Query 018443
Match_columns 356
No_of_seqs 203 out of 1256
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 15:21:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018443.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018443hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dpp_A DHDPS 2, dihydrodipicol 100.0 2.5E-86 8.7E-91 645.9 33.6 332 25-356 29-360 (360)
2 3si9_A DHDPS, dihydrodipicolin 100.0 1.7E-69 5.9E-74 521.9 34.5 297 35-334 4-313 (315)
3 3qze_A DHDPS, dihydrodipicolin 100.0 3.2E-69 1.1E-73 520.0 33.1 280 54-334 22-313 (314)
4 3flu_A DHDPS, dihydrodipicolin 100.0 5E-69 1.7E-73 515.1 34.1 278 55-333 7-296 (297)
5 3na8_A Putative dihydrodipicol 100.0 3.1E-69 1.1E-73 520.2 32.5 278 55-333 24-314 (315)
6 1xky_A Dihydrodipicolinate syn 100.0 6.3E-69 2.1E-73 515.3 34.1 278 54-332 11-300 (301)
7 3eb2_A Putative dihydrodipicol 100.0 3.9E-69 1.3E-73 516.5 31.0 277 55-332 4-292 (300)
8 3s5o_A 4-hydroxy-2-oxoglutarat 100.0 6.6E-69 2.3E-73 516.4 32.4 282 51-333 10-306 (307)
9 3tak_A DHDPS, dihydrodipicolin 100.0 5.6E-69 1.9E-73 513.4 31.6 277 56-333 2-290 (291)
10 3cpr_A Dihydrodipicolinate syn 100.0 1.3E-68 4.4E-73 513.8 33.7 280 49-333 12-303 (304)
11 3m5v_A DHDPS, dihydrodipicolin 100.0 6.8E-69 2.3E-73 515.1 31.8 277 55-334 8-299 (301)
12 3h5d_A DHDPS, dihydrodipicolin 100.0 8.4E-69 2.9E-73 516.4 31.8 283 52-336 4-299 (311)
13 3l21_A DHDPS, dihydrodipicolin 100.0 5.3E-69 1.8E-73 516.4 30.3 279 55-334 15-303 (304)
14 2ojp_A DHDPS, dihydrodipicolin 100.0 1.1E-68 3.8E-73 511.6 31.4 277 56-333 2-291 (292)
15 2rfg_A Dihydrodipicolinate syn 100.0 2E-68 6.9E-73 510.8 32.7 278 56-335 2-291 (297)
16 3a5f_A Dihydrodipicolinate syn 100.0 1.6E-68 5.6E-73 510.2 31.8 276 56-333 3-290 (291)
17 2ehh_A DHDPS, dihydrodipicolin 100.0 2.9E-68 9.9E-73 509.1 33.3 277 56-334 2-291 (294)
18 1f6k_A N-acetylneuraminate lya 100.0 4.6E-68 1.6E-72 507.5 32.9 276 55-331 3-291 (293)
19 2yxg_A DHDPS, dihydrodipicolin 100.0 6.8E-68 2.3E-72 505.5 32.9 274 56-333 2-288 (289)
20 1o5k_A DHDPS, dihydrodipicolin 100.0 7.5E-68 2.6E-72 508.9 31.8 276 56-333 14-305 (306)
21 2vc6_A MOSA, dihydrodipicolina 100.0 1E-67 3.4E-72 505.0 32.3 276 56-333 2-290 (292)
22 3daq_A DHDPS, dihydrodipicolin 100.0 7.6E-68 2.6E-72 505.8 31.5 276 56-333 4-290 (292)
23 2r8w_A AGR_C_1641P; APC7498, d 100.0 1.6E-67 5.6E-72 511.5 31.8 278 56-334 35-328 (332)
24 2wkj_A N-acetylneuraminate lya 100.0 1.7E-67 5.9E-72 505.7 31.3 276 55-332 11-300 (303)
25 2v9d_A YAGE; dihydrodipicolini 100.0 2E-67 7E-72 512.8 31.9 277 56-333 32-326 (343)
26 3b4u_A Dihydrodipicolinate syn 100.0 1E-65 3.5E-70 491.5 29.5 271 57-332 5-289 (294)
27 3d0c_A Dihydrodipicolinate syn 100.0 3.2E-65 1.1E-69 492.2 32.5 276 54-335 10-304 (314)
28 3fkr_A L-2-keto-3-deoxyarabona 100.0 9.5E-65 3.2E-69 487.8 33.1 275 55-333 8-302 (309)
29 1w3i_A EDA, 2-keto-3-deoxy glu 100.0 8.2E-65 2.8E-69 485.0 31.6 268 57-332 1-282 (293)
30 3qfe_A Putative dihydrodipicol 100.0 8.8E-65 3E-69 489.8 32.0 277 54-333 9-312 (318)
31 2pcq_A Putative dihydrodipicol 100.0 1.5E-65 5.3E-70 487.8 24.0 267 59-333 2-281 (283)
32 2r91_A 2-keto-3-deoxy-(6-phosp 100.0 1.3E-64 4.4E-69 482.2 30.1 266 57-331 1-280 (286)
33 2hmc_A AGR_L_411P, dihydrodipi 100.0 1.1E-64 3.6E-69 493.4 30.0 271 55-332 26-323 (344)
34 3e96_A Dihydrodipicolinate syn 100.0 3.2E-64 1.1E-68 485.6 33.0 276 55-335 11-304 (316)
35 3dz1_A Dihydrodipicolinate syn 100.0 4.1E-64 1.4E-68 484.3 32.8 276 55-334 8-305 (313)
36 2nuw_A 2-keto-3-deoxygluconate 100.0 5.1E-64 1.7E-68 478.5 30.4 266 57-332 1-280 (288)
37 4dnh_A Uncharacterized protein 98.0 0.00047 1.6E-08 65.1 19.0 218 71-290 57-319 (396)
38 3ih1_A Methylisocitrate lyase; 97.7 0.0021 7.2E-08 60.9 17.5 131 59-203 92-235 (305)
39 3eoo_A Methylisocitrate lyase; 97.6 0.0036 1.2E-07 59.1 18.0 105 74-184 96-212 (298)
40 2qjg_A Putative aldolase MJ040 97.5 7E-05 2.4E-09 69.4 5.2 180 59-255 24-238 (273)
41 3lye_A Oxaloacetate acetyl hyd 97.5 0.0057 2E-07 57.9 18.0 124 74-203 101-239 (307)
42 3fa4_A 2,3-dimethylmalate lyas 97.5 0.0058 2E-07 57.8 17.7 124 74-203 93-231 (302)
43 1f8m_A Isocitrate lyase, ICL; 97.4 0.0076 2.6E-07 59.4 17.4 125 74-202 161-332 (429)
44 3lg3_A Isocitrate lyase; conse 97.3 0.0073 2.5E-07 59.5 16.7 123 74-200 165-334 (435)
45 3i4e_A Isocitrate lyase; struc 97.3 0.011 3.6E-07 58.5 17.1 123 74-200 165-334 (439)
46 1zlp_A PSR132, petal death pro 97.2 0.012 4.1E-07 56.0 16.4 123 74-203 114-249 (318)
47 1s2w_A Phosphoenolpyruvate pho 97.1 0.025 8.5E-07 53.3 17.5 134 59-203 82-230 (295)
48 3eol_A Isocitrate lyase; seatt 97.1 0.01 3.5E-07 58.5 15.3 112 74-189 158-317 (433)
49 2ze3_A DFA0005; organic waste 96.9 0.028 9.6E-07 52.4 15.6 120 74-203 90-224 (275)
50 2hjp_A Phosphonopyruvate hydro 96.9 0.011 3.9E-07 55.5 12.9 132 74-215 88-235 (290)
51 1xg4_A Probable methylisocitra 96.9 0.037 1.3E-06 52.0 16.3 105 74-184 92-208 (295)
52 2qiw_A PEP phosphonomutase; st 96.7 0.017 5.9E-07 53.2 12.4 118 79-204 96-229 (255)
53 2ekc_A AQ_1548, tryptophan syn 96.6 0.23 7.7E-06 45.6 19.5 182 58-256 17-236 (262)
54 3b8i_A PA4872 oxaloacetate dec 96.5 0.028 9.6E-07 52.7 12.5 120 74-203 95-226 (287)
55 1qop_A Tryptophan synthase alp 96.2 0.28 9.5E-06 45.1 17.5 184 58-256 17-236 (268)
56 1w8s_A FBP aldolase, fructose- 95.7 0.17 5.9E-06 46.5 13.6 161 74-254 39-231 (263)
57 1jub_A Dihydroorotate dehydrog 95.7 0.033 1.1E-06 52.3 8.8 86 73-162 169-276 (311)
58 3i65_A Dihydroorotate dehydrog 95.6 0.051 1.8E-06 53.5 10.2 85 73-161 280-378 (415)
59 1tv5_A Dhodehase, dihydroorota 95.6 0.068 2.3E-06 53.1 11.1 85 73-161 308-406 (443)
60 1rd5_A Tryptophan synthase alp 95.6 0.15 5.2E-06 46.5 12.8 173 70-256 26-232 (262)
61 1f76_A Dihydroorotate dehydrog 95.5 0.076 2.6E-06 50.4 10.7 85 73-161 222-322 (336)
62 2ftp_A Hydroxymethylglutaryl-C 95.5 0.076 2.6E-06 49.9 10.5 105 80-185 87-209 (302)
63 3hgj_A Chromate reductase; TIM 95.4 0.35 1.2E-05 46.2 15.1 128 72-205 141-308 (349)
64 3zwt_A Dihydroorotate dehydrog 95.2 0.082 2.8E-06 51.2 10.0 84 73-160 231-330 (367)
65 1o66_A 3-methyl-2-oxobutanoate 95.2 0.071 2.4E-06 49.6 9.1 125 63-209 83-229 (275)
66 1m3u_A 3-methyl-2-oxobutanoate 95.0 0.072 2.5E-06 49.2 8.4 125 62-209 82-229 (264)
67 1ydn_A Hydroxymethylglutaryl-C 94.7 0.21 7.1E-06 46.5 11.0 106 79-185 82-205 (295)
68 3vnd_A TSA, tryptophan synthas 94.7 1.1 3.7E-05 41.4 15.6 173 70-256 26-237 (267)
69 1to3_A Putative aldolase YIHT; 94.7 0.34 1.2E-05 45.5 12.4 167 75-255 47-255 (304)
70 2nzl_A Hydroxyacid oxidase 1; 94.7 0.059 2E-06 52.7 7.3 94 81-179 265-361 (392)
71 2nli_A Lactate oxidase; flavoe 94.6 0.052 1.8E-06 52.6 6.8 95 80-179 241-338 (368)
72 1jub_A Dihydroorotate dehydrog 94.5 0.18 6.2E-06 47.1 10.0 84 73-158 103-193 (311)
73 2e6f_A Dihydroorotate dehydrog 94.4 0.11 3.9E-06 48.6 8.4 85 73-162 171-278 (314)
74 1vyr_A Pentaerythritol tetrani 94.3 0.52 1.8E-05 45.4 13.1 122 76-207 161-315 (364)
75 2cw6_A Hydroxymethylglutaryl-C 94.3 0.3 1E-05 45.6 11.0 100 80-180 84-198 (298)
76 3sgz_A Hydroxyacid oxidase 2; 94.3 0.064 2.2E-06 51.7 6.4 95 80-179 229-326 (352)
77 2r14_A Morphinone reductase; H 94.3 0.32 1.1E-05 47.2 11.5 123 76-207 166-320 (377)
78 1ub3_A Aldolase protein; schif 94.2 1.1 3.8E-05 40.1 14.0 125 59-184 55-181 (220)
79 1z41_A YQJM, probable NADH-dep 94.2 0.9 3.1E-05 43.1 14.3 123 76-206 144-298 (338)
80 3nav_A Tryptophan synthase alp 94.1 0.85 2.9E-05 42.2 13.5 173 70-256 28-239 (271)
81 1p0k_A Isopentenyl-diphosphate 94.1 0.1 3.5E-06 49.9 7.4 92 80-179 193-305 (349)
82 1wa3_A 2-keto-3-deoxy-6-phosph 94.0 1.4 4.7E-05 38.2 14.2 156 73-258 19-182 (205)
83 1oy0_A Ketopantoate hydroxymet 93.9 0.14 4.9E-06 47.6 7.7 127 61-209 98-247 (281)
84 3l5l_A Xenobiotic reductase A; 93.7 0.58 2E-05 45.0 12.0 127 72-205 147-315 (363)
85 3ewb_X 2-isopropylmalate synth 93.6 0.5 1.7E-05 44.1 11.1 103 77-180 81-192 (293)
86 3irs_A Uncharacterized protein 93.5 0.54 1.9E-05 43.3 11.1 130 78-212 49-187 (291)
87 1to3_A Putative aldolase YIHT; 93.5 0.49 1.7E-05 44.5 10.9 100 80-181 112-223 (304)
88 1ps9_A 2,4-dienoyl-COA reducta 93.4 1.1 3.9E-05 46.2 14.5 125 76-206 141-301 (671)
89 1ujp_A Tryptophan synthase alp 93.4 1.3 4.4E-05 40.9 13.4 179 57-256 15-231 (271)
90 1ydo_A HMG-COA lyase; TIM-barr 93.3 0.47 1.6E-05 44.6 10.4 99 81-180 86-199 (307)
91 1nvm_A HOA, 4-hydroxy-2-oxoval 93.2 0.35 1.2E-05 46.1 9.6 101 71-175 144-248 (345)
92 1jcn_A Inosine monophosphate d 93.2 0.88 3E-05 45.7 12.9 95 78-184 256-363 (514)
93 4e38_A Keto-hydroxyglutarate-a 93.1 2.1 7.2E-05 38.6 14.0 186 56-284 33-228 (232)
94 2gou_A Oxidoreductase, FMN-bin 93.1 1.3 4.6E-05 42.5 13.5 120 76-207 161-314 (365)
95 3gr7_A NADPH dehydrogenase; fl 93.0 1.3 4.5E-05 42.1 13.2 125 73-206 134-298 (340)
96 1wv2_A Thiazole moeity, thiazo 93.0 0.33 1.1E-05 44.6 8.4 90 80-178 147-237 (265)
97 3apt_A Methylenetetrahydrofola 93.0 3.9 0.00013 38.4 16.2 111 73-189 83-211 (310)
98 2bdq_A Copper homeostasis prot 92.9 0.56 1.9E-05 42.2 9.7 91 56-158 90-208 (224)
99 2qjg_A Putative aldolase MJ040 92.9 0.62 2.1E-05 42.4 10.4 94 73-178 163-258 (273)
100 1ka9_F Imidazole glycerol phos 92.9 0.32 1.1E-05 43.7 8.3 86 79-174 155-243 (252)
101 2e6f_A Dihydroorotate dehydrog 92.9 0.3 1E-05 45.7 8.3 84 73-158 103-196 (314)
102 3rmj_A 2-isopropylmalate synth 92.8 0.96 3.3E-05 43.7 12.0 45 76-120 87-136 (370)
103 3gka_A N-ethylmaleimide reduct 92.7 2.6 8.8E-05 40.5 14.8 121 76-212 161-315 (361)
104 1gox_A (S)-2-hydroxy-acid oxid 92.7 0.18 6.1E-06 48.8 6.6 94 80-178 237-333 (370)
105 1y0e_A Putative N-acetylmannos 92.5 1.7 5.7E-05 38.1 12.3 110 79-205 78-195 (223)
106 3iwp_A Copper homeostasis prot 92.4 0.38 1.3E-05 44.9 8.2 88 56-157 125-238 (287)
107 3lab_A Putative KDPG (2-keto-3 92.4 1.3 4.5E-05 39.6 11.4 179 56-275 12-204 (217)
108 1vrd_A Inosine-5'-monophosphat 92.3 0.95 3.2E-05 45.1 11.7 71 76-157 236-306 (494)
109 1o66_A 3-methyl-2-oxobutanoate 92.3 0.85 2.9E-05 42.3 10.4 102 123-232 16-135 (275)
110 3khj_A Inosine-5-monophosphate 92.3 5.3 0.00018 38.3 16.5 169 61-259 47-241 (361)
111 2w6r_A Imidazole glycerol phos 92.1 0.43 1.5E-05 43.2 8.2 85 79-173 159-246 (266)
112 3sr7_A Isopentenyl-diphosphate 92.1 0.3 1E-05 47.2 7.3 92 80-179 221-332 (365)
113 1mzh_A Deoxyribose-phosphate a 92.1 2.4 8.3E-05 37.7 13.0 82 75-157 69-152 (225)
114 2cw6_A Hydroxymethylglutaryl-C 92.1 1.4 4.9E-05 40.9 11.9 101 70-175 150-260 (298)
115 3ble_A Citramalate synthase fr 92.0 0.67 2.3E-05 44.1 9.6 99 81-180 101-211 (337)
116 3q58_A N-acetylmannosamine-6-p 91.9 6.5 0.00022 35.0 15.6 165 74-265 34-221 (229)
117 1thf_D HISF protein; thermophI 91.8 0.47 1.6E-05 42.6 8.0 87 78-174 153-242 (253)
118 3vkj_A Isopentenyl-diphosphate 91.8 0.26 8.8E-06 47.7 6.5 93 80-179 202-320 (368)
119 3vzx_A Heptaprenylglyceryl pho 91.7 4.7 0.00016 36.2 14.4 179 65-268 11-223 (228)
120 3glc_A Aldolase LSRF; TIM barr 91.7 1.5 5.2E-05 41.0 11.5 108 57-178 170-278 (295)
121 1kbi_A Cytochrome B2, L-LCR; f 91.7 0.29 9.8E-06 49.4 7.0 94 80-178 355-456 (511)
122 2hsa_B 12-oxophytodienoate red 91.7 4.1 0.00014 39.6 15.1 122 76-206 171-339 (402)
123 1ypf_A GMP reductase; GUAC, pu 91.6 0.41 1.4E-05 45.5 7.7 74 80-162 161-244 (336)
124 1vcf_A Isopentenyl-diphosphate 91.6 0.93 3.2E-05 42.8 10.1 90 82-179 198-309 (332)
125 1m3u_A 3-methyl-2-oxobutanoate 91.6 1 3.5E-05 41.5 10.0 101 123-232 16-134 (264)
126 1eye_A DHPS 1, dihydropteroate 91.6 0.79 2.7E-05 42.6 9.3 119 55-187 7-132 (280)
127 3b0p_A TRNA-dihydrouridine syn 91.5 0.95 3.2E-05 43.2 10.2 84 73-163 141-231 (350)
128 3kdn_A Rubisco, ribulose bisph 91.3 2.9 9.8E-05 41.3 13.5 95 59-157 157-255 (444)
129 4ab4_A Xenobiotic reductase B; 91.3 4.7 0.00016 38.6 14.8 124 73-212 143-307 (362)
130 2nli_A Lactate oxidase; flavoe 91.3 0.69 2.4E-05 44.6 8.9 73 74-158 144-258 (368)
131 3r2g_A Inosine 5'-monophosphat 91.3 0.73 2.5E-05 44.4 9.1 70 76-157 99-169 (361)
132 1eep_A Inosine 5'-monophosphat 91.2 0.98 3.4E-05 43.9 10.1 67 79-156 155-221 (404)
133 1w8s_A FBP aldolase, fructose- 91.2 1 3.6E-05 41.2 9.7 94 74-178 157-252 (263)
134 1qwg_A PSL synthase;, (2R)-pho 91.0 1.6 5.6E-05 39.8 10.5 76 77-158 86-169 (251)
135 2hbv_A 2-amino-3-carboxymucona 90.9 1.4 4.8E-05 41.1 10.6 109 79-187 61-179 (334)
136 1vcv_A Probable deoxyribose-ph 90.9 4.9 0.00017 36.0 13.6 102 58-161 50-152 (226)
137 3b0p_A TRNA-dihydrouridine syn 90.9 1.3 4.5E-05 42.2 10.5 84 74-159 68-166 (350)
138 4fo4_A Inosine 5'-monophosphat 90.8 0.63 2.2E-05 44.9 8.1 68 78-156 109-176 (366)
139 1h5y_A HISF; histidine biosynt 90.8 0.78 2.7E-05 40.6 8.3 87 79-175 157-246 (253)
140 2ftp_A Hydroxymethylglutaryl-C 90.5 0.7 2.4E-05 43.2 7.9 101 70-175 153-263 (302)
141 3aty_A Tcoye, prostaglandin F2 90.4 3.6 0.00012 39.7 13.2 125 76-212 174-335 (379)
142 1wdd_A Ribulose bisphosphate c 90.3 3.9 0.00013 40.7 13.5 94 63-157 170-268 (477)
143 1ydo_A HMG-COA lyase; TIM-barr 90.2 0.52 1.8E-05 44.3 6.9 101 70-175 151-261 (307)
144 1aj0_A DHPS, dihydropteroate s 90.2 0.96 3.3E-05 42.1 8.6 118 55-187 16-141 (282)
145 3ngj_A Deoxyribose-phosphate a 90.2 7.8 0.00027 35.0 14.4 114 58-172 78-193 (239)
146 1f76_A Dihydroorotate dehydrog 90.2 2.1 7.1E-05 40.3 11.1 84 75-159 152-247 (336)
147 1bwv_A Rubisco, protein (ribul 89.9 4.1 0.00014 40.7 13.3 94 63-157 179-277 (493)
148 1oy0_A Ketopantoate hydroxymet 89.9 0.83 2.8E-05 42.5 7.8 101 123-230 33-151 (281)
149 2f6k_A Metal-dependent hydrola 89.9 2.6 8.8E-05 38.3 11.2 109 78-187 37-156 (307)
150 1icp_A OPR1, 12-oxophytodienoa 89.8 2.1 7.2E-05 41.3 11.0 123 76-206 167-321 (376)
151 3p6l_A Sugar phosphate isomera 89.8 8.4 0.00029 34.0 14.4 129 77-214 23-164 (262)
152 3nwr_A A rubisco-like protein; 89.7 4.1 0.00014 40.1 13.0 95 59-157 163-261 (432)
153 4f0h_A Ribulose bisphosphate c 89.7 3.6 0.00012 41.1 12.7 96 59-157 178-277 (493)
154 3khj_A Inosine-5-monophosphate 89.7 0.99 3.4E-05 43.4 8.4 66 79-156 107-172 (361)
155 3vnd_A TSA, tryptophan synthas 89.5 2.7 9.2E-05 38.7 10.9 19 77-95 111-129 (267)
156 3r2g_A Inosine 5'-monophosphat 89.4 15 0.00053 35.1 16.7 169 60-261 43-235 (361)
157 2dvt_A Thermophilic reversible 89.3 2.3 7.9E-05 39.0 10.5 107 79-186 41-165 (327)
158 2ekc_A AQ_1548, tryptophan syn 89.2 7.8 0.00027 35.1 13.8 111 77-206 110-227 (262)
159 1u83_A Phosphosulfolactate syn 89.1 2 6.8E-05 39.7 9.6 75 77-158 111-193 (276)
160 3tha_A Tryptophan synthase alp 89.1 13 0.00044 33.8 16.2 176 66-256 18-229 (252)
161 4avf_A Inosine-5'-monophosphat 89.1 2.1 7.2E-05 42.8 10.7 68 78-156 230-297 (490)
162 3eeg_A 2-isopropylmalate synth 89.1 0.84 2.9E-05 43.3 7.3 61 139-202 124-184 (325)
163 2y5s_A DHPS, dihydropteroate s 89.0 1.6 5.5E-05 40.8 9.1 97 55-157 24-124 (294)
164 3qfw_A Ribulose-1,5-bisphospha 89.0 4.1 0.00014 39.4 12.1 156 29-196 95-264 (378)
165 3vav_A 3-methyl-2-oxobutanoate 89.0 2.8 9.6E-05 38.8 10.6 101 123-232 28-146 (275)
166 2d69_A Ribulose bisphosphate c 88.9 4.3 0.00015 39.9 12.5 111 63-175 155-270 (430)
167 4ay7_A Methylcobalamin\: coenz 88.9 3.9 0.00013 38.6 12.0 123 109-236 132-293 (348)
168 3ewb_X 2-isopropylmalate synth 88.6 1.3 4.3E-05 41.4 8.2 102 70-175 144-251 (293)
169 3vav_A 3-methyl-2-oxobutanoate 88.6 4.8 0.00016 37.2 11.9 120 48-185 15-148 (275)
170 4ef8_A Dihydroorotate dehydrog 88.6 1.2 4.1E-05 42.7 8.1 85 73-162 204-311 (354)
171 3r12_A Deoxyribose-phosphate a 88.5 11 0.00037 34.5 14.1 163 72-254 55-247 (260)
172 3oa3_A Aldolase; structural ge 88.5 4.1 0.00014 37.9 11.4 98 59-157 110-208 (288)
173 2oem_A 2,3-diketo-5-methylthio 88.3 4.9 0.00017 39.3 12.4 92 64-157 143-239 (413)
174 3kru_A NADH:flavin oxidoreduct 88.3 7 0.00024 37.1 13.3 126 72-205 132-297 (343)
175 1h5y_A HISF; histidine biosynt 88.3 2.4 8.3E-05 37.3 9.5 77 77-161 34-110 (253)
176 3f4w_A Putative hexulose 6 pho 88.2 0.99 3.4E-05 39.3 6.8 104 80-205 68-178 (211)
177 2rdx_A Mandelate racemase/muco 88.2 10 0.00035 36.1 14.6 122 73-216 144-270 (379)
178 2wm1_A 2-amino-3-carboxymucona 88.0 2.9 0.0001 38.8 10.4 108 79-187 57-176 (336)
179 2q02_A Putative cytoplasmic pr 88.0 11 0.00037 33.2 13.9 130 78-210 21-166 (272)
180 2zvi_A 2,3-diketo-5-methylthio 88.0 5.5 0.00019 39.1 12.5 93 64-158 157-254 (425)
181 3nav_A Tryptophan synthase alp 87.9 4.3 0.00015 37.4 11.2 19 77-95 113-131 (271)
182 1qo2_A Molecule: N-((5-phospho 87.7 1.1 3.8E-05 40.0 6.9 89 79-173 147-240 (241)
183 3fk4_A Rubisco-like protein; s 87.6 5.7 0.0002 38.8 12.4 95 59-157 142-240 (414)
184 1mzh_A Deoxyribose-phosphate a 87.6 3.8 0.00013 36.4 10.4 75 73-157 129-204 (225)
185 3ij6_A Uncharacterized metal-d 87.6 1.5 5E-05 41.0 8.0 108 79-186 44-162 (312)
186 1xm3_A Thiazole biosynthesis p 87.6 8.8 0.0003 34.9 13.1 166 73-256 23-209 (264)
187 1ykw_A Rubisco-like protein; b 87.6 4.7 0.00016 39.7 11.7 92 64-157 168-264 (435)
188 2qyg_A Ribulose bisphosphate c 87.5 4 0.00014 40.4 11.3 94 59-157 186-284 (452)
189 3usb_A Inosine-5'-monophosphat 87.5 4.2 0.00014 40.8 11.7 67 79-156 258-324 (511)
190 2gjl_A Hypothetical protein PA 87.5 2.8 9.6E-05 39.3 9.9 102 78-205 85-192 (328)
191 1geq_A Tryptophan synthase alp 87.4 15 0.0005 32.5 17.3 175 70-257 13-223 (248)
192 2nx9_A Oxaloacetate decarboxyl 87.4 8.5 0.00029 38.2 13.7 106 74-186 98-208 (464)
193 3tha_A Tryptophan synthase alp 87.4 2.7 9.3E-05 38.4 9.3 36 77-119 104-139 (252)
194 3bld_A Queuine tRNA-ribosyltra 87.3 1.7 5.8E-05 42.2 8.4 81 70-160 203-285 (386)
195 4exq_A UPD, URO-D, uroporphyri 87.3 3.9 0.00013 39.2 10.9 70 80-156 201-279 (368)
196 4fxs_A Inosine-5'-monophosphat 87.3 4.5 0.00016 40.4 11.8 68 79-157 233-300 (496)
197 1nvm_A HOA, 4-hydroxy-2-oxoval 87.2 3.6 0.00012 39.0 10.6 93 79-180 96-191 (345)
198 1ep3_A Dihydroorotate dehydrog 87.2 1.1 3.8E-05 41.4 6.8 83 74-159 109-198 (311)
199 3cwo_X Beta/alpha-barrel prote 87.2 2.6 8.9E-05 36.3 8.9 88 77-174 131-221 (237)
200 2ash_A Queuine tRNA-ribosyltra 87.0 2 6.9E-05 41.6 8.6 80 70-159 196-277 (381)
201 1vhc_A Putative KHG/KDPG aldol 87.0 1.5 5.3E-05 39.2 7.4 103 80-212 80-183 (224)
202 1ydn_A Hydroxymethylglutaryl-C 86.7 1.2 4.1E-05 41.3 6.7 114 56-174 131-258 (295)
203 3m47_A Orotidine 5'-phosphate 86.7 1.6 5.3E-05 39.2 7.3 98 61-175 120-220 (228)
204 3eeg_A 2-isopropylmalate synth 86.6 2 6.9E-05 40.6 8.3 114 56-175 133-252 (325)
205 3l5a_A NADH/flavin oxidoreduct 86.6 9.2 0.00031 37.3 13.3 128 72-205 159-338 (419)
206 1xm3_A Thiazole biosynthesis p 86.5 1.7 5.9E-05 39.7 7.6 87 82-177 140-228 (264)
207 2z6i_A Trans-2-enoyl-ACP reduc 86.5 1.3 4.4E-05 41.8 6.9 102 78-205 77-182 (332)
208 3ivs_A Homocitrate synthase, m 86.4 3.8 0.00013 40.2 10.4 97 82-179 116-221 (423)
209 3igs_A N-acetylmannosamine-6-p 86.4 17 0.00059 32.3 17.2 180 57-264 18-220 (232)
210 2pgw_A Muconate cycloisomerase 86.3 23 0.00079 33.6 16.5 124 73-216 146-274 (384)
211 2c6q_A GMP reductase 2; TIM ba 86.3 2.4 8.2E-05 40.5 8.8 74 80-162 173-257 (351)
212 3b8i_A PA4872 oxaloacetate dec 86.1 5.1 0.00017 37.2 10.6 151 105-269 4-202 (287)
213 3w01_A Heptaprenylglyceryl pho 85.9 1.6 5.4E-05 39.5 6.8 73 64-157 15-87 (235)
214 2htm_A Thiazole biosynthesis p 85.9 2.2 7.5E-05 39.3 7.8 90 80-177 136-227 (268)
215 2nzl_A Hydroxyacid oxidase 1; 85.7 5.3 0.00018 38.7 11.0 24 73-96 157-180 (392)
216 2ovl_A Putative racemase; stru 85.7 14 0.00048 35.0 13.9 145 73-235 145-300 (371)
217 4fo4_A Inosine 5'-monophosphat 85.5 11 0.00039 36.0 13.1 159 80-260 61-246 (366)
218 1thf_D HISF protein; thermophI 85.5 3.5 0.00012 36.7 9.0 75 78-160 32-106 (253)
219 3vni_A Xylose isomerase domain 85.3 20 0.00068 32.0 15.2 133 77-214 18-184 (294)
220 3sgz_A Hydroxyacid oxidase 2; 85.2 4.9 0.00017 38.4 10.3 74 74-159 133-247 (352)
221 3fst_A 5,10-methylenetetrahydr 85.1 24 0.00083 32.8 17.8 121 73-204 94-240 (304)
222 2qgy_A Enolase from the enviro 85.0 26 0.0009 33.4 15.6 125 73-216 148-278 (391)
223 3rmj_A 2-isopropylmalate synth 85.0 3.3 0.00011 39.9 9.1 100 70-173 151-256 (370)
224 2f6u_A GGGPS, (S)-3-O-geranylg 85.0 4.6 0.00016 36.4 9.5 70 66-157 14-84 (234)
225 1tx2_A DHPS, dihydropteroate s 84.8 2.1 7.2E-05 40.0 7.4 118 56-187 42-167 (297)
226 3bo9_A Putative nitroalkan dio 84.8 3.9 0.00014 38.4 9.4 102 78-205 91-196 (326)
227 3tsm_A IGPS, indole-3-glycerol 84.8 24 0.00081 32.4 19.1 157 79-258 82-253 (272)
228 2x7v_A Probable endonuclease 4 84.7 18 0.00062 32.0 13.6 127 78-205 14-165 (287)
229 2a5h_A L-lysine 2,3-aminomutas 84.5 29 0.001 33.5 15.8 119 71-192 143-297 (416)
230 3sr7_A Isopentenyl-diphosphate 84.5 3.2 0.00011 40.0 8.7 131 61-205 88-228 (365)
231 3iix_A Biotin synthetase, puta 84.4 18 0.0006 33.6 13.8 99 72-179 83-190 (348)
232 3ih1_A Methylisocitrate lyase; 84.3 18 0.00063 33.7 13.6 117 57-185 27-163 (305)
233 2qiw_A PEP phosphonomutase; st 84.2 2.9 9.9E-05 38.2 7.9 99 108-217 6-115 (255)
234 3ndo_A Deoxyribose-phosphate a 84.2 14 0.00049 33.1 12.4 102 58-160 63-169 (231)
235 1gte_A Dihydropyrimidine dehyd 84.1 3.5 0.00012 44.9 9.8 83 73-158 645-736 (1025)
236 2y88_A Phosphoribosyl isomeras 84.1 3.6 0.00012 36.4 8.4 71 78-158 33-104 (244)
237 2og9_A Mandelate racemase/muco 84.0 25 0.00085 33.6 15.0 145 73-235 161-316 (393)
238 1ep3_A Dihydroorotate dehydrog 84.0 3.5 0.00012 38.0 8.5 81 78-164 178-277 (311)
239 1twd_A Copper homeostasis prot 83.9 1.8 6E-05 39.7 6.2 85 56-156 87-197 (256)
240 3q58_A N-acetylmannosamine-6-p 83.8 3 0.0001 37.3 7.8 106 80-206 92-202 (229)
241 3fok_A Uncharacterized protein 83.8 28 0.00097 32.5 17.0 170 75-258 70-277 (307)
242 1zfj_A Inosine monophosphate d 83.7 2.5 8.5E-05 41.9 7.8 69 78-157 234-302 (491)
243 1tqj_A Ribulose-phosphate 3-ep 83.6 3.9 0.00013 36.4 8.4 170 73-258 14-205 (230)
244 3ffs_A Inosine-5-monophosphate 83.6 2.5 8.5E-05 41.2 7.5 65 79-156 146-211 (400)
245 4exq_A UPD, URO-D, uroporphyri 83.6 5.3 0.00018 38.2 9.9 90 136-233 196-300 (368)
246 3ble_A Citramalate synthase fr 83.5 4.5 0.00015 38.3 9.2 102 70-176 163-268 (337)
247 1tv5_A Dhodehase, dihydroorota 83.3 14 0.00048 36.4 12.9 86 75-161 196-335 (443)
248 3nvt_A 3-deoxy-D-arabino-heptu 83.3 4.3 0.00015 39.4 9.0 84 124-218 142-235 (385)
249 1z41_A YQJM, probable NADH-dep 83.3 5.9 0.0002 37.4 9.9 88 71-164 224-314 (338)
250 3oix_A Putative dihydroorotate 83.1 4.9 0.00017 38.3 9.3 87 73-163 204-311 (345)
251 2oz8_A MLL7089 protein; struct 83.1 20 0.00068 34.2 13.8 143 73-234 144-296 (389)
252 1r30_A Biotin synthase; SAM ra 83.0 8.4 0.00029 36.4 11.0 104 72-182 98-210 (369)
253 3ngj_A Deoxyribose-phosphate a 83.0 8.9 0.00031 34.6 10.5 162 72-253 39-230 (239)
254 4fxs_A Inosine-5'-monophosphat 82.8 6.1 0.00021 39.5 10.3 76 81-162 285-368 (496)
255 1vhn_A Putative flavin oxidore 82.8 0.81 2.8E-05 43.0 3.6 78 80-165 144-221 (318)
256 2eja_A URO-D, UPD, uroporphyri 82.7 20 0.00068 33.4 13.4 71 79-156 182-258 (338)
257 1jvn_A Glutamine, bifunctional 82.7 4.2 0.00015 41.2 9.2 87 80-173 456-543 (555)
258 1ka9_F Imidazole glycerol phos 82.7 4.1 0.00014 36.2 8.2 77 77-161 32-108 (252)
259 1xg4_A Probable methylisocitra 82.5 4.2 0.00014 37.9 8.4 112 62-185 20-155 (295)
260 2nql_A AGR_PAT_674P, isomerase 82.4 24 0.00082 33.6 14.1 125 74-217 164-293 (388)
261 1mdl_A Mandelate racemase; iso 82.4 33 0.0011 32.2 15.8 126 73-216 143-273 (359)
262 1rqb_A Transcarboxylase 5S sub 82.4 8.2 0.00028 39.0 11.0 98 72-173 171-272 (539)
263 1q7z_A 5-methyltetrahydrofolat 82.3 19 0.00064 36.6 13.8 132 59-204 101-258 (566)
264 2gl5_A Putative dehydratase pr 82.3 27 0.00091 33.5 14.5 134 70-216 146-302 (410)
265 1r3s_A URO-D, uroporphyrinogen 82.3 15 0.00051 34.8 12.5 71 79-156 200-282 (367)
266 1ypf_A GMP reductase; GUAC, pu 82.2 5.1 0.00017 37.8 9.0 67 80-158 109-178 (336)
267 1rd5_A Tryptophan synthase alp 82.1 5.7 0.00019 35.8 9.0 55 130-184 25-99 (262)
268 3gd6_A Muconate cycloisomerase 82.1 26 0.0009 33.5 14.3 144 73-235 141-296 (391)
269 2yr1_A 3-dehydroquinate dehydr 82.0 26 0.00089 31.7 13.4 104 72-188 96-209 (257)
270 4avf_A Inosine-5'-monophosphat 82.0 9.6 0.00033 37.9 11.3 75 81-161 283-365 (490)
271 1qtw_A Endonuclease IV; DNA re 82.0 26 0.00091 30.9 14.9 132 78-210 14-175 (285)
272 1i60_A IOLI protein; beta barr 81.8 22 0.00076 31.1 12.9 130 78-211 16-171 (278)
273 3tb6_A Arabinose metabolism tr 81.8 3.8 0.00013 36.4 7.7 136 73-215 55-208 (298)
274 3lmz_A Putative sugar isomeras 81.7 26 0.0009 30.7 14.6 122 77-210 31-159 (257)
275 1wbh_A KHG/KDPG aldolase; lyas 81.7 3.6 0.00012 36.4 7.3 104 80-213 79-183 (214)
276 2agk_A 1-(5-phosphoribosyl)-5- 81.7 6.9 0.00024 35.6 9.4 91 80-175 162-258 (260)
277 4hb7_A Dihydropteroate synthas 81.6 6.8 0.00023 36.1 9.3 123 55-189 8-135 (270)
278 1n7k_A Deoxyribose-phosphate a 81.6 22 0.00076 31.8 12.6 97 59-160 72-171 (234)
279 1vzw_A Phosphoribosyl isomeras 81.5 4.7 0.00016 35.7 8.1 71 78-158 34-105 (244)
280 3f4w_A Putative hexulose 6 pho 81.3 2.6 8.8E-05 36.5 6.2 89 79-176 117-206 (211)
281 1p4c_A L(+)-mandelate dehydrog 81.3 1.2 4E-05 43.1 4.2 90 80-178 237-331 (380)
282 2w6r_A Imidazole glycerol phos 81.2 3.3 0.00011 37.2 7.1 89 78-174 32-121 (266)
283 3glc_A Aldolase LSRF; TIM barr 81.1 18 0.00061 33.6 12.1 74 81-157 130-209 (295)
284 2nx9_A Oxaloacetate decarboxyl 81.1 9.3 0.00032 37.9 10.7 100 70-175 152-255 (464)
285 4e38_A Keto-hydroxyglutarate-a 81.0 6.6 0.00023 35.3 8.8 100 79-210 96-198 (232)
286 3k9c_A Transcriptional regulat 81.0 29 0.001 30.7 15.1 104 74-187 110-222 (289)
287 1kbi_A Cytochrome B2, L-LCR; f 81.0 12 0.00041 37.5 11.6 74 73-158 257-372 (511)
288 3bg3_A Pyruvate carboxylase, m 80.9 5.5 0.00019 41.7 9.4 100 71-175 256-359 (718)
289 3gyb_A Transcriptional regulat 80.9 28 0.00096 30.4 13.3 95 74-179 102-198 (280)
290 1geq_A Tryptophan synthase alp 80.8 8.8 0.0003 34.0 9.7 18 79-96 98-115 (248)
291 3o07_A Pyridoxine biosynthesis 80.7 3.9 0.00013 38.0 7.2 131 62-216 98-276 (291)
292 3tva_A Xylose isomerase domain 80.6 28 0.00094 31.0 13.2 121 80-211 25-181 (290)
293 3igs_A N-acetylmannosamine-6-p 80.5 8.1 0.00028 34.5 9.3 103 80-206 92-202 (232)
294 3bo9_A Putative nitroalkan dio 80.2 2.1 7.3E-05 40.3 5.6 112 81-204 136-255 (326)
295 1mxs_A KDPG aldolase; 2-keto-3 80.2 4.2 0.00014 36.3 7.2 101 80-212 89-192 (225)
296 2qde_A Mandelate racemase/muco 80.1 42 0.0014 32.0 15.3 125 73-216 144-273 (397)
297 2z6i_A Trans-2-enoyl-ACP reduc 80.0 4 0.00014 38.4 7.4 71 81-163 122-197 (332)
298 1rqb_A Transcarboxylase 5S sub 80.0 20 0.00069 36.2 12.9 98 75-179 116-216 (539)
299 2vp8_A Dihydropteroate synthas 79.8 2.8 9.6E-05 39.6 6.2 118 55-187 43-168 (318)
300 3ffs_A Inosine-5-monophosphate 79.7 4.6 0.00016 39.3 7.8 78 79-162 195-280 (400)
301 3ovp_A Ribulose-phosphate 3-ep 79.6 5.4 0.00018 35.6 7.8 171 71-256 12-199 (228)
302 3k30_A Histamine dehydrogenase 79.6 17 0.00059 37.4 12.7 121 76-205 156-314 (690)
303 3iv3_A Tagatose 1,6-diphosphat 79.5 24 0.00083 33.3 12.6 81 75-159 187-282 (332)
304 3ozy_A Putative mandelate race 79.5 18 0.0006 34.7 12.0 144 72-234 149-304 (389)
305 1nu5_A Chloromuconate cycloiso 79.5 42 0.0014 31.6 14.7 125 74-216 142-272 (370)
306 3l49_A ABC sugar (ribose) tran 79.1 17 0.00057 32.1 11.1 59 125-188 36-95 (291)
307 1zlp_A PSR132, petal death pro 79.0 12 0.00039 35.3 10.1 114 61-185 41-177 (318)
308 3i65_A Dihydroorotate dehydrog 78.9 6.2 0.00021 38.6 8.5 16 243-258 363-378 (415)
309 2zad_A Muconate cycloisomerase 78.6 43 0.0015 31.2 14.8 144 74-235 139-292 (345)
310 1h1y_A D-ribulose-5-phosphate 78.6 29 0.001 30.3 12.4 168 73-258 16-205 (228)
311 2ox4_A Putative mandelate race 78.6 40 0.0014 32.1 14.3 133 70-215 142-292 (403)
312 3bw2_A 2-nitropropane dioxygen 78.4 11 0.00036 35.9 10.0 104 78-206 111-229 (369)
313 3cyv_A URO-D, UPD, uroporphyri 78.4 31 0.0011 32.3 13.2 71 79-156 190-269 (354)
314 2v82_A 2-dehydro-3-deoxy-6-pho 78.4 4.9 0.00017 34.8 7.0 158 73-259 16-181 (212)
315 2vef_A Dihydropteroate synthas 78.3 4.2 0.00014 38.2 6.9 120 56-187 12-137 (314)
316 1qop_A Tryptophan synthase alp 78.3 16 0.00053 33.2 10.7 25 136-160 133-157 (268)
317 1rvk_A Isomerase/lactonizing e 78.2 46 0.0016 31.4 18.2 132 72-216 147-285 (382)
318 2hjp_A Phosphonopyruvate hydro 78.0 4.8 0.00017 37.4 7.1 84 123-217 14-112 (290)
319 3noy_A 4-hydroxy-3-methylbut-2 77.9 12 0.0004 35.9 9.7 101 64-179 84-202 (366)
320 3ve9_A Orotidine-5'-phosphate 77.8 5.9 0.0002 35.1 7.4 96 63-178 103-202 (215)
321 1ub3_A Aldolase protein; schif 77.6 12 0.00042 33.2 9.4 160 74-254 17-207 (220)
322 2ps2_A Putative mandelate race 77.5 38 0.0013 31.9 13.6 121 74-216 146-272 (371)
323 1xi3_A Thiamine phosphate pyro 77.5 6.9 0.00024 33.6 7.7 65 77-156 27-92 (215)
324 3cyv_A URO-D, UPD, uroporphyri 77.5 22 0.00075 33.3 11.8 41 139-179 189-233 (354)
325 2qr6_A IMP dehydrogenase/GMP r 77.4 6.4 0.00022 37.8 8.2 67 80-157 169-239 (393)
326 3zwt_A Dihydroorotate dehydrog 77.4 9.9 0.00034 36.4 9.4 86 74-160 162-257 (367)
327 3r12_A Deoxyribose-phosphate a 77.4 43 0.0015 30.5 13.3 89 70-158 105-194 (260)
328 2c6q_A GMP reductase 2; TIM ba 77.3 5.6 0.00019 37.9 7.6 66 81-157 122-189 (351)
329 3eoo_A Methylisocitrate lyase; 77.3 8.5 0.00029 35.9 8.6 106 62-179 25-150 (298)
330 1gox_A (S)-2-hydroxy-acid oxid 77.2 7.9 0.00027 37.0 8.7 78 74-158 134-254 (370)
331 3nur_A Amidohydrolase; TIM bar 77.2 14 0.00048 35.0 10.4 108 79-187 76-194 (357)
332 2ze3_A DFA0005; organic waste 77.1 9 0.00031 35.3 8.7 113 61-185 18-149 (275)
333 4dzi_A Putative TIM-barrel met 77.1 15 0.0005 35.8 10.7 109 78-186 103-231 (423)
334 2dqw_A Dihydropteroate synthas 77.1 2.7 9.2E-05 39.3 5.1 120 55-187 30-154 (294)
335 3tdn_A FLR symmetric alpha-bet 76.9 5.3 0.00018 35.6 7.0 74 78-161 37-112 (247)
336 3usb_A Inosine-5'-monophosphat 76.9 16 0.00055 36.5 11.1 76 82-163 311-394 (511)
337 2qr6_A IMP dehydrogenase/GMP r 76.6 4.5 0.00015 38.9 6.8 76 82-162 225-311 (393)
338 3jy6_A Transcriptional regulat 76.5 9.6 0.00033 33.6 8.6 130 74-218 48-190 (276)
339 1p1x_A Deoxyribose-phosphate a 76.5 14 0.00049 33.7 9.7 118 59-177 69-191 (260)
340 3qja_A IGPS, indole-3-glycerol 76.5 6.3 0.00022 36.2 7.4 83 84-174 177-259 (272)
341 3gbv_A Putative LACI-family tr 76.5 35 0.0012 30.0 12.5 131 73-215 53-207 (304)
342 1sfl_A 3-dehydroquinate dehydr 76.4 36 0.0012 30.3 12.4 119 59-188 62-195 (238)
343 2qdd_A Mandelate racemase/muco 76.4 36 0.0012 32.2 13.1 121 74-216 145-270 (378)
344 3oix_A Putative dihydroorotate 76.4 43 0.0015 31.7 13.4 119 80-204 63-213 (345)
345 2a4a_A Deoxyribose-phosphate a 76.3 9.5 0.00032 35.3 8.5 117 59-176 90-212 (281)
346 2tps_A Protein (thiamin phosph 76.3 4.9 0.00017 35.0 6.4 58 82-158 87-144 (227)
347 2y88_A Phosphoribosyl isomeras 76.2 3.1 0.00011 36.8 5.2 86 78-173 151-242 (244)
348 1p0k_A Isopentenyl-diphosphate 76.1 24 0.00084 33.0 11.7 76 74-158 128-210 (349)
349 4inf_A Metal-dependent hydrola 76.1 21 0.00072 34.0 11.3 106 81-186 95-211 (373)
350 2p8b_A Mandelate racemase/muco 76.0 24 0.0008 33.3 11.6 124 74-216 141-270 (369)
351 1lt8_A Betaine-homocysteine me 75.9 18 0.00061 35.2 10.8 115 58-188 116-250 (406)
352 1viz_A PCRB protein homolog; s 75.8 3.2 0.00011 37.6 5.1 69 67-157 15-84 (240)
353 3dx5_A Uncharacterized protein 75.7 11 0.00038 33.6 8.8 134 78-214 17-172 (286)
354 3iv3_A Tagatose 1,6-diphosphat 75.7 18 0.00062 34.2 10.5 126 56-185 87-251 (332)
355 3hgj_A Chromate reductase; TIM 75.6 8.1 0.00028 36.6 8.2 88 70-164 233-325 (349)
356 1y0e_A Putative N-acetylmannos 75.5 16 0.00053 31.7 9.5 75 82-162 132-209 (223)
357 2h9a_B CO dehydrogenase/acetyl 75.4 9.7 0.00033 35.7 8.5 101 76-187 74-181 (310)
358 3rot_A ABC sugar transporter, 75.3 27 0.00093 31.0 11.5 132 73-216 45-196 (297)
359 1jcn_A Inosine monophosphate d 75.2 19 0.00066 35.7 11.2 76 81-162 309-392 (514)
360 3l5a_A NADH/flavin oxidoreduct 75.2 2.5 8.4E-05 41.5 4.5 87 72-164 260-353 (419)
361 1gte_A Dihydropyrimidine dehyd 75.2 3.3 0.00011 45.1 5.9 81 77-162 716-821 (1025)
362 1tzz_A Hypothetical protein L1 75.1 55 0.0019 31.1 14.1 126 73-216 164-298 (392)
363 2gwg_A 4-oxalomesaconate hydra 75.0 12 0.00041 34.9 9.1 108 80-187 53-180 (350)
364 3jvd_A Transcriptional regulat 74.9 46 0.0016 30.3 13.1 103 74-187 158-268 (333)
365 3o1n_A 3-dehydroquinate dehydr 74.9 40 0.0014 30.8 12.5 73 73-154 116-193 (276)
366 2yxb_A Coenzyme B12-dependent 74.8 15 0.00052 30.6 8.9 86 78-177 58-143 (161)
367 3ivs_A Homocitrate synthase, m 74.7 10 0.00034 37.2 8.7 95 72-172 176-274 (423)
368 2hzg_A Mandelate racemase/muco 74.1 62 0.0021 30.8 16.2 127 74-216 145-280 (401)
369 3l6u_A ABC-type sugar transpor 74.0 20 0.00067 31.6 10.1 60 124-188 38-98 (293)
370 1f6y_A 5-methyltetrahydrofolat 73.8 52 0.0018 29.8 13.0 100 73-187 22-124 (262)
371 1tqx_A D-ribulose-5-phosphate 73.8 23 0.00078 31.5 10.2 162 72-258 14-205 (227)
372 3ajx_A 3-hexulose-6-phosphate 73.8 41 0.0014 28.5 14.5 164 73-256 10-188 (207)
373 2gjl_A Hypothetical protein PA 73.8 4 0.00014 38.2 5.4 74 81-164 130-208 (328)
374 2o56_A Putative mandelate race 73.8 63 0.0022 30.7 14.8 133 71-216 149-299 (407)
375 3qy7_A Tyrosine-protein phosph 73.6 5.2 0.00018 36.4 6.0 71 132-205 15-93 (262)
376 3h5t_A Transcriptional regulat 73.6 55 0.0019 30.0 13.6 107 74-187 173-305 (366)
377 3ksm_A ABC-type sugar transpor 73.5 19 0.00066 31.3 9.7 134 71-215 40-194 (276)
378 2bdq_A Copper homeostasis prot 73.5 8.4 0.00029 34.5 7.1 131 60-204 57-196 (224)
379 3rr1_A GALD, putative D-galact 73.4 46 0.0016 32.0 13.1 152 71-235 122-287 (405)
380 3rcy_A Mandelate racemase/muco 73.4 66 0.0023 31.2 14.4 150 73-235 145-312 (433)
381 3vkj_A Isopentenyl-diphosphate 73.2 8.3 0.00028 37.0 7.6 131 61-206 61-210 (368)
382 4ef8_A Dihydroorotate dehydrog 73.2 16 0.00054 34.9 9.5 83 74-158 137-229 (354)
383 1vhn_A Putative flavin oxidore 72.9 11 0.00038 35.0 8.3 82 74-158 69-161 (318)
384 3m9w_A D-xylose-binding peripl 72.8 21 0.00071 32.0 10.0 86 92-188 6-92 (313)
385 2d73_A Alpha-glucosidase SUSB; 72.7 15 0.0005 38.6 9.7 132 72-218 367-531 (738)
386 3gdm_A Orotidine 5'-phosphate 72.7 6.6 0.00023 36.1 6.5 98 57-173 145-251 (267)
387 1wv2_A Thiazole moeity, thiazo 72.6 57 0.002 29.7 14.2 177 75-266 29-231 (265)
388 3bw2_A 2-nitropropane dioxygen 72.4 18 0.00061 34.3 9.8 72 81-162 157-242 (369)
389 4ay7_A Methylcobalamin\: coenz 72.2 16 0.00054 34.3 9.3 73 78-156 192-268 (348)
390 3o74_A Fructose transport syst 72.1 14 0.00047 32.2 8.4 131 74-218 43-189 (272)
391 5rub_A Rubisco (ribulose-1,5-b 72.0 29 0.00099 34.6 11.3 91 65-156 187-286 (490)
392 2ztj_A Homocitrate synthase; ( 71.8 29 0.00099 33.2 11.2 95 82-178 80-184 (382)
393 3eez_A Putative mandelate race 71.3 68 0.0023 30.4 13.7 142 72-235 143-295 (378)
394 4dbe_A Orotidine 5'-phosphate 71.1 8.2 0.00028 34.3 6.6 99 62-178 109-209 (222)
395 1vzw_A Phosphoribosyl isomeras 71.1 5.1 0.00018 35.5 5.3 86 78-173 148-239 (244)
396 3aam_A Endonuclease IV, endoiv 71.0 53 0.0018 28.7 15.2 123 77-206 15-162 (270)
397 2vg3_A Undecaprenyl pyrophosph 71.0 12 0.0004 34.8 7.7 104 74-179 84-199 (284)
398 3e3m_A Transcriptional regulat 70.8 61 0.0021 29.6 13.0 81 75-157 172-257 (355)
399 3gr7_A NADPH dehydrogenase; fl 70.8 15 0.0005 34.7 8.6 88 71-164 224-314 (340)
400 3e3m_A Transcriptional regulat 70.6 28 0.00095 32.0 10.5 130 73-215 110-257 (355)
401 3l5l_A Xenobiotic reductase A; 70.5 12 0.00041 35.6 8.1 91 67-164 237-332 (363)
402 1ujp_A Tryptophan synthase alp 70.5 13 0.00045 33.9 8.0 65 123-188 14-102 (271)
403 2pp0_A L-talarate/galactarate 70.4 76 0.0026 30.2 14.9 145 73-235 174-329 (398)
404 3g1w_A Sugar ABC transporter; 70.4 33 0.0011 30.4 10.8 73 109-188 21-95 (305)
405 2zds_A Putative DNA-binding pr 70.4 38 0.0013 30.7 11.4 77 138-217 112-212 (340)
406 3stp_A Galactonate dehydratase 70.4 79 0.0027 30.4 14.0 130 74-216 179-314 (412)
407 2inf_A URO-D, UPD, uroporphyri 70.3 16 0.00053 34.5 8.8 72 78-156 195-271 (359)
408 3e61_A Putative transcriptiona 70.1 18 0.00061 31.7 8.7 123 74-215 49-184 (277)
409 3hcw_A Maltose operon transcri 70.1 58 0.002 28.8 13.0 95 74-179 115-214 (295)
410 1zfj_A Inosine monophosphate d 70.0 14 0.00049 36.3 8.7 74 83-162 289-370 (491)
411 3mqt_A Mandelate racemase/muco 69.7 77 0.0026 30.2 13.7 123 77-216 155-285 (394)
412 3h5o_A Transcriptional regulat 69.7 12 0.0004 34.3 7.6 131 73-218 102-248 (339)
413 3ugs_B Undecaprenyl pyrophosph 69.6 26 0.00088 31.3 9.4 119 72-204 33-163 (225)
414 1h1y_A D-ribulose-5-phosphate 69.5 16 0.00053 32.2 8.1 83 84-177 131-221 (228)
415 4i6k_A Amidohydrolase family p 69.3 29 0.001 31.4 10.2 123 78-217 55-182 (294)
416 1vrd_A Inosine-5'-monophosphat 69.2 28 0.00095 34.3 10.7 72 82-160 292-372 (494)
417 1zco_A 2-dehydro-3-deoxyphosph 69.2 13 0.00044 33.9 7.6 34 125-158 24-58 (262)
418 3ajx_A 3-hexulose-6-phosphate 69.2 6.4 0.00022 33.8 5.4 77 86-174 124-203 (207)
419 3kws_A Putative sugar isomeras 69.1 61 0.0021 28.6 12.6 129 77-214 39-198 (287)
420 3ru6_A Orotidine 5'-phosphate 69.0 25 0.00085 32.8 9.6 67 80-156 94-177 (303)
421 3ro6_B Putative chloromuconate 68.5 41 0.0014 31.6 11.4 125 73-216 139-269 (356)
422 2yzr_A Pyridoxal biosynthesis 68.5 12 0.00042 35.3 7.4 85 112-215 230-317 (330)
423 2qf7_A Pyruvate carboxylase pr 68.4 12 0.0004 41.5 8.3 99 71-175 704-806 (1165)
424 1eep_A Inosine 5'-monophosphat 68.3 26 0.00089 33.6 10.1 74 80-160 206-288 (404)
425 3uug_A Multiple sugar-binding 68.3 28 0.00095 31.3 9.8 87 92-189 7-94 (330)
426 2gdq_A YITF; mandelate racemas 68.2 46 0.0016 31.5 11.7 126 73-216 138-269 (382)
427 3noy_A 4-hydroxy-3-methylbut-2 68.0 31 0.0011 33.0 10.1 114 53-184 23-138 (366)
428 3ksm_A ABC-type sugar transpor 67.9 20 0.00067 31.2 8.5 72 110-188 18-93 (276)
429 4do7_A Amidohydrolase 2; enzym 67.8 8.5 0.00029 35.2 6.2 122 79-214 37-165 (303)
430 1o94_A Tmadh, trimethylamine d 67.6 60 0.002 33.6 13.3 121 76-206 149-312 (729)
431 2fvy_A D-galactose-binding per 67.6 25 0.00087 31.1 9.3 58 126-188 35-93 (309)
432 3g85_A Transcriptional regulat 67.5 63 0.0022 28.2 12.7 103 74-186 111-224 (289)
433 1j93_A UROD, uroporphyrinogen 67.4 27 0.00091 32.7 9.7 72 78-156 195-273 (353)
434 1twd_A Copper homeostasis prot 67.3 11 0.00037 34.4 6.6 130 61-204 55-188 (256)
435 3egc_A Putative ribose operon 67.3 23 0.00077 31.3 8.9 127 74-215 49-193 (291)
436 2hxt_A L-fuconate dehydratase; 67.3 29 0.001 33.7 10.3 125 73-216 197-327 (441)
437 2poz_A Putative dehydratase; o 67.3 54 0.0019 31.1 12.1 132 72-216 135-283 (392)
438 3aal_A Probable endonuclease 4 67.3 70 0.0024 28.6 13.0 125 77-204 19-169 (303)
439 1ccw_A Protein (glutamate muta 67.2 11 0.00038 30.5 6.1 88 79-175 44-132 (137)
440 3tfx_A Orotidine 5'-phosphate 67.2 30 0.001 31.4 9.6 68 79-156 73-163 (259)
441 3tfx_A Orotidine 5'-phosphate 67.1 21 0.00073 32.4 8.6 87 77-177 145-236 (259)
442 1yad_A Regulatory protein TENI 67.0 19 0.00065 31.2 8.1 57 83-158 82-138 (221)
443 3tr2_A Orotidine 5'-phosphate 66.8 21 0.00073 32.0 8.5 68 79-156 76-163 (239)
444 3mkc_A Racemase; metabolic pro 66.7 91 0.0031 29.7 14.1 123 77-216 160-290 (394)
445 3gbv_A Putative LACI-family tr 66.7 31 0.0011 30.3 9.7 52 132-188 51-103 (304)
446 1me8_A Inosine-5'-monophosphat 66.7 15 0.00052 36.5 8.2 72 81-160 297-384 (503)
447 3m47_A Orotidine 5'-phosphate 66.6 21 0.00072 31.6 8.3 72 78-156 80-156 (228)
448 3rhg_A Putative phophotriester 66.5 16 0.00055 34.9 8.0 42 103-144 171-215 (365)
449 2x7x_A Sensor protein; transfe 66.5 55 0.0019 29.5 11.5 72 112-188 22-96 (325)
450 3qja_A IGPS, indole-3-glycerol 66.5 18 0.00061 33.1 8.0 72 127-207 139-211 (272)
451 3bg3_A Pyruvate carboxylase, m 66.3 59 0.002 33.9 12.8 96 78-180 199-303 (718)
452 1vs1_A 3-deoxy-7-phosphoheptul 66.3 16 0.00055 33.6 7.7 84 124-218 38-131 (276)
453 1iq8_A Archaeosine tRNA-guanin 66.1 14 0.00047 37.8 7.8 84 70-159 169-253 (582)
454 3tr9_A Dihydropteroate synthas 66.1 13 0.00046 34.9 7.1 118 55-187 29-156 (314)
455 3inp_A D-ribulose-phosphate 3- 65.9 25 0.00086 31.7 8.8 167 72-256 36-225 (246)
456 3ru6_A Orotidine 5'-phosphate 65.8 15 0.00051 34.3 7.4 85 79-177 161-250 (303)
457 4e5t_A Mandelate racemase / mu 65.8 64 0.0022 30.9 12.3 131 73-216 150-292 (404)
458 2bmb_A Folic acid synthesis pr 65.6 19 0.00066 36.4 8.6 121 55-187 226-364 (545)
459 3o63_A Probable thiamine-phosp 65.6 11 0.00038 33.9 6.3 72 77-158 44-120 (243)
460 1s2w_A Phosphoenolpyruvate pho 65.5 8.4 0.00029 35.9 5.6 85 122-217 17-116 (295)
461 4h3d_A 3-dehydroquinate dehydr 65.4 78 0.0027 28.5 12.9 103 74-179 61-168 (258)
462 2dqw_A Dihydropteroate synthas 65.4 69 0.0024 29.6 11.9 81 75-157 176-270 (294)
463 3fok_A Uncharacterized protein 65.4 46 0.0016 31.1 10.5 114 81-215 133-273 (307)
464 1ofd_A Ferredoxin-dependent gl 65.3 16 0.00055 41.4 8.6 92 83-178 1046-1179(1520)
465 3k13_A 5-methyltetrahydrofolat 65.3 68 0.0023 29.7 11.8 110 67-187 27-141 (300)
466 3ixl_A Amdase, arylmalonate de 65.1 15 0.00051 32.9 7.1 79 71-160 41-126 (240)
467 3dz1_A Dihydrodipicolinate syn 65.1 18 0.00062 33.6 7.9 72 72-147 57-128 (313)
468 1vr6_A Phospho-2-dehydro-3-deo 65.0 18 0.00063 34.4 8.0 59 124-183 106-174 (350)
469 2czd_A Orotidine 5'-phosphate 64.9 12 0.00042 32.4 6.3 67 79-157 68-139 (208)
470 1viz_A PCRB protein homolog; s 64.6 6.1 0.00021 35.7 4.4 63 128-192 11-77 (240)
471 2zbt_A Pyridoxal biosynthesis 64.5 26 0.00088 32.0 8.8 65 79-155 31-105 (297)
472 1vcv_A Probable deoxyribose-ph 64.4 48 0.0016 29.4 10.2 40 112-152 172-211 (226)
473 3gip_A N-acyl-D-glutamate deac 64.3 48 0.0016 32.2 11.2 112 75-189 166-284 (480)
474 2ztj_A Homocitrate synthase; ( 64.2 25 0.00087 33.6 9.0 101 71-176 140-244 (382)
475 3h5o_A Transcriptional regulat 64.1 74 0.0025 28.8 12.0 80 74-157 162-246 (339)
476 2d2r_A Undecaprenyl pyrophosph 64.0 19 0.00065 32.6 7.5 121 75-203 45-177 (245)
477 3m9w_A D-xylose-binding peripl 64.0 35 0.0012 30.4 9.6 76 73-158 42-130 (313)
478 2qq6_A Mandelate racemase/muco 64.0 1E+02 0.0035 29.3 16.4 131 73-216 148-294 (410)
479 2qul_A D-tagatose 3-epimerase; 63.8 76 0.0026 27.8 14.2 134 78-214 19-185 (290)
480 2yw3_A 4-hydroxy-2-oxoglutarat 63.6 61 0.0021 28.0 10.7 58 80-157 74-131 (207)
481 3d8u_A PURR transcriptional re 63.6 72 0.0025 27.5 12.8 81 75-157 105-188 (275)
482 4adt_A Pyridoxine biosynthetic 63.5 8 0.00027 36.1 5.0 89 83-176 139-257 (297)
483 2wqp_A Polysialic acid capsule 63.5 18 0.00061 34.5 7.6 86 125-218 20-134 (349)
