---HC--CSSCEEEEETTSCTHHHHHHHHHTCEEEEEC
T ss_pred HHHHHcCCCCcc-CCcceEEcCcHHHHHHHHHHHHHHHhhhh---cC--CCCCeEEEeCccchHHHHHHHHcCCeeEEee
Confidence 999999998311 12345999999999999999998764321 12 2247999999999999999999999999999
Q ss_pred ecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccC----CC
Q 018437 183 LEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY----PD 258 (356)
Q Consensus 183 ~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~----~~ 258 (356)
+++ ++.+|+++|++++++++++|++++++|++|.++|+++|.++|+++ |+|+|+|+||++++.++.. +.
T Consensus 221 ~~~-~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~------~i~livDea~~~~~~~~~~~~g~~~ 293 (514)
T 3mad_A 221 LDA-DYRADVAAMREAITPNTVVVAGSAPGYPHGVVDPIPEIAALAAEH------GIGCHVDACLGGFILPWAERLGYPV 293 (514)
T ss_dssp BCT-TSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCCHHHHHHHHHHH------TCEEEEECTTTTTTHHHHHHTTCCC
T ss_pred eCC-CCCCCHHHHHHHhccCCEEEEEeCCCCCCccccCHHHHHHHHHHh------CCeEEEecccccccchhHHhcCCCC
Confidence 987 499999999999999999999999999999999999999999999 9999999999988765321 11
Q ss_pred CcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHH
Q 018437 259 LEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFE 338 (356)
Q Consensus 259 ~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~ 338 (356)
..+++...++|++++++||++++|.|+|+++++++............|.++....+++.|+++...++++|+++..++.+
T Consensus 294 ~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~ 373 (514)
T 3mad_A 294 PPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEE 373 (514)
T ss_dssp CCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHH
T ss_pred CcccccCCCCcEEEECchhccCCCCCeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHH
Confidence 23455566899999999999999999999999875433222222334554433334567899998889999999999999
Q ss_pred HHHHHHHHHHhccCccc
Q 018437 339 EITFTFISSLKVCPFLV 355 (356)
Q Consensus 339 G~~~~~~~~~~~a~~l~ 355 (356)
|+++++++..+++++|.
T Consensus 374 ~~~~~~~~~~~~~~~l~ 390 (514)
T 3mad_A 374 GYLDATRRILQAADRLK 390 (514)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999888764
No 12
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.9e-33 Score=268.18 Aligned_cols=308 Identities=21% Similarity=0.296 Sum_probs=245.4
Q ss_pred CCCCCCCCHHHHHHHHHHHhhhcC---CCCcccccccCCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHH
Q 018437 31 KMPDNSMPKEAAYQVINDELMLDG---NPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHL 107 (356)
Q Consensus 31 ~lp~~~~~~~~i~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l 107 (356)
.+|+.+.+..++++.+.+....+. ++.+ .++.++++++.+.+++.+.+..+..++..+++..+++++++++++++
T Consensus 4 ~lp~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~ 81 (397)
T 3f9t_A 4 NMQEKGVSEKEILEELKKYRSLDLKYEDGNI--FGSMCSNVLPITRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGSL 81 (397)
T ss_dssp SCCSSCCCHHHHHHHHHHHHTTSCCGGGTCB--CSCSCCCCCTHHHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHhhccCCCCCCCCe--EEEecCCCcHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHH
Confidence 579999999999999998765422 2333 34445566678899998888776666766778899999999999999
Q ss_pred hCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCc
Q 018437 108 FNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGY 187 (356)
Q Consensus 108 ~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~ 187 (356)
+|++. ..+++|+||++|+..++.+++.++...+........+++|+++.++|+++..+++..|++++.||++++
T Consensus 82 ~~~~~-----~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~- 155 (397)
T 3f9t_A 82 LNNKD-----AYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKED- 155 (397)
T ss_dssp TTCTT-----CEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCTT-
T ss_pred hCCCC-----CCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCCC-
Confidence 99986 348999999999999999998875544332222233579999999999999999999999999999875
Q ss_pred cccCHHHHHHHHhh-CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCC-------CC
Q 018437 188 YVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP-------DL 259 (356)
Q Consensus 188 ~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~-------~~ 259 (356)
+.+|+++|++++++ ++++|++++|+||+|.+.|+++|.++|+++ |+++|+|++|+++..++... ..
T Consensus 156 ~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~------~~~li~Dea~~~~~~~~~~~~~~~~~~~~ 229 (397)
T 3f9t_A 156 YTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAKEN------NIYIHVDAAFGGLVIPFLDDKYKKKGVNY 229 (397)
T ss_dssp SSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHHHH------TCEEEEECTTGGGTGGGCCGGGCCTTCCC
T ss_pred CcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHHHh------CCeEEEEccccchhhhhcccccccccccc
Confidence 89999999999998 899999999999999999999999999999 99999999999887765331 11
Q ss_pred cccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHH
Q 018437 260 EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEE 339 (356)
Q Consensus 260 ~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G 339 (356)
.+++.. ++|+++.++||++++|.++|+++++++... +.+.....|+.... ...+.++++....+++++++..++..+
T Consensus 230 ~~~~~~-~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~a~~~~~~~~~ 306 (397)
T 3f9t_A 230 KFDFSL-GVDSITIDPHKMGHCPIPSGGILFKDIGYK-RYLDVDAPYLTETR-QATILGTRVGFGGACTYAVLRYLGREG 306 (397)
T ss_dssp CCSGGG-TCSEEECCTTTTTCCCSSCEEEEESSGGGG-GGTCEECTTSSSSE-ECSSCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred cccccc-cCCeEEEccccccCCCCCceEEEEeCHHHH-HhhccCCccccCCC-ccccccccccchHHHHHHHHHHHhHHH
Confidence 344445 899999999999999999999999875433 22222234443321 223457888777899999999999999
Q ss_pred HHHHHHHHHhccCccc
Q 018437 340 ITFTFISSLKVCPFLV 355 (356)
Q Consensus 340 ~~~~~~~~~~~a~~l~ 355 (356)
++++.++..+++++|.
T Consensus 307 ~~~~~~~~~~~~~~l~ 322 (397)
T 3f9t_A 307 QRKIVNECMENTLYLY 322 (397)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999888877653
No 13
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.98 E-value=1.5e-32 Score=269.02 Aligned_cols=290 Identities=14% Similarity=0.088 Sum_probs=213.4
Q ss_pred hhcCCCCCCCCCCCCHHHHHHHHHHHhhhcCCCCcccccccCCCChHHHHHHHHHH-----hcccC-----C----Cccc
Q 018437 24 RAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMAS-----INKNY-----V----DMDE 89 (356)
Q Consensus 24 ~~~~~~~~lp~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~i~~~-----~~~~~-----~----~~~~ 89 (356)
+..++..++|+.|++++++.+.+++....+....++ ...+++.++.+.+++... ++.+. . .+..
T Consensus 50 ~~~~~~~~lp~~g~~~~~i~~~~~~~~~~~~~~yld--~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (456)
T 2z67_A 50 EDVFNHRKIPENGIDDEKIKLFLKFLSMMDTDKDPK--SVRIGEREARTYSKIHEELSSGFCHGIGRSGNLVDPQPKASG 127 (456)
T ss_dssp HHHHHHCSCCSSCCCHHHHHHHHHHHHTTBGGGCTT--CEECSSCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCTTBHH
T ss_pred HHhhccCCCCCCCCCHHHHHHHHHHHHhcccccccc--ccccccccccccccccCccccccCCCccHHHHHHhhCccccc
Confidence 444556689999999999998887765544322222 222334444555554431 12111 0 1122
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChh-HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHH
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS-EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE 168 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt-~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~ 168 (356)
++...++++++++++++++|++. . +++|+||| .+|..++.+++.. . .+++|+++.++|+++.
T Consensus 128 ~~~~~~~~~~~~~~la~~~g~~~-----~-~~~t~g~te~a~~~al~~~~~~-~----------~~~~vi~~~~~h~s~~ 190 (456)
T 2z67_A 128 ASIMYALTNKILESFFKQLGLNV-----H-AIATPISTGMSISLCLSAARKK-Y----------GSNVVIYPYASHKSPI 190 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCC-----E-EEEESSCHHHHHHHHHHHHHHH-H----------CCCEEEEECCCCHHHH
T ss_pred CcHHHHHHHHHHHHHHHHcCCCC-----C-EEEeCcHHHHHHHHHHHHHHHh-c----------CCCEEEEECCCcHHHH
Confidence 33578899999999999999985 3 89999999 5676677776542 1 1467888999999999
Q ss_pred HHHHhhCCeeEEEEec--CCccccCHHHHHHHH-h----hCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcE
Q 018437 169 KFARYFEVELKEVKLE--EGYYVMNPVKAVELV-D----ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPI 241 (356)
Q Consensus 169 ~~~~~~G~~v~~v~~~--~~~~~~d~~~L~~~i-~----~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l 241 (356)
++++..|++++.|++. ++++.+|+++|+++| + .++++|+++.+||++|.++|+++|.++|+++ |+|+
T Consensus 191 ~~~~~~G~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~------g~~v 264 (456)
T 2z67_A 191 KAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENY------DIPH 264 (456)
T ss_dssp HHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHH------TCCE
T ss_pred HHHHHcCCCceEEEEeccCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHc------CCcE
Confidence 9999999999998872 235999999999999 5 3677888999999999999999999999999 9999
Q ss_pred EEecccccccccccCCCCccccc--CCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCC
Q 018437 242 HVDAASGGFIAPFLYPDLEWDFR--LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFS 319 (356)
Q Consensus 242 ~vD~a~~~~~~~~~~~~~~~~~~--~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 319 (356)
|||+||+.+..++. +.+.. ..++|++++|+|||+++|.|+|++++++++.+ ..+ .+.|. |+
T Consensus 265 ~vD~A~~~~~~g~~----~~~~~~~~~~~D~~~~s~hK~~~~p~g~G~l~~~~~~~~-~~l--~~~~~----------g~ 327 (456)
T 2z67_A 265 IINGAYAIQNNYYL----EKLKKAFKYRVDAVVSSSDKNLLTPIGGGLVYSTDAEFI-KEI--SLSYP----------GR 327 (456)
T ss_dssp EEECTTTTTCHHHH----HHHHHHHTSCCSEEEEEHHHHHCCCSSCEEEEESCHHHH-HHH--HTTSC----------SC
T ss_pred EEECcchHHHHHhh----HHHHHhhCCCCCEEEEcCCCCcCCCCCeEEEEEcCHHHH-hhc--CcCCC----------CC
Confidence 99999987655321 11111 11799999999999999999999999754332 121 22333 23
Q ss_pred CChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 320 KGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 320 r~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
++...++++|+++..++.+|++++.++..++++||.
T Consensus 328 ~~~~~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~ 363 (456)
T 2z67_A 328 ASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLD 363 (456)
T ss_dssp BCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334458899999999999999999999999988874
No 14
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.97 E-value=1.6e-31 Score=257.60 Aligned_cols=291 Identities=13% Similarity=0.068 Sum_probs=207.6
Q ss_pred hhcCCCCCCCCCCCCHHHHHHHHHHHhhhcCCC------------Cc-------ccccccCCCChHHHHHHHHHHhcccC
Q 018437 24 RAAIPRFKMPDNSMPKEAAYQVINDELMLDGNP------------RL-------NLASFVTTWMEPECDKLVMASINKNY 84 (356)
Q Consensus 24 ~~~~~~~~lp~~~~~~~~i~~~~~~~~~~~~~~------------~~-------~l~~~~~~~~~~~v~~~i~~~~~~~~ 84 (356)
+..+..-.+|+.|++.++|...+.+...++.+. +. .+++|+++. ....+++. .|+
T Consensus 15 ~~~~~~~~~p~~g~~~~~i~~~l~~~~~~d~~~~~~~~~~geregrv~~~~~~~r~~g~~hg~--~~~~d~l~----~~~ 88 (450)
T 3bc8_A 15 RLLLEQGKCPEDGWDESTLELFLHELAVMDSNNFLGNCGVGEREGRVASALVARRHYRFIHGI--GRSGDISA----VQP 88 (450)
T ss_dssp HHHHHHCCCCSSCCCHHHHHHHHHHHHHTBGGGCTTCCCCSSCCCCCSCHHHHHHTTTCCSCB--CC-----------CC
T ss_pred HHHHHhccCCccCCCHHHHHHHHHHHhhCCCCccccccccCcccceEecccccCCccceecch--hHHHHHHH----hCc
Confidence 444555689999999999999998876653211 11 011233322 11223332 244
Q ss_pred CCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChh-HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCC
Q 018437 85 VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS-EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANV 163 (356)
Q Consensus 85 ~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt-~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~ 163 (356)
.+..+|....+|+.+..|+.+++|++.. ..+++++|+| .++.+++.+++... ..++.||++...
T Consensus 89 -~~~~~~~~~~~e~~~~~~~~~~lGlp~~----~~~~lV~GaT~~~~a~~L~aar~~~----------~~~~~viv~r~a 153 (450)
T 3bc8_A 89 -KAAGSSLLNKITNSLVLNVIKLAGVHSV----ASCFVVPMATGMSLTLCFLTLRHKR----------PKAKYIIWPRID 153 (450)
T ss_dssp -SBHHHHHHHHHHHHHHHHHHHHHTCTTC----CEEEEESSCHHHHHHHHHHHHHHHC----------TTCCEEEEECCC
T ss_pred -cccCCcHHHHHHHHHHHHHHHhCCCCCC----ceEEEECCHHHHHHHHHHHHcchhh----------cCCCEEEEECCc
Confidence 5556777889999999999999999862 3468999998 66666666666521 113689999999
Q ss_pred cchHHHHHHhhCCeeEEEEec--CCccccCHHHHHHHHhh----CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCC
Q 018437 164 QVCWEKFARYFEVELKEVKLE--EGYYVMNPVKAVELVDE----NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGW 237 (356)
Q Consensus 164 h~s~~~~~~~~G~~v~~v~~~--~~~~~~d~~~L~~~i~~----~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~ 237 (356)
|.|+.+++.++|+++++|+.. ++.+.||+++|+++|++ .+.+|+.+.+++.+|.++||++|+++|++|
T Consensus 154 HkSv~kAl~l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~------ 227 (450)
T 3bc8_A 154 QKSCFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANY------ 227 (450)
T ss_dssp CHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHH------
T ss_pred HHHHHHHHHHcCCeeEEEEeeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHC------
Confidence 999999999999999888762 33699999999999975 234555555555567899999999999999
Q ss_pred CCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCcccc
Q 018437 238 DTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLN 317 (356)
Q Consensus 238 ~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (356)
|+|+|||+|||+.... ..+.++..+...++|+++.|+|||+++|.|++++++|+++.+. .. ...|.+
T Consensus 228 gi~l~VD~A~G~~~~~-~~~l~~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~-~~--~~~~~g--------- 294 (450)
T 3bc8_A 228 DIPHVVNNAYGLQSSK-CMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQ-DI--SKMYPG--------- 294 (450)
T ss_dssp TCCEEEECTTTTTCHH-HHHHHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHH-HH--HHHSCS---------
T ss_pred CCeEEEECCCchhhhh-hHhHHHHHhcccCCCEEEECCccCCCchhccEEEEecCHHHHH-HH--HHHhhc---------
Confidence 9999999999975442 1110101111258999999999999999999999998654432 21 122332
Q ss_pred CCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 318 FSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 318 ~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
+.+....+.+|.++..+|.+||++.++++++++++|+
T Consensus 295 -~~s~SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~ 331 (450)
T 3bc8_A 295 -RASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLS 331 (450)
T ss_dssp -CBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2223457999999999999999999999999888774
No 15
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.96 E-value=5.4e-27 Score=230.68 Aligned_cols=297 Identities=9% Similarity=0.012 Sum_probs=213.6
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhhcCC---CCcccccccCCCChHHHHHHHHHHhc-ccCCCcc-cCcchHHHHHHHHHHH
Q 018437 30 FKMPDNSMPKEAAYQVINDELMLDGN---PRLNLASFVTTWMEPECDKLVMASIN-KNYVDMD-EYPVTTELQNRCVNMI 104 (356)
Q Consensus 30 ~~lp~~~~~~~~i~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~v~~~i~~~~~-~~~~~~~-~~~~~~~le~~~~~~l 104 (356)
..+| +++..++++.+.+....+.+ ..++|+ ..+....|.+.+.+.+.+. .+++.+. .+++..++++++++++
T Consensus 40 ~~lp--~~~e~~~~~~~~~l~~~~~~~~~~~~~lg-~~~~~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l 116 (474)
T 1wyu_B 40 PRLP--EVDELTLVRHYTGLSRRQVGVDTTFYPLG-SCTMKYNPKLHEEAARLFADLHPYQDPRTAQGALRLMWELGEYL 116 (474)
T ss_dssp CCCC--CCCHHHHHHHHHHHHTTCCCTTTSCCCBT-TTCCCCCCHHHHHHHHTTSSCCTTSCGGGCHHHHHHHHHHHHHH
T ss_pred CCCC--CCCHHHHHHHHHHHHhCCCCcccCccccc-cccccCCHHHHHHHHHHHHhcCCCCchhhChHHHHHHHHHHHHH
Confidence 4677 79999999999887765432 223354 4444444556665554432 2333333 4778899999999999
Q ss_pred HHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec
Q 018437 105 AHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (356)
Q Consensus 105 a~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (356)
++++|++. ..++|+||++|+..++++++..... +|...++++|+++.++|.++..+++..|++++.||++
T Consensus 117 a~~~g~~~------~~~~~~ggt~a~~~al~~~~~~~~~----~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~ 186 (474)
T 1wyu_B 117 KALTGMDA------ITLEPAAGAHGELTGILIIRAYHED----RGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSG 186 (474)
T ss_dssp HHHHTCSE------EECCCSSHHHHHHHHHHHHHHHHHH----TTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBC
T ss_pred HHHHCCCc------eeecChHHHHHHHHHHHHHHHHHHh----cCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCC
Confidence 99999974 2568899999999998887653221 1210123589999999999999999999999999998
Q ss_pred CCccccCHHHHHHHHhhCceEEEEecCCCccccc-CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccc
Q 018437 185 EGYYVMNPVKAVELVDENTICVAAILGSTLTGEF-EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF 263 (356)
Q Consensus 185 ~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~-~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~ 263 (356)
++ +.+|+++|++++++++++|++++|| ++|.+ +|+++|.++|+++ |+++|+|++|+.+..++. ..
T Consensus 187 ~~-~~~d~~~L~~~i~~~t~~v~~~~pn-~~G~~~~~l~~i~~l~~~~------g~~li~Dea~~~~~~g~~------~~ 252 (474)
T 1wyu_B 187 PE-GEVDLEALKRELGPHVAALMLTNPN-TLGLFERRILEISRLCKEA------GVQLYYDGANLNAIMGWA------RP 252 (474)
T ss_dssp TT-SSBCHHHHHHHCSTTEEEEEECSSC-TTSCCCTTHHHHHHHHHHH------TCEEEEEGGGGGGTTTTC------CH
T ss_pred CC-CCcCHHHHHHhhCCCceEEEEECCC-CCcccCCCHHHHHHHHHHc------CCEEEEeCchhhhhccCC------Cc
Confidence 64 9999999999999899999999985 79999 7999999999999 999999999976554211 11
Q ss_pred cCCCceEEEEcCCcCCCCCc-----CeeEEEEeCCCCCccccccc-c-----CCC---CCCCC-CccccCCCChhHHHHH
Q 018437 264 RLPLVKSINVSGHKYGLVYA-----GVGWVVWRTKDDLPDELVFH-I-----NYL---GSDQP-TFTLNFSKGSSQIIAQ 328 (356)
Q Consensus 264 ~~~~~Ds~~~~~hK~l~~P~-----g~g~l~~~~~~~~~~~~~~~-~-----~~~---~~~~~-~~~~~~tr~~~~~~~~ 328 (356)
...++|+++.|+||++++|. ++|+++++++ .. +.+... . .|. ...+. .....++.+....++.
T Consensus 253 ~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~-l~-~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa 330 (474)
T 1wyu_B 253 GDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAH-LA-PYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRA 330 (474)
T ss_dssp HHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGG-GG-GGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHH
T ss_pred ccCCCcEEEEeCccccccCCCCCCCCeEEEEEcHH-HH-HhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHH
Confidence 11268999999999999885 6999999764 22 221100 0 000 00000 0000123345567788
Q ss_pred HHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 329 YYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 329 ~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
|.+++.+|.++++++.++..++++||.
T Consensus 331 ~~~l~~~g~~~l~~~~~~~~~~~~~l~ 357 (474)
T 1wyu_B 331 WAYIRTLGLEGLKKAAALAVLNARYLK 357 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899998999999999998888887764
No 16
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.94 E-value=2.6e-26 Score=220.39 Aligned_cols=257 Identities=12% Similarity=0.043 Sum_probs=193.9
Q ss_pred cccccCCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHH
Q 018437 60 LASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (356)
Q Consensus 60 l~~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~ 139 (356)
+....|..+++.+.+++.+.+. .+ .++....+.+++++++++++|.+.. ...++|+||++|+..++.++.+
T Consensus 16 ~~~pgp~~~~~~v~~a~~~~~~---~~--~~~~~~~~~~~~~~~la~~~~~~~~----~~v~~~~sgt~al~~~~~~~~~ 86 (411)
T 3nnk_A 16 LMGPGPINADPRVLRAMSSQLI---GQ--YDPAMTHYMNEVMALYRGVFRTENR----WTMLVDGTSRAGIEAILVSAIR 86 (411)
T ss_dssp EESSSCCCCCHHHHHHHTSCCC---CT--TCHHHHHHHHHHHHHHHHHHTCCCS----EEEEEESCHHHHHHHHHHHHCC
T ss_pred eecCCCCCCCHHHHHHhhcccc---cc--ccHHHHHHHHHHHHHHHHHhCCCCC----cEEEECCCcHHHHHHHHHHhcC
Confidence 3344455556777777654331 11 2345567788999999999999852 2367888999999999988743
Q ss_pred HHHHHHHhcCCCCCCCeEEecCCCcch--HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh-CceEEEEecCCCccc
Q 018437 140 KWQQKRKEQGKPYDKPNIVTGANVQVC--WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTG 216 (356)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~s~~~h~s--~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG 216 (356)
+ +++|+++.++|++ +...++..|++++.+|++.+ +.+|+++|++++++ ++++|++++++|+||
T Consensus 87 ~-------------gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~v~~~~~~nptG 152 (411)
T 3nnk_A 87 P-------------GDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVPWG-EVFTPDQVEDAVKRIRPRLLLTVQGDTSTT 152 (411)
T ss_dssp T-------------TCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTT-CCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred C-------------CCEEEEecCCchHHHHHHHHHHcCCeEEEEecCCC-CCCCHHHHHHHHhhCCCeEEEEeCCCCCcc
Confidence 2 5799999999988 88899999999999999764 89999999999987 899999999999999
Q ss_pred ccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCC
Q 018437 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (356)
Q Consensus 217 ~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~ 296 (356)
.+.|+++|.++|+++ |+++|+|++++.+..+ .++...++|.++.++||++++|.|+|+++++++ ..
T Consensus 153 ~~~~l~~i~~l~~~~------~~~li~Dea~~~~~~~-------~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~-~~ 218 (411)
T 3nnk_A 153 MLQPLAELGEICRRY------DALFYTDATASLGGNP-------LETDVWGLDAVSAGMQKCLGGPSGTSPITLSAR-ME 218 (411)
T ss_dssp EECCCTTHHHHHHHH------TCEEEEECTTTBTTBC-------CCTTTTTCSEEECCSTTTTCCCSSEEEEEECHH-HH
T ss_pred eeccHHHHHHHHHHc------CCEEEEECCcccCCcc-------cchhccCCcEEEecCccccCCCCceEEEEECHH-HH
Confidence 999999999999999 9999999998765442 333344789999999999999999999998653 21
Q ss_pred ccccc----cccCCCCCCC-----------------------CCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHh
Q 018437 297 PDELV----FHINYLGSDQ-----------------------PTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLK 349 (356)
Q Consensus 297 ~~~~~----~~~~~~~~~~-----------------------~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~ 349 (356)
+.+. ..+.|.++.. ......+|.+....+++.++++.+..+|++++.++..+
T Consensus 219 -~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~ 297 (411)
T 3nnk_A 219 -EAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKL 297 (411)
T ss_dssp -HHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred -HHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 1110 1112222211 00112367777778888888888888888888888887
Q ss_pred ccCcc
Q 018437 350 VCPFL 354 (356)
Q Consensus 350 ~a~~l 354 (356)
++++|
T Consensus 298 ~~~~l 302 (411)
T 3nnk_A 298 HGDAL 302 (411)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77665
No 17
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.94 E-value=4.2e-27 Score=224.40 Aligned_cols=296 Identities=14% Similarity=0.024 Sum_probs=204.5
Q ss_pred hhcCCCCCCCCCCCCHHHHHHHHHHHhhhcCCCCc-ccccccCCCChHHHHHHHH-HHhc-cc----CCCc-ccCc---c
Q 018437 24 RAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRL-NLASFVTTWMEPECDKLVM-ASIN-KN----YVDM-DEYP---V 92 (356)
Q Consensus 24 ~~~~~~~~lp~~~~~~~~i~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~v~~~i~-~~~~-~~----~~~~-~~~~---~ 92 (356)
+..+.+-.+|+.|.+...|...+.+...++.+... |.+.+.--. .....++. ..++ .+ .++- +..| +
T Consensus 33 ~~ll~~r~~P~~g~~d~~ie~~l~~la~mdsnn~~~~~g~GERE~--Rv~s~lv~rrh~~~~HGiGRSGd~~~~QPKAaG 110 (501)
T 3hl2_A 33 RLLLEKGKCPENGWDESTLELFLHELAIMDSNNFLGNCGVGEREG--RVASALVARRHYRFIHGIGRSGDISAVQPKAAG 110 (501)
T ss_dssp HHHHHHCCCCSSCCCHHHHHHHHHHHHTTBGGGCSSCCCCSSCCC--CCSCHHHHHHTTTCCSCBSCSSCTTCCCTTBHH
T ss_pred HHHHHcCCCCccCCCHHHHHHHHHHHHhhccCCCcccCCcccchH--HHHHHHHHhhccCcccCCCCccccccCCCCccc
Confidence 44566678999999999999999988777643221 111111111 11122222 2222 11 1111 1122 2
Q ss_pred h----HHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHH
Q 018437 93 T----TELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE 168 (356)
Q Consensus 93 ~----~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~ 168 (356)
. .--+..+.+|++.+ |++. .....+++|+|.+++..++++.++.+ + .+++||+|...|.|+.
T Consensus 111 ssll~~ltn~l~ld~L~~~-G~~~----~~~~flVnGsTgg~lamilaa~r~~r--------p-g~d~VIvpRn~HKSv~ 176 (501)
T 3hl2_A 111 SSLLNKITNSLVLDIIKLA-GVHT----VANCFVVPMATGMSLTLCFLTLRHKR--------P-KAKYIIWPRIDQKSCF 176 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCTT----CCEEEEESSCHHHHHHHHHHHHHHHC--------T-TCCEEEEECCCCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHc-CCCC----CCcEEEECcHHHHHHHHHHHHcCccc--------C-CCCEEEEecchHHHHH
Confidence 2 23345566777777 9985 23468889999777777776655310 0 1378999999999999
Q ss_pred HHHHhhCCeeEEEEe--cCCccccCHHHHHHHHhhC---ceEEEEecCCCc-ccccCCHHHHHHHHHHhhhccCCCCcEE
Q 018437 169 KFARYFEVELKEVKL--EEGYYVMNPVKAVELVDEN---TICVAAILGSTL-TGEFEDVKLLHDLLTKKNEETGWDTPIH 242 (356)
Q Consensus 169 ~~~~~~G~~v~~v~~--~~~~~~~d~~~L~~~i~~~---~~~v~~~~~~~~-tG~~~~i~~I~~i~~~~~~~~~~~~~l~ 242 (356)
+++.+.|+++++|+. +++...+|+++|+++|++. .++++++.+++. .|.++||++|+++|++| |+|+|
T Consensus 177 kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~------gIpll 250 (501)
T 3hl2_A 177 KSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANY------DIPHI 250 (501)
T ss_dssp HHHHHTTCEEEEECEEEETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHH------TCCEE
T ss_pred HHHHHcCCeEEEEeeeecccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHc------CCeEE
Confidence 999999999999987 3335899999999999762 344444444444 45779999999999999 99999
Q ss_pred EecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCCCCh
Q 018437 243 VDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGS 322 (356)
Q Consensus 243 vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~ 322 (356)
||+|||+...++ ...++..++..++|.++.|+||++++|.|.+++++++++.+... ...| +|+++.
T Consensus 251 VDeAhGah~~~~-~~lp~sA~~~GrAD~vVqS~HK~llvpIGG~ii~~~d~e~l~~~---~~~y----------PGr~S~ 316 (501)
T 3hl2_A 251 VNNAYGVQSSKC-MHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEI---SKMY----------PGRASA 316 (501)
T ss_dssp EECTTCTTCHHH-HHHHHHHHHHSCCCEEEEEHHHHHCCCSSCEEEEESCHHHHHHH---HHTS----------CSCBCS
T ss_pred EeCcchhhhhhh-hhhHHHHHhcCCCcEEEecccccceeecCceEEEeCCHHHHHHH---HHhC----------CCCCCC
Confidence 999999866422 11111122233499999999999999999888888876544221 1222 367778
Q ss_pred hHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 323 SQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 323 ~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
..++.+|++++.+|.+||++++++++++++||+
T Consensus 317 Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~ 349 (501)
T 3hl2_A 317 SPSLDVLITLLSLGSNGYKKLLKERKEMFSYLS 349 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999885
No 18
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.94 E-value=1.4e-25 Score=212.46 Aligned_cols=253 Identities=15% Similarity=0.071 Sum_probs=188.2
Q ss_pred CCCChHHHHHHHHHHhcccCCCccc----CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASINKNYVDMDE----YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~~~~~~~----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~ 140 (356)
++++++.+.+++.+.+.....++.. ......+.+++++++++++|+++ ..+++|+||++|+..++.++...
T Consensus 9 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-----~~i~~~~g~~~a~~~~~~~~~~~ 83 (382)
T 4hvk_A 9 AKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGG-----GTVVFTSGATEANNLAIIGYAMR 83 (382)
T ss_dssp CCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTT-----EEEEEESSHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCc-----CeEEEECCchHHHHHHHHHhhhh
Confidence 3455678888888877543332222 23556788899999999999975 34899999999999999988632
Q ss_pred HHHHHHhcCCCCCCCeEEecCCCcchHHHHHHh---hCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccc
Q 018437 141 WQQKRKEQGKPYDKPNIVTGANVQVCWEKFARY---FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (356)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~---~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~ 217 (356)
+.+ .+++|+++.++|+++...+.. .|++++.+|++++ +.+|+++|++++++++++|++++++||||.
T Consensus 84 ~~~---------~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~v~~~~~~nptG~ 153 (382)
T 4hvk_A 84 NAR---------KGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKY-GEVDVSFIDQKLRDDTILVSVQHANNEIGT 153 (382)
T ss_dssp HGG---------GCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTT-SCBCHHHHHHHCCTTEEEEECCSBCTTTCB
T ss_pred hcC---------CCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCC-CCcCHHHHHHHhccCceEEEEECCCCCcee
Confidence 100 157999999999998877665 4999999999864 899999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCc
Q 018437 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (356)
Q Consensus 218 ~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~ 297 (356)
+.|+++|.++|+++ ++ +|+|++++.+..+ .++...++|.++.++||+ ++|.|+|+++++++..+.
T Consensus 154 ~~~~~~i~~l~~~~------~~-li~D~a~~~~~~~-------~~~~~~~~d~~~~s~~K~-~g~~g~g~~~~~~~~~~~ 218 (382)
T 4hvk_A 154 IQPVEEISEVLAGK------AA-LHIDATASVGQIE-------VDVEKIGADMLTISSNDI-YGPKGVGALWIRKEAKLQ 218 (382)
T ss_dssp BCCHHHHHHHHSSS------SE-EEEECTTTBTTBC-------CCHHHHTCSEEEEESGGG-TSCTTCEEEEEETTCCCC
T ss_pred eCCHHHHHHHHHHc------CE-EEEEhHHhcCCCC-------CCchhcCCCEEEEeHHHh-cCCCceEEEEEcCccCcC
Confidence 99999999999999 99 9999998764432 222223689999999997 578899999998754221
Q ss_pred cccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 298 DELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
..+.++........++.+....+++.+++..+ .++++++.++..+++++|
T Consensus 219 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~l 268 (382)
T 4hvk_A 219 ------PVILGGGQENGLRSGSENVPSIVGFGKAAEIT-AMEWREEAERLRRLRDRI 268 (382)
T ss_dssp ------CSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred ------cccccCCCcCccccCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHH
Confidence 11112211111123565666566666666643 467888888877777665
No 19
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.94 E-value=1.5e-25 Score=212.91 Aligned_cols=253 Identities=15% Similarity=0.067 Sum_probs=184.6
Q ss_pred CCCChHHHHHHHHHHhcccCCCc----ccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASINKNYVDM----DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~~~~~----~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~ 140 (356)
++++++.+.+++.+.+.....++ ..++.......++++++++++|+++ ..+++|+||++|+..++.++...
T Consensus 9 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~-----~~v~~~~g~t~a~~~~~~~l~~~ 83 (382)
T 4eb5_A 9 AKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGG-----GTVVFTSGATEANNLAIIGYAMR 83 (382)
T ss_dssp CCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTT-----EEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCC-----CeEEEcCchHHHHHHHHHHHHhh
Confidence 34566888898887775422222 1223456778889999999999875 24899999999999999988732
Q ss_pred HHHHHHhcCCCCCCCeEEecCCCcchHHHHHHh---hCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccc
Q 018437 141 WQQKRKEQGKPYDKPNIVTGANVQVCWEKFARY---FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (356)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~---~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~ 217 (356)
+.. .+++|+++.++|+++...+.. .|++++.+|++++ +.+|+++|++++++++++|++++++||||.
T Consensus 84 ~~~---------~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~v~~~~~~nptG~ 153 (382)
T 4eb5_A 84 NAR---------KGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKY-GEVDVSFIDQKLRDDTILVSVQHANNEIGT 153 (382)
T ss_dssp HGG---------GCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTT-SCBCHHHHHHHCCTTEEEEECCSBCTTTCB
T ss_pred ccC---------CCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCC-CccCHHHHHHHhcCCCeEEEEeccCCCccc
Confidence 100 147899999999998777764 5999999999864 899999999999888999999999999999
Q ss_pred cCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCc
Q 018437 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (356)
Q Consensus 218 ~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~ 297 (356)
+.|+++|.++|+++ +++ |+|++|+.+..+ .++...++|.++.|+||+ ++|.|+|+++++++..+.
T Consensus 154 ~~~l~~i~~l~~~~------~~~-i~D~a~~~g~~~-------~~~~~~~~di~~~s~sK~-~g~~g~G~~~~~~~~~l~ 218 (382)
T 4eb5_A 154 IQPVEEISEVLAGK------AAL-HIDATASVGQIE-------VDVEKIGADMLTISSNDI-YGPKGVGALWIRKEAKLQ 218 (382)
T ss_dssp BCCHHHHHHHHTTS------SEE-EEECTTTBTTBC-------CCHHHHTCSEEEEETGGG-TCCSSCEEEEEETTCCCC
T ss_pred cCCHHHHHHHHHHC------CCE-EEEcchhcCCcc-------cCccccCCCEEEeehHHh-cCCCceEEEEEccccccC
Confidence 99999999999999 999 999999853321 222212579999999998 578899999998653121
Q ss_pred cccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 298 DELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
. .+.++........++.+....+++..+++.+. ++++++.++..+++++|
T Consensus 219 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~-~~~~~~~~~~~~~~~~l 268 (382)
T 4eb5_A 219 P------VILGGGQENGLRSGSENVPSIVGFGKAAEITA-MEWREEAERLRRLRDRI 268 (382)
T ss_dssp C------SSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred c------eecCCCccccccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHH
Confidence 1 11111110111235555555666667776553 46777777777766655
No 20
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.94 E-value=9.8e-26 Score=216.71 Aligned_cols=231 Identities=15% Similarity=0.087 Sum_probs=178.4
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCe-EEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch--H
Q 018437 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVG-VGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC--W 167 (356)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~-~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s--~ 167 (356)
+...++.+++++++++++|.+. ... ++++||++++..++.++..+ +++|+++.++|++ +
T Consensus 40 ~~~~~~~~~l~~~la~~~g~~~-----~~~~~~~~s~t~al~~~~~~l~~~-------------gd~Vl~~~~~~~~~~~ 101 (416)
T 3isl_A 40 PAFTGIMNETMEMLRELFQTKN-----RWAYPIDGTSRAGIEAVLASVIEP-------------EDDVLIPIYGRFGYLL 101 (416)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCC-----SEEEEEESCHHHHHHHHHHHHCCT-------------TCEEEEEESSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCC-----CcEEEecCcHHHHHHHHHHHhcCC-------------CCEEEEecCCcccHHH
Confidence 3456778899999999999875 224 48889999999998877432 5799999999998 7
Q ss_pred HHHHHhhCCeeEEEEecCCccccCHHHHHHHHh-hCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecc
Q 018437 168 EKFARYFEVELKEVKLEEGYYVMNPVKAVELVD-ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (356)
Q Consensus 168 ~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~-~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a 246 (356)
...++..|++++.+|++++ +.+|+++|+++++ +++++|++++++||||.+.|+++|.++|+++ |+++|+|++
T Consensus 102 ~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~------~~~li~D~a 174 (416)
T 3isl_A 102 TEIAERYGANVHMLECEWG-TVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTE------DALFIVDAV 174 (416)
T ss_dssp HHHHHHTTCEEEEEECCTT-CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHHHHHHHT------TCEEEEECT
T ss_pred HHHHHhcCCeeEEEecCCC-CCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHHHHHHHc------CCEEEEECC
Confidence 7888999999999999875 8999999999998 5899999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccc----cCCC---------CCC---
Q 018437 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFH----INYL---------GSD--- 310 (356)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~----~~~~---------~~~--- 310 (356)
++.+..+ .++...++|.++.++|||+++|.|+|+++++++ .. +.+... ..|. ++.
T Consensus 175 ~~~~~~~-------~~~~~~~~d~~~~s~~K~l~g~~g~g~~~~~~~-~~-~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~ 245 (416)
T 3isl_A 175 ATIGGCE-------VKVDEWKIDAAIGGTQKCLSVPSGMAPITYNER-VA-DVIAARKKVERGIATQADRAALSGNRPIT 245 (416)
T ss_dssp TTTTTSC-------CCTTTTTCSEEECCSSSTTCCCSSEEEEEECHH-HH-HHHHTC------------------CCCCS
T ss_pred ccccCCC-------cchhhcCCCEEEecCccccCCCCCeEEEEECHH-HH-HHhhccccccccccccccchhccCCCCCC
Confidence 8754442 233334789999999999999999999998653 11 111000 0010 000
Q ss_pred -------------CCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 311 -------------QPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 311 -------------~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
.......+|.+....+++.+++..+...|++++.++..+++++|.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~ 303 (416)
T 3isl_A 246 SNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALA 303 (416)
T ss_dssp CSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred ccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 001112367777778888888988887788888888888777653
No 21
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.94 E-value=8.6e-25 Score=210.86 Aligned_cols=261 Identities=18% Similarity=0.104 Sum_probs=189.6
Q ss_pred cccccCCCChHHHHHHHHHHhc--ccCCCccc-----CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHH
Q 018437 60 LASFVTTWMEPECDKLVMASIN--KNYVDMDE-----YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (356)
Q Consensus 60 l~~~~~~~~~~~v~~~i~~~~~--~~~~~~~~-----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~ 132 (356)
|....++++++.+.+++.+.+. ....++.. .........++++++++++|+++ ..+++|+||++|+..
T Consensus 26 ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-----~~v~~~~ggt~a~~~ 100 (423)
T 3lvm_A 26 LDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADP-----REIVFTSGATESDNL 100 (423)
T ss_dssp CBTTTCCCCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCG-----GGEEEESSHHHHHHH
T ss_pred ecCCCcCCCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCC-----CeEEEeCChHHHHHH
Confidence 3333445667888999887776 33333222 22445677889999999999975 348999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhh---CCeeEEEEecCCccccCHHHHHHHHhhCceEEEEe
Q 018437 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYF---EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAI 209 (356)
Q Consensus 133 al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~---G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~ 209 (356)
++.++.+.+. ..+++|+++.++|+++...+..+ |++++.+|+++ ++.+|+++|++++++++++|+++
T Consensus 101 a~~~l~~~~~---------~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~v~~~ 170 (423)
T 3lvm_A 101 AIKGAANFYQ---------KKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR-NGIIDLKELEAAMRDDTILVSIM 170 (423)
T ss_dssp HHHHHHHHHT---------TTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT-TSCCCHHHHHHHCCTTEEEEECC
T ss_pred HHHHHHHhhc---------cCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCC-CCccCHHHHHHhcCCCcEEEEEe
Confidence 9998875321 11579999999999988887555 99999999987 48999999999999999999999
Q ss_pred cCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEE
Q 018437 210 LGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVV 289 (356)
Q Consensus 210 ~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~ 289 (356)
+++||||.+.|+++|.++|+++ |+++|+|++++.+..+ .++...++|.++.++||+ ++|.|+|+++
T Consensus 171 ~~~nptG~~~~l~~i~~l~~~~------~~~li~Dea~~~~~~~-------~~~~~~~~di~~~s~sK~-~g~~g~G~~~ 236 (423)
T 3lvm_A 171 HVNNEIGVVQDIAAIGEMCRAR------GIIYHVDATQSVGKLP-------IDLSQLKVDLMSFSGHKI-YGPKGIGALY 236 (423)
T ss_dssp SBCTTTCBBCCHHHHHHHHHHH------TCEEEEECTTTTTTSC-------CCTTTSCCSEEEEESTTT-TSCSSCEEEE
T ss_pred CCCCCCccccCHHHHHHHHHHc------CCEEEEEhhhhcCCCC-------cChhhcCCCEEEechHHh-cCCCCeEEEE
Confidence 9999999999999999999999 9999999999875442 223334689999999995 5788899999
Q ss_pred EeCCCCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 290 WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
++++.. ..+ ...+.++........++.+....+++.+++..+... ++++.++..+++++|
T Consensus 237 ~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l 296 (423)
T 3lvm_A 237 VRRKPR--VRI--EAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEE-MATEMERLRGLRNRL 296 (423)
T ss_dssp ECBTTB--CCC--CCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred Eecccc--CCC--CccccCCcccccccCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 875422 111 111111111111123566666666666777665433 666666666665554
No 22
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.93 E-value=2.3e-25 Score=213.12 Aligned_cols=259 Identities=18% Similarity=0.104 Sum_probs=184.6
Q ss_pred CCCChHHHHHHHHHHhcccCCCcc----cCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASINKNYVDMD----EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~~~~~~----~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~ 140 (356)
++++++.+.+++.+.+.....++. .......+.+++++++++++|+++ ..+++|+||++|+..++.++...
T Consensus 29 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-----~~v~~~~g~t~al~~~~~~l~~~ 103 (400)
T 3vax_A 29 TTRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEP-----DELIFTSGATESNNIALLGLAPY 103 (400)
T ss_dssp CSSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCG-----GGEEEESCHHHHHHHHHHTTHHH
T ss_pred CCCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCC-----CcEEEeCCHHHHHHHHHHHHHHh
Confidence 345567888888777653222221 122445677889999999999975 34899999999999999988622
Q ss_pred HHHHHHhcCCCCCCC-eEEecCCCcchHHHHHHh---hCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCccc
Q 018437 141 WQQKRKEQGKPYDKP-NIVTGANVQVCWEKFARY---FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (356)
Q Consensus 141 ~~~~~~~~g~~~~~~-~vi~s~~~h~s~~~~~~~---~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG 216 (356)
..+ + ++ +|+++.++|+++...+.. .|++++.+|++++ +.+|+++|++++++++++|++++++||||
T Consensus 104 ~~~----~-----gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~v~~~~~~nptG 173 (400)
T 3vax_A 104 GER----T-----GRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPS-GRISVEGVMERLRPDTLLVSLMHVNNETG 173 (400)
T ss_dssp HHH----H-----TCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTT-CCCCHHHHHTTCCTTEEEEECCSBCTTTC
T ss_pred hcc----C-----CCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCCC-CCcCHHHHHHhcCCCceEEEEECCCCCce
Confidence 111 1 57 899999999998776665 4999999999874 89999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEE-EeCCCC
Q 018437 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVV-WRTKDD 295 (356)
Q Consensus 217 ~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~-~~~~~~ 295 (356)
.+.|+++|.++|+++ |+++++|++|+.+..+ .++... +|.++.++||+ ++|.|+|+++ ++++..
T Consensus 174 ~~~~l~~i~~la~~~------~~~li~D~a~~~~~~~-------~~~~~~-~d~~~~s~~K~-~g~~g~g~~~~~~~~~~ 238 (400)
T 3vax_A 174 VIQPVAELAQQLRAT------PTYLHVDAAQGYGKVP-------GDLTTP-IDMISISGHKI-GAPKGVGALVTRRREEM 238 (400)
T ss_dssp BBCCHHHHHHHHTTS------SCEEEEECTTTTTTSG-------GGGGSC-CSEEEEETGGG-TSCSSCEEEEECBCSSS
T ss_pred eeCcHHHHHHHHHhc------CCEEEEEhhhhcCCCC-------cChhhc-CcEEEEeHHHh-CCCCceEEEEEecchhc
Confidence 999999999999999 9999999999864432 333333 89999999994 5788999999 887433
Q ss_pred CccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 296 LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
..........+.++........++.+....+++..+++.+ .++++++.++..+++++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l 296 (400)
T 3vax_A 239 DDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIF-EAEHAQWQVAAQDLRSRL 296 (400)
T ss_dssp TTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHH-HHSHHHHHHHHHHHHHHH
T ss_pred cccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHH
Confidence 2100001111111111111123555665566666666654 345677777776666654
No 23
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.93 E-value=2.5e-24 Score=204.39 Aligned_cols=254 Identities=17% Similarity=0.099 Sum_probs=182.0
Q ss_pred CCCChHHHHHHHHHHhcccCCCccc----CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASINKNYVDMDE----YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~~~~~~~----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~ 140 (356)
.+++++.+.+++.+.+.....++.. .........++++++++++|+++ ..+++|+||++|+..++.+++..
T Consensus 10 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~-----~~v~~~~g~t~a~~~~~~~~~~~ 84 (384)
T 1eg5_A 10 TTRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSP-----SEIFFTSCATESINWILKTVAET 84 (384)
T ss_dssp CCCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCG-----GGEEEESCHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCC-----CeEEEECCHHHHHHHHHHhhhhh
Confidence 3456688899888877643222211 12345666788999999999875 24899999999999999988631
Q ss_pred HHHHHHhcCCCCCCCeEEecCCCcchHHHHH---HhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccc
Q 018437 141 WQQKRKEQGKPYDKPNIVTGANVQVCWEKFA---RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (356)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~---~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~ 217 (356)
. ...+++|+++.++|+++...+ +..|++++.+|++++ +.+|+++|++++++++++|++++++||||.
T Consensus 85 ~---------~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~v~~~~~~nptG~ 154 (384)
T 1eg5_A 85 F---------EKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSR-GVVKLEELEKLVDEDTFLVSIMAANNEVGT 154 (384)
T ss_dssp T---------TTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTT-SCBCHHHHHHHCCTTEEEEEEESBCTTTCB
T ss_pred c---------cCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCC-CccCHHHHHHHhCCCCeEEEEECCCCCccc
Confidence 0 001578999999999887666 667999999999864 899999999999988999999999999999
Q ss_pred cCCHHHHHHHHHHhhhccCCC--CcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCC
Q 018437 218 FEDVKLLHDLLTKKNEETGWD--TPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (356)
Q Consensus 218 ~~~i~~I~~i~~~~~~~~~~~--~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~ 295 (356)
+.|+++|.++|+++ + +++|+|++|+.+.. ..++...++|.++.|+||+ ++|.|+|+++++++..
T Consensus 155 ~~~~~~i~~l~~~~------~~~~~li~Dea~~~~~~-------~~~~~~~~~di~~~s~sK~-~g~~G~G~~~~~~~~~ 220 (384)
T 1eg5_A 155 IQPVEDVTRIVKKK------NKETLVHVDAVQTIGKI-------PFSLEKLEVDYASFSAHKF-HGPKGVGITYIRKGVP 220 (384)
T ss_dssp BCCHHHHHHHHHHH------CTTCEEEEECTTTTTTS-------CCCCTTTCCSEEEEEGGGG-TSCTTCEEEEECTTSC
T ss_pred ccCHHHHHHHHHhc------CCceEEEEEhhhhcCCc-------ccCchhcCCCEEEecHHHh-cCCCceEEEEEcCCCc
Confidence 99999999999999 9 99999999873322 1223323689999999998 5788899999875421
Q ss_pred CccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 296 LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
+... +.+.........++.+....++++.+++.+ .++++++.++..+++++|
T Consensus 221 ~~~~------~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l 272 (384)
T 1eg5_A 221 IRPL------IHGGGQERGLRSGTQNVPGIVGAARAMEIA-VEELSEAAKHMEKLRSKL 272 (384)
T ss_dssp CCCS------BCSSCTTTTTBCSCCCHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHH
T ss_pred cccc------cccCcccccccCCCCChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHH
Confidence 1111 111111011123455565566666777664 345666666666666554
No 24
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.93 E-value=3.5e-25 Score=211.31 Aligned_cols=254 Identities=11% Similarity=-0.012 Sum_probs=185.3
Q ss_pred cccCCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHH
Q 018437 62 SFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (356)
Q Consensus 62 ~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~ 141 (356)
...+.++++.+.+++.+.+.. + .++.......++++++++++|.++ ..+++|+||++|+..++.++..+
T Consensus 14 ~~~~~~~~~~v~~a~~~~~~~---~--~~~~~~~~~~~l~~~la~~~g~~~-----~~v~~t~g~t~a~~~~~~~~~~~- 82 (392)
T 2z9v_A 14 TAGPVNAYPEVLRGLGRTVLY---D--YDPAFQLLYEKVVDKAQKAMRLSN-----KPVILHGEPVLGLEAAAASLISP- 82 (392)
T ss_dssp SSSCCCCCHHHHHHTTSCCCC---T--TSHHHHHHHHHHHHHHHHHTTCSS-----CCEEESSCTHHHHHHHHHHHCCT-
T ss_pred cCCCcCCCHHHHHHHhccccc---c--ccHHHHHHHHHHHHHHHHHhCCCC-----CEEEEeCCchHHHHHHHHHhcCC-
Confidence 334556667888887766542 1 233445667788999999999974 24899999999999999887432
Q ss_pred HHHHHhcCCCCCCCeEEecCCCcchH--HHHHHhhCCeeEEEEecCCccccCHHHHHHHHh--hCceEEEEecCCCcccc
Q 018437 142 QQKRKEQGKPYDKPNIVTGANVQVCW--EKFARYFEVELKEVKLEEGYYVMNPVKAVELVD--ENTICVAAILGSTLTGE 217 (356)
Q Consensus 142 ~~~~~~~g~~~~~~~vi~s~~~h~s~--~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~--~~~~~v~~~~~~~~tG~ 217 (356)
+++|+++.++|+++ ...++..|++++.+|++++ +.+|+++|+++++ +++++|++++++||||.
T Consensus 83 ------------gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~ 149 (392)
T 2z9v_A 83 ------------DDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPYN-EAIDPQAVADMLKAHPEITVVSVCHHDTPSGT 149 (392)
T ss_dssp ------------TCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCTT-SCCCHHHHHHHHHHCTTCCEEEEESEEGGGTE
T ss_pred ------------CCEEEEecCCcccHHHHHHHHHcCCceEEeeCCCC-CCCCHHHHHHHHhcCCCCcEEEEeccCCCCce
Confidence 46899999999875 3445567999999999875 7899999999995 47899999999999999
Q ss_pred cCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCc
Q 018437 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (356)
Q Consensus 218 ~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~ 297 (356)
+.|+++|.++|+++ |+++|+|++|+.+..+ .++...++|.++.|+||++++|.|+|+++++++ ..
T Consensus 150 ~~~l~~i~~l~~~~------~~~li~D~a~~~g~~~-------~~~~~~~~d~~~~s~sK~~~~~~g~G~l~~~~~-~~- 214 (392)
T 2z9v_A 150 INPIDAIGALVSAH------GAYLIVDAVSSFGGMK-------THPEDCKADIYVTGPNKCLGAPPGLTMMGVSER-AW- 214 (392)
T ss_dssp ECCHHHHHHHHHHT------TCEEEEECTTTBTTBS-------CCGGGGTCSEEEECSSSTTCCCSCCEEEEECHH-HH-
T ss_pred eccHHHHHHHHHHc------CCeEEEEcccccCCcc-------cccccccceEEEecCcccccCCCceeEEEECHH-HH-
Confidence 99999999999999 9999999999854332 222223689999999999999999999998643 21
Q ss_pred ccccc-c--c--CCCC------CCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 298 DELVF-H--I--NYLG------SDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 298 ~~~~~-~--~--~~~~------~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
+.+.. . . .+.+ +........++.+....+++..+++.+...|++++.++..+++++|
T Consensus 215 ~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l 282 (392)
T 2z9v_A 215 AKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAM 282 (392)
T ss_dssp HHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred HHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 11110 0 0 0110 0001112246666666677778888776666777777777766654
No 25
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.93 E-value=4.3e-25 Score=210.78 Aligned_cols=252 Identities=12% Similarity=0.026 Sum_probs=183.6
Q ss_pred CCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (356)
+.++++.+.+++.+.+..+ + .+.......++++++++++|++.+ ..+++|+||++|+..++.++.++
T Consensus 27 ~~~~~~~v~~a~~~~~~~~---~--~~~~~~~~~~l~~~la~~~g~~~~----~~i~~~~g~t~a~~~~~~~~~~~---- 93 (393)
T 2huf_A 27 PSNAPQRVLDAMSRPILGH---L--HPETLKIMDDIKEGVRYLFQTNNI----ATFCLSASGHGGMEATLCNLLED---- 93 (393)
T ss_dssp CCCCCHHHHHHTTSCCCCT---T--SHHHHHHHHHHHHHHHHHHTCCCS----EEEEESSCHHHHHHHHHHHHCCT----
T ss_pred CCCCCHHHHHHHHhhhccC---C--CHHHHHHHHHHHHHHHHHhCCCCC----cEEEEcCcHHHHHHHHHHHHhCC----
Confidence 3445677888776655421 2 234456777899999999999752 14789999999999999887432
Q ss_pred HHhcCCCCCCCeEEecCCCcchH--HHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh-CceEEEEecCCCcccccCCH
Q 018437 145 RKEQGKPYDKPNIVTGANVQVCW--EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDV 221 (356)
Q Consensus 145 ~~~~g~~~~~~~vi~s~~~h~s~--~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~i 221 (356)
+++|+++.++|+++ ...++..|++++.+|++++ +.+|+++|++++++ ++++|++++++||||.+.|+
T Consensus 94 ---------gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l 163 (393)
T 2huf_A 94 ---------GDVILIGHTGHWGDRSADMATRYGADVRVVKSKVG-QSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGL 163 (393)
T ss_dssp ---------TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTT-CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCC
T ss_pred ---------CCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCCC-CCCCHHHHHHHHhccCCcEEEEEccCCCccccCCH
Confidence 46899999999884 3445667999999999874 79999999999988 89999999999999999999
Q ss_pred HHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccc
Q 018437 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELV 301 (356)
Q Consensus 222 ~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~ 301 (356)
++|.++|+++ ++++|+|++++.+..+ .++...++|.++.++||++++|.|+|+++++++ .. +.+.
T Consensus 164 ~~i~~~~~~~------~~~li~D~a~~~~~~~-------~~~~~~~~d~~~~s~sK~l~g~~G~G~~~~~~~-~~-~~~~ 228 (393)
T 2huf_A 164 EGVGALCHQH------NCLLIVDTVASLGGAP-------MFMDRWEIDAMYTGSQKVLGAPPGITPVSFSHR-AV-ERYK 228 (393)
T ss_dssp TTHHHHHHHT------TCEEEEECTTTBTTBC-------CCTTTTTCSEEECCSSSTTCCCSSCEEEEECHH-HH-HHHH
T ss_pred HHHHHHHHHc------CCEEEEEcccccCCCC-------cchhhcCccEEEECCCcccccCCCeEEEEECHH-HH-HHHh
Confidence 9999999999 9999999998754331 223333689999999999989999999998632 21 1111
Q ss_pred cc----cCC----------CCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 302 FH----INY----------LGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 302 ~~----~~~----------~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
.. .+| .++........++.+....+++.++++.+..+|++++.++..+++++|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 295 (393)
T 2huf_A 229 RRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRL 295 (393)
T ss_dssp TCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred hcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 00 111 111111111235666766777777888776666777777776666654
No 26
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.93 E-value=9.4e-25 Score=207.62 Aligned_cols=253 Identities=11% Similarity=-0.023 Sum_probs=185.9
Q ss_pred cCCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHH
Q 018437 64 VTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (356)
Q Consensus 64 ~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (356)
.+.+.++.+.+++.+.+.. ++ ++....+.+++++++++++|++. . ..+++|+||++|+..++.++.++
T Consensus 27 ~~~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~~~~~la~~~g~~~-~---~~v~~~~g~t~a~~~~~~~l~~~--- 94 (386)
T 2dr1_A 27 GPVACFPEVLEIMKVQMFS---HR--SKEYRKVHMDTVERLREFLEVEK-G---EVLLVPSSGTGIMEASIRNGVSK--- 94 (386)
T ss_dssp SSCCCCHHHHHHTTSCCCC---TT--SHHHHHHHHHHHHHHHHHHTCSS-S---EEEEESSCHHHHHHHHHHHHSCT---
T ss_pred CCcCCcHHHHHHHhccccc---cc--CHHHHHHHHHHHHHHHHHhCCCC-C---cEEEEeCChHHHHHHHHHHhhcC---
Confidence 3445567777777655432 22 23457888899999999999971 1 34789999999999999887432
Q ss_pred HHHhcCCCCCCCeEEecCCCcch--HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHh--hCceEEEEecCCCcccccC
Q 018437 144 KRKEQGKPYDKPNIVTGANVQVC--WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD--ENTICVAAILGSTLTGEFE 219 (356)
Q Consensus 144 ~~~~~g~~~~~~~vi~s~~~h~s--~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~--~~~~~v~~~~~~~~tG~~~ 219 (356)
+++|+++.++|++ +...++..|++++.+|++++ +.+|+++|+++++ +++++|++++++||||.+.
T Consensus 95 ----------gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~ 163 (386)
T 2dr1_A 95 ----------GGKVLVTIIGAFGKRYKEVVESNGRKAVVLEYEPG-KAVKPEDLDDALRKNPDVEAVTITYNETSTGVLN 163 (386)
T ss_dssp ----------TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTT-CCCCHHHHHHHHHHCTTCCEEEEESEETTTTEEC
T ss_pred ----------CCeEEEEcCCchhHHHHHHHHHhCCceEEEecCCC-CCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhC
Confidence 5789999999998 88889999999999999874 8999999999994 5789999999999999999
Q ss_pred CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccc
Q 018437 220 DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDE 299 (356)
Q Consensus 220 ~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~ 299 (356)
|+++|.++|+++ |+++|+|++|+.+..+ .++...++|.++.|+||++++|.|+|+++++++ .. +.
T Consensus 164 ~l~~i~~l~~~~------~~~li~D~a~~~~~~~-------~~~~~~~~di~~~s~sK~~~~~~g~G~~~~~~~-~~-~~ 228 (386)
T 2dr1_A 164 PLPELAKVAKEH------DKLVFVDAVSAMGGAD-------IKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSER-FL-EI 228 (386)
T ss_dssp CHHHHHHHHHHT------TCEEEEECTTTBTTBC-------CCTTTTTCSEEEEETTSTTCCCSSCEEEEECHH-HH-HH
T ss_pred CHHHHHHHHHHc------CCeEEEEccccccCcc-------ccccccCCcEEEEeccccccCCCceEEEEECHH-HH-HH
Confidence 999999999999 9999999999876542 222233689999999999988888999998653 21 11
Q ss_pred ccc--ccCCCCC------CCC-CccccCCCChhHHHHHHHHHHHhCHH-HHHHHHHHHHhccCcc
Q 018437 300 LVF--HINYLGS------DQP-TFTLNFSKGSSQIIAQYYQFIRLGFE-EITFTFISSLKVCPFL 354 (356)
Q Consensus 300 ~~~--~~~~~~~------~~~-~~~~~~tr~~~~~~~~~~~l~~lg~~-G~~~~~~~~~~~a~~l 354 (356)
+.. ...|... ... .....++.+....+++..+++.+... |++++.++..+++++|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l 293 (386)
T 2dr1_A 229 AEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMV 293 (386)
T ss_dssp HTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 100 0001000 000 00112456665667777888876555 5777777776666654
No 27
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.93 E-value=7.5e-25 Score=209.27 Aligned_cols=253 Identities=11% Similarity=0.005 Sum_probs=189.1
Q ss_pred cCCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHH
Q 018437 64 VTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (356)
Q Consensus 64 ~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (356)
.+.++++.+.+++.+.+.. ++ .+....+.+++++++++++|++++ ..+++|+||++|+..++.++.++
T Consensus 41 ~~~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~~~~~la~~~g~~~~----~~v~~t~g~t~al~~~~~~~~~~--- 108 (393)
T 1vjo_A 41 GPSNAHPSVLQAMNVSPVG---HL--DPAFLALMDEIQSLLRYVWQTENP----LTIAVSGTGTAAMEATIANAVEP--- 108 (393)
T ss_dssp SCCCCCHHHHHHHSSCCCC---TT--SHHHHHHHHHHHHHHHHHHTCCCS----CEEEESSCHHHHHHHHHHHHCCT---
T ss_pred CCCCCCHHHHHHHhccccc---cc--CHHHHHHHHHHHHHHHHHhCCCCC----cEEEEeCchHHHHHHHHHhccCC---
Confidence 3445567888888766542 22 223567888999999999999752 14899999999999999887432
Q ss_pred HHHhcCCCCCCCeEEecCCCcch--HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh-CceEEEEecCCCcccccCC
Q 018437 144 KRKEQGKPYDKPNIVTGANVQVC--WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFED 220 (356)
Q Consensus 144 ~~~~~g~~~~~~~vi~s~~~h~s--~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~ 220 (356)
+++|+++.++|++ +...++..|++++.+|++++ +.+|+++|++++++ ++++|++++++||||.+.|
T Consensus 109 ----------gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~ 177 (393)
T 1vjo_A 109 ----------GDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPWG-EVFSLEELRTALETHRPAILALVHAETSTGARQP 177 (393)
T ss_dssp ----------TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTT-CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC
T ss_pred ----------CCEEEEEcCChhHHHHHHHHHHcCCceEEEecCCC-CCCCHHHHHHHHhhCCceEEEEeccCCCcceecc
Confidence 5689999999999 99999999999999999874 89999999999998 8999999999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCcccc
Q 018437 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDEL 300 (356)
Q Consensus 221 i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~ 300 (356)
+++|.++|+++ |+++|+|++|+.+.. +.++...++|.++.++||++++|.++|+++++++ .. +.+
T Consensus 178 l~~i~~l~~~~------~~~li~Dea~~~g~~-------~~~~~~~~~di~~~s~sK~l~~~~~~G~l~~~~~-~~-~~~ 242 (393)
T 1vjo_A 178 LEGVGELCREF------GTLLLVDTVTSLGGV-------PIFLDAWGVDLAYSCSQKGLGCSPGASPFTMSSR-AI-EKL 242 (393)
T ss_dssp CTTHHHHHHHH------TCEEEEECTTTTTTS-------CCCTTTTTCSEEECCSSSTTCSCSSCEEEEECHH-HH-HHH
T ss_pred HHHHHHHHHHc------CCEEEEECCccccCc-------CCcccccCccEEEEcCcccccCCCceEEEEECHH-HH-HHH
Confidence 99999999999 999999999984322 1233334789999999999999999999998653 21 111
Q ss_pred ccc----cCCCCCC-------CCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 301 VFH----INYLGSD-------QPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 301 ~~~----~~~~~~~-------~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
... ..+..+. .......++.+....+++..+++.+..++++++.++..+++++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 307 (393)
T 1vjo_A 243 QRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYL 307 (393)
T ss_dssp HTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred hccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 000 0111100 00001113666666777788888776666777777777766655
No 28
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.93 E-value=4.3e-26 Score=213.95 Aligned_cols=251 Identities=12% Similarity=0.062 Sum_probs=184.2
Q ss_pred CCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (356)
+.++++.+.+++.+.+.. + .++.......++++++++++|.+.+ ...+++|+||++|+..++.++.
T Consensus 8 p~~~~~~v~~a~~~~~~~---~--~~~~~~~~~~~l~~~la~~~g~~~~---~~~v~~t~g~t~a~~~~~~~~~------ 73 (353)
T 2yrr_A 8 PTPIPERVQKALLRPMRG---H--LDPEVLRVNRAIQERLAALFDPGEG---ALVAALAGSGSLGMEAGLANLD------ 73 (353)
T ss_dssp SCCCCHHHHGGGGSCCCC---T--TCHHHHHHHHHHHHHHHHHHCCCTT---CEEEEESSCHHHHHHHHHHTCS------
T ss_pred CCCCCHHHHHHHhccccc---c--cCHHHHHHHHHHHHHHHHHhCCCCC---CceEEEcCCcHHHHHHHHHHhc------
Confidence 445567888887766543 1 2445567788999999999999621 1348899999999999887652
Q ss_pred HHhcCCCCCCCeEEecCCCcchH--HHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh-CceEEEEecCCCcccccCCH
Q 018437 145 RKEQGKPYDKPNIVTGANVQVCW--EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDV 221 (356)
Q Consensus 145 ~~~~g~~~~~~~vi~s~~~h~s~--~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~i 221 (356)
+++|+++.++|+++ ...++..|++++.+|++++ +.+|+++|++++++ ++++|++++++||||.+.|+
T Consensus 74 ---------~d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~ 143 (353)
T 2yrr_A 74 ---------RGPVLVLVNGAFSQRVAEMAALHGLDPEVLDFPPG-EPVDPEAVARALKRRRYRMVALVHGETSTGVLNPA 143 (353)
T ss_dssp ---------CCCEEEEECSHHHHHHHHHHHHTTCCEEEEECCTT-SCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCH
T ss_pred ---------CCcEEEEcCCCchHHHHHHHHHcCCceEEEeCCCC-CCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCH
Confidence 15799999999884 5666788999999999874 89999999999998 89999999999999999999
Q ss_pred HHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccc
Q 018437 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELV 301 (356)
Q Consensus 222 ~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~ 301 (356)
++|.++|+++ |+++|+|++|+.+..+ .++...++|.+++++|||+++|.|+|+++++++ .. +.+.
T Consensus 144 ~~i~~l~~~~------~~~li~D~a~~~~~~~-------~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~-~~-~~l~ 208 (353)
T 2yrr_A 144 EAIGALAKEA------GALFFLDAVTTLGMLP-------FSMRAMGVDYAFTGSQKCLSAPPGLAPIAASLE-AR-KAFT 208 (353)
T ss_dssp HHHHHHHHHH------TCEEEEECTTTTTTSC-------CCHHHHTCSEEECCTTSTTCCCSSCEEEEECHH-HH-HHCC
T ss_pred HHHHHHHHHc------CCeEEEEcCccccccc-------ccccccCceEEEecCcccccCCCceEEEEECHH-HH-HHhc
Confidence 9999999999 9999999999743321 222222579999999999999999999998653 21 1111
Q ss_pred cccCC-CC-----CCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 302 FHINY-LG-----SDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 302 ~~~~~-~~-----~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
....+ .. .........++.+....+++.++++.+...|++++.++..+++++|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 267 (353)
T 2yrr_A 209 GKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWV 267 (353)
T ss_dssp CCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred cCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 00101 00 0000011235666666677778888877777877777777776665
No 29
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.93 E-value=5.8e-25 Score=209.41 Aligned_cols=253 Identities=11% Similarity=0.037 Sum_probs=186.8
Q ss_pred cCCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHH
Q 018437 64 VTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (356)
Q Consensus 64 ~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (356)
.|..+++.+.+++.+... .+ .++.......++++++++++|.+.. ..+++|+||++|+..++.++.++
T Consensus 30 ~p~~~~~~v~~a~~~~~~---~~--~~~~~~~~~~~l~~~la~~~~~~~~----~~v~~~~gg~~al~~~~~~~~~~--- 97 (393)
T 3kgw_A 30 GPSNLAPRVLAAGSLRMI---GH--MQKEMLQIMEEIKQGIQYVFQTRNP----LTLVVSGSGHCAMETALFNLLEP--- 97 (393)
T ss_dssp SCCCCCHHHHHHTTCCCC---CT--TSHHHHHHHHHHHHHHHHHHTCCCS----EEEEESCCTTTHHHHHHHHHCCT---
T ss_pred CCCCCCHHHHHHhccccc---Cc--ccHHHHHHHHHHHHHHHHHhCCCCC----cEEEEeCCcHHHHHHHHHhcCCC---
Confidence 344456777777654321 11 2344567778899999999999741 24789999999999999887432
Q ss_pred HHHhcCCCCCCCeEEecCCCcch--HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh-CceEEEEecCCCcccccCC
Q 018437 144 KRKEQGKPYDKPNIVTGANVQVC--WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFED 220 (356)
Q Consensus 144 ~~~~~g~~~~~~~vi~s~~~h~s--~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~ 220 (356)
+++|+++.++|++ +...++..|++++.+|++++ +.+|+++|++++++ ++++|++++++||||.+.|
T Consensus 98 ----------gd~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~ 166 (393)
T 3kgw_A 98 ----------GDSFLTGTNGIWGMRAAEIADRIGARVHQMIKKPG-EHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQP 166 (393)
T ss_dssp ----------TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTT-CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC
T ss_pred ----------CCEEEEEeCCchhHHHHHHHHHcCCceEEEeCCCC-CCCCHHHHHHHHhhCCCcEEEEeccCCcchhhcc
Confidence 5789998888863 47788888999999999875 79999999999998 8999999999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCcccc
Q 018437 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDEL 300 (356)
Q Consensus 221 i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~ 300 (356)
+++|.++|+++ |+++|+|++++.+..+ .++...++|.++.++||++++|.|+|+++++++ .. +.+
T Consensus 167 l~~i~~l~~~~------~~~li~De~~~~g~~~-------~~~~~~~~d~~~~s~sK~~~~~~g~g~~~~~~~-~~-~~~ 231 (393)
T 3kgw_A 167 LDGFGELCHRY------QCLLLVDSVASLGGVP-------IYMDQQGIDIMYSSSQKVLNAPPGISLISFNDK-AK-YKV 231 (393)
T ss_dssp CTTHHHHHHHT------TCEEEEECTTTTTTSC-------CCTTTTTCCEEEEESSSTTCCCSSCEEEEECHH-HH-HHH
T ss_pred HHHHHHHHHHc------CCEEEEECCccccCcc-------cchhhcCCCEEEecCcccccCCCceeEEEECHH-HH-HHH
Confidence 99999999999 9999999998744332 223334689999999999999999999998643 11 111
Q ss_pred cc-cc-------------CCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 301 VF-HI-------------NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 301 ~~-~~-------------~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
.. .. .+.++........++.+....+++.+++..+..+|++++.++..+++++|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 299 (393)
T 3kgw_A 232 YSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHL 299 (393)
T ss_dssp HTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred hccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 00 00 01111111112235666776778888888887778888888877777665
No 30
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.93 E-value=3.9e-25 Score=209.98 Aligned_cols=252 Identities=16% Similarity=0.040 Sum_probs=187.6
Q ss_pred CCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (356)
+.++++.+.+++.+.+..+ .++....+.+++++++++++|++.+. ..+++|+||++|+. ++.++..+
T Consensus 10 p~~~~~~v~~a~~~~~~~~-----~~~~~~~~~~~~~~~la~~~~~~~~~---~~v~~~~g~t~al~-~~~~~~~~---- 76 (384)
T 3zrp_A 10 PTTIKEDVLVAGLENNVGF-----TSKEFVEALAYSLKGLRYVMGASKNY---QPLIIPGGGTSAME-SVTSLLKP---- 76 (384)
T ss_dssp CSCCCHHHHHHTTCCSCCT-----TSHHHHHHHHHHHHHHHHHHTCCTTS---EEEEEESCHHHHHH-HGGGGCCT----
T ss_pred CCCCCHHHHHHhhcccccc-----ccHHHHHHHHHHHHHHHHHhCCCCCC---cEEEEcCCcHHHHH-HHHhhcCC----
Confidence 4455677777776554321 23455677889999999999998521 34899999999999 88765332
Q ss_pred HHhcCCCCCCCeEEecCCCcch--HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh-CceEEEEecCCCcccccCCH
Q 018437 145 RKEQGKPYDKPNIVTGANVQVC--WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDV 221 (356)
Q Consensus 145 ~~~~g~~~~~~~vi~s~~~h~s--~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~i 221 (356)
+++|+++.++|++ +...++..|++++.+|++++ +.+|+++|++++++ ++++|++++++||+|.+.|+
T Consensus 77 ---------gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l 146 (384)
T 3zrp_A 77 ---------NDKILVVSNGVFGDRWEQIFKRYPVNVKVLRPSPG-DYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPV 146 (384)
T ss_dssp ---------TCEEEEECSSHHHHHHHHHHTTSSCEEEEECCSTT-CCCCHHHHHHHHHHSCEEEEEEESEETTTTEECCH
T ss_pred ---------CCEEEEecCCcchHHHHHHHHHcCCcEEEecCCCC-CCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcH
Confidence 5789999999976 66777888999999999874 89999999999998 89999999999999999999
Q ss_pred HHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCcccc-
Q 018437 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDEL- 300 (356)
Q Consensus 222 ~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~- 300 (356)
++|.++|+++ |+++|+|++++.+..+ .++...++|.++.++||++++|.|+|+++++++ .. +.+
T Consensus 147 ~~i~~l~~~~------~~~li~D~a~~~~~~~-------~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~-~~-~~~~ 211 (384)
T 3zrp_A 147 KDVINKIRKY------VELIVVDGVSSVGAEE-------VKAEEWNVDVYLTASQKALGSAAGLGLLLLSPK-AL-SILD 211 (384)
T ss_dssp HHHHHHHGGG------EEEEEEECTTTTTTSC-------CCTTTTTCSEEEEETTSTTCCCSSEEEEEECHH-HH-HHHH
T ss_pred HHHHHHHHhc------CCEEEEECcccccCcc-------ccccccCCCEEEecCcccccCCCceEEEEECHH-HH-HHhc
Confidence 9999999999 9999999999865442 233334689999999999989999999998653 21 111
Q ss_pred cc--ccCCCCCCC------C-----CccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 301 VF--HINYLGSDQ------P-----TFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 301 ~~--~~~~~~~~~------~-----~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
.. ...|..... . .....|+.+....+++.+++..+...|++++.++..+++++|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 278 (384)
T 3zrp_A 212 SQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAI 278 (384)
T ss_dssp HCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 00 001100000 0 000114667777788888888887778888888888777665
No 31
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.92 E-value=5.2e-24 Score=207.17 Aligned_cols=302 Identities=13% Similarity=0.031 Sum_probs=198.1
Q ss_pred ccccccccchhhhhcCCCCCCCCCCCCHHHHHHHHHHHhhhcCC-CCcccccccCCC-ChHHHHHHH--HHHhcc-cCCC
Q 018437 12 EILSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGN-PRLNLASFVTTW-MEPECDKLV--MASINK-NYVD 86 (356)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~i~~~~~~~~~~~~~-~~~~l~~~~~~~-~~~~v~~~i--~~~~~~-~~~~ 86 (356)
++|+++|...|..-.+....+| .++++.++++++......+.. ....++.+.+.. .++.+.+++ ...+.. +++.
T Consensus 21 ~~~~~~~~~~p~~~~~~~~~lp-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~p~~v~~~~~~~~~~~~~~~~~ 99 (438)
T 1wyu_A 21 ASLEDLFAHLPKEILSPPIDLP-EPLPEWKVLEELRRLAAQNLPAHKAFLGGGVRSHHVPPVVQALAARGEFLTAYTPYQ 99 (438)
T ss_dssp SSTGGGGTTSCGGGSSCCCCCC-CCCCHHHHHHHHHHHHHTSCCCTTCCCCSSCCCCCCCHHHHHHHTSHHHHHCCSCCS
T ss_pred CCHHHHHHhCcHHHhcCCCCCC-CCCCHHHHHHHHHHHHhcCcCccccccCCCccCCcCcHHHHHHHhcchhhhcCCCCc
Confidence 4788999887775554455788 789999999988776554322 222233333322 334554444 333332 3333
Q ss_pred cccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch
Q 018437 87 MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC 166 (356)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s 166 (356)
+..+++..++++++++++++++|++. ..+++++|+|.++..++.+++-. .+++|+++.++|++
T Consensus 100 ~~~~~g~~~~~~~~~~~la~~~g~~~-----~~i~~~~g~taa~ea~~~a~~~~------------~gd~Viv~~~~h~s 162 (438)
T 1wyu_A 100 PEVSQGVLQATFEYQTMIAELAGLEI-----ANASMYDGATALAEGVLLALRET------------GRMGVLVSQGVHPE 162 (438)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHTSSE-----ECSCBSSHHHHHHHHHHHHHHHH------------TCCEEEEETTSCHH
T ss_pred chhhhhHHHHHHHHHHHHHHHhCCCc-----cceEEeCcHHHHHHHHHHHHhcC------------CCCEEEEcCccCHh
Confidence 44577889999999999999999975 23679999994433333332211 15799999999999
Q ss_pred HHHHH----HhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEE
Q 018437 167 WEKFA----RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIH 242 (356)
Q Consensus 167 ~~~~~----~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~ 242 (356)
+...+ +..|++++.||++ ++.+|+++ ++++|++|++++| |++|.+.|+++|.++|+++ |+|+|
T Consensus 163 ~~~~~~~~a~~~G~~v~~v~~~--~~~~d~~~----i~~~t~~v~i~~p-n~tG~~~~l~~i~~la~~~------g~~vi 229 (438)
T 1wyu_A 163 YRAVLRAYLEAVGAKLLTLPLE--GGRTPLPE----VGEEVGAVVVQNP-NFLGALEDLGPFAEAAHGA------GALFV 229 (438)
T ss_dssp HHHHHHHHHHHTTCEEEEECCB--TTBCCCCC----CCTTEEEEEEESS-CTTSBCCCHHHHHHHHHHT------TCEEE
T ss_pred HHHHHHHHHHHCCCEEEEEcCc--CCccCHHH----hCCCeEEEEEECC-CCCeEEecHHHHHHHHHHc------CCEEE
Confidence 87555 4579999999983 37888776 6778999999998 9999999999999999999 99999
Q ss_pred Eecc-cccccccccCCCCcccccCCCceEEEEcCCc-----CCCCCcCeeEEEEeCCCCCccccccc-----cCCCCCCC
Q 018437 243 VDAA-SGGFIAPFLYPDLEWDFRLPLVKSINVSGHK-----YGLVYAGVGWVVWRTKDDLPDELVFH-----INYLGSDQ 311 (356)
Q Consensus 243 vD~a-~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK-----~l~~P~g~g~l~~~~~~~~~~~~~~~-----~~~~~~~~ 311 (356)
+|.. ++.+..+ . + ...++|++++|+|| |+++| ++|+++++++ .. +.+... ..+.+...
T Consensus 230 vd~d~~a~g~~~--~---~---~~~g~D~~~~s~kk~~~~~~~~Gp-~~G~l~~~~~-~~-~~l~~~~~g~~~~~~~~~~ 298 (438)
T 1wyu_A 230 AVADPLSLGVLK--P---P---GAYGADIAVGDGQSLGLPMGFGGP-HFGFLATKKA-FV-RQLPGRLVSETVDVEGRRG 298 (438)
T ss_dssp EECCTTGGGTBC--C---H---HHHTCSEEEEECTTTTCCCGGGCS-CCEEEEECGG-GG-GGCCSCCEEEEEBTTSCEE
T ss_pred EEechhhccCcC--C---C---ccCCCCEEEECCcccCCCccCCCC-CeeEEEEcHH-HH-HhCCCceeccccccCCCcc
Confidence 7644 3211111 0 1 12368999999888 66778 9999998753 22 221100 00000000
Q ss_pred --------CC--ccccCCCCh---hHHHHH--HHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 312 --------PT--FTLNFSKGS---SQIIAQ--YYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 312 --------~~--~~~~~tr~~---~~~~~~--~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
.. ....++.+. ...+++ +.++..++.+|++++.++..++++||.
T Consensus 299 ~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~ 357 (438)
T 1wyu_A 299 FILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLH 357 (438)
T ss_dssp EEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 00 000123322 223333 445888999999999999988888764
No 32
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.92 E-value=2.7e-24 Score=206.72 Aligned_cols=265 Identities=18% Similarity=0.122 Sum_probs=187.7
Q ss_pred cccccccCCCChHHHHHHHHHHhcccCCCcc----cCc-chHHHHHHHHHHHHHHhCC-CCCCCCCCCeEEeCChhHHHH
Q 018437 58 LNLASFVTTWMEPECDKLVMASINKNYVDMD----EYP-VTTELQNRCVNMIAHLFNT-PVADDKTAVGVGTVGSSEAIM 131 (356)
Q Consensus 58 ~~l~~~~~~~~~~~v~~~i~~~~~~~~~~~~----~~~-~~~~le~~~~~~la~l~g~-~~~~~~~~~~~~t~Ggt~a~~ 131 (356)
.+|....+++.++.+.+++.+.+.....++. .++ .......++++.+++++|. ++ ..+++|+||++|+.
T Consensus 30 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~-----~~v~~~~g~t~a~~ 104 (420)
T 1t3i_A 30 VYLDNAATSQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSP-----REIVYTRNATEAIN 104 (420)
T ss_dssp EECBTTTCCCCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCG-----GGEEEESSHHHHHH
T ss_pred EEecCCccCCCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCC-----CeEEEcCChHHHHH
Confidence 3455555556668888888877754221111 111 1245566788899999998 43 34899999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEE
Q 018437 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVA 207 (356)
Q Consensus 132 ~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~ 207 (356)
.++.++++.. -..+++|+++.++|++ +...++..|++++.+|+++ ++.+|+++|++++++++++|+
T Consensus 105 ~~~~~~~~~~---------~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~v~ 174 (420)
T 1t3i_A 105 LVAYSWGMNN---------LKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDE-QESFDLEHFKTLLSEKTKLVT 174 (420)
T ss_dssp HHHHHTHHHH---------CCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCT-TSSBCHHHHHHHCCTTEEEEE
T ss_pred HHHHHhhhcc---------cCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCC-CCCcCHHHHHHhhCCCceEEE
Confidence 9999874210 0114689999999998 6777888899999999986 489999999999998999999
Q ss_pred EecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeE
Q 018437 208 AILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGW 287 (356)
Q Consensus 208 ~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~ 287 (356)
+++++||+|.+.|+++|.++|+++ |+++|+|++|+.+..+ .++...++|.++.|+|| +++|.|+|+
T Consensus 175 ~~~~~nptG~~~~l~~i~~l~~~~------~~~li~D~a~~~~~~~-------~~~~~~~~di~~~s~sK-~~~~~g~G~ 240 (420)
T 1t3i_A 175 VVHISNTLGCVNPAEEIAQLAHQA------GAKVLVDACQSAPHYP-------LDVQLIDCDWLVASGHK-MCAPTGIGF 240 (420)
T ss_dssp EESBCTTTCBBCCHHHHHHHHHHT------TCEEEEECTTTTTTSC-------CCHHHHTCSEEEEEGGG-TTSCTTCEE
T ss_pred EeCCcccccCcCCHHHHHHHHHHc------CCEEEEEhhhccCCcc-------CchhhcCCCEEEEehhh-hcCCCceEE
Confidence 999999999999999999999999 9999999999865432 12222258999999999 557888999
Q ss_pred EEEeCCCCCccccccccCCCCCC------------CCCccc-cCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 288 VVWRTKDDLPDELVFHINYLGSD------------QPTFTL-NFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 288 l~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~-~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
++.+++ .. +.+.. ....++. .....+ .++.+....+++..+++.+...|++++.++..++++++
T Consensus 241 ~~~~~~-~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 317 (420)
T 1t3i_A 241 LYGKEE-IL-EAMPP-FFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYL 317 (420)
T ss_dssp EEECHH-HH-HHSCC-CSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred EEEchH-HH-hhcCc-eecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 988642 21 11110 0000000 000011 25666666677776788776667777777777666654
No 33
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.92 E-value=4.2e-24 Score=204.15 Aligned_cols=251 Identities=10% Similarity=0.071 Sum_probs=182.0
Q ss_pred CCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHH
Q 018437 66 TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (356)
Q Consensus 66 ~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (356)
.++++.+.+++.+.+.. ++ ++.......++++.+++++|.+++ ..+++|+||++++..++.++.++
T Consensus 27 ~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~l~~~la~~~~~~~~----~~v~~~~g~t~al~~~~~~~~~~----- 92 (396)
T 2ch1_A 27 SNCSKRVLTAMTNTVLS---NF--HAELFRTMDEVKDGLRYIFQTENR----ATMCVSGSAHAGMEAMLSNLLEE----- 92 (396)
T ss_dssp CCCCHHHHHHTTSCCCC---TT--CHHHHHHHHHHHHHHHHHHTCCCS----CEEEESSCHHHHHHHHHHHHCCT-----
T ss_pred CCCCHHHHHHhcccccc---CC--ChhHHHHHHHHHHHHHHHhCCCCC----cEEEECCcHHHHHHHHHHHhcCC-----
Confidence 34456777776554432 12 233345567888999999999752 14789999999999999887432
Q ss_pred HhcCCCCCCCeEEecCCCcchHH--HHHHhhCCeeEEEEecCCccccCHHHHHHHHhh-CceEEEEecCCCcccccCCHH
Q 018437 146 KEQGKPYDKPNIVTGANVQVCWE--KFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVK 222 (356)
Q Consensus 146 ~~~g~~~~~~~vi~s~~~h~s~~--~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~i~ 222 (356)
+++|+++.++|+++. ..++..|++++.+|++++ +.+|+++|++++++ ++++|++++++||||.+.|++
T Consensus 93 --------gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~ 163 (396)
T 2ch1_A 93 --------GDRVLIAVNGIWAERAVEMSERYGADVRTIEGPPD-RPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLE 163 (396)
T ss_dssp --------TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTT-SCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCT
T ss_pred --------CCeEEEEcCCcccHHHHHHHHHcCCceEEecCCCC-CCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCHH
Confidence 578999999999984 477888999999999864 89999999999988 899999999999999999999
Q ss_pred HHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCcccccc
Q 018437 223 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF 302 (356)
Q Consensus 223 ~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~ 302 (356)
+|.++|+++ ++++|+|++|+.+..+ .++...++|.++.++||++++|.|+|+++++++ .. ..+..
T Consensus 164 ~i~~l~~~~------~~~li~Dea~~~g~~~-------~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~-~~-~~~~~ 228 (396)
T 2ch1_A 164 GVGQICHQH------DCLLIVDAVASLCGVP-------FYMDKWEIDAVYTGAQKVLGAPPGITPISISPK-AL-DVIRN 228 (396)
T ss_dssp THHHHHHHT------TCEEEEECTTTBTTBC-------CCTTTTTCCEEECCCC-CCCCCSSCEEEEECHH-HH-HHHHT
T ss_pred HHHHHHHHc------CCEEEEEccccccCCc-------cchhhcCcCEEEEcCCccccCCCCeEEEEECHH-HH-Hhhhh
Confidence 999999999 9999999999854332 233334679999999999999999999988652 21 11100
Q ss_pred c---c-C-C---------CCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 303 H---I-N-Y---------LGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 303 ~---~-~-~---------~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
. . . + ...........++.+....+++.++++.+..++++++.++..+++++|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 294 (396)
T 2ch1_A 229 RRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQIL 294 (396)
T ss_dssp CSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred ccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 0 0 0 0 111000111235666665677777888776677777777777766655
No 34
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.92 E-value=2.6e-24 Score=204.89 Aligned_cols=255 Identities=13% Similarity=-0.012 Sum_probs=183.2
Q ss_pred CCCChHHHHHHHHHHhcccC-CCcc---cCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHH-HH
Q 018437 65 TTWMEPECDKLVMASINKNY-VDMD---EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF-KR 139 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~~-~~~~---~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~-~~ 139 (356)
.++.++.+.+++.+.+.... .++. .++.......++++.+++++|+++ ..+++|+||++|+..++.++ .+
T Consensus 25 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g~~~-----~~v~~~~g~t~a~~~~~~~~~~~ 99 (390)
T 1elu_A 25 QGILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDP-----NTITITDNVTTGCDIVLWGLDWH 99 (390)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCG-----GGEEEESSHHHHHHHHHHHSCCC
T ss_pred cCCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcCCCH-----HHEEEeCChHHHHHHHHhCCCCC
Confidence 33455678888877665321 1111 233333566788888999999875 24899999999999999877 22
Q ss_pred HHHHHHHhcCCCCCCCeEEecCCCcchHHHH----HHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEEecCCCc
Q 018437 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEKF----ARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTL 214 (356)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~----~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (356)
+ +++|+++.++|.++... ++..|++++.+|++. +++.+|+++|++++++++++|++++++||
T Consensus 100 ~-------------gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~np 166 (390)
T 1elu_A 100 Q-------------GDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWN 166 (390)
T ss_dssp T-------------TCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTT
T ss_pred C-------------CCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEeccccC
Confidence 1 47899999999986643 567799999999973 24899999999999988999999999999
Q ss_pred ccccCCHHHHHHHHH----HhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEE
Q 018437 215 TGEFEDVKLLHDLLT----KKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (356)
Q Consensus 215 tG~~~~i~~I~~i~~----~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~ 290 (356)
||.+.|+++|.++|+ ++ ++++|+|++|+.+..+ .++...++|.++.|+|||+++|.|+|++++
T Consensus 167 tG~~~~~~~i~~l~~~~~~~~------~~~li~Dea~~~g~~~-------~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~ 233 (390)
T 1elu_A 167 TGQVLPLAEIMAVCRRHQGNY------PVRVLVDGAQSAGSLP-------LDFSRLEVDYYAFTGHKWFAGPAGVGGLYI 233 (390)
T ss_dssp TCCBCCHHHHHHHHHHCCSSS------CCEEEEECTTTBTTBC-------CCTTTSCCSEEEEESSSTTCCCTTCEEEEE
T ss_pred CceecCHHHHHHHHhhhhhhc------CcEEEEEcccccCCcC-------CChhhcCCCEEEccccccccCCCceEEEEE
Confidence 999999999999999 89 9999999999854332 223334689999999999999999999998
Q ss_pred eCCCCCccccccccCCCCCCC---------------CCccccCCCChhHHHHHHHHHHHhCHHH-HHHHHHHHHhccCcc
Q 018437 291 RTKDDLPDELVFHINYLGSDQ---------------PTFTLNFSKGSSQIIAQYYQFIRLGFEE-ITFTFISSLKVCPFL 354 (356)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~tr~~~~~~~~~~~l~~lg~~G-~~~~~~~~~~~a~~l 354 (356)
+++ .. +.+.. ...++.. ......+|.+....+++.++++.+..+| ++++.++..+++++|
T Consensus 234 ~~~-~~-~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l 309 (390)
T 1elu_A 234 HGD-CL-GEINP--TYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFL 309 (390)
T ss_dssp CTT-TG-GGCCC--CSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred CHH-hH-hhcCC--ccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 753 32 22111 0111100 0011135666665666777787776555 677777766666554
No 35
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.92 E-value=1.1e-23 Score=204.01 Aligned_cols=271 Identities=15% Similarity=0.074 Sum_probs=185.6
Q ss_pred cccccCCCChHHHHHHHHHHhcccCCCcc----cCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHH
Q 018437 60 LASFVTTWMEPECDKLVMASINKNYVDMD----EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (356)
Q Consensus 60 l~~~~~~~~~~~v~~~i~~~~~~~~~~~~----~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (356)
|....++++++.+.+++.+.+.....++. .+....+...++++++++++|+++ ..+++|+||++|+..++.
T Consensus 22 Ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~-----~~v~~~~g~t~a~~~~~~ 96 (432)
T 3a9z_A 22 MDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKP-----QDIIFTSGGTESNNLVIH 96 (432)
T ss_dssp CBTTTCCCCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCG-----GGEEEESCHHHHHHHHHH
T ss_pred eeCCccCCCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCc-----CeEEEeCChHHHHHHHHH
Confidence 33333445667888888877654322222 122455677899999999999975 248999999999999999
Q ss_pred HHHHHHHHHHHhcCCC-------C-CCCeEEecCCCcchHHHHHH----hhCCeeEEEEecCCccccCHHHHHHHHhhCc
Q 018437 136 AFKRKWQQKRKEQGKP-------Y-DKPNIVTGANVQVCWEKFAR----YFEVELKEVKLEEGYYVMNPVKAVELVDENT 203 (356)
Q Consensus 136 ~~~~~~~~~~~~~g~~-------~-~~~~vi~s~~~h~s~~~~~~----~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~ 203 (356)
++.+.+......+|.. . ..+.|+++..+|+++..... ..|++++.||++++++.+|+++|++++++++
T Consensus 97 ~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~~~ 176 (432)
T 3a9z_A 97 STVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTT 176 (432)
T ss_dssp HHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCCTTE
T ss_pred HHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHhccCCc
Confidence 8864321100001100 0 11478888889988755543 4689999999976348999999999999889
Q ss_pred eEEEEecCCCcccccCCHHHHHHHHHHhhhccCCC----------CcEEEecccccccccccCCCCcccccCCCceEEEE
Q 018437 204 ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWD----------TPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINV 273 (356)
Q Consensus 204 ~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~----------~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~ 273 (356)
++|++++++||||.+.|+++|.++|+++ + +++|+|++|+.+.. ..++...++|.++.
T Consensus 177 ~~v~~~~~~nptG~~~~~~~i~~l~~~~------~~~~~~~~~~~~~livDea~~~~~~-------~~~~~~~~~d~~~~ 243 (432)
T 3a9z_A 177 CLVTIMLANNETGVIMPISEISRRIKAL------NQIRAASGLPRVLVHTDAAQALGKR-------RVDVEDLGVDFLTI 243 (432)
T ss_dssp EEEECCSBCTTTCBBCCHHHHHHHHHHH------HHHHHHHTCCCCEEEEECTTTTTTS-------CCCHHHHCCSEEEE
T ss_pred eEEEEECcccCcccccCHHHHHHHHHhc------CcccccccCCceEEEEEchhhhCCc-------ccChhhcCCCEEEE
Confidence 9999999999999999999999999999 7 99999999976432 12222236899999
Q ss_pred cCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCc
Q 018437 274 SGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPF 353 (356)
Q Consensus 274 ~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~ 353 (356)
|+||++ +|. +|+++++++... .. ....+.++........+|.+....+++.++++.+ .++++++.++..+++++
T Consensus 244 s~~K~~-g~~-~G~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~-~~~~~~~~~~~~~~~~~ 317 (432)
T 3a9z_A 244 VGHKFY-GPR-IGALYVRGVGKL-TP--LYPMLFGGGQERNFRPGTENTPMIAGLGKAADLV-SENCETYEAHMRDIRDY 317 (432)
T ss_dssp EGGGTT-CCS-CEEEEETTBTTT-BC--CCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred ehhHhc-CCc-ceEEEEcccccc-CC--cCceeecCCccccccCCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHH
Confidence 999986 576 999998754211 11 1112222211111123566665566666677655 34777777777777666
Q ss_pred c
Q 018437 354 L 354 (356)
Q Consensus 354 l 354 (356)
|
T Consensus 318 l 318 (432)
T 3a9z_A 318 L 318 (432)
T ss_dssp H
T ss_pred H
Confidence 5
No 36
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.92 E-value=2.5e-24 Score=206.53 Aligned_cols=263 Identities=11% Similarity=0.001 Sum_probs=178.1
Q ss_pred cccccCCCChHHHHHHHHHHhcccCCCcc-cC---cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHH
Q 018437 60 LASFVTTWMEPECDKLVMASINKNYVDMD-EY---PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (356)
Q Consensus 60 l~~~~~~~~~~~v~~~i~~~~~~~~~~~~-~~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (356)
|....++++++.+.+++.+.+.....++. .+ ........++++++++++|+++ ..+++|+|+|+++..++.
T Consensus 30 ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~-----~~v~~~~g~t~al~~~~~ 104 (406)
T 3cai_A 30 FDAPAGMLIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADP-----GGVVLGADRAVLLSLLAE 104 (406)
T ss_dssp CBGGGCCCCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCG-----GGEEEESCHHHHHHHHHH
T ss_pred EeCCCcCCCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCC-----CeEEEeCChHHHHHHHHH
Confidence 33334446667888888877764322221 12 1245667789999999999975 348999999999988887
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHh----hCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecC
Q 018437 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARY----FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILG 211 (356)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~----~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~ 211 (356)
++...+ ..+++|+++.++|.++...+.. .|++++.+|++++++.+|+++|++++++++++|+++++
T Consensus 105 ~l~~~~----------~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~ 174 (406)
T 3cai_A 105 ASSSRA----------GLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISKSTRLVAVNSA 174 (406)
T ss_dssp HTGGGG----------BTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCCTTEEEEEEESB
T ss_pred HHhhcc----------CCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhCCCceEEEEeCC
Confidence 652110 0147899999999886554443 69999999998435899999999999989999999999
Q ss_pred CCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCee-EEEE
Q 018437 212 STLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVG-WVVW 290 (356)
Q Consensus 212 ~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g-~l~~ 290 (356)
+||||.+.|+++|.++|+++ ++++|+|++|+.+..+ .++...++|.++.|+||++ +|. +| ++++
T Consensus 175 ~nptG~~~~l~~i~~l~~~~------~~~li~D~a~~~g~~~-------~~~~~~~~d~~~~s~~K~~-g~~-~G~~~~~ 239 (406)
T 3cai_A 175 SGTLGGVTDLRAMTKLVHDV------GALVVVDHSAAAPYRL-------LDIRETDADVVTVNAHAWG-GPP-IGAMVFR 239 (406)
T ss_dssp CTTTCBBCCCHHHHHHHHHT------TCEEEEECTTTTTTCC-------CCHHHHCCSEEEEEGGGGT-SCS-CEEEEES
T ss_pred cCCccccCCHHHHHHHHHHc------CCEEEEEcccccCCCC-------CCchhcCCCEEEeehhhhc-CCC-cCeEEEE
Confidence 99999999999999999999 9999999999854332 2222226899999999986 565 88 8877
Q ss_pred eCCCCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHH--------------HHHHHHHHHHhccCcc
Q 018437 291 RTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFE--------------EITFTFISSLKVCPFL 354 (356)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~--------------G~~~~~~~~~~~a~~l 354 (356)
+++ .. +.+.....+.++........+|.+....+++.++++.+... +++++.++..+++++|
T Consensus 240 ~~~-~~-~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 315 (406)
T 3cai_A 240 DPS-VM-NSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYL 315 (406)
T ss_dssp CHH-HH-HTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ehH-HH-hhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHH
Confidence 542 21 11111000111111001113566665555555566554221 4666666666666554
No 37
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.91 E-value=2.5e-24 Score=202.17 Aligned_cols=249 Identities=12% Similarity=0.067 Sum_probs=178.1
Q ss_pred cCCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHH
Q 018437 64 VTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (356)
Q Consensus 64 ~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (356)
.+.++++.+.+++.+.+.. ..++.......++++++++++|+++ ..+++|+||++|+..++.++.++
T Consensus 8 ~p~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~-----~~i~~~~g~t~a~~~~~~~~~~~--- 74 (352)
T 1iug_A 8 GPVRLHPKALEALARPQLH-----HRTEAAREVFLKARGLLREAFRTEG-----EVLILTGSGTLAMEALVKNLFAP--- 74 (352)
T ss_dssp SSCCCCHHHHHHHHSCCCC-----TTSHHHHHHHHHHHHHHHHHHTCSS-----EEEEEESCHHHHHHHHHHHHCCT---
T ss_pred CCCCCCHHHHHHhccCCCC-----ccCHHHHHHHHHHHHHHHHHhCCCC-----ceEEEcCchHHHHHHHHHhccCC---
Confidence 3445668888888776642 1234555667789999999999974 24899999999999999887432
Q ss_pred HHHhcCCCCCCCeEEecCCCcchHH--HHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCH
Q 018437 144 KRKEQGKPYDKPNIVTGANVQVCWE--KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDV 221 (356)
Q Consensus 144 ~~~~~g~~~~~~~vi~s~~~h~s~~--~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i 221 (356)
+++|+++.++|+++. ..++..|++++.+|++++ +.+|+++|++ +++++|++++++||||.+.|+
T Consensus 75 ----------gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~l 140 (352)
T 1iug_A 75 ----------GERVLVPVYGKFSERFYEIALEAGLVVERLDYPYG-DTPRPEDVAK---EGYAGLLLVHSETSTGALADL 140 (352)
T ss_dssp ----------TCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTT-CCCCTTTSCC---SSCSEEEEESEETTTTEECCH
T ss_pred ----------CCeEEEEeCCchhHHHHHHHHHcCCceEEEeCCCC-CCCCHHHHhc---cCCcEEEEEEecCCcceecCH
Confidence 478999999999965 445567999999999864 7899998877 678899999999999999999
Q ss_pred HHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccc
Q 018437 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELV 301 (356)
Q Consensus 222 ~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~ 301 (356)
++|.++|++++. |+++|+|++|+.+..+ .++...++|.++.++|||+++|.|+|+++++++ .. +.+.