484 3e74_A Allantoinase; (beta/alp 63.5 13 0.00045 36.4 7.0 88 82-172 154-301 (473)
485 2ffi_A 2-pyrone-4,6-dicarboxyl 63.4 38 0.0013 30.1 9.6 118 78-212 42-164 (288)
486 3iwp_A Copper homeostasis prot 63.2 39 0.0013 31.3 9.6 132 60-205 92-228 (287)
487 3jy6_A Transcriptional regulat 63.2 44 0.0015 29.1 9.9 71 110-188 22-94 (276)
488 3ayv_A Putative uncharacterize 63.0 71 0.0024 27.6 11.2 120 77-210 11-158 (254)
489 3dbi_A Sugar-binding transcrip 63.0 53 0.0018 29.7 10.7 132 73-218 103-251 (338)
490 3sjn_A Mandelate racemase/muco 62.9 69 0.0024 30.3 11.8 124 76-216 148-278 (374)
491 1tv8_A MOAA, molybdenum cofact 62.7 38 0.0013 31.2 9.7 81 70-158 47-127 (340)
492 3oa3_A Aldolase; structural ge 62.5 53 0.0018 30.3 10.4 21 73-93 185-205 (288)
493 3mcm_A 2-amino-4-hydroxy-6-hyd 62.4 14 0.00047 36.5 6.7 119 55-187 192-323 (442)
494 1vhc_A Putative KHG/KDPG aldol 62.4 82 0.0028 27.7 16.5 188 56-286 16-213 (224)
495 2fli_A Ribulose-phosphate 3-ep 62.3 23 0.00077 30.5 7.6 81 88-175 130-216 (220)
496 3hm7_A Allantoinase; metallo-d 62.2 72 0.0025 30.3 12.0 118 65-186 66-189 (448)
497 2iks_A DNA-binding transcripti 62.2 70 0.0024 28.1 11.2 81 74-157 122-204 (293)
498 3rot_A ABC sugar transporter, 62.2 26 0.00089 31.1 8.3 71 112-189 23-96 (297)
499 1rpx_A Protein (ribulose-phosp 62.2 12 0.00041 32.8 5.8 77 74-157 21-98 (230)
500 2czd_A Orotidine 5'-phosphate 62.1 20 0.0007 30.9 7.3 101 58-175 101-203 (208)
No 1
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=100.00 E-value=2.5e-86 Score=645.93 Aligned_cols=332 Identities=82% Similarity=1.347 Sum_probs=299.1
Q ss_pred CCCCcccccCCCCCCCCcchhcccCCccccccCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccC
Q 018443 25 WRPPQAAIIPNYHLPMRSFEVKNRTSAEDIKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQL 104 (356)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~ 104 (356)
-++|+||+++++|+||+|+++|++++++||++.|+++|++|||++||+||+++++++++|+++.|++|++++|||||+++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~alvTPF~~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~ 108 (360)
T 4dpp_A 29 IDPFTAAVVPNFHLPMRSLEVKNRTNTDDIKALRVITAIKTPYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQL 108 (360)
T ss_dssp -------------------------CHHHHHTCCEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGG
T ss_pred cchhhhhhccccccccCCHhHhhccChhhcccCCeEEEEeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEecccccChhh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEE
Q 018443 105 MSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTII 184 (356)
Q Consensus 105 Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~~Piil 184 (356)
||.+||+++++.+++.+++|+|||+|+|+++|+++++++++|+++|||+++++||||++++++++++||++|+++.|+++
T Consensus 109 Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~PyY~k~sq~gl~~hf~~IA~a~Piil 188 (360)
T 4dpp_A 109 MSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSIEGLIAHFQSVLHMGPTII 188 (360)
T ss_dssp SCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHTTGGGSCEEE
T ss_pred CCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCCCCHHHHHHHhcCCCEEEEeecCchhhHhhhhCCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHH
Q 018443 185 YNVPSRTGQDIPPRVIHTMAQSPNLAGVKECVGNDRVEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMR 264 (356)
Q Consensus 185 Yn~P~~tG~~ls~~~l~~La~~pnivGiK~s~~d~~i~~~~~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~ 264 (356)
||+|++||++++++++.+|+++|||+|||++++|.++.++.+++|.||+|+|++++...+.+|++|+||+++|++|+.++
T Consensus 189 YNiP~rTg~~ls~e~l~~La~~pnIvGIKdssgd~~i~~~~~~~f~v~sG~D~~~l~~~l~~Ga~G~Is~~aNv~P~~~~ 268 (360)
T 4dpp_A 189 YNVPGRTGQDIPPRAIFKLSQNPNLAGVKECVGNKRVEEYTENGVVVWSGNDDECHDSRWDYGATGVISVTSNLVPGLMR 268 (360)
T ss_dssp EECHHHHSCCCCHHHHHHHTTSTTEEEEEECSCHHHHHHHHHTTCCEEECCGGGHHHHHHHSCCCEEEESGGGTCHHHHH
T ss_pred EeCCcccCCCCCHHHHHHHhcCCCEEEEEeCCCcHHHHHhhCCCEEEEeCChHHHHHHHHHcCCCEEEccchhhcHHHHH
Confidence 99999999999999999999999999999999998777767789999999998887655789999999999999999999
Q ss_pred HHHHcCCcHHHHHHHHHHHHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCcccccccccccc
Q 018443 265 ELMFGGKNPSLNTKLFPLIEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGRENFVGEKDVQV 344 (356)
Q Consensus 265 ~l~~ag~a~~l~~~l~~l~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~gl~~~~~~~~~~~ 344 (356)
++|++|+++++|+++.+++++++..+++..+|++|+++|++.+.+|+|+.+++++++++|+++++++|+..|.|.+++++
T Consensus 269 ~l~~aG~a~~l~~~l~pl~~~l~~~~~p~~vK~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~gl~~~~~~~~~~~ 348 (360)
T 4dpp_A 269 KLMFEGRNSSLNSKLLPLMAWLFHEPNPIGINTALAQLGVSRPVFRLPYVPLPLSKRLEFVKLVKEIGREHFVGEKDVQA 348 (360)
T ss_dssp HHHHSCCCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTSSCSEEETTCCCCCHHHHHHHHHHHHHHCGGGSSSSSCCCC
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcccCCccccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccccccC
Q 018443 345 LDDDDFILVDRY 356 (356)
Q Consensus 345 ~~~~~~~~~~~~ 356 (356)
++||||+|+|||
T Consensus 349 ~~~~~~~~~~~~ 360 (360)
T 4dpp_A 349 LDDDDFILIGRY 360 (360)
T ss_dssp CCGGGCEEESCC
T ss_pred ecccceEEeecC
Confidence 999999999999
No 2
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=100.00 E-value=1.7e-69 Score=521.87 Aligned_cols=297 Identities=31% Similarity=0.484 Sum_probs=265.4
Q ss_pred CCCCCCCcchhcccCCccccccCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHH
Q 018443 35 NYHLPMRSFEVKNRTSAEDIKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLI 114 (356)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li 114 (356)
.+|-+|-..+-... ....+++|++++++|||++||+||+++++++++|+++.|++||+++|||||+++||.+||++++
T Consensus 4 ~~~~~~~~~~~~~~--~~~~~~~Gv~~alvTPf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~ 81 (315)
T 3si9_A 4 HHHHHMGTLEAQTQ--GPGSMLKGAVTALITPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRII 81 (315)
T ss_dssp -------------------CCCCEEEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHH
T ss_pred cccccccchhhhcc--CCCccCCceeEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHH
Confidence 34555655543322 2223489999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCC
Q 018443 115 GHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTG 192 (356)
Q Consensus 115 ~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG 192 (356)
+.+++.+++|+|||+|+|++||+++++++++|+++|||+++++||||++++++++++||++|+++ +||++||+|++||
T Consensus 82 ~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg 161 (315)
T 3si9_A 82 ELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISIPIIIYNIPSRSV 161 (315)
T ss_dssp HHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHS
T ss_pred HHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEeCchhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999997 7999999999999
Q ss_pred CCCCHHHHHHHhc-CCCEEEEeecCchh-h---HhhhhCCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHH
Q 018443 193 QDIPPRVIHTMAQ-SPNLAGVKECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELM 267 (356)
Q Consensus 193 ~~ls~~~l~~La~-~pnivGiK~s~~d~-~---i~~~~~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~ 267 (356)
++++++++.+|++ +|||+|||++++|. + +.+..+++|.||+|+|+++++. +..|++|+||+++|++|+.++++|
T Consensus 162 ~~l~~~~~~~La~~~pnIvgiKdssgd~~~~~~l~~~~~~~f~v~~G~d~~~l~~-l~~G~~G~is~~an~~P~~~~~l~ 240 (315)
T 3si9_A 162 IDMAVETMRDLCRDFKNIIGVKDATGKIERASEQREKCGKDFVQLSGDDCTALGF-NAHGGVGCISVSSNVAPKLCAQLH 240 (315)
T ss_dssp CCCCHHHHHHHHHHCTTEEEEEECSCCTHHHHHHHHHHCSSSEEEESCGGGHHHH-HHTTCCEEEESGGGTCHHHHHHHH
T ss_pred CCCCHHHHHHHHhhCCCEEEEEeCCCCHHHHHHHHHHcCCCeEEEecCHHHHHHH-HHcCCCEEEecHHHhhHHHHHHHH
Confidence 9999999999997 99999999999983 3 4444578999999999998875 899999999999999999999998
Q ss_pred H---cCC---cHHHHHHHHHHHHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCcc
Q 018443 268 F---GGK---NPSLNTKLFPLIEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGRE 334 (356)
Q Consensus 268 ~---ag~---a~~l~~~l~~l~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~gl~ 334 (356)
+ +|| ++++|+++.++++.++..+++..+|++|+++|++.+.+|+|+.+++++++++|+++++++|+.
T Consensus 241 ~a~~~Gd~~~A~~l~~~l~~l~~~l~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~l~ 313 (315)
T 3si9_A 241 AACLCSDYKTALKLNDLLMPLNRAVFIEPSPAGIKYAAAKLGLCGTIVRSPIVPLSDTTKKIIDEALYHAGLL 313 (315)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTSSSTTHHHHHHHHHTTSSCCCCCTTSCCCCHHHHHHHHHHHHHTTSC
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHCCCCCCCcCCCCCCCCHHHHHHHHHHHHHCCCc
Confidence 7 465 678999999999988888899999999999999889999999999999999999999999864
No 3
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=100.00 E-value=3.2e-69 Score=519.96 Aligned_cols=280 Identities=34% Similarity=0.573 Sum_probs=264.7
Q ss_pred cccCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Q 018443 54 IKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGS 133 (356)
Q Consensus 54 ~~~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~ 133 (356)
++++|++++++|||++||+||+++++++++|+++.|++|++++|||||+++||.+||+++++.+++.+++|+|||+|+|+
T Consensus 22 ~~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~ 101 (314)
T 3qze_A 22 SMIAGSMVALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGA 101 (314)
T ss_dssp -CCCEEEEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCC
T ss_pred ccCCeeEEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCEEE
Q 018443 134 NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAG 211 (356)
Q Consensus 134 ~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~~pnivG 211 (356)
++|+++++++++|+++|||++|++||||++++++++++||++|+++ +||++||+|++||++++++++.+|+++|||+|
T Consensus 102 ~st~eai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvg 181 (314)
T 3qze_A 102 NSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLSKVPNIIG 181 (314)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEE
Confidence 9999999999999999999999999999999999999999999997 79999999999999999999999999999999
Q ss_pred EeecCchh-h---HhhhhCCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHH
Q 018443 212 VKECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFP 281 (356)
Q Consensus 212 iK~s~~d~-~---i~~~~~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~~~l~~ 281 (356)
||++++|. + +.+..+++|.||+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.+
T Consensus 182 iKdssgd~~~~~~~~~~~~~~f~v~~G~d~~~l~~-l~~Ga~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~ 260 (314)
T 3qze_A 182 IKEATGDLQRAKEVIERVGKDFLVYSGDDATAVEL-MLLGGKGNISVTANVAPRAMSDLCAAAMRGDAAAARAINDRLMP 260 (314)
T ss_dssp EEECSCCHHHHHHHHHHSCTTSEEEESCGGGHHHH-HHTTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred EEcCCCCHHHHHHHHHHcCCCeEEEecChHHHHHH-HHCCCCEEEecHHhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 99999983 3 3444568999999999988775 8999999999999999999999987 465 6789999999
Q ss_pred HHHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCcc
Q 018443 282 LIEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGRE 334 (356)
Q Consensus 282 l~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~gl~ 334 (356)
+++.++..+++..+|++|+++|++.+.+|+|+.+++++++++|+++++++|+.
T Consensus 261 l~~~l~~~~~~~~~K~al~~~G~~~~~~R~Pl~~l~~~~~~~l~~~l~~~~l~ 313 (314)
T 3qze_A 261 LHKALFIESNPIPVKWALHEMGLIPEGIRLPLTWLSPRCHEPLRQAMRQTGVL 313 (314)
T ss_dssp HHHHTTSSSTTHHHHHHHHHTTSSCSBCCTTSCCCCGGGHHHHHHHHHHTTCC
T ss_pred HHHHHHccCCHHHHHHHHHHCCCCCCCcCCCCCCCCHHHHHHHHHHHHhcCCc
Confidence 99988888889999999999999988899999999999999999999999864
No 4
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=100.00 E-value=5e-69 Score=515.07 Aligned_cols=278 Identities=35% Similarity=0.549 Sum_probs=262.6
Q ss_pred ccCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCC
Q 018443 55 KALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN 134 (356)
Q Consensus 55 ~~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~ 134 (356)
+++|++++++|||++||+||+++++++++|+++.|++|++++|||||+++||.+||+++++.+++++++|+|||+|+|++
T Consensus 7 ~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~ 86 (297)
T 3flu_A 7 MLQGSLVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGAN 86 (297)
T ss_dssp CCCEEEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCS
T ss_pred ccCeeEEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCc
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCEEEE
Q 018443 135 STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGV 212 (356)
Q Consensus 135 st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~~pnivGi 212 (356)
+|+++++++++|+++|||+++++||||++++++++++||++|+++ +||++||+|++||++++++++.+|+++|||+||
T Consensus 87 ~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgi 166 (297)
T 3flu_A 87 NTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLAEIPNIVGV 166 (297)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTTSTTEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCHHHHHHHHcCCCEEEE
Confidence 999999999999999999999999999999999999999999997 799999999999999999999999999999999
Q ss_pred eecCchh-h---HhhhhCCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHH
Q 018443 213 KECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPL 282 (356)
Q Consensus 213 K~s~~d~-~---i~~~~~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~~~l~~l 282 (356)
|++++|. + +.+..+++|.||+|+|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.++
T Consensus 167 Kdssgd~~~~~~~~~~~~~~f~v~~G~d~~~l~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l 245 (297)
T 3flu_A 167 KEASGNIGSNIELINRAPEGFVVLSGDDHTALPF-MLCGGHGVITVAANAAPKLFADMCRAALQGDIALARELNDRLIPI 245 (297)
T ss_dssp EECSCCHHHHHHHHHHSCTTCEEEECCGGGHHHH-HHTTCCEEEESGGGTCHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHHhcCCCeEEEECcHHHHHHH-HhCCCCEEEechHhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 9999983 3 3444568999999999988875 8999999999999999999999987 465 67899999999
Q ss_pred HHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 018443 283 IEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGR 333 (356)
Q Consensus 283 ~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~gl 333 (356)
++.++..+++..+|++|+++|++.+.+|+|+.+++++++++|+++++++|+
T Consensus 246 ~~~l~~~~~~~~~K~al~~~G~~~~~~R~Pl~~l~~~~~~~l~~~l~~~~~ 296 (297)
T 3flu_A 246 YDTMFCEPSPAAPKWAVSALGRCEPHVRLPLVPLTENGQAKVRAALKASGQ 296 (297)
T ss_dssp HTTTTSSSTTHHHHHHHHHTTSCCCCCCTTSCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHhcCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 988888889999999999999986569999999999999999999999875
No 5
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3.1e-69 Score=520.22 Aligned_cols=278 Identities=23% Similarity=0.346 Sum_probs=263.1
Q ss_pred ccCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCC
Q 018443 55 KALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN 134 (356)
Q Consensus 55 ~~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~ 134 (356)
+++|++++++|||++||+||+++++++++|+++.|++|++++|||||+++||.+||+++++.+++.+++|+|||+|+|++
T Consensus 24 ~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~ 103 (315)
T 3na8_A 24 SIHGIIGYTITPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDL 103 (315)
T ss_dssp CCCEEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCS
T ss_pred ccCceEEEeeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHH-hcCCCEEE
Q 018443 135 STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTM-AQSPNLAG 211 (356)
Q Consensus 135 st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~L-a~~pnivG 211 (356)
+|+++++++++|+++|||+++++||||++++++++++||++|+++ +||++||+|++||++++++++.+| +++|||+|
T Consensus 104 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L~a~~pnIvg 183 (315)
T 3na8_A 104 TTAKTVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRIVREVDNVTM 183 (315)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHSTTEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCcchhCcCCCHHHHHHHHhcCCCEEE
Confidence 999999999999999999999999999999999999999999997 799999999999999999999999 79999999
Q ss_pred EeecCchh-h---HhhhhCCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHH
Q 018443 212 VKECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFP 281 (356)
Q Consensus 212 iK~s~~d~-~---i~~~~~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~~~l~~ 281 (356)
||++++|. + +.+..+++|.||+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.+
T Consensus 184 iKdssgd~~~~~~~~~~~~~~f~v~~G~D~~~l~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~ 262 (315)
T 3na8_A 184 VKESTGDIQRMHKLRLLGEGRVPFYNGCNPLALEA-FVAGAKGWCSAAPNLIPTLNGQLYQAVLDGDLEKARALFYRQLP 262 (315)
T ss_dssp EEECSSCHHHHHHHHHHTTTCSCEEECCGGGHHHH-HHHTCSEEEESGGGTCHHHHHHHHHHHHTTBHHHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEeCchHHHHHH-HHCCCCEEEechhhhCHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 99999983 3 4444567899999999998775 8999999999999999999999986 465 6789999999
Q ss_pred HHHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 018443 282 LIEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGR 333 (356)
Q Consensus 282 l~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~gl 333 (356)
+++.++..+++..+|++|+++|++.+.+|+|+.+++++++++|+++++++|.
T Consensus 263 l~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~g~ 314 (315)
T 3na8_A 263 LLDFILRRGLPTTIKAGLGLSGLEVGAPRLPVQALDTEGCRYLQGLLEELRG 314 (315)
T ss_dssp HHHHHHHHCHHHHHHHHHHHTTCCCCCCCTTSCCCCHHHHHHHHHHHHHHC-
T ss_pred HHHHHHccCcHHHHHHHHHHcCCCCCCcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 9999888888999999999999998999999999999999999999999863
No 6
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=100.00 E-value=6.3e-69 Score=515.27 Aligned_cols=278 Identities=32% Similarity=0.550 Sum_probs=262.4
Q ss_pred cccCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Q 018443 54 IKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGS 133 (356)
Q Consensus 54 ~~~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~ 133 (356)
++++|+++|++|||++||+||+++++++++|+++.|++|++++|||||+++||.+||+++++.+++.+++|+|||+|+|+
T Consensus 11 ~~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~ 90 (301)
T 1xky_A 11 IDFGTIATAMVTPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGS 90 (301)
T ss_dssp CCCCSEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC
T ss_pred cCCCceEEeeECcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCEEE
Q 018443 134 NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAG 211 (356)
Q Consensus 134 ~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~~pnivG 211 (356)
++|+++++++++|+++|||++|++||||++++++++++||++|+++ +||++||+|++||++++++++.+|+++|||+|
T Consensus 91 ~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvg 170 (301)
T 1xky_A 91 NNTHASIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRLSEIENIVA 170 (301)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHTSTTEEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcCCCEEE
Confidence 9999999999999999999999999999999999999999999997 79999999999999999999999999999999
Q ss_pred EeecCchh-h---HhhhhCCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHH
Q 018443 212 VKECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFP 281 (356)
Q Consensus 212 iK~s~~d~-~---i~~~~~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~~~l~~ 281 (356)
||++++|. + +.+..+++|.||+|+|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.+
T Consensus 171 iKdssgd~~~~~~~~~~~~~~f~v~~G~d~~~l~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~ 249 (301)
T 1xky_A 171 IKDAGGDVLTMTEIIEKTADDFAVYSGDDGLTLPA-MAVGAKGIVSVASHVIGNEMQEMIAAFQAGEFKKAQKLHQLLVR 249 (301)
T ss_dssp EEECSSCHHHHHHHHHHSCTTCEEEESSGGGHHHH-HHTTCCEEEESTHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred EEcCCCCHHHHHHHHHhcCCCeEEEECcHHHHHHH-HHcCCCEEEcCHHHhCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 99999983 3 3344567899999999988875 8999999999999999999999986 465 6789999999
Q ss_pred HHHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcC
Q 018443 282 LIEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIG 332 (356)
Q Consensus 282 l~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~g 332 (356)
+++.++..+++..+|++|+++|++.+.+|+|+.+++++++++|++++++++
T Consensus 250 l~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~ 300 (301)
T 1xky_A 250 VTDSLFMAPSPTPVKTALQMVGLDVGSVRLPLLPLTEEERVTLQSVMQSIP 300 (301)
T ss_dssp HHHHTTSSSTTHHHHHHHHHTTCCCCCCCTTSCCCCHHHHHHHHHHHHTSC
T ss_pred HHHHHhcCCCHHHHHHHHHHcCCCCCCcCCCCCCCCHHHHHHHHHHHHhcc
Confidence 999888788899999999999998899999999999999999999999865
No 7
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=100.00 E-value=3.9e-69 Score=516.46 Aligned_cols=277 Identities=19% Similarity=0.227 Sum_probs=262.5
Q ss_pred ccCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCC
Q 018443 55 KALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN 134 (356)
Q Consensus 55 ~~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~ 134 (356)
+++|++++++|||++||+||+++++++++|+++.|++|++++|||||+++||.+||+++++.+++.+++|+|||+|+|++
T Consensus 4 ~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~ 83 (300)
T 3eb2_A 4 DFHGVFPYLVSPVDAEGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVAST 83 (300)
T ss_dssp CCCEEEEBCCCCBCTTSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEES
T ss_pred cCCeeEEEEeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCEEEE
Q 018443 135 STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGV 212 (356)
Q Consensus 135 st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~~pnivGi 212 (356)
+|+++++++++|+++|||+++++||||++++++++++||++|+++ +||++||+|++||++++++++.+|+++|||+||
T Consensus 84 ~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgi 163 (300)
T 3eb2_A 84 SVADAVAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARLAEHPRIRYI 163 (300)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCHHHHHHHHTSTTEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECccccCCCCCHHHHHHHHcCCCEEEE
Confidence 999999999999999999999999999999999999999999997 799999999999999999999999999999999
Q ss_pred eecCchh-h---HhhhhCCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHH
Q 018443 213 KECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPL 282 (356)
Q Consensus 213 K~s~~d~-~---i~~~~~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~~~l~~l 282 (356)
|++++|. + +.+..+++|.||+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.++
T Consensus 164 Kdssgd~~~~~~~~~~~~~~f~v~~G~d~~~~~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l 242 (300)
T 3eb2_A 164 KDASTNTGRLLSIINRCGDALQVFSASAHIPAAV-MLIGGVGWMAGPACIAPRQSVALYELCKAQRWDEALMLQRKLWRV 242 (300)
T ss_dssp EECSSBHHHHHHHHHHHGGGSEEEECTTSCHHHH-HHTTCCEEEEGGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHTHH
T ss_pred EcCCCCHHHHHHHHHHcCCCeEEEeCcHHHHHHH-HhCCCCEEEeChhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 9999983 3 3444567899999999998775 8999999999999999999999986 465 67899999999
Q ss_pred HHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcC
Q 018443 283 IEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIG 332 (356)
Q Consensus 283 ~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~g 332 (356)
++.++..+++..+|++|+++|++.+.+|+|+.+++++++++|++++++++
T Consensus 243 ~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~ 292 (300)
T 3eb2_A 243 NEAFAKFNLAACIKAGLALQGYDVGDPIPPQAALTAEERKAVEKVLAEIA 292 (300)
T ss_dssp HHHHTTSCHHHHHHHHHHHTTCCCCCCCTTSCCCCHHHHHHHHHHHHHC-
T ss_pred HHHHHcCCCHHHHHHHHHHCCCCCCCcCCCCCCCCHHHHHHHHHHHHHHh
Confidence 99988888899999999999999899999999999999999999999875
No 8
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=100.00 E-value=6.6e-69 Score=516.41 Aligned_cols=282 Identities=20% Similarity=0.330 Sum_probs=262.3
Q ss_pred ccccccCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEe
Q 018443 51 AEDIKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGN 130 (356)
Q Consensus 51 ~~~~~~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~g 130 (356)
+++++++|++++++|||++||+||+++++++++|+++.|++|++++|||||+++||.+||+++++.+++.+++|+|||+|
T Consensus 10 ~~~~~~~Gi~~alvTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaG 89 (307)
T 3s5o_A 10 GKKVDIAGIYPPVTTPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAG 89 (307)
T ss_dssp --CCCCCEEECBCCCCBCTTSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEE
T ss_pred CCCCCCCceEEeeEccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEe
Confidence 44567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCC--CCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcC
Q 018443 131 TGSNSTREAIHATEQGFAVGMHAALHINPYYGK--TSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQS 206 (356)
Q Consensus 131 vg~~st~~ai~lar~a~~~Gadavlv~pP~y~~--~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~~ 206 (356)
+|+++|+++++++++|+++|||++|++||||++ ++|+++++||++|+++ +||++||+|++||++++++++.+|+++
T Consensus 90 vg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~ 169 (307)
T 3s5o_A 90 SGCESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVTLSQH 169 (307)
T ss_dssp CCCSSHHHHHHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHTS
T ss_pred cCCCCHHHHHHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCcccCCCCCHHHHHHHhcC
Confidence 999999999999999999999999999999986 7999999999999997 799999999999999999999999999
Q ss_pred CCEEEEeecCchh-hH---hhhh-CCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHH
Q 018443 207 PNLAGVKECVGND-RV---EHYT-GNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSL 275 (356)
Q Consensus 207 pnivGiK~s~~d~-~i---~~~~-~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l 275 (356)
|||+|||++++|. ++ .+.. +++|.||+|+|+++++. +.+|++|+||+++|++|+.++++|+ +|| ++++
T Consensus 170 pnIvgiKdssgd~~~~~~~~~~~~~~~f~v~~G~d~~~l~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l 248 (307)
T 3s5o_A 170 PNIVGMXDSGGDVTRIGLIVHKTRKQDFQVLAGSAGFLMAS-YALGAVGGVCALANVLGAQVCQLERLCCTGQWEDAQKL 248 (307)
T ss_dssp TTEEEEEECSCCHHHHHHHHHHTTTSSCEEEESSGGGHHHH-HHHTCCEEECGGGGTCHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCEEEEEcCCCCHHHHHHHHHhccCCCeEEEeCcHHHHHHH-HHcCCCEEEechhhhhHHHHHHHHHHHHCCCHHHHHHH
Confidence 9999999999983 33 3333 47899999999988875 8999999999999999999999986 465 6789
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 018443 276 NTKLFPLIEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGR 333 (356)
Q Consensus 276 ~~~l~~l~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~gl 333 (356)
|+++.++...++..+++..+|++|+++|++.+.+|+|+.+++++++++|+++|+++|+
T Consensus 249 ~~~l~~~~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~g~ 306 (307)
T 3s5o_A 249 QHRLIEPNAAVTRRFGIPGLKKIMDWFGYYGGPCRAPLQELSPAEEEALRMDFTSNGW 306 (307)
T ss_dssp HHHHHHHHHHTTTTTHHHHHHHHHHHHTSCCCCCCTTSCCCCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHcCCCCCCcCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 9999999887777777888999999999999999999999999999999999999875
No 9
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=100.00 E-value=5.6e-69 Score=513.43 Aligned_cols=277 Identities=36% Similarity=0.584 Sum_probs=262.2
Q ss_pred cCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCC
Q 018443 56 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 135 (356)
Q Consensus 56 ~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~s 135 (356)
++|++++++|||++||+||+++++++++|+++.|++|++++|||||+++||.+||+++++.+++.+++|+|||+|+|+++
T Consensus 2 ~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~ 81 (291)
T 3tak_A 2 IQGSIVAIVTPMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANS 81 (291)
T ss_dssp CCEEEEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSS
T ss_pred CceeEeeeECCCCCCCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCEEEEe
Q 018443 136 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 213 (356)
Q Consensus 136 t~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~~pnivGiK 213 (356)
|+++++++++|+++|||++|++||||++++++++++||++|+++ +||++||+|++||++++++++.+|+++|||+|||
T Consensus 82 t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK 161 (291)
T 3tak_A 82 TREAIELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVELPLILYNVPGRTGVDLSNDTAVRLAEIPNIVGIK 161 (291)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHTTSTTEEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEecccccCCCCCHHHHHHHHcCCCEEEEE
Confidence 99999999999999999999999999999999999999999997 7999999999999999999999999999999999
Q ss_pred ecCchh-h---HhhhhCCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHHH
Q 018443 214 ECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPLI 283 (356)
Q Consensus 214 ~s~~d~-~---i~~~~~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~~~l~~l~ 283 (356)
++++|. + +.+..+++|.||+|+|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.+++
T Consensus 162 ~ssgd~~~~~~~~~~~~~~f~v~~G~d~~~~~~-l~~G~~G~is~~~n~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~ 240 (291)
T 3tak_A 162 DATGDVPRGKALIDALNGKMAVYSGDDETAWEL-MLLGADGNISVTANIAPKAMSEVCAVAIAKDEQQAKTLNNKIANLH 240 (291)
T ss_dssp ECSCCHHHHHHHHHHHTTSSEEEECCHHHHHHH-HHTTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHTTHHHH
T ss_pred eCCCCHHHHHHHHHHcCCCeEEEECcHHHHHHH-HHCCCCEEEechhhhcHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 999983 3 3444578999999999988875 8999999999999999999999986 465 678999999999
Q ss_pred HHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 018443 284 EWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGR 333 (356)
Q Consensus 284 ~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~gl 333 (356)
+.++..+++..+|++|+++|++.+.+|+|+.+++++++++|+++++++|+
T Consensus 241 ~~l~~~~~~~~~K~al~~~G~~~~~~R~Pl~~l~~~~~~~l~~~l~~~~~ 290 (291)
T 3tak_A 241 NILFCESNPIPVKWALHEMGLIDTGIRLPLTPLAEQYREPLRNALKDAGI 290 (291)
T ss_dssp HHTTSSSTTHHHHHHHHHTTSSCSCCCTTSCSCCGGGHHHHHHHHHHTTC
T ss_pred HHHhccCChHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 98888889999999999999986569999999999999999999999875
No 10
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.3e-68 Score=513.76 Aligned_cols=280 Identities=26% Similarity=0.405 Sum_probs=262.1
Q ss_pred CCccccccCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEE
Q 018443 49 TSAEDIKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVI 128 (356)
Q Consensus 49 ~~~~~~~~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi 128 (356)
++.++ ++|++++++|||++||+||+++++++++|+++.|++|++++|||||+++||.+||+++++.+++.+++|+|||
T Consensus 12 ~~~~~--~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi 89 (304)
T 3cpr_A 12 TGVEH--FGTVGVAMVTPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLI 89 (304)
T ss_dssp TTHHH--HCSEEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEE
T ss_pred ccCCC--CCceEEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 44443 6899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcC
Q 018443 129 GNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQS 206 (356)
Q Consensus 129 ~gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~~ 206 (356)
+|+|+++|+++++++++|+++|||+++++||||++++++++++||++|+++ +||++||+|++||++++++++.+|+++
T Consensus 90 aGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~ 169 (304)
T 3cpr_A 90 AGVGTNNTRTSVELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATEVPICLYDIPGRSGIPIESDTMRRLSEL 169 (304)
T ss_dssp EECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTTS
T ss_pred ecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999997 799999999999999999999999999
Q ss_pred CCEEEEeecCchh-hH---hhhhCCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHH
Q 018443 207 PNLAGVKECVGND-RV---EHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLN 276 (356)
Q Consensus 207 pnivGiK~s~~d~-~i---~~~~~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~ 276 (356)
|||+|||++++|. ++ .+.. +|.||+|+|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|
T Consensus 170 pnIvgiKdssgd~~~~~~~~~~~--~f~v~~G~d~~~l~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~ 246 (304)
T 3cpr_A 170 PTILAVXDAKGDLVAATSLIKET--GLAWYSGDDPLNLVW-LALGGSGFISVIGHAAPTALRELYTSFEEGDLVRAREIN 246 (304)
T ss_dssp TTEEEEEECSCCHHHHHHHHHHH--CCEEEECSGGGHHHH-HHTTCCEEEESGGGTCHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred CCEEEEecCCCCHHHHHHHHHhc--CEEEEECcHHHHHHH-HHCCCCEEEecHHHhhHHHHHHHHHHHHCCCHHHHHHHH
Confidence 9999999999983 33 3333 899999999988875 8999999999999999999999986 465 67899
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 018443 277 TKLFPLIEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGR 333 (356)
Q Consensus 277 ~~l~~l~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~gl 333 (356)
+++.++++.++..+++..+|++|+++|++.+.+|+|+.+++++++++|+++++++|+
T Consensus 247 ~~l~~l~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~ 303 (304)
T 3cpr_A 247 AKLSPLVAAQGRLGGVSLAKAALRLQGINVGDPRLPIMAPNEQELEALREDMKKAGV 303 (304)
T ss_dssp HHTHHHHHHHHHHCHHHHHHHHHHHTTCCCCCCCTTSCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHcCCCCCCcCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 999999998877778889999999999988999999999999999999999999875
No 11
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=100.00 E-value=6.8e-69 Score=515.07 Aligned_cols=277 Identities=32% Similarity=0.534 Sum_probs=262.7
Q ss_pred ccCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCC-CcEEEEecCC
Q 018443 55 KALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA-SVKVIGNTGS 133 (356)
Q Consensus 55 ~~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~g-rvpVi~gvg~ 133 (356)
+++|++++++||| +||+||+++++++++|+++.|++|++++|||||+++||.+||+++++.+++.+++ |+|||+|+|+
T Consensus 8 ~~~Gv~~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~ 86 (301)
T 3m5v_A 8 IIIGAMTALITPF-KNGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGS 86 (301)
T ss_dssp CCCEEEEECCCCE-ETTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCC
T ss_pred cCCceeEeeecCc-CCCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCC
Confidence 4899999999999 9999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcC-CCEE
Q 018443 134 NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQS-PNLA 210 (356)
Q Consensus 134 ~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~~-pniv 210 (356)
++|+++++++++|+++|||+++++||||++++++++++||++|+++ +||++||+|++||++++++++.+|+++ |||+
T Consensus 87 ~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pniv 166 (301)
T 3m5v_A 87 NATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRDCENIY 166 (301)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHhcCCCEE
Confidence 9999999999999999999999999999999999999999999997 799999999999999999999999987 9999
Q ss_pred EEeecCchh-h---HhhhhCCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHH
Q 018443 211 GVKECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLF 280 (356)
Q Consensus 211 GiK~s~~d~-~---i~~~~~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~~~l~ 280 (356)
|||++++|. + +.+.. ++|.||+|+|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.
T Consensus 167 giKdssgd~~~~~~~~~~~-~~f~v~~G~d~~~~~~-l~~G~~G~is~~~n~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~ 244 (301)
T 3m5v_A 167 GVKEASGNIDKCVDLLAHE-PRMMLISGEDAINYPI-LSNGGKGVISVTSNLLPDMISALTHFALDENYKEAKKINDELY 244 (301)
T ss_dssp EEEECSSCHHHHHHHHHHC-TTSEEEECCGGGHHHH-HHTTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHTH
T ss_pred EEEeCCCCHHHHHHHHHhC-CCeEEEEccHHHHHHH-HHcCCCEEEehHHHhhHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 999999983 3 34444 8899999999988875 8999999999999999999999986 465 678999999
Q ss_pred HHHHHHhcCCChHHHHHHHHHcCCC-CCCCCCCCCCCCHHHHHHHHHHHHHcCcc
Q 018443 281 PLIEWLFQEPNPIPLNTALAQLGVV-RPVFRLPYVPLPQEKRAEFVNLVNQIGRE 334 (356)
Q Consensus 281 ~l~~~~~~~~~~~~~K~al~~~G~~-~g~~R~Pl~~l~~~~~~~l~~~l~~~gl~ 334 (356)
++++.++..+++..+|++|+++|++ .+.+|+|+.+++++++++|+++++++|+.
T Consensus 245 ~l~~~~~~~~~~~~~K~al~~~G~~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~l~ 299 (301)
T 3m5v_A 245 NINKILFCESNPIPIKTAMYLAGLIESLEFRLPLCSPSKENFAKIEEVMKKYKIK 299 (301)
T ss_dssp HHHHHTTSSSTTHHHHHHHHHTTSSSCCCCCTTCCCCCHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHhccCCHHHHHHHHHHCCCCCCCCcCCCCCCCCHHHHHHHHHHHHHCcCc
Confidence 9999988888999999999999998 89999999999999999999999999875
No 12
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=100.00 E-value=8.4e-69 Score=516.38 Aligned_cols=283 Identities=31% Similarity=0.544 Sum_probs=266.7
Q ss_pred cccccCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec
Q 018443 52 EDIKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT 131 (356)
Q Consensus 52 ~~~~~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv 131 (356)
++++++|++++++|||++||+||+++++++++|+++.|++|++++|||||+++||.+||+++++.+++++++|+|||+|+
T Consensus 4 ~~~~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGv 83 (311)
T 3h5d_A 4 QDLKECKIITAFITPFHEDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGV 83 (311)
T ss_dssp HHHTTCCEEEECCCCBCTTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEEC
T ss_pred CccccCceEEeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC
Confidence 34679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCC-CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCC
Q 018443 132 GSNSTREAIHATEQGFAVGM-HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPN 208 (356)
Q Consensus 132 g~~st~~ai~lar~a~~~Ga-davlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~~pn 208 (356)
|+++|+++++++++|+++|+ |++|++||||++++++++++||++|+++ +||++||+|++||++++++++.+|+++||
T Consensus 84 g~~~t~~ai~la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pn 163 (311)
T 3h5d_A 84 GTNDTRDSIEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADASDLPIIIYNIPGRVVVELTPETMLRLADHPN 163 (311)
T ss_dssp CCSSHHHHHHHHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSCSSCEEEEECHHHHSSCCCHHHHHHHHTSTT
T ss_pred CCcCHHHHHHHHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcCCC
Confidence 99999999999999999997 9999999999999999999999999997 79999999999999999999999999999
Q ss_pred EEEEeecCchh-h---HhhhhCCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHHHH
Q 018443 209 LAGVKECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTK 278 (356)
Q Consensus 209 ivGiK~s~~d~-~---i~~~~~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~~~ 278 (356)
|+|||+++ |. + +.+..+++|.||+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|++
T Consensus 164 IvgiKdss-d~~~~~~~~~~~~~~f~v~~G~d~~~l~~-l~~Ga~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~ 241 (311)
T 3h5d_A 164 IIGVKECT-SLANMAYLIEHKPEEFLIYTGEDGDAFHA-MNLGADGVISVASHTNGDEMHEMFTAIAESDMKKAAAIQRK 241 (311)
T ss_dssp EEEEEECS-CHHHHHHHHHHCCSSCEEEECCGGGHHHH-HHHTCCEEEESTHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred EEEEEeCC-CHHHHHHHHHHcCCCEEEEECcHHHHHHH-HHcCCCEEEechhhhCHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 99999999 83 3 3344567899999999988875 8999999999999999999999986 465 6789999
Q ss_pred HHHHHHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCcccc
Q 018443 279 LFPLIEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGRENF 336 (356)
Q Consensus 279 l~~l~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~gl~~~ 336 (356)
+.++++.++..+++..+|++|+++|++.+.+|+|+.+++++++++|+++++++|+++-
T Consensus 242 l~~l~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~~~~ 299 (311)
T 3h5d_A 242 FIPKVNALFSYPSPAPVKAILNYMGFEAGPTRLPLVPAPEEDVKRIIKVVVDGDYEAT 299 (311)
T ss_dssp HHHHHHHHTSSSTTHHHHHHHHHHTSCCCCCCTTCCCCCHHHHHHHHHHHSCCCCCC-
T ss_pred HHHHHHHHHccCCHHHHHHHHHHCCCCCCCcCCCCCCCCHHHHHHHHHHHHHccchhh
Confidence 9999999998889999999999999999999999999999999999999999998763
No 13
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=100.00 E-value=5.3e-69 Score=516.38 Aligned_cols=279 Identities=28% Similarity=0.440 Sum_probs=263.8
Q ss_pred ccCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCC
Q 018443 55 KALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN 134 (356)
Q Consensus 55 ~~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~ 134 (356)
+++|++++++|||++||+||+++++++++|+++.|++|++++|||||+++||.+||+++++.+++.+++|+|||+|+|++
T Consensus 15 ~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~ 94 (304)
T 3l21_A 15 RLGTLLTAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTY 94 (304)
T ss_dssp HHCSEEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCS
T ss_pred cCCceEEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCC
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCEEEE
Q 018443 135 STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGV 212 (356)
Q Consensus 135 st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~~pnivGi 212 (356)
+|+++++++++|+++|||+++++||||++++++++++||++|+++ +||++||+|++||++++++++.+|+++|||+||
T Consensus 95 ~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgi 174 (304)
T 3l21_A 95 DTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALASHPNIVGV 174 (304)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHHHTSTTEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEEE
Confidence 999999999999999999999999999999999999999999998 799999999999999999999999999999999
Q ss_pred eecCchh-hHhhh-hCCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHHHH
Q 018443 213 KECVGND-RVEHY-TGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPLIE 284 (356)
Q Consensus 213 K~s~~d~-~i~~~-~~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~~~l~~l~~ 284 (356)
|++++|. ++.++ ..++|.||+|+|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.++++
T Consensus 175 Kdssgd~~~~~~~~~~~~f~v~~G~d~~~l~~-l~~Ga~G~is~~~n~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~ 253 (304)
T 3l21_A 175 XDAKADLHSGAQIMADTGLAYYSGDDALNLPW-LRMGATGFISVIAHLAAGQLRELLSAFGSGDIATARKINIAVAPLCN 253 (304)
T ss_dssp EECSCCHHHHHHHHHHHCCEEEESSGGGHHHH-HHHTCCEEEESTHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHH
T ss_pred ECCCCCHHHHHHHhcCCCeEEEeCchHHHHHH-HHcCCCEEEecHHhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 9999984 43332 356899999999988875 8999999999999999999999986 465 6789999999999
Q ss_pred HHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCcc
Q 018443 285 WLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGRE 334 (356)
Q Consensus 285 ~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~gl~ 334 (356)
.++..+++..+|++|+++|++.+.+|+|+.+++++++++|+++++++|+.
T Consensus 254 ~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~l~ 303 (304)
T 3l21_A 254 AMSRLGGVTLSKAGLRLQGIDVGDPRLPQVAATPEQIDALAADMRAASVL 303 (304)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCCCTTSCCCCHHHHHHHHHHHHHTTSC
T ss_pred HHHccCCHHHHHHHHHhcCCCCCCcCCCCCCCCHHHHHHHHHHHHHcCCC
Confidence 88888889999999999999999999999999999999999999999864
No 14
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=100.00 E-value=1.1e-68 Score=511.57 Aligned_cols=277 Identities=34% Similarity=0.552 Sum_probs=260.6
Q ss_pred cCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCC
Q 018443 56 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 135 (356)
Q Consensus 56 ~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~s 135 (356)
++|++++++|||++||+||+++++++++|+++.|++|++++|||||+++||.+||+++++.+++.+++|+|||+|+|+++
T Consensus 2 ~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~ 81 (292)
T 2ojp_A 2 FTGSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANA 81 (292)
T ss_dssp CCEEEEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSS
T ss_pred CCceeeeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCcc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCEEEEe
Q 018443 136 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 213 (356)
Q Consensus 136 t~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~~pnivGiK 213 (356)
|+++++++++|+++|||++|++||||+++|++++++||++|+++ +||++||+|++||++++++++.+|+++|||+|||
T Consensus 82 t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK 161 (292)
T 2ojp_A 82 TAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKVKNIIGIX 161 (292)
T ss_dssp HHHHHHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEECCHHHHSCCCCHHHHHHHHTSTTEEEC-
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcchhccCCCHHHHHHHHcCCCEEEEe
Confidence 99999999999999999999999999999999999999999998 7999999999999999999999999999999999
Q ss_pred ecCchh-hH---hhhhCCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHHH
Q 018443 214 ECVGND-RV---EHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPLI 283 (356)
Q Consensus 214 ~s~~d~-~i---~~~~~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~~~l~~l~ 283 (356)
++++|. ++ .+..+++|.||+|+|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.+++
T Consensus 162 ~s~gd~~~~~~~~~~~~~~f~v~~G~d~~~~~~-l~~G~~G~is~~~n~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~ 240 (292)
T 2ojp_A 162 EATGNLTRVNQIKELVSDDFVLLSGDDASALDF-MQYGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINERLMPLH 240 (292)
T ss_dssp CCSCCTHHHHHHHTTSCTTSBCEESCGGGHHHH-HHTTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEECcHHHHHHH-HHCCCcEEEeCHHHhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 999983 33 333456899999999998875 8999999999999999999999986 565 678999999999
Q ss_pred HHHhcCCChHHHHHHHHHcCCCC-CCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 018443 284 EWLFQEPNPIPLNTALAQLGVVR-PVFRLPYVPLPQEKRAEFVNLVNQIGR 333 (356)
Q Consensus 284 ~~~~~~~~~~~~K~al~~~G~~~-g~~R~Pl~~l~~~~~~~l~~~l~~~gl 333 (356)
+.++..+++..+|++|+++|++. +.+|+|+.+++++++++++++++++|+
T Consensus 241 ~~~~~~~~~~~~K~al~~~G~~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~ 291 (292)
T 2ojp_A 241 NKLFVEPNPIPVKWACKELGLVATDTLRLPMTPITDSGRETVRAALKHAGL 291 (292)
T ss_dssp HHTTSSSTTHHHHHHHHHTTSSSCCCCCTTSCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHhcCCCHHHHHHHHHHcCCCCCCCcCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 98887888999999999999987 999999999999999999999999875
No 15
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=100.00 E-value=2e-68 Score=510.85 Aligned_cols=278 Identities=31% Similarity=0.497 Sum_probs=261.3
Q ss_pred cCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCC
Q 018443 56 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 135 (356)
Q Consensus 56 ~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~s 135 (356)
++|++++++||| +||+||+++++++++|+++.|++|++++|||||+++||.+||+++++.+++.+++|+|||+|+|+++
T Consensus 2 ~~Gv~~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~ 80 (297)
T 2rfg_A 2 FRGSLIAMITPF-INGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNN 80 (297)
T ss_dssp CCEEEEECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSS
T ss_pred CceEEEeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCC
Confidence 689999999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCEEEEe
Q 018443 136 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 213 (356)
Q Consensus 136 t~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~~pnivGiK 213 (356)
|+++++++++|+++|||++|++||||+++|++++++||++|+++ +||++||+|++||++++++++.+|+++|||+|||
T Consensus 81 t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiK 160 (297)
T 2rfg_A 81 PVEAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARLAALPRIVGVK 160 (297)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcCCCEEEEE
Confidence 99999999999999999999999999999999999999999997 7999999999999999999999999999999999
Q ss_pred ecCchh-h---HhhhhCCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHHH
Q 018443 214 ECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPLI 283 (356)
Q Consensus 214 ~s~~d~-~---i~~~~~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~~~l~~l~ 283 (356)
++++|. + +.+..+++|.||+|+|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|.++.+++
T Consensus 161 ds~gd~~~~~~~~~~~~~~f~v~~G~d~~~l~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~ 239 (297)
T 2rfg_A 161 DATTDLARISRERMLINKPFSFLSGDDMTAIAY-NASGGQGCISVSANIAPALYGQMQTATLQGDFREALRIHDLLAPLH 239 (297)
T ss_dssp ECSCCTTHHHHHHTTCCSCCEEEESCGGGHHHH-HHTTCCEEEESGGGTCHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred eCCCCHHHHHHHHHhcCCCEEEEeCcHHHHHHH-HHCCCCEEEecHHHhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 999983 3 3333456899999999998875 8999999999999999999999986 465 678999999999
Q ss_pred HHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCccc
Q 018443 284 EWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGREN 335 (356)
Q Consensus 284 ~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~gl~~ 335 (356)
+.++..+++..+|++|+++|++.+.+|+|+.+++++++++|+++++++++..
T Consensus 240 ~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~~~ 291 (297)
T 2rfg_A 240 EALFREPSPAGAKYAASLLGLCNEECRLPIVPLSEQTKSDIKNIINELYRLE 291 (297)
T ss_dssp HHHHSSSTTHHHHHHHHHTTSSCCCCCTTSCCCCHHHHHHHHHHHHHHCC--
T ss_pred HHHhcCCCHHHHHHHHHHcCCCCCCcCCCCCCCCHHHHHHHHHHHHhcchhh
Confidence 9888888899999999999998899999999999999999999999998753
No 16
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=100.00 E-value=1.6e-68 Score=510.17 Aligned_cols=276 Identities=31% Similarity=0.501 Sum_probs=259.8
Q ss_pred cCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCC
Q 018443 56 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 135 (356)
Q Consensus 56 ~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~s 135 (356)
++|++++++|||++|| ||+++++++++|++++|++|++++|||||+++||.+||+++++.+++.+++|+|||+|+|+++
T Consensus 3 ~~Gv~~a~vTPf~~dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~ 81 (291)
T 3a5f_A 3 FKGSGVAIITPFTNTG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNN 81 (291)
T ss_dssp CCEEEEECCCCBCSSS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSS
T ss_pred CCceeeeeEcCcCCCC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCccc
Confidence 6899999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCEEEEe
Q 018443 136 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 213 (356)
Q Consensus 136 t~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~~pnivGiK 213 (356)
|+++++++++|+++|||+++++||||+++|++++++||++|+++ +||++||+|++||++++++++.+|+++|||+|||
T Consensus 82 t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK 161 (291)
T 3a5f_A 82 TAASIAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAVSTPIIIYNVPGRTGLNITPGTLKELCEDKNIVAVX 161 (291)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGCCSCEEEEECHHHHSCCCCHHHHHHHTTSTTEEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcCCCEEEEe
Confidence 99999999999999999999999999999999999999999998 7999999999999999999999999999999999
Q ss_pred ecCchh-h---HhhhhCCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHHH
Q 018443 214 ECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPLI 283 (356)
Q Consensus 214 ~s~~d~-~---i~~~~~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~~~l~~l~ 283 (356)
++++|. + +.+..+++|.||+|+|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.+++
T Consensus 162 ~s~gd~~~~~~~~~~~~~~f~v~~G~d~~~~~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~ 240 (291)
T 3a5f_A 162 EASGNISQIAQIKALCGDKLDIYSGNDDQIIPI-LALGGIGVISVLANVIPEDVHNMCELYLNGKVNEALKIQLDSLALT 240 (291)
T ss_dssp ECSCCHHHHHHHHHHHGGGSEEEESCGGGHHHH-HHTTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHTHHHH
T ss_pred CCCCCHHHHHHHHHhcCCCeEEEeCcHHHHHHH-HHCCCCEEEecHHHhcHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 999983 3 3333467899999999988875 8999999999999999999999986 465 678999999999
Q ss_pred HHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 018443 284 EWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGR 333 (356)
Q Consensus 284 ~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~gl 333 (356)
+.++..+++..+|++|+++|++.+.+|+|+.+++++++++++++++++|+
T Consensus 241 ~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~ 290 (291)
T 3a5f_A 241 NALFIETNPIPVKTAMNLMNMKVGDLRLPLCEMNENNLEILKKELKAYNL 290 (291)
T ss_dssp HHTTSSSTTHHHHHHHHHTTCCCCCCCTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHhcCCCHHHHHHHHHHhCCCCCCcCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 98887778999999999999988999999999999999999999999875
No 17
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=2.9e-68 Score=509.15 Aligned_cols=277 Identities=35% Similarity=0.555 Sum_probs=261.4
Q ss_pred cCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCC
Q 018443 56 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 135 (356)
Q Consensus 56 ~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~s 135 (356)
++|++++++|||+ ||+||+++++++++|+++.|++|++++|||||+++||.+||+++++.+++.+++|+|||+|+|+++
T Consensus 2 ~~Gv~~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~ 80 (294)
T 2ehh_A 2 FQGSIVALITPFK-EGEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNA 80 (294)
T ss_dssp CCEEEEECCCCEE-TTEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSC
T ss_pred CCceeeeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCC
Confidence 6899999999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh-cCCCEEEE
Q 018443 136 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA-QSPNLAGV 212 (356)
Q Consensus 136 t~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La-~~pnivGi 212 (356)
|+++++++++|+++|||++|++||||+++|++++++||++|+++ +||++||+|++||++++++++.+|+ ++|||+||
T Consensus 81 t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgi 160 (294)
T 2ehh_A 81 THEAVHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLASECENIVAS 160 (294)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHHhhCCCEEEE
Confidence 99999999999999999999999999999999999999999997 7999999999999999999999999 89999999
Q ss_pred eecCchh-h---HhhhhCCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHH
Q 018443 213 KECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPL 282 (356)
Q Consensus 213 K~s~~d~-~---i~~~~~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~~~l~~l 282 (356)
|++++|. + +.+..+++|.||+|+|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.++
T Consensus 161 Kds~gd~~~~~~~~~~~~~~f~v~~G~d~~~~~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l 239 (294)
T 2ehh_A 161 KESTPNMDRISEIVKRLGESFSVLSGDDSLTLPM-MALGAKGVISVANNVMPREVKELIRAALEGDFRRAREIHYYLHDL 239 (294)
T ss_dssp EECCSCHHHHHHHHHHHCTTSEEEESSGGGHHHH-HHTTCCEEEESGGGTCHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHHhcCCCeEEEECcHHHHHHH-HHCCCCEEEeCHHHhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 9999983 3 3344567999999999998875 8999999999999999999999986 465 67899999999
Q ss_pred HHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCcc
Q 018443 283 IEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGRE 334 (356)
Q Consensus 283 ~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~gl~ 334 (356)
++.++..+++..+|++|+++|++.+.+|+|+.+++++++++++++++++++.
T Consensus 240 ~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~~ 291 (294)
T 2ehh_A 240 FKVLFIETNPIPVKTACWMLGMCEKEFRLPLTEMSPENENKLREVLKKYNLP 291 (294)
T ss_dssp HHHTTSSSTTHHHHHHHHHTTSSCSCCCTTCCCCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHhcCCCHHHHHHHHHHcCCCCCCcCCCCCCCCHHHHHHHHHHHHHhCcc
Confidence 9988877789999999999999889999999999999999999999998753
No 18
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=100.00 E-value=4.6e-68 Score=507.54 Aligned_cols=276 Identities=21% Similarity=0.315 Sum_probs=258.9
Q ss_pred ccCceeEeeecccCCCCCCCHHHHHHHHHHHHH-CCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Q 018443 55 KALRLITAIKTPYLPDGRFDLEAYDDLVNMQIV-NGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGS 133 (356)
Q Consensus 55 ~~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~-~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~ 133 (356)
+++|++++++|||++||+||+++++++++|+++ .|++|++++|||||+++||.+||+++++.+++.+++|+|||+|+|+
T Consensus 3 ~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~ 82 (293)
T 1f6k_A 3 DLKGIFSALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGS 82 (293)
T ss_dssp CCCEEEEECCCCBCTTSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCC
T ss_pred CCCceEEeeEcCCCCCCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCC
Confidence 479999999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCEEE
Q 018443 134 NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAG 211 (356)
Q Consensus 134 ~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~~pnivG 211 (356)
++|+++++++++|+++|||+++++||||++++++++++||++|+++ .||++||+|++||++++++++.+|+++|||+|
T Consensus 83 ~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvg 162 (293)
T 1f6k_A 83 VNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETGSNMIVYSIPFLTGVNMGIEQFGELYKNPKVLG 162 (293)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCHHHHHHHHTSTTEEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECccccCcCCCHHHHHHHhcCCCEEE
Confidence 9999999999999999999999999999999999999999999997 79999999999999999999999999999999
Q ss_pred EeecCchh-hHhhh--hCCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHH
Q 018443 212 VKECVGND-RVEHY--TGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPL 282 (356)
Q Consensus 212 iK~s~~d~-~i~~~--~~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~~~l~~l 282 (356)
||++++|. ++.++ ..++|.||+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.++
T Consensus 163 iK~s~gd~~~~~~~~~~~~~f~v~~G~d~~~~~~-l~~G~~G~is~~~n~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l 241 (293)
T 1f6k_A 163 VKFTAGDFYLLERLKKAYPNHLIWAGFDEMMLPA-ASLGVDGAIGSTFNVNGVRARQIFELTKAGKLKEALEIQHVTNDL 241 (293)
T ss_dssp EEECSCCHHHHHHHHHHCTTSEEEECCGGGHHHH-HHTTCSEEEESTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHhCCCeEEEECcHHHHHHH-HHCCCcEEEeCHHHhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 99999983 33322 246899999999988765 8999999999999999999999986 465 67899999999
Q ss_pred HHHHhcCCChHHHHHHHHHcCCCCCCCCCCC-CCCCHHHHHHHHHHHHHc
Q 018443 283 IEWLFQEPNPIPLNTALAQLGVVRPVFRLPY-VPLPQEKRAEFVNLVNQI 331 (356)
Q Consensus 283 ~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl-~~l~~~~~~~l~~~l~~~ 331 (356)
++.++..+++..+|++|+++|++.+.+|+|+ .+++++++++|+++++++
T Consensus 242 ~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~~l~~~~~~~l~~~l~~~ 291 (293)
T 1f6k_A 242 IEGILANGLYLTIKELLKLEGVDAGYCREPMTSKATAEQVAKAKDLKAKF 291 (293)
T ss_dssp HHHHHHHCHHHHHHHHHHHTTCCCBCCCTTSCCSCCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCHHHHHHHHHHcCCCCCCcCCCCCCCCCHHHHHHHHHHHHHh
Confidence 9988766778999999999999889999999 999999999999999874
No 19
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=100.00 E-value=6.8e-68 Score=505.46 Aligned_cols=274 Identities=36% Similarity=0.579 Sum_probs=258.8
Q ss_pred cCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCC
Q 018443 56 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 135 (356)
Q Consensus 56 ~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~s 135 (356)
++|++++++|||+ ||+||+++++++++|++++|++|++++|||||+++||.+||+++++.+++++++|+|||+|+|+++
T Consensus 2 ~~Gv~~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~ 80 (289)
T 2yxg_A 2 FKGVYPAIITPFK-NKEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNC 80 (289)
T ss_dssp CCEEEEBCCCCEE-TTEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSS
T ss_pred CCceeeeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCC
Confidence 6899999999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh-cCCCEEEE
Q 018443 136 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA-QSPNLAGV 212 (356)
Q Consensus 136 t~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La-~~pnivGi 212 (356)
|+++++++++|+++|||+++++||||+++|++++++||++|+++ +||++||+|++||++++++++.+|+ ++|||+||
T Consensus 81 t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgi 160 (289)
T 2yxg_A 81 TEEAIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESINLPIVLYNVPSRTAVNLEPKTVKLLAEEYSNISAV 160 (289)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHHhCCCEEEE
Confidence 99999999999999999999999999999999999999999997 7999999999999999999999999 89999999
Q ss_pred eecCchh-hH---hhhhCCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHH
Q 018443 213 KECVGND-RV---EHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPL 282 (356)
Q Consensus 213 K~s~~d~-~i---~~~~~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~~~l~~l 282 (356)
|++++|. ++ .+.. +|.||+|+|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.++
T Consensus 161 K~s~gd~~~~~~~~~~~--~f~v~~G~d~~~~~~-l~~G~~G~is~~~n~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l 237 (289)
T 2yxg_A 161 KEANPNLSQVSELIHDA--KITVLSGNDELTLPI-IALGGKGVISVVANIVPKEFVEMVNYALEGDFEKAREIHYKLFPL 237 (289)
T ss_dssp EECCSCTHHHHHHHHHT--CSEEEESCGGGHHHH-HHTTCCEEEESGGGTCHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHHhC--CeEEEECcHHHHHHH-HHCCCCEEEeChhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 9999983 33 3333 899999999988875 8999999999999999999999986 465 67899999999
Q ss_pred HHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 018443 283 IEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGR 333 (356)
Q Consensus 283 ~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~gl 333 (356)
++.++..+++..+|++|+++|++.+.+|+|+.+++++++++++++++++|+
T Consensus 238 ~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~ 288 (289)
T 2yxg_A 238 MKAMFIETNPIPVKTALNMMGRPAGELRLPLCEMSEEHKKILENVLKDLGL 288 (289)
T ss_dssp HHHTTSSSTTHHHHHHHHHTTCSCCCCCTTCCCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHhcCCCHHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 998887788999999999999988999999999999999999999999875
No 20
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=100.00 E-value=7.5e-68 Score=508.86 Aligned_cols=276 Identities=35% Similarity=0.569 Sum_probs=260.1
Q ss_pred cCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCC
Q 018443 56 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 135 (356)
Q Consensus 56 ~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~s 135 (356)
+.|++++++|||+ ||+||+++++++++|+++.|++|++++|||||+++||.+||+++++.+++.+++|+|||+|+|+++
T Consensus 14 ~~Gv~~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~s 92 (306)
T 1o5k_A 14 FRGVGTAIVTPFK-NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNS 92 (306)
T ss_dssp CSEEEEECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSC
T ss_pred cCCeeeeeecCcC-CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCcc
Confidence 7999999999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh-cCCCEEEE
Q 018443 136 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA-QSPNLAGV 212 (356)
Q Consensus 136 t~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La-~~pnivGi 212 (356)
|+++++++++|+++|||+++++||||+++|++++++||++|+++ +||++||+|++||++++++++.+|+ ++|||+||
T Consensus 93 t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgi 172 (306)
T 1o5k_A 93 TEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIAADLKNVVGI 172 (306)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHHhCCCEEEE
Confidence 99999999999999999999999999999999999999999997 7999999999999999999999999 89999999
Q ss_pred eecCchh-h---HhhhhCC---CeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHH
Q 018443 213 KECVGND-R---VEHYTGN---GIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKL 279 (356)
Q Consensus 213 K~s~~d~-~---i~~~~~~---~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~~~l 279 (356)
|++++|. + +.+..++ +|.||+|+|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++
T Consensus 173 Kdssgd~~~~~~~~~~~~~~~~~f~v~~G~d~~~l~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l 251 (306)
T 1o5k_A 173 XEANPDIDQIDRTVSLTKQARSDFMVWSGNDDRTFYL-LCAGGDGVISVVSNVAPKQMVELCAEYFSGNLEKSREVHRKL 251 (306)
T ss_dssp EECCCCHHHHHHHHHHHHHHCTTCEEEESSGGGHHHH-HHHTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHhcCCCCCcEEEEECcHHHHHHH-HHCCCCEEEecHHHhhHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 9999983 3 3333344 899999999988875 8999999999999999999999986 465 67899999
Q ss_pred HHHHHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 018443 280 FPLIEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGR 333 (356)
Q Consensus 280 ~~l~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~gl 333 (356)
.++++.++..+++..+|++|+++|++.+.+|+|+.+++++++++++++++++|+
T Consensus 252 ~~l~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~ 305 (306)
T 1o5k_A 252 RPLMKALFVETNPIPVKAALNLMGFIENELRLPLVPASEKTVELLRNVLKESGL 305 (306)
T ss_dssp HHHHHHTTSSSTTHHHHHHHHHTTSSCCCCCTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhcCCCHHHHHHHHHHcCCCCCCcCCCCCCCCHHHHHHHHHHHHhcCC
Confidence 999998887788999999999999988999999999999999999999999875
No 21
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=100.00 E-value=1e-67 Score=504.99 Aligned_cols=276 Identities=34% Similarity=0.523 Sum_probs=260.8
Q ss_pred cCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCC
Q 018443 56 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 135 (356)
Q Consensus 56 ~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~s 135 (356)
++|++++++||| +||+||+++++++++|+++.|++|++++|||||+++||.+||+++++.+++.+++|+|||+|+|+++
T Consensus 2 ~~Gv~~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~ 80 (292)
T 2vc6_A 2 FEGSITALVTPF-ADDRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNS 80 (292)
T ss_dssp CCEEEEECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSS
T ss_pred CCcEEEeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCcc
Confidence 589999999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc-CCCEEEE
Q 018443 136 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ-SPNLAGV 212 (356)
Q Consensus 136 t~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~-~pnivGi 212 (356)
|+++++++++|+++|||++|++||||+++|++++++||++|+++ +||++||+|++||++++++++.+|++ +|||+|+
T Consensus 81 t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgi 160 (292)
T 2vc6_A 81 TAEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFEDCPNVKGV 160 (292)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHhhCCCEEEE
Confidence 99999999999999999999999999999999999999999997 79999999999999999999999998 9999999
Q ss_pred eecCchh-h---HhhhhCCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHH
Q 018443 213 KECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPL 282 (356)
Q Consensus 213 K~s~~d~-~---i~~~~~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~~~l~~l 282 (356)
|++++|. + +.+..+++|.||+|+|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.++
T Consensus 161 K~s~gd~~~~~~~~~~~~~~f~v~~G~d~~~~~~-l~~G~~G~is~~~n~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l 239 (292)
T 2vc6_A 161 XDATGNLLRPSLERMACGEDFNLLTGEDGTALGY-MAHGGHGCISVTANVAPALCADFQQACLNGDFAAALKLQDRLMPL 239 (292)
T ss_dssp EECSCCTHHHHHHHHHSCTTSEEEESCGGGHHHH-HHTTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ecCCCCHHHHHHHHHHcCCCEEEEECchHHHHHH-HHcCCCEEEecHHHhCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 9999983 3 3344567899999999988875 8999999999999999999999986 565 67899999999
Q ss_pred HHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 018443 283 IEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGR 333 (356)
Q Consensus 283 ~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~gl 333 (356)
++.++..+++..+|++|+++|++.+.+|+|+.+++++++++++++++++|+
T Consensus 240 ~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~ 290 (292)
T 2vc6_A 240 HRALFLETNPAGAKYALQRLGRMRGDLRLPLVTISPSFQEEIDDAMRHAGI 290 (292)
T ss_dssp HHHTTSSSTTHHHHHHHHHTTSSCCCCCTTCCCCCHHHHHHHHHHHHHTTS
T ss_pred HHHHhcCCCHHHHHHHHHHcCCCCCCcCCCCCCCCHHHHHHHHHHHHhcCc
Confidence 998887788999999999999988999999999999999999999999875
No 22
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=100.00 E-value=7.6e-68 Score=505.78 Aligned_cols=276 Identities=30% Similarity=0.492 Sum_probs=259.3
Q ss_pred cCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCC
Q 018443 56 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 135 (356)
Q Consensus 56 ~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~s 135 (356)
++|++++++|||++| +||+++++++++|+++.|++|++++|||||+++||.+||+++++.+++.+++|+|||+|+|+++
T Consensus 4 ~~Gi~~a~vTPf~~d-~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~ 82 (292)
T 3daq_A 4 FEGVGVALTTPFTNN-KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTND 82 (292)
T ss_dssp CCEEEEECCCCEETT-EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSC
T ss_pred CCeEEEeeecCcCCC-CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCccc
Confidence 799999999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCEEEEe
Q 018443 136 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 213 (356)
Q Consensus 136 t~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~~pnivGiK 213 (356)
|+++++++++|+++|||++|++||||++++++++++||++|+++ +||++||+|++||++++++++.+|+++|||+|||
T Consensus 83 t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK 162 (292)
T 3daq_A 83 TEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQHPYIVALK 162 (292)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcCCCEEEEE
Confidence 99999999999999999999999999999999999999999997 7999999999999999999999999999999999
Q ss_pred ecCchh-hH---hhhhCC-CeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cC-CcHHHHHHHHHHHH
Q 018443 214 ECVGND-RV---EHYTGN-GIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GG-KNPSLNTKLFPLIE 284 (356)
Q Consensus 214 ~s~~d~-~i---~~~~~~-~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag-~a~~l~~~l~~l~~ 284 (356)
++++|. ++ .+..++ +|.||+|.|+++++. +..|++|+||+++|++|+.++++|+ +| |..+..+++.++++
T Consensus 163 ~ssgd~~~~~~~~~~~~~~~f~v~~G~d~~~~~~-l~~G~~G~is~~~n~~P~~~~~l~~a~~~g~d~~~A~~~l~~l~~ 241 (292)
T 3daq_A 163 DATNDFEYLEEVKKRIDTNSFALYSGNDDNVVEY-YQRGGQGVISVIANVIPKEFQALYDAQQSGLDIQDQFKPIGTLLS 241 (292)
T ss_dssp ECCCCHHHHHHHHTTSCTTTSEEEESCGGGHHHH-HHTTCCEEEESGGGTCHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred eCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHH-HhcCCCEEEeCHHHhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 999983 33 333455 899999999998875 8999999999999999999999986 58 75444449999999
Q ss_pred HHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 018443 285 WLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGR 333 (356)
Q Consensus 285 ~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~gl 333 (356)
.++..+++..+|++|+++|++.+.+|+|+.+++++++++|+++++++|+
T Consensus 242 ~~~~~~~~~~~K~~l~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~l 290 (292)
T 3daq_A 242 ALSVDINPIPIKALTSYLGFGNYELRLPLVSLEDTDTKVLREAYDTFKA 290 (292)
T ss_dssp HHTTSSTTTTHHHHHHHTTSSBSCCCTTCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHhccCCcHHHHHHHHHcCCCCCCcCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 9888888888999999999988999999999999999999999999875
No 23
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.6e-67 Score=511.51 Aligned_cols=278 Identities=21% Similarity=0.230 Sum_probs=259.7
Q ss_pred cCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCC
Q 018443 56 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 135 (356)
Q Consensus 56 ~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~s 135 (356)
++|++++++|||++||+||+++++++++|+++.|++||+++|||||+++||.+||+++++.+++.+++|+|||+|+|+++
T Consensus 35 ~~Gv~~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~s 114 (332)
T 2r8w_A 35 FKGLSAFPITPADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALR 114 (332)
T ss_dssp GCEEEECCCCCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSS
T ss_pred cCCeeEEeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCEEEEe
Q 018443 136 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 213 (356)
Q Consensus 136 t~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~~pnivGiK 213 (356)
|+++++++++|+++|||+++++||||++++++++++||++|+++ +||++||+|++||++++++++.+|+++|||+|||
T Consensus 115 t~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~pnIvgiK 194 (332)
T 2r8w_A 115 TDEAVALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRLAYIPNIRAIK 194 (332)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHHHHHHHTSTTEEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHcCCCEEEEE
Confidence 99999999999999999999999999999999999999999997 7999999999999999999999999999999999
Q ss_pred ecCch----h-hHh---hhhCCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHH
Q 018443 214 ECVGN----D-RVE---HYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKL 279 (356)
Q Consensus 214 ~s~~d----~-~i~---~~~~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~~~l 279 (356)
++++| . ++. +..+++|.||+|.|.++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++
T Consensus 195 dssgd~~~~~~~~~~l~~~~~~~f~v~~G~D~~~l~~-l~~G~~G~is~~anv~P~~~~~l~~a~~~Gd~~~A~~l~~~l 273 (332)
T 2r8w_A 195 MPLPADADYAGELARLRPKLSDDFAIGYSGDWGCTDA-TLAGGDTWYSVVAGLLPVPALQLMRAAQAGNAEEAKRLDATF 273 (332)
T ss_dssp ECCCTTCCHHHHHHHHTTTSCTTCEEEECCHHHHHHH-HHTTCSEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred eCCCCchhHHHHHHHHHHhcCCCEEEEeCchHHHHHH-HHCCCCEEEeCHHHhCHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 99998 4 333 33456899999999988765 8999999999999999999999986 465 67899999
Q ss_pred HHHHHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCcc
Q 018443 280 FPLIEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGRE 334 (356)
Q Consensus 280 ~~l~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~gl~ 334 (356)
.++++.++..+++..+|++|+++|++.+.+|+|+.+++++++++|++++++++..
T Consensus 274 ~~l~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~~ 328 (332)
T 2r8w_A 274 QPLWALFKEFGSIRVIYAAANILSLTVSEPPRPILPLTSAERQRVEEALEALSAL 328 (332)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHTTSCCCCCCTTSCCCCHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHhcCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcchh
Confidence 9999877555678899999999999889999999999999999999999998753
No 24
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=100.00 E-value=1.7e-67 Score=505.71 Aligned_cols=276 Identities=23% Similarity=0.371 Sum_probs=259.1
Q ss_pred ccCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCC
Q 018443 55 KALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN 134 (356)
Q Consensus 55 ~~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~ 134 (356)
+++|++++++|||++||+||+++++++++|+++.|++|++++|||||+++||.+||+++++.+++.+++|+|||+|+|++
T Consensus 11 ~~~Gv~~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~ 90 (303)
T 2wkj_A 11 NLRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCV 90 (303)
T ss_dssp GGCSEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCS
T ss_pred CCCceEEeeEcCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc---CCeEEEeCCCCCCCCCCHHHHHHHhcCCCEEE
Q 018443 135 STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM---GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAG 211 (356)
Q Consensus 135 st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~---~PiilYn~P~~tG~~ls~~~l~~La~~pnivG 211 (356)
+|+++++++++|+++|||++|++||||+++|++++++||++|+++ +||++||+|++||++++++++.+|+++|||+|
T Consensus 91 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvg 170 (303)
T 2wkj_A 91 STAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGA 170 (303)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCCCHHHHHHHHTSTTEEE
T ss_pred CHHHHHHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCCCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEE
Confidence 999999999999999999999999999999999999999999986 69999999999999999999999999999999
Q ss_pred EeecCchh-h---HhhhhCCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHH
Q 018443 212 VKECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFP 281 (356)
Q Consensus 212 iK~s~~d~-~---i~~~~~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~~~l~~ 281 (356)
||++++|. + +.+. .++|.||+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.+
T Consensus 171 iK~s~gd~~~~~~~~~~-~~~f~v~~G~d~~~~~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~ 248 (303)
T 2wkj_A 171 LXQTSGDLYQMEQIRRE-HPDLVLYNGYDNIFASG-LLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNK 248 (303)
T ss_dssp EEECCCCHHHHHHHHHH-CTTCEEEECCGGGHHHH-HHHTCCEEEETTHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHh-CCCeEEEeCcHHHHHHH-HHCCCCEEEeCHHHhCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 99999983 3 3333 56899999999998775 8999999999999999999999986 465 6789999999
Q ss_pred HHHHHhcCCChHHHHHHHHHcCCCCC-CCCCCCCCCCHHHHHHHHHHHHHcC
Q 018443 282 LIEWLFQEPNPIPLNTALAQLGVVRP-VFRLPYVPLPQEKRAEFVNLVNQIG 332 (356)
Q Consensus 282 l~~~~~~~~~~~~~K~al~~~G~~~g-~~R~Pl~~l~~~~~~~l~~~l~~~g 332 (356)
+++.++..+++..+|++|+++|++.+ .+|+|+.+++++++++|+++++++.
T Consensus 249 l~~~~~~~~~~~~~K~al~~~G~~~g~~~R~Pl~~l~~~~~~~l~~~l~~~~ 300 (303)
T 2wkj_A 249 VIDLLIKTGVFRGLKTVLHYMDVVSVPLCRKPFGPVDEKYLPELKALAQQLM 300 (303)
T ss_dssp HHHHHHHHCHHHHHHHHHHHTTSCSSCCCCTTSCCCCGGGHHHHHHHHHHHH
T ss_pred HHHHHhccCCHHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 99988777788999999999999888 9999999999999999999998753
No 25
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=100.00 E-value=2e-67 Score=512.76 Aligned_cols=277 Identities=25% Similarity=0.402 Sum_probs=261.1
Q ss_pred cCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCC
Q 018443 56 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 135 (356)
Q Consensus 56 ~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~s 135 (356)
++|++++++|||++||+||+++++++++|+++.|++||+++|||||+++||.+||+++++.+++.+++|+|||+|||+++
T Consensus 32 ~~Gv~~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~s 111 (343)
T 2v9d_A 32 FTGIIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTN 111 (343)
T ss_dssp SCEECCEECCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSC
T ss_pred cCCeEEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh-cCCCEEEE
Q 018443 136 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA-QSPNLAGV 212 (356)
Q Consensus 136 t~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La-~~pnivGi 212 (356)
|+++++++++|+++|||++|++||||+++|++++++||++|+++ +|||+||+|++||++++++++.+|+ ++|||+||
T Consensus 112 t~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~~pnIvgi 191 (343)
T 2v9d_A 112 ARETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSNIIGI 191 (343)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHHHCTTEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHHHhCCCEEEE
Confidence 99999999999999999999999999999999999999999997 7999999999999999999999999 99999999
Q ss_pred eecCchh-h---HhhhhC---CCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHH
Q 018443 213 KECVGND-R---VEHYTG---NGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKL 279 (356)
Q Consensus 213 K~s~~d~-~---i~~~~~---~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~~~l 279 (356)
|++++|. + +.+..+ ++|.||+|+|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++
T Consensus 192 Kdssgd~~~~~~l~~~~~~~~~~f~v~~G~D~~~l~~-l~~Ga~G~is~~anv~P~~~~~l~~a~~~Gd~~~A~~l~~~l 270 (343)
T 2v9d_A 192 KDTIDSVAHLRSMIHTVKGAHPHFTVLCGYDDHLFNT-LLLGGDGAISASGNFAPQVSVNLLKAWRDGDVAKAAGYHQTL 270 (343)
T ss_dssp EECCSCHHHHHHHHHHHHHHCTTCEEEESSGGGHHHH-HHTTCCEECCGGGTTCHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHHhcCCCCCCEEEEECcHHHHHHH-HHCCCCEEEeCHHHhHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 9999983 3 333334 7899999999988875 8999999999999999999999986 465 67899999
Q ss_pred HHHHHHHhcCCC-hHHHHHHHHHcCCCC-CCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 018443 280 FPLIEWLFQEPN-PIPLNTALAQLGVVR-PVFRLPYVPLPQEKRAEFVNLVNQIGR 333 (356)
Q Consensus 280 ~~l~~~~~~~~~-~~~~K~al~~~G~~~-g~~R~Pl~~l~~~~~~~l~~~l~~~gl 333 (356)
.++++.++..++ +..+|++|+++|++. +.+|+|+.+++++++++|+++++++++
T Consensus 271 ~~l~~~~~~~~~~~~~iK~al~~~G~~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~ 326 (343)
T 2v9d_A 271 LQIPQMYQLDTPFVNVIKEAIVLCGRPVSTHVLPPASPLDEPRKAQLKTLLQQLKL 326 (343)
T ss_dssp HHGGGGGGGSSSCHHHHHHHHHHTTCCCCCCCCTTSCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCChHHHHHHHHHHCCCCCCCCcCCCCCCCCHHHHHHHHHHHHHhCc
Confidence 999988877777 899999999999987 999999999999999999999999875
No 26
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1e-65 Score=491.47 Aligned_cols=271 Identities=22% Similarity=0.349 Sum_probs=255.7
Q ss_pred CceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCH
Q 018443 57 LRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNST 136 (356)
Q Consensus 57 ~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st 136 (356)
+|++++++|||++||+||+++++++++|+++.|++|++++|||||+++||.+||+++++.+++.+++|+|||+|+|+++|
T Consensus 5 ~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t 84 (294)
T 3b4u_A 5 FGLSAALTTPFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSI 84 (294)
T ss_dssp CEEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSH
T ss_pred CcEEEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCC-CCHHHHHHHHHHHHhc-----CCeEEEeCCCCCCCCCCHHHHHHHh-cCCC-
Q 018443 137 REAIHATEQGFAVGMHAALHINPYYGK-TSLEGLISHFDSVLSM-----GPTIIYNVPSRTGQDIPPRVIHTMA-QSPN- 208 (356)
Q Consensus 137 ~~ai~lar~a~~~Gadavlv~pP~y~~-~s~~~l~~y~~~va~~-----~PiilYn~P~~tG~~ls~~~l~~La-~~pn- 208 (356)
+++++++++|+++|||++|++||||++ ++++++++||++|+++ +||++||+|++||++++++++.+|+ ++||
T Consensus 85 ~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La~~~pn~ 164 (294)
T 3b4u_A 85 EDAADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLKAAFPGI 164 (294)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHHHHCTTT
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHHHhCCCc
Confidence 999999999999999999999999999 9999999999999984 5999999999999999999999999 9999
Q ss_pred EEEEeecCchh-h---HhhhhCCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHHcCCcHHHHHHHHHHHH
Q 018443 209 LAGVKECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMFGGKNPSLNTKLFPLIE 284 (356)
Q Consensus 209 ivGiK~s~~d~-~---i~~~~~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~ag~a~~l~~~l~~l~~ 284 (356)
|+|||++++|. + +.+..+ +|.||+|+|+++++. +..|++|+||+++|++|+.++++|+ + +++|+++.++++
T Consensus 165 ivgiKds~gd~~~~~~~~~~~~-~f~v~~G~d~~~l~~-l~~G~~G~is~~~n~~P~~~~~l~~--~-~~l~~~l~~l~~ 239 (294)
T 3b4u_A 165 VTGVKDSSGNWSHTERLLKEHG-DLAILIGDERDLARG-VRLGGQGAISGVANFLTQEVRAMAV--D-GKDDPRIVDLVV 239 (294)
T ss_dssp EEEEEECCCCHHHHHHHHHHHT-TSEEEECCHHHHHHH-HHTTCCEEEESGGGTCHHHHHHHHT--T-CCCCHHHHHHHH
T ss_pred EEEEEECCCCHHHHHHHHHhCC-CeEEEEccHHHHHHH-HHCCCCEEEeCHHHhCHHHHHHHHH--H-HHHHHHHHHHHH
Confidence 99999999983 3 333345 899999999988875 8999999999999999999999999 3 789999999999
Q ss_pred HHhcCCChHHHHHHHHH-cC-CCCCCCCCCCCCCCHHHHHHHHHHHHHcC
Q 018443 285 WLFQEPNPIPLNTALAQ-LG-VVRPVFRLPYVPLPQEKRAEFVNLVNQIG 332 (356)
Q Consensus 285 ~~~~~~~~~~~K~al~~-~G-~~~g~~R~Pl~~l~~~~~~~l~~~l~~~g 332 (356)
.++..+++..+|++|++ +| ++.+.+|+|+.+++++++++|+++++++.
T Consensus 240 ~~~~~~~~~~~K~al~~~~G~~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~ 289 (294)
T 3b4u_A 240 ELLKFPVTPAVKVLVSHTTGETIWSDVRAPLVAISPEDRRQIEGAFDALF 289 (294)
T ss_dssp HHTTSCHHHHHHHHHHHHHCCGGGGCCCTTSCCCCHHHHHHHHHHHHHHH
T ss_pred HHhccCCHHHHHHHHHHhCCCCCCCCcCCCCCCCCHHHHHHHHHHHHHHH
Confidence 88888888999999999 99 67789999999999999999999998863
No 27
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=100.00 E-value=3.2e-65 Score=492.18 Aligned_cols=276 Identities=20% Similarity=0.287 Sum_probs=255.4
Q ss_pred cccCceeEeeeccc-CCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecC
Q 018443 54 IKALRLITAIKTPY-LPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTG 132 (356)
Q Consensus 54 ~~~~Gvi~al~TPf-~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg 132 (356)
|+++|++++++||| ++||+||+++++++++|+++.|++|++++|||||+++||.+||+++++.+++.+++|+|||+|+|
T Consensus 10 ~~~~Gv~~a~vTPF~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg 89 (314)
T 3d0c_A 10 KRFSTISGINIVPFLEGTREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIG 89 (314)
T ss_dssp GGGSSEEECCCCCBCTTTCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC
T ss_pred ccCCceEEeeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCC
Confidence 35799999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCEE
Q 018443 133 SNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLA 210 (356)
Q Consensus 133 ~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~~pniv 210 (356)
+ ||+++++++++|+++|||+++++||||++++++++++||++|+++ +||++|| +||+ ++++++.+|+++|||+
T Consensus 90 ~-st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn---~tg~-l~~~~~~~La~~pnIv 164 (314)
T 3d0c_A 90 Y-SVDTAIELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALDAPSIIYF---KDAH-LSDDVIKELAPLDKLV 164 (314)
T ss_dssp S-SHHHHHHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSSSCEEEEE---CCTT-SCTHHHHHHTTCTTEE
T ss_pred c-CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEe---CCCC-cCHHHHHHHHcCCCEE
Confidence 9 999999999999999999999999999999999999999999997 7999999 8999 9999999999999999
Q ss_pred EEeecCchh-h---HhhhhCC--CeEEEecCcc-hhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHHH
Q 018443 211 GVKECVGND-R---VEHYTGN--GIVVWSGNDD-QCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNT 277 (356)
Q Consensus 211 GiK~s~~d~-~---i~~~~~~--~~~v~~G~d~-~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~~ 277 (356)
|||++++|. + +.+..++ +|.||+|+|+ ++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+
T Consensus 165 giKdssgd~~~~~~~~~~~~~~~~f~v~~G~d~~~~~~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~ 243 (314)
T 3d0c_A 165 GIKYAINDIQRVTQVMRAVPKSSNVAFICGTAEKWAPFF-YHAGAVGFTSGLVNVFPQKSFALLEALEEGNQEKIWDVWE 243 (314)
T ss_dssp EEEECCCCHHHHHHHHHHSCGGGCCEEEETTHHHHHHHH-HHHTCCEEEESGGGTCHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHhcCCCCCEEEEEeCcHHHHHHH-HHcCCCEEEecHHHhhHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 999999984 3 3333455 8999999999 77765 8999999999999999999999986 465 678999
Q ss_pred HHHHHHHHHhcC-CC--hHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCccc
Q 018443 278 KLFPLIEWLFQE-PN--PIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGREN 335 (356)
Q Consensus 278 ~l~~l~~~~~~~-~~--~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~gl~~ 335 (356)
++.++++.++.. ++ +..+|++|+++|++.+.+|+|+.++++++++++++.++++++..
T Consensus 244 ~l~~l~~~~~~~~~~~~~~~iK~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~~~ 304 (314)
T 3d0c_A 244 DVVPFEDLRAKHNNGNNVVIIKEAMEQLGLRAGVTREPVNPLSPNDRLELEELLKSWNTQE 304 (314)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHTTCCCCCCCTTCCSCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhcCCCcHHHHHHHHHHCCCCCCCcCCCCCCCCHHHHHHHHHHHHHhchhh
Confidence 999999877653 33 56789999999998899999999999999999999999987654
No 28
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=100.00 E-value=9.5e-65 Score=487.85 Aligned_cols=275 Identities=19% Similarity=0.309 Sum_probs=253.3
Q ss_pred ccCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCC
Q 018443 55 KALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN 134 (356)
Q Consensus 55 ~~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~ 134 (356)
+++|++++++|||++||+||+++++++++|++++|++|++++|||||+++||.+||+++++.+++.+++|+|||+|+|++
T Consensus 8 ~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~ 87 (309)
T 3fkr_A 8 RHRGIFPVVPTTFADTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHY 87 (309)
T ss_dssp SCCEECCBCCCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCS
T ss_pred CCCceEEeeeCCCCcCCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCC---CCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh-cCCC
Q 018443 135 STREAIHATEQGFAVGMHAALHINPYY---GKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA-QSPN 208 (356)
Q Consensus 135 st~~ai~lar~a~~~Gadavlv~pP~y---~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La-~~pn 208 (356)
+|+++++++++|+++|||+++++|||| ++++|+++++||++|+++ +||++||+|. ||++++++++.+|+ ++||
T Consensus 88 ~t~~ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P~-tg~~l~~~~~~~La~~~pn 166 (309)
T 3fkr_A 88 STQVCAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAPA-SGTALSAPFLARMAREIEQ 166 (309)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECGG-GCCCCCHHHHHHHHHHSTT
T ss_pred hHHHHHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC-CCCCCCHHHHHHHHhhCCC
Confidence 999999999999999999999999999 689999999999999997 7999999997 99999999999999 5999
Q ss_pred EEEEe-ecCchh-hH---hhhhCCCe-EEEecCcch-hHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHH
Q 018443 209 LAGVK-ECVGND-RV---EHYTGNGI-VVWSGNDDQ-CHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSL 275 (356)
Q Consensus 209 ivGiK-~s~~d~-~i---~~~~~~~~-~v~~G~d~~-~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l 275 (356)
|+||| ++++|. ++ .+..+++| .+|+|+|.+ +++ .+..|++|+|+ +|++|+.++++|+ +|| |+++
T Consensus 167 IvgiK~~~~~~~~~~~~~~~~~~~~~~~~~~G~d~~~l~~-~l~~G~~G~i~--~n~~P~~~~~l~~a~~~Gd~~~A~~l 243 (309)
T 3fkr_A 167 VAYFXIETPGAANKLRELIRLGGDAIEGPWDGEEAITLLA-DLHAGATGAMT--GGGFPDGIRPILEAWREGRHDDAYAR 243 (309)
T ss_dssp EEEEEECSSSHHHHHHHHHHHHGGGCCEEEECGGGTTHHH-HHHTTCCEECC--CSSCHHHHHHHHHHHHTTCHHHHHHH
T ss_pred EEEEECCCcchHHHHHHHHHhcCCceeeecCCchHHHHHH-HHHCCCcEEEE--hhhhHHHHHHHHHHHHcCCHHHHHHH
Confidence 99999 677773 33 33345566 689999886 445 48999999995 5999999999987 465 6789
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHcCCC-CCCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 018443 276 NTKLFPLIEWLFQEPNPIPLNTALAQLGVV-RPVFRLPYVPLPQEKRAEFVNLVNQIGR 333 (356)
Q Consensus 276 ~~~l~~l~~~~~~~~~~~~~K~al~~~G~~-~g~~R~Pl~~l~~~~~~~l~~~l~~~gl 333 (356)
|+++.++++.++..+++..+|++|+++|++ .+.+|+|+.+++++++++|++++++++.
T Consensus 244 ~~~l~~l~~~~~~~~~~~~~K~al~~~G~~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~ 302 (309)
T 3fkr_A 244 YQAWLPLINHENRQSGILTAKALMREGGVIASERPRHPMPELHPDTRAELLAIARRLDP 302 (309)
T ss_dssp HHHHHHHHHHHHHTTGGGHHHHHHHHTTSSSCCCCCTTSCCCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhccCCHHHHHHHHHhCCCCCCCCcCCCCCCCCHHHHHHHHHHHHHhhH
Confidence 999999999988888999999999999984 6899999999999999999999999873
No 29
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=100.00 E-value=8.2e-65 Score=485.03 Aligned_cols=268 Identities=24% Similarity=0.285 Sum_probs=252.2
Q ss_pred CceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCH
Q 018443 57 LRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNST 136 (356)
Q Consensus 57 ~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st 136 (356)
+|++++++|||++||+||+++++++++|+++.|++|++++|||||+++||.+||+++++.+++.+++ ||+|+|+++|
T Consensus 1 ~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g---viaGvg~~~t 77 (293)
T 1w3i_A 1 PEIITPIITPFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK---IIFQVGGLNL 77 (293)
T ss_dssp CEEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC---EEEECCCSCH
T ss_pred CCeEEEeeCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC---EEEecCCCCH
Confidence 5899999999999999999999999999999999999999999999999999999999999998877 9999999999
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCC-CCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCEEEEe
Q 018443 137 REAIHATEQGFAVGMHAALHINPYYGK-TSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 213 (356)
Q Consensus 137 ~~ai~lar~a~~~Gadavlv~pP~y~~-~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~~pnivGiK 213 (356)
+++++++++|+++|||++|++||||++ ++++++++||++|+++ +||++||+|++||++++++++.+ +|||+|||
T Consensus 78 ~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~---~pnIvgiK 154 (293)
T 1w3i_A 78 DDAIRLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVSPHPVYLYNYPTATGKDIDAKVAKE---IGCFTGVK 154 (293)
T ss_dssp HHHHHHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHH---HCCEEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEEEECchhhCcCCCHHHHHh---cCCEEEEE
Confidence 999999999999999999999999999 9999999999999997 79999999999999999999999 89999999
Q ss_pred ecCchh----hHhhhhCCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHHH
Q 018443 214 ECVGND----RVEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPLI 283 (356)
Q Consensus 214 ~s~~d~----~i~~~~~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~~~l~~l~ 283 (356)
++++|. ++.+ .+++|.||+|+|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.+++
T Consensus 155 ds~gd~~~~~~~~~-~~~~f~v~~G~d~~~~~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~ 232 (293)
T 1w3i_A 155 DTIENIIHTLDYKR-LNPNMLVYSGSDMLIATV-ASTGLDGNVAAGSNYLPEVTVTIKKLAMERKIDEALKLQFLHDEVI 232 (293)
T ss_dssp ECCSCHHHHHHHHH-HCTTSEEEECCSTTHHHH-HHTTCCEEECGGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred eCCCCHHHHHHHHh-cCCCEEEEEccHHHHHHH-HHcCCCEEEeCHHHhCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 999983 3444 578999999999988875 8999999999999999999999986 465 678999999999
Q ss_pred HHHhcCCC-hHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcC
Q 018443 284 EWLFQEPN-PIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIG 332 (356)
Q Consensus 284 ~~~~~~~~-~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~g 332 (356)
+.++..++ +..+|++|+++|++.+.+|+|+.++++++++++++++++++
T Consensus 233 ~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~ 282 (293)
T 1w3i_A 233 EASRIFGSLSSNYVLTKYFQGYDLGYPRPPIFPLDDEEERQLIKKVEGIR 282 (293)
T ss_dssp HHHHTTCHHHHHHHHHHHHHSSCCBCCCTTSCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCChHHHHHHHHHHcCCCCCCcCCCCCCCCHHHHHHHHHHHHHHH
Confidence 98887766 88999999999998899999999999999999999999875
No 30
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=100.00 E-value=8.8e-65 Score=489.79 Aligned_cols=277 Identities=22% Similarity=0.326 Sum_probs=248.7
Q ss_pred cccCceeEeeecccC-CCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecC
Q 018443 54 IKALRLITAIKTPYL-PDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTG 132 (356)
Q Consensus 54 ~~~~Gvi~al~TPf~-~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg 132 (356)
..++|++++++|||+ +||+||+++++++++|+++.|++||+++|||||+++||.+||+++++.+++.+++|+|||+|+|
T Consensus 9 ~~~~Gv~~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg 88 (318)
T 3qfe_A 9 VPQPGIWCPAVTFFDSKTDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVG 88 (318)
T ss_dssp SCCSEEEEECCCCEETTTTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECC
T ss_pred CCCCCeEEeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC
Confidence 358999999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCCCCC-C-CCHHHHHHHHHHHHhc--CCeEEEeCCCCC-CCCCCHHHHHHHhc-C
Q 018443 133 SNSTREAIHATEQGFAVGMHAALHINPYYG-K-TSLEGLISHFDSVLSM--GPTIIYNVPSRT-GQDIPPRVIHTMAQ-S 206 (356)
Q Consensus 133 ~~st~~ai~lar~a~~~Gadavlv~pP~y~-~-~s~~~l~~y~~~va~~--~PiilYn~P~~t-G~~ls~~~l~~La~-~ 206 (356)
+++|+++++++++|+++|||+++++||||+ + ++++++++||++|+++ +||++||+|++| |++++++++.+|++ +
T Consensus 89 ~~~t~~ai~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~lPiilYn~P~~t~g~~l~~~~~~~La~~~ 168 (318)
T 3qfe_A 89 AHSTRQVLEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSPLPVVIYNFPGVCNGIDLDSDMITTIARKN 168 (318)
T ss_dssp CSSHHHHHHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHCSSCEEEEECCC----CCCCHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCCCCEEEEeCCcccCCCCCCHHHHHHHHhhC
Confidence 999999999999999999999999999776 4 5899999999999997 799999999997 99999999999997 9
Q ss_pred CCEEEEeecCchh-hH---hhhh-CCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHH
Q 018443 207 PNLAGVKECVGND-RV---EHYT-GNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSL 275 (356)
Q Consensus 207 pnivGiK~s~~d~-~i---~~~~-~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l 275 (356)
|||+|||++++|. ++ .+.. +++|.||+|+|+++++. +..|++|+||+++|++|+.+++||+ +|| ++++
T Consensus 169 pnIvgiKdssgd~~~~~~~~~~~~~~~f~v~~G~d~~~l~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l 247 (318)
T 3qfe_A 169 PNVVGVKLTCASVGKITRLAATLPPAAFSVFGGQSDFLIGG-LSVGSAGCIAAFANVFPKTVSKIYELYKAGKVDQAMEL 247 (318)
T ss_dssp TTEEEEEESSCCHHHHHHHHHHSCGGGCEEEESCGGGHHHH-HHTTCCEEECGGGGTCHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCEEEEEeCCCCHHHHHHHHHhcCCCCEEEEEecHHHHHHH-HHCCCCEEEecHHHhhHHHHHHHHHHHHCCCHHHHHHH
Confidence 9999999999983 33 3323 46899999999988875 8999999999999999999999987 465 6789
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHH-----HHcCCCC----CCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 018443 276 NTKLFPLIEWLFQEPNPIPLNTAL-----AQLGVVR----PVFRLPYVPLPQEKRAEFVNLVNQIGR 333 (356)
Q Consensus 276 ~~~l~~l~~~~~~~~~~~~~K~al-----~~~G~~~----g~~R~Pl~~l~~~~~~~l~~~l~~~gl 333 (356)
|+++.++... ...++..+|++| +++|++. +.+|+|+.+++++++++|++++++++.