T Consensus 141 ~~i~~l~~~~~~----~~~li~D~a~~~~~~~-------~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~-~~-~~~~ 207 (352)
T 1iug_A 141 PALARAFKEKNP----EGLVGADMVTSLLVGE-------VALEAMGVDAAASGSQKGLMCPPGLGFVALSPR-AL-ERLK 207 (352)
T ss_dssp HHHHHHHHHHCT----TCEEEEECTTTBTTBC-------CCSGGGTCSEEEEESSSTTCCCSCEEEEEECHH-HH-HTCC
T ss_pred HHHHHHHHhhCC----CCEEEEECCccccCcc-------eeccccCeeEEEecCcccccCCCceeEEEECHH-HH-HHhh
Confidence 999999999843 7999999999754332 222222689999999999999999999998653 11 1100
Q ss_pred cccCCCCC------CCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 302 FHINYLGS------DQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 302 ~~~~~~~~------~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
. ..|... ........++.+....+++.++++.+... ++++.++..+++++|
T Consensus 208 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l 264 (352)
T 1iug_A 208 P-RGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPR-LEEHLALKAWQNALL 264 (352)
T ss_dssp C-CSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGG-HHHHHHHHHHHHHHH
T ss_pred C-CCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 0 000000 00001123555665566677777766544 666666666666554
No 38
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.91 E-value=3e-24 Score=210.31 Aligned_cols=233 Identities=9% Similarity=-0.059 Sum_probs=174.7
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----H
Q 018437 92 VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----W 167 (356)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s----~ 167 (356)
....+.+++++++++++|+++ ..+++|+|+|+++.+++.++.++ ...+++|+++.++|++ +
T Consensus 108 ~~~~~~~~l~~~la~~~g~~~-----~~v~~t~g~t~al~~~~~~~~~~----------~~~~~~Vl~~~~~~~s~~~~~ 172 (465)
T 3e9k_A 108 PWITGDESIVGLMKDIVGANE-----KEIALMNALTVNLHLLMLSFFKP----------TPKRYKILLEAKAFPSDHYAI 172 (465)
T ss_dssp CGGGTTHHHHGGGHHHHTCCG-----GGEEECSCHHHHHHHHHHHHCCC----------CSSSCEEEEETTCCHHHHHHH
T ss_pred cHHHhHHHHHHHHHHHcCCCc-----CCEEEECCHHHHHHHHHHHhccc----------cCCCCEEEEcCCcCCchHHHH
Confidence 344556678899999999986 34899999999999998887432 1124579999999987 4
Q ss_pred HHHHHhhCCee-----EEEEecCCccccCHHHHHHHHh---hCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCC
Q 018437 168 EKFARYFEVEL-----KEVKLEEGYYVMNPVKAVELVD---ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDT 239 (356)
Q Consensus 168 ~~~~~~~G~~v-----~~v~~~~~~~~~d~~~L~~~i~---~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~ 239 (356)
...++..|+++ ..+|.+. ++.+|+++|+++|+ +++++|++++++|+||.+.|+++|.++|+++ |+
T Consensus 173 ~~~~~~~G~~~~~~~v~~~~~~~-~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~------g~ 245 (465)
T 3e9k_A 173 ESQLQLHGLNIEESMRMIKPREG-EETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAK------GC 245 (465)
T ss_dssp HHHHHHTTCCHHHHEEEECCCTT-CSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHT------TC
T ss_pred HHHHHHcCCcceeeeEEEecCCC-CCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHc------CC
Confidence 45677789885 2334444 48999999999997 5789999999999999999999999999999 99
Q ss_pred cEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCC-CCcCeeEEEEeCCCCCccccccccCCCCCCC-------
Q 018437 240 PIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDELVFHINYLGSDQ------- 311 (356)
Q Consensus 240 ~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~-~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~------- 311 (356)
++|+|++++.+..+ .++...++|++++++||++. +|.|+|+++++++ ...........|.++..
T Consensus 246 ~vi~D~a~~~g~~~-------~~~~~~~~D~~~~s~~K~l~~gp~~~g~l~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~ 317 (465)
T 3e9k_A 246 YVGFDLAHAVGNVE-------LYLHDWGVDFACWCSYKYLNAGAGGIAGAFIHEK-HAHTIKPALVGWFGHELSTRFKMD 317 (465)
T ss_dssp EEEEECTTTTTTSC-------CCHHHHTCCEEEECSSSTTCCCTTCCCEEEECGG-GTTTSCCSSCCGGGBCHHHHTTCC
T ss_pred EEEEEhhhhcCCcC-------CchhhcCCCEEEECcccccccCCCceEEEEEcHH-HHhhcCCcccCccCCCCCcccccC
Confidence 99999999876553 33333478999999999994 7888999998654 22111001112222210
Q ss_pred --C------CccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 312 --P------TFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 312 --~------~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
. .....||.+....+++.+++..+...|++++.++..++++||
T Consensus 318 ~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l 368 (465)
T 3e9k_A 318 NKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYL 368 (465)
T ss_dssp SCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 0 011236888888999999999998888888888888887765
No 39
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.91 E-value=5e-24 Score=203.80 Aligned_cols=263 Identities=16% Similarity=0.087 Sum_probs=185.3
Q ss_pred ccccccCCCChHHHHHHHHHHhcccCCCcccC-----cchHHHHHHHHHHHHHHhCC-CCCCCCCCCeEEeCChhHHHHH
Q 018437 59 NLASFVTTWMEPECDKLVMASINKNYVDMDEY-----PVTTELQNRCVNMIAHLFNT-PVADDKTAVGVGTVGSSEAIML 132 (356)
Q Consensus 59 ~l~~~~~~~~~~~v~~~i~~~~~~~~~~~~~~-----~~~~~le~~~~~~la~l~g~-~~~~~~~~~~~~t~Ggt~a~~~ 132 (356)
+|....+++.++.+.+++.+.+.....++..+ ........++++++++++|. ++ ..+++|+|||+|+..
T Consensus 26 ~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-----~~v~~~~g~t~a~~~ 100 (406)
T 1kmj_A 26 YLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSA-----EELVFVRGTTEGINL 100 (406)
T ss_dssp ECCTTTCCCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCG-----GGEEEESSHHHHHHH
T ss_pred EecCCccCCCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCC-----CeEEEeCChhHHHHH
Confidence 44444455566788888887776432222211 12345667888999999998 33 348999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch----HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEE
Q 018437 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAA 208 (356)
Q Consensus 133 al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~ 208 (356)
++.+++.... ..+++|+++.++|++ +...++..|++++.+|++++ +.+|+++|++++++++++|++
T Consensus 101 ~~~~~~~~~~---------~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~v~~ 170 (406)
T 1kmj_A 101 VANSWGNSNV---------RAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPD-GTLQLETLPTLFDEKTRLLAI 170 (406)
T ss_dssp HHHHTHHHHC---------CTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTT-SCBCGGGHHHHCCTTEEEEEE
T ss_pred HHHHhhhhcC---------CCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCC-CCcCHHHHHHHhccCCeEEEE
Confidence 9998853100 114789999999876 34557778999999999864 899999999999989999999
Q ss_pred ecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEE
Q 018437 209 ILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWV 288 (356)
Q Consensus 209 ~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l 288 (356)
++++||||.+.|+++|.++|+++ ++++|+|++|+.+..+ .++...+.|.++.|+||++ +|.|+|++
T Consensus 171 ~~~~nptG~~~~l~~i~~l~~~~------~~~li~D~~~~~g~~~-------~~~~~~~~d~~~~s~~K~~-g~~G~G~~ 236 (406)
T 1kmj_A 171 THVSNVLGTENPLAEMITLAHQH------GAKVLVDGAQAVMHHP-------VDVQALDCDFYVFSGHKLY-GPTGIGIL 236 (406)
T ss_dssp ESBCTTTCCBCCHHHHHHHHHHT------TCEEEEECTTTTTTSC-------CCHHHHTCSEEEEEGGGTT-SCTTCEEE
T ss_pred eCCCccccCcCCHHHHHHHHHHc------CCEEEEEchhhcCCCC-------CcccccCCCEEEEEchhcc-CCCCcEEE
Confidence 99999999999999999999999 9999999999865432 1222226899999999977 78889999
Q ss_pred EEeCCCCCccccccccCCCCCC---------------CCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCc
Q 018437 289 VWRTKDDLPDELVFHINYLGSD---------------QPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPF 353 (356)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~ 353 (356)
+++++ .. +.+. ....++. .......|+.+....+++.++++.+...+++++.++..+++++
T Consensus 237 ~~~~~-~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~ 312 (406)
T 1kmj_A 237 YVKEA-LL-QEMP--PWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHY 312 (406)
T ss_dssp EECHH-HH-HHCC--CSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred EEeHH-HH-hhcC--CcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 98642 21 1111 0001110 0000113566666666776777777656666666666666555
Q ss_pred c
Q 018437 354 L 354 (356)
Q Consensus 354 l 354 (356)
|
T Consensus 313 l 313 (406)
T 1kmj_A 313 A 313 (406)
T ss_dssp H
T ss_pred H
Confidence 4
No 40
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.91 E-value=4.8e-24 Score=202.33 Aligned_cols=253 Identities=10% Similarity=0.050 Sum_probs=180.6
Q ss_pred CCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (356)
|.++++.+.+++.+.+.. + .++....+.+++++++++++|++.+. ...++|+||++|+..++.++..+
T Consensus 27 p~~~~~~v~~a~~~~~~~---~--~~~~~~~~~~~~~~~la~~~g~~~~~---~~i~~~~ggt~al~~~~~~~~~~---- 94 (376)
T 3f0h_A 27 PVMSSEEVRAIGAEQVPY---F--RTTEFSSTMLENEKFMLEYAKAPEGS---KAVFMTCSSTGSMEAVVMNCFTK---- 94 (376)
T ss_dssp SCCCCHHHHHHHTSCCCC---C--SSHHHHHHHHHHHHHHHHHHTCCTTC---EEEEESSCHHHHHHHHHHHHCCT----
T ss_pred CCCCcHHHHHHhcCCCCC---C--CCHHHHHHHHHHHHHHHHHhCCCCCc---eEEEEcCChhHHHHHHHHhccCC----
Confidence 445567888877654421 1 24455677889999999999997521 22445889999999999887532
Q ss_pred HHhcCCCCCCCeEEecCCCcchHH--HHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHH
Q 018437 145 RKEQGKPYDKPNIVTGANVQVCWE--KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVK 222 (356)
Q Consensus 145 ~~~~g~~~~~~~vi~s~~~h~s~~--~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~ 222 (356)
+++|+++.+.+++.. ..+...|++++.++++.+ +.+|+++|++++++++++|++++++||||.+.|++
T Consensus 95 ---------gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~ 164 (376)
T 3f0h_A 95 ---------KDKVLVIDGGSFGHRFVQLCEIHEIPYVALKLEHG-KKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYDTM 164 (376)
T ss_dssp ---------TCCEEEEESSHHHHHHHHHHHHTTCCEEEEECCTT-CCCCHHHHHTTTTSCCCEEEEESEETTTTEECCHH
T ss_pred ---------CCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCCC-CCCCHHHHHHhhccCceEEEEecccCCcceecCHH
Confidence 578888887666533 456677999999999864 89999999999988999999999999999999999
Q ss_pred HHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCcccccc
Q 018437 223 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF 302 (356)
Q Consensus 223 ~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~ 302 (356)
+|.++|+++ |+++|+|++++.+..+ .++...++|.++.++||++++|.|+|+++++++ .. +.+..
T Consensus 165 ~i~~l~~~~------~~~li~D~~~~~~~~~-------~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~-~~-~~~~~ 229 (376)
T 3f0h_A 165 MIGEFCKKN------NMFFVCDCVSAFLADP-------FNMNECGADVMITGSQKVLACPPGISVIVLAPR-GV-ERVEK 229 (376)
T ss_dssp HHHHHHHHT------TCEEEEECTTTTTTSC-------CCHHHHTCSEEEEETTTTTCCCSSCEEEEECHH-HH-HHHHT
T ss_pred HHHHHHHHc------CCEEEEEcCccccCcc-------ccccccCccEEEecCcccccCCCceEEEEECHH-HH-HHhhc
Confidence 999999999 9999999999875442 222223689999999999988999999887643 21 11110
Q ss_pred --ccCC-CCCC-----CCCccccCCCChhHHHHHHHHHHHhCHH-HHHHHHHHHHhccCcc
Q 018437 303 --HINY-LGSD-----QPTFTLNFSKGSSQIIAQYYQFIRLGFE-EITFTFISSLKVCPFL 354 (356)
Q Consensus 303 --~~~~-~~~~-----~~~~~~~~tr~~~~~~~~~~~l~~lg~~-G~~~~~~~~~~~a~~l 354 (356)
...+ .... .......++.+....+++.+++..+..+ |++++.++..+++++|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l 290 (376)
T 3f0h_A 230 SKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADF 290 (376)
T ss_dssp CCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred CCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 0111 1000 0000112344444457777888877666 6888888877777665
No 41
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.91 E-value=1.2e-23 Score=198.98 Aligned_cols=194 Identities=15% Similarity=0.105 Sum_probs=152.2
Q ss_pred CCChHHHHHHHHHHhcccC----C-CcccCcchHHHHHHHHHH-HHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHH
Q 018437 66 TWMEPECDKLVMASINKNY----V-DMDEYPVTTELQNRCVNM-IAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (356)
Q Consensus 66 ~~~~~~v~~~i~~~~~~~~----~-~~~~~~~~~~le~~~~~~-la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~ 139 (356)
.++++.+.+++.+.+.... . .+...........+++++ +++++|.+ .+++|+|||+|+..++.++..
T Consensus 19 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~~-------~v~~~~g~t~a~~~~~~~~~~ 91 (371)
T 2e7j_A 19 GKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCD-------VARVTNGAREAKFAVMHSLAK 91 (371)
T ss_dssp CCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSS-------EEEEESSHHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCCC-------EEEEeCChHHHHHHHHHHHhC
Confidence 3456788888887765321 0 011111223345577888 99999886 389999999999999998743
Q ss_pred HHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEE--ecCCccccCHHHHHHHHh-----hCceEEEEecCC
Q 018437 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVK--LEEGYYVMNPVKAVELVD-----ENTICVAAILGS 212 (356)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~--~~~~~~~~d~~~L~~~i~-----~~~~~v~~~~~~ 212 (356)
+ +++|+++.++|+++...++..|++++.+| ++++ +.+|+++|+++++ +++++|++++++
T Consensus 92 ~-------------gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~ 157 (371)
T 2e7j_A 92 K-------------DAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPD-YAITPENFAQTIEETKKRGEVVLALITYPD 157 (371)
T ss_dssp T-------------TCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTT-CCCCHHHHHHHHHHHTTTSCEEEEEEESSC
T ss_pred C-------------CCEEEEccCcchHHHHHHHHcCCeEEEeecccCCC-CCcCHHHHHHHHHhhcccCCeEEEEEECCC
Confidence 2 57999999999999999999999999999 7764 8999999999998 688999999999
Q ss_pred CcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 213 TLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 213 ~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
||+|.+.|+++|.++|+++ |+++|+|++|+.+..+ .++...++|.++.|+||++++|.++|++++++
T Consensus 158 nptG~~~~~~~i~~~~~~~------~~~li~D~a~~~~~~~-------~~~~~~~~di~~~s~sK~~~~~~~~G~~~~~~ 224 (371)
T 2e7j_A 158 GNYGNLPDVKKIAKVCSEY------DVPLLVNGAYAIGRMP-------VSLKEIGADFIVGSGHKSMAASGPIGVMGMKE 224 (371)
T ss_dssp TTTCCCCCHHHHHHHHHTT------TCCEEEECTTTBTTBC-------CCHHHHTCSEEEEEHHHHSSCCSSCEEEEECT
T ss_pred CCCcccCCHHHHHHHHHHc------CCeEEEECccccCCCC-------CChhhcCCCEEEecCCcCCCCCCCcEEEEEec
Confidence 9999999999999999999 9999999999876542 12222257899999999998999999999876
Q ss_pred C
Q 018437 293 K 293 (356)
Q Consensus 293 ~ 293 (356)
+
T Consensus 225 ~ 225 (371)
T 2e7j_A 225 E 225 (371)
T ss_dssp T
T ss_pred h
Confidence 4
No 42
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.90 E-value=4.4e-24 Score=202.88 Aligned_cols=261 Identities=12% Similarity=0.019 Sum_probs=175.0
Q ss_pred CCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (356)
|..+++.+.+++.+.... ++ ++.......+++++++++++....- ....+++|+|||+|+..++.++...+
T Consensus 13 p~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~v~~~~g~t~al~~~~~~~~~~~--- 83 (385)
T 2bkw_A 13 PIILSGAVQKALDVPSLG---HT--SPEFVSIFQRVLKNTRAVFKSAAAS-KSQPFVLAGSGTLGWDIFASNFILSK--- 83 (385)
T ss_dssp SCCCCHHHHHTTSCCCCC---TT--SHHHHHHHHHHHHHHHHHTTCCGGG-TCEEEEEESCTTHHHHHHHHHHSCTT---
T ss_pred CcCchHHHHHHHhccccc---cC--CHHHHHHHHHHHHHHHHHhCCCCCC-CCceEEEcCchHHHHHHHHHHHhccC---
Confidence 344557777776554432 11 3333444556777788887764200 01348899999999999998874100
Q ss_pred HHhcCCCCCCCeEEecCC-C-cchHHHHHHhhCCeeEEEEe-cCCccccCHHHHHHHHhh-CceEEEEecCCCcccccCC
Q 018437 145 RKEQGKPYDKPNIVTGAN-V-QVCWEKFARYFEVELKEVKL-EEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFED 220 (356)
Q Consensus 145 ~~~~g~~~~~~~vi~s~~-~-h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~ 220 (356)
..+++|+++.. . |.++...++..|++++.+|+ ++ ++.+|+++|++++++ ++++|++++++||||.+.|
T Consensus 84 -------~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~ 155 (385)
T 2bkw_A 84 -------APNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKI-GESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSD 155 (385)
T ss_dssp -------CSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSST-TSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC
T ss_pred -------CCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecCCC-CCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcC
Confidence 01467776644 3 33334677888999999999 75 489999999999987 8999999999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCcccc
Q 018437 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDEL 300 (356)
Q Consensus 221 i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~ 300 (356)
+++|.++|++++. ++++|+|++|+.+..+ .++...++|.++.++||++++|.|+|+++++++ .+.+.+
T Consensus 156 l~~i~~~~~~~~~----~~~li~D~a~~~~~~~-------~~~~~~~~d~~~~s~~K~~~~~~G~G~~~~~~~-~~~~~l 223 (385)
T 2bkw_A 156 LKAISQAIKQTSP----ETFFVVDAVCSIGCEE-------FEFDEWGVDFALTASQKAIGAPAGLSISLCSSR-FMDYAL 223 (385)
T ss_dssp HHHHHHHHHHHCT----TSEEEEECTTTTTTSC-------CCTTTTTCSEEEEESSSTTCCCSCEEEEEECHH-HHHHHT
T ss_pred HHHHHHHHHhhCC----CCEEEEECccccCCcc-------ccccccCceEEEecCccccccCCcceEEEEcHH-HHHHHH
Confidence 9999999999832 6999999999754332 223333689999999999999999999998653 211011
Q ss_pred c-----cccCCCCC-----------CCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 301 V-----FHINYLGS-----------DQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 301 ~-----~~~~~~~~-----------~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
. ....|.+. ........++.+....+++.++++.+...|++++.++..+++++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 293 (385)
T 2bkw_A 224 NDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWF 293 (385)
T ss_dssp CHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred hhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 0 00011100 000000124666666677778888776666777777777666654
No 43
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.90 E-value=6.6e-23 Score=193.13 Aligned_cols=252 Identities=11% Similarity=-0.016 Sum_probs=174.9
Q ss_pred CCCChHHHHHHHHHHhcccCCCcccCcchH-HHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASINKNYVDMDEYPVTT-ELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~-~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (356)
|..+++.+.+++.+.+. ++ ++... ....++++++++++|.+.+ ...+++|+||++|+..++.+++.+
T Consensus 12 p~~~~~~v~~a~~~~~~----~~--~~~~~~~~~~~l~~~la~~~g~~~~---~~~v~~~~g~t~a~~~~~~~~~~~--- 79 (366)
T 1m32_A 12 PLTTSRTVKEAMLFDSC----TW--DDDYNIGVVEQIRQQLTALATASEG---YTSVLLQGSGSYAVEAVLGSALGP--- 79 (366)
T ss_dssp SCCCCHHHHHTTCCCCC----TT--SHHHHTTTHHHHHHHHHHHHCSSSS---EEEEEEESCHHHHHHHHHHHSCCT---
T ss_pred CcCCCHHHHHHHhhhhc----CC--CHHHHHHHHHHHHHHHHHHhCCCCc---CcEEEEecChHHHHHHHHHHhcCC---
Confidence 44456777777755331 11 11112 3455677789999993211 124899999999999999887432
Q ss_pred HHHhcCCCCCCCeEEec-CCCcch-HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh--CceEEEEecCCCcccccC
Q 018437 144 KRKEQGKPYDKPNIVTG-ANVQVC-WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE--NTICVAAILGSTLTGEFE 219 (356)
Q Consensus 144 ~~~~~g~~~~~~~vi~s-~~~h~s-~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~--~~~~v~~~~~~~~tG~~~ 219 (356)
+++|++. .++|.+ +...+...|++++.+|++++ +.+|+++|++++++ ++++|++++++||||.+.
T Consensus 80 ----------gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~ 148 (366)
T 1m32_A 80 ----------QDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEV-ARPDVQAIDAILNADPTISHIAMVHSETTTGMLN 148 (366)
T ss_dssp ----------TCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCTT-SCCCHHHHHHHHHHCTTCCEEEEESEETTTTEEC
T ss_pred ----------CCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCCC-CCCCHHHHHHHHhcCCCeEEEEEecccCCcceec
Confidence 3556554 577875 67778888999999999864 88999999999986 478899999999999999
Q ss_pred CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccc
Q 018437 220 DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDE 299 (356)
Q Consensus 220 ~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~ 299 (356)
|+++|.++|+++ |+++|+|++|+.+..+ .++...++|.++.++||++++|.|+|+++++++ .. +.
T Consensus 149 ~l~~i~~l~~~~------~~~li~Dea~~~~~~~-------~~~~~~~~di~~~s~~K~~~~~~g~G~~~~~~~-~~-~~ 213 (366)
T 1m32_A 149 PIDEVGALAHRY------GKTYIVDAMSSFGGIP-------MDIAALHIDYLISSANKCIQGVPGFAFVIAREQ-KL-AA 213 (366)
T ss_dssp CHHHHHHHHHHH------TCEEEEECTTTTTTSC-------CCTTTTTCSEEEEESSSTTCCCSSEEEEEEEHH-HH-TT
T ss_pred CHHHHHHHHHHc------CCEEEEECCccccCcC-------ccccccCccEEEecCcccccCCCceEEEEECHH-HH-Hh
Confidence 999999999999 9999999999864432 223223689999999999989999999998753 11 11
Q ss_pred cccc-cCCCCCC--------CCCccccCCCChhHHHHHHHHHHHhCHHH-HHHHHHHHHhccCcc
Q 018437 300 LVFH-INYLGSD--------QPTFTLNFSKGSSQIIAQYYQFIRLGFEE-ITFTFISSLKVCPFL 354 (356)
Q Consensus 300 ~~~~-~~~~~~~--------~~~~~~~~tr~~~~~~~~~~~l~~lg~~G-~~~~~~~~~~~a~~l 354 (356)
+... ..|.... .......++.+....+++.++++.+...| ++++.++..+++++|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l 278 (366)
T 1m32_A 214 CKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSL 278 (366)
T ss_dssp CTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred hcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHH
Confidence 1100 0111000 00000124555655667778888776666 777777777766655
No 44
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.90 E-value=8.6e-23 Score=194.53 Aligned_cols=250 Identities=12% Similarity=-0.022 Sum_probs=177.6
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
+++.+.+++.+.+......|... ..++++++++++++.+|.+.+. ..+++|+||++++..++.++..+
T Consensus 41 ~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~---~~i~~~~g~~~a~~~~~~~l~~~------- 108 (391)
T 3dzz_A 41 IAPEIMASMEEKLKVAAFGYESV--PAEYYKAVADWEEIEHRARPKE---DWCVFASGVVPAISAMVRQFTSP------- 108 (391)
T ss_dssp CCHHHHHHHHHHHTTCCCCCBCC--CHHHHHHHHHHHHHHHSCCCCG---GGEEEESCHHHHHHHHHHHHSCT-------
T ss_pred CCHHHHHHHHHHHhcCcCCCCCC--CHHHHHHHHHHHHHHhCCCCCH---HHEEECCCHHHHHHHHHHHhCCC-------
Confidence 45788999988876543343332 5789999999999999955321 45899999999999999887432
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec--CCccccCHHHHHHHHh-hCceEEEEecCCCccccc---CCH
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE--EGYYVMNPVKAVELVD-ENTICVAAILGSTLTGEF---EDV 221 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~--~~~~~~d~~~L~~~i~-~~~~~v~~~~~~~~tG~~---~~i 221 (356)
+++|+++.++|.++...++..|++++.+|++ ++++.+|+++|+++++ +++++|++++++||||.+ +++
T Consensus 109 ------gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l 182 (391)
T 3dzz_A 109 ------GDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEV 182 (391)
T ss_dssp ------TCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHH
T ss_pred ------CCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHH
Confidence 5799999999999999999999999999985 3446799999999998 689999999999999999 789
Q ss_pred HHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-C--CCce--EEEEcCCcCCC-CCcCeeEEEEeCCCC
Q 018437 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-L--PLVK--SINVSGHKYGL-VYAGVGWVVWRTKDD 295 (356)
Q Consensus 222 ~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~--~~~D--s~~~~~hK~l~-~P~g~g~l~~~~~~~ 295 (356)
++|.++|+++ |+++|+|++|+++... ......+. . ...| .+..++||+++ .+.++|+++.++++.
T Consensus 183 ~~i~~~~~~~------~~~li~De~~~~~~~~---g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~ 253 (391)
T 3dzz_A 183 KRIAELCAKH------QVLLISDEIHGDLVLT---DEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDL 253 (391)
T ss_dssp HHHHHHHHHT------TCEEEEECTTTTCBCS---SCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHH
T ss_pred HHHHHHHHHC------CCEEEEecccccccCC---CCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHH
Confidence 9999999999 9999999999875541 11112222 1 1145 88889999974 556789998764433
Q ss_pred CccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 296 LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
. +.+......... ++.+....+++..++.. +.+.++++.++..+++++|
T Consensus 254 ~-~~~~~~~~~~~~--------~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l 302 (391)
T 3dzz_A 254 R-ARAEESFFLAGI--------GEPNLLAIPAAIAAYEE-GHDWLRELKQVLRDNFAYA 302 (391)
T ss_dssp H-HHHHHHHHHHTC--------SSCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHhhcc--------CCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHH
Confidence 2 111110000000 12222334444555554 4555666666666555544
No 45
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.90 E-value=1.9e-23 Score=196.77 Aligned_cols=252 Identities=12% Similarity=0.025 Sum_probs=182.1
Q ss_pred CCCChHHHHHHHHHHhcccC-CCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (356)
|..+++.+.+++.+.+.... .....++...++.+++++++++++|.+.. ..+++|+||++|+..++.++..
T Consensus 12 p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~----~~v~~~~g~t~al~~~~~~l~~---- 83 (362)
T 3ffr_A 12 PSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSN----YEVLFLASATEIWERIIQNCVE---- 83 (362)
T ss_dssp SCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTT----EEEEEESCHHHHHHHHHHHHCS----
T ss_pred CcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCC----cEEEEeCCchHHHHHHHHhccC----
Confidence 33445677777766655433 12224567778888999999999999631 3588999999999999987742
Q ss_pred HHHhcCCCCCCCeEEecCCCcch--HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCH
Q 018437 144 KRKEQGKPYDKPNIVTGANVQVC--WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDV 221 (356)
Q Consensus 144 ~~~~~g~~~~~~~vi~s~~~h~s--~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i 221 (356)
+.+++..+.|++ +...++..|++++.++++.+ +.+|+++|+ +++++++|++++++||||.+.|+
T Consensus 84 -----------~~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~l 149 (362)
T 3ffr_A 84 -----------KKSFHCVNGSFSKRFYEFAGELGREAYKEEAAFG-KGFYPADIT--VPADAEIICLTHNETSSGVSMPV 149 (362)
T ss_dssp -----------SEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTT-CCCCGGGCC--CCTTCCEEEEESEETTTTEECCH
T ss_pred -----------CcEEEEcCcHHHHHHHHHHHHhCCCeEEEecCCC-CCCCHHHHh--ccCCccEEEEEcCCCCcceeCCH
Confidence 256666666655 44567778999999999764 899999998 77889999999999999999999
Q ss_pred HHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccc
Q 018437 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELV 301 (356)
Q Consensus 222 ~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~ 301 (356)
++|.++|+++| |+++|+|++|+.+..+ .++ ..+|.++.++||++++|.|+|+++++++ .. +.+.
T Consensus 150 ~~i~~la~~~p-----~~~li~D~a~~~~~~~-------~~~--~~~d~~~~s~~K~~~~~~G~g~~~~~~~-~~-~~~~ 213 (362)
T 3ffr_A 150 EDINTFRDKNK-----DALIFVDAVSSLPYPK-------FDW--TKIDSVFFSVQKCFGLPAGLGVWILNDR-VI-EKSK 213 (362)
T ss_dssp HHHTTSGGGST-----TSEEEEECTTTTTSSC-------CCT--TSCSEEEEETTSTTCCCSCCEEEEEEHH-HH-HHHH
T ss_pred HHHHHHHHhCC-----CCEEEEecccccCCcc-------cCh--hHCcEEEEecccccCCCCceEEEEECHH-HH-HHhh
Confidence 99999999984 7999999998764432 222 2389999999999988999999888653 21 1111
Q ss_pred c-cc-----CCCCCC------CCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 302 F-HI-----NYLGSD------QPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 302 ~-~~-----~~~~~~------~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
. .. .+.... .......++.+....+++..+++.+..+|++++.++..++++++
T Consensus 214 ~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l 278 (362)
T 3ffr_A 214 ALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALI 278 (362)
T ss_dssp HHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred hccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 0 00 000000 00011246677777778888888887777888888888877765
No 46
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.90 E-value=8.2e-24 Score=201.30 Aligned_cols=256 Identities=12% Similarity=-0.061 Sum_probs=186.2
Q ss_pred cccCCCChHHHHHHHHHHhcc---cCCC----cccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEE-eCChhHHHHHH
Q 018437 62 SFVTTWMEPECDKLVMASINK---NYVD----MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG-TVGSSEAIMLA 133 (356)
Q Consensus 62 ~~~~~~~~~~v~~~i~~~~~~---~~~~----~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~-t~Ggt~a~~~a 133 (356)
.+.+.+.++.|.+++.+.+.+ |+.. ...++.+.++.+++++.+++++|++++ ..++| |+|||+++.++
T Consensus 18 ~at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~----~evif~t~~~T~a~n~a 93 (377)
T 3e77_A 18 LYFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDN----YKVIFLQGGGCGQFSAV 93 (377)
T ss_dssp EECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTT----EEEEEESSHHHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC----CeEEEEcCchHHHHHHH
Confidence 444556778999999887753 2211 122456778888999999999999742 23777 57999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch--HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecC
Q 018437 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC--WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILG 211 (356)
Q Consensus 134 l~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s--~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~ 211 (356)
+..+..+ ..++++++...+|.+ +.+.++..|+.++.++++.+ +..+++.++.++++++++|.+++.
T Consensus 94 ~~~l~~~-----------~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~~-~~~~~~~~~~~i~~~t~lV~~~h~ 161 (377)
T 3e77_A 94 PLNLIGL-----------KAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKLGS-YTKIPDPSTWNLNPDASYVYYCAN 161 (377)
T ss_dssp HHHHGGG-----------STTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCCSS-SCSCCCGGGCCCCTTCSCEEEESE
T ss_pred HHhccCC-----------CCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccCCC-cCCCCChHHhccCCCccEEEEeCc
Confidence 9877532 013577666666655 34555667888888888654 567788888888889999999999
Q ss_pred CCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 212 STLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 212 ~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
+|.+|++.|+ +|+++ ++++|||++++.+..| ++++. .|.+++++|||+ +|.|+|++++|
T Consensus 162 et~tG~~~pi-----i~~~~------~~~~~vD~~q~~g~~~-------id~~~--~~~~~~s~~K~~-gp~G~g~l~~~ 220 (377)
T 3e77_A 162 ETVHGVEFDF-----IPDVK------GAVLVCDMSSNFLSKP-------VDVSK--FGVIFAGAQKNV-GSAGVTVVIVR 220 (377)
T ss_dssp ETTTTEECSS-----CCCCT------TCCEEEECTTTTTSSC-------CCGGG--CSEEEEEGGGTT-SCTTCEEEEEE
T ss_pred cCchheEchh-----hhccC------CCEEEEEcccccCCCC-------Cchhh--cCEEEEeccccc-CCCccEEEEEc
Confidence 9999999998 46777 9999999999876663 45543 235889999999 79999999998
Q ss_pred CCCCCccccccccCCCCCC--CCCccccCCCChhHHHHHHHHHHHhCHH-HHHHHHHHHHhccCccc
Q 018437 292 TKDDLPDELVFHINYLGSD--QPTFTLNFSKGSSQIIAQYYQFIRLGFE-EITFTFISSLKVCPFLV 355 (356)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~tr~~~~~~~~~~~l~~lg~~-G~~~~~~~~~~~a~~l~ 355 (356)
++.+. ..-...+.|+... .......+|++...++++..+++.+-.+ |++++.++..+++++|.
T Consensus 221 ~~~l~-~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~ 286 (377)
T 3e77_A 221 DDLLG-FALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIY 286 (377)
T ss_dssp TTSCS-CCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHh-hccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 75331 1100111222100 0112235899998899999999999888 89999999999988874
No 47
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.89 E-value=9.5e-23 Score=200.85 Aligned_cols=281 Identities=12% Similarity=-0.007 Sum_probs=186.5
Q ss_pred HHHHHHHHHhhhcCCCCcccccccCCCChHHHHHHHHHHhcccC--C-----CcccCcchHHHHHHHHHHHHHHhCCCCC
Q 018437 41 AAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNY--V-----DMDEYPVTTELQNRCVNMIAHLFNTPVA 113 (356)
Q Consensus 41 ~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~i~~~~~~~~--~-----~~~~~~~~~~le~~~~~~la~l~g~~~~ 113 (356)
++.+.+.+..... ...++|.... +++++.+.+++.+.+.... + .|...+...++|+.+++++++++|++.+
T Consensus 31 ~~~~~~~~~~~~~-~~~i~L~a~e-~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~ 108 (483)
T 1rv3_A 31 EVYDIIKKESNRQ-RVGLELIASE-NFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQ 108 (483)
T ss_dssp HHHHHHHHHHHHH-HSSEECCTTC-CCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHHHh-hcCeEEEcCC-CCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcc
Confidence 3555554443322 1223443332 3556889999887775422 1 1223345678999999999999999852
Q ss_pred CCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH--------HHHhhCCeeEEEEe--
Q 018437 114 DDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK--------FARYFEVELKEVKL-- 183 (356)
Q Consensus 114 ~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~--------~~~~~G~~v~~v~~-- 183 (356)
+ ....+++++|+ ++|..++.++.++ +++|++++++|.++.. .+...|..++.+++
T Consensus 109 ~-~~~~V~~~sGs-~an~~~~~all~p-------------GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~ 173 (483)
T 1rv3_A 109 C-WGVNVQPYSGS-PANFAVYTALVEP-------------HGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKV 173 (483)
T ss_dssp T-EEEECCCSSHH-HHHHHHHHHHTCT-------------TCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECB
T ss_pred c-CceEEEECCcH-HHHHHHHHHhcCC-------------CCEEEEecCccCcCcchhhhhcccCcccccceEEEEECcc
Confidence 1 00124555554 8888878777542 5799999998877653 23445544555555
Q ss_pred cCCccccCHHHHHHHHh-hCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccc
Q 018437 184 EEGYYVMNPVKAVELVD-ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD 262 (356)
Q Consensus 184 ~~~~~~~d~~~L~~~i~-~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~ 262 (356)
+++++.+|+++|+++++ ++|++|++ +++|++ .+.|+++|.++|+++ |+++|+|+||+.+..+. +.....
T Consensus 174 ~~~~~~iD~d~le~~i~~~~tklIi~-~~sn~~-~~~dl~~i~~ia~~~------g~~livD~ah~~g~~~~--~~~~~p 243 (483)
T 1rv3_A 174 NPDTGYIDYDRLEENARLFHPKLIIA-GTSCYS-RNLDYGRLRKIADEN------GAYLMADMAHISGLVVA--GVVPSP 243 (483)
T ss_dssp CTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSCC-SCCCHHHHHHHHHHT------TCEEEEECTTTHHHHHH--TSSCCG
T ss_pred ccCCCcCCHHHHHHHHhhcCCcEEEE-eCCcCC-CcCCHHHHHHHHHHc------CCEEEEEccchhccccc--CCCCCC
Confidence 64469999999999998 78999988 888887 889999999999999 99999999987554421 111111
Q ss_pred ccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccc----cCC-----CCCCCCCccccCCCChhHHHHHHHHHH
Q 018437 263 FRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFH----INY-----LGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (356)
Q Consensus 263 ~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~----~~~-----~~~~~~~~~~~~tr~~~~~~~~~~~l~ 333 (356)
.+++|.++.++||++.+|.| |+++++++.. . +... ..| +... ......|+.+...++++.++++
T Consensus 244 --~~~~div~~s~~K~l~Gprg-G~i~~~~~~~-~--~~~~~g~~~~y~~~~~~~~~-~~~~~~g~~~~~~iaal~~Al~ 316 (483)
T 1rv3_A 244 --FEHCHVVTTTTHKTLRGCRA-GMIFYRRGVR-S--VDPKTGKEILYNLESLINSA-VFPGLQGGPHNHAIAGVAVALK 316 (483)
T ss_dssp --GGTCSEEEEESSGGGCCCSC-EEEEEECSBC-C---------CCBCCHHHHHHHH-HTTTTCCSCCHHHHHHHHHHHH
T ss_pred --CCCCcEEEecCcccCCCCCc-eEEEEcchhh-h--hccccCcchhhHHHHHhhhh-cCCcccCCccHHHHHHHHHHHH
Confidence 23689999999999999998 9999986421 0 0000 000 0000 0011246666766778888888
Q ss_pred HhCHHHHHHHHHHHHhccCccc
Q 018437 334 RLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 334 ~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
.+..++++++.++..+++++|+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~l~ 338 (483)
T 1rv3_A 317 QAMTPEFKEYQRQVVANCRALS 338 (483)
T ss_dssp HHTSHHHHHHHHHHHHHHHHHH
T ss_pred HHhChhHHHHHHHHHHHHHHHH
Confidence 8877788888888888877763
No 48
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.89 E-value=4.1e-22 Score=190.01 Aligned_cols=213 Identities=10% Similarity=0.014 Sum_probs=163.8
Q ss_pred CCCCcccccccCCC-ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHH
Q 018437 54 GNPRLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (356)
Q Consensus 54 ~~~~~~l~~~~~~~-~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~ 132 (356)
++..++|..+.+.. +++.+.+++.+.++.....|...++..++++++.+++.+.+|++.+. ..+++|+||++|+..
T Consensus 29 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~---~~v~~~~g~~~a~~~ 105 (388)
T 1j32_A 29 GIDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGA---DNILVTNGGKQSIFN 105 (388)
T ss_dssp TCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCG---GGEEEESHHHHHHHH
T ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh---hhEEEcCCHHHHHHH
Confidence 33334454444432 35778888887775433345555578899999999999999975422 358999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEEecC
Q 018437 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILG 211 (356)
Q Consensus 133 al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~ 211 (356)
++.++.++ +++|+++.++|+++...++..|++++.+|+++ +++.+|+++|++++++++++|++++|
T Consensus 106 ~~~~~~~~-------------gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p 172 (388)
T 1j32_A 106 LMLAMIEP-------------GDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTP 172 (388)
T ss_dssp HHHHHCCT-------------TCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESS
T ss_pred HHHHhcCC-------------CCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCcCceEEEEeCC
Confidence 99887432 46899999999999999999999999999875 24789999999999888999999999
Q ss_pred CCcccccC---CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCc---cccc--CCCceEEEEcCCcCCCCCc
Q 018437 212 STLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE---WDFR--LPLVKSINVSGHKYGLVYA 283 (356)
Q Consensus 212 ~~~tG~~~---~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~---~~~~--~~~~Ds~~~~~hK~l~~P~ 283 (356)
+||||.+. ++++|.++|+++ |+++|+|++|+++... .... ..+. ..+.|.+..++||++ ++.
T Consensus 173 ~nptG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~s~sK~~-~~~ 242 (388)
T 1j32_A 173 SNPTGMVYTPDEVRAIAQVAVEA------GLWVLSDEIYEKILYD---DAQHLSIGAASPEAYERSVVCSGFAKTY-AMT 242 (388)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHH------TCEEEEECTTTTCBCT---TCCCCCGGGSCHHHHHTEEEEEESTTTT-TCT
T ss_pred CCCCCcCCCHHHHHHHHHHHHHc------CCEEEEEccchhcccC---CCCCCCHHHccccccCCEEEEeechhcc-CCc
Confidence 99999984 599999999999 9999999999875441 1111 1111 134788999999998 444
Q ss_pred C--eeEEEEeC
Q 018437 284 G--VGWVVWRT 292 (356)
Q Consensus 284 g--~g~l~~~~ 292 (356)
| +|+++.++
T Consensus 243 G~r~G~~~~~~ 253 (388)
T 1j32_A 243 GWRVGFLAGPV 253 (388)
T ss_dssp TTCCEEEECCH
T ss_pred ccceEEEEeCH
Confidence 5 89998753
No 49
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.89 E-value=2.2e-22 Score=193.57 Aligned_cols=255 Identities=16% Similarity=0.004 Sum_probs=173.2
Q ss_pred CCCChHHHHHHHHHHhcccCCCccc---C-cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASINKNYVDMDE---Y-PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~~~~~~~---~-~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~ 140 (356)
++++++.+.+++.+.+....+++.. . .+......++++++++++|+++ ..+++|+||++++..++.+++..
T Consensus 37 ~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~-----~~v~~~~g~t~al~~al~~~~~~ 111 (416)
T 1qz9_A 37 LGARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARD-----GEVVVTDTTSINLFKVLSAALRV 111 (416)
T ss_dssp SCCCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCT-----TSEEECSCHHHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCCCc-----ccEEEeCChhHHHHHHHHhhccc
Confidence 3355567888888777543222211 0 1233556678899999999975 24789999999998888876521
Q ss_pred HHHHHHhcCCCCCCC-eEEecCCCcchHHHHH----Hhh--CCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCC
Q 018437 141 WQQKRKEQGKPYDKP-NIVTGANVQVCWEKFA----RYF--EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (356)
Q Consensus 141 ~~~~~~~~g~~~~~~-~vi~s~~~h~s~~~~~----~~~--G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (356)
... ..+ ++ .|+++..+|.++...+ +.. |++++.+|+ +++|++++++++++|++++++|
T Consensus 112 ~~~--~~~-----gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~--------~~~l~~~i~~~~~~v~~~~~~n 176 (416)
T 1qz9_A 112 QAT--RSP-----ERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS--------PEELPQAIDQDTAVVMLTHVNY 176 (416)
T ss_dssp HHH--HST-----TCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS--------GGGHHHHCSTTEEEEEEESBCT
T ss_pred ccc--cCC-----CCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc--------HHHHHHHhCCCceEEEEecccc
Confidence 000 001 34 4667778998765543 334 888888875 6778899988899999999999
Q ss_pred cccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCe-eEEEEeC
Q 018437 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV-GWVVWRT 292 (356)
Q Consensus 214 ~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~-g~l~~~~ 292 (356)
|||.+.|+++|.++|+++ |+++|+|++|+.+..+ .++...++|.++.|+||+++++.|+ |++++++
T Consensus 177 ptG~~~~l~~i~~l~~~~------~~~li~D~a~~~g~~~-------~~~~~~~~d~~~~s~~K~l~~g~~~~g~l~~~~ 243 (416)
T 1qz9_A 177 KTGYMHDMQALTALSHEC------GALAIWDLAHSAGAVP-------VDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSP 243 (416)
T ss_dssp TTCBBCCHHHHHHHHHHH------TCEEEEECTTTTTTSC-------CCHHHHTCSEEEECSSSTTCCCTTCCCEEEECT
T ss_pred CcccccCHHHHHHHHHHc------CCEEEEEccccccCcC-------CChhhcCCCEEEecCcccCCCCCCCeEEEEECH
Confidence 999999999999999999 9999999999854332 2222225899999999998888888 9999875
Q ss_pred CCCCcccccc-ccCCCCCCC-------------CCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 293 KDDLPDELVF-HINYLGSDQ-------------PTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 293 ~~~~~~~~~~-~~~~~~~~~-------------~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
+ .. +.+.. ...|.+... ......+|.+....+++.++++.+..++++++.++..+++++|
T Consensus 244 ~-~~-~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 317 (416)
T 1qz9_A 244 Q-LC-DLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLF 317 (416)
T ss_dssp T-TT-TTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred H-HH-hccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 4 32 11110 011111100 0011235667766778888888876667777777777666654
No 50
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.89 E-value=4.7e-24 Score=203.84 Aligned_cols=255 Identities=11% Similarity=-0.068 Sum_probs=172.2
Q ss_pred cccccCCCChHHHHHHHHHHhcc---cCCC----cccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEE-eCChhHHHH
Q 018437 60 LASFVTTWMEPECDKLVMASINK---NYVD----MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG-TVGSSEAIM 131 (356)
Q Consensus 60 l~~~~~~~~~~~v~~~i~~~~~~---~~~~----~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~-t~Ggt~a~~ 131 (356)
|..-.|++.++.|.+++...+.. |+.. ...++.+.++.+++++.+++++|++++ ..+++ |+|||+++.
T Consensus 30 l~~agpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~----~evif~t~~~T~a~n 105 (386)
T 3qm2_A 30 NFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSN----YKVLFCHGGGRGQFA 105 (386)
T ss_dssp ECCSSSCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTT----EEEEEEESCTTHHHH
T ss_pred cccCCCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC----ceEEEEcCCchHHHH
Confidence 44555677788999998766532 2211 112345567777899999999999641 23677 689999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcch--HHHHHHhhCCeeEEEEec--CCccc-cCHHHHHHHHhhCceEE
Q 018437 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC--WEKFARYFEVELKEVKLE--EGYYV-MNPVKAVELVDENTICV 206 (356)
Q Consensus 132 ~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s--~~~~~~~~G~~v~~v~~~--~~~~~-~d~~~L~~~i~~~~~~v 206 (356)
+++..+..+ ++++++...+|++ +...++..| +++.++++ +. +. +|+++++++++++|++|
T Consensus 106 ~ai~~l~~~-------------gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~-G~~~~~~~~~~~l~~~t~lV 170 (386)
T 3qm2_A 106 GVPLNLLGD-------------KTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVD-GKRAVKPMREWQLSDNAAYL 170 (386)
T ss_dssp HHHHHHCTT-------------CCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEET-TEEEECCGGGCCCCTTCSCE
T ss_pred HHHHhccCC-------------CCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccC-CCCCCchHHHhhcCCCCcEE
Confidence 998876432 3555443333333 444556678 89999998 43 54 88888999999999999
Q ss_pred EEecCCCccccc-CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCe
Q 018437 207 AAILGSTLTGEF-EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV 285 (356)
Q Consensus 207 ~~~~~~~~tG~~-~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~ 285 (356)
.+++.+|.+|++ .|+++|+ + ++++|||++++.+.. ++|++.. |.+++++|||+ +|.|+
T Consensus 171 ~~~h~et~tG~~i~pi~~i~-----~------g~~~~vDa~qs~g~~-------pidv~~~--~~~~~s~hK~l-GP~G~ 229 (386)
T 3qm2_A 171 HYCPNETIDGIAIDETPDFG-----P------EVVVTADFSSTILSA-------PLDVSRY--GVIYAGAQKNI-GPAGL 229 (386)
T ss_dssp EECSEETTTTEECCCCCCCC-----T------TCCEEEECTTTTTSS-------CCCGGGC--SEEEEETTTTT-CCTTE
T ss_pred EEECCcCCcCEecCchhhhc-----C------CCEEEEEcccccCCC-------CCCcccc--CEEEEeccccc-CCCcc
Confidence 999999999995 9999986 7 999999999987666 3455433 45678999999 69999
Q ss_pred eEEEEeCCCCCccccccccCCCCC--CCCCccccCCCChhHHHHHHHHHHHhCHH-HHHHHHHHHHhccCccc
Q 018437 286 GWVVWRTKDDLPDELVFHINYLGS--DQPTFTLNFSKGSSQIIAQYYQFIRLGFE-EITFTFISSLKVCPFLV 355 (356)
Q Consensus 286 g~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~tr~~~~~~~~~~~l~~lg~~-G~~~~~~~~~~~a~~l~ 355 (356)
|++++|++... ......+.++.. ........+|.+...++++..+++.+-.+ |++++.++..+++++|.
T Consensus 230 g~l~v~~~~~~-~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~ 301 (386)
T 3qm2_A 230 TLVIVREDLLG-KAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLY 301 (386)
T ss_dssp EEEEEEGGGCS-CCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEEEECHHHHh-hhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 99999875321 110011112110 00111234788888899999999999888 89999999999988764
No 51
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.88 E-value=2.3e-21 Score=185.43 Aligned_cols=218 Identities=14% Similarity=0.055 Sum_probs=165.3
Q ss_pred cccccccCC-CChHHHHHHHHHHhccc----CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHH
Q 018437 58 LNLASFVTT-WMEPECDKLVMASINKN----YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (356)
Q Consensus 58 ~~l~~~~~~-~~~~~v~~~i~~~~~~~----~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~ 132 (356)
++|..+.+. ++++.+.+++.+.+... ...|....+..++++++.+++++.+|.+.+. ..+++|+||++++..
T Consensus 38 i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~---~~i~~~~g~~~al~~ 114 (398)
T 3ele_A 38 YDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNA---DNLYMTMGAAASLSI 114 (398)
T ss_dssp EECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCG---GGEEEESSHHHHHHH
T ss_pred EEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCCh---HHEEEccCHHHHHHH
Confidence 345444444 34578888888777542 2344455677899999999999999975422 458999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCC-CeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecC
Q 018437 133 AGLAFKRKWQQKRKEQGKPYDK-PNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILG 211 (356)
Q Consensus 133 al~~~~~~~~~~~~~~g~~~~~-~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~ 211 (356)
++.++.++ + ++|+++.++|..+...++..|++++.+|++++++.+|+++|++++++++++|++++|
T Consensus 115 ~~~~l~~~-------------g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p 181 (398)
T 3ele_A 115 CFRALTSD-------------AYDEFITIAPYFPEYKVFVNAAGARLVEVPADTEHFQIDFDALEERINAHTRGVIINSP 181 (398)
T ss_dssp HHHHHCCS-------------TTCEEEEESSCCTHHHHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEEECSS
T ss_pred HHHHHcCC-------------CCCEEEEeCCCchhhHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCcCCCEEEEcCC
Confidence 99887542 5 789999999999999999999999999998655899999999999989999999999
Q ss_pred CCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCC-CCcCeeE
Q 018437 212 STLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGW 287 (356)
Q Consensus 212 ~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~-~P~g~g~ 287 (356)
+||||.+.+ +++|.++|++++++++.++++|+|++|+.+... ....+........+.+..+++|+++ .+.++|+
T Consensus 182 ~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 259 (398)
T 3ele_A 182 NNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYD--GIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGY 259 (398)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCT--TCCCCCGGGTCSSEEEEEESTTTSSCTTTCCEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccC--CCCcCChHhhcCCeEEEEehhhcCCCccceeEE
Confidence 999999977 677778999811111119999999999875541 1111122223355677888999986 5577999
Q ss_pred EEEeCC
Q 018437 288 VVWRTK 293 (356)
Q Consensus 288 l~~~~~ 293 (356)
++.+++
T Consensus 260 ~~~~~~ 265 (398)
T 3ele_A 260 VLVPDE 265 (398)
T ss_dssp EECCTT
T ss_pred EEEcch
Confidence 987654
No 52
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.88 E-value=1.3e-21 Score=186.59 Aligned_cols=211 Identities=12% Similarity=0.019 Sum_probs=160.6
Q ss_pred ccccccCC-CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCC-eEEeCChhHHHHHHHHH
Q 018437 59 NLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAV-GVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 59 ~l~~~~~~-~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~-~~~t~Ggt~a~~~al~~ 136 (356)
+|..+.+. ++++.+.+++.+.++.....|....+..++++++.+++.+.+|++.+. .. +++|+||++++..++.+
T Consensus 30 ~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~---~~~v~~~~g~~~a~~~~~~~ 106 (389)
T 1gd9_A 30 SLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADP---KTEIMVLLGANQAFLMGLSA 106 (389)
T ss_dssp ECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCT---TTSEEEESSTTHHHHHHHTT
T ss_pred ecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC---CCeEEEcCChHHHHHHHHHH
Confidence 44444443 245788888887776443344444567899999999999888965321 35 89999999999999887
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEEecCCCcc
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLT 215 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (356)
+.++ +++|+++.++|+++...++..|++++.+|+++ +++.+|+++|++++++++++|++++++|||
T Consensus 107 ~~~~-------------gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~npt 173 (389)
T 1gd9_A 107 FLKD-------------GEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPT 173 (389)
T ss_dssp TCCT-------------TCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTT
T ss_pred hCCC-------------CCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcCcCceEEEEECCCCCC
Confidence 6432 57899999999999999999999999999975 237899999999998889999999999999
Q ss_pred cccC---CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCCCC-cCeeEEEE
Q 018437 216 GEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVY-AGVGWVVW 290 (356)
Q Consensus 216 G~~~---~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~P-~g~g~l~~ 290 (356)
|.+. ++++|.++|+++ |+++|+|++|+++...--.......+. ..+.|.+..++||+++.| ..+|+++.
T Consensus 174 G~~~~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 247 (389)
T 1gd9_A 174 GAVLTKKDLEEIADFVVEH------DLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAA 247 (389)
T ss_dssp CCCCCHHHHHHHHHHHHHT------TCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEEC
T ss_pred CcCCCHHHHHHHHHHHHHc------CCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEE
Confidence 9986 599999999999 999999999987654100000011221 235789999999987422 34799987
Q ss_pred e
Q 018437 291 R 291 (356)
Q Consensus 291 ~ 291 (356)
+
T Consensus 248 ~ 248 (389)
T 1gd9_A 248 P 248 (389)
T ss_dssp C
T ss_pred C
Confidence 5
No 53
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.88 E-value=8.5e-22 Score=187.64 Aligned_cols=207 Identities=14% Similarity=0.064 Sum_probs=158.8
Q ss_pred cccccccCC-CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 58 LNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 58 ~~l~~~~~~-~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
++|....+. ++++.+.+++.+.+......+.. +..++++++++++++.+|.+.+ ...+++|+||++|+..++.+
T Consensus 35 i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~--~~~~~~~~l~~~l~~~~g~~~~---~~~v~~~~g~~~a~~~~~~~ 109 (391)
T 4dq6_A 35 LPMWVADMDFKAAPCIIDSLKNRLEQEIYGYTT--RPDSYNESIVNWLYRRHNWKIK---SEWLIYSPGVIPAISLLINE 109 (391)
T ss_dssp EECCSSSCSSCCCHHHHHHHHHHHTTCCCCCBC--CCHHHHHHHHHHHHHHHCCCCC---GGGEEEESCHHHHHHHHHHH
T ss_pred eeccccCCCCCCCHHHHHHHHHHHhCCCCCCCC--CCHHHHHHHHHHHHHHhCCCCc---HHHeEEcCChHHHHHHHHHH
Confidence 344444333 34578999998888654434433 4478899999999999995431 13589999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec--C-CccccCHHHHHHHHhhCceEEEEecCCC
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE--E-GYYVMNPVKAVELVDENTICVAAILGST 213 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~--~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (356)
+.++ +++|+++.++|.++...++..|++++.+|++ + +++.+|+++|++++++ +++|++++|+|
T Consensus 110 ~~~~-------------gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~n 175 (391)
T 4dq6_A 110 LTKA-------------NDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHN 175 (391)
T ss_dssp HSCT-------------TCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBT
T ss_pred hCCC-------------CCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCC
Confidence 7432 5799999999999999999999999999987 2 3478999999999988 99999999999
Q ss_pred ccccc---CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCC-----CceEEEEcCCcCCC-CCcC
Q 018437 214 LTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLP-----LVKSINVSGHKYGL-VYAG 284 (356)
Q Consensus 214 ~tG~~---~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~-----~~Ds~~~~~hK~l~-~P~g 284 (356)
|||.+ +++++|.++|+++ ++++|+|++|+++... +.....+... ....+..++||+++ .+.+
T Consensus 176 ptG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~---g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r 246 (391)
T 4dq6_A 176 PVGRVWTKDELKKLGDICLKH------NVKIISDEIHSDIILK---KHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQ 246 (391)
T ss_dssp TTTBCCCHHHHHHHHHHHHHT------TCEEEEECTTTTCBCT---TCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGC
T ss_pred CCCcCcCHHHHHHHHHHHHHc------CCEEEeeccccccccC---CCCccCHHHcCccccCcEEEEEechhhccCcccc
Confidence 99999 7789999999999 9999999999875441 1111122111 23367788999874 4567
Q ss_pred eeEEEEeC
Q 018437 285 VGWVVWRT 292 (356)
Q Consensus 285 ~g~l~~~~ 292 (356)
+|+++.++
T Consensus 247 ~G~~~~~~ 254 (391)
T 4dq6_A 247 SSYVVLPD 254 (391)
T ss_dssp CEEEECCS
T ss_pred eEEEEeCC
Confidence 89888764
No 54
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.88 E-value=1.9e-21 Score=186.77 Aligned_cols=212 Identities=12% Similarity=0.025 Sum_probs=160.7
Q ss_pred CCCCcccccccC---C-CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHH
Q 018437 54 GNPRLNLASFVT---T-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEA 129 (356)
Q Consensus 54 ~~~~~~l~~~~~---~-~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a 129 (356)
++..++|..+.+ . ++++.+.+++.+.+......|....+..++++++.+++.+.+|++.+. ..+++|+||++|
T Consensus 37 g~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~---~~v~~t~g~~~a 113 (406)
T 1xi9_A 37 GIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITP---DDVRVTAAVTEA 113 (406)
T ss_dssp TCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCG---GGEEEESHHHHH
T ss_pred CCCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCH---HHEEEcCChHHH
Confidence 333344544444 2 235778888877775433344444567899999999999988876422 458999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEE
Q 018437 130 IMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAA 208 (356)
Q Consensus 130 ~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~ 208 (356)
+..++.++..+ +++|+++.++|.++...++..|++++.+|+++ +++.+|+++|++++++++++|++
T Consensus 114 l~~~~~~l~~~-------------gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i 180 (406)
T 1xi9_A 114 LQLIFGALLDP-------------GDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAV 180 (406)
T ss_dssp HHHHHHHHCCT-------------TCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEE
T ss_pred HHHHHHHhCCC-------------CCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCcCceEEEE
Confidence 99999887432 57899999999999999999999999999975 34789999999999888999999
Q ss_pred ecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCC-cccccCCCc-eEEEEcCCcCCC-CC
Q 018437 209 ILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWDFRLPLV-KSINVSGHKYGL-VY 282 (356)
Q Consensus 209 ~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~-Ds~~~~~hK~l~-~P 282 (356)
++++||||.+.| +++|.++|+++ |+++|+|++|+++... .... ...+. .+. |.++.++||+++ ..
T Consensus 181 ~~p~nptG~~~~~~~l~~i~~~a~~~------~~~li~De~~~~~~~~--~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G 251 (406)
T 1xi9_A 181 INPNNPTGALYDKKTLEEILNIAGEY------EIPVISDEIYDLMTYE--GEHISPGSLT-KDVPVIVMNGLSKVYFATG 251 (406)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHH------TCCEEEECTTTTCBSS--SCCCCHHHHC-SSSCEEEEEESTTTTCCGG
T ss_pred ECCCCCCCCCcCHHHHHHHHHHHHHc------CCEEEEEcCccccccC--CCCCCHHHcC-CCceEEEEeccccccCCCc
Confidence 999999999865 99999999999 9999999999875431 1100 11111 345 778889999985 22
Q ss_pred cCeeEEEE
Q 018437 283 AGVGWVVW 290 (356)
Q Consensus 283 ~g~g~l~~ 290 (356)
..+|++++
T Consensus 252 ~r~G~~~~ 259 (406)
T 1xi9_A 252 WRLGYMYF 259 (406)
T ss_dssp GCCEEEEE
T ss_pred cEEEEEEE
Confidence 34899883
No 55
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.88 E-value=8.4e-22 Score=189.61 Aligned_cols=207 Identities=13% Similarity=0.066 Sum_probs=160.7
Q ss_pred ccccccCC-CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCC-CeEEeCChhHHHHHHHHH
Q 018437 59 NLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTA-VGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 59 ~l~~~~~~-~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~-~~~~t~Ggt~a~~~al~~ 136 (356)
+|..+.++ .+++.+.+++.+.++.....|....+..++++++.+++.+.+|++.+. . .+++|+||++|+..++.+
T Consensus 29 ~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~---~~~v~~t~g~~~al~~~~~~ 105 (411)
T 2o0r_A 29 NLGQGFPDEDGPPKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDP---ETEVLVTVGATEAIAAAVLG 105 (411)
T ss_dssp ESSCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCT---TTSEEEEEHHHHHHHHHHHH
T ss_pred eccCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCC---CceEEEeCCHHHHHHHHHHH
Confidence 34443333 345788888888776433344445567899999999999998975321 2 589999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCC--ccccCHHHHHHHHhhCceEEEEecCCCc
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG--YYVMNPVKAVELVDENTICVAAILGSTL 214 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~--~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (356)
+.++ +++|+++.++|.++...++..|++++.+|++++ ++.+|+++|++++++++++|++++++||
T Consensus 106 ~~~~-------------gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~~~np 172 (411)
T 2o0r_A 106 LVEP-------------GSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNP 172 (411)
T ss_dssp HCCT-------------TCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCTTEEEEEEESSCTT
T ss_pred hcCC-------------CCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhccCceEEEEeCCCCC
Confidence 7432 578999999999999999999999999998753 4789999999999888999999999999
Q ss_pred ccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccc---c-CCCceEEEEcCCcCCCCCcC--e
Q 018437 215 TGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF---R-LPLVKSINVSGHKYGLVYAG--V 285 (356)
Q Consensus 215 tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~---~-~~~~Ds~~~~~hK~l~~P~g--~ 285 (356)
||.+.| +++|.++|+++ |+++++|++|+++... ......+ . ..+.|.+..++||+++ +.| +
T Consensus 173 tG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~ 242 (411)
T 2o0r_A 173 TGAVLSATELAAIAEIAVAA------NLVVITDEVYEHLVFD---HARHLPLAGFDGMAERTITISSAAKMFN-CTGWKI 242 (411)
T ss_dssp TCCCCCHHHHHHHHHHHHHT------TCEEEEECTTTTCBCT---TCCCCCGGGSTTTGGGEEEEEEHHHHTT-CTTTCE
T ss_pred CCCCCCHHHHHHHHHHHHHc------CCEEEEEccccccccC---CCCCcChhhccCCCCCEEEEeechhhcC-CccceE
Confidence 999865 58999999999 9999999999876541 1111111 1 1467999999999874 445 8
Q ss_pred eEEEEe
Q 018437 286 GWVVWR 291 (356)
Q Consensus 286 g~l~~~ 291 (356)
|+++.+
T Consensus 243 G~~~~~ 248 (411)
T 2o0r_A 243 GWACGP 248 (411)
T ss_dssp EEEECC
T ss_pred EEEeeC
Confidence 999874
No 56
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.88 E-value=3.7e-21 Score=183.70 Aligned_cols=224 Identities=14% Similarity=0.055 Sum_probs=162.1
Q ss_pred HHHHHHHHHHhhhcCCCCcccccccCCC-ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCC
Q 018437 40 EAAYQVINDELMLDGNPRLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTA 118 (356)
Q Consensus 40 ~~i~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~ 118 (356)
.++.+..++. ..+++..++|..+.+.. +++.+.+++.+.+......|....+..++++++.+++.+.+|++.+. .
T Consensus 17 ~~~~~~~~~~-~~~g~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~---~ 92 (391)
T 3h14_A 17 MDVMEAARRA-EEAGRRIIHMEVGQPGTGAPRGAVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDP---G 92 (391)
T ss_dssp HHHHHHHHHH-HHTTCCCEECCCSSCSSCSCHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCCG---G
T ss_pred HHHHHHHHHH-HhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCCH---H
Confidence 3444443332 23444445565555544 35788999888876544445555567889999999999998965422 4
Q ss_pred CeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCC-ccccCHHHHHH
Q 018437 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVE 197 (356)
Q Consensus 119 ~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~ 197 (356)
.+++|+||++|+..++.++.++ +++|+++.++|..+...++..|++++.+|++++ ++.+|+++|++
T Consensus 93 ~v~~t~g~~~al~~~~~~l~~~-------------gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 159 (391)
T 3h14_A 93 RVVITPGSSGGFLLAFTALFDS-------------GDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAG 159 (391)
T ss_dssp GEEEESSHHHHHHHHHHHHCCT-------------TCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTT
T ss_pred HEEEecChHHHHHHHHHHhcCC-------------CCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHh
Confidence 5899999999999998887542 578999999999999999999999999999753 36889999988
Q ss_pred HHhhCceEEEEecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEc
Q 018437 198 LVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVS 274 (356)
Q Consensus 198 ~i~~~~~~v~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~ 274 (356)
+ ++++|++++++||||.+.| +++|.++|+++ ++++|+|++|+.+... ............+.+..+
T Consensus 160 ~---~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~---~~~~~~~~~~~~~i~~~s 227 (391)
T 3h14_A 160 L---DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQ------GASFISDEIYHGIEYE---AKAVTALELTDECYVINS 227 (391)
T ss_dssp S---CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHT------TCEEEEECTTTTCBSS---SCCCCGGGTCSSSEEEEE
T ss_pred c---CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHc------CCEEEEECcchhcccC---CCCcChhhcCCCEEEEEe
Confidence 7 7889999999999999977 88899999999 9999999999875541 111111112344566778
Q ss_pred CCcCCC-CCcCeeEEEEeC
Q 018437 275 GHKYGL-VYAGVGWVVWRT 292 (356)
Q Consensus 275 ~hK~l~-~P~g~g~l~~~~ 292 (356)
.+|+++ .+.++|+++.++
T Consensus 228 ~sK~~g~~G~r~G~~~~~~ 246 (391)
T 3h14_A 228 FSKYFSMTGWRVGWMVVPE 246 (391)
T ss_dssp SSSTTCCTTSCCEEEECCG
T ss_pred chhccCCccceeEEEEeCH
Confidence 999985 556789888643
No 57
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.88 E-value=8.1e-22 Score=187.97 Aligned_cols=201 Identities=12% Similarity=-0.006 Sum_probs=157.6
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCC-CeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTA-VGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~-~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+++.+.+++.+.++.....|....+..++++++.+++.+.+|.+.+. . .+++|+||++++..++.++..+
T Consensus 44 ~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~---~~~v~~~~g~~~a~~~~~~~~~~~------ 114 (386)
T 1u08_A 44 GPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDA---DSDITVTAGATEALYAAITALVRN------ 114 (386)
T ss_dssp CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCT---TTTEEEESSHHHHHHHHHHHHCCT------
T ss_pred CCHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCCC---CCCEEEcCChHHHHHHHHHHhCCC------
Confidence 45788888888776433344444567899999999999988975321 3 5899999999999999887432
Q ss_pred hcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCC---HHH
Q 018437 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKL 223 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---i~~ 223 (356)
+++|+++.++|+.+...++..|++++.+|++++++.+|+++|++++++++++|++++++||||.+.| +++
T Consensus 115 -------gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~ 187 (386)
T 1u08_A 115 -------GDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAA 187 (386)
T ss_dssp -------TCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred -------CCEEEEeCCCchhHHHHHHHcCCEEEEeecCcccCcCCHHHHHHhhcccCEEEEEeCCCCCCCccCCHHHHHH
Confidence 4789999999999999999999999999997645889999999999888999999999999999865 688
Q ss_pred HHHHHHHhhhccCCCCcEEEecccccccccccCCCCcc-ccc-CCCceEEEEcCCcCCCCCcC--eeEEEEeC
Q 018437 224 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFR-LPLVKSINVSGHKYGLVYAG--VGWVVWRT 292 (356)
Q Consensus 224 I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~-~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~ 292 (356)
|.++|+++ ++++|+|++|+.+...- .+...+ .+. ..+.|.+..++||+++ +.| +|+++.++
T Consensus 188 i~~~~~~~------~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~ 252 (386)
T 1u08_A 188 LWQAIAGH------EIFVISDEVYEHINFSQ-QGHASVLAHPQLRERAVAVSSFGKTYH-MTGWKVGYCVAPA 252 (386)
T ss_dssp HHHHHTTS------CCEEEEECTTTTCBCCS-SCCCCGGGSHHHHTTEEEEEEHHHHTT-CGGGCCEEEECCH
T ss_pred HHHHHHHc------CcEEEEEccccccccCC-CCCcChhcccCccCcEEEEecchhhcC-CcccceEEEEcCH
Confidence 99999999 99999999998754310 011111 121 2367899999999875 344 89998753
No 58
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.87 E-value=4.2e-21 Score=183.48 Aligned_cols=215 Identities=15% Similarity=0.013 Sum_probs=164.4
Q ss_pred CCCCcccccccCC-CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHH
Q 018437 54 GNPRLNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (356)
Q Consensus 54 ~~~~~~l~~~~~~-~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~ 132 (356)
++..++|....+. ++++.+.+++.+.+......|...++..++++++.+++.+.+|++.+. ..+++|+||++++..
T Consensus 40 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~---~~v~~~~g~t~al~~ 116 (389)
T 1o4s_A 40 GEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISP---DQVVVTNGAKQALFN 116 (389)
T ss_dssp TCCCEECCCSSCSSCCCHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCG---GGEEEESHHHHHHHH
T ss_pred CCCEEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCH---HHEEEecCHHHHHHH
Confidence 3333445444443 235788888888876543344444577899999999999888975311 358999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEEecC
Q 018437 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILG 211 (356)
Q Consensus 133 al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~ 211 (356)
++.++..+ +++|+++.++|.++...++..|++++.+|+++ +++.+|+++|++++++++++|+++++
T Consensus 117 ~~~~l~~~-------------gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p 183 (389)
T 1o4s_A 117 AFMALLDP-------------GDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSP 183 (389)
T ss_dssp HHHHHCCT-------------TCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESS
T ss_pred HHHHhCCC-------------CCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccCceEEEEcCC
Confidence 99887432 47899999999999999999999999999975 24789999999999888999999999
Q ss_pred CCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCCCCcC--e
Q 018437 212 STLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAG--V 285 (356)
Q Consensus 212 ~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~P~g--~ 285 (356)
+||||.+.| +++|.++|+++ |+++++|++|+.+...- .......+. ..+.|.+..++||+++ +.| +
T Consensus 184 ~nptG~~~~~~~l~~l~~~~~~~------~~~li~Dea~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~ 255 (389)
T 1o4s_A 184 NNPTGVVYRREFLEGLVRLAKKR------NFYIISDEVYDSLVYTD-EFTSILDVSEGFDRIVYINGFSKSHS-MTGWRV 255 (389)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHH------TCEEEEECTTTTSBCSS-CCCCHHHHCSSSTTEEEEEESTTTTT-CGGGCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHc------CCEEEEEccccccccCC-CCCCHhhcCCCCCcEEEEeechhhcC-Ccccce
Confidence 999999966 99999999999 99999999998765410 000011221 2468999999999984 344 8
Q ss_pred eEEEEeC
Q 018437 286 GWVVWRT 292 (356)
Q Consensus 286 g~l~~~~ 292 (356)
|+++.++
T Consensus 256 G~l~~~~ 262 (389)
T 1o4s_A 256 GYLISSE 262 (389)
T ss_dssp EEEECCH
T ss_pred EEEEeCH
Confidence 9998753
No 59
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.87 E-value=5e-21 Score=185.35 Aligned_cols=230 Identities=12% Similarity=-0.031 Sum_probs=172.3
Q ss_pred HHHHHHHHHHHhhhcCCCCcccccccCCC-ChHHHHHHHHHHhcccC-CCcccCcchHHHHHHHHHHHHHHhCCCCCCCC
Q 018437 39 KEAAYQVINDELMLDGNPRLNLASFVTTW-MEPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADDK 116 (356)
Q Consensus 39 ~~~i~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~v~~~i~~~~~~~~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~ 116 (356)
..++..........+++..++|..+.+.. +++.+.+++.+.+..+. ..|....+..++++++.+++.+.+|++.+.
T Consensus 28 ~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~-- 105 (437)
T 3g0t_A 28 IRDLVALVTNLEKATGTKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPA-- 105 (437)
T ss_dssp HHHHHHHHHHHHHHHTCCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCG--
T ss_pred HHHHHHHHHHHHHhcCCCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCc--
Confidence 34444444433333444445555555443 45788888888776433 444444566889999999999888876422
Q ss_pred CCCeEEeCChhHHHHHHHHHHH--HHHHHHHHhcCCCCCCC--eEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCH
Q 018437 117 TAVGVGTVGSSEAIMLAGLAFK--RKWQQKRKEQGKPYDKP--NIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNP 192 (356)
Q Consensus 117 ~~~~~~t~Ggt~a~~~al~~~~--~~~~~~~~~~g~~~~~~--~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~ 192 (356)
..+++|+||++++..++.++. .+ ++ +|+++.++|.++...++..|++++.+|++++++.+|+
T Consensus 106 -~~i~~t~g~t~al~~~~~~l~~~~~-------------gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~ 171 (437)
T 3g0t_A 106 -RACVPTVGSMQGCFVSFLVANRTHK-------------NREYGTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKLR 171 (437)
T ss_dssp -GGEEEESHHHHHHHHHHHHHTTSCT-------------TCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGGGGCTTHHH
T ss_pred -ccEEEeCCHHHHHHHHHHHHhcCCC-------------CCccEEEEeCCCcHhHHHHHHHcCCEEEEEeecCCCCccCH
Confidence 458999999999999998875 32 46 8999999999999999999999999999755578999
Q ss_pred HHHHHHH-hhCceEEEEecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCc-------c
Q 018437 193 VKAVELV-DENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-------W 261 (356)
Q Consensus 193 ~~L~~~i-~~~~~~v~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-------~ 261 (356)
++|++++ ++++++|++++|+||||.+.+ +++|.++|+++ |+++|+|++|+.+... ..... .
T Consensus 172 ~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~------~~~li~De~~~~~~~~--~~~~~~~~~~~~~ 243 (437)
T 3g0t_A 172 EKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKH------DVIVIEDLAYFGMDFR--KDYSHPGEPLYQP 243 (437)
T ss_dssp HHHHHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHT------TCEEEEECTTTTCCTT--SCCCSTTSSCCCC
T ss_pred HHHHHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHC------CcEEEEEcchhhcccC--CCcCcccccchhh
Confidence 9999999 678999999999999999976 77789999999 9999999999875542 11001 1
Q ss_pred ccc-CCCceEEEEcCCcCCC-CCcCeeEEEEeC
Q 018437 262 DFR-LPLVKSINVSGHKYGL-VYAGVGWVVWRT 292 (356)
Q Consensus 262 ~~~-~~~~Ds~~~~~hK~l~-~P~g~g~l~~~~ 292 (356)
.+. ..+.+.+..++||+++ .+.++|+++.++
T Consensus 244 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 276 (437)
T 3g0t_A 244 SVANYTDNYILALSSSKAFSYAGQRIGVLMISG 276 (437)
T ss_dssp CGGGTCSCEEEEEESTTTTSCGGGCCEEEEECH
T ss_pred ccCCCCCcEEEEEcCccCCCCccceeEEEEECH
Confidence 222 2466788889999975 456689998753
No 60
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.87 E-value=2e-21 Score=187.80 Aligned_cols=262 Identities=11% Similarity=0.007 Sum_probs=181.1
Q ss_pred ccccccCC-CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHH
Q 018437 59 NLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF 137 (356)
Q Consensus 59 ~l~~~~~~-~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~ 137 (356)
+++...+. +.+|.+.+++.+.+......|... ..++++++++++++.+|++.+ ...+++|+|+++|+..++.++
T Consensus 65 ~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~l~~~l~~~~g~~~~---~~~v~~~~g~~ea~~~a~~~~ 139 (421)
T 3l8a_A 65 QMWVADMDFLPVPEIKEAIINYGREHIFGYNYF--NDDLYQAVIDWERKEHDYAVV---KEDILFIDGVVPAISIALQAF 139 (421)
T ss_dssp ECCSSCCCSCCCHHHHHHHHHHHHHCCSSCBCC--CHHHHHHHHHHHHHHHCCCCC---GGGEEEESCHHHHHHHHHHHH
T ss_pred ecccCCCCCCCCHHHHHHHHHHHhcCCcCCCCC--CHHHHHHHHHHHHHHhCCCCC---HHHEEEcCCHHHHHHHHHHHh
Confidence 44433333 345788898888776543344333 278889999999999996532 145899999999999999987
Q ss_pred HHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec--CCccccCHHHHHHHHh-hCceEEEEecCCCc
Q 018437 138 KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE--EGYYVMNPVKAVELVD-ENTICVAAILGSTL 214 (356)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~--~~~~~~d~~~L~~~i~-~~~~~v~~~~~~~~ 214 (356)
..+ +++|+++.++|..+...++..|.+++.+|++ +.++.+|+++|+++++ +++++|++++++||
T Consensus 140 ~~~-------------gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~np 206 (421)
T 3l8a_A 140 SEK-------------GDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNP 206 (421)
T ss_dssp SCT-------------EEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTT
T ss_pred cCC-------------CCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCC
Confidence 532 4689999999999999999999999999986 3347899999999998 68999999999999
Q ss_pred cccc---CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc--CCCceEEEEcCCcCCC-CCcCeeEE
Q 018437 215 TGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPLVKSINVSGHKYGL-VYAGVGWV 288 (356)
Q Consensus 215 tG~~---~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~Ds~~~~~hK~l~-~P~g~g~l 288 (356)
+|.+ +++++|.++|+++ |+++|+|++|+++...--....-..+. ..+.+.+..+++|+++ ...++|++
T Consensus 207 tG~~~~~~~l~~l~~l~~~~------~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~ 280 (421)
T 3l8a_A 207 GGRVWDNDDLIKIAELCKKH------GVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFA 280 (421)
T ss_dssp TTBCCCHHHHHHHHHHHHHH------TCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEE
T ss_pred CCCcCCHHHHHHHHHHHHHc------CCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeE
Confidence 9998 7899999999999 999999999987654210000001111 1245577788999985 45677999
Q ss_pred EEeCCCCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 289 VWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
+.++++.. +.+........ .++.+....+++.++++. +.+.++++.++..++.++|
T Consensus 281 ~~~~~~l~-~~~~~~~~~~~--------~~~~n~~~~~a~~aal~~-~~~~~~~~~~~~~~~~~~l 336 (421)
T 3l8a_A 281 IIQNESLR-RKFQYRQLANN--------QHEVPTVGMIATQAAFQY-GKPWLEELKTVIEGNIKLV 336 (421)
T ss_dssp ECCSHHHH-HHHHHHHHHTT--------CSCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHH
T ss_pred EcCCHHHH-HHHHHHHHhcc--------cCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHH
Confidence 88643332 11111000000 022333335555555553 5555666666666555544
No 61
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.87 E-value=1.8e-21 Score=185.58 Aligned_cols=230 Identities=8% Similarity=-0.024 Sum_probs=170.5
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchH--
Q 018437 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCW-- 167 (356)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~-- 167 (356)
++...++.+++++.+++++|.+. ..++|+|||+|+..++..+ . .+++|+++.++|++.
T Consensus 30 ~~~~~~~~~~~~~~l~~~~~~~~------~v~~~~sgt~a~~~~~~~~-~-------------~gd~vi~~~~~~~~~~~ 89 (379)
T 3ke3_A 30 SKAFQEVMNDLLSNLKTVYNAEA------AVIIPGSGTYGMEAVARQL-T-------------IDEDCLIIRNGWFSYRW 89 (379)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCSE------EEEEESCHHHHHHHHHHHH-C-------------TTCEEEEEECSHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCCC------EEEEcCChhHHHHHHHHhC-C-------------CCCeEEEEeCCchhHHH
Confidence 55667888899999999999872 3788999999999876443 1 157899998888764
Q ss_pred HHHHHhhCC--eeEEEEecCC-------c-cccCHHHHHHHHh-hCceEEEEecCCCcccccCC---HHHHHHHHHHhhh
Q 018437 168 EKFARYFEV--ELKEVKLEEG-------Y-YVMNPVKAVELVD-ENTICVAAILGSTLTGEFED---VKLLHDLLTKKNE 233 (356)
Q Consensus 168 ~~~~~~~G~--~v~~v~~~~~-------~-~~~d~~~L~~~i~-~~~~~v~~~~~~~~tG~~~~---i~~I~~i~~~~~~ 233 (356)
...++..|+ +++.++++.. . ..+|+++|++++. +++++|++++++|++|.+.| +++|.++|+++
T Consensus 90 ~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~-- 167 (379)
T 3ke3_A 90 TQILEKGKFAKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSV-- 167 (379)
T ss_dssp HHHHHHHCCSSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHT--
T ss_pred HHHHHHhCCCCceEEEeccccccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHc--
Confidence 345555664 6788887531 1 2689999999996 48999999999999999999 99999999999
Q ss_pred ccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCcccccc--ccCCCCC--
Q 018437 234 ETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF--HINYLGS-- 309 (356)
Q Consensus 234 ~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~--~~~~~~~-- 309 (356)
|+++|+|++++ +..+ +++...++|.++.++||++++|.|+|+++++++ .. +.+.. ...+...
T Consensus 168 ----~~~li~D~~~~-g~~~-------~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~-~~-~~l~~~~~~~~~~~~~ 233 (379)
T 3ke3_A 168 ----GGLLVIDCIAS-GCVW-------LDMKELGIDVLISAPQKGWSSTPCAGLVMLSAA-AI-KKVESTESNCFSLDLK 233 (379)
T ss_dssp ----TCEEEEECTTC-TTCC-------CCHHHHTCSEEEECTTTTTCSCCCEEEEEECHH-HH-HHHHTCCCSCSTTCHH
T ss_pred ----CCEEEEEeccc-CCcc-------ccccccCCCEEEecchhhcCCCCceEEEEECHH-HH-HhhhcCCCCceeecHH
Confidence 99999999987 4332 233333789999999999999999999998753 21 11110 0111110
Q ss_pred ---------CCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 310 ---------DQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 310 ---------~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
........+|.+...++++.++++.+..+|++++.++..+++++|.
T Consensus 234 ~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~ 288 (379)
T 3ke3_A 234 QWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVR 288 (379)
T ss_dssp HHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHH
Confidence 0000112357778778888899998888889999998888887763
No 62
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.87 E-value=1.9e-21 Score=182.82 Aligned_cols=195 Identities=11% Similarity=-0.027 Sum_probs=152.7
Q ss_pred CCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (356)
.+++++.+.+++.+.+.. +....+...+++++++++++++|.++ ..+++|+||++|+..++.+++++
T Consensus 23 ~~~~~~~v~~a~~~~~~~----~~~~~g~~~~~~~~~~~l~~~~g~~~-----~~v~~~~g~t~a~~~~~~~~~~~---- 89 (359)
T 1svv_A 23 SVGMHPKILDLMARDNMT----QHAGYGQDSHCAKAARLIGELLERPD-----ADVHFISGGTQTNLIACSLALRP---- 89 (359)
T ss_dssp SSCCCHHHHHHHHHHTTC----CCCSTTCSHHHHHHHHHHHHHHTCTT-----SEEEEESCHHHHHHHHHHHHCCT----
T ss_pred cCCCCHHHHHHHHHHHhh----ccccccccHHHHHHHHHHHHHhCCCC-----ccEEEeCCchHHHHHHHHHHhCC----
Confidence 335668899998888753 22233556788899999999999765 34899999999999999987542
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHH--HHHhhCCeeEEEEecCCccccCHHHHHHHHhhC-------ceEEEEecCCCcc
Q 018437 145 RKEQGKPYDKPNIVTGANVQVCWEK--FARYFEVELKEVKLEEGYYVMNPVKAVELVDEN-------TICVAAILGSTLT 215 (356)
Q Consensus 145 ~~~~g~~~~~~~vi~s~~~h~s~~~--~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~-------~~~v~~~~~~~~t 215 (356)
+++|+++.++|+++.. .++..|++++.+|.+ ++.+|+++|+++++++ +++|+++++ |||
T Consensus 90 ---------gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~pt 157 (359)
T 1svv_A 90 ---------WEAVIATQLGHISTHETGAIEATGHKVVTAPCP--DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEV 157 (359)
T ss_dssp ---------TEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT--TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTT
T ss_pred ---------CCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC--CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCC
Confidence 4699999999999888 478889999999986 4899999999999876 889999988 689
Q ss_pred cccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 216 GEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 216 G~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
|.+.| +++|.++|+++ |+++|+|++|.++..... +.....+. ...+|++++++||++ +|.|+|+++++
T Consensus 158 G~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~d~~~~s~~K~g-~~~~~g~l~~~ 229 (359)
T 1svv_A 158 GTQYTKQELEDISASCKEH------GLYLFLDGARLASALSSP-VNDLTLADIARLTDMFYIGATKAG-GMFGEALIILN 229 (359)
T ss_dssp SCCCCHHHHHHHHHHHHHH------TCEEEEECTTHHHHHTST-TCCCCHHHHHHHCSEEEEECTTTT-CSSCEEEEECS
T ss_pred ceecCHHHHHHHHHHHHHh------CCEEEEEccchhhhhcCC-CcchhhhhhhhcCCEEEEecccCC-CCCceEEEEEc
Confidence 99988 89999999999 999999999965432211 10000000 025799999999985 68899999875
Q ss_pred C
Q 018437 292 T 292 (356)
Q Consensus 292 ~ 292 (356)
+
T Consensus 230 ~ 230 (359)
T 1svv_A 230 D 230 (359)
T ss_dssp G
T ss_pred c
Confidence 4
No 63
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.87 E-value=2.9e-21 Score=183.82 Aligned_cols=192 Identities=15% Similarity=0.045 Sum_probs=149.5
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
+++.+.+++.+.+.. ...|....+..+++ +.+++++|+++ ..+++|+||++++..++.++..+
T Consensus 39 ~~~~v~~a~~~~~~~-~~~y~~~~~~~~l~----~~la~~~~~~~-----~~v~~~~g~~~a~~~~~~~~~~~------- 101 (381)
T 1v2d_A 39 PPPFLLEAVRRALGR-QDQYAPPAGLPALR----EALAEEFAVEP-----ESVVVTSGATEALYVLLQSLVGP------- 101 (381)
T ss_dssp CCHHHHHHHHHHTTT-SCSCCCTTCCHHHH----HHHHHHHTSCG-----GGEEEESSHHHHHHHHHHHHCCT-------
T ss_pred CCHHHHHHHHHHHHH-hcCCCCCCCCHHHH----HHHHHhcCCCh-----hhEEEcCChHHHHHHHHHHhCCC-------
Confidence 457888888888764 22333333444444 45777788875 24899999999999999887432
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec--CCccccCHHHHHHHHhhCceEEEEecCCCcccccCC---HH
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE--EGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VK 222 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~--~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---i~ 222 (356)
+++|+++.++|.++...++..|++++.+|++ ++++.+|+++|++++++++++|++++++||||.+.| ++
T Consensus 102 ------gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~ 175 (381)
T 1v2d_A 102 ------GDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELE 175 (381)
T ss_dssp ------TCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHH
T ss_pred ------CCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcCcCCEEEEECCCCCCCCCccCHHHHH
Confidence 5789999999999999999999999999997 335899999999999888999999999999999865 89
Q ss_pred HHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc--CCCceEEEEcCCcCCCCC-cCeeEEEEeC
Q 018437 223 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPLVKSINVSGHKYGLVY-AGVGWVVWRT 292 (356)
Q Consensus 223 ~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~Ds~~~~~hK~l~~P-~g~g~l~~~~ 292 (356)
+|.++|+++ |+++|+|++|+++... ....++. ..+.|.+..++||+++.| ..+|+++.++
T Consensus 176 ~i~~~~~~~------~~~li~De~~~~~~~g----~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~ 238 (381)
T 1v2d_A 176 AIARLARAH------DLFLISDEVYDELYYG----ERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPK 238 (381)
T ss_dssp HHHHHHHHT------TCEEEEECTTTTCBSS----SCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCT
T ss_pred HHHHHHHHc------CCEEEEEcCccccccC----CCCCCHHHhcCCCEEEEeechhhcCCcccceEEEEeCH
Confidence 999999999 9999999999875431 1111111 347899999999987423 3489998753
No 64
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.87 E-value=1.4e-21 Score=190.46 Aligned_cols=213 Identities=12% Similarity=0.061 Sum_probs=164.7
Q ss_pred CCCCcccccccCCC-ChHHHHHHHHHHhcc-cCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHH
Q 018437 54 GNPRLNLASFVTTW-MEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIM 131 (356)
Q Consensus 54 ~~~~~~l~~~~~~~-~~~~v~~~i~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~ 131 (356)
++..++|+.+.+.. +++.+.+++.+.+.. ....|....+..++++++.+++.+.+|.+.+. ..+++|+||++|+.
T Consensus 56 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~---~~v~~t~G~~~al~ 132 (447)
T 3b46_A 56 GRELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKA---ENVTVTTGANEGIL 132 (447)
T ss_dssp TSCCEECCCCSCSSCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCG---GGEEEESHHHHHHH
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh---hhEEEeCCHHHHHH
Confidence 33445666655543 357888988888764 23345455577889999999998888875421 35899999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCC-----------ccccCHHHHHHHHh
Q 018437 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-----------YYVMNPVKAVELVD 200 (356)
Q Consensus 132 ~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-----------~~~~d~~~L~~~i~ 200 (356)
.++.++.++ +++|+++.++|..+...++..|++++.+|++++ ++.+|+++|+++++
T Consensus 133 ~~~~~l~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 199 (447)
T 3b46_A 133 SCLMGLLNA-------------GDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAIT 199 (447)
T ss_dssp HHHHHHCCT-------------TCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCC
T ss_pred HHHHHHcCC-------------CCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhc
Confidence 999887542 579999999999999999999999999998753 47899999999998
Q ss_pred hCceEEEEecCCCccccc---CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCc-ccc--cCCCceEEEEc
Q 018437 201 ENTICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDF--RLPLVKSINVS 274 (356)
Q Consensus 201 ~~~~~v~~~~~~~~tG~~---~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~--~~~~~Ds~~~~ 274 (356)
+++++|++++|+||||.+ +++++|.++|+++ ++++++|++|+.+... .+... ..+ ...+.|.+..+
T Consensus 200 ~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~------~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~~~i~i~S 271 (447)
T 3b46_A 200 SKTKAVIINTPHNPIGKVFTREELTTLGNICVKH------NVVIISDEVYEHLYFT--DSFTRIATLSPEIGQLTLTVGS 271 (447)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT------TCEEEEECTTTTCBCS--SCCCCGGGSCHHHHTTEEEEEE
T ss_pred cCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHc------CcEEEEeccchhcccC--CCCcCHHHcCCCCCCcEEEEec
Confidence 889999999999999998 4689999999999 9999999999875541 11111 111 12357888999
Q ss_pred CCcCCC-CCcCeeEEEE
Q 018437 275 GHKYGL-VYAGVGWVVW 290 (356)
Q Consensus 275 ~hK~l~-~P~g~g~l~~ 290 (356)
+||+++ ..+.+|+++.
T Consensus 272 ~sK~~~~~G~riG~~~~ 288 (447)
T 3b46_A 272 AGKSFAATGWRIGWVLS 288 (447)
T ss_dssp HHHHTTCTTSCCEEEEC
T ss_pred CchhcCCcchhhEEEEe
Confidence 999875 3455999987
No 65
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.87 E-value=4.7e-21 Score=185.29 Aligned_cols=201 Identities=13% Similarity=0.080 Sum_probs=157.4
Q ss_pred ChHHHHHHHHHHhcc---cCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCC-CeEEeCChhHHHHHHHHHHHHHHHH
Q 018437 68 MEPECDKLVMASINK---NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTA-VGVGTVGSSEAIMLAGLAFKRKWQQ 143 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~---~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~-~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (356)
+++.+.+++.+.++. ....|....+..++++++.+++.+.+|.+.+. . .+++|+||++|+..++.++..+
T Consensus 51 ~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~---~~~v~~~~g~~~a~~~~~~~~~~~--- 124 (429)
T 1yiz_A 51 APKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINP---MTEVLVTVGAYEALYATIQGHVDE--- 124 (429)
T ss_dssp CCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCT---TTSEEEESHHHHHHHHHHHHHCCT---
T ss_pred CCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCC---cCCEEEecChHHHHHHHHHHhcCC---
Confidence 457888888887764 22334444567889999999999988965321 3 5899999999999999887432
Q ss_pred HHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCC---------ccccCHHHHHHHHhhCceEEEEecCCCc
Q 018437 144 KRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG---------YYVMNPVKAVELVDENTICVAAILGSTL 214 (356)
Q Consensus 144 ~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~---------~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (356)
+++|+++.++|..+...++..|++++.+|++.+ ++.+|+++|++++++++++|++++++||
T Consensus 125 ----------gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~np 194 (429)
T 1yiz_A 125 ----------GDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNP 194 (429)
T ss_dssp ----------TCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEESSCTT
T ss_pred ----------CCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEECCCCCC
Confidence 478999999999999999999999999999764 4789999999999888999999999999
Q ss_pred ccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcc-ccc-CCCceEEEEcCCcCCCCCcC--eeE
Q 018437 215 TGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFR-LPLVKSINVSGHKYGLVYAG--VGW 287 (356)
Q Consensus 215 tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~-~~~~Ds~~~~~hK~l~~P~g--~g~ 287 (356)
||.+.+ +++|.++|+++ |+++|+|++|+++...- .+...+ .+. ..+.|.+..++||+++ +.| +|+
T Consensus 195 tG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~s~sK~~~-~~G~r~G~ 266 (429)
T 1yiz_A 195 LGKVMDRAELEVVANLCKKW------NVLCVSDEVYEHMVFEP-FEHIRICTLPGMWERTITIGSAGKTFS-LTGWKIGW 266 (429)
T ss_dssp TCCCCCHHHHHHHHHHHHHH------TCEEEEECTTTTCBCTT-SCCCCGGGSTTTGGGEEEEEEHHHHHT-CGGGCCEE
T ss_pred CCccCCHHHHHHHHHHHHHc------CcEEEEeccccccccCC-CCCcChhhccCCcCceEEEecchhccC-CCCcceEE
Confidence 999974 89999999999 99999999998754310 011111 121 2467899999999874 445 899
Q ss_pred EEEeC
Q 018437 288 VVWRT 292 (356)
Q Consensus 288 l~~~~ 292 (356)
++.++
T Consensus 267 ~~~~~ 271 (429)
T 1yiz_A 267 AYGPE 271 (429)
T ss_dssp EESCH
T ss_pred EEeCH
Confidence 98753
No 66
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.86 E-value=9.5e-21 Score=182.34 Aligned_cols=256 Identities=12% Similarity=0.047 Sum_probs=176.5
Q ss_pred CChHHHHHHHHHHhccc-CCCcccCcchHHHHHHHHHHHHHH------hCCCCCCCCCCCeEEeCChhHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHL------FNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l------~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~ 139 (356)
++++.+.+++.+.+... ...|....+..++++++.+++.+. .|++.+ ...+++|+||++++..++.++.+
T Consensus 50 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~---~~~v~~~~g~~~al~~~~~~l~~ 126 (416)
T 1bw0_A 50 LTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIV---KDNVVLCSGGSHGILMAITAICD 126 (416)
T ss_dssp CCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCC---GGGEEEESHHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCC---cceEEEeCChHHHHHHHHHHhCC
Confidence 45678888888777543 223444456778888877777742 233221 13589999999999999988743
Q ss_pred HHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCC-ccccCHHHHHHHHhhCceEEEEecCCCccccc
Q 018437 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDENTICVAAILGSTLTGEF 218 (356)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~ 218 (356)
+ +++|+++.++|.++...++..|++++.+|++++ ++.+|+++|++++++++++|++++|+||||.+
T Consensus 127 ~-------------gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~ 193 (416)
T 1bw0_A 127 A-------------GDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSN 193 (416)
T ss_dssp T-------------TCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCC
T ss_pred C-------------CCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhccCCeEEEEeCCCCCCCcc
Confidence 2 578999999999999999999999999998653 37899999999998888999999999999999
Q ss_pred CC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCC----Cccccc---CCCceEEEEcCCcCCCCC-cCeeE
Q 018437 219 ED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD----LEWDFR---LPLVKSINVSGHKYGLVY-AGVGW 287 (356)
Q Consensus 219 ~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~----~~~~~~---~~~~Ds~~~~~hK~l~~P-~g~g~ 287 (356)
.| +++|.++|+++ ++++|+|++|+.+... .. ....+. ....+.+..+++|+++.| ..+|+
T Consensus 194 ~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~---g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~ 264 (416)
T 1bw0_A 194 FSRKHVEDIVRLAEEL------RLPLFSDEIYAGMVFK---GKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGW 264 (416)
T ss_dssp CCHHHHHHHHHHHHHH------TCCEEEECTTTTCBCC---SSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEE
T ss_pred cCHHHHHHHHHHHHHc------CCEEEEEccccccccC---CCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEE
Confidence 88 99999999999 9999999999875431 11 111121 112245566899996544 46899
Q ss_pred EEEeCC-CCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 288 VVWRTK-DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 288 l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
++.+++ +.. +.+......... ..++.+....+++..+|+....+++++..++..+++++|
T Consensus 265 ~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 325 (416)
T 1bw0_A 265 LLYVDPHGNG-PSFLEGLKRVGM------LVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYL 325 (416)
T ss_dssp EEEECTTCSC-HHHHHHHHHHHH------HHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHH
T ss_pred EEeeCchhhH-HHHHHHHHHHhc------cccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 998764 333 221100000000 012333444555556666556777777777766665554
No 67
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.86 E-value=2.2e-20 Score=178.29 Aligned_cols=210 Identities=12% Similarity=0.062 Sum_probs=160.4
Q ss_pred CCcccccccCCC-ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHH
Q 018437 56 PRLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (356)
Q Consensus 56 ~~~~l~~~~~~~-~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (356)
..++|..+.+.. +++.+.+++.+.+......|....+..++++++.+++.+.+|++.+. ..+++|+||++++.+++
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~---~~i~~t~g~~~al~~~~ 108 (385)
T 1b5p_A 32 DLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTP---EETIVTVGGSQALFNLF 108 (385)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCG---GGEEEESHHHHHHHHHH
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCh---HHEEEcCChHHHHHHHH
Confidence 334555555543 34678888877765433344444567899999999999888875421 35899999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEEecCCC
Q 018437 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGST 213 (356)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (356)
.++.++ +++|+++.++|..+...++..|++++.+|+++ +++.+|+++|++++++++++|++++|+|
T Consensus 109 ~~l~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~N 175 (385)
T 1b5p_A 109 QAILDP-------------GDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNN 175 (385)
T ss_dssp HHHCCT-------------TCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTTEEEEEEESSCT
T ss_pred HHhcCC-------------CCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCCCCEEEEEeCCCC
Confidence 887532 57899999999999999999999999999975 3478999999999988899999999999
Q ss_pred cccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-C-CCceEEEEcCCcCCCCC-cCeeE
Q 018437 214 LTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-L-PLVKSINVSGHKYGLVY-AGVGW 287 (356)
Q Consensus 214 ~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~-~~~Ds~~~~~hK~l~~P-~g~g~ 287 (356)
|||.+.+ +++|.++|+++ ++++++|++|+.+... + ....+. . +..+.+..+++|+++.| ..+|+
T Consensus 176 PtG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~---~-~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~ 245 (385)
T 1b5p_A 176 PTGAVYPKEVLEALARLAVEH------DFYLVSDEIYEHLLYE---G-EHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGY 245 (385)
T ss_dssp TTCCCCCHHHHHHHHHHHHHT------TCEEEEECTTTTCBSS---S-CCCCGGGTCTTTEEEEEESTTTTTCGGGCCEE
T ss_pred CCCCCcCHHHHHHHHHHHHHc------CCEEEEEccchhcccC---C-CCCCHHHcCCCCEEEEEechhhcCCcccceEE
Confidence 9999855 89999999999 9999999999875441 1 111111 1 14567777899987432 34899
Q ss_pred EEEe
Q 018437 288 VVWR 291 (356)
Q Consensus 288 l~~~ 291 (356)
++.+
T Consensus 246 ~~~~ 249 (385)
T 1b5p_A 246 ACGP 249 (385)
T ss_dssp EECC
T ss_pred EEeC
Confidence 9874
No 68
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.86 E-value=2.9e-21 Score=185.88 Aligned_cols=207 Identities=15% Similarity=0.042 Sum_probs=158.7
Q ss_pred ccccccCC-CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHH
Q 018437 59 NLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF 137 (356)
Q Consensus 59 ~l~~~~~~-~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~ 137 (356)
+|..+.+. ++++.+.+++ +.+......|....+..++++++.+++.+.+|.+.+. ..+++|+||++|+..++.++
T Consensus 47 ~l~~~~~~~~~~~~v~~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~---~~v~~~~g~t~a~~~~~~~~ 122 (409)
T 2gb3_A 47 HLNIGQPDLKTPEVFFERI-YENKPEVVYYSHSAGIWELREAFASYYKRRQRVDVKP---ENVLVTNGGSEAILFSFAVI 122 (409)
T ss_dssp ECSSCCCCSCCCTHHHHHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCG---GGEEEESHHHHHHHHHHHHH
T ss_pred eccCCCCCCCCCHHHHHHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCH---HHEEEeCCHHHHHHHHHHHh
Confidence 44444443 2346788888 8776544445455567899999999999888865422 35899999999999999887
Q ss_pred HHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEEecCCCccc
Q 018437 138 KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (356)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG 216 (356)
..+ +++|+++.++|.++...++..|++++.+|+++ +++.+ +++|++++++++++|++++++||||
T Consensus 123 ~~~-------------gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~~~~~~v~~~~p~nptG 188 (409)
T 2gb3_A 123 ANP-------------GDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFINERTKGIVLSNPCNPTG 188 (409)
T ss_dssp CCT-------------TCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTGGGGCCTTEEEEEEESSCTTTC
T ss_pred CCC-------------CCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHHHHhhCcCCeEEEECCCCCCCC
Confidence 432 57899999999999999999999999999975 33566 8999999988899999999999999
Q ss_pred ccC---CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCCCC-cCeeEEEEe
Q 018437 217 EFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVY-AGVGWVVWR 291 (356)
Q Consensus 217 ~~~---~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~P-~g~g~l~~~ 291 (356)
.+. ++++|.++|+++ |+++|+|++|+++... ...... +. ..+.|.+..++||+++.| ..+|+++.+
T Consensus 189 ~~~~~~~l~~i~~~~~~~------~~~li~Dea~~~~~~~--~~~~~~-~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~ 259 (409)
T 2gb3_A 189 VVYGKDEMRYLVEIAERH------GLFLIVDEVYSEIVFR--GEFASA-LSIESDKVVVIDSVSKKFSACGARVGCLITR 259 (409)
T ss_dssp CCCCHHHHHHHHHHHHHT------TCEEEEECTTTTCBCS--SCCCCG-GGSCCTTEEEEEESTTTTTCGGGCCEEEECS
T ss_pred CCcCHHHHHHHHHHHHHc------CCEEEEECcccccccC--CCCCCc-cccCCCCEEEEecchhccCCccceEEEEEEC
Confidence 984 589999999999 9999999999876541 111111 22 246799999999998422 348999876
Q ss_pred C
Q 018437 292 T 292 (356)
Q Consensus 292 ~ 292 (356)
+
T Consensus 260 ~ 260 (409)
T 2gb3_A 260 N 260 (409)
T ss_dssp C
T ss_pred c
Confidence 4
No 69
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.86 E-value=9.7e-21 Score=179.46 Aligned_cols=207 Identities=13% Similarity=0.100 Sum_probs=158.8
Q ss_pred CCCCcccccccCCC-ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHH
Q 018437 54 GNPRLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (356)
Q Consensus 54 ~~~~~~l~~~~~~~-~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~ 132 (356)
++..++|..+.++. +++.+.+++.+.+......|....+..++++++.+++.+.+|++.+. ..+++|+||++++..
T Consensus 28 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~---~~v~~~~g~~~a~~~ 104 (370)
T 2z61_A 28 GKKVIHLEIGEPDFNTPKPIVDEGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADIIP---DNIIITGGSSLGLFF 104 (370)
T ss_dssp TCCCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCCG---GGEEEESSHHHHHHH
T ss_pred CCCEEEccCCCCCCCCCHHHHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCh---hhEEECCChHHHHHH
Confidence 33444455554443 35788888887776433344445567889999999999888865422 458999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCC
Q 018437 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGS 212 (356)
Q Consensus 133 al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~ 212 (356)
++.++.++ +++|+++.++|.++...++..|++++.+| +|+++|++++++++++|++++|+
T Consensus 105 ~~~~~~~~-------------gd~vl~~~p~~~~~~~~~~~~g~~~~~v~-------~d~~~l~~~l~~~~~~v~~~~p~ 164 (370)
T 2z61_A 105 ALSSIIDD-------------GDEVLIQNPCYPCYKNFIRFLGAKPVFCD-------FTVESLEEALSDKTKAIIINSPS 164 (370)
T ss_dssp HHHHHCCT-------------TCEEEEESSCCTHHHHHHHHTTCEEEEEC-------SSHHHHHHHCCSSEEEEEEESSC
T ss_pred HHHHhcCC-------------CCEEEEeCCCchhHHHHHHHcCCEEEEeC-------CCHHHHHHhcccCceEEEEcCCC
Confidence 99887432 47899999999999999999999988887 68999999998888999999999
Q ss_pred CcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCCCCcC--eeEEE
Q 018437 213 TLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAG--VGWVV 289 (356)
Q Consensus 213 ~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~P~g--~g~l~ 289 (356)
||||.+.|++ |.++|+++ ++++++|++|+.+...- .+.....+. ..+.|.+..++||+++ +.| +|+++
T Consensus 165 nptG~~~~~~-l~~~~~~~------~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~ 235 (370)
T 2z61_A 165 NPLGEVIDRE-IYEFAYEN------IPYIISDEIYNGLVYEG-KCYSAIEFDENLEKTILINGFSKLYA-MTGWRIGYVI 235 (370)
T ss_dssp TTTCCCCCHH-HHHHHHHH------CSEEEEECTTTTCBSSS-CCCCGGGTCTTCSSEEEEEESTTTTT-CGGGCCEEEE
T ss_pred CCcCcccCHH-HHHHHHHc------CCEEEEEcchhhcccCC-CCcCHHHccCCCCcEEEEecChhccC-CccceEEEEE
Confidence 9999999999 99999999 99999999998765410 000011221 2467899999999984 444 89988
Q ss_pred EeC
Q 018437 290 WRT 292 (356)
Q Consensus 290 ~~~ 292 (356)
.++
T Consensus 236 ~~~ 238 (370)
T 2z61_A 236 SND 238 (370)
T ss_dssp CCH
T ss_pred ECH
Confidence 754
No 70
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.86 E-value=8.4e-21 Score=178.57 Aligned_cols=200 Identities=17% Similarity=0.083 Sum_probs=153.9
Q ss_pred cccccccCC-CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 58 LNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 58 ~~l~~~~~~-~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
++|....+. ++++.+.+++.+.+... ..| ..+ ...++++++++++|+++ ..+++|+||++++..++.+
T Consensus 19 i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~y-~~~----~~~~l~~~la~~~~~~~-----~~i~~~~g~~~a~~~~~~~ 87 (354)
T 3ly1_A 19 IRINFNENPLGMSPKAQAAARDAVVKA-NRY-AKN----EILMLGNKLAAHHQVEA-----PSILLTAGSSEGIRAAIEA 87 (354)
T ss_dssp EECSSCCCSSCCCHHHHHHHHHTGGGT-TSC-CHH----HHHHHHHHHHHHTTSCG-----GGEEEESHHHHHHHHHHHH
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHhhC-cCC-CCC----chHHHHHHHHHHhCCCh-----HHEEEeCChHHHHHHHHHH
Confidence 344444333 35678999998877642 222 112 23467778999999875 3489999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHh--hCceEEEEecCCCc
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD--ENTICVAAILGSTL 214 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~--~~~~~v~~~~~~~~ 214 (356)
+.++ +++|+++.++|.++...++..|++++.+|.+++ +.+|+++|+++++ +++++|++++++||
T Consensus 88 l~~~-------------gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~~v~l~~p~np 153 (354)
T 3ly1_A 88 YASL-------------EAQLVIPELTYGDGEHFAKIAGMKVTKVKMLDN-WAFDIEGLKAAVAAYSGPSIVYLVNPNNP 153 (354)
T ss_dssp HCCT-------------TCEEEEESSSCTHHHHHHHHTTCEEEEECCCTT-SCCCHHHHHHHHHTCSSCEEEEEESSCTT
T ss_pred HhCC-------------CCeEEECCCCchHHHHHHHHcCCEEEEecCCCC-CCCCHHHHHHHhccCCCCCEEEEeCCCCC
Confidence 7432 578999999999999999999999999999864 8999999999998 78999999999999
Q ss_pred ccccCCHHHHHHHHHH--hhhccCCCCcEEEecccccccccccCCC--Ccccc-cCC-CceEEEEcCCcCCC-CCcCeeE
Q 018437 215 TGEFEDVKLLHDLLTK--KNEETGWDTPIHVDAASGGFIAPFLYPD--LEWDF-RLP-LVKSINVSGHKYGL-VYAGVGW 287 (356)
Q Consensus 215 tG~~~~i~~I~~i~~~--~~~~~~~~~~l~vD~a~~~~~~~~~~~~--~~~~~-~~~-~~Ds~~~~~hK~l~-~P~g~g~ 287 (356)
||.+.|++++.++++. + ++++|+|++|+.+... .. ..... ... ..+.+..++||+++ .+.++|+
T Consensus 154 tG~~~~~~~l~~l~~~~~~------~~~li~De~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~ 224 (354)
T 3ly1_A 154 TGTITPADVIEPWIASKPA------NTMFIVDEAYAEFVND---PRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGY 224 (354)
T ss_dssp TCCCCCHHHHHHHHHTCCT------TEEEEEECTTGGGCCC---TTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEE
T ss_pred cCCCcCHHHHHHHHHhCCC------CeEEEEeccHHHhccc---cccCCHHHHhhhcCCCEEEEeeChhhccChhhhhee
Confidence 9999999999998888 7 9999999999875441 11 11111 122 45677889999985 5567898
Q ss_pred EEEe
Q 018437 288 VVWR 291 (356)
Q Consensus 288 l~~~ 291 (356)
++..
T Consensus 225 ~~~~ 228 (354)
T 3ly1_A 225 AVAH 228 (354)
T ss_dssp EECC
T ss_pred eecC
Confidence 8863
No 71
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.86 E-value=3.4e-21 Score=182.97 Aligned_cols=209 Identities=10% Similarity=0.028 Sum_probs=157.4
Q ss_pred cccccccCCC-ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 58 LNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 58 ~~l~~~~~~~-~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
++|..+.+.. +++.+.+++.+.+......|... ..++++++++++++.+|.+.+ ...+++|+||++++..++.+
T Consensus 27 i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~~~~~l~~~l~~~~g~~~~---~~~v~~~~g~~~a~~~~~~~ 101 (383)
T 3kax_A 27 IHAWIADMDFEVPQPIQTALKKRIEHPIFGYTLP--PENIGDIICNWTKKQYNWDIQ---KEWIVFSAGIVPALSTSIQA 101 (383)
T ss_dssp EECCCSSCSSCCCHHHHHHHHHHHHSCCCCCCCC--CTTHHHHHHHHHHHHHCCCCC---GGGEEEESCHHHHHHHHHHH
T ss_pred eecccccCCCCCCHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHHHHHHhCCCCC---hhhEEEcCCHHHHHHHHHHH
Confidence 3454444433 46789999988876543333332 467888999999999995431 13589999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC--CccccCHHHHHHHHhhCceEEEEecCCCc
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE--GYYVMNPVKAVELVDENTICVAAILGSTL 214 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~--~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (356)
+.++ +++|+++.++|.++...++..|++++.+|++. .++.+|+++|++++++++++|++++++||
T Consensus 102 l~~~-------------gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~np 168 (383)
T 3kax_A 102 FTKE-------------NESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNP 168 (383)
T ss_dssp HCCT-------------TCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSBTT
T ss_pred hCCC-------------CCEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCC
Confidence 7432 57999999999999999999999999999863 23679999999999888999999999999
Q ss_pred ccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-C----CCceEEEEcCCcCCC-CCcCe
Q 018437 215 TGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-L----PLVKSINVSGHKYGL-VYAGV 285 (356)
Q Consensus 215 tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~----~~~Ds~~~~~hK~l~-~P~g~ 285 (356)
||.+.| +++|.++|+++ ++++|+|++|+.+... ......+. . ...+.+..++||+++ .+.++
T Consensus 169 tG~~~~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~---g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 239 (383)
T 3kax_A 169 IGRVWKKEELTKLGSLCTKY------NVIVVADEIHSDIIYA---DHTHTPFASLSEELAARTITCMAPSKTFNIAGLQA 239 (383)
T ss_dssp TTBCCCHHHHHHHHHHHHHH------TCEEEEECTTTTCBCT---TCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCC
T ss_pred CCcCcCHHHHHHHHHHHHHC------CCEEEEEccccccccC---CCCceeHhhcCccccCcEEEEEEChhhccCcchhh
Confidence 999966 56667779999 9999999999875541 11111111 1 144577888999875 45678
Q ss_pred eEEEEeCC
Q 018437 286 GWVVWRTK 293 (356)
Q Consensus 286 g~l~~~~~ 293 (356)
|+++..++
T Consensus 240 G~~~~~~~ 247 (383)
T 3kax_A 240 SIIIIPNE 247 (383)
T ss_dssp EEEECCCH
T ss_pred eEEEeCCH
Confidence 88877443
No 72
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.86 E-value=8.9e-21 Score=183.67 Aligned_cols=261 Identities=15% Similarity=0.062 Sum_probs=179.0
Q ss_pred CcccccccCC-----CChHHHHHHHHHHhcccC-CCcccCcchHHHHHHHHHHHHHHhC-----CCCCCCCCCCeEEeCC
Q 018437 57 RLNLASFVTT-----WMEPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFN-----TPVADDKTAVGVGTVG 125 (356)
Q Consensus 57 ~~~l~~~~~~-----~~~~~v~~~i~~~~~~~~-~~~~~~~~~~~le~~~~~~la~l~g-----~~~~~~~~~~~~~t~G 125 (356)
.++|+.+.+. ++++.+.+++.+.+.... ..|....+..++++. ++++++ ++. ..+++|+|
T Consensus 56 ~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~----la~~~~~~~~~~~~-----~~v~~t~g 126 (427)
T 3dyd_A 56 MISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREE----IASYYHCPEAPLEA-----KDVILTSG 126 (427)
T ss_dssp CEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHH----HHHHHCBTTBCCCG-----GGEEEESS
T ss_pred EEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHH----HHHHHhhcCCCCCh-----HHEEEecC
Confidence 3567766654 456788999888776532 234444566666666 555555 333 35899999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCce
Q 018437 126 SSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTI 204 (356)
Q Consensus 126 gt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~ 204 (356)
|++|+..++.++.++ +++|+++.++|..+...++..|++++.+|+++ +++.+|+++|+++++++++
T Consensus 127 ~t~al~~~~~~l~~~-------------gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 193 (427)
T 3dyd_A 127 CSQAIDLCLAVLANP-------------GQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTA 193 (427)
T ss_dssp HHHHHHHHHHHHCCT-------------TCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCTTEE
T ss_pred cHHHHHHHHHHhcCC-------------CCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCC
Confidence 999999999887542 57899999999999999999999999999864 3478999999999998899
Q ss_pred EEEEecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc--CCCce-EEEEcCCcC
Q 018437 205 CVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPLVK-SINVSGHKY 278 (356)
Q Consensus 205 ~v~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~D-s~~~~~hK~ 278 (356)
+|++++|+||||.+.| +++|.++|+++ ++++++|++|+++... ......+. ....+ .+..+++|.
T Consensus 194 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~------~~~~i~Deay~~~~~~---g~~~~~~~~~~~~~~vi~~~S~sK~ 264 (427)
T 3dyd_A 194 CLIVNNPSNPCGSVFSKRHLQKILAVAARQ------CVPILADEIYGDMVFS---DCKYEPLATLSTDVPILSCGGLAKR 264 (427)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHT------TCCEEEECTTTTCBCS---SCCCCCGGGGCSSCCEEEEEESTTT
T ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHHHHC------CCEEEEEcCchhhccC---CCcCccHHHhCCCCcEEEEeecccc
Confidence 9999999999999988 99999999999 9999999999876541 11111221 11223 344589997
Q ss_pred -CCCCcCeeEEEEeCCCCC-ccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 279 -GLVYAGVGWVVWRTKDDL-PDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 279 -l~~P~g~g~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
+.....+|+++++++... ...+......... ...+.+.....++..+|+....+.++++.++..+++++|
T Consensus 265 ~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~------~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l 336 (427)
T 3dyd_A 265 WLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQ------RILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLC 336 (427)
T ss_dssp SSCGGGCCEEEEEECSTTSSHHHHHHHHHHHHH------HHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCcceEEEEecCcchhhHHHHHHHHHHHHh------ccCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 444456899998764211 0111000000000 012333444556666676666677777777666665554
No 73
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.86 E-value=1.7e-20 Score=180.51 Aligned_cols=218 Identities=11% Similarity=0.002 Sum_probs=158.8
Q ss_pred cCCCCcccccccCCC-ChHHHHHHHHHHhccc-CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHH
Q 018437 53 DGNPRLNLASFVTTW-MEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAI 130 (356)
Q Consensus 53 ~~~~~~~l~~~~~~~-~~~~v~~~i~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~ 130 (356)
+++..++|..+.+.. +++.+.+++.+.+... ...|....+..++++++.+++.+.+|.+.+. ...+++|+||++|+
T Consensus 35 ~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~--~~~v~~t~g~~~a~ 112 (412)
T 2x5d_A 35 RGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDP--ESEAIVTIGSKEGL 112 (412)
T ss_dssp TTCCCEECSSCCCCSCCCHHHHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCCT--TTSEEEESCHHHHH
T ss_pred cCCCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC--CcCEEEcCChHHHH
Confidence 444444555555443 4578888888777543 2234445567889999888888888975310 02489999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCC-ccccCHHHHHHHHhhCceEEEEe
Q 018437 131 MLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDENTICVAAI 209 (356)
Q Consensus 131 ~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~~~~~v~~~ 209 (356)
..++.++..+ +++|+++.++|..+...++..|++++.+|++++ ++.+|+++|++++++++++|+++
T Consensus 113 ~~~~~~~~~~-------------gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~ 179 (412)
T 2x5d_A 113 AHLMLATLDH-------------GDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILG 179 (412)
T ss_dssp HHHHHHHCCT-------------TCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEE
T ss_pred HHHHHHhCCC-------------CCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcccCceEEEEC
Confidence 9999887432 478999999999999999999999999999764 46789999999998889999999
Q ss_pred cCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCC-CCcC
Q 018437 210 LGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGL-VYAG 284 (356)
Q Consensus 210 ~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~-~P~g 284 (356)
+|+||||.+.+ +++|.++|+++ ++++|+|++|+.+...--.......+. ..+.|.+..++||+++ ....
T Consensus 180 ~p~nptG~~~~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 253 (412)
T 2x5d_A 180 FPSNPTAQCVELDFFERVVALAKQY------DVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWR 253 (412)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSC
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHc------CCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccc
Confidence 99999999865 68899999999 999999999987653100000011111 1357888999999985 3346
Q ss_pred eeEEEEe
Q 018437 285 VGWVVWR 291 (356)
Q Consensus 285 ~g~l~~~ 291 (356)
+|+++.+
T Consensus 254 ~G~~~~~ 260 (412)
T 2x5d_A 254 IGFMVGN 260 (412)
T ss_dssp CEEEEEC
T ss_pred eEEEEcC
Confidence 8999874
No 74
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.86 E-value=2.6e-21 Score=185.22 Aligned_cols=190 Identities=10% Similarity=-0.044 Sum_probs=148.3
Q ss_pred ChHHHHHHHHHHhcccCCC---cccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q 018437 68 MEPECDKLVMASINKNYVD---MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~---~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (356)
+++.+.+++.+.+...... +....+...+.+++++++++++|.+. +++|+||++|+..++.++.++
T Consensus 58 ~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~-------v~~~~ggt~a~~~~~~~~~~~---- 126 (398)
T 3a2b_A 58 TDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGKEA-------AILFSTGFQSNLGPLSCLMGR---- 126 (398)
T ss_dssp GCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCSE-------EEEESSHHHHHHHHHHHSSCT----
T ss_pred CCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC----
Confidence 4577888887776542222 22223556788899999999999753 899999999999999887432
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh----CceEEEEecCCCcccccCC
Q 018437 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NTICVAAILGSTLTGEFED 220 (356)
Q Consensus 145 ~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~----~~~~v~~~~~~~~tG~~~~ 220 (356)
+++|+++.++|.++..+++..|++++.+|. +|+++|++++++ ++++|++++++||||.+.|
T Consensus 127 ---------gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~------~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~ 191 (398)
T 3a2b_A 127 ---------NDYILLDERDHASIIDGSRLSFSKVIKYGH------NNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVN 191 (398)
T ss_dssp ---------TCEEEEETTCCHHHHHHHHHSSSEEEEECT------TCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCC
T ss_pred ---------CCEEEECCccCHHHHHHHHHcCCceEEeCC------CCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccC
Confidence 578999999999999999999999988875 588999999987 7899999999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccc-cC-CCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RL-PLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 221 i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~-~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
+++|.++|+++ ++++|+|++|+.+..... ....... .. +++|.++.++||+++ |.| |+++.++
T Consensus 192 ~~~l~~~~~~~------~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~di~~~s~sK~~~-~~G-G~~~~~~ 256 (398)
T 3a2b_A 192 LPELTSIANEF------DAAVMVDDAHSLGVIGHK-GAGTASHFGLNDDVDLIMGTFSKSLA-SLG-GFVAGDA 256 (398)
T ss_dssp HHHHHHHHHHH------TCEEEEECTTTTTTSSGG-GCCHHHHHTCGGGCSEEEEESSSTTC-SSC-EEEEECH
T ss_pred HHHHHHHHHHc------CcEEEEECCCcccccCCC-CCchHhhcCCCcCCeEEEeccccccc-CCC-cEEEeCH
Confidence 99999999999 999999999986543110 0001111 11 247999999999985 777 9988753
No 75
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.86 E-value=1.7e-21 Score=185.06 Aligned_cols=184 Identities=16% Similarity=0.054 Sum_probs=139.7
Q ss_pred hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHH-HHHHHHHHHh
Q 018437 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF-KRKWQQKRKE 147 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~-~~~~~~~~~~ 147 (356)
.+.+.+++.+.+..+. +...+... ++++.+++++|.+. +++|+|||+|+..++.++ ..
T Consensus 16 ~~~~~~a~~~~~~~~~--~~~~~~~~----~l~~~la~~~~~~~-------~i~~~sgt~al~~~l~~l~~~-------- 74 (373)
T 3frk_A 16 EYEIKFKFEEIYKRNW--FILGDEDK----KFEQEFADYCNVNY-------CIGCGNGLDALHLILKGYDIG-------- 74 (373)
T ss_dssp HHHHHHHHHHHHHHTC--CSSSHHHH----HHHHHHHHHHTSSE-------EEEESCHHHHHHHHHHHTTCC--------
T ss_pred CHHHHHHHHHHHHCCC--ccCCchHH----HHHHHHHHHhCCCe-------EEEeCCHHHHHHHHHHHcCCC--------
Confidence 3567777777665443 23334444 45555888888863 799999999999998876 22
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHH
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDL 227 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i 227 (356)
.+++|+++.++|.++...++..|++++.++++++++.+|+++|++++++++++|+ ++|++|.+.|+++|.++
T Consensus 75 -----~gd~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~l~~i~~l 146 (373)
T 3frk_A 75 -----FGDEVIVPSNTFIATALAVSYTGAKPIFVEPDIRTYNIDPSLIESAITEKTKAII---AVHLYGQPADMDEIKRI 146 (373)
T ss_dssp -----TTCEEEEETTSCTHHHHHHHHHSCEEEEECEETTTTEECGGGTGGGCCTTEEEEE---EECCTTCCCCHHHHHHH
T ss_pred -----CcCEEEECCCCcHHHHHHHHHcCCEEEEEeccccccCcCHHHHHHhcCCCCeEEE---EECCCcCcccHHHHHHH
Confidence 1579999999999999999999999999999865699999999999998888877 67899999999999999
Q ss_pred HHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEc--CCcCCCCCcCeeEEEEeCC
Q 018437 228 LTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVS--GHKYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 228 ~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~--~hK~l~~P~g~g~l~~~~~ 293 (356)
|+++ |+++|+|++|+.+.. .... . . -...|.+++| +||+++++...|+++.+++
T Consensus 147 ~~~~------~~~li~D~a~~~g~~--~~~~-~--~-~~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~ 202 (373)
T 3frk_A 147 AKKY------NLKLIEDAAQAHGSL--YKGM-K--V-GSLGDAAGFSFYPAKNLGSLGDGGAVVTNDK 202 (373)
T ss_dssp HHHH------TCEEEEECTTCTTCE--ETTE-E--T-TSSSSEEEEECCTTSSSCCSSSCEEEEESCH
T ss_pred HHHc------CCEEEEECCcccCCE--ECCE-e--c-cccccEEEEeCcCCCccCccceeEEEEeCCH
Confidence 9999 999999999986443 1111 1 1 1124676666 7799865344566666543
No 76
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.86 E-value=3.2e-21 Score=182.61 Aligned_cols=188 Identities=12% Similarity=0.042 Sum_probs=146.2
Q ss_pred CCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (356)
.+++++.+.+++.+.+......+ .+ ...++++.+++++|.+. +++|+||++|+..++.+++..
T Consensus 8 ~~~~~~~v~~a~~~~~~~~~~~~--~~----~~~~l~~~la~~~~~~~-------v~~~~ggt~al~~~~~~~~~~---- 70 (375)
T 2fnu_A 8 EPCLDKEDKKAVLEVLNSKQLTQ--GK----RSLLFEEALCEFLGVKH-------ALVFNSATSALLTLYRNFSEF---- 70 (375)
T ss_dssp CCCCCHHHHHHHHHHHTSSCCSS--SH----HHHHHHHHHHHHHTCSE-------EEEESCHHHHHHHHHHHSSCC----
T ss_pred CCCCCHHHHHHHHHHHHcCcccC--Ch----HHHHHHHHHHHHhCCCe-------EEEeCCHHHHHHHHHHHhccc----
Confidence 34566788999988876433222 22 23466677899998863 899999999999999887210
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHH
Q 018437 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLL 224 (356)
Q Consensus 145 ~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I 224 (356)
-..+++|+++.++|+++...+...|++++.++++++ +.+|+++|++++++++++|+++++ +|.+.|+++|
T Consensus 71 ------~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~l~~i 140 (375)
T 2fnu_A 71 ------SADRNEIITTPISFVATANMLLESGYTPVFAGIKND-GNIDELALEKLINERTKAIVSVDY---AGKSVEVESV 140 (375)
T ss_dssp ------CTTSCEEEECSSSCTHHHHHHHHTTCEEEECCBCTT-SSBCGGGSGGGCCTTEEEEEEECG---GGCCCCHHHH
T ss_pred ------CCCCCEEEECCCccHhHHHHHHHCCCEEEEeccCCC-CCCCHHHHHhhcCcCceEEEEeCC---cCCccCHHHH
Confidence 001469999999999999999999999999999875 689999999999888888887766 8999999999
Q ss_pred HHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 225 HDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 225 ~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
.++|+++ |+++|+|++|+.+..+ .. ..+. ...++.+++++||++ +| |+|.+++++
T Consensus 141 ~~l~~~~------~~~li~D~a~~~~~~~--~~---~~~~~~~~i~~~s~s~~K~~-~~-g~g~~~~~~ 196 (375)
T 2fnu_A 141 QKLCKKH------SLSFLSDSSHALGSEY--QN---KKVGGFALASVFSFHAIKPI-TT-AEGGAVVTN 196 (375)
T ss_dssp HHHHHHH------TCEEEEECTTCTTCEE--TT---EETTSSSSEEEEECCTTSSS-CC-SSCEEEEES
T ss_pred HHHHHHc------CCEEEEECccccCCeE--CC---eeccccCCeEEEeCCCCCCc-cc-cCceEEEeC
Confidence 9999999 9999999999865542 11 0111 224778888899998 66 889988854
No 77
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.86 E-value=6.7e-21 Score=182.27 Aligned_cols=200 Identities=14% Similarity=0.091 Sum_probs=153.4
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
++++.+.+++.+.+......|... ..++++++.+++++.+|++.+. ..+++|+||++|+..++.++..+
T Consensus 44 ~~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~---~~v~~t~g~~~a~~~~~~~l~~~------ 112 (399)
T 1c7n_A 44 KNPPELIEGLKKYLDETVLGYTGP--TEEYKKTVKKWMKDRHQWDIQT---DWIINTAGVVPAVFNAVREFTKP------ 112 (399)
T ss_dssp CCCHHHHHHHHHHHHHCCCSSBCC--CHHHHHHHHHHHHHHHCCCCCG---GGEEEESSHHHHHHHHHHHHCCT------
T ss_pred CCCHHHHHHHHHHHhcCCCCCCCC--cHHHHHHHHHHHHHHhCCCCCh---hhEEEcCCHHHHHHHHHHHhcCC------
Confidence 345788888887775433333332 6788889989998888854321 35899999999999999877432
Q ss_pred hcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec-CC-ccccCHHHHHHHHh-hCceEEEEecCCCcccccCC---
Q 018437 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EG-YYVMNPVKAVELVD-ENTICVAAILGSTLTGEFED--- 220 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~-~~-~~~~d~~~L~~~i~-~~~~~v~~~~~~~~tG~~~~--- 220 (356)
+++|+++.++|.++...++..|++++.+|++ ++ ++.+|+++|+++++ +++++|++++++||||.+.|
T Consensus 113 -------gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~ 185 (399)
T 1c7n_A 113 -------GDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDE 185 (399)
T ss_dssp -------TCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCHHH
T ss_pred -------CCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCHHH
Confidence 4789999999999999999999999999985 32 36799999999998 67899999999999999988
Q ss_pred HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-C----CCceEEEEcCCcCCC-CCcCeeEEEEeCC
Q 018437 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-L----PLVKSINVSGHKYGL-VYAGVGWVVWRTK 293 (356)
Q Consensus 221 i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~----~~~Ds~~~~~hK~l~-~P~g~g~l~~~~~ 293 (356)
+++|.++|+++ ++++|+|++|+++... ......+. . ...+.+..+.+|+++ ....+|+++++++
T Consensus 186 l~~i~~~~~~~------~~~li~De~~~~~~~~---g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 255 (399)
T 1c7n_A 186 LQKIKDIVLKS------DLMLWSDEIHFDLIMP---GYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNP 255 (399)
T ss_dssp HHHHHHHHHHS------SCEEEEECTTTTCBCT---TCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCH
T ss_pred HHHHHHHHHHc------CCEEEEEccccccccC---CCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCH
Confidence 99999999999 9999999999875431 11111221 1 134567788999875 3345799987643
No 78
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.86 E-value=5.4e-21 Score=187.83 Aligned_cols=276 Identities=12% Similarity=0.027 Sum_probs=165.0
Q ss_pred HHHHHHHHHhhhcCCCCcccccccCCCChHHHHHHHHHHhcccC--CCcc-----cCcchHHHHHHHHHHHHHHhCCCCC
Q 018437 41 AAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNY--VDMD-----EYPVTTELQNRCVNMIAHLFNTPVA 113 (356)
Q Consensus 41 ~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~i~~~~~~~~--~~~~-----~~~~~~~le~~~~~~la~l~g~~~~ 113 (356)
++.+.+.+...+..+ .+.|.. .++++++.|.+++.+.+.+.. +++. ..+...++|+.+++++++++|++.+
T Consensus 41 ~~~~~~~~e~~rq~~-~i~lia-s~n~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~ 118 (490)
T 2a7v_A 41 EMWELLQREKDRQCR-GLELIA-SENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPA 118 (490)
T ss_dssp HHHHHHHHHHHHHHH-SEECCT-TCCCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHHHHHc-CceEEC-CCCCCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCCCcc
Confidence 366665554443221 122222 344567899999987765332 2221 1123458898999999999999862
Q ss_pred CCCCC-CeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH--------HHHhhCCeeE--EEE
Q 018437 114 DDKTA-VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK--------FARYFEVELK--EVK 182 (356)
Q Consensus 114 ~~~~~-~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~--------~~~~~G~~v~--~v~ 182 (356)
+ . ..+++++||+||+.++.++.++ +++|+++.+.|.++.. .+...|..++ .++
T Consensus 119 ~---~~~~v~~~sGt~An~~al~al~~p-------------GD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~ 182 (490)
T 2a7v_A 119 Q---WGVNVQPYSGSPANLAVYTALLQP-------------HDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYK 182 (490)
T ss_dssp T---EEEECCCSSHHHHHHHHHHHHCCS-------------CEECCC-------------------------------CC
T ss_pred c---CceEEeCCchHHHHHHHHHHHcCC-------------CCEecccCccccccccchhhhcchhHHHcCCeEEEEecc
Confidence 1 1 2356678999999999987543 5799999888754321 2345565444 444
Q ss_pred ecCCccccCHHHHHHHHhh-CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcc
Q 018437 183 LEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 261 (356)
Q Consensus 183 ~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~ 261 (356)
++++++.+|+++|++++.+ ++++|+++.++++ ...|+++|.++|+++ |+++|+|+|++.+... .+..+.
T Consensus 183 vd~~~~~iD~d~le~~l~~~~~klIi~~~s~~~--~~~dl~~i~~ia~~~------g~~livD~Ah~~glv~--~g~~~~ 252 (490)
T 2a7v_A 183 LNPKTGLIDYNQLALTARLFRPRLIIAGTSAYA--RLIDYARMREVCDEV------KAHLLADMAHISGLVA--AKVIPS 252 (490)
T ss_dssp BCTTTCSBCHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHT------TCEEEEECGGGHHHHH--TTSSCC
T ss_pred cccccCCcCHHHHHHHHhhcCCcEEEEcCCCCC--CcccHHHHHHHHHHc------CCEEEEcccccccccc--CCcCCC
Confidence 5654689999999999964 7888877666654 577999999999999 9999999998654331 111111
Q ss_pred cccCCCceEEEEcCCcCCCCCcCeeEEEEeCCC-------------CCccccccccCCCCCCCCCccccCCCChhHHHHH
Q 018437 262 DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD-------------DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQ 328 (356)
Q Consensus 262 ~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~ 328 (356)
.+ .++|.++.++||++.+|.| |+++.+++. .+.+.+ .. ... ..++|+++...++++
T Consensus 253 ~~--~~aDiv~~S~hK~l~Gp~G-G~i~~~~~~~~~~~~~~~~~~~~l~~~i--~~-~~~-----~g~qggp~~~~iaAl 321 (490)
T 2a7v_A 253 PF--KHADIVTTTTHKTLRGARS-GLIFYRKGVKAVDPKTGREIPYTFEDRI--NF-AVF-----PSLQGGPHNHAIAAV 321 (490)
T ss_dssp GG--GTCSEEEEESSGGGCSCSC-EEEEEECSEEEEETTTEEEEECCCHHHH--HH-HHT-----TTTCCSCCHHHHHHH
T ss_pred CC--CCCCEEEECCcccCccccc-hheeeccchhcccccccchhhHHHHHHH--HH-Hhc-----ccCCCCchHHHHHHH
Confidence 22 3789999999999988987 888887631 011110 00 000 112345556556666
Q ss_pred HHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 329 YYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 329 ~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
.+++...-.++++++.++..+++++|+
T Consensus 322 a~Al~~~~~~~~~~~~~~~~~na~~L~ 348 (490)
T 2a7v_A 322 AVALKQACTPMFREYSLQVLKNARAMA 348 (490)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 667766544555667777777666653
No 79
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.86 E-value=5.4e-22 Score=193.53 Aligned_cols=218 Identities=12% Similarity=0.007 Sum_probs=154.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhC
Q 018437 96 LQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFE 175 (356)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G 175 (356)
...++++++++ +|.+. ..++|+|+|+|+..++.++..+ +++|+++.++|.++..++...|
T Consensus 58 ~~~~~~~~la~-~g~~~------~v~~~~G~t~a~~~~~~a~~~~-------------gd~Vlv~~~~h~s~~~~~~~~G 117 (446)
T 2x3l_A 58 VILKSMKQVEK-HSDYD------GYFLVNGTTSGILSVIQSFSQK-------------KGDILMARNVHKSVLHALDISQ 117 (446)
T ss_dssp HHHHHHHHHCS-CTTEE------EEEESSHHHHHHHHHHHTTTTS-------------SSCEEECTTCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHh-cCCCc------eEEEeCCHHHHHHHHHHHhcCC-------------CCEEEEecCccHHHHHHHHHcC
Confidence 34577788999 99862 3689999999999999887432 5789999999999999999999
Q ss_pred CeeEEEEe--cCCc---cccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccc
Q 018437 176 VELKEVKL--EEGY---YVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGF 250 (356)
Q Consensus 176 ~~v~~v~~--~~~~---~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~ 250 (356)
++++.++. +++. +.+|+++| +.+++++|++++ .|++|.+.|+++|.++|+++ ++++|+|+||++
T Consensus 118 ~~~~~v~~~~~~~~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~------~~~livDea~~~- 186 (446)
T 2x3l_A 118 QEGHFIETHQSPLTNHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFNVEEVIKSLHQL------NIPVLIDEAHGA- 186 (446)
T ss_dssp CCEEECEEEECTTTSSEEEEEC----------CCEEEEES-SCTTSCCCCHHHHHHHHHHT------TCCEEEECTTCT-
T ss_pred CeEEEEeCeeccccCcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecCHHHHHHHHHhc------CCeEEEcchhhh-
Confidence 99999998 5421 67899888 566789999999 55599999999999999999 999999999987
Q ss_pred cccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCCCChhHHHHHHH
Q 018437 251 IAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYY 330 (356)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~ 330 (356)
...|. +. +.+....++|.++.|+||++++|.|+|+++++++......+....... ..+|.+....+++.+
T Consensus 187 ~~~f~-~~-~~~~~~~g~Di~~~S~~K~l~~~~g~g~l~~~~~~i~~~~~~~~~~~~--------~~~s~~~~~~aal~~ 256 (446)
T 2x3l_A 187 HFGLQ-GF-PDSTLNYQADYVVQSFHKTLPALTMGSVLYIHKNAPYRENIIEYLSYF--------QTSSPSYLIMASLES 256 (446)
T ss_dssp TTTST-TS-CCCGGGGTCSEEEECHHHHSSSCTTCEEEEEETTCTTHHHHHHHHHHH--------SCSSCCHHHHHHHHH
T ss_pred hhccC-CC-CCChHHcCCCEEEECCccccccccccEEEEEcCCcCCHHHHHHHHHHH--------cCCCchHHHHHHHHH
Confidence 33322 22 233322368999999999999999999999976522101111000000 124555655667777
Q ss_pred HHHHhCHHHHHHHHHHHHhccCcc
Q 018437 331 QFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 331 ~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
+++.+...|.+++.++..+++++|
T Consensus 257 a~~~l~~~g~~~~~~~~~~l~~~l 280 (446)
T 2x3l_A 257 AAQFYKTYDSTLFFAKRAQLIECL 280 (446)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHH
Confidence 777665555555666666666654
No 80
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.85 E-value=1.1e-20 Score=180.46 Aligned_cols=217 Identities=16% Similarity=0.018 Sum_probs=162.0
Q ss_pred CCCCcccccccCCC-ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCC-CCCCCCC-CeEEeCChhHHH
Q 018437 54 GNPRLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTP-VADDKTA-VGVGTVGSSEAI 130 (356)
Q Consensus 54 ~~~~~~l~~~~~~~-~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~-~~~~t~Ggt~a~ 130 (356)
++..++|..+.+.. +++.+.+++.+.+. ....|....+..++++++.+++++.+|.+ .+. . .+++|+|+++++
T Consensus 29 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~-~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~---~~~i~~t~g~~~al 104 (396)
T 3jtx_A 29 GMEAVPLHIGEPKHPTPKVITDALTASLH-ELEKYPLTAGLPELRQACANWLKRRYDGLTVDA---DNEILPVLGSREAL 104 (396)
T ss_dssp TCCCEECSCCSCCSCCCHHHHHHHHHTGG-GGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCT---TTSEEEESSHHHHH
T ss_pred CCCeEEeCCcCCCCCCCHHHHHHHHHHhh-hccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCC---CCeEEEcCCcHHHH
Confidence 44445565555443 45788898888775 33344444567889999999999999975 211 3 589999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEec
Q 018437 131 MLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAIL 210 (356)
Q Consensus 131 ~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~ 210 (356)
..++.++..+ |....+++|+++.++|..+...++..|++++.+|++++++.+|+++|++++++++++|++++
T Consensus 105 ~~~~~~~~~~--------g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~~~~~v~l~~ 176 (396)
T 3jtx_A 105 FSFVQTVLNP--------VSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVWKRTKLVFVCS 176 (396)
T ss_dssp HHHHHHHCCC-----------CCCCEEEEEESCCHHHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHTEEEEEEES
T ss_pred HHHHHHHhCC--------CCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhccCcEEEEEEC
Confidence 9999887532 10000268999999999999999999999999999765578999999999999999999999
Q ss_pred CCCcccccCCHHH---HHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccc-------c-CCCceEEEEcCCcC-
Q 018437 211 GSTLTGEFEDVKL---LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-------R-LPLVKSINVSGHKY- 278 (356)
Q Consensus 211 ~~~~tG~~~~i~~---I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-------~-~~~~Ds~~~~~hK~- 278 (356)
|+||||.+.+.++ |.++|+++ ++++|+|++|+.+... ....... . ..+.+.+..+++|.
T Consensus 177 p~nptG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 247 (396)
T 3jtx_A 177 PNNPSGSVLDLDGWKEVFDLQDKY------GFIIASDECYSEIYFD---GNKPLGCLQAAAQLGRSRQKLLMFTSLSKRS 247 (396)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHH------CCEEEEECTTTTCCST---TCCCCCHHHHHHHTTCCCTTEEEEEESTTTS
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHc------CCEEEEEccccccccC---CCCCchHHhhhhhcccccCcEEEEecccccc
Confidence 9999999976554 99999999 9999999999875441 1111111 0 14567888899995
Q ss_pred CCCCcCeeEEEEe
Q 018437 279 GLVYAGVGWVVWR 291 (356)
Q Consensus 279 l~~P~g~g~l~~~ 291 (356)
+....++|+++..
T Consensus 248 ~~~G~r~G~~~~~ 260 (396)
T 3jtx_A 248 NVPGLRSGFVAGD 260 (396)
T ss_dssp SCGGGCCEEEEEC
T ss_pred CCcccceEEEEeC
Confidence 4455678988763
No 81
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.85 E-value=9.1e-21 Score=179.73 Aligned_cols=212 Identities=9% Similarity=-0.028 Sum_probs=158.9
Q ss_pred cCCCCcccccccCC-CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHH
Q 018437 53 DGNPRLNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIM 131 (356)
Q Consensus 53 ~~~~~~~l~~~~~~-~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~ 131 (356)
+++..++|..+.+. ++++.+.+++.+.+......|.. .+ .++++++.+++.+.+|.+.+. ..+++|+||++|+.
T Consensus 21 ~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~---~~i~~t~g~~~a~~ 95 (377)
T 3fdb_A 21 YGQGVLPLWVAESDFSTCPAVLQAITDAVQREAFGYQP-DG-SLLSQATAEFYADRYGYQARP---EWIFPIPDVVRGLY 95 (377)
T ss_dssp SCTTSEECCSSCCCSCCCHHHHHHHHHHHHTTCCSSCC-SS-CCHHHHHHHHHHHHHCCCCCG---GGEEEESCHHHHHH
T ss_pred cCCCeeeecccCCCCCCCHHHHHHHHHHHHcCCCCCCC-CC-HHHHHHHHHHHHHHhCCCCCH---HHEEEeCChHHHHH
Confidence 44444455555443 34578899988887653333433 34 678888888888888866422 45899999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecC
Q 018437 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILG 211 (356)
Q Consensus 132 ~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~ 211 (356)
.++.++.++ +++|+++.++|.++...++..|++++.+|++++ +|+++|++++++++++|++++|
T Consensus 96 ~~~~~~~~~-------------gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~d~~~l~~~l~~~~~~v~i~~p 159 (377)
T 3fdb_A 96 IAIDHFTPA-------------QSKVIVPTPAYPPFFHLLSATQREGIFIDATGG---INLHDVEKGFQAGARSILLCNP 159 (377)
T ss_dssp HHHHHHSCT-------------TCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS---CCHHHHHHHHHTTCCEEEEESS
T ss_pred HHHHHhcCC-------------CCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC---CCHHHHHHHhccCCCEEEEeCC
Confidence 999887532 478999999999999999999999999999863 9999999999988999999999
Q ss_pred CCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc---CCCceEEEEcCCcCCC-CCcC
Q 018437 212 STLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR---LPLVKSINVSGHKYGL-VYAG 284 (356)
Q Consensus 212 ~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~---~~~~Ds~~~~~hK~l~-~P~g 284 (356)
+||||.+.| +++|.++|+++ ++++|+|++|+.+... .......+. ....+.+..+.+|+++ ....
T Consensus 160 ~nptG~~~~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r 231 (377)
T 3fdb_A 160 YNPLGMVFAPEWLNELCDLAHRY------DARVLVDEIHAPLVFD--GQHTVAAGVSDTAASVCITITAPSKAWNIAGLK 231 (377)
T ss_dssp BTTTTBCCCHHHHHHHHHHHHHT------TCEEEEECTTGGGBSS--SCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHc------CCEEEEEcccchhhcC--CCCCcccHHHccCCCcEEEEEeChHhccCcchh
Confidence 999999964 67777889999 9999999999875441 101112221 1234467788999984 4456
Q ss_pred eeEEEEeCC
Q 018437 285 VGWVVWRTK 293 (356)
Q Consensus 285 ~g~l~~~~~ 293 (356)
+|++++.++
T Consensus 232 ~G~~~~~~~ 240 (377)
T 3fdb_A 232 CAQIIFSNP 240 (377)
T ss_dssp CEEEECCSH
T ss_pred heEEEeCCH
Confidence 887776543
No 82
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.85 E-value=6.7e-20 Score=173.80 Aligned_cols=198 Identities=14% Similarity=0.046 Sum_probs=153.6
Q ss_pred CChHHHHHHHHHHhccc---CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKN---YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~---~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (356)
++++.+.+++.+.+... ...|..... .++++.+.+++.+.+|.+.+. ..+++|+|+++++..++.++.++
T Consensus 43 ~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~---~~v~~~~G~~~al~~~~~~l~~~--- 115 (369)
T 3cq5_A 43 PPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTR---DNLWAANGSNEILQQLLQAFGGP--- 115 (369)
T ss_dssp CCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCG---GGEEEESHHHHHHHHHHHHHCST---
T ss_pred CCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCCh---HhEEECCChHHHHHHHHHHhcCC---
Confidence 34577888887776542 233333223 688889888888887765321 35899999999999998877432
Q ss_pred HHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh-CceEEEEecCCCcccccCCHH
Q 018437 144 KRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVK 222 (356)
Q Consensus 144 ~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~i~ 222 (356)
+++|+++.++|.++...++..|++++.+|.+++ +.+|+++|++++++ ++++|++++++||||.+.|++
T Consensus 116 ----------gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~ 184 (369)
T 3cq5_A 116 ----------GRTALGFQPSYSMHPILAKGTHTEFIAVSRGAD-FRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLD 184 (369)
T ss_dssp ----------TCEEEEEESSCTHHHHHHHHTTCEEEEEECCTT-SSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHH
T ss_pred ----------CCEEEEcCCChHHHHHHHHHcCCEEEEecCCcC-CCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHH
Confidence 578999999999999999999999999998754 79999999999987 899999999999999999999
Q ss_pred HHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccc-cCCC-ceEEEEcCCcCCCCC-cCeeEEEEeC
Q 018437 223 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPL-VKSINVSGHKYGLVY-AGVGWVVWRT 292 (356)
Q Consensus 223 ~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~-~Ds~~~~~hK~l~~P-~g~g~l~~~~ 292 (356)
++.++|+.+ ++++++|++|+.+..+ .. ...+ ...+ .+.+..++||+++.| ..+|+++.++
T Consensus 185 ~l~~l~~~~------~~~li~De~~~~~~~~---~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 247 (369)
T 3cq5_A 185 DVERIINVA------PGIVIVDEAYAEFSPS---PS-ATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANP 247 (369)
T ss_dssp HHHHHHHHC------SSEEEEECTTGGGCCS---CC-GGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECT
T ss_pred HHHHHHHhC------CCEEEEECCchhhcCC---cc-hHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCH
Confidence 999999999 9999999999876531 11 1121 1123 567888999998533 4579998853
No 83
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.85 E-value=1.4e-20 Score=178.79 Aligned_cols=216 Identities=12% Similarity=-0.051 Sum_probs=158.5
Q ss_pred cCCCCcccccccCCC-ChHHHHHHHHHHhccc-CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHH
Q 018437 53 DGNPRLNLASFVTTW-MEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAI 130 (356)
Q Consensus 53 ~~~~~~~l~~~~~~~-~~~~v~~~i~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~ 130 (356)
.++..++|..+.+.. +++.+.+++.+.+... ...|....+..++++++.+++.+.+|++.+. ...+++|+|+++++
T Consensus 23 ~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~--~~~v~~~~g~~~a~ 100 (376)
T 2dou_A 23 RGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDP--RREALALIGSQEGL 100 (376)
T ss_dssp TTCCCEECSSCCCCCCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCT--TTSEEEESSHHHHH
T ss_pred cCCCEEeccCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CccEEEcCCcHHHH
Confidence 344444555554443 4578889888877542 2233333466788888888888888986311 12589999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEec
Q 018437 131 MLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAIL 210 (356)
Q Consensus 131 ~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~ 210 (356)
..++.++.++ +++|+++.++|..+...++..|++++.+|+ ++++.+|+++|++++++++++|++++
T Consensus 101 ~~~~~~l~~~-------------gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~d~~~l~~~l~~~~~~v~l~~ 166 (376)
T 2dou_A 101 AHLLLALTEP-------------EDLLLLPEVAYPSYFGAARVASLRTFLIPL-REDGLADLKAVPEGVWREAKVLLLNY 166 (376)
T ss_dssp HHHHHHHCCT-------------TCEEEEESSCCHHHHHHHHHTTCEEEEECB-CTTSSBCGGGSCHHHHHHEEEEEECS
T ss_pred HHHHHHhcCC-------------CCEEEECCCCcHhHHHHHHHcCCEEEEeeC-CCCCCCCHHHHHHhhccCceEEEECC
Confidence 9998877432 478999999999999999999999999998 44478999999999988889999999
Q ss_pred CCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCC-CCcCe
Q 018437 211 GSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGL-VYAGV 285 (356)
Q Consensus 211 ~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~-~P~g~ 285 (356)
|+||||.+.| +++|.++|+++ ++++|+|++|+.+...- .+.....+. ..+.+.+..+++|+++ ....+
T Consensus 167 p~nptG~~~~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 239 (376)
T 2dou_A 167 PNNPTGAVADWGYFEEALGLARKH------GLWLIHDNPYVDQVYEG-EAPSPLALPGAKERVVELFSLSKSYNLAGFRL 239 (376)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHT------TCEEEEECTTGGGBSSS-CCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCC
T ss_pred CCCCcCccCCHHHHHHHHHHHHHc------CCEEEEEccchhcccCC-CCCChhhcCCCCCcEEEEecchhhcCChhhee
Confidence 9999999966 67889999999 99999999998765310 000011111 1245677788999875 33458
Q ss_pred eEEEEe
Q 018437 286 GWVVWR 291 (356)
Q Consensus 286 g~l~~~ 291 (356)
|+++.+
T Consensus 240 G~~~~~ 245 (376)
T 2dou_A 240 GFALGS 245 (376)
T ss_dssp EEEEEC
T ss_pred EEEecC
Confidence 998764
No 84
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.85 E-value=1.8e-20 Score=179.52 Aligned_cols=210 Identities=13% Similarity=0.039 Sum_probs=161.7
Q ss_pred cccccccCC--CChHHHHHHHHHHhccc-CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHH
Q 018437 58 LNLASFVTT--WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (356)
Q Consensus 58 ~~l~~~~~~--~~~~~v~~~i~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (356)
++|..+.+. ++++.+.+++.+.+... ...|....+..++++++.+++++.+|.+.+. ...+++|+||++|+..++
T Consensus 42 id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~--~~~i~~~~g~~~a~~~~~ 119 (407)
T 3nra_A 42 VDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDA--RDGLIITPGTQGALFLAV 119 (407)
T ss_dssp EETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCT--TTSEEEESHHHHHHHHHH
T ss_pred eeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCcEEEeCCcHHHHHHHH
Confidence 455543333 44577888887776532 1134445577889999999999999986311 125899999999999998
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec-----CCccccCHHHHHHHHhhCceEEEEe
Q 018437 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-----EGYYVMNPVKAVELVDENTICVAAI 209 (356)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~-----~~~~~~d~~~L~~~i~~~~~~v~~~ 209 (356)
.++..+ +++|+++.++|.++...++..|++++.+|++ ++++.+|+++|++++++++++|+++
T Consensus 120 ~~l~~~-------------gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~ 186 (407)
T 3nra_A 120 AATVAR-------------GDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFS 186 (407)
T ss_dssp HTTCCT-------------TCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEE
T ss_pred HHhCCC-------------CCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEc
Confidence 876432 5789999999999999999999999999983 2358999999999999889999999
Q ss_pred cCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-----CCCceEEEEcCCcCCC-
Q 018437 210 LGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-----LPLVKSINVSGHKYGL- 280 (356)
Q Consensus 210 ~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-----~~~~Ds~~~~~hK~l~- 280 (356)
+|+||||.+.| +++|.++|+++ ++++|+|++|+.+... ......+. ....+.+..+++|+++
T Consensus 187 ~p~nptG~~~~~~~l~~i~~~~~~~------~~~li~Dea~~~~~~~---g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 257 (407)
T 3nra_A 187 NPNNPAGVVYSAEEIGQIAALAARY------GATVIADQLYSRLRYA---GASYTHLRAEAAVDAENVVTIMGPSKTESL 257 (407)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEECTTTTSBCT---TCCCCCGGGCTTSCGGGEEEEECSSSTTCC
T ss_pred CCCCCCCcccCHHHHHHHHHHHHHc------CCEEEEEccccccccC---CCCCCChhhcCcccCCcEEEEeCcccccCC
Confidence 99999999988 99999999999 9999999999876542 11111111 1345688889999986
Q ss_pred CCcCeeEEEEe
Q 018437 281 VYAGVGWVVWR 291 (356)
Q Consensus 281 ~P~g~g~l~~~ 291 (356)
...++|+++.+
T Consensus 258 ~G~r~G~~~~~ 268 (407)
T 3nra_A 258 SGYRLGVAFGS 268 (407)
T ss_dssp GGGCCEEEEEC
T ss_pred CeeeEEEEEcC
Confidence 44678888764
No 85
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.85 E-value=2.8e-21 Score=181.57 Aligned_cols=198 Identities=15% Similarity=0.120 Sum_probs=146.8
Q ss_pred cccccCCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHH
Q 018437 60 LASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (356)
Q Consensus 60 l~~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~ 139 (356)
|.+..+.++++.+.+++.+.+......+ +...+.+++++++++++| +. ..+++|+||++|+..++.++++
T Consensus 12 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~----~~~~~~~~l~~~la~~~g-~~-----~~v~~~~~gt~a~~~al~~~~~ 81 (356)
T 1v72_A 12 FSSDNIAGASPEVAQALVKHSSGQAGPY----GTDELTAQVKRKFCEIFE-RD-----VEVFLVPTGTAANALCLSAMTP 81 (356)
T ss_dssp CSCGGGCCCCHHHHHHHHHTTSSCCCST----TCSHHHHHHHHHHHHHHT-SC-----CEEEEESCHHHHHHHHHHTSCC
T ss_pred eccCCccCCCHHHHHHHHhhccCccccc----ccchHHHHHHHHHHHHhC-CC-----CcEEEeCCccHHHHHHHHHhcC
Confidence 3333444566888888887653211111 224566788899999999 32 2379999999999999887643
Q ss_pred HHHHHHHhcCCCCCCCeEEecCCCcchHHHH--HHhh--CCeeEEEEecCCccccCHHHHHH-HHhh-------CceEEE
Q 018437 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEKF--ARYF--EVELKEVKLEEGYYVMNPVKAVE-LVDE-------NTICVA 207 (356)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~--~~~~--G~~v~~v~~~~~~~~~d~~~L~~-~i~~-------~~~~v~ 207 (356)
+ +++|+++.++|+++... +... |++++.+|.+ ++.+|+++|++ ++++ ++++|+
T Consensus 82 ~-------------gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~d~~~l~~~~i~~~~~~~~~~~~~v~ 146 (356)
T 1v72_A 82 P-------------WGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP--AAKLDIVRLRERTREKVGDVHTTQPACVS 146 (356)
T ss_dssp T-------------TEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG--GGCCCHHHHHHHTTSSTTCTTSCEEEEEE
T ss_pred C-------------CCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC--CCeEcHHHHHHHhhhcchhhccCCceEEE
Confidence 2 57899999999987766 7777 9999999876 37999999999 8875 578999
Q ss_pred EecCCCcccc---cCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccC-CCceEEEEcCCcCCCCCc
Q 018437 208 AILGSTLTGE---FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL-PLVKSINVSGHKYGLVYA 283 (356)
Q Consensus 208 ~~~~~~~tG~---~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~-~~~Ds~~~~~hK~l~~P~ 283 (356)
+++++| +|. .+++++|.++|++| |+++|+|++|+.+...+... ....+.. .++|.+++++||+ ++|.
T Consensus 147 ~~~~~~-tG~~~~~~~l~~i~~~~~~~------~~~li~D~a~~~~~~~~~~~-~~~~~~~~~~~d~~~~s~sK~-g~~~ 217 (356)
T 1v72_A 147 ITQATE-VGSIYTLDEIEAIGDVCKSS------SLGLHMDGSRFANALVSLGC-SPAEMTWKAGVDALSFGATKN-GVLA 217 (356)
T ss_dssp EESSCT-TSCCCCHHHHHHHHHHHHHT------TCEEEEEETTHHHHHHHHTC-CTTTTTGGGTCCEEEECCGGG-TCSS
T ss_pred EEcCCC-CCccCCHHHHHHHHHHHHHc------CCeEEEEchhhHhHhccCCC-CHHHhhhhhcCCEEEEecccC-CCcC
Confidence 999875 999 57789999999999 99999999997543211111 1111111 3689999999999 5798
Q ss_pred CeeEEEEe
Q 018437 284 GVGWVVWR 291 (356)
Q Consensus 284 g~g~l~~~ 291 (356)
|+|+++.+
T Consensus 218 G~g~~~~~ 225 (356)
T 1v72_A 218 AEAIVLFN 225 (356)
T ss_dssp CEEEEESS
T ss_pred ccEEEEEC
Confidence 88888763
No 86
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.85 E-value=3.1e-20 Score=177.21 Aligned_cols=199 Identities=9% Similarity=-0.015 Sum_probs=151.7
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHH-HHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTE-LQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~-le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (356)
.+++.+.+++.+.++.....|... ..+ +++++.+++.+.+|.+.+. ..+++|+|+++++..++.++..+
T Consensus 41 ~~~~~v~~a~~~~~~~~~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~---~~v~~t~g~~~al~~~~~~l~~~----- 110 (390)
T 1d2f_A 41 ATAPCIIEALNQRLMHGVFGYSRW--KNDEFLAAIAHWFSTQHYTAIDS---QTVVYGPSVIYMVSELIRQWSET----- 110 (390)
T ss_dssp CCCHHHHHHHHHHHTTCCCCCCCS--CCHHHHHHHHHHHHHHSCCCCCG---GGEEEESCHHHHHHHHHHHSSCT-----
T ss_pred CCCHHHHHHHHHHHhCCCCCCCCC--ChHHHHHHHHHHHHHhcCCCCCH---HHEEEcCCHHHHHHHHHHHhcCC-----
Confidence 345788999888876433333332 556 8888888888888854321 35899999999999998877432
Q ss_pred HhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCC--ccccCHHHHHHHHhh-CceEEEEecCCCcccccCC--
Q 018437 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG--YYVMNPVKAVELVDE-NTICVAAILGSTLTGEFED-- 220 (356)
Q Consensus 146 ~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~--~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~-- 220 (356)
+++|+++.++|..+...++..|++++.+|++.+ ++.+|+++|++++++ ++++|++++|+||||.+.|
T Consensus 111 --------gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~ 182 (390)
T 1d2f_A 111 --------GEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCD 182 (390)
T ss_dssp --------TCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTT
T ss_pred --------CCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcCHH
Confidence 478999999999999999999999999998643 357999999999986 7899999999999999966
Q ss_pred -HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-C-CCc-eEEEEcCCcCCC-CCcCeeEEEEeCC
Q 018437 221 -VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-L-PLV-KSINVSGHKYGL-VYAGVGWVVWRTK 293 (356)
Q Consensus 221 -i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~-~~~-Ds~~~~~hK~l~-~P~g~g~l~~~~~ 293 (356)
+++|.++|+++ |+++|+|++|+.+... ......+. . ... |. ..+++|+++ ....+|+++++++
T Consensus 183 ~l~~l~~~~~~~------~~~li~De~~~~~~~~---g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~ 250 (390)
T 1d2f_A 183 ELEIMADLCERH------GVRVISDEIHMDMVWG---EQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENS 250 (390)
T ss_dssp HHHHHHHHHHHT------TCEEEEECTTTTCBCS---SSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSH
T ss_pred HHHHHHHHHHHc------CCEEEEEccccccccC---CCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECCH
Confidence 89999999999 9999999999876431 11111221 1 122 66 888999975 3345799988643
No 87
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.85 E-value=7.4e-22 Score=187.00 Aligned_cols=247 Identities=15% Similarity=0.014 Sum_probs=176.6
Q ss_pred cccCCCChHHHHHHHHHHhcc---cCCC----cccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEE-eCChhHHHHHH
Q 018437 62 SFVTTWMEPECDKLVMASINK---NYVD----MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG-TVGSSEAIMLA 133 (356)
Q Consensus 62 ~~~~~~~~~~v~~~i~~~~~~---~~~~----~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~-t~Ggt~a~~~a 133 (356)
.-.|++.++.|.+++...+.. |+.. ...++.+.++.+++++.+++++|++++ ..++| |+|||+++.++
T Consensus 10 ~pgpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~----~~v~f~t~~~T~a~n~~ 85 (361)
T 3m5u_A 10 SAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDD----YEVLFLQGGASLQFAMI 85 (361)
T ss_dssp CSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTT----EEEEEESSHHHHHHHHH
T ss_pred cCCCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCC----ceEEEEcCcHHHHHHHH
Confidence 445667788999999887653 2221 112446678888999999999999742 23677 99999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCC---eEEecCCCcchHHHHHHhhCCeeEEEEecCCccc--cCHHHHHHHHhhCceEEEE
Q 018437 134 GLAFKRKWQQKRKEQGKPYDKP---NIVTGANVQVCWEKFARYFEVELKEVKLEEGYYV--MNPVKAVELVDENTICVAA 208 (356)
Q Consensus 134 l~~~~~~~~~~~~~~g~~~~~~---~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~--~d~~~L~~~i~~~~~~v~~ 208 (356)
+..+. + ++ .|+.+..+|. +...++..|++++.++++++ +. ++++. + |++++++|.+
T Consensus 86 ~~~~~-~-------------~~~~~~i~~~~~~~~-~~~~a~~~G~~v~~~~~~~~-g~~~~~~~~--~-l~~~t~lv~~ 146 (361)
T 3m5u_A 86 PMNLA-L-------------NGVCEYANTGVWTKK-AIKEAQILGVNVKTVASSEE-SNFDHIPRV--E-FSDNADYAYI 146 (361)
T ss_dssp HHHHC-C-------------SSCEEEEECSHHHHH-HHHHHHHTTCCEEEEEECTT-TTSCSCCCC--C-CCTTSSEEEE
T ss_pred HHhcC-C-------------CCeEEEEeCCHHHHH-HHHHHHHcCCceEEEecccC-cCCCcCChh--h-cCCCCCEEEE
Confidence 88764 2 22 3455555664 34455667999999999875 43 56666 4 8889999999
Q ss_pred ecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEE
Q 018437 209 ILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWV 288 (356)
Q Consensus 209 ~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l 288 (356)
++.+|.+|++.|. +++ + ++++|||++++.+..| ++++ .+|.+++++|||+ +|.|+|++
T Consensus 147 ~~~e~~tG~~~~~-----i~~-~------~~~~~vD~~q~~g~~~-------id~~--~~d~~~~s~~K~~-gp~G~g~l 204 (361)
T 3m5u_A 147 CSNNTIYGTQYQN-----YPK-T------KTPLIVDASSDFFSRK-------VDFS--NIALFYGGVQKNA-GISGLSCI 204 (361)
T ss_dssp ESEETTTTEECSS-----CCC-C------SSCEEEECGGGTTSSC-------CCCT--TEEEEEEETTTTS-SCTTCEEE
T ss_pred eCCCCCcceeCCc-----ccc-c------CCEEEEEcccccCCCC-------CCcc--cCCEEEEechhcc-CCCccEEE
Confidence 9999999998552 232 5 8999999999876653 4543 5899999999999 69999999
Q ss_pred EEeCCCCCcccccc--ccCCCCCC--CCCccccCCCChhHHHHHHHHHHHhCHH-HHHHHHHHHHhccCccc
Q 018437 289 VWRTKDDLPDELVF--HINYLGSD--QPTFTLNFSKGSSQIIAQYYQFIRLGFE-EITFTFISSLKVCPFLV 355 (356)
Q Consensus 289 ~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~tr~~~~~~~~~~~l~~lg~~-G~~~~~~~~~~~a~~l~ 355 (356)
+++++.. +.+.. .+.++... .......+|.+...++++.++++.+-.+ |++++.++..+++++|.
T Consensus 205 ~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~ 274 (361)
T 3m5u_A 205 FIRKDML--ERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLY 274 (361)
T ss_dssp EEEHHHH--HHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred EEcHHHH--hhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 9986421 11100 11121110 0011234799998899999999998887 89999999999888764
No 88
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.85 E-value=1.1e-20 Score=178.67 Aligned_cols=248 Identities=14% Similarity=0.026 Sum_probs=170.6
Q ss_pred cCCCChHHHHHHHHHHhcccCC-------CcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 64 VTTWMEPECDKLVMASINKNYV-------DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 64 ~~~~~~~~v~~~i~~~~~~~~~-------~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
.+.++++.+.+++.+++..... ....++...++.+++++++++++|++++. ...++|+||++++..++.+
T Consensus 11 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~---~~i~~t~g~t~a~~~~~~~ 87 (362)
T 2c0r_A 11 GPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGY---KVLFIQGGASTQFAMIPMN 87 (362)
T ss_dssp SSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSE---EEEEESSHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCc---EEEEECCCchHHHHHHHHh
Confidence 3556778899999887753210 11124566778889999999999997410 1246789999999999988
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcch--HHHHHHhhCCeeEEEEecC---CccccCHHHHHHHHhhCceEEEEecC
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVC--WEKFARYFEVELKEVKLEE---GYYVMNPVKAVELVDENTICVAAILG 211 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s--~~~~~~~~G~~v~~v~~~~---~~~~~d~~~L~~~i~~~~~~v~~~~~ 211 (356)
+.++ +++|+++.+.|++ +...++..| +++.++++. .+..+|.++++ ++++|++|+++++
T Consensus 88 l~~~-------------gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~~t~~v~~~~~ 151 (362)
T 2c0r_A 88 FLKE-------------GQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQDNAAYLHLTSN 151 (362)
T ss_dssp HCCT-------------TCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCTTEEEEEEESE
T ss_pred cCCC-------------CCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCCCcCEEEEeCC
Confidence 7432 4688877776665 346677789 999999872 11245766654 6778999999999
Q ss_pred CCccccc-CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEE
Q 018437 212 STLTGEF-EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (356)
Q Consensus 212 ~~~tG~~-~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~ 290 (356)
+|+||.+ .|+++| + ++++|+|++|+.+..+ .++. ..|.++.++|||+ +|.|+|++++
T Consensus 152 ~n~tG~~~~~l~~i------~------~~~vivD~a~~~~~~~-------~~~~--~~d~~~~s~~K~~-g~~G~G~l~~ 209 (362)
T 2c0r_A 152 ETIEGAQFKAFPDT------G------SVPLIGDMSSDILSRP-------FDLN--QFGLVYAGAQKNL-GPSGVTVVIV 209 (362)
T ss_dssp ETTTTEECSSCCCC------T------TSCEEEECTTTTTSSC-------CCGG--GCSEEEEETTTTT-CCSSCEEEEE
T ss_pred cCccceeccccccc------C------CCEEEEEChhhccCCc-------cchh--HCcEEEEeccccc-cCcCcEEEEE
Confidence 9999995 888887 7 9999999999865442 2332 2389999999998 5889999999
Q ss_pred eCCCCCccccccc-cCCCCCC--CCCccccCCCChhHHHHHHHHHHHhCHH-HHHHHHHHHHhccCcc
Q 018437 291 RTKDDLPDELVFH-INYLGSD--QPTFTLNFSKGSSQIIAQYYQFIRLGFE-EITFTFISSLKVCPFL 354 (356)
Q Consensus 291 ~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~tr~~~~~~~~~~~l~~lg~~-G~~~~~~~~~~~a~~l 354 (356)
+++ .. +.+... +.+.... .......+|.+....+++.++++.+... |++++.++..+++++|
T Consensus 210 ~~~-~~-~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l 275 (362)
T 2c0r_A 210 RED-LV-AESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLI 275 (362)
T ss_dssp EGG-GS-SSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred cHH-HH-hhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 764 22 111110 1111000 0000123567766678888888877665 7888888888777765
No 89
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.85 E-value=1.8e-20 Score=178.82 Aligned_cols=188 Identities=12% Similarity=0.041 Sum_probs=140.1
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHH-HHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHH-HHHHHHHH
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMI-AHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF-KRKWQQKR 145 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~l-a~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~-~~~~~~~~ 145 (356)
+++.+.+++.+.+..+...+ ..+...++|+ .+ ++++|.. ...++++|||+|+..++.++ ..+
T Consensus 14 ~~~~i~~a~~~~~~~~~~~~-~~~~~~~l~~----~~~a~~~g~~------~~~v~~~sgt~al~~al~~l~~~~----- 77 (377)
T 3ju7_A 14 PVIEYLDELKEIDASHIYTN-YGPINQRFEQ----TIMSGFFQNR------GAVTTVANATLGLMAAIQLKKRKK----- 77 (377)
T ss_dssp CGGGGHHHHHHHHHHTCCSS-SCHHHHHHHH----HHHHHTSTTC------SEEEEESCHHHHHHHHHHHHSCTT-----
T ss_pred CcHHHHHHHHHHHHcCCccc-CCHHHHHHHH----HHHHHHhCCC------CeEEEeCCHHHHHHHHHHHcCCCC-----
Confidence 34567788877776543221 2344555554 47 8899832 12789999999999998876 332
Q ss_pred HhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHH-hhC--ceEEEEecCCCcccccCCHH
Q 018437 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV-DEN--TICVAAILGSTLTGEFEDVK 222 (356)
Q Consensus 146 ~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i-~~~--~~~v~~~~~~~~tG~~~~i~ 222 (356)
+++|+++.++|.++..++...|+++++++++++++.+|+++|++++ +++ |++|+ ++|++|.+.|++
T Consensus 78 --------Gd~Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~~~ 146 (377)
T 3ju7_A 78 --------GKYALMPSFTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMNLE 146 (377)
T ss_dssp --------CCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCCCH
T ss_pred --------cCEEEECCCCcHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccCHH
Confidence 5799999999999999999999999999998656999999999998 666 88776 678899999999
Q ss_pred HHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCC
Q 018437 223 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 223 ~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~ 293 (356)
+|.++|+ + |+++|+|++|+.+.. ... ....-....++.+++++||++.+ ...|+++.+++
T Consensus 147 ~i~~la~-~------~~~vi~D~a~a~g~~--~~~-~~~g~~~~d~~~~S~~~~K~l~~-g~gG~~~~~~~ 206 (377)
T 3ju7_A 147 EYEELEK-K------GVPVVVDAAPGFGLM--NGG-MHYGQDFSGMIIYSFHATKPFGI-GEGGLIYSKNE 206 (377)
T ss_dssp HHHHHHH-T------TCCBEEECTTCTTCE--ETT-EETTTTCSSEEEEECBTTSSSCC-BSCEEEEESCH
T ss_pred HHHHHHh-c------CCEEEEECCCccCCe--ECC-EeccCCCCcEEEEECCCCCcCCC-CCcEEEEECCH
Confidence 9999999 9 999999999975433 111 11100113467777778999976 45577766654
No 90
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.85 E-value=6.3e-21 Score=182.20 Aligned_cols=185 Identities=11% Similarity=0.077 Sum_probs=140.0
Q ss_pred HHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHH-HHHHHHHHHhc
Q 018437 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF-KRKWQQKRKEQ 148 (356)
Q Consensus 70 ~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~-~~~~~~~~~~~ 148 (356)
+.+.+++.+.+..+.+. ...+... ++++.+++++|.+. +++++|||+|+..++.++ ..+
T Consensus 36 ~~~~~a~~~~~~~~~~~-~~~~~~~----~l~~~la~~~~~~~-------~i~~~~gt~al~~~l~~~~~~~-------- 95 (391)
T 3dr4_A 36 GNERDYVLECMDTTWIS-SVGRFIV----EFEKAFADYCGVKH-------AIACNNGTTALHLALVAMGIGP-------- 95 (391)
T ss_dssp SSHHHHHHHHHHHTCCS-SCSHHHH----HHHHHHHHHHTCSE-------EEEESSHHHHHHHHHHHHTCCT--------
T ss_pred HHHHHHHHHHHHcCCcc-CCChHHH----HHHHHHHHHhCCCc-------EEEeCCHHHHHHHHHHHcCCCC--------
Confidence 56677777666543322 1333444 45556888888863 789999999999999877 321
Q ss_pred CCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHH
Q 018437 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLL 228 (356)
Q Consensus 149 g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~ 228 (356)
+++|+++.++|.++..+++..|++++.++++++++.+|+++|++++++++++|+ ++|+||.+.|+++|.++|
T Consensus 96 -----gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~~~~~~i~~l~ 167 (391)
T 3dr4_A 96 -----GDEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITPRTKAIM---PVHLYGQICDMDPILEVA 167 (391)
T ss_dssp -----TCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGSGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHH
T ss_pred -----cCEEEECCCchHHHHHHHHHCCCEEEEEecCccccCcCHHHHHHhcCCCceEEE---EECCCCChhhHHHHHHHH
Confidence 579999999999999999999999999999865689999999999998888776 578999999999999999
Q ss_pred HHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCC
Q 018437 229 TKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 229 ~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~ 293 (356)
+++ |+++|+|++|+.+... .+. ... ....+++++++.||++.++ ..|+++.+++
T Consensus 168 ~~~------~~~li~D~a~~~g~~~--~~~-~~~-~~~di~~~S~s~~K~l~~g-~gg~~~~~~~ 221 (391)
T 3dr4_A 168 RRH------NLLVIEDAAEAVGATY--RGK-KSG-SLGDCATFSFFGNAIITTG-EGGMITTNDD 221 (391)
T ss_dssp HHT------TCEEEEECTTCTTCEE--TTE-ETT-SSSSEEEEECBTTSSSCCB-SCEEEEESCH
T ss_pred HHc------CCEEEEECcccccceE--CCe-eec-ccCCEEEEECCCCCcCCcC-CeEEEEECCH
Confidence 999 9999999999854431 111 010 1224677777799999664 4567666543
No 91
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.85 E-value=2.9e-20 Score=177.26 Aligned_cols=186 Identities=12% Similarity=0.064 Sum_probs=142.4
Q ss_pred hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHH-HHHHHHHHHh
Q 018437 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF-KRKWQQKRKE 147 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~-~~~~~~~~~~ 147 (356)
.+.+.+++.+.+..+...+...+...+ +++.+++++|.+. .+++++||+|+.+++.++ ..+
T Consensus 16 ~~~~~~a~~~~l~~~~~~~~~~~~~~~----l~~~la~~~~~~~-------~i~~~sGt~al~~~l~~l~~~~------- 77 (388)
T 1b9h_A 16 DDAERNGLVRALEQGQWWRMGGDEVNS----FEREFAAHHGAAH-------ALAVTNGTHALELALQVMGVGP------- 77 (388)
T ss_dssp CHHHHHHHHHHHHTSCCBTTTCSHHHH----HHHHHHHHTTCSE-------EEEESCHHHHHHHHHHHTTCCT-------
T ss_pred CHHHHHHHHHHHHcCCeeecCCHHHHH----HHHHHHHHhCCCe-------EEEeCCHHHHHHHHHHHcCCCC-------
Confidence 377888888887653222333344444 4555888888762 345555699999999876 221
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHH
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDL 227 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i 227 (356)
+++|+++.++|.++..+++..|++++.++++++++.+|+++|++++++++++|+ ++|++|.+.|+++|.++
T Consensus 78 ------gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~l 148 (388)
T 1b9h_A 78 ------GTEVIVPAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPRTKVIM---PVHMAGLMADMDALAKI 148 (388)
T ss_dssp ------TCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHH
T ss_pred ------cCEEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcCceEEE---EeCCccCcCCHHHHHHH
Confidence 468999999999999999999999999999875589999999999988887776 89999999999999999
Q ss_pred HHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCCCCcCeeEEEEeCC
Q 018437 228 LTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 228 ~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~ 293 (356)
|+++ |+++|+|++|+.+..+ .. .++. ...++.++++.||++.++ ..|+++.+++
T Consensus 149 a~~~------~~~li~D~a~~~g~~~--~~---~~~~~~~~i~~~S~s~~K~l~g~-~~G~~~~~~~ 203 (388)
T 1b9h_A 149 SADT------GVPLLQDAAHAHGARW--QG---KRVGELDSIATFSFQNGKLMTAG-EGGAVVFPDG 203 (388)
T ss_dssp HHHH------TCCBCEECTTCTTCEE--TT---EEGGGSSSCEEEECCTTSSSCSS-SCEEEEECTT
T ss_pred HHHc------CCEEEEecchhcCCcc--CC---eecccccceEEEEccCCCcccCC-CeEEEEECCH
Confidence 9999 9999999999864431 11 1122 224788889999998665 4688887654
No 92
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.84 E-value=3.8e-20 Score=174.95 Aligned_cols=203 Identities=13% Similarity=0.012 Sum_probs=150.8
Q ss_pred cccccccCC-CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 58 LNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 58 ~~l~~~~~~-~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
++|....+. ++++.+.+++.+.+.... .|..... . ++++.+++++|++. ..+++|+||++++..++.+
T Consensus 33 i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~y~~~~~-~----~lr~~la~~~~~~~-----~~v~~~~g~~~a~~~~~~~ 101 (365)
T 3get_A 33 IKLASNENPFGTPPKAIECLRQNANKAH-LYPDDSM-I----ELKSTLAQKYKVQN-----ENIIIGAGSDQVIEFAIHS 101 (365)
T ss_dssp EECSSCCCTTCSCHHHHHHHHHHGGGTT-SCCCTTC-H----HHHHHHHHHHTCCG-----GGEEEESSHHHHHHHHHHH
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHhhc-cCCCCCh-H----HHHHHHHHHhCCCc-----ceEEECCCHHHHHHHHHHH
Confidence 344444333 356789999988876322 2222222 3 45666888889865 3489999999999999887
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCccc
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG 216 (356)
+.++ +++|+++.++|..+...++..|++++.+|++++++ +|+++|++++++++++|++++|+||||
T Consensus 102 l~~~-------------gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG 167 (365)
T 3get_A 102 KLNS-------------KNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNL-DEFKKLYETHKDEIKLIFLCLPNNPLG 167 (365)
T ss_dssp HCCT-------------TCEEEECSSCCTHHHHHHHHHTCEEEECSSSSCCH-HHHHHHHHHTTTTEEEEEEESSCTTTC
T ss_pred HhCC-------------CCEEEEeCCChHHHHHHHHHcCCEEEEEecCCCCC-CCHHHHHHHhCCCCCEEEEcCCCCCCC
Confidence 7432 57999999999999999999999999999833358 999999999999999999999999999
Q ss_pred ccCCHHHHHHHHH--HhhhccCCCCcEEEecccccccc--cccCCCCcccc-cCCCceEEEEcCCcCCC-CCcCeeEEEE
Q 018437 217 EFEDVKLLHDLLT--KKNEETGWDTPIHVDAASGGFIA--PFLYPDLEWDF-RLPLVKSINVSGHKYGL-VYAGVGWVVW 290 (356)
Q Consensus 217 ~~~~i~~I~~i~~--~~~~~~~~~~~l~vD~a~~~~~~--~~~~~~~~~~~-~~~~~Ds~~~~~hK~l~-~P~g~g~l~~ 290 (356)
.+.|++++.++++ ++ ++++++|++|+.+.. .--.+...... .....+.+..++||+++ .+.++|+++.
T Consensus 168 ~~~~~~~l~~l~~~~~~------~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 241 (365)
T 3get_A 168 ECLDASEATEFIKGVNE------DCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIA 241 (365)
T ss_dssp CCCCHHHHHHHHHTSCT------TSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEE
T ss_pred CCcCHHHHHHHHHhCCC------CcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEc
Confidence 9999999999998 66 999999999986552 10000001111 12245677889999975 4567899987
Q ss_pred e
Q 018437 291 R 291 (356)
Q Consensus 291 ~ 291 (356)
.
T Consensus 242 ~ 242 (365)
T 3get_A 242 N 242 (365)
T ss_dssp C
T ss_pred C
Confidence 3
No 93
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.84 E-value=7.9e-21 Score=181.39 Aligned_cols=242 Identities=12% Similarity=-0.055 Sum_probs=163.5
Q ss_pred ChHHHHHHHHHHhcccCCCcc---cCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q 018437 68 MEPECDKLVMASINKNYVDMD---EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~---~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (356)
+++.+.+++.+.+......+. ...+......++++++++++|.+. .+++++|++++..++.++.++
T Consensus 58 ~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~-------~i~~~sGt~a~~~~l~~~~~~---- 126 (399)
T 3tqx_A 58 DHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLGTDD-------TILYSSCFDANGGLFETLLGP---- 126 (399)
T ss_dssp TCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHTCSE-------EEEESCHHHHHHTTHHHHCCT----
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHCCCc-------EEEECchHHHHHHHHHHhcCC----
Confidence 357788887777654221111 112334556678888999999863 566667799999888776432
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh------CceEEEEecCCCccccc
Q 018437 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEF 218 (356)
Q Consensus 145 ~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~ 218 (356)
+++|+++.++|.++...++..|++++.+|. +|+++|++++++ ++++|++++++||||.+
T Consensus 127 ---------gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~ 191 (399)
T 3tqx_A 127 ---------EDAIISDELNHASIIDGIRLCKAQRYRYKN------NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGII 191 (399)
T ss_dssp ---------TCEEEEETTCCHHHHHHHHSCCSEEEEECT------TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEE
T ss_pred ---------CCEEEECCcccHHHHHHHHHcCCceeEeCC------CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCc
Confidence 579999999999999999999999988875 366788888876 79999999999999999
Q ss_pred CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccc-c-CCCceEEEEcCCcCCCCCcCeeEEEEeCCCCC
Q 018437 219 EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-R-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (356)
Q Consensus 219 ~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~-~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~ 296 (356)
.|+++|.++|+++ ++++|+|++|+.++.+.. ....... . ....|.++.++||+++++.| |+++.++ +..
T Consensus 192 ~~l~~i~~l~~~~------~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~~~~-~~~ 262 (399)
T 3tqx_A 192 ADLKSICDLADKY------NALVMVDDSHAVGFIGEN-GRGTPEYCGVADRVDILTGTLGKALGGASG-GYTSGHK-EII 262 (399)
T ss_dssp CCHHHHHHHHHHT------TCEEEEECTTTTTTSSTT-SCCHHHHHTCTTCCSEEEEESSSSSCSSCC-EEEEECH-HHH
T ss_pred CCHHHHHHHHHHc------CCEEEEECCccccccCCC-CCchHHhhCCCCCCcEEEecchHhcccCce-EEEEcCH-HHH
Confidence 9999999999999 999999999964333110 0011111 1 23679999999999876777 8887653 222
Q ss_pred cccccc-ccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 297 PDELVF-HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 297 ~~~~~~-~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
+.+.. ...|.. .++.+....+++..+++.+. ++++++.++..+++++|
T Consensus 263 -~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l 311 (399)
T 3tqx_A 263 -EWLRNRSRPYLF--------SNTVAPVIVATSLKVLELLK-TEGPQLRKQLQENSRYF 311 (399)
T ss_dssp -HHHHHHCHHHHS--------SCCCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHH
T ss_pred -HHHHHhCcceec--------cCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHH
Confidence 12111 011111 12334444555666666553 44555666555555444
No 94
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.84 E-value=9.2e-20 Score=172.16 Aligned_cols=203 Identities=17% Similarity=0.094 Sum_probs=150.4
Q ss_pred cccccccCC-CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHH
Q 018437 58 LNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (356)
Q Consensus 58 ~~l~~~~~~-~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~ 136 (356)
++|....++ ++++.+.+++.+.+.....++ .++. .++++++++++|+++ ..+++|+||++++..++.+
T Consensus 35 i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~--~~~~----~~lr~~la~~~~~~~-----~~v~~~~g~t~a~~~~~~~ 103 (363)
T 3ffh_A 35 TKLSSNENPLGTSKKVAAIQANSSVETEIYP--DGWA----SSLRKEVADFYQLEE-----EELIFTAGVDELIELLTRV 103 (363)
T ss_dssp EECSSCSCTTCCCHHHHHHHHTCBSCCCBC------C----HHHHHHHHHHHTCCG-----GGEEEESSHHHHHHHHHHH
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHHHhhcCC--Ccch----HHHHHHHHHHhCCCh-----hhEEEeCCHHHHHHHHHHH
Confidence 344444333 346788888887664322222 2232 356667888899875 3489999999999999987
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCccc
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG 216 (356)
+.++ +++|+++.++|.++...++..|++++.+|++++ +.+|+++|++++++++++|++++++||||
T Consensus 104 ~~~~-------------gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~v~~~~p~nptG 169 (363)
T 3ffh_A 104 LLDT-------------TTNTVMATPTFVQYRQNALIEGAEVREIPLLQD-GEHDLEGMLNAIDEKTTIVWICNPNNPTG 169 (363)
T ss_dssp HCST-------------TCEEEEEESSCHHHHHHHHHHTCEEEEEECCTT-SCCCHHHHHHHCCTTEEEEEEESSCTTTC
T ss_pred HccC-------------CCEEEEcCCChHHHHHHHHHcCCEEEEecCCCC-CCcCHHHHHHhcccCCCEEEEeCCCCCcC
Confidence 7432 579999999999999999999999999999874 89999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccc-cCCCceEEEEcCCcCCC-CCcCeeEEEEe
Q 018437 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (356)
Q Consensus 217 ~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~Ds~~~~~hK~l~-~P~g~g~l~~~ 291 (356)
.+.|+++|.++++.+.+ |+++|+|++|+.+..+ ........ ....-+.+..+.+|+++ ...++|+++.+
T Consensus 170 ~~~~~~~l~~l~~~~~~----~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~ 240 (363)
T 3ffh_A 170 NYIELADIQAFLDRVPS----DVLVVLDEAYIEYVTP--QPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIAD 240 (363)
T ss_dssp CCCCHHHHHHHHTTSCT----TSEEEEECTTGGGCSS--CCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEEC
T ss_pred CCcCHHHHHHHHHhCCC----CcEEEEeCchHhhcCc--cccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecC
Confidence 99999999999997733 7999999999865431 00001111 12334566778899874 33455999874
No 95
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.84 E-value=3.2e-21 Score=182.85 Aligned_cols=180 Identities=17% Similarity=0.101 Sum_probs=139.2
Q ss_pred HHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHH-HHHHHHHHHhcCC
Q 018437 72 CDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF-KRKWQQKRKEQGK 150 (356)
Q Consensus 72 v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~-~~~~~~~~~~~g~ 150 (356)
+.+++.+.+.... +...+... ++++.+++++|.+. +++++||++|+..++.++ ..
T Consensus 21 ~~~~~~~~~~~~~--~~~~~~~~----~l~~~la~~~~~~~-------~~~~~~gt~a~~~~~~~~~~~----------- 76 (374)
T 3uwc_A 21 YLNDLREFIKTAD--FTLGAELE----KFEKRFAALHNAPH-------AIGVGTGTDALAMSFKMLNIG----------- 76 (374)
T ss_dssp HHHHHHHHHHHTC--CSSCHHHH----HHHHHHHHHTTCSE-------EEEESCHHHHHHHHHHHTTCC-----------
T ss_pred HHHHHHHHHHcCC--cccChhHH----HHHHHHHHHhCCCc-------EEEeCCHHHHHHHHHHHcCCC-----------
Confidence 7777777765432 33334444 45556888888863 789999999999988876 32
Q ss_pred CCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHH
Q 018437 151 PYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTK 230 (356)
Q Consensus 151 ~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~ 230 (356)
.+++|+++.++|.++...++..|++++.+|+++ ++.+|+++|++++++++++|+ ++||+|.+.|+++|.++|++
T Consensus 77 --~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~~~~i~~~~~~ 150 (374)
T 3uwc_A 77 --AGDEVITCANTFIASVGAIVQAGATPVLVDSEN-GYVIDPEKIEAAITDKTKAIM---PVHYTGNIADMPALAKIAKK 150 (374)
T ss_dssp --TTCEEEEESSSCHHHHHHHHHTTCEEEEECBCT-TSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHH
T ss_pred --CCCEEEECCCccHHHHHHHHHcCCEEEEEecCC-CCCcCHHHHHHhCCCCceEEE---EeCCcCCcCCHHHHHHHHHH
Confidence 157999999999999999999999999999984 589999999999988888776 88999999999999999999
Q ss_pred hhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCC--cCCCCCcCeeEEEEeCC
Q 018437 231 KNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGH--KYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 231 ~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~h--K~l~~P~g~g~l~~~~~ 293 (356)
+ ++++|+|++|+.+.. .... .. ....|.++.++| |+++++...|+++.+++
T Consensus 151 ~------~~~li~D~~~~~g~~--~~~~---~~-~~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~ 203 (374)
T 3uwc_A 151 H------NLHIVEDACQTILGR--INDK---FV-GSWGQFACFSLHPLKNLNVWSDAGVIITHSD 203 (374)
T ss_dssp T------TCEEEEECTTCTTCE--ETTE---ET-TSSSSEEEEECSSSSSSCCSSCCEEEEESCH
T ss_pred c------CCEEEEeCCCccCce--eCCe---ec-cccccEEEEeCCCCCcCCccceeEEEEeCCH
Confidence 9 999999999986533 1111 11 112589999977 99865344677766543
No 96
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.84 E-value=7.6e-21 Score=180.28 Aligned_cols=185 Identities=13% Similarity=0.080 Sum_probs=139.9
Q ss_pred hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhc
Q 018437 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (356)
.+.+.+++.+.+.... +...+...+ +++.+++++|.+. +++|+|||+|+..++.+++-
T Consensus 15 ~~~v~~a~~~~~~~~~--~~~~~~~~~----l~~~la~~~~~~~-------~~~~~sGt~al~~al~~~~~--------- 72 (367)
T 3nyt_A 15 KDKIDAGIQRVLRHGQ--YILGPEVTE----LEDRLADFVGAKY-------CISCANGTDALQIVQMALGV--------- 72 (367)
T ss_dssp HHHHHHHHHHHHHHCC--CSSCHHHHH----HHHHHHHHHTCSE-------EEEESCHHHHHHHHHHHTTC---------
T ss_pred CHHHHHHHHHHHhcCC--ccCChHHHH----HHHHHHHHhCCCc-------EEEeCCHHHHHHHHHHHhCC---------
Confidence 3567777777665432 223444444 4455888888863 79999999999999987721
Q ss_pred CCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHH
Q 018437 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLL 228 (356)
Q Consensus 149 g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~ 228 (356)
..+++|+++.++|.++..++...|++++.++++++++.+|+++|++++++++++|+ ++|++|...|+++|.++|
T Consensus 73 ---~~gd~Vi~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~~~~~~i~~la 146 (367)
T 3nyt_A 73 ---GPGDEVITPGFTYVATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAITPRTKAII---PVSLYGQCADFDAINAIA 146 (367)
T ss_dssp ---CTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGTGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHH
T ss_pred ---CCcCEEEECCCccHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHhcCcCCcEEE---eeCCccChhhHHHHHHHH
Confidence 11579999999999999999999999999999876689999999999988888777 888999999999999999
Q ss_pred HHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEc--CCcCCCCCcCeeEEEEeCC
Q 018437 229 TKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVS--GHKYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 229 ~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~--~hK~l~~P~g~g~l~~~~~ 293 (356)
+++ |+++|+|++|+.+.. .... .+...+ |.++.| +||+++++...|+++.+++
T Consensus 147 ~~~------~~~li~D~a~~~g~~--~~~~---~~~~~~-di~~~Sf~~~K~l~~~g~gg~~~~~~~ 201 (367)
T 3nyt_A 147 SKY------GIPVIEDAAQSFGAS--YKGK---RSCNLS-TVACTSFFPSAPLGCYGDGGAIFTNDD 201 (367)
T ss_dssp HHT------TCCBEEECTTTTTCE--ETTE---ETTSSS-SEEEEECCTTSSSCCSSCCEEEEESCH
T ss_pred HHc------CCEEEEECccccCCe--ECCe---eccCCC-CEEEEECCCCCcCCCcCceeEEEeCCH
Confidence 999 999999999975433 1111 111112 777777 6999865334677766543
No 97
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.84 E-value=6.4e-20 Score=177.63 Aligned_cols=238 Identities=10% Similarity=-0.057 Sum_probs=164.2
Q ss_pred ChHHHHHHHHHHhcccCCCc---ccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q 018437 68 MEPECDKLVMASINKNYVDM---DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~---~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (356)
+++.+.+++.+.+......+ ....+......++++++++++|.+. .+++++|++||..++.++..+
T Consensus 79 ~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g~~~-------~i~~~sGs~a~~~al~~l~~~---- 147 (427)
T 2w8t_A 79 FDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYGTTG-------AIVFSTGYMANLGIISTLAGK---- 147 (427)
T ss_dssp GCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHTCSE-------EEEESCHHHHHHHHHHHHSCT----
T ss_pred CCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhCCCc-------eEEecCcHHHHHHHHHHhcCC----
Confidence 45788888877765422111 1122334566778888999999863 677888899999888776432
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh----CceEEEEecCCCcccccCC
Q 018437 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NTICVAAILGSTLTGEFED 220 (356)
Q Consensus 145 ~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~----~~~~v~~~~~~~~tG~~~~ 220 (356)
++.|+++.++|.++...++..|++++.+|. +|+++|++++++ ++++|+++.++|++|.+.|
T Consensus 148 ---------gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~ 212 (427)
T 2w8t_A 148 ---------GEYVILDADSHASIYDGCQQGNAEIVRFRH------NSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAP 212 (427)
T ss_dssp ---------TCEEEEETTCCHHHHHHHHHSCSEEEEECT------TCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECC
T ss_pred ---------CCEEEECCcccHHHHHHHHHcCCeeEEeCC------CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC
Confidence 568999999999999999999998887762 589999999986 7899999999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCc---ccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCc
Q 018437 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE---WDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (356)
Q Consensus 221 i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~---~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~ 297 (356)
+++|.++|+++ |+++|+|++|+++..+. ..... +++ .+++|.+..++||+++ +.| |+++.++ +..
T Consensus 213 l~~l~~l~~~~------g~~li~Dea~~~~~~~~-~g~~~~~~~~~-~~~~di~~~s~sK~~g-~~g-G~v~~~~-~l~- 280 (427)
T 2w8t_A 213 LKEMVAVAKKH------GAMVLVDEAHSMGFFGP-NGRGVYEAQGL-EGQIDFVVGTFSKSVG-TVG-GFVVSNH-PKF- 280 (427)
T ss_dssp HHHHHHHHHHT------TCEEEEECTTTTTTSST-TSCCHHHHTTC-TTCCSEEEEESSSTTC-SCC-EEEEECC-TTG-
T ss_pred HHHHHHHHHHc------CCEEEEECCccccccCC-CCCchHhhcCC-CcCCcEEEecchhhhc-cCC-CEEEeCH-HHH-
Confidence 99999999999 99999999999866531 00100 122 2468999999999985 666 8888753 333
Q ss_pred cccccc-cCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCc
Q 018437 298 DELVFH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPF 353 (356)
Q Consensus 298 ~~~~~~-~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~ 353 (356)
+.+... ..|.. .++.+....+++.++++.+.. ++++.++..+++++
T Consensus 281 ~~l~~~~~~~~~--------~~~~~~~~~aa~~~al~~~~~--~~~~~~~~~~~~~~ 327 (427)
T 2w8t_A 281 EAVRLACRPYIF--------TASLPPSVVATATTSIRKLMT--AHEKRERLWSNARA 327 (427)
T ss_dssp GGGGGTCHHHHS--------SCCCCHHHHHHHHHHHHHHTS--CHHHHHHHHHHHHH
T ss_pred HHHHHhcccccc--------cCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHH
Confidence 222111 11111 134444445666677776542 23344444444433
No 98
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.84 E-value=2.9e-20 Score=178.71 Aligned_cols=212 Identities=12% Similarity=-0.036 Sum_probs=157.6
Q ss_pred cccccccCCC-ChHHHHHHHHHHhccc-CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHH
Q 018437 58 LNLASFVTTW-MEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (356)
Q Consensus 58 ~~l~~~~~~~-~~~~v~~~i~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (356)
++|..+.+.. +++.+.+++.+.+... ...|....+..++++++.+++++.+|++.+. ...+++|+|+++++..++.
T Consensus 50 idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~--~~~v~~t~G~~~al~~~~~ 127 (404)
T 2o1b_A 50 INMAVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDK--EDEVCILYGTKNGLVAVPT 127 (404)
T ss_dssp EECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCT--TTSEEEESSHHHHHHHHHH
T ss_pred EecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--cccEEEcCCcHHHHHHHHH
Confidence 3444444432 3578888888777532 2233334567889999888888888986310 1248999999999999998
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcc
Q 018437 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (356)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (356)
++.++ +++|+++.++|..+...++..|++++.+|++++++.+|+++|++++++++++|++++|+|||
T Consensus 128 ~l~~~-------------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~npt 194 (404)
T 2o1b_A 128 CVINP-------------GDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQIIDKTKLIYLTYPNNPT 194 (404)
T ss_dssp HHCCT-------------TCEEEEEESCCSSHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHHEEEEEECSSCTTT
T ss_pred HhcCC-------------CCEEEEcCCCchhHHHHHHHCCCEEEEeccCcccCcCCHHHHHHhhccCceEEEEcCCCCCC
Confidence 87432 47899999999999999999999999999976446799999999998888999999999999
Q ss_pred cccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCC-CCcCeeEEEE
Q 018437 216 GEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGL-VYAGVGWVVW 290 (356)
Q Consensus 216 G~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~-~P~g~g~l~~ 290 (356)
|.+.| +++|.++|+++ ++++++|++|+.+...- .+.....+. ..+.+.+..++||+++ ....+|+++.
T Consensus 195 G~~~~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~ 267 (404)
T 2o1b_A 195 GSTATKEVFDEAIAKFKGT------DTKIVHDFAYGAFGFDA-KNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVG 267 (404)
T ss_dssp CCCCCHHHHHHHHHHHTTS------SCEEEEECTTTTCBSSS-CCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEE
T ss_pred CccCCHHHHHHHHHHHHHc------CCEEEEEccchhcccCC-CCCChhhcCCCCCCEEEEEecchhccCchhheEeEec
Confidence 99965 78899999999 99999999998754310 000011111 1145778889999985 3346899876
Q ss_pred e
Q 018437 291 R 291 (356)
Q Consensus 291 ~ 291 (356)
+
T Consensus 268 ~ 268 (404)
T 2o1b_A 268 N 268 (404)
T ss_dssp C
T ss_pred C
Confidence 4
No 99
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.84 E-value=2.8e-20 Score=191.93 Aligned_cols=221 Identities=14% Similarity=-0.017 Sum_probs=162.5
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCe
Q 018437 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE 177 (356)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~ 177 (356)
.+.++.+++++|.+. ..++++|+++||..++.++..+ +++|+++.++|.++...+...|++
T Consensus 208 ~~~ee~la~l~G~d~------~i~~~~Gtt~a~~~~i~al~~~-------------GD~Vlv~~~~h~s~~~~~~~~G~~ 268 (755)
T 2vyc_A 208 GESEKYAARVFGADR------SWSVVVGTSGSNRTIMQACMTD-------------NDVVVVDRNCHKSIEQGLMLTGAK 268 (755)
T ss_dssp HHHHHHHHHHHTCSE------EEEESSHHHHHHHHHHHHHCCT-------------TCEEEEESSCCHHHHHHHHHHCCE
T ss_pred HHHHHHHHHHhCCCc------eEEECCcHHHHHHHHHHHhcCC-------------CCEEEECCCchHHHHHHHHHcCCE
Confidence 466778999999874 3567888889999999887543 579999999999999999999999
Q ss_pred eEEEEecCCc----ccc-----CHHHHHHHHhh--Cce--------EEEEecCCCcccccCCHHHHHHHHHHhhhccCCC
Q 018437 178 LKEVKLEEGY----YVM-----NPVKAVELVDE--NTI--------CVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWD 238 (356)
Q Consensus 178 v~~v~~~~~~----~~~-----d~~~L~~~i~~--~~~--------~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~ 238 (356)
+++++.+.++ +.+ |+++|++++++ +++ +++++++ |++|.+.|+++|+++|+++ +
T Consensus 269 ~v~v~~~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~------~ 341 (755)
T 2vyc_A 269 PVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKT------S 341 (755)
T ss_dssp EEEECCCBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTT------C
T ss_pred EEEEeCCCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHc------C
Confidence 9999986432 245 99999999975 343 8888888 6899999999999999999 9
Q ss_pred CcEEEecccccccccccCCCC-cccccCCC--ceE------EEEcCCcCCCCCcCeeEEEEeCC--CCCccccccccCCC
Q 018437 239 TPIHVDAASGGFIAPFLYPDL-EWDFRLPL--VKS------INVSGHKYGLVYAGVGWVVWRTK--DDLPDELVFHINYL 307 (356)
Q Consensus 239 ~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~--~Ds------~~~~~hK~l~~P~g~g~l~~~~~--~~~~~~~~~~~~~~ 307 (356)
+++|+|+||+++.. | .+.. ... ...+ +|. ++.|+||++.+|.++|+++++++ ......+.......
T Consensus 342 ~~livDeA~~~~~~-~-~~~~~~~~-~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~~~~~~ 418 (755)
T 2vyc_A 342 DRLHFDEAWYGYAR-F-NPIYADHY-AMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMH 418 (755)
T ss_dssp SEEEEECTTCTTGG-G-CGGGTTSS-SSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHHHHHHHHHHT
T ss_pred CEEEEECcCchhcc-c-CcccCCcc-hhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHHHHHHHHHHh
Confidence 99999999986432 1 1110 000 0134 676 89999999999999999999865 11111110001111
Q ss_pred CCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCccc
Q 018437 308 GSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFLV 355 (356)
Q Consensus 308 ~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l~ 355 (356)
..+|.+...++++.++++.+..+|.++++++..+++++++
T Consensus 419 --------~s~sp~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r 458 (755)
T 2vyc_A 419 --------ATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFR 458 (755)
T ss_dssp --------SCSSCCHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHH
T ss_pred --------CCCCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 1246666667888888888877766778888877776653
No 100
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.84 E-value=2.9e-20 Score=179.19 Aligned_cols=212 Identities=13% Similarity=0.065 Sum_probs=162.6
Q ss_pred CcccccccCCC-ChHHHHHHHHHHhcccC--CCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHH
Q 018437 57 RLNLASFVTTW-MEPECDKLVMASINKNY--VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (356)
Q Consensus 57 ~~~l~~~~~~~-~~~~v~~~i~~~~~~~~--~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~a 133 (356)
.++|+.+.+.. +++.+.+++.+.+.... ..|....+..++++++.+++.+.+|.+.+. ...+++|+||++++..+
T Consensus 30 ~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~--~~~i~~~~g~~~a~~~~ 107 (422)
T 3fvs_A 30 VVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDP--LRNVLVTVGGYGALFTA 107 (422)
T ss_dssp CEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCH--HHHEEEESHHHHHHHHH
T ss_pred ceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCC--CCcEEEECChHHHHHHH
Confidence 34555555543 45788888888776432 344444567889999999999999976421 02489999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-----------CccccCHHHHHHHHhhC
Q 018437 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-----------GYYVMNPVKAVELVDEN 202 (356)
Q Consensus 134 l~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-----------~~~~~d~~~L~~~i~~~ 202 (356)
+.++..+ +++|+++.++|..+...++..|++++.+|++. +++.+|+++|+++++++
T Consensus 108 ~~~~~~~-------------gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~ 174 (422)
T 3fvs_A 108 FQALVDE-------------GDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSR 174 (422)
T ss_dssp HHHHCCT-------------TCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTT
T ss_pred HHHHcCC-------------CCEEEEcCCCchhhHHHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCCC
Confidence 9887432 56899999999999999999999999999875 24689999999999989
Q ss_pred ceEEEEecCCCcccccC---CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc----CCCceEEEEcC
Q 018437 203 TICVAAILGSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR----LPLVKSINVSG 275 (356)
Q Consensus 203 ~~~v~~~~~~~~tG~~~---~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~----~~~~Ds~~~~~ 275 (356)
+++|++++|+||||.+. ++++|.++|+++ |+++|+|++|+.+... +.....+. ..+.+.+..++
T Consensus 175 ~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~S~ 245 (422)
T 3fvs_A 175 TKALVLNTPNNPLGKVFSREELELVASLCQQH------DVVCITDEVYQWMVYD---GHQHISIASLPGMWERTLTIGSA 245 (422)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEECTTTTCBCT---TCCCCCGGGSTTTGGGEEEEEEH
T ss_pred ceEEEECCCCCCCCcCCCHHHHHHHHHHHHHc------CcEEEEEccchhhccC---CCCCCChhhcccccCcEEEEecc
Confidence 99999999999999997 589999999999 9999999999875542 11111111 12445677789
Q ss_pred CcCCC-CCcCeeEEEEeC
Q 018437 276 HKYGL-VYAGVGWVVWRT 292 (356)
Q Consensus 276 hK~l~-~P~g~g~l~~~~ 292 (356)
+|.++ ...++|+++.++
T Consensus 246 sK~~g~~G~r~G~~~~~~ 263 (422)
T 3fvs_A 246 GKTFSATGWKVGWVLGPD 263 (422)
T ss_dssp HHHHTCGGGCCEEEECCH
T ss_pred hhccCCccceEEEEEeCH
Confidence 99975 346789987643
No 101
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.84 E-value=4.2e-20 Score=177.24 Aligned_cols=211 Identities=10% Similarity=0.049 Sum_probs=161.5
Q ss_pred cccccccCCC-ChHHHHHHHHHHhccc-CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHH
Q 018437 58 LNLASFVTTW-MEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (356)
Q Consensus 58 ~~l~~~~~~~-~~~~v~~~i~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (356)
++|+.+.+.. +++.+.+++.+.+... ...|....+..++++++.+++.+.+|.+.+. ...+++|+||++++..++.