T Consensus 248 ~~~l~~~~~~--~~~~~~~~K~al~~~~~~~~G~~~~~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~ 312 (318)
T 3qfe_A 248 HRKAALAESP--CKSGIATTKYAAAIFSAKAAGIEDAEEKLRPRKPYDPPSEAAKQEVRKVMAEVAA 312 (318)
T ss_dssp HHHHHHHTCC--C--CHHHHHHHHHHTHHHHTTCTTHHHHTSCSTTSCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH--HhcCCHHHHHHHHhhHHHhCCCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 9999988765 356888999975 6799954 799999999999999999999999864
No 31
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.5e-65 Score=487.82 Aligned_cols=267 Identities=26% Similarity=0.361 Sum_probs=251.7
Q ss_pred eeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHH
Q 018443 59 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTRE 138 (356)
Q Consensus 59 vi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ 138 (356)
+++|++|||++||+||+++++++++|++++ ++|++++|||||+++||.+||+++++.+++ |+|||+|+|++||++
T Consensus 2 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~----rvpviaGvg~~~t~~ 76 (283)
T 2pcq_A 2 ILPPIPTPFDREGRLDEEAFRELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP----RKPFLVGLMEETLPQ 76 (283)
T ss_dssp EECEECCCBCTTCCBCHHHHHHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC----SSCCEEEECCSSHHH
T ss_pred eeeeEeCCCCCCCCcCHHHHHHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh----CCcEEEeCCCCCHHH
Confidence 789999999999999999999999999999 999999999999999999999999999987 899999999999999
Q ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCC-CHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHHHhcCCCEEEEeecCc
Q 018443 139 AIHATEQGFAVGMHAALHINPYYGKT-SLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKECVG 217 (356)
Q Consensus 139 ai~lar~a~~~Gadavlv~pP~y~~~-s~~~l~~y~~~va~~~PiilYn~P~~tG~~ls~~~l~~La~~pnivGiK~s~~ 217 (356)
+++++++|+++|||+++++||||+++ +++++++||++|++.+||++||+|++||++++++++.+|+++|||+|+|++++
T Consensus 77 ai~la~~A~~~Gadavlv~~P~y~~~~~~~~l~~~f~~va~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiKdssg 156 (283)
T 2pcq_A 77 AEGALLEAKAAGAMALLATPPRYYHGSLGAGLLRYYEALAEKMPLFLYHVPQNTKVDLPLEAVEALAPHPNVLGIKDSSG 156 (283)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCTTGGGTTTHHHHHHHHHHHHSCEEEEECHHHHCCCCCHHHHHHHTTSTTEEEEEECSC
T ss_pred HHHHHHHHHhcCCCEEEecCCcCCCCCCHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHhcCCCEEEEEECCC
Confidence 99999999999999999999999999 99999999999999779999999999999999999999999999999999999
Q ss_pred hh----hHhhhhCCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHHHHHHh
Q 018443 218 ND----RVEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPLIEWLF 287 (356)
Q Consensus 218 d~----~i~~~~~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~~~l~~l~~~~~ 287 (356)
|. ++.+ .+++|.||+|+|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.++++.++
T Consensus 157 d~~~~~~~~~-~~~~f~v~~G~d~~~~~~-l~~G~~G~is~~~n~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~~~ 234 (283)
T 2pcq_A 157 DLSRIAFYQA-RLQEFRVYTGHAPTFLGA-LALGAEGGILAAANLAPRAYRALLDHFREGRLAEAQELQKKLFPLGDLLA 234 (283)
T ss_dssp CHHHHHHHHH-HCSSCEEEECCGGGHHHH-HHTTCCEEECGGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHh-cCCCEEEEECcHHHHHHH-HHcCCCEEEeCHHHhCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHh
Confidence 83 3444 567999999999998875 8999999999999999999999986 465 6789999999999777
Q ss_pred cCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHH--HHHHHHHHHcCc
Q 018443 288 QEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKR--AEFVNLVNQIGR 333 (356)
Q Consensus 288 ~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~--~~l~~~l~~~gl 333 (356)
..+++ .+|++|+++|++.+.+|+|+.+++++++ ++++++++++|+
T Consensus 235 ~~~~~-~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~~~l~~~l~~~~~ 281 (283)
T 2pcq_A 235 KGGVP-LLKQALRHLGLPAGYPRPPYPAESPLWERFLPVLEGLKEEGW 281 (283)
T ss_dssp HHHHH-HHHHHHHHTTCCCCCCCTTSCSSCTTHHHHHHHHHHHHHTTC
T ss_pred cCCcH-HHHHHHHHcCCCCCCcCCCCCCCCHHHHHHHHHHHHHHhcCc
Confidence 66678 9999999999988999999999999999 999999999875
No 32
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=100.00 E-value=1.3e-64 Score=482.16 Aligned_cols=266 Identities=23% Similarity=0.291 Sum_probs=250.2
Q ss_pred CceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCH
Q 018443 57 LRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNST 136 (356)
Q Consensus 57 ~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st 136 (356)
+|++++++|||+ ||+||+++++++++|+++.|++|++++|||||+++||.+||+++++.+++.+++ ||+|+|+++|
T Consensus 1 ~Gv~~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g---vi~Gvg~~~t 76 (286)
T 2r91_A 1 MEIVAPVITTFR-GGRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR---VIVQVASLNA 76 (286)
T ss_dssp CEEEEECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS---EEEECCCSSH
T ss_pred CCeEEeEecCcC-CCccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---EEEeeCCCCH
Confidence 589999999999 999999999999999999999999999999999999999999999999999877 9999999999
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCC-CCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCEEEEe
Q 018443 137 REAIHATEQGFAVGMHAALHINPYYGK-TSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 213 (356)
Q Consensus 137 ~~ai~lar~a~~~Gadavlv~pP~y~~-~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~~pnivGiK 213 (356)
+++++++++|+++|||++|++||||++ ++++++++||++|+++ +||++||+|++||++++++++.+ +|||+|||
T Consensus 77 ~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~---~pnivgiK 153 (286)
T 2r91_A 77 DEAIALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVSIPVFLYNYPAAVGRDVDARAAKE---LGCIRGVK 153 (286)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSSCCCHHHHHH---HSCEEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeChhhcCCCCCHHHHHh---cCCEEEEE
Confidence 999999999999999999999999999 9999999999999997 79999999999999999999999 89999999
Q ss_pred ecCchh-h---HhhhhCCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHHH
Q 018443 214 ECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPLI 283 (356)
Q Consensus 214 ~s~~d~-~---i~~~~~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~~~l~~l~ 283 (356)
++++|. + +.+ .+++|.||+|+|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.+++
T Consensus 154 ds~gd~~~~~~~~~-~~~~f~v~~G~d~~~~~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~ 231 (286)
T 2r91_A 154 DTNESLAHTLAYKR-YLPQARVYNGSDSLVFAS-FAVRLDGVVASSANYLPELLAGIRDAVAAGDIERARSLQFLLDEIV 231 (286)
T ss_dssp ECCSCHHHHHHHHH-HCTTSEEEECCGGGHHHH-HHTTCSEECCGGGTTCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred eCCCCHHHHHHHHh-cCCCEEEEEccHHHHHHH-HHcCCCEEEecHHHhCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 999983 3 444 577999999999998875 8999999999999999999999986 465 678999999999
Q ss_pred HHHhcCCCh-HHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHc
Q 018443 284 EWLFQEPNP-IPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQI 331 (356)
Q Consensus 284 ~~~~~~~~~-~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~ 331 (356)
+.++..+++ +.+|++|+++|++.+.+|+|+.+++++++++|+++++++
T Consensus 232 ~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~ 280 (286)
T 2r91_A 232 ESARHIGYAAAVYELVEIFQGYEAGEPRGPVYPLDPEEKAWLRAAVAKA 280 (286)
T ss_dssp HHHHHHCHHHHHHHHHHHHHCSCCCBCCTTSCCCCHHHHHHHHHHTHHH
T ss_pred HHHhccCChHHHHHHHHHHcCCCCCCcCCCCCCCCHHHHHHHHHHHHHH
Confidence 987766678 899999999999889999999999999999999999876
No 33
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.1e-64 Score=493.44 Aligned_cols=271 Identities=21% Similarity=0.265 Sum_probs=251.4
Q ss_pred ccCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCC
Q 018443 55 KALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN 134 (356)
Q Consensus 55 ~~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~ 134 (356)
.++|++++++|||++||+||+++++++++|+++.|++||+++|||||+++||.+||+++++. ++++|+|||+|+|++
T Consensus 26 ~~~Gv~~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~---~~~grvpViaGvg~~ 102 (344)
T 2hmc_A 26 IFSGVIPALMTPCRQDRTPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER---LVKAGIPVIVGTGAV 102 (344)
T ss_dssp TTSEEEEBCCCCBCTTSSBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH---HHHTTCCEEEECCCS
T ss_pred ccCceEEeeeCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH---HhCCCCcEEEecCCC
Confidence 37899999999999999999999999999999999999999999999999999999999998 567899999999999
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCC-CCHHHHHHHHHHHHh-c--CCeEEEeCCCCCCCCCCHHHHHHH-hcCCCE
Q 018443 135 STREAIHATEQGFAVGMHAALHINPYYGK-TSLEGLISHFDSVLS-M--GPTIIYNVPSRTGQDIPPRVIHTM-AQSPNL 209 (356)
Q Consensus 135 st~~ai~lar~a~~~Gadavlv~pP~y~~-~s~~~l~~y~~~va~-~--~PiilYn~P~~tG~~ls~~~l~~L-a~~pni 209 (356)
+|+++|+++++|+++|||+++++||||++ ++++++++||++|++ + +|||+||+| +||++++++++.+| +++|||
T Consensus 103 st~eai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~~lPiilYn~P-~tg~~l~~e~~~~L~a~~pnI 181 (344)
T 2hmc_A 103 NTASAVAHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAPEIPAVIYNSP-YYGFATRADLFFALRAEHKNL 181 (344)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHSTTSCEEEEEBG-GGTBCCCHHHHHHHHHHCTTE
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCCCCcEEEEecC-ccCCCcCHHHHHHHHhcCCCE
Confidence 99999999999999999999999999999 999999999999999 6 799999999 99999999999999 899999
Q ss_pred EEEeecCc--hh-hHhh---hhCCCeEEEecCcchhHhHHH-HcCCceeecccccccHHHHHHHHHc------CC--cHH
Q 018443 210 AGVKECVG--ND-RVEH---YTGNGIVVWSGNDDQCHDARW-NHGATGVISVTSNLVPGMMRELMFG------GK--NPS 274 (356)
Q Consensus 210 vGiK~s~~--d~-~i~~---~~~~~~~v~~G~d~~~l~~~l-~~Ga~G~is~~~n~~P~~~~~l~~a------g~--a~~ 274 (356)
+|||++++ |. ++.+ ..+++|.||+|.|+++++. + ..|++|+||+++|++|+.+++||++ || +++
T Consensus 182 vGiKdssgp~d~~~~~~~~~~~~~~f~v~~G~D~~~l~~-l~~~Ga~G~is~~anv~P~~~~~l~~a~~~~~~Gd~~A~~ 260 (344)
T 2hmc_A 182 VGFKEFGGPADMRYAAENITSRDDEVTLMIGVDTAVVHG-FVNCGATGAITGIGNVLPKEVIHLCKLSQAAAKGDADARA 260 (344)
T ss_dssp EEEEECSCHHHHHHHHHHTSCSSSSCEEEECSGGGHHHH-HHHSCCCEEEESGGGTSHHHHHHHHHHHHHHTTTCHHHHH
T ss_pred EEEEcCCCCCCHHHHHHHHHHcCCCEEEEECcHHHHHHH-HHHcCCCEEEeCHHHhhHHHHHHHHHhHHHHhcCcHHHHH
Confidence 99999999 83 4433 3457899999999998875 8 8999999999999999999999865 44 467
Q ss_pred HHHHHH----HHHHHHhcCCChHHHHHHHHHcCCCCCCCCCCC---CCCCHHHHHHHHHHHHHcC
Q 018443 275 LNTKLF----PLIEWLFQEPNPIPLNTALAQLGVVRPVFRLPY---VPLPQEKRAEFVNLVNQIG 332 (356)
Q Consensus 275 l~~~l~----~l~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl---~~l~~~~~~~l~~~l~~~g 332 (356)
+|+++. ++++.++..+++..+|++|+++|+ +.+|+|+ .+++++++++|++++++++
T Consensus 261 l~~~l~~~~~~l~~~~~~~~~~~~~K~al~~~G~--g~~R~Pl~~~~~l~~~~~~~l~~~l~~~~ 323 (344)
T 2hmc_A 261 RALELEQALAVLSSFDEGPDLVLYFKYMMVLKGD--KEYTLHFNETDALTDSQRGYVEAQFKLFN 323 (344)
T ss_dssp HHHHHHHHTHHHHHGGGSTTHHHHHHHHHHHTTC--GGGSCCSSTTCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhHHHHHHhcCCcHHHHHHHHHHCCC--CCCCCCCCCCCCcCHHHHHHHHHHHHHHh
Confidence 899999 999877777778899999999999 8899999 9999999999999998865
No 34
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=100.00 E-value=3.2e-64 Score=485.62 Aligned_cols=276 Identities=22% Similarity=0.268 Sum_probs=253.1
Q ss_pred ccCceeEeeecccCC-CCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Q 018443 55 KALRLITAIKTPYLP-DGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGS 133 (356)
Q Consensus 55 ~~~Gvi~al~TPf~~-dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~ 133 (356)
+++|++++++|||++ ||+||+++++++++|+++.|++||+++|||||+++||.+||+++++.+++.+++|+|||+|+|+
T Consensus 11 ~~~Gv~~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~ 90 (316)
T 3e96_A 11 ALETISGIPITPFRKSDGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGY 90 (316)
T ss_dssp HTSSEEECCCCCBCTTTCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS
T ss_pred cCCceEEeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCc
Confidence 489999999999999 9999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCEEE
Q 018443 134 NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAG 211 (356)
Q Consensus 134 ~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~~pnivG 211 (356)
+|+++++++++|+++|||++++++|||+++|++++++||++|+++ +||++||+ |.+++++++.+|+++|||+|
T Consensus 91 -~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~----g~~l~~~~~~~La~~pnIvg 165 (316)
T 3e96_A 91 -ATSTAIELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEALDFPSLVYFK----DPEISDRVLVDLAPLQNLVG 165 (316)
T ss_dssp -SHHHHHHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHHTSCEEEEEC----CTTSCTHHHHHHTTCTTEEE
T ss_pred -CHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeC----CCCCCHHHHHHHHcCCCEEE
Confidence 999999999999999999999999999999999999999999997 79999996 78999999999999999999
Q ss_pred EeecCchh-hHh---hhhCC-CeE-EEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHH
Q 018443 212 VKECVGND-RVE---HYTGN-GIV-VWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKL 279 (356)
Q Consensus 212 iK~s~~d~-~i~---~~~~~-~~~-v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~~~l 279 (356)
||++++|. ++. +..++ +|. ||+|.|+.++...+..|++|+||+++|++|+.++++|+ +|| ++++|+++
T Consensus 166 iKdssgd~~~~~~~~~~~~~~~f~~v~~G~d~~~~~~~l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l 245 (316)
T 3e96_A 166 VKYAINDLPRFAKVVRSIPEEHQIAWICGTAEKWAPFFWHAGAKGFTSGLVNLLPQKAVEMLEALRNNDNDAVWRIWEDI 245 (316)
T ss_dssp EEECCCCHHHHHHHHTTSCGGGCCEEEETTCTTTHHHHHHHTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred EEeCCCCHHHHHHHHHhcCCCCceEEEeCChHHHHHHHHHCCCCEEEechhhhhHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 99999984 333 33344 798 99999887665557899999999999999999999987 465 67899999
Q ss_pred HHHHHHHh---cCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCccc
Q 018443 280 FPLIEWLF---QEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGREN 335 (356)
Q Consensus 280 ~~l~~~~~---~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~gl~~ 335 (356)
.++.+... ..+++..+|++|+++|++.+.+|+|+.+++++++++|+++++++|+..
T Consensus 246 ~~l~~~~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~l~~ 304 (316)
T 3e96_A 246 VPFEDLRGKYNQGNNVVVIKEAMEMLRQNAGVTRAPVNELSNEDKQLVTELLSSWKLLQ 304 (316)
T ss_dssp HHHHHHHTTTTTTTTTHHHHHHHHHTTCCCBBCCTTCCCCCHHHHHHHHHHHHHTTC--
T ss_pred hHHHHHHHHhccCccHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCCC
Confidence 99876542 356889999999999999899999999999999999999999998754
No 35
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=100.00 E-value=4.1e-64 Score=484.31 Aligned_cols=276 Identities=19% Similarity=0.254 Sum_probs=250.5
Q ss_pred ccCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCC
Q 018443 55 KALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN 134 (356)
Q Consensus 55 ~~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~ 134 (356)
+++|++++++|||++||+||+++++++++|+++.|++||+++|||||+++||.+||+++++.+++.+ +|+|||+|+|++
T Consensus 8 ~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~ 86 (313)
T 3dz1_A 8 EAAGTFAIAPTPFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGVSAP 86 (313)
T ss_dssp TCCEEEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEECCCS
T ss_pred CCCeEEEEeeCCCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEecCCC
Confidence 4799999999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc----CCeEEEeCCCCCCCCCCHHHHHHHh-cCCCE
Q 018443 135 STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM----GPTIIYNVPSRTGQDIPPRVIHTMA-QSPNL 209 (356)
Q Consensus 135 st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~----~PiilYn~P~~tG~~ls~~~l~~La-~~pni 209 (356)
+|+++++++++|+++|||+++++|||| +++++++++||++|+++ +||++||+|++||++++++++.+|+ ++|||
T Consensus 87 ~t~~ai~la~~A~~~Gadavlv~~P~~-~~s~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnI 165 (313)
T 3dz1_A 87 GFAAMRRLARLSMDAGAAGVMIAPPPS-LRTDEQITTYFRQATEAIGDDVPWVLQDYPLTLSVVMTPKVIRQIVMDSASC 165 (313)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECCCTT-CCSHHHHHHHHHHHHHHHCTTSCEEEEECHHHHCCCCCHHHHHHHHHHCSSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCC-CCCHHHHHHHHHHHHHhCCCCCcEEEEeCccccCcCCCHHHHHHHHHhCCCE
Confidence 999999999999999999999999985 58999999999999985 6999999999999999999999999 59999
Q ss_pred EEEee-cCchh-h---HhhhhC----CCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHH
Q 018443 210 AGVKE-CVGND-R---VEHYTG----NGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPS 274 (356)
Q Consensus 210 vGiK~-s~~d~-~---i~~~~~----~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~ 274 (356)
+|||+ +++|. + +.+..+ ++|.||+|+|+++++..+..|++|+|++ |++|+.++++|+ +|| |++
T Consensus 166 vgiKd~~~~~~~~~~~~~~~~~~~~~~~f~v~~G~d~~~l~~~l~~G~~G~i~~--~~~P~~~~~l~~a~~~Gd~~~A~~ 243 (313)
T 3dz1_A 166 VMLKHEDWPGLEKITTLRGFQKDGSLRPLSILCGNGGLFLDFEMERGADGAMTG--YCFPDMLVDVVKLSKAGQRDLAHN 243 (313)
T ss_dssp EEEEECCSSCHHHHHHHHHHHHHTSSCCCEEEECGGGTTHHHHHHHTCCEEEEC--CSCHHHHHHHHHHHHTTCHHHHHH
T ss_pred EEEEcCCCCCHHHHHHHHHhcCccCCCCeEEEeCCcHHHHHHHHHCCCcEEEeC--cccHHHHHHHHHHHHCCCHHHHHH
Confidence 99999 46773 3 333343 7899999999887764489999999975 789999999987 465 678
Q ss_pred HHHHHHHHHHHHhcCC-ChHHHHHHHHHcCCC-CCCCCCCCCCCCHHHHHHHHHHHHHcCcc
Q 018443 275 LNTKLFPLIEWLFQEP-NPIPLNTALAQLGVV-RPVFRLPYVPLPQEKRAEFVNLVNQIGRE 334 (356)
Q Consensus 275 l~~~l~~l~~~~~~~~-~~~~~K~al~~~G~~-~g~~R~Pl~~l~~~~~~~l~~~l~~~gl~ 334 (356)
+|+++.++++.++..+ ++..+|++|+++|++ .+.+|+|+.+++++++++|+++++++++.
T Consensus 244 l~~~l~~l~~~~~~~~~~~~~~K~al~~~G~~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~~ 305 (313)
T 3dz1_A 244 LFDAHLPLIRYEHQQGVGLSVRKYVLKKRGLLSSSAQRKPGASLTDTAREEVDYLLSRLARV 305 (313)
T ss_dssp HHHHHHHHHHHHCSTTHHHHHHHHHHHHTTSCSCCCCCSSCCCCCHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHhccCCCHHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccc
Confidence 9999999999876654 688999999999984 78999999999999999999999998763
No 36
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=100.00 E-value=5.1e-64 Score=478.46 Aligned_cols=266 Identities=20% Similarity=0.294 Sum_probs=250.3
Q ss_pred CceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCH
Q 018443 57 LRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNST 136 (356)
Q Consensus 57 ~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st 136 (356)
+|++++++|||++||+||+++++++++|+++.|++|++++|||||+++||.+||+++++.+++.+++ ||+|+|+++|
T Consensus 1 ~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g---ViaGvg~~~t 77 (288)
T 2nuw_A 1 MEIISPIITPFDKQGKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK---LIFQVGSLNL 77 (288)
T ss_dssp CEEEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC---EEEECCCSCH
T ss_pred CCeEEeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---eEEeeCCCCH
Confidence 5899999999999999999999999999999999999999999999999999999999999998877 9999999999
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCC-CCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCEEEEe
Q 018443 137 REAIHATEQGFAVGMHAALHINPYYGK-TSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 213 (356)
Q Consensus 137 ~~ai~lar~a~~~Gadavlv~pP~y~~-~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~~pnivGiK 213 (356)
+++++++++|+++|||++|++||||++ +|++++++||++|+++ +||++||+|++||++++++++.+| ||+|||
T Consensus 78 ~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L----nIvgiK 153 (288)
T 2nuw_A 78 NDVMELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARISSHSLYIYNYPAATGYDIPPSILKSL----PVKGIK 153 (288)
T ss_dssp HHHHHHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHTTT----TEEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEECchHhCcCCCHHHHhcc----EEEEEE
Confidence 999999999999999999999999999 9999999999999997 799999999999999999999999 999999
Q ss_pred ecCchh----hHhhhhCCCeEEEecCcchhHhHHHHcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHHH
Q 018443 214 ECVGND----RVEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPLI 283 (356)
Q Consensus 214 ~s~~d~----~i~~~~~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~---ag~---a~~l~~~l~~l~ 283 (356)
++++|. ++.+ .+++|.||+|+|+++++. +.. ++|+||+++|++|+.++++|+ +|| ++++|+++.+++
T Consensus 154 dssgd~~~~~~~~~-~~~~f~v~~G~d~~~~~~-l~~-~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~ 230 (288)
T 2nuw_A 154 DTNQDLAHSLEYKL-NLPGVKVYNGSNTLIYYS-LLS-LDGVVASFTNFIPEVIVKQRDLIKQGKLDDALRLQELINRLA 230 (288)
T ss_dssp ECCSCHHHHHHHHH-HSTTCEEEECCGGGHHHH-HTT-SSEEECGGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred eCCCCHHHHHHHHh-cCCCeEEEECcHHHHHHH-HHH-hCEEEecHHHhCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 999983 3444 578999999999998876 788 999999999999999999986 565 678999999999
Q ss_pred HHHhcCCC-hHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcC
Q 018443 284 EWLFQEPN-PIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIG 332 (356)
Q Consensus 284 ~~~~~~~~-~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~g 332 (356)
+.++..++ +..+|++|+++|++.+.+|+|+.++++++++++++++++++
T Consensus 231 ~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~ 280 (288)
T 2nuw_A 231 DILRKYGSISAIYVLVNEFQGYDVGYPRPPIFPLTDEEALSLKREIEPLK 280 (288)
T ss_dssp HHHHTTCHHHHHHHHHHHHHSSCCCBCCTTSCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCChHHHHHHHHHHcCCCCCCcCCCCCCCCHHHHHHHHHHHHHHH
Confidence 98887766 88999999999998899999999999999999999999875
No 37
>4dnh_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati YORK structural genomics research consortium; 2.50A {Sinorhizobium meliloti}
Probab=98.02 E-value=0.00047 Score=65.09 Aligned_cols=218 Identities=19% Similarity=0.222 Sum_probs=151.6
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCC--CcEEEEecCCC--------CHHHHH
Q 018443 71 GRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA--SVKVIGNTGSN--------STREAI 140 (356)
Q Consensus 71 g~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~g--rvpVi~gvg~~--------st~~ai 140 (356)
..|||++.-+.=++|-+.|..--=..-|.--+.-|++..-++||+....+++. ...|..|+|.. +.++.+
T Consensus 57 aaiDWdaTLafR~~Lws~GLGVAEAMDTAQRGMGLDW~~a~ELIrRs~aeA~~~pg~~ia~G~GTDqL~~~~~~~l~~V~ 136 (396)
T 4dnh_A 57 PAIDWERTLAFRHRLWDLGLGVAESMDTAQRGMGLGWPEARELIRRSLAEARGRPDALIACGAGTDHLAPGPDVSIDDIL 136 (396)
T ss_dssp CCBCHHHHHHHHHHHHHTTCEEEETCGGGTBTTTBCHHHHHHHHHHHHHHHHTSSSCCEEEEECCTTSCCCTTCCHHHHH
T ss_pred ccCChHHHHHHHHHHHHccccHHHHHHHhhccCCCCcHHHHHHHHHHHHHHhcCCCCeeeeccCcCCCCCCCCCCHHHHH
Confidence 58999999999999999996555556788889999999999999998876532 24577777632 444443
Q ss_pred ----HHHHHHHHcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHhc--CCeEEEeC-----CCCCCC----CCC--HHHHH
Q 018443 141 ----HATEQGFAVGMHAALHINPYY--GKTSLEGLISHFDSVLSM--GPTIIYNV-----PSRTGQ----DIP--PRVIH 201 (356)
Q Consensus 141 ----~lar~a~~~Gadavlv~pP~y--~~~s~~~l~~y~~~va~~--~PiilYn~-----P~~tG~----~ls--~~~l~ 201 (356)
|+....++.|+..|+...-.. ...++++..+-|..|.+. .|||+.=. |...|+ ++. .+++.
T Consensus 137 ~AY~EQ~~~Ve~~G~~~ILMASRaLA~~A~~pdDY~~VY~~vL~q~~~PVILHWLG~mFDPaL~GYWGs~d~~~A~~t~l 216 (396)
T 4dnh_A 137 AAYESQIEAIEAEGGRIILMASRALAAAAKGPEDYIRVYDRVLSQVKEPVIIHWLGEMFDPALEGYWGNADHMAAMKTCL 216 (396)
T ss_dssp HHHHHHHHHHHHTTCCEEECCCHHHHHHCCSHHHHHHHHHHHHHHCSSCEEEEEECTTTCGGGTTTTSCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEehhHHHHHHhCCHHHHHHHHHHHHHhcCCCEEEEecccccChhhccccCCCCHHHHHHHHH
Confidence 556677889998887654322 235788888888998876 59998743 554554 222 35666
Q ss_pred HHh-cC-CCEEEEeecCchh----hHhhhhCCCeEEEecCcchhHhHHHHcC-----CceeecccccccHHHHHHHH--H
Q 018443 202 TMA-QS-PNLAGVKECVGND----RVEHYTGNGIVVWSGNDDQCHDARWNHG-----ATGVISVTSNLVPGMMRELM--F 268 (356)
Q Consensus 202 ~La-~~-pnivGiK~s~~d~----~i~~~~~~~~~v~~G~d~~~l~~~l~~G-----a~G~is~~~n~~P~~~~~l~--~ 268 (356)
.|. ++ ..|-|||.|--|. .+++..+.+++.|+|+|-.+ +. |..| .+..++....+.|.....+- +
T Consensus 217 ~lI~~~~~kVDGIKiSLLDa~~Ei~lRrrLP~gVrmYTGDDFnY-pE-LI~GD~~g~ShALLGIFdaIaPaAs~Al~aLd 294 (396)
T 4dnh_A 217 DVLEAHAAKVDGIKISLLSKEKEIVMRRQLPKGVRMYTGDDFNY-AE-LIAGDEEGHSDALLGIFDAIAPVASAALEALG 294 (396)
T ss_dssp HHHHHTGGGEEEEEEESCCHHHHHHHHTSCCTTCEEEECCTTTH-HH-HHHCCSSCCCEEEESHHHHTHHHHHHHHHHHH
T ss_pred HHHHhChhhcCceEEeeeccHhHHHHHHhCCCcceeecCCCCCc-HH-HhcCCCCCccHHHHhhhhhccHHHHHHHHHHh
Confidence 665 56 5799999999883 35566788999999987544 44 5555 34444444555676666654 5
Q ss_pred cCCcHH---HHHHHHHHHHHHhcCC
Q 018443 269 GGKNPS---LNTKLFPLIEWLFQEP 290 (356)
Q Consensus 269 ag~a~~---l~~~l~~l~~~~~~~~ 290 (356)
+|+... +.+--.||-.-+|..|
T Consensus 295 ~Gd~~~f~~iL~PTvpLsRhiF~aP 319 (396)
T 4dnh_A 295 SGRNGEFFELLEPTVPLSRHIFKAP 319 (396)
T ss_dssp TTCHHHHHHHHTTHHHHHHHHTCSS
T ss_pred CCCHHHHHHHhcCcchhhhhhhcCC
Confidence 787544 4444456777777655
No 38
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=97.67 E-value=0.0021 Score=60.91 Aligned_cols=131 Identities=15% Similarity=0.159 Sum_probs=89.8
Q ss_pred eeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEcc--------CcccccCCCHHHHHHHHHHHHHHhCCCcEEEEe
Q 018443 59 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGG--------TTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGN 130 (356)
Q Consensus 59 vi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~G--------stGE~~~Lt~eEr~~li~~~~~~~~grvpVi~g 130 (356)
|++-+.|-| | +.+...+.++.+++.|+.|+-+=+ +.+.-...+.+|..+-++.+++. +....|++-
T Consensus 92 viaD~d~Gy---g--~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A-~~~~~I~AR 165 (305)
T 3ih1_A 92 VLVDIDTGF---G--GVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV-APSLYIVAR 165 (305)
T ss_dssp EEEECTTCS---S--SHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH-CTTSEEEEE
T ss_pred EEEECCCCC---C--CHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc-CCCeEEEEe
Confidence 444444444 2 356678899999999999998754 44566788999999999999988 556667776
Q ss_pred cCC---CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCCCC--CCCCHHHHHHH
Q 018443 131 TGS---NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPSRTG--QDIPPRVIHTM 203 (356)
Q Consensus 131 vg~---~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~~PiilYn~P~~tG--~~ls~~~l~~L 203 (356)
+-+ ...+++|++++.++++|||++++-.+ ++.+++.++-+++ ..|++ -|.-. .| -.++.+.+.+|
T Consensus 166 tda~~~~g~~~ai~Ra~ay~eAGAD~i~~e~~----~~~~~~~~i~~~~--~~P~~-~n~~~-~g~tp~~~~~eL~~l 235 (305)
T 3ih1_A 166 TDARGVEGLDEAIERANAYVKAGADAIFPEAL----QSEEEFRLFNSKV--NAPLL-ANMTE-FGKTPYYSAEEFANM 235 (305)
T ss_dssp ECCHHHHCHHHHHHHHHHHHHHTCSEEEETTC----CSHHHHHHHHHHS--CSCBE-EECCT-TSSSCCCCHHHHHHT
T ss_pred eccccccCHHHHHHHHHHHHHcCCCEEEEcCC----CCHHHHHHHHHHc--CCCEE-EeecC-CCCCCCCCHHHHHHc
Confidence 644 24889999999999999999998654 3555554443333 15884 34311 11 13555555544
No 39
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=97.60 E-value=0.0036 Score=59.07 Aligned_cols=105 Identities=12% Similarity=0.102 Sum_probs=81.5
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcc--------cccCCCHHHHHHHHHHHHHHhC-CCcEEEEecCCC---CHHHHHH
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTG--------EGQLMSWDEHIMLIGHTVNCFG-ASVKVIGNTGSN---STREAIH 141 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstG--------E~~~Lt~eEr~~li~~~~~~~~-grvpVi~gvg~~---st~~ai~ 141 (356)
+.....+.++.+++.|+.|+-+=+.++ .-...+.+|..+-++.+++... ...-|++=+-+. ..+++|+
T Consensus 96 ~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldeai~ 175 (298)
T 3eoo_A 96 GAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAAIE 175 (298)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHHHH
Confidence 677888999999999999998866553 4456789999998988888754 345566655432 5788999
Q ss_pred HHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEE
Q 018443 142 ATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTII 184 (356)
Q Consensus 142 lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~~Piil 184 (356)
+++.+.++|||++++-.+ .+.+++.++-+++. .|+++
T Consensus 176 Ra~ay~~AGAD~if~~~~----~~~ee~~~~~~~~~--~Pl~~ 212 (298)
T 3eoo_A 176 RAIAYVEAGADMIFPEAM----KTLDDYRRFKEAVK--VPILA 212 (298)
T ss_dssp HHHHHHHTTCSEEEECCC----CSHHHHHHHHHHHC--SCBEE
T ss_pred HHHhhHhcCCCEEEeCCC----CCHHHHHHHHHHcC--CCeEE
Confidence 999999999999998654 47888877777663 78754
No 40
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=97.54 E-value=7e-05 Score=69.43 Aligned_cols=180 Identities=16% Similarity=0.173 Sum_probs=107.6
Q ss_pred eeEeeecccCC---CCCC-CHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCC
Q 018443 59 LITAIKTPYLP---DGRF-DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN 134 (356)
Q Consensus 59 vi~al~TPf~~---dg~I-D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~ 134 (356)
....+.++++. .+.+ +.+...++++.+.+.|++++++.. .+++.+.+...+++|+++++.+.
T Consensus 24 ~~~~~~~~id~~~~l~p~~~~~~~~~~~~~~~~~g~~~i~~~~--------------~~~~~~~~~~~~~~~~~v~~~~~ 89 (273)
T 2qjg_A 24 SEKTVIVPMDHGVSNGPIKGLIDIRKTVNDVAEGGANAVLLHK--------------GIVRHGHRGYGKDVGLIIHLSGG 89 (273)
T ss_dssp TCCEEEEECCHHHHHCSCTTSSSHHHHHHHHHHHTCSEEEECH--------------HHHHSCCCSSSCCCEEEEECEEC
T ss_pred CCCEEEEEcccccccCCCcchhhHHHHHHHHHhcCCCEEEeCH--------------HHHHHHHHhhcCCCCEEEEEcCC
Confidence 44556666654 3333 556667899999999999998632 12222223345688999888654
Q ss_pred C-------HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-----CCeEEEeCCCCCCCC----CCHH
Q 018443 135 S-------TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-----GPTIIYNVPSRTGQD----IPPR 198 (356)
Q Consensus 135 s-------t~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-----~PiilYn~P~~tG~~----ls~~ 198 (356)
+ ++...+.++.|.+.|+|.|.+. .++...+.+++++..+++.+. .|+++...+ .|.+ ++++
T Consensus 90 ~~~~~d~~~~~~~~~v~~a~~~Ga~~v~~~-l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~--~G~~l~~~~~~~ 166 (273)
T 2qjg_A 90 TAISPNPLKKVIVTTVEEAIRMGADAVSIH-VNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYP--RGKHIQNERDPE 166 (273)
T ss_dssp CTTSSSTTCCEECSCHHHHHHTTCSEEEEE-EEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEE--CSTTCSCTTCHH
T ss_pred CcCCCCcccchHHHHHHHHHHcCCCEEEEE-EecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCC--CCcccCCCCCHh
Confidence 3 1233677888999999999432 123345778777777777653 688887644 2444 5666
Q ss_pred HHHHH---h-cC-CCEEEEeecCchhhHh---hhhCCCeEEEecCcc-h------hHhHHHHcCCceeeccc
Q 018443 199 VIHTM---A-QS-PNLAGVKECVGNDRVE---HYTGNGIVVWSGNDD-Q------CHDARWNHGATGVISVT 255 (356)
Q Consensus 199 ~l~~L---a-~~-pnivGiK~s~~d~~i~---~~~~~~~~v~~G~d~-~------~l~~~l~~Ga~G~is~~ 255 (356)
.+.++ + +. ..++++..+.+-..+. +..+-.+....|-.. . .+...+..|++|+..+.
T Consensus 167 ~~~~~a~~a~~~Gad~i~~~~~~~~~~l~~i~~~~~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~ 238 (273)
T 2qjg_A 167 LVAHAARLGAELGADIVKTSYTGDIDSFRDVVKGCPAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVGR 238 (273)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCSSHHHHHHHHHHCSSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECCH
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEeeH
Confidence 66554 3 22 4677776532222333 223334555555542 1 02334578999998764
No 41
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=97.51 E-value=0.0057 Score=57.95 Aligned_cols=124 Identities=17% Similarity=0.096 Sum_probs=87.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcc--------cccCCCHHHHHHHHHHHHHHh---CCCcEEEEecCC---CCHHHH
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTG--------EGQLMSWDEHIMLIGHTVNCF---GASVKVIGNTGS---NSTREA 139 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstG--------E~~~Lt~eEr~~li~~~~~~~---~grvpVi~gvg~---~st~~a 139 (356)
+.....+.++.+++.|+.|+-+=+.++ .-...+.+|..+-++.+++.. +...-|++=+-+ ...+++
T Consensus 101 ~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeA 180 (307)
T 3lye_A 101 GPIMVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSLGYEEC 180 (307)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHCHHHH
T ss_pred CHHHHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhccCHHHH
Confidence 466788899999999999999877664 335678888777777776654 345556665543 357899
Q ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeC-CCCCCCCCCHHHHHHH
Q 018443 140 IHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNV-PSRTGQDIPPRVIHTM 203 (356)
Q Consensus 140 i~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~~PiilYn~-P~~tG~~ls~~~l~~L 203 (356)
|++++.+.++|||++++..+ .+.+++.++.+++. ..|++ .|. +......++.+.+++|
T Consensus 181 i~Ra~ay~eAGAD~ifi~~~----~~~~~~~~i~~~~~-~~Pv~-~n~~~~g~~p~~t~~eL~~l 239 (307)
T 3lye_A 181 IERLRAARDEGADVGLLEGF----RSKEQAAAAVAALA-PWPLL-LNSVENGHSPLITVEEAKAM 239 (307)
T ss_dssp HHHHHHHHHTTCSEEEECCC----SCHHHHHHHHHHHT-TSCBE-EEEETTSSSCCCCHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEecCC----CCHHHHHHHHHHcc-CCcee-EEeecCCCCCCCCHHHHHHc
Confidence 99999999999999998543 57788877776664 35774 453 3211224677666666
No 42
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=97.49 E-value=0.0058 Score=57.76 Aligned_cols=124 Identities=15% Similarity=0.115 Sum_probs=88.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcc--------cccCCCHHHHHHHHHHHHHHh---CCCcEEEEecCC---CCHHHH
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTG--------EGQLMSWDEHIMLIGHTVNCF---GASVKVIGNTGS---NSTREA 139 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstG--------E~~~Lt~eEr~~li~~~~~~~---~grvpVi~gvg~---~st~~a 139 (356)
+.....+.++.+++.|+.|+-+=+.++ .-...+.+|..+=++.+++.. +.+.-|++=+-+ ...+++
T Consensus 93 ~~~~v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeA 172 (302)
T 3fa4_A 93 GPIMVARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGYEES 172 (302)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHCHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCCHHHH
Confidence 566788999999999999999977764 235678888888888887754 445666665543 368999
Q ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeC-CCCCCCCCCHHHHHHH
Q 018443 140 IHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNV-PSRTGQDIPPRVIHTM 203 (356)
Q Consensus 140 i~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~~PiilYn~-P~~tG~~ls~~~l~~L 203 (356)
|++++.+.++|||++++..+ .+.+++.++.+++. ..|+++ |. +......++.+.+++|
T Consensus 173 i~Ra~ay~eAGAD~ifi~g~----~~~~ei~~~~~~~~-~~Pl~~-n~~~~g~~p~~~~~eL~~l 231 (302)
T 3fa4_A 173 VARLRAARDAGADVGFLEGI----TSREMARQVIQDLA-GWPLLL-NMVEHGATPSISAAEAKEM 231 (302)
T ss_dssp HHHHHHHHTTTCSEEEETTC----CCHHHHHHHHHHTT-TSCEEE-ECCTTSSSCCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEeecCC----CCHHHHHHHHHHhc-CCceeE-EEecCCCCCCCCHHHHHHc
Confidence 99999999999999998653 47777766655553 258754 43 3211124677777776
No 43
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=97.36 E-value=0.0076 Score=59.44 Aligned_cols=125 Identities=18% Similarity=0.151 Sum_probs=91.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEEE---------ccCcccccCCCHHHHHHHHHHHHHHh---CCCcEEEEecCC--------
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIV---------GGTTGEGQLMSWDEHIMLIGHTVNCF---GASVKVIGNTGS-------- 133 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v---------~GstGE~~~Lt~eEr~~li~~~~~~~---~grvpVi~gvg~-------- 133 (356)
+.....++++.++++|+.|+.+ ||..|--...+.+|..+=+++++... +...-|++=+-+
T Consensus 161 ~~~nv~~tvk~~i~AGaaGi~IEDq~~~~KkCGH~~gk~lvp~~e~v~rI~AAr~A~~~~g~d~vIiARTDa~~a~li~s 240 (429)
T 1f8m_A 161 GALNVYELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADVPTVVIARTDAEAATLITS 240 (429)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECBCGGGCCCTTSSCCEECCHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTTCCEESC
T ss_pred CcHHHHHHHHHHHHcCCEEEEEecCCCccccccCCCCCeeeCHHHHHHHHHHHHHHHHhcCCCEEEEEEechhhhccccc
Confidence 4557899999999999999987 34445556788999988888887765 334555665543
Q ss_pred -----------------------CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCC--eEEEeC-
Q 018443 134 -----------------------NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGP--TIIYNV- 187 (356)
Q Consensus 134 -----------------------~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~~P--iilYn~- 187 (356)
...+++|++++.+.+ |||.+.+-++ .++.+++.++-++|....| ++.||.
T Consensus 241 ~~d~~d~~fl~g~~~~eg~y~~~~gld~AI~Ra~AYa~-gAD~if~e~~---~~~~eei~~f~~~v~~~~P~~~La~n~s 316 (429)
T 1f8m_A 241 DVDERDQPFITGERTREGFYRTKNGIEPCIARAKAYAP-FADLIWMETG---TPDLEAARQFSEAVKAEYPDQMLAYNCS 316 (429)
T ss_dssp CCSTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHGG-GCSEEEECCS---SCCHHHHHHHHHHHHTTCTTCEEEEECC
T ss_pred cccccccccccCCCCcccccccccCHHHHHHHHHHHHh-cCCEEEeCCC---CCCHHHHHHHHHHhcccCCCceeecCCC
Confidence 468999999999988 9999998542 2588999999999876556 678986
Q ss_pred CCCC-CCCCCHHHHHH
Q 018443 188 PSRT-GQDIPPRVIHT 202 (356)
Q Consensus 188 P~~t-G~~ls~~~l~~ 202 (356)
|..+ ...++++.++.
T Consensus 317 Psf~w~~~~~~~~~~~ 332 (429)
T 1f8m_A 317 PSFNWKKHLDDATIAK 332 (429)
T ss_dssp TTSCHHHHCCHHHHHH
T ss_pred CCCCcccccchhhHhH
Confidence 5433 11356555544
No 44
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=97.32 E-value=0.0073 Score=59.49 Aligned_cols=123 Identities=20% Similarity=0.174 Sum_probs=91.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEc---------cCcccccCCCHHHHHHHHHHHHHHh---CCCcEEEEecCC--------
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVG---------GTTGEGQLMSWDEHIMLIGHTVNCF---GASVKVIGNTGS-------- 133 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~---------GstGE~~~Lt~eEr~~li~~~~~~~---~grvpVi~gvg~-------- 133 (356)
+.....+.++.+++.|+.|+.+= |..+.-...+.+|..+-++++++.. +...-|++=+-+
T Consensus 165 ~~~~v~~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~~~~d~~IiARTDa~aa~l~~s 244 (435)
T 3lg3_A 165 GVLNAFELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLAADVLGVPTLLIARTDADAADLLTS 244 (435)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESC
T ss_pred CcHHHHHHHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCCcccccccc
Confidence 44467899999999999999884 4444556778898888777776654 445556665543
Q ss_pred -----------------------CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeC-
Q 018443 134 -----------------------NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNV- 187 (356)
Q Consensus 134 -----------------------~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~- 187 (356)
...+++|++++.+.+ |||.+.+-++ .++.+++.++-++|... ..++.||.
T Consensus 245 ~~d~rD~~fi~G~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~if~E~~---~~~~~ei~~f~~~v~~~~P~~~La~~~s 320 (435)
T 3lg3_A 245 DCDPYDREFITGDRTAEGFFRTRAGIEQAISRGLAYAP-YADLVWCETS---TPDLALAKRFADAVHAQFPGKLLAYNCS 320 (435)
T ss_dssp CCCGGGGGGEEEEECTTCCEEECCSHHHHHHHHHHHGG-GCSEEEECCS---SCCHHHHHHHHHHHHHHSTTCEEEEECC
T ss_pred ccccccchhhcccccccccccccCCHHHHHHHHHHHHc-cCCEEEecCC---CCCHHHHHHHHHHhccccCCeEEEeCCC
Confidence 579999999999998 9999998654 45889999999999765 45788986
Q ss_pred CCCC-CCCCCHHHH
Q 018443 188 PSRT-GQDIPPRVI 200 (356)
Q Consensus 188 P~~t-G~~ls~~~l 200 (356)
|..+ ...++++.+
T Consensus 321 Psfnw~~~~~d~~~ 334 (435)
T 3lg3_A 321 PSFNWKKNLTDQQI 334 (435)
T ss_dssp SSSCHHHHSCHHHH
T ss_pred CCccccccCCHHHH
Confidence 5442 123666554
No 45
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=97.26 E-value=0.011 Score=58.49 Aligned_cols=123 Identities=18% Similarity=0.165 Sum_probs=91.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEE---------ccCcccccCCCHHHHHHHHHHHHHHh---CCCcEEEEecCC--------
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIV---------GGTTGEGQLMSWDEHIMLIGHTVNCF---GASVKVIGNTGS-------- 133 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v---------~GstGE~~~Lt~eEr~~li~~~~~~~---~grvpVi~gvg~-------- 133 (356)
+.....++++.+++.|+.|+.+ ||..+.-...+.+|..+-++++++.. +...-|++=+-+
T Consensus 165 ~~~~v~~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~d~~IiARTDa~~a~l~~s 244 (439)
T 3i4e_A 165 GVLNAFELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMGTPTVLVARTDAEAADLITS 244 (439)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESC
T ss_pred ccHHHHHHHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCccccccccc
Confidence 4457889999999999999987 34555566788999888887777654 445556665543
Q ss_pred -----------------------CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeC-
Q 018443 134 -----------------------NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNV- 187 (356)
Q Consensus 134 -----------------------~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~- 187 (356)
...+++|++++.+.+ |||.+++-++ .++.+++.++-+++... .+++.||.
T Consensus 245 ~~d~~d~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~-GAD~if~E~~---~~~~eei~~f~~~v~~~~P~~~l~~~~s 320 (439)
T 3i4e_A 245 DIDDNDKPYLTGERTVEGFFRTKPGLEQAISRGLAYAP-YADLIWCETG---KPDLEYAKKFAEAIHKQFPGKLLSYNCS 320 (439)
T ss_dssp CCCTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHTT-TCSEEEECCS---SCCHHHHHHHHHHHHHHSTTCEEEEECC
T ss_pred ccccccchhhcccCcccccccccCCHHHHHHHHHHHHh-hCCEEEecCC---CCCHHHHHHHHHHhcccCCceEEeeCCC
Confidence 469999999999998 9999998654 35889999999999765 45788985
Q ss_pred CCCC-CCCCCHHHH
Q 018443 188 PSRT-GQDIPPRVI 200 (356)
Q Consensus 188 P~~t-G~~ls~~~l 200 (356)
|..+ ...++++.+
T Consensus 321 Psfnw~~~~~~~~~ 334 (439)
T 3i4e_A 321 PSFNWKKNLDDATI 334 (439)
T ss_dssp SSSCHHHHSCHHHH
T ss_pred CCCcCcccCCHHHH
Confidence 5433 112555543
No 46
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=97.21 E-value=0.012 Score=56.03 Aligned_cols=123 Identities=16% Similarity=0.208 Sum_probs=86.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCc--------ccccCCCHHHHHHHHHHHHHHhC-CCcEEEEecCCC---CHHHHHH
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTT--------GEGQLMSWDEHIMLIGHTVNCFG-ASVKVIGNTGSN---STREAIH 141 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~Gst--------GE~~~Lt~eEr~~li~~~~~~~~-grvpVi~gvg~~---st~~ai~ 141 (356)
+.+...+.+..+++.|+.|+-+=+.+ |--...+.+|..+-++.+++... +...|++=+-+. ..+++|+
T Consensus 114 ~~~~v~~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~ai~ 193 (318)
T 1zlp_A 114 GPLNVQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEGIR 193 (318)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHHHHH
Confidence 77888999999999999999885554 33446788898888888888763 455566555432 2379999
Q ss_pred HHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCC-CCCCCCHHHHHHH
Q 018443 142 ATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPSR-TGQDIPPRVIHTM 203 (356)
Q Consensus 142 lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~~PiilYn~P~~-tG~~ls~~~l~~L 203 (356)
.++.++++|||++++-.+ ++.+++.++-+++. .|++. |.-.. ....++.+.+.+|
T Consensus 194 Ra~Ay~eAGAd~i~~e~~----~~~e~~~~i~~~l~--~P~la-n~~~~g~~~~~~~~eL~~l 249 (318)
T 1zlp_A 194 RANLYKEAGADATFVEAP----ANVDELKEVSAKTK--GLRIA-NMIEGGKTPLHTPEEFKEM 249 (318)
T ss_dssp HHHHHHHTTCSEEEECCC----CSHHHHHHHHHHSC--SEEEE-EECTTSSSCCCCHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcCC----CCHHHHHHHHHhcC--CCEEE-EeccCCCCCCCCHHHHHHc
Confidence 999999999999998653 46666655544442 68766 53211 1134666666665
No 47
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=97.11 E-value=0.025 Score=53.28 Aligned_cols=134 Identities=16% Similarity=0.213 Sum_probs=91.6
Q ss_pred eeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCc--------c--cccCCCHHHHHHHHHHHHHHhC-CCcEE
Q 018443 59 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTT--------G--EGQLMSWDEHIMLIGHTVNCFG-ASVKV 127 (356)
Q Consensus 59 vi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~Gst--------G--E~~~Lt~eEr~~li~~~~~~~~-grvpV 127 (356)
|++-+.|=| | +.....+.+..+++.|+.|+-+=+.+ | .-...+.+|...-++.+++... +...|
T Consensus 82 viaD~d~Gy---g--~~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i 156 (295)
T 1s2w_A 82 ILLDADTGY---G--NFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCI 156 (295)
T ss_dssp EEEECCSSC---S--SHHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEE
T ss_pred EEecCCCCC---C--CHHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEE
Confidence 555554444 2 35677888999999999999886665 3 2456778888888888888753 45556
Q ss_pred EEecCCC----CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHHH
Q 018443 128 IGNTGSN----STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHTM 203 (356)
Q Consensus 128 i~gvg~~----st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~~PiilYn~P~~tG~~ls~~~l~~L 203 (356)
++=+-+. ..+++|+.++.++++|||++++-++ .++.+++.++-+++....|++ +| |...| ..+.+.+.+|
T Consensus 157 ~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~---~~~~~~~~~i~~~~~~~~P~i-~~-~~~~~-~~~~~eL~~l 230 (295)
T 1s2w_A 157 VARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSK---KADPSDIEAFMKAWNNQGPVV-IV-PTKYY-KTPTDHFRDM 230 (295)
T ss_dssp EEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCC---SSSSHHHHHHHHHHTTCSCEE-EC-CSTTT-TSCHHHHHHH
T ss_pred EEeehHHhccccHHHHHHHHHHHHHcCCCEEEEcCC---CCCHHHHHHHHHHcCCCCCEE-Ee-CCCCC-CCCHHHHHHc
Confidence 6644332 4799999999999999999998641 235677877777775447885 45 43223 3444444444
No 48
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=97.11 E-value=0.01 Score=58.54 Aligned_cols=112 Identities=20% Similarity=0.194 Sum_probs=84.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEc---------cCcccccCCCHHHHHHHHHHHHHHh---CCCcEEEEecCC--------
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVG---------GTTGEGQLMSWDEHIMLIGHTVNCF---GASVKVIGNTGS-------- 133 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~---------GstGE~~~Lt~eEr~~li~~~~~~~---~grvpVi~gvg~-------- 133 (356)
+.....+.++.+++.|+.|+.+= |..+.-...+.+|..+=+++++++. +...-|++=+-+
T Consensus 158 ~~~nv~rtVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~g~d~vIiARTDA~~a~l~~s 237 (433)
T 3eol_A 158 DPLDAFEIMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMGTPTLIVARTDAEAAKLLTS 237 (433)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESC
T ss_pred CcHHHHHHHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCEEEEEEcCCcccccccc
Confidence 44468899999999999999883 4444556778899888887777654 345556665542
Q ss_pred -------------------------CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEe
Q 018443 134 -------------------------NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYN 186 (356)
Q Consensus 134 -------------------------~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn 186 (356)
..++++|++++.+.+ |||.+.+-++ .++.+++.++-++|... .+++.||
T Consensus 238 ~~d~rd~~fl~g~g~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~If~e~~---~~~~eei~~f~~~v~~~~P~~~L~~~ 313 (433)
T 3eol_A 238 DIDERDQPFVDYEAGRTAEGFYQVKNGIEPCIARAIAYAP-YCDLIWMETS---KPDLAQARRFAEAVHKAHPGKLLAYN 313 (433)
T ss_dssp CCSTTTGGGBCSSSCBCTTCCEEBCCSHHHHHHHHHHHGG-GCSEEEECCS---SCCHHHHHHHHHHHHHHSTTCCEEEE
T ss_pred CcccccccceeccCcccccccccccCCHHHHHHHHHHHHh-cCCEEEEeCC---CCCHHHHHHHHHHhcccCCCcccccC
Confidence 568999999999998 9999998664 45889999999999765 4578888
Q ss_pred C-CC
Q 018443 187 V-PS 189 (356)
Q Consensus 187 ~-P~ 189 (356)
. |.