T Consensus 26 i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~--~~~i~~~~g~~~a~~~~~~ 103 (410)
T 3e2y_A 26 VNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDP--NEEILVAVGAYGSLFNSIQ 103 (410)
T ss_dssp EECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCT--TTSEEEESHHHHHHHHHHH
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCC--CCCEEEeCCcHHHHHHHHH
Confidence 4565555553 4578899888877643 2234444467889999999999988876421 1358999999999999998
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC----------CccccCHHHHHHHHhhCceE
Q 018437 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE----------GYYVMNPVKAVELVDENTIC 205 (356)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~----------~~~~~d~~~L~~~i~~~~~~ 205 (356)
++.++ +++|+++.++|..+...++..|++++.+|++. .++.+|+++|++++++++++
T Consensus 104 ~~~~~-------------gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~ 170 (410)
T 3e2y_A 104 GLVDP-------------GDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKA 170 (410)
T ss_dssp HHCCT-------------TCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEE
T ss_pred HhcCC-------------CCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCCCceE
Confidence 87432 57899999999999999999999999999862 24789999999999888999
Q ss_pred EEEecCCCccccc---CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc----CCCceEEEEcCCcC
Q 018437 206 VAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR----LPLVKSINVSGHKY 278 (356)
Q Consensus 206 v~~~~~~~~tG~~---~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~----~~~~Ds~~~~~hK~ 278 (356)
|++++|+||||.+ +++++|.++|+++ ++++|+|++|+++... +.....+. ....+.+..+++|.
T Consensus 171 v~~~~p~nptG~~~~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~S~sK~ 241 (410)
T 3e2y_A 171 IILNTPHNPLGKVYTRQELQVIADLCVKH------DTLCISDEVYEWLVYT---GHTHVKIATLPGMWERTITIGSAGKT 241 (410)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEECTTTTCBCT---TCCCCCGGGSTTCGGGEEEEEEHHHH
T ss_pred EEEeCCCCCCCcCcCHHHHHHHHHHHHHc------CcEEEEEhhhhhcccC---CCCCCCHHHcCCccCeEEEEecchhh
Confidence 9999999999999 6799999999999 9999999999875541 11111111 12345667788998
Q ss_pred CC-CCcCeeEEEEeC
Q 018437 279 GL-VYAGVGWVVWRT 292 (356)
Q Consensus 279 l~-~P~g~g~l~~~~ 292 (356)
++ ...++|+++.++
T Consensus 242 ~g~~G~r~G~~~~~~ 256 (410)
T 3e2y_A 242 FSVTGWKLGWSIGPA 256 (410)
T ss_dssp SSCGGGCCEEEECCH
T ss_pred cCCCCceEEEEEECH
Confidence 75 456789887643
No 102
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.84 E-value=2e-19 Score=172.47 Aligned_cols=208 Identities=13% Similarity=0.030 Sum_probs=155.3
Q ss_pred CCcccccccCC---CChHHHHHHHHHHhccc---CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHH
Q 018437 56 PRLNLASFVTT---WMEPECDKLVMASINKN---YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEA 129 (356)
Q Consensus 56 ~~~~l~~~~~~---~~~~~v~~~i~~~~~~~---~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a 129 (356)
..++|..+.+. .+++.+.+++.+.+... .. |....+..++++++.+++.+.+|++.+. ..+++|+||++|
T Consensus 35 ~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~---~~v~~t~g~t~a 110 (407)
T 2zc0_A 35 KLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELAAFLKKYDHLEVSP---ENIVITIGGTGA 110 (407)
T ss_dssp CCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCG---GGEEEESHHHHH
T ss_pred ceEeCCCCCCCchhCCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCc---ceEEEecCHHHH
Confidence 33445444433 24578888887776542 22 4444567889999888888888964321 358999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHh----h--Cc
Q 018437 130 IMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----E--NT 203 (356)
Q Consensus 130 ~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~----~--~~ 203 (356)
+..++.++.++ +++|+++.++|..+...++..|++++.+|++++ + +|+++|+++++ + ++
T Consensus 111 ~~~~~~~~~~~-------------gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~-~d~~~l~~~l~~~~~~~~~~ 175 (407)
T 2zc0_A 111 LDLLGRVLIDP-------------GDVVITENPSYINTLLAFEQLGAKIEGVPVDND-G-MRVDLLEEKIKELKAKGQKV 175 (407)
T ss_dssp HHHHHHHHCCT-------------TCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT-E-ECHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHhcCC-------------CCEEEEeCCChHHHHHHHHHcCCEEEEcccCCC-C-CCHHHHHHHHHhhhcccCCc
Confidence 99999887532 478999999999999999999999999999864 4 99999999998 6 67
Q ss_pred eEE-EEecCCCcccccCCHH---HHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcc---cccCCCceEEEEcCC
Q 018437 204 ICV-AAILGSTLTGEFEDVK---LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW---DFRLPLVKSINVSGH 276 (356)
Q Consensus 204 ~~v-~~~~~~~~tG~~~~i~---~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~---~~~~~~~Ds~~~~~h 276 (356)
++| ++++++||||.+.|++ +|.++|+++ ++++|+|++|+++... ..... .+...+.+.+..+++
T Consensus 176 ~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~---~~~~~~~~~~~~~~~~i~~~s~s 246 (407)
T 2zc0_A 176 KLIYTIPTGQNPMGVTMSMERRKALLEIASKY------DLLIIEDTAYNFMRYE---GGDIVPLKALDNEGRVIVAGTLS 246 (407)
T ss_dssp EEEEECCSSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEECTTTTSBSS---CSSCCCGGGGCSSCCEEEEEEST
T ss_pred eEEEECCCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEECCCcccccC---CCCCCChhhcCCCCCEEEEcccc
Confidence 776 5788999999998886 999999999 9999999999876441 11111 121123445667789
Q ss_pred cCCCCCcCeeEEEEe
Q 018437 277 KYGLVYAGVGWVVWR 291 (356)
Q Consensus 277 K~l~~P~g~g~l~~~ 291 (356)
|+++....+|+++.+
T Consensus 247 K~~~~G~r~G~~~~~ 261 (407)
T 2zc0_A 247 KVLGTGFRIGWIIAE 261 (407)
T ss_dssp TTTCTTSCCEEEECC
T ss_pred cccCCCcceEEEecC
Confidence 998733458999875
No 103
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.83 E-value=4.5e-20 Score=177.32 Aligned_cols=246 Identities=12% Similarity=-0.002 Sum_probs=158.5
Q ss_pred CChHHHHHHHHHHhcccC--C-----CcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNY--V-----DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~--~-----~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~ 139 (356)
+.++.+.+++.+.+.... + .+...+....+++.+++++++++|++. ..+++++ ||+|+..++.++.+
T Consensus 36 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~-----~~i~~~s-Gt~a~~~~~~~~~~ 109 (417)
T 3n0l_A 36 FTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKF-----ANVQPNS-GSQANQGVYAALIN 109 (417)
T ss_dssp CCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSE-----EECCCSS-HHHHHHHHHHHHSC
T ss_pred CCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhCCCC-----cceEecc-HHHHHHHHHHHhcC
Confidence 346788888877763221 1 112224557888889999999999975 1244444 58999999888754
Q ss_pred HHHHHHHhcCCCCCCCeEEecCCCcchHHH---HHHhhCCe--eEEEEecCCccccCHHHHHHHHh-hCceEEEEecCCC
Q 018437 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEK---FARYFEVE--LKEVKLEEGYYVMNPVKAVELVD-ENTICVAAILGST 213 (356)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~---~~~~~G~~--v~~v~~~~~~~~~d~~~L~~~i~-~~~~~v~~~~~~~ 213 (356)
+ +++|+++.++|.++.. .+...|.. ++.+++++ ++.+|+++|+++++ +++++|++++++|
T Consensus 110 ~-------------gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~v~~~~~~~ 175 (417)
T 3n0l_A 110 P-------------GDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVEL-DGRIDYEKVREIAKKEKPKLIVCGASAY 175 (417)
T ss_dssp T-------------TCEEEEECC----------------CCSEEEEECCCT-TSSCCHHHHHHHHHHHCCSEEEECCSSC
T ss_pred C-------------CCEEEecccccccccchhhhhhhhcceeeeEeccCCC-CCCcCHHHHHHHHHhcCCeEEEECCccc
Confidence 2 5799999999987654 33444444 55566663 58999999999998 6899998888775
Q ss_pred cccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCC
Q 018437 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 214 ~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~ 293 (356)
|.+.|+++|.++|+++ |+++|+|+++..+.. ........ ...+|.++.++||++.+|.| |+++.+++
T Consensus 176 --G~~~~l~~i~~l~~~~------~~~li~Dea~~~g~~--~~~~~~~~--~~~~di~~~s~sK~l~g~~~-G~~~~~~~ 242 (417)
T 3n0l_A 176 --ARVIDFAKFREIADEI------GAYLFADIAHIAGLV--VAGEHPSP--FPYAHVVSSTTHKTLRGPRG-GIIMTNDE 242 (417)
T ss_dssp --CSCCCHHHHHHHHHHH------TCEEEEECTTTHHHH--HTTSSCCC--TTTCSEEEEESSTTTCSCSC-EEEEESCH
T ss_pred --CccCCHHHHHHHHHHc------CCEEEEECccchhhh--hcccCCCc--cccceEEEeeCccccCCCCe-eEEEECCH
Confidence 8999999999999999 999999999754333 11111112 23579999999999877775 88887643
Q ss_pred CCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
+.. +.+.. ..+.+ ..++.+....+++.+++.....++++++.++..+++++|
T Consensus 243 ~~~-~~~~~-~~~~~-------~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l 294 (417)
T 3n0l_A 243 ELA-KKINS-AIFPG-------IQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVL 294 (417)
T ss_dssp HHH-HHHHH-HHTTT-------TCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHH
T ss_pred HHH-HHHhh-hhCCc-------ccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 222 11110 00111 113444555666677777766667777777766665554
No 104
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.83 E-value=6.6e-20 Score=174.46 Aligned_cols=189 Identities=11% Similarity=-0.032 Sum_probs=139.3
Q ss_pred ChHHHHHHHHHHhcccCC-C-cccCc-chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q 018437 68 MEPECDKLVMASINKNYV-D-MDEYP-VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~-~-~~~~~-~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (356)
+++.+.+++.+.+..... . ...++ +......++++.+++++|++. .+++++|++++..++.++.++
T Consensus 54 ~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~-------~i~~~sGt~a~~~~~~~~~~~---- 122 (384)
T 1bs0_A 54 HHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYSR-------ALLFISGFAANQAVIAAMMAK---- 122 (384)
T ss_dssp GCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCSE-------EEEESCHHHHHHHHHHHHCCT----
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCCc-------EEEeCCcHHHHHHHHHHhCCC----
Confidence 457888888777654211 1 11111 223455677788999999853 566777799999988876432
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhC---ceEEEEecCCCcccccCCH
Q 018437 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN---TICVAAILGSTLTGEFEDV 221 (356)
Q Consensus 145 ~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~---~~~v~~~~~~~~tG~~~~i 221 (356)
++.|+++.++|.++..+++..|++++.+|. +|+++|++++++. +++|++++++||||.+.|+
T Consensus 123 ---------gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~------~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~l 187 (384)
T 1bs0_A 123 ---------EDRIAADRLSHASLLEAASLSPSQLRRFAH------NDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPL 187 (384)
T ss_dssp ---------TCEEEEETTCCHHHHHHHHTSSSEEEEECT------TCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCH
T ss_pred ---------CcEEEEcccccHHHHHHHHHcCCCEEEeCC------CCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccCH
Confidence 568999999999999999999999988873 4789999999763 7888899999999999999
Q ss_pred HHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 222 ~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
++|.++|+++ ++++|+|++|+.+..+.........+ ..+.|.++.++||+++ |.| |+++.+
T Consensus 188 ~~i~~l~~~~------~~~li~De~~~~~~~~~~~~~~~~~~-~~~~di~~~s~sK~~~-~~G-G~~~~~ 248 (384)
T 1bs0_A 188 AEIQQVTQQH------NGWLMVDDAHGTGVIGEQGRGSCWLQ-KVKPELLVVTFGKGFG-VSG-AAVLCS 248 (384)
T ss_dssp HHHHHHHHHT------TCEEEEECTTTTTTSSGGGCCHHHHT-TCCCSEEEEESSSTTS-SCC-EEEEEC
T ss_pred HHHHHHHHHc------CcEEEEECCcccceecCCCCchHHhc-CCCCcEEEeeccchhh-ccC-cEEEeC
Confidence 9999999999 99999999997654310000000111 1357888889999985 777 888875
No 105
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.83 E-value=2.8e-20 Score=178.14 Aligned_cols=272 Identities=14% Similarity=0.024 Sum_probs=174.5
Q ss_pred HHHHHHHHHHhhhcCCCCcccccccCCCChHHHHHHHHHHhccc-CCCcc------cCcchHHHHHHHHHHHHHHhCCCC
Q 018437 40 EAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKN-YVDMD------EYPVTTELQNRCVNMIAHLFNTPV 112 (356)
Q Consensus 40 ~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~i~~~~~~~-~~~~~------~~~~~~~le~~~~~~la~l~g~~~ 112 (356)
.++.+.+.+...... ..+++....+.. ++.+.+++.+.+... ...+. ..+....+|+.+++++++++|++.
T Consensus 9 ~~i~~~~~~~~~~~~-~~i~~~~~~~~~-~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~~ 86 (407)
T 2dkj_A 9 EALFELIALEEKRQR-EGLELIASENFV-SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAW 86 (407)
T ss_dssp HHHHHHHHHHHHHHH-TSEECCTTCCCC-CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHHHhh-cceeeccCCCCC-CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCCc
Confidence 345555554443221 222333333322 678889888777531 11111 112223566667789999999874
Q ss_pred CCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchH---HHHHHhhCCeeEEEEe--cCCc
Q 018437 113 ADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCW---EKFARYFEVELKEVKL--EEGY 187 (356)
Q Consensus 113 ~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~---~~~~~~~G~~v~~v~~--~~~~ 187 (356)
..+++++|++|+..++.++..+ +++|+++.++|.++ ..+++..|..++.+++ ++++
T Consensus 87 ------~~i~~~sGt~a~~~~~~~~~~~-------------gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 147 (407)
T 2dkj_A 87 ------ANVQPHSGSQANMAVYMALMEP-------------GDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDT 147 (407)
T ss_dssp ------EECCCSSHHHHHHHHHHHHCCT-------------TCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTT
T ss_pred ------ceEEecchHHHHHHHHHHhcCC-------------CCEEEEecccccCccchHHHHHhcCceEEEEecCCCccc
Confidence 1244555678999998887432 46899999999887 4556666775555555 4335
Q ss_pred cccCHHHHHHHHhh-CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCC
Q 018437 188 YVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLP 266 (356)
Q Consensus 188 ~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 266 (356)
+.+|+++|++++++ ++++|+++.|+|+ .+.|+++|.++|+++ |+++|+|++|+.+..+ .+..... ..
T Consensus 148 ~~~d~~~l~~~l~~~~~~~v~~~~p~~~--~~~~l~~i~~l~~~~------~~~li~Dea~~~g~~~--~~~~~~~--~~ 215 (407)
T 2dkj_A 148 ELIDLEEVRRLALEHRPKVIVAGASAYP--RFWDFKAFREIADEV------GAYLVVDMAHFAGLVA--AGLHPNP--LP 215 (407)
T ss_dssp SSCCHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHH------TCEEEEECTTTHHHHH--TTCSCCC--TT
T ss_pred CccCHHHHHHHHhhcCCeEEEEeccccC--CCCCHHHHHHHHHHc------CCEEEEEccccccccc--cCccCCc--cc
Confidence 89999999999985 8899988888886 778999999999999 9999999999874432 1111111 12
Q ss_pred CceEEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHH
Q 018437 267 LVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFIS 346 (356)
Q Consensus 267 ~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~ 346 (356)
..|.++.++||++.+|.+ |+++.++++.. +.+..... . + ..++.+....+++.+++..+..++++++.++
T Consensus 216 ~~di~~~s~sK~l~g~~~-G~~~~~~~~~~-~~l~~~~~-~-~------~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~ 285 (407)
T 2dkj_A 216 YAHVVTSTTHKTLRGPRG-GLILSNDPELG-KRIDKLIF-P-G------IQGGPLEHVIAGKAVAFFEALQPEFKEYSRL 285 (407)
T ss_dssp TCSEEEEESSGGGCCCSC-EEEEESCHHHH-HHHHHHHT-T-T------TCSSCCHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred cccEEEEeccccCCCCCc-eEEEECCHHHH-HHHHhhhc-c-c------ccCCCcHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 479999999999888887 99988643332 11111000 0 0 0133334334466677776545677777777
Q ss_pred HHhccCcc
Q 018437 347 SLKVCPFL 354 (356)
Q Consensus 347 ~~~~a~~l 354 (356)
..+++++|
T Consensus 286 ~~~~~~~l 293 (407)
T 2dkj_A 286 VVENAKRL 293 (407)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77776655
No 106
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.83 E-value=1.9e-19 Score=170.24 Aligned_cols=249 Identities=13% Similarity=0.070 Sum_probs=166.5
Q ss_pred ccccccCC-CChHHHHHHHHHHhcc-cCCCcccCcchHHHHHHHHHHHHHHhCC-CCCCCCCCCeEEeCChhHHHHHHHH
Q 018437 59 NLASFVTT-WMEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNT-PVADDKTAVGVGTVGSSEAIMLAGL 135 (356)
Q Consensus 59 ~l~~~~~~-~~~~~v~~~i~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~-~~~~~~~~~~~~t~Ggt~a~~~al~ 135 (356)
+|....+. ++++.+.+++.+.+.. ....|.. ++.. ++++++++++|+ ++ ..+++|+||++++..++.
T Consensus 34 ~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~----~l~~~la~~~g~~~~-----~~i~~~~g~t~a~~~~~~ 103 (367)
T 3euc_A 34 KLDAMENPYRLPPALRSELAARLGEVALNRYPV-PSSE----ALRAKLKEVMQVPAG-----MEVLLGNGSDEIISMLAL 103 (367)
T ss_dssp ECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCC-CCHH----HHHHHHHHHHTCCTT-----CEEEEEEHHHHHHHHHHH
T ss_pred EccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-CcHH----HHHHHHHHHhCCCCc-----ceEEEcCCHHHHHHHHHH
Confidence 44444433 3457888888877653 2222222 3333 555668888898 33 348999999999999988
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh-CceEEEEecCCCc
Q 018437 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTL 214 (356)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~ 214 (356)
++.++ +++|+++.++|..+...++..|++++.+|+++ ++.+|+++|++++++ ++++|++++++||
T Consensus 104 ~~~~~-------------gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~~v~~~~~~np 169 (367)
T 3euc_A 104 AAARP-------------GAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRA-DFTLDRGAMLAAMAEHQPAIVYLAYPNNP 169 (367)
T ss_dssp HTCCT-------------TCEEEEEESCSCCSCHHHHTTTCEEEEEECCT-TSCCCHHHHHHHHHHHCCSEEEEESSCTT
T ss_pred HHcCC-------------CCEEEEcCCCHHHHHHHHHHcCCeEEEecCCC-CCCCCHHHHHHHhhccCCCEEEEcCCCCC
Confidence 76432 57899999999999999999999999999987 489999999999998 8999999999999
Q ss_pred ccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 215 TGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 215 tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
||.+.+ +++|.++|++++. |+++|+|++|+.+.. ......+...+.+.+..+++|++..+.++|+++..
T Consensus 170 tG~~~~~~~l~~i~~~~~~~~~----~~~li~De~~~~~~~----~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~ 241 (367)
T 3euc_A 170 TGNLFDAADMEAIVRAAQGSVC----RSLVVVDEAYQPFAQ----ESWMSRLTDFGNLLVMRTVSKLGLAGIRLGYVAGD 241 (367)
T ss_dssp TCCCCCHHHHHHHHHHTBTTSC----BCEEEEECTTCCSSS----CCSGGGGGTCTTEEEEEECCCTTSCSCCEEEEEEC
T ss_pred CCCCCCHHHHHHHHHhhhhcCC----CcEEEEeCcchhhcc----cchHHHHhhCCCEEEEecchhhcccccCceeeeeC
Confidence 999965 5555555655511 489999999986432 11111222335567778899996556778998874
Q ss_pred CCCCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 292 TKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
+ +.. +.+... .. . ++.+.....++..+|+. .+.+++..++..+++++|
T Consensus 242 ~-~~~-~~~~~~----~~---~----~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l 289 (367)
T 3euc_A 242 P-QWL-EQLDKV----RP---P----YNVNVLTEATALFALEH--VAVLDEQAAQLRAERSRV 289 (367)
T ss_dssp H-HHH-HHHGGG----CC---S----SCCCHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHH
T ss_pred H-HHH-HHHHHh----CC---C----CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHH
Confidence 2 222 111110 00 1 12233334444455544 445666666666555544
No 107
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.83 E-value=2.8e-19 Score=169.56 Aligned_cols=212 Identities=13% Similarity=0.008 Sum_probs=156.4
Q ss_pred CCcccccccCCC-ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHH
Q 018437 56 PRLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (356)
Q Consensus 56 ~~~~l~~~~~~~-~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (356)
..++|....+.. +++.+.+++.+.+. ....|....+..++++++.+++++.+|++.+ ...+++|+||++++..++
T Consensus 24 ~~i~l~~~~~~~~~~~~v~~a~~~~~~-~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~---~~~i~~t~g~~~al~~~~ 99 (376)
T 3ezs_A 24 RGLDLGIGEPQFETPKFIQDALKNHTH-SLNIYPKSAFEESLRAAQRGFFKRRFKIELK---ENELISTLGSREVLFNFP 99 (376)
T ss_dssp CCCBCSSCCCCSCCCHHHHHHHHTTGG-GGGSCCCTTCCHHHHHHHHHHHHHHHSCCCC---GGGEEEESSSHHHHHHHH
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHhhh-hcCCCCCCCCCHHHHHHHHHHHHHHhCCCCC---HHHEEECcCcHHHHHHHH
Confidence 334565555443 45788888887763 3333444456788999999999999998431 145899999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCc
Q 018437 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (356)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (356)
.++..+ ..+++|+++.++|..+...++..|++++.+|++++ ..+++ +|++++.+++++|++++|+||
T Consensus 100 ~~~~~~-----------~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~-~l~~~~~~~~~~v~~~~p~np 166 (376)
T 3ezs_A 100 SFVLFD-----------YQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKE-NDFTP-SLNEKELQEVDLVILNSPNNP 166 (376)
T ss_dssp HHHTTT-----------CSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGG-GTSCC-CCCHHHHHHCSEEEECSSCTT
T ss_pred HHHcCC-----------CCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCC-CCcch-hHHhhhccCCCEEEEcCCCCC
Confidence 887431 01468999999999999999999999999999764 34555 777778778899999999999
Q ss_pred ccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc------CCCceEEEEcCCcCCC-CCcC
Q 018437 215 TGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR------LPLVKSINVSGHKYGL-VYAG 284 (356)
Q Consensus 215 tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~------~~~~Ds~~~~~hK~l~-~P~g 284 (356)
||.+.| +++|.++|+++ ++++|+|++|+.+...- .+....... ..+.+.+..+++|+++ .+.+
T Consensus 167 tG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r 239 (376)
T 3ezs_A 167 TGRTLSLEELISWVKLALKH------DFILINDECYSEIYENT-PPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLR 239 (376)
T ss_dssp TCCCCCHHHHHHHHHHHHHH------TCEEEEECTTTTCBSSS-CCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGC
T ss_pred cCCCCCHHHHHHHHHHHHHc------CcEEEEEccchhhccCC-CCCCHHHccccccccccCcEEEEecchhccCCccce
Confidence 999966 67778889999 99999999998755421 000001110 2456788889999984 5567
Q ss_pred eeEEEEe
Q 018437 285 VGWVVWR 291 (356)
Q Consensus 285 ~g~l~~~ 291 (356)
+|+++..
T Consensus 240 ~G~~~~~ 246 (376)
T 3ezs_A 240 SGFIAGD 246 (376)
T ss_dssp CEEEEEC
T ss_pred eEEEeeC
Confidence 8988763
No 108
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.83 E-value=4.6e-20 Score=176.56 Aligned_cols=244 Identities=9% Similarity=-0.012 Sum_probs=164.6
Q ss_pred ChHHHHHHHHHHhcccC-C-C-----cccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHH
Q 018437 68 MEPECDKLVMASINKNY-V-D-----MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~-~-~-----~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~ 140 (356)
.++.+.+++.+.+.... . + +...+...++++++++++++++|.+. ..+++++|++|+..++.++..+
T Consensus 35 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~~------~~i~~~sGt~a~~~a~~~~~~~ 108 (405)
T 2vi8_A 35 VSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEH------ANVQPHSGAQANMAVYFTVLEH 108 (405)
T ss_dssp CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSE------EECCCSSHHHHHHHHHHHHCCT
T ss_pred CCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCc------eEEEecCcHHHHHHHHHHhcCC
Confidence 36788999887774221 1 1 11224567788889999999999874 1344455599999999887432
Q ss_pred HHHHHHhcCCCCCCCeEEecCCCcchHHH-H--HHhhCC--eeEEEEecCCccccCHHHHHHHHhh-CceEEEEecCCCc
Q 018437 141 WQQKRKEQGKPYDKPNIVTGANVQVCWEK-F--ARYFEV--ELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTL 214 (356)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~s~~~h~s~~~-~--~~~~G~--~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~ 214 (356)
+++|+++.++|.++.. . +...|. .++.++++++++.+|+++|++++++ ++++|++ .+++.
T Consensus 109 -------------gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~-~~~~~ 174 (405)
T 2vi8_A 109 -------------GDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVA-AAAAY 174 (405)
T ss_dssp -------------TCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSC
T ss_pred -------------CCEEEEecccccchhcccchhhhccceeEEEecccccccCCcCHHHHHHHHHhcCCeEEEE-eCCCC
Confidence 5789999999987643 1 123444 6777777644589999999999986 8888776 44443
Q ss_pred ccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCC
Q 018437 215 TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (356)
Q Consensus 215 tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~ 294 (356)
|...|+++|.++|+++ |+++|+|++|+.+..+. +..... ...+|.++.++||++++|.| |+++.++ +
T Consensus 175 -~~~~~l~~i~~l~~~~------~~~li~Dea~~~g~~~~--~~~~~~--~~~~di~~~s~sK~~~g~~g-G~~~~~~-~ 241 (405)
T 2vi8_A 175 -PRIIDFAKFREIADEV------GAYLMVDMAHIAGLVAA--GLHPNP--VPYAHFVTTTTHKTLRGPRG-GMILCQE-Q 241 (405)
T ss_dssp -CSCCCHHHHHHHHHHH------TCEEEEECTTTHHHHHT--TSSCCS--TTTCSEEEEESSSTTCCCSC-EEEEECH-H
T ss_pred -CccCCHHHHHHHHHHc------CCEEEEEcccccccccc--CcCCCc--cccCCEEEEeccccCCCCCC-eEEEEcH-H
Confidence 6777999999999999 99999999998544321 111111 23678889999999988888 9998753 2
Q ss_pred CCccccccc-cCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 295 DLPDELVFH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 295 ~~~~~~~~~-~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
.. +.+... ..+ ..++.+....+++.++++.+..++++++.++..+++++|
T Consensus 242 ~~-~~l~~~~~~~---------~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l 292 (405)
T 2vi8_A 242 FA-KQIDKAIFPG---------IQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRL 292 (405)
T ss_dssp HH-HHHHHHHTTT---------TCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred HH-HHHHhhhccc---------ccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 22 221110 011 113444444566667777655567777777777776665
No 109
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.82 E-value=3.7e-19 Score=172.00 Aligned_cols=191 Identities=14% Similarity=0.051 Sum_probs=141.5
Q ss_pred cccccCCCC-hHHHHHHHHHHhcccCCCccc-CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHH
Q 018437 60 LASFVTTWM-EPECDKLVMASINKNYVDMDE-YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF 137 (356)
Q Consensus 60 l~~~~~~~~-~~~v~~~i~~~~~~~~~~~~~-~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~ 137 (356)
|..+.+..+ ++.+.+++.+.+..+. |.. .++.. ++++.+++++|.+. +++|+||++|+..++.++
T Consensus 21 l~~~~p~~~~p~~~~~a~~~~~~~~~--y~~~~~~~~----~l~~~la~~~~~~~-------v~~~~ggt~al~~~l~~l 87 (424)
T 2po3_A 21 LLVGRPNRIDRARLYERLDRALDSQW--LSNGGPLVR----EFEERVAGLAGVRH-------AVATCNATAGLQLLAHAA 87 (424)
T ss_dssp EETTCCCCCCHHHHHHHHHHHHHHTC--CSSSCHHHH----HHHHHHHHHHTSSE-------EEEESCHHHHHHHHHHHH
T ss_pred ccccCCCCCChHHHHHHHHHHHhcCC--cccCCHHHH----HHHHHHHHHhCCCe-------EEEeCCHHHHHHHHHHHc
Confidence 334444433 4578888887776432 322 34444 45555888888753 899999999999999876
Q ss_pred HHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccc
Q 018437 138 KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (356)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~ 217 (356)
. + +++|+++.++|.++..+++..|++++.++++++++.+|+++|++++++++++|+++ +++|.
T Consensus 88 ~-~-------------gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~---~~tG~ 150 (424)
T 2po3_A 88 G-L-------------TGEVIMPSMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVTPRTSAVVGV---HLWGR 150 (424)
T ss_dssp T-C-------------CSEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTSSBCHHHHGGGCCTTEEEEEEE---CGGGC
T ss_pred C-C-------------CCEEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhhCcCCcEEEEE---CCCCC
Confidence 3 1 47899999999999999999999999999986458999999999998888888875 38999
Q ss_pred cCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCC--cCCCCCcCeeEEEEeCC
Q 018437 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGH--KYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 218 ~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~h--K~l~~P~g~g~l~~~~~ 293 (356)
+.++++|.++|+++ ++++|+|++|+.+.. + .. . .+. ...|.++.|+| |++.+ ...|+++.+++
T Consensus 151 ~~~l~~i~~la~~~------~~~li~Dea~~~g~~-~-~~-~--~~~-~~~di~~~S~sk~K~l~~-~~~G~~v~~~~ 215 (424)
T 2po3_A 151 PCAADQLRKVADEH------GLRLYFDAAHALGCA-V-DG-R--PAG-SLGDAEVFSFHATKAVNA-FEGGAVVTDDA 215 (424)
T ss_dssp CCCHHHHHHHHHHT------TCEEEEECTTCTTCE-E-TT-E--ETT-SSSSEEEEECCTTSSSCC-SSCEEEEESCH
T ss_pred cCCHHHHHHHHHHc------CCEEEEECccccCCe-E-CC-e--ecc-cccCEEEEeCCCCCCccC-CCCeEEEeCCH
Confidence 99999999999999 999999999984322 1 11 1 111 11356666655 87754 66788877533
No 110
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.82 E-value=1.4e-19 Score=173.28 Aligned_cols=185 Identities=12% Similarity=0.066 Sum_probs=141.9
Q ss_pred HHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHH-HHHHHHHHHhc
Q 018437 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF-KRKWQQKRKEQ 148 (356)
Q Consensus 70 ~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~-~~~~~~~~~~~ 148 (356)
+.+.+++.+.+..+.. +...+ ...++++.+++++|.+. +++|+||++|+..++.++ ..+
T Consensus 12 ~~v~~a~~~~~~~~~~-~~~g~----~~~~l~~~la~~~~~~~-------v~~~~ggt~al~~~~~~l~~~~-------- 71 (394)
T 1o69_A 12 GNELKYIEEVFKSNYI-APLGE----FVNRFEQSVKDYSKSEN-------ALALNSATAALHLALRVAGVKQ-------- 71 (394)
T ss_dssp CCHHHHHHHHHHHTTT-SCTTH----HHHHHHHHHHHHHCCSE-------EEEESCHHHHHHHHHHHTTCCT--------
T ss_pred HHHHHHHHHHHHcCCc-cCCCh----HHHHHHHHHHHHhCCCc-------EEEeCCHHHHHHHHHHHcCCCC--------
Confidence 4566777766654321 11122 33455666888888743 899999999999999886 321
Q ss_pred CCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh---CceEEEEecCCCcccccCCHHHHH
Q 018437 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFEDVKLLH 225 (356)
Q Consensus 149 g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~~~i~~I~ 225 (356)
+++|+++.++|.++..+++..|++++.+|+++ ++.+|+++|++++++ ++++|++++ ++|...|+++|.
T Consensus 72 -----gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~ 142 (394)
T 1o69_A 72 -----DDIVLASSFTFIASVAPICYLKAKPVFIDCDE-TYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIV 142 (394)
T ss_dssp -----TCEEEEESSSCGGGTHHHHHTTCEEEEECBCT-TSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHH
T ss_pred -----CCEEEECCCccHHHHHHHHHcCCEEEEEEeCC-CCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHH
Confidence 46899999999999999999999999999985 589999999999987 788888775 899999999999
Q ss_pred HHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCC
Q 018437 226 DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (356)
Q Consensus 226 ~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~ 294 (356)
++|+++ ++++|+|++|+.+..+ .+. .. .....+|.++++.||.+ +|.++|++++++++
T Consensus 143 ~l~~~~------~~~li~Dea~~~g~~~--~~~-~~-~~~~~~~~~s~s~~K~l-~~~~~G~~~~~~~~ 200 (394)
T 1o69_A 143 EICKEN------DIVLIEDAAEALGSFY--KNK-AL-GTFGEFGVYSYNGNKII-TTSGGGMLIGKNKE 200 (394)
T ss_dssp HHHHHT------TCEEEEECTTCTTCEE--TTE-ET-TSSSSEEEEECCTTSSS-CCSSCEEEEESCHH
T ss_pred HHHHHc------CCEEEEECcCccccee--CCc-cc-ccccCcEEEEEeCCccC-CCCCceEEEECCHH
Confidence 999999 9999999999843321 111 10 01236899999999976 57789999986543
No 111
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.82 E-value=1e-19 Score=175.48 Aligned_cols=191 Identities=12% Similarity=0.104 Sum_probs=146.8
Q ss_pred hHHHHHHHHHHhcccC-CCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHH-HHHHHHHHH
Q 018437 69 EPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF-KRKWQQKRK 146 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~-~~~~~~~~~ 146 (356)
++.+.+++.+.+.... ..+....+..++.+++++.+++++|.+. .+++++||+|+..++.++ ..+
T Consensus 15 ~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~-------~i~~~~gt~al~~~~~~~~~~~------ 81 (418)
T 2c81_A 15 SDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGVPY-------CVPTTSGSTALMLALEALGIGE------ 81 (418)
T ss_dssp CHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTCSE-------EEEESCHHHHHHHHHHHTTCCT------
T ss_pred CHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCCCc-------EEEeCCHHHHHHHHHHHcCCCC------
Confidence 4778888887776432 2233334445566778888999999873 678888999999999876 321
Q ss_pred hcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHH
Q 018437 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHD 226 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~ 226 (356)
+++|+++.++|.++...++..|++++.+|++++++.+|+++|++++++++++|++ +|++|.+.|+++|.+
T Consensus 82 -------gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~---~~~~G~~~~~~~i~~ 151 (418)
T 2c81_A 82 -------GDEVIVPSLTWIATATAVLNVNALPVFVDVEADTYCIDPQLIKSAITDKTKAIIP---VHLFGSMANMDEINE 151 (418)
T ss_dssp -------TCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHGGGCCTTEEEECC---BCCTTCCCCHHHHHH
T ss_pred -------cCEEEECCCccHhHHHHHHHcCCEEEEEecCCCCCCcCHHHHHHhhCCCCeEEEE---eCCcCCcccHHHHHH
Confidence 4789999999999999999999999999998645899999999999888888875 458999999999999
Q ss_pred HHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCC
Q 018437 227 LLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 227 i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~ 293 (356)
+|+++ ++++|+|++|+.+.. + ... ... ....++.+++++||+++++ ..|+++.+++
T Consensus 152 ~~~~~------~~~li~D~a~~~~~~-~-~~~-~~~-~~~~~~~~s~s~~K~~~~g-~~g~~~~~~~ 207 (418)
T 2c81_A 152 IAQEH------NLFVIEDCAQSHGSV-W-NNQ-RAG-TIGDIGAFSCQQGKVLTAG-EGGIIVTKNP 207 (418)
T ss_dssp HHHHT------TCEEEEECTTCTTCE-E-TTE-ETT-SSSSEEEEECCTTSSSCSS-SCEEEEESCH
T ss_pred HHHHC------CCEEEEECcccccCc-c-CCE-ecc-cccceEEEeccCCcccCCC-CeEEEEECCH
Confidence 99999 999999999987652 1 111 110 1223677777789998663 6677776543
No 112
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.82 E-value=2.9e-19 Score=168.31 Aligned_cols=188 Identities=16% Similarity=-0.002 Sum_probs=141.4
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
+++.+.+++.+.+.....++ .++.. ++++++++++|+++ ..+++|+||++++..++.++
T Consensus 40 ~~~~v~~a~~~~~~~~~~y~--~~~~~----~l~~~la~~~~~~~-----~~i~~~~g~t~al~~~~~~~---------- 98 (361)
T 3ftb_A 40 IPKSFLNNIDEGIKNLGVYP--DVNYR----RLNKSIENYLKLKD-----IGIVLGNGASEIIELSISLF---------- 98 (361)
T ss_dssp SCHHHHTTHHHHHHGGGSCC--CTTCH----HHHHHHHHHHTCCS-----CEEEEESSHHHHHHHHHTTC----------
T ss_pred CCHHHHHHHHHHHHHhcCCC--CccHH----HHHHHHHHHhCCCc-----ceEEEcCCHHHHHHHHHHHc----------
Confidence 45788888877765422222 23333 55666888888875 34899999999999988754
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCC---HHHH
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLL 224 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---i~~I 224 (356)
++|+++.++|..+...++..|++++.+|++++ +.+|+++|++++++ +++|++++|+||||.+.| +++|
T Consensus 99 -------d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~~i 169 (361)
T 3ftb_A 99 -------EKILIIVPSYAEYEINAKKHGVSVVFSYLDEN-MCIDYEDIISKIDD-VDSVIIGNPNNPNGGLINKEKFIHV 169 (361)
T ss_dssp -------SEEEEEESCCTHHHHHHHHTTCEEEEEECCTT-SCCCHHHHHHHTTT-CSEEEEETTBTTTTBCCCHHHHHHH
T ss_pred -------CcEEEecCChHHHHHHHHHcCCeEEEeecCcc-cCCCHHHHHHhccC-CCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 47999999999999999999999999999874 68889999999988 999999999999999965 6678
Q ss_pred HHHHHHhhhccCCCCcEEEecccccccccccCCCCcccc-cCCCceEEEEcCCcCCC-CCcCeeEEEEeCC
Q 018437 225 HDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGL-VYAGVGWVVWRTK 293 (356)
Q Consensus 225 ~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~Ds~~~~~hK~l~-~P~g~g~l~~~~~ 293 (356)
.++|+++ |+++|+|++|+.+... ........ .....+.+..+.+|.++ .+.++|++++.++
T Consensus 170 ~~~~~~~------~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~ 232 (361)
T 3ftb_A 170 LKLAEEK------KKTIIIDEAFIEFTGD--PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNK 232 (361)
T ss_dssp HHHHHHH------TCEEEEECSSGGGTCC--TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCH
T ss_pred HHHhhhc------CCEEEEECcchhhcCC--cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCH
Confidence 8888899 9999999999876552 11111111 12233466678999875 4467788875543
No 113
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.82 E-value=1.4e-19 Score=171.73 Aligned_cols=184 Identities=13% Similarity=0.061 Sum_probs=140.8
Q ss_pred HHHHHhcccCCCcccCcchHHHHHHHHHHHHHHh-CCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 018437 75 LVMASINKNYVDMDEYPVTTELQNRCVNMIAHLF-NTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYD 153 (356)
Q Consensus 75 ~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~-g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~ 153 (356)
.+.+.+......|...++..+++++ +++++ ++++ ..+++|+||++|+..++.++.++
T Consensus 47 ~~~~~~~~~~~~y~~~~g~~~l~~~----la~~~~~~~~-----~~v~~~~g~~~a~~~~~~~l~~~------------- 104 (375)
T 3op7_A 47 DFYKKLQGTKLNYGWIEGSPAFKKS----VSQLYTGVKP-----EQILQTNGATGANLLVLYSLIEP------------- 104 (375)
T ss_dssp HHHHHHHTSCCSSCCTTCCHHHHHH----HHTTSSSCCG-----GGEEEESHHHHHHHHHHHHHCCT-------------
T ss_pred HHHHHHhcCCcCCCCCCChHHHHHH----HHHHhccCCh-----hhEEEcCChHHHHHHHHHHhcCC-------------
Confidence 3334444444445555566666666 56655 3444 34899999999999999887542
Q ss_pred CCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEEecCCCcccccCC---HHHHHHHHH
Q 018437 154 KPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLT 229 (356)
Q Consensus 154 ~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---i~~I~~i~~ 229 (356)
+++|+++.++|.++...++..|++++.+|++. +++.+|+++|++++++++++|++++++||+|.+.| +++|.++|+
T Consensus 105 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~ 184 (375)
T 3op7_A 105 GDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIAS 184 (375)
T ss_dssp TCEEEEEESSCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 57999999999999999999999999999974 34789999999999999999999999999999999 999999999
Q ss_pred HhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCC-CCcCeeEEEE
Q 018437 230 KKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVW 290 (356)
Q Consensus 230 ~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~-~P~g~g~l~~ 290 (356)
+| |+++++|++|+.+... +. .........+.+..+++|.++ ...++|+++.
T Consensus 185 ~~------~~~li~De~~~~~~~~---~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~ 236 (375)
T 3op7_A 185 EV------GAYILSDEVYRSFSEL---DV-PSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAA 236 (375)
T ss_dssp TT------TCEEEEECCSCCCSSS---CC-CCHHHHCTTEEEEEESSSSSSCGGGCCEEEEC
T ss_pred Hc------CCEEEEEccccccccc---CC-CchhhhcCCEEEEeEChhhcCCcccceEEEEe
Confidence 99 9999999999875441 10 111112344567778999985 3456788876
No 114
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.82 E-value=2.1e-20 Score=176.13 Aligned_cols=251 Identities=12% Similarity=0.031 Sum_probs=170.2
Q ss_pred CCCChHHHHHHHHHHhccc--CC--Cccc---CcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCCh-hHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASINKN--YV--DMDE---YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGS-SEAIMLAGLA 136 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~--~~--~~~~---~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Gg-t~a~~~al~~ 136 (356)
+.++++.+.+++.+.+... .+ .+.. +++...+.+++++++++++|++.. ..+++|+|+ ++|+..++.+
T Consensus 11 ~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~----~~v~~~~g~gt~al~~~~~~ 86 (360)
T 1w23_A 11 PSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPND----YQILFLQGGASLQFTMLPMN 86 (360)
T ss_dssp SCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTT----EEEEEESSHHHHHHHHHHHH
T ss_pred CcCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC----ceEEEECCcchHHHHHHHHH
Confidence 3355678899988877531 11 1111 556677888999999999999621 248899998 9999998887
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHH-HHhhCceEEEEecCCCcc
Q 018437 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVE-LVDENTICVAAILGSTLT 215 (356)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~-~i~~~~~~v~~~~~~~~t 215 (356)
+..+ | ..+++|+++.++|+++. .++..| +++.+|++++++.+|+++|++ ++++++++|++++++|||
T Consensus 87 l~~~--------~--~~g~~vi~~~~~~~~~~-~~~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~~~~k~v~~~~~~npt 154 (360)
T 1w23_A 87 LLTK--------G--TIGNYVLTGSWSEKALK-EAKLLG-ETHIAASTKANSYQSIPDFSEFQLNENDAYLHITSNNTIY 154 (360)
T ss_dssp HCCT--------T--CEEEEEECSHHHHHHHH-HHHTTS-EEEEEEECGGGTSCSCCCGGGCCCCTTEEEEEEESEETTT
T ss_pred hcCC--------C--CcccEEEecchhHHHHH-HHHHhC-CeEEeecccccCcCCccchHhhccCCCCCEEEEeCCCCCc
Confidence 6431 1 11347888888887744 456779 999999975346789999999 888889999999999999
Q ss_pred cccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCC
Q 018437 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (356)
Q Consensus 216 G~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~ 295 (356)
|.+.| +| ++++ |+++++|++|+.+..+ .++. ..|.++.++||++ +|.|+|+++++++ .
T Consensus 155 G~~~~--~i---~~~~------~~~li~D~a~~~~~~~-------~~~~--~~di~~~s~sK~~-~~~G~G~~~~~~~-~ 212 (360)
T 1w23_A 155 GTQYQ--NF---PEIN------HAPLIADMSSDILSRP-------LKVN--QFGMIYAGAQKNL-GPSGVTVVIVKKD-L 212 (360)
T ss_dssp TEECS--SC---CCCC------SSCEEEECTTTTTSSC-------CCGG--GCSEEEEETTTTT-SCTTCEEEEEEHH-H
T ss_pred ceecc--cc---cccC------CceEEEechhhcCCCC-------cCcc--cCCEEEEEccccc-CCCCcEEEEEcHH-H
Confidence 99865 33 3367 9999999999875442 1222 2388999999987 5889999998753 2
Q ss_pred CccccccccCCCCC-CC--CCccccCCCChhHHHHHHHHHHHhCHH-HHHHHHHHHHhccCcc
Q 018437 296 LPDELVFHINYLGS-DQ--PTFTLNFSKGSSQIIAQYYQFIRLGFE-EITFTFISSLKVCPFL 354 (356)
Q Consensus 296 ~~~~~~~~~~~~~~-~~--~~~~~~~tr~~~~~~~~~~~l~~lg~~-G~~~~~~~~~~~a~~l 354 (356)
. +.+.....+... .. ......++.+....+++..+++.+..+ +++++.++..++++++
T Consensus 213 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l 274 (360)
T 1w23_A 213 L-NTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKII 274 (360)
T ss_dssp H-CSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred H-hhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 1 111110011000 00 000112566666567777778776555 6777777777766654
No 115
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.82 E-value=2.8e-19 Score=172.56 Aligned_cols=199 Identities=11% Similarity=-0.013 Sum_probs=147.7
Q ss_pred ChHHHHHHHHHHhccc-CCCcccCcchHHHHHHHHHHHHHHhCC--CCCCCCCCCeEEeCChhHHHHHHHHHH--HHHHH
Q 018437 68 MEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNT--PVADDKTAVGVGTVGSSEAIMLAGLAF--KRKWQ 142 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~--~~~~~~~~~~~~t~Ggt~a~~~al~~~--~~~~~ 142 (356)
+++.+.+++.+.+..+ ...|....+..++++++.+++....+. +++ ...+++|+||++|+..++..+ .++
T Consensus 68 ~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~---~~~i~~t~G~t~al~~~~~~~~~~~~-- 142 (420)
T 4f4e_A 68 LLRAVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAG---RVVTAQALGGTGALKIGADFLRTLNP-- 142 (420)
T ss_dssp CCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTT---CEEEEEEEHHHHHHHHHHHHHHHHCT--
T ss_pred CcHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccC---ceEEEECCccHHHHHHHHHHHHHhCC--
Confidence 3478999888877652 234555567788888877777654432 221 014899999999999985433 221
Q ss_pred HHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe-cCCccccCHHHHHHHHh---hCceEEEEecCCCccccc
Q 018437 143 QKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL-EEGYYVMNPVKAVELVD---ENTICVAAILGSTLTGEF 218 (356)
Q Consensus 143 ~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~~L~~~i~---~~~~~v~~~~~~~~tG~~ 218 (356)
+++|+++.++|.++...++..|++++.+|+ +++++.+|+++|+++++ ++++++++++++||||.+
T Consensus 143 -----------gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~ 211 (420)
T 4f4e_A 143 -----------KAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVD 211 (420)
T ss_dssp -----------TCCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCC
T ss_pred -----------CCEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCC
Confidence 578999999999999999999999999998 44458999999999998 578899999999999998
Q ss_pred ---CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccc---c-cCCCceEEEEcCCcCCC-CCcCeeEEEE
Q 018437 219 ---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD---F-RLPLVKSINVSGHKYGL-VYAGVGWVVW 290 (356)
Q Consensus 219 ---~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~---~-~~~~~Ds~~~~~hK~l~-~P~g~g~l~~ 290 (356)
+++++|.++|+++ |+++++|++|+++... ....... + .....+.+..|.+|.++ ....+|++++
T Consensus 212 ~~~~~l~~i~~~~~~~------~~~li~De~y~~~~~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 283 (420)
T 4f4e_A 212 LNDAQWAQVVEVVKAR------RLVPFLDIAYQGFGES--IEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSI 283 (420)
T ss_dssp CCHHHHHHHHHHHHHH------TCEEEEEESCTTSSSC--TTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEE
T ss_pred CCHHHHHHHHHHHHHC------CcEEEEccccccccCC--cchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEE
Confidence 4567899999999 9999999999876542 0000111 1 12345677778999875 3456899875
No 116
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.82 E-value=8.8e-20 Score=174.61 Aligned_cols=188 Identities=15% Similarity=0.063 Sum_probs=139.8
Q ss_pred ChHHHHHHHHHHhcccCCCcc--cCc-chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q 018437 68 MEPECDKLVMASINKNYVDMD--EYP-VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~--~~~-~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (356)
+++.+.+++.+.++.....+. .++ +......++++.+++++|++. .+++++|++++..++.++..+
T Consensus 60 ~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~-------~i~~~sGs~a~~~~~~~~~~~---- 128 (401)
T 1fc4_A 60 NHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGMED-------AILYSSCFDANGGLFETLLGA---- 128 (401)
T ss_dssp TCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHTCSE-------EEEESCHHHHHHTTHHHHCCT----
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhCCCc-------EEEeCChHHHHHHHHHHHcCC----
Confidence 357888888877654221111 111 113455677788999998862 466677799999888776432
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh------CceEEEEecCCCccccc
Q 018437 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEF 218 (356)
Q Consensus 145 ~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~ 218 (356)
+++|+++.++|.++...++..|++++.+|. +|+++|++++++ ++++|++++++||||.+
T Consensus 129 ---------gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~ 193 (401)
T 1fc4_A 129 ---------EDAIISDALNHASIIDGVRLCKAKRYRYAN------NDMQELEARLKEAREAGARHVLIATDGVFSMDGVI 193 (401)
T ss_dssp ---------TCEEEEETTCCHHHHHHHHTSCSEEEEECT------TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEE
T ss_pred ---------CCEEEEcchhHHHHHHHHHHcCCceEEECC------CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCC
Confidence 468999999999998889988999887762 478999998875 78999999999999999
Q ss_pred CCHHHHHHHHHHhhhccCCCCcEEEecccc-cccccccCCCC-c--ccccCCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 219 EDVKLLHDLLTKKNEETGWDTPIHVDAASG-GFIAPFLYPDL-E--WDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 219 ~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~-~~~~~~~~~~~-~--~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
.|+++|.++|+++ ++++|+|++|+ ++..+ .... . .++ .+++|.++.++||+++++.| |+++.+
T Consensus 194 ~~~~~i~~l~~~~------~~~li~De~~~~g~~~~--~g~~~~~~~~~-~~~~di~~~s~sK~~~~~~g-G~~~~~ 260 (401)
T 1fc4_A 194 ANLKGVCDLADKY------DALVMVDDSHAVGFVGE--NGRGSHEYCDV-MGRVDIITGTLGKALGGASG-GYTAAR 260 (401)
T ss_dssp CCHHHHHHHHHHT------TEEEEEECTTTTTTSST--TSCCHHHHTTC-TTCCSEEEEESSSTTCSSSC-EEEEEC
T ss_pred CCHHHHHHHHHHc------CCEEEEECcccccccCC--CCCccHHHcCC-CcCCcEEEecchhhccCCCC-EEEEcC
Confidence 9999999999999 99999999996 53311 0111 0 122 23679999999999967776 888874
No 117
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.82 E-value=1.9e-19 Score=172.71 Aligned_cols=159 Identities=16% Similarity=0.113 Sum_probs=132.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHH--
Q 018437 94 TELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA-- 171 (356)
Q Consensus 94 ~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~-- 171 (356)
.....++++++++++|.+. .+++++|++|+..++.++..+ +++|+++.++|.++...+
T Consensus 63 ~~~~~~l~~~la~~~g~~~-------~i~~~sG~~a~~~~l~~~~~~-------------gd~vi~~~~~~~~~~~~~~~ 122 (398)
T 2rfv_A 63 NPTTDALEKKLAVLERGEA-------GLATASGISAITTTLLTLCQQ-------------GDHIVSASAIYGCTHAFLSH 122 (398)
T ss_dssp CHHHHHHHHHHHHHHTCSE-------EEEESSHHHHHHHHHHHHCCT-------------TCEEEEESSSCHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEcCCCcccHHHHHHH
Confidence 3455678888999999863 677788899999999887432 578999999999887776
Q ss_pred --HhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccc
Q 018437 172 --RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (356)
Q Consensus 172 --~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~ 249 (356)
+..|++++.+|++ |+++|++++++++++|++++++||+|.+.|+++|.++|+++ |+++|+|++|+.
T Consensus 123 ~~~~~g~~~~~v~~~------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~------~~~li~De~~~~ 190 (398)
T 2rfv_A 123 SMPKFGINVRFVDAA------KPEEIRAAMRPETKVVYIETPANPTLSLVDIETVAGIAHQQ------GALLVVDNTFMS 190 (398)
T ss_dssp HHHHTTCEEEEECTT------SHHHHHHHCCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHT------TCEEEEECTTTC
T ss_pred HHHHcCCEEEEeCCC------CHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEECCCcc
Confidence 7779999888864 79999999998999999999999999999999999999999 999999999986
Q ss_pred ccccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeC
Q 018437 250 FIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRT 292 (356)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~ 292 (356)
+..+ . ... .++|.++.++||++++|.+ +|+++.++
T Consensus 191 ~~~~----~-~~~---~~~di~~~s~sK~~~~~g~~~~G~~~~~~ 227 (398)
T 2rfv_A 191 PYCQ----Q-PLQ---LGADIVVHSVTKYINGHGDVIGGIIVGKQ 227 (398)
T ss_dssp TTTC----C-GGG---GTCSEEEEETTTTTTCSSCCCCEEEEECH
T ss_pred cccC----C-chh---hCCcEEEEeCcccccCCCCceEEEEEECH
Confidence 5441 1 122 2689999999999888876 69988764
No 118
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.82 E-value=2e-19 Score=172.46 Aligned_cols=183 Identities=15% Similarity=0.040 Sum_probs=139.2
Q ss_pred HHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHH-HHHHHHHHHhc
Q 018437 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF-KRKWQQKRKEQ 148 (356)
Q Consensus 70 ~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~-~~~~~~~~~~~ 148 (356)
+.+.+++.+.+..+ .+...+.. .++++.+++++|.+. .+++++|++|+..++.++ ..+
T Consensus 44 ~~v~~a~~~~~~~~--~y~~~~~~----~~l~~~la~~~~~~~-------~v~~~~Gt~a~~~~l~~~~~~~-------- 102 (399)
T 2oga_A 44 AETDAAIARVLDSG--RYLLGPEL----EGFEAEFAAYCETDH-------AVGVNSGMDALQLALRGLGIGP-------- 102 (399)
T ss_dssp HHHHHHHHHHHHHT--CCSSSHHH----HHHHHHHHHHTTSSE-------EEEESCHHHHHHHHHHHTTCCT--------
T ss_pred HHHHHHHHHHHhcC--CCCCchhH----HHHHHHHHHHHCCCe-------EEEecCHHHHHHHHHHHhCCCC--------
Confidence 67888887776543 22223333 355566888888863 688899999999998876 221
Q ss_pred CCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHH
Q 018437 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLL 228 (356)
Q Consensus 149 g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~ 228 (356)
+++|+++.++|.++..+++..|++++.+|++++++.+|+++|++++++++++|+ ++|++|.+.|+++|.++|
T Consensus 103 -----gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~l~ 174 (399)
T 2oga_A 103 -----GDEVIVPSHTYIASWLAVSATGATPVPVEPHEDHPTLDPLLVEKAITPRTRALL---PVHLYGHPADMDALRELA 174 (399)
T ss_dssp -----TCEEEEESSSCTHHHHHHHHTTCEEEEECBCSSSSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHHH
T ss_pred -----cCEEEECCCccHHHHHHHHHCCCEEEEEecCCCCCCcCHHHHHHhcCCCCeEEE---EeCCcCCccCHHHHHHHH
Confidence 468999999999999999999999999999864589999999999988887776 578999999999999999
Q ss_pred HHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCC--cCCCCCcCeeEEEEeCC
Q 018437 229 TKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGH--KYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 229 ~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~h--K~l~~P~g~g~l~~~~~ 293 (356)
+++ ++++|+|++|+.+... ... .+. ...|.++.|+| |+++.|...|+++.+++
T Consensus 175 ~~~------~~~li~Dea~~~g~~~--~~~---~~~-~~~di~~~S~~~sK~~~~~G~~g~~~~~~~ 229 (399)
T 2oga_A 175 DRH------GLHIVEDAAQAHGARY--RGR---RIG-AGSSVAAFSFYPGKNLGCFGDGGAVVTGDP 229 (399)
T ss_dssp HHH------TCEECEECTTCTTCEE--TTE---ETT-CTTCEEEEECCTTSSSCCSSCCEEEEESCH
T ss_pred HHc------CCEEEEECcccccCcc--CCe---ecc-cccCEEEEeCCCCccCCcCCceEEEEeCCH
Confidence 999 9999999999865331 111 111 12588888885 98865335677776544
No 119
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.82 E-value=4.3e-19 Score=169.45 Aligned_cols=193 Identities=12% Similarity=0.021 Sum_probs=137.6
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
..++.+.+++.+.+.... +...+... ++++.+++++|.+. .+++++||+|+..++.+++...
T Consensus 12 ~~~~~~~~a~~~~~~~~~--~~~~~~~~----~l~~~la~~~~~~~-------~i~~~sGt~a~~~al~~~~~~~----- 73 (390)
T 3b8x_A 12 TWDDLEYKAIQSVLDSKM--FTMGEYVK----QYETQFAKTFGSKY-------AVMVSSGSTANLLMIAALFFTK----- 73 (390)
T ss_dssp CCCHHHHHHHHHHHHHTC--CSSCHHHH----HHHHHHHHHHTCSE-------EEEESCHHHHHHHHHHHTTSSS-----
T ss_pred CCCHHHHHHHHHHHHcCC--CCCChHHH----HHHHHHHHHHCCCc-------EEEECCHHHHHHHHHHHHHhhh-----
Confidence 445777888877775432 22333444 45556888888863 7899999999999988762100
Q ss_pred hcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHH
Q 018437 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHD 226 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~ 226 (356)
..+ -..+++|+++.++|.++...++..|++++.+|++++++.+|+++|++++++++++|+++ +++|.+.|+++|.+
T Consensus 74 ~~~-~~~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~---~~~g~~~~~~~i~~ 149 (390)
T 3b8x_A 74 KPR-LKKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVTDSTKAILTV---NLLGNPNNFDEINK 149 (390)
T ss_dssp SCS-CCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCCTTEEEEEEE---CGGGCCCCHHHHHH
T ss_pred hcC-CCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCccccCcCHHHHHHHhCcCCeEEEEE---CCccChhhHHHHHH
Confidence 000 01246899999999999999999999999999987558999999999999888888876 36788999999999
Q ss_pred HHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 227 LLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 227 i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
+|+++ ++++|+|++|+.+..+ .. ..... ...+.+++..+.|.+.+|.| |+++.++
T Consensus 150 l~~~~------~~~li~D~a~~~g~~~--~~-~~~g~-~~~~~~~s~~~~k~~~~g~g-G~~~~~~ 204 (390)
T 3b8x_A 150 IIGGR------DIILLEDNCESMGATF--NN-KCAGT-FGLMGTFSSFYSNHIATMEG-GCIVTDD 204 (390)
T ss_dssp HHTTS------CCEEEEECTTCTTCEE--TT-EETTS-SSSEEEEECCTTSSSCSSSC-EEEEESC
T ss_pred HHHHc------CCEEEEECcCcccCEE--CC-ccccc-ccceEEEEccCCCCCccCCc-eEEEeCC
Confidence 99999 9999999999855442 11 01111 12233444434444556666 8888765
No 120
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.82 E-value=5.2e-19 Score=170.99 Aligned_cols=206 Identities=16% Similarity=0.075 Sum_probs=154.7
Q ss_pred ccccccCC---CChHHHHHHHHHHhccc---CCCcccCcchHHHHHHHHHHHHHHhCCC-CCCCCCCCeEEeCChhHHHH
Q 018437 59 NLASFVTT---WMEPECDKLVMASINKN---YVDMDEYPVTTELQNRCVNMIAHLFNTP-VADDKTAVGVGTVGSSEAIM 131 (356)
Q Consensus 59 ~l~~~~~~---~~~~~v~~~i~~~~~~~---~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~~~~t~Ggt~a~~ 131 (356)
+|..+.+. .+++.+.+++.+.++.+ ...|....+..++++++.+++.+.+|++ .+. ..+++|+|+++++.
T Consensus 47 dl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~---~~v~~t~G~~~al~ 123 (425)
T 1vp4_A 47 SFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDE---DNLIFTVGSQQALD 123 (425)
T ss_dssp ECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCG---GGEEEEEHHHHHHH
T ss_pred eCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCc---ccEEEeccHHHHHH
Confidence 45444433 24578888888777543 2344444567889999888888877954 211 35899999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh--------Cc
Q 018437 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE--------NT 203 (356)
Q Consensus 132 ~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~--------~~ 203 (356)
.++.++.++ +++|+++.++|..+...++..|++++.+|++++ + +|+++|++++++ ++
T Consensus 124 ~~~~~l~~~-------------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~-~d~~~l~~~l~~~~~~~~~~~~ 188 (425)
T 1vp4_A 124 LIGKLFLDD-------------ESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD-G-MDLNVLERKLSEFDKNGKIKQV 188 (425)
T ss_dssp HHHHHHCCT-------------TCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT-E-ECHHHHHHHHHHHHHTTCGGGE
T ss_pred HHHHHhCCC-------------CCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCC-C-CCHHHHHHHHHhhhhcccCCCc
Confidence 998877432 478999999999999999999999999999864 4 999999999976 67
Q ss_pred eEE-EEecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccc---cCCCceEEEEcCC
Q 018437 204 ICV-AAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF---RLPLVKSINVSGH 276 (356)
Q Consensus 204 ~~v-~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~---~~~~~Ds~~~~~h 276 (356)
++| ++++++||||.+.| +++|.++|+++ ++++++|++|+.+... ......+ ...+.+.+..+++
T Consensus 189 ~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~---g~~~~~~~~~~~~~~~i~~~s~s 259 (425)
T 1vp4_A 189 KFIYVVSNFHNPAGVTTSLEKRKALVEIAEKY------DLFIVEDDPYGALRYE---GETVDPIFKIGGPERVVLLNTFS 259 (425)
T ss_dssp EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHT------TCEEEEECSSTTCBCS---SCCCCCHHHHHCTTTEEEEEEST
T ss_pred eEEEECCCCCCCCCCcCCHHHHHHHHHHHHHc------CCEEEEECCCccccCC---CCCCcCHHHhCCCCCEEEEeccc
Confidence 887 57899999999965 67899999999 9999999999875431 1111111 1224567788899
Q ss_pred cCCCCCcCeeEEEEe
Q 018437 277 KYGLVYAGVGWVVWR 291 (356)
Q Consensus 277 K~l~~P~g~g~l~~~ 291 (356)
|+++....+|+++.+
T Consensus 260 K~~~~G~r~G~~~~~ 274 (425)
T 1vp4_A 260 KVLAPGLRIGMVAGS 274 (425)
T ss_dssp TTTCGGGCEEEEECC
T ss_pred cccccccceEEEeeC
Confidence 998733457999875
No 121
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.81 E-value=9.9e-19 Score=163.14 Aligned_cols=184 Identities=14% Similarity=0.079 Sum_probs=142.9
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+++|.+.+++.+..... ..| ..++.. ++++.+++++|+++ ..+++|+|+++++..++.++ +
T Consensus 29 ~~~~~v~~a~~~~~~~~-~~y-~~~~~~----~lr~~la~~~~~~~-----~~i~~t~G~~~~l~~~~~~~--~------ 89 (337)
T 3p1t_A 29 AVEPRVQAAIAAAAARI-NRY-PFDAEP----RVMRKLAEHFSCPE-----DNLMLVRGIDECFDRISAEF--S------ 89 (337)
T ss_dssp CCCHHHHHHHHHHGGGT-TSC-CTTHHH----HHHHHHHHHHTSCG-----GGEEEESHHHHHHHHHHHHS--T------
T ss_pred CCCHHHHHHHHHhhhhh-ccC-CCCchH----HHHHHHHHHhCcCH-----HHEEEeCCHHHHHHHHHHhc--C------
Confidence 45678888888776532 222 233433 45566888889875 34899999999999888765 2
Q ss_pred hcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHH
Q 018437 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHD 226 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~ 226 (356)
+++|+++.++|.++...++..|++++.+|++++ +.+|+++|+++ .++++|++++|+||||.+.|+++|.+
T Consensus 90 -------gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~~~~l~~ 159 (337)
T 3p1t_A 90 -------SMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDD-LLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQ 159 (337)
T ss_dssp -------TSEEEEESSSCSHHHHHHTTSCCEEEEECBCTT-SSBCHHHHTTC--CTTEEEEEESSCTTTCCCCCHHHHHH
T ss_pred -------CCeEEEeCCCcHHHHHHHHHcCCEEEEecCCCC-CCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 579999999999999999999999999999864 89999999887 46789999999999999999999999
Q ss_pred HHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCC-CCcCeeEEEEe
Q 018437 227 LLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (356)
Q Consensus 227 i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~-~P~g~g~l~~~ 291 (356)
+|+++ ++ +++|++|+.+... . .........+.+..+++|+++ .+.++|+++..
T Consensus 160 l~~~~------~~-~ivDea~~~~~~~---~--~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~ 213 (337)
T 3p1t_A 160 LRQRA------GK-LLIDETYVDYSSF---R--ARGLAYGENELVFRSFSKSYGLAGLRLGALFGP 213 (337)
T ss_dssp HHHHC------SE-EEEECTTGGGSSC---S--SSCCCCBTTEEEEEESSSTTCCTTTCCEEEECC
T ss_pred HHHhC------Cc-EEEECCChhhccc---c--ccccccCCCEEEEeeCchhccCcchheEEEEeC
Confidence 99999 86 6669999864321 1 111223356788889999985 55678988764
No 122
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.81 E-value=6.2e-20 Score=187.99 Aligned_cols=225 Identities=12% Similarity=-0.075 Sum_probs=160.9
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH-HHhhC
Q 018437 97 QNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF-ARYFE 175 (356)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~-~~~~G 175 (356)
-.++++.+++++|.+. ..++++|++++|..++.++..+ +++|+++.+.|.++... +...|
T Consensus 175 i~e~e~~lA~~~gae~------~i~v~nGtt~an~~ai~al~~p-------------GD~VLv~~~~H~S~~~~~~~l~G 235 (730)
T 1c4k_A 175 AVAAEKHAARVYNADK------TYFVLGGSSNANNTVTSALVSN-------------GDLVLFDRNNHKSVYNSALAMAG 235 (730)
T ss_dssp HHHHHHHHHHHTTCSE------EEEESSHHHHHHHHHHHHHCCT-------------TCEEEEETTCCHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHCCCc------EEEECCHHHHHHHHHHHHhcCC-------------CCEEEEcCCchHHHHHHHHHHCC
Confidence 4467778999999974 2567788889999999887543 57999999999999888 88889
Q ss_pred CeeEEEEecCCc----cccCHHHH-----HHHHhhC------c----eEEEEecCCCcccccCCHHHHHHHHHHhhhccC
Q 018437 176 VELKEVKLEEGY----YVMNPVKA-----VELVDEN------T----ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETG 236 (356)
Q Consensus 176 ~~v~~v~~~~~~----~~~d~~~L-----~~~i~~~------~----~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~ 236 (356)
++++.++.+.++ +.+|+++| +++++++ + ++|++++| |++|.+.|+++|+++|+++
T Consensus 236 a~~v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~----- 309 (730)
T 1c4k_A 236 GRPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHL----- 309 (730)
T ss_dssp CEEEEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGG-----
T ss_pred CEEEEEeCCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHc-----
Confidence 999999875322 45788888 9998765 4 78889988 4899999999999999999
Q ss_pred CCCcEEEecccccccccccCCC----CcccccCCCce----EEEEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCC
Q 018437 237 WDTPIHVDAASGGFIAPFLYPD----LEWDFRLPLVK----SINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLG 308 (356)
Q Consensus 237 ~~~~l~vD~a~~~~~~~~~~~~----~~~~~~~~~~D----s~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~ 308 (356)
++++|+|+||+.++. +.+. ...+....++| .++.|+||++.+|.++|+++++++..... ..+..
T Consensus 310 -g~~livDeAh~~~~~--f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~g~-----~~~i~ 381 (730)
T 1c4k_A 310 -CDYIEFDSAWVGYEQ--FIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKGQ-----LRYCD 381 (730)
T ss_dssp -BSEEEEECTTCCGGG--SSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGTTS-----TTCCC
T ss_pred -CCeEEEEcccccccc--cCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhhcCc-----ccccC
Confidence 999999999975422 1111 11222223677 89999999999999999999887532100 00000
Q ss_pred CCC----CCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 309 SDQ----PTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 309 ~~~----~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
... ......+|.+...++++-+++..+..++-++++++..++++++
T Consensus 382 ~~~~~~~~~~~~stsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~l 431 (730)
T 1c4k_A 382 HKHFNNSFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEA 431 (730)
T ss_dssp HHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 000 0001124666666777777888777644456667777776655
No 123
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.81 E-value=1e-18 Score=170.46 Aligned_cols=207 Identities=15% Similarity=0.082 Sum_probs=156.1
Q ss_pred cccccccCCC---ChHHHHHHHHHHhccc---CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHH
Q 018437 58 LNLASFVTTW---MEPECDKLVMASINKN---YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIM 131 (356)
Q Consensus 58 ~~l~~~~~~~---~~~~v~~~i~~~~~~~---~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~ 131 (356)
++|.++.+.. +++.+.+++.+.+... ...|....+..++++.+.+++.+.+|++ +. ..+++|+|+++++.
T Consensus 79 i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~-~~---~~v~~t~G~~~al~ 154 (448)
T 3aow_A 79 ISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGIS-QD---NDIMITSGSQQALD 154 (448)
T ss_dssp EECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCC-TT---SEEEEESSHHHHHH
T ss_pred EeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcC-Ch---hhEEEeCcHHHHHH
Confidence 3555555442 4567888887776542 1344445577889989888888888984 21 35899999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHh----h--CceE
Q 018437 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----E--NTIC 205 (356)
Q Consensus 132 ~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~----~--~~~~ 205 (356)
.++.++.++ +++|+++.++|..+...++..|++++.||++++ + +|+++|+++++ + ++++
T Consensus 155 ~~~~~l~~~-------------Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-g-~d~~~L~~~l~~~~~~~~~~k~ 219 (448)
T 3aow_A 155 LIGRVFLNP-------------GDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE-G-MKVEILEEKLKELKSQGKKVKV 219 (448)
T ss_dssp HHHHHHCCT-------------TCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT-E-ECHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHcCC-------------CCEEEEeCCChHHHHHHHHHcCCEEEEeccCCC-C-CCHHHHHHHHhhhhccCCCCeE
Confidence 999887542 578999999999999999999999999999874 4 99999999997 5 7888
Q ss_pred E-EEecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCc---ccccCCCceEEEEcCCcC
Q 018437 206 V-AAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE---WDFRLPLVKSINVSGHKY 278 (356)
Q Consensus 206 v-~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~---~~~~~~~~Ds~~~~~hK~ 278 (356)
| ++++++||||.+.+ +++|.++|+++ ++++++|++|+.+... .... ..+...+.+.+..+++|+
T Consensus 220 v~~~~~~~NPtG~~~~~~~l~~i~~la~~~------~~~lI~De~y~~~~~~---g~~~~~~~~~~~~~~vi~~~S~SK~ 290 (448)
T 3aow_A 220 VYTVPTFQNPAGVTMNEDRRKYLLELASEY------DFIVVEDDPYGELRYS---GNPEKKIKALDNEGRVIYLGTFSKI 290 (448)
T ss_dssp EEECCSSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEECSCTTCBCS---SCCCCCTGGGCTTSCEEEEEESTTT
T ss_pred EEECCCCCCCcCCCCCHHHHHHHHHHHHHc------CCEEEEECCCccccCC---CCCCcCHHhcCCCCCEEEEccchhh
Confidence 7 46899999999865 56899999999 9999999999876541 1111 122222456677789999
Q ss_pred CCCCcCeeEEEEeC
Q 018437 279 GLVYAGVGWVVWRT 292 (356)
Q Consensus 279 l~~P~g~g~l~~~~ 292 (356)
++....+|+++.++
T Consensus 291 ~~~GlriG~v~~~~ 304 (448)
T 3aow_A 291 LAPGFRIGWMVGDP 304 (448)
T ss_dssp TCGGGCCEEEEECH
T ss_pred ccccccEEEEEeCH
Confidence 86333589998853
No 124
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.81 E-value=2.2e-19 Score=172.60 Aligned_cols=191 Identities=10% Similarity=-0.084 Sum_probs=141.6
Q ss_pred ChHHHHHHHHHHhcccCC---CcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q 018437 68 MEPECDKLVMASINKNYV---DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~---~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (356)
.+|.+.+++.+.+..... .+....+......++++++++++|.+. .+++++|++++..++.++.++
T Consensus 74 ~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~-------~i~~~sGt~a~~~~l~~~~~~---- 142 (409)
T 3kki_A 74 NHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTGFDE-------CLLSQSGWNANVGLLQTICQP---- 142 (409)
T ss_dssp TCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHTCSE-------EEEESCHHHHHHHHHHHHCCT----
T ss_pred CCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhCCCe-------EEEecchHHHHHHHHHHhcCC----
Confidence 357888888877764221 111222333445567778999999874 566777889999998877542
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh-CceEEEEecCCCcccccCCHHH
Q 018437 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKL 223 (356)
Q Consensus 145 ~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~i~~ 223 (356)
++.|+++.++|.++...++..|++++.++. +|+++|++++++ ++++|++++++||||.+.|+++
T Consensus 143 ---------gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~ 207 (409)
T 3kki_A 143 ---------NTNVYIDFFAHMSLWEGARYANAQAHPFMH------NNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAE 207 (409)
T ss_dssp ---------TCEEEEETTSCHHHHHHHHHTTCEEEEECT------TCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHH
T ss_pred ---------CCEEEECCCcCHHHHHHHHHcCCeEEEecC------CCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHH
Confidence 579999999999999999999998876653 589999999986 5899999999999999999999
Q ss_pred HHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 224 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 224 I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
|.++|+++ |+++++|++|+++............+. ...+|.++.+.+|+++.+ | |+++.++
T Consensus 208 l~~la~~~------~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~-g-g~v~~~~ 269 (409)
T 3kki_A 208 LVNISKEF------GCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYR-A-GAIWCNN 269 (409)
T ss_dssp HHHHHHHH------TCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSS-C-EEEEESS
T ss_pred HHHHHHHc------CCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCC-c-eEEEECH
Confidence 99999999 999999999987544211110000111 135789899999998655 3 7776643
No 125
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.81 E-value=1.8e-19 Score=172.93 Aligned_cols=158 Identities=16% Similarity=0.081 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHH---
Q 018437 95 ELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA--- 171 (356)
Q Consensus 95 ~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~--- 171 (356)
....++++.+++++|.+. .+++++|++|+..++.++..+ +++|+++.++|.++...+
T Consensus 65 ~~~~~l~~~la~~~g~~~-------~i~~~sG~~a~~~~l~~~~~~-------------gd~vl~~~~~~~~~~~~~~~~ 124 (398)
T 1gc0_A 65 PTLNLLEARMASLEGGEA-------GLALASGMGAITSTLWTLLRP-------------GDEVLLGNTLYGCTFAFLHHG 124 (398)
T ss_dssp HHHHHHHHHHHHHHTCSE-------EEEESSHHHHHHHHHHHHCCT-------------TCEEEEESSCCSHHHHHHHHT
T ss_pred hHHHHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhcC-------------CCEEEEeCCCchhHHHHHHHH
Confidence 344567777999999863 577777899999999887432 478999999999877765
Q ss_pred -HhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccc
Q 018437 172 -RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGF 250 (356)
Q Consensus 172 -~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~ 250 (356)
...|++++.++.+ |+++|++++++++++|++++++||+|.+.|+++|.++|+++ |+++|+|++|+.+
T Consensus 125 ~~~~g~~~~~~~~~------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~------~~~li~D~~~~~~ 192 (398)
T 1gc0_A 125 IGEFGVKLRHVDMA------DLQALEAAMTPATRVIYFESPANPNMHMADIAGVAKIARKH------GATVVVDNTYCTP 192 (398)
T ss_dssp GGGGTCEEEEECTT------CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHGGG------TCEEEEECTTTHH
T ss_pred HHHcCCEEEEECCC------CHHHHHHhcCCCCeEEEEECCCCCCcccccHHHHHHHHHHc------CCEEEEECCCccc
Confidence 5678888888753 78999999998999999999999999999999999999999 9999999999876
Q ss_pred cccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeC
Q 018437 251 IAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRT 292 (356)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~ 292 (356)
..+ . +.. .++|.++.++||++++|.+ .|+++.++
T Consensus 193 ~~~--~---~~~---~~~d~~~~S~sK~~~~~~~~~~G~l~~~~ 228 (398)
T 1gc0_A 193 YLQ--R---PLE---LGADLVVHSATKYLSGHGDITAGIVVGSQ 228 (398)
T ss_dssp HHC--C---GGG---GTCSEEEEETTTTTTCSSSCCCEEEEECH
T ss_pred ccC--C---chh---hCceEEEECCccccCCCCCCeEEEEEECh
Confidence 541 1 121 3689999999999988876 68888764
No 126
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.81 E-value=1.7e-19 Score=172.95 Aligned_cols=156 Identities=13% Similarity=-0.014 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHH----H
Q 018437 97 QNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA----R 172 (356)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~----~ 172 (356)
.+++++.+++++|.+. .++++||++|+..++.++..+ +++|+++.++|.++...+ +
T Consensus 68 ~~~l~~~la~~~g~~~-------~~~~~sGt~A~~~al~~~~~~-------------gd~Vi~~~~~y~~~~~~~~~~~~ 127 (392)
T 3qhx_A 68 RTALEAALAAVEDAAF-------GRAFSSGMAAADCALRAMLRP-------------GDHVVIPDDAYGGTFRLIDKVFT 127 (392)
T ss_dssp HHHHHHHHHHHTTCSE-------EEEESSHHHHHHHHHHHHCCT-------------TCEEEEETTCCHHHHHHHHHTGG
T ss_pred HHHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEeCCCcchHHHHHHHHHH
Confidence 4466777999999863 789999999999999877432 578999999998776655 5
Q ss_pred hhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccc
Q 018437 173 YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA 252 (356)
Q Consensus 173 ~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~ 252 (356)
..|++++.+|++ |+++|++++++++++|++..++||+|.+.|+++|.++|+++ |+++|+|++|+.++.
T Consensus 128 ~~g~~~~~v~~~------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~------g~~li~D~~~~~~~~ 195 (392)
T 3qhx_A 128 GWNVEYTPVALA------DLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQLGADS------SAKVLVDNTFASPAL 195 (392)
T ss_dssp GGTCEEEEECTT------CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHH------TCEEEEECTTTCTTT
T ss_pred hcCcEEEEeCCC------CHHHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHHHHHHc------CCEEEEECCCccccc
Confidence 678899888864 89999999999999999999999999999999999999999 999999999975432
Q ss_pred cccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeC
Q 018437 253 PFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRT 292 (356)
Q Consensus 253 ~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~ 292 (356)
.. +.. .++|.++.|.||+++++.+ .|+++.++
T Consensus 196 --~~---~~~---~~~di~~~S~sK~lg~~g~~~~G~v~~~~ 229 (392)
T 3qhx_A 196 --QQ---PLS---LGADVVLHSTTKYIGGHSDVVGGALVTND 229 (392)
T ss_dssp --CC---GGG---GTCSEEEEETTTTTTCSSCCCCEEEEESC
T ss_pred --CC---hHH---hCCcEEEEcCccccCCCCCceEEEEEECc
Confidence 11 122 3789999999999866543 78888764
No 127
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.81 E-value=1.4e-18 Score=164.32 Aligned_cols=186 Identities=12% Similarity=0.081 Sum_probs=139.3
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
+++.+.+++.+.+... ..|.. ++.. ++++.+++++|+++ ..+++|+|+++++..++.++ +
T Consensus 38 ~~~~v~~a~~~~~~~~-~~y~~-~~~~----~l~~~la~~~~~~~-----~~v~~~~g~~~al~~~~~~~--~------- 97 (364)
T 1lc5_A 38 MPVSVKRALIDNLDCI-ERYPD-ADYF----HLHQALARHHQVPA-----SWILAGNGETESIFTVASGL--K------- 97 (364)
T ss_dssp CCHHHHHHHHHTGGGG-GSCCC-TTCH----HHHHHHHHHHTSCG-----GGEEEESSHHHHHHHHHHHH--C-------
T ss_pred CCHHHHHHHHHHHHHh-hcCCC-CCHH----HHHHHHHHHHCcCH-----HHEEECCCHHHHHHHHHHHc--C-------
Confidence 4578888888776532 22221 2334 45555777888865 34899999999999998876 2
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEEecCCCcccccCC---HHH
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKL 223 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---i~~ 223 (356)
+++|+++.++|..+...++..|++++.+|+++ +++.+ ++++.+++.+++++|++++|+||||.+.| +++
T Consensus 98 ------gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 170 (364)
T 1lc5_A 98 ------PRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQA 170 (364)
T ss_dssp ------CSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHH
T ss_pred ------CCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhccCCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 46899999999999999999999999999875 22333 46566666677889999999999999988 899
Q ss_pred HHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccc-cCCCceEEEEcCCcCCCCC-cCeeEEE
Q 018437 224 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGLVY-AGVGWVV 289 (356)
Q Consensus 224 I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~Ds~~~~~hK~l~~P-~g~g~l~ 289 (356)
|.++|+++ ++++|+|++|+.+... .....++ ...+.+.+..++||+++.| ..+|+++
T Consensus 171 i~~~~~~~------~~~li~De~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 229 (364)
T 1lc5_A 171 IADRCKSL------NINLILDEAFIDFIPH---ETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLV 229 (364)
T ss_dssp HHHHHHHH------TCEEEEECTTGGGSTT---CCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEE
T ss_pred HHHHhhhc------CcEEEEECcChhhccC---ccchhhHhccCCCEEEEEECchhhcCCccceEEEE
Confidence 99999999 9999999999876531 1111221 2235688888999998533 4579988
No 128
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.80 E-value=1.6e-19 Score=173.72 Aligned_cols=156 Identities=15% Similarity=0.060 Sum_probs=130.8
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH----HHH
Q 018437 97 QNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK----FAR 172 (356)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~----~~~ 172 (356)
.+++++.+++++|.+. .++++||++|+..++.++.++ +++|+++.+.|.++.. .++
T Consensus 64 ~~~l~~~ia~~~g~~~-------~i~~~~g~~ai~~~~~~l~~~-------------gd~Vl~~~~~y~~~~~~~~~~~~ 123 (404)
T 1e5e_A 64 VSNLEGKIAFLEKTEA-------CVATSSGMGAIAATVLTILKA-------------GDHLISDECLYGCTHALFEHALT 123 (404)
T ss_dssp HHHHHHHHHHHHTCSE-------EEEESSHHHHHHHHHHHHCCT-------------TCEEEEESCCCHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHhCCCc-------EEEeCChHHHHHHHHHHHhCC-------------CCEEEEeCCCchhHHHHHHHHHH
Confidence 3456677888988863 788889999999998876432 5789999999999888 677
Q ss_pred hhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHH-hhhccCCCCcEEEeccccccc
Q 018437 173 YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTK-KNEETGWDTPIHVDAASGGFI 251 (356)
Q Consensus 173 ~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~-~~~~~~~~~~l~vD~a~~~~~ 251 (356)
..|++++.+|++ |+++|++++++++++|++++|+||+|.+.|+++|.++|++ + |+++++|++|+.+.
T Consensus 124 ~~g~~~~~v~~~------d~~~l~~~i~~~t~~v~l~~p~NptG~v~~l~~i~~la~~~~------~~~li~De~~~~~~ 191 (404)
T 1e5e_A 124 KFGIQVDFINTA------IPGEVKKHMKPNTKIVYFETPANPTLKIIDMERVCKDAHSQE------GVLVIADNTFCSPM 191 (404)
T ss_dssp HTTCEEEEECTT------STTHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTST------TCEEEEECTTTCTT
T ss_pred HcCCEEEEECCC------CHHHHHHhcCCCCcEEEEECCCCCCCcccCHHHHHHHHHhhc------CCEEEEECCCchhh
Confidence 889999988864 7789999999899999999999999999999999999999 9 99999999998765
Q ss_pred ccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeC
Q 018437 252 APFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRT 292 (356)
Q Consensus 252 ~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~ 292 (356)
.. .+.. .++|.+..|+||++++|.+ +|+++.++
T Consensus 192 ~~-----~~~~---~~~di~~~S~sK~~~~~g~ri~G~~~~~~ 226 (404)
T 1e5e_A 192 IT-----NPVD---FGVDVVVHSATKYINGHTDVVAGLICGKA 226 (404)
T ss_dssp TC-----CGGG---GTCSEEEEETTTTTTCSSCCCCEEEEECH
T ss_pred hC-----Cccc---cCCEEEEEcCccccCCCCCCeEEEEEECH
Confidence 31 1222 2689999999999888876 69998765
No 129
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.80 E-value=3.4e-19 Score=170.21 Aligned_cols=204 Identities=11% Similarity=-0.028 Sum_probs=145.9
Q ss_pred ChHHHHHHHHH-Hhccc-CCCcccCcchHHHHHHHHHHHHHHhCC--CCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHH
Q 018437 68 MEPECDKLVMA-SINKN-YVDMDEYPVTTELQNRCVNMIAHLFNT--PVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (356)
Q Consensus 68 ~~~~v~~~i~~-~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~--~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (356)
.++.+.+++.+ .+... ...|....+..++++++.+++.+..+. +++ ...+++|+||++++..++..+...
T Consensus 45 ~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~---~~~i~~t~g~~~a~~~~~~~~~~~--- 118 (397)
T 3fsl_A 45 QLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQ---RVATIQTLGGSGALKVGADFLKRY--- 118 (397)
T ss_dssp CCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTT---CEEEEEESHHHHHHHHHHHHHHHH---
T ss_pred CcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCccccccc---ceEEEEcCCcHHHHHHHHHHHHhc---
Confidence 34789999888 77642 234445567778888877777654432 221 014799999999999986433211
Q ss_pred HHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec-CCccccCHHHHHHHHh---hCceEEEEecCCCccccc-
Q 018437 144 KRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVD---ENTICVAAILGSTLTGEF- 218 (356)
Q Consensus 144 ~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~L~~~i~---~~~~~v~~~~~~~~tG~~- 218 (356)
..+++|+++.++|..+...++..|++++.+|++ ++++.+|+++|+++++ ++++++++++++||||.+
T Consensus 119 --------~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~ 190 (397)
T 3fsl_A 119 --------FPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADL 190 (397)
T ss_dssp --------CTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCC
T ss_pred --------CCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCC
Confidence 014689999999999999999999999999983 3358999999999998 567889999999999999
Q ss_pred --CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCc-ccc-cCCCceEEEEcCCcCCC-CCcCeeEEEEe
Q 018437 219 --EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDF-RLPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (356)
Q Consensus 219 --~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~-~~~~~Ds~~~~~hK~l~-~P~g~g~l~~~ 291 (356)
+++++|.++|+++ ++++|+|++|+.+....-.+... ..+ .......+..+.+|.++ ...++|+++..
T Consensus 191 ~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~ 262 (397)
T 3fsl_A 191 TNDQWDAVIEILKAR------ELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVM 262 (397)
T ss_dssp CHHHHHHHHHHHHHT------TCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEE
T ss_pred CHHHHHHHHHHHHhC------CEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEe
Confidence 4566999999999 99999999998765420000000 111 12334566677899875 34458888763
No 130
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.80 E-value=6.2e-19 Score=170.87 Aligned_cols=218 Identities=11% Similarity=-0.017 Sum_probs=154.2
Q ss_pred cCCCC--cccccccCCCChHHHHHHHHHHhcccC------------CCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCC
Q 018437 53 DGNPR--LNLASFVTTWMEPECDKLVMASINKNY------------VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTA 118 (356)
Q Consensus 53 ~~~~~--~~l~~~~~~~~~~~v~~~i~~~~~~~~------------~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~ 118 (356)
+++|. ++|+.-......+.+.+++.+...... ..|....+..++++++.+++.+..|....- ...
T Consensus 34 ~~~p~~~i~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~-~~~ 112 (435)
T 3piu_A 34 VHNTNGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTF-DPN 112 (435)
T ss_dssp TTBTTSBEECSSCCCCSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCC-CGG
T ss_pred ccCCCCeEEeccccccccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCC-CHH
Confidence 34443 244333333445667777765443211 123344567888988888888766522100 113
Q ss_pred CeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHH-hhCCeeEEEEecCC-ccccCHHHHH
Q 018437 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFAR-YFEVELKEVKLEEG-YYVMNPVKAV 196 (356)
Q Consensus 119 ~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~-~~G~~v~~v~~~~~-~~~~d~~~L~ 196 (356)
.+++|+||++|+..++.+++++ ++.|+++.++|.++...+. ..|++++.++.+++ ++.+|+++|+
T Consensus 113 ~v~~~~gg~~a~~~~~~~l~~~-------------gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 179 (435)
T 3piu_A 113 HLVLTAGATSANETFIFCLADP-------------GEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALE 179 (435)
T ss_dssp GEEEEEHHHHHHHHHHHHHCCT-------------TCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHH
T ss_pred HEEEcCChHHHHHHHHHHhcCC-------------CCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHH
Confidence 5899999999999999887542 5789999999999998888 78999999999753 3779999999
Q ss_pred HHHhh------CceEEEEecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccc---c
Q 018437 197 ELVDE------NTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF---R 264 (356)
Q Consensus 197 ~~i~~------~~~~v~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~---~ 264 (356)
+++++ ++++|++++|+||||.+.+ +++|.++|+++ ++++++|++|+++... ......+ .
T Consensus 180 ~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~------~~~li~Dea~~~~~~~---~~~~~~~~~~~ 250 (435)
T 3piu_A 180 EAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDK------GIHLISDEIYSGTAFS---SPSFISVMEVL 250 (435)
T ss_dssp HHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEECTTGGGCCS---SSCCCCHHHHH
T ss_pred HHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHc------CCEEEEeccccccccC---CCCCcCHHHhc
Confidence 99986 7899999999999999854 58888999999 9999999999875441 1111111 1
Q ss_pred -C---------CCceEEEEcCCcCCC-CCcCeeEEEEeCC
Q 018437 265 -L---------PLVKSINVSGHKYGL-VYAGVGWVVWRTK 293 (356)
Q Consensus 265 -~---------~~~Ds~~~~~hK~l~-~P~g~g~l~~~~~ 293 (356)
. .....+..++||+++ .+..+|+++..++
T Consensus 251 ~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~ 290 (435)
T 3piu_A 251 KDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDD 290 (435)
T ss_dssp HC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCH
T ss_pred cccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCH
Confidence 1 122367788999885 4567899987543
No 131
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.80 E-value=1.7e-18 Score=166.99 Aligned_cols=159 Identities=16% Similarity=0.036 Sum_probs=128.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH----H
Q 018437 96 LQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF----A 171 (356)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~----~ 171 (356)
..+++++++++++|.+. +++|+||++|+..++.++..+ +++|+++.++|.++... +
T Consensus 57 ~~~~l~~~la~~~g~~~-------~~~~~~gt~a~~~al~~l~~~-------------gd~vi~~~~~~~~~~~~~~~~~ 116 (412)
T 2cb1_A 57 TAKALEERLKALEGALE-------AVVLASGQAATFAALLALLRP-------------GDEVVAAKGLFGQTIGLFGQVL 116 (412)
T ss_dssp HHHHHHHHHHHHHTCSE-------EEEESSHHHHHHHHHHTTCCT-------------TCEEEEETTCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEeCCCchhHHHHHHHHH
Confidence 34567777999999863 789999999999999876321 57899999999876655 3
Q ss_pred HhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccccc
Q 018437 172 RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFI 251 (356)
Q Consensus 172 ~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~ 251 (356)
+..|++++.++++ +++|++++++++++|++++++|++|.+.|+++|.++|+++ |+++|+|++|+.+.
T Consensus 117 ~~~g~~~~~~~~~-------~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~------~~~li~D~~~~~~~ 183 (412)
T 2cb1_A 117 SLMGVTVRYVDPE-------PEAVREALSAKTRAVFVETVANPALLVPDLEALATLAEEA------GVALVVDNTFGAAG 183 (412)
T ss_dssp TTTTCEEEEECSS-------HHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHH------TCEEEEECGGGTTT
T ss_pred HHcCCEEEEECCC-------HHHHHHHhccCCeEEEEeCCCCCCcccccHHHHHHHHHHc------CCEEEEECCCcccc
Confidence 4578888888753 8999999999999999999999999999999999999999 99999999998752
Q ss_pred ccccCCCCcccccCCCceEEEEcCCcCCCCCcC-eeEEEEeCCC
Q 018437 252 APFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG-VGWVVWRTKD 294 (356)
Q Consensus 252 ~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g-~g~l~~~~~~ 294 (356)
.. .. ... .++|.++.|+||++++|.+ +|.+++.++.
T Consensus 184 ~~-~~---~~~---~~~di~~~S~~K~~~~~~~~~G~~~~~~~~ 220 (412)
T 2cb1_A 184 AL-CR---PLA---WGAHVVVESLTKWASGHGSVLGGAVLSRET 220 (412)
T ss_dssp TS-CC---GGG---GTCSEEEEETTTTTTCSSCCCCEEEEECCC
T ss_pred cc-CC---ccc---cCCeEEEECCcccccCCCCcEEEEEEeccc
Confidence 21 11 111 3689999999999988876 7888776643
No 132
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.80 E-value=1.7e-18 Score=171.21 Aligned_cols=197 Identities=12% Similarity=-0.033 Sum_probs=148.2
Q ss_pred HHHHHHHHHhcc----cCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHH-HHHHHHH
Q 018437 71 ECDKLVMASINK----NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFK-RKWQQKR 145 (356)
Q Consensus 71 ~v~~~i~~~~~~----~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~-~~~~~~~ 145 (356)
.+.+.+.+.+.. ....|....+...+++++.+++.+..|.+.+. ..+++|+|+++++.+++.++. .+
T Consensus 110 ~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~---~~i~~t~G~~~al~~~~~~l~~~~----- 181 (500)
T 3tcm_A 110 DSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANA---DDIFLTDGASPGVHLMMQLLIRNE----- 181 (500)
T ss_dssp HHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCG---GGEEEESSSHHHHHHHHHHHCCST-----
T ss_pred HHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCc---ccEEEcCCHHHHHHHHHHHHcCCC-----
Confidence 344444455544 23446666788999999999999988866422 458999999999999998874 32
Q ss_pred HhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCC-ccccCHHHHHHHHhh------CceEEEEecCCCccccc
Q 018437 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDE------NTICVAAILGSTLTGEF 218 (356)
Q Consensus 146 ~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~ 218 (356)
+++|+++.++|.++...++..|++++.++++++ +|.+|+++|++++++ ++++|++++|+||||.+
T Consensus 182 --------gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~ 253 (500)
T 3tcm_A 182 --------KDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQV 253 (500)
T ss_dssp --------TEEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCC
T ss_pred --------CCEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCccc
Confidence 579999999999999999999999999999864 479999999999987 68899999999999999
Q ss_pred CC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc---------CCCceEE-EEcCCcCCCC--Cc
Q 018437 219 ED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR---------LPLVKSI-NVSGHKYGLV--YA 283 (356)
Q Consensus 219 ~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~---------~~~~Ds~-~~~~hK~l~~--P~ 283 (356)
.+ +++|.++|+++ ++++++|++|+.+... .......+. ......+ ..|++|.+++ ..
T Consensus 254 ~s~~~l~~i~~la~~~------~~~li~Deay~~~~~~--~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~ 325 (500)
T 3tcm_A 254 LAEENQYDIVKFCKNE------GLVLLADEVYQENIYV--DNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGK 325 (500)
T ss_dssp CCHHHHHHHHHHHHHH------TCEEEEECTTTTCBCC--TTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGG
T ss_pred CCHHHHHHHHHHHHHc------CCEEEEecCccccccC--CCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCcc
Confidence 54 67778889999 9999999999876541 111111110 1123334 3479998743 45
Q ss_pred CeeEEEEe
Q 018437 284 GVGWVVWR 291 (356)
Q Consensus 284 g~g~l~~~ 291 (356)
.+|++++.
T Consensus 326 R~G~~~~~ 333 (500)
T 3tcm_A 326 RGGYFEIT 333 (500)
T ss_dssp CCEEEEEE
T ss_pred ceEEEEEe
Confidence 67888874
No 133
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.80 E-value=5.3e-18 Score=164.90 Aligned_cols=220 Identities=14% Similarity=0.046 Sum_probs=153.7
Q ss_pred HHHHHHHHHHhhh-cCCCCcccccccCCC-ChHHHHHHHHHHhcc-----cCCCcccCcchHHHHHHHHHHHHHHhCCCC
Q 018437 40 EAAYQVINDELML-DGNPRLNLASFVTTW-MEPECDKLVMASINK-----NYVDMDEYPVTTELQNRCVNMIAHLFNTPV 112 (356)
Q Consensus 40 ~~i~~~~~~~~~~-~~~~~~~l~~~~~~~-~~~~v~~~i~~~~~~-----~~~~~~~~~~~~~le~~~~~~la~l~g~~~ 112 (356)
.++.+........ ++...++|+.+.++. .++.+.+++.+.+.. ....|....+..++++++.+++. .|++.
T Consensus 53 ~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~ 130 (449)
T 3qgu_A 53 PEIARRRKAHQEKNPDAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFY--GHAGR 130 (449)
T ss_dssp HHHHHHHHHHHHHCTTCCCEECSSCCCCCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHH--TTTTC
T ss_pred HHHHHHHHHHHhhCCCCCEEEeeCCCCCCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHH--cCCCC
Confidence 3444444443332 344445666655543 457888888877653 22234444567788888777766 55543
Q ss_pred CCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCe----------eEEEE
Q 018437 113 ADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE----------LKEVK 182 (356)
Q Consensus 113 ~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~----------v~~v~ 182 (356)
+ ...+++|+|+++++..+ .++.++ +++|+++.++|.++...++..|++ ++.+|
T Consensus 131 ~---~~~i~~t~G~~~al~~~-~~l~~~-------------gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~ 193 (449)
T 3qgu_A 131 A---ADEIFISDGSKCDIARI-QMMFGS-------------KPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMV 193 (449)
T ss_dssp C---GGGEEEESCHHHHHHHH-HHHHCS-------------SSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEE
T ss_pred C---HHHEEEccCHHHHHHHH-HHHhCC-------------CCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEe
Confidence 2 14589999999999887 554332 578999999999999999999998 99999
Q ss_pred ecCC-ccccCHHHHHHHHhhCceEEEEecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCC
Q 018437 183 LEEG-YYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD 258 (356)
Q Consensus 183 ~~~~-~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~ 258 (356)
++++ .+..|++++ +++++|++++|+||||.+-+ +++|.++|+++ ++++++|++|+++... +.
T Consensus 194 ~~~~~~~~~~~~~~-----~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~------~~~li~Dea~~~~~~~---~~ 259 (449)
T 3qgu_A 194 CNPDNHFFPDLSKA-----KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKN------GSILVYDAAYALYISN---PD 259 (449)
T ss_dssp CCGGGTTCCCGGGC-----CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEECTTGGGCCC---TT
T ss_pred cccccCCcCChhHc-----CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHC------CcEEEEEcchHhhhcC---CC
Confidence 9753 355554332 57889999999999999855 78888999999 9999999999986542 11
Q ss_pred Cccccc-C---CCceEEEEcCCcCCC-CCcCeeEEEEeC
Q 018437 259 LEWDFR-L---PLVKSINVSGHKYGL-VYAGVGWVVWRT 292 (356)
Q Consensus 259 ~~~~~~-~---~~~Ds~~~~~hK~l~-~P~g~g~l~~~~ 292 (356)
....+. . .+.+.+..+++|+++ ...++|+++.++
T Consensus 260 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 298 (449)
T 3qgu_A 260 CPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPK 298 (449)
T ss_dssp SCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCT
T ss_pred CCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCH
Confidence 112221 1 346788889999985 557789998754
No 134
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.80 E-value=2.2e-19 Score=168.33 Aligned_cols=185 Identities=14% Similarity=0.057 Sum_probs=131.4
Q ss_pred CCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (356)
.+++++.+.+++...... ...+...++.. ++++++++++|.+. .++++||++++..++.++.++
T Consensus 13 ~~~p~~~~~~a~~~~~~~-~~~y~~~~~~~----~l~~~la~~~g~~~-------~~~~~~gt~a~~~~~~~~~~~---- 76 (347)
T 1jg8_A 13 VTKPTEEMRKAMAQAEVG-DDVYGEDPTIN----ELERLAAETFGKEA-------ALFVPSGTMGNQVSIMAHTQR---- 76 (347)
T ss_dssp GCCCCHHHHHHHHTCCCC-CGGGTCCHHHH----HHHHHHHHHHTCSE-------EEEESCHHHHHHHHHHHHCCT----
T ss_pred CCCCCHHHHHHHhcCCCC-CcccCCChHHH----HHHHHHHHHhCCce-------EEEecCcHHHHHHHHHHhcCC----
Confidence 345567788877654321 11233344444 44566888888863 688999999999888776432
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHH---HHHhhCCeeEEEEecCCccccCHHHHHHHHhh------CceEEEEecCCCcc
Q 018437 145 RKEQGKPYDKPNIVTGANVQVCWEK---FARYFEVELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLT 215 (356)
Q Consensus 145 ~~~~g~~~~~~~vi~s~~~h~s~~~---~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~t 215 (356)
+++|+++.++|.+... .+...|++++.+ .++ ++.+|+++|++++++ ++++|++++++|||
T Consensus 77 ---------gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt 145 (347)
T 1jg8_A 77 ---------GDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PGK-NGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRS 145 (347)
T ss_dssp ---------TCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEE-TTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTT
T ss_pred ---------CCEEEEcCcchhhhccccchhhccCeEEEEe-cCC-CCccCHHHHHHHhccccccccCceEEEEecccccc
Confidence 5799999999977543 567789998888 544 478999999999975 68999999999999
Q ss_pred -cccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcC
Q 018437 216 -GEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG 284 (356)
Q Consensus 216 -G~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g 284 (356)
|.+.| +++|.++|+++ |+++|+|++|..+...+. +.....+ ..++|.+++++||++++|.|
T Consensus 146 ~G~~~~~~~l~~i~~~a~~~------~~~li~D~a~~~~~~~~~-~~~~~~~-~~~~d~~~~s~sK~l~~~~G 210 (347)
T 1jg8_A 146 GGRVVPLENIKEICTIAKEH------GINVHIDGARIFNASIAS-GVPVKEY-AGYADSVMFCLSKGLCAPVG 210 (347)
T ss_dssp TSBCCCHHHHHHHHHHHHHH------TCEEEEEETTHHHHHHHH-CCCHHHH-HHTCSEEEEESSSTTCCSSC
T ss_pred CCccCcHHHHHHHHHHHHHC------CCEEEeehhhhhcchhhc-CCChHHh-cccccEEEEecccccCCCce
Confidence 99865 57889999999 999999998743211111 1101111 13578889999999877754
No 135
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.80 E-value=5.4e-19 Score=169.09 Aligned_cols=191 Identities=14% Similarity=-0.020 Sum_probs=142.1
Q ss_pred ChHHHHHHHHHHhccc---CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHH
Q 018437 68 MEPECDKLVMASINKN---YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~---~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~ 144 (356)
+++.+.+++.+.+... ...|...++..++++. +++++|+++ ..+++|+|+++++..++.++.++
T Consensus 48 ~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~----la~~~g~~~-----~~v~~~~g~~~al~~~~~~~~~~---- 114 (397)
T 2zyj_A 48 PKEEAAEAAARILREKGEVALQYSPTEGYAPLRAF----VAEWIGVRP-----EEVLITTGSQQALDLVGKVFLDE---- 114 (397)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHH----HHHHHTSCG-----GGEEEESHHHHHHHHHHHHHCCT----
T ss_pred CHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHH----HHHHhCCCh-----hhEEEeccHHHHHHHHHHHhCCC----
Confidence 4577888887766532 1233333455555555 666667654 34899999999999998887432
Q ss_pred HHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh-CceEE-EEecCCCcccccCCH-
Q 018437 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICV-AAILGSTLTGEFEDV- 221 (356)
Q Consensus 145 ~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v-~~~~~~~~tG~~~~i- 221 (356)
+++|+++.++|..+...++..|++++.+|.+++ + +|+++|++++++ ++++| ++++++||||.+.|.
T Consensus 115 ---------gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~-~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~ 183 (397)
T 2zyj_A 115 ---------GSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEE-G-PDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLP 183 (397)
T ss_dssp ---------TCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT-E-ECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHH
T ss_pred ---------CCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCC-C-CCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHH
Confidence 478999999999999999999999999999864 4 999999999987 78887 578999999999765
Q ss_pred --HHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-C--C---CceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 222 --KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-L--P---LVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 222 --~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~--~---~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
++|.++|+++ |+++++|++|+.+... ......+. . . ....+..++||+++...++|+++.+
T Consensus 184 ~l~~l~~~~~~~------~~~li~De~~~~~~~~---g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~ 252 (397)
T 2zyj_A 184 ARKRLLQMVMER------GLVVVEDDAYRELYFG---EARLPSLFELAREAGYPGVIYLGSFSKVLSPGLRVAFAVAH 252 (397)
T ss_dssp HHHHHHHHHHHH------TCCEEEECTTTTCBCS---SCCCCCHHHHHHHHTCCCEEEEEESTTTTCGGGCCEEEECC
T ss_pred HHHHHHHHHHHc------CCEEEEeCCcccccCC---CCCCCchhhhCcccCCCeEEEEecccccccccceeEEEecC
Confidence 4899999999 9999999999875531 11111211 1 1 2236677899998733578999875
No 136
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.79 E-value=1.1e-18 Score=167.96 Aligned_cols=247 Identities=11% Similarity=-0.004 Sum_probs=151.9
Q ss_pred CChHHHHHHHHHHhcccC--CCcc--cCc---chHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNY--VDMD--EYP---VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~--~~~~--~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~ 139 (356)
+.+|.+.+++.+.+.... +.+. .+. ....+++.+++++++++|.+. ..++++||++|+..++.++.+
T Consensus 43 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~------~~v~~~~Gs~a~~~al~~~~~ 116 (425)
T 3ecd_A 43 IVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFNAGH------ANVQPHSGAQANGAVMLALAK 116 (425)
T ss_dssp CCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHTCSE------EECCCSSHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhCCCC------ceeecCchHHHHHHHHHHccC
Confidence 346888898887774221 1111 111 122456566688999999875 134688999999999887743
Q ss_pred HHHHHHHhcCCCCCCCeEEecCCCcch-HHHHH--HhhCCe--eEEEEecCCccccCHHHHHHHHh-hCceEEEEecCCC
Q 018437 140 KWQQKRKEQGKPYDKPNIVTGANVQVC-WEKFA--RYFEVE--LKEVKLEEGYYVMNPVKAVELVD-ENTICVAAILGST 213 (356)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~s~~~h~s-~~~~~--~~~G~~--v~~v~~~~~~~~~d~~~L~~~i~-~~~~~v~~~~~~~ 213 (356)
+ +++|+++.++|.+ +...+ ...|.. ++.++++++++.+|+++|+++++ +++++|++++++|
T Consensus 117 ~-------------gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~ 183 (425)
T 3ecd_A 117 P-------------GDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGFSAY 183 (425)
T ss_dssp T-------------TCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEEECSCC
T ss_pred C-------------CCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhhcCCcEEEEccccC
Confidence 2 5789999999987 22222 244554 44555554458999999999997 5889999887777
Q ss_pred cccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCC
Q 018437 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 214 ~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~ 293 (356)
|...++++|.++|+++ |+++|+|++|..+... .+..... ...+|.++.++||++.+|. .|+++.+++
T Consensus 184 --~~~~~l~~i~~l~~~~------~~~li~De~~~~g~~~--~~~~~~~--~~~~di~~~s~sK~l~g~~-~g~~~~~~~ 250 (425)
T 3ecd_A 184 --PRKLDFARFRAIADSV------GAKLMVDMAHIAGVIA--AGRHANP--VEHAHVVTSTTHKTLRGPR-GGFVLTNDE 250 (425)
T ss_dssp --CSCCCHHHHHHHHHHH------TCEEEEECGGGHHHHH--TTSSCCG--GGTCSEEEEESSGGGCCCS-CEEEEESCH
T ss_pred --CCcCCHHHHHHHHHHc------CCEEEEECcChHhhhh--cccccCc--hhcCcEEEecCCcccCCCC-cEEEEeCCH
Confidence 6789999999999999 9999999996544331 1111111 2247899999999987775 488877543
Q ss_pred CCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
... ..+.. ..+.+ ..++......+++..++.....++++++.++..+++++|
T Consensus 251 ~~~-~~~~~-~~~~~-------~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l 302 (425)
T 3ecd_A 251 EIA-KKINS-AVFPG-------LQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQAL 302 (425)
T ss_dssp HHH-HHHHH-HHC------------CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHH
T ss_pred HHH-HHHHh-hhCcc-------ccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 221 11110 01111 113344444566666776666677777777777666654
No 137
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.79 E-value=1.3e-18 Score=168.11 Aligned_cols=181 Identities=11% Similarity=-0.011 Sum_probs=136.7
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH
Q 018437 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF 170 (356)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~ 170 (356)
.+..++++++.+++.+.+|.+... ....+++|+|+++++..++.+++++ +++|+++.++|..+...
T Consensus 83 ~g~~~lr~~la~~~~~~~g~~~~~-~~~~i~~~~G~~~ai~~~~~~~~~~-------------gd~Vl~~~p~y~~~~~~ 148 (428)
T 1iay_A 83 HGLPEFRKAIAKFMEKTRGGRVRF-DPERVVMAGGATGANETIIFCLADP-------------GDAFLVPSPYYPAFNRD 148 (428)
T ss_dssp TCCHHHHHHHHHHHHHHTTTCSCC-CTTSCEEEEHHHHHHHHHHHHHCCT-------------TCEEEEESSCCTTHHHH
T ss_pred CCcHHHHHHHHHHHHHhcCCCCCC-ChhhEEEccChHHHHHHHHHHhCCC-------------CCeEEEccCCCcchHHH
Confidence 357889999888888888854100 1135789999999999999887542 47899999999998775
Q ss_pred H-HhhCCeeEEEEecC-CccccCHHHHHHHHhh------CceEEEEecCCCcccccCC---HHHHHHHHHHhhhccCCCC
Q 018437 171 A-RYFEVELKEVKLEE-GYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDT 239 (356)
Q Consensus 171 ~-~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~ 239 (356)
+ ...|++++.+|.++ +++.+|+++|++++++ ++++|++++|+||||.+.| +++|.++|+++ ++
T Consensus 149 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~------~~ 222 (428)
T 1iay_A 149 LRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQH------NI 222 (428)
T ss_dssp TTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTT------TC
T ss_pred HHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHC------Ce
Confidence 5 46799999999864 2478999999999874 6888999999999999988 99999999999 99
Q ss_pred cEEEecccccccccccCCC-Cc-ccccCC------Cce--EEEEcCCcCCC-CCcCeeEEEEeCC
Q 018437 240 PIHVDAASGGFIAPFLYPD-LE-WDFRLP------LVK--SINVSGHKYGL-VYAGVGWVVWRTK 293 (356)
Q Consensus 240 ~l~vD~a~~~~~~~~~~~~-~~-~~~~~~------~~D--s~~~~~hK~l~-~P~g~g~l~~~~~ 293 (356)
++|+|++|+++... ... .. ..+... +.| .+..++||+++ ....+|+++..++
T Consensus 223 ~li~Dea~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~ 285 (428)
T 1iay_A 223 HLVCDEIYAATVFD--TPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFND 285 (428)
T ss_dssp EEEEECTTGGGCCS--SSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCH
T ss_pred EEEEeccccccccC--CCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCH
Confidence 99999999875431 110 01 111111 156 67889999875 3345799987543
No 138
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.79 E-value=7e-19 Score=169.00 Aligned_cols=245 Identities=11% Similarity=0.014 Sum_probs=154.8
Q ss_pred ChHHHHHHHHHHhcccC--CCc-----ccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHH
Q 018437 68 MEPECDKLVMASINKNY--VDM-----DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~--~~~-----~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~ 140 (356)
.+|.+.+++.+.+.... +++ ........+++.+++++++++|++.. .+++++|++++..++.++..+
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~------~v~~~sGs~a~~~a~~~~~~~ 115 (420)
T 3gbx_A 42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYA------NVQPHSGSQANFAVYTALLQP 115 (420)
T ss_dssp CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTCSEE------ECCCSSHHHHHHHHHHHHCCT
T ss_pred CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCCCCc------eeEecCcHHHHHHHHHHhcCC
Confidence 46888999887774322 111 11223356777788999999999751 233455689999988877442
Q ss_pred HHHHHHhcCCCCCCCeEEecCCCcchHH---HHHHhhCC--eeEEEEecCCccccCHHHHHHHHhh-CceEEEEecCCCc
Q 018437 141 WQQKRKEQGKPYDKPNIVTGANVQVCWE---KFARYFEV--ELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTL 214 (356)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~s~~~h~s~~---~~~~~~G~--~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~ 214 (356)
+++|+++.++|.++. ......|. .++.+++++ ++.+|+++|++++++ ++++|+++.|+++
T Consensus 116 -------------gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~v~~~~~~~~ 181 (420)
T 3gbx_A 116 -------------GDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDE-SGKIDYDEMAKLAKEHKPKMIIGGFSAYS 181 (420)
T ss_dssp -------------TCEEEEEEEC------------CHHHHSEEEEEEECT-TCSCCHHHHHHHHHHHCCSEEEECCTTCC
T ss_pred -------------CCEEEecchhhcceeccchhhhhcccceeEEeccCCc-cCCcCHHHHHHHHHhcCCeEEEEecCccC
Confidence 578999999998743 22233344 444556664 489999999999987 5899988888875
Q ss_pred ccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCC-
Q 018437 215 TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK- 293 (356)
Q Consensus 215 tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~- 293 (356)
...|+++|.++|++| |+++|+|++|+.+... ....... ...+|.++.++||++++|.| |+++.++.
T Consensus 182 --~~~~l~~l~~l~~~~------~~~li~De~~~~~~~~--~~~~~~~--~~~~di~~~s~sK~~~g~~g-g~~~~~~~~ 248 (420)
T 3gbx_A 182 --GVVDWAKMREIADSI------GAYLFVDMAHVAGLIA--AGVYPNP--VPHAHVVTTTTHKTLAGPRG-GLILAKGGD 248 (420)
T ss_dssp --SCCCHHHHHHHHHHT------TCEEEEECTTTHHHHH--TTSSCCS--TTTSSEEEEESSGGGCSCSC-EEEEESSCC
T ss_pred --CccCHHHHHHHHHHc------CCEEEEECCcchhcee--cccCCcc--cccCCEEEeecccCCCCCCc-eEEEEcCCc
Confidence 578999999999999 9999999998654431 1111111 23589999999999877876 88876541
Q ss_pred -CCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 294 -DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 294 -~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
... ..+. ...+.+ ..++.+....+++..++.....++++++.++..+++++|
T Consensus 249 ~~~~-~~~~-~~~~~~-------~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l 301 (420)
T 3gbx_A 249 EELY-KKLN-SAVFPS-------AQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAM 301 (420)
T ss_dssp HHHH-HHHH-HHHC-----------CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHH-HHhh-hhcCCC-------CCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHH
Confidence 111 1110 000110 113444444566666776666667777777776666554
No 139
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.79 E-value=6.3e-19 Score=170.89 Aligned_cols=155 Identities=17% Similarity=0.030 Sum_probs=125.9
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH----HHHh
Q 018437 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK----FARY 173 (356)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~----~~~~ 173 (356)
+++++++++++|.+. .+++++|++|+..++.++.++ +++|+++.+.|.++.. .+..
T Consensus 85 ~~le~~lA~l~g~~~-------~v~~~sG~~Ai~~al~al~~~-------------Gd~Vi~~~~~y~~~~~~~~~~~~~ 144 (430)
T 3ri6_A 85 EDLEQRLKNLTGALG-------VLALGSGMAAISTAILTLARA-------------GDSVVTTDRLFGHTLSLFQKTLPS 144 (430)
T ss_dssp HHHHHHHHHHHTCSE-------EEEESCHHHHHHHHHHHHCCT-------------TCEEEEETTCCHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEcCCCchhHHHHHHHHHHH
Confidence 355566899999864 677788899999998877442 5799999999988776 6667
Q ss_pred hCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccccccc
Q 018437 174 FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP 253 (356)
Q Consensus 174 ~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~ 253 (356)
.|++++.|+.+ |+++|++++++++++|++++|+||+|.+.|+++|.++|+++ |+++|+|++|+.+..
T Consensus 145 ~G~~~~~v~~~------d~~~l~~ai~~~t~~v~~e~p~NptG~~~dl~~i~~la~~~------g~~livD~a~~~~~~- 211 (430)
T 3ri6_A 145 FGIEVRFVDVM------DSLAVEHACDETTKLLFLETISNPQLQVADLEALSKVVHAK------GIPLVVDTTMTPPYL- 211 (430)
T ss_dssp TTCEEEEECTT------CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTT------TCCEEEECTTSCTTT-
T ss_pred cCCEEEEeCCC------CHHHHHHhhCCCCeEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEECCCccccc-
Confidence 89999988864 89999999999999999999999999999999999999999 999999999985433
Q ss_pred ccCCCCcccccCCCceEEEEcCCcCCCCC--cCeeEEEEeC
Q 018437 254 FLYPDLEWDFRLPLVKSINVSGHKYGLVY--AGVGWVVWRT 292 (356)
Q Consensus 254 ~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P--~g~g~l~~~~ 292 (356)
.. +. ..++|.++.|++|++++| .-.|+++.+.
T Consensus 212 -~~---~~---~~g~div~~S~sK~l~g~g~~~gG~vv~~~ 245 (430)
T 3ri6_A 212 -LE---AK---RLGVDIEVLSSTKFISGGGTSVGGVLIDHG 245 (430)
T ss_dssp -CC---GG---GGTCSEEEEECCCEEETTEEECCEEEEECS
T ss_pred -CC---hH---HcCCEEEEECCcccccCCCCceEEEEEECC
Confidence 11 11 237899999999998766 2446665544
No 140
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.79 E-value=1.7e-18 Score=167.18 Aligned_cols=155 Identities=15% Similarity=0.043 Sum_probs=124.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHH----Hh
Q 018437 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA----RY 173 (356)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~----~~ 173 (356)
+++++.+++++|.+. .++++||++|+..++.++.++ +++||++.+.|.+....+ +.
T Consensus 85 ~~le~~lA~l~g~~~-------~i~~ssGt~Ai~~al~~l~~~-------------Gd~Vi~~~~~y~~~~~~~~~~l~~ 144 (415)
T 2fq6_A 85 FSLQQAMCELEGGAG-------CVLFPCGAAAVANSILAFIEQ-------------GDHVLMTNTAYEPSQDFCSKILSK 144 (415)
T ss_dssp HHHHHHHHHHHTCSE-------EEEESSHHHHHHHHHHTTCCT-------------TCEEEEETTSCHHHHHHHHHTGGG
T ss_pred HHHHHHHHHHhCCCe-------EEEeCCHHHHHHHHHHHHhCC-------------CCEEEEeCCCchHHHHHHHHHHHH
Confidence 455566899999863 577789999999998865432 579999999998876544 45
Q ss_pred hCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHH--hhhccCCCCcEEEeccccccc
Q 018437 174 FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTK--KNEETGWDTPIHVDAASGGFI 251 (356)
Q Consensus 174 ~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~--~~~~~~~~~~l~vD~a~~~~~ 251 (356)
.|+++++++.+ |+++|+++++++|++|++.+++||+|.+.|+++|+++|++ + |+++|+|++|+.++
T Consensus 145 ~G~~v~~v~~~------d~~~le~ai~~~tklV~~e~~~NptG~v~dl~~I~~la~~~~~------g~~livD~a~a~~~ 212 (415)
T 2fq6_A 145 LGVTTSWFDPL------IGADIVKHLQPNTKIVFLESPGSITMEVHDVPAIVAAVRSVVP------DAIIMIDNTWAAGV 212 (415)
T ss_dssp GTCEEEEECTT------CGGGGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCT------TCEEEEECTTTTTT
T ss_pred cCcEEEEECCC------CHHHHHHhhccCCcEEEEECCCCCCCEeecHHHHHHHHHhhcC------CCEEEEECCCcccc
Confidence 68998888753 7889999999999999999999999999999999999999 9 99999999998543
Q ss_pred ccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeC
Q 018437 252 APFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRT 292 (356)
Q Consensus 252 ~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~ 292 (356)
. . .+.. .++|.++.|+||+++++.+ .|+++.++
T Consensus 213 ~--~---~p~~---~g~Div~~S~sK~lg~~g~~~~G~l~~~~ 247 (415)
T 2fq6_A 213 L--F---KALD---FGIDVSIQAATKYLVGHSDAMIGTAVCNA 247 (415)
T ss_dssp S--S---CGGG---GTCSEEEEETTTTTTCSSSCCCEEEEECT
T ss_pred c--C---Cccc---cCCeEEEEeCccccCCCCCceEEEEEeCH
Confidence 2 1 1222 3789999999999866654 68887754
No 141
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.79 E-value=2.6e-18 Score=162.27 Aligned_cols=163 Identities=15% Similarity=0.027 Sum_probs=127.9
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCC-CeEEecCCCcchHHHHHHhhCCe
Q 018437 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDK-PNIVTGANVQVCWEKFARYFEVE 177 (356)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~-~~vi~s~~~h~s~~~~~~~~G~~ 177 (356)
++++.+++++|+++ ..+++|+|+++++..++.++.++ + ++|+++.++|..+...++..|++
T Consensus 62 ~lr~~la~~~~~~~-----~~v~~~~G~~~ai~~~~~~~~~~-------------g~d~Vl~~~p~~~~~~~~~~~~g~~ 123 (356)
T 1fg7_A 62 AVIENYAQYAGVKP-----EQVLVSRGADEGIELLIRAFCEP-------------GKDAILYCPPTYGMYSVSAETIGVE 123 (356)
T ss_dssp HHHHHHHHHHTSCG-----GGEEEESHHHHHHHHHHHHHCCT-------------TTCEEEECSSSCTHHHHHHHHHTCE
T ss_pred HHHHHHHHHhCCCh-----HHEEEcCCHHHHHHHHHHHHhCC-------------CCCEEEEeCCChHHHHHHHHHcCCE
Confidence 45556888888875 34899999999999999887532 4 78999999999999999999999
Q ss_pred eEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHH--hhhccCCCCcEEEeccccccccccc
Q 018437 178 LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTK--KNEETGWDTPIHVDAASGGFIAPFL 255 (356)
Q Consensus 178 v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~--~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (356)
++.+|+++ ++.+|+++|+++++ ++++|++++|+||||.+.|.++|.++++. + ++++++|++|+.+.. .
T Consensus 124 ~~~v~~~~-~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~------~~~li~De~~~~~~~-~- 193 (356)
T 1fg7_A 124 CRTVPTLD-NWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTLLELTRG------KAIVVADEAYIEFCP-Q- 193 (356)
T ss_dssp EEECCCCT-TSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTT------TCEEEEECTTGGGSG-G-
T ss_pred EEEeeCCC-CCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCC------CCEEEEEccchhhcC-C-
Confidence 99999875 48899999999998 88999999999999999887666655554 7 999999999987541 0
Q ss_pred CCCCcccc-cCCCceEEEEcCCcCCC-CCcCeeEEEEe
Q 018437 256 YPDLEWDF-RLPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (356)
Q Consensus 256 ~~~~~~~~-~~~~~Ds~~~~~hK~l~-~P~g~g~l~~~ 291 (356)
.. ...+ ...+.+.+..+++|+++ ....+|+++.+
T Consensus 194 -~~-~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~ 229 (356)
T 1fg7_A 194 -AS-LAGWLAEYPHLAILRTLSKAFALAGLRCGFTLAN 229 (356)
T ss_dssp -GC-SGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEEC
T ss_pred -Cc-HHHHHhhCCCEEEEecchHhhcCchhhhEEEEeC
Confidence 00 1121 22245777888999874 33458999874
No 142
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.79 E-value=2.1e-18 Score=162.80 Aligned_cols=185 Identities=11% Similarity=0.036 Sum_probs=138.8
Q ss_pred CChHHHHHHHHHHhccc---CCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKN---YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~---~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (356)
++++.+.+++.+.+... ...+.. +... ++++.+++++|+++ ..+++|+||++|+..++.++.++
T Consensus 39 ~~~~~v~~a~~~~~~~~~~~~~~y~~-~~~~----~lr~~la~~~g~~~-----~~i~~t~g~~~al~~~~~~l~~~--- 105 (360)
T 3hdo_A 39 PPSPEVVKAILEELGPDGAALRIYPS-ASSQ----KLREVAGELYGFDP-----SWIIMANGSDEVLNNLIRAFAAE--- 105 (360)
T ss_dssp CCCHHHHHHHHHHHTTTCGGGGSCCC-SSCH----HHHHHHHHHHTCCG-----GGEEEESSHHHHHHHHHHHHCCT---
T ss_pred CCCHHHHHHHHHHHhcccchhhcCCC-CchH----HHHHHHHHHhCcCc-----ceEEEcCCHHHHHHHHHHHHhCC---
Confidence 34578899988887653 222221 2333 45566888888765 35899999999999999877432
Q ss_pred HHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHH
Q 018437 144 KRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKL 223 (356)
Q Consensus 144 ~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~ 223 (356)
+++|+++.++|.++...++..|++++.+|++++ +.+ +++++++ ++++|++++++||||.+.|+++
T Consensus 106 ----------gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~--~~l~~~~--~~~~v~i~~p~nptG~~~~~~~ 170 (360)
T 3hdo_A 106 ----------GEEIGYVHPSYSYYGTLAEVQGARVRTFGLTGD-FRI--AGFPERY--EGKVFFLTTPNAPLGPSFPLEY 170 (360)
T ss_dssp ----------TCEEEEESSSCTHHHHHHHHHTCEEEEECBCTT-SSB--TTCCSSB--CSSEEEEESSCTTTCCCCCHHH
T ss_pred ----------CCEEEEcCCChHHHHHHHHHCCCEEEEeeCCCC-CCH--HHHHhhc--CCCEEEEeCCCCCCCCCcCHHH
Confidence 579999999999999999999999999999764 666 5554443 3568999999999999999999
Q ss_pred HHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccc-cCCCceEEEEcCCcCCC-CCcCeeEEEE
Q 018437 224 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGL-VYAGVGWVVW 290 (356)
Q Consensus 224 I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~Ds~~~~~hK~l~-~P~g~g~l~~ 290 (356)
|.++|+++ ++++++|++|+.+.- .....+ .....+.+..+++|+++ ...++|+++.
T Consensus 171 l~~l~~~~------~~~li~De~~~~~~~-----~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~ 228 (360)
T 3hdo_A 171 IDELARRC------AGMLVLDETYAEFAE-----SNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIA 228 (360)
T ss_dssp HHHHHHHB------SSEEEEECTTGGGSS-----CCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEEC
T ss_pred HHHHHHHC------CCEEEEECChHhhCC-----cchhHHhccCCCEEEEecchHhhcCCccceeeEee
Confidence 99999999 999999999986421 111111 12244567778999974 4467888876
No 143
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.79 E-value=1.4e-18 Score=166.92 Aligned_cols=219 Identities=12% Similarity=0.020 Sum_probs=147.9
Q ss_pred CCCCcccccccC------CCChHHHHHHHHHHhcc--cCCCcccCcchHHHHHHHHHHHHHHhCC--CCCCCCCCCeEE-
Q 018437 54 GNPRLNLASFVT------TWMEPECDKLVMASINK--NYVDMDEYPVTTELQNRCVNMIAHLFNT--PVADDKTAVGVG- 122 (356)
Q Consensus 54 ~~~~~~l~~~~~------~~~~~~v~~~i~~~~~~--~~~~~~~~~~~~~le~~~~~~la~l~g~--~~~~~~~~~~~~- 122 (356)
+...++|+.+.+ .++++.+.+++.+.+.. ....|....+..++++.+.+++....|. ++ ..+++
T Consensus 29 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~-----~~v~~~ 103 (412)
T 1ajs_A 29 DPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQE-----KRVGGV 103 (412)
T ss_dssp CTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHT-----TCEEEE
T ss_pred CCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHHhcCCCCccCC-----CcEEEE
Confidence 333445555543 23457888888877622 2233444556677777766666443333 22 24788
Q ss_pred -eCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCe-eEEEEecC-CccccCHHHHHHHH
Q 018437 123 -TVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE-LKEVKLEE-GYYVMNPVKAVELV 199 (356)
Q Consensus 123 -t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~-v~~v~~~~-~~~~~d~~~L~~~i 199 (356)
|+||++|+..++..+... . +|....+++|+++.++|..+...++..|++ ++.+|+++ +++.+|+++|++++
T Consensus 104 ~t~gg~~a~~~~~~~~~~~-~-----~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l 177 (412)
T 1ajs_A 104 QSLGGTGALRIGAEFLARW-Y-----NGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDL 177 (412)
T ss_dssp EEEHHHHHHHHHHHHHHHH-S-----SSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHH
T ss_pred ECCCcHHHHHHHHHHHHHh-C-----cCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHH
Confidence 999999999987544321 0 010000168999999999999999999999 99999842 35899999999999
Q ss_pred hh---CceEEEEecCCCcccccC---CHHHHHHHHHHhhhccCCCCcEEEeccccccccccc-CCCCccc-cc-CCCceE
Q 018437 200 DE---NTICVAAILGSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL-YPDLEWD-FR-LPLVKS 270 (356)
Q Consensus 200 ~~---~~~~v~~~~~~~~tG~~~---~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~-~~~~~~~-~~-~~~~Ds 270 (356)
++ +++++++++|+||||.+. ++++|.++|+++ |+++|+|++|.++...-. ....... +. ...-+.
T Consensus 178 ~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~------~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i 251 (412)
T 1ajs_A 178 ENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRR------FLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELF 251 (412)
T ss_dssp HHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEE
T ss_pred HhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHC------CCEEEEEcccccccCCcccccchHHHHHhccCCcEE
Confidence 76 677888999999999984 467899999999 999999999887543100 0000111 11 122236
Q ss_pred EEEcCCcCCCCCcC--eeEEEE
Q 018437 271 INVSGHKYGLVYAG--VGWVVW 290 (356)
Q Consensus 271 ~~~~~hK~l~~P~g--~g~l~~ 290 (356)
+..+++|.++ +.| +|++++
T Consensus 252 ~~~s~sK~~~-~~G~riG~~~~ 272 (412)
T 1ajs_A 252 CAQSFSKNFG-LYNERVGNLTV 272 (412)
T ss_dssp EEEECTTTSC-CGGGCEEEEEE
T ss_pred EEEecccccC-CCCcceEEEEE
Confidence 6788999764 444 899988
No 144
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.79 E-value=6.5e-18 Score=160.84 Aligned_cols=201 Identities=16% Similarity=0.116 Sum_probs=145.9
Q ss_pred HHHHHHHHhhhcCC-CCccccccc-CCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCC
Q 018437 42 AYQVINDELMLDGN-PRLNLASFV-TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAV 119 (356)
Q Consensus 42 i~~~~~~~~~~~~~-~~~~l~~~~-~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~ 119 (356)
..+.+.+.+...+. +.+++.+.. ++++++.+.+++. +..+| ..+++++.+.+++++|.++. ..
T Consensus 14 ~~~~~~~~i~~~g~~~v~~~~~~~~~~~~~~~v~~a~~-----~~~~~------~~~~~~~~~~~a~~~g~~~~----~~ 78 (374)
T 2aeu_A 14 ARKIILEILNEKGRDALYDLSGLSGGFLIDEKDKALLN-----TYIGS------SYFAEKVNEYGLKHLGGDEN----DK 78 (374)
T ss_dssp HHHHHHHHHHHTCGGGCEECSSCCCCCCCCHHHHHHHT-----STTHH------HHHHHHHHHHHHHHHTCCTT----EE
T ss_pred HHHHHHHHHhccCccceeeecccCCCCCCCHHHHHHHH-----HhcCc------hHHHHHHHHHHHHHhCCCCc----ce
Confidence 34445555555565 666655543 3455677777775 11111 34667888888999998421 23
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCC---cchHHHHHHhhCCeeEEEEecCCccccCHHHHH
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANV---QVCWEKFARYFEVELKEVKLEEGYYVMNPVKAV 196 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~---h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~ 196 (356)
.++|+||++|+..++.++ + +++|+++.++ |+++...++..|++++.+ .|+++|+
T Consensus 79 ~~~~~ggt~a~~~~~~~~--~-------------gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v--------~d~~~l~ 135 (374)
T 2aeu_A 79 CVGFNRTSSAILATILAL--K-------------PKKVIHYLPELPGHPSIERSCKIVNAKYFES--------DKVGEIL 135 (374)
T ss_dssp EEEESSHHHHHHHHHHHH--C-------------CSEEEEECSSSSCCTHHHHHHHHTTCEEEEE--------SCHHHHH
T ss_pred EEEEcChHHHHHHHHHhC--C-------------CCEEEEecCCCCccHHHHHHHHHcCcEEEEe--------CCHHHHH
Confidence 789999999999999876 2 5789999985 444444777889988877 2789999
Q ss_pred HHHhhCceE-EEEecCCCccc-ccCCHHHHHHHHHHhhhccCCCCcEEEecccccccc-cccCCCCcccccCCCceEEEE
Q 018437 197 ELVDENTIC-VAAILGSTLTG-EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-PFLYPDLEWDFRLPLVKSINV 273 (356)
Q Consensus 197 ~~i~~~~~~-v~~~~~~~~tG-~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~-~~~~~~~~~~~~~~~~Ds~~~ 273 (356)
++ ++++++ |++++++||+| ...++++|.++|+++ |+++|+|++|+.+.. +.... .... .++|.++.
T Consensus 136 ~~-~~~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~------~~~li~De~~~~~~~~~~~~~-~~~~---~~~di~~~ 204 (374)
T 2aeu_A 136 NK-IDKDTLVIITGSTMDLKVIELENFKKVINTAKNK------EAIVFVDDASGARVRLLFNQP-PALK---LGADLVVT 204 (374)
T ss_dssp TT-CCTTEEEEEECBCTTSCBCCHHHHHHHHHHHHHH------TCCEEEECTTHHHHHHHTTCC-CHHH---HTCSEEEE
T ss_pred hc-CCCccEEEEEccCCCCCCCCcccHHHHHHHHHHc------CCEEEEECCcccccccccccC-Cccc---cCCcEEEe
Confidence 98 778999 99999999999 889999999999999 999999999987642 11110 0111 25689999
Q ss_pred cCCcCCCCCcCeeEEEEeC
Q 018437 274 SGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 274 ~~hK~l~~P~g~g~l~~~~ 292 (356)
++||++.+ ++.|+++.++
T Consensus 205 S~sK~l~g-~~~G~~~~~~ 222 (374)
T 2aeu_A 205 STDKLMEG-PRGGLLAGKK 222 (374)
T ss_dssp ETTSSSSS-CSCEEEEEEH
T ss_pred cCcccccC-cceEEEEECH
Confidence 99999765 4889988764
No 145
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.78 E-value=2.8e-18 Score=163.57 Aligned_cols=181 Identities=14% Similarity=0.088 Sum_probs=140.3
Q ss_pred hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHH-HHHHHHHHHh
Q 018437 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF-KRKWQQKRKE 147 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~-~~~~~~~~~~ 147 (356)
++.+.+++.+.+...... ..+.. .++++.+++++|.+. +++|+||++|+..++.++ ..+
T Consensus 19 ~~~~~~a~~~~~~~~~~~--~~~~~----~~l~~~la~~~~~~~-------~~~~~~gt~al~~~~~~~~~~~------- 78 (393)
T 1mdo_A 19 GAEELAAVKTVLDSGWIT--TGPKN----QELEAAFCRLTGNQY-------AVAVSSATAGMHIALMALGIGE------- 78 (393)
T ss_dssp CHHHHHHHHHHHHHTCCS--SSHHH----HHHHHHHHHHHCCSE-------EEEESCHHHHHHHHHHHTTCCT-------
T ss_pred CHHHHHHHHHHHhcCCcC--CChHH----HHHHHHHHHHhCCCc-------EEEecChHHHHHHHHHHcCCCC-------
Confidence 356677887777643222 22333 355566888888753 789999999999999876 321
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHH
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDL 227 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i 227 (356)
+++|+++.++|.++..+++..|++++.+|++++++.+|+++|++++++++++|+++ +++|.+.|+++|.++
T Consensus 79 ------gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~---~~~G~~~~~~~i~~l 149 (393)
T 1mdo_A 79 ------GDEVITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITPQTKAIIPV---HYAGAPADLDAIYAL 149 (393)
T ss_dssp ------TCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEECCB---CGGGCCCCHHHHHHH
T ss_pred ------CCEEEeCCCccHhHHHHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCCCceEEEEe---CCCCCcCCHHHHHHH
Confidence 47899999999999999999999999999987558899999999998888888754 589999999999999
Q ss_pred HHHhhhccCCCCcEEEecccccccccccCCCCcccccCCC-ceEEEEcCC--cCCCCCcCeeEEEEeCC
Q 018437 228 LTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPL-VKSINVSGH--KYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 228 ~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~-~Ds~~~~~h--K~l~~P~g~g~l~~~~~ 293 (356)
|+++ ++++|+|++|+.+..+ .. .. + + .|.++.|+| |++.++ ..|+++.+++
T Consensus 150 ~~~~------~~~li~D~a~~~g~~~--~~-~~--~---~~~d~~~~S~~k~K~l~~~-~~g~~~~~~~ 203 (393)
T 1mdo_A 150 GERY------GIPVIEDAAHATGTSY--KG-RH--I---GARGTAIFSFHAIKNITCA-EGGIVVTDNP 203 (393)
T ss_dssp HHHH------TCCBCEECTTCTTCEE--TT-EE--T---TSSSEEEEECCTTSSSCSS-SCEEEEESCH
T ss_pred HHHc------CCeEEEECccccCCeE--CC-ee--c---CCCCeEEEeCCCCCccccc-cceEEEeCCH
Confidence 9999 9999999999854331 11 11 1 2 799999999 998654 5677776543
No 146
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.78 E-value=1.4e-18 Score=167.40 Aligned_cols=212 Identities=12% Similarity=-0.041 Sum_probs=149.0
Q ss_pred CCcccccccC------CCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHH
Q 018437 56 PRLNLASFVT------TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEA 129 (356)
Q Consensus 56 ~~~~l~~~~~------~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a 129 (356)
..++|+.+.+ .++++.+.+++.+........|....+..++++++.+++.+..+.+. ...+++|+||++|
T Consensus 39 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~----~~~i~~t~g~~~a 114 (418)
T 3rq1_A 39 NVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEG----HIRSIATAGGTGG 114 (418)
T ss_dssp GCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSS----EEEEEEESHHHHH
T ss_pred CeEECCCCcccCCCCCccccHHHHHHHHHhcccccCCCCCCCChHHHHHHHHHHHhcccCccc----cccEEECCchHHH
Confidence 3445555543 23456778877654433333455556778888888888877766541 1248999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh----Cce-
Q 018437 130 IMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NTI- 204 (356)
Q Consensus 130 ~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~----~~~- 204 (356)
+..++.++.++ +++|+++.++|..+...++..|++++.+|++++++.+|+++|++++++ +++
T Consensus 115 l~~~~~~l~~~-------------gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 181 (418)
T 3rq1_A 115 IHHLIHNYTEP-------------GDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNV 181 (418)
T ss_dssp HHHHHHHHSCT-------------TCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHHCSEE
T ss_pred HHHHHHHhcCC-------------CCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhccCCCE
Confidence 99999877542 579999999999999999999999999999654489999999999975 666
Q ss_pred EEEEecC-CCcccccCCHHHHH---HHHH------HhhhccCCCCcEEEecccccccccccC-CCCcccccCCCce---E
Q 018437 205 CVAAILG-STLTGEFEDVKLLH---DLLT------KKNEETGWDTPIHVDAASGGFIAPFLY-PDLEWDFRLPLVK---S 270 (356)
Q Consensus 205 ~v~~~~~-~~~tG~~~~i~~I~---~i~~------~~~~~~~~~~~l~vD~a~~~~~~~~~~-~~~~~~~~~~~~D---s 270 (356)
++++++| +||||.+.|.+++. ++|+ ++ ++++++|++|.++...-.. ......+....-| .
T Consensus 182 ~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~------~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i 255 (418)
T 3rq1_A 182 VVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRN------NVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTC 255 (418)
T ss_dssp EEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSC------EEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEE
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCC------CeEEEEecccccccCChHHHHHHHHHHHhcCCCceEE
Confidence 7888889 99999997765555 5555 77 9999999999765431000 0000011101112 5
Q ss_pred EEEcCCcCCC-CCcCeeEEEE
Q 018437 271 INVSGHKYGL-VYAGVGWVVW 290 (356)
Q Consensus 271 ~~~~~hK~l~-~P~g~g~l~~ 290 (356)
+..+++|.++ ....+|+++.
T Consensus 256 ~~~S~sK~~~~~G~r~G~~~~ 276 (418)
T 3rq1_A 256 VCYSLSKGFTMYGQRVGAMIG 276 (418)
T ss_dssp EEEESTTTTTCCSSCCEEEEE
T ss_pred EEEeCCCCCcCcCCcceEEEE
Confidence 5568999875 4467898876
No 147
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.78 E-value=1.3e-17 Score=161.13 Aligned_cols=182 Identities=13% Similarity=-0.037 Sum_probs=140.2
Q ss_pred cccCcchHHHHHHHHHHHHHHhCCCCCCC----CCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCC
Q 018437 87 MDEYPVTTELQNRCVNMIAHLFNTPVADD----KTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN 162 (356)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g~~~~~~----~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~ 162 (356)
|....+..++++++.+++++.+|.+.++. ....+++|+|+++++..++.++.++ +++|+++.+
T Consensus 74 Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~-------------gd~Vlv~~p 140 (425)
T 2r2n_A 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINP-------------GDNVLLDEP 140 (425)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCT-------------TCEEEEESS
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCC-------------CCEEEEeCC
Confidence 44456778899999999999999874100 0125899999999999999887542 578999999
Q ss_pred CcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHh------------hCceEEEE-ecCCCcccccCCHH---HHHH
Q 018437 163 VQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD------------ENTICVAA-ILGSTLTGEFEDVK---LLHD 226 (356)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~------------~~~~~v~~-~~~~~~tG~~~~i~---~I~~ 226 (356)
+|..+...++..|++++.+|++++ .+|+++|+++++ +++++|++ .+++||||.+.+.+ +|.+
T Consensus 141 ~y~~~~~~~~~~g~~~~~v~~~~~--~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~ 218 (425)
T 2r2n_A 141 AYSGTLQSLHPLGCNIINVASDES--GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYE 218 (425)
T ss_dssp CCHHHHHHHGGGTCEEEEECEETT--EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHH
T ss_pred CcHHHHHHHHHcCCEEEEeCcCCC--CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHH
Confidence 999999999999999999999764 499999999997 35777766 68999999997755 9999
Q ss_pred HHHHhhhccCCCCcEEEecccccccccccCCCCc---ccccCCCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 227 LLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE---WDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 227 i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~---~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
+|+++ ++++++|++|+.+... +... ..+...+.+.+..+++|+++....+|+++..+
T Consensus 219 ~a~~~------~~~li~De~~~~~~~~---g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~ 278 (425)
T 2r2n_A 219 LARKY------DFLIIEDDPYYFLQFN---KFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPK 278 (425)
T ss_dssp HHHHT------TCEEEEECTTGGGBSS---SSCCCCTGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEH
T ss_pred HHHHc------CCEEEEECCcccccCC---CCCCCCccccCCCCCEEEEccchhhccCccceEEEecCH
Confidence 99999 9999999999875431 1111 12222234566778999986334589998864
No 148
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.78 E-value=4.1e-18 Score=165.38 Aligned_cols=212 Identities=15% Similarity=0.082 Sum_probs=149.5
Q ss_pred CCc-ccccccCCCCh---HHHHHHHHHHhccc------C------CCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCC
Q 018437 56 PRL-NLASFVTTWME---PECDKLVMASINKN------Y------VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAV 119 (356)
Q Consensus 56 ~~~-~l~~~~~~~~~---~~v~~~i~~~~~~~------~------~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~ 119 (356)
..+ +|+.+.|..++ +.+.+++.+.+..+ . ..|....+..++++++.+++.+.+|++.+. ..
T Consensus 32 ~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~---~~ 108 (444)
T 3if2_A 32 QPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTS---EN 108 (444)
T ss_dssp SCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCG---GG
T ss_pred hhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCH---HH
Confidence 335 66666665543 23455555544330 1 234445567899999999998888876422 45
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCC--------------eEEec-CCCcchHHHHH------HhhCCee
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKP--------------NIVTG-ANVQVCWEKFA------RYFEVEL 178 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~--------------~vi~s-~~~h~s~~~~~------~~~G~~v 178 (356)
+++|+||++|+.+++.++..+ ++ +|+++ .++|..+...+ ...|..+
T Consensus 109 i~~t~G~t~al~~~~~~l~~~-------------gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~ 175 (444)
T 3if2_A 109 IALTNGSQNAFFYLFNLFGGA-------------FVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHI 175 (444)
T ss_dssp EEEESSHHHHHHHHHHHSSEE-------------EECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEE
T ss_pred EEEecCcHHHHHHHHHHHhCC-------------CccccccccccccccceEEEeCCCCccchhhcccccchhhccCceE
Confidence 899999999999999887432 12 57776 88888776643 3346777
Q ss_pred EEEEecCC----ccccCHHHHHHH---HhhCceEEEEecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccc
Q 018437 179 KEVKLEEG----YYVMNPVKAVEL---VDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASG 248 (356)
Q Consensus 179 ~~v~~~~~----~~~~d~~~L~~~---i~~~~~~v~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~ 248 (356)
+.++++++ ++.+|+++|+++ +.+++++|++++|+||||.+.| +++|.++|+++ ++++|+|++|+
T Consensus 176 ~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~------~~~li~De~~~ 249 (444)
T 3if2_A 176 DEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRY------DIPLIIDNAYG 249 (444)
T ss_dssp EEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT------TCCEEEECTTC
T ss_pred EecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHC------CCEEEEECCCC
Confidence 78887752 258999999998 6778999999999999999988 88899999999 99999999998
Q ss_pred cccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 249 GFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
.++....... ......+.+.+..++||++..+.++|+++..
T Consensus 250 ~~~~~~~~~~--~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~ 290 (444)
T 3if2_A 250 MPFPNIIYSD--AHLNWDNNTILCFSLSKIGLPGMRTGIIVAD 290 (444)
T ss_dssp TTTTCCBCSC--CCCCCCTTEEEEEESTTTTCGGGCCEEEECC
T ss_pred Cccccccccc--ccccCCCCEEEEechhhccCCCCceEEEEEC
Confidence 5332111010 1111245678888999986666788887653
No 149
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.78 E-value=5.6e-18 Score=162.85 Aligned_cols=198 Identities=13% Similarity=0.040 Sum_probs=143.4
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
+++.+.+++.+........|....+..++++++.+++.+..+.+. ...+++|+||++|+..++.++.++
T Consensus 56 ~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~----~~~i~~t~g~~~al~~~~~~~~~~------- 124 (413)
T 3t18_A 56 ALPSVYDRLDEMDRSHIASYAPIEGEKDYRKIVIDTLFGPYKPEG----YISAIATPGGTGAIRSAIFSYLDE------- 124 (413)
T ss_dssp CCHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSS----EEEEEEESHHHHHHHHHHHHHCCS-------
T ss_pred ChHHHHHHHHhcCcccccCcCCCCCCHHHHHHHHHHHhcccCccc----cCcEEEcCccHHHHHHHHHHhcCC-------
Confidence 456778887654332223444455778888888888877665431 125899999999999999877542
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh----Cce-EEEEecC-CCcccccCCH
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NTI-CVAAILG-STLTGEFEDV 221 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~----~~~-~v~~~~~-~~~tG~~~~i 221 (356)
+++|+++.++|..+...++..|++++.+|++++++.+|+++|++++++ +++ ++++++| +||||.+.|.
T Consensus 125 ------gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~ 198 (413)
T 3t18_A 125 ------GDPLICHDYYWAPYRKICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSD 198 (413)
T ss_dssp ------SCEEEEESSCCTHHHHHHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCH
T ss_pred ------CCEEEECCCCcccHHHHHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCH
Confidence 579999999999999999999999999999543489999999999976 676 7888889 9999999876
Q ss_pred HHHH---HHHH------HhhhccCCCCcEEEecccccccccccCCCC-cccccCC--Cce---EEEEcCCcCCC-CCcCe
Q 018437 222 KLLH---DLLT------KKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWDFRLP--LVK---SINVSGHKYGL-VYAGV 285 (356)
Q Consensus 222 ~~I~---~i~~------~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~--~~D---s~~~~~hK~l~-~P~g~ 285 (356)
+++. ++|+ ++ ++++++|++|.++... .... .+..... .-+ .+..+++|.++ ....+
T Consensus 199 ~~l~~l~~~~~~~~~~~~~------~~~li~De~y~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~ri 270 (413)
T 3t18_A 199 EEWDEVITFLKEKAEDKDK------KITLIVDVAYLEFAGD--GDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRS 270 (413)
T ss_dssp HHHHHHHHHHHHHTTSTTC------EEEEEEECTTGGGSSS--SSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCC
T ss_pred HHHHHHHHHHHHHhhccCC------cEEEEEecccccccCC--hhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCc
Confidence 6555 5555 77 9999999999875531 1110 1100011 112 45568999875 44568
Q ss_pred eEEEE
Q 018437 286 GWVVW 290 (356)
Q Consensus 286 g~l~~ 290 (356)
|+++.
T Consensus 271 G~~~~ 275 (413)
T 3t18_A 271 GAAVG 275 (413)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99886
No 150
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.78 E-value=6.4e-18 Score=164.66 Aligned_cols=246 Identities=9% Similarity=-0.060 Sum_probs=159.5
Q ss_pred CChHHHHHHHHHHhcccCC--Ccc-----cCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYV--DMD-----EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~--~~~-----~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~ 139 (356)
+.+|.+.+++.+.+..... ++. ..+....+++..++++++++|++. ..+++++|++|+..++.++++
T Consensus 56 ~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~~------~~v~~~sGs~a~~~a~~~~~~ 129 (447)
T 3h7f_A 56 FVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAEF------ANVQPHSGAQANAAVLHALMS 129 (447)
T ss_dssp CCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSE------EECCCSSHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCCCc------eEEEeCCHHHHHHHHHHHhcC
Confidence 4468888988777642211 111 112233445444499999999974 133378889999999888754
Q ss_pred HHHHHHHhcCCCCCCCeEEecCCCcch-HHH--HHHhh--CCeeEEEEecCCccccCHHHHHHHHh-hCceEEEEecCCC
Q 018437 140 KWQQKRKEQGKPYDKPNIVTGANVQVC-WEK--FARYF--EVELKEVKLEEGYYVMNPVKAVELVD-ENTICVAAILGST 213 (356)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~s~~~h~s-~~~--~~~~~--G~~v~~v~~~~~~~~~d~~~L~~~i~-~~~~~v~~~~~~~ 213 (356)
+ +++|+++.++|.+ +.. ..... +..++.++++++++.+|+++|++++. .++++|+++.++|
T Consensus 130 ~-------------Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~i~~~~~~~ 196 (447)
T 3h7f_A 130 P-------------GERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEFRPKVIIAGWSAY 196 (447)
T ss_dssp T-------------TCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHHHHHHHHHHCCSEEEEECSSC
T ss_pred C-------------CCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHHHHHHHHhcCCeEEEEcCCCC
Confidence 3 5789999998866 221 11222 34555666665558999999999996 4788888888999
Q ss_pred cccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCC
Q 018437 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 214 ~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~ 293 (356)
+++. ++++|.++|+++ |+++|+|++|..+... .... ... ..++|.++.++||++.+|.| |+++.++
T Consensus 197 ~~~~--~l~~i~~l~~~~------g~lli~Dea~~~g~~~--~g~~-~~~-~~~~di~~~s~sK~l~G~~g-G~i~~~~- 262 (447)
T 3h7f_A 197 PRVL--DFAAFRSIADEV------GAKLLVDMAHFAGLVA--AGLH-PSP-VPHADVVSTTVHKTLGGGRS-GLIVGKQ- 262 (447)
T ss_dssp CSCC--CHHHHHHHHHHH------TCEEEEECTTTHHHHH--TTSS-CCS-TTTCSEEEEESSGGGCCCSC-EEEEECG-
T ss_pred CCcc--CHHHHHHHHHHc------CCEEEEECCchhhhhc--CCCC-CCC-CCCCcEEEecCCcCCCCCCe-EEEEECH-
Confidence 8776 999999999999 9999999997543321 1111 111 24689999999999887877 8887654
Q ss_pred CCCccccccccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
+.. +.+.. ....+ ..++......+++.+++.....++++++.++..+++++|
T Consensus 263 ~~~-~~l~~-~~~~~-------~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l 314 (447)
T 3h7f_A 263 QYA-KAINS-AVFPG-------QQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARII 314 (447)
T ss_dssp GGH-HHHHH-HHTTT-------TCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHH
T ss_pred HHH-HHHhh-hcCCc-------ccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence 221 11111 00111 113333444566666677665656666766666666554
No 151
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.78 E-value=4.7e-18 Score=162.63 Aligned_cols=156 Identities=17% Similarity=0.080 Sum_probs=128.6
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH----HH
Q 018437 97 QNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF----AR 172 (356)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~----~~ 172 (356)
..++++.+++++|.+. .+++++|++|+..++.++..+ +++|+++.++|.++... ++
T Consensus 61 ~~~l~~~la~~~g~~~-------~i~~~sG~~ai~~~~~~~~~~-------------gd~vl~~~~~y~~~~~~~~~~~~ 120 (389)
T 3acz_A 61 VEQFEEMVCSIEGAAG-------SAAFGSGMGAISSSTLAFLQK-------------GDHLIAGDTLYGCTVSLFTHWLP 120 (389)
T ss_dssp HHHHHHHHHHHHTCSE-------EEEESSHHHHHHHHHTTTCCT-------------TCEEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCe-------EEEeCCHHHHHHHHHHHHhCC-------------CCEEEEeCCCchHHHHHHHHHHH
Confidence 4456677999998863 677888999999988766332 57899999999986655 56
Q ss_pred hhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccc
Q 018437 173 YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA 252 (356)
Q Consensus 173 ~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~ 252 (356)
..|++++.+|. .|+++|++++++++++|++++++||+|.+.|+++|.++|+++ |+++|+|++|+.+..
T Consensus 121 ~~g~~~~~v~~------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~------~~~livD~~~~~~~~ 188 (389)
T 3acz_A 121 RFGIEVDLIDT------SDVEKVKAAWKPNTKMVYLESPANPTCKVSDIKGIAVVCHER------GARLVVDATFTSPCF 188 (389)
T ss_dssp HTTCEEEEECT------TCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHH------TCEEEEECTTTCTTT
T ss_pred HcCCEEEEECC------CCHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEECCCccccc
Confidence 78999988876 378999999999999999999999999999999999999999 999999999986543
Q ss_pred cccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeC
Q 018437 253 PFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRT 292 (356)
Q Consensus 253 ~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~ 292 (356)
. .+.+ .++|.++.|+||++++|.+ .|+++.++
T Consensus 189 --~---~~~~---~~~di~~~S~sK~~~~~~~~~~G~v~~~~ 222 (389)
T 3acz_A 189 --L---KPLE---LGADIALHSVSKYINGHGDVIGGVSSAKT 222 (389)
T ss_dssp --C---CGGG---TTCSEEEEETTTTTTCSSCCCCEEEEESS
T ss_pred --c---Cccc---cCCeEEEECChhhccCCCCceeEEEEECc
Confidence 1 1222 3689999999999988877 69998764
No 152
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.77 E-value=8.9e-18 Score=163.02 Aligned_cols=160 Identities=12% Similarity=0.000 Sum_probs=121.3
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
...+.+.+++.+.+.... +...+.. .++++.+++++|.+. .+++++||+|+..++.++...+..+
T Consensus 40 ~~~~~~~~a~~~~~~~~~--~~~~~~~----~~l~~~la~~~g~~~-------~i~~~sGt~a~~~al~~l~~~~~~~-- 104 (437)
T 3bb8_A 40 VIGTKELQLMVEASLDGW--LTTGRFN----DAFEKKLGEYLGVPY-------VLTTTSGSSANLLALTALTSPKLGV-- 104 (437)
T ss_dssp CCCHHHHHHHHHHHHHCC--CBSCHHH----HHHHHHHHHHHTCSE-------EEEESCHHHHHHHHHHHTTCGGGGG--
T ss_pred CCCHHHHHHHHHHHHcCC--cCCChHH----HHHHHHHHHHHCCCc-------EEEeCCHHHHHHHHHHHhhhccccc--
Confidence 344677777777765422 2233333 355566888898863 7899999999999988762100000
Q ss_pred hcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHH
Q 018437 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHD 226 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~ 226 (356)
. .-..+++|+++.++|.++...+...|++++.+|++++++.+|+++|++++++++++|++++ ++|.+.|+++|.+
T Consensus 105 -~-~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~~~~i~~ 179 (437)
T 3bb8_A 105 -R-ALKPGDEVITVAAGFPTTVNPTIQNGLIPVFVDVDIPTYNVNASLIEAAVSDKTKAIMIAH---TLGNLFDLAEVRR 179 (437)
T ss_dssp -G-SCCTTCEEEECSSSCHHHHHHHHHTTCEEEECCEETTTTEECGGGHHHHCCTTEEEEEEEC---GGGCCCCHHHHHH
T ss_pred -c-cCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEeccCccCCcCHHHHHHhcCCCCeEEEEeC---CCCChhcHHHHHH
Confidence 0 0012468999999999999999999999999999864589999999999988899888875 4577899999999
Q ss_pred HHHHhhhccCCCCcEEEecccccccc
Q 018437 227 LLTKKNEETGWDTPIHVDAASGGFIA 252 (356)
Q Consensus 227 i~~~~~~~~~~~~~l~vD~a~~~~~~ 252 (356)
+|+++ ++++|+|++|+.+..
T Consensus 180 l~~~~------~~~li~D~a~~~g~~ 199 (437)
T 3bb8_A 180 VADKY------NLWLIEDCCDALGST 199 (437)
T ss_dssp HHHHH------TCEEEEECTTCTTCE
T ss_pred HHHHc------CCEEEEECccccCce
Confidence 99999 999999999985444
No 153
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.77 E-value=3.4e-18 Score=165.31 Aligned_cols=161 Identities=20% Similarity=0.102 Sum_probs=128.8
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEE---eCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecC-CCcchHH----
Q 018437 97 QNRCVNMIAHLFNTPVADDKTAVGVG---TVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA-NVQVCWE---- 168 (356)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~---t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~-~~h~s~~---- 168 (356)
.+++.+.+++++|.+. .++ +++|++||..++.++.++ +++|+++. +.|..+.
T Consensus 75 ~~~Le~~lA~l~g~e~-------alv~p~~~sGt~Ai~~al~all~p-------------GD~Vl~~~~~~y~~~~~~~g 134 (427)
T 3i16_A 75 RDSLDAVYARVFNTES-------ALVRPHFVNGTHALGAALFGNLRP-------------GNTMLSVCGEPYDTLHDVIG 134 (427)
T ss_dssp HHHHHHHHHHHHTCSE-------EEEETTCCSHHHHHHHHHHHHCCT-------------TCEEEESSSSCCGGGHHHHT
T ss_pred HHHHHHHHHHHhCCcc-------eEEeCCCccHHHHHHHHHHHHhCC-------------CCEEEEeCCCccHHHHHHHh
Confidence 3345566999999975 355 889999999998877543 57899998 8887665
Q ss_pred -------HHHHhhCCeeEEEEecCCccccCHHHHHHHHh--hCceEEEEec----CCCcccccCCHHHHHHHHHH--hhh
Q 018437 169 -------KFARYFEVELKEVKLEEGYYVMNPVKAVELVD--ENTICVAAIL----GSTLTGEFEDVKLLHDLLTK--KNE 233 (356)
Q Consensus 169 -------~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~--~~~~~v~~~~----~~~~tG~~~~i~~I~~i~~~--~~~ 233 (356)
..++..|++++.+|++++ +.+|+++|+++++ +++++|++++ |+||+|.+.|+++|.++|++ +
T Consensus 135 ~~~~~~~~~l~~~G~~~~~v~~~~~-g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~-- 211 (427)
T 3i16_A 135 ITENSNMGSLKEFGINYKQVDLKED-GKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRK-- 211 (427)
T ss_dssp CSCCCSSCCTGGGTCEEEECCCCTT-SSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCT--
T ss_pred ccccchHHHHHHcCCEEEEecCccC-CCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCC--
Confidence 334567999999999775 8999999999998 7899999999 99999999999999999999 8
Q ss_pred ccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCC--cCeeEEEEe
Q 018437 234 ETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY--AGVGWVVWR 291 (356)
Q Consensus 234 ~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P--~g~g~l~~~ 291 (356)
+++++||++|+.++.. ..+.. .++|.++.++||+++++ ...|+++.+
T Consensus 212 ----g~~livD~a~~~~~~~----~~p~~---~gaDiv~~S~sK~lgg~g~~~gG~i~~~ 260 (427)
T 3i16_A 212 ----DIICFVDNCYGEFMDT----KEPTD---VGADLIAGSLIKNIGGGIAPTGGYLAGT 260 (427)
T ss_dssp ----TSEEEEECTTTTTSSS----SCGGG---GTCSEEEEETTSGGGTTTCCSCEEEEEC
T ss_pred ----CCEEEEECCCcccccc----CCccc---cCCeEEEecCcccCCCCCCceEEEEEEC
Confidence 9999999999875531 11122 37899999999998662 234888765
No 154
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.77 E-value=3.4e-18 Score=164.56 Aligned_cols=161 Identities=14% Similarity=0.072 Sum_probs=129.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEE---eCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecC-CCcchHHH---
Q 018437 97 QNRCVNMIAHLFNTPVADDKTAVGVG---TVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA-NVQVCWEK--- 169 (356)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~---t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~-~~h~s~~~--- 169 (356)
.+++.+.+++++|.+. .++ +++|++|+..++.++.++ +++|+++. +.|..+..
T Consensus 61 ~~~Le~~lA~l~g~e~-------alv~p~~~sGt~Ai~~al~all~~-------------GD~Vl~~~~~~y~~~~~~~~ 120 (409)
T 3jzl_A 61 RDTLERVYATVFKTEA-------ALVRPQIISGTHAISTVLFGILRP-------------DDELLYITGQPYDTLEEIVG 120 (409)
T ss_dssp HHHHHHHHHHHHTCSE-------EEEETTSCSHHHHHHHHHHHHCCT-------------TCEEEECSSSCCTTHHHHHT
T ss_pred HHHHHHHHHHHhCCCc-------EEEECCCccHHHHHHHHHHHhcCC-------------CCEEEEeCCCCcHhHHHHHh
Confidence 3445566999999874 455 889999999998877543 57899987 88888774
Q ss_pred -------HHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEec----CCCcccccCCHHHHHHHHHH--hhhccC
Q 018437 170 -------FARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAIL----GSTLTGEFEDVKLLHDLLTK--KNEETG 236 (356)
Q Consensus 170 -------~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~----~~~~tG~~~~i~~I~~i~~~--~~~~~~ 236 (356)
.++..|++++.+|++++ +.+|+++|+++++++|++|++++ ++|++|.+.|+++|.++|++ +
T Consensus 121 ~~g~~~~~l~~~G~~~~~v~~~~~-g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~----- 194 (409)
T 3jzl_A 121 IRKQGQGSLKDFHIGYSSVPLLEN-GDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINP----- 194 (409)
T ss_dssp SSSSSSSCTGGGTCEEEECCCCTT-SCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCT-----
T ss_pred cccchhhHHHHcCCEEEEeCCCCC-CCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCC-----
Confidence 34567999999999874 89999999999999999999999 99999999999999999999 8
Q ss_pred CCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCc--CeeEEEEe
Q 018437 237 WDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA--GVGWVVWR 291 (356)
Q Consensus 237 ~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~--g~g~l~~~ 291 (356)
++++|+|++|+.++.. . .+.. .++|.++.|+||+++++. ..|+++.+
T Consensus 195 -~~~livD~a~~~~~~~---~-~p~~---~g~Div~~S~sK~lgg~~~~~GG~v~~~ 243 (409)
T 3jzl_A 195 -EVIVFVDNCYGEFVEY---Q-EPPE---VGADIIAGSLIKNPGGGLAKTGGYIAGK 243 (409)
T ss_dssp -TCEEEEECTTCTTTSS---C-CSGG---GTCSEEEEETTSGGGTTTCSSCEEEEEC
T ss_pred -CCEEEEeCCccccccc---C-Cccc---cCCeEEEECccccCCccCCceEEEEEeC
Confidence 9999999999875431 1 1122 378999999999986642 23777764
No 155
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.77 E-value=9.7e-18 Score=163.15 Aligned_cols=156 Identities=11% Similarity=-0.048 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH----H
Q 018437 96 LQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF----A 171 (356)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~----~ 171 (356)
..+++++++++++|.+. .+++++|++|+..++.++.++ +++|+++.+.|.++... +
T Consensus 115 ~~~~l~~~lA~l~g~~~-------~v~~~sG~~Ai~~al~~l~~~-------------Gd~Vi~~~~~y~~~~~~~~~~~ 174 (445)
T 1qgn_A 115 TTVVLEEKISALEGAES-------TLLMASGMCASTVMLLALVPA-------------GGHIVTTTDCYRKTRIFIETIL 174 (445)
T ss_dssp HHHHHHHHHHHHHTCSE-------EEEESCHHHHHHHHHHHHSCS-------------SCEEEEETTSCHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHhCCCc-------EEEeCCHHHHHHHHHHHHhCC-------------CCEEEEcCCCchhHHHHHHHHH
Confidence 44567777999999863 456666679999999876432 57899999999876653 5
Q ss_pred HhhCCeeEEEEecCCccccCHHHHHHHHhhCc-eEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccc
Q 018437 172 RYFEVELKEVKLEEGYYVMNPVKAVELVDENT-ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGF 250 (356)
Q Consensus 172 ~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~-~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~ 250 (356)
+..|++++.+|.+ |+++|++++++++ ++|++++++||+|.+.|+++|.++|+++ |+++|+|++|+.+
T Consensus 175 ~~~G~~v~~v~~~------d~~~l~~ai~~~tv~lV~le~p~NptG~v~dl~~I~~la~~~------g~~livD~a~~~~ 242 (445)
T 1qgn_A 175 PKMGITATVIDPA------DVGALELALNQKKVNLFFTESPTNPFLRCVDIELVSKLCHEK------GALVCIDGTFATP 242 (445)
T ss_dssp GGGTCEEEEECSS------CHHHHHHHHHHSCEEEEEEESSCTTTCCCCCHHHHHHHHHHT------TCEEEEECTTTCT
T ss_pred HHcCCEEEEeCCC------CHHHHHHHhccCCCCEEEEeCCCCCCCcccCHHHHHHHHHHc------CCEEEEECCCccc
Confidence 5679999988764 8999999999999 9999999999999999999999999999 9999999999864
Q ss_pred cccccCCCCcccccCCCceEEEEcCCcCCCCCcC---eeEEEEeC
Q 018437 251 IAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG---VGWVVWRT 292 (356)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g---~g~l~~~~ 292 (356)
.. .. +. ..++|.++.|+||+++ |.| .|+++.++
T Consensus 243 ~~--~~---~~---~~g~Div~~S~sK~~g-g~gd~~~G~l~~~~ 278 (445)
T 1qgn_A 243 LN--QK---AL---ALGADLVLHSATKFLG-GHNDVLAGCISGPL 278 (445)
T ss_dssp TT--CC---TT---TTTCSEEEECTTTTTT-CSSSCCCEEEEECH
T ss_pred cc--CC---cc---ccCCEEEEECCccccc-ccccceEEEEEECH
Confidence 33 11 11 2378999999999985 555 89888754
No 156
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.77 E-value=9.9e-18 Score=160.41 Aligned_cols=243 Identities=12% Similarity=-0.039 Sum_probs=159.1
Q ss_pred hHHHHHHHHHHhcccCCC---cccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHH
Q 018437 69 EPECDKLVMASINKNYVD---MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~---~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (356)
+|.+.+++.+.+...... +....+......++++.+++++|.+. .+++|+| +.++..++.++...
T Consensus 62 ~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~------~i~~~sG-~~a~~~~~~~l~~~----- 129 (401)
T 2bwn_A 62 HPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQKEA------ALVFSSA-YNANDATLSTLRVL----- 129 (401)
T ss_dssp CHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTCSE------EEEESCH-HHHHHHHHHHHHHH-----
T ss_pred CHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhCCCc------EEEECCc-HHHHHHHHHHHhcC-----
Confidence 467888887776542111 11111222344567777899998742 3556555 55777776654321
Q ss_pred HhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHh----hCceEEEEecCCCcccccCCH
Q 018437 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTGEFEDV 221 (356)
Q Consensus 146 ~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~----~~~~~v~~~~~~~~tG~~~~i 221 (356)
..+++|+++.++|.++...++..|++++.+|.+ |+++|+++++ +++++|++++++||||.+.|+
T Consensus 130 ------~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l 197 (401)
T 2bwn_A 130 ------FPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN------DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPI 197 (401)
T ss_dssp ------STTCEEEEETTCCHHHHHHHHHSCCCEEEECTT------CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCH
T ss_pred ------CCCCEEEECchhhHHHHHHHHHcCCeEEEEcCC------CHHHHHHHHHhhccCCceEEEEecCcCCCCCcCCH
Confidence 014689999999999999999999999998864 7888998887 578999999999999999999
Q ss_pred HHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcc-cccC-CCceEEEEcCCcCCCCCcCeeEEEEeCCCCCccc
Q 018437 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRL-PLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDE 299 (356)
Q Consensus 222 ~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~-~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~ 299 (356)
++|.++|+++ ++++|+|++|+.+.... ...... .... ...|.+..+++|.++.| | |+++.+ ++.. +.
T Consensus 198 ~~i~~l~~~~------~~~li~Dea~~~g~~~~-~g~~~~~~~~~~~~~~i~~~s~sK~~~~~-G-G~~~~~-~~~~-~~ 266 (401)
T 2bwn_A 198 KEICDIAEEF------GALTYIDEVHAVGMYGP-RGAGVAERDGLMHRIDIFNGTLAKAYGVF-G-GYIAAS-ARMV-DA 266 (401)
T ss_dssp HHHHHHHHHH------TCEEEEECTTTTTTSST-TSCCHHHHHTCGGGCSEEEEESSSTTCSC-C-EEEEEC-HHHH-HH
T ss_pred HHHHHHHHHc------CCEEEEeccccccccCC-CCceeeeccCccccCcEEEeechhhccCC-C-CEEecC-HHHH-HH
Confidence 9999999999 99999999998543210 000000 1111 24577888999998654 4 777653 2221 11
Q ss_pred ccc-ccCCCCCCCCCccccCCCChhHHHHHHHHHHHhCHHHHHHHHHHHHhccCcc
Q 018437 300 LVF-HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEEITFTFISSLKVCPFL 354 (356)
Q Consensus 300 ~~~-~~~~~~~~~~~~~~~~tr~~~~~~~~~~~l~~lg~~G~~~~~~~~~~~a~~l 354 (356)
+.. ...+... .++.+ ...+++.++++.+...|++++.++..+++++|
T Consensus 267 l~~~~~~~~~~-------~~~~~-~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 314 (401)
T 2bwn_A 267 VRSYAPGFIFS-------TSLPP-AIAAGAQASIAFLKTAEGQKLRDAQQMHAKVL 314 (401)
T ss_dssp HHHHCHHHHTS-------BCCCH-HHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHH
T ss_pred HHHhCcCceec-------CCCCH-HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 110 0011100 12333 44666778888887777777777777766655
No 157
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.77 E-value=5.1e-18 Score=163.84 Aligned_cols=157 Identities=11% Similarity=-0.023 Sum_probs=127.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHh--
Q 018437 96 LQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARY-- 173 (356)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~-- 173 (356)
..+++++++++++|.+. .++++||++|+..++.++.++ +++|+++.+.|..+...++.
T Consensus 82 ~~~~l~~~la~~~g~~~-------~~~~~sG~~Ai~~al~~l~~~-------------Gd~Vi~~~~~y~~~~~~~~~~~ 141 (414)
T 3ndn_A 82 TVSVFEERLRLIEGAPA-------AFATASGMAAVFTSLGALLGA-------------GDRLVAARSLFGSCFVVCSEIL 141 (414)
T ss_dssp HHHHHHHHHHHHHTCSE-------EEEESSHHHHHHHHHHTTCCT-------------TCEEEEESCCCHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEcCCccchHHHHHHHHH
Confidence 44566777999999753 789999999999888876432 57999999999987766644
Q ss_pred --hCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccccc
Q 018437 174 --FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFI 251 (356)
Q Consensus 174 --~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~ 251 (356)
.|++++.+|.+ |+++|++++++++++|+++.++||+|.+.|+++|.++|+++ |+++++|++|+.+.
T Consensus 142 ~~~g~~~~~v~~~------d~~~l~~ai~~~t~~v~le~p~NptG~~~~l~~i~~la~~~------g~~livDe~~~~~~ 209 (414)
T 3ndn_A 142 PRWGVQTVFVDGD------DLSQWERALSVPTQAVFFETPSNPMQSLVDIAAVTELAHAA------GAKVVLDNVFATPL 209 (414)
T ss_dssp HHTTCEEEEECTT------CHHHHHHHTSSCCSEEEEESSCTTTCCCCCHHHHHHHHHHT------TCEEEEECTTTHHH
T ss_pred HHcCcEEEEeCCC------CHHHHHHhcCCCCeEEEEECCCCCCCccccHHHHHHHHHHc------CCEEEEECCCcccc
Confidence 89999888864 78999999999999999999999999999999999999999 99999999998543
Q ss_pred ccccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeC
Q 018437 252 APFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRT 292 (356)
Q Consensus 252 ~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~ 292 (356)
. ..+ . ..++|.++.|++|+++++.. .|+++.++
T Consensus 210 ~--~~~---~---~~g~div~~S~sK~l~~~G~~~~G~vv~~~ 244 (414)
T 3ndn_A 210 L--QQG---F---PLGVDVVVYSGTKHIDGQGRVLGGAILGDR 244 (414)
T ss_dssp H--CCC---G---GGTCSEEEEETTTTTTCSSCCCCEEEEECH
T ss_pred c--CCc---h---hcCCCeEeccCCccccCCCCceEEEEEECH
Confidence 3 111 1 23689999999999854332 78887754
No 158
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.77 E-value=2.3e-18 Score=175.31 Aligned_cols=217 Identities=14% Similarity=0.075 Sum_probs=154.2
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCe
Q 018437 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE 177 (356)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~ 177 (356)
.++.+.+|+++|.+. ..++++|++.||..++.++.++ +++|+++.+.|.|+..++.+.|++
T Consensus 198 ~eaE~~lA~~fGa~~------a~~v~nGts~An~~ai~al~~p-------------GD~VLv~r~~H~S~~~~l~lsGa~ 258 (715)
T 3n75_A 198 KEAEQYIARVFNADR------SYMVTNGTSTANKIVGMYSAPA-------------GSTILIDRNCHKSLTHLMMMSDVT 258 (715)
T ss_dssp HHHHHHHHHHHTCSE------EEEESSHHHHHHHHHHHHHCCT-------------TCEEEEESSCCHHHHHHHHHSCCE
T ss_pred HHHHHHHHHHhCCCC------ceEECcHHHHHHHHHHHHhCCC-------------CCEEEECCCccHHHHHHHHHcCCE
Confidence 356667999999974 2456667689998888887553 689999999999999999999999
Q ss_pred eEEEEecCCccc----c-----CHHHHHHHHhhC--ce---EEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEE
Q 018437 178 LKEVKLEEGYYV----M-----NPVKAVELVDEN--TI---CVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (356)
Q Consensus 178 v~~v~~~~~~~~----~-----d~~~L~~~i~~~--~~---~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~v 243 (356)
+++++.+.+++. + |+++|++++++. ++ +|++++| |++|.+.|+++|.++|+++ + +++
T Consensus 259 pv~v~~~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~------~--liv 329 (715)
T 3n75_A 259 PIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVK------S--IHF 329 (715)
T ss_dssp EEEECCCBCTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCS------E--EEE
T ss_pred EEEEeccccccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcC------c--EEE
Confidence 999997643343 3 899999999853 34 7889999 8999999999999999765 3 899
Q ss_pred ecccccccccccCCCCc--ccccC-CCceEE---EEcCCcCCCCCcCeeEEEEeCCCCCccccccccCCCCCCCCCcccc
Q 018437 244 DAASGGFIAPFLYPDLE--WDFRL-PLVKSI---NVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLN 317 (356)
Q Consensus 244 D~a~~~~~~~~~~~~~~--~~~~~-~~~Ds~---~~~~hK~l~~P~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (356)
|+||+.++. +.+..+ ..+.. ..+|.+ +.|+||++.++.++|++++++. .....+.....+.. .
T Consensus 330 DEAH~~~~~--f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~-i~~~~~~~~~~~~~--------S 398 (715)
T 3n75_A 330 DSAWVPYTN--FSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD-VNEETFNEAYMMHT--------T 398 (715)
T ss_dssp ECTTCTTGG--GSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESC-CCHHHHHHHHHHTS--------C
T ss_pred ccccccccc--cCCccccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCch-hhHHHHHHHHHhhc--------C
Confidence 999987642 111111 11111 126765 8899999999989999999865 21111111111221 1
Q ss_pred CCCChhHHHHHHHHHHHhCH-HHHHHHHHHHHhccCcc
Q 018437 318 FSKGSSQIIAQYYQFIRLGF-EEITFTFISSLKVCPFL 354 (356)
Q Consensus 318 ~tr~~~~~~~~~~~l~~lg~-~G~~~~~~~~~~~a~~l 354 (356)
.|.+...++++-++++.+-. +| +++.++.++++++|
T Consensus 399 TSpsy~~~AsldaA~~~~~~~~g-~~~~~~l~~~a~~~ 435 (715)
T 3n75_A 399 TSPHYGIVASTETAAAMMKGNAG-KRLINGSIERAIKF 435 (715)
T ss_dssp SSCCHHHHHHHHHHHHHHSHHHH-HHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHhhcc-HHHHHHHHHHHHHH
Confidence 45666667788888877764 44 44666666666654
No 159
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.77 E-value=8.2e-18 Score=164.29 Aligned_cols=195 Identities=11% Similarity=0.033 Sum_probs=131.7
Q ss_pred HHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcC
Q 018437 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQG 149 (356)
Q Consensus 70 ~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g 149 (356)
+.+.+++.+.+......|...++..+ +++++++++|.+. +++|+|||+|+..++.++++.+.. .
T Consensus 55 ~~v~~a~~~~~~~~~~~y~~~~~~~~----l~~~la~~~~~~~-------v~~t~ggt~A~~~al~~~~~~~~~----~- 118 (467)
T 1ax4_A 55 NAMSDHQWAAMITGDEAYAGSRNYYD----LKDKAKELFNYDY-------IIPAHQGRGAENILFPVLLKYKQK----E- 118 (467)
T ss_dssp CCEEHHHHHHHHTCCCCSSSCHHHHH----HHHHHHHHHCCCE-------EEEESSHHHHHHHHHHHHHHHHHH----T-
T ss_pred HHHHHHHHHHHhhcccccccCccHHH----HHHHHHHHcCCCc-------EEEcCCcHHHHHHHHHHHHHhhcc----C-
Confidence 44555555554332223433344444 4556888888753 899999999999999998762210 1
Q ss_pred CCCCCCe---EEecCCCc-chHHHHHHhhCCeeEEEEecC---------CccccCHHHHHHHHhh----CceEEEEecCC
Q 018437 150 KPYDKPN---IVTGANVQ-VCWEKFARYFEVELKEVKLEE---------GYYVMNPVKAVELVDE----NTICVAAILGS 212 (356)
Q Consensus 150 ~~~~~~~---vi~s~~~h-~s~~~~~~~~G~~v~~v~~~~---------~~~~~d~~~L~~~i~~----~~~~v~~~~~~ 212 (356)
+++ |+++ ..| ..+..++...|..++.++.+. .++.+|+++|++++++ ++++|+++.++
T Consensus 119 ----Gd~~~~viv~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~ 193 (467)
T 1ax4_A 119 ----GKAKNPVFIS-NFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTC 193 (467)
T ss_dssp ----TCCSSCEEEE-SSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSB
T ss_pred ----CCccceEEEe-ccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccc
Confidence 345 7887 555 556777888899888776531 1367999999999984 68999999999
Q ss_pred Ccc-ccc---CCHHHHHHHHHHhhhccCCCCcEEEeccccc-ccc-------cccCCCCccccc---CCCceEEEEcCCc
Q 018437 213 TLT-GEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGG-FIA-------PFLYPDLEWDFR---LPLVKSINVSGHK 277 (356)
Q Consensus 213 ~~t-G~~---~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~-~~~-------~~~~~~~~~~~~---~~~~Ds~~~~~hK 277 (356)
||+ |.+ +++++|.++|++| |+++|+|+++.. +.. .+ .+....++. ...+|.++.++||
T Consensus 194 np~gG~~~~~~~l~~i~~la~~~------gi~li~De~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~s~sK 266 (467)
T 1ax4_A 194 NSAGGQPVSMSNLKEVYEIAKQH------GIFVVMDSARFCENAYFIKARDPKY-KNATIKEVIFDMYKYADALTMSAKK 266 (467)
T ss_dssp TTTTSBCCCHHHHHHHHHHHHHH------TCCEEEECTTHHHHHHHHHHHCGGG-TTCCHHHHHHHHGGGCSEEEEETTS
T ss_pred cCCCccCCChhHHHHHHHHHHHc------CCEEEEEchhhhhcchhcccccccc-CCCchhhhhhhhccccceEEEeccc
Confidence 999 776 5678999999999 999999998653 111 11 110001110 0247889999999
Q ss_pred CCCCCcCeeEEEEeCC
Q 018437 278 YGLVYAGVGWVVWRTK 293 (356)
Q Consensus 278 ~l~~P~g~g~l~~~~~ 293 (356)
+++.|.| |+++.+++
T Consensus 267 ~~g~~~G-g~~~~~d~ 281 (467)
T 1ax4_A 267 DPLLNIG-GLVAIRDN 281 (467)
T ss_dssp TTCCSSC-EEEEESSC
T ss_pred cCCCCcc-eEEEeCCH
Confidence 9877655 66665534
No 160
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.77 E-value=2e-18 Score=161.06 Aligned_cols=154 Identities=21% Similarity=0.128 Sum_probs=125.8
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHH----Hhh
Q 018437 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA----RYF 174 (356)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~----~~~ 174 (356)
++++.+++++|.+. .+++++|++|+..++.++..+ +++|+++.++|.++...+ +..
T Consensus 2 ~l~~~la~~~g~~~-------~i~~~sG~~a~~~~~~~~~~~-------------g~~v~~~~~~~~~~~~~~~~~~~~~ 61 (331)
T 1pff_A 2 ALEGKIAKLEHAEA-------CAATASGMGAIAASVWTFLKA-------------GDHLISDDCLYGCTHALFEHQLRKF 61 (331)
T ss_dssp HHHHHHHHHHTCSE-------EEEESSHHHHHHHHHHHHCCT-------------TCEEEEESCCCHHHHHHHHTHHHHT
T ss_pred hHHHHHHHHhCCCe-------EEEeCChHHHHHHHHHHhcCC-------------CCEEEEcCCCcchHHHHHHHHHHhc
Confidence 45667899999863 566667799999998876432 478999999999877665 457
Q ss_pred CCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHH-hhhccCCCCcEEEeccccccccc
Q 018437 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTK-KNEETGWDTPIHVDAASGGFIAP 253 (356)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~-~~~~~~~~~~l~vD~a~~~~~~~ 253 (356)
|++++.+|. .|+++|++++++++++|++++++||+|.+.|+++|.++|++ + ++++|+|++|+.+..+
T Consensus 62 g~~~~~~~~------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~------~~~li~D~a~~~~~~~ 129 (331)
T 1pff_A 62 GVEVDFIDM------AVPGNIEKHLKPNTRIVYFETPANPTLKVIDIEDAVKQARKQK------DILVIVDNTFASPILT 129 (331)
T ss_dssp TCEEEEECT------TSTTHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSS------SCEEEEECTTTHHHHC
T ss_pred CCEEEEeCC------CCHHHHHHhhcCCCeEEEEECCCCCcCcccCHHHHHHHHhhhc------CCEEEEECCCcccccC
Confidence 898888875 37789999999889999999999999999999999999999 9 9999999999876541
Q ss_pred ccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeC
Q 018437 254 FLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRT 292 (356)
Q Consensus 254 ~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~ 292 (356)
. +.+ .++|.++.|+||++++|.+ +|+++.++
T Consensus 130 --~---~~~---~~~d~~~~s~~K~~~~~~~r~~G~~~~~~ 162 (331)
T 1pff_A 130 --N---PLD---LGVDIVVHSATKYINGHTDVVAGLVCSRA 162 (331)
T ss_dssp --C---GGG---GTCSEEEEETTTTTSSSSSCCCEEEEECH
T ss_pred --C---hhh---cCCcEEEEECccccCCCCCceEEEEEeCc
Confidence 1 122 3689999999999988877 78988764
No 161
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.76 E-value=1.4e-17 Score=161.16 Aligned_cols=224 Identities=11% Similarity=0.007 Sum_probs=151.1
Q ss_pred HHHHHHHHHHHhhhc-CCCCcccccccCC-CChHHHHHHHHHHhcc-----cCCCcccCcchHHHHHHHHHHHHHHhCCC
Q 018437 39 KEAAYQVINDELMLD-GNPRLNLASFVTT-WMEPECDKLVMASINK-----NYVDMDEYPVTTELQNRCVNMIAHLFNTP 111 (356)
Q Consensus 39 ~~~i~~~~~~~~~~~-~~~~~~l~~~~~~-~~~~~v~~~i~~~~~~-----~~~~~~~~~~~~~le~~~~~~la~l~g~~ 111 (356)
.+++.+........+ +...++|+.+.+. +.++.+.+++.+.+.. ....|....+..++++++.+++.+.++++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~~~~ 118 (432)
T 3ei9_A 39 FPEIARRRSAHLLKYPDAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIG 118 (432)
T ss_dssp HHHHHHHHHHHHHHCTTCCCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTTTTCC
T ss_pred HHHHHHHHHhhhhcCCCCCeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHccCCCC
Confidence 444444444333332 3344566665554 3457888888777652 22234444567888888888887645555
Q ss_pred CCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCC------------eeE
Q 018437 112 VADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEV------------ELK 179 (356)
Q Consensus 112 ~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~------------~v~ 179 (356)
+ ..+++|+|+++++.. +.++.++ +++|+++.++|.++...++..|. +++
T Consensus 119 ~-----~~i~~t~G~~~al~~-l~~l~~~-------------gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 179 (432)
T 3ei9_A 119 D-----DDVFVSDGAKCDISR-LQVMFGS-------------NVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIE 179 (432)
T ss_dssp G-----GGEEEESCHHHHHHH-HHHHHCT-------------TCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCE
T ss_pred c-----ceEEECCChHHHHHH-HHHHcCC-------------CCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceE
Confidence 4 458999999999876 3444321 57899999999999999988884 688
Q ss_pred EEEecCC-ccccCHHHHHHHHhhCceEEEEecCCCcccccC---CHHHHHHHHHHhhhccCCCCcEEEeccccccccccc
Q 018437 180 EVKLEEG-YYVMNPVKAVELVDENTICVAAILGSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (356)
Q Consensus 180 ~v~~~~~-~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~---~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (356)
.+|++++ ++..|++. .+++++|++++|+||||.+- ++++|.++|+++ ++++++|++|+.+..+-
T Consensus 180 ~~~~~~~~~~~~~l~~-----~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~------~~~li~Dea~~~~~~~~- 247 (432)
T 3ei9_A 180 YMRCTPENGFFPDLST-----VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKN------GSIIVYDSAYAMYMSDD- 247 (432)
T ss_dssp EEECCGGGTTSCCGGG-----CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEECTTGGGCCSS-
T ss_pred EeccCcccCCcCChhh-----CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHc------CcEEEEccchHhhccCC-
Confidence 8998753 24555432 35788999999999999985 467778889999 99999999999765421
Q ss_pred CCCCccccc-CCCceEEEEcCCcCCC-CCcCeeEEEEeCC
Q 018437 256 YPDLEWDFR-LPLVKSINVSGHKYGL-VYAGVGWVVWRTK 293 (356)
Q Consensus 256 ~~~~~~~~~-~~~~Ds~~~~~hK~l~-~P~g~g~l~~~~~ 293 (356)
.+.....+. ....+.+..+++|+++ ....+|+++.+++
T Consensus 248 ~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~ 287 (432)
T 3ei9_A 248 NPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKK 287 (432)
T ss_dssp CCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTT
T ss_pred CCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChH
Confidence 010011111 1245677888999875 5567899887654
No 162
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.76 E-value=1.6e-17 Score=158.88 Aligned_cols=203 Identities=12% Similarity=0.002 Sum_probs=143.8
Q ss_pred HHHHHHHHHHhcc-cCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEE--eCChhHHHHHHHHHHHHHHHHHHH
Q 018437 70 PECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG--TVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 70 ~~v~~~i~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~--t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+.+++...... ....|....+..++++++.+++.+.+|.+.+. ..+++ |+||++|+.+++.+++...
T Consensus 49 ~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~---~~i~~v~t~G~~~al~~~~~~l~~~~----- 120 (401)
T 7aat_A 49 NCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKS---GRYVTVQGISGTGSLRVGANFLQRFF----- 120 (401)
T ss_dssp HHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHT---TCEEEEEEEHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCcccccc---CceEEEecCcchHHHHHHHHHHHHhc-----
Confidence 5677877766542 22334445577788888777777665643111 23655 9999999999987765320
Q ss_pred hcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHh---hCceEEEEecCCCccccc---C
Q 018437 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVD---ENTICVAAILGSTLTGEF---E 219 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~---~~~~~v~~~~~~~~tG~~---~ 219 (356)
..+++|+++.++|..+...++..|++++.+|++. +++.+|++.+++.+. +++++|++++|+||||.+ +
T Consensus 121 -----~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~ 195 (401)
T 7aat_A 121 -----KFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQE 195 (401)
T ss_dssp -----TTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHH
T ss_pred -----cCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHH
Confidence 1157899999999999999999999999999853 358999998887775 467899999999999976 4
Q ss_pred CHHHHHHHHHHhhhccCCCCcEEEecccccccccccC-CCCccc-c-cCCCceEEEEcCCcCCC-CCcCeeEEEEe
Q 018437 220 DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY-PDLEWD-F-RLPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (356)
Q Consensus 220 ~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~-~~~~~~-~-~~~~~Ds~~~~~hK~l~-~P~g~g~l~~~ 291 (356)
++++|+++|+++ ++++++|++|..+...-.. +..... + ....-..+..+++|.++ ....+|+++..
T Consensus 196 ~l~~i~~~~~~~------~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~ 265 (401)
T 7aat_A 196 QWKELASVVKKR------NLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVI 265 (401)
T ss_dssp HHHHHHHHHHHT------TCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEE
T ss_pred HHHHHHHHHHhC------CcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccccccCceEEEEEE
Confidence 578899999999 9999999999875431000 000000 0 12234556778999874 23448998863
No 163
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.62 E-value=3.7e-20 Score=177.02 Aligned_cols=204 Identities=11% Similarity=-0.029 Sum_probs=150.7
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
+++.+.+++.+.+......|... ..++++++.+++++.+|.+.+. ..+++|+||++++..++.++..+
T Consensus 45 ~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~---~~v~~~~g~~~a~~~~~~~~~~~------- 112 (392)
T 3b1d_A 45 VMPEVKQAIHDYAEQLVYGYTYA--SDELLQAVLDWEKSEHQYSFDK---EDIVFVEGVVPAISIAIQAFTKE------- 112 (392)
Confidence 34678888877765433333322 6778888888888888854321 34789999999999999887543
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-C-ccccCHHHHHHHHh-hCceEEEEecCCCcccccC---CH
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-G-YYVMNPVKAVELVD-ENTICVAAILGSTLTGEFE---DV 221 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~-~~~~d~~~L~~~i~-~~~~~v~~~~~~~~tG~~~---~i 221 (356)
+++|+++.++|..+...++..|++++.+|+++ + ++.+|+++|+++++ +++++|++++++||||.+. ++
T Consensus 113 ------gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l 186 (392)
T 3b1d_A 113 ------GEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVL 186 (392)
Confidence 46899999999999999999999999999853 2 36799999999997 6788899999999999985 48
Q ss_pred HHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccC--CCceEEEEcCCcCCC-CCcCeeEEEEeCCCC
Q 018437 222 KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL--PLVKSINVSGHKYGL-VYAGVGWVVWRTKDD 295 (356)
Q Consensus 222 ~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~--~~~Ds~~~~~hK~l~-~P~g~g~l~~~~~~~ 295 (356)
++|.++|+++ ++++++|++|+.+...--.......+.. ...+.+..+.+|+++ ....+|+++..+++.
T Consensus 187 ~~l~~~~~~~------~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 257 (392)
T 3b1d_A 187 EQIGHLCQKH------HVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTL 257 (392)
Confidence 9999999999 9999999999876542000000011111 234456677999985 556789988765433
No 164
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.76 E-value=8.2e-18 Score=161.59 Aligned_cols=229 Identities=14% Similarity=0.064 Sum_probs=150.3
Q ss_pred HHHHHHHHhhhcC-CCCcccccccCCCCh---HHHHHHHHHHhcccC-----CCcccCcchHHHHHHHHHHHHHHhCCCC
Q 018437 42 AYQVINDELMLDG-NPRLNLASFVTTWME---PECDKLVMASINKNY-----VDMDEYPVTTELQNRCVNMIAHLFNTPV 112 (356)
Q Consensus 42 i~~~~~~~~~~~~-~~~~~l~~~~~~~~~---~~v~~~i~~~~~~~~-----~~~~~~~~~~~le~~~~~~la~l~g~~~ 112 (356)
+.+.+.+...... ...++|+.+.+...+ +.+.+++.+.+.+.. ..|....+..++++++.+++.+.+|++.
T Consensus 17 ~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~ 96 (417)
T 3g7q_A 17 ITRLMEDLNDGLRTPGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDI 96 (417)
T ss_dssp HHHHHHHHHC-----CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHhhccCCCceEecCcCCCCCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCC
Confidence 4444444443322 233567776665533 345666655543221 2455556788999999999988888764
Q ss_pred CCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEec-CCCcchHHHHHHh----hCCeeEEEEecCC-
Q 018437 113 ADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTG-ANVQVCWEKFARY----FEVELKEVKLEEG- 186 (356)
Q Consensus 113 ~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s-~~~h~s~~~~~~~----~G~~v~~v~~~~~- 186 (356)
+. ..+++|+|+++|+.+++.++..+ |.+.+..+|+++ .++|..+...+.. .+..+..++++.+
T Consensus 97 ~~---~~i~~t~G~t~al~~~~~~l~~~--------gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (417)
T 3g7q_A 97 EP---QNIALTNGSQSAFFYLFNLFAGR--------RADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQ 165 (417)
T ss_dssp CG---GGEEEESCHHHHHHHHHHHHSBC------------CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGE
T ss_pred Cc---ccEEEeCCcHHHHHHHHHHHcCC--------CccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCcc
Confidence 22 45899999999999999887542 100111278888 8999888776532 2334444444432
Q ss_pred -ccccCHHHHHHHHhhCceEEEEecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccc
Q 018437 187 -YYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD 262 (356)
Q Consensus 187 -~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~ 262 (356)
++.+|+++|+ +++++++|++++|+||||.+.| +++|.++|+++ ++++|+|++|+.+...........
T Consensus 166 ~~~~~d~~~l~--~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~------~~~li~De~~~~~~~~~~~~~~~~- 236 (417)
T 3g7q_A 166 FKYHVDFEHLH--IGEETGMICVSRPTNPTGNVITDEELMKLDRLANQH------NIPLVIDNAYGVPFPGIIFSEARP- 236 (417)
T ss_dssp EEEECCGGGCC--CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT------TCCEEEECTTCTTTTCCBCSCCCC-
T ss_pred cccccCHHHhc--cccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHc------CCEEEEeCCCcccccccccccccc-
Confidence 4689999998 6778999999999999999977 88999999999 999999999985332111011111
Q ss_pred ccCCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 263 FRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 263 ~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
...+.+.+..+++|++....++|+++..
T Consensus 237 -~~~~~~i~~~s~sK~~~~G~r~G~~~~~ 264 (417)
T 3g7q_A 237 -LWNPNIILCMSLSKLGLPGSRCGIIIAN 264 (417)
T ss_dssp -CCCTTEEEEEESGGGTCTTSCCEEEECC
T ss_pred -CCCCCEEEEEechhccCCCcceEEEEeC
Confidence 1235677788899986666778988753
No 165
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.76 E-value=1.8e-18 Score=167.23 Aligned_cols=193 Identities=11% Similarity=0.028 Sum_probs=143.9
Q ss_pred HHHHHHHhcc-cCCCcccCcchHHHHHHHHHHHHHHh-CCCCCCCCCCC---eEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 73 DKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLF-NTPVADDKTAV---GVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 73 ~~~i~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~-g~~~~~~~~~~---~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+++.+.+.. ....|....+..++++++.+++.+.. ++++ .. +++|+||++|+..++.++.++
T Consensus 69 ~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~-----~~~~~i~~t~g~~~al~~~~~~l~~~------- 136 (430)
T 2x5f_A 69 LDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSI-----DNMSRPIVTNALTHGLSLVGDLFVNQ------- 136 (430)
T ss_dssp HHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHCTTCCG-----GGBCCCEEESHHHHHHHHHHHHHCCT-------
T ss_pred HHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccCcccCC-----CccceEEEcCCchHHHHHHHHHHhCC-------
Confidence 5555444433 23344444467788888777776653 3432 34 789999999999999887532
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHh-hCCeeEEEEecCCccccCHHHHHHHHhh---CceEEEEecCCCcccccCC---
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARY-FEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFED--- 220 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~-~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~~~--- 220 (356)
+++|+++.++|..+...++. .|++++.+|++++++.+|+++|++++++ ++++|++++|+||||.+.|
T Consensus 137 ------gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~ 210 (430)
T 2x5f_A 137 ------DDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKE 210 (430)
T ss_dssp ------TCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHH
T ss_pred ------CCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcCCHHH
Confidence 57899999999999999999 9999999999763378999999999987 7899999999999999987
Q ss_pred HHHHHHHHHH-----hhhccCCCCcEEEecccccccccccCCCCc-c-ccc-CCCc---eEEEEcCCcCCCCC-cCeeEE
Q 018437 221 VKLLHDLLTK-----KNEETGWDTPIHVDAASGGFIAPFLYPDLE-W-DFR-LPLV---KSINVSGHKYGLVY-AGVGWV 288 (356)
Q Consensus 221 i~~I~~i~~~-----~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~-~~~-~~~~---Ds~~~~~hK~l~~P-~g~g~l 288 (356)
+++|.++|++ + ++++++|++|+.+...- .+... . .+. .... +.+..++||+++.| ..+|++
T Consensus 211 l~~i~~~~~~~~~~~~------~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~ 283 (430)
T 2x5f_A 211 VTTIVEAIKALANKGT------KVIAVVDDAYYGLFYED-VYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFM 283 (430)
T ss_dssp HHHHHHHHHHHHHTTC------EEEEEEECTTTTCBCSS-SCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEE
T ss_pred HHHHHHHHHhhhhccC------CEEEEEehhcccccCCc-ccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEE
Confidence 8899999999 9 99999999998765410 00011 1 222 1233 56677899988533 457999
Q ss_pred EE
Q 018437 289 VW 290 (356)
Q Consensus 289 ~~ 290 (356)
++
T Consensus 284 ~~ 285 (430)
T 2x5f_A 284 TF 285 (430)
T ss_dssp EE
T ss_pred EE
Confidence 88
No 166
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.76 E-value=1.3e-18 Score=166.55 Aligned_cols=246 Identities=13% Similarity=0.016 Sum_probs=160.2
Q ss_pred CCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEE-eCChhHHHHHHHHHHHHHHHH
Q 018437 65 TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG-TVGSSEAIMLAGLAFKRKWQQ 143 (356)
Q Consensus 65 ~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~-t~Ggt~a~~~al~~~~~~~~~ 143 (356)
++++++.+.+++.++.+........++...++.+++++++++++|++.. ..+++ |+|||+|+..++.++.+
T Consensus 48 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~----~~i~~~t~g~t~al~~~~~~l~~---- 119 (398)
T 2fyf_A 48 PSKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDG----YEVILGNGGATAFWDAAAFGLID---- 119 (398)
T ss_dssp SCCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTT----CEEEEEETCHHHHHHHHHHHTCS----
T ss_pred CCCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCC----ceEEEeCCchhHHHHHHHHHhcC----
Confidence 4455677888776532111111123455567788999999999999731 24777 99999999999987742
Q ss_pred HHHhcCCCCCCCeEEecCCCcch-HHHHHHhh--CCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCC
Q 018437 144 KRKEQGKPYDKPNIVTGANVQVC-WEKFARYF--EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED 220 (356)
Q Consensus 144 ~~~~~g~~~~~~~vi~s~~~h~s-~~~~~~~~--G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~ 220 (356)
+..++++...|.. +...+... |++++.||++. ....+. .+++++++|++++++||||.+.|
T Consensus 120 ----------~gv~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-g~~~~~-----~i~~~~~~v~~~~~~nptG~~~~ 183 (398)
T 2fyf_A 120 ----------KRSLHLTYGEFSAKFASAVSKNPFVGEPIIITSDP-GSAPEP-----QTDPSVDVIAWAHNETSTGVAVA 183 (398)
T ss_dssp ----------SCEEEEECSHHHHHHHHHHHHCTTSCCCEEEECCT-TCCCCC-----CCCTTCSEEEEESEETTTTEECC
T ss_pred ----------CCeEEEeCCHHHHHHHHHHHHhCCCCceEEEecCC-CCCCCc-----cccCCCCEEEEeCcCCCcceecc
Confidence 1224444454532 22345555 88999999873 233332 25678999999999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCCCCCcccc
Q 018437 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDEL 300 (356)
Q Consensus 221 i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~~~~~~~~ 300 (356)
+++|.++ + ++++|+|++|+.+..+ .++. .+|.++.++||+++.|.|+|+++++++ .. +.+
T Consensus 184 ~~~i~~~---~------~~~vivD~a~~~~~~~-------~~~~--~~di~~~s~sK~~~~~gg~g~l~~~~~-~~-~~l 243 (398)
T 2fyf_A 184 VRRPEGS---D------DALVVIDATSGAGGLP-------VDIA--ETDAYYFAPQKNFASDGGLWLAIMSPA-AL-SRI 243 (398)
T ss_dssp CCCCTTC---C-------CEEEEECTTTTTTSC-------CCGG--GCSEEEECTTSTTCSCSSEEEEEECHH-HH-HHH
T ss_pred hHHhhhh---c------CCeEEEEeccccCCcc-------cCcc--cCcEEEEecCcccCCCCceEEEEECHH-HH-HHh
Confidence 9998887 7 9999999999865442 2222 479999999999877767999888643 22 111
Q ss_pred cc-------ccCCCCCCC--C---CccccCCCChhHHHHHHHHHHHhCHHH-HHHHHHHHHhccCcc
Q 018437 301 VF-------HINYLGSDQ--P---TFTLNFSKGSSQIIAQYYQFIRLGFEE-ITFTFISSLKVCPFL 354 (356)
Q Consensus 301 ~~-------~~~~~~~~~--~---~~~~~~tr~~~~~~~~~~~l~~lg~~G-~~~~~~~~~~~a~~l 354 (356)
.. ...|..... . .....+|.+....+++.++++.+..+| ++++.++..+++++|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l 310 (398)
T 2fyf_A 244 EAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRL 310 (398)
T ss_dssp HHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHH
T ss_pred hcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 00 011221100 0 001124666666677788888777666 777777777776655
No 167
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.75 E-value=2e-17 Score=159.94 Aligned_cols=155 Identities=16% Similarity=0.033 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHH----H
Q 018437 97 QNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA----R 172 (356)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~----~ 172 (356)
..++++.+++++|.+. .+++++|++|+..++.++..+ +++|+++.++|.++...+ +
T Consensus 60 ~~~l~~~la~~~g~~~-------~v~~~sGt~A~~~~l~~~~~~-------------gd~vi~~~~~~~~~~~~~~~~~~ 119 (421)
T 2ctz_A 60 VDVLEKRLAALEGGKA-------ALATASGHAAQFLALTTLAQA-------------GDNIVSTPNLYGGTFNQFKVTLK 119 (421)
T ss_dssp HHHHHHHHHHHHTCSE-------EEEESSHHHHHHHHHHHHCCT-------------TCEEEECSCCCHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHhCCCc-------eEEecCHHHHHHHHHHHHhCC-------------CCEEEEeCCCchHHHHHHHHHHH
Confidence 3456677899999863 466677799999999876332 579999999999877665 6
Q ss_pred hhCCeeEEE-EecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccc-ccc
Q 018437 173 YFEVELKEV-KLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAAS-GGF 250 (356)
Q Consensus 173 ~~G~~v~~v-~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~-~~~ 250 (356)
..|++++.+ +.+ |+++|++++++++++|++++++|++|.+.|+++|.++|+++ |+++|+|++| +.+
T Consensus 120 ~~g~~~~~~~~~~------d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~------g~~livD~~~~~~g 187 (421)
T 2ctz_A 120 RLGIEVRFTSREE------RPEEFLALTDEKTRAWWVESIGNPALNIPDLEALAQAAREK------GVALIVDNTFGMGG 187 (421)
T ss_dssp HTTCEEEECCTTC------CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHH------TCEEEEECGGGGGG
T ss_pred HcCCEEEEECCCC------CHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEECCccccc
Confidence 779988888 543 79999999999999999999999999999999999999999 9999999999 644
Q ss_pred cccccCCCCcccccCCCceEEEEcCCcCCCCCcC-eeEEEEe
Q 018437 251 IAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG-VGWVVWR 291 (356)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g-~g~l~~~ 291 (356)
.. .. ... .++|.++.++||++++|.+ +|.+++.