T Consensus 314 ~sPs 317 (433)
T 3eol_A 314 CSPS 317 (433)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 5 53
No 49
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=96.90 E-value=0.028 Score=52.36 Aligned_cols=120 Identities=13% Similarity=0.069 Sum_probs=83.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCc--ccccCCCHHHHHHHHHHHHHHhC---CCcEEEEecCCC----------CHHH
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTT--GEGQLMSWDEHIMLIGHTVNCFG---ASVKVIGNTGSN----------STRE 138 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~Gst--GE~~~Lt~eEr~~li~~~~~~~~---grvpVi~gvg~~----------st~~ 138 (356)
+.+...+.+..+++.|+.|+-+=+.+ +.-...+.+|..+-++.+++... ....|++=+-+. ..++
T Consensus 90 ~~~~~~~~v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ 169 (275)
T 2ze3_A 90 APEDVRRTVEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAE 169 (275)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHH
Confidence 56788899999999999999987776 34567789999999998888743 234445444331 4799
Q ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHHH
Q 018443 139 AIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHTM 203 (356)
Q Consensus 139 ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~~PiilYn~P~~tG~~ls~~~l~~L 203 (356)
+|+.++.++++|||++++-.+ ++.+++.++-+++. .|+. ++. ....++.+.+.+|
T Consensus 170 ai~Ra~ay~eAGAd~i~~e~~----~~~~~~~~i~~~~~--~P~n-~~~---~~~~~~~~eL~~l 224 (275)
T 2ze3_A 170 TVRRGQAYADAGADGIFVPLA----LQSQDIRALADALR--VPLN-VMA---FPGSPVPRALLDA 224 (275)
T ss_dssp HHHHHHHHHHTTCSEEECTTC----CCHHHHHHHHHHCS--SCEE-EEC---CTTSCCHHHHHHT
T ss_pred HHHHHHHHHHCCCCEEEECCC----CCHHHHHHHHHhcC--CCEE-Eec---CCCCCCHHHHHHc
Confidence 999999999999999987553 56666655544442 6873 442 1124555444444
No 50
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=96.89 E-value=0.011 Score=55.48 Aligned_cols=132 Identities=14% Similarity=0.101 Sum_probs=89.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCc--------c--cccCCCHHHHHHHHHHHHHHhC-CCcEEEEecCC----CCHHH
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTT--------G--EGQLMSWDEHIMLIGHTVNCFG-ASVKVIGNTGS----NSTRE 138 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~Gst--------G--E~~~Lt~eEr~~li~~~~~~~~-grvpVi~gvg~----~st~~ 138 (356)
+.+...+.+..+++.|+.|+-+=+.+ | .-...+.+|..+-++.+++... +...|++=+-+ ...++
T Consensus 88 ~~~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ 167 (290)
T 2hjp_A 88 NAVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQQE 167 (290)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCHHH
T ss_pred CHHHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccHHH
Confidence 67788899999999999999886655 3 3446677788888888887642 45566665533 24899
Q ss_pred HHHHHHHHHHcCCCEEEEcC-CCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHHHhcCCCEEEEeec
Q 018443 139 AIHATEQGFAVGMHAALHIN-PYYGKTSLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKEC 215 (356)
Q Consensus 139 ai~lar~a~~~Gadavlv~p-P~y~~~s~~~l~~y~~~va~~~PiilYn~P~~tG~~ls~~~l~~La~~pnivGiK~s 215 (356)
+|+.++.++++|||++++-. + ++.+++.++-+++....|++. |.- .+..++. .+|.+..++.-+-+.
T Consensus 168 ai~Ra~ay~eAGAd~i~~e~~~----~~~~~~~~i~~~~~~~vP~i~-n~~--~~~~~~~---~eL~~lG~v~~v~~~ 235 (290)
T 2hjp_A 168 AVRRGQAYEEAGADAILIHSRQ----KTPDEILAFVKSWPGKVPLVL-VPT--AYPQLTE---ADIAALSKVGIVIYG 235 (290)
T ss_dssp HHHHHHHHHHTTCSEEEECCCC----SSSHHHHHHHHHCCCSSCEEE-CGG--GCTTSCH---HHHHTCTTEEEEEEC
T ss_pred HHHHHHHHHHcCCcEEEeCCCC----CCHHHHHHHHHHcCCCCCEEE-ecc--CCCCCCH---HHHHhcCCeeEEEec
Confidence 99999999999999999854 3 455777666666543378876 532 2233444 556555444333333
No 51
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=96.87 E-value=0.037 Score=52.04 Aligned_cols=105 Identities=18% Similarity=0.183 Sum_probs=79.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcc--------cccCCCHHHHHHHHHHHHHHhC-CCcEEEEecCC---CCHHHHHH
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTG--------EGQLMSWDEHIMLIGHTVNCFG-ASVKVIGNTGS---NSTREAIH 141 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstG--------E~~~Lt~eEr~~li~~~~~~~~-grvpVi~gvg~---~st~~ai~ 141 (356)
+.+...+.+..+++.|+.|+-+-+.++ --...+.+|..+-++.+++... +...|++=+.+ ...+++|+
T Consensus 92 ~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai~ 171 (295)
T 1xg4_A 92 SAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIE 171 (295)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHHH
Confidence 677888999999999999999877653 3346788999888988888753 45566665543 23589999
Q ss_pred HHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEE
Q 018443 142 ATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTII 184 (356)
Q Consensus 142 lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~~Piil 184 (356)
.++.++++|||++++-.+ ++.+++.++-+++ ..|++.
T Consensus 172 ra~ay~eAGAd~i~~e~~----~~~~~~~~i~~~~--~iP~~~ 208 (295)
T 1xg4_A 172 RAQAYVEAGAEMLFPEAI----TELAMYRQFADAV--QVPILA 208 (295)
T ss_dssp HHHHHHHTTCSEEEETTC----CSHHHHHHHHHHH--CSCBEE
T ss_pred HHHHHHHcCCCEEEEeCC----CCHHHHHHHHHHc--CCCEEE
Confidence 999999999999998653 4666666655555 268754
No 52
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=96.71 E-value=0.017 Score=53.24 Aligned_cols=118 Identities=17% Similarity=0.184 Sum_probs=81.5
Q ss_pred HHHHHHHHHCCCCEEEEccCcc--cccCCCHHHHHHHHHHHHHHhCC-CcE--EEEecCC---------CCHHHHHHHHH
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTG--EGQLMSWDEHIMLIGHTVNCFGA-SVK--VIGNTGS---------NSTREAIHATE 144 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstG--E~~~Lt~eEr~~li~~~~~~~~g-rvp--Vi~gvg~---------~st~~ai~lar 144 (356)
.+.+..+++.|+.|+-+=|.++ .-...+.+|..+-++.+++.... .+| |++-+.. ...+++|+.++
T Consensus 96 ~~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~ 175 (255)
T 2qiw_A 96 ADLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIK 175 (255)
T ss_dssp HHHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHHHHH
Confidence 7888889999999999877651 23456888888999888887432 345 7776653 24899999999
Q ss_pred HHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh
Q 018443 145 QGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA 204 (356)
Q Consensus 145 ~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La 204 (356)
.++++|||++++-.+ ++.+++ ++++++ .|+.+--.|...-..++.+.+++|-
T Consensus 176 a~~eAGAd~i~~e~~----~~~~~~----~~i~~~~~~P~n~~~~~~~~~p~~~~~eL~~lG 229 (255)
T 2qiw_A 176 LMEQAGARSVYPVGL----STAEQV----ERLVDAVSVPVNITAHPVDGHGAGDLATLAGLG 229 (255)
T ss_dssp HHHHHTCSEEEECCC----CSHHHH----HHHHTTCSSCBEEECBTTTBBTTBCHHHHHHTT
T ss_pred HHHHcCCcEEEEcCC----CCHHHH----HHHHHhCCCCEEEEecCCCCCCCCCHHHHHHcC
Confidence 999999999998543 455554 444554 6874432343111336677666663
No 53
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=96.62 E-value=0.23 Score=45.64 Aligned_cols=182 Identities=11% Similarity=0.060 Sum_probs=101.7
Q ss_pred ceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccccc----------------CCCHHHHHHHHHHHHHHh
Q 018443 58 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQ----------------LMSWDEHIMLIGHTVNCF 121 (356)
Q Consensus 58 Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~----------------~Lt~eEr~~li~~~~~~~ 121 (356)
..+.+.+| .|..|.+...+.++.+.+.|+|.|-+....+.-. -+|.+.-.++++.+.+.+
T Consensus 17 ~~~i~~i~----~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~ 92 (262)
T 2ekc_A 17 KALVSYLM----VGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEF 92 (262)
T ss_dssp CEEEEEEE----TTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC
T ss_pred ceEEEEec----CCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhc
Confidence 34444455 5778889999999999999999998865544311 134444456666666553
Q ss_pred CCCcEEEEecCCCCHHHH---HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCH
Q 018443 122 GASVKVIGNTGSNSTREA---IHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPP 197 (356)
Q Consensus 122 ~grvpVi~gvg~~st~~a---i~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~P~~tG~~ls~ 197 (356)
+++|+++= +..+.-.+ -+.++.+.++|+|++++. - ...+++..+.+.+.+. ..++..-.|. -+.
T Consensus 93 -~~~Pi~~m-~y~n~v~~~g~~~f~~~~~~aG~dgvii~--d---l~~ee~~~~~~~~~~~gl~~i~l~~p~-----t~~ 160 (262)
T 2ekc_A 93 -PDIPFLLM-TYYNPIFRIGLEKFCRLSREKGIDGFIVP--D---LPPEEAEELKAVMKKYVLSFVPLGAPT-----STR 160 (262)
T ss_dssp -TTSCEEEE-CCHHHHHHHCHHHHHHHHHHTTCCEEECT--T---CCHHHHHHHHHHHHHTTCEECCEECTT-----CCH
T ss_pred -CCCCEEEE-ecCcHHHHhhHHHHHHHHHHcCCCEEEEC--C---CCHHHHHHHHHHHHHcCCcEEEEeCCC-----CCH
Confidence 25787662 22222222 477888999999998873 2 2347777777666554 3332222332 445
Q ss_pred HHHHHHhc-CCCEE---------EEeecCc-h---h---hHhhhhCCCeEEEecCc-chhHhHHHHcCCceeecccc
Q 018443 198 RVIHTMAQ-SPNLA---------GVKECVG-N---D---RVEHYTGNGIVVWSGND-DQCHDARWNHGATGVISVTS 256 (356)
Q Consensus 198 ~~l~~La~-~pniv---------GiK~s~~-d---~---~i~~~~~~~~~v~~G~d-~~~l~~~l~~Ga~G~is~~~ 256 (356)
+.+.++++ ...++ |...... . . ++++.++-.+.+=.|-. ..-... +..|+||+|.|++
T Consensus 161 ~rl~~ia~~a~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~~~pv~vG~GI~t~e~~~~-~~~gADgvIVGSa 236 (262)
T 2ekc_A 161 KRIKLICEAADEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELCDKPVVVGFGVSKKEHARE-IGSFADGVVVGSA 236 (262)
T ss_dssp HHHHHHHHHCSSCEEEESSCC---------CHHHHHHHHHHHHHCCSCEEEESSCCSHHHHHH-HHTTSSEEEECHH
T ss_pred HHHHHHHHhCCCCEEEEecCCccCCCCCcCcccHHHHHHHHHhhcCCCEEEeCCCCCHHHHHH-HHcCCCEEEECHH
Confidence 67777763 33333 3332211 1 1 23333322333322332 122233 6789999998865
No 54
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=96.49 E-value=0.028 Score=52.68 Aligned_cols=120 Identities=12% Similarity=0.038 Sum_probs=85.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcc-------cccCCCHHHHHHHHHHHHHHhC-CCcEEEEecC--CCCHHHHHHHH
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTG-------EGQLMSWDEHIMLIGHTVNCFG-ASVKVIGNTG--SNSTREAIHAT 143 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstG-------E~~~Lt~eEr~~li~~~~~~~~-grvpVi~gvg--~~st~~ai~la 143 (356)
+.+...+.+..+++.|+.|+-+=+.++ .....+.+|..+-++.+++... +...|++=+- ....+++|+.+
T Consensus 95 ~~~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~~ai~Ra 174 (287)
T 3b8i_A 95 NALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQRT 174 (287)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEEechhhhcCHHHHHHHH
Confidence 778889999999999999999866652 1227899999999999998753 3555665442 33568999999
Q ss_pred HHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHH
Q 018443 144 EQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTM 203 (356)
Q Consensus 144 r~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~L 203 (356)
+.++++|||++++-.+ ++.+++. +++++ .|+++- +......++.+.+.+|
T Consensus 175 ~ay~eAGAd~i~~e~~----~~~~~~~----~i~~~~~~P~ii~--~~g~~~~~~~~eL~~l 226 (287)
T 3b8i_A 175 LAYQEAGADGICLVGV----RDFAHLE----AIAEHLHIPLMLV--TYGNPQLRDDARLARL 226 (287)
T ss_dssp HHHHHTTCSEEEEECC----CSHHHHH----HHHTTCCSCEEEE--CTTCGGGCCHHHHHHT
T ss_pred HHHHHcCCCEEEecCC----CCHHHHH----HHHHhCCCCEEEe--CCCCCCCCCHHHHHHc
Confidence 9999999999998643 4556554 44444 698842 2111124666666665
No 55
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=96.21 E-value=0.28 Score=45.12 Aligned_cols=184 Identities=14% Similarity=0.096 Sum_probs=101.7
Q ss_pred ceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccC----------------CCHHHHHHHHHHHHHHh
Q 018443 58 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQL----------------MSWDEHIMLIGHTVNCF 121 (356)
Q Consensus 58 Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~----------------Lt~eEr~~li~~~~~~~ 121 (356)
..+.+.+| .|..|.+.+.+.++.+.+.|+|.|-+....++-.. ++.+.-.++++.+.+..
T Consensus 17 ~~~i~~i~----~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~ 92 (268)
T 1qop_A 17 GAFVPFVT----LGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKH 92 (268)
T ss_dssp CEEEEEEE----TTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC
T ss_pred ceEEEEee----CCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC
Confidence 45555555 57788899999999999999999988665543111 12222335666666541
Q ss_pred CCCcEEEEecCCCCHH--HHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHH
Q 018443 122 GASVKVIGNTGSNSTR--EAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPR 198 (356)
Q Consensus 122 ~grvpVi~gvg~~st~--~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~P~~tG~~ls~~ 198 (356)
-++||++=+..+... ..-+.++.+.++|+|++.+.. . +.+++..+.+.+.+. ...+..-.|. -+.+
T Consensus 93 -~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d--~---~~e~~~~~~~~~~~~g~~~i~l~~p~-----t~~~ 161 (268)
T 1qop_A 93 -PTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVAD--V---PVEESAPFRQAALRHNIAPIFICPPN-----ADDD 161 (268)
T ss_dssp -SSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEETT--C---CGGGCHHHHHHHHHTTCEEECEECTT-----CCHH
T ss_pred -CCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEcC--C---CHHHHHHHHHHHHHcCCcEEEEECCC-----CCHH
Confidence 257865422111000 114678888899999988742 1 225566666666555 3444333442 4457
Q ss_pred HHHHHhc-CCCEEEEee---cCc--------h-h---hHhhhhCCCeEEEecCc-chhHhHHHHcCCceeecccc
Q 018443 199 VIHTMAQ-SPNLAGVKE---CVG--------N-D---RVEHYTGNGIVVWSGND-DQCHDARWNHGATGVISVTS 256 (356)
Q Consensus 199 ~l~~La~-~pnivGiK~---s~~--------d-~---~i~~~~~~~~~v~~G~d-~~~l~~~l~~Ga~G~is~~~ 256 (356)
.++++++ ...++.+=- .+| . . ++++..+-.+.+=.|-. ..-....+..|+||+|.|++
T Consensus 162 ~i~~i~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~~agAD~vVVGSa 236 (268)
T 1qop_A 162 LLRQVASYGRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAGAAGAISGSA 236 (268)
T ss_dssp HHHHHHHHCCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHTTCCCEEEESSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHhhCCCcEEEEecCCcCCCccCCCchHHHHHHHHHhccCCcEEEECCCCCHHHHHHHHHcCCCEEEEChH
Confidence 7777774 444443310 011 1 1 23333322233322332 11122336789999999875
No 56
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=95.72 E-value=0.17 Score=46.55 Aligned_cols=161 Identities=14% Similarity=0.180 Sum_probs=95.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec-------CCCCHHHHHHHHHHH
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-------GSNSTREAIHATEQG 146 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv-------g~~st~~ai~lar~a 146 (356)
.++.++++++..++.|++++++.-+ +++.+. ..++++++.+ +...++.-+.-++.|
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~~~--------------~v~~~~---~~~~~liv~~~~~~~~~g~~~~~~~~~~ve~A 101 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQRG--------------IAEKYY---DGSVPLILKLNGKTTLYNGEPVSVANCSVEEA 101 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEECHH--------------HHHHHC---CSSSCEEEECEECCTTCCSSCCCEESSCHHHH
T ss_pred chhhHHHHHHHHHhhCCCEEEECHH--------------HHHHhh---cCCCcEEEEEeCCCCcCCCCccchHHHHHHHH
Confidence 4677889999999999999987622 233333 3346666543 222233334567888
Q ss_pred HHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-----CCeEEEeCCCCCCCCC----CHHHHHHH---hc-C-CCEEEE
Q 018443 147 FAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-----GPTIIYNVPSRTGQDI----PPRVIHTM---AQ-S-PNLAGV 212 (356)
Q Consensus 147 ~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-----~PiilYn~P~~tG~~l----s~~~l~~L---a~-~-pnivGi 212 (356)
.+.|||++-+.- ++...+.+++.+..+++.+. .|+|+-..+ -|.++ +++.+.+. +. . ..++++
T Consensus 102 i~~Ga~~v~~~~-nig~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~--~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt 178 (263)
T 1w8s_A 102 VSLGASAVGYTI-YPGSGFEWKMFEELARIKRDAVKFDLPLVVESFP--RGGKVVNETAPEIVAYAARIALELGADAMKI 178 (263)
T ss_dssp HHTTCSEEEEEE-CTTSTTHHHHHHHHHHHHHHHHHHTCCEEEEECC--CSTTCCCTTCHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHCCCCEEEEEE-ecCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeeC--CCCccccCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 899999997753 44456677788888887653 698886555 24444 77777554 42 2 455555
Q ss_pred eecCchhh---HhhhhCC-CeEEEecCc--c--h---hHhHHHHcCCceeecc
Q 018443 213 KECVGNDR---VEHYTGN-GIVVWSGND--D--Q---CHDARWNHGATGVISV 254 (356)
Q Consensus 213 K~s~~d~~---i~~~~~~-~~~v~~G~d--~--~---~l~~~l~~Ga~G~is~ 254 (356)
..+.+-+. +.+..+. .+....|-. + . .+...+..|++|+..+
T Consensus 179 ~~~~~~e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~Gvsvg 231 (263)
T 1w8s_A 179 KYTGDPKTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVG 231 (263)
T ss_dssp ECCSSHHHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEES
T ss_pred cCCCCHHHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 54321122 3333333 444444543 1 1 2222357899988766
No 57
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=95.71 E-value=0.033 Score=52.29 Aligned_cols=86 Identities=13% Similarity=0.141 Sum_probs=62.2
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCC----------------------HHHHHHHHHHHHHHhCCCcEEEEe
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMS----------------------WDEHIMLIGHTVNCFGASVKVIGN 130 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt----------------------~eEr~~li~~~~~~~~grvpVi~g 130 (356)
+|.+.+.+.++.+.+.|+++|.+.+++++...++ ...-.+.++.+.+.+++++|||+.
T Consensus 169 ~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~ 248 (311)
T 1jub_A 169 FDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGT 248 (311)
T ss_dssp CSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEE
Confidence 5778888889999999999999988874321111 122356677777777778999876
Q ss_pred cCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCC
Q 018443 131 TGSNSTREAIHATEQGFAVGMHAALHINPYYG 162 (356)
Q Consensus 131 vg~~st~~ai~lar~a~~~Gadavlv~pP~y~ 162 (356)
=|=.+.+++.+.. .+|||+|++-.+...
T Consensus 249 GGI~~~~da~~~l----~~GAd~V~vg~~~l~ 276 (311)
T 1jub_A 249 GGIETGQDAFEHL----LCGATMLQIGTALHK 276 (311)
T ss_dssp SSCCSHHHHHHHH----HHTCSEEEECHHHHH
T ss_pred CCCCCHHHHHHHH----HcCCCEEEEchHHHh
Confidence 5555677777765 369999999888664
No 58
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=95.64 E-value=0.051 Score=53.49 Aligned_cols=85 Identities=19% Similarity=0.225 Sum_probs=64.2
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccC----------CC----HHHHHHHHHHHHHHhCCCcEEEEecCCCCHHH
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQL----------MS----WDEHIMLIGHTVNCFGASVKVIGNTGSNSTRE 138 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~----------Lt----~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ 138 (356)
+|.+.+..+++.+.+.|++||++.++|++-.. || ..--.+++..+.+.+++++|||+.=|=.+.++
T Consensus 280 ~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eD 359 (415)
T 3i65_A 280 LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLD 359 (415)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHH
Confidence 45667899999999999999999999875321 22 23345788888888888999986555556777
Q ss_pred HHHHHHHHHHcCCCEEEEcCCCC
Q 018443 139 AIHATEQGFAVGMHAALHINPYY 161 (356)
Q Consensus 139 ai~lar~a~~~Gadavlv~pP~y 161 (356)
+.+..+ +|||+|++-.+..
T Consensus 360 a~e~l~----aGAd~VqIgra~l 378 (415)
T 3i65_A 360 ALEKIE----AGASVCQLYSCLV 378 (415)
T ss_dssp HHHHHH----HTEEEEEESHHHH
T ss_pred HHHHHH----cCCCEEEEcHHHH
Confidence 776654 6999999988754
No 59
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=95.63 E-value=0.068 Score=53.09 Aligned_cols=85 Identities=19% Similarity=0.228 Sum_probs=63.7
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCC----------C----HHHHHHHHHHHHHHhCCCcEEEEecCCCCHHH
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLM----------S----WDEHIMLIGHTVNCFGASVKVIGNTGSNSTRE 138 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~L----------t----~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ 138 (356)
++.+.+..+++.+.+.|+|||.+.++|.+...+ | ..--.+++..+.+.+++++|||+.=|=.+.++
T Consensus 308 ~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~D 387 (443)
T 1tv5_A 308 LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLD 387 (443)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHH
Confidence 566688899999999999999999998743221 1 12235778888888888999986544456777
Q ss_pred HHHHHHHHHHcCCCEEEEcCCCC
Q 018443 139 AIHATEQGFAVGMHAALHINPYY 161 (356)
Q Consensus 139 ai~lar~a~~~Gadavlv~pP~y 161 (356)
+.+..+ +|||+|++-.++.
T Consensus 388 A~e~l~----aGAd~Vqigrall 406 (443)
T 1tv5_A 388 ALEKIE----AGASVCQLYSCLV 406 (443)
T ss_dssp HHHHHH----TTEEEEEESHHHH
T ss_pred HHHHHH----cCCCEEEEcHHHH
Confidence 776663 7999999988744
No 60
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=95.62 E-value=0.15 Score=46.50 Aligned_cols=173 Identities=15% Similarity=0.135 Sum_probs=98.1
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccCccc----------------ccCCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Q 018443 70 DGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGE----------------GQLMSWDEHIMLIGHTVNCFGASVKVIGNTGS 133 (356)
Q Consensus 70 dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE----------------~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~ 133 (356)
.|..|.+.+.+.++.+.+.|+|.|-+....++ ..-++.++-.++++.+.+. -++|+++-+..
T Consensus 26 ~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~--~~~Pv~~m~~~ 103 (262)
T 1rd5_A 26 AGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE--LSCPVVLLSYY 103 (262)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG--CSSCEEEECCS
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc--CCCCEEEEecC
Confidence 45567899999999999999999987544332 1225778778888877765 36787764322
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHhc-CCCEEE
Q 018443 134 NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMAQ-SPNLAG 211 (356)
Q Consensus 134 ~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~P~~tG~~ls~~~l~~La~-~pnivG 211 (356)
+... ....+.+.++|+|++.+. .- +.+++.++...+.+. .+.++.=.|. -+.+.++++.+ ...+++
T Consensus 104 -~~~~-~~~~~~a~~aGadgv~v~--d~---~~~~~~~~~~~~~~~g~~~i~~~a~~-----t~~e~~~~~~~~~~g~v~ 171 (262)
T 1rd5_A 104 -KPIM-FRSLAKMKEAGVHGLIVP--DL---PYVAAHSLWSEAKNNNLELVLLTTPA-----IPEDRMKEITKASEGFVY 171 (262)
T ss_dssp -HHHH-SCCTHHHHHTTCCEEECT--TC---BTTTHHHHHHHHHHTTCEECEEECTT-----SCHHHHHHHHHHCCSCEE
T ss_pred -cHHH-HHHHHHHHHcCCCEEEEc--CC---ChhhHHHHHHHHHHcCCceEEEECCC-----CCHHHHHHHHhcCCCeEE
Confidence 2211 111233889999999873 11 124466666666555 4544333342 33566666653 334443
Q ss_pred E---------eecCchh------hHhhhhCCCeEEEecCc-chhHhHHHHcCCceeecccc
Q 018443 212 V---------KECVGND------RVEHYTGNGIVVWSGND-DQCHDARWNHGATGVISVTS 256 (356)
Q Consensus 212 i---------K~s~~d~------~i~~~~~~~~~v~~G~d-~~~l~~~l~~Ga~G~is~~~ 256 (356)
+ |...... ++++..+-.+.+-.|-. ..-....+..|++|++.|++
T Consensus 172 ~~s~~G~tG~~~~~~~~~~~~i~~v~~~~~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSa 232 (262)
T 1rd5_A 172 LVSVNGVTGPRANVNPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWGADGVIIGSA 232 (262)
T ss_dssp EECSSCCBCTTSCBCTHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEECHH
T ss_pred EecCCCCCCCCcCCCchHHHHHHHHHhhcCCeEEEECCcCCHHHHHHHHHcCCCEEEEChH
Confidence 3 1111111 12222233344434443 22233446789999998865
No 61
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=95.50 E-value=0.076 Score=50.37 Aligned_cols=85 Identities=15% Similarity=0.135 Sum_probs=60.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccc------------cCCC----HHHHHHHHHHHHHHhCCCcEEEEecCCCCH
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEG------------QLMS----WDEHIMLIGHTVNCFGASVKVIGNTGSNST 136 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~------------~~Lt----~eEr~~li~~~~~~~~grvpVi~gvg~~st 136 (356)
++.+.+.++++.+.+.|+++|.+.+++... .-++ ..-..++++.+.+.+++++|||+.=|=.+.
T Consensus 222 ~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~ 301 (336)
T 1f76_A 222 LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSV 301 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCH
Confidence 667788899999999999999988775311 1122 223457777888888888999865444456
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCCC
Q 018443 137 REAIHATEQGFAVGMHAALHINPYY 161 (356)
Q Consensus 137 ~~ai~lar~a~~~Gadavlv~pP~y 161 (356)
+++.+..+ .|||+|++..++.
T Consensus 302 ~da~~~l~----~GAd~V~igr~~l 322 (336)
T 1f76_A 302 IAAREKIA----AGASLVQIYSGFI 322 (336)
T ss_dssp HHHHHHHH----HTCSEEEESHHHH
T ss_pred HHHHHHHH----CCCCEEEeeHHHH
Confidence 66665553 6999999987654
No 62
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=95.48 E-value=0.076 Score=49.86 Aligned_cols=105 Identities=11% Similarity=-0.005 Sum_probs=76.9
Q ss_pred HHHHHHHHCCCCEEEEccCccccc-----CCCHHHHHHHHHHHHHHhCC-CcEEEEec---C------CCCHHHHHHHHH
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGEGQ-----LMSWDEHIMLIGHTVNCFGA-SVKVIGNT---G------SNSTREAIHATE 144 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE~~-----~Lt~eEr~~li~~~~~~~~g-rvpVi~gv---g------~~st~~ai~lar 144 (356)
+.++..+++|++.+.+..++.|.+ .+|.+|-.+.++.+++.+.. .+.|-+.+ . ..+.++++++++
T Consensus 87 ~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~ 166 (302)
T 2ftp_A 87 KGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVAR 166 (302)
T ss_dssp HHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHH
T ss_pred HHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHH
Confidence 566777889999999888888864 48999998888888886542 34553222 1 246889999999
Q ss_pred HHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcC---CeEEE
Q 018443 145 QGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG---PTIIY 185 (356)
Q Consensus 145 ~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~~---PiilY 185 (356)
.+.+.|+|.+.+.. ..+..+++++.+.+++|.+.. |+.++
T Consensus 167 ~~~~~G~d~i~l~D-T~G~~~P~~~~~lv~~l~~~~~~~~l~~H 209 (302)
T 2ftp_A 167 ELQQMGCYEVSLGD-TIGVGTAGATRRLIEAVASEVPRERLAGH 209 (302)
T ss_dssp HHHHTTCSEEEEEE-SSSCCCHHHHHHHHHHHTTTSCGGGEEEE
T ss_pred HHHHcCCCEEEEeC-CCCCcCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 99999999887663 345567888888888888764 45544
No 63
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=95.40 E-value=0.35 Score=46.21 Aligned_cols=128 Identities=10% Similarity=-0.003 Sum_probs=79.4
Q ss_pred CCCHHHHHHHHH-------HHHHCCCCEEEEccCccc---------------ccCCCHHHHH----HHHHHHHHHhCCCc
Q 018443 72 RFDLEAYDDLVN-------MQIVNGAEGMIVGGTTGE---------------GQLMSWDEHI----MLIGHTVNCFGASV 125 (356)
Q Consensus 72 ~ID~~~l~~~v~-------~li~~Gv~Gl~v~GstGE---------------~~~Lt~eEr~----~li~~~~~~~~grv 125 (356)
.+..+.+++.++ ...++|.|||=+.+..|- -+-=|.+.|. ++++.+.+.++.+.
T Consensus 141 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~ 220 (349)
T 3hgj_A 141 PLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPREL 220 (349)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 355555555554 456789999998887641 1122567775 45556666666677
Q ss_pred EEEEecC-------CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCC----C-CHHHHHHHHHHHHhc--CCeEEEeCCCCC
Q 018443 126 KVIGNTG-------SNSTREAIHATEQGFAVGMHAALHINPYYGK----T-SLEGLISHFDSVLSM--GPTIIYNVPSRT 191 (356)
Q Consensus 126 pVi~gvg-------~~st~~ai~lar~a~~~Gadavlv~pP~y~~----~-s~~~l~~y~~~va~~--~PiilYn~P~~t 191 (356)
||.+=++ +.+.++++++++..++.|+|.+-+....+.. + .+..-..+.+.|.+. .||+. .
T Consensus 221 pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~------~ 294 (349)
T 3hgj_A 221 PLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGA------V 294 (349)
T ss_dssp CEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEE------C
T ss_pred eEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEE------E
Confidence 8877443 4578999999999999999999887532211 0 111123445555554 46553 2
Q ss_pred CCCCCHHHHHHHhc
Q 018443 192 GQDIPPRVIHTMAQ 205 (356)
Q Consensus 192 G~~ls~~~l~~La~ 205 (356)
|---+++..+++.+
T Consensus 295 Ggi~t~e~a~~~l~ 308 (349)
T 3hgj_A 295 GLITTPEQAETLLQ 308 (349)
T ss_dssp SSCCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHH
Confidence 33346777777664
No 64
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=95.24 E-value=0.082 Score=51.20 Aligned_cols=84 Identities=20% Similarity=0.217 Sum_probs=63.0
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccc------------cCCC----HHHHHHHHHHHHHHhCCCcEEEEecCCCCH
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEG------------QLMS----WDEHIMLIGHTVNCFGASVKVIGNTGSNST 136 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~------------~~Lt----~eEr~~li~~~~~~~~grvpVi~gvg~~st 136 (356)
+|.+.+...++.+.+.|++||.+-++|-.. --|| ..--.+++..+.+.+++++|||+.=|=.+.
T Consensus 231 ~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~ 310 (367)
T 3zwt_A 231 LTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSG 310 (367)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCH
Confidence 566788999999999999999998877321 1122 223357888888888889999875555567
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCC
Q 018443 137 REAIHATEQGFAVGMHAALHINPY 160 (356)
Q Consensus 137 ~~ai~lar~a~~~Gadavlv~pP~ 160 (356)
+++.+..+ +|||+|++-.+.
T Consensus 311 ~da~~~l~----~GAd~V~vgra~ 330 (367)
T 3zwt_A 311 QDALEKIR----AGASLVQLYTAL 330 (367)
T ss_dssp HHHHHHHH----HTCSEEEESHHH
T ss_pred HHHHHHHH----cCCCEEEECHHH
Confidence 77777664 699999998876
No 65
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=95.23 E-value=0.071 Score=49.56 Aligned_cols=125 Identities=13% Similarity=0.030 Sum_probs=85.2
Q ss_pred eecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCC---------
Q 018443 63 IKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGS--------- 133 (356)
Q Consensus 63 l~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~--------- 133 (356)
.=|||-. -..+.+..-+.+..+++.|++++-+=|. +|..+.++.+++ .++||++++|-
T Consensus 83 aD~pfgs-y~~s~~~a~~na~rl~kaGa~aVklEdg---------~e~~~~I~al~~---agIpV~gHiGLtPQs~~~~g 149 (275)
T 1o66_A 83 SDLPFGA-YQQSKEQAFAAAAELMAAGAHMVKLEGG---------VWMAETTEFLQM---RGIPVCAHIGLTPQSVFAFG 149 (275)
T ss_dssp EECCTTS-SSSCHHHHHHHHHHHHHTTCSEEEEECS---------GGGHHHHHHHHH---TTCCEEEEEESCGGGTTC--
T ss_pred EECCCCC-ccCCHHHHHHHHHHHHHcCCcEEEECCc---------HHHHHHHHHHHH---cCCCeEeeeccCceeecccC
Confidence 5688842 3467788888888899999999988775 255555555543 47888865541
Q ss_pred --------CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeC-CCCCCCCCCHHHHHH
Q 018443 134 --------NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNV-PSRTGQDIPPRVIHT 202 (356)
Q Consensus 134 --------~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~-P~~tG~~ls~~~l~~ 202 (356)
...+++++.++..+++|||++++-.. .. ++ .++|.++ +|++-.-. |...|..|=...+.-
T Consensus 150 gf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~v-----p~-~~---a~~it~~l~iP~igIGaG~~~dgQvLV~~D~lG 220 (275)
T 1o66_A 150 GYKVQGRGGKAQALLNDAKAHDDAGAAVVLMECV-----LA-EL---AKKVTETVSCPTIGIGAGADCDGQVLVMHDMLG 220 (275)
T ss_dssp ---------CHHHHHHHHHHHHHTTCSEEEEESC-----CH-HH---HHHHHHHCSSCEEEESSCSCSSEEEECHHHHTT
T ss_pred CeEEEeChHHHHHHHHHHHHHHHcCCcEEEEecC-----CH-HH---HHHHHHhCCCCEEEECCCCCCCcceeeHHhhcC
Confidence 23589999999999999999988653 22 33 3577776 68887664 555666665555544
Q ss_pred Hh-c-CCCE
Q 018443 203 MA-Q-SPNL 209 (356)
Q Consensus 203 La-~-~pni 209 (356)
|. + .|.+
T Consensus 221 ~~~~~~pkf 229 (275)
T 1o66_A 221 IFPGKTAKF 229 (275)
T ss_dssp CSSSSCCTT
T ss_pred CCCCCCCCc
Confidence 54 2 4666
No 66
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=95.02 E-value=0.072 Score=49.24 Aligned_cols=125 Identities=14% Similarity=0.104 Sum_probs=84.4
Q ss_pred eeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCC-------
Q 018443 62 AIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN------- 134 (356)
Q Consensus 62 al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~------- 134 (356)
..=|||-.-+ +.+..-+.+..+++.|++++-+=|. +|..+.++.+++ .++||++++|-+
T Consensus 82 vaD~pfgsy~--~~~~a~~~a~rl~kaGa~aVklEgg---------~e~~~~I~al~~---agipV~gHiGLtPq~v~~~ 147 (264)
T 1m3u_A 82 LADLPFMAYA--TPEQAFENAATVMRAGANMVKIEGG---------EWLVETVQMLTE---RAVPVCGHLGLTPQSVNIF 147 (264)
T ss_dssp EEECCTTSSS--SHHHHHHHHHHHHHTTCSEEECCCS---------GGGHHHHHHHHH---TTCCEEEEEESCGGGHHHH
T ss_pred EEECCCCCcC--CHHHHHHHHHHHHHcCCCEEEECCc---------HHHHHHHHHHHH---CCCCeEeeecCCceeeccc
Confidence 3668995433 7788888888999999999988775 255555555543 468998654422
Q ss_pred -----------CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeC-CCCCCCCCCHHHH
Q 018443 135 -----------STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNV-PSRTGQDIPPRVI 200 (356)
Q Consensus 135 -----------st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~-P~~tG~~ls~~~l 200 (356)
..+++++.++..+++|||++++-.. .. ++ .++|.++ +|++-.-. |...|..|=...+
T Consensus 148 ggf~v~grt~~~a~~~i~rA~a~~eAGA~~ivlE~v-----p~-~~---a~~it~~l~iP~igIGag~~~dgQvLV~~D~ 218 (264)
T 1m3u_A 148 GGYKVQGRGDEAGDQLLSDALALEAAGAQLLVLECV-----PV-EL---AKRITEALAIPVIGIGAGNVTDGQILVMHDA 218 (264)
T ss_dssp TSSCCCCCSHHHHHHHHHHHHHHHHHTCCEEEEESC-----CH-HH---HHHHHHHCSSCEEEESSCTTSSEEEECHHHH
T ss_pred CCeEEEeCCHHHHHHHHHHHHHHHHCCCcEEEEecC-----CH-HH---HHHHHHhCCCCEEEeCCCCCCCcceeeHHhh
Confidence 2478899999999999999988652 22 33 3577776 68887654 5555666555444
Q ss_pred HHHh-c-CCCE
Q 018443 201 HTMA-Q-SPNL 209 (356)
Q Consensus 201 ~~La-~-~pni 209 (356)
.-|. + .|.+
T Consensus 219 lG~~~~~~pkf 229 (264)
T 1m3u_A 219 FGITGGHIPKF 229 (264)
T ss_dssp TTCSCSSCCTT
T ss_pred cCCCCCCCCCc
Confidence 4444 2 3555
No 67
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=94.71 E-value=0.21 Score=46.52 Aligned_cols=106 Identities=16% Similarity=0.133 Sum_probs=75.3
Q ss_pred HHHHHHHHHCCCCEEEEccCccccc-----CCCHHHHHHHHHHHHHHhC-CCcEEE--Eec-------CCCCHHHHHHHH
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTGEGQ-----LMSWDEHIMLIGHTVNCFG-ASVKVI--GNT-------GSNSTREAIHAT 143 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstGE~~-----~Lt~eEr~~li~~~~~~~~-grvpVi--~gv-------g~~st~~ai~la 143 (356)
.+.++..++.|++.+.+..+++|.+ .+|.+|-.+.++.+++.+. ..++|- ++. +..+.++.++++
T Consensus 82 ~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~ 161 (295)
T 1ydn_A 82 MKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVT 161 (295)
T ss_dssp HHHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHH
Confidence 3556677788999998877666543 4688888777777777543 244554 232 234789999999
Q ss_pred HHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcC---CeEEE
Q 018443 144 EQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG---PTIIY 185 (356)
Q Consensus 144 r~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~~---PiilY 185 (356)
+.+.+.|+|.+.+.. ..+..+++++.+.++.+.+.. |+.++
T Consensus 162 ~~~~~~G~d~i~l~D-t~G~~~P~~~~~lv~~l~~~~~~~~l~~H 205 (295)
T 1ydn_A 162 EQLFSLGCHEVSLGD-TIGRGTPDTVAAMLDAVLAIAPAHSLAGH 205 (295)
T ss_dssp HHHHHHTCSEEEEEE-TTSCCCHHHHHHHHHHHHTTSCGGGEEEE
T ss_pred HHHHhcCCCEEEecC-CCCCcCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 999999999888775 345567888888888888764 45444
No 68
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=94.69 E-value=1.1 Score=41.37 Aligned_cols=173 Identities=14% Similarity=0.105 Sum_probs=100.9
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccCc------ccc----------cCCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Q 018443 70 DGRFDLEAYDDLVNMQIVNGAEGMIVGGTT------GEG----------QLMSWDEHIMLIGHTVNCFGASVKVIGNTGS 133 (356)
Q Consensus 70 dg~ID~~~l~~~v~~li~~Gv~Gl~v~Gst------GE~----------~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~ 133 (356)
-|.-|++.+.+.++.+.++|+|.|=+.=-. |.. .-+|.+.-.++++.+.+. ..++|++.=+..
T Consensus 26 aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~-~~~~Pivlm~Y~ 104 (267)
T 3vnd_A 26 IGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQ-HPDMPIGLLLYA 104 (267)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-CTTCCEEEEECH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCCEEEEecC
Confidence 577899999999999999999999765111 110 114555556666666554 136787654333
Q ss_pred CCHH--HHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHhc-CCCE
Q 018443 134 NSTR--EAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMAQ-SPNL 209 (356)
Q Consensus 134 ~st~--~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~P~~tG~~ls~~~l~~La~-~pni 209 (356)
|... ..-++++.++++|+|++++.. . ..++..++.+.+.+. +..+..=.|. -+.+.++++++ .+.+
T Consensus 105 npv~~~g~e~f~~~~~~aGvdgvii~D--l---p~ee~~~~~~~~~~~gl~~i~liaP~-----t~~eri~~i~~~~~gf 174 (267)
T 3vnd_A 105 NLVFANGIDEFYTKAQAAGVDSVLIAD--V---PVEESAPFSKAAKAHGIAPIFIAPPN-----ADADTLKMVSEQGEGY 174 (267)
T ss_dssp HHHHHHCHHHHHHHHHHHTCCEEEETT--S---CGGGCHHHHHHHHHTTCEEECEECTT-----CCHHHHHHHHHHCCSC
T ss_pred cHHHHhhHHHHHHHHHHcCCCEEEeCC--C---CHhhHHHHHHHHHHcCCeEEEEECCC-----CCHHHHHHHHHhCCCc
Confidence 3221 135688999999999998832 1 225566666666555 3333333442 24678888875 4556
Q ss_pred EEE---eecCch-----h-------hHhhhhCCCeEEEecCc----chhHhHHHHcCCceeecccc
Q 018443 210 AGV---KECVGN-----D-------RVEHYTGNGIVVWSGND----DQCHDARWNHGATGVISVTS 256 (356)
Q Consensus 210 vGi---K~s~~d-----~-------~i~~~~~~~~~v~~G~d----~~~l~~~l~~Ga~G~is~~~ 256 (356)
+.+ .-.+|. . ++++.. +.-+..|.. +.+ ...+..|+||+|.|++
T Consensus 175 vY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~--~~pv~vGfGI~~~e~~-~~~~~~gADgvVVGSa 237 (267)
T 3vnd_A 175 TYLLSRAGVTGTESKAGEPIENILTQLAEFN--APPPLLGFGIAEPEQV-RAAIKAGAAGAISGSA 237 (267)
T ss_dssp EEESCCCCCC--------CHHHHHHHHHTTT--CCCEEECSSCCSHHHH-HHHHHTTCSEEEECHH
T ss_pred EEEEecCCCCCCccCCcHHHHHHHHHHHHhc--CCCEEEECCcCCHHHH-HHHHHcCCCEEEECHH
Confidence 655 221221 1 122222 344555543 222 2136899999999864
No 69
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=94.66 E-value=0.34 Score=45.54 Aligned_cols=167 Identities=14% Similarity=0.114 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHH--HHhCCCcEEEEecCCCC-H-----HH-HH---HH
Q 018443 75 LEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTV--NCFGASVKVIGNTGSNS-T-----RE-AI---HA 142 (356)
Q Consensus 75 ~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~--~~~~grvpVi~gvg~~s-t-----~~-ai---~l 142 (356)
+..+++++...++.|++||++-...|+ ..+. .....++++|++..+.+ . .+ .+ .-
T Consensus 47 l~~~k~lv~~~~~~~~~avl~~~g~~~-------------~a~~~~~~~~~~~glil~l~~~~~l~~~~~~~~l~~~~~~ 113 (304)
T 1to3_A 47 LTDFKVNAAKILSPYASAVLLDQQFCY-------------RQAVEQNAVAKSCAMIVAADDFIPGNGIPVDNVVLDKKIN 113 (304)
T ss_dssp HHHHHHHHHHHHGGGCSEEEECTTTTH-------------HHHHHTTCSCTTSEEEEECEEEEEETTEEEEEEEECSSCC
T ss_pred hhhHHHHHHHHHhcCCCEEEeCHHHHH-------------HHhhcccccCCCCcEEEEECCCCCCCCCccchhhccCchh
Confidence 688999999999999999998776665 1111 12455788888874311 1 11 33 56
Q ss_pred HHHHHHcCCCEEEEcCCCCCCC-CHHHHHHHHHHHHhc-----CCeEEEeCCC--CCCCCCCH-HHHHHH---h-cC-CC
Q 018443 143 TEQGFAVGMHAALHINPYYGKT-SLEGLISHFDSVLSM-----GPTIIYNVPS--RTGQDIPP-RVIHTM---A-QS-PN 208 (356)
Q Consensus 143 ar~a~~~Gadavlv~pP~y~~~-s~~~l~~y~~~va~~-----~PiilYn~P~--~tG~~ls~-~~l~~L---a-~~-pn 208 (356)
+++|.+.|||+|-++- ||.+. ++.+.++..+++.+. .|+++--+|. ..+.+-++ +.+.+- + +. ..
T Consensus 114 ve~a~~~GAdaV~vlv-~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD 192 (304)
T 1to3_A 114 AQAVKRDGAKALKLLV-LWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGAD 192 (304)
T ss_dssp HHHHHHTTCCEEEEEE-EECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCS
T ss_pred HHHHHHcCCCEEEEEE-EcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCC
Confidence 7788889999998664 33332 356666666666553 5876554432 22333455 555542 2 33 35
Q ss_pred EEEEeecC---ch-h---hHhhh----hCCCeEEEecCcch-----hHhHHHHcCCceeeccc
Q 018443 209 LAGVKECV---GN-D---RVEHY----TGNGIVVWSGNDDQ-----CHDARWNHGATGVISVT 255 (356)
Q Consensus 209 ivGiK~s~---~d-~---~i~~~----~~~~~~v~~G~d~~-----~l~~~l~~Ga~G~is~~ 255 (356)
+++++... ++ . ++.+. +.-.+.|+.|.... .+...+..|++|++.|-
T Consensus 193 ~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~vGR 255 (304)
T 1to3_A 193 LYKVEMPLYGKGARSDLLTASQRLNGHINMPWVILSSGVDEKLFPRAVRVAMEAGASGFLAGR 255 (304)
T ss_dssp EEEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEESH
T ss_pred EEEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEEecCCCHHHHHHHHHHHHHcCCeEEEEeh
Confidence 76676641 12 1 22222 33343445553321 12334688999999874
No 70
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=94.66 E-value=0.059 Score=52.69 Aligned_cols=94 Identities=15% Similarity=0.161 Sum_probs=62.3
Q ss_pred HHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCC
Q 018443 81 LVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPY 160 (356)
Q Consensus 81 ~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP~ 160 (356)
.++.+.+.|+++|.+.|..|....-.. -..+.+..+++.+++++|||+.=|=.+-.++++. ..+|||+|++--|+
T Consensus 265 ~A~~a~~aGad~I~vs~~ggr~~~~g~-~~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~ka----lalGAd~V~iGr~~ 339 (392)
T 2nzl_A 265 DAREAVKHGLNGILVSNHGARQLDGVP-ATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKA----LALGAKAVFVGRPI 339 (392)
T ss_dssp HHHHHHHTTCCEEEECCGGGTSSTTCC-CHHHHHHHHHHHHTTSSEEEECSSCCSHHHHHHH----HHTTCSEEEECHHH
T ss_pred HHHHHHHcCCCEEEeCCCCCCcCCCCc-ChHHHHHHHHHHcCCCCEEEEECCCCCHHHHHHH----HHhCCCeeEECHHH
Confidence 467788999999999887774322111 1234555666677778999985554556665543 34799999999997
Q ss_pred CCCC---CHHHHHHHHHHHHhc
Q 018443 161 YGKT---SLEGLISHFDSVLSM 179 (356)
Q Consensus 161 y~~~---s~~~l~~y~~~va~~ 179 (356)
++.. .++++.++++.+.+.
T Consensus 340 l~~~~~~g~~gv~~~l~~l~~e 361 (392)
T 2nzl_A 340 VWGLAFQGEKGVQDVLEILKEE 361 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcChHHHHHHHHHHHHH
Confidence 7542 345666666666543
No 71
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=94.64 E-value=0.052 Score=52.60 Aligned_cols=95 Identities=16% Similarity=0.135 Sum_probs=62.1
Q ss_pred HHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 159 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP 159 (356)
..++.+.+.|+++|.+.|+.|....-... -.+.+..+++.+++++|||+.=|=.+..++++. ..+|||+|++-.|
T Consensus 241 e~a~~a~~~Gad~I~vs~~ggr~~~~g~~-~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~ka----lalGAd~V~iGr~ 315 (368)
T 2nli_A 241 EDADMAIKRGASGIWVSNHGARQLYEAPG-SFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKA----LASGADVVALGRP 315 (368)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSCSSCCC-HHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHH----HHTTCSEEEECHH
T ss_pred HHHHHHHHcCCCEEEEcCCCcCCCCCCCC-hHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHH----HHcCCCEEEECHH
Confidence 34567789999999998877732211111 225555666667778999986555556665543 4589999999998
Q ss_pred CCCCC---CHHHHHHHHHHHHhc
Q 018443 160 YYGKT---SLEGLISHFDSVLSM 179 (356)
Q Consensus 160 ~y~~~---s~~~l~~y~~~va~~ 179 (356)
+.+.. .++++.++++.+.+.
T Consensus 316 ~l~~~~~~G~~gv~~~l~~l~~e 338 (368)
T 2nli_A 316 VLFGLALGGWQGAYSVLDYFQKD 338 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcChHHHHHHHHHHHHH
Confidence 76542 345666666555543
No 72
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=94.48 E-value=0.18 Score=47.08 Aligned_cols=84 Identities=10% Similarity=-0.046 Sum_probs=63.7
Q ss_pred CCHHHHHHHHHHHHHCCCC-EEEEccCc----ccccCC-CHHHHHHHHHHHHHHhCCCcEEEEecCC-CCHHHHHHHHHH
Q 018443 73 FDLEAYDDLVNMQIVNGAE-GMIVGGTT----GEGQLM-SWDEHIMLIGHTVNCFGASVKVIGNTGS-NSTREAIHATEQ 145 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~-Gl~v~Gst----GE~~~L-t~eEr~~li~~~~~~~~grvpVi~gvg~-~st~~ai~lar~ 145 (356)
-+.+.+.+.++.+.+.|++ +|-++-++ |.-... +.+...++++.+.+.+ ++||++=+.. .+.++..++++.
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~--~~Pv~vKi~~~~~~~~~~~~a~~ 180 (311)
T 1jub_A 103 MSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFF--TKPLGVKLPPYFDLVHFDIMAEI 180 (311)
T ss_dssp SSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTC--CSCEEEEECCCCSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhc--CCCEEEEECCCCCHHHHHHHHHH
Confidence 4788999999999999999 99886541 211122 6777777787776654 5798875543 367788899999
Q ss_pred HHHcCCCEEEEcC
Q 018443 146 GFAVGMHAALHIN 158 (356)
Q Consensus 146 a~~~Gadavlv~p 158 (356)
++++|+|++.+..
T Consensus 181 ~~~~G~d~i~v~~ 193 (311)
T 1jub_A 181 LNQFPLTYVNSVN 193 (311)
T ss_dssp HTTSCCCEEEECC
T ss_pred HHHcCCcEEEecC
Confidence 9999999998865
No 73
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=94.39 E-value=0.11 Score=48.56 Aligned_cols=85 Identities=13% Similarity=0.108 Sum_probs=61.1
Q ss_pred CCHHHHHHHHHHHHHCC-CCEEEEccCcccccC---------C---------C----HHHHHHHHHHHHHHhCCCcEEEE
Q 018443 73 FDLEAYDDLVNMQIVNG-AEGMIVGGTTGEGQL---------M---------S----WDEHIMLIGHTVNCFGASVKVIG 129 (356)
Q Consensus 73 ID~~~l~~~v~~li~~G-v~Gl~v~GstGE~~~---------L---------t----~eEr~~li~~~~~~~~grvpVi~ 129 (356)
+|.+.+.++++.+.+.| +++|.+.+++|.... + | ...-.+.++.+.+.+ +++|||+
T Consensus 171 ~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~-~~ipvi~ 249 (314)
T 2e6f_A 171 FDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRC-PDKLVFG 249 (314)
T ss_dssp CCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHC-TTSEEEE
T ss_pred CCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhc-CCCCEEE
Confidence 57788889999999999 999999888752111 1 1 122346777777777 6899987
Q ss_pred ecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCC
Q 018443 130 NTGSNSTREAIHATEQGFAVGMHAALHINPYYG 162 (356)
Q Consensus 130 gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~ 162 (356)
.=|=.+.+++.+.. .+|||+|++..+...
T Consensus 250 ~GGI~~~~da~~~l----~~GAd~V~ig~~~l~ 278 (314)
T 2e6f_A 250 CGGVYSGEDAFLHI----LAGASMVQVGTALQE 278 (314)
T ss_dssp ESSCCSHHHHHHHH----HHTCSSEEECHHHHH
T ss_pred ECCCCCHHHHHHHH----HcCCCEEEEchhhHh
Confidence 55545677777665 469999999887653
No 74
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=94.35 E-value=0.52 Score=45.36 Aligned_cols=122 Identities=11% Similarity=-0.010 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHCCCCEEEEccCccc----c-----------cCCCHHHHHHH----HHHHHHHhCCCcEEEE--ecC--
Q 018443 76 EAYDDLVNMQIVNGAEGMIVGGTTGE----G-----------QLMSWDEHIML----IGHTVNCFGASVKVIG--NTG-- 132 (356)
Q Consensus 76 ~~l~~~v~~li~~Gv~Gl~v~GstGE----~-----------~~Lt~eEr~~l----i~~~~~~~~grvpVi~--gvg-- 132 (356)
+.+.+-.+...++|.|||=+.+..|- | +-=|.+.|.++ ++.+.+.++.+ ||.+ ...
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~-~v~vrls~~~~ 239 (364)
T 1vyr_A 161 NDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSAD-RIGIRVSPIGT 239 (364)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGG-GEEEEECCSSC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCC-cEEEEEccccc
Confidence 45666666778899999999876541 1 11245667554 55555556545 7766 222
Q ss_pred -------CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCC-CCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHH
Q 018443 133 -------SNSTREAIHATEQGFAVGMHAALHINPYYGK-TSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHT 202 (356)
Q Consensus 133 -------~~st~~ai~lar~a~~~Gadavlv~pP~y~~-~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~ 202 (356)
..+.++++++++.+++.|+|.+-+..+.+.. +.. -..+.+.|.+. .||+.= -| ++++..++
T Consensus 240 ~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~--~~~~~~~v~~~~~iPvi~~-----Gg--it~~~a~~ 310 (364)
T 1vyr_A 240 FQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPY--SEAFRQKVRERFHGVIIGA-----GA--YTAEKAED 310 (364)
T ss_dssp BTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCC--CHHHHHHHHHHCCSEEEEE-----SS--CCHHHHHH
T ss_pred cccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcc--cHHHHHHHHHHCCCCEEEE-----CC--cCHHHHHH
Confidence 2267789999999999999999988754321 110 12355566655 465532 12 38998888
Q ss_pred HhcCC
Q 018443 203 MAQSP 207 (356)
Q Consensus 203 La~~p 207 (356)
+.+..
T Consensus 311 ~l~~g 315 (364)
T 1vyr_A 311 LIGKG 315 (364)
T ss_dssp HHHTT
T ss_pred HHHCC
Confidence 87543
No 75
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=94.31 E-value=0.3 Score=45.64 Aligned_cols=100 Identities=14% Similarity=0.111 Sum_probs=72.1
Q ss_pred HHHHHHHHCCCCEEEEccCccccc-----CCCHHHHHHHHHHHHHHhC-CCcEEEEecC---------CCCHHHHHHHHH
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGEGQ-----LMSWDEHIMLIGHTVNCFG-ASVKVIGNTG---------SNSTREAIHATE 144 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE~~-----~Lt~eEr~~li~~~~~~~~-grvpVi~gvg---------~~st~~ai~lar 144 (356)
+-++..+++|++.+-+..++.|.+ ..|.+|-.+.+..+++.+. ...+|.+.+. ..+.+..+++++
T Consensus 84 ~~i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~ 163 (298)
T 2cw6_A 84 KGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTK 163 (298)
T ss_dssp HHHHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHH
T ss_pred HhHHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHH
Confidence 347777889999999999998874 5677777777777776543 2345544332 346888999999
Q ss_pred HHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcC
Q 018443 145 QGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG 180 (356)
Q Consensus 145 ~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~~ 180 (356)
.+.++|+|.+.+.- ..+..+++++.+.++.+.+..
T Consensus 164 ~~~~~Ga~~i~l~D-T~G~~~P~~~~~lv~~l~~~~ 198 (298)
T 2cw6_A 164 KFYSMGCYEISLGD-TIGVGTPGIMKDMLSAVMQEV 198 (298)
T ss_dssp HHHHTTCSEEEEEE-TTSCCCHHHHHHHHHHHHHHS
T ss_pred HHHHcCCCEEEecC-CCCCcCHHHHHHHHHHHHHhC
Confidence 99999999877653 345567888888888887653
No 76
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=94.29 E-value=0.064 Score=51.69 Aligned_cols=95 Identities=14% Similarity=0.219 Sum_probs=62.8
Q ss_pred HHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 159 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP 159 (356)
..++.+.+.|+++|.+.|+.|-...-. .--.+++..+++.+.+++|||+.=|=.+-.++++. ..+|||+|++-.|
T Consensus 229 e~A~~a~~~GaD~I~vsn~GG~~~d~~-~~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv~ka----LalGA~aV~iGr~ 303 (352)
T 3sgz_A 229 EDAELAMKHNVQGIVVSNHGGRQLDEV-SASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKA----LALGARCIFLGRP 303 (352)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSSCSS-CCHHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHH----HHTTCSEEEESHH
T ss_pred HHHHHHHHcCCCEEEEeCCCCCccCCC-ccHHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHH----HHcCCCEEEECHH
Confidence 346677899999999988766322111 11235555666677789999986555556666543 3489999999999
Q ss_pred CCCCC---CHHHHHHHHHHHHhc
Q 018443 160 YYGKT---SLEGLISHFDSVLSM 179 (356)
Q Consensus 160 ~y~~~---s~~~l~~y~~~va~~ 179 (356)
+.+.+ .++++.++++.+.+.
T Consensus 304 ~l~~l~~~G~~gv~~~l~~l~~e 326 (352)
T 3sgz_A 304 ILWGLACKGEDGVKEVLDILTAE 326 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCcHHHHHHHHHHHHH
Confidence 76542 345666666666543
No 77
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=94.29 E-value=0.32 Score=47.16 Aligned_cols=123 Identities=11% Similarity=0.041 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHCCCCEEEEccCcc----------------cccCCCHHHHHHH----HHHHHHHhCCCcEEEEecCC--
Q 018443 76 EAYDDLVNMQIVNGAEGMIVGGTTG----------------EGQLMSWDEHIML----IGHTVNCFGASVKVIGNTGS-- 133 (356)
Q Consensus 76 ~~l~~~v~~li~~Gv~Gl~v~GstG----------------E~~~Lt~eEr~~l----i~~~~~~~~grvpVi~gvg~-- 133 (356)
+.+.+-.+...++|.|||=+.+..| |+- =|.+.|.++ ++.+.+.++.+ ||.+=++.
T Consensus 166 ~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yG-GslenR~r~~~eiv~aVr~avg~~-~v~vrls~~~ 243 (377)
T 2r14_A 166 EDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYG-GSIENRARFPLEVVDAVAEVFGPE-RVGIRLTPFL 243 (377)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTS-SSHHHHHHHHHHHHHHHHHHHCGG-GEEEEECTTC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccC-cchhhchHHHHHHHHHHHHHcCCC-cEEEEecccc
Confidence 4556666666789999999877643 222 245677554 55555566545 77665432
Q ss_pred --------CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHH
Q 018443 134 --------NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTM 203 (356)
Q Consensus 134 --------~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~L 203 (356)
.+.++++++++.+++.|+|.+-+..+.+.......-..+.+.|.+. .||+. | | .++++..+++
T Consensus 244 ~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~-~-----G-gi~~~~a~~~ 316 (377)
T 2r14_A 244 ELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLIY-C-----G-NYDAGRAQAR 316 (377)
T ss_dssp CCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCCSEEEE-E-----S-SCCHHHHHHH
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCCCCEEE-E-----C-CCCHHHHHHH
Confidence 3578899999999999999999987654211000012344555554 46654 2 2 2468888887
Q ss_pred hcCC
Q 018443 204 AQSP 207 (356)
Q Consensus 204 a~~p 207 (356)
.+..
T Consensus 317 l~~g 320 (377)
T 2r14_A 317 LDDN 320 (377)
T ss_dssp HHTT
T ss_pred HHCC
Confidence 7543
No 78
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=94.18 E-value=1.1 Score=40.10 Aligned_cols=125 Identities=15% Similarity=0.043 Sum_probs=86.9
Q ss_pred eeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCC-CcEEEEecCCCCHH
Q 018443 59 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA-SVKVIGNTGSNSTR 137 (356)
Q Consensus 59 vi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~g-rvpVi~gvg~~st~ 137 (356)
+-...++-| +.|.-..+....-++.-++.|++.|=+.-.-|..-+=.+++-.+-+..+++.+.+ -+|||.-++-.+.+
T Consensus 55 v~v~~vigF-P~G~~~~~~k~~e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e 133 (220)
T 1ub3_A 55 FRLVTVVGF-PLGYQEKEVKALEAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPE 133 (220)
T ss_dssp SEEEEEEST-TTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHH
T ss_pred ceEEEEecC-CCCCCchHHHHHHHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHH
Confidence 444445556 4566777888899999999999999776666655444566666677777776644 57889988888888
Q ss_pred HHHHHHHHHHHcCCCEEEEcCCCC-CCCCHHHHHHHHHHHHhcCCeEE
Q 018443 138 EAIHATEQGFAVGMHAALHINPYY-GKTSLEGLISHFDSVLSMGPTII 184 (356)
Q Consensus 138 ~ai~lar~a~~~Gadavlv~pP~y-~~~s~~~l~~y~~~va~~~Piil 184 (356)
+-...+|.+.++|||.|=...-|. ...+.+.+..+-+.+....||..
T Consensus 134 ~i~~a~~ia~eaGADfVKTsTGf~~~gat~~dv~~m~~~vg~~v~Vka 181 (220)
T 1ub3_A 134 EIARLAEAAIRGGADFLKTSTGFGPRGASLEDVALLVRVAQGRAQVKA 181 (220)
T ss_dssp HHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHTTSSEEEE
T ss_pred HHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHhhCCCCeEEE
Confidence 888899999999999987665443 33465555544433322244443
No 79
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=94.17 E-value=0.9 Score=43.08 Aligned_cols=123 Identities=8% Similarity=-0.044 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHCCCCEEEEccCccc---------------ccCCCHHHHH----HHHHHHHHHhCCCcEEEEecC----
Q 018443 76 EAYDDLVNMQIVNGAEGMIVGGTTGE---------------GQLMSWDEHI----MLIGHTVNCFGASVKVIGNTG---- 132 (356)
Q Consensus 76 ~~l~~~v~~li~~Gv~Gl~v~GstGE---------------~~~Lt~eEr~----~li~~~~~~~~grvpVi~gvg---- 132 (356)
+.+.+-.+...++|.|||=+.+..|- .+-=|.+.|. ++++.+.+.+ +.||.+=++
T Consensus 144 ~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v--~~pv~vris~~~~ 221 (338)
T 1z41_A 144 QEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW--DGPLFVRVSASDY 221 (338)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC--CSCEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc--CCcEEEEecCccc
Confidence 44555666677899999988876541 0112456674 4555555555 567766443
Q ss_pred ---CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCC---C-CHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHH
Q 018443 133 ---SNSTREAIHATEQGFAVGMHAALHINPYYGK---T-SLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTM 203 (356)
Q Consensus 133 ---~~st~~ai~lar~a~~~Gadavlv~pP~y~~---~-s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~L 203 (356)
+.+.++++++++.+++.|+|++-+....+.. + .+..-..+.+.|.+. .||+. .|---+++..+++
T Consensus 222 ~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~------~Ggi~s~~~a~~~ 295 (338)
T 1z41_A 222 TDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGA------VGMITDGSMAEEI 295 (338)
T ss_dssp STTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEE------CSSCCSHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEE------ECCCCCHHHHHHH
Confidence 3568899999999999999999987654321 1 111113344455444 56653 2333367777777
Q ss_pred hcC
Q 018443 204 AQS 206 (356)
Q Consensus 204 a~~ 206 (356)
.+.
T Consensus 296 l~~ 298 (338)
T 1z41_A 296 LQN 298 (338)
T ss_dssp HHT
T ss_pred HHc
Confidence 643
No 80
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=94.10 E-value=0.85 Score=42.17 Aligned_cols=173 Identities=15% Similarity=0.105 Sum_probs=98.4
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccCccc----cc------------CCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Q 018443 70 DGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGE----GQ------------LMSWDEHIMLIGHTVNCFGASVKVIGNTGS 133 (356)
Q Consensus 70 dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE----~~------------~Lt~eEr~~li~~~~~~~~grvpVi~gvg~ 133 (356)
-|.-|++...+.++.+.+.|+|.|=++=-.++ ++ -+|.+.-.++++.+.+. ..++|++.=+..
T Consensus 28 aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~-~~~~Pivlm~Y~ 106 (271)
T 3nav_A 28 IGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRAR-NPETPIGLLMYA 106 (271)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-CTTSCEEEEECH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCCEEEEecC
Confidence 57789999999999999999999865422211 11 13444445566655543 136788654333
Q ss_pred CCHHH--HHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHhc-CCCE
Q 018443 134 NSTRE--AIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMAQ-SPNL 209 (356)
Q Consensus 134 ~st~~--ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~P~~tG~~ls~~~l~~La~-~pni 209 (356)
|.... .-++++.++++|+|++++. -. ..++...+.+...+. +..+..=.|. -+.+.++++++ -+.+
T Consensus 107 n~v~~~g~~~f~~~~~~aGvdGvIip--Dl---p~ee~~~~~~~~~~~gl~~I~lvap~-----t~~eri~~i~~~~~gf 176 (271)
T 3nav_A 107 NLVYARGIDDFYQRCQKAGVDSVLIA--DV---PTNESQPFVAAAEKFGIQPIFIAPPT-----ASDETLRAVAQLGKGY 176 (271)
T ss_dssp HHHHHTCHHHHHHHHHHHTCCEEEET--TS---CGGGCHHHHHHHHHTTCEEEEEECTT-----CCHHHHHHHHHHCCSC
T ss_pred cHHHHHhHHHHHHHHHHCCCCEEEEC--CC---CHHHHHHHHHHHHHcCCeEEEEECCC-----CCHHHHHHHHHHCCCe
Confidence 32222 3568999999999999883 22 225555555555554 3333332342 24677888874 4455
Q ss_pred EEE---eecCch-----h-------hHhhhhCCCeEEEecCc----chhHhHHHHcCCceeecccc
Q 018443 210 AGV---KECVGN-----D-------RVEHYTGNGIVVWSGND----DQCHDARWNHGATGVISVTS 256 (356)
Q Consensus 210 vGi---K~s~~d-----~-------~i~~~~~~~~~v~~G~d----~~~l~~~l~~Ga~G~is~~~ 256 (356)
++. ...+|. . ++++.+ +.-+..|.. +.+ ...+..|+||+|.|++
T Consensus 177 iY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGIst~e~~-~~~~~~gADgvIVGSA 239 (271)
T 3nav_A 177 TYLLSRAGVTGAETKANMPVHALLERLQQFD--APPALLGFGISEPAQV-KQAIEAGAAGAISGSA 239 (271)
T ss_dssp EEECCCC--------CCHHHHHHHHHHHHTT--CCCEEECSSCCSHHHH-HHHHHTTCSEEEESHH
T ss_pred EEEEeccCCCCcccCCchhHHHHHHHHHHhc--CCCEEEECCCCCHHHH-HHHHHcCCCEEEECHH
Confidence 543 111111 1 233333 344554443 222 2136899999999865
No 81
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=94.07 E-value=0.1 Score=49.86 Aligned_cols=92 Identities=17% Similarity=0.225 Sum_probs=56.7
Q ss_pred HHHHHHHHCCCCEEEEccCcc------------------cccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHH
Q 018443 80 DLVNMQIVNGAEGMIVGGTTG------------------EGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIH 141 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstG------------------E~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~ 141 (356)
..++.+.+.|+++|.+.++.| ....++..+. +..+.+.+ +++|||+.=|=.+.+++.+
T Consensus 193 ~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~---l~~v~~~~-~~ipvia~GGI~~~~d~~k 268 (349)
T 1p0k_A 193 ASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAAS---LAEIRSEF-PASTMIASGGLQDALDVAK 268 (349)
T ss_dssp HHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHH---HHHHHHHC-TTSEEEEESSCCSHHHHHH
T ss_pred HHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHH---HHHHHHhc-CCCeEEEECCCCCHHHHHH
Confidence 446677788999999966544 1234555443 33444444 5799987655556666665
Q ss_pred HHHHHHHcCCCEEEEcCCCCCCC---CHHHHHHHHHHHHhc
Q 018443 142 ATEQGFAVGMHAALHINPYYGKT---SLEGLISHFDSVLSM 179 (356)
Q Consensus 142 lar~a~~~Gadavlv~pP~y~~~---s~~~l~~y~~~va~~ 179 (356)
.. .+|||+|++-.|+.+.. .++++.++++.+.+.
T Consensus 269 ~l----~~GAd~V~iG~~~l~~~~~~g~~~~~~~~~~~~~~ 305 (349)
T 1p0k_A 269 AI----ALGASCTGMAGHFLKALTDSGEEGLLEEIQLILEE 305 (349)
T ss_dssp HH----HTTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HH----HcCCCEEEEcHHHHHHHhhcCHHHHHHHHHHHHHH
Confidence 43 36999999999876542 334455555555443
No 82
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=94.04 E-value=1.4 Score=38.19 Aligned_cols=156 Identities=12% Similarity=0.015 Sum_probs=86.5
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCC
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMH 152 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gad 152 (356)
.|.+...++++.+.+.|++.+-+.-.+.+ -.+.++.+.+..+.+.++-+|+. .+.+ .++.|.+.|+|
T Consensus 19 ~~~~~~~~~~~~~~~~G~~~iev~~~~~~--------~~~~i~~ir~~~~~~~~ig~~~v-~~~~----~~~~a~~~Gad 85 (205)
T 1wa3_A 19 NSVEEAKEKALAVFEGGVHLIEITFTVPD--------ADTVIKELSFLKEKGAIIGAGTV-TSVE----QCRKAVESGAE 85 (205)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEETTSTT--------HHHHHHHTHHHHHTTCEEEEESC-CSHH----HHHHHHHHTCS
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCChh--------HHHHHHHHHHHCCCCcEEEeccc-CCHH----HHHHHHHcCCC
Confidence 36778999999999999999966544321 13456666665543444434332 3343 46778889999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHHHhcCCCEEEEeecCch----hhHhhhhC--
Q 018443 153 AALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKECVGN----DRVEHYTG-- 226 (356)
Q Consensus 153 avlv~pP~y~~~s~~~l~~y~~~va~~~PiilYn~P~~tG~~ls~~~l~~La~~pnivGiK~s~~d----~~i~~~~~-- 226 (356)
.+ +. |.+. .+++++.++ ...|++. |. .+++.+.+..+. ++-.+|....+ ..+.++..
T Consensus 86 ~i-v~-~~~~----~~~~~~~~~--~g~~vi~-------g~-~t~~e~~~a~~~-Gad~vk~~~~~~~g~~~~~~l~~~~ 148 (205)
T 1wa3_A 86 FI-VS-PHLD----EEISQFCKE--KGVFYMP-------GV-MTPTELVKAMKL-GHTILKLFPGEVVGPQFVKAMKGPF 148 (205)
T ss_dssp EE-EC-SSCC----HHHHHHHHH--HTCEEEC-------EE-CSHHHHHHHHHT-TCCEEEETTHHHHHHHHHHHHHTTC
T ss_pred EE-Ec-CCCC----HHHHHHHHH--cCCcEEC-------Cc-CCHHHHHHHHHc-CCCEEEEcCccccCHHHHHHHHHhC
Confidence 99 44 5542 445554443 1257653 22 355555554443 23345643322 12222221
Q ss_pred CCeEEE--ecCcchhHhHHHHcCCceeecccccc
Q 018443 227 NGIVVW--SGNDDQCHDARWNHGATGVISVTSNL 258 (356)
Q Consensus 227 ~~~~v~--~G~d~~~l~~~l~~Ga~G~is~~~n~ 258 (356)
+++.++ .|-...-....+..|++|+..|++.+
T Consensus 149 ~~~pvia~GGI~~~~~~~~~~~Ga~~v~vGs~i~ 182 (205)
T 1wa3_A 149 PNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALV 182 (205)
T ss_dssp TTCEEEEBSSCCTTTHHHHHHHTCSCEEECHHHH
T ss_pred CCCcEEEcCCCCHHHHHHHHHCCCCEEEECcccc
Confidence 144443 34432233445789999998886543
No 83
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=93.86 E-value=0.14 Score=47.62 Aligned_cols=127 Identities=14% Similarity=0.116 Sum_probs=82.0
Q ss_pred EeeecccCCCCCCCHHHHHHHHHHHHH-CCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCC-----
Q 018443 61 TAIKTPYLPDGRFDLEAYDDLVNMQIV-NGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN----- 134 (356)
Q Consensus 61 ~al~TPf~~dg~ID~~~l~~~v~~li~-~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~----- 134 (356)
...=|||-. -..+.+...+++.++++ .|++++-+=|. +|..+.++.+++ .++||++++|-+
T Consensus 98 vvaD~pfgs-y~~s~~~a~~na~rl~~eaGa~aVklEdg---------~e~~~~I~al~~---agIpV~gHiGLtPqsv~ 164 (281)
T 1oy0_A 98 VVADLPFGS-YEAGPTAALAAATRFLKDGGAHAVKLEGG---------ERVAEQIACLTA---AGIPVMAHIGFTPQSVN 164 (281)
T ss_dssp EEEECCTTS-STTCHHHHHHHHHHHHHTTCCSEEEEEBS---------GGGHHHHHHHHH---HTCCEEEEEECCC----
T ss_pred EEEECCCCc-ccCCHHHHHHHHHHHHHHhCCeEEEECCc---------HHHHHHHHHHHH---CCCCEEeeecCCcceec
Confidence 336788852 23466666566666665 99999988675 255555665554 368888554322
Q ss_pred ------------CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeC-CCCCCCCCCHHH
Q 018443 135 ------------STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNV-PSRTGQDIPPRV 199 (356)
Q Consensus 135 ------------st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~-P~~tG~~ls~~~ 199 (356)
..+++++.++..+++|||++++-.. .. ++ .++|.++ +|+|-.-. |...|..|=...
T Consensus 165 ~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~v-----p~-~~---a~~it~~l~iP~igIGaG~~~dgQvLV~~D 235 (281)
T 1oy0_A 165 TLGGFRVQGRGDAAEQTIADAIAVAEAGAFAVVMEMV-----PA-EL---ATQITGKLTIPTVGIGAGPNCDGQVLVWQD 235 (281)
T ss_dssp ----------CHHHHHHHHHHHHHHHHTCSEEEEESC-----CH-HH---HHHHHHHCSSCEEEESSCSCSSEEEECHHH
T ss_pred ccCCeEEEeCcHHHHHHHHHHHHHHHcCCcEEEEecC-----CH-HH---HHHHHHhCCCCEEEeCCCCCCCcceeeHhh
Confidence 2478999999999999999988652 22 33 3577776 68887654 555566665554
Q ss_pred HHHHh-c-CCCE
Q 018443 200 IHTMA-Q-SPNL 209 (356)
Q Consensus 200 l~~La-~-~pni 209 (356)
+.-|. + .|.+
T Consensus 236 ~lG~~~~~~pkf 247 (281)
T 1oy0_A 236 MAGFSGAKTARF 247 (281)
T ss_dssp HTTCSCSCCCTT
T ss_pred hcCCCCCCCCCc
Confidence 44444 2 3655
No 84
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=93.66 E-value=0.58 Score=44.96 Aligned_cols=127 Identities=13% Similarity=0.010 Sum_probs=75.1
Q ss_pred CCCHHHHHHHHHH-------HHHCCCCEEEEccCcc----------------cccCCCHHHHHHHHHHH----HHHhCCC
Q 018443 72 RFDLEAYDDLVNM-------QIVNGAEGMIVGGTTG----------------EGQLMSWDEHIMLIGHT----VNCFGAS 124 (356)
Q Consensus 72 ~ID~~~l~~~v~~-------li~~Gv~Gl~v~GstG----------------E~~~Lt~eEr~~li~~~----~~~~~gr 124 (356)
.++.+.+++.++. ..++|.|||=+.+..| |+- =|.+.|.+++..+ .+.++.+
T Consensus 147 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yG-GslenR~r~~~eiv~aVr~avg~d 225 (363)
T 3l5l_A 147 EMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYG-GSFDNRSRFLLETLAAVREVWPEN 225 (363)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTS-SSHHHHHHHHHHHHHHHHTTSCTT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccC-cCHHHHHHHHHHHHHHHHHHcCCC
Confidence 3566666665554 4568999998887643 221 2567776554444 4445556
Q ss_pred cEEEEecCC--------CCHHHHHHHHHHHHHcCCCEEEEcCCCCCC----C-CHHHHHHHHHHHHhc--CCeEEEeCCC
Q 018443 125 VKVIGNTGS--------NSTREAIHATEQGFAVGMHAALHINPYYGK----T-SLEGLISHFDSVLSM--GPTIIYNVPS 189 (356)
Q Consensus 125 vpVi~gvg~--------~st~~ai~lar~a~~~Gadavlv~pP~y~~----~-s~~~l~~y~~~va~~--~PiilYn~P~ 189 (356)
.||.+=++. .+.++++++++..++.|+|.+-+....+.. + .+..-..+.+.|.+. .||+.
T Consensus 226 ~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~----- 300 (363)
T 3l5l_A 226 LPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTS----- 300 (363)
T ss_dssp SCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEE-----
T ss_pred ceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEE-----
Confidence 677664332 467899999999999999999887543211 0 111112334444443 56653
Q ss_pred CCCCCCCHHHHHHHhc
Q 018443 190 RTGQDIPPRVIHTMAQ 205 (356)
Q Consensus 190 ~tG~~ls~~~l~~La~ 205 (356)
.|---+++..+++.+
T Consensus 301 -~GgI~s~e~a~~~l~ 315 (363)
T 3l5l_A 301 -AWGFGTPQLAEAALQ 315 (363)
T ss_dssp -CSSTTSHHHHHHHHH
T ss_pred -eCCCCCHHHHHHHHH
Confidence 233336777776654
No 85
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=93.59 E-value=0.5 Score=44.11 Aligned_cols=103 Identities=14% Similarity=-0.031 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHCCCCEEEEccCccccc-----CCCHHHHHHHHHHHHHHhCC-CcEEEEec---CCCCHHHHHHHHHHHH
Q 018443 77 AYDDLVNMQIVNGAEGMIVGGTTGEGQ-----LMSWDEHIMLIGHTVNCFGA-SVKVIGNT---GSNSTREAIHATEQGF 147 (356)
Q Consensus 77 ~l~~~v~~li~~Gv~Gl~v~GstGE~~-----~Lt~eEr~~li~~~~~~~~g-rvpVi~gv---g~~st~~ai~lar~a~ 147 (356)
.+++.++.+.+.|++-+-+..+++|.+ ..|.+|-.+.++.+++.+.. ...|..+. +..+.+..++.++.+.
T Consensus 81 di~~a~~~~~~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~~~~~~~~~~~~~~~ 160 (293)
T 3ewb_X 81 DIDRAEEALKDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTAI 160 (293)
T ss_dssp HHHHHHHHHTTCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCCCCHHHHHHHHHHHH
Confidence 345555555566777777777777765 56777766666666654422 23344433 2245666667777777
Q ss_pred HcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcC
Q 018443 148 AVGMHAALHINPYYGKTSLEGLISHFDSVLSMG 180 (356)
Q Consensus 148 ~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~~ 180 (356)
++|+|.+.+. =..+..+++++.+.++.+.+..
T Consensus 161 ~~G~~~i~l~-DT~G~~~P~~v~~lv~~l~~~~ 192 (293)
T 3ewb_X 161 DAGATVINIP-DTVGYTNPTEFGQLFQDLRREI 192 (293)
T ss_dssp HTTCCEEEEE-CSSSCCCHHHHHHHHHHHHHHC
T ss_pred HcCCCEEEec-CCCCCCCHHHHHHHHHHHHHhc
Confidence 7777655443 2344456666666666665543
No 86
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=93.51 E-value=0.54 Score=43.35 Aligned_cols=130 Identities=14% Similarity=0.150 Sum_probs=82.6
Q ss_pred HHHHHHHHHHCCCCEEEEccCcc-cccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEE
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTG-EGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALH 156 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstG-E~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv 156 (356)
.+.+++.+-+.||+..++.+... +...-+.+ .+++. ++...+|+--++|+--...+++++..+++.+.|+.||-+
T Consensus 49 ~e~~l~~md~~GV~~~V~~~~~~~~~~~~~N~---~~~~~-~~~~p~r~~~~~~v~p~~~~~a~~eL~~~~~~g~~Gi~~ 124 (291)
T 3irs_A 49 LELMFEEMAAAGIEQGVCVGRNSSVLGSVSNA---DVAAV-AKAYPDKFHPVGSIEAATRKEAMAQMQEILDLGIRIVNL 124 (291)
T ss_dssp HHHHHHHHHHTTCCEEEEECCEETTTEECCHH---HHHHH-HHHSTTTEEEEEECCCSSHHHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHCCCCEEEEcCCCccccccccHH---HHHHH-HHHCCCcEEEEEecCccCHHHHHHHHHHHHhCCCeEEEE
Confidence 45566777789999988887664 21112222 34433 344566776677776555677777777788999999988
Q ss_pred cCCCC---CCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCC--C-CHHHHHHHh-cCCCEEEE
Q 018443 157 INPYY---GKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQD--I-PPRVIHTMA-QSPNLAGV 212 (356)
Q Consensus 157 ~pP~y---~~~s~~~l~~y~~~va~~-~PiilYn~P~~tG~~--l-s~~~l~~La-~~pnivGi 212 (356)
.+-++ ...+++.+...|+...+. +||+++--.. .|.. . .+..+.+++ ++|++..+
T Consensus 125 ~~~~~~~~~~~~d~~~~~~~~~a~e~glpv~iH~~~~-~~~~~~~~~p~~~~~v~~~~P~l~iv 187 (291)
T 3irs_A 125 EPGVWATPMHVDDRRLYPLYAFCEDNGIPVIMMTGGN-AGPDITYTNPEHIDRVLGDFPDLTVV 187 (291)
T ss_dssp CGGGSSSCCCTTCGGGHHHHHHHHHTTCCEEEECSSS-CSSSGGGGCHHHHHHHHHHCTTCCEE
T ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHcCCeEEEeCCCC-CCCCCccCCHHHHHHHHHHCCCCEEE
Confidence 74332 124567788888888776 7999986432 1111 1 245566666 68876544
No 87
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=93.50 E-value=0.49 Score=44.47 Aligned_cols=100 Identities=12% Similarity=0.012 Sum_probs=68.6
Q ss_pred HHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHh-CCCcEEEEecC-------C-CCH-HHHHHHHHHHHHc
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCF-GASVKVIGNTG-------S-NST-REAIHATEQGFAV 149 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~-~grvpVi~gvg-------~-~st-~~ai~lar~a~~~ 149 (356)
.-++..++.|++++-+++..| .-.+..|+.+.++.+++.+ .-.+|+++-+. . .+. +...+.++.+.++
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~~--~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~l 189 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLWR--SDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDS 189 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEEC--TTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTS
T ss_pred hhHHHHHHcCCCEEEEEEEcC--CCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHc
Confidence 456777889999998777666 2234577777787777764 44788776542 1 223 4445559999999
Q ss_pred CCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CC
Q 018443 150 GMHAALHINPYYGKTSLEGLISHFDSVLSM--GP 181 (356)
Q Consensus 150 Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~P 181 (356)
|+|.+=+-+|.+...+.+++.+..+...+. .|
T Consensus 190 GaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P 223 (304)
T 1to3_A 190 GADLYKVEMPLYGKGARSDLLTASQRLNGHINMP 223 (304)
T ss_dssp SCSEEEECCGGGGCSCHHHHHHHHHHHHHTCCSC
T ss_pred CCCEEEeCCCcCCCCCHHHHHHHHHhccccCCCC
Confidence 999888877765334677777777776654 46
No 88
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=93.42 E-value=1.1 Score=46.23 Aligned_cols=125 Identities=11% Similarity=0.065 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHCCCCEEEEccCccc----c-----------cCCCHHHH----HHHHHHHHHHhCCCcEEEEec-----
Q 018443 76 EAYDDLVNMQIVNGAEGMIVGGTTGE----G-----------QLMSWDEH----IMLIGHTVNCFGASVKVIGNT----- 131 (356)
Q Consensus 76 ~~l~~~v~~li~~Gv~Gl~v~GstGE----~-----------~~Lt~eEr----~~li~~~~~~~~grvpVi~gv----- 131 (356)
+.+.+-.+...++|.|||=+.+..|- | +-=|.+.| .++++.+.+.++.+.||.+=+
T Consensus 141 ~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~ 220 (671)
T 1ps9_A 141 DNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDL 220 (671)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECcccc
Confidence 34555556667899999988776542 1 11245667 556666666777777876622
Q ss_pred --CCCCHHHHHHHHHHHHHcCCCEEEEcC----CCC---CCCC-HHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHH
Q 018443 132 --GSNSTREAIHATEQGFAVGMHAALHIN----PYY---GKTS-LEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRV 199 (356)
Q Consensus 132 --g~~st~~ai~lar~a~~~Gadavlv~p----P~y---~~~s-~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~ 199 (356)
++.+.++++++++.+++.|+|.+-+.. |.+ .... ......+.+.+.+. .||+. .|--.+++.
T Consensus 221 ~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~------~Ggi~~~~~ 294 (671)
T 1ps9_A 221 VEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVT------TNRINDPQV 294 (671)
T ss_dssp STTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEE------CSSCCSHHH
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEE------eCCCCCHHH
Confidence 245789999999999999999997741 111 1111 11224566667665 57764 243347888
Q ss_pred HHHHhcC
Q 018443 200 IHTMAQS 206 (356)
Q Consensus 200 l~~La~~ 206 (356)
.+++.+.
T Consensus 295 a~~~l~~ 301 (671)
T 1ps9_A 295 ADDILSR 301 (671)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 8887754
No 89
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=93.41 E-value=1.3 Score=40.89 Aligned_cols=179 Identities=13% Similarity=0.026 Sum_probs=103.0
Q ss_pred CceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccc----------------cCCCHHHHHHHHHHHHHH
Q 018443 57 LRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEG----------------QLMSWDEHIMLIGHTVNC 120 (356)
Q Consensus 57 ~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~----------------~~Lt~eEr~~li~~~~~~ 120 (356)
++.+.+.+|| |.-|++...+.++.+.+. +|.|-+....++- .-+|.+.-.++++.+.+.
T Consensus 15 ~~~li~~i~~----GdP~~~~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~ 89 (271)
T 1ujp_A 15 RAALIPYLTA----GFPSREGFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRAL 89 (271)
T ss_dssp BCEEEEEEET----TSSCHHHHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CceEEEEecC----CCCChHHHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc
Confidence 3455555666 456778888899999888 9999886554421 114555556677777665
Q ss_pred hCCCcEEEEecCCCCHH--HHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCH
Q 018443 121 FGASVKVIGNTGSNSTR--EAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPP 197 (356)
Q Consensus 121 ~~grvpVi~gvg~~st~--~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~P~~tG~~ls~ 197 (356)
-++|+++=...+... ..-++++.+.++|+|++++.. . +.+++..|.+.+.+. .+.+..=.| .-+.
T Consensus 90 --~~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~D--l---~~ee~~~~~~~~~~~gl~~i~liap-----~s~~ 157 (271)
T 1ujp_A 90 --TEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPD--L---PPDEDPGLVRLAQEIGLETVFLLAP-----TSTD 157 (271)
T ss_dssp --CCSCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECTT--C---CGGGCHHHHHHHHHHTCEEECEECT-----TCCH
T ss_pred --CCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEecC--C---CHHHHHHHHHHHHHcCCceEEEeCC-----CCCH
Confidence 357887632222111 235678889999999988742 1 226677777766655 443332233 2456
Q ss_pred HHHHHHhc-CCCEEEEe---------ecCch--h----hHhhhhCCCeEEEecCc---chhHhHHHHcCCceeecccc
Q 018443 198 RVIHTMAQ-SPNLAGVK---------ECVGN--D----RVEHYTGNGIVVWSGND---DQCHDARWNHGATGVISVTS 256 (356)
Q Consensus 198 ~~l~~La~-~pnivGiK---------~s~~d--~----~i~~~~~~~~~v~~G~d---~~~l~~~l~~Ga~G~is~~~ 256 (356)
+-++++++ -..++.+= ..... . ++++.. +..|+.|.. ..-... + .|+||+|.|++
T Consensus 158 eri~~ia~~~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGI~t~e~a~~-~-~~ADgVIVGSA 231 (271)
T 1ujp_A 158 ARIATVVRHATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKART--ALPVAVGFGVSGKATAAQ-A-AVADGVVVGSA 231 (271)
T ss_dssp HHHHHHHTTCCSCEEEECC------------CCHHHHHHHHTTC--CSCEEEESCCCSHHHHHH-H-TTSSEEEECHH
T ss_pred HHHHHHHHhCCCCEEEEecCcccCCCCCCCccHHHHHHHHHhhc--CCCEEEEcCCCCHHHHHH-h-cCCCEEEEChH
Confidence 77888874 34444221 11111 1 223322 445555442 112233 5 89999998865
No 90
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=93.32 E-value=0.47 Score=44.63 Aligned_cols=99 Identities=12% Similarity=0.054 Sum_probs=58.0
Q ss_pred HHHHHHHCCCCEEEEccCcccc-----cCCCHHHHHHHHHHHHHHhCC-CcEEEEec---------CCCCHHHHHHHHHH
Q 018443 81 LVNMQIVNGAEGMIVGGTTGEG-----QLMSWDEHIMLIGHTVNCFGA-SVKVIGNT---------GSNSTREAIHATEQ 145 (356)
Q Consensus 81 ~v~~li~~Gv~Gl~v~GstGE~-----~~Lt~eEr~~li~~~~~~~~g-rvpVi~gv---------g~~st~~ai~lar~ 145 (356)
-++..+++|++.+-+..++.|. ...|.+|-.+.++.+++.+.. ...|-+.+ +..+.+..++.++.
T Consensus 86 ~i~~a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~ 165 (307)
T 1ydo_A 86 GLENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEA 165 (307)
T ss_dssp HHHHHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHH
T ss_pred hHHHHHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHH
Confidence 3666667788888888888875 345666666666555554321 23332221 11356666777777
Q ss_pred HHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcC
Q 018443 146 GFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG 180 (356)
Q Consensus 146 a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~~ 180 (356)
+.++|+|.+.+.. ..+..+++++.+.++.+.+..
T Consensus 166 ~~~~Ga~~i~l~D-T~G~~~P~~v~~lv~~l~~~~ 199 (307)
T 1ydo_A 166 LFEFGISELSLGD-TIGAANPAQVETVLEALLARF 199 (307)
T ss_dssp HHHHTCSCEEEEC-SSCCCCHHHHHHHHHHHHTTS
T ss_pred HHhcCCCEEEEcC-CCCCcCHHHHHHHHHHHHHhC
Confidence 7777776655442 344456666666666665543
No 91
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=93.23 E-value=0.35 Score=46.13 Aligned_cols=101 Identities=11% Similarity=0.028 Sum_probs=81.5
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcC
Q 018443 71 GRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVG 150 (356)
Q Consensus 71 g~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~G 150 (356)
.+.|.+.+.++++.+.+.|++-|.+.+|+|-. ++++-.++++.+.+.+++++|+-++. +++.--++.-+..|.++|
T Consensus 144 ~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~---~P~~v~~lv~~l~~~~~~~~pi~~H~-Hn~~G~avAn~laA~~aG 219 (345)
T 1nvm_A 144 HMIPAEKLAEQGKLMESYGATCIYMADSGGAM---SMNDIRDRMRAFKAVLKPETQVGMHA-HHNLSLGVANSIVAVEEG 219 (345)
T ss_dssp TSSCHHHHHHHHHHHHHHTCSEEEEECTTCCC---CHHHHHHHHHHHHHHSCTTSEEEEEC-BCTTSCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCcCcc---CHHHHHHHHHHHHHhcCCCceEEEEE-CCCccHHHHHHHHHHHcC
Confidence 46789999999999999999999999999985 69999999999999886567877765 567778889999999999
Q ss_pred CCEEEEcCCCCC----CCCHHHHHHHHHH
Q 018443 151 MHAALHINPYYG----KTSLEGLISHFDS 175 (356)
Q Consensus 151 adavlv~pP~y~----~~s~~~l~~y~~~ 175 (356)
|+.+=..---+. .++-++++..++.
T Consensus 220 a~~vd~tv~GlG~~aGN~~le~lv~~L~~ 248 (345)
T 1nvm_A 220 CDRVDASLAGMGAGAGNAPLEVFIAVAER 248 (345)
T ss_dssp CCEEEEBGGGCSSTTCBCBHHHHHHHHHH
T ss_pred CCEEEecchhccCCccCcCHHHHHHHHHh
Confidence 999866543332 3555666666653
No 92
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=93.20 E-value=0.88 Score=45.66 Aligned_cols=95 Identities=9% Similarity=0.065 Sum_probs=63.0
Q ss_pred HHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEe-cCCCCHHHHHHHHHHHHHcCCCEEEE
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGN-TGSNSTREAIHATEQGFAVGMHAALH 156 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~g-vg~~st~~ai~lar~a~~~Gadavlv 156 (356)
..+.++.+++.|++++.+..+.|.- +.-.++++.+.+.+ +++||++| +. +.+.++.+.++|+|++.+
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G~~-----~~~~~~i~~i~~~~-~~~pvi~~~v~------t~~~a~~l~~aGad~I~v 323 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQGNS-----VYQIAMVHYIKQKY-PHLQVIGGNVV------TAAQAKNLIDAGVDGLRV 323 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCCS-----HHHHHHHHHHHHHC-TTCEEEEEEEC------SHHHHHHHHHHTCSEEEE
T ss_pred hHHHHHHHHHcCCCEEEeeccCCcc-----hhHHHHHHHHHHhC-CCCceEecccc------hHHHHHHHHHcCCCEEEE
Confidence 4567777889999999987776632 33457788787777 47899984 52 245688899999999988
Q ss_pred cC-CCC---------CCCCHHHHHHHHHHHHhc--CCeEE
Q 018443 157 IN-PYY---------GKTSLEGLISHFDSVLSM--GPTII 184 (356)
Q Consensus 157 ~p-P~y---------~~~s~~~l~~y~~~va~~--~Piil 184 (356)
.. |-. ....+...+....++++. .|||.
T Consensus 324 g~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia 363 (514)
T 1jcn_A 324 GMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIA 363 (514)
T ss_dssp CSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEE
T ss_pred CCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEE
Confidence 43 211 111244455666666664 56653
No 93
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=93.12 E-value=2.1 Score=38.59 Aligned_cols=186 Identities=14% Similarity=0.057 Sum_probs=107.1
Q ss_pred cCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCC
Q 018443 56 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 135 (356)
Q Consensus 56 ~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~s 135 (356)
..|+++.+.. .|.+....+++.+++.|++.+=+.-.| .+-.+.++.+.+..+ + +++|.|..-
T Consensus 33 ~~~vv~Vir~-------~~~~~a~~~a~al~~gGi~~iEvt~~t--------~~a~e~I~~l~~~~~-~--~~iGaGTVl 94 (232)
T 4e38_A 33 ALKVIPVIAI-------DNAEDIIPLGKVLAENGLPAAEITFRS--------DAAVEAIRLLRQAQP-E--MLIGAGTIL 94 (232)
T ss_dssp HHCEEEEECC-------SSGGGHHHHHHHHHHTTCCEEEEETTS--------TTHHHHHHHHHHHCT-T--CEEEEECCC
T ss_pred hCCEEEEEEc-------CCHHHHHHHHHHHHHCCCCEEEEeCCC--------CCHHHHHHHHHHhCC-C--CEEeECCcC
Confidence 3467766532 344678899999999999999764333 234567776777664 3 355655443
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHHHhcC-CCEEEEee
Q 018443 136 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHTMAQS-PNLAGVKE 214 (356)
Q Consensus 136 t~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~~PiilYn~P~~tG~~ls~~~l~~La~~-pnivGiK~ 214 (356)
+.+.++.|.++|||.++. |. ...++.++.++. ..|++ .|+ .+++.+.+-.+. ..++ |.
T Consensus 95 ---t~~~a~~Ai~AGA~fIvs--P~----~~~~vi~~~~~~--gi~~i-------pGv-~TptEi~~A~~~Gad~v--K~ 153 (232)
T 4e38_A 95 ---NGEQALAAKEAGATFVVS--PG----FNPNTVRACQEI--GIDIV-------PGV-NNPSTVEAALEMGLTTL--KF 153 (232)
T ss_dssp ---SHHHHHHHHHHTCSEEEC--SS----CCHHHHHHHHHH--TCEEE-------CEE-CSHHHHHHHHHTTCCEE--EE
T ss_pred ---CHHHHHHHHHcCCCEEEe--CC----CCHHHHHHHHHc--CCCEE-------cCC-CCHHHHHHHHHcCCCEE--EE
Confidence 377788899999999974 43 245666664442 23333 244 367665554443 3444 43
Q ss_pred cCch-----hhHhhhhC--CCeEEE--ecCcchhHhHHHHcCCceeecccccccHHHHHHHHHcCCcHHHHHHHHHHHH
Q 018443 215 CVGN-----DRVEHYTG--NGIVVW--SGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMFGGKNPSLNTKLFPLIE 284 (356)
Q Consensus 215 s~~d-----~~i~~~~~--~~~~v~--~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~ag~a~~l~~~l~~l~~ 284 (356)
.-.. ..++++.. +++.++ .|-+..-+..++..|+.+++.|+ ++.|+. +.++|+..++.++...+.+
T Consensus 154 FPa~~~gG~~~lkal~~p~p~ip~~ptGGI~~~n~~~~l~aGa~~~vgGs-~l~~~~---~i~~~~~~~i~~~a~~~~~ 228 (232)
T 4e38_A 154 FPAEASGGISMVKSLVGPYGDIRLMPTGGITPSNIDNYLAIPQVLACGGT-WMVDKK---LVTNGEWDEIARLTREIVE 228 (232)
T ss_dssp CSTTTTTHHHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHTSTTBCCEEEC-GGGCHH---HHHTTCHHHHHHHHHHHHH
T ss_pred CcCccccCHHHHHHHHHHhcCCCeeeEcCCCHHHHHHHHHCCCeEEEECc-hhcChH---HhhcCCHHHHHHHHHHHHH
Confidence 2211 23444332 345544 35443334566888999877654 455432 3466665555555444443
No 94
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=93.09 E-value=1.3 Score=42.48 Aligned_cols=120 Identities=12% Similarity=0.038 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHCCCCEEEEccCcc----------------cccCCCHHHHHHH----HHHHHHHhCCCcEEEEecC---
Q 018443 76 EAYDDLVNMQIVNGAEGMIVGGTTG----------------EGQLMSWDEHIML----IGHTVNCFGASVKVIGNTG--- 132 (356)
Q Consensus 76 ~~l~~~v~~li~~Gv~Gl~v~GstG----------------E~~~Lt~eEr~~l----i~~~~~~~~grvpVi~gvg--- 132 (356)
+.+.+-.+...++|.|||=+.+..| |+ -=|.+.|.++ ++.+.+.++.+ ||.+=++
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~y-GGslenr~r~~~eiv~avr~~vg~~-pv~vris~~~ 238 (365)
T 2gou_A 161 ADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEY-GGSLENRLRFLDEVVAALVDAIGAE-RVGVRLAPLT 238 (365)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTT-SSSHHHHTHHHHHHHHHHHHHHCGG-GEEEEECSSC
T ss_pred HHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCccc-CcchhhhHHHHHHHHHHHHHHcCCC-cEEEEEcccc
Confidence 3445555556789999999987653 21 1245666444 55555566545 7776222
Q ss_pred -------CCCHHHHHHHHHHHHHcCCCEEEEcCCCCC-CCC-HHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHH
Q 018443 133 -------SNSTREAIHATEQGFAVGMHAALHINPYYG-KTS-LEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIH 201 (356)
Q Consensus 133 -------~~st~~ai~lar~a~~~Gadavlv~pP~y~-~~s-~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~ 201 (356)
..+.++++++++.+++.|+|++-+..+.+. .+. +. .+.+.|.+. .||+.= -| ++++...
T Consensus 239 ~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~---~~~~~i~~~~~iPvi~~-----Gg--i~~~~a~ 308 (365)
T 2gou_A 239 TLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPV---SFKRALREAYQGVLIYA-----GR--YNAEKAE 308 (365)
T ss_dssp CTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCH---HHHHHHHHHCCSEEEEE-----SS--CCHHHHH
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccH---HHHHHHHHHCCCcEEEe-----CC--CCHHHHH
Confidence 236788999999999999999999876442 111 11 344555554 465532 13 3888888
Q ss_pred HHhcCC
Q 018443 202 TMAQSP 207 (356)
Q Consensus 202 ~La~~p 207 (356)
++.+..
T Consensus 309 ~~l~~g 314 (365)
T 2gou_A 309 QAINDG 314 (365)
T ss_dssp HHHHTT
T ss_pred HHHHCC
Confidence 877543
No 95
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=93.01 E-value=1.3 Score=42.13 Aligned_cols=125 Identities=8% Similarity=-0.039 Sum_probs=75.3
Q ss_pred CCHHHHHHHHH-------HHHHCCCCEEEEccCc----------------ccccCCCHHHHHH----HHHHHHHHhCCCc
Q 018443 73 FDLEAYDDLVN-------MQIVNGAEGMIVGGTT----------------GEGQLMSWDEHIM----LIGHTVNCFGASV 125 (356)
Q Consensus 73 ID~~~l~~~v~-------~li~~Gv~Gl~v~Gst----------------GE~~~Lt~eEr~~----li~~~~~~~~grv 125 (356)
++.+.+++.++ ...++|.|||=+.+.. .|+- =|.+.|.+ +++.+.+.+ +.
T Consensus 134 mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yG-GslenR~r~~~eiv~avr~~v--~~ 210 (340)
T 3gr7_A 134 MTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYG-GSPENRYRFLGEVIDAVREVW--DG 210 (340)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTS-SSHHHHHHHHHHHHHHHHHHC--CS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCccc-CCHHHHHHHHHHHHHHHHHhc--CC
Confidence 55555555554 4556899999888774 2322 36777754 444555555 55
Q ss_pred EEEEecC-------CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCC----CHHHHHHHHHHHHhc--CCeEEEeCCCCCC
Q 018443 126 KVIGNTG-------SNSTREAIHATEQGFAVGMHAALHINPYYGKT----SLEGLISHFDSVLSM--GPTIIYNVPSRTG 192 (356)
Q Consensus 126 pVi~gvg-------~~st~~ai~lar~a~~~Gadavlv~pP~y~~~----s~~~l~~y~~~va~~--~PiilYn~P~~tG 192 (356)
||.+=++ +.+.++++++++..+++|+|.+-+....+... .+..-..+.+.|.+. +||+.= |
T Consensus 211 pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~------G 284 (340)
T 3gr7_A 211 PLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAV------G 284 (340)
T ss_dssp CEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEE------S
T ss_pred ceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEee------C
Confidence 7765443 34688999999999999999998875432210 111123344555554 566542 3
Q ss_pred CCCCHHHHHHHhcC
Q 018443 193 QDIPPRVIHTMAQS 206 (356)
Q Consensus 193 ~~ls~~~l~~La~~ 206 (356)
---+++..+++.+.
T Consensus 285 gI~s~e~a~~~L~~ 298 (340)
T 3gr7_A 285 LITSGWQAEEILQN 298 (340)
T ss_dssp SCCCHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHC
Confidence 33467777776643
No 96
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=92.98 E-value=0.33 Score=44.64 Aligned_cols=90 Identities=11% Similarity=0.073 Sum_probs=62.2
Q ss_pred HHHHHHHHCCCCEEEEccC-cccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC
Q 018443 80 DLVNMQIVNGAEGMIVGGT-TGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN 158 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~Gs-tGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~p 158 (356)
.+.+++.+.|++.+...|+ .|-+..++. .++++.+++. .++|||+.-|=.+.++ +..|.++|+|+|++-.
T Consensus 147 ~~akrl~~~G~~aVmPlg~pIGsG~Gi~~---~~lI~~I~e~--~~vPVI~eGGI~TPsD----Aa~AmeLGAdgVlVgS 217 (265)
T 1wv2_A 147 IIARQLAEIGCIAVMPLAGLIGSGLGICN---PYNLRIILEE--AKVPVLVDAGVGTASD----AAIAMELGCEAVLMNT 217 (265)
T ss_dssp HHHHHHHHSCCSEEEECSSSTTCCCCCSC---HHHHHHHHHH--CSSCBEEESCCCSHHH----HHHHHHHTCSEEEESH
T ss_pred HHHHHHHHhCCCEEEeCCccCCCCCCcCC---HHHHHHHHhc--CCCCEEEeCCCCCHHH----HHHHHHcCCCEEEECh
Confidence 3456677889999998775 455655654 4556666663 4799999666555554 4567788999999987
Q ss_pred CCCCCCCHHHHHHHHHHHHh
Q 018443 159 PYYGKTSLEGLISHFDSVLS 178 (356)
Q Consensus 159 P~y~~~s~~~l~~y~~~va~ 178 (356)
-.....++..+.+.|..-.+
T Consensus 218 AI~~a~dP~~ma~af~~Av~ 237 (265)
T 1wv2_A 218 AIAHAKDPVMMAEAMKHAIV 237 (265)
T ss_dssp HHHTSSSHHHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHH
Confidence 66655566776666666443
No 97
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=92.95 E-value=3.9 Score=38.37 Aligned_cols=111 Identities=12% Similarity=0.130 Sum_probs=71.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCc-----cccc----CCCHHHHHHHHHHHHHHhCCCcEEEEec------CCCCHH
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTT-----GEGQ----LMSWDEHIMLIGHTVNCFGASVKVIGNT------GSNSTR 137 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~Gst-----GE~~----~Lt~eEr~~li~~~~~~~~grvpVi~gv------g~~st~ 137 (356)
.|.+.++..+..+.+.|++.|+++..- |++. .+. .=.+|++.+.+..+...-|-+.. .+.+.+
T Consensus 83 ~~~~~l~~~L~~~~~~GI~niLaLrGD~p~~~g~~~~~~~~f~--~a~~Lv~~ir~~~g~~f~igvA~yPE~Hp~~~~~~ 160 (310)
T 3apt_A 83 QSRKEVAEVLHRFVESGVENLLALRGDPPRGERVFRPHPEGFR--YAAELVALIRERYGDRVSVGGAAYPEGHPESESLE 160 (310)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECCCCSTTCCSCCCCTTSCS--SHHHHHHHHHHHHGGGSEEEEEECTTCCTTSSCHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEcCCCCCCCCCCCCCCCCCC--CHHHHHHHHHHhCCCCeEEEEEeCCCcCCCCCCHH
Confidence 799999999999999999998765421 3100 122 33466666555533223332211 223566
Q ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc---CCeEEEeCCC
Q 018443 138 EAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM---GPTIIYNVPS 189 (356)
Q Consensus 138 ~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~---~PiilYn~P~ 189 (356)
.-++..+.=.++|||.++.. ++| +.+.+.+|.+.+.+. .||+..=.|-
T Consensus 161 ~d~~~Lk~Kv~aGAdf~iTQ-~ff---D~~~~~~f~~~~r~~Gi~vPIi~GImPi 211 (310)
T 3apt_A 161 ADLRHFKAKVEAGLDFAITQ-LFF---NNAHYFGFLERARRAGIGIPILPGIMPV 211 (310)
T ss_dssp HHHHHHHHHHHHHCSEEEEC-CCS---CHHHHHHHHHHHHHTTCCSCEECEECCC
T ss_pred HHHHHHHHHHHcCCCEEEec-ccC---CHHHHHHHHHHHHHcCCCCeEEEEeccc
Confidence 66666666678999977654 566 678888888888765 5888777663
No 98
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=92.90 E-value=0.56 Score=42.19 Aligned_cols=91 Identities=16% Similarity=0.217 Sum_probs=64.2
Q ss_pred cCceeEeeecccCCCCCCCHHHHHHH--------------------------HHHHHHCCCCEEEEccCcccccCCCHHH
Q 018443 56 ALRLITAIKTPYLPDGRFDLEAYDDL--------------------------VNMQIVNGAEGMIVGGTTGEGQLMSWDE 109 (356)
Q Consensus 56 ~~Gvi~al~TPf~~dg~ID~~~l~~~--------------------------v~~li~~Gv~Gl~v~GstGE~~~Lt~eE 109 (356)
..|++--. +++||+||.+.++++ ++++++.|++-|+..|... +-+..|
T Consensus 90 adGvV~G~---Lt~dg~iD~~~~~~Li~~a~~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~rILTSG~~~---~~~a~~ 163 (224)
T 2bdq_A 90 SDALVLGI---LTSNNHIDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRILLHGSSN---GEPIIE 163 (224)
T ss_dssp CSEEEECC---BCTTSSBCHHHHHHHHHHHTTCCEEECGGGGGSCTTTHHHHHHHHHHTTCCEEEECSCSS---CCCGGG
T ss_pred CCEEEEee---ECCCCCcCHHHHHHHHHHhCCCeEEEECchhccCCcCHHHHHHHHHHcCCCEEECCCCCC---CCcHHH
Confidence 45555444 456999999998887 4567889999998655443 335778
Q ss_pred HHHHHHHHHHHhCCCcEEEEecC--CCCHHHHHHHHHHHHHcCCCEEEEcC
Q 018443 110 HIMLIGHTVNCFGASVKVIGNTG--SNSTREAIHATEQGFAVGMHAALHIN 158 (356)
Q Consensus 110 r~~li~~~~~~~~grvpVi~gvg--~~st~~ai~lar~a~~~Gadavlv~p 158 (356)
-...++..++..++++.|++|-| ..+..+- .+..|++.+=...