T Consensus 188 ~~----~~-~~~---~~~Di~~~s~~K~l~~~g~~~G~~~~~ 221 (421)
T 2ctz_A 188 YL----LR-PLA---WGAALVTHSLTKWVGGHGAVIAGAIVD 221 (421)
T ss_dssp TS----CC-GGG---GTCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred cc----CC-ccc---cCCeEEEECCcccccCCCCcEEEEEEe
Confidence 21 11 122 3689999999999988763 6777775
No 168
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.75 E-value=4.9e-18 Score=163.40 Aligned_cols=154 Identities=13% Similarity=-0.021 Sum_probs=122.9
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH----HHHhh
Q 018437 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK----FARYF 174 (356)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~----~~~~~ 174 (356)
++++.+++++|.+. .+++++|++|+..++. +.++ +++|+++.+.|.+... .++..
T Consensus 71 ~l~~~la~~~g~~~-------~i~~~sG~~ai~~~~~-l~~~-------------gd~Vl~~~~~y~~~~~~~~~~~~~~ 129 (403)
T 3cog_A 71 CLEKAVAALDGAKY-------CLAFASGLAATVTITH-LLKA-------------GDQIICMDDVYGGTNRYFRQVASEF 129 (403)
T ss_dssp HHHHHHHHHHTCSE-------EEEESCHHHHHHHHHT-TSCT-------------TCEEEEESSCCHHHHHHHHHTGGGG
T ss_pred HHHHHHHHHhCCCc-------EEEECCHHHHHHHHHH-HhCC-------------CCEEEEeCCCcchHHHHHHHHHHHc
Confidence 44556888888862 4556666899988877 4321 5789999999987444 34567
Q ss_pred CCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCC-CcEEEeccccccccc
Q 018437 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWD-TPIHVDAASGGFIAP 253 (356)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~-~~l~vD~a~~~~~~~ 253 (356)
|++++.+|.+ |+++|++++++++++|++++++||+|.+.|+++|.++|+++ + +++++|++|+.+..
T Consensus 130 G~~v~~v~~~------d~~~l~~~i~~~t~~v~~~~p~nptG~~~~l~~i~~la~~~------g~~~livD~~~~~~~~- 196 (403)
T 3cog_A 130 GLKISFVDCS------KIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKH------GDIILVVDNTFMSPYF- 196 (403)
T ss_dssp TCEEEEECTT------SHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTSS------SCCEEEEECTTTCTTT-
T ss_pred CCEEEEECCC------CHHHHHHhcCcCCeEEEEECCCCCCCeeeCHHHHHHHHHHc------CCCEEEEECCCccccc-
Confidence 9999888864 78999999999999999999999999999999999999999 9 99999999987543
Q ss_pred ccCCCCcccccCCCceEEEEcCCcCCCCCcC--eeEEEEeCC
Q 018437 254 FLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTK 293 (356)
Q Consensus 254 ~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~g~l~~~~~ 293 (356)
.. +.+ .++|.+..|+||++++|.+ +|+++.+++
T Consensus 197 -~~---~~~---~~~div~~S~sK~~~g~~~~~~G~v~~~~~ 231 (403)
T 3cog_A 197 -QR---PLA---LGADISMYSATKYMNGHSDVVMGLVSVNCE 231 (403)
T ss_dssp -CC---TTT---TTCSEEEEETTTTTTCSSCCCCEEEEECCH
T ss_pred -CC---ccc---cCCeEEEEcChhhccCCCCCeEEEEEECcH
Confidence 11 222 3689999999999988886 499887643
No 169
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.75 E-value=8.8e-18 Score=161.43 Aligned_cols=200 Identities=11% Similarity=0.011 Sum_probs=141.0
Q ss_pred CChHHHHHHHHH-Hhccc-CCCcccCcchHHHHHHHHHHHHHHhCC--CCCCCCCCCeEE--eCChhHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMA-SINKN-YVDMDEYPVTTELQNRCVNMIAHLFNT--PVADDKTAVGVG--TVGSSEAIMLAGLAFKRK 140 (356)
Q Consensus 67 ~~~~~v~~~i~~-~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~--~~~~~~~~~~~~--t~Ggt~a~~~al~~~~~~ 140 (356)
++++.+.+++.+ .+... ...|....+..++++++.+++.+..|. ++ ..+++ |+||++|+.+++..+..-
T Consensus 47 ~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-----~~i~~~~t~g~~~a~~~~~~~~~~~ 121 (412)
T 1yaa_A 47 WVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQE-----DRVISVQSLSGTGALHISAKFFSKF 121 (412)
T ss_dssp CCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHT-----TCEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCCc-----ceEEEEeccchHhHHHHHHHHHHHh
Confidence 345788898888 76532 223444556778888877777654453 22 24788 999999999885443321
Q ss_pred HHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe-cCCccccCHHHHHHHHhhC---ceEEEEecCCCccc
Q 018437 141 WQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL-EEGYYVMNPVKAVELVDEN---TICVAAILGSTLTG 216 (356)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~~L~~~i~~~---~~~v~~~~~~~~tG 216 (356)
..+++|+++.++|..+...++..|++++.+|+ +++++.+|+++|+++++++ ++++++++++||||
T Consensus 122 -----------~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG 190 (412)
T 1yaa_A 122 -----------FPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTG 190 (412)
T ss_dssp -----------CTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTC
T ss_pred -----------CCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCC
Confidence 01468999999999999999999999999998 5445899999999999764 45555699999999
Q ss_pred ccCC---HHHHHHHHHHhhhccCCCCcEEEeccccccccccc-CCCCcc-ccc-CCC---ceEEEEcCCcCCCCCcC--e
Q 018437 217 EFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL-YPDLEW-DFR-LPL---VKSINVSGHKYGLVYAG--V 285 (356)
Q Consensus 217 ~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~-~~~~~~-~~~-~~~---~Ds~~~~~hK~l~~P~g--~ 285 (356)
.+.+ +++|.++|+++ |+++++|++|+++...-. .+.... ++. ... -+.+..+++|.+ +|.| +
T Consensus 191 ~~~~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~Glri 263 (412)
T 1yaa_A 191 LDPTSEQWVQIVDAIASK------NHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNA-GMYGERV 263 (412)
T ss_dssp CCCCHHHHHHHHHHHHHT------TCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTS-CCGGGCE
T ss_pred CCCCHHHHHHHHHHHHHC------CCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCC-CCcCCcc
Confidence 9854 66789999999 999999999976543100 000011 211 111 345677899987 4555 7
Q ss_pred eEEE
Q 018437 286 GWVV 289 (356)
Q Consensus 286 g~l~ 289 (356)
|+++
T Consensus 264 G~~~ 267 (412)
T 1yaa_A 264 GCFH 267 (412)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 8887
No 170
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.75 E-value=2.3e-17 Score=160.73 Aligned_cols=217 Identities=12% Similarity=0.048 Sum_probs=142.5
Q ss_pred hcCCCC-cccccccC-C-----CChHHHHHHHHHHh--c-ccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeE
Q 018437 52 LDGNPR-LNLASFVT-T-----WMEPECDKLVMASI--N-KNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGV 121 (356)
Q Consensus 52 ~~~~~~-~~l~~~~~-~-----~~~~~v~~~i~~~~--~-~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~ 121 (356)
.++++. ++|+.+.+ . +..+.+.+++.... + .....|....+..++++++.+++ +|.+........++
T Consensus 45 ~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l---~g~~~~~~~~~~i~ 121 (448)
T 3meb_A 45 ADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLM---FGKDSKAAQEGRIA 121 (448)
T ss_dssp HCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHHH---HCTTCHHHHTTCEE
T ss_pred hCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHHHHHHHh---cCCCccccCcCcEE
Confidence 445554 56655554 2 23366777755544 1 12223444456666766655554 37762000012477
Q ss_pred E--eCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHH----hhCCeeEEEEe-cCC-ccccCHH
Q 018437 122 G--TVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFAR----YFEVELKEVKL-EEG-YYVMNPV 193 (356)
Q Consensus 122 ~--t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~----~~G~~v~~v~~-~~~-~~~~d~~ 193 (356)
+ |+||++|+.+++...... ..+++|+++.++|..+...++ ..|++++.+|+ +++ ++.+|++
T Consensus 122 ~~~t~ggt~al~l~~~~~~~~-----------~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e 190 (448)
T 3meb_A 122 SCQSLSGTGSLHIGFEFLHLW-----------MPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFS 190 (448)
T ss_dssp EEEESHHHHHHHHHHHHHHHH-----------CTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHH
T ss_pred EEECCcHHHHHHHHHHHHHHh-----------CCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHH
Confidence 8 999999998754322211 015789999999999999999 99999999999 554 5899999
Q ss_pred HHHHHHhh---CceEEEEecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccC-CCCcc-cc-c
Q 018437 194 KAVELVDE---NTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY-PDLEW-DF-R 264 (356)
Q Consensus 194 ~L~~~i~~---~~~~v~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~-~~~~~-~~-~ 264 (356)
+|++++++ +++++++++++||||.+.+ +++|+++|+++ ++++++|++|+++...-.. +.... .+ .
T Consensus 191 ~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~------~~~li~Deay~~~~~~~~~~~~~~~~~~~~ 264 (448)
T 3meb_A 191 NTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEK------KHIAFFDSAYQGFATGSFEADAFAVRMFVD 264 (448)
T ss_dssp HHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEEESCTTTSSSCHHHHTHHHHHHHH
T ss_pred HHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHC------CCEEEEecccccccCCCcccCchhHHHHhh
Confidence 99999984 5788889999999999866 55699999999 9999999999875541000 00000 11 1
Q ss_pred CCCceEEEEcCCcCCCC-CcCeeEE
Q 018437 265 LPLVKSINVSGHKYGLV-YAGVGWV 288 (356)
Q Consensus 265 ~~~~Ds~~~~~hK~l~~-P~g~g~l 288 (356)
...-..+..|++|.++. ...+|++
T Consensus 265 ~~~~~i~~~S~SK~~g~~G~RiG~l 289 (448)
T 3meb_A 265 AGVEVLVAQSFSKNFGLYGERIGCL 289 (448)
T ss_dssp TTCCEEEEEECTTTSCCGGGCCEEE
T ss_pred cCCcEEEEecccccCCCccccceee
Confidence 11223456779998742 3458887
No 171
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.75 E-value=1e-17 Score=163.94 Aligned_cols=156 Identities=12% Similarity=0.073 Sum_probs=127.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH----H
Q 018437 96 LQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF----A 171 (356)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~----~ 171 (356)
..+++++++++++|.+. .++++||++|+..++. +.+ .+++|+++.+.|.++... +
T Consensus 134 ~~~~l~~~la~~~g~~~-------~i~~~sGt~al~~~l~-~~~-------------~Gd~Vi~~~~~y~~~~~~~~~~~ 192 (464)
T 1ibj_A 134 TRDALESLLAKLDKADR-------AFCFTSGMAALSAVTH-LIK-------------NGEEIVAGDDVYGGSDRLLSQVV 192 (464)
T ss_dssp HHHHHHHHHHHHHTCSE-------EEEESSHHHHHHHHHT-TSC-------------TTCEEEEESSCCHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHhCCCe-------EEEECCHHHHHHHHHH-HhC-------------CCCEEEEECCCchhHHHHHHHHH
Confidence 57788999999999753 6788888998876654 221 157899999999988754 5
Q ss_pred HhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccccc
Q 018437 172 RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFI 251 (356)
Q Consensus 172 ~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~ 251 (356)
+..|++++.+|++ |+++|++++++++++|++++++||+|.+.|+++|.++|+++ |+++|+|++|..+.
T Consensus 193 ~~~G~~v~~v~~~------d~~~l~~~i~~~tk~v~l~~p~NptG~v~~l~~i~~la~~~------gi~livDea~~~g~ 260 (464)
T 1ibj_A 193 PRSGVVVKRVNTT------KLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAHAQ------GALVLVDNSIMSPV 260 (464)
T ss_dssp GGGTCEEEEECTT------SHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHTT------TCEEEEECTTTCTT
T ss_pred HHcCCEEEEeCCC------CHHHHHHHhccCceEEEEeCCCCCCCEeecHHHHHHHHHHc------CCEEEEECCCcccc
Confidence 6679999888763 78999999998999999999999999999999999999999 99999999997543
Q ss_pred ccccCCCCcccccCCCceEEEEcCCcCCCCCcCe--eEEEEeC
Q 018437 252 APFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV--GWVVWRT 292 (356)
Q Consensus 252 ~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~--g~l~~~~ 292 (356)
. . .+.+ .++|.++.++||++++|.|+ |+++.++
T Consensus 261 ~--~---~~~~---~~~div~~S~sK~~~g~~Gl~~G~l~~~~ 295 (464)
T 1ibj_A 261 L--S---RPLE---LGADIVMHSATKFIAGHSDVMAGVLAVKG 295 (464)
T ss_dssp T--C---CGGG---TTCSEEEEETTTTTTCSSCCCCEEEEECS
T ss_pred c--C---Chhh---cCCEEEEECCcccccCCCCCcEEEEEECh
Confidence 2 1 1122 36899999999999888776 9998865
No 172
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.75 E-value=1e-17 Score=162.00 Aligned_cols=159 Identities=16% Similarity=0.091 Sum_probs=127.1
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEE---eCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecC-CCcchHH----
Q 018437 97 QNRCVNMIAHLFNTPVADDKTAVGVG---TVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA-NVQVCWE---- 168 (356)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~---t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~-~~h~s~~---- 168 (356)
.+++.+.+++++|.+. .++ +++|++||..++.++.++ +++|+++. +.|..+.
T Consensus 76 ~~~Le~~lA~l~g~e~-------alv~p~~~sGt~A~~~al~all~p-------------GD~Vl~~~~~~y~~~~~~~g 135 (427)
T 3hvy_A 76 RDSLDRVYANIFNTES-------AFVRPHFVNGTHAIGAALFGNLRP-------------NDTMMSICGMPYDTLHDIIG 135 (427)
T ss_dssp HHHHHHHHHHHHTCSE-------EEEETTCCSHHHHHHHHHHHTCCT-------------TCEEEECSSSCCGGGHHHHT
T ss_pred HHHHHHHHHHHhCCCc-------eEEeCCCCcHHHHHHHHHHHhcCC-------------CCEEEEeCCCCchhHHHHhc
Confidence 3445566999999975 455 789999999988877543 57899988 8877655
Q ss_pred -------HHHHhhCCeeEEEEecCCccccCHHHHHHHHh--hCceEEEEec----CCCcccccCCHHHHHHHHHH--hhh
Q 018437 169 -------KFARYFEVELKEVKLEEGYYVMNPVKAVELVD--ENTICVAAIL----GSTLTGEFEDVKLLHDLLTK--KNE 233 (356)
Q Consensus 169 -------~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~--~~~~~v~~~~----~~~~tG~~~~i~~I~~i~~~--~~~ 233 (356)
..++..|++++.+|. + ++.+|+++|+++++ ++|++|++++ |+||+|.+.|+++|.++|++ +
T Consensus 136 ~~~~~~~~~l~~~G~~~~~v~~-~-~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~-- 211 (427)
T 3hvy_A 136 MDDSKKVGSLREYGVKYKMVDL-K-DGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNE-- 211 (427)
T ss_dssp CCTTCCSCCTGGGTCEEEECCC-B-TTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCS--
T ss_pred cccchhhhHHHHcCCEEEEecC-C-CCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCC--
Confidence 344567999999998 3 48999999999998 7899999999 99999999999999999999 8
Q ss_pred ccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCC---CcCeeEEEEe
Q 018437 234 ETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLV---YAGVGWVVWR 291 (356)
Q Consensus 234 ~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~---P~g~g~l~~~ 291 (356)
++++++|++|+.++.. . .+.. .++|.++.+.||++++ |.| |+++.+
T Consensus 212 ----g~~livD~a~~~~~~~---~-~p~~---~gaDiv~~S~sK~lgg~g~~~G-G~i~~~ 260 (427)
T 3hvy_A 212 ----NVIVFVDNCYGEFVEE---K-EPTD---VGADIIAGSLIKNIGGGIATTG-GYIAGK 260 (427)
T ss_dssp ----SSEEEEECTTCTTTSS---S-CGGG---GTCSEEEEETTSGGGTTTCCSC-EEEEEC
T ss_pred ----CCEEEEECCccccccC---C-CCcc---cCCeEEEECCcccccccccceE-EEEEEC
Confidence 9999999999876531 1 1122 3689999999999876 444 887764
No 173
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.75 E-value=2.3e-17 Score=162.92 Aligned_cols=186 Identities=11% Similarity=0.016 Sum_probs=139.1
Q ss_pred CCcccCcchHHHHHHHHHHHHHHhC-CCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCC
Q 018437 85 VDMDEYPVTTELQNRCVNMIAHLFN-TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANV 163 (356)
Q Consensus 85 ~~~~~~~~~~~le~~~~~~la~l~g-~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~ 163 (356)
..|....+...+++++.+++++..| ++.+. ..+++|+|+++++.+++.++.++ | +..++.|+++.+.
T Consensus 123 ~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~---~~i~~t~G~~~ai~~~~~~l~~~--------g-d~~~d~Vlv~~p~ 190 (498)
T 3ihj_A 123 GSYSASQGVNCIREDVAAYITRRDGGVPADP---DNIYLTTGASDGISTILKILVSG--------G-GKSRTGVMIPIPQ 190 (498)
T ss_dssp -----CCSCHHHHHHHHHHHHHHTTTCCCCG---GGEEEESSHHHHHHHHHHHHCCC--------C-GGGSEEEEEEESC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhcCCCCCCc---ccEEEcCCHHHHHHHHHHHHcCC--------C-CCCCCEEEEeCCC
Confidence 3456667888999999999999885 65321 45899999999999998877532 0 0012489999999
Q ss_pred cchHHHHHHhhCCeeEEEEecCC-ccccCHHHHHHHHhh-----CceEEEEecCCCcccccC---CHHHHHHHHHHhhhc
Q 018437 164 QVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDE-----NTICVAAILGSTLTGEFE---DVKLLHDLLTKKNEE 234 (356)
Q Consensus 164 h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~-----~~~~v~~~~~~~~tG~~~---~i~~I~~i~~~~~~~ 234 (356)
|.++...++..|++++.++++++ +|.+|+++|++++++ ++++|++++|+||||.+. ++++|.++|+++
T Consensus 191 y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~--- 267 (498)
T 3ihj_A 191 YPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEE--- 267 (498)
T ss_dssp CTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH---
T ss_pred chhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHc---
Confidence 99999999999999999999763 489999999999987 589999999999999994 577899999999
Q ss_pred cCCCCcEEEecccccccccccCCCCccccc-C---------CCceEE-EEcCCcCCC--CCcCeeEEEE
Q 018437 235 TGWDTPIHVDAASGGFIAPFLYPDLEWDFR-L---------PLVKSI-NVSGHKYGL--VYAGVGWVVW 290 (356)
Q Consensus 235 ~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~---------~~~Ds~-~~~~hK~l~--~P~g~g~l~~ 290 (356)
++++++|++|+.+... .......+. . ..+..+ ..+++|.+. +....|++++
T Consensus 268 ---~~~li~De~y~~~~~~--~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~ 331 (498)
T 3ihj_A 268 ---KLFLLADEVYQDNVYS--PDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEV 331 (498)
T ss_dssp ---TCEEEEECTTTTCBCC--TTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEE
T ss_pred ---CcEEEEEcCccccccC--CCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEE
Confidence 9999999999876552 110111111 0 112234 447899874 5677888875
No 174
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.75 E-value=3.4e-17 Score=156.36 Aligned_cols=198 Identities=12% Similarity=-0.050 Sum_probs=134.8
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
+++.+.+++.+.+.........+ ......++++++++++|++. ..+++|+||++|+..++.+++.. .
T Consensus 62 ~~~~v~~a~~~~~~~~~~~~~~~--~~~~~~~l~~~la~~~~~~~-----~~v~~~~gg~~a~~~al~~~~~~-~----- 128 (395)
T 1vef_A 62 GNPEVVEAVKRQAETLMAMPQTL--PTPMRGEFYRTLTAILPPEL-----NRVFPVNSGTEANEAALKFARAH-T----- 128 (395)
T ss_dssp TCHHHHHHHHHHHHHCCCCCTTS--CCHHHHHHHHHHHHTSCTTE-----EEEEEESSHHHHHHHHHHHHHHH-H-----
T ss_pred CCHHHHHHHHHHHHhCCCCcccc--CCHHHHHHHHHHHHhcCCCc-----CEEEEcCcHHHHHHHHHHHHHHH-h-----
Confidence 45788888887775432111112 23456678888999998754 24899999999999999876521 0
Q ss_pred cCCCCCCCeEEecCCCc-chHHHHHHhhCCeeE---EEEecCCc---cccCHHHHHHHHhhCceEEEEecCCCcccccCC
Q 018437 148 QGKPYDKPNIVTGANVQ-VCWEKFARYFEVELK---EVKLEEGY---YVMNPVKAVELVDENTICVAAILGSTLTGEFED 220 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h-~s~~~~~~~~G~~v~---~v~~~~~~---~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~ 220 (356)
.+++|++++++| .++..++...|.+++ .+|+..+. -..|+++|++++++++++|+++.++|+||.+.|
T Consensus 129 -----~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~ 203 (395)
T 1vef_A 129 -----GRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDEETAAVILEPVQGEGGVRPA 203 (395)
T ss_dssp -----SCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCTTEEEEEECSEETTTTSEEC
T ss_pred -----CCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhccCEEEEEEeCccCCCCccCC
Confidence 145777777765 455566666676521 11221110 024899999999888889888888889999877
Q ss_pred ----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeCC
Q 018437 221 ----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 221 ----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~~ 293 (356)
+++|.++|+++ |+++|+|++|+++.. .......+.....+|.+ +.||+++++.++|+++++++
T Consensus 204 ~~~~l~~i~~l~~~~------~~~li~Dea~~~~~~--~g~~~~~~~~~~~~d~~--s~sK~~~~g~~~G~~~~~~~ 270 (395)
T 1vef_A 204 TPEFLRAAREITQEK------GALLILDEIQTGMGR--TGKRFAFEHFGIVPDIL--TLAKALGGGVPLGVAVMREE 270 (395)
T ss_dssp CHHHHHHHHHHHHHH------TCEEEEECTTTTTTT--TSSSSTHHHHTCCCSEE--EECGGGGTTSSCEEEEEEHH
T ss_pred CHHHHHHHHHHHHHc------CCEEEEEecccCCcc--CCchhHhhhcCCCCCEE--EEcccccCCCceEEEEehHH
Confidence 99999999999 999999999986321 11111112212246766 45999888889999998753
No 175
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.75 E-value=8.5e-18 Score=167.42 Aligned_cols=213 Identities=14% Similarity=0.050 Sum_probs=151.1
Q ss_pred cccccCCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHh-C-CCCCCCCCCCeEEeCChhHHHHHHHHHH
Q 018437 60 LASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLF-N-TPVADDKTAVGVGTVGSSEAIMLAGLAF 137 (356)
Q Consensus 60 l~~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~-g-~~~~~~~~~~~~~t~Ggt~a~~~al~~~ 137 (356)
|+.+.+..+++.+.+.+.+.+..+ .++....+..++++++.+++++.. + ++.. ....+++|+||++|+.+++.++
T Consensus 108 l~~g~~~~~~~~~v~a~~~~~~~~-~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~--~~~~i~~t~G~t~al~~~~~~l 184 (533)
T 3f6t_A 108 YCHTELGLNRDKVVAEWVNGAVAN-NYPVPDRCLVNTEKIINYFLQELSYKDANLA--EQTDLFPTEGGTAAIVYAFHSL 184 (533)
T ss_dssp HHHHTTCCCHHHHHHHHHHHHHTC-SCCSSSSCCHHHHHHHHHHHHHHHTTTCCCG--GGEEEEEEEHHHHHHHHHHHHH
T ss_pred ccCCCCCcCCcHHHHHHHHHHHhC-CCCCCcccHHHHHHHHHHHHHHhcCCCCCCC--CcceEEEECCHHHHHHHHHHHh
Confidence 333334444555544444444322 223345577889999999997763 3 3321 0124899999999999998874
Q ss_pred HHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec---CCccccCHHHHHHHHhhCceEEEEecCCCc
Q 018437 138 KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE---EGYYVMNPVKAVELVDENTICVAAILGSTL 214 (356)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~---~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (356)
... +.-..+++|+++.++|.++...++..|++++.++++ ++++.+|+++|++++++++++|++++|+||
T Consensus 185 ~~~--------~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~NP 256 (533)
T 3f6t_A 185 AEN--------HLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNP 256 (533)
T ss_dssp HHT--------TSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCTT
T ss_pred hhh--------hccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCCC
Confidence 221 001125799999999999999999999999999985 345899999999999989999999999999
Q ss_pred ccccCCHH---HHHHHHH-HhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCC-CCcCeeEEE
Q 018437 215 TGEFEDVK---LLHDLLT-KKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVV 289 (356)
Q Consensus 215 tG~~~~i~---~I~~i~~-~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~-~P~g~g~l~ 289 (356)
||.+.+.+ +|.++|+ ++ ++++++|++|+.+...+ ....-.....+.+..|++|.++ ....+|+++
T Consensus 257 tG~~~~~~~l~~l~~la~~~~------~~~li~De~y~~~~~~~----~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~ 326 (533)
T 3f6t_A 257 TSKEFDTNALNAIKQAVEKNP------KLMIISDEVYGAFVPNF----KSIYSVVPYNTMLVYSYSKLFGCTGWRLGVIA 326 (533)
T ss_dssp TCBCCCHHHHHHHHHHHHHCT------TCEEEEECTTGGGSTTC----CCHHHHSGGGEEEEEESHHHHTCGGGCEEEEE
T ss_pred CccccCHHHHHHHHHHHHhCC------CCEEEEcCCccccccCc----cCHhhcCCCCEEEEecCcccCCCcccceEEEE
Confidence 99997766 7788888 68 99999999998755421 1111112345678889999874 223489998
Q ss_pred EeCC
Q 018437 290 WRTK 293 (356)
Q Consensus 290 ~~~~ 293 (356)
.+++
T Consensus 327 ~~~~ 330 (533)
T 3f6t_A 327 LNEK 330 (533)
T ss_dssp EESS
T ss_pred ECcH
Confidence 8765
No 176
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.75 E-value=3e-17 Score=156.59 Aligned_cols=156 Identities=15% Similarity=-0.033 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHH----HH
Q 018437 97 QNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF----AR 172 (356)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~----~~ 172 (356)
..++++.+++++|.+. .+++++|++|+..++.++..+ +++|+++.++|.+.... ++
T Consensus 54 ~~~l~~~la~~~~~~~-------~i~~~sGt~a~~~~~~~~~~~-------------g~~vl~~~~~~~~~~~~~~~~~~ 113 (386)
T 1cs1_A 54 RDVVQRALAELEGGAG-------AVLTNTGMSAIHLVTTVFLKP-------------GDLLVAPHDCYGGSYRLFDSLAK 113 (386)
T ss_dssp HHHHHHHHHHHHTCSE-------EEEESSHHHHHHHHHHHHCCT-------------TCEEEEETTCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCc-------EEEeCCHHHHHHHHHHHHhCC-------------CCEEEEecCCcHhHHHHHHHHHH
Confidence 3456667888888862 445566699999998877432 47899999999874443 46
Q ss_pred hhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccc
Q 018437 173 YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA 252 (356)
Q Consensus 173 ~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~ 252 (356)
..|++++.+|.+ |+++|++++++++++|++++++||+|.+.|+++|.++|+++ |+++|+|++|+.+..
T Consensus 114 ~~g~~~~~~~~~------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~------~~~li~De~~~~~~~ 181 (386)
T 1cs1_A 114 RGCYRVLFVDQG------DEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREV------GAVSVVDNTFLSPAL 181 (386)
T ss_dssp TTSCEEEEECTT------CHHHHHHHHHTCCSEEEEECSCTTTCCCCCHHHHHHHHHHT------TCEEEEECTTTCTTT
T ss_pred hcCCEEEEeCCC------CHHHHHHhhccCCcEEEEeCCCCCCCcccCHHHHHHHHHHc------CCEEEEECCCccccc
Confidence 678888888753 78999999999999999999999999999999999999999 999999999987654
Q ss_pred cccCCCCcccccCCCceEEEEcCCcCCCCCcCe--eEEEEeC
Q 018437 253 PFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV--GWVVWRT 292 (356)
Q Consensus 253 ~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~--g~l~~~~ 292 (356)
+ .... .++|.++.++||++++|.+. |+++.++
T Consensus 182 ~-----~~~~---~~~di~~~s~sK~~~~~~~~~~G~~~~~~ 215 (386)
T 1cs1_A 182 Q-----NPLA---LGADLVLHSCTKYLNGHSDVVAGVVIAKD 215 (386)
T ss_dssp C-----CGGG---GTCSEEEEETTTTTTCSSCCCCEEEEESS
T ss_pred C-----Cccc---cCceEEEEcCcccccCCCCceeEEEEeCc
Confidence 2 1122 36899999999999888774 9988865
No 177
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.74 E-value=2e-17 Score=157.85 Aligned_cols=202 Identities=11% Similarity=-0.049 Sum_probs=142.1
Q ss_pred CChHHHHHHHHHHhcc-cCCCcccCcchHHHHHHHHHHHHHHhCC--CCCCCCCCCeEE--eCChhHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNT--PVADDKTAVGVG--TVGSSEAIMLAGLAFKRKW 141 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~--~~~~~~~~~~~~--t~Ggt~a~~~al~~~~~~~ 141 (356)
++++.+.+++.+.+.. ....|...++..++++++.+++.+..+. ++ ..+++ |+||++|+..++.++...
T Consensus 44 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~-----~~v~~~~~~g~~~a~~~~~~~~~~~- 117 (396)
T 2q7w_A 44 PVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALIND-----KRARTAQTPGGTGALRVAADFLAKN- 117 (396)
T ss_dssp CCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHT-----TCEEEEEESHHHHHHHHHHHHHHHH-
T ss_pred cCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCcccc-----ccEEEEecccchhhHHHHHHHHHHh-
Confidence 3457888888776543 2233444556777777766666433221 22 23666 999999999998776431
Q ss_pred HHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhh---CceEEEEecCCCcccc
Q 018437 142 QQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDE---NTICVAAILGSTLTGE 217 (356)
Q Consensus 142 ~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~ 217 (356)
..+++|+++.++|..+...++..|++++.+|.++ +++.+|+++|++++++ +++++++++++||||.
T Consensus 118 ----------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~ 187 (396)
T 2q7w_A 118 ----------TSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGI 187 (396)
T ss_dssp ----------SCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCC
T ss_pred ----------CCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCC
Confidence 0157899999999999999999999999999852 3489999999999975 4678888999999999
Q ss_pred cCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccc-cc-CCCceEEEEcCCcCCC-CCcCeeEEEE
Q 018437 218 FED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FR-LPLVKSINVSGHKYGL-VYAGVGWVVW 290 (356)
Q Consensus 218 ~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~-~~~~Ds~~~~~hK~l~-~P~g~g~l~~ 290 (356)
+.+ +++|.++|+++ ++++++|++|+++....-....... +. ...-+.+..+.+|.++ ....+|++++
T Consensus 188 ~~~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~ 260 (396)
T 2q7w_A 188 DPTLEQWQTLAQLSVEK------GWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTL 260 (396)
T ss_dssp CCCHHHHHHHHHHHHHH------TCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEE
T ss_pred CCCHHHHHHHHHHHHHC------CCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEE
Confidence 854 56899999999 9999999999875431000000111 11 1123466778999874 2334799986
No 178
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.74 E-value=6.1e-18 Score=163.10 Aligned_cols=209 Identities=13% Similarity=0.035 Sum_probs=145.8
Q ss_pred CcccccccCCC----ChHHHHHHHH--HHhccc--CCCc-ccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChh
Q 018437 57 RLNLASFVTTW----MEPECDKLVM--ASINKN--YVDM-DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (356)
Q Consensus 57 ~~~l~~~~~~~----~~~~v~~~i~--~~~~~~--~~~~-~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt 127 (356)
.++|+.+.+.+ .++.+.+++. +.+... ...| ...++..++++ .+++++++++ ..+++|+|++
T Consensus 27 ~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~----~ia~~~~~~~-----~~i~~t~G~~ 97 (423)
T 3ez1_A 27 NLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARA----LFAGYLDVKA-----ENVLVWNNSS 97 (423)
T ss_dssp CEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHH----HHHHHTTSCG-----GGEEECSSCH
T ss_pred eEecCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHH----HHHHHhCCCh-----hhEEEeCCcH
Confidence 35566665552 2235666654 443311 1233 44445555554 4777788876 3589999999
Q ss_pred HHHH--HHHHHHHH--HHHHHHHhcCCC----CCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHH
Q 018437 128 EAIM--LAGLAFKR--KWQQKRKEQGKP----YDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (356)
Q Consensus 128 ~a~~--~al~~~~~--~~~~~~~~~g~~----~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i 199 (356)
+++. .++.++.. + |.. ..+++|+++.++|..+...++..|++++.+|++++ + +|+++|++++
T Consensus 98 ~al~~~~~~~~l~~~~~--------g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-g-~d~~~l~~~l 167 (423)
T 3ez1_A 98 LELQGLVLTFALLHGVR--------GSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD-G-PDVDAVERLA 167 (423)
T ss_dssp HHHHHHHHHHHHHTCCT--------TCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT-E-ECHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCC--------CccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC-C-CCHHHHHHHH
Confidence 9997 77776653 2 000 00368999999999999999999999999999874 4 9999999999
Q ss_pred h--hCceEEEEe-cCCCcccccCCHH---HHHHHH-HHhhhccCCCCcEEEecccccccccccC-C-CCc---ccc----
Q 018437 200 D--ENTICVAAI-LGSTLTGEFEDVK---LLHDLL-TKKNEETGWDTPIHVDAASGGFIAPFLY-P-DLE---WDF---- 263 (356)
Q Consensus 200 ~--~~~~~v~~~-~~~~~tG~~~~i~---~I~~i~-~~~~~~~~~~~~l~vD~a~~~~~~~~~~-~-~~~---~~~---- 263 (356)
. +++++|+++ +++||||.+.+.+ +|.++| +++ ++++|+|++|+.+.. .. . ... ..+
T Consensus 168 ~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~------~~~li~De~y~~~~~--~~~~~~~~~~~~~~~~~~ 239 (423)
T 3ez1_A 168 GTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAP------DFTIFADDAYRVHHL--VEEDRAEPVNFVVLARDA 239 (423)
T ss_dssp HSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSST------TCEEEEECTTSSCBC--CSSSCCCCCCHHHHHHHH
T ss_pred hhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhcc------CCEEEEECCcchhhc--CCCCCCCCcchhhhhhcc
Confidence 4 678888654 8999999998776 788888 888 999999999985322 11 0 000 111
Q ss_pred cCCCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 264 RLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 264 ~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
.....+.+..+++|+++.+.++|+++..+
T Consensus 240 ~~~~~~i~~~S~sK~~~~G~r~G~~~~~~ 268 (423)
T 3ez1_A 240 GYPDRAFVFASTSKITFAGAGLGFVASSE 268 (423)
T ss_dssp TCTTSEEEEEESTTTSCSSSSCEEEEECH
T ss_pred CCCCeEEEEeCchhhccCCcceEEEEeCH
Confidence 12355677888999877788999988753
No 179
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.74 E-value=6.4e-17 Score=154.29 Aligned_cols=201 Identities=10% Similarity=-0.045 Sum_probs=140.3
Q ss_pred CChHHHHHHHHHHhcc-cCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEE--eCChhHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG--TVGSSEAIMLAGLAFKRKWQQ 143 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~--t~Ggt~a~~~al~~~~~~~~~ 143 (356)
++++.+.+++.+.+.. ....|....+..++++++.+++... +.++ ..+++ |+||++|+..++.+++...
T Consensus 44 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~~~~-----~~v~~~~~~g~~~a~~~~~~~~~~~~-- 115 (394)
T 2ay1_A 44 PIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGD-GLKS-----ETTATLATVGGTGALRQALELARMAN-- 115 (394)
T ss_dssp CCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGG-GCCG-----GGEEEEEEEHHHHHHHHHHHHHHHHC--
T ss_pred cCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCC-CCCc-----ccEEEEecCCchhHHHHHHHHHHhcC--
Confidence 3457888888776543 2223444456677777766555321 2233 24677 9999999999988776420
Q ss_pred HHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhC---ceEEEEecCCCcccccC
Q 018437 144 KRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDEN---TICVAAILGSTLTGEFE 219 (356)
Q Consensus 144 ~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~---~~~v~~~~~~~~tG~~~ 219 (356)
.+++|+++.++|..+...++..|++++.+|++. +++.+|+++|++++++. ++++++++++||||.+.
T Consensus 116 ---------~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~ 186 (394)
T 2ay1_A 116 ---------PDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANL 186 (394)
T ss_dssp ---------TTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCC
T ss_pred ---------CCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCC
Confidence 146899999999999999999999999999852 34889999999999753 56778899999999986
Q ss_pred C---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccc-ccCCCce-EEEEcCCcCCC-CCcCeeEEEE
Q 018437 220 D---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVK-SINVSGHKYGL-VYAGVGWVVW 290 (356)
Q Consensus 220 ~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~D-s~~~~~hK~l~-~P~g~g~l~~ 290 (356)
+ +++|.++|+++ ++++++|++|+++....-.+..... +...+.+ .+..+.+|+++ ....+|++++
T Consensus 187 ~~~~l~~i~~~~~~~------~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~ 257 (394)
T 2ay1_A 187 TLDQWAEIASILEKT------GALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLA 257 (394)
T ss_dssp CHHHHHHHHHHHHHH------TCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEE
T ss_pred CHHHHHHHHHHHHHC------CCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEE
Confidence 5 56889999999 9999999999875431000000011 1111223 44667899875 3345799987
No 180
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.74 E-value=3.8e-17 Score=159.16 Aligned_cols=187 Identities=14% Similarity=0.038 Sum_probs=134.0
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
..+.+.+++. .....+...++..+++ +.+++++|.+. +++|+||++|+..++.++.++
T Consensus 56 ~~~~~~~a~~----~~~~~y~~~~~~~~l~----~~la~~~~~~~-------~~~~~~gt~a~~~al~~l~~~------- 113 (456)
T 2ez2_A 56 MSDKQWAGMM----MGDEAYAGSENFYHLE----RTVQELFGFKH-------IVPTHQGRGAENLLSQLAIKP------- 113 (456)
T ss_dssp CCHHHHHHHT----TCCCCSSSCHHHHHHH----HHHHHHHCCSE-------EEEESSHHHHHHHHHHHHCCT-------
T ss_pred CCHHHHHHhh----cchhhcccChhHHHHH----HHHHHHhCCCc-------EEEeCCcHHHHHHHHHHhCCC-------
Confidence 3455555553 1222333444554554 45788888753 899999999999999887432
Q ss_pred cCCCCCCCeEEecCCCc-chHHHHHHhhCCeeEEEEecCC---------ccccCHHHHHHHHhhCc----eEEEEecCCC
Q 018437 148 QGKPYDKPNIVTGANVQ-VCWEKFARYFEVELKEVKLEEG---------YYVMNPVKAVELVDENT----ICVAAILGST 213 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h-~s~~~~~~~~G~~v~~v~~~~~---------~~~~d~~~L~~~i~~~~----~~v~~~~~~~ 213 (356)
++ +++.++| .++..++...|++++.++++++ ++.+|+++|++++++++ ++|++++|+|
T Consensus 114 ------gd--i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n 185 (456)
T 2ez2_A 114 ------GQ--YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVN 185 (456)
T ss_dssp ------TC--EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBT
T ss_pred ------CC--EeccccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCC
Confidence 34 7778888 7888899999999999998732 26899999999998765 8899999998
Q ss_pred -cccccCC---HHHHHHHHHHhhhccCCCCcEEEeccccccc--------ccccCCCCcc----cccCCCceEEEEcCCc
Q 018437 214 -LTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFI--------APFLYPDLEW----DFRLPLVKSINVSGHK 277 (356)
Q Consensus 214 -~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~--------~~~~~~~~~~----~~~~~~~Ds~~~~~hK 277 (356)
++|.+.+ +++|.++|+++ |+++|+|++|+.+. ..+ .+.... .+. ...|.+++|+||
T Consensus 186 ~ptG~~~~~~~l~~i~~la~~~------~i~li~De~~~~g~~~~~~~~~~~~-~g~~~~~~~~~~~-~~~d~~~~S~kk 257 (456)
T 2ez2_A 186 LAGGQPVSMANMRAVRELTEAH------GIKVFYDATRCVENAYFIKEQEQGF-ENKSIAEIVHEMF-SYADGCTMSGKK 257 (456)
T ss_dssp TTTSBCCCHHHHHHHHHHHHHT------TCCEEEECTTHHHHHHHHHHHSTTC-TTSCHHHHHHHHH-TTCSEEEEETTT
T ss_pred CCCCccCCHHHHHHHHHHHHHc------CCeEEEEcccccccccccccccccc-CCcchhhhhhhhc-ccCCEEEEeCcc
Confidence 9999866 99999999999 99999999998631 111 111100 011 235888888999
Q ss_pred CCCCCcCeeEEEEeCC
Q 018437 278 YGLVYAGVGWVVWRTK 293 (356)
Q Consensus 278 ~l~~P~g~g~l~~~~~ 293 (356)
+++.| ..|+++.+++
T Consensus 258 ~~~~~-~gG~~~~~~~ 272 (456)
T 2ez2_A 258 DCLVN-IGGFLCMNDD 272 (456)
T ss_dssp TTCCS-SCEEEEESCH
T ss_pred cCCCC-ceeEEEECCH
Confidence 97655 4688876544
No 181
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.74 E-value=2.6e-17 Score=159.03 Aligned_cols=181 Identities=17% Similarity=0.032 Sum_probs=132.7
Q ss_pred CcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHH--HHHHHHHHHHHHHHHhcCC-----CCCCCeEE
Q 018437 86 DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIM--LAGLAFKRKWQQKRKEQGK-----PYDKPNIV 158 (356)
Q Consensus 86 ~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~--~al~~~~~~~~~~~~~~g~-----~~~~~~vi 158 (356)
.|....+..+++++ +++++++++ ..+++|+|+++++. .++.++.+.. +|. ...+++|+
T Consensus 73 ~Y~~~~g~~~lr~~----ia~~~~~~~-----~~i~~t~G~~~al~~~~~~~~l~~~~------~g~~~~~~~~~gd~V~ 137 (427)
T 3ppl_A 73 NYGGLDGIVDIRQI----WADLLGVPV-----EQVLAGDASSLNIMFDVISWSYIFGN------NDSVQPWSKEETVKWI 137 (427)
T ss_dssp SSCCSSCCHHHHHH----HHHHHTSCG-----GGEEECSSCHHHHHHHHHHHHHHHCC------TTCSSCGGGSSCCEEE
T ss_pred CCCCCCCcHHHHHH----HHHHhCCCc-----ceEEEeCCcHHHHHHHHHHHHHhccC------CcccccccCCCCCEEE
Confidence 34444455555555 666678876 35899999999994 6776665400 000 00147899
Q ss_pred ecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHh-hCceEEEEe-cCCCcccccCCHH---HHHHHH-HHhh
Q 018437 159 TGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD-ENTICVAAI-LGSTLTGEFEDVK---LLHDLL-TKKN 232 (356)
Q Consensus 159 ~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~-~~~~~v~~~-~~~~~tG~~~~i~---~I~~i~-~~~~ 232 (356)
++.++|..+...++..|++++.+|++++ + +|+++|+++++ +++++|+++ +++||||.+.+.+ +|.++| +++
T Consensus 138 v~~p~y~~~~~~~~~~g~~~~~v~~~~~-g-~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~- 214 (427)
T 3ppl_A 138 CPVPGYDRHFSITERFGFEMISVPMNED-G-PDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAP- 214 (427)
T ss_dssp EEESCCHHHHHHHHHTTCEEEEEEEETT-E-ECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSST-
T ss_pred EcCCCcHHHHHHHHHcCCEEEEeCCCCC-C-CCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcC-
Confidence 9999999999999999999999999875 4 99999999995 578888766 8899999998877 888888 889
Q ss_pred hccCCCCcEEEecccccccccccCCC-Cccccc-------CCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 233 EETGWDTPIHVDAASGGFIAPFLYPD-LEWDFR-------LPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 233 ~~~~~~~~l~vD~a~~~~~~~~~~~~-~~~~~~-------~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
++++|+|++|+.+.+. ... ...++. ..+.+.+..+++|+++.+.++|+++..
T Consensus 215 -----~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~ 274 (427)
T 3ppl_A 215 -----DFRVVWDNAYAVHTLT--DEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTS 274 (427)
T ss_dssp -----TCEEEEECTTTTCBSS--SCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECC
T ss_pred -----CCEEEEECCCcccccC--CCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcC
Confidence 9999999999874331 111 111111 235667788899997777889988764
No 182
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.74 E-value=2e-17 Score=160.36 Aligned_cols=164 Identities=15% Similarity=0.137 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecC-CCcchHHHHHH--
Q 018437 96 LQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA-NVQVCWEKFAR-- 172 (356)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~-~~h~s~~~~~~-- 172 (356)
..+++.+++++++|.+... . .++.++|++|+..++.++.++ +++|+++. +.|.++...+.
T Consensus 66 ~~~~l~~~la~~~g~~~~~---~-~i~~~sGt~Ai~~al~al~~~-------------Gd~Vl~~~~~~y~~~~~~~~l~ 128 (431)
T 3ht4_A 66 GRDTLEKVYADVFGAEAGL---V-RPQIISGTHAISTALFGILRP-------------GDELLYITGKPYDTLEEIVGVR 128 (431)
T ss_dssp HHHHHHHHHHHHTTCSEEC---C-BTTSCSHHHHHHHHHHTTCCT-------------TCEEEECSSSCCTTHHHHTTSS
T ss_pred hHHHHHHHHHHHhCCCccc---c-cceeeCHHHHHHHHHHHhCCC-------------CCEEEEeCCCCchhHHHHHhhc
Confidence 3667888899999997521 1 122347799999998776432 57899888 89988886653
Q ss_pred --------hhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEec----CCCcccccCCHHHHHHHHHH--hhhccCCC
Q 018437 173 --------YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAIL----GSTLTGEFEDVKLLHDLLTK--KNEETGWD 238 (356)
Q Consensus 173 --------~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~----~~~~tG~~~~i~~I~~i~~~--~~~~~~~~ 238 (356)
..|++++.+|.+++ +.+|+++|++++++++++|+++. |++++|.+.|+++|.++|++ + +
T Consensus 129 g~~~~~~~~~G~~~~~v~~~~~-~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~------~ 201 (431)
T 3ht4_A 129 GKGVGSFKEYNIGYNAVPLTEG-GLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKP------D 201 (431)
T ss_dssp SCSSSCSGGGTCEEEECCBCTT-SSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCT------T
T ss_pred ccccchHHHcCCEEEEeCCCCC-CCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCC------C
Confidence 47999999999875 89999999999999999999996 55666667899999999999 9 9
Q ss_pred CcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCC---CcCeeEEEEe
Q 018437 239 TPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLV---YAGVGWVVWR 291 (356)
Q Consensus 239 ~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~---P~g~g~l~~~ 291 (356)
+++++|++|+.+..+ ..+.. .++|.++.++||++++ |.| |+++.+
T Consensus 202 ~~livDea~~~~~~~----~~~~~---~g~Di~~~S~sK~lgg~~~~~G-G~v~~~ 249 (431)
T 3ht4_A 202 VVVFVDNCYGEFIEE----QEPCH---VGADLMAGSLIKNPGGGIVKTG-GYIVGK 249 (431)
T ss_dssp CEEEEECTTCTTSSS----CCGGG---TTCSEEEEETTSGGGTTTCSSC-EEEEEC
T ss_pred CEEEEeCCChhhccC----CCccc---cCCeEEEcCccccCCCCCCCce-EEEEec
Confidence 999999999876541 11122 2689999999999654 677 888775
No 183
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.73 E-value=4.9e-17 Score=151.96 Aligned_cols=180 Identities=16% Similarity=0.090 Sum_probs=135.5
Q ss_pred CChHHHHHHHHHHhcc-cCCCcccCcchHHHHHHHHHHHHHHhC---CCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFN---TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQ 142 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g---~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~ 142 (356)
++++.+.+++.+.+.. ....|.. ++..+ +++.+++++| +++ ..+++|+|+++++..++.++
T Consensus 32 ~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~----lr~~la~~~~~~~~~~-----~~v~~~~G~~~al~~~~~~~----- 96 (335)
T 1uu1_A 32 PFPEDLVDEVFRRLNSDALRIYYD-SPDEE----LIEKILSYLDTDFLSK-----NNVSVGNGADEIIYVMMLMF----- 96 (335)
T ss_dssp CCCHHHHHHHHHTCCGGGGGSCCC-SSCHH----HHHHHHHHHTCSSCCG-----GGEEEESSHHHHHHHHHHHS-----
T ss_pred CCCHHHHHHHHHHhhhhhhhcCCC-CchHH----HHHHHHHHcCCCCCCH-----HHEEEcCChHHHHHHHHHHh-----
Confidence 3467888988887732 2222222 23344 4555777777 654 35899999999999988765
Q ss_pred HHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHH
Q 018437 143 QKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVK 222 (356)
Q Consensus 143 ~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~ 222 (356)
+++|+++ ++|..+...++..|++++.+|++++ +.+|+++| +++++|++++|+||||.+.|.+
T Consensus 97 -----------gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l-----~~~~~v~l~~p~nptG~~~~~~ 158 (335)
T 1uu1_A 97 -----------DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLTKD-LRIPEVNV-----GEGDVVFIPNPNNPTGHVFERE 158 (335)
T ss_dssp -----------SEEEECS-SSCHHHHHHHHHHTCEEEECCCCTT-SCCCCCCC-----CTTEEEEEESSCTTTCCCCCHH
T ss_pred -----------CCcEEEC-CCcHHHHHHHHHcCCeEEEeccCCC-CCCCHHHc-----CCCCEEEEeCCCCCCCCCCCHH
Confidence 2689999 9999999999999999999998764 78898877 5788999999999999999999
Q ss_pred HHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccc-ccCCCceEEEEcCCcCCC-CCcCeeEEEEe
Q 018437 223 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (356)
Q Consensus 223 ~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~Ds~~~~~hK~l~-~P~g~g~l~~~ 291 (356)
++.++++.+ + ++++|++|+.+.. .+ ... +...+.+.+..+++|+++ ....+|+++.+
T Consensus 159 ~l~~l~~~~------~-~li~De~~~~~~~---~~--~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~ 217 (335)
T 1uu1_A 159 EIERILKTG------A-FVALDEAYYEFHG---ES--YVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVAS 217 (335)
T ss_dssp HHHHHHHTT------C-EEEEECTTHHHHC---CC--CGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEEC
T ss_pred HHHHHHHhC------C-EEEEECcchhhcc---hh--HHHHhhhCCCEEEEecchhhcCCcccCeEEEEeC
Confidence 999999999 9 9999999986432 01 112 122345778889999975 33458999884
No 184
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.73 E-value=5.5e-17 Score=153.62 Aligned_cols=198 Identities=15% Similarity=0.062 Sum_probs=130.9
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
+++.+.+++.+.+.........++. ....++++++++++|++ ..+++|+||++|+..++.+++.... +
T Consensus 45 ~~~~v~~a~~~~~~~~~~~~~~y~~--~~~~~l~~~la~~~g~~------~~v~~~~g~t~a~~~~~~~~~~~~~--~-- 112 (375)
T 2eh6_A 45 AYPKLTEALKEQVEKLLHVSNLYEN--PWQEELAHKLVKHFWTE------GKVFFANSGTESVEAAIKLARKYWR--D-- 112 (375)
T ss_dssp SCHHHHHHHHHHHHHCSCCCTTBCC--HHHHHHHHHHHHTSSSC------EEEEEESSHHHHHHHHHHHHHHHHH--H--
T ss_pred CCHHHHHHHHHHHHhccccCcccCC--HHHHHHHHHHHhhcCCC------CeEEEeCchHHHHHHHHHHHHHHhc--c--
Confidence 4578888887776532111011221 12345677899999983 1389999999999999886532110 0
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHhhCCeeE----EEEecCCccc----cCHHHHHHHHhhCceEEEEecCCCcccccC
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELK----EVKLEEGYYV----MNPVKAVELVDENTICVAAILGSTLTGEFE 219 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~----~v~~~~~~~~----~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~ 219 (356)
+.+ ++++|+++.++|+.+...+..++.... ..|++.+ .. +|+++|++++++++++|+++.++|+||.+.
T Consensus 113 -~~~-g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~ 189 (375)
T 2eh6_A 113 -KGK-NKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPG-FSYAKLNDIDSVYKLLDEETAGIIIEVIQGEGGVNE 189 (375)
T ss_dssp -TTC-CCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSS-EEEECTTCHHHHHTTCCTTEEEEEECSEETTTTSEE
T ss_pred -CCC-CCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCC-ceeCCCchHHHHHHHhcCCeEEEEEeCccCCCCCcC
Confidence 000 126899999886655444433332210 0111111 11 589999999988899999999999999997
Q ss_pred C----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCC--CceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 220 D----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLP--LVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 220 ~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~--~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
| +++|.++|+++ ++++|+|++|+++.. . +. .+.+... ..|.+++| |++++|.++|++++++
T Consensus 190 ~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~--~-~~-~~~~~~~~~~~d~~s~S--K~~~~g~~~G~~~~~~ 256 (375)
T 2eh6_A 190 ASEDFLSKLQEICKEK------DVLLIIDEVQTGIGR--T-GE-FYAYQHFNLKPDVIALA--KGLGGGVPIGAILARE 256 (375)
T ss_dssp CCHHHHHHHHHHHHHH------TCEEEEECTTTTTTT--T-SS-SSGGGGGTCCCSEEEEC--GGGGTTSCCEEEEEEH
T ss_pred CCHHHHHHHHHHHHHh------CCEEEEeccccCCCC--C-Cc-chhhhhcCCCCCEEEEc--ccccCCCCeEEEEEcH
Confidence 7 99999999999 999999999986322 1 11 1122211 37888776 8877888999999875
No 185
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.73 E-value=1.4e-16 Score=152.02 Aligned_cols=197 Identities=10% Similarity=-0.041 Sum_probs=132.6
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.+.........++ .....++++++++++|.+ .+++|+||++|+..++.+++.+... .
T Consensus 53 ~~p~v~~a~~~~~~~~~~~~~~~~--~~~~~~l~~~la~~~g~~-------~v~~~~~gt~a~~~al~~~~~~~~~---~ 120 (392)
T 3ruy_A 53 RHPKIINALIDQANRVTLTSRAFH--SDQLGPWYEKVAKLTNKE-------MVLPMNTGAEAVETAIKTARRWAYD---V 120 (392)
T ss_dssp TCHHHHHHHHHHHTTCSCCCTTSE--ETTHHHHHHHHHHHHTCS-------EEEEESSHHHHHHHHHHHHHHHHHH---T
T ss_pred CCHHHHHHHHHHHHhccccccccC--CHHHHHHHHHHHHhcCCC-------EEEEeCcHHHHHHHHHHHHHHhhhh---c
Confidence 357888888887764332222122 233456777899999843 3899999999999999987654211 1
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHhhCCe-------------eEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCc
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVE-------------LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~-------------v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (356)
.|.+.++++|++..++|+.+...+..++.. +..++. .|+++|++++++++++|++++++||
T Consensus 121 ~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~l~~~~~~v~~~~~~np 194 (392)
T 3ruy_A 121 KKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY------GDLEALKAAITPNTAAFILEPIQGE 194 (392)
T ss_dssp SCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT------TCHHHHHHHCCTTEEEEEECSSBST
T ss_pred cCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc------ccHHHHHHHhccCeEEEEEeCccCC
Confidence 222223568999888886654444333211 222221 1899999999989999999999999
Q ss_pred ccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCC-cCeeEEE
Q 018437 215 TGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVGWVV 289 (356)
Q Consensus 215 tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~g~g~l~ 289 (356)
+|.+.| +++|.++|++| |+++|+|++|.++... ......+......|.+++| |.+.+. ...|+++
T Consensus 195 tG~~~~~~~~l~~i~~l~~~~------~~~li~De~~~~~~~~--g~~~~~~~~~~~~d~~~~S--K~l~gG~~~~G~~~ 264 (392)
T 3ruy_A 195 AGINIPPAGFLKEALEVCKKE------NVLFVADEIQTGLGRT--GKVFACDWDNVTPDMYILG--KALGGGVFPISCAA 264 (392)
T ss_dssp TTSBCCCTTHHHHHHHHHHTT------TCEEEEECTTTTTTTT--SSSSGGGGGTCCCSEEEEC--GGGGTTTSCCEEEE
T ss_pred CCCccCCHHHHHHHHHHHHHc------CCEEEEeechhCCCcc--ccchhhhccCCCCCEEEEc--hhhhCChhhhEEEE
Confidence 999988 99999999999 9999999999754321 1111112212246777775 986543 5589988
Q ss_pred EeC
Q 018437 290 WRT 292 (356)
Q Consensus 290 ~~~ 292 (356)
.++
T Consensus 265 ~~~ 267 (392)
T 3ruy_A 265 ANR 267 (392)
T ss_dssp ECH
T ss_pred ECH
Confidence 754
No 186
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.73 E-value=3.1e-17 Score=154.45 Aligned_cols=184 Identities=14% Similarity=0.056 Sum_probs=129.0
Q ss_pred hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhc
Q 018437 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (356)
+|.+.+++.+.+..+. +...+. ..++++++++++|.+. .++++||++|+..++.++..+
T Consensus 28 ~p~v~~ai~~~~~~~~--~~~~~~----~~~l~~~la~~~~~~~-------~i~~~~g~~a~~~a~~~~~~~-------- 86 (359)
T 3pj0_A 28 LTEALQNIDDNLESDI--YGNGAV----IEDFETKIAKILGKQS-------AVFFPSGTMAQQIALRIWADR-------- 86 (359)
T ss_dssp HHHHTTTSCTTCBCCB--TTBSHH----HHHHHHHHHHHHTCSE-------EEEESCHHHHHHHHHHHHHHH--------
T ss_pred CHHHHHHHHhhcccCc--ccCCHH----HHHHHHHHHHHhCCCc-------EEEeCCHHHHHHHHHHHHHhc--------
Confidence 4666666655433221 222233 3456667899999874 477799999999999888764
Q ss_pred CCCCCCC--eEEecCCCcchHHH---HHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcc-cccCCHH
Q 018437 149 GKPYDKP--NIVTGANVQVCWEK---FARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT-GEFEDVK 222 (356)
Q Consensus 149 g~~~~~~--~vi~s~~~h~s~~~---~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t-G~~~~i~ 222 (356)
++ .|+++.+.|++... .+...|++++.+|.+ ++.+|+++|+++ .+++++|+++.|+|++ |.+.|.+
T Consensus 87 -----g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~G~~~~~~ 158 (359)
T 3pj0_A 87 -----KENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGTA--NQLLTIDDIKSL-REPVSSVLIELPQREIGGQLPAFE 158 (359)
T ss_dssp -----HTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSCT--TSCCCHHHHHTC-SSCCSEEEEESSBGGGTSBCCCHH
T ss_pred -----CCCcEEEEeccceeeehhcchHHHhcCceEEecCCc--CCCcCHHHHHhc-cCCceEEEEEecccCCCcccCCHH
Confidence 23 36677777765532 224568898888873 489999999998 7789999999999998 6886655
Q ss_pred H---HHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEE
Q 018437 223 L---LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (356)
Q Consensus 223 ~---I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~ 290 (356)
+ |.++|+++ ++++|+|++|..+...+... ....+. .++|.+++++||++++|.| |+++.
T Consensus 159 ~l~~l~~~~~~~------~~~li~D~a~~~~~~~~~~~-~~~~~~-~~~d~~~~s~sK~~~~~~g-g~~~~ 220 (359)
T 3pj0_A 159 ELEKISEYCHEQ------GISLHLDGARLWEITPFYQK-SAEEIC-ALFDSVYVSFYKGIGGIAG-AILAG 220 (359)
T ss_dssp HHHHHHHHHHHH------TCEEEEEETTCGGGHHHHTC-CHHHHH-TTCSEEEEESSSTTCCSSC-EEEEE
T ss_pred HHHHHHHHHHHc------CCEEEEECcchhcchhhhCC-CHHHhh-ccCCEEEEeccccCCCcce-EEEEC
Confidence 5 59999999 99999999986543321111 111221 4679999999999888866 66654
No 187
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.73 E-value=8.4e-17 Score=153.80 Aligned_cols=193 Identities=11% Similarity=-0.072 Sum_probs=133.9
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.+.........+ ......++++.+++++|.+ .+++|+||++|+..++.+++.....
T Consensus 57 ~~~~v~~a~~~~~~~~~~~~~~~--~~~~~~~l~~~la~~~g~~-------~v~~~~gg~~a~~~al~~~~~~~~~---- 123 (397)
T 2ord_A 57 SHPRLVEAIKDQAEKLIHCSNLF--WNRPQMELAELLSKNTFGG-------KVFFANTGTEANEAAIKIARKYGKK---- 123 (397)
T ss_dssp TCHHHHHHHHHHHHHCSCCCTTS--EEHHHHHHHHHHHHTTTSC-------EEEEESSHHHHHHHHHHHHHHHHHH----
T ss_pred CCHHHHHHHHHHHHhcccCcccc--CCHHHHHHHHHHHHhcCCC-------eEEEeCCHHHHHHHHHHHHHHHhhc----
Confidence 35778888887775422111112 2345567788899998853 3899999999999999887642110
Q ss_pred cCCCCCCCeEEecCCCc-chHHHHHHhhCCe------------eEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCc
Q 018437 148 QGKPYDKPNIVTGANVQ-VCWEKFARYFEVE------------LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h-~s~~~~~~~~G~~------------v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (356)
+. .++++|+++++++ .++..+++..|.+ ++.+|. .|+++|++++++++++|+++.++||
T Consensus 124 -~~-~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~------~d~~~l~~~l~~~~~~v~~~~~~np 195 (397)
T 2ord_A 124 -KS-EKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF------NNVEDLRRKMSEDVCAVFLEPIQGE 195 (397)
T ss_dssp -HC-TTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT------TCHHHHHHHCCTTEEEEEECSEECT
T ss_pred -CC-CCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC------CCHHHHHHHhhcCeEEEEEecccCC
Confidence 00 0134677766554 5566577777765 555553 2899999999888999999999999
Q ss_pred ccc----cCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc--CCCceEEEEcCCcCCCCCcCeeEE
Q 018437 215 TGE----FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR--LPLVKSINVSGHKYGLVYAGVGWV 288 (356)
Q Consensus 215 tG~----~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~Ds~~~~~hK~l~~P~g~g~l 288 (356)
||. .+++++|.++|+++ |+++++|++|+++.. . .. ...+. ....|.+++ +|+++++.++|++
T Consensus 196 tG~~~~~~~~l~~l~~l~~~~------~~~li~De~~~~~~~--~-g~-~~~~~~~~~~~d~~s~--sK~~~~G~r~G~~ 263 (397)
T 2ord_A 196 SGIVPATKEFLEEARKLCDEY------DALLVFDEVQCGMGR--T-GK-LFAYQKYGVVPDVLTT--AKGLGGGVPIGAV 263 (397)
T ss_dssp TTCEECCHHHHHHHHHHHHHH------TCEEEEECTTTTTTT--T-SS-SSHHHHHTCCCSEEEE--CGGGGTTSCCEEE
T ss_pred CCcccCCHHHHHHHHHHHHHc------CCEEEEEecccCCcc--C-cc-chhhhhhCCCCCeeee--ccccCCCcCeEEE
Confidence 999 37899999999999 999999999986322 1 11 11111 113676654 7998877789999
Q ss_pred EEeCC
Q 018437 289 VWRTK 293 (356)
Q Consensus 289 ~~~~~ 293 (356)
+.+++
T Consensus 264 ~~~~~ 268 (397)
T 2ord_A 264 IVNER 268 (397)
T ss_dssp EECST
T ss_pred EEchH
Confidence 98654
No 188
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.72 E-value=1.8e-16 Score=152.56 Aligned_cols=229 Identities=13% Similarity=-0.013 Sum_probs=155.4
Q ss_pred HHHHHHHHhhhcCCCCcccccccC------CCChHHHHHHHHHHh-cc-cCCCcccCcchHHHHHHHHHHHHHHhCCCCC
Q 018437 42 AYQVINDELMLDGNPRLNLASFVT------TWMEPECDKLVMASI-NK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVA 113 (356)
Q Consensus 42 i~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~v~~~i~~~~-~~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~ 113 (356)
++..............+||+.+.+ .++++.+.++.. .+ +. ....|....|..++++++.+|+.+..+...+
T Consensus 16 i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~ 94 (405)
T 3k7y_A 16 ILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNLIFGNNSKYIE 94 (405)
T ss_dssp HHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHHHHCSSCTTTT
T ss_pred HHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHHHcCCCCcccc
Confidence 444444332222233357776642 123467777765 43 22 3345666778899999998888655443321
Q ss_pred CCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe-cCCccccCH
Q 018437 114 DDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL-EEGYYVMNP 192 (356)
Q Consensus 114 ~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~ 192 (356)
+ +...+++|+||++|+.+++.++.+- .. ++|++++|+|..+...++..|++++.+|+ +++++.+|+
T Consensus 95 ~-~~i~i~~t~G~~~al~~~~~~l~~~-----------~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 161 (405)
T 3k7y_A 95 D-KKICTIQCIGGTGAIFVLLEFLKML-----------NV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINY 161 (405)
T ss_dssp T-TCEEEEEEEHHHHHHHHHHHHHHTT-----------TC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEECH
T ss_pred c-cceEEEEcCchHHHHHHHHHHHHhc-----------CC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcCH
Confidence 1 1113589999999999998877541 12 78999999999999999999999999998 454589999
Q ss_pred HHHHHHHhh--CceEEEEecC-CCcccccC---CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCC-cc-ccc
Q 018437 193 VKAVELVDE--NTICVAAILG-STLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EW-DFR 264 (356)
Q Consensus 193 ~~L~~~i~~--~~~~v~~~~~-~~~tG~~~---~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~-~~~ 264 (356)
++|++++++ ++++++++.+ +||||.+- .+++|.++|+++ ++++++|++|..+...-..... .. .+.
T Consensus 162 ~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~------~~~vi~De~Y~~l~~~~~~~~~~~~~~~~ 235 (405)
T 3k7y_A 162 DLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHK------KHVIIFDIAYQGFGHTNLEEDVLLIRKFE 235 (405)
T ss_dssp HHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHH------CCEEEEEESCTTTSSSSTTGGGHHHHHHH
T ss_pred HHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHC------CeEEEEecCcccccCCCcccchHHHHHHH
Confidence 999999975 4577888776 89999984 467788999999 9999999999875431000000 00 111
Q ss_pred CCCce-EEEEcCCcCCC-CCcCeeEEEE
Q 018437 265 LPLVK-SINVSGHKYGL-VYAGVGWVVW 290 (356)
Q Consensus 265 ~~~~D-s~~~~~hK~l~-~P~g~g~l~~ 290 (356)
..+-. .+.-|+.|.++ ....+|++++
T Consensus 236 ~~~~~~i~~~S~SK~~~l~GlRiG~~~~ 263 (405)
T 3k7y_A 236 EKNIAFSVCQSFSKNMSLYGERAGALHI 263 (405)
T ss_dssp TTTCCEEEEEECTTTSCCTTTTEEEEEE
T ss_pred hcCCcEEEEeeCCccCCCccccceEEEE
Confidence 11122 33456899875 6789999864
No 189
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.72 E-value=2.9e-17 Score=154.56 Aligned_cols=162 Identities=14% Similarity=0.042 Sum_probs=119.0
Q ss_pred HHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH---HHHhhC
Q 018437 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK---FARYFE 175 (356)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~---~~~~~G 175 (356)
++++++++++|.+. .++++||++|+..++.++..+. +++.|+++.+.|++... .+...|
T Consensus 51 ~l~~~la~~~~~~~-------~i~~~~G~~a~~~al~~~~~~g-----------d~~~vi~~~~~~~~~~~~~~~~~~~g 112 (357)
T 3lws_A 51 PFEQKFADVLGMDD-------AVFFPSGTMAQQVALRIWSDET-----------DNRTVAYHPLCHLEIHEQDGLKELHP 112 (357)
T ss_dssp HHHHHHHHHHTCSE-------EEEESCHHHHHHHHHHHHHHHH-----------TCCEEEECTTCHHHHSSTTHHHHHSS
T ss_pred HHHHHHHHHhCCCc-------EEEecCcHHHHHHHHHHHhhcC-----------CCcEEEecccceeeeeccchhhhccC
Confidence 44456888889864 5777899999999998877641 01278888888877544 345568
Q ss_pred CeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcc-cccCC---HHHHHHHHHHhhhccCCCCcEEEeccccccc
Q 018437 176 VELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT-GEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFI 251 (356)
Q Consensus 176 ~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t-G~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~ 251 (356)
++++.+|.+ ++.+|+++|+++. ++++|+++.|+||+ |.+.+ +++|.++|+++ |+++|+|++|....
T Consensus 113 ~~~~~v~~~--~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~------~~~li~D~a~~~~~ 182 (357)
T 3lws_A 113 IETILVGAA--DRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRER------GIRLHLDGARLFEM 182 (357)
T ss_dssp CEEEECSCT--TSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHT------TCEEEEEETTHHHH
T ss_pred cEEEEecCC--CCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHHc------CCEEEEECchhhhh
Confidence 888777743 4789999999984 38899999999998 88754 89999999999 99999999986322
Q ss_pred ccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEe
Q 018437 252 APFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 252 ~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~ 291 (356)
..+... ....+. ..+|.++.++||++.+|.| |+++.+
T Consensus 183 ~~~~~~-~~~~~~-~~~d~~~~s~sK~~~~~~g-g~~~~~ 219 (357)
T 3lws_A 183 LPYYEK-TAAEIA-GLFDSIYISFYKGLGGIAG-AILAGP 219 (357)
T ss_dssp HHHHTC-CHHHHH-TTSSEEEEESSSTTCCSSC-EEEEEC
T ss_pred hhhcCC-ChHHHH-hcCCEEEEeccccCCCCce-EEEEcC
Confidence 221111 111121 3578889999999888888 877653
No 190
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.71 E-value=3.3e-17 Score=157.48 Aligned_cols=154 Identities=13% Similarity=-0.015 Sum_probs=117.9
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHH-----H
Q 018437 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA-----R 172 (356)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~-----~ 172 (356)
.++.+.+++++|.+. .+++++|++|+.. +.++.+ .+++|+++.+.|......+ .
T Consensus 70 ~~l~~~la~l~g~~~-------~~~~~sG~~Ai~~-~~~l~~-------------~gd~Vi~~~~~y~~~~~~~~~~~~~ 128 (400)
T 3nmy_A 70 FAYERCVAALEGGTR-------AFAFASGMAATST-VMELLD-------------AGSHVVAMDDLYGGTFRLFERVRRR 128 (400)
T ss_dssp HHHHHHHHHHHTCSE-------EEEESSHHHHHHH-HHTTSC-------------TTCEEEEESSCCHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHhCCCC-------EEEecCHHHHHHH-HHHHcC-------------CCCEEEEeCCCchHHHHHHHHhhHh
Confidence 345556889998763 6778888999876 333322 1578999999998554443 3
Q ss_pred hhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccc
Q 018437 173 YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA 252 (356)
Q Consensus 173 ~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~ 252 (356)
..|++++.++.+ |+++|++++++++++|++..++||+|.+.|+++|.++|+++ |+++++|++|+.+..
T Consensus 129 ~~g~~~~~v~~~------d~~~l~~~i~~~~~~v~~e~~~np~G~~~~l~~i~~la~~~------g~~livDe~~~~~~~ 196 (400)
T 3nmy_A 129 TAGLDFSFVDLT------DPAAFKAAIRADTKMVWIETPTNPMLKLVDIAAIAVIARKH------GLLTVVDNTFASPML 196 (400)
T ss_dssp HHCCEEEEECTT------SHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHT------TCEEEEECTTTHHHH
T ss_pred hcCeEEEEECCC------CHHHHHHHhccCCCEEEEECCCCCCCeeecHHHHHHHHHHc------CCEEEEECCCccccc
Confidence 358988888764 78999999999999999999999999999999999999999 999999999986443
Q ss_pred cccCCCCcccccCCCceEEEEcCCcCCCCCc-C-ee-EEEEeC
Q 018437 253 PFLYPDLEWDFRLPLVKSINVSGHKYGLVYA-G-VG-WVVWRT 292 (356)
Q Consensus 253 ~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~-g-~g-~l~~~~ 292 (356)
.. +.. .++|.++.|.+|++++|. . .| +++.++
T Consensus 197 --~~---~~~---~g~div~~S~sK~l~g~g~~~gG~~vv~~~ 231 (400)
T 3nmy_A 197 --QR---PLS---LGADLVVHSATKYLNGHSDMVGGIAVVGDN 231 (400)
T ss_dssp --CC---GGG---GTCSEEEEETTTTTTCSSSCCCEEEEECSC
T ss_pred --CC---hhh---cCCcEEEecCccccCCCCCcceeEEEEeCC
Confidence 11 122 278999999999998773 2 35 444444
No 191
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.71 E-value=4e-16 Score=149.37 Aligned_cols=217 Identities=13% Similarity=0.040 Sum_probs=143.3
Q ss_pred HHHHHHHHHHHhhhc-CCCCcccccccCC-CChHHHHHHHHHHhccc-----CCCcccCcchHHHHHHHHHHHHHH--hC
Q 018437 39 KEAAYQVINDELMLD-GNPRLNLASFVTT-WMEPECDKLVMASINKN-----YVDMDEYPVTTELQNRCVNMIAHL--FN 109 (356)
Q Consensus 39 ~~~i~~~~~~~~~~~-~~~~~~l~~~~~~-~~~~~v~~~i~~~~~~~-----~~~~~~~~~~~~le~~~~~~la~l--~g 109 (356)
.+++.+........+ +...++|..+.++ ++++.+.+++.+.+... ...|....+..+++++ ++++ .|
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~----la~~l~~g 91 (400)
T 3asa_A 16 FADLQKRVAQFRLENPQHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQK----LSEDFYRG 91 (400)
T ss_dssp HHHHHHHHHHHHHHCTTSCCEECSSCCCCCCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHH----HHHTTSTT
T ss_pred HHHHHHHHHHhhhhcCCCceEeccCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHH----HHHHHHcC
Confidence 455555555443333 2333455555443 34577888887766431 1223333455566655 5555 47
Q ss_pred -CCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCe-eEEEEecCC-
Q 018437 110 -TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE-LKEVKLEEG- 186 (356)
Q Consensus 110 -~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~-v~~v~~~~~- 186 (356)
+++ ..+++|+|+++++..++..+ . .+++|+++.++|..+...++..|++ ++.+|++++
T Consensus 92 ~~~~-----~~v~~~~G~~~al~~~~~~~-~-------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 152 (400)
T 3asa_A 92 FVDA-----KEIFISDGAKVDLFRLLSFF-G-------------PNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQEN 152 (400)
T ss_dssp SSCG-----GGEEEESCHHHHHHHHHHHH-C-------------SSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGG
T ss_pred CCCH-----HHEEEccChHHHHHHHHHHc-C-------------CCCEEEECCCCcHHHHHHHHHcCCcceEecccchhc
Confidence 443 35899999999988754322 1 1468999999999999999999999 999998742
Q ss_pred ccccCHHHHHHHHhhCceEEEEecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccc
Q 018437 187 YYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF 263 (356)
Q Consensus 187 ~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~ 263 (356)
.+..|++ + + +++++|++++|+||||.+.| +++|.++|+++ ++++++|++|+.+... +.....+
T Consensus 153 ~~~~~l~---~-~-~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~------~~~li~De~~~~~~~~---~~~~~~~ 218 (400)
T 3asa_A 153 AFFPEFP---E-D-THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEH------EILILFDAAYSTFISD---PSLPKSI 218 (400)
T ss_dssp TTCCCCC---T-T-CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHT------TCEEEEECTTGGGCCC---TTSCSSG
T ss_pred CcccChh---h-c-cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHc------CCEEEEEchhhhhhcC---CCCCCch
Confidence 2344432 2 1 56889999999999999976 56788999999 9999999999865431 1111222
Q ss_pred c-CC---CceEEEEcCCcCCC-CCcCeeEEEEeC
Q 018437 264 R-LP---LVKSINVSGHKYGL-VYAGVGWVVWRT 292 (356)
Q Consensus 264 ~-~~---~~Ds~~~~~hK~l~-~P~g~g~l~~~~ 292 (356)
. .. ..+.+..+++|+++ ....+|+++.++
T Consensus 219 ~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~ 252 (400)
T 3asa_A 219 FEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQ 252 (400)
T ss_dssp GGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCT
T ss_pred hhCCCCCCceEEEecchhhcCCcchheeEEeeCh
Confidence 1 22 23477788999875 334589998754
No 192
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.71 E-value=5.5e-17 Score=155.51 Aligned_cols=158 Identities=19% Similarity=0.061 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHH----HHH
Q 018437 97 QNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK----FAR 172 (356)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~----~~~ 172 (356)
.+++++.+++++|.+. .+++++|++|+..++. +.++ +++|+++.++|.+... .++
T Consensus 57 ~~~lr~~la~~~g~~~-------~i~~~sGt~a~~~al~-~~~~-------------gd~Vi~~~~~y~~~~~~~~~~~~ 115 (393)
T 1n8p_A 57 RENLERAVAALENAQY-------GLAFSSGSATTATILQ-SLPQ-------------GSHAVSIGDVYGGTHRYFTKVAN 115 (393)
T ss_dssp HHHHHHHHHHHTTCSE-------EEEESCHHHHHHHHHH-TSCS-------------SCEEEEESSCCHHHHHHHHHTST
T ss_pred HHHHHHHHHHHhCCCc-------EEEECChHHHHHHHHH-HcCC-------------CCEEEEeCCCchHHHHHHHHHHH
Confidence 4467777999999863 5667777999999988 5321 4789999999985444 455
Q ss_pred hhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccc
Q 018437 173 YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA 252 (356)
Q Consensus 173 ~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~ 252 (356)
..|++++.+|++ | ++|++++++++++|++++++||+|.+.|+++|.++|++++. +.++++|+|++|+.+..
T Consensus 116 ~~G~~v~~v~~~------d-~~l~~~i~~~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~--~~~~~livD~a~~~~~~ 186 (393)
T 1n8p_A 116 AHGVETSFTNDL------L-NDLPQLIKENTKLVWIETPTNPTLKVTDIQKVADLIKKHAA--GQDVILVVDNTFLSPYI 186 (393)
T ss_dssp TTCSCCEEESSH------H-HHHHHHSCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTT--TTTCEEEEECTTTHHHH
T ss_pred HcCcEEEEeCCC------h-HHHHHhcccCceEEEEECCCCCcceecCHHHHHHHHHHhCC--CCCCEEEEeCCcccccc
Confidence 679999998875 6 89999999899999999999999999999999999999821 11699999999987654
Q ss_pred cccCCCCcccccCCCceEEEEcCCcCCCCCcC--e-eEEEEeCC
Q 018437 253 PFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--V-GWVVWRTK 293 (356)
Q Consensus 253 ~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g--~-g~l~~~~~ 293 (356)
. + ... .++|.++.++||+++ |.| . |+++.+++
T Consensus 187 ~----~-~~~---~~~di~~~S~sK~~g-~~G~rigG~~~~~~~ 221 (393)
T 1n8p_A 187 S----N-PLN---FGADIVVHSATKYIN-GHSDVVLGVLATNNK 221 (393)
T ss_dssp C----C-GGG---GTCSEEEEETTTTTT-CSSCCCCEEEEESCH
T ss_pred C----C-HHH---cCCeEEEEECccccc-CCCCceeEEEEeCCH
Confidence 1 1 122 268999999999874 555 5 88877543
No 193
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.69 E-value=6.3e-16 Score=147.88 Aligned_cols=193 Identities=14% Similarity=-0.012 Sum_probs=129.9
Q ss_pred hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhc
Q 018437 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (356)
+|.+.+++.+.+.........++ .....++++++++++|.+. +++|+||++|+..++.+++..+...
T Consensus 57 ~p~v~~a~~~~~~~~~~~~~~~~--~~~~~~l~~~la~~~~~~~-------v~~~~gg~~a~~~al~~~~~~~~~~---- 123 (406)
T 4adb_A 57 HPELREALNEQASKFWHTGNGYT--NEPVLRLAKKLIDATFADR-------VFFCNSGAEANEAALKLARKFAHDR---- 123 (406)
T ss_dssp CHHHHHHHHHHHTTCSCCCTTSC--CHHHHHHHHHHHHHSSCSE-------EEEESSHHHHHHHHHHHHHHHHHHH----
T ss_pred CHHHHHHHHHHHHhcccccCCcC--CHHHHHHHHHHHhhCCCCe-------EEEeCcHHHHHHHHHHHHHHHHHhc----
Confidence 57888888887765322222222 2345678888999998753 8999999999999999886532211
Q ss_pred CCCCCCCeEEecCCCcchHHHHHHhhCC-------------eeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcc
Q 018437 149 GKPYDKPNIVTGANVQVCWEKFARYFEV-------------ELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (356)
Q Consensus 149 g~~~~~~~vi~s~~~h~s~~~~~~~~G~-------------~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~t 215 (356)
|. .++++|++++++|+.+...+..++. ++..+|. .|+++|++++++++++|+++ |+|++
T Consensus 124 ~~-~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~l~~~~~~v~~~-p~np~ 195 (406)
T 4adb_A 124 YG-SHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY------NDINSASALIDDSTCAVIVE-PIQGE 195 (406)
T ss_dssp TC-TTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT------TCHHHHHTTCSTTEEEEEEC-SEETT
T ss_pred CC-CCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC------CcHHHHHHHhcCCeEEEEEe-CCcCC
Confidence 10 1136788877777665444443333 2222221 48999999999889998888 99999
Q ss_pred ccc-----CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEE
Q 018437 216 GEF-----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (356)
Q Consensus 216 G~~-----~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~ 290 (356)
|.+ +++++|.++|++| |+++|+|++|+++.. .......+......|.+++ +|+++++..+|+++.
T Consensus 196 g~~~~~~~~~l~~l~~l~~~~------~~~li~De~~~~~~~--~g~~~~~~~~~~~~d~~t~--sK~~~~G~r~G~~~~ 265 (406)
T 4adb_A 196 GGVVPASNAFLQGLRELCNRH------NALLIFDEVQTGVGR--TGELYAYMHYGVTPDLLTT--AKALGGGFPVGALLA 265 (406)
T ss_dssp TTSEECCHHHHHHHHHHHHHT------TCEEEEECTTTTTTT--TSSSSHHHHHTCCCSEEEE--CGGGGTTSCCEEEEE
T ss_pred CCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--cchhHHHHhcCCCCCEEEe--chhhcCCCCeEEEEE
Confidence 965 4799999999999 999999999986432 1111111111224577754 999875566999877
Q ss_pred eC
Q 018437 291 RT 292 (356)
Q Consensus 291 ~~ 292 (356)
++
T Consensus 266 ~~ 267 (406)
T 4adb_A 266 TE 267 (406)
T ss_dssp CH
T ss_pred cH
Confidence 54
No 194
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.69 E-value=6.7e-16 Score=144.94 Aligned_cols=192 Identities=15% Similarity=0.008 Sum_probs=140.1
Q ss_pred CCcccccccCC-CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHH
Q 018437 56 PRLNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (356)
Q Consensus 56 ~~~~l~~~~~~-~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al 134 (356)
..++|....+. ++++.+.+++.+.+... ..|..... . ++++++++++|+++ ..+++|+|+++++..++
T Consensus 16 ~~id~~~~~~~~~~~~~v~~a~~~~~~~~-~~y~~~~~-~----~lr~~la~~~~~~~-----~~i~~t~g~~~al~~~~ 84 (350)
T 3fkd_A 16 EIVNFSTTVWTDGDKDHLEKHLVENLNCI-RHYPEPDA-G----TLRQMLAKRNSVDN-----NAILVTNGPTAAFYQIA 84 (350)
T ss_dssp CCEECSCCSCCCSCCHHHHHHHHHTGGGG-GSCCCTTC-H----HHHHHHHHHTTCCG-----GGEEEESHHHHHHHHHH
T ss_pred cEEEccCCCCCCCCCHHHHHHHHHhHhHH-hcCCCCcH-H----HHHHHHHHHhCcCH-----HHEEEcCCHHHHHHHHH
Confidence 33344444333 34578888888777432 22222222 2 56677899999875 34899999999999998
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe-cCCccccCHHHHHHHHhhCceEEEEecCCC
Q 018437 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL-EEGYYVMNPVKAVELVDENTICVAAILGST 213 (356)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~ 213 (356)
.++. +++|+++.++|..+...++..|++++.+|+ ++. ..+++ +++++|++++|+|
T Consensus 85 ~~l~---------------gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~~--------~~~~~v~i~~p~n 140 (350)
T 3fkd_A 85 QAFR---------------GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDI-GEADF--------SNMDFCWLCNPNN 140 (350)
T ss_dssp HHTT---------------TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCG-GGSCC--------TTCSEEEEESSCT
T ss_pred HHHC---------------CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCcc-ccCcc--------CCCCEEEEeCCCC
Confidence 8763 378999999999999999999999999999 652 34444 5788999999999
Q ss_pred cccccCCHHHHHHHHHHhhhccCCC-CcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCC-CCcCeeEEEE
Q 018437 214 LTGEFEDVKLLHDLLTKKNEETGWD-TPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVW 290 (356)
Q Consensus 214 ~tG~~~~i~~I~~i~~~~~~~~~~~-~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~-~P~g~g~l~~ 290 (356)
|||.+.|+++|.++++.+ + .++++|++|+.+... .......+.....+.+..|++|+++ .+.++|+++.
T Consensus 141 ptG~~~~~~~l~~l~~~~------~~~~li~Dea~~~~~~~--~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~ 211 (350)
T 3fkd_A 141 PDGRLLQRTEILRLLNDH------PDTTFVLDQSYVSFTTE--EVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVA 211 (350)
T ss_dssp TTCCCCCHHHHHHHHHHC------TTSEEEEECTTTTSCSS--CCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEEC
T ss_pred CcCCCCCHHHHHHHHHhC------CCCEEEEECchhhhccC--cchhhHHhhcCCCEEEEecCchhccCcchheEeEEe
Confidence 999999999999999998 4 699999999865431 1111122223345677788999875 4567899887
No 195
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.68 E-value=5.4e-16 Score=151.34 Aligned_cols=199 Identities=13% Similarity=0.088 Sum_probs=127.1
Q ss_pred HHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcC
Q 018437 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQG 149 (356)
Q Consensus 70 ~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g 149 (356)
+.+.+++.+.+......|...++..++ ++++++++|.+. +++|+|||+|+..++.+++++.... .|
T Consensus 53 ~~v~~a~~~~l~~~~~~y~~~~~~~~l----~~~la~~~~~~~-------v~~t~~gt~A~~~al~~~~~~~~~~---~G 118 (467)
T 2oqx_A 53 GAVTQSMQAAMMRGDEAYSGSRSYYAL----AESVKNIFGYQY-------TIPTHQGRGAEQIYIPVLIKKREQE---KG 118 (467)
T ss_dssp SCCCHHHHHHTTSCCCCSSSCHHHHHH----HHHHHHHHCCSE-------EEEEC--CCSHHHHHHHHHHHHHHH---HC
T ss_pred HHHHHHHHHHhccCcceeccCchhHHH----HHHHHHHhCcCc-------EEEcCCcHHHHHHHHHHHhcccccc---CC
Confidence 566777777765433334444444444 556888888753 8999999999999999987641110 12
Q ss_pred CCCCCCeEEecCCCcch-HHHHHHhhCCeeEEE------Eec---CCccccCHHHHHHHHhh----CceEEEEecCCCcc
Q 018437 150 KPYDKPNIVTGANVQVC-WEKFARYFEVELKEV------KLE---EGYYVMNPVKAVELVDE----NTICVAAILGSTLT 215 (356)
Q Consensus 150 ~~~~~~~vi~s~~~h~s-~~~~~~~~G~~v~~v------~~~---~~~~~~d~~~L~~~i~~----~~~~v~~~~~~~~t 215 (356)
.+ ++++|+++ ..|+. +.......|+.+... +.+ +.++.+|+++|++++++ ++++|+++.++|++
T Consensus 119 ~~-~~d~Ii~~-~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~ 196 (467)
T 2oqx_A 119 LD-RSKMVAFS-NYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSA 196 (467)
T ss_dssp CC-TTTCEEEE-SSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGG
T ss_pred CC-ccceEEec-ccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCC
Confidence 10 00557766 56744 444445556655443 222 12478999999999984 78999999999998
Q ss_pred -ccc---CCHHHHHHHHHHhhhccCCCCcEEEeccccc-ccc-------cccCCCCccccc---CCCceEEEEcCCcCCC
Q 018437 216 -GEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGG-FIA-------PFLYPDLEWDFR---LPLVKSINVSGHKYGL 280 (356)
Q Consensus 216 -G~~---~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~-~~~-------~~~~~~~~~~~~---~~~~Ds~~~~~hK~l~ 280 (356)
|.+ +++++|.++|++| |+++|+|++++. ... .+ .+.....+. ...+|.+++++||+++
T Consensus 197 gG~~~~~~~l~~i~~la~~~------gi~li~D~a~~~e~~~~~~~~~~~~-~g~~~~~~~~~~~~~~d~~~~s~sK~~g 269 (467)
T 2oqx_A 197 GGQPVSLANLKAMYSIAKKY------DIPVVMDSARFAENAYFIKQREAEY-KDWTIEQITRETYKYADMLAMSAKKDAM 269 (467)
T ss_dssp GCBCCCHHHHHHHHHHHHHT------TCCEEEECTTHHHHHHHHHHHCGGG-TTSCHHHHHHHHGGGCSEEEEESSSTTC
T ss_pred CCccCCHHHHHHHHHHHHHc------CCEEEEEchhhhhhhhhcccccccc-cCccHHHHhhhhhccCCeEEEecccccC
Confidence 665 5688999999999 999999988754 221 11 111111111 1347888999999997
Q ss_pred CCcCeeEEEEeC
Q 018437 281 VYAGVGWVVWRT 292 (356)
Q Consensus 281 ~P~g~g~l~~~~ 292 (356)
.|.| |+++.++
T Consensus 270 ~~~G-g~~~~~~ 280 (467)
T 2oqx_A 270 VPMG-GLLCMKD 280 (467)
T ss_dssp CSSC-EEEEECS
T ss_pred CCCc-eEEEecC
Confidence 7755 6666544
No 196
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.68 E-value=2.5e-16 Score=151.17 Aligned_cols=234 Identities=15% Similarity=0.032 Sum_probs=147.3
Q ss_pred HHHHHHHHHhhhcCCCCcccccccC-CC-ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCC
Q 018437 41 AAYQVINDELMLDGNPRLNLASFVT-TW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTA 118 (356)
Q Consensus 41 ~i~~~~~~~~~~~~~~~~~l~~~~~-~~-~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~ 118 (356)
.++..............++|+.+.+ .. .++.+.+++.++.......|....+..++++++.+++ .|.+.......
T Consensus 27 ~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a~~~a~~~~~~~y~~~~g~~~lr~~ia~~~---~~~~~~~~~~~ 103 (409)
T 4eu1_A 27 PILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQATLGTNMDYAPVTGIASFVEEAQKLC---FGPTCAALRDG 103 (409)
T ss_dssp CHHHHHHHHHHCCCSSCEECCCSSCCCTTSCCCCCHHHHTCCCCSCCCCCCTTCCHHHHHHHHHHH---HCSSCHHHHTT
T ss_pred hHHHHHHHHhhCCCcCceeeeeeEEECCCCCEeecHHHHhcCccccccCCCCCCcHHHHHHHHHHH---cCCCchhhccC
Confidence 3554444332222223356666554 32 2344566666554333344555567777887766665 35541000001
Q ss_pred Ce--EEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec-CCccccCHHHH
Q 018437 119 VG--VGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKA 195 (356)
Q Consensus 119 ~~--~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~L 195 (356)
.+ ..|.||++++..+...++.- ...+++|+++.++|..+...++..|++++.+|++ ++++.+|+++|
T Consensus 104 ~i~~~~~~~g~ga~~~~~~~~~~~----------~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 173 (409)
T 4eu1_A 104 RIASCQTLGGTGALRIGGDLLNRF----------VANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGM 173 (409)
T ss_dssp CEEEEEESHHHHHHHHHHHHGGGT----------SSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHHH
T ss_pred ceeeeecccchHHHHHHHHHHHHh----------cCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHH
Confidence 23 45899999988765544321 1124799999999999999999999999999983 34589999999
Q ss_pred HHHHhh---CceEEEEecCCCcccccCC---HHHHHHHHHHhhhccCCCCcEEEecccccccccccC-CCCc-ccccCCC
Q 018437 196 VELVDE---NTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY-PDLE-WDFRLPL 267 (356)
Q Consensus 196 ~~~i~~---~~~~v~~~~~~~~tG~~~~---i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~-~~~~-~~~~~~~ 267 (356)
++++++ +++++++++|+||||.+.+ +++|.++|+++ ++++++|++|+++...-.. +... ..+....
T Consensus 174 ~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~------~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~ 247 (409)
T 4eu1_A 174 LECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRR------NHIPFVDMAYQGFATGQLDYDAFVPRHLVDMV 247 (409)
T ss_dssp HHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHT------TCEEEEEESCTTTTTSCHHHHTHHHHHHHTTS
T ss_pred HHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhC------CcEEEEeccccccccCCcccchHHHHHHHhhC
Confidence 999963 4567777999999999966 55599999999 9999999999876531000 0000 0111112
Q ss_pred ce-EEEEcCCcCCC-CCcCeeEE--EEeCC
Q 018437 268 VK-SINVSGHKYGL-VYAGVGWV--VWRTK 293 (356)
Q Consensus 268 ~D-s~~~~~hK~l~-~P~g~g~l--~~~~~ 293 (356)
.+ .+..+..|.++ ....+|++ ++.++
T Consensus 248 ~~~i~~~S~SK~~g~~G~riG~~~~v~~~~ 277 (409)
T 4eu1_A 248 PNLIVAQSFSKNFGLYGHRCGALHISTASA 277 (409)
T ss_dssp SCCEEEEECTTTSSCGGGCCEEEEEECSSH
T ss_pred CcEEEEecCcccccCccCCceEEEEEeCCH
Confidence 23 34456889875 34567887 55543
No 197
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.67 E-value=8.9e-16 Score=148.16 Aligned_cols=212 Identities=15% Similarity=0.033 Sum_probs=139.5
Q ss_pred CcccccccCC----CChHHHHHHHHHHh-c-c--cCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhH
Q 018437 57 RLNLASFVTT----WMEPECDKLVMASI-N-K--NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (356)
Q Consensus 57 ~~~l~~~~~~----~~~~~v~~~i~~~~-~-~--~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~ 128 (356)
.++|+.+.+. ++++.+.+++.+.+ . . ....|....+..++++. +++++|+++ ..+++|+|+++
T Consensus 34 ~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~----ia~~~~~~~-----~~i~~t~G~~~ 104 (422)
T 3d6k_A 34 SLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIREL----WAEALGLPA-----DLVVAQDGSSL 104 (422)
T ss_dssp CEECCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHH----HHHHHTCCG-----GGEEECSSCHH
T ss_pred eEeCCCCCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHH----HHHHhCCCh-----hHEEEecchHH
Confidence 4566666554 22235555554332 1 1 12234444455566555 666668875 34899999999
Q ss_pred HH--HHHHHHHHHHHHHHHHhcCCCC----CCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh-
Q 018437 129 AI--MLAGLAFKRKWQQKRKEQGKPY----DKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE- 201 (356)
Q Consensus 129 a~--~~al~~~~~~~~~~~~~~g~~~----~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~- 201 (356)
++ .+++.++...+ ..|... ++++|+++.++|..+...++..|++++.+|++++ + +|+++|++++++
T Consensus 105 al~l~~~~~~l~~~~-----~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-g-~d~~~l~~~l~~~ 177 (422)
T 3d6k_A 105 NIMFDLISWSYTWGN-----NDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDE-G-PDMGVVRELVKDP 177 (422)
T ss_dssp HHHHHHHHHHHHHCC-----TTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT-E-ECHHHHHHHHTST
T ss_pred HHHHHHHHHHhcCcc-----cccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCCC-C-CCHHHHHHHHhcC
Confidence 97 34444443200 000000 1247999999999999999999999999999874 4 999999999985
Q ss_pred CceEEE-EecCCCcccccCCHH---HHHHHHH-HhhhccCCCCcEEEeccccc--ccccccCCCCcc-cc----cCCCce
Q 018437 202 NTICVA-AILGSTLTGEFEDVK---LLHDLLT-KKNEETGWDTPIHVDAASGG--FIAPFLYPDLEW-DF----RLPLVK 269 (356)
Q Consensus 202 ~~~~v~-~~~~~~~tG~~~~i~---~I~~i~~-~~~~~~~~~~~l~vD~a~~~--~~~~~~~~~~~~-~~----~~~~~D 269 (356)
++++|+ +++++||||.+.+.+ +|.++|+ ++ ++++|+|++|+. +... -.+.... ++ .....+
T Consensus 178 ~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~------~~~li~De~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 250 (422)
T 3d6k_A 178 QVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAP------DFRIVWDNAYALHTLSDE-FPIVHNVIEFAQAAGNPNRF 250 (422)
T ss_dssp TEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSST------TCEEEEECTTTTCBSSSC-CCCCCCHHHHHHHTTCTTCE
T ss_pred CCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhcc------CCEEEEECCccccccCCC-CCCCcChhhHhhccCCCCcE
Confidence 778877 689999999998776 7777777 88 999999999974 2210 0000111 11 123456
Q ss_pred EEEEcCCcCCCCCcCeeEEEEe
Q 018437 270 SINVSGHKYGLVYAGVGWVVWR 291 (356)
Q Consensus 270 s~~~~~hK~l~~P~g~g~l~~~ 291 (356)
.+..+++|+++....+|+++.+
T Consensus 251 i~~~S~SK~~~~GlriG~~~~~ 272 (422)
T 3d6k_A 251 WFMSSTSKITHAGSGVSFFASS 272 (422)
T ss_dssp EEEEESTTTSCTTSSCEEEECC
T ss_pred EEEcChhhhcCcccceEEEEeC
Confidence 7777899995554679999875
No 198
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.67 E-value=5.3e-15 Score=142.88 Aligned_cols=202 Identities=11% Similarity=-0.025 Sum_probs=130.2
Q ss_pred ChHHHHHHHHHHhcccCCCc-ccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 68 MEPECDKLVMASINKNYVDM-DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~-~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
.+|.+.+++.+.+....... ..++ .....++++.+++++|++. ..+++|+||++|+..++.+++.....