T Consensus 164 g~~~L~~Lv~~a~~ri~Im~GgGV~~~Ni~~l------~~~tGv~e~H~s~ 208 (224)
T 2bdq_A 164 NIKHIKALVEYANNRIEIMVGGGVTAENYQYI------CQETGVKQAHGTR 208 (224)
T ss_dssp GHHHHHHHHHHHTTSSEEEECSSCCTTTHHHH------HHHHTCCEEEETT
T ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCHHHHHHH------HHhhCCCEEcccc
Confidence 88888888888889999999655 3344332 3346888877543
No 99
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=92.90 E-value=0.62 Score=42.42 Aligned_cols=94 Identities=11% Similarity=0.069 Sum_probs=65.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEE--ecCCCCHHHHHHHHHHHHHcC
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG--NTGSNSTREAIHATEQGFAVG 150 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~--gvg~~st~~ai~lar~a~~~G 150 (356)
.+.+......+...+.|++.+.+.- .... +.++.+.+.+ ++||++ |++..+.+++++.++.+.+.|
T Consensus 163 ~~~~~~~~~a~~a~~~Gad~i~~~~------~~~~----~~l~~i~~~~--~ipvva~GGi~~~~~~~~~~~~~~~~~~G 230 (273)
T 2qjg_A 163 RDPELVAHAARLGAELGADIVKTSY------TGDI----DSFRDVVKGC--PAPVVVAGGPKTNTDEEFLQMIKDAMEAG 230 (273)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECC------CSSH----HHHHHHHHHC--SSCEEEECCSCCSSHHHHHHHHHHHHHHT
T ss_pred CCHhHHHHHHHHHHHcCCCEEEECC------CCCH----HHHHHHHHhC--CCCEEEEeCCCCCCHHHHHHHHHHHHHcC
Confidence 4556666666888889999776642 2333 3444555544 578766 455445899999999999999
Q ss_pred CCEEEEcCCCCCCCCHHHHHHHHHHHHh
Q 018443 151 MHAALHINPYYGKTSLEGLISHFDSVLS 178 (356)
Q Consensus 151 adavlv~pP~y~~~s~~~l~~y~~~va~ 178 (356)
++++.+..-.+..++..+..+.|.++..
T Consensus 231 a~gv~vg~~i~~~~~~~~~~~~l~~~~~ 258 (273)
T 2qjg_A 231 AAGVAVGRNIFQHDDVVGITRAVCKIVH 258 (273)
T ss_dssp CSEEECCHHHHTSSSHHHHHHHHHHHHH
T ss_pred CcEEEeeHHhhCCCCHHHHHHHHHHHHh
Confidence 9999998777766777666666665544
No 100
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=92.87 E-value=0.32 Score=43.72 Aligned_cols=86 Identities=16% Similarity=0.175 Sum_probs=56.0
Q ss_pred HHHHHHHHHCCCCEEEEccCc--ccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEE
Q 018443 79 DDLVNMQIVNGAEGMIVGGTT--GEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALH 156 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~Gst--GE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv 156 (356)
...++.+.+.|++++++.+.+ |...-.+ .++++.+.+.+ ++|||++=|-.+.++..++. +.|+|++++
T Consensus 155 ~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~----~~~i~~l~~~~--~ipvia~GGI~~~~d~~~~~----~~Gadgv~v 224 (252)
T 1ka9_F 155 VEWAVKGVELGAGEILLTSMDRDGTKEGYD----LRLTRMVAEAV--GVPVIASGGAGRMEHFLEAF----QAGAEAALA 224 (252)
T ss_dssp HHHHHHHHHHTCCEEEEEETTTTTTCSCCC----HHHHHHHHHHC--SSCEEEESCCCSHHHHHHHH----HTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEecccCCCCcCCCC----HHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHH----HCCCHHHHH
Confidence 344555666799999987543 3333333 44555555554 68999976655566555543 579999999
Q ss_pred cCCCCCCC-CHHHHHHHHH
Q 018443 157 INPYYGKT-SLEGLISHFD 174 (356)
Q Consensus 157 ~pP~y~~~-s~~~l~~y~~ 174 (356)
..-.+..+ +.+++.++.+
T Consensus 225 gsal~~~~~~~~~~~~~l~ 243 (252)
T 1ka9_F 225 ASVFHFGEIPIPKLKRYLA 243 (252)
T ss_dssp SHHHHTTSSCHHHHHHHHH
T ss_pred HHHHHcCCCCHHHHHHHHH
Confidence 88766554 7777777643
No 101
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=92.86 E-value=0.3 Score=45.68 Aligned_cols=84 Identities=7% Similarity=-0.033 Sum_probs=65.2
Q ss_pred CCHHHHHHHHHHHHHCCCC---EEEEccCc----c-cccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCC-CHHHHHHHH
Q 018443 73 FDLEAYDDLVNMQIVNGAE---GMIVGGTT----G-EGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN-STREAIHAT 143 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~---Gl~v~Gst----G-E~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~-st~~ai~la 143 (356)
-+.+.+.+.++.+.+.|+| +|-++-++ | -.+.-+.+...++++.+.+.+ ++||++-++.. +.++..+++
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~--~~Pv~vK~~~~~~~~~~~~~a 180 (314)
T 2e6f_A 103 LSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAY--GLPFGVKMPPYFDIAHFDTAA 180 (314)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHH--CSCEEEEECCCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhc--CCCEEEEECCCCCHHHHHHHH
Confidence 5788999999999999999 88876541 1 111226777788898888876 57998876543 677888899
Q ss_pred HHHHHcC-CCEEEEcC
Q 018443 144 EQGFAVG-MHAALHIN 158 (356)
Q Consensus 144 r~a~~~G-adavlv~p 158 (356)
+.++++| +|++.+..
T Consensus 181 ~~~~~aG~~d~i~v~~ 196 (314)
T 2e6f_A 181 AVLNEFPLVKFVTCVN 196 (314)
T ss_dssp HHHHTCTTEEEEEECC
T ss_pred HHHHhcCCceEEEEeC
Confidence 9999999 99998875
No 102
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=92.80 E-value=0.96 Score=43.68 Aligned_cols=45 Identities=9% Similarity=-0.158 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHCCCCEEEEccCccccc-----CCCHHHHHHHHHHHHHH
Q 018443 76 EAYDDLVNMQIVNGAEGMIVGGTTGEGQ-----LMSWDEHIMLIGHTVNC 120 (356)
Q Consensus 76 ~~l~~~v~~li~~Gv~Gl~v~GstGE~~-----~Lt~eEr~~li~~~~~~ 120 (356)
+.+++-++.+..+|++-+-+..+++|.+ ..|.+|-.+.+..+++.
T Consensus 87 ~di~~a~~al~~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ 136 (370)
T 3rmj_A 87 RDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKI 136 (370)
T ss_dssp HHHHHHHHHHTTSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 3344444444445555555555555543 34444444444444443
No 103
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=92.67 E-value=2.6 Score=40.49 Aligned_cols=121 Identities=12% Similarity=0.115 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHCCCCEEEEccCcc----------------cccCCCHHHHHH----HHHHHHHHhCCCcEEEEecCCC-
Q 018443 76 EAYDDLVNMQIVNGAEGMIVGGTTG----------------EGQLMSWDEHIM----LIGHTVNCFGASVKVIGNTGSN- 134 (356)
Q Consensus 76 ~~l~~~v~~li~~Gv~Gl~v~GstG----------------E~~~Lt~eEr~~----li~~~~~~~~grvpVi~gvg~~- 134 (356)
+.+.+-.+...++|.|||=+.|..| |+-- |.+-|.+ +++.+.+.++.+ ||.+=++..
T Consensus 161 ~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGG-slenR~rf~~evv~aVr~~vg~~-~v~vRls~~~ 238 (361)
T 3gka_A 161 AAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGG-SIENRARLLLEVVDAAIDVWSAA-RVGVHLAPRG 238 (361)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSS-SHHHHSHHHHHHHHHHHHHHCGG-GEEEEECTTC
T ss_pred HHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCC-ChhhcHHHHHHHHHHHHHHcCCC-eEEEeccccc
Confidence 3455555666789999999988753 2211 4666654 455555556545 776644432
Q ss_pred ---------CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHH
Q 018443 135 ---------STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTM 203 (356)
Q Consensus 135 ---------st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~L 203 (356)
+.++++++++..+++|+|.+-+..+.+.. .+.+.|.+. .||+.= |- ++++..+++
T Consensus 239 ~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~-------~~~~~ik~~~~iPvi~~------Gg-it~e~a~~~ 304 (361)
T 3gka_A 239 DAHTMGDSDPAATFGHVARELGRRRIAFLFARESFGGD-------AIGQQLKAAFGGPFIVN------EN-FTLDSAQAA 304 (361)
T ss_dssp CSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCSTT-------CCHHHHHHHHCSCEEEE------SS-CCHHHHHHH
T ss_pred ccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCCCH-------HHHHHHHHHcCCCEEEe------CC-CCHHHHHHH
Confidence 35789999999999999999988776322 233444443 576643 22 489998888
Q ss_pred hcCC--CEEEE
Q 018443 204 AQSP--NLAGV 212 (356)
Q Consensus 204 a~~p--nivGi 212 (356)
.+.. .+|++
T Consensus 305 l~~G~aD~V~i 315 (361)
T 3gka_A 305 LDAGQADAVAW 315 (361)
T ss_dssp HHTTSCSEEEE
T ss_pred HHcCCccEEEE
Confidence 7543 34444
No 104
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=92.66 E-value=0.18 Score=48.75 Aligned_cols=94 Identities=16% Similarity=0.182 Sum_probs=59.6
Q ss_pred HHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 159 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP 159 (356)
..++.+.+.|+++|.+.++.|-... +..-..+.+..+.+.+.+++|||+.=|=.+..++.+.. .+|||+|++--|
T Consensus 237 e~a~~a~~~Gad~I~vs~~ggr~~~-~~~~~~~~l~~v~~~~~~~ipvia~GGI~~~~D~~k~l----~~GAdaV~iGr~ 311 (370)
T 1gox_A 237 EDARLAVQHGAAGIIVSNHGARQLD-YVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKAL----ALGAAGVFIGRP 311 (370)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSST-TCCCHHHHHHHHHHHTTTSSCEEEESSCCSHHHHHHHH----HHTCSEEEECHH
T ss_pred HHHHHHHHcCCCEEEECCCCCccCC-CcccHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHH----HcCCCEEeecHH
Confidence 3467788999999999665542111 00123455666667777789998754444555665544 369999999998
Q ss_pred CCCCC---CHHHHHHHHHHHHh
Q 018443 160 YYGKT---SLEGLISHFDSVLS 178 (356)
Q Consensus 160 ~y~~~---s~~~l~~y~~~va~ 178 (356)
+++.. .++++.++.+.+.+
T Consensus 312 ~l~~~~~~G~~gv~~~~~~l~~ 333 (370)
T 1gox_A 312 VVFSLAAEGEAGVKKVLQMMRD 333 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccHHHHHHHHHHHHH
Confidence 77542 34555555555544
No 105
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=92.46 E-value=1.7 Score=38.12 Aligned_cols=110 Identities=13% Similarity=0.154 Sum_probs=65.4
Q ss_pred HHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN 158 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~p 158 (356)
.+.++.+++.|++.+.+....-+.+..+. .++++.+.+..+ ..++++++. +.++ ++.+.+.|+|.+++.+
T Consensus 78 ~~~i~~~~~~Gad~v~l~~~~~~~p~~~~---~~~i~~~~~~~~-~~~v~~~~~--t~~e----~~~~~~~G~d~i~~~~ 147 (223)
T 1y0e_A 78 SKEVDELIESQCEVIALDATLQQRPKETL---DELVSYIRTHAP-NVEIMADIA--TVEE----AKNAARLGFDYIGTTL 147 (223)
T ss_dssp HHHHHHHHHHTCSEEEEECSCSCCSSSCH---HHHHHHHHHHCT-TSEEEEECS--SHHH----HHHHHHTTCSEEECTT
T ss_pred HHHHHHHHhCCCCEEEEeeecccCcccCH---HHHHHHHHHhCC-CceEEecCC--CHHH----HHHHHHcCCCEEEeCC
Confidence 34566678899999987654433222233 456777777663 567766653 3444 4568899999999887
Q ss_pred CCCCCCC-----HHHHHHHHHHHHhc--CCeEEEeCCCCCCCCC-CHHHHHHHhc
Q 018443 159 PYYGKTS-----LEGLISHFDSVLSM--GPTIIYNVPSRTGQDI-PPRVIHTMAQ 205 (356)
Q Consensus 159 P~y~~~s-----~~~l~~y~~~va~~--~PiilYn~P~~tG~~l-s~~~l~~La~ 205 (356)
+.|...+ ...-+++++++.+. .|++. .| .+ +++.+.++.+
T Consensus 148 ~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvia------~G-GI~~~~~~~~~~~ 195 (223)
T 1y0e_A 148 HGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIA------EG-NVITPDMYKRVMD 195 (223)
T ss_dssp TTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEE------ES-SCCSHHHHHHHHH
T ss_pred CcCcCCCCCCCCCcccHHHHHHHHhhCCCCEEE------ec-CCCCHHHHHHHHH
Confidence 7653211 12234566666654 34432 12 24 6777777664
No 106
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=92.40 E-value=0.38 Score=44.86 Aligned_cols=88 Identities=19% Similarity=0.188 Sum_probs=61.5
Q ss_pred cCceeEeeecccCCCCCCCHHHHHHHH------------------------HHHHHCCCCEEEEccCcccccCCCHHHHH
Q 018443 56 ALRLITAIKTPYLPDGRFDLEAYDDLV------------------------NMQIVNGAEGMIVGGTTGEGQLMSWDEHI 111 (356)
Q Consensus 56 ~~Gvi~al~TPf~~dg~ID~~~l~~~v------------------------~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~ 111 (356)
..||+--. +++||+||.+.+++++ +++++.|++-|+..|+.. +..|..
T Consensus 125 AdGvVfG~---L~~dg~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~~~-----~a~~Gl 196 (287)
T 3iwp_A 125 ADGLVFGA---LTEDGHIDKELCMSLMAICRPLPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGCDS-----SALEGL 196 (287)
T ss_dssp CSEEEECC---BCTTSCBCHHHHHHHHHHHTTSCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTTSS-----STTTTH
T ss_pred CCEEEEee---eCCCCCcCHHHHHHHHHHcCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCC-----ChHHhH
Confidence 44555444 4569999999988875 556777999999877522 236888
Q ss_pred HHHHHHHHHhCCCcEEEEecC--CCCHHHHHHHHHHHHHcCCCEEEEc
Q 018443 112 MLIGHTVNCFGASVKVIGNTG--SNSTREAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 112 ~li~~~~~~~~grvpVi~gvg--~~st~~ai~lar~a~~~Gadavlv~ 157 (356)
..++..++.++++++|++|-| ..+..+.+ +..|++.+=..
T Consensus 197 ~~Lk~Lv~~a~~rI~ImaGGGV~~~Ni~~l~------~~tG~~~~H~S 238 (287)
T 3iwp_A 197 PLIKRLIEQAKGRIVVMPGGGITDRNLQRIL------EGSGATEFHCS 238 (287)
T ss_dssp HHHHHHHHHHTTSSEEEECTTCCTTTHHHHH------HHHCCSEEEEC
T ss_pred HHHHHHHHHhCCCCEEEECCCcCHHHHHHHH------HhhCCCEEeEC
Confidence 888888888889999999754 33443332 34688777554
No 107
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=92.39 E-value=1.3 Score=39.55 Aligned_cols=179 Identities=16% Similarity=0.110 Sum_probs=106.5
Q ss_pred cCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCC
Q 018443 56 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 135 (356)
Q Consensus 56 ~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~s 135 (356)
..++++.+. -.|.+....+.+.+++.|++.+=+.-+| +.-.+.++.+.+..++ +++|+|.--
T Consensus 12 ~~~vi~Vir-------~~~~~~a~~~a~al~~gGi~~iEvt~~t--------~~a~~~I~~l~~~~p~---~~IGAGTVl 73 (217)
T 3lab_A 12 TKPLIPVIV-------IDDLVHAIPMAKALVAGGVHLLEVTLRT--------EAGLAAISAIKKAVPE---AIVGAGTVC 73 (217)
T ss_dssp SCSEEEEEC-------CSCGGGHHHHHHHHHHTTCCEEEEETTS--------TTHHHHHHHHHHHCTT---SEEEEECCC
T ss_pred hCCEEEEEE-------cCCHHHHHHHHHHHHHcCCCEEEEeCCC--------ccHHHHHHHHHHHCCC---CeEeecccc
Confidence 456776653 2466778899999999999999774443 3456777777777743 355666554
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHh-c---CCeEEEeCCCCCCCCCCHHHHHHHhcC-CCEE
Q 018443 136 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLS-M---GPTIIYNVPSRTGQDIPPRVIHTMAQS-PNLA 210 (356)
Q Consensus 136 t~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~-~---~PiilYn~P~~tG~~ls~~~l~~La~~-pniv 210 (356)
+.+.++.|.++||+.++. |.+ ..+++++.++.-- . .|++ .|+ .+++.+.+..+. ..+
T Consensus 74 ---t~~~a~~ai~AGA~fivs--P~~----~~evi~~~~~~~v~~~~~~~~~-------PG~-~TptE~~~A~~~Gad~- 135 (217)
T 3lab_A 74 ---TADDFQKAIDAGAQFIVS--PGL----TPELIEKAKQVKLDGQWQGVFL-------PGV-ATASEVMIAAQAGITQ- 135 (217)
T ss_dssp ---SHHHHHHHHHHTCSEEEE--SSC----CHHHHHHHHHHHHHCSCCCEEE-------EEE-CSHHHHHHHHHTTCCE-
T ss_pred ---CHHHHHHHHHcCCCEEEe--CCC----cHHHHHHHHHcCCCccCCCeEe-------CCC-CCHHHHHHHHHcCCCE-
Confidence 467788899999999876 443 4677777666311 0 1333 254 677666655543 333
Q ss_pred EEeecCch-----hhHhhhhC--CCeEEE--ecCcchhHhHHHHcCCceeecccccccHHHHHHHHHcCCcHHH
Q 018443 211 GVKECVGN-----DRVEHYTG--NGIVVW--SGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMFGGKNPSL 275 (356)
Q Consensus 211 GiK~s~~d-----~~i~~~~~--~~~~v~--~G~d~~~l~~~l~~Ga~G~is~~~n~~P~~~~~l~~ag~a~~l 275 (356)
+|..-.. ..++++.. +++.++ .|-+..-+..++..|+..++.| +.+.|+. +.++|+..++
T Consensus 136 -vK~FPa~~~gG~~~lkal~~p~p~i~~~ptGGI~~~N~~~~l~aGa~~~vgG-s~l~~~~---~i~~~~~~~i 204 (217)
T 3lab_A 136 -LKCFPASAIGGAKLLKAWSGPFPDIQFCPTGGISKDNYKEYLGLPNVICAGG-SWLTESK---LLIEGDWNEV 204 (217)
T ss_dssp -EEETTTTTTTHHHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHHSTTBCCEEE-SGGGCHH---HHHHTCHHHH
T ss_pred -EEECccccccCHHHHHHHHhhhcCceEEEeCCCCHHHHHHHHHCCCEEEEEC-hhhcChh---HHhcCCHHHH
Confidence 3654322 12333322 344444 3554434456688898766554 5566543 2345553333
No 108
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=92.34 E-value=0.95 Score=45.11 Aligned_cols=71 Identities=13% Similarity=0.106 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEE
Q 018443 76 EAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAAL 155 (356)
Q Consensus 76 ~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavl 155 (356)
+...+.++++++.|++.+.+..+.|. ..+-.+.++.+.+.++ ++||++|-+ .+.++ ++.+.++|+|++.
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~G~-----~~~~~e~i~~i~~~~p-~~pvi~g~~-~t~e~----a~~l~~~G~d~I~ 304 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAHGH-----SRRVIETLEMIKADYP-DLPVVAGNV-ATPEG----TEALIKAGADAVK 304 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCCS-----SHHHHHHHHHHHHHCT-TSCEEEEEE-CSHHH----HHHHHHTTCSEEE
T ss_pred HhHHHHHHHHHHhCCCEEEEEecCCc-----hHHHHHHHHHHHHHCC-CceEEeCCc-CCHHH----HHHHHHcCCCEEE
Confidence 34566888999999999998776663 2455677777777764 589988743 34444 4777889999999
Q ss_pred Ec
Q 018443 156 HI 157 (356)
Q Consensus 156 v~ 157 (356)
+.
T Consensus 305 v~ 306 (494)
T 1vrd_A 305 VG 306 (494)
T ss_dssp EC
T ss_pred Ec
Confidence 84
No 109
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=92.34 E-value=0.85 Score=42.27 Aligned_cols=102 Identities=15% Similarity=0.013 Sum_probs=70.9
Q ss_pred CCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC---------CCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCC
Q 018443 123 ASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN---------PYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRT 191 (356)
Q Consensus 123 grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~p---------P~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~t 191 (356)
++.-++.++-.. -.|+.++++|+|++++-. |.....|-++++.|-++|++. .|+++=|.|. -
T Consensus 16 g~~i~~~tayDa------~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pf-g 88 (275)
T 1o66_A 16 GEKIAMLTAYES------SFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPF-G 88 (275)
T ss_dssp TCCEEEEECCSH------HHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCT-T
T ss_pred CCcEEEEeCcCH------HHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCC-C
Confidence 343355566553 346777889999998743 333456899999999999987 4788899984 4
Q ss_pred CCCCCHHHH----HHHhcCCCEEEEeecCchh---hHhhhhCCCeEEE
Q 018443 192 GQDIPPRVI----HTMAQSPNLAGVKECVGND---RVEHYTGNGIVVW 232 (356)
Q Consensus 192 G~~ls~~~l----~~La~~pnivGiK~s~~d~---~i~~~~~~~~~v~ 232 (356)
++..+++.. .+|.+ -+..|||.+.+.+ +++.+...++.|+
T Consensus 89 sy~~s~~~a~~na~rl~k-aGa~aVklEdg~e~~~~I~al~~agIpV~ 135 (275)
T 1o66_A 89 AYQQSKEQAFAAAAELMA-AGAHMVKLEGGVWMAETTEFLQMRGIPVC 135 (275)
T ss_dssp SSSSCHHHHHHHHHHHHH-TTCSEEEEECSGGGHHHHHHHHHTTCCEE
T ss_pred CccCCHHHHHHHHHHHHH-cCCcEEEECCcHHHHHHHHHHHHcCCCeE
Confidence 666776543 36777 8899999888752 5555544455443
No 110
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=92.32 E-value=5.3 Score=38.27 Aligned_cols=169 Identities=14% Similarity=0.088 Sum_probs=101.0
Q ss_pred EeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHH
Q 018443 61 TAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAI 140 (356)
Q Consensus 61 ~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai 140 (356)
|.+.-|++. .+ + .++...+...|--|++. ..++.++..+.++.+.+. ++.|+.++++.+. .
T Consensus 47 Pii~apM~~-vt-~----~~lA~avA~~GGlgii~-------~~~s~e~~~~~I~~vk~~--~~~pvga~ig~~~----~ 107 (361)
T 3khj_A 47 PLISSAMDT-VT-E----HLMAVGMARLGGIGIIH-------KNMDMESQVNEVLKVKNS--GGLRVGAAIGVNE----I 107 (361)
T ss_dssp SEEECSSTT-TC-S----HHHHHHHHHTTCEEEEC-------SSSCHHHHHHHHHHHHHT--TCCCCEEEECTTC----H
T ss_pred CEEeecCCC-CC-c----HHHHHHHHHcCCCeEEe-------cCCCHHHHHHHHHHHHhc--cCceEEEEeCCCH----H
Confidence 445566652 21 2 25666566666555542 268999999888877764 4678888887655 7
Q ss_pred HHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCEEEEeecC--
Q 018443 141 HATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKECV-- 216 (356)
Q Consensus 141 ~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~~pnivGiK~s~-- 216 (356)
+.++.+.++|+|.+.+-.+.- ..+.+.+..+++.+. .|+++-| ..+++..+++.+. .+-+||.+.
T Consensus 108 e~a~~l~eaGad~I~ld~a~G---~~~~~~~~i~~i~~~~~~~Vivg~-------v~t~e~A~~l~~a-GaD~I~VG~~~ 176 (361)
T 3khj_A 108 ERAKLLVEAGVDVIVLDSAHG---HSLNIIRTLKEIKSKMNIDVIVGN-------VVTEEATKELIEN-GADGIKVGIGP 176 (361)
T ss_dssp HHHHHHHHTTCSEEEECCSCC---SBHHHHHHHHHHHHHCCCEEEEEE-------ECSHHHHHHHHHT-TCSEEEECSSC
T ss_pred HHHHHHHHcCcCeEEEeCCCC---CcHHHHHHHHHHHHhcCCcEEEcc-------CCCHHHHHHHHHc-CcCEEEEecCC
Confidence 888889999999888754321 235566666666665 5787744 3567888887754 233344321
Q ss_pred --------------chh----hHhhhh-CCCeEEEe--cC-cchhHhHHHHcCCceeeccccccc
Q 018443 217 --------------GND----RVEHYT-GNGIVVWS--GN-DDQCHDARWNHGATGVISVTSNLV 259 (356)
Q Consensus 217 --------------~d~----~i~~~~-~~~~~v~~--G~-d~~~l~~~l~~Ga~G~is~~~n~~ 259 (356)
.+. .+.+.. ..++.|+. |- +..-+..++.+|++|++.++..+.
T Consensus 177 Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~~~~ 241 (361)
T 3khj_A 177 GSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAG 241 (361)
T ss_dssp CTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHHTCSEEEESTTTTT
T ss_pred CcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHcCCCEEEEChhhhc
Confidence 010 111111 12345554 32 111223357899999998876554
No 111
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=92.14 E-value=0.43 Score=43.21 Aligned_cols=85 Identities=16% Similarity=0.177 Sum_probs=49.0
Q ss_pred HHHHHHHHHCCCCEEEEccCc--ccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEE
Q 018443 79 DDLVNMQIVNGAEGMIVGGTT--GEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALH 156 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~Gst--GE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv 156 (356)
...++.+.+.|++.|++.+.+ |-..-.+ .++++.+.+.+ ++|||++=|-.+.+++.++. +.|||++++
T Consensus 159 ~e~~~~~~~~G~~~i~~t~~~~~g~~~g~~----~~~i~~l~~~~--~ipvia~GGI~~~ed~~~~~----~~Gadgv~v 228 (266)
T 2w6r_A 159 RDWVVEVEKRGAGEILLTSIDRDGTKSGYD----TEMIRFVRPLT--TLPIIASGGAGKMEHFLEAF----LAGADAALA 228 (266)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTTCSCCC----HHHHHHHGGGC--CSCEEEESCCCSHHHHHHHH----HHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCCCC----HHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHH----HcCCHHHHc
Confidence 344556667899999986543 3222233 34555555543 68999987766677776654 369999999
Q ss_pred cCCCCCCC-CHHHHHHHH
Q 018443 157 INPYYGKT-SLEGLISHF 173 (356)
Q Consensus 157 ~pP~y~~~-s~~~l~~y~ 173 (356)
..-.+..+ +.+++.+++
T Consensus 229 gsal~~~~~~~~~~~~~l 246 (266)
T 2w6r_A 229 ASVFHFREIDMRELKEYL 246 (266)
T ss_dssp STTTC-------------
T ss_pred cHHHHcCCCCHHHHHHHH
Confidence 98877554 445555543
No 112
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=92.11 E-value=0.3 Score=47.24 Aligned_cols=92 Identities=13% Similarity=0.149 Sum_probs=57.4
Q ss_pred HHHHHHHHCCCCEEEEccCccccc-----------------CCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHH
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGEGQ-----------------LMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHA 142 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE~~-----------------~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~l 142 (356)
..++.+.+.|+++|.+.|..|-.+ .++..+-.. . ++.+.+++|||+.=|=.+-.++++.
T Consensus 221 e~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~---~-v~~~~~~ipvia~GGI~~g~Dv~Ka 296 (365)
T 3sr7_A 221 KTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLL---N-AQPLMDKVEILASGGIRHPLDIIKA 296 (365)
T ss_dssp HHHHHHHHHTCCEEECCCBC--------------CGGGTTCSCBHHHHHH---H-HGGGTTTSEEEECSSCCSHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHHH---H-HHHhcCCCeEEEeCCCCCHHHHHHH
Confidence 345667788999999988766432 233322222 2 2345568999985554556665543
Q ss_pred HHHHHHcCCCEEEEcCCCCCC---CCHHHHHHHHHHHHhc
Q 018443 143 TEQGFAVGMHAALHINPYYGK---TSLEGLISHFDSVLSM 179 (356)
Q Consensus 143 ar~a~~~Gadavlv~pP~y~~---~s~~~l~~y~~~va~~ 179 (356)
..+|||+|++..|+.+. ..++++.++++.+.+.
T Consensus 297 ----LalGAdaV~ig~~~l~a~~~~G~~~v~~~l~~l~~e 332 (365)
T 3sr7_A 297 ----LVLGAKAVGLSRTMLELVEQHSVHEVIAIVNGWKED 332 (365)
T ss_dssp ----HHHTCSEEEESHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred ----HHcCCCEEEECHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 34899999999997643 3456677777766653
No 113
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=92.11 E-value=2.4 Score=37.72 Aligned_cols=82 Identities=13% Similarity=-0.038 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcE--EEEecCCCCHHHHHHHHHHHHHcCCC
Q 018443 75 LEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVK--VIGNTGSNSTREAIHATEQGFAVGMH 152 (356)
Q Consensus 75 ~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvp--Vi~gvg~~st~~ai~lar~a~~~Gad 152 (356)
.+.-...++..++.|++++=+.-..|-......++-.+.++.+++.++ .++ +|.-.+..+.++..+.++.++++|+|
T Consensus 69 ~~~k~~~~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad 147 (225)
T 1mzh_A 69 TSVKVKEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETP-SAVHKVIVETPYLNEEEIKKAVEICIEAGAD 147 (225)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHHHTCS
T ss_pred hhhhHHHHHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 444445567788899999853222222333345666666777777665 233 34344556778899999999999999
Q ss_pred EEEEc
Q 018443 153 AALHI 157 (356)
Q Consensus 153 avlv~ 157 (356)
++-.-
T Consensus 148 ~I~ts 152 (225)
T 1mzh_A 148 FIKTS 152 (225)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 99433
No 114
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=92.09 E-value=1.4 Score=40.92 Aligned_cols=101 Identities=13% Similarity=0.179 Sum_probs=79.6
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHc
Q 018443 70 DGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAV 149 (356)
Q Consensus 70 dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~ 149 (356)
+++.|.+-+.++++.+.+.|++.|.+.-|.| .+++++-.++++.+.+.++ .+|+=++. +++..-++.-+-.|.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G---~~~P~~~~~lv~~l~~~~~-~~~i~~H~-Hn~~Gla~An~laA~~a 224 (298)
T 2cw6_A 150 EGKISPAKVAEVTKKFYSMGCYEISLGDTIG---VGTPGIMKDMLSAVMQEVP-LAALAVHC-HDTYGQALANTLMALQM 224 (298)
T ss_dssp TBSCCHHHHHHHHHHHHHTTCSEEEEEETTS---CCCHHHHHHHHHHHHHHSC-GGGEEEEE-BCTTSCHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEecCCCC---CcCHHHHHHHHHHHHHhCC-CCeEEEEE-CCCCchHHHHHHHHHHh
Confidence 4679999999999999999999999998988 5899999999999998874 56665554 45667778888889999
Q ss_pred CCCEEEEcC------CCC----CCCCHHHHHHHHHH
Q 018443 150 GMHAALHIN------PYY----GKTSLEGLISHFDS 175 (356)
Q Consensus 150 Gadavlv~p------P~y----~~~s~~~l~~y~~~ 175 (356)
|++.+-..- ||. +...-|+++..++.
T Consensus 225 Ga~~vd~tv~GlG~cp~a~g~aGN~~~E~lv~~l~~ 260 (298)
T 2cw6_A 225 GVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEG 260 (298)
T ss_dssp TCCEEEEBTTSCCCCTTSCSSCCBCBHHHHHHHHHH
T ss_pred CCCEEEeecccccCCCCCCCCcCChhHHHHHHHHHh
Confidence 999886533 332 23456777777654
No 115
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=91.95 E-value=0.67 Score=44.11 Aligned_cols=99 Identities=13% Similarity=-0.022 Sum_probs=55.7
Q ss_pred HHHHHHHCCCCEEEEccCccccc-----CCCHHHHHHHHHHHHHHhC-CCcEEEEecCC------CCHHHHHHHHHHHHH
Q 018443 81 LVNMQIVNGAEGMIVGGTTGEGQ-----LMSWDEHIMLIGHTVNCFG-ASVKVIGNTGS------NSTREAIHATEQGFA 148 (356)
Q Consensus 81 ~v~~li~~Gv~Gl~v~GstGE~~-----~Lt~eEr~~li~~~~~~~~-grvpVi~gvg~------~st~~ai~lar~a~~ 148 (356)
-++..+++|++.+-+..++.|.+ ..|.+|-.+.++.+++.+. ....|.+++.. .+.+..+++++.+.+
T Consensus 101 ~i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (337)
T 3ble_A 101 TVDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSK 180 (337)
T ss_dssp HHHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHT
T ss_pred hHHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHH
Confidence 35555666777776666666653 4566665555555555432 22344444322 235566666777777
Q ss_pred cCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcC
Q 018443 149 VGMHAALHINPYYGKTSLEGLISHFDSVLSMG 180 (356)
Q Consensus 149 ~Gadavlv~pP~y~~~s~~~l~~y~~~va~~~ 180 (356)
+|+|.+.+.- ..+..+++++.+.++++.+..
T Consensus 181 ~Ga~~i~l~D-T~G~~~P~~v~~lv~~l~~~~ 211 (337)
T 3ble_A 181 EHIERIFLPD-TLGVLSPEETFQGVDSLIQKY 211 (337)
T ss_dssp SCCSEEEEEC-TTCCCCHHHHHHHHHHHHHHC
T ss_pred cCCCEEEEec-CCCCcCHHHHHHHHHHHHHhc
Confidence 7776655432 344456666666666665543
No 116
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=91.86 E-value=6.5 Score=35.05 Aligned_cols=165 Identities=12% Similarity=0.079 Sum_probs=91.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecC----C--CCHHHHHHHHHHHH
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTG----S--NSTREAIHATEQGF 147 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg----~--~st~~ai~lar~a~ 147 (356)
+..-..++...+.+.|+.|+-+.+ .+-++.+.+.+ ++||+.-.- . .-.....+.++.+.
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~~~-------------~~~i~~ir~~v--~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~ 98 (229)
T 3q58_A 34 KPEIVAAMAQAAASAGAVAVRIEG-------------IENLRTVRPHL--SVPIIGIIKRDLTGSPVRITPYLQDVDALA 98 (229)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEES-------------HHHHHHHGGGC--CSCEEEECBCCCSSCCCCBSCSHHHHHHHH
T ss_pred CcchHHHHHHHHHHCCCcEEEECC-------------HHHHHHHHHhc--CCCEEEEEeecCCCCceEeCccHHHHHHHH
Confidence 345788999999999999998621 23345555554 578874221 0 01112345567788
Q ss_pred HcCCCEEEEcCCCCCCC-CHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHhcC-CCEEEEeec---------
Q 018443 148 AVGMHAALHINPYYGKT-SLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMAQS-PNLAGVKEC--------- 215 (356)
Q Consensus 148 ~~Gadavlv~pP~y~~~-s~~~l~~y~~~va~~-~PiilYn~P~~tG~~ls~~~l~~La~~-pnivGiK~s--------- 215 (356)
++|||.|++....-..+ ..++++++++ +. .+++. +. -+.+...+..+. ..++|+...
T Consensus 99 ~aGad~I~l~~~~~~~p~~l~~~i~~~~---~~g~~v~~-~v-------~t~eea~~a~~~Gad~Ig~~~~g~t~~~~~~ 167 (229)
T 3q58_A 99 QAGADIIAFDASFRSRPVDIDSLLTRIR---LHGLLAMA-DC-------STVNEGISCHQKGIEFIGTTLSGYTGPITPV 167 (229)
T ss_dssp HHTCSEEEEECCSSCCSSCHHHHHHHHH---HTTCEEEE-EC-------SSHHHHHHHHHTTCSEEECTTTTSSSSCCCS
T ss_pred HcCCCEEEECccccCChHHHHHHHHHHH---HCCCEEEE-ec-------CCHHHHHHHHhCCCCEEEecCccCCCCCcCC
Confidence 99999998876432222 3344444444 33 34332 31 246666666543 456654321
Q ss_pred Cchhh-HhhhhCCCeEEEe--cCc--chhHhHHHHcCCceeecccccccHHHHHH
Q 018443 216 VGNDR-VEHYTGNGIVVWS--GND--DQCHDARWNHGATGVISVTSNLVPGMMRE 265 (356)
Q Consensus 216 ~~d~~-i~~~~~~~~~v~~--G~d--~~~l~~~l~~Ga~G~is~~~n~~P~~~~~ 265 (356)
..+.. +.+....++.|+. |-. +.+ ...+.+|++|++.|.+-.-|....+
T Consensus 168 ~~~~~li~~l~~~~ipvIA~GGI~t~~d~-~~~~~~GadgV~VGsai~~p~~~~~ 221 (229)
T 3q58_A 168 EPDLAMVTQLSHAGCRVIAEGRYNTPALA-ANAIEHGAWAVTVGSAITRIEHICQ 221 (229)
T ss_dssp SCCHHHHHHHHTTTCCEEEESSCCSHHHH-HHHHHTTCSEEEECHHHHCHHHHHH
T ss_pred CCCHHHHHHHHHcCCCEEEECCCCCHHHH-HHHHHcCCCEEEEchHhcChHHHHH
Confidence 11221 2233222555543 321 223 2346889999999977776765544
No 117
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=91.82 E-value=0.47 Score=42.57 Aligned_cols=87 Identities=16% Similarity=0.171 Sum_probs=55.9
Q ss_pred HHHHHHHHHHCCCCEEEEccCcccc--cCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEE
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEG--QLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAAL 155 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~--~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavl 155 (356)
....++.+.+.|++.+++.+.+-++ ..... ++++.+.+.+ ++||+++=|-.+.++..++. +.|+|+++
T Consensus 153 ~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~----~~~~~l~~~~--~ipvia~GGI~~~~d~~~~~----~~Gadgv~ 222 (253)
T 1thf_D 153 LRDWVVEVEKRGAGEILLTSIDRDGTKSGYDT----EMIRFVRPLT--TLPIIASGGAGKMEHFLEAF----LAGADAAL 222 (253)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTSCSCCCH----HHHHHHGGGC--CSCEEEESCCCSHHHHHHHH----HTTCSEEE
T ss_pred HHHHHHHHHHCCCCEEEEEeccCCCCCCCCCH----HHHHHHHHhc--CCCEEEECCCCCHHHHHHHH----HcCChHHH
Confidence 3455566677899999987544333 22333 3444444433 68999875555555555543 48999999
Q ss_pred EcCCCCCCC-CHHHHHHHHH
Q 018443 156 HINPYYGKT-SLEGLISHFD 174 (356)
Q Consensus 156 v~pP~y~~~-s~~~l~~y~~ 174 (356)
+..-.|..+ +.++..++++
T Consensus 223 vGsal~~~~~~~~~~~~~l~ 242 (253)
T 1thf_D 223 AASVFHFREIDVRELKEYLK 242 (253)
T ss_dssp ESHHHHTTCSCHHHHHHHHH
T ss_pred HHHHHHcCCCCHHHHHHHHH
Confidence 997766555 7777777754
No 118
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=91.76 E-value=0.26 Score=47.72 Aligned_cols=93 Identities=17% Similarity=0.143 Sum_probs=58.9
Q ss_pred HHHHHHHHCCCCEEEEccCcccccCCCHHH--HH----------------------HHHHHHHHHhCCCcEEEEecCCCC
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDE--HI----------------------MLIGHTVNCFGASVKVIGNTGSNS 135 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eE--r~----------------------~li~~~~~~~~grvpVi~gvg~~s 135 (356)
..++.+.+.|+++|.+.|+.|-. .+.-| |. ..+..+.+.++ ++|||+.=|=.+
T Consensus 202 ~~A~~l~~aGad~I~V~g~GGt~--~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~-~ipvia~GGI~~ 278 (368)
T 3vkj_A 202 ETAKLLYSYGIKNFDTSGQGGTN--WIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVP-DSFLVGSGGIRS 278 (368)
T ss_dssp HHHHHHHHTTCCEEECCCBTSBC--HHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHST-TCEEEEESSCCS
T ss_pred HHHHHHHhCCCCEEEEeCCCCCc--ccchhhhhcccccccchhhccccccccccHHHHHHHHHHHcC-CCcEEEECCCCC
Confidence 45778889999999998876621 11111 10 12233444443 689998555455
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCC--CCHHHHHHHHHHHHhc
Q 018443 136 TREAIHATEQGFAVGMHAALHINPYYGK--TSLEGLISHFDSVLSM 179 (356)
Q Consensus 136 t~~ai~lar~a~~~Gadavlv~pP~y~~--~s~~~l~~y~~~va~~ 179 (356)
..++++ +..+|||+|++..|+.+. ..++++.++++.+.+.
T Consensus 279 ~~d~~k----al~lGA~~v~ig~~~l~~~~~G~~~v~~~l~~l~~e 320 (368)
T 3vkj_A 279 GLDAAK----AIALGADIAGMALPVLKSAIEGKESLEQFFRKIIFE 320 (368)
T ss_dssp HHHHHH----HHHHTCSEEEECHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHHH----HHHcCCCEEEEcHHHHHHHhcChHHHHHHHHHHHHH
Confidence 666554 344799999999987642 2457777777777665
No 119
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=91.72 E-value=4.7 Score=36.19 Aligned_cols=179 Identities=12% Similarity=0.102 Sum_probs=97.5
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHH
Q 018443 65 TPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATE 144 (356)
Q Consensus 65 TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar 144 (356)
|-.++|-.+..+.+++ +.++|+|.|++.||+|= |.++-.++++.+.+ -++|++.=.+.. +.
T Consensus 11 ~~iDPdk~~~~~~~~~----~~~~GtD~i~vGGs~gv----t~~~~~~~v~~ik~---~~~Pvvlfp~~~---~~----- 71 (228)
T 3vzx_A 11 FKLDPNKDLPDEQLEI----LCESGTDAVIIGGSDGV----TEDNVLRMMSKVRR---FLVPCVLEVSAI---EA----- 71 (228)
T ss_dssp EEECTTSCCCTTHHHH----HHTSSCSEEEECCCSCC----CHHHHHHHHHHHTT---SSSCEEEECSCG---GG-----
T ss_pred EeECCCCCCCHHHHHH----HHHcCCCEEEECCcCCC----CHHHHHHHHHHhhc---cCCCEEEeCCCH---HH-----
Confidence 3345555444444443 56899999999998775 66776777766654 478999877764 11
Q ss_pred HHHHcCCCEEEEcC------CCCCCCCHHHHHHHHHHHHh--c-CCe--EEEeCCCCC-------CCCCCHHHHHHHhcC
Q 018443 145 QGFAVGMHAALHIN------PYYGKTSLEGLISHFDSVLS--M-GPT--IIYNVPSRT-------GQDIPPRVIHTMAQS 206 (356)
Q Consensus 145 ~a~~~Gadavlv~p------P~y~~~s~~~l~~y~~~va~--~-~Pi--ilYn~P~~t-------G~~ls~~~l~~La~~ 206 (356)
...|+|++++.. |+|.-..+-+..+-|....+ . .|. ++-| |..+ ...++++.+...+..
T Consensus 72 --v~~gaD~~l~pslln~~~~~~i~g~~~~a~~~~g~~~~~~e~i~~gYivv~-p~s~~~~~~~a~~~~~~e~~~~~a~~ 148 (228)
T 3vzx_A 72 --IVPGFDLYFIPSVLNSKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIAN-PDCKAAALTEADADLNMDDIVAYARV 148 (228)
T ss_dssp --CCSCCSEEEEEEETTBSSGGGTTHHHHHHHHHHHHHHHHSCEEEEEEEECC-SSSHHHHHTTBCCCCCHHHHHHHHHH
T ss_pred --ccccCCEEEEeeecCCCCcchhhhHHHHHHHHcCCCCcccceeeeEEEEEC-CCCcceeeecccCCCCHHHHHHHHHH
Confidence 236999998752 34432222122222221111 2 342 2333 4322 234567777776632
Q ss_pred -----CCEEEEeecCc--hh----hHhhhhCCCeEEEecCc----chhHhHHHHcCCceeeccccccc-HHHHHHHHH
Q 018443 207 -----PNLAGVKECVG--ND----RVEHYTGNGIVVWSGND----DQCHDARWNHGATGVISVTSNLV-PGMMRELMF 268 (356)
Q Consensus 207 -----pnivGiK~s~~--d~----~i~~~~~~~~~v~~G~d----~~~l~~~l~~Ga~G~is~~~n~~-P~~~~~l~~ 268 (356)
=.++.+-.+.. +. ++++.+. +..+..|.. +.. .. +..|+||++.|++-+- |+...++.+
T Consensus 149 a~~~g~~~VYld~sG~~~~~~~i~~i~~~~~-~~Pv~vGGGI~t~e~a-~~-~~~gAD~VVVGSa~v~~p~~~~~~v~ 223 (228)
T 3vzx_A 149 SELLQLPIFYLEYSGVLGDIEAVKKTKAVLE-TSTLFYGGGIKDAETA-KQ-YAEHADVIVVGNAVYEDFDRALKTVA 223 (228)
T ss_dssp HHHTTCSEEEEECTTSCCCHHHHHHHHHHCS-SSEEEEESSCCSHHHH-HH-HHTTCSEEEECTHHHHCHHHHHHHHH
T ss_pred HHHcCCCEEEecCCCCcCCHHHHHHHHHhcC-CCCEEEeCCCCCHHHH-HH-HHhCCCEEEEChHHhcCHHHHHHHHH
Confidence 26776665321 22 2333331 344444432 233 23 3479999998887653 556565543
No 120
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=91.72 E-value=1.5 Score=40.97 Aligned_cols=108 Identities=15% Similarity=0.081 Sum_probs=72.4
Q ss_pred CceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCC-CC
Q 018443 57 LRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGS-NS 135 (356)
Q Consensus 57 ~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~-~s 135 (356)
.|+..-+-||....-..|.+.+...++.-.+.|+|.|=+. .|+|. ++.+++. .++||++-=|. .+
T Consensus 170 ~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~-~t~e~-----------~~~vv~~--~~vPVv~~GG~~~~ 235 (295)
T 3glc_A 170 VGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTY-YVEKG-----------FERIVAG--CPVPIVIAGGKKLP 235 (295)
T ss_dssp TTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEE-CCTTT-----------HHHHHHT--CSSCEEEECCSCCC
T ss_pred cCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeC-CCHHH-----------HHHHHHh--CCCcEEEEECCCCC
Confidence 3544334455432223566667777787788999988654 34431 3444443 36887763332 26
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHh
Q 018443 136 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLS 178 (356)
Q Consensus 136 t~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~ 178 (356)
.+++++.++.+.++||+++.+.-=.|...++..+.+-++++..
T Consensus 236 ~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~dp~~~~~al~~ivh 278 (295)
T 3glc_A 236 EREALEMCWQAIDQGASGVDMGRNIFQSDHPVAMMKAVQAVVH 278 (295)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCeEEEeHHHHhcCcCHHHHHHHHHHHHh
Confidence 8999999999999999999998877777788888887777754
No 121
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=91.70 E-value=0.29 Score=49.45 Aligned_cols=94 Identities=14% Similarity=0.193 Sum_probs=58.2
Q ss_pred HHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHh-----CCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEE
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCF-----GASVKVIGNTGSNSTREAIHATEQGFAVGMHAA 154 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~-----~grvpVi~gvg~~st~~ai~lar~a~~~Gadav 154 (356)
..+..+.+.|+++|.+.|..|-...-... ..+++..+++.+ .+++|||+.=|=.+-.++++.. .+|||+|
T Consensus 355 e~A~~a~~aGad~I~vs~hgG~~~d~~~~-~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaL----alGAdaV 429 (511)
T 1kbi_A 355 EDVIKAAEIGVSGVVLSNHGGRQLDFSRA-PIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKAL----CLGAKGV 429 (511)
T ss_dssp HHHHHHHHTTCSEEEECCTTTTSSTTCCC-HHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHH----HHTCSEE
T ss_pred HHHHHHHHcCCCEEEEcCCCCccCCCCCc-hHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHH----HcCCCEE
Confidence 34677889999999997765532111111 234455555555 4589999855555566665443 4799999
Q ss_pred EEcCCCCCCC---CHHHHHHHHHHHHh
Q 018443 155 LHINPYYGKT---SLEGLISHFDSVLS 178 (356)
Q Consensus 155 lv~pP~y~~~---s~~~l~~y~~~va~ 178 (356)
++-.|+.+.. .++++.++++.+.+
T Consensus 430 ~iGr~~l~~~~~~G~~gv~~~l~~l~~ 456 (511)
T 1kbi_A 430 GLGRPFLYANSCYGRNGVEKAIEILRD 456 (511)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECHHHHHHHHhcChHHHHHHHHHHHH
Confidence 9999876532 34455555554443
No 122
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=91.68 E-value=4.1 Score=39.59 Aligned_cols=122 Identities=17% Similarity=0.152 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHCCCCEEEEccCcc----------------cccCCCHHHHHHH----HHHHHHHhCCCcEEEEecCC--
Q 018443 76 EAYDDLVNMQIVNGAEGMIVGGTTG----------------EGQLMSWDEHIML----IGHTVNCFGASVKVIGNTGS-- 133 (356)
Q Consensus 76 ~~l~~~v~~li~~Gv~Gl~v~GstG----------------E~~~Lt~eEr~~l----i~~~~~~~~grvpVi~gvg~-- 133 (356)
+.+.+-.+...++|.|||=+.+..| |+ -=|.+.|.++ ++.+.+.++.+ ||.+=++.
T Consensus 171 ~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~y-GGslenR~rf~~Eiv~aVr~avg~~-~V~vRls~~~ 248 (402)
T 2hsa_B 171 EDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEY-GGSLANRCKFITQVVQAVVSAIGAD-RVGVRVSPAI 248 (402)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTT-SSSHHHHHHHHHHHHHHHHHHHCGG-GEEEEECSSC
T ss_pred HHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCcc-CcChhhhhHHHHHHHHHHHHHhCCC-cEEEEecccc
Confidence 5566666777889999999888643 22 2246777554 44455555544 66654432
Q ss_pred --------CCHHHHHHHHHHHHHcC------CCEEEEcCCCCCC----C----CHH-HHHHHHHHHHhc--CCeEEEeCC
Q 018443 134 --------NSTREAIHATEQGFAVG------MHAALHINPYYGK----T----SLE-GLISHFDSVLSM--GPTIIYNVP 188 (356)
Q Consensus 134 --------~st~~ai~lar~a~~~G------adavlv~pP~y~~----~----s~~-~l~~y~~~va~~--~PiilYn~P 188 (356)
.+.++++++++.+++.| +|.+-+..+.+.. + +.. .-..+.+.|.+. .||+. +
T Consensus 249 ~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~-~-- 325 (402)
T 2hsa_B 249 DHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFIC-S-- 325 (402)
T ss_dssp CSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCEEE-E--
T ss_pred ccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCCCEEE-e--
Confidence 24678999999999999 9999998765421 2 111 224555566655 57664 2
Q ss_pred CCCCCCCCHHHHHHHhcC
Q 018443 189 SRTGQDIPPRVIHTMAQS 206 (356)
Q Consensus 189 ~~tG~~ls~~~l~~La~~ 206 (356)
|- ++++..+++.+.
T Consensus 326 ---G~-i~~~~a~~~l~~ 339 (402)
T 2hsa_B 326 ---GG-YTRELGIEAVAQ 339 (402)
T ss_dssp ---SS-CCHHHHHHHHHT
T ss_pred ---CC-CCHHHHHHHHHC
Confidence 32 388888888754
No 123
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=91.61 E-value=0.41 Score=45.46 Aligned_cols=74 Identities=14% Similarity=0.159 Sum_probs=46.4
Q ss_pred HHHHHHHHCCCCEEEEccCcccccCCCHHH--------HHHHHHHHHHHhCCCcEEEE--ecCCCCHHHHHHHHHHHHHc
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDE--------HIMLIGHTVNCFGASVKVIG--NTGSNSTREAIHATEQGFAV 149 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eE--------r~~li~~~~~~~~grvpVi~--gvg~~st~~ai~lar~a~~~ 149 (356)
+.++.+++.|+++|.+.++-|- ...+..+ -..++..+++.+ ++|||+ |+. +..++++ |..+
T Consensus 161 e~A~~a~~aGad~Ivvs~hgG~-~~~~~~~~~~g~~g~~~~~l~~v~~~~--~ipVIa~GGI~--~g~Dv~k----alal 231 (336)
T 1ypf_A 161 EAVRELENAGADATKVGIGPGK-VCITKIKTGFGTGGWQLAALRWCAKAA--SKPIIADGGIR--TNGDVAK----SIRF 231 (336)
T ss_dssp HHHHHHHHHTCSEEEECSSCST-TCHHHHHHSCSSTTCHHHHHHHHHHTC--SSCEEEESCCC--STHHHHH----HHHT
T ss_pred HHHHHHHHcCCCEEEEecCCCc-eeecccccCcCCchhHHHHHHHHHHHc--CCcEEEeCCCC--CHHHHHH----HHHc
Confidence 4567778899999998543332 1111111 234555555544 799999 554 3455443 3457
Q ss_pred CCCEEEEcCCCCC
Q 018443 150 GMHAALHINPYYG 162 (356)
Q Consensus 150 Gadavlv~pP~y~ 162 (356)
|||+|++-.|+..
T Consensus 232 GAdaV~iGr~~l~ 244 (336)
T 1ypf_A 232 GATMVMIGSLFAG 244 (336)
T ss_dssp TCSEEEESGGGTT
T ss_pred CCCEEEeChhhhc
Confidence 9999999999773
No 124
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=91.59 E-value=0.93 Score=42.80 Aligned_cols=90 Identities=12% Similarity=0.059 Sum_probs=57.2
Q ss_pred HHHHHHCCCCEEEEccCcc---------c-----------ccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHH
Q 018443 82 VNMQIVNGAEGMIVGGTTG---------E-----------GQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIH 141 (356)
Q Consensus 82 v~~li~~Gv~Gl~v~GstG---------E-----------~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~ 141 (356)
+..+.+.|+|+|.+.|+-| . ...++. .+.+..+.+.++ ++|||+.=|=.+..++.+
T Consensus 198 a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~---~~~l~~v~~~~~-~ipvia~GGI~~~~d~~k 273 (332)
T 1vcf_A 198 ALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPT---ARAILEVREVLP-HLPLVASGGVYTGTDGAK 273 (332)
T ss_dssp HHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBH---HHHHHHHHHHCS-SSCEEEESSCCSHHHHHH
T ss_pred HHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccH---HHHHHHHHHhcC-CCeEEEECCCCCHHHHHH
Confidence 5577889999999965433 1 112232 234455555554 689987544445666654
Q ss_pred HHHHHHHcCCCEEEEcCCCCCC--CCHHHHHHHHHHHHhc
Q 018443 142 ATEQGFAVGMHAALHINPYYGK--TSLEGLISHFDSVLSM 179 (356)
Q Consensus 142 lar~a~~~Gadavlv~pP~y~~--~s~~~l~~y~~~va~~ 179 (356)
.. .+|||+|++..|+.+. ..++++.++++.+.+.
T Consensus 274 al----~~GAd~V~igr~~l~~~~~G~~gv~~~~~~l~~e 309 (332)
T 1vcf_A 274 AL----ALGADLLAVARPLLRPALEGAERVAAWIGDYLEE 309 (332)
T ss_dssp HH----HHTCSEEEECGGGHHHHTTCHHHHHHHHHHHHHH
T ss_pred HH----HhCCChHhhhHHHHHHHhccHHHHHHHHHHHHHH
Confidence 43 3699999999997642 3566777777666553
No 125
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=91.57 E-value=1 Score=41.51 Aligned_cols=101 Identities=13% Similarity=0.007 Sum_probs=69.9
Q ss_pred CCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC---------CCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCC
Q 018443 123 ASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN---------PYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRT 191 (356)
Q Consensus 123 grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~p---------P~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~t 191 (356)
++.-++.++-.. -.|+.++++|+|++++-. |.....|-++++.|-++|++. .|+++=|.|. -
T Consensus 16 g~~i~~~tayD~------~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pf-g 88 (264)
T 1m3u_A 16 KKRFATITAYDY------SFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPF-M 88 (264)
T ss_dssp TCCEEEEECCSH------HHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCT-T
T ss_pred CCcEEEEeCcCH------HHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCC-C
Confidence 343345566553 346777889999999853 222346789999999999987 4788899994 3
Q ss_pred CCCCCHHHHH----HHhcCCCEEEEeecCchh---hHhhhhCCCeEEE
Q 018443 192 GQDIPPRVIH----TMAQSPNLAGVKECVGND---RVEHYTGNGIVVW 232 (356)
Q Consensus 192 G~~ls~~~l~----~La~~pnivGiK~s~~d~---~i~~~~~~~~~v~ 232 (356)
++. +++... +|.+ -+..|||.+.+.+ +++.+.+.++.|+
T Consensus 89 sy~-~~~~a~~~a~rl~k-aGa~aVklEgg~e~~~~I~al~~agipV~ 134 (264)
T 1m3u_A 89 AYA-TPEQAFENAATVMR-AGANMVKIEGGEWLVETVQMLTERAVPVC 134 (264)
T ss_dssp SSS-SHHHHHHHHHHHHH-TTCSEEECCCSGGGHHHHHHHHHTTCCEE
T ss_pred CcC-CHHHHHHHHHHHHH-cCCCEEEECCcHHHHHHHHHHHHCCCCeE
Confidence 555 775433 6777 8899999988863 5555554455443
No 126
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=91.57 E-value=0.79 Score=42.61 Aligned_cols=119 Identities=13% Similarity=0.061 Sum_probs=70.4
Q ss_pred ccCceeEeeecc--cCCCCC-CCHHHHHHHHHHHHHCCCCEEEEcc-Cccc--ccCCCHHHHHHHHHHHHHHhCCCcEEE
Q 018443 55 KALRLITAIKTP--YLPDGR-FDLEAYDDLVNMQIVNGAEGMIVGG-TTGE--GQLMSWDEHIMLIGHTVNCFGASVKVI 128 (356)
Q Consensus 55 ~~~Gvi~al~TP--f~~dg~-ID~~~l~~~v~~li~~Gv~Gl~v~G-stGE--~~~Lt~eEr~~li~~~~~~~~grvpVi 128 (356)
+..|++-. || |.+.|. .|.+...++++.+++.|++-|=++| ||.- -.--..||..+++..+......++||.
T Consensus 7 ~imgilN~--TpDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~piS 84 (280)
T 1eye_A 7 QVMGVLNV--TDDSFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGITVS 84 (280)
T ss_dssp EEEEEEEC--SCCTTCSSCCCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHTTCCEE
T ss_pred EEEEEEeC--CCCCcCCCcccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEE
Confidence 35566654 66 877665 5899999999999999999999988 5422 233346777777765555433367776
Q ss_pred EecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018443 129 GNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNV 187 (356)
Q Consensus 129 ~gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~ 187 (356)
+-+... +-++.|-++|++-|--+.-.-. .++ -+.-+++. .|+++-+.
T Consensus 85 IDT~~~------~va~aAl~aGa~iINdvsg~~~---d~~---m~~~~a~~~~~vVlmh~ 132 (280)
T 1eye_A 85 IDTMRA------DVARAALQNGAQMVNDVSGGRA---DPA---MGPLLAEADVPWVLMHW 132 (280)
T ss_dssp EECSCH------HHHHHHHHTTCCEEEETTTTSS---CTT---HHHHHHHHTCCEEEECC
T ss_pred EeCCCH------HHHHHHHHcCCCEEEECCCCCC---CHH---HHHHHHHhCCeEEEEcC
Confidence 655432 3455566679887766542211 122 23444554 78887775
No 127
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=91.51 E-value=0.95 Score=43.24 Aligned_cols=84 Identities=13% Similarity=0.103 Sum_probs=55.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHH-------HHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHH
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDE-------HIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQ 145 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eE-------r~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~ 145 (356)
...+.+..+++.+.+.|+++|.+-|.+.+. .++..+ ..+++..+.+.+ +++|||++=+=.+.+++.+..
T Consensus 141 ~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~-g~~g~~~~~~~~~~~~~i~~ik~~~-~~iPVianGgI~s~eda~~~l-- 216 (350)
T 3b0p_A 141 ETYRGLAQSVEAMAEAGVKVFVVHARSALL-ALSTKANREIPPLRHDWVHRLKGDF-PQLTFVTNGGIRSLEEALFHL-- 216 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSCBC-----------CCCCCHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHH--
T ss_pred ccHHHHHHHHHHHHHcCCCEEEEecCchhc-ccCcccccCCCcccHHHHHHHHHhC-CCCeEEEECCcCCHHHHHHHH--
Confidence 346678888999999999999998765431 112111 234566666655 378999765555677766654
Q ss_pred HHHcCCCEEEEcCCCCCC
Q 018443 146 GFAVGMHAALHINPYYGK 163 (356)
Q Consensus 146 a~~~Gadavlv~pP~y~~ 163 (356)
+ |||+|++--+.+..
T Consensus 217 --~-GaD~V~iGRa~l~~ 231 (350)
T 3b0p_A 217 --K-RVDGVMLGRAVYED 231 (350)
T ss_dssp --T-TSSEEEECHHHHHC
T ss_pred --h-CCCEEEECHHHHhC
Confidence 3 89999998776643
No 128
>3kdn_A Rubisco, ribulose bisphosphate carboxylase; ribulose-1,5-bisphosphate carboxylase/oxygenase, Ca dioxide fixation, lyase, magnesium; HET: KCX CAP; 2.09A {Thermococcus kodakaraensis} PDB: 3a13_A* 3kdo_A* 3a12_A* 1geh_A*
Probab=91.29 E-value=2.9 Score=41.35 Aligned_cols=95 Identities=15% Similarity=0.166 Sum_probs=72.7
Q ss_pred eeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHH----hCCCcEEEEecCCC
Q 018443 59 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNC----FGASVKVIGNTGSN 134 (356)
Q Consensus 59 vi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~----~~grvpVi~gvg~~ 134 (356)
++-.++ ++.--+.-+.+.+.+-.+...|+|=+====.-+....+.++||...+..+++. ++.+.-..+++++.
T Consensus 157 llgtii---KPklGLs~~~~a~~~ye~~~GGlDfiKDDE~l~~qpf~p~~eRv~~v~eai~rA~~eTGe~k~y~~NiTa~ 233 (444)
T 3kdn_A 157 IYGVVP---KPKVGYSPEEFEKLAYDLLSNGADYMKDDENLTSPWYNRFEERAEIMAKIIDKVENETGEKKTWFANITAD 233 (444)
T ss_dssp EEEECC---SSSSCCCHHHHHHHHHHHHHTTCCEEECCTTCCSCTTSCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCSS
T ss_pred eEEeec---CcccCCCHHHHHHHHHHHHhcCCceeecCcCCCCCCCCCHHHHHHHHHHHHHHHHHhhCCcceEEeecCCC
Confidence 444444 44445899999999999999999976322244567788999999877766654 34444457799987
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEc
Q 018443 135 STREAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 135 st~~ai~lar~a~~~Gadavlv~ 157 (356)
.+|.+++++.|.++|++++|+-
T Consensus 234 -~~eM~~Ra~~a~e~G~~~~mvd 255 (444)
T 3kdn_A 234 -LLEMEQRLEVLADLGLKHAMVD 255 (444)
T ss_dssp -HHHHHHHHHHHHHHTCCEEEEE
T ss_pred -HHHHHHHHHHHHHcCCCEEEEc
Confidence 9999999999999999998875
No 129
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=91.28 E-value=4.7 Score=38.64 Aligned_cols=124 Identities=15% Similarity=0.131 Sum_probs=77.6
Q ss_pred CCHHHHHHHHH-------HHHHCCCCEEEEccCcc----------------cccCCCHHHHHHHHH----HHHHHhCCCc
Q 018443 73 FDLEAYDDLVN-------MQIVNGAEGMIVGGTTG----------------EGQLMSWDEHIMLIG----HTVNCFGASV 125 (356)
Q Consensus 73 ID~~~l~~~v~-------~li~~Gv~Gl~v~GstG----------------E~~~Lt~eEr~~li~----~~~~~~~grv 125 (356)
+..+.+++.++ ...++|.|||=+.|..| |+ -=|.+-|.+++. .+.+.++.+
T Consensus 143 mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~y-GGslenR~rf~~eiv~aVr~~vg~~- 220 (362)
T 4ab4_A 143 LETEEINDIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRY-GGSLENRARLLLEVTDAAIEVWGAQ- 220 (362)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTT-SSSHHHHHHHHHHHHHHHHHHHCGG-
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCC-CCchhhHHHHHHHHHHHHHHhcCCC-
Confidence 45555555544 45679999999988753 11 125666765544 444555544
Q ss_pred EEEEecCCC----------CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCC
Q 018443 126 KVIGNTGSN----------STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQ 193 (356)
Q Consensus 126 pVi~gvg~~----------st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~ 193 (356)
||.+=++.. +.++++++++..+++|+|.+-+..+.... .+.+.|.+. .|||.= |-
T Consensus 221 ~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~-------~~~~~ik~~~~iPvi~~------Gg 287 (362)
T 4ab4_A 221 RVGVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSREREADD-------SIGPLIKEAFGGPYIVN------ER 287 (362)
T ss_dssp GEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCCCTT-------CCHHHHHHHHCSCEEEE------SS
T ss_pred ceEEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCCCCH-------HHHHHHHHHCCCCEEEe------CC
Confidence 776644432 25689999999999999999888765322 233444443 576643 22
Q ss_pred CCCHHHHHHHhcCC--CEEEE
Q 018443 194 DIPPRVIHTMAQSP--NLAGV 212 (356)
Q Consensus 194 ~ls~~~l~~La~~p--nivGi 212 (356)
++++..+++.+.. .+|++
T Consensus 288 -it~e~a~~~l~~g~aD~V~i 307 (362)
T 4ab4_A 288 -FDKASANAALASGKADAVAF 307 (362)
T ss_dssp -CCHHHHHHHHHTTSCSEEEE
T ss_pred -CCHHHHHHHHHcCCccEEEE
Confidence 4899888887543 34444
No 130
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=91.26 E-value=0.69 Score=44.61 Aligned_cols=73 Identities=18% Similarity=0.178 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcc------------------------------cc-----------cCCCHHHHHH
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTG------------------------------EG-----------QLMSWDEHIM 112 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstG------------------------------E~-----------~~Lt~eEr~~ 112 (356)
|.+...+.+++..+.|++++.+.-.+. ++ ..++++
T Consensus 144 d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~---- 219 (368)
T 2nli_A 144 DDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPR---- 219 (368)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHH----
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHH----
Confidence 778888999999889999886644321 11 234433
Q ss_pred HHHHHHHHhCCCcEEEE-ecCCCCHHHHHHHHHHHHHcCCCEEEEcC
Q 018443 113 LIGHTVNCFGASVKVIG-NTGSNSTREAIHATEQGFAVGMHAALHIN 158 (356)
Q Consensus 113 li~~~~~~~~grvpVi~-gvg~~st~~ai~lar~a~~~Gadavlv~p 158 (356)
.++.+.+.+ ++||++ |+ .+ .+.++.++++|+|+|.+..
T Consensus 220 ~i~~lr~~~--~~PvivK~v--~~----~e~a~~a~~~Gad~I~vs~ 258 (368)
T 2nli_A 220 DIEEIAGHS--GLPVFVKGI--QH----PEDADMAIKRGASGIWVSN 258 (368)
T ss_dssp HHHHHHHHS--SSCEEEEEE--CS----HHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHc--CCCEEEEcC--CC----HHHHHHHHHcCCCEEEEcC
Confidence 356666655 578887 55 22 4667899999999999965
No 131
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=91.26 E-value=0.73 Score=44.39 Aligned_cols=70 Identities=10% Similarity=-0.044 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEe-cCCCCHHHHHHHHHHHHHcCCCEE
Q 018443 76 EAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGN-TGSNSTREAIHATEQGFAVGMHAA 154 (356)
Q Consensus 76 ~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~g-vg~~st~~ai~lar~a~~~Gadav 154 (356)
+...+.++.++++|++.|.+-.+.|.. +.-.+.++.+.+... ++||++| +.+ .+.++.+.++|||++
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G~~-----~~~~e~I~~ir~~~~-~~~Vi~G~V~T------~e~A~~a~~aGaD~I 166 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHAHA-----KYVGKTLKSLRQLLG-SRCIMAGNVAT------YAGADYLASCGADII 166 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCCSS-----HHHHHHHHHHHHHHT-TCEEEEEEECS------HHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCCc-----HhHHHHHHHHHHhcC-CCeEEEcCcCC------HHHHHHHHHcCCCEE
Confidence 456678999999999988875555531 222456666666553 6899996 542 355788899999999
Q ss_pred EEc
Q 018443 155 LHI 157 (356)
Q Consensus 155 lv~ 157 (356)
.+.
T Consensus 167 ~Vg 169 (361)
T 3r2g_A 167 KAG 169 (361)
T ss_dssp EEC
T ss_pred EEc
Confidence 984
No 132
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=91.21 E-value=0.98 Score=43.86 Aligned_cols=67 Identities=13% Similarity=0.118 Sum_probs=48.3
Q ss_pred HHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEE
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALH 156 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv 156 (356)
.+.++.+++.|++.+.++.+.| +.+.-.++++.+.+.++ ++||+++... + .+.++.+.++|+|++.+
T Consensus 155 ~~~a~~~~~~G~d~i~i~~~~g-----~~~~~~e~i~~ir~~~~-~~pviv~~v~-~----~~~a~~a~~~Gad~I~v 221 (404)
T 1eep_A 155 IERVEELVKAHVDILVIDSAHG-----HSTRIIELIKKIKTKYP-NLDLIAGNIV-T----KEAALDLISVGADCLKV 221 (404)
T ss_dssp HHHHHHHHHTTCSEEEECCSCC-----SSHHHHHHHHHHHHHCT-TCEEEEEEEC-S----HHHHHHHHTTTCSEEEE
T ss_pred HHHHHHHHHCCCCEEEEeCCCC-----ChHHHHHHHHHHHHHCC-CCeEEEcCCC-c----HHHHHHHHhcCCCEEEE
Confidence 4556778899999998865554 23555677777777664 6899974222 2 46778889999999999
No 133
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=91.16 E-value=1 Score=41.20 Aligned_cols=94 Identities=12% Similarity=0.104 Sum_probs=66.2
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEE--ecCCCCHHHHHHHHHHHHHcCC
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG--NTGSNSTREAIHATEQGFAVGM 151 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~--gvg~~st~~ai~lar~a~~~Ga 151 (356)
+.+......+-..+.|+|.+-+. ++| +. +.++.+++.+ +.+||++ |+...+.+++++.++.+.++||
T Consensus 157 s~~~i~~a~~~a~~~GAD~vkt~-~~~-----~~----e~~~~~~~~~-~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA 225 (263)
T 1w8s_A 157 APEIVAYAARIALELGADAMKIK-YTG-----DP----KTFSWAVKVA-GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGA 225 (263)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEE-CCS-----SH----HHHHHHHHHT-TTSCEEEECCSCCSSHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEc-CCC-----CH----HHHHHHHHhC-CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCC
Confidence 44556665677778999988654 442 33 3345555555 3446544 5554489999999999999999
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHh
Q 018443 152 HAALHINPYYGKTSLEGLISHFDSVLS 178 (356)
Q Consensus 152 davlv~pP~y~~~s~~~l~~y~~~va~ 178 (356)
+++.+..-.|...+.....+-+.++..
T Consensus 226 ~GvsvgraI~~~~dp~~~~~~l~~~v~ 252 (263)
T 1w8s_A 226 LGIAVGRNVWQRRDALKFARALAELVY 252 (263)
T ss_dssp CEEEESHHHHTSTTHHHHHHHHHHHHC
T ss_pred eEEEEehhhcCCcCHHHHHHHHHHHHh
Confidence 999998777777788777777776654
No 134
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=90.97 E-value=1.6 Score=39.77 Aligned_cols=76 Identities=14% Similarity=0.195 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCC--------CHHHHHHHHHHHHH
Q 018443 77 AYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN--------STREAIHATEQGFA 148 (356)
Q Consensus 77 ~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~--------st~~ai~lar~a~~ 148 (356)
.++++++++-+.|.+.+=+.-.|- .|+.++|.++++.+.+. ...|+.-+|.. +..+-|+++++.-+
T Consensus 86 ~~~~yl~~~k~lGf~~iEiS~G~i---~l~~~~~~~~I~~~~~~---G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~Le 159 (251)
T 1qwg_A 86 KFDEFLNECEKLGFEAVEISDGSS---DISLEERNNAIKRAKDN---GFMVLTEVGKKMPDKDKQLTIDDRIKLINFDLD 159 (251)
T ss_dssp CHHHHHHHHHHHTCCEEEECCSSS---CCCHHHHHHHHHHHHHT---TCEEEEEECCSSHHHHTTCCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEECCCcc---cCCHHHHHHHHHHHHHC---CCEEeeeccccCCcccCCCCHHHHHHHHHHHHH
Confidence 678888888889999986655443 38999999999988763 35677766654 45889999999999
Q ss_pred cCCCEEEEcC
Q 018443 149 VGMHAALHIN 158 (356)
Q Consensus 149 ~Gadavlv~p 158 (356)
+||+.|++-.
T Consensus 160 AGA~~ViiEa 169 (251)
T 1qwg_A 160 AGADYVIIEG 169 (251)
T ss_dssp HTCSEEEECC
T ss_pred CCCcEEEEee
Confidence 9999999875
No 135
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=90.94 E-value=1.4 Score=41.06 Aligned_cols=109 Identities=9% Similarity=-0.040 Sum_probs=66.2
Q ss_pred HHHHHHHHHCCCCEEEEccCcccccCC-CHHHHHHH----HHHHHHHh---CCCcEEEEecCCCCHHHHHHHHHHHHHcC
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTGEGQLM-SWDEHIML----IGHTVNCF---GASVKVIGNTGSNSTREAIHATEQGFAVG 150 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstGE~~~L-t~eEr~~l----i~~~~~~~---~grvpVi~gvg~~st~~ai~lar~a~~~G 150 (356)
+..++.+-+.||+..++.++.+-+... +.++-..+ -+.+.+.+ .++..-++++--...+++++..+++.+.|
T Consensus 61 ~~~l~~m~~~GV~~~V~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~p~r~~~~~~l~~~~~~~a~~el~~~~~~g 140 (334)
T 2hbv_A 61 AFRIEEMDAQGVDVQVTCATPVMFGYTWEANKAAQWAERMNDFALEFAAHNPQRIKVLAQVPLQDLDLACKEASRAVAAG 140 (334)
T ss_dssp HHHHHHHHHHTCSEEEEEECGGGCCTTSCHHHHHHHHHHHHHHHHHHHTTCTTTEEECBCCCTTSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCEEEECCCchhccCCCCHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEecCccCHHHHHHHHHHHHHcC
Confidence 455666667899998887765432222 33332222 23333333 33433333444445567888888777889
Q ss_pred CCEEEEcCCCC-CCCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018443 151 MHAALHINPYY-GKTSLEGLISHFDSVLSM-GPTIIYNV 187 (356)
Q Consensus 151 adavlv~pP~y-~~~s~~~l~~y~~~va~~-~PiilYn~ 187 (356)
+.||-+.+-+- ..++++.+...|+.+.+. +||+++--
T Consensus 141 ~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~~lpv~iH~~ 179 (334)
T 2hbv_A 141 HLGIQIGNHLGDKDLDDATLEAFLTHCANEDIPILVHPW 179 (334)
T ss_dssp CCCEEEESCBTTBCTTSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CeEEEECCCCCCCCCCcHHHHHHHHHHHHCCCEEEECCC
Confidence 99997654322 234667888888888876 79999864
No 136
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=90.92 E-value=4.9 Score=36.02 Aligned_cols=102 Identities=18% Similarity=0.136 Sum_probs=78.4
Q ss_pred ceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCC-CcEEEEecCCCCH
Q 018443 58 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA-SVKVIGNTGSNST 136 (356)
Q Consensus 58 Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~g-rvpVi~gvg~~st 136 (356)
|+-.+.++-| +.|.-..+.-..-++. ++.|++-|=+.-.-|..-+=.+++-.+-+..+++.+++ -+|||.-++..+.
T Consensus 50 gv~v~tvigF-P~G~~~~~~k~~E~~~-i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~Lt~ 127 (226)
T 1vcv_A 50 KVKLCVVADF-PFGALPTASRIALVSR-LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPYLRD 127 (226)
T ss_dssp SSEEEEEEST-TTCCSCHHHHHHHHHH-HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCH
T ss_pred CCeEEEEeCC-CCCCCchHHHHHHHHH-HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccCCCH
Confidence 4445556677 4677888888888999 99999999666666655444567766777777777654 5789999998888
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCCC
Q 018443 137 REAIHATEQGFAVGMHAALHINPYY 161 (356)
Q Consensus 137 ~~ai~lar~a~~~Gadavlv~pP~y 161 (356)
++-+..++.+.++|||.|=...=|.
T Consensus 128 eei~~a~~ia~eaGADfVKTSTGf~ 152 (226)
T 1vcv_A 128 EERYTLYDIIAEAGAHFIKSSTGFA 152 (226)
T ss_dssp HHHHHHHHHHHHHTCSEEECCCSCC
T ss_pred HHHHHHHHHHHHcCCCEEEeCCCCC
Confidence 8888899999999999998765443
No 137
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=90.92 E-value=1.3 Score=42.24 Aligned_cols=84 Identities=11% Similarity=0.056 Sum_probs=60.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccC----------cccccCCCHHHHHHHHHHHHHHhCCCcEEEE----ecCCC-CHHH
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGT----------TGEGQLMSWDEHIMLIGHTVNCFGASVKVIG----NTGSN-STRE 138 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~Gs----------tGE~~~Lt~eEr~~li~~~~~~~~grvpVi~----gvg~~-st~~ 138 (356)
|.+.+.+.++.+.+.|+|+|=+++. .|-...-..+--.++++.+.+.+ .+||.+ |.... +.++
T Consensus 68 ~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v--~~PV~vKiR~g~~~~~~~~~ 145 (350)
T 3b0p_A 68 DPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV--RVPVTVKMRLGLEGKETYRG 145 (350)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC--SSCEEEEEESCBTTCCCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh--CCceEEEEecCcCccccHHH
Confidence 5688999999999999999988863 12222224445556666666655 578877 33222 3468
Q ss_pred HHHHHHHHHHcCCCEEEEcCC
Q 018443 139 AIHATEQGFAVGMHAALHINP 159 (356)
Q Consensus 139 ai~lar~a~~~Gadavlv~pP 159 (356)
++++++.++++|+|++.+..-
T Consensus 146 ~~~~a~~l~~aG~d~I~V~~r 166 (350)
T 3b0p_A 146 LAQSVEAMAEAGVKVFVVHAR 166 (350)
T ss_dssp HHHHHHHHHHTTCCEEEEECS
T ss_pred HHHHHHHHHHcCCCEEEEecC
Confidence 999999999999999998653
No 138
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=90.80 E-value=0.63 Score=44.94 Aligned_cols=68 Identities=13% Similarity=0.264 Sum_probs=48.2
Q ss_pred HHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEE
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALH 156 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv 156 (356)
..+.++.+++.|++.|.+..+.|. .++-.+.++.+.+.. ++++|++|... +.+.++.+.++|||++.+
T Consensus 109 ~~~~~~~lieaGvd~I~idta~G~-----~~~~~~~I~~ik~~~-p~v~Vi~G~v~-----t~e~A~~a~~aGAD~I~v 176 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLIDSSHGH-----SEGVLQRIRETRAAY-PHLEIIGGNVA-----TAEGARALIEAGVSAVKV 176 (366)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTT-----SHHHHHHHHHHHHHC-TTCEEEEEEEC-----SHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCC-----CHHHHHHHHHHHHhc-CCCceEeeeeC-----CHHHHHHHHHcCCCEEEE
Confidence 345678889999999987554442 245566777777665 36899887432 245677788899999998
No 139
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=90.76 E-value=0.78 Score=40.63 Aligned_cols=87 Identities=16% Similarity=0.160 Sum_probs=54.3
Q ss_pred HHHHHHHHHCCCCEEEEccCccccc--CCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEE
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTGEGQ--LMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALH 156 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstGE~~--~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv 156 (356)
...++.+.+.|++.+++.+-+-++. ..+. +.++.+.+.. ++||+++=|-.+.++..++ .++|||++++
T Consensus 157 ~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~----~~i~~l~~~~--~~pvia~GGi~~~~~~~~~----~~~Ga~~v~v 226 (253)
T 1h5y_A 157 VKWAKEVEELGAGEILLTSIDRDGTGLGYDV----ELIRRVADSV--RIPVIASGGAGRVEHFYEA----AAAGADAVLA 226 (253)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTTCSCCCH----HHHHHHHHHC--SSCEEEESCCCSHHHHHHH----HHTTCSEEEE
T ss_pred HHHHHHHHhCCCCEEEEecccCCCCcCcCCH----HHHHHHHHhc--CCCEEEeCCCCCHHHHHHH----HHcCCcHHHH
Confidence 3446677788999998865432222 2232 3344444443 6899987665555555543 3589999999
Q ss_pred cCCCCCC-CCHHHHHHHHHH
Q 018443 157 INPYYGK-TSLEGLISHFDS 175 (356)
Q Consensus 157 ~pP~y~~-~s~~~l~~y~~~ 175 (356)
..-.+.. .+.+++.+++++
T Consensus 227 gsal~~~~~~~~~~~~~l~~ 246 (253)
T 1h5y_A 227 ASLFHFRVLSIAQVKRYLKE 246 (253)
T ss_dssp SHHHHTTSSCHHHHHHHHHH
T ss_pred HHHHHcCCCCHHHHHHHHHH
Confidence 8776644 356777777643
No 140
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=90.46 E-value=0.7 Score=43.19 Aligned_cols=101 Identities=15% Similarity=0.136 Sum_probs=79.5
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHc
Q 018443 70 DGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAV 149 (356)
Q Consensus 70 dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~ 149 (356)
++..|.+-+.+.++.+.+.|++.|.+.-|.|- +++++-.++++.+.+.++ .+|+-++. +++.--+++-+..|.++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~---~~P~~~~~lv~~l~~~~~-~~~l~~H~-Hn~~Gla~An~laAv~a 227 (302)
T 2ftp_A 153 DGDVDPRQVAWVARELQQMGCYEVSLGDTIGV---GTAGATRRLIEAVASEVP-RERLAGHF-HDTYGQALANIYASLLE 227 (302)
T ss_dssp TBCCCHHHHHHHHHHHHHTTCSEEEEEESSSC---CCHHHHHHHHHHHTTTSC-GGGEEEEE-BCTTSCHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCC---cCHHHHHHHHHHHHHhCC-CCeEEEEe-CCCccHHHHHHHHHHHh
Confidence 46899999999999999999999999988885 799999999999887763 57777665 44566677888889999
Q ss_pred CCCEEEEcCC------C----CCCCCHHHHHHHHHH
Q 018443 150 GMHAALHINP------Y----YGKTSLEGLISHFDS 175 (356)
Q Consensus 150 Gadavlv~pP------~----y~~~s~~~l~~y~~~ 175 (356)
|++.|=..-- | .+..+-|+++.+++.
T Consensus 228 Ga~~vd~tv~GlG~cp~a~gr~GN~~~E~lv~~l~~ 263 (302)
T 2ftp_A 228 GIAVFDSSVAGLGGCPYAKGATGNVASEDVLYLLNG 263 (302)
T ss_dssp TCCEEEEBGGGCCBCGGGTTCBCBCBHHHHHHHHHH
T ss_pred CCCEEEecccccCCCCCCCCCCCChhHHHHHHHHHh
Confidence 9999876543 2 233556777766653
No 141
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=90.38 E-value=3.6 Score=39.71 Aligned_cols=125 Identities=13% Similarity=0.046 Sum_probs=78.8
Q ss_pred HHHHHHHHHHH-HCCCCEEEEccC-----------------cccccCCCHHHHHHHHHHHHH----HhCCCcEEEEec--
Q 018443 76 EAYDDLVNMQI-VNGAEGMIVGGT-----------------TGEGQLMSWDEHIMLIGHTVN----CFGASVKVIGNT-- 131 (356)
Q Consensus 76 ~~l~~~v~~li-~~Gv~Gl~v~Gs-----------------tGE~~~Lt~eEr~~li~~~~~----~~~grvpVi~gv-- 131 (356)
+.+.+-.+... ++|.|||=+.+. |.|+--.|.+.|.+++..+++ .++.+ ||.+=+
T Consensus 174 ~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~-~v~vRis~ 252 (379)
T 3aty_A 174 PLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSD-RVGLRISP 252 (379)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGG-GEEEEECT
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCC-eEEEEECc
Confidence 44556666778 899999988765 445444477878766555544 44434 565522
Q ss_pred --------CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCC-HHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHH
Q 018443 132 --------GSNSTREAIHATEQGFAVGMHAALHINPYYGKTS-LEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVI 200 (356)
Q Consensus 132 --------g~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s-~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l 200 (356)
+..+.++++++++..++.|+|.+-+..+.+..+. +. . .+.|.+. .||+.= -| ++++..
T Consensus 253 ~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~---~-~~~ir~~~~iPvi~~-----G~--it~~~a 321 (379)
T 3aty_A 253 LNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGD---V-VAWVRGSYSGVKISN-----LR--YDFEEA 321 (379)
T ss_dssp TCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSCCCCC---H-HHHHHTTCCSCEEEE-----SS--CCHHHH
T ss_pred ccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCCccH---H-HHHHHHHCCCcEEEE-----CC--CCHHHH
Confidence 2346788999999999999999998875431110 11 2 4455554 576642 12 388888
Q ss_pred HHHhcCC--CEEEE
Q 018443 201 HTMAQSP--NLAGV 212 (356)
Q Consensus 201 ~~La~~p--nivGi 212 (356)
+++.+.. .+|++
T Consensus 322 ~~~l~~g~aD~V~i 335 (379)
T 3aty_A 322 DQQIREGKVDAVAF 335 (379)
T ss_dssp HHHHHTTSCSEEEE
T ss_pred HHHHHcCCCeEEEe
Confidence 8887543 34444
No 142
>1wdd_A Ribulose bisphosphate carboxylase large chain; rubisco, photosynthesis, alpha/beta barrel, N-methylmethioni translational modification, lyase; HET: KCX CAP; 1.35A {Oryza sativa} SCOP: c.1.14.1 d.58.9.1 PDB: 3axk_A* 3axm_A* 1rlc_L* 4rub_A* 3rub_L 1ej7_L 1aa1_L* 1aus_L 1rbo_L* 1rco_L* 1rcx_L* 1rxo_L* 1gk8_A* 1ir2_A* 1uzd_A* 1uzh_A* 2v69_A* 1uwa_A* 2v63_A* 2v67_A* ...
Probab=90.30 E-value=3.9 Score=40.73 Aligned_cols=94 Identities=12% Similarity=0.161 Sum_probs=71.1
Q ss_pred eecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEcc-CcccccCCCHHHHHHHHHHHHH----HhCCCcEEEEecCCCCHH
Q 018443 63 IKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGG-TTGEGQLMSWDEHIMLIGHTVN----CFGASVKVIGNTGSNSTR 137 (356)
Q Consensus 63 l~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~G-stGE~~~Lt~eEr~~li~~~~~----~~~grvpVi~gvg~~st~ 137 (356)
+-|-+.+.--+.-+.+.+.+-.+...|+|=+= .- .-+....+.++||...+-.+++ .++.+.-..+++++.+.+
T Consensus 170 lgtiiKPklGLs~~~~a~~~ye~~~GGlDfiK-DDE~l~~qpf~p~~eR~~~v~eai~rA~~eTGe~k~~~~NiTa~~~~ 248 (477)
T 1wdd_A 170 LGCTIKPKLGLSAKNYGRACYECLRGGLDFTK-DDENVNSQPFMRWRDRFVFCAEAIYKSQAETGEIKGHYLNATAGTCE 248 (477)
T ss_dssp EECBCSSSSCCCHHHHHHHHHHHHHTTCSEEE-CCTTCSSBTTBCHHHHHHHHHHHHHHHHHHHSSCCEEEEECCCSSHH
T ss_pred EEeecCccccCCHHHHHHHHHHHHhcCCceee-CCccCCCCCCCcHHHHHHHHHHHHHHHHHhhCCcceeecCcCCCCHH
Confidence 44555665558999999999999999999542 22 3355667889999875544443 344444457799998899
Q ss_pred HHHHHHHHHHHcCCCEEEEc
Q 018443 138 EAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 138 ~ai~lar~a~~~Gadavlv~ 157 (356)
|.+++++.+++.|+.++|+-
T Consensus 249 eM~~Ra~~a~e~G~~~~mvd 268 (477)
T 1wdd_A 249 EMIKRAVFARELGVPIVMHD 268 (477)
T ss_dssp HHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHhCCCeEEEe
Confidence 99999999999999999986
No 143
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=90.24 E-value=0.52 Score=44.33 Aligned_cols=101 Identities=12% Similarity=0.155 Sum_probs=80.6
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHc
Q 018443 70 DGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAV 149 (356)
Q Consensus 70 dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~ 149 (356)
+++.|.+-+.+.++.+.+.|++.|.+.-|.| .+++++-.++++.+.+.++ .+|+=++. +++.--++.-+..|.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G---~~~P~~v~~lv~~l~~~~~-~~~l~~H~-Hnd~Gla~AN~laAv~a 225 (307)
T 1ydo_A 151 EKDVPIEQVIRLSEALFEFGISELSLGDTIG---AANPAQVETVLEALLARFP-ANQIALHF-HDTRGTALANMVTALQM 225 (307)
T ss_dssp TBCCCHHHHHHHHHHHHHHTCSCEEEECSSC---CCCHHHHHHHHHHHHTTSC-GGGEEEEC-BGGGSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEEEcCCCC---CcCHHHHHHHHHHHHHhCC-CCeEEEEE-CCCCchHHHHHHHHHHh
Confidence 4789999999999999999999999999999 5899999999999988764 46665554 56677788888899999
Q ss_pred CCCEEEEcCC------C----CCCCCHHHHHHHHHH
Q 018443 150 GMHAALHINP------Y----YGKTSLEGLISHFDS 175 (356)
Q Consensus 150 Gadavlv~pP------~----y~~~s~~~l~~y~~~ 175 (356)
||+.+=..-- | .+..+-|+++..++.
T Consensus 226 Ga~~vd~tv~GlGecp~a~graGN~~~E~lv~~L~~ 261 (307)
T 1ydo_A 226 GITVFDGSAGGLGGCPYAPGSSGNAATEDIVYMLEQ 261 (307)
T ss_dssp TCCEEEEBGGGCCEETTEEEEECBCBHHHHHHHHHH
T ss_pred CCCEEEEcccccCCCCCCCCCCCChhHHHHHHHHHh
Confidence 9999876543 2 234566777766653
No 144
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=90.21 E-value=0.96 Score=42.06 Aligned_cols=118 Identities=21% Similarity=0.231 Sum_probs=73.2
Q ss_pred ccCceeEeeecc--cCCCCC-CCHHHHHHHHHHHHHCCCCEEEEcc-Ccccc-cCCC-HHHHHHHHHHHHHHhCC-CcEE
Q 018443 55 KALRLITAIKTP--YLPDGR-FDLEAYDDLVNMQIVNGAEGMIVGG-TTGEG-QLMS-WDEHIMLIGHTVNCFGA-SVKV 127 (356)
Q Consensus 55 ~~~Gvi~al~TP--f~~dg~-ID~~~l~~~v~~li~~Gv~Gl~v~G-stGE~-~~Lt-~eEr~~li~~~~~~~~g-rvpV 127 (356)
+..|++- +|| |.+.|+ .|.+...++++.+++.|++-|=++| ||.-+ ...+ .||..+++..+...... ++||
T Consensus 16 ~imGilN--~TpdSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~pi 93 (282)
T 1aj0_A 16 HVMGILN--VTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWI 93 (282)
T ss_dssp EEEEEEE--CCTTTSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred EEEEEEe--CCCCccccccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeE
Confidence 4577744 466 865564 5789999999999999999999999 66332 2333 56666666544433221 5676
Q ss_pred EEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018443 128 IGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNV 187 (356)
Q Consensus 128 i~gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~ 187 (356)
.+-+.. . +-++.|-++|++-|--+.-. ..+++ +.-+++. .|+++-+.
T Consensus 94 SIDT~~--~----~va~aAl~aGa~iINdvsg~----~d~~~---~~~~a~~~~~vVlmh~ 141 (282)
T 1aj0_A 94 SVDTSK--P----EVIRESAKVGAHIINDIRSL----SEPGA---LEAAAETGLPVCLMHM 141 (282)
T ss_dssp EEECCC--H----HHHHHHHHTTCCEEEETTTT----CSTTH---HHHHHHHTCCEEEECC
T ss_pred EEeCCC--H----HHHHHHHHcCCCEEEECCCC----CCHHH---HHHHHHhCCeEEEEcc
Confidence 655543 2 33455556698877766533 22233 3344444 68887764
No 145
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=90.21 E-value=7.8 Score=35.02 Aligned_cols=114 Identities=15% Similarity=0.080 Sum_probs=79.9
Q ss_pred ceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCC-CcEEEEecCCCCH
Q 018443 58 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA-SVKVIGNTGSNST 136 (356)
Q Consensus 58 Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~g-rvpVi~gvg~~st 136 (356)
++-.+.++=| +-|....+.-...++..++.|++-|=+-=..|+.-+=.+++-.+-++.+++.+++ -++||.=++-.+.
T Consensus 78 ~v~v~tVigF-P~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~ 156 (239)
T 3ngj_A 78 GVKVCTVIGF-PLGATPSEVKAYETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTN 156 (239)
T ss_dssp SCEEEEEEST-TTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGSCH
T ss_pred CCeEEEEecc-CCCCCchHHHHHHHHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCCCH
Confidence 4444445556 3677777888888899999999998666666665555566666667777776654 3678887777777
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCCC-CCCCHHHHHHH
Q 018443 137 REAIHATEQGFAVGMHAALHINPYY-GKTSLEGLISH 172 (356)
Q Consensus 137 ~~ai~lar~a~~~Gadavlv~pP~y-~~~s~~~l~~y 172 (356)
++-+..++.+.++|||.|=...=|- ...|.+++..+
T Consensus 157 eei~~a~~ia~~aGADfVKTSTGf~~ggAt~~dv~lm 193 (239)
T 3ngj_A 157 EEKVEVCKRCVAAGAEYVKTSTGFGTHGATPEDVKLM 193 (239)
T ss_dssp HHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHCcCEEECCCCCCCCCCCHHHHHHH
Confidence 8888888889999999987765443 33455554443
No 146
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=90.18 E-value=2.1 Score=40.28 Aligned_cols=84 Identities=12% Similarity=-0.008 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccCccc----ccCCCHHHHHHHHHHHHHHh-------CCCcEEEEecCC-CCHHHHHHH
Q 018443 75 LEAYDDLVNMQIVNGAEGMIVGGTTGE----GQLMSWDEHIMLIGHTVNCF-------GASVKVIGNTGS-NSTREAIHA 142 (356)
Q Consensus 75 ~~~l~~~v~~li~~Gv~Gl~v~GstGE----~~~Lt~eEr~~li~~~~~~~-------~grvpVi~gvg~-~st~~ai~l 142 (356)
.+.+.+.++.+.+ |+|++-++.++-- -..-..+.-.++++.+.+.+ +.++||++=+.. .+.++..+.
T Consensus 152 ~~~~~~aa~~~~~-g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~ 230 (336)
T 1f76_A 152 KDDYLICMEKIYA-YAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQV 230 (336)
T ss_dssp HHHHHHHHHHHGG-GCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHH
T ss_pred HHHHHHHHHHHhc-cCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHH
Confidence 6677777776655 9999988764211 11113344457777777766 346899987654 456788999
Q ss_pred HHHHHHcCCCEEEEcCC
Q 018443 143 TEQGFAVGMHAALHINP 159 (356)
Q Consensus 143 ar~a~~~Gadavlv~pP 159 (356)
++.++++|+|++.+..-
T Consensus 231 a~~l~~~Gvd~i~vsn~ 247 (336)
T 1f76_A 231 ADSLVRHNIDGVIATNT 247 (336)
T ss_dssp HHHHHHTTCSEEEECCC
T ss_pred HHHHHHcCCcEEEEeCC
Confidence 99999999999998863
No 147
>1bwv_A Rubisco, protein (ribulose bisphosphate carboxylase); carbon dioxide fixation, complex (rubisco-reaction intermedi high specificity factor; HET: KCX CAP; 2.40A {Galdieria partita} SCOP: c.1.14.1 d.58.9.1 PDB: 1iwa_A 1bxn_A
Probab=89.90 E-value=4.1 Score=40.69 Aligned_cols=94 Identities=14% Similarity=0.144 Sum_probs=71.1
Q ss_pred eecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEcc-CcccccCCCHHHHHHHHHHHHH----HhCCCcEEEEecCCCCHH
Q 018443 63 IKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGG-TTGEGQLMSWDEHIMLIGHTVN----CFGASVKVIGNTGSNSTR 137 (356)
Q Consensus 63 l~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~G-stGE~~~Lt~eEr~~li~~~~~----~~~grvpVi~gvg~~st~ 137 (356)
+-|-+.+.--+.-+.+.+.+-.+...|+|=+= .- .-+....+.++||...+..+++ .++.+.-..+++++.+.+
T Consensus 179 lgtiiKPklGLsp~~~a~~~ye~~~GGlDfiK-DDE~l~~qpf~p~~eR~~~v~eai~rA~~eTGe~k~~~~NiTa~~~~ 257 (493)
T 1bwv_A 179 LGCTTKPKLGLSGKNYGRVVYEALKGGLDFVK-DDENINSQPFMRWRERYLFTMEAVNKASAATGEVKGHYLNVTAATME 257 (493)
T ss_dssp EECBCSSSSCCCHHHHHHHHHHHHHHTCSEEE-CCTTCSSBTTBCHHHHHHHHHHHHHHHHHHHTSCCEEEEECCCSSHH
T ss_pred EEeecCCccCCCHHHHHHHHHHHHhcCCCccc-CccccCCCCCCcHHHHHHHHHHHHHHHHHhhCCcceeeccCCCCCHH
Confidence 44555665558999999999999999999552 22 3345667889999875554444 344444457799998899
Q ss_pred HHHHHHHHHHHcCCCEEEEc
Q 018443 138 EAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 138 ~ai~lar~a~~~Gadavlv~ 157 (356)
|.+++++.++++|+.++|+-
T Consensus 258 eM~~Ra~~a~e~G~~~~mvd 277 (493)
T 1bwv_A 258 EMYARANFAKELGSVIIMID 277 (493)
T ss_dssp HHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHhCCCeEEEe
Confidence 99999999999999999986
No 148
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=89.89 E-value=0.83 Score=42.48 Aligned_cols=101 Identities=14% Similarity=0.087 Sum_probs=69.9
Q ss_pred CCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC---------CCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCC
Q 018443 123 ASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN---------PYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRT 191 (356)
Q Consensus 123 grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~p---------P~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~t 191 (356)
++.-++.++-.. -.|+.++++|+|++++-. |.....|-++++.|-++|++. .|+++=|.|. -
T Consensus 33 g~~i~~~tayDa------~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pf-g 105 (281)
T 1oy0_A 33 GHKWAMLTAYDY------STARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPF-G 105 (281)
T ss_dssp TCCEEEEECCSH------HHHHHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEEEECCT-T
T ss_pred CCcEEEEeCcCH------HHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEEECCC-C
Confidence 443456666553 346777899999998743 233456789999999999987 5888899994 4
Q ss_pred CCCCCHHH----HHHHhcCCCEEEEeecCchh---hHhhhhCCCeE
Q 018443 192 GQDIPPRV----IHTMAQSPNLAGVKECVGND---RVEHYTGNGIV 230 (356)
Q Consensus 192 G~~ls~~~----l~~La~~pnivGiK~s~~d~---~i~~~~~~~~~ 230 (356)
++..+++. ..++.+--++.|||.+.+.+ +++.+...++.
T Consensus 106 sy~~s~~~a~~na~rl~~eaGa~aVklEdg~e~~~~I~al~~agIp 151 (281)
T 1oy0_A 106 SYEAGPTAALAAATRFLKDGGAHAVKLEGGERVAEQIACLTAAGIP 151 (281)
T ss_dssp SSTTCHHHHHHHHHHHHHTTCCSEEEEEBSGGGHHHHHHHHHHTCC
T ss_pred cccCCHHHHHHHHHHHHHHhCCeEEEECCcHHHHHHHHHHHHCCCC
Confidence 66667765 35666667899999888752 45544333333
No 149
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=89.87 E-value=2.6 Score=38.33 Aligned_cols=109 Identities=8% Similarity=-0.078 Sum_probs=64.8
Q ss_pred HHHHHHHHHHCCCCEEEEccCcccccCCCHHHH--------HHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHH-H
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEH--------IMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGF-A 148 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr--------~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~-~ 148 (356)
.+.+++.+-+.||+..++.++..-+.....++. ..+.+. ++...++...++.+--...+++++..+++. +
T Consensus 37 ~~~~l~~m~~~GV~~~v~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~-~~~~p~r~~~~~~~p~~~~~~~~~el~~~~~~ 115 (307)
T 2f6k_A 37 PQLTLNFMRDNDISYSILSLSSPHVNFGDKAETIRLVEAANDDGKSL-AQQYPDQLGYLASLPIPYELDAVKTVQQALDQ 115 (307)
T ss_dssp HHHHHHHHHHTTEEEEEEECCSSCSCSSCHHHHHHHHHHHHHHHHHH-HHHCTTTEEEEECCCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccccCCHHHHHHHHHHHHHHHHHH-HHhCccceeEEEeCCCCCHHHHHHHHHHHHhc
Confidence 455666677899999877776432222233222 223332 333445654444443345677888877765 5
Q ss_pred cCCCEEEEcCCCCC-CCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018443 149 VGMHAALHINPYYG-KTSLEGLISHFDSVLSM-GPTIIYNV 187 (356)
Q Consensus 149 ~Gadavlv~pP~y~-~~s~~~l~~y~~~va~~-~PiilYn~ 187 (356)
.|+.||.+.+.+.. .++++.+...|+...+. +||+++--
T Consensus 116 ~g~~gi~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~ 156 (307)
T 2f6k_A 116 DGALGVTVPTNSRGLYFGSPVLERVYQELDARQAIVALHPN 156 (307)
T ss_dssp SCCSEEEEESEETTEETTCGGGHHHHHHHHTTTCEEEEECC
T ss_pred cCCcEEEEeccCCCCCCCcHhHHHHHHHHHHcCCeEEECCC
Confidence 79999966544322 34456677777777665 79998764
No 150
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=89.80 E-value=2.1 Score=41.27 Aligned_cols=123 Identities=13% Similarity=0.069 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHCCCCEEEEccCccc----c-----------cCCCHHHHHH----HHHHHHHHhCCCcEEEEecC----
Q 018443 76 EAYDDLVNMQIVNGAEGMIVGGTTGE----G-----------QLMSWDEHIM----LIGHTVNCFGASVKVIGNTG---- 132 (356)
Q Consensus 76 ~~l~~~v~~li~~Gv~Gl~v~GstGE----~-----------~~Lt~eEr~~----li~~~~~~~~grvpVi~gvg---- 132 (356)
+.+.+-.+...++|.|||=+.+..|- | +-=|.+.|.+ +++.+.+.++.+ ||.+=++
T Consensus 167 ~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~V~vrls~~~~ 245 (376)
T 1icp_A 167 NEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSD-RVGIRISPFAH 245 (376)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-GEEEEECTTCC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCC-ceEEEeccccc
Confidence 46667777888899999988886542 1 1123567744 455556666545 7766443
Q ss_pred ------CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCH-HHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHH
Q 018443 133 ------SNSTREAIHATEQGFAVGMHAALHINPYYGKTSL-EGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTM 203 (356)
Q Consensus 133 ------~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~-~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~L 203 (356)
..+.++++++++..++.|+|.+-+..+.+..... ..-..+.+.|.+. .||+. + | .++++..+++
T Consensus 246 ~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~iPvi~-~-----G-~i~~~~a~~~ 318 (376)
T 1icp_A 246 YNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGTFIV-A-----G-GYDREDGNRA 318 (376)
T ss_dssp TTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCCSCEEE-E-----S-SCCHHHHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcCCCEEE-e-----C-CCCHHHHHHH
Confidence 2356789999999999999999988765432111 0111233444444 46554 2 2 2378877777
Q ss_pred hcC
Q 018443 204 AQS 206 (356)
Q Consensus 204 a~~ 206 (356)
.+.
T Consensus 319 l~~ 321 (376)
T 1icp_A 319 LIE 321 (376)
T ss_dssp HHT
T ss_pred HHC
Confidence 643
No 151
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=89.77 E-value=8.4 Score=33.99 Aligned_cols=129 Identities=8% Similarity=-0.004 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHCCCCEEEEccCc-------cc--ccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHH
Q 018443 77 AYDDLVNMQIVNGAEGMIVGGTT-------GE--GQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGF 147 (356)
Q Consensus 77 ~l~~~v~~li~~Gv~Gl~v~Gst-------GE--~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~ 147 (356)
.+...++...+.|.++|=+.... |. ...++.++..++-+.+. ..+=++..+......+.++..+.++.|+
T Consensus 23 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gl~i~~~~~~~~~~~~~~~~~i~~A~ 101 (262)
T 3p6l_A 23 PLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAA-SKGIKIVGTGVYVAEKSSDWEKMFKFAK 101 (262)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHH-HTTCEEEEEEEECCSSTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHH-HcCCeEEEEeccCCccHHHHHHHHHHHH
Confidence 37778888889999999766532 22 24567777777665444 3332333332223345667778888899
Q ss_pred HcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEEEee
Q 018443 148 AVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKE 214 (356)
Q Consensus 148 ~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~--~pnivGiK~ 214 (356)
++|++.+.+.|. .+. .+...++++. +.+.+-|.|..+ ..-+++.+.++.+ .||+.-.=|
T Consensus 102 ~lGa~~v~~~~~------~~~-~~~l~~~a~~~gv~l~~En~~~~~-~~~~~~~~~~ll~~~~~~~g~~~D 164 (262)
T 3p6l_A 102 AMDLEFITCEPA------LSD-WDLVEKLSKQYNIKISVHNHPQPS-DYWKPENLLKAISGRSQSLGSCSD 164 (262)
T ss_dssp HTTCSEEEECCC------GGG-HHHHHHHHHHHTCEEEEECCSSSS-SSSSHHHHHHHHTTSCTTEEEEEE
T ss_pred HcCCCEEEecCC------HHH-HHHHHHHHHHhCCEEEEEeCCCcc-ccCCHHHHHHHHHhCCCceEEEec
Confidence 999999988643 222 2333344443 578888887532 2237888888874 577643333
No 152
>3nwr_A A rubisco