T Consensus 60 ~~p~v~~a~~~~~~~~~~~~~~~~~--~~~~~~l~~~la~~~~~~~-----~~v~~~~ggtea~~~ai~~~~~~~~~--- 129 (429)
T 1s0a_A 60 NHPQLNAAMKSQIDAMSHVMFGGIT--HAPAIELCRKLVAMTPQPL-----ECVFLADSGSVAVEVAMKMALQYWQA--- 129 (429)
T ss_dssp SCHHHHHHHHHHHHHCSCCCCSSEE--CHHHHHHHHHHHHHSCTTC-----CEEEEESSHHHHHHHHHHHHHHHHHH---
T ss_pred CCHHHHHHHHHHHHhcccccccccC--CHHHHHHHHHHHHhCCCCC-----CEEEEeCCHHHHHHHHHHHHHHHhcc---
Confidence 35788888888775432211 1222 2234466777999998764 34899999999999999877532110
Q ss_pred hcCCCCCCCeEEecCCCcch-HHHHHHhhC-------------CeeEEEEecC-----CccccCHHHHHHHHh---hCce
Q 018437 147 EQGKPYDKPNIVTGANVQVC-WEKFARYFE-------------VELKEVKLEE-----GYYVMNPVKAVELVD---ENTI 204 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~h~s-~~~~~~~~G-------------~~v~~v~~~~-----~~~~~d~~~L~~~i~---~~~~ 204 (356)
+|. .+++|+++.++|+. ...++...| .+++.++++. ..+.+|+++|+++++ ++++
T Consensus 130 -~g~--~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 206 (429)
T 1s0a_A 130 -KGE--ARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIA 206 (429)
T ss_dssp -HTC--CCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEE
T ss_pred -cCC--CCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCCCEE
Confidence 111 14578888876543 332332212 1466677642 113689999999997 3555
Q ss_pred EEEEecC-CCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCC
Q 018437 205 CVAAILG-STLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG 279 (356)
Q Consensus 205 ~v~~~~~-~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l 279 (356)
+|+++.. +|++|.+.+ +++|.++|+++ |+++|+|++|.++.. .......+......|.++++ |++
T Consensus 207 ~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~------~~~li~De~~~~~g~--~g~~~~~~~~~~~~d~~t~s--K~l 276 (429)
T 1s0a_A 207 AVIIEPIVQGAGGMRMYHPEWLKRIRKICDRE------GILLIADEIATGFGR--TGKLFACEHAEIAPDILCLG--KAL 276 (429)
T ss_dssp EEEECSSEECTTTCEEBCTHHHHHHHHHHHHH------TCEEEEECTTTTTTT--TSSSSGGGGGTCCCSEEEEC--GGG
T ss_pred EEEEeecccCCCCcccCCHHHHHHHHHHHHHc------CCEEEEeehhhCCcc--cchHHHhhhcCCCCCEEEec--ccc
Confidence 6665555 689998766 99999999999 999999999986432 11101112111246777655 887
Q ss_pred CCC-cCeeEEEEeC
Q 018437 280 LVY-AGVGWVVWRT 292 (356)
Q Consensus 280 ~~P-~g~g~l~~~~ 292 (356)
+++ .++|+++.++
T Consensus 277 ~~G~~~iG~~~~~~ 290 (429)
T 1s0a_A 277 TGGTMTLSATLTTR 290 (429)
T ss_dssp GTSSSCCEEEEECH
T ss_pred cCCCccceEEEeCH
Confidence 777 7899998764
No 199
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.65 E-value=7.9e-15 Score=139.97 Aligned_cols=194 Identities=15% Similarity=0.003 Sum_probs=132.8
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.+......+..+ ......++++++++++|.+ .+++|+||++|+..++.+++..+..
T Consensus 53 ~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~l~~~la~~~~~~-------~v~~~~gg~ea~~~al~~~~~~~~~---- 119 (395)
T 3nx3_A 53 NHAKFNAKIKAQVDKLLHTSNLY--YNENIAAAAKNLAKASALE-------RVFFTNSGTESIEGAMKTARKYAFN---- 119 (395)
T ss_dssp SCHHHHHHHHHHHTTCSCCCTTS--BCHHHHHHHHHHHHHHTCS-------EEEEESSHHHHHHHHHHHHHHHHHH----
T ss_pred CCHHHHHHHHHHHHhcccccccc--CCHHHHHHHHHHHHhcCCC-------eEEEeCCHHHHHHHHHHHHHHHhhc----
Confidence 35788898888876533322222 2345667888899998843 3899999999999999988765321
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHhh-------------CCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCc
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARYF-------------EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~~-------------G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (356)
.| ..+++|++..++|+.+...+..+ +.++..+|.+ |+++|++++++++++|++..++++
T Consensus 120 ~g--~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~~l~~~l~~~~~~v~~~~~~~~ 191 (395)
T 3nx3_A 120 KG--VKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYN------DISSVEKLVNEKTCAIILESVQGE 191 (395)
T ss_dssp TT--CTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTT------CHHHHHTTCCTTEEEEEEESEECT
T ss_pred cC--CCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCC------CHHHHHHhccCCeEEEEEeCccCC
Confidence 11 12467888777765433222222 2234444322 799999999988899999999999
Q ss_pred ccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEE
Q 018437 215 TGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (356)
Q Consensus 215 tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~ 290 (356)
+|.+.+ +++|.++|++| |+++|+|++|.++.. .......+......|.++++ |.++++.++|+++.
T Consensus 192 ~G~~~~~~~~l~~l~~l~~~~------~~~li~Dev~~~~g~--~g~~~~~~~~~~~~d~~t~s--K~~~~G~~~G~~~~ 261 (395)
T 3nx3_A 192 GGINPANKDFYKALRKLCDEK------DILLIADEIQCGMGR--SGKFFAYEHAQILPDIMTSA--KALGCGLSVGAFVI 261 (395)
T ss_dssp TSCEECCHHHHHHHHHHHHHH------TCEEEEECTTTTTTT--TSSSSGGGGGTCCCSEEEEC--GGGTTTSCCEEEEE
T ss_pred CCcccCCHHHHHHHHHHHHHc------CCEEEEEecccCCCc--CCcchhHHhcCCCCCEEEec--ccccCCCceEEEEE
Confidence 999877 99999999999 999999999986432 11101111111245777655 87767788999987
Q ss_pred eC
Q 018437 291 RT 292 (356)
Q Consensus 291 ~~ 292 (356)
++
T Consensus 262 ~~ 263 (395)
T 3nx3_A 262 NQ 263 (395)
T ss_dssp CH
T ss_pred ch
Confidence 64
No 200
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.64 E-value=1.1e-14 Score=140.32 Aligned_cols=195 Identities=11% Similarity=-0.087 Sum_probs=129.2
Q ss_pred hHHHHHHHHHHhcccCC-CcccCcchHHHHHHHHHHHHHHhCCC-CCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 69 EPECDKLVMASINKNYV-DMDEYPVTTELQNRCVNMIAHLFNTP-VADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~-~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+|.+.+++.+.+..... ....++ .....++++.+++++|.+ + ..+++|+||++|+..++.+++..
T Consensus 61 ~p~v~~a~~~~~~~~~~~~~~~~~--~~~~~~l~~~la~~~~~~~~-----~~v~~~~gg~ea~~~ai~~~~~~------ 127 (419)
T 2eo5_A 61 HPEVIKIGIEQMQKLAHAAANDFY--NIPQLELAKKLVTYSPGNFQ-----KKVFFSNSGTEAIEASIKVVKNT------ 127 (419)
T ss_dssp CHHHHHHHHHHHTTSCCCSCSCSC--CHHHHHHHHHHHHHSSCSSC-----EEEEEESSHHHHHHHHHHHHHTT------
T ss_pred CHHHHHHHHHHHhhCccccccccC--CHHHHHHHHHHHHhCCCCcC-----CEEEEeCchHHHHHHHHHHHHHh------
Confidence 57899999888764321 111122 234456778899999986 3 24899999999999999887531
Q ss_pred hcCCCCCCCeEEecCCCcc-hHHHHHHhh-------------CCeeEEEEecCCccc----------------cCHHHHH
Q 018437 147 EQGKPYDKPNIVTGANVQV-CWEKFARYF-------------EVELKEVKLEEGYYV----------------MNPVKAV 196 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~h~-s~~~~~~~~-------------G~~v~~v~~~~~~~~----------------~d~~~L~ 196 (356)
.+++|++++++++ .+..++... +.+++.+|.+.+ ++ +|+++|+
T Consensus 128 ------~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~g~~~~~~~~~~~~~~~~~l~ 200 (419)
T 2eo5_A 128 ------GRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNP-YRNPWHINGYENPSELVNRVIEFIE 200 (419)
T ss_dssp ------SCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCS-SSCTTCCCTTTCHHHHHHHHHHHHH
T ss_pred ------hCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCcc-ccccccccccccchhhHHHHHHHHH
Confidence 1467888877654 333333221 135778887542 33 4789999
Q ss_pred -HHHhh-----CceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCC
Q 018437 197 -ELVDE-----NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLP 266 (356)
Q Consensus 197 -~~i~~-----~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 266 (356)
+++++ ++++|+++..++++|.+.+ +++|.++|++| ++++|+|++|.++.. .......+....
T Consensus 201 ~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~------~~~li~DE~~~~~g~--~g~~~~~~~~~~ 272 (419)
T 2eo5_A 201 DYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKY------GILLVDDEVQMGLGR--TGKLFAIENFNT 272 (419)
T ss_dssp HTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHH------TCEEEEECTTTTTTT--TSSSSGGGGGTC
T ss_pred HHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCcc--CcchhhHHhcCC
Confidence 99873 4556655544567898666 99999999999 999999999986532 111011121112
Q ss_pred CceEEEEcCCcCCCCC-cCeeEEEEeCC
Q 018437 267 LVKSINVSGHKYGLVY-AGVGWVVWRTK 293 (356)
Q Consensus 267 ~~Ds~~~~~hK~l~~P-~g~g~l~~~~~ 293 (356)
..|.+++ .|.++++ .++|+++.+++
T Consensus 273 ~~d~~t~--sK~~~~G~~riG~~~~~~~ 298 (419)
T 2eo5_A 273 VPDVITL--AKALGGGIMPIGATIFRKD 298 (419)
T ss_dssp CCSEEEE--CGGGGTTTSCCEEEEEEGG
T ss_pred CCCEEEe--cccccCCccceEEEEEchH
Confidence 4576654 4877666 88999998753
No 201
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.64 E-value=9.9e-15 Score=140.86 Aligned_cols=195 Identities=13% Similarity=-0.085 Sum_probs=131.5
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.+.........+ ......++++++++++|.+ .+++|+||++|+..++.+++..+..
T Consensus 74 ~~p~v~~ai~~~~~~~~~~~~~~--~~~~~~~l~~~la~~~g~~-------~v~~~~ggteA~~~al~~~~~~~~~---- 140 (420)
T 2pb2_A 74 CHPALVEALKSQGETLWHTSNVF--TNEPALRLGRKLIDATFAE-------RVLFMNSGTEANETAFKLARHYACV---- 140 (420)
T ss_dssp TCHHHHHHHHHHHTTCCCCCTTS--CCHHHHHHHHHHHHHSSCS-------EEEEESSHHHHHHHHHHHHHHHHHH----
T ss_pred CCHHHHHHHHHHHHhcccccCcc--CCHHHHHHHHHHHhhCCCC-------eEEEeCCHHHHHHHHHHHHHHHhhh----
Confidence 35788898888776432211111 2345667888899998854 3899999999999999988764321
Q ss_pred cCCCCCCCeEEecCCCcc-hHHHHHHhhCCe------------eEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCc
Q 018437 148 QGKPYDKPNIVTGANVQV-CWEKFARYFEVE------------LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~-s~~~~~~~~G~~------------v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (356)
.|.+ ++++||+++++|+ ....++...|.+ +..+|. .|+++|++++++++++|+++.++++
T Consensus 141 ~~~~-g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~------~d~~~le~~i~~~~~~vi~~p~~~~ 213 (420)
T 2pb2_A 141 RHSP-FKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF------NDLHAVKAVMDDHTCAVVVEPIQGE 213 (420)
T ss_dssp HTCT-TCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT------TCHHHHHHHCCTTEEEEEECSEETT
T ss_pred ccCC-CCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC------CCHHHHHHHhccCceEEEEeCCcCC
Confidence 1111 1347887776654 444455555543 344442 2899999999988999998888887
Q ss_pred ccc----cCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEE
Q 018437 215 TGE----FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (356)
Q Consensus 215 tG~----~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~ 290 (356)
+|. .+++++|.++|+++ |+++|+|++|.++.. .......+..-...|.++ .+|+++++.++|+++.
T Consensus 214 gG~~~~~~~~l~~l~~l~~~~------gi~lI~Dev~~g~~~--~g~~~~~~~~~~~~diit--~sK~l~~G~~iG~~~~ 283 (420)
T 2pb2_A 214 GGVQAATPEFLKGLRDLCDEH------QALLVFDEVQCGMGR--TGDLFAYMHYGVTPDILT--SAKALGGGFPVSAMLT 283 (420)
T ss_dssp TTSEECCHHHHHHHHHHHHHT------TCEEEEECTTTTTTT--TSSSSHHHHHTCCCSEEE--ECGGGGTTSCCEEEEE
T ss_pred CCeecCCHHHHHHHHHHHHHc------CCEEEEEcCCcCccc--CCcHHHHHhcCCCCCeEE--ecccccCCCceEEEEE
Confidence 776 36899999999999 999999999976422 111011111112467775 4699887777999998
Q ss_pred eC
Q 018437 291 RT 292 (356)
Q Consensus 291 ~~ 292 (356)
++
T Consensus 284 ~~ 285 (420)
T 2pb2_A 284 TQ 285 (420)
T ss_dssp CH
T ss_pred hH
Confidence 65
No 202
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.63 E-value=1.8e-14 Score=139.19 Aligned_cols=203 Identities=10% Similarity=-0.049 Sum_probs=126.7
Q ss_pred hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhc
Q 018437 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (356)
+|.+.+++.+.+... .++...........++++++++.++.+. ..+++|+||++|+..++.+++..+.. .
T Consensus 47 ~p~v~~a~~~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~~~~~-----~~v~~~~gg~ea~~~al~~~~~~~~~----~ 116 (430)
T 3i4j_A 47 RAEVGERMAAQAARL-PFVHGSQFSSDVLEEYAGRLARFVGLPT-----FRFWAVSGGSEATESAVKLARQYHVE----R 116 (430)
T ss_dssp CHHHHHHHHHHHHHC-CCCCTTTCEEHHHHHHHHHHHHHTTCTT-----CEEEEESSHHHHHHHHHHHHHHHHHH----T
T ss_pred CHHHHHHHHHHHHhc-ccccccccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCcHHHHHHHHHHHHHHHHHh----c
Confidence 578888887776542 2222222334566678888999998765 24899999999999999998765432 1
Q ss_pred CCCCCCCeEEecCCCcchHHHHHHhhCC---------------eeEEEEecCC--ccccCHHHHHHHHh----hCceEEE
Q 018437 149 GKPYDKPNIVTGANVQVCWEKFARYFEV---------------ELKEVKLEEG--YYVMNPVKAVELVD----ENTICVA 207 (356)
Q Consensus 149 g~~~~~~~vi~s~~~h~s~~~~~~~~G~---------------~v~~v~~~~~--~~~~d~~~L~~~i~----~~~~~v~ 207 (356)
|. ..+++|++.+++|+.+...+..++. ++..+|.+.. .+..|+++|+++++ +++++|+
T Consensus 117 g~-~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi 195 (430)
T 3i4j_A 117 GE-PGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFM 195 (430)
T ss_dssp TC-TTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEE
T ss_pred CC-CCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEE
Confidence 21 1246888888887765544433332 4445554321 13457789999997 4456666
Q ss_pred EecCCC-cccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccccc-CCCceEEEEcCCcCCCC
Q 018437 208 AILGST-LTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLV 281 (356)
Q Consensus 208 ~~~~~~-~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~Ds~~~~~hK~l~~ 281 (356)
++..++ ++|.+.+ +++|.++|++| |+++|+|++|.++... ......+.. ....|.++++ |.+.+
T Consensus 196 ~~p~~~~~~G~~~~~~~~l~~l~~l~~~~------~~~li~DEv~~~~~~~--g~~~~~~~~~~~~~di~t~s--K~l~~ 265 (430)
T 3i4j_A 196 AEPVVGASDAALAPAPGYYERVRDICDEA------GIIFIADEVMSGMGRC--GSPLALSRWSGVTPDIAVLG--KGLAA 265 (430)
T ss_dssp ECSSCCGGGTTCCCCTTHHHHHHHHHHHH------TCEEEEECTTTTTTTT--SSSSGGGGTTTCCCSEEEEC--GGGTT
T ss_pred EcCcccCcCCcccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCcc--cchhhhhhhcCCCCcEEEEc--ccccC
Confidence 666666 8888766 99999999999 9999999999875321 110011111 1135666654 98766
Q ss_pred C-cCeeEEEEeC
Q 018437 282 Y-AGVGWVVWRT 292 (356)
Q Consensus 282 P-~g~g~l~~~~ 292 (356)
. ..+|+++.++
T Consensus 266 G~~r~G~~~~~~ 277 (430)
T 3i4j_A 266 GYAPLAGLLAAP 277 (430)
T ss_dssp TSSCCEEEEECH
T ss_pred CccccEEEEECH
Confidence 5 6688888743
No 203
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.63 E-value=3.3e-15 Score=149.06 Aligned_cols=215 Identities=12% Similarity=0.029 Sum_probs=143.5
Q ss_pred ccccccCCCChHHHHHHHHHHhcccCCCcccCcchHHHHHHHH-HHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHH
Q 018437 59 NLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCV-NMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF 137 (356)
Q Consensus 59 ~l~~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~-~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~ 137 (356)
+|+.+.+..+++.+.+++.+.+.. ..|....+...+.+++. .++.+.++..........+++|+|+++++.+++.++
T Consensus 108 ~l~~g~~~~~~~~~~~al~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~l 185 (546)
T 2zy4_A 108 SYVRDQLGLDPAAFLHEMVDGILG--CNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESL 185 (546)
T ss_dssp HHHHHTSCCCHHHHHHHHHHHHHT--CSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHHH
T ss_pred ecccCCCCCCChHHHHHHHHhhhc--CCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHHHHHHh
Confidence 344445555556666666555532 23333334555665544 455555543110000134899999999999988874
Q ss_pred HHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhh--CCeeEEEEecCC-ccccCHHHHHHHHhhCceEEEEecCCCc
Q 018437 138 KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYF--EVELKEVKLEEG-YYVMNPVKAVELVDENTICVAAILGSTL 214 (356)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~--G~~v~~v~~~~~-~~~~d~~~L~~~i~~~~~~v~~~~~~~~ 214 (356)
..+. .-..+++|+++.|+|+.+...+... |++++.+|++++ ++.+|+++|++++++++++|++++|+||
T Consensus 186 ~~~~--------l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~p~NP 257 (546)
T 2zy4_A 186 KLNG--------LLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNP 257 (546)
T ss_dssp HHTT--------SSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTTEEEEEEESSCSS
T ss_pred hhhh--------cCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCCCCeEEEEECCCCC
Confidence 2110 0012578999999999999887654 577888888653 3789999999988888999999999999
Q ss_pred ccccCC---HHHHHHHH--HHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCC-CCcCeeEE
Q 018437 215 TGEFED---VKLLHDLL--TKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWV 288 (356)
Q Consensus 215 tG~~~~---i~~I~~i~--~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~-~P~g~g~l 288 (356)
||.+.+ +++|.++| +++ ++++++|++|+.+... ....... ....+.+..|++|+++ ....+|++
T Consensus 258 tG~~~~~~~l~~l~~~a~~~~~------~~~ii~De~y~~~~~~---~~s~~~~-~~~~~i~~~S~SK~~g~~GlRiG~~ 327 (546)
T 2zy4_A 258 PSVKMDQRSLERVRNIVAEHRP------DLMILTDDVYGTFADD---FQSLFAI-CPENTLLVYSFSKYFGATGWRLGVV 327 (546)
T ss_dssp SCBCCCHHHHHHHHHHHHHTCT------TCEEEEECTTGGGSTT---CCCHHHH-CGGGEEEEEESTTTTTCGGGCEEEE
T ss_pred CCccCCHHHHHHHHHHHHhccC------CcEEEEeCcchhhccc---CcCHHHh-CCCCEEEEEeCccccCCCCcceEEE
Confidence 999966 56678888 677 9999999999976431 1001111 2245677888999874 34568999
Q ss_pred EEeCC
Q 018437 289 VWRTK 293 (356)
Q Consensus 289 ~~~~~ 293 (356)
+..++
T Consensus 328 ~~~~~ 332 (546)
T 2zy4_A 328 AAHQQ 332 (546)
T ss_dssp EEESS
T ss_pred EECCH
Confidence 88764
No 204
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.61 E-value=3.4e-14 Score=136.69 Aligned_cols=198 Identities=9% Similarity=-0.100 Sum_probs=126.3
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
+++.+.+++.+.+......... ........++++.++++++.+. ...+++|+||++|+..++..++...
T Consensus 58 ~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~l~~~la~~~~~~~----~~~v~~~~g~~~a~~~~~~~a~~~~------ 126 (426)
T 1sff_A 58 LHPKVVAAVEAQLKKLSHTCFQ-VLAYEPYLELCEIMNQKVPGDF----AKKTLLVTTGSEAVENAVKIARAAT------ 126 (426)
T ss_dssp TCHHHHHHHHHHTTTCSCCCTT-TEECHHHHHHHHHHHHHSSCSS----CEEEEEESSHHHHHHHHHHHHHHHH------
T ss_pred CCHHHHHHHHHHHHhCCCcccc-ccCCHHHHHHHHHHHHhCCccc----ccEEEEeCchHHHHHHHHHHHHHhh------
Confidence 4578889888887643211101 1112334466677888883221 0248999999999999988543211
Q ss_pred cCCCCCCCeEEecCCCcc-hHHHHHHhhCCe-------------eEEEEecC----CccccCHHHHHHHHh-----hCce
Q 018437 148 QGKPYDKPNIVTGANVQV-CWEKFARYFEVE-------------LKEVKLEE----GYYVMNPVKAVELVD-----ENTI 204 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~-s~~~~~~~~G~~-------------v~~v~~~~----~~~~~d~~~L~~~i~-----~~~~ 204 (356)
.+++|++.+++|+ .+..++...|.+ ++.+|++. ..+.+|+++|+++++ ++++
T Consensus 127 -----~~~~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 201 (426)
T 1sff_A 127 -----KRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIA 201 (426)
T ss_dssp -----TCCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEE
T ss_pred -----CCCeEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceE
Confidence 0237777777664 444566665543 77788753 125689999999997 4566
Q ss_pred EEEEec-CCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCC
Q 018437 205 CVAAIL-GSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG 279 (356)
Q Consensus 205 ~v~~~~-~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l 279 (356)
+|+++. ++| ||.+.+ +++|.++|+++ ++++|+|++|+++.. .......+.....+|.+ +++|++
T Consensus 202 ~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~------~~~li~De~~~~~~~--~g~~~~~~~~~~~~di~--s~sK~~ 270 (426)
T 1sff_A 202 AIVIEPVQGE-GGFYASSPAFMQRLRALCDEH------GIMLIADEVQSGAGR--TGTLFAMEQMGVAPDLT--TFAKSI 270 (426)
T ss_dssp EEEECSBCTT-TTSCBCCHHHHHHHHHHHHHH------TCEEEEECTTTTTTT--TSSSSGGGGTTSCCSEE--EECGGG
T ss_pred EEEEecccCC-CCcccCCHHHHHHHHHHHHHc------CCEEEEechhhccCc--ccchhhhhhcCCCCCEE--EEcccc
Confidence 776644 345 997777 99999999999 999999999996432 11101112111236766 456988
Q ss_pred CCCcCeeEEEEeC
Q 018437 280 LVYAGVGWVVWRT 292 (356)
Q Consensus 280 ~~P~g~g~l~~~~ 292 (356)
+....+|+++.++
T Consensus 271 ~~GlriG~~~~~~ 283 (426)
T 1sff_A 271 AGGFPLAGVTGRA 283 (426)
T ss_dssp GTSSCCEEEEEEH
T ss_pred cCCCceEEEEEcH
Confidence 6544579999875
No 205
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.60 E-value=1.1e-13 Score=134.77 Aligned_cols=199 Identities=11% Similarity=-0.028 Sum_probs=130.0
Q ss_pred hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhc
Q 018437 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (356)
+|.+.+++.+.+..... ...........+++++++++++.+. . +++|+||++|+..++.+++..+.. .
T Consensus 67 ~p~v~~A~~~~~~~~~~--~~~~~~~~~~~~la~~l~~~~~~~~-----~-v~~~~ggseA~~~al~~~~~~~~~----~ 134 (452)
T 3n5m_A 67 RKELAEAAYKQLQTLSY--FPMSQSHEPAIKLAEKLNEWLGGEY-----V-IFFSNSGSEANETAFKIARQYYAQ----K 134 (452)
T ss_dssp CHHHHHHHHHHHTTCCC--CCTTSEEHHHHHHHHHHHHHHTSCE-----E-EEEESSHHHHHHHHHHHHHHHHHT----T
T ss_pred CHHHHHHHHHHHHhcCC--cccccCCHHHHHHHHHHHHhCCCCc-----e-EEEeCchHHHHHHHHHHHHHHHHh----c
Confidence 57889998888764322 1122334566788889999998764 2 899999999999999998754311 1
Q ss_pred CCCCCCCeEEecCCCcchHHHHHHhhCC-------------eeEEEEecCCcccc------------CHHHHHHHHh---
Q 018437 149 GKPYDKPNIVTGANVQVCWEKFARYFEV-------------ELKEVKLEEGYYVM------------NPVKAVELVD--- 200 (356)
Q Consensus 149 g~~~~~~~vi~s~~~h~s~~~~~~~~G~-------------~v~~v~~~~~~~~~------------d~~~L~~~i~--- 200 (356)
|.+ .+++|++.+++|+.+...+..++. ++..++.... ++. ++++|+++++
T Consensus 135 g~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~le~~l~~~~ 212 (452)
T 3n5m_A 135 GEP-HRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDC-YRMPGIERENIYDVECVKEVDRVMTWEL 212 (452)
T ss_dssp TCT-TCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCT-TTSTTTTTSCGGGCHHHHHHHHHHHHHC
T ss_pred CCC-CCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCcc-ccCccCCchhhHHHHHHHHHHHHHHhcC
Confidence 110 246788877776554333332221 2445554211 111 1899999997
Q ss_pred -hCceEEEEecC-CCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEc
Q 018437 201 -ENTICVAAILG-STLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVS 274 (356)
Q Consensus 201 -~~~~~v~~~~~-~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~ 274 (356)
+++++|+++.+ +| +|.+.+ +++|.++|++| |+++|+|++|.++... ......+......|.++++
T Consensus 213 ~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~------~~llI~DEv~~g~g~~--g~~~~~~~~~~~~di~t~s 283 (452)
T 3n5m_A 213 SETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKH------GALLISDEVICGFGRT--GKAFGFMNYDVKPDIITMA 283 (452)
T ss_dssp GGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHH------TCEEEEECTTTTTTTT--SSSSGGGGTTCCCSEEEEC
T ss_pred CCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHc------CCEEEEecchhCCCcc--cccchhhhcCCCCCEEeec
Confidence 45677777777 78 998876 99999999999 9999999999875321 1100111111235777654
Q ss_pred CCcCCCCC-cCeeEEEEeC
Q 018437 275 GHKYGLVY-AGVGWVVWRT 292 (356)
Q Consensus 275 ~hK~l~~P-~g~g~l~~~~ 292 (356)
|.++++ .++|+++.++
T Consensus 284 --K~l~~G~~~ig~~~~~~ 300 (452)
T 3n5m_A 284 --KGITSAYLPLSATAVKR 300 (452)
T ss_dssp --GGGGTTSSCCEEEEEEH
T ss_pred --ccccCCCcceEEEEECH
Confidence 876666 7889998764
No 206
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.60 E-value=6.7e-14 Score=135.65 Aligned_cols=197 Identities=12% Similarity=-0.075 Sum_probs=121.6
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.+.........+ ......++.+.+++++|.+ .+++|+||++|+..++.+++..... .
T Consensus 82 ~~p~v~~ai~~~~~~~~~~~~~~--~~~~~~~l~~~la~~~g~~-------~v~~~~sGseA~~~al~~a~~~~~~---~ 149 (433)
T 1z7d_A 82 CHPNILNAMINQAKNLTICSRAF--FSVPLGICERYLTNLLGYD-------KVLMMNTGAEANETAYKLCRKWGYE---V 149 (433)
T ss_dssp TCHHHHHHHHHHHTTCSCCCTTS--EEHHHHHHHHHHHHHHTCS-------EEEEESSHHHHHHHHHHHHHHHHHH---T
T ss_pred CCHHHHHHHHHHHHhCCCccCCc--CCHHHHHHHHHHHhhcCCC-------eEEEeCCHHHHHHHHHHHHHHHhhh---c
Confidence 56889999888876432211112 2334556777888888854 3899999999999999987642110 0
Q ss_pred cCCCCCCCeEEecCCCcch-HHHHHHhhC------------CeeEEEEecCCccccCHHHHHHHH-hhCceEEEEecCCC
Q 018437 148 QGKPYDKPNIVTGANVQVC-WEKFARYFE------------VELKEVKLEEGYYVMNPVKAVELV-DENTICVAAILGST 213 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s-~~~~~~~~G------------~~v~~v~~~~~~~~~d~~~L~~~i-~~~~~~v~~~~~~~ 213 (356)
.|...++++|++++++|.. ...++...| .+++.+|. .|+++|++++ ++++++|+++..++
T Consensus 150 ~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~------~d~~~le~~l~~~~~~~vi~ep~~~ 223 (433)
T 1z7d_A 150 KKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY------DDLEALEEELKDPNVCAFIVEPIQG 223 (433)
T ss_dssp SCCCTTCCEEEEETTC--------------------------CEEEECT------TCHHHHHHHHTSTTEEEEEECSSBS
T ss_pred cCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC------CCHHHHHHHhCCCCEEEEEEECCCC
Confidence 1111113678888776544 343444434 23334432 2899999999 56777777776667
Q ss_pred cccccC----CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCC-cCeeEE
Q 018437 214 LTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVGWV 288 (356)
Q Consensus 214 ~tG~~~----~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~g~g~l 288 (356)
++|.+. ++++|.++|+++ |+++|+|++|.++.. .......+..-...|.++ ..|++++. ...|++
T Consensus 224 ~~G~~~~~~~~l~~l~~l~~~~------g~llI~DEv~~g~g~--~g~~~~~~~~~~~~di~t--~sK~l~~G~~~~G~v 293 (433)
T 1z7d_A 224 EAGVIVPSDNYLQGVYDICKKY------NVLFVADEVQTGLGR--TGKLLCVHHYNVKPDVIL--LGKALSGGHYPISAV 293 (433)
T ss_dssp TTTSBCCCTTHHHHHHHHHHHT------TCEEEEECTTTTTTT--TSSSSGGGGGTCCCSEEE--ECGGGGTTSSCCEEE
T ss_pred CCCccCCCHHHHHHHHHHHHHc------CCEEEEecCccCCCc--CCcchhhHhcCCCCCEEE--ECccccCCCCCeEEE
Confidence 789764 799999999999 999999999976422 111011111112467765 46988765 468999
Q ss_pred EEeC
Q 018437 289 VWRT 292 (356)
Q Consensus 289 ~~~~ 292 (356)
+.++
T Consensus 294 ~~~~ 297 (433)
T 1z7d_A 294 LAND 297 (433)
T ss_dssp EECH
T ss_pred EECH
Confidence 8864
No 207
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.59 E-value=7.3e-14 Score=135.74 Aligned_cols=201 Identities=13% Similarity=-0.003 Sum_probs=129.0
Q ss_pred hHHHHHHHHHHhcccCCCcccC-cchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 69 EPECDKLVMASINKNYVDMDEY-PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~~-~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
+|.+.+++.+.+.... +... ........++++.++++++.+. ..+++|+||++|+..++.+++.....
T Consensus 68 ~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~~~~-----~~v~~~~ggsea~~~al~~~~~~~~~---- 136 (449)
T 3a8u_X 68 RKEIQEAVAKQLSTLD--YSPGFQYGHPLSFQLAEKITDLTPGNL-----NHVFFTDSGSECALTAVKMVRAYWRL---- 136 (449)
T ss_dssp CHHHHHHHHHHTTTCS--CCCSSSCCCHHHHHHHHHHHTTSSTTE-----EEEEEESSHHHHHHHHHHHHHHHHHH----
T ss_pred CHHHHHHHHHHHHhCC--CccccccCCHHHHHHHHHHHHhCCCCC-----CEEEEcCcHHHHHHHHHHHHHHHHHh----
Confidence 5789999988876432 1111 2233455677888999887654 34899999999999999988753211
Q ss_pred cCCCCCCCeEEecCCCcc-hHHHHHHhhC------------CeeEEEEecCCccc-----cC--------HHHHHHHHh-
Q 018437 148 QGKPYDKPNIVTGANVQV-CWEKFARYFE------------VELKEVKLEEGYYV-----MN--------PVKAVELVD- 200 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~-s~~~~~~~~G------------~~v~~v~~~~~~~~-----~d--------~~~L~~~i~- 200 (356)
.|.+ .+++|++.+++|+ ....++...| .+++.++++.. +. +| +++|+++++
T Consensus 137 ~g~~-~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~d~~~~~~~~~~~le~~l~~ 214 (449)
T 3a8u_X 137 KGQA-TKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLL-ASNAYSRGMPKEGGIALADELLKLIEL 214 (449)
T ss_dssp TTCT-TCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCC-GGGTTCSSSCSSSHHHHHHHHHHHHHH
T ss_pred cCCC-CCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCcc-ccCccccCChHHHHHHHHHHHHHHHHh
Confidence 1111 1457887666654 3344454443 24566665431 22 46 999999997
Q ss_pred ---hCceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEE
Q 018437 201 ---ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINV 273 (356)
Q Consensus 201 ---~~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~ 273 (356)
+++++|+++..++++|.+.| +++|.++|++| ++++|+|++|.++.. .......+..-...|.+++
T Consensus 215 ~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~------~~~li~Dev~~~~g~--~g~~~~~~~~~~~~di~s~ 286 (449)
T 3a8u_X 215 HDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQH------NILLVFDEVITGFGR--TGSMFGADSFGVTPDLMCI 286 (449)
T ss_dssp HCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHH------TCEEEEECTTTTTTT--TSSSSHHHHHTCCCSEEEE
T ss_pred cCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHh------CCEEEEeccccCccc--cCcchhhhhcCCCCCEEEE
Confidence 45666666655577998888 99999999999 999999999965422 1110011111113576654
Q ss_pred cCCcCCCCC-cCeeEEEEeC
Q 018437 274 SGHKYGLVY-AGVGWVVWRT 292 (356)
Q Consensus 274 ~~hK~l~~P-~g~g~l~~~~ 292 (356)
.|++.+. ..+|++++++
T Consensus 287 --sK~l~~G~~~~G~~~~~~ 304 (449)
T 3a8u_X 287 --AKQVTNGAIPMGAVIAST 304 (449)
T ss_dssp --CGGGGTTSSCCEEEEEEH
T ss_pred --cccccCCCCceEEEEECH
Confidence 5987643 3488888864
No 208
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.59 E-value=2e-14 Score=139.16 Aligned_cols=198 Identities=9% Similarity=-0.134 Sum_probs=129.1
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.+... .++....+......+++++++++++...+ ..+++|+||++|+..++.+++...
T Consensus 60 ~~p~v~~a~~~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~~~~~~----~~v~~~~ggsea~~~al~~~~~~~------ 128 (439)
T 3dxv_A 60 GHPAIVAAVSAAAANP-AGATILSASNAPAVTLAERLLASFPGEGT----HKIWFGHSGSDANEAAYRAIVKAT------ 128 (439)
T ss_dssp SCHHHHHHHHHHHHSC-SCSCSSSSEEHHHHHHHHHHHHTTTCTTT----EEEEEESSHHHHHHHHHHHHHHHH------
T ss_pred CCHHHHHHHHHHHHhc-cCccccccCCHHHHHHHHHHHHhCCCCCC----CEEEEeCCHHHHHHHHHHHHHHHh------
Confidence 4578888888777643 23322334456677888999999865431 248999999999999999875431
Q ss_pred cCCCCCCCeEEecCCC-cchHHHHHHhhCCee--------------EEEEecCCcccc-----CHHHHHHHH----hhCc
Q 018437 148 QGKPYDKPNIVTGANV-QVCWEKFARYFEVEL--------------KEVKLEEGYYVM-----NPVKAVELV----DENT 203 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~-h~s~~~~~~~~G~~v--------------~~v~~~~~~~~~-----d~~~L~~~i----~~~~ 203 (356)
.+++|++.++. |..+..++...|... ..+|.+.. +.- |+++|++++ .+++
T Consensus 129 -----~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~le~~l~~~~~~~~ 202 (439)
T 3dxv_A 129 -----GRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPY-RNDPTGDAILTLLTEKLAAVPAGSI 202 (439)
T ss_dssp -----SCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSCB-TTBTTSHHHHHHHHHHHHTSCTTCE
T ss_pred -----CCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcc-cccccHHHHHHHHHHHHHhcCCCCE
Confidence 13456665555 445544444433322 23343321 122 799999999 4567
Q ss_pred eEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCC
Q 018437 204 ICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG 279 (356)
Q Consensus 204 ~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l 279 (356)
++|+++.+++++|.+.+ +++|.++|++| ++++|+|++|+++.. .......+......|.++ ..|.+
T Consensus 203 ~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~------~~~li~DE~~~g~g~--~g~~~~~~~~~~~~di~s--~sK~~ 272 (439)
T 3dxv_A 203 GAAFIEPIQSDGGLIVPPDGFLRKFADICRAH------GILVVCDEVKVGLAR--SGRLHCFEHEGFVPDILV--LGKGL 272 (439)
T ss_dssp EEEEECSSBSTTTSBCCCTTHHHHHHHHHHHT------TCEEEEECTTTCTTT--TSSSSGGGGTTCCCSEEE--ECGGG
T ss_pred EEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CchhhHHHhcCCCCCEEE--Ecchh
Confidence 88888888889999888 99999999999 999999999986422 111011111112356664 45987
Q ss_pred CCCcCeeEEEEeC
Q 018437 280 LVYAGVGWVVWRT 292 (356)
Q Consensus 280 ~~P~g~g~l~~~~ 292 (356)
++...+|+++.++
T Consensus 273 ~~G~riG~~~~~~ 285 (439)
T 3dxv_A 273 GGGLPLSAVIAPA 285 (439)
T ss_dssp GTTSCCEEEEEEH
T ss_pred cCCcceEEEEECH
Confidence 7666789988764
No 209
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.58 E-value=5.7e-14 Score=133.73 Aligned_cols=197 Identities=12% Similarity=0.037 Sum_probs=129.7
Q ss_pred CChHHHHHHHHHHhcccC--CCc-----ccCcchHHHHHHHHHHHHHHhCCCCCCCCCCC--eEEeCChhHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNY--VDM-----DEYPVTTELQNRCVNMIAHLFNTPVADDKTAV--GVGTVGSSEAIMLAGLAF 137 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~--~~~-----~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~--~~~t~Ggt~a~~~al~~~ 137 (356)
..++.|.+++.+.+.+.. ++| ..-....++|.-+++...++||++.. .| .+-..+|+.||+.++.++
T Consensus 65 ~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A----~w~VNVQP~SGs~AN~avy~Al 140 (490)
T 3ou5_A 65 FCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPA----QWGVNVQPYSGSPANLAVYTAL 140 (490)
T ss_dssp CCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTT----TEEEECCCSSHHHHHHHHHHHH
T ss_pred cCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCcc----ccCCCCCcCCHHHHHHHHHHHH
Confidence 456888888877665321 111 11224678999999999999999862 22 355668999999999998
Q ss_pred HHHHHHHHHhcCCCCCCCeEEecCCC---cchHH-----HHHHhhCC--eeEEEEecCCccccCHHHHHHHHhh-CceEE
Q 018437 138 KRKWQQKRKEQGKPYDKPNIVTGANV---QVCWE-----KFARYFEV--ELKEVKLEEGYYVMNPVKAVELVDE-NTICV 206 (356)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~vi~s~~~---h~s~~-----~~~~~~G~--~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v 206 (356)
.++ +++|+..+.. |.+.- ......|. ++...++|++++.+|.+++++...+ +|++|
T Consensus 141 l~P-------------GD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~kPklI 207 (490)
T 3ou5_A 141 LQP-------------HDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLI 207 (490)
T ss_dssp CC--------------CCCEECBC----------------------------CBCEETTTTEECHHHHHHHHHHHCCSEE
T ss_pred cCC-------------CCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCCcccHHHHHHHHhhcCCCeE
Confidence 765 5777765543 43322 11222233 3455566776799999999998865 78887
Q ss_pred EEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCee
Q 018437 207 AAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVG 286 (356)
Q Consensus 207 ~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g 286 (356)
++-...+ -...|++++.+||++. |.+|++|.|+-.+++. ....+-- ++.+|.++.+.||.|.+|.| |
T Consensus 208 i~G~SaY--~r~id~~~~reIAd~v------GA~Lm~DmAHiaGLVA--~g~~psP--~~~ADvVTtTTHKTLrGPrG-G 274 (490)
T 3ou5_A 208 IAGTSAY--ARLIDYARMREVCDEV------KAHLLADMAHISGLVA--AKVIPSP--FKHADIVTTTTHKTLRGARS-G 274 (490)
T ss_dssp EECCSSC--CSCCCHHHHHHHHHHH------TCEEEEECGGGHHHHH--TTSSCCG--GGTCSEEEEESSSTTCSCSC-E
T ss_pred EECCccC--ccccCHHHHHHHHhhc------ccEEEechhhhhhhhc--ccccCCc--cccceEEeccccccccCCCc-e
Confidence 7433333 3556899999999999 9999999998554441 2211111 34699999999999999987 8
Q ss_pred EEEEeCC
Q 018437 287 WVVWRTK 293 (356)
Q Consensus 287 ~l~~~~~ 293 (356)
++++++.
T Consensus 275 ~Il~~~~ 281 (490)
T 3ou5_A 275 LIFYRKG 281 (490)
T ss_dssp EEEEECS
T ss_pred EEEeccc
Confidence 8888763
No 210
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.57 E-value=5.9e-14 Score=135.72 Aligned_cols=193 Identities=12% Similarity=-0.001 Sum_probs=120.2
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.+....... ++ .....++++++++.++ +. ..+++|+|||+|+..++.+++...
T Consensus 72 ~~p~v~~a~~~~~~~~~~~~--~~--~~~~~~l~~~la~~~~-~~-----~~v~~~~sGsea~~~ai~~a~~~~------ 135 (434)
T 3l44_A 72 AHPHITKAITTAAENGVLYG--TP--TALEVKFAKMLKEAMP-AL-----DKVRFVNSGTEAVMTTIRVARAYT------ 135 (434)
T ss_dssp TCHHHHHHHHHHHHHCSCCS--SC--CHHHHHHHHHHHHHCT-TC-----SEEEEESSHHHHHHHHHHHHHHHH------
T ss_pred CCHHHHHHHHHHHHhCcCCC--CC--CHHHHHHHHHHHHhCC-CC-----CEEEEeCchHHHHHHHHHHHHHhh------
Confidence 35788888887776432211 12 2234456677888876 33 248999999999999999886531
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHH-hhCCeeEEEEecCCccc-------------cCHHHHHHHHh---hCceEEEEec
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFAR-YFEVELKEVKLEEGYYV-------------MNPVKAVELVD---ENTICVAAIL 210 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~-~~G~~v~~v~~~~~~~~-------------~d~~~L~~~i~---~~~~~v~~~~ 210 (356)
.+++|++..++|+.+...+. ..|..+..+......+. -|+++|+++++ +++++|+++.
T Consensus 136 -----~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep 210 (434)
T 3l44_A 136 -----GRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAILVEP 210 (434)
T ss_dssp -----CCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECS
T ss_pred -----CCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEEEEEcC
Confidence 14678887777654333222 22222111111100011 18999999997 3566777777
Q ss_pred CCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCee
Q 018437 211 GSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVG 286 (356)
Q Consensus 211 ~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g 286 (356)
.++++|.+.+ +++|.++|++| |+++|+|++|.++ . .......+..-...|.++++ |.++++.++|
T Consensus 211 ~~~~~G~~~~~~~~l~~l~~l~~~~------~illI~DEv~~g~-~--~g~~~~~~~~~~~~di~t~s--K~~~~G~~iG 279 (434)
T 3l44_A 211 IVGNFGIVEPKPGFLEKVNELVHEA------GALVIYDEVITAF-R--FMYGGAQDLLGVTPDLTALG--KVIGGGLPIG 279 (434)
T ss_dssp SBCTTSCBCCCTTHHHHHHHHHHTT------TCEEEEECTTTTT-T--SSSSCHHHHHTCCCSEEEEE--GGGGTTSSCE
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccce-e--ccccHHHHHcCCCCCeeehh--hhhcCCcCee
Confidence 7777777777 99999999999 9999999999875 2 11111111111235666654 8877888899
Q ss_pred EEEEeC
Q 018437 287 WVVWRT 292 (356)
Q Consensus 287 ~l~~~~ 292 (356)
+++.++
T Consensus 280 ~~~~~~ 285 (434)
T 3l44_A 280 AYGGKK 285 (434)
T ss_dssp EEEECH
T ss_pred eEEEcH
Confidence 997653
No 211
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.57 E-value=1.3e-13 Score=133.95 Aligned_cols=197 Identities=13% Similarity=-0.043 Sum_probs=126.5
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.+.........++ .....++.+++++++|.+ .+++++||++|+..++.+++..... .
T Consensus 93 ~~p~v~~Ai~~~~~~~~~~~~~~~--~~~~~~l~~~la~~~g~~-------~v~~~~sGseA~~~al~~~~~~~~~---~ 160 (439)
T 2oat_A 93 CHPKIVNALKSQVDKLTLTSRAFY--NNVLGEYEEYITKLFNYH-------KVLPMNTGVEAGETACKLARKWGYT---V 160 (439)
T ss_dssp TCHHHHHHHHHHHTTCSCCCTTSE--ESSHHHHHHHHHHHHTCS-------EEEEESSHHHHHHHHHHHHHHHHHH---T
T ss_pred CCHHHHHHHHHHHHhcCcccCccC--CHHHHHHHHHHHHhcCCC-------EEEEeCCHHHHHHHHHHHHHHHhhh---c
Confidence 568899999888764321111111 123445666788888754 3899999999999999988643211 0
Q ss_pred cCCCCCCCeEEecCCCc-chHHHHHHhhC------------CeeEEEEecCCccccCHHHHHHHHh-hCceEEEEecCCC
Q 018437 148 QGKPYDKPNIVTGANVQ-VCWEKFARYFE------------VELKEVKLEEGYYVMNPVKAVELVD-ENTICVAAILGST 213 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h-~s~~~~~~~~G------------~~v~~v~~~~~~~~~d~~~L~~~i~-~~~~~v~~~~~~~ 213 (356)
+|...++++||+.+++| .+...++...| .+++.+|.+ |+++|+++++ +++++|+++..++
T Consensus 161 ~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~------d~~~le~~l~~~~~~~vi~ep~~~ 234 (439)
T 2oat_A 161 KGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYN------DLPALERALQDPNVAAFMVEPIQG 234 (439)
T ss_dssp TCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECSS------CHHHHHHHTTSTTEEEEEECSSBT
T ss_pred cCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCCC------CHHHHHHHhCCCCEEEEEEECCCC
Confidence 11111135777777654 44455555444 345555532 8999999994 6677777766667
Q ss_pred cccccC----CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCC-cCeeEE
Q 018437 214 LTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVGWV 288 (356)
Q Consensus 214 ~tG~~~----~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~g~g~l 288 (356)
++|.+. ++++|.++|++| |+++|+|++|.++.. .......+..-...|.+ +..|+++++ ...|++
T Consensus 235 ~~G~~~~~~~~l~~l~~l~~~~------gillI~DEv~~g~g~--~g~~~~~~~~~~~~Di~--t~sK~l~~G~~~~G~v 304 (439)
T 2oat_A 235 EAGVVVPDPGYLMGVRELCTRH------QVLFIADEIQTGLAR--TGRWLAVDYENVRPDIV--LLGKALSGGLYPVSAV 304 (439)
T ss_dssp TTTSBCCCTTHHHHHHHHHHHT------TCEEEEECTTTTTTT--TSSSSGGGGGTCCCSEE--EECGGGGTTSSCCEEE
T ss_pred CCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCcc--CCcchhHHHhCCCCcEE--EecccccCCCCCeEEE
Confidence 789765 799999999999 999999999976422 11101111111245766 456988765 568999
Q ss_pred EEeC
Q 018437 289 VWRT 292 (356)
Q Consensus 289 ~~~~ 292 (356)
+.++
T Consensus 305 ~~~~ 308 (439)
T 2oat_A 305 LCDD 308 (439)
T ss_dssp EECH
T ss_pred EECH
Confidence 8864
No 212
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.56 E-value=4.5e-14 Score=136.19 Aligned_cols=232 Identities=14% Similarity=0.083 Sum_probs=154.6
Q ss_pred HHHHHHHHHhhhcCCCCcccccccC------CCChHHHHHHHHHHhcccCC-CcccCcchHHHHHHHHHHHHHHhCCCCC
Q 018437 41 AAYQVINDELMLDGNPRLNLASFVT------TWMEPECDKLVMASINKNYV-DMDEYPVTTELQNRCVNMIAHLFNTPVA 113 (356)
Q Consensus 41 ~i~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~v~~~i~~~~~~~~~-~~~~~~~~~~le~~~~~~la~l~g~~~~ 113 (356)
.|+... +.+..+.+|..||+.++. ++..|.|+++.....+.+.. .|....|..++.+++.+++ +|-...
T Consensus 31 ~i~~l~-~~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~~~---~g~~~~ 106 (420)
T 4h51_A 31 VIFDLA-KRAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDEAVKII---YGNTVE 106 (420)
T ss_dssp HHHHHH-HHHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHH---HC---C
T ss_pred hHHHHH-HHHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHHHHHHHh---cCCCcc
Confidence 344433 334556677788876531 13347888887766655544 3667778889988876654 343321
Q ss_pred CCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeE-EEEe-cCCccccC
Q 018437 114 DDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELK-EVKL-EEGYYVMN 191 (356)
Q Consensus 114 ~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~-~v~~-~~~~~~~d 191 (356)
. .....+.|.|||.|+..++..+...+ ...+++|++|+|+|.++....+..|++.+ ..+. +++++.+|
T Consensus 107 ~-~~~~~~qt~ggtga~~~a~~~l~~~~---------~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~d 176 (420)
T 4h51_A 107 L-ENLVAVQTLSGTGAVSLGAKLLTRVF---------DAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLN 176 (420)
T ss_dssp G-GGEEEEEEEHHHHHHHHHHHHHTTTS---------CTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEEC
T ss_pred c-cccceeeecCchHHHHHHHHHHHHhc---------CCCCCEEEEecCCchhHHHHHHHcCCeEEEeeccccccccCCC
Confidence 1 12235668999999988887665321 11257899999999999999999999844 4443 34458899
Q ss_pred HHHHHHHHh---hCceEEEEecCCCccccc---CCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccc---
Q 018437 192 PVKAVELVD---ENTICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD--- 262 (356)
Q Consensus 192 ~~~L~~~i~---~~~~~v~~~~~~~~tG~~---~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~--- 262 (356)
.+.+.+.+. +++++++.++|+||||.+ +.+++|.++|+++ ++++++|.+|.++...-.. .....
T Consensus 177 ~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~------~~~~~~D~~Y~~~~~~~~~-~~~~~~~~ 249 (420)
T 4h51_A 177 FEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAK------HHQVFFDSAYQGYASGSLD-TDAYAARL 249 (420)
T ss_dssp HHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHH------TCEEEEEESCTTTTTSCHH-HHTHHHHH
T ss_pred HHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc------CceEeeehhhhhhccCCcc-cchHHHHh
Confidence 999888875 356788889999999998 5678899999999 9999999999886541000 00000
Q ss_pred ccCCCc-eEEEEcCCcC-CCCCcCeeEEEEeCC
Q 018437 263 FRLPLV-KSINVSGHKY-GLVYAGVGWVVWRTK 293 (356)
Q Consensus 263 ~~~~~~-Ds~~~~~hK~-l~~P~g~g~l~~~~~ 293 (356)
+...+. -.+.-|+.|. ++..+.+|++++..+
T Consensus 250 ~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~ 282 (420)
T 4h51_A 250 FARRGIEVLLAQSFSKNMGLYSERAGTLSLLLK 282 (420)
T ss_dssp HHHTTCCCEEEEECTTTSCCGGGCEEEEEEECS
T ss_pred HHhhCceEEEEeccccccccccCceEEEEeccc
Confidence 001111 2334467884 555688999987653
No 213
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.56 E-value=2e-13 Score=131.72 Aligned_cols=187 Identities=13% Similarity=-0.008 Sum_probs=124.1
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.+..... +. + ......++.+++++.++ +. ..+++|+||++|+..++..++...
T Consensus 69 ~~p~v~~a~~~~~~~~~~-~~-~--~~~~~~~la~~l~~~~~-~~-----~~v~~~~ggsea~~~al~~a~~~~------ 132 (427)
T 3fq8_A 69 AHPEVIEALKVAMEKGTS-FG-A--PCALENVLAEMVNDAVP-SI-----EMVRFVNSGTEACMAVLRIMRAYT------ 132 (427)
T ss_dssp TCHHHHHHHHHHHTTCSC-CS-S--CCHHHHHHHHHHHHHST-TC-----SEEEEESSHHHHHHHHHHHHHHHH------
T ss_pred CCHHHHHHHHHHHHhCCC-cC-C--CCHHHHHHHHHHHHhCC-CC-----CEEEEeCCHHHHHHHHHHHHHHhh------
Confidence 357889998888764322 11 1 33456678888999987 33 248999999999999998776431
Q ss_pred cCCCCCCCeEEecCCCcchHHH-HHHhhCCe-------------------eEEEEecCCccccCHHHHHHHHhh---Cce
Q 018437 148 QGKPYDKPNIVTGANVQVCWEK-FARYFEVE-------------------LKEVKLEEGYYVMNPVKAVELVDE---NTI 204 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~-~~~~~G~~-------------------v~~v~~~~~~~~~d~~~L~~~i~~---~~~ 204 (356)
| +++|++..++|+.+.. +....|.+ +..+|.+ |+++|++++++ +++
T Consensus 133 -~----~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~~le~~l~~~~~~~~ 201 (427)
T 3fq8_A 133 -G----RDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYN------DLEAVKALFAENPGEIA 201 (427)
T ss_dssp -C----CCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETT------CHHHHHHHHHHSTTTEE
T ss_pred -C----CCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCC------CHHHHHHHHHhCCCCEE
Confidence 1 3567776666543222 11111111 2222211 89999999986 677
Q ss_pred EEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCC
Q 018437 205 CVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL 280 (356)
Q Consensus 205 ~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~ 280 (356)
+|+++.+++++|.+.+ +++|.++|++| |+++|+|++|+++ . .......+......|.++++ |.++
T Consensus 202 ~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~------~~~li~DEv~~g~-~--~g~~~~~~~~~~~~di~t~s--K~~~ 270 (427)
T 3fq8_A 202 GVILEPIVGNSGFIVPDAGFLEGLREITLEH------DALLVFDEVITGF-R--IAYGGVQEKFGVTPDLTTLG--KIIG 270 (427)
T ss_dssp EEEECSSBCTTSCBCCCTTHHHHHHHHHHHT------TCEEEEECTTTBT-T--TBTTHHHHHTTCCCSEEEEC--GGGG
T ss_pred EEEEcCCcCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEecccccc-c--cCcchhhHhcCCCCChhhhh--hhhh
Confidence 8888888888899888 99999999999 9999999999865 2 11111111111235666655 9887
Q ss_pred CCcCeeEEEEeC
Q 018437 281 VYAGVGWVVWRT 292 (356)
Q Consensus 281 ~P~g~g~l~~~~ 292 (356)
+...+|+++.++
T Consensus 271 ~G~~~G~~~~~~ 282 (427)
T 3fq8_A 271 GGLPVGAYGGKR 282 (427)
T ss_dssp TTSSCEEEEECH
T ss_pred CCcceEEEEEcH
Confidence 666789987743
No 214
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.55 E-value=5.2e-13 Score=129.78 Aligned_cols=203 Identities=13% Similarity=0.006 Sum_probs=124.5
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.+.... ++...........++.++++++++.+. ..+++|+||++|+..++.+++..+..
T Consensus 61 ~~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~~~~~-----~~v~~~~sGseA~~~al~~~~~~~~~---- 130 (448)
T 3dod_A 61 RKKELDDAIKKQLGKIA-HSTLLGMTNVPATQLAETLIDISPKKL-----TRVFYSDSGAEAMEIALKMAFQYWKN---- 130 (448)
T ss_dssp SCHHHHHHHHHHHTTCS-CCCCSSSEEHHHHHHHHHHHHHSCTTE-----EEEEEESSHHHHHHHHHHHHHHHHHH----
T ss_pred CCHHHHHHHHHHHHhcc-CccccccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCchHHHHHHHHHHHHHHHHh----
Confidence 35788998888776432 221222334556678889999986543 24899999999999999999875322
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHhhC-------------CeeEEEEecCCcccc-----------CHHHHHHHHh---
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARYFE-------------VELKEVKLEEGYYVM-----------NPVKAVELVD--- 200 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~~G-------------~~v~~v~~~~~~~~~-----------d~~~L~~~i~--- 200 (356)
.|. ..+++|++.+++|+.+...+..++ .++..+|.+. .++. |+++|+++++
T Consensus 131 ~G~-~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~le~~l~~~~ 208 (448)
T 3dod_A 131 IGK-PEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPY-VYRSESGDPDECRDQCLRELAQLLEEHH 208 (448)
T ss_dssp TTC-TTCCEEEEEC-----------------------------CEEECCCC-CTTSSSCCHHHHHHHHHHHHHHHHHHHG
T ss_pred hCC-CCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCc-cccCCccchhhhhHHHHHHHHHHHHhCC
Confidence 111 114688888887655433332222 2344555543 2333 4899999997
Q ss_pred hCceEEEEecCC-CcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcC
Q 018437 201 ENTICVAAILGS-TLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSG 275 (356)
Q Consensus 201 ~~~~~v~~~~~~-~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~ 275 (356)
+++++|++...+ +++|.+.+ +++|.++|++| |+++|+|++|.++... .........-...|.++++
T Consensus 209 ~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~------~~~lI~DEv~~g~g~~--g~~~a~~~~~~~~di~t~s- 279 (448)
T 3dod_A 209 EEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTY------DVLMIVDEVATGFGRT--GKMFACEHENVQPDLMAAG- 279 (448)
T ss_dssp GGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHT------TCEEEEECTTTTTTTT--SSSSGGGGGTCCCSEEEEC-
T ss_pred CCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHh------CCEEEEeccccCCCcc--cchhhhhhcCCCCCEEEec-
Confidence 345666666665 77787755 99999999999 9999999999865321 1100111111235666654
Q ss_pred CcCCCCCc-CeeEEEEeC
Q 018437 276 HKYGLVYA-GVGWVVWRT 292 (356)
Q Consensus 276 hK~l~~P~-g~g~l~~~~ 292 (356)
|.+.+++ .+|+++.++
T Consensus 280 -K~l~~G~~~ig~v~~~~ 296 (448)
T 3dod_A 280 -KGITGGYLPIAVTFATE 296 (448)
T ss_dssp -GGGGTTSSCCEEEEEEH
T ss_pred -ccccCCcCceEEEEECH
Confidence 9887764 788888764
No 215
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.55 E-value=1.9e-13 Score=133.36 Aligned_cols=204 Identities=13% Similarity=-0.049 Sum_probs=131.0
Q ss_pred hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhc
Q 018437 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (356)
+|.+.+++.+.+......+...........++.++++++++.+. ..+++|+||++|+..++.+++..+.. .
T Consensus 69 ~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~-----~~v~~~~gGseA~~~al~~~~~~~~~----~ 139 (460)
T 3gju_A 69 RQKIADAIATQAKNLAYYHAYVGHGTEASITLAKMIIDRAPKGM-----SRVYFGLSGSDANETNIKLIWYYNNV----L 139 (460)
T ss_dssp CHHHHHHHHHHHHHHSCCCCCTTCCCHHHHHHHHHHHHHSCTTE-----EEEEEESSHHHHHHHHHHHHHHHHHH----T
T ss_pred CHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHhhCCCCc-----CEEEEeCchHHHHHHHHHHHHHHHHh----c
Confidence 57888888877764332232222334566678888999876554 24899999999999999999875421 1
Q ss_pred CCCCCCCeEEecCCCcchHHHHHHhh-------------CCeeEEEEecCC----ccccC--------HHHHHHHHh---
Q 018437 149 GKPYDKPNIVTGANVQVCWEKFARYF-------------EVELKEVKLEEG----YYVMN--------PVKAVELVD--- 200 (356)
Q Consensus 149 g~~~~~~~vi~s~~~h~s~~~~~~~~-------------G~~v~~v~~~~~----~~~~d--------~~~L~~~i~--- 200 (356)
|.+ .+++|++.+++++.+...+..+ +.++..+|+... +..++ +++|+++++
T Consensus 140 g~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~ 218 (460)
T 3gju_A 140 GRP-EKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEG 218 (460)
T ss_dssp TCT-TCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCC-CCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcC
Confidence 211 2467887777665433333222 124566664321 11122 689999887
Q ss_pred -hCceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcC
Q 018437 201 -ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSG 275 (356)
Q Consensus 201 -~~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~ 275 (356)
+++++|++...++++|.+.+ +++|.++|++| |+++|+|++|.++.. .......+..-...|.++++
T Consensus 219 ~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~------~~llI~DEv~~g~gr--~g~~~~~~~~~~~pdi~t~s- 289 (460)
T 3gju_A 219 PETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKY------DVLLVADEVVTGFGR--LGTMFGSDHYGIKPDLITIA- 289 (460)
T ss_dssp GGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHT------TCEEEEECTTTTTTT--TSSSCHHHHHTCCCSEEEEC-
T ss_pred CCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--ccccchHhhcCCCCCeeeee-
Confidence 45677777777777777655 99999999999 999999999987532 11000111111235677655
Q ss_pred CcCCCCC-cCeeEEEEeC
Q 018437 276 HKYGLVY-AGVGWVVWRT 292 (356)
Q Consensus 276 hK~l~~P-~g~g~l~~~~ 292 (356)
|.+.++ ..+|+++.++
T Consensus 290 -K~l~gG~~~lg~v~~~~ 306 (460)
T 3gju_A 290 -KGLTSAYAPLSGVIVAD 306 (460)
T ss_dssp -GGGTTTSSCCEEEEEEH
T ss_pred -hhhcCCCCCeEEEEECH
Confidence 987665 5789888764
No 216
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.55 E-value=1.7e-13 Score=132.36 Aligned_cols=193 Identities=10% Similarity=-0.016 Sum_probs=120.1
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.+..........+ ...++++.++++++ +. ..+++|+||++|+..++.+++...
T Consensus 70 ~~p~v~~A~~~~~~~~~~~~~~~~----~~~~l~~~la~~~~-~~-----~~v~~~~~Gsea~~~ai~~a~~~~------ 133 (429)
T 3k28_A 70 ANDRVVEALKAVAERGTSFGAPTE----IENKLAKLVIERVP-SI-----EIVRMVNSGTEATMSALRLARGYT------ 133 (429)
T ss_dssp SCHHHHHHHHHHHHHCSCCSSCCH----HHHHHHHHHHHHST-TC-----SEEEEESSHHHHHHHHHHHHHHHH------
T ss_pred CCHHHHHHHHHHHhhCcCcCCCCH----HHHHHHHHHHHhCC-CC-----CEEEEeCChHHHHHHHHHHHHHhh------
Confidence 357888988877765322222222 33456667888875 22 248999999999999999887531
Q ss_pred cCCCCCCCeEEecCCCcch-HHHHHHhhCCeeEEEEecCCcccc-------------CHHHHHHHHh---hCceEEEEec
Q 018437 148 QGKPYDKPNIVTGANVQVC-WEKFARYFEVELKEVKLEEGYYVM-------------NPVKAVELVD---ENTICVAAIL 210 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s-~~~~~~~~G~~v~~v~~~~~~~~~-------------d~~~L~~~i~---~~~~~v~~~~ 210 (356)
| +++|++.+++|+. ...++...|.++..++.....+.. |+++|+++++ +++++|++..
T Consensus 134 -~----~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep 208 (429)
T 3k28_A 134 -G----RNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVIVEP 208 (429)
T ss_dssp -T----CCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECS
T ss_pred -C----CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcC
Confidence 1 3567776665543 323222233333222221111111 8999999987 3566777777
Q ss_pred CCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCee
Q 018437 211 GSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVG 286 (356)
Q Consensus 211 ~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g 286 (356)
.++++|.+.+ +++|.++|++| |+++|+|++|.++ . .......+..-...|.++++ |.++++.++|
T Consensus 209 ~~~~~G~~~~~~~~l~~l~~l~~~~------~~~li~DEv~~g~-~--~g~~~~~~~~~~~~di~t~s--K~~~~G~~iG 277 (429)
T 3k28_A 209 VAGNMGVVPPQPGFLEGLREVTEQN------GALLIFDEVMTGF-R--VAYNCGQGYYGVTPDLTCLG--KVIGGGLPVG 277 (429)
T ss_dssp SBCTTSCBCCCTTHHHHHHHHHHHH------TCEEEEECTTTTT-T--SSTTHHHHHHTCCCSEEEEC--GGGGTTSCCE
T ss_pred CCCCCCcccCCHHHHHHHHHHHHHc------CCEEEEecccccc-c--cCcchHHHHhCCCCceehhh--hhhcCCCCeE
Confidence 7777788877 99999999999 9999999999865 2 11100011111235666654 8877778899
Q ss_pred EEEEeC
Q 018437 287 WVVWRT 292 (356)
Q Consensus 287 ~l~~~~ 292 (356)
+++.++
T Consensus 278 ~~~~~~ 283 (429)
T 3k28_A 278 AYGGKA 283 (429)
T ss_dssp EEEECH
T ss_pred EEEEcH
Confidence 988754
No 217
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.55 E-value=1.8e-13 Score=133.49 Aligned_cols=203 Identities=12% Similarity=-0.024 Sum_probs=131.6
Q ss_pred hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhc
Q 018437 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (356)
+|.+.+++.+.+.....++...........++.++++++++.+. ..+++|+||++|+..++.+++..+.. .
T Consensus 68 ~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~-----~~v~~~~ggseA~~~al~~~~~~~~~----~ 138 (459)
T 4a6r_A 68 RKDFAEAARRQMEELPFYNTFFKTTHPAVVELSSLLAEVTPAGF-----DRVFYTNSGSESVDTMIRMVRRYWDV----Q 138 (459)
T ss_dssp CHHHHHHHHHHHHHCSCCCTTSSSCCHHHHHHHHHHHHHSCTTC-----CEEEEESSHHHHHHHHHHHHHHHHHH----T
T ss_pred CHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCchHHHHHHHHHHHHHHHHh----c
Confidence 57888888887765432332222334566788889999987654 24899999999999999999875421 1
Q ss_pred CCCCCCCeEEecCCCcchHHHHHHhhC-------------CeeEEEEecC----CccccC--------HHHHHHHHh---
Q 018437 149 GKPYDKPNIVTGANVQVCWEKFARYFE-------------VELKEVKLEE----GYYVMN--------PVKAVELVD--- 200 (356)
Q Consensus 149 g~~~~~~~vi~s~~~h~s~~~~~~~~G-------------~~v~~v~~~~----~~~~~d--------~~~L~~~i~--- 200 (356)
|.+ .+++|++..++|+.+...+..++ .++..+++.. +.+ +| +++|++++.
T Consensus 139 g~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~ 216 (459)
T 4a6r_A 139 GKP-EKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIG 216 (459)
T ss_dssp TCT-TCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCC-CCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcC
Confidence 211 24678887777665443333332 1355566432 112 45 788999886
Q ss_pred -hCceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcC
Q 018437 201 -ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSG 275 (356)
Q Consensus 201 -~~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~ 275 (356)
+++++|++...++++|.+.+ +++|.++|++| |+++|+|++|.++.. ..............|.++++
T Consensus 217 ~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~------~~llI~DEv~~g~gr--~G~~~~~~~~~~~pdi~t~s- 287 (459)
T 4a6r_A 217 ADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKY------DVLLVADEVICGFGR--TGEWFGHQHFGFQPDLFTAA- 287 (459)
T ss_dssp GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHT------TCEEEEECTTTTTTT--TSSSSHHHHHTCCCSEEEEC-
T ss_pred CCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--ccccchHhhcCCCCCeeehh-
Confidence 34566666666666677666 99999999999 999999999987532 11100111111245777765
Q ss_pred CcCCCCC-cCeeEEEEeC
Q 018437 276 HKYGLVY-AGVGWVVWRT 292 (356)
Q Consensus 276 hK~l~~P-~g~g~l~~~~ 292 (356)
|.+.++ ..+|+++.++
T Consensus 288 -K~l~gg~~~lg~v~~~~ 304 (459)
T 4a6r_A 288 -KGLSSGYLPIGAVFVGK 304 (459)
T ss_dssp -GGGGTTSSCCEEEEECH
T ss_pred -hhhcCCCCCccceeeCH
Confidence 877655 6788888753
No 218
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.55 E-value=2.1e-13 Score=131.69 Aligned_cols=196 Identities=15% Similarity=-0.050 Sum_probs=125.5
Q ss_pred hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhc
Q 018437 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (356)
+|.+.+++.+.+.........+ ......++.+.+++++|.+. ..+++|+||++|+..++.+++.. .
T Consensus 61 ~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~l~~~la~~~~~~~-----~~v~~~~gg~ea~~~a~~~~~~~-~------ 126 (433)
T 1zod_A 61 HPEIVSVIGEYAGKLDHLFSEM--LSRPVVDLATRLANITPPGL-----DRALLLSTGAESNEAAIRMAKLV-T------ 126 (433)
T ss_dssp CHHHHHHHHHHHHHCCCCCTTC--CCHHHHHHHHHHHHHSCTTC-----CEEEEESCHHHHHHHHHHHHHHH-H------
T ss_pred CHHHHHHHHHHHHhCccccccc--CCHHHHHHHHHHHHhCCCCc-----CEEEEeCchHHHHHHHHHHHHHh-h------
Confidence 5788888887775432111112 22455677788999998764 24899999999999999877542 1
Q ss_pred CCCCCCCeEEecCCCcch-HHHHHHhh-----------CCeeEEEEecCC-----------ccccCHHHHHHHHhh----
Q 018437 149 GKPYDKPNIVTGANVQVC-WEKFARYF-----------EVELKEVKLEEG-----------YYVMNPVKAVELVDE---- 201 (356)
Q Consensus 149 g~~~~~~~vi~s~~~h~s-~~~~~~~~-----------G~~v~~v~~~~~-----------~~~~d~~~L~~~i~~---- 201 (356)
| +++|++.+++|+. ...+.... ..+++.++++.. .+.+|+++|++++++
T Consensus 127 ~----~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 202 (433)
T 1zod_A 127 G----KYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSG 202 (433)
T ss_dssp T----CCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCS
T ss_pred C----CCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCC
Confidence 1 3578877776543 32222221 124566665321 023579999999973
Q ss_pred CceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCc
Q 018437 202 NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHK 277 (356)
Q Consensus 202 ~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK 277 (356)
++++|+++..++++|.+.+ +++|.++|++| |+++|+|++|.++.. .......+......|.+++ .|
T Consensus 203 ~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~------~~~li~DEv~~~~g~--~g~~~~~~~~~~~~di~s~--sK 272 (433)
T 1zod_A 203 NLAAFIAEPILSSGGIIELPDGYMAALKRKCEAR------GMLLILDEAQTGVGR--TGTMFACQRDGVTPDILTL--SK 272 (433)
T ss_dssp CEEEEEECSEETTTTCEECCTTHHHHHHHHHHHH------TCEEEEECTTTTTTT--TSSSSTHHHHTCCCSEEEE--CH
T ss_pred CeEEEEEccccCCCCcccCCHHHHHHHHHHHHHh------CCEEEEeccccCCCc--CchHhHHhhcCCCCCEEEe--cc
Confidence 5556665544577897655 99999999999 999999999986432 1110111111123566654 48
Q ss_pred CCCCCcCeeEEEEeC
Q 018437 278 YGLVYAGVGWVVWRT 292 (356)
Q Consensus 278 ~l~~P~g~g~l~~~~ 292 (356)
.++++.++|+++.++
T Consensus 273 ~~~~G~~ig~~~~~~ 287 (433)
T 1zod_A 273 TLGAGLPLAAIVTSA 287 (433)
T ss_dssp HHHTTSSCEEEEECH
T ss_pred cccCCCCeeEEEEhH
Confidence 876677899998864
No 219
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.54 E-value=2.9e-13 Score=132.64 Aligned_cols=204 Identities=13% Similarity=0.018 Sum_probs=131.9
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.+......+...........++.++++++++.+. ..+++++||++|+..++++++..+..
T Consensus 72 ~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~-----~~v~~~~sGseA~~~aik~a~~~~~~---- 142 (472)
T 3hmu_A 72 GRDELAEVAARQMRELPYYNTFFKTTHVPAIALAQKLAELAPGDL-----NHVFFAGGGSEANDTNIRMVRTYWQN---- 142 (472)
T ss_dssp CCHHHHHHHHHHHHHCSCCCSSSSEECHHHHHHHHHHHHHSCTTE-----EEEEEESSHHHHHHHHHHHHHHHHHH----
T ss_pred CCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCHHHHHHHHHHHHHHHHHh----
Confidence 357899998887765332222222334455678888999986643 24899999999999999999875421
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHhhCC------------eeEEEEecCCccc----cC--------HHHHHHHHh---
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARYFEV------------ELKEVKLEEGYYV----MN--------PVKAVELVD--- 200 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~~G~------------~v~~v~~~~~~~~----~d--------~~~L~~~i~--- 200 (356)
.|.+ .+.+||+..+++..+...+..++. ++..++... .++ .| +++|+++++
T Consensus 143 ~g~~-~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~-~~~~~~~~~~~~~~~~~~~~le~~i~~~~ 220 (472)
T 3hmu_A 143 KGQP-EKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPN-WWAEGGDMDPEEFGLARARELEEAILELG 220 (472)
T ss_dssp TTCT-TCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCC-HHHHCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred cCCC-CCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCc-cccCCcccCHHHHHHHHHHHHHHHHHhcC
Confidence 1211 245777777665543333333222 355666432 112 34 788999886
Q ss_pred -hCceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcC
Q 018437 201 -ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSG 275 (356)
Q Consensus 201 -~~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~ 275 (356)
+++++|++...++++|.+.+ +++|.++|+++ |+++|+|++|.++.. ..........-...|.++++
T Consensus 221 ~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~------gillI~DEv~~gfgr--~G~~~a~~~~~v~pdi~t~s- 291 (472)
T 3hmu_A 221 ENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKY------DILLIADEVICGFGR--TGNWFGTQTMGIRPHIMTIA- 291 (472)
T ss_dssp GGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHT------TCEEEEECTTTTTTT--TSSSCHHHHHTCCCSEEEEC-
T ss_pred CCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHc------CCEEEEEccccCCcc--cCccchhHHhCCCCceeeec-
Confidence 45667777777777788776 99999999999 999999999987533 11000111111245777765
Q ss_pred CcCCCCC-cCeeEEEEeC
Q 018437 276 HKYGLVY-AGVGWVVWRT 292 (356)
Q Consensus 276 hK~l~~P-~g~g~l~~~~ 292 (356)
|.+.++ ..+|+++.++
T Consensus 292 -K~l~gg~~plG~v~~~~ 308 (472)
T 3hmu_A 292 -KGLSSGYAPIGGSIVCD 308 (472)
T ss_dssp -GGGTTTSSCCEEEEEEH
T ss_pred -hhhhcCCcceEEEEECH
Confidence 987665 5788888764
No 220
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.53 E-value=6.3e-13 Score=129.37 Aligned_cols=204 Identities=11% Similarity=-0.042 Sum_probs=125.8
Q ss_pred ChHHHH-H-HHHH---HhcccCCCcccCcchHHHHHHHHHHHHHHhC-CCCCCCCCCCeEEeCChhHHHHHHHHHHHHHH
Q 018437 68 MEPECD-K-LVMA---SINKNYVDMDEYPVTTELQNRCVNMIAHLFN-TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (356)
Q Consensus 68 ~~~~v~-~-~i~~---~~~~~~~~~~~~~~~~~le~~~~~~la~l~g-~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~ 141 (356)
.+|.+. + ++.+ .+.... ++.. ....+...++.+.++++++ .+. ..+++|+||++|+..++.+++...
T Consensus 71 ~~p~v~~~~A~~~~~~~~~~~~-~~~~-~~~~~~~~~la~~la~~~~~~~~-----~~v~~~~~gseA~~~aik~a~~~~ 143 (449)
T 2cjg_A 71 NPPALVDDREFHAELMQAALNK-PSNS-DVYSVAMARFVETFARVLGDPAL-----PHLFFVEGGALAVENALKAAFDWK 143 (449)
T ss_dssp SCHHHHTCHHHHHHHHHHHTCC-CCTT-TCCCHHHHHHHHHHHHHHCCTTC-----CEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcC-CCCc-ccCCHHHHHHHHHHHHhcCCCCC-----CEEEEeCchHHHHHHHHHHHHHHh
Confidence 357888 8 8887 554332 1111 1223345567778888887 222 348999999999999999876432
Q ss_pred HHHHHhcCCCCC-CCeEEecCCCcchHHHH-HHhh--------CC-----eeEEEEecC--Cc-------cccCHHHHHH
Q 018437 142 QQKRKEQGKPYD-KPNIVTGANVQVCWEKF-ARYF--------EV-----ELKEVKLEE--GY-------YVMNPVKAVE 197 (356)
Q Consensus 142 ~~~~~~~g~~~~-~~~vi~s~~~h~s~~~~-~~~~--------G~-----~v~~v~~~~--~~-------~~~d~~~L~~ 197 (356)
..+....|.+.. +++||+..++|+.+... .... +. +++.+|.++ .. ...|+++|++
T Consensus 144 ~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~ 223 (449)
T 2cjg_A 144 SRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARA 223 (449)
T ss_dssp HHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHH
Confidence 211000111111 46888888766543221 1211 22 456666643 11 1367788999
Q ss_pred HHh---hCceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceE
Q 018437 198 LVD---ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKS 270 (356)
Q Consensus 198 ~i~---~~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds 270 (356)
+++ +++++|+++..+|++|.+.+ +++|.++|++| |+++|+|++|.++.. ..............|.
T Consensus 224 ~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~------g~lli~DEv~~g~g~--~g~~~~~~~~~~~~di 295 (449)
T 2cjg_A 224 AFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEF------DALLIFDEVQTGCGL--TGTAWAYQQLDVAPDI 295 (449)
T ss_dssp HHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHT------TCEEEEECTTTTTTT--TSSSSTHHHHTCCCSE
T ss_pred HHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHC------CcEEEEeccccCCCc--cCcceeecccCCCceE
Confidence 995 56778877777788997766 99999999999 999999999986432 1110011111124577
Q ss_pred EEEcCCcCCCCCcCeeEEEEeC
Q 018437 271 INVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 271 ~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
++++ |++ | +|+++.++
T Consensus 296 ~t~s--K~l--~--iG~~~~~~ 311 (449)
T 2cjg_A 296 VAFG--KKT--Q--VCGVMAGR 311 (449)
T ss_dssp EEEC--GGG--S--SEEEEECG
T ss_pred EEec--Ccc--c--EEEEEECH
Confidence 7654 987 4 68888764
No 221
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.52 E-value=2.1e-13 Score=133.07 Aligned_cols=204 Identities=12% Similarity=-0.030 Sum_probs=131.7
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.+...... ...........+++++++++++.+. ..+++|+||++|+..++.+++..+..+
T Consensus 92 ~~p~v~~A~~~~~~~~~~~-~~~~~~~~~~~~L~e~la~~~~~~~-----~~v~~~~sGseA~~~Alk~a~~~~~~~--- 162 (457)
T 3tfu_A 92 GHPALDQALTTQLRVMNHV-MFGGLTHEPAARLAKLLVDITPAGL-----DTVFFSDSGSVSVEVAAKMALQYWRGR--- 162 (457)
T ss_dssp TCHHHHHHHHHHHHHCSCC-CSSSEECHHHHHHHHHHHHHSSTTE-----EEEEEESSHHHHHHHHHHHHHHHHHHT---
T ss_pred CCHHHHHHHHHHHHhccCc-cccccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCcHHHHHHHHHHHHHHHHHhc---
Confidence 3578888888777543221 1111223445578888999997654 248999999999999999998754321
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHhh--------------CCeeEEEEecCC-ccccCHHHHHHHHh---hCceEEEEe
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARYF--------------EVELKEVKLEEG-YYVMNPVKAVELVD---ENTICVAAI 209 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~~--------------G~~v~~v~~~~~-~~~~d~~~L~~~i~---~~~~~v~~~ 209 (356)
|.+ ++.+||+.+++|+.....+..+ ..++..+|.... ....|+++|+++++ +++++|++.
T Consensus 163 -g~~-g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~~~aavi~e 240 (457)
T 3tfu_A 163 -GLP-GKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAGELAAVVVE 240 (457)
T ss_dssp -TCT-TCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGGGEEEEEEC
T ss_pred -CCC-CCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 211 1346777666654432222222 224555555322 12358899999998 567788888
Q ss_pred c-CCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCC-c
Q 018437 210 L-GSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-A 283 (356)
Q Consensus 210 ~-~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~ 283 (356)
. +++++|.+.+ +++|.++|++| |+++|+|++|.++.. .......+..-...|.+++ .|.+.++ .
T Consensus 241 p~~~~~~G~~~~~~~~l~~l~~l~~~~------gillI~DEv~~g~gr--~G~~~a~~~~~~~pdiit~--sK~l~gG~~ 310 (457)
T 3tfu_A 241 PVVQGAGGMRFHDPRYLHDLRDICRRY------EVLLIFDEIATGFGR--TGALFAADHAGVSPDIMCV--GKALTGGYL 310 (457)
T ss_dssp SSEECTTTCEECCTHHHHHHHHHHHHH------TCEEEEECTTTTTTT--TSSSSTHHHHTCCCSEEEE--CGGGGTTSS
T ss_pred CCCcCCCCcccCCHHHHHHHHHHHHHc------CCEEEEEcCccCCcc--ccchhHhHhcCCCceEEEE--ChhhhCCCc
Confidence 7 7899998865 99999999999 999999999987432 1110011111124577755 4887665 4
Q ss_pred CeeEEEEeC
Q 018437 284 GVGWVVWRT 292 (356)
Q Consensus 284 g~g~l~~~~ 292 (356)
..|+++.++
T Consensus 311 ~lG~v~~~~ 319 (457)
T 3tfu_A 311 SLAATLCTA 319 (457)
T ss_dssp CCEEEEEEH
T ss_pred ceEEEEEcH
Confidence 789888865
No 222
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.51 E-value=4.7e-13 Score=131.28 Aligned_cols=204 Identities=12% Similarity=-0.087 Sum_probs=131.4
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.+......+. +........++.++++++++.+. ..+++++||++|+..++.+++..+..
T Consensus 71 ~~p~v~~A~~~~l~~~~~~~~-~~~~~~~~~~la~~l~~~~~~~~-----~~v~~~~sGseA~~~Aik~a~~~~~~---- 140 (476)
T 3i5t_A 71 GRREIVDAMAHQAMVLPYASP-WYMATSPAARLAEKIATLTPGDL-----NRIFFTTGGSTAVDSALRFSEFYNNV---- 140 (476)
T ss_dssp CCHHHHHHHHHHHHHCCCCCT-TTCBCHHHHHHHHHHHTTSSTTC-----CEEEEESSHHHHHHHHHHHHHHHHHH----
T ss_pred CCHHHHHHHHHHHHhccCccc-CccCCHHHHHHHHHHHhcCCCCc-----CEEEEeCchHHHHHHHHHHHHHHHHh----
Confidence 357888988877764322221 12334566688889999986554 24899999999999999999876532
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHhhCC-------------eeEEEEecCC-cc-ccC--------HHHHHHHHh----
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARYFEV-------------ELKEVKLEEG-YY-VMN--------PVKAVELVD---- 200 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~~G~-------------~v~~v~~~~~-~~-~~d--------~~~L~~~i~---- 200 (356)
.|. .++++||+..++|+.+...+..++. ++..++.... .. ..| +++|+++++
T Consensus 141 ~g~-~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~ 219 (476)
T 3i5t_A 141 LGR-PQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGP 219 (476)
T ss_dssp TTC-TTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCG
T ss_pred cCC-CCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCC
Confidence 121 1245777777766544333332221 2445553221 01 122 788999886
Q ss_pred hCceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCccc-ccCCCceEEEEcC
Q 018437 201 ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINVSG 275 (356)
Q Consensus 201 ~~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~Ds~~~~~ 275 (356)
+++++|++..++++.|.+.+ +++|.++|++| |+++|+|++|.++.. ........ ..-...|.++++
T Consensus 220 ~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~------gillI~DEv~~g~gr--~G~~~~~~~~~~v~pdi~t~s- 290 (476)
T 3i5t_A 220 DTIAAFLAEPILASGGVIIPPAGYHARFKAICEKH------DILYISDEVVTGFGR--CGEWFASEKVFGVVPDIITFA- 290 (476)
T ss_dssp GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHT------TCEEEEECTTTTTTT--TSSSCHHHHTTCCCCSEEEEC-
T ss_pred CCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHc------CCEEEEEecccCCcc--ccCceeeecccCCCcchhhhh-
Confidence 45678888888888887655 99999999999 999999999987532 11100111 111135777765
Q ss_pred CcCCCCC-cCeeEEEEeC
Q 018437 276 HKYGLVY-AGVGWVVWRT 292 (356)
Q Consensus 276 hK~l~~P-~g~g~l~~~~ 292 (356)
|.+.++ ...|+++.++
T Consensus 291 -K~l~~G~~plg~v~~~~ 307 (476)
T 3i5t_A 291 -KGVTSGYVPLGGLAISE 307 (476)
T ss_dssp -GGGGTTSSCCEEEEECH
T ss_pred -hhhcCCCcCeEEEEECH
Confidence 888776 6788888754
No 223
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.51 E-value=2.5e-13 Score=131.35 Aligned_cols=187 Identities=13% Similarity=-0.084 Sum_probs=121.8
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.+.... .+ . .......++.++++++++ .. ..+++|+||++|+..++.+++...
T Consensus 73 ~~~~v~~a~~~~~~~~~-~~-~--~~~~~~~~l~~~la~~~~-~~-----~~v~~~~sgseA~~~al~~ar~~~------ 136 (434)
T 2epj_A 73 KHPRVLEAVEEALARGW-LY-G--APGEAEVLLAEKILGYVK-RG-----GMIRFVNSGTEATMTAIRLARGYT------ 136 (434)
T ss_dssp TCHHHHHHHHHHHHTCS-CC-S--SCCHHHHHHHHHHHHHHC-TT-----CEEEEESSHHHHHHHHHHHHHHHH------
T ss_pred CCHHHHHHHHHHHHhCC-CC-C--CCCHHHHHHHHHHHHhCC-CC-----CEEEEeCCHHHHHHHHHHHHHHhh------
Confidence 45788898888776432 11 1 123455677888888884 22 238999999999999999865321
Q ss_pred cCCCCCCCeEEecCCCcchHHHHH-H-------------hhCC------eeEEEEecCCccccCHHHHHHHHhh---Cce
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFA-R-------------YFEV------ELKEVKLEEGYYVMNPVKAVELVDE---NTI 204 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~-~-------------~~G~------~v~~v~~~~~~~~~d~~~L~~~i~~---~~~ 204 (356)
.+++||+.+++|+.+...+ . ..|+ .+..+|. .|+++|++++++ +++
T Consensus 137 -----~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~------~d~~~le~~l~~~~~~~~ 205 (434)
T 2epj_A 137 -----GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY------NDVEALERVFAEYGDRIA 205 (434)
T ss_dssp -----CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET------TCHHHHHHHHHHHGGGEE
T ss_pred -----CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC------CCHHHHHHHHHhCCCCEE
Confidence 1356777766654422211 1 1232 2344442 289999999974 567
Q ss_pred EEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCC
Q 018437 205 CVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL 280 (356)
Q Consensus 205 ~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~ 280 (356)
+|+++..++++|.+.| +++|.++|++| |+++|+|++|+++ . .......+..-...|.++ .+|+++
T Consensus 206 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~------g~~lI~DEv~~g~-~--~g~~~~~~~~~~~~di~s--~sK~l~ 274 (434)
T 2epj_A 206 GVIVEPVIANAGVIPPRREFLAALQRLSRES------GALLILDEVVTGF-R--LGLEGAQGYFNIEGDIIV--LGKIIG 274 (434)
T ss_dssp EEEECSSBCSSSCBCCCHHHHHHHHHHHHHH------TCEEEEEETTTTT-T--SSTTHHHHHHTCCCSEEE--EEGGGG
T ss_pred EEEEeCCcCCCCccCCCHHHHHHHHHHHHHc------CCEEEEEcchhce-e--CCcchhhHHhCCCCCeee--ecchhc
Confidence 7776666677999888 99999999999 9999999999864 2 111001111111356654 459887
Q ss_pred CCcCeeEEEEeC
Q 018437 281 VYAGVGWVVWRT 292 (356)
Q Consensus 281 ~P~g~g~l~~~~ 292 (356)
+...+|+++.++
T Consensus 275 ~G~~~G~v~~~~ 286 (434)
T 2epj_A 275 GGFPVGAVAGSR 286 (434)
T ss_dssp TTSSCEEEEECH
T ss_pred CCcceeeeeecH
Confidence 666789998764
No 224
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.51 E-value=7.3e-13 Score=128.86 Aligned_cols=187 Identities=12% Similarity=-0.014 Sum_probs=119.5
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.+.... .+ ....+++.++.+++++.++ +. ..+++|+||++|+..++.+++...
T Consensus 74 ~~~~v~~a~~~~~~~~~-~~---~~~~~~~~~la~~l~~~~~-~~-----~~v~~~~gg~eA~~~al~~ar~~~------ 137 (453)
T 2cy8_A 74 GHPRVNAAIAEALSHGV-QY---AASHPLEVRWAERIVAAFP-SI-----RKLRFTGSGTETTLLALRVARAFT------ 137 (453)
T ss_dssp TCHHHHHHHHHHHTTTC-SS---CSSCHHHHHHHHHHHHHCT-TC-----SEEEEESCHHHHHHHHHHHHHHHH------
T ss_pred CCHHHHHHHHHHHHhCC-CC---CCCCHHHHHHHHHHHhhCC-CC-----CEEEEeCCHHHHHHHHHHHHHHhh------
Confidence 45788999888876422 11 2345688899999999885 33 248999999999999999865321
Q ss_pred cCCCCCCCeEEecCCCcchHHHHHHh-----------hCCe------eEEEEecCCccccCHHHHHHHHhh---CceEEE
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFARY-----------FEVE------LKEVKLEEGYYVMNPVKAVELVDE---NTICVA 207 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~~~-----------~G~~------v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~ 207 (356)
.+++||+.+++|+.+...+.. .|+. +..+| + .|+++|++++++ ++++|+
T Consensus 138 -----~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----~-~d~~~le~~l~~~~~~~~~vi 206 (453)
T 2cy8_A 138 -----GRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIR-----P-DDIEGMREVFANHGSDIAAFI 206 (453)
T ss_dssp -----CCCEEEEECC----------------------------CGGGEEEEC-----T-TCHHHHHHHHHHHGGGEEEEE
T ss_pred -----CCCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecC-----C-CCHHHHHHHHHhcCCCEEEEE
Confidence 135677777766543322111 1331 22222 1 389999999973 566776
Q ss_pred EecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCc
Q 018437 208 AILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA 283 (356)
Q Consensus 208 ~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~ 283 (356)
++..++++|.+.| +++|.++|++| |+++++|++|+++ . .......+..-...|.++ ..|+++++.
T Consensus 207 ~ep~~~~tG~~~~~~~~l~~l~~l~~~~------g~~lI~DEv~~g~-~--~g~~~~~~~~~~~~di~s--~sK~l~~G~ 275 (453)
T 2cy8_A 207 AEPVGSHFGVTPVSDSFLREGAELARQY------GALFILDEVISGF-R--VGNHGMQALLDVQPDLTC--LAKASAGGL 275 (453)
T ss_dssp ECSSEHHHHTEECCHHHHHHHHHHHHHT------TCEEEEECTTTTT-T--TCTTHHHHHHTCCCSEEE--EEGGGGTTS
T ss_pred ECCCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEecCcccc-c--cCchhhhHHhCCCCcEEE--EChhhhCCc
Confidence 6666677998877 99999999999 9999999999864 2 111001111111356654 459887767
Q ss_pred CeeEEEEeC
Q 018437 284 GVGWVVWRT 292 (356)
Q Consensus 284 g~g~l~~~~ 292 (356)
++|+++.++
T Consensus 276 ~~G~v~~~~ 284 (453)
T 2cy8_A 276 PGGILGGRE 284 (453)
T ss_dssp SCEEEEECH
T ss_pred ceEEEechH
Confidence 889998864
No 225
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.50 E-value=9.4e-13 Score=128.29 Aligned_cols=198 Identities=10% Similarity=-0.039 Sum_probs=124.8
Q ss_pred hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhc
Q 018437 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (356)
+|.+.+++.+.+.... ++.......+...+++++++++++.+. ...+++|+||+||+..+++.++...
T Consensus 82 ~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~~~~~----~~~v~~~~sGseA~~~alk~a~~~~------- 149 (453)
T 4ffc_A 82 HPAVAAAIADQATHFT-HTCFMVTPYEQYVQVAELLNALTPGDH----DKRTALFNSGAEAVENAIKVARLAT------- 149 (453)
T ss_dssp CHHHHHHHHHHHHHCS-CCTTTTSCCHHHHHHHHHHHHHSSCSS----CEEEEEESSHHHHHHHHHHHHHHHH-------
T ss_pred CHHHHHHHHHHHHhcc-ccccCcCCCHHHHHHHHHHHHhCCCCC----CcEEEEeCcHHHHHHHHHHHHHHhc-------
Confidence 5788888887776432 222222334556678888999987542 1248999999999999998876531
Q ss_pred CCCCCCCeEEecCCCcchHHHHHHhhC--------------CeeEEEEecCC-----------ccccCHHHHHHHHhhCc
Q 018437 149 GKPYDKPNIVTGANVQVCWEKFARYFE--------------VELKEVKLEEG-----------YYVMNPVKAVELVDENT 203 (356)
Q Consensus 149 g~~~~~~~vi~s~~~h~s~~~~~~~~G--------------~~v~~v~~~~~-----------~~~~d~~~L~~~i~~~~ 203 (356)
| +++|++.+++|+.+...+..++ .++..+|+... .+..+++.|++++.+++
T Consensus 150 g----~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~ 225 (453)
T 4ffc_A 150 G----RPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQS 225 (453)
T ss_dssp C----CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGG
T ss_pred C----CCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCC
Confidence 1 4577777776654333332221 14667776421 11222466777765555
Q ss_pred eEEEEecCCCccc-ccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcC
Q 018437 204 ICVAAILGSTLTG-EFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKY 278 (356)
Q Consensus 204 ~~v~~~~~~~~tG-~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~ 278 (356)
.+++++.|++++| .+.+ +++|.++|++| |+++|+|++|.++.. .......+..-...|.++++ |.
T Consensus 226 ~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~------~~llI~DEv~~g~g~--~g~~~a~~~~~~~pdi~t~s--K~ 295 (453)
T 4ffc_A 226 LAAIIIEPIQGEGGFIVPAPGFLATLTAWASEN------GVVFIADEVQTGFAR--TGAWFASEHEGIVPDIVTMA--KG 295 (453)
T ss_dssp EEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHH------TCEEEEECTTTTTTT--TSSSSTHHHHTCCCSEEEEC--GG
T ss_pred EEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHc------CCEEEEecCccCCCc--ccccchhhhcCCCcchHhhh--hh
Confidence 5666667777665 4444 99999999999 999999999987532 11100111111235666655 98
Q ss_pred CCCCcCeeEEEEeC
Q 018437 279 GLVYAGVGWVVWRT 292 (356)
Q Consensus 279 l~~P~g~g~l~~~~ 292 (356)
++++..+|+++.++
T Consensus 296 ~~~G~~~G~~~~~~ 309 (453)
T 4ffc_A 296 IAGGMPLSAVTGRA 309 (453)
T ss_dssp GGTTSSCEEEEEEH
T ss_pred hcCCcCeEEEEECH
Confidence 77778889988764
No 226
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.48 E-value=3.6e-12 Score=122.97 Aligned_cols=193 Identities=12% Similarity=0.028 Sum_probs=114.0
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.+....... ++ .....++.++++++++ +. ..+++|+||++|+..++..++...
T Consensus 70 ~~p~v~~A~~~~~~~~~~~~--~~--~~~~~~la~~l~~~~~-~~-----~~v~~~~sGsea~~~al~~a~~~~------ 133 (429)
T 4e77_A 70 NHPAIRQAVIEAVERGLSFG--AP--TEMEVKMAQLVTDLVP-TM-----DMVRMVNSGTEATMSAIRLARGYT------ 133 (429)
T ss_dssp TCHHHHHHHHHHHTTCSCCS--SC--CHHHHHHHHHHHHHST-TC-----SEEEEESSHHHHHHHHHHHHHHHH------
T ss_pred CCHHHHHHHHHHHHhCcccC--CC--CHHHHHHHHHHHhhCC-CC-----CEEEEeCcHHHHHHHHHHHHHHhh------
Confidence 35889999988876532211 22 2345567778888886 32 248999999999999999876431
Q ss_pred cCCCCCCCeEEecCCCcch-HHHHHHhhCCeeE--EEEecCC----------cc-ccCHHHHHHHHhh---CceEEEEec
Q 018437 148 QGKPYDKPNIVTGANVQVC-WEKFARYFEVELK--EVKLEEG----------YY-VMNPVKAVELVDE---NTICVAAIL 210 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s-~~~~~~~~G~~v~--~v~~~~~----------~~-~~d~~~L~~~i~~---~~~~v~~~~ 210 (356)
+ +++|++..+.|+. ...++...|.... ..|.... .. .-|+++|++++++ ++++|+++.
T Consensus 134 -~----~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep 208 (429)
T 4e77_A 134 -G----RDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEVACIIVEP 208 (429)
T ss_dssp -C----CCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTEEEEEECS
T ss_pred -C----CCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCCEEEEEECC
Confidence 1 3566666555443 3222211111110 0111000 00 1189999999974 455565554
Q ss_pred CCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCee
Q 018437 211 GSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVG 286 (356)
Q Consensus 211 ~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g 286 (356)
.++.+|.+.+ +++|.++|++| |+++|+|++|.++ . .......+..-...|.++++ |.++++.+.|
T Consensus 209 ~~~~~g~~~~~~~~l~~l~~l~~~~------~~lli~DEv~~g~-r--~g~~~~~~~~~~~pdi~t~s--K~~~~G~~~G 277 (429)
T 4e77_A 209 VAGNMNCIPPLPEFLPGLRALCDEF------GALLIIDEVMTGF-R--VALAGAQDYYHVIPDLTCLG--KIIGGGMPVG 277 (429)
T ss_dssp SBCTTSCBCCCTTHHHHHHHHHHHH------TCEEEEEETTTBT-T--TBTTCHHHHTTCCCSEEEEE--GGGGTTSCCE
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCc-c--cCcchHHHhcCCCCCeeeec--ccccCCCCeE
Confidence 4455667777 99999999999 9999999999865 2 11111111111134666544 9887777889
Q ss_pred EEEEeC
Q 018437 287 WVVWRT 292 (356)
Q Consensus 287 ~l~~~~ 292 (356)
+++.++
T Consensus 278 ~~~~~~ 283 (429)
T 4e77_A 278 AFGGRR 283 (429)
T ss_dssp EEEECH
T ss_pred EEEECH
Confidence 887753
No 227
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.48 E-value=3.6e-12 Score=124.02 Aligned_cols=197 Identities=14% Similarity=0.022 Sum_probs=122.0
Q ss_pred hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhc
Q 018437 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (356)
+|.+.+++.+.+... .++.......+...++.++++++++.+. ...+++|+||++|+..++++++...
T Consensus 79 ~p~v~~A~~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~~~~----~~~v~~~~sGseA~~~Alk~a~~~~------- 146 (451)
T 3oks_A 79 APKVVEAVRSQVGDF-THTCFMVTPYEGYVAVCEQLNRLTPVRG----DKRSALFNSGSEAVENAVKIARSHT------- 146 (451)
T ss_dssp CHHHHHHHHHHHTTC-SCCTTTTSCCHHHHHHHHHHHHHSSCCS----SEEEEEESSHHHHHHHHHHHHHHHH-------
T ss_pred CHHHHHHHHHHHHhc-ccccCCccCCHHHHHHHHHHHHhCCcCC----CCEEEEeCcHHHHHHHHHHHHHHhc-------
Confidence 578899888877643 2222222334556678888999987432 1248999999999999998887531
Q ss_pred CCCCCCCeEEecCCCcchHHHHHHhhC--------------CeeEEEEecCCccc-------------cCHHHHHHHHh-
Q 018437 149 GKPYDKPNIVTGANVQVCWEKFARYFE--------------VELKEVKLEEGYYV-------------MNPVKAVELVD- 200 (356)
Q Consensus 149 g~~~~~~~vi~s~~~h~s~~~~~~~~G--------------~~v~~v~~~~~~~~-------------~d~~~L~~~i~- 200 (356)
| +++|++..++|+.+...+..++ .++..+|+... ++ -+++.+++.+.
T Consensus 147 g----~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~l~~ 221 (451)
T 3oks_A 147 H----KPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYP-FRDAEFGKELATDGELAAKRAITVIDK 221 (451)
T ss_dssp C----CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCH-HHHGGGCTTTTTCHHHHHHHHHHHHHH
T ss_pred C----CCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCcc-ccccccccccchhhHHHHHHHHHHHHh
Confidence 1 4577777766554333332221 24677776521 11 13455555554
Q ss_pred ---hCceEEEEecCCCcc-cccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEE
Q 018437 201 ---ENTICVAAILGSTLT-GEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSIN 272 (356)
Q Consensus 201 ---~~~~~v~~~~~~~~t-G~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~ 272 (356)
+++.+++++.|++++ |.+.+ +++|.++|++| |+++|+|++|.++.. .......+..-...|.++
T Consensus 222 ~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~------g~~lI~DEv~~g~g~--~g~~~~~~~~~~~pdi~t 293 (451)
T 3oks_A 222 QIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKN------DVVFIADEVQTGFAR--TGAMFACEHEGIDPDLIV 293 (451)
T ss_dssp HTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHT------TCEEEEECTTTTTTT--TSSSSGGGGGTCCCSEEE
T ss_pred hcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHc------CCEEEEEecccCCCc--cccchhhhhcCCCCCeee
Confidence 244455555555555 55545 99999999999 999999999986532 111011111112356666
Q ss_pred EcCCcCCCCCcCeeEEEEeC
Q 018437 273 VSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 273 ~~~hK~l~~P~g~g~l~~~~ 292 (356)
++ |.+++++.+|+++.++
T Consensus 294 ~s--K~l~~G~~iG~v~~~~ 311 (451)
T 3oks_A 294 TA--KGIAGGLPLSAVTGRA 311 (451)
T ss_dssp EC--GGGGTTSSCEEEEEEH
T ss_pred eh--hhhhCCcceEEEEECH
Confidence 54 9887778889988764
No 228
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.45 E-value=4.5e-13 Score=128.05 Aligned_cols=194 Identities=10% Similarity=0.001 Sum_probs=128.3
Q ss_pred cccccccCCCChH-HHHHHHHHHh--cc--cCCCcccCcch-----HHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChh
Q 018437 58 LNLASFVTTWMEP-ECDKLVMASI--NK--NYVDMDEYPVT-----TELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (356)
Q Consensus 58 ~~l~~~~~~~~~~-~v~~~i~~~~--~~--~~~~~~~~~~~-----~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt 127 (356)
++|..+.+.++.+ .+.+++.... .. ....|....+. .++++++.+++. ..|++... ...+++|+|++
T Consensus 25 i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~--~~~i~~t~G~~ 101 (391)
T 3bwn_A 25 VNLDHGDPTAYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATE--DRYIVVGTGST 101 (391)
T ss_dssp EECSSCCCGGGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCS--SSEEEEEEHHH
T ss_pred eEcCCCCCCCCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCC--CCeEEEeCChH
Confidence 4555555544333 3444432222 11 22345455566 888888888876 45665321 13589999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCC----eEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCc
Q 018437 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKP----NIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENT 203 (356)
Q Consensus 128 ~a~~~al~~~~~~~~~~~~~~g~~~~~~----~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~ 203 (356)
+++.+++.++.++ ++ +|+++.|+|..+...++..|++++.+++|.+.. + .+++
T Consensus 102 ~al~~~~~~l~~~-------------Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l--~--------~~~~ 158 (391)
T 3bwn_A 102 QLCQAAVHALSSL-------------ARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAWGF--D--------KKGP 158 (391)
T ss_dssp HHHHHHHHHHHHT-------------SSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEESTTC--C--------CCSC
T ss_pred HHHHHHHHHhcCC-------------CCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCHHHc--C--------CCCC
Confidence 9999999988653 45 899999999999999999999999999886422 2 2568
Q ss_pred eEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCC-CC
Q 018437 204 ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VY 282 (356)
Q Consensus 204 ~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~-~P 282 (356)
++|++++|+||||.+.+ +|++ +++ +.++++++|++|.... .. .... ....+.+..|++|.++ ..
T Consensus 159 k~v~l~~p~NPtG~~~~--~l~~--~~~----~~~~~ii~De~y~~~~---~~---~l~~-~~~~~i~~~S~SK~~g~~G 223 (391)
T 3bwn_A 159 YIELVTSPNNPDGTIRE--TVVN--RPD----DDEAKVIHDFAYYWPH---YT---PITR-RQDHDIMLFTFSKITGHAG 223 (391)
T ss_dssp EEEEEESSCTTTCCCCC--CCC-----------CCCEEEEECTTCSTT---TS---CCCC-CBCCSEEEEEHHHHHSCGG
T ss_pred EEEEECCCCCCCchhHH--HHHH--Hhh----cCCCEEEEeCCCCCCC---CC---cccc-CCCCeEEEEechhhcCCCc
Confidence 89999999999999975 4433 225 0049999999997311 11 1111 2345677888999863 23
Q ss_pred cCeeEEEEeC
Q 018437 283 AGVGWVVWRT 292 (356)
Q Consensus 283 ~g~g~l~~~~ 292 (356)
..+|++++.+
T Consensus 224 lRiG~~~~~~ 233 (391)
T 3bwn_A 224 SRIGWALVKD 233 (391)
T ss_dssp GCEEEEEECC
T ss_pred cceEEEEecC
Confidence 4569998744
No 229
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.40 E-value=8.3e-12 Score=120.25 Aligned_cols=186 Identities=13% Similarity=-0.032 Sum_probs=118.7
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHh
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~ 147 (356)
.+|.+.+++.+.+.... .+ .....++.++.++++++++ +. ..+++|+||++|+..++.+++...
T Consensus 69 ~~p~v~~a~~~~~~~~~-~~---~~~~~~~~~l~~~l~~~~~-~~-----~~v~~~~~g~ea~~~al~~ar~~~------ 132 (424)
T 2e7u_A 69 AHPKVLARVRETLERGL-TF---GAPSPLEVALAKKVKRAYP-FV-----DLVRFVNSGTEATMSALRLARGYT------ 132 (424)
T ss_dssp TCHHHHHHHHHHHHTCS-CC---SSCCHHHHHHHHHHHHHCT-TC-----CEEEEESSHHHHHHHHHHHHHHHH------
T ss_pred CCHHHHHHHHHHHHhCC-CC---CCCCHHHHHHHHHHHHhCC-CC-----CEEEEeCCHHHHHHHHHHHHHHhh------
Confidence 45788898888776421 11 1233456677888898885 32 248899999999999998765321
Q ss_pred cCCCCCCCeEEecCCCcchHHHHH-Hh-------------hCC------eeEEEEecCCccccCHHHHHHHHhh---Cce
Q 018437 148 QGKPYDKPNIVTGANVQVCWEKFA-RY-------------FEV------ELKEVKLEEGYYVMNPVKAVELVDE---NTI 204 (356)
Q Consensus 148 ~g~~~~~~~vi~s~~~h~s~~~~~-~~-------------~G~------~v~~v~~~~~~~~~d~~~L~~~i~~---~~~ 204 (356)
.++.||+.+++|+.+...+ .. .|+ .+..+|. .|+++|++++++ +++
T Consensus 133 -----~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~------~d~~~le~~l~~~~~~~~ 201 (424)
T 2e7u_A 133 -----GRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY------NDPEGLREVLKRRGEEIA 201 (424)
T ss_dssp -----CCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT------TCHHHHHHHHHHHGGGEE
T ss_pred -----CCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC------CCHHHHHHHHHhCCCCEE
Confidence 1356777777665433221 11 122 2333332 389999999973 455
Q ss_pred EEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCC
Q 018437 205 CVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL 280 (356)
Q Consensus 205 ~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~ 280 (356)
+|+++..++++|.+.| +++|.++ ++| |+++++|++|+++ . .......+..-...|.+ +..|+++
T Consensus 202 ~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~------g~~lI~DEv~~g~-~--~g~~~~~~~~~~~~di~--s~sK~l~ 269 (424)
T 2e7u_A 202 AIIFEPVVGNAGVLVPTEDFLKALHEA-KAY------GVLLIADEVMTGF-R--LAFGGATELLGLKPDLV--TLGKILG 269 (424)
T ss_dssp EEEECSSBCTTSCBCCCHHHHHHHHHG-GGG------TCEEEEECTTTTT-T--SSTTHHHHHHTCCCSEE--EECGGGG
T ss_pred EEEEeCCCCCCCCcCCCHHHHHHHHHH-HHc------CCEEEEecCcccc-c--cchhHHHHHhCCCcchh--hhhhhhh
Confidence 5555444444898877 9999999 999 9999999999865 2 11100111111135655 4569987
Q ss_pred CCcCeeEEEEeC
Q 018437 281 VYAGVGWVVWRT 292 (356)
Q Consensus 281 ~P~g~g~l~~~~ 292 (356)
++..+|+++.++
T Consensus 270 ~G~~~G~~~~~~ 281 (424)
T 2e7u_A 270 GGLPAAAYAGRR 281 (424)
T ss_dssp TTSSCEEEEECH
T ss_pred CCcceEEEEEcH
Confidence 767789998764
No 230
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.32 E-value=3e-11 Score=118.29 Aligned_cols=171 Identities=12% Similarity=-0.018 Sum_probs=108.5
Q ss_pred ChHHHHHHHHHHhcc----cCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHH
Q 018437 68 MEPECDKLVMASINK----NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~----~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~ 143 (356)
.+|.+.+++.+.+.. +...+.. ....++++++.+.++++++.+. ..+.+++||+|||..|+.+++..+..
T Consensus 80 ~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~~~~-----~~v~f~~sGseA~~~Aik~a~~~~~~ 153 (472)
T 1ohv_A 80 SHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAPKGM-----SQLITMACGSCSNENAFKTIFMWYRS 153 (472)
T ss_dssp TCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCCTTC-----CEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCCCCc-----CEEEEeCCchhHHHHHHHHHHHHhhh
Confidence 367888888766532 1111111 2235667777666777664332 24899999999999999998765321
Q ss_pred H-HH-------------hcCCCCC-CCeEEecCCCcch-HHHHHHhhCC--------e---eEEEEecCCcc--------
Q 018437 144 K-RK-------------EQGKPYD-KPNIVTGANVQVC-WEKFARYFEV--------E---LKEVKLEEGYY-------- 188 (356)
Q Consensus 144 ~-~~-------------~~g~~~~-~~~vi~s~~~h~s-~~~~~~~~G~--------~---v~~v~~~~~~~-------- 188 (356)
+ +. ..+.+.. +++||+.+..|+. ...++...|. . +..+++....+
T Consensus 154 ~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 233 (472)
T 1ohv_A 154 KERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKE 233 (472)
T ss_dssp HHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHH
T ss_pred hccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCcccCCCcccCcccccccc
Confidence 1 10 0000111 3678777765544 3333333332 1 12233321001
Q ss_pred -----ccCHHHHHHHHhh------CceEEEEecCCCcccccCC----HHHHHHHHHHhhhccCCCCcEEEecccccc
Q 018437 189 -----VMNPVKAVELVDE------NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGF 250 (356)
Q Consensus 189 -----~~d~~~L~~~i~~------~~~~v~~~~~~~~tG~~~~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~ 250 (356)
..|+++|+++|++ ++++|++...++++|.+.| +++|.++|++| |+++|+|++|.++
T Consensus 234 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~------g~lli~DEv~~g~ 304 (472)
T 1ohv_A 234 NQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKH------GCAFLVDEVQTGG 304 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHT------TCEEEEECTTTTT
T ss_pred chhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHh------CCEEEEeCcccCC
Confidence 2378999999986 7888888887888998877 99999999999 9999999999863
No 231
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.31 E-value=3e-12 Score=123.85 Aligned_cols=192 Identities=13% Similarity=0.096 Sum_probs=132.5
Q ss_pred ccccccCCCCh-HHHHHHHHHHhc-ccCC--CcccCc-c---hHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHH
Q 018437 59 NLASFVTTWME-PECDKLVMASIN-KNYV--DMDEYP-V---TTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAI 130 (356)
Q Consensus 59 ~l~~~~~~~~~-~~v~~~i~~~~~-~~~~--~~~~~~-~---~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~ 130 (356)
+|..+.+..++ +.+.+++.+++. .+.. .|.... + ..++++++.+++.+..+...+ ...+++|+|+++++
T Consensus 60 ~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~---~~~iv~t~G~~~al 136 (427)
T 2hox_A 60 DVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAK---DRYIVFGVGVTQLI 136 (427)
T ss_dssp ECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCT---TCEEEEESHHHHHH
T ss_pred EecCcCCCCCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCC---CCEEEEeCCHHHHH
Confidence 44444443333 466777777663 2221 244444 5 688888888888876553321 13589999999999
Q ss_pred HHHHHHH--------HHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhC
Q 018437 131 MLAGLAF--------KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN 202 (356)
Q Consensus 131 ~~al~~~--------~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~ 202 (356)
.+++.++ .++ +++|+++.++|..+...++..|++++. +.+|+++|+++++++
T Consensus 137 ~~~~~~l~~~~~~~~~~~-------------Gd~Vlv~~P~y~~~~~~~~~~g~~~~~-------~~~d~~~l~~~~~~~ 196 (427)
T 2hox_A 137 HGLVISLSPNMTATPDAP-------------ESKVVAHAPFYPVFREQTKYFDKKGYV-------WAGNAANYVNVSNPE 196 (427)
T ss_dssp HHHHHHHSCCTTTCTTSC-------------CEEEEECSSCCHHHHHHHHHSCBTTEE-------EEEEGGGGTTCSCGG
T ss_pred HHHHHHHhhccccccCCC-------------CCEEEEeCCCcccHHHHHHHcCCeeee-------ecCCHHHHHHhhcCC
Confidence 9998887 332 579999999999999999999998763 456778888888888
Q ss_pred ceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCC
Q 018437 203 TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY 282 (356)
Q Consensus 203 ~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P 282 (356)
+++|++++|+||||.+.+ + ++ . ++..++|.++.. ++.. ...+. ...+.+..|++|.++.|
T Consensus 197 ~k~v~l~~p~NPtG~~~~-~----~l--~------~~~~i~d~~~~~---~~~s---~~~~~-~~~~i~~~S~SK~~g~~ 256 (427)
T 2hox_A 197 QYIEMVTSPNNPEGLLRH-A----VI--K------GCKSIYDMVYYW---PHYT---PIKYK-ADEDILLFTMSKFTGHS 256 (427)
T ss_dssp GEEEEEESSCTTTCCCCC-C----SS--T------TCEEEEECTTCS---TTTS---CCCSC-BCCSEEEEEHHHHTSCG
T ss_pred ceEEEEcCCCCCcccccH-H----HH--c------CCCEEEeecccC---CCCC---ccccC-CCceEEEEeChhcCCCC
Confidence 899999999999999988 4 23 2 456788877632 1111 01111 35688899999987422
Q ss_pred -cCeeEEEEeCC
Q 018437 283 -AGVGWVVWRTK 293 (356)
Q Consensus 283 -~g~g~l~~~~~ 293 (356)
..+|+++.+++
T Consensus 257 G~RiG~~~~~~~ 268 (427)
T 2hox_A 257 GSRFGWALIKDE 268 (427)
T ss_dssp GGCCEEEEECCH
T ss_pred CceEEEEEECCH
Confidence 34899988543
No 232
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=98.77 E-value=3.3e-12 Score=124.57 Aligned_cols=187 Identities=12% Similarity=-0.071 Sum_probs=117.3
Q ss_pred ChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhC-CCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFN-TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 68 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g-~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
.+|.+.+++.+.+....... .....+.++.+.++++++ .+ ...++++|++|+..++.+++...
T Consensus 117 ~~p~V~~Av~~q~~~~~~~~----~~~~~~~~Lae~L~~~~p~~~-------~v~~~nSGseA~~~Aik~ar~~t----- 180 (465)
T 2yky_A 117 SHPVIRAAVERALAVGLNLS----TQTENEALFAEAVCDRFPSID-------LVRFTNSGTEANLMALATATAIT----- 180 (465)
Confidence 35778888877665421111 123345566677888874 33 27899999999999999876421
Q ss_pred hcCCCCCCCeEEecCCCcchHHH-HH---HhhCCeeEEEEecCCccccCHHHHHHHHh---hCceEEEEecCCCcccccC
Q 018437 147 EQGKPYDKPNIVTGANVQVCWEK-FA---RYFEVELKEVKLEEGYYVMNPVKAVELVD---ENTICVAAILGSTLTGEFE 219 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~~h~s~~~-~~---~~~G~~v~~v~~~~~~~~~d~~~L~~~i~---~~~~~v~~~~~~~~tG~~~ 219 (356)
.+++||+.+..+..... ++ ...|+....++++ + -|+++|+++++ +++++|++....+++|.+.
T Consensus 181 ------gr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~---~-~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~ 250 (465)
T 2yky_A 181 ------GRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGV---Y-NDVEGTADLLKRHGHDCAAILVEPMLGAGGCVP 250 (465)
Confidence 13567777665543222 22 1123311222222 1 27889999997 5777887776566689776
Q ss_pred C----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 220 D----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 220 ~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
+ +++|.++|+++ |+++++|++|. +-. ......+..-...|.++ ..|+++++..+|+++.++
T Consensus 251 ~~~~~l~~l~~l~~~~------g~llI~DEv~~-~r~---g~~~a~~~~gv~pDi~t--~sK~lg~G~piG~v~~~~ 315 (465)
T 2yky_A 251 AERAFLDLLRAEASRC------GALLIFDEVMT-SRL---SGGGAQEMLGISADLTT--LGKYIGGGMSFGAFGGRR 315 (465)
Confidence 5 99999999999 99999999998 522 11001111101246554 569987767788887764
No 233
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.03 E-value=1.3e-08 Score=98.67 Aligned_cols=189 Identities=16% Similarity=0.045 Sum_probs=114.9
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.+.......... .++.++.+.+++++..- ..+.++++|||||..|++.++...
T Consensus 103 H~hp~v~~Av~~q~~~~~~~~~~~----~~~~~lae~l~~~~p~~------~~v~f~~SGsEA~e~AiklAr~~t----- 167 (454)
T 4ao9_A 103 HSAPEIRDAVIEAMQGGINLTGHN----LLEGRLARLICERFPQI------EQLRFTNSGTEANLMALTAALHFT----- 167 (454)
T ss_dssp SCCHHHHHHHHHHHHTCSCCCSEE----SSHHHHHHHHHHHSTTC------SEEEEESSHHHHHHHHHHHHHHHH-----
T ss_pred CCCHHHHHHHHHHHhcCCCccCCc----HHHHHHHHHHHHhCCCC------CEEEEeCchHHHHHHHHHHHHhcc-----
Confidence 345889999888776432221111 23445566677776421 237899999999999999998752
Q ss_pred hcCCCCCCCeEEecC-CCcchHHHHHHhh---CCeeEEEEecCCccccCHHHHHHHHhh---CceEEEEecCCCcccccC
Q 018437 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYF---EVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFE 219 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~-~~h~s~~~~~~~~---G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~~ 219 (356)
| +.+|+... ..|-......... +.....+.+..+ |++.+++.+++ ++.+|++--.....|.+.
T Consensus 168 --g----r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~n----d~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~ 237 (454)
T 4ao9_A 168 --G----RRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPYN----DAQTARAQIERHGPEIAVVLVEPMQGASGCIP 237 (454)
T ss_dssp --T----CCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECTT----CHHHHHHHHHHTGGGEEEEEECSEESTTTCEE
T ss_pred --c----CCeEEEEeCCcCCccccccccccCccCCCCcccCCCc----hHHHHHHHHhhcCCceEEEEeccccCCCCccC
Confidence 1 35565544 3443221111110 111222222222 78889988874 456777666566667776
Q ss_pred C----HHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCCcCeeEEEEeC
Q 018437 220 D----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (356)
Q Consensus 220 ~----i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P~g~g~l~~~~ 292 (356)
| +++|.++|++| |++||+|+++.|-.-.+.. ...+.+ ..|.+++ .|.+++....|.++.++
T Consensus 238 p~~~fL~~lr~lc~~~------g~lLI~DEV~tGR~G~~~a-~e~~gv---~PDi~t~--gK~lggG~Piga~~~~~ 302 (454)
T 4ao9_A 238 GQPDFLQALRESATQV------GALLVFDEVMTSRLAPHGL-ANKLGI---RSDLTTL--GKYIGGGMSFGAFGGRA 302 (454)
T ss_dssp CCHHHHHHHHHHHHHH------TCEEEEECTTGGGGSTTCH-HHHHTC---CCSEEEE--EGGGGTTSSCEEEEECH
T ss_pred CchhhHHHHHHHHhhc------CCEEEEECCCcCCCccccc-hhccCC---CCcEEEe--ccccCCCCcceeeeeHH
Confidence 6 89999999999 9999999999752211100 001111 3477764 47777767788888765
No 234
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=98.78 E-value=4.7e-07 Score=88.27 Aligned_cols=206 Identities=14% Similarity=-0.076 Sum_probs=117.8
Q ss_pred CChHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~ 146 (356)
+.+|.+.+++.+.++........+....+.+.++.+.|.++...+. ..+.++++||||+..|++.++..+..
T Consensus 83 h~~p~v~~Ai~~q~~~l~~~~~~~~~~~~~~~~lAe~L~~~~p~~~-----~~v~f~~sGsEA~e~AiKlAr~~~~~--- 154 (473)
T 4e3q_A 83 FDHKGLIDAAKAQYERFPGYHAFFGRMSDQTVMLSEKLVEVSPFDS-----GRVFYTNSGSEANDTMVKMLWFLHAA--- 154 (473)
T ss_dssp SCCHHHHHHHHHHHHHCCCCCCCTTEEEHHHHHHHHHHHHHSSCSS-----CEEEEESSHHHHHHHHHHHHHHHHHH---
T ss_pred CCCHHHHHHHHHHHHhcccccccccccCHHHHHHHHHHHhhCCCCc-----cEEEEeCchHHHHHHHHHHHHHHHHh---
Confidence 3458888888877664332211222223334467778888876543 24789999999999999999876543
Q ss_pred hcCCCCCCCeEEecCC-CcchHHHHHHhhC-----------CeeEEEEecC-----Ccccc-------CHHHHHHHHhh-
Q 018437 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFE-----------VELKEVKLEE-----GYYVM-------NPVKAVELVDE- 201 (356)
Q Consensus 147 ~~g~~~~~~~vi~s~~-~h~s~~~~~~~~G-----------~~v~~v~~~~-----~~~~~-------d~~~L~~~i~~- 201 (356)
+|.. .+.+||.-.. .|-...-++...| -.+..++... ..+.. ..+++++.+.+
T Consensus 155 -~g~~-~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 232 (473)
T 4e3q_A 155 -EGKP-QKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQRE 232 (473)
T ss_dssp -TTCT-TCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred -cCCC-CcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhh
Confidence 2222 1345655444 4443333333222 1244444321 00111 12345555542
Q ss_pred ---CceEEEEecCCCcccccC----CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEc
Q 018437 202 ---NTICVAAILGSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVS 274 (356)
Q Consensus 202 ---~~~~v~~~~~~~~tG~~~----~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~ 274 (356)
++.+|++--....-|.+. -+++|.++|++| |++||+|+++.|+.. ...-...+..--..|.++++
T Consensus 233 ~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~------gilLI~DEV~tGfGR--tG~~fa~e~~gv~PDi~t~~ 304 (473)
T 4e3q_A 233 GADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKY------DIPVISDEVICGFGR--TGNTWGCVTYDFTPDAIISS 304 (473)
T ss_dssp CGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHT------TCCEEEECTTTSSST--TSSSCHHHHTTCCCSEEEEC
T ss_pred CCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhccc------ceEEeccCccccCCc--ccchhHHHhcCCCCChHHhc
Confidence 345666655555556653 389999999999 999999999987533 11100111111136777754
Q ss_pred CCcCCCCC-cCeeEEEEeC
Q 018437 275 GHKYGLVY-AGVGWVVWRT 292 (356)
Q Consensus 275 ~hK~l~~P-~g~g~l~~~~ 292 (356)
|.+.+. ...|.++.++
T Consensus 305 --K~l~gG~~Pl~av~~~~ 321 (473)
T 4e3q_A 305 --KNLTAGFFPMGAVILGP 321 (473)
T ss_dssp --GGGGTTSSCCEEEEECH
T ss_pred --ccccCCCCCcccccccH
Confidence 766555 6778888865
No 235
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=98.72 E-value=2.4e-06 Score=82.89 Aligned_cols=200 Identities=12% Similarity=-0.054 Sum_probs=115.0
Q ss_pred CChHHHHHHHHHHhcccCCC-cccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHH
Q 018437 67 WMEPECDKLVMASINKNYVD-MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (356)
Q Consensus 67 ~~~~~v~~~i~~~~~~~~~~-~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~ 145 (356)
+.+|.+.+++.+.+...... ....+ .+.+.++.+.+.+++..+. .....++++||||+..|++.++...
T Consensus 80 h~~p~v~~Ai~~q~~~~~~~~~~~~~--~~~~~~lae~L~~~~p~~~----~~~v~f~~sGsEA~e~AlklAr~~t---- 149 (456)
T 4atq_A 80 ASDPAVVAAVQEAAAHFTHTCFMVTP--YEGYVAVTEQLNRLTPGDH----AKRTVLFNSGAEAVENAVKVARLAT---- 149 (456)
T ss_dssp TTCHHHHHHHHHHHHHCSCCTTTTSC--CHHHHHHHHHHHHHSSCSS----CEEEEEESSHHHHHHHHHHHHHHHH----
T ss_pred CCCHHHHHHHHHHHhhccCcccCccC--cHHHHHHHHHHHHhCCCCC----CcEEEEeCChHHHHHHHHHHHhhhh----
Confidence 34588888887766542211 11111 1233356677888875432 1236789999999999999998652
Q ss_pred HhcCCCCCCCeEEecCCC-cchHHHHHHhhC-------------CeeEEEEecCC-----ccccCHHHHHHHHh------
Q 018437 146 KEQGKPYDKPNIVTGANV-QVCWEKFARYFE-------------VELKEVKLEEG-----YYVMNPVKAVELVD------ 200 (356)
Q Consensus 146 ~~~g~~~~~~~vi~s~~~-h~s~~~~~~~~G-------------~~v~~v~~~~~-----~~~~d~~~L~~~i~------ 200 (356)
| +.+|+.-..+ |-...-+....+ -.+..+|.... ...-+.+.+++.++
T Consensus 150 ---~----r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 222 (456)
T 4atq_A 150 ---G----RDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQI 222 (456)
T ss_dssp ---C----CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHT
T ss_pred ---c----CCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhh
Confidence 1 4566655444 433322222211 23566665310 01123344433332
Q ss_pred -h-CceEEEEecCCCcccccC----CHHHHHHHHHHhhhccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEc
Q 018437 201 -E-NTICVAAILGSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVS 274 (356)
Q Consensus 201 -~-~~~~v~~~~~~~~tG~~~----~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~ 274 (356)
. ++.+|++--.....|.+. -+++|.++|++| |++||+|+++.|+... ..-..++..--..|.++++
T Consensus 223 ~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~------gillI~DEV~tG~GRt--G~~~a~e~~gv~PDivt~g 294 (456)
T 4atq_A 223 GGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEK------GIVFIADEVQSGFCRT--GEWFAVDHEGVVPDIITMA 294 (456)
T ss_dssp CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHH------TCEEEEECTTTTTTTT--SSSSGGGGTTCCCSEEEEC
T ss_pred cCCceEEEEeccccCCCCccccchhhhHHHHHHHhhc------CCceEecccccccCCc--cccccccccCCCCchhhhh
Confidence 2 456666655555556653 389999999999 9999999999875331 1100111111136888865
Q ss_pred CCcCCCCCcCeeEEEEeCC
Q 018437 275 GHKYGLVYAGVGWVVWRTK 293 (356)
Q Consensus 275 ~hK~l~~P~g~g~l~~~~~ 293 (356)
|.+++....|.++.+++
T Consensus 295 --K~lggg~P~~av~~~~~ 311 (456)
T 4atq_A 295 --KGIAGGLPLSAITGRAD 311 (456)
T ss_dssp --GGGGTTSSCEEEEEEHH
T ss_pred --hcccCcCCceeeEecHH
Confidence 76666677888888753
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=98.34 E-value=2.3e-05 Score=81.56 Aligned_cols=205 Identities=10% Similarity=-0.084 Sum_probs=110.8
Q ss_pred hHHHHHHHHHHhcccCCCcccCcchHHHHHHHHHHHHHHhCCCCCCCCCCCeEEeCChhHHHHHHHHHHHHHHHHHHHhc
Q 018437 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (356)
Q Consensus 69 ~~~v~~~i~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~ 148 (356)
+|.+.+++.+.+..-.+.... ....+-..++.+.++++++-+. ...+.++++|++||..|+..+++.+... .
T Consensus 399 ~p~i~~Ai~~Q~~~l~h~~~~-~~~~~~~~~Lae~L~~~~p~~~----l~~vff~~SGSeA~E~AlK~A~r~~~~~---~ 470 (831)
T 4a0g_A 399 QAELAREMGYTAARFGHVMFP-ENVYEPALKCAELLLDGVGKGW----ASRVYFSDNGSTAIEIALKMAFRKFCVD---H 470 (831)
T ss_dssp HHHHHHHHHHHHHHHSSCCCT-TEECHHHHHHHHHHHHTTTTTT----CCEEEEESSHHHHHHHHHHHHHHHHHHT---T
T ss_pred CHHHHHHHHHHHhhccccccc-ccCCHHHHHHHHHHHHhCCCCC----CCEEEECCChhHHHHHHHHHHHHHHHhh---c
Confidence 577888887665542221111 1112223356677888876331 1237999999999999999985432211 1
Q ss_pred CCCC-------CCCeEEec-CCCcchHHHHHHhhCCe----------------------------eEEEEecCCccc---
Q 018437 149 GKPY-------DKPNIVTG-ANVQVCWEKFARYFEVE----------------------------LKEVKLEEGYYV--- 189 (356)
Q Consensus 149 g~~~-------~~~~vi~s-~~~h~s~~~~~~~~G~~----------------------------v~~v~~~~~~~~--- 189 (356)
|... .+.+||.- ...|-...-++...|.. +..+++... ++
T Consensus 471 g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~-~~~~~ 549 (831)
T 4a0g_A 471 NFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPES-FSEIA 549 (831)
T ss_dssp TC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTT-SCCCC
T ss_pred CCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCceEecCCcc-ccccc
Confidence 2110 13456654 44555555444443311 112332210 00
Q ss_pred ------cC------------------HHHHHHHHhh--------CceEEEEecC-CCcccccCC----HHHHHHHHHHhh
Q 018437 190 ------MN------------------PVKAVELVDE--------NTICVAAILG-STLTGEFED----VKLLHDLLTKKN 232 (356)
Q Consensus 190 ------~d------------------~~~L~~~i~~--------~~~~v~~~~~-~~~tG~~~~----i~~I~~i~~~~~ 232 (356)
-| .++|++.|++ ++.+|++--. ....|.+.+ +++|.++|++|
T Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~- 628 (831)
T 4a0g_A 550 PEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNR- 628 (831)
T ss_dssp SSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHT-
T ss_pred cccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHc-
Confidence 01 2567777752 2344544432 456566643 89999999999
Q ss_pred hccCCCCcEEEecccccccccccCCCCcccccCCCceEEEEcCCcCCCCC-cCeeEEEEeC
Q 018437 233 EETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVGWVVWRT 292 (356)
Q Consensus 233 ~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~Ds~~~~~hK~l~~P-~g~g~l~~~~ 292 (356)
|+++|+|+++.|+.. ..........--..|.++ .-|.+.+. ...|+++.++
T Consensus 629 -----gilLI~DEV~tGfGR--tG~~fa~e~~gv~PDiit--lsK~L~gG~~Plgav~~~~ 680 (831)
T 4a0g_A 629 -----KIPVIFDEVFTGFWR--LGVETTTELLGCKPDIAC--FAKLLTGGMVPLAVTLATD 680 (831)
T ss_dssp -----TCCEEEECTTTTTTT--TSBSSTHHHHSSCCSEEE--ECGGGGTTSSCCEEEEECH
T ss_pred -----CCeEEEEcCcccccc--CCCchhhHhcCCCCcEEE--EecccccCccCcEEEEECH
Confidence 999999999887533 111001111011357776 45877654 3668888765
No 237
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=54.21 E-value=23 Score=32.26 Aligned_cols=53 Identities=15% Similarity=0.021 Sum_probs=39.5
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (356)
++.+++|..+.-+|+.+.+.- -+-.|++|...-..-...++.+|++|+.++..
T Consensus 90 Vv~aSsGN~g~alA~~aa~~G------------~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~~ 142 (344)
T 3vc3_A 90 LIEPTSGNMGISMAFMAAMKG------------YKMVLTMPSYTSLERRVTMRAFGAELILTDPA 142 (344)
T ss_dssp EEEECSSHHHHHHHHHHHHHT------------CEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred EEEeCCcHHHHHHHHHHHHcC------------CcEEEEECCCChHHHHHHHHHcCCEEEEECCC
Confidence 567778888888887765431 12478888887777778888999999888754
No 238
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=50.11 E-value=73 Score=27.81 Aligned_cols=84 Identities=8% Similarity=-0.037 Sum_probs=50.6
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHH
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i 199 (356)
.++.+||+.++=.++.-.... . +-+|++..-.-....+.++.+|.++..+.+|-. |.+++++.+
T Consensus 31 valVTGas~GIG~aiA~~la~-------~-----Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~----~~~~v~~~~ 94 (273)
T 4fgs_A 31 IAVITGATSGIGLAAAKRFVA-------E-----GARVFITGRRKDVLDAAIAEIGGGAVGIQADSA----NLAELDRLY 94 (273)
T ss_dssp EEEEESCSSHHHHHHHHHHHH-------T-----TCEEEEEESCHHHHHHHHHHHCTTCEEEECCTT----CHHHHHHHH
T ss_pred EEEEeCcCCHHHHHHHHHHHH-------C-----CCEEEEEECCHHHHHHHHHHcCCCeEEEEecCC----CHHHHHHHH
Confidence 455567776665544322221 1 356776655555667777777888888887642 555555554
Q ss_pred hh------CceEEEEecCCCcccccC
Q 018437 200 DE------NTICVAAILGSTLTGEFE 219 (356)
Q Consensus 200 ~~------~~~~v~~~~~~~~tG~~~ 219 (356)
++ +..+++-+++....+.+.
T Consensus 95 ~~~~~~~G~iDiLVNNAG~~~~~~~~ 120 (273)
T 4fgs_A 95 EKVKAEAGRIDVLFVNAGGGSMLPLG 120 (273)
T ss_dssp HHHHHHHSCEEEEEECCCCCCCCCTT
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChh
Confidence 42 455677777777766663
No 239
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=45.88 E-value=1.3e+02 Score=24.96 Aligned_cols=104 Identities=14% Similarity=-0.015 Sum_probs=64.6
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhh-CCeeEEEEe-----cCCccccCHH
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYF-EVELKEVKL-----EEGYYVMNPV 193 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~-G~~v~~v~~-----~~~~~~~d~~ 193 (356)
.+|-.-|.+-...++..+.++..+. | -..|++.+.+-..-.++++.+ |++++.|.- .++.+.|+++
T Consensus 18 ~YF~~~G~eNT~~tl~la~era~e~----~----Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~~~e 89 (201)
T 1vp8_A 18 VYFNKPGRENTEETLRLAVERAKEL----G----IKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTMPPE 89 (201)
T ss_dssp EEESSCSGGGHHHHHHHHHHHHHHH----T----CCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCHH
T ss_pred EEecCCCcccHHHHHHHHHHHHHHc----C----CCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcCCHH
Confidence 4566666665555666665543321 1 236666666666666666655 666666653 1234788877
Q ss_pred HHHHHHhhCceEEEEecCC--------CcccccCCHHHHHHHHH-Hh
Q 018437 194 KAVELVDENTICVAAILGS--------TLTGEFEDVKLLHDLLT-KK 231 (356)
Q Consensus 194 ~L~~~i~~~~~~v~~~~~~--------~~tG~~~~i~~I~~i~~-~~ 231 (356)
..++.-....+++..++.- +-.|.+.|.+-|++..| -.
T Consensus 90 ~~~~L~~~G~~V~t~tH~lsgveR~is~kfGG~~p~eiiA~tLR~~f 136 (201)
T 1vp8_A 90 VEEELRKRGAKIVRQSHILSGLERSISRKLGGVSRTEAIAEALRSLF 136 (201)
T ss_dssp HHHHHHHTTCEEEECCCTTTTTHHHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEEEeccccchhHHHHHhcCCCCHHHHHHHHHHHHh
Confidence 7666666667777766663 33456789999999988 44
No 240
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=43.88 E-value=1.5e+02 Score=25.18 Aligned_cols=77 Identities=12% Similarity=0.050 Sum_probs=51.9
Q ss_pred CeEEecCCC-cc-hHHHHHHhhCCeeEEEEecC-------CccccCHHHHHHHHhh-CceEEEEecCCCcccccCCHHHH
Q 018437 155 PNIVTGANV-QV-CWEKFARYFEVELKEVKLEE-------GYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLL 224 (356)
Q Consensus 155 ~~vi~s~~~-h~-s~~~~~~~~G~~v~~v~~~~-------~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~i~~I 224 (356)
..|+++..+ +. .+....+..+..+..+|+.. ..+.|++++..++++. +++.++.+|-.+..-.-.+.+++
T Consensus 161 ~~i~~~GDt~~~~~~~~~~~~~~~Dv~il~~g~~~~~~~~~~~hm~~~ea~~~~~~l~~~~vi~~H~~~~~~~~~~~~~l 240 (264)
T 3rpc_A 161 PTVYLVGDTVWTSDVEKALLRFDPNVIIMNTGYAQILGFEDSIIMGTKDIGRMVVRKPEAKIIAVHMDTVNHTATSRKDV 240 (264)
T ss_dssp CCEEECCSCCSCHHHHHHHHHHCCSEEEEECSCBCBTTCSSCSSCCHHHHHHHHHHCTTSEEEEESCSSSTTBCSCHHHH
T ss_pred cEEEEECCcCchHHHHHHHHHhCCCEEEEecCccccccccCCcccCHHHHHHHHHhCCcCeEEEEccccccccccCHHHH
Confidence 356655444 33 24455566688888899862 2478998877776654 56778888877644344678899
Q ss_pred HHHHHHh
Q 018437 225 HDLLTKK 231 (356)
Q Consensus 225 ~~i~~~~ 231 (356)
.+.+++.
T Consensus 241 ~~~~~~~ 247 (264)
T 3rpc_A 241 RKFIKGN 247 (264)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 9988887
No 241
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=43.88 E-value=98 Score=26.29 Aligned_cols=76 Identities=8% Similarity=-0.004 Sum_probs=40.5
Q ss_pred eEEecCCCcch-------HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHH
Q 018437 156 NIVTGANVQVC-------WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLL 228 (356)
Q Consensus 156 ~vi~s~~~h~s-------~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~ 228 (356)
-++++...++. +...++..|..+.....+.+ ..-..+.++..+..+...|++..... +.+.++.+.+
T Consensus 12 g~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-~~~~~~~~~~l~~~~vdgiI~~~~~~-----~~~~~~~~~~ 85 (293)
T 3l6u_A 12 GFTIVNDKHEFAQRLINAFKAEAKANKYEALVATSQNS-RISEREQILEFVHLKVDAIFITTLDD-----VYIGSAIEEA 85 (293)
T ss_dssp EEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEECSSC-HHHHHHHHHHHHHTTCSEEEEECSCT-----TTTHHHHHHH
T ss_pred EEEEecCCcHHHHHHHHHHHHHHHHcCCEEEEECCCCC-HHHHHHHHHHHHHcCCCEEEEecCCh-----HHHHHHHHHH
Confidence 35566555433 34455566888777765432 22223455566666777776543322 2344555566
Q ss_pred HHhhhccCCCCcEEE
Q 018437 229 TKKNEETGWDTPIHV 243 (356)
Q Consensus 229 ~~~~~~~~~~~~l~v 243 (356)
++. ++++++
T Consensus 86 ~~~------~iPvV~ 94 (293)
T 3l6u_A 86 KKA------GIPVFA 94 (293)
T ss_dssp HHT------TCCEEE
T ss_pred HHc------CCCEEE
Confidence 666 665443
No 242
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=41.15 E-value=1.3e+02 Score=26.84 Aligned_cols=53 Identities=17% Similarity=0.091 Sum_probs=35.1
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (356)
++..++|..+..+|..+.+. | -+-.|++|...-..-...++.+|++|+.++.+
T Consensus 76 vv~aSsGN~g~alA~aa~~~---------G---~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 128 (325)
T 3dwg_A 76 ILEPTSGNTGISLAMAARLK---------G---YRLICVMPENTSVERRQLLELYGAQIIFSAAE 128 (325)
T ss_dssp EEEECSSHHHHHHHHHHHHH---------T---CEEEEEEESSSCHHHHHHHHHHTCEEEEECST
T ss_pred EEEeCCcHHHHHHHHHHHHc---------C---CcEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 45556677776666555432 1 12367888776556677788899999988854
No 243
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=40.02 E-value=15 Score=30.62 Aligned_cols=49 Identities=12% Similarity=0.206 Sum_probs=37.1
Q ss_pred CHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccc
Q 018437 191 NPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (356)
Q Consensus 191 d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~ 248 (356)
|.+.|+++++.+...+++.. |.+..++++.+.+|++.+ -+++|+|-..|
T Consensus 18 ~~~~l~~al~s~~~~ifll~-----g~i~~l~~~v~~lk~~~K----~v~Vh~Dli~G 66 (192)
T 3kts_A 18 NQKDMEKILELDLTYMVMLE-----THVAQLKALVKYAQAGGK----KVLLHADLVNG 66 (192)
T ss_dssp SSHHHHHHTTSSCCEEEECS-----EETTTHHHHHHHHHHTTC----EEEEEGGGEET
T ss_pred CHHHHHHHHcCCCCEEEEec-----CcHHHHHHHHHHHHHcCC----eEEEecCchhc
Confidence 56789999987666666543 556789999999999943 46788887765
No 244
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=37.88 E-value=1.7e+02 Score=26.56 Aligned_cols=51 Identities=16% Similarity=-0.018 Sum_probs=31.9
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEE
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVK 182 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~ 182 (356)
++..++|..+...|..+.+. | -+-.|++|...-......++.+|++|+.++
T Consensus 96 vv~aSsGN~g~alA~aa~~~---------G---~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~ 146 (364)
T 4h27_A 96 FVCSSSGNAGMAAAYAARQL---------G---VPATIVVPGTTPALTIERLKNEGATVKVVG 146 (364)
T ss_dssp EEECCSSHHHHHHHHHHHHH---------T---CCEEEEEETTSCHHHHHHHHTTTCEEEEEC
T ss_pred EEEeCCChHHHHHHHHHHHh---------C---CceEEEECCCCCHHHHHHHHHcCCEEEEEC
Confidence 44555666665555544322 1 124778887765556667777899998886
No 245
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=36.05 E-value=1.1e+02 Score=27.17 Aligned_cols=51 Identities=20% Similarity=0.015 Sum_probs=31.4
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEE
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVK 182 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~ 182 (356)
++..++|..+..+|..+.+. | -+-.|++|...-......++.+|++|+.++
T Consensus 57 vv~~ssGN~g~alA~~a~~~---------G---~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~ 107 (318)
T 2rkb_A 57 LVCSSGGNAGIAAAYAARKL---------G---IPATIVLPESTSLQVVQRLQGEGAEVQLTG 107 (318)
T ss_dssp EEECCCSHHHHHHHHHHHHH---------T---CCEEEEECTTCCHHHHHHHHHTTCEEEECC
T ss_pred EEEECCchHHHHHHHHHHHc---------C---CCEEEEECCCCcHHHHHHHHhcCCEEEEEC
Confidence 44455666666655544322 1 124778887655556667788899988765
No 246
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=35.93 E-value=1.2e+02 Score=26.09 Aligned_cols=58 Identities=5% Similarity=-0.084 Sum_probs=26.6
Q ss_pred HHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHh
Q 018437 168 EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (356)
Q Consensus 168 ~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~ 231 (356)
...++..|..+.....+.+ ..-..+.++..+..+...|++...... .+.+..+.+++.
T Consensus 25 ~~~a~~~g~~~~~~~~~~~-~~~~~~~i~~l~~~~vdgiIi~~~~~~-----~~~~~~~~~~~~ 82 (313)
T 3m9w_A 25 VKKAESLGAKVFVQSANGN-EETQMSQIENMINRGVDVLVIIPYNGQ-----VLSNVVKEAKQE 82 (313)
T ss_dssp HHHHHHTSCEEEEEECTTC-HHHHHHHHHHHHHTTCSEEEEECSSTT-----SCHHHHHHHHTT
T ss_pred HHHHHHcCCEEEEECCCCC-HHHHHHHHHHHHHcCCCEEEEeCCChh-----hhHHHHHHHHHC
Confidence 3444455666665554321 111223445555555555554433221 233444555555
No 247
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=35.47 E-value=1.3e+02 Score=26.10 Aligned_cols=64 Identities=3% Similarity=-0.119 Sum_probs=35.3
Q ss_pred HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEE
Q 018437 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIH 242 (356)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~ 242 (356)
+...++..|..+.....+.+ ..-..+.++..+..++..|++..... +......+.+++. +++++
T Consensus 25 i~~~a~~~g~~~~~~~~~~~-~~~~~~~i~~~~~~~vdgiIi~~~~~-----~~~~~~~~~~~~~------giPvV 88 (330)
T 3uug_A 25 IVKQLQEAGYKTDLQYADDD-IPNQLSQIENMVTKGVKVLVIASIDG-----TTLSDVLKQAGEQ------GIKVI 88 (330)
T ss_dssp HHHHHHHTTCEEEEEECTTC-HHHHHHHHHHHHHHTCSEEEECCSSG-----GGGHHHHHHHHHT------TCEEE
T ss_pred HHHHHHHcCCEEEEeeCCCC-HHHHHHHHHHHHHcCCCEEEEEcCCc-----hhHHHHHHHHHHC------CCCEE
Confidence 34555566887776664322 22223456666667777776543322 1344555666677 77554
No 248
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=34.53 E-value=93 Score=29.20 Aligned_cols=53 Identities=21% Similarity=0.137 Sum_probs=35.6
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (356)
++..++|..+...|..+.+. | -+-.|++|+..-......++.+|++|+.++.+
T Consensus 178 VV~aSsGNhG~AlA~aAa~~---------G---l~~~IvmP~~~s~~k~~~~r~~GAeVv~v~~~ 230 (430)
T 4aec_A 178 LVEPTSGNTGIGLAFIAASR---------G---YRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (430)
T ss_dssp EEEECSSHHHHHHHHHHHHH---------T---CEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred EEEECCCHHHHHHHHHHHHh---------C---CEEEEEEcCCCCHHHHHHHHHCCCEEEEECCC
Confidence 45566677777666665433 1 12367888776666677788899999988753
No 249
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=34.39 E-value=2.1e+02 Score=24.21 Aligned_cols=83 Identities=12% Similarity=-0.018 Sum_probs=45.3
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHH
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i 199 (356)
.++.+||+.++=.++.-.... . +..|++...........++.+|.++..+.+|-. |.+.+++.+
T Consensus 29 ~vlVTGas~gIG~aia~~la~-------~-----G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~----d~~~v~~~~ 92 (266)
T 3grp_A 29 KALVTGATGGIGEAIARCFHA-------Q-----GAIVGLHGTREDKLKEIAADLGKDVFVFSANLS----DRKSIKQLA 92 (266)
T ss_dssp EEEESSTTSHHHHHHHHHHHH-------T-----TCEEEEEESCHHHHHHHHHHHCSSEEEEECCTT----SHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHH-------C-----CCEEEEEeCCHHHHHHHHHHhCCceEEEEeecC----CHHHHHHHH
Confidence 466677776654444322211 1 346666554444455666667888888887642 556665555
Q ss_pred hh------CceEEEEecCCCccccc
Q 018437 200 DE------NTICVAAILGSTLTGEF 218 (356)
Q Consensus 200 ~~------~~~~v~~~~~~~~tG~~ 218 (356)
+. +..+++-+++....+.+
T Consensus 93 ~~~~~~~g~iD~lvnnAg~~~~~~~ 117 (266)
T 3grp_A 93 EVAEREMEGIDILVNNAGITRDGLF 117 (266)
T ss_dssp HHHHHHHTSCCEEEECCCCC-----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCc
Confidence 42 45677777776655543
No 250
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=34.28 E-value=43 Score=25.43 Aligned_cols=43 Identities=9% Similarity=-0.040 Sum_probs=30.1
Q ss_pred HHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccc
Q 018437 192 PVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (356)
Q Consensus 192 ~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~ 248 (356)
++.++++.+..++.|+++.+. .+ +++.++|+++ |+-++ ..+.+
T Consensus 72 ~~~v~e~~~~g~k~v~~~~G~-----~~--~e~~~~a~~~------Girvv-~nC~g 114 (122)
T 3ff4_A 72 LSEYNYILSLKPKRVIFNPGT-----EN--EELEEILSEN------GIEPV-IGCTL 114 (122)
T ss_dssp GGGHHHHHHHCCSEEEECTTC-----CC--HHHHHHHHHT------TCEEE-ESCHH
T ss_pred HHHHHHHHhcCCCEEEECCCC-----Ch--HHHHHHHHHc------CCeEE-CCcCe
Confidence 345666666677778776553 22 7899999999 98877 45554
No 251
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=33.66 E-value=93 Score=27.90 Aligned_cols=52 Identities=21% Similarity=0.183 Sum_probs=34.8
Q ss_pred EEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec
Q 018437 121 VGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (356)
Q Consensus 121 ~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (356)
+..++|..+..+|..+.+. | -+-.|++|...-..-...++.+|++|+.++.+
T Consensus 76 v~aSsGN~g~alA~aa~~~---------G---~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 127 (334)
T 3tbh_A 76 VESSSGNTGVSLAHLGAIR---------G---YKVIITMPESMSLERRCLLRIFGAEVILTPAA 127 (334)
T ss_dssp EEECSSHHHHHHHHHHHHH---------T---CEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred EEeCCCHHHHHHHHHHHHh---------C---CCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 5556677776666555433 1 12367888776556667788899999988754
No 252
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=32.51 E-value=20 Score=33.78 Aligned_cols=33 Identities=18% Similarity=0.121 Sum_probs=29.3
Q ss_pred CCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccc
Q 018437 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (356)
Q Consensus 211 ~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~ 249 (356)
.++-.|+.++++++++-|+++ ||.+++|.++..
T Consensus 69 i~~~~Gt~~df~~lv~~aH~~------Gi~VilD~V~NH 101 (496)
T 4gqr_A 69 LCTRSGNEDEFRNMVTRCNNV------GVRIYVDAVINH 101 (496)
T ss_dssp SCBTTBCHHHHHHHHHHHHHT------TCEEEEEECCSE
T ss_pred eCCCCCCHHHHHHHHHHHHHC------CCEEEEEEccCc
Confidence 456789999999999999999 999999988654
No 253
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=32.03 E-value=1.4e+02 Score=25.34 Aligned_cols=71 Identities=8% Similarity=0.005 Sum_probs=44.9
Q ss_pred cchHHHHHHh---hCCe-eEEEEecCCccccCHHHHHHHH---hhCceEEEEecCCCccccc--CCHHHHHHHHHHhhhc
Q 018437 164 QVCWEKFARY---FEVE-LKEVKLEEGYYVMNPVKAVELV---DENTICVAAILGSTLTGEF--EDVKLLHDLLTKKNEE 234 (356)
Q Consensus 164 h~s~~~~~~~---~G~~-v~~v~~~~~~~~~d~~~L~~~i---~~~~~~v~~~~~~~~tG~~--~~i~~I~~i~~~~~~~ 234 (356)
-.++..++.+ +|+. +++.|.. |.-.+++++... .++-. .+ -|||.+ +++++|.++|.+.
T Consensus 144 ~V~vetAiaml~dmG~~SvKffPm~---Gl~~l~E~~avAka~a~~g~-~l-----EPTGGIdl~N~~~I~~i~l~a--- 211 (249)
T 3m0z_A 144 IVPLETAIALLKDMGGSSIKYFPMG---GLKHRAEFEAVAKACAAHDF-WL-----EPTGGIDLENYSEILKIALDA--- 211 (249)
T ss_dssp EEEHHHHHHHHHHTTCCEEEECCCT---TTTTHHHHHHHHHHHHHTTC-EE-----EEBSSCCTTTHHHHHHHHHHH---
T ss_pred eeeHHHHHHHHHHcCCCeeeEeecC---CcccHHHHHHHHHHHHHcCc-eE-----CCCCCccHhhHHHHHHHHHHc---
Confidence 3446666554 3555 7778875 333455555433 33333 22 588987 6899999999999
Q ss_pred cCCCCcEEEeccccc
Q 018437 235 TGWDTPIHVDAASGG 249 (356)
Q Consensus 235 ~~~~~~l~vD~a~~~ 249 (356)
|+..+.-=.|+.
T Consensus 212 ---Gv~~viPHIYss 223 (249)
T 3m0z_A 212 ---GVSKIIPHIYSS 223 (249)
T ss_dssp ---TCSCBCCBCCGG
T ss_pred ---CCCeecccccce
Confidence 876665555554
No 254
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=31.12 E-value=1.6e+02 Score=26.86 Aligned_cols=51 Identities=16% Similarity=-0.038 Sum_probs=32.6
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEE
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVK 182 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~ 182 (356)
++..++|..+...|..+.+. | -+-.|++|...-......++.+|++|+.++
T Consensus 96 vv~aSsGN~g~alA~aa~~~---------G---~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~ 146 (372)
T 1p5j_A 96 FVCSSAGNAGMAAAYAARQL---------G---VPATIVVPGTTPALTIERLKNEGATCKVVG 146 (372)
T ss_dssp EEECCSSHHHHHHHHHHHHH---------T---CCEEEEECTTCCHHHHHHHHHTTCEEEECC
T ss_pred EEEeCCCHHHHHHHHHHHHc---------C---CcEEEEECCCCCHHHHHHHHhcCCEEEEEC
Confidence 44445666676666554322 1 124788887765566677788899988765
No 255
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=30.91 E-value=1.1e+02 Score=24.26 Aligned_cols=83 Identities=13% Similarity=0.091 Sum_probs=49.9
Q ss_pred CCeEEe---cCCCcch----HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHh-hCceEEEEecCCCcccccCCHHHHH
Q 018437 154 KPNIVT---GANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD-ENTICVAAILGSTLTGEFEDVKLLH 225 (356)
Q Consensus 154 ~~~vi~---s~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~-~~~~~v~~~~~~~~tG~~~~i~~I~ 225 (356)
+++|++ ....|.- +....+..|.+|+.+.. .+.++++.+++. .++.+|.++.-.+ .....++++.
T Consensus 18 ~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~-----~~p~e~lv~aa~~~~~diV~lS~~~~--~~~~~~~~~i 90 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGL-----RQTPEQVAMAAVQEDVDVIGVSILNG--AHLHLMKRLM 90 (161)
T ss_dssp SCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCS-----BCCHHHHHHHHHHTTCSEEEEEESSS--CHHHHHHHHH
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCC-----CCCHHHHHHHHHhcCCCEEEEEeech--hhHHHHHHHH
Confidence 455554 3345643 34444556888876654 346777777665 4677777766554 3456677777
Q ss_pred HHHHHhhhccCCCCcEEEecc
Q 018437 226 DLLTKKNEETGWDTPIHVDAA 246 (356)
Q Consensus 226 ~i~~~~~~~~~~~~~l~vD~a 246 (356)
+.+++... .++.+++-|+
T Consensus 91 ~~L~~~g~---~~i~v~vGG~ 108 (161)
T 2yxb_A 91 AKLRELGA---DDIPVVLGGT 108 (161)
T ss_dssp HHHHHTTC---TTSCEEEEEC
T ss_pred HHHHhcCC---CCCEEEEeCC
Confidence 77777510 0467777554
No 256
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=30.72 E-value=1e+02 Score=27.10 Aligned_cols=53 Identities=15% Similarity=0.096 Sum_probs=34.6
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (356)
++..++|..+..+|..+.+. | -+-.|++|...-..-...++.+|++|+.++.+
T Consensus 70 vv~assGN~g~alA~~a~~~---------G---~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~ 122 (313)
T 2q3b_A 70 ILEPTSGNTGIALAMVCAAR---------G---YRCVLTMPETMSLERRMLLRAYGAELILTPGA 122 (313)
T ss_dssp EEEECSSHHHHHHHHHHHHH---------T---CEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred EEEeCCCHHHHHHHHHHHHc---------C---CcEEEEECCCCCHHHHHHHHHCCCEEEEeCCC
Confidence 45566677776666554422 1 12367888765555667778889999988864
No 257
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=29.40 E-value=1.5e+02 Score=24.97 Aligned_cols=38 Identities=3% Similarity=-0.067 Sum_probs=15.8
Q ss_pred HHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEe
Q 018437 171 ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAI 209 (356)
Q Consensus 171 ~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~ 209 (356)
++..|..+.....+.+ ..-..+.++..+..+...|++.
T Consensus 31 a~~~g~~~~~~~~~~~-~~~~~~~~~~l~~~~vdgiIi~ 68 (291)
T 3l49_A 31 IERLGGTAIALDAGRN-DQTQVSQIQTLIAQKPDAIIEQ 68 (291)
T ss_dssp HHHTTCEEEEEECTTC-HHHHHHHHHHHHHHCCSEEEEE
T ss_pred HHHcCCEEEEEcCCCC-HHHHHHHHHHHHHcCCCEEEEe
Confidence 3344555555543321 1111233444444455555433
No 258
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=28.41 E-value=1.7e+02 Score=23.96 Aligned_cols=71 Identities=17% Similarity=0.011 Sum_probs=44.9
Q ss_pred HHHHHHhhCCeeEEEEecCCccccCHHHHHHHHh-hCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEec
Q 018437 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD-ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (356)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~-~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~ 245 (356)
+....+..|.+|+.+.. .+.++++.+++. .++.+|.++.-.++ ....++++.+.+++.... .++.+++-|
T Consensus 108 va~~l~~~G~~v~~LG~-----~vp~~~l~~~~~~~~~d~v~lS~~~~~--~~~~~~~~i~~l~~~~~~--~~~~v~vGG 178 (210)
T 1y80_A 108 VAMMLESGGFTVYNLGV-----DIEPGKFVEAVKKYQPDIVGMSALLTT--TMMNMKSTIDALIAAGLR--DRVKVIVGG 178 (210)
T ss_dssp HHHHHHHTTCEEEECCS-----SBCHHHHHHHHHHHCCSEEEEECCSGG--GTHHHHHHHHHHHHTTCG--GGCEEEEES
T ss_pred HHHHHHHCCCEEEECCC-----CCCHHHHHHHHHHcCCCEEEEeccccc--cHHHHHHHHHHHHhcCCC--CCCeEEEEC
Confidence 34444566888877653 356778877775 47778877775443 455677777777775100 037787766
Q ss_pred c
Q 018437 246 A 246 (356)
Q Consensus 246 a 246 (356)
+
T Consensus 179 ~ 179 (210)
T 1y80_A 179 A 179 (210)
T ss_dssp T
T ss_pred C
Confidence 4
No 259
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=27.68 E-value=2.4e+02 Score=23.88 Aligned_cols=59 Identities=8% Similarity=-0.048 Sum_probs=28.2
Q ss_pred HHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHh
Q 018437 168 EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (356)
Q Consensus 168 ~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~ 231 (356)
...++..|..+..+.....+..--.+.++..+..+...|++...... ......+.+++.
T Consensus 27 ~~~a~~~g~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~-----~~~~~~~~~~~~ 85 (305)
T 3g1w_A 27 EDAAQALNVTVEYRGAAQYDIQEQITVLEQAIAKNPAGIAISAIDPV-----ELTDTINKAVDA 85 (305)
T ss_dssp HHHHHHHTCEEEEEECSSSCHHHHHHHHHHHHHHCCSEEEECCSSTT-----TTHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEeCCCcCCHHHHHHHHHHHHHhCCCEEEEcCCCHH-----HHHHHHHHHHHC
Confidence 34455567777653322111112224455556667777665433221 234445555566
No 260
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=25.81 E-value=69 Score=28.39 Aligned_cols=53 Identities=19% Similarity=0.121 Sum_probs=34.3
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (356)
++..++|..+..+|..+.+. | -+-.|++|...-..-...++.+|++|+.++.+
T Consensus 65 vv~~ssGN~g~a~A~~a~~~---------G---~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~ 117 (316)
T 1y7l_A 65 IVDATSGNTGIALAYVAAAR---------G---YKITLTMPETMSLERKRLLCGLGVNLVLTEGA 117 (316)
T ss_dssp EEESCCSHHHHHHHHHHHHH---------T---CCEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred EEEeCCcHHHHHHHHHHHHc---------C---CcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 44455677776666554432 1 13478888766556677778889999888754
No 261
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=25.73 E-value=29 Score=32.61 Aligned_cols=33 Identities=12% Similarity=-0.007 Sum_probs=28.6
Q ss_pred CCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccc
Q 018437 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (356)
Q Consensus 211 ~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~ 249 (356)
.+...|+.++++++++-|+++ |+-+++|.++..
T Consensus 57 idp~~Gt~~dfk~Lv~~aH~~------Gi~VilD~V~NH 89 (448)
T 1g94_A 57 LQSRGGNRAQFIDMVNRCSAA------GVDIYVDTLINH 89 (448)
T ss_dssp SCBTTBCHHHHHHHHHHHHHT------TCEEEEEEECSE
T ss_pred cCCCCCCHHHHHHHHHHHHHC------CCEEEEEEeecc
Confidence 455679999999999999999 999999988653
No 262
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=25.72 E-value=2.8e+02 Score=23.57 Aligned_cols=91 Identities=11% Similarity=-0.008 Sum_probs=50.9
Q ss_pred CeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-----ecC---------CCcchHHHHHHhhCCeeEEEEec
Q 018437 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIV-----TGA---------NVQVCWEKFARYFEVELKEVKLE 184 (356)
Q Consensus 119 ~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi-----~s~---------~~h~s~~~~~~~~G~~v~~v~~~ 184 (356)
.++..|||..+...+.++... | -+|+ ++. ..+......|+.+|++...+++.
T Consensus 7 vvvl~SGGkDSs~al~~l~~~---------G-----~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~ 72 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWAIKN---------R-----FSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQ 72 (237)
T ss_dssp EEEECCSSHHHHHHHHHHHHT---------T-----CEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC-
T ss_pred EEEEecCcHHHHHHHHHHHHc---------C-----CeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECC
Confidence 367889999998776654322 2 2221 121 12345677888999999988885
Q ss_pred CCccccCHHHHHHHHhh-CceEEEEecCCCcccccC--C-HHHHHHHHHHh
Q 018437 185 EGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFE--D-VKLLHDLLTKK 231 (356)
Q Consensus 185 ~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~--~-i~~I~~i~~~~ 231 (356)
.. ..-..++|.+++.+ ....++ +|.+. . -..+-.+|.+.
T Consensus 73 g~-~~~e~e~l~~~l~~~~i~~vv-------~Gdi~s~yqr~r~e~vc~~~ 115 (237)
T 3rjz_A 73 GE-KEKEVEDLKRVLSGLKIQGIV-------AGALASKYQRKRIEKVAKEL 115 (237)
T ss_dssp ------CHHHHHHHHTTSCCSEEE-------CC---CCSHHHHHHHHHHHT
T ss_pred CC-chHHHHHHHHHHHhcCCcEEE-------ECCcchHHHHHHHHHHHHHc
Confidence 42 22336777777764 222222 35552 2 24577788887
No 263
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=25.48 E-value=2.3e+02 Score=23.95 Aligned_cols=64 Identities=9% Similarity=-0.042 Sum_probs=33.6
Q ss_pred HHHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEE-Ee
Q 018437 168 EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIH-VD 244 (356)
Q Consensus 168 ~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~-vD 244 (356)
...++..|..+..+... + ..-..+.++..+..+...|++...... ......+.+++. +++++ +|
T Consensus 25 ~~~a~~~g~~~~~~~~~-~-~~~~~~~i~~l~~~~vdgiii~~~~~~-----~~~~~~~~~~~~------~iPvV~~~ 89 (306)
T 8abp_A 25 DKAGKDLGFEVIKIAVP-D-GEKTLNAIDSLAASGAKGFVICTPDPK-----LGSAIVAKARGY------DMKVIAVD 89 (306)
T ss_dssp HHHHHHHTEEEEEEECC-S-HHHHHHHHHHHHHTTCCEEEEECSCGG-----GHHHHHHHHHHT------TCEEEEES
T ss_pred HHHHHHcCCEEEEeCCC-C-HHHHHHHHHHHHHcCCCEEEEeCCCch-----hhHHHHHHHHHC------CCcEEEeC
Confidence 34455567777655432 1 122234566666667766665543221 344555556666 77654 34
No 264
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=25.47 E-value=3.5e+02 Score=23.82 Aligned_cols=71 Identities=10% Similarity=0.057 Sum_probs=42.8
Q ss_pred CeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHh---h-CceEEEEecCCCcccccCCHHHHHHHHHH
Q 018437 155 PNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD---E-NTICVAAILGSTLTGEFEDVKLLHDLLTK 230 (356)
Q Consensus 155 ~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~---~-~~~~v~~~~~~~~tG~~~~i~~I~~i~~~ 230 (356)
..++++ |.++.-.++.+|+++..+.-........+..|.+.++ + +.++|+ +-++.+ -+.+..++++
T Consensus 191 ~~~v~~---H~af~Yfa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If-~e~~~~------~~~~~~ia~e 260 (312)
T 2o1e_A 191 KEFITQ---HTAFGYLAKEYGLKQVPIAGLSPDQEPSAASLAKLKTYAKEHNVKVIY-FEEIAS------SKVADTLASE 260 (312)
T ss_dssp CEEEES---SCTTHHHHHHTTCEEEECSSCCSSSCCCHHHHHHHHHHTTSSCCCEEE-CSSCCC------HHHHHHHHHH
T ss_pred CEEEEE---CCchHHHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCCEEE-EeCCCC------hHHHHHHHHH
Confidence 456554 6677888999999976553211125677777766664 3 445554 333333 2455566888
Q ss_pred hhhccCCCCcE
Q 018437 231 KNEETGWDTPI 241 (356)
Q Consensus 231 ~~~~~~~~~~l 241 (356)
. |+.+
T Consensus 261 ~------g~~v 265 (312)
T 2o1e_A 261 I------GAKT 265 (312)
T ss_dssp T------CCEE
T ss_pred h------CCcE
Confidence 8 7765
No 265
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=25.04 E-value=81 Score=28.04 Aligned_cols=53 Identities=9% Similarity=-0.101 Sum_probs=34.0
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (356)
++..++|..+..+|..+.+. | -+-.|++|...-..-...++.+|++|+.++-+
T Consensus 77 vv~~ssGN~g~alA~~a~~~---------G---~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 129 (323)
T 1v71_A 77 VLTFSSGNHAQAIALSAKIL---------G---IPAKIIMPLDAPEAKVAATKGYGGQVIMYDRY 129 (323)
T ss_dssp EEECCSSHHHHHHHHHHHHT---------T---CCEEEEEETTCCHHHHHHHHHTTCEEEEECTT
T ss_pred EEEeCCCcHHHHHHHHHHHc---------C---CCEEEECCCCCcHHHHHHHHHcCCEEEEECCC
Confidence 45555666776666554422 1 13477888766555667778889999988754
No 266
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=25.04 E-value=82 Score=28.38 Aligned_cols=53 Identities=17% Similarity=0.134 Sum_probs=34.5
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (356)
++..++|..+..+|..+... | -+-.|++|...-..-...++.+|++|+.++.+
T Consensus 81 vv~aSsGN~g~alA~aa~~~---------G---~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 133 (343)
T 2pqm_A 81 IIESTSGNTGIALCQAGAVF---------G---YRVNIAMPSTMSVERQMIMKAFGAELILTEGK 133 (343)
T ss_dssp EEEECSSHHHHHHHHHHHHH---------T---CCEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred EEEECCcHHHHHHHHHHHHc---------C---CCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 45556677776666554432 1 12478888766555667778889999988753
No 267
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=24.97 E-value=1.8e+02 Score=25.59 Aligned_cols=53 Identities=21% Similarity=0.070 Sum_probs=34.1
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEec
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~ 184 (356)
++..++|..+..+|..+.+. | -+-.|++|...-..-...++.+|++|+.++.+
T Consensus 70 vv~assGN~g~alA~aa~~~---------G---~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 122 (322)
T 1z7w_A 70 LIEPTSGNTGVGLAFTAAAK---------G---YKLIITMPASMSTERRIILLAFGVELVLTDPA 122 (322)
T ss_dssp EEEECSSHHHHHHHHHHHHH---------T---CEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred EEEeCCCHHHHHHHHHHHHc---------C---CCEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 44455667776666654432 1 12367888766555667778889999887753
No 268
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=24.88 E-value=1.4e+02 Score=24.97 Aligned_cols=36 Identities=14% Similarity=-0.046 Sum_probs=29.7
Q ss_pred CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEE
Q 018437 202 NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (356)
Q Consensus 202 ~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~v 243 (356)
.|..|++-.-.+..|......++.+++++| ++.++.
T Consensus 159 ~Pa~vicEi~~~~dG~mar~~~l~~fA~~h------~l~iit 194 (204)
T 1tks_A 159 QPAGVICELVRDEDGLMMRLDDCIQFGKKH------GIKIIN 194 (204)
T ss_dssp CSBEEEEEBBCTTTCCBCBHHHHHHHHHHH------TCCEEE
T ss_pred CceEEEEEEeECCCCCcCCHHHHHHHHHHc------CCcEEE
Confidence 577777666657889999999999999999 987764
No 269
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=24.83 E-value=2.6e+02 Score=23.34 Aligned_cols=18 Identities=11% Similarity=0.069 Sum_probs=7.6
Q ss_pred HHHHHHHhhCceEEEEec
Q 018437 193 VKAVELVDENTICVAAIL 210 (356)
Q Consensus 193 ~~L~~~i~~~~~~v~~~~ 210 (356)
+.++.+...+..+|++..
T Consensus 76 ~~~~~l~~~~iPvV~i~~ 93 (276)
T 3jy6_A 76 QTVQEILHQQMPVVSVDR 93 (276)
T ss_dssp HHHHHHHTTSSCEEEESC
T ss_pred HHHHHHHHCCCCEEEEec
Confidence 334433334444554443
No 270
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=24.80 E-value=40 Score=28.83 Aligned_cols=61 Identities=7% Similarity=-0.119 Sum_probs=38.9
Q ss_pred CCeEEecCCCcc--hHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHh--hCceEEEEecCCCc
Q 018437 154 KPNIVTGANVQV--CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD--ENTICVAAILGSTL 214 (356)
Q Consensus 154 ~~~vi~s~~~h~--s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~--~~~~~v~~~~~~~~ 214 (356)
+.+|+++.+... .+...++..|++++.+|+-+-...-|.+.|++.+. .+...|+++++|..
T Consensus 6 g~~vlvtRp~~~~~~l~~~L~~~G~~~~~~P~i~i~~~~~~~~l~~~l~~l~~~d~vifTS~~aV 70 (254)
T 4es6_A 6 GWRLLLTRPDEECAALAASLGEAGVHSSSLPLLAIDPLEETPEQRTLMLDLDRYCAVVVVSKPAA 70 (254)
T ss_dssp CCEEEECSCHHHHHHHHHHHHHTTCEEEECCSCEEEECCCCHHHHHHHHTGGGCSEEEECSHHHH
T ss_pred CCEEEEeCChHHhHHHHHHHHHCCCcEEEeCCEEEeeCcChHHHHHHHHhccCCCEEEEECHHHH
Confidence 568999888654 35666777899998888743111223345665554 24567887877654
No 271
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=24.32 E-value=1.9e+02 Score=24.55 Aligned_cols=66 Identities=12% Similarity=-0.016 Sum_probs=32.6
Q ss_pred HHHHHHhhCCeeEEEEecC-CccccCHHHHHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEE
Q 018437 167 WEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (356)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~v 243 (356)
+.+.++..|..+.....+. ++..-..+.++..+..+...|++.... . +.+....+.+++. +++++.
T Consensus 25 i~~~a~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~-~----~~~~~~~~~~~~~------giPvV~ 91 (297)
T 3rot_A 25 AKKAAEELKVDLQILAPPGANDVPKQVQFIESALATYPSGIATTIPS-D----TAFSKSLQRANKL------NIPVIA 91 (297)
T ss_dssp HHHHHHHHTCEEEEECCSSSCCHHHHHHHHHHHHHTCCSEEEECCCC-S----STTHHHHHHHHHH------TCCEEE
T ss_pred HHHHHHHhCcEEEEECCCCcCCHHHHHHHHHHHHHcCCCEEEEeCCC-H----HHHHHHHHHHHHC------CCCEEE
Confidence 3445555677776655431 011112244555556666666653322 2 1234555566666 665543
No 272
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=24.15 E-value=3.1e+02 Score=22.97 Aligned_cols=39 Identities=5% Similarity=0.012 Sum_probs=17.1
Q ss_pred HHHHhhCCeeEEEEecCCccccCHHHHHHHHhhCceEEEE
Q 018437 169 KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAA 208 (356)
Q Consensus 169 ~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~~~~v~~ 208 (356)
..++..|..+.....+.+ ..-..+.++..+..+...|++
T Consensus 25 ~~~~~~g~~~~~~~~~~~-~~~~~~~i~~l~~~~vdgiIi 63 (283)
T 2ioy_A 25 EKAKELGYKIIVEDSQND-SSKELSNVEDLIQQKVDVLLI 63 (283)
T ss_dssp HHHHHHTCEEEEEECTTC-HHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHhcCcEEEEecCCCC-HHHHHHHHHHHHHcCCCEEEE
Confidence 334445666555443221 111123344555555555554
No 273
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=23.97 E-value=3.5e+02 Score=23.39 Aligned_cols=72 Identities=15% Similarity=0.165 Sum_probs=41.3
Q ss_pred CeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHH---hh-CceEEEEecCCCcccccCCHHHHHHHHHH
Q 018437 155 PNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV---DE-NTICVAAILGSTLTGEFEDVKLLHDLLTK 230 (356)
Q Consensus 155 ~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i---~~-~~~~v~~~~~~~~tG~~~~i~~I~~i~~~ 230 (356)
..++++ |.++.-.++.+|+++..+.--.......+..|.+.+ ++ +.++|+.. ++.+. +.+..++++
T Consensus 180 ~~~v~~---H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e-~~~~~------~~~~~la~~ 249 (286)
T 3gi1_A 180 KTFVTQ---HTAFSYLAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAE-DNVNP------KIAHAIAKS 249 (286)
T ss_dssp CEEEEE---ESCCHHHHHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHTTCCEEEEC-TTSCT------HHHHHHHHT
T ss_pred CEEEEE---CCchHHHHHHCCCeEeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEe-CCCCh------HHHHHHHHH
Confidence 455554 667778889999998766532112456666665554 43 55666544 33332 334456788
Q ss_pred hhhccCCCCcEE
Q 018437 231 KNEETGWDTPIH 242 (356)
Q Consensus 231 ~~~~~~~~~~l~ 242 (356)
. |+.+.
T Consensus 250 ~------g~~v~ 255 (286)
T 3gi1_A 250 T------GAKVK 255 (286)
T ss_dssp T------TCEEE
T ss_pred h------CCeEE
Confidence 8 87654
No 274
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=23.65 E-value=2.2e+02 Score=24.86 Aligned_cols=52 Identities=19% Similarity=0.161 Sum_probs=33.9
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (356)
++..++|..+..+|..+.+. | -+-.|++|...-..-...++.+|++|+.++.
T Consensus 64 vv~~ssGN~g~a~A~~a~~~---------G---~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~ 115 (303)
T 2v03_A 64 LIEATSGNTGIALAMIAALK---------G---YRMKLLMPDNMSQERRAAMRAYGAELILVTK 115 (303)
T ss_dssp EEEECSSHHHHHHHHHHHHH---------T---CEEEEEEETTSCHHHHHHHHHTTCEEEEECT
T ss_pred EEEECCcHHHHHHHHHHHHc---------C---CcEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 45555677776666554422 1 1236778876555666777889999998875
No 275
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=23.44 E-value=3.4e+02 Score=23.02 Aligned_cols=83 Identities=14% Similarity=0.075 Sum_probs=47.4
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHH
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i 199 (356)
.++.+||+.++=.++.-.... . +.+|++...........+...+.++..+.+|-. |.+.+++++
T Consensus 29 ~vlVTGas~GIG~aia~~l~~-------~-----G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~----d~~~v~~~~ 92 (277)
T 4dqx_A 29 VCIVTGGGSGIGRATAELFAK-------N-----GAYVVVADVNEDAAVRVANEIGSKAFGVRVDVS----SAKDAESMV 92 (277)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-------T-----TCEEEEEESSHHHHHHHHHHHCTTEEEEECCTT----CHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHH-------C-----CCEEEEEeCCHHHHHHHHHHhCCceEEEEecCC----CHHHHHHHH
Confidence 455667666654443322211 1 346666554444555556666778888887642 556666555
Q ss_pred hh------CceEEEEecCCCccccc
Q 018437 200 DE------NTICVAAILGSTLTGEF 218 (356)
Q Consensus 200 ~~------~~~~v~~~~~~~~tG~~ 218 (356)
++ +..+++-+++....+.+
T Consensus 93 ~~~~~~~g~iD~lv~nAg~~~~~~~ 117 (277)
T 4dqx_A 93 EKTTAKWGRVDVLVNNAGFGTTGNV 117 (277)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCBCT
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCc
Confidence 42 45677777776655544
No 276
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=23.34 E-value=3.3e+02 Score=22.77 Aligned_cols=13 Identities=0% Similarity=-0.296 Sum_probs=5.8
Q ss_pred HHhhCCeeEEEEe
Q 018437 171 ARYFEVELKEVKL 183 (356)
Q Consensus 171 ~~~~G~~v~~v~~ 183 (356)
++..|..+.....
T Consensus 41 a~~~g~~~~~~~~ 53 (298)
T 3tb6_A 41 LSEQGYSMLLTST 53 (298)
T ss_dssp HHHTTCEEEEEEC
T ss_pred HHHCCCEEEEEeC
Confidence 3334555544443
No 277
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=23.06 E-value=4.2e+02 Score=24.12 Aligned_cols=52 Identities=12% Similarity=-0.092 Sum_probs=33.1
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (356)
++..++|..+...|..+.+. | -+-.|++|...-..-...++.+|++|+.++-
T Consensus 115 vv~aSsGNhg~a~A~aa~~~---------G---~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~ 166 (398)
T 4d9i_A 115 FATTTDGNHGRGVAWAAQQL---------G---QNAVIYMPKGSAQERVDAILNLGAECIVTDM 166 (398)
T ss_dssp EEEECSSHHHHHHHHHHHHH---------T---CEEEEEECTTCCHHHHHHHHTTTCEEEECSS
T ss_pred EEEECCCHHHHHHHHHHHHc---------C---CCEEEEEeCCCCHHHHHHHHHcCCEEEEECC
Confidence 45566677776666554432 1 1236788876655566777888999877653
No 278
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=22.89 E-value=40 Score=32.01 Aligned_cols=33 Identities=12% Similarity=0.032 Sum_probs=28.1
Q ss_pred CCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccc
Q 018437 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (356)
Q Consensus 211 ~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~ 249 (356)
.+.-.|+.++++++++.|+++ |+-+++|.+...
T Consensus 71 id~~~Gt~~df~~lv~~aH~~------Gi~VilD~V~NH 103 (483)
T 3bh4_A 71 VRTKYGTKSELQDAIGSLHSR------NVQVYGDVVLNH 103 (483)
T ss_dssp SSCSSCCHHHHHHHHHHHHHT------TCEEEEEECCSE
T ss_pred cCCCCCCHHHHHHHHHHHHHC------CCEEEEEEccCc
Confidence 344568899999999999999 999999988654
No 279
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=22.62 E-value=41 Score=31.84 Aligned_cols=33 Identities=15% Similarity=0.031 Sum_probs=28.1
Q ss_pred CCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccc
Q 018437 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (356)
Q Consensus 211 ~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~ 249 (356)
.+.-.|+.++++++++-|+++ |+.+++|.+...
T Consensus 73 idp~~Gt~~df~~lv~~aH~~------Gi~VilD~V~NH 105 (480)
T 1ud2_A 73 VRTKYGTKAQLERAIGSLKSN------DINVYGDVVMNH 105 (480)
T ss_dssp SSCSSCCHHHHHHHHHHHHHT------TCEEEEEECCSE
T ss_pred cCCCCCCHHHHHHHHHHHHHC------CCEEEEEEccCc
Confidence 344468899999999999999 999999988654
No 280
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=22.32 E-value=81 Score=27.59 Aligned_cols=70 Identities=17% Similarity=0.229 Sum_probs=42.6
Q ss_pred CcchHHHHHHhhCCeeEEEE-ecCCccccCHHHHHHHHh---h-CceEEEEecCCCcccccCCHHHHHHHHHHhhhccCC
Q 018437 163 VQVCWEKFARYFEVELKEVK-LEEGYYVMNPVKAVELVD---E-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGW 237 (356)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~v~-~~~~~~~~d~~~L~~~i~---~-~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~ 237 (356)
.|.++.-.++.+|++.+.+. +..+ ....+..|.+.++ + +.++|+.. ++.+ -.-.+.|.++|++.
T Consensus 169 ~H~af~Y~~~~yGl~~~~~~~~~~~-~eps~~~l~~l~~~ik~~~v~~if~e-~~~~---~~~~~~l~~~a~~~------ 237 (282)
T 3mfq_A 169 PHDAFNYFAASYDFTLYAPQGVSTD-SEVANSDMIETVNLIIDHNIKAIFTE-STTN---PERMKKLQEAVKAK------ 237 (282)
T ss_dssp SSSCCHHHHHHTTCEEECSSCSSSC-SCCCHHHHHHHHHHHHHHTCCEEECB-TTSC---THHHHHHHHHHHTT------
T ss_pred ECchHHHHHHHCCCeEecccccCCC-CCCCHHHHHHHHHHHHHcCCCEEEEe-CCCC---hHHHHHHHHHHHhc------
Confidence 46677788899999976542 2232 4566666666553 3 56666633 3222 11267788889988
Q ss_pred CCcEEE
Q 018437 238 DTPIHV 243 (356)
Q Consensus 238 ~~~l~v 243 (356)
|+.+.+
T Consensus 238 g~~v~~ 243 (282)
T 3mfq_A 238 GGQVEV 243 (282)
T ss_dssp SCCCEE
T ss_pred CCceEE
Confidence 875543
No 281
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=22.19 E-value=43 Score=31.80 Aligned_cols=33 Identities=12% Similarity=0.016 Sum_probs=28.2
Q ss_pred CCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccc
Q 018437 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (356)
Q Consensus 211 ~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~ 249 (356)
.+.-.|+.++++++++.|+++ |+.+++|.+...
T Consensus 75 idp~~Gt~~df~~Lv~~aH~~------Gi~VilD~V~NH 107 (485)
T 1wpc_A 75 VRTKYGTRSQLQAAVTSLKNN------GIQVYGDVVMNH 107 (485)
T ss_dssp SSCSSCCHHHHHHHHHHHHHT------TCEEEEEECCSE
T ss_pred cCCCCCCHHHHHHHHHHHHHC------CCEEEEEEeccc
Confidence 344568899999999999999 999999988653
No 282
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=22.04 E-value=44 Score=31.32 Aligned_cols=33 Identities=15% Similarity=0.024 Sum_probs=27.9
Q ss_pred CCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccc
Q 018437 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (356)
Q Consensus 211 ~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~ 249 (356)
.+.-.|+.++++++++-|+++ |+-+++|.+...
T Consensus 79 id~~~Gt~~df~~lv~~~H~~------Gi~VilD~V~NH 111 (435)
T 1mxg_A 79 VETRFGSKEELVRLIQTAHAY------GIKVIADVVINH 111 (435)
T ss_dssp SSCSSCCHHHHHHHHHHHHHT------TCEEEEEECCSB
T ss_pred CCCCCCCHHHHHHHHHHHHHC------CCEEEEEECccc
Confidence 344568889999999999999 999999988654
No 283
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=21.92 E-value=65 Score=24.84 Aligned_cols=42 Identities=14% Similarity=-0.022 Sum_probs=29.7
Q ss_pred HHHHHhhCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccc
Q 018437 195 AVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (356)
Q Consensus 195 L~~~i~~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~ 249 (356)
++++++...+.++++.+. . -+++.++|+++ |+-++-+.+.|-
T Consensus 87 ~~~~~~~gi~~i~~~~g~-----~--~~~~~~~a~~~------Gir~vgpnc~g~ 128 (140)
T 1iuk_A 87 LPEVLALRPGLVWLQSGI-----R--HPEFEKALKEA------GIPVVADRCLMV 128 (140)
T ss_dssp HHHHHHHCCSCEEECTTC-----C--CHHHHHHHHHT------TCCEEESCCHHH
T ss_pred HHHHHHcCCCEEEEcCCc-----C--HHHHHHHHHHc------CCEEEcCCccce
Confidence 445555566666654432 2 38899999999 999998888764
No 284
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=21.84 E-value=44 Score=32.10 Aligned_cols=33 Identities=9% Similarity=-0.104 Sum_probs=28.1
Q ss_pred CCCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccc
Q 018437 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (356)
Q Consensus 211 ~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~ 249 (356)
.+.-.|+.++++++++.|+++ |+.+++|.+...
T Consensus 74 idp~~Gt~~dfk~Lv~~aH~~------Gi~VilD~V~NH 106 (515)
T 1hvx_A 74 VRTKYGTKAQYLQAIQAAHAA------GMQVYADVVFDH 106 (515)
T ss_dssp SSCSSCCHHHHHHHHHHHHHT------TCEEEEEECCSE
T ss_pred cCCCCCCHHHHHHHHHHHHHC------CCEEEEEEecCC
Confidence 344468899999999999999 999999988654
No 285
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=21.77 E-value=2.4e+02 Score=26.37 Aligned_cols=53 Identities=9% Similarity=-0.048 Sum_probs=36.4
Q ss_pred CeEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe
Q 018437 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (356)
Q Consensus 119 ~~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (356)
.++.+++|..+...|+.+.+.- -+-.|++|...-..-...++.+|++|+.++-
T Consensus 162 ~vv~aSsGNhg~avA~~aa~~G------------~~~~Ivmp~~~~~~k~~~~r~~GA~Vv~v~~ 214 (442)
T 3ss7_X 162 SIAVGSTGNLGLSIGIMSARIG------------FKVTVHMSADARAWKKAKLRSHGVTVVEYEQ 214 (442)
T ss_dssp EEEEECSSHHHHHHHHHHHHHT------------CEEEEEEETTSCHHHHHHHHHTTCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHhC------------CcEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 3667778888887777665431 1237888877655566777788999977763
No 286
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=21.74 E-value=2.6e+02 Score=23.08 Aligned_cols=15 Identities=0% Similarity=-0.188 Sum_probs=7.1
Q ss_pred HHHHHHhhC-ceEEEE
Q 018437 194 KAVELVDEN-TICVAA 208 (356)
Q Consensus 194 ~L~~~i~~~-~~~v~~ 208 (356)
.++..+..+ ...|++
T Consensus 50 ~i~~l~~~~~vdgii~ 65 (276)
T 3ksm_A 50 ILSYHLSQAPPDALIL 65 (276)
T ss_dssp HHHHHHHHSCCSEEEE
T ss_pred HHHHHHHhCCCCEEEE
Confidence 344444445 555544
No 287
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=21.45 E-value=41 Score=32.40 Aligned_cols=31 Identities=10% Similarity=0.040 Sum_probs=27.6
Q ss_pred CcccccCCHHHHHHHHHHhhhccCCCCcEEEeccccc
Q 018437 213 TLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (356)
Q Consensus 213 ~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~~ 249 (356)
...|+.++++++++-||++ |+-+++|.++..
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~------GI~VilD~V~NH 117 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGA------GVKVLYDVVPNH 117 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHT------TCEEEEEECCSB
T ss_pred CCCCCHHHHHHHHHHHHHC------CCEEEEEEeecC
Confidence 6679999999999999999 999999987654
No 288
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=21.21 E-value=44 Score=31.22 Aligned_cols=32 Identities=9% Similarity=0.045 Sum_probs=26.0
Q ss_pred CCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccc
Q 018437 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (356)
Q Consensus 211 ~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~ 248 (356)
.+.-.|+.++++++++-|+++ |+.+++|.+..
T Consensus 62 idp~~Gt~~df~~lv~~aH~~------Gi~VilD~V~N 93 (441)
T 1lwj_A 62 FKAEYGSEREFKEMIEAFHDS------GIKVVLDLPIH 93 (441)
T ss_dssp ECTTTCCHHHHHHHHHHHHHT------TCEEEEEECTT
T ss_pred cCcccCCHHHHHHHHHHHHHC------CCEEEEEeCCC
Confidence 344568888899999999999 99999998754
No 289
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=21.15 E-value=3.2e+02 Score=21.86 Aligned_cols=53 Identities=8% Similarity=-0.170 Sum_probs=31.7
Q ss_pred hHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh---CceEEEEecCCCcccccCCHHH
Q 018437 166 CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFEDVKL 223 (356)
Q Consensus 166 s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~~~~v~~~~~~~~tG~~~~i~~ 223 (356)
.+...+...|+++..+.+=.| |.+.+++++.+ +..+|+.+-|..+ |.-|=..+
T Consensus 27 ~l~~~L~~~G~~v~~~~iv~D----d~~~I~~~l~~a~~~~DlVittGG~g~-~~~D~T~e 82 (172)
T 3kbq_A 27 FIGNFLTYHGYQVRRGFVVMD----DLDEIGWAFRVALEVSDLVVSSGGLGP-TFDDMTVE 82 (172)
T ss_dssp HHHHHHHHTTCEEEEEEEECS----CHHHHHHHHHHHHHHCSEEEEESCCSS-STTCCHHH
T ss_pred HHHHHHHHCCCEEEEEEEeCC----CHHHHHHHHHHHHhcCCEEEEcCCCcC-CcccchHH
Confidence 355666678999887776444 45556555543 3456766666655 55544433
No 290
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=21.11 E-value=1.9e+02 Score=24.97 Aligned_cols=70 Identities=10% Similarity=0.068 Sum_probs=43.7
Q ss_pred chHHHHHHh---hCCe-eEEEEecCCccccCHHHHHHHHh---hCceEEEEecCCCccccc--CCHHHHHHHHHHhhhcc
Q 018437 165 VCWEKFARY---FEVE-LKEVKLEEGYYVMNPVKAVELVD---ENTICVAAILGSTLTGEF--EDVKLLHDLLTKKNEET 235 (356)
Q Consensus 165 ~s~~~~~~~---~G~~-v~~v~~~~~~~~~d~~~L~~~i~---~~~~~v~~~~~~~~tG~~--~~i~~I~~i~~~~~~~~ 235 (356)
.++..++.+ +|+. +++.|.. |.-.+++++...+ ++-. .+ -|||.+ +++++|.++|.+.
T Consensus 168 V~vetAiaml~dmG~~SvKffPM~---Gl~~leEl~avAkAca~~g~-~l-----EPTGGIdl~Nf~~I~~i~l~a---- 234 (275)
T 3m6y_A 168 VPIKTAIALVRDMGGNSLKYFPMK---GLAHEEEYRAVAKACAEEGF-AL-----EPTGGIDKENFETIVRIALEA---- 234 (275)
T ss_dssp EEHHHHHHHHHHHTCCEEEECCCT---TTTTHHHHHHHHHHHHHHTC-EE-----EEBSSCCTTTHHHHHHHHHHT----
T ss_pred eeHHHHHHHHHHcCCCeeeEeecC---CcccHHHHHHHHHHHHHcCc-eE-----CCCCCccHhHHHHHHHHHHHc----
Confidence 345665554 3655 7778875 3334555554433 2222 22 588987 6899999999999
Q ss_pred CCCCcEEEeccccc
Q 018437 236 GWDTPIHVDAASGG 249 (356)
Q Consensus 236 ~~~~~l~vD~a~~~ 249 (356)
|+..+.-=.|+.
T Consensus 235 --Gv~~viPHIYsS 246 (275)
T 3m6y_A 235 --NVEQVIPHVYSS 246 (275)
T ss_dssp --TCSCBCCEECGG
T ss_pred --CCCeecccccce
Confidence 876555444543
No 291
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=20.82 E-value=1.6e+02 Score=26.48 Aligned_cols=52 Identities=13% Similarity=0.028 Sum_probs=33.8
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEe
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~ 183 (356)
++..++|..+...|..+.+. | -+-.|++|...-..-...++.+|++|+.++-
T Consensus 79 vv~~SsGNhg~a~A~aa~~~---------G---~~~~iv~p~~~~~~k~~~~~~~GA~V~~v~~ 130 (346)
T 3l6b_A 79 VVTHSSGNHGQALTYAAKLE---------G---IPAYIVVPQTAPDCKKLAIQAYGASIVYCEP 130 (346)
T ss_dssp EEEECSSHHHHHHHHHHHHT---------T---CCEEEEEETTSCHHHHHHHHHTTCEEEEECS
T ss_pred EEEeCCCHHHHHHHHHHHHh---------C---CCEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 55556677776666554322 1 1347888877655566778889999988764
No 292
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=20.77 E-value=1.4e+02 Score=22.62 Aligned_cols=35 Identities=14% Similarity=0.265 Sum_probs=24.4
Q ss_pred HHHh-hCceEEEEecCCCcccccCCHHHHHHHHHHhhhccCCCCcEEE
Q 018437 197 ELVD-ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (356)
Q Consensus 197 ~~i~-~~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~v 243 (356)
.++. .++.+|+++.+.. |-+++.++|+++ +++++.
T Consensus 68 ~a~~~~~~~~iIlt~g~~------~~~~i~~~A~~~------~ipvl~ 103 (139)
T 2ioj_A 68 TALEMPNVRCLILTGNLE------PVQLVLTKAEER------GVPVIL 103 (139)
T ss_dssp HHTTCTTEEEEEEETTCC------CCHHHHHHHHHH------TCCEEE
T ss_pred HHHhCCCCcEEEEcCCCC------CCHHHHHHHHHC------CCeEEE
Confidence 4454 5677777776544 467778899988 887765
No 293
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=20.77 E-value=3.3e+02 Score=21.79 Aligned_cols=54 Identities=6% Similarity=-0.052 Sum_probs=32.4
Q ss_pred chHHHHHHhhCCeeEEEEecCCccccCHHHHHHHHhh---C--ceEEEEecCCCcccccCCHHH
Q 018437 165 VCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---N--TICVAAILGSTLTGEFEDVKL 223 (356)
Q Consensus 165 ~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~--~~~v~~~~~~~~tG~~~~i~~ 223 (356)
+.+...++..|+++....+=+| |.+.+++++.+ + ..+|+.+-++.+ |.-|-..+
T Consensus 43 ~~L~~~l~~~G~~v~~~~iv~D----d~~~I~~al~~a~~~~~~DlVittGG~s~-g~~D~t~e 101 (178)
T 2pjk_A 43 DIIKQLLIENGHKIIGYSLVPD----DKIKILKAFTDALSIDEVDVIISTGGTGY-SPTDITVE 101 (178)
T ss_dssp HHHHHHHHHTTCEEEEEEEECS----CHHHHHHHHHHHHTCTTCCEEEEESCCSS-STTCCHHH
T ss_pred HHHHHHHHHCCCEEEEEEEeCC----CHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCcchHH
Confidence 3456667778999887765444 45666655543 2 556665555555 66654443
No 294
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=20.45 E-value=1.5e+02 Score=26.27 Aligned_cols=30 Identities=7% Similarity=-0.028 Sum_probs=23.3
Q ss_pred CeEEecCCC-cchHHHHHHhhCCeeEEEEec
Q 018437 155 PNIVTGANV-QVCWEKFARYFEVELKEVKLE 184 (356)
Q Consensus 155 ~~vi~s~~~-h~s~~~~~~~~G~~v~~v~~~ 184 (356)
-.|++|... -......++.+|++|+.++-+
T Consensus 98 ~~iv~p~~~~~~~k~~~~~~~GA~v~~~~~~ 128 (325)
T 1j0a_A 98 AILVLRGKEELKGNYLLDKIMGIETRVYDAK 128 (325)
T ss_dssp EEEEEESCCCSCHHHHHHHHTTCEEEEESCC
T ss_pred EEEEECCCCCCCchHHHHHHCCCEEEEeCcc
Confidence 378888776 556778888899999988754
No 295
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=20.37 E-value=47 Score=31.83 Aligned_cols=32 Identities=16% Similarity=0.121 Sum_probs=26.9
Q ss_pred CCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccc
Q 018437 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (356)
Q Consensus 211 ~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~ 248 (356)
++.-.|+.++++++++-|+++ |+.|++|.++.
T Consensus 72 vdp~~Gt~~dfk~Lv~~aH~~------Gi~VilD~V~N 103 (549)
T 4aie_A 72 IDPQYGTMADMDELISKAKEH------HIKIVMDLVVN 103 (549)
T ss_dssp ECTTTCCHHHHHHHHHHHHHT------TCEEEEEECCS
T ss_pred cCcccCCHHHHHHHHHHHHHC------CCEEEEEECcc
Confidence 444568889999999999999 99999998864
No 296
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=20.30 E-value=4e+02 Score=22.61 Aligned_cols=83 Identities=11% Similarity=0.025 Sum_probs=47.3
Q ss_pred eEEeCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecCCCcchHHHHHHhhCCeeEEEEecCCccccCHHHHHHHH
Q 018437 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (356)
Q Consensus 120 ~~~t~Ggt~a~~~al~~~~~~~~~~~~~~g~~~~~~~vi~s~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i 199 (356)
.++.+||+.++=.++.-.... . +.+|++..-........++.++.++..+.+|-. |.+.+++.+
T Consensus 31 ~vlVTGas~gIG~aia~~la~-------~-----G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~----d~~~v~~~~ 94 (277)
T 3gvc_A 31 VAIVTGAGAGIGLAVARRLAD-------E-----GCHVLCADIDGDAADAAATKIGCGAAACRVDVS----DEQQIIAMV 94 (277)
T ss_dssp EEEETTTTSTHHHHHHHHHHH-------T-----TCEEEEEESSHHHHHHHHHHHCSSCEEEECCTT----CHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHH-------C-----CCEEEEEeCCHHHHHHHHHHcCCcceEEEecCC----CHHHHHHHH
Confidence 466677776654443322211 1 346666554444555666666777888887642 556665555
Q ss_pred hh------CceEEEEecCCCccccc
Q 018437 200 DE------NTICVAAILGSTLTGEF 218 (356)
Q Consensus 200 ~~------~~~~v~~~~~~~~tG~~ 218 (356)
++ +..+++-+++....+.+
T Consensus 95 ~~~~~~~g~iD~lvnnAg~~~~~~~ 119 (277)
T 3gvc_A 95 DACVAAFGGVDKLVANAGVVHLASL 119 (277)
T ss_dssp HHHHHHHSSCCEEEECCCCCCCBCT
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCh
Confidence 42 45677777776655544
No 297
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=20.30 E-value=41 Score=31.79 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=27.5
Q ss_pred cCCCcccccCCHHHHHHHHHHhhhccCCCCcEEEecccc
Q 018437 210 LGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (356)
Q Consensus 210 ~~~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~~ 248 (356)
..+.-.|+.++++++++-|+++ |+-+++|.+..
T Consensus 89 ~idp~~Gt~~df~~lv~~~H~~------Gi~VilD~V~N 121 (478)
T 2guy_A 89 SLNENYGTADDLKALSSALHER------GMYLMVDVVAN 121 (478)
T ss_dssp EECTTSCCHHHHHHHHHHHHHT------TCEEEEEECCS
T ss_pred ccCccCCCHHHHHHHHHHHHHC------CCEEEEEECcc
Confidence 3455668889999999999999 99999998754
No 298
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=20.24 E-value=4.2e+02 Score=22.80 Aligned_cols=71 Identities=10% Similarity=0.061 Sum_probs=40.6
Q ss_pred CeEEecCCCcchHHHHHHhhCCeeEEEE-ecCCccccCHHHHHHHHh---h-CceEEEEecCCCcccccCCHHHHHHHHH
Q 018437 155 PNIVTGANVQVCWEKFARYFEVELKEVK-LEEGYYVMNPVKAVELVD---E-NTICVAAILGSTLTGEFEDVKLLHDLLT 229 (356)
Q Consensus 155 ~~vi~s~~~h~s~~~~~~~~G~~v~~v~-~~~~~~~~d~~~L~~~i~---~-~~~~v~~~~~~~~tG~~~~i~~I~~i~~ 229 (356)
..++++ |.++.-.++.+|+++..+. +..+ ....+..|.+.++ + +.++|+.. ++.+ -+.+..+++
T Consensus 175 ~~~v~~---H~af~Yf~~~yGl~~~~~~~~~~~-~eps~~~l~~l~~~ik~~~v~~if~e-~~~~------~~~~~~ia~ 243 (284)
T 2prs_A 175 KGYFVF---HDAYGYFEKQFGLTPLGHFTVNPE-IQPGAQRLHEIRTQLVEQKATCVFAE-PQFR------PAVVESVAR 243 (284)
T ss_dssp CCEEEE---ESCCHHHHHHHTCCCCEEEESSTT-SCCCHHHHHHHHHHHHHTTCCEEEEC-TTSC------SHHHHHHTT
T ss_pred CeEEEE---CccHHHHHHHCCCeEeEeeccCCC-CCCCHHHHHHHHHHHHHcCCCEEEEe-CCCC------hHHHHHHHH
Confidence 345554 6677788899999876554 3332 4666666665553 3 45556543 3332 133344566
Q ss_pred HhhhccCCCCcEE
Q 018437 230 KKNEETGWDTPIH 242 (356)
Q Consensus 230 ~~~~~~~~~~~l~ 242 (356)
+. |+.+.
T Consensus 244 ~~------g~~v~ 250 (284)
T 2prs_A 244 GT------SVRMG 250 (284)
T ss_dssp TS------CCEEE
T ss_pred Hc------CCeEE
Confidence 66 76553
No 299
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=20.15 E-value=44 Score=31.29 Aligned_cols=30 Identities=20% Similarity=0.224 Sum_probs=25.4
Q ss_pred CCcccccCCHHHHHHHHHHhhhccCCCCcEEEeccc
Q 018437 212 STLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAAS 247 (356)
Q Consensus 212 ~~~tG~~~~i~~I~~i~~~~~~~~~~~~~l~vD~a~ 247 (356)
+...|+.++++++++.|+++ |+.+++|.+.
T Consensus 77 ~~~~Gt~~~~~~lv~~~h~~------Gi~vi~D~V~ 106 (449)
T 3dhu_A 77 NPEYGTLADFKALTDRAHEL------GMKVMLDIVY 106 (449)
T ss_dssp CGGGCCHHHHHHHHHHHHHT------TCEEEEEECC
T ss_pred CcccCCHHHHHHHHHHHHHC------CCEEEEEEcc
Confidence 34567888999999999999 9999999875
No 300
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=20.09 E-value=1.6e+02 Score=24.63 Aligned_cols=53 Identities=11% Similarity=0.139 Sum_probs=36.6
Q ss_pred hhCCeeEEEEecCCccccCHHHHHHHHhh-CceEEEEecCCCcccccCCHHHHHHHHHHh
Q 018437 173 YFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (356)
Q Consensus 173 ~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~~~~v~~~~~~~~tG~~~~i~~I~~i~~~~ 231 (356)
+.++.+..+|+.. .+.+++++..+++.. +++.++.++=.+ .+.+++.+.+++.
T Consensus 172 l~~~Dv~il~~~~-~~h~~~~ea~~~~~~l~~k~vip~H~~~-----~~~~~~~~~l~~~ 225 (235)
T 3kl7_A 172 LKDIDIAFLPVNQ-PYTMTVSQAAKAARMFSPKILYPYHYGD-----TKIGELKDALKDS 225 (235)
T ss_dssp CCSCSEEEEECCT-TTSCCHHHHHHHHHHHCCSEEEEESCTT-----CCTTHHHHHTTTS
T ss_pred hcCCCEEEECCCC-CcccCHHHHHHHHHHcCCCEEEEEcCCC-----CCHHHHHHHHhhC
Confidence 3467788888875 378898776666653 566777666655 5677777776655
Done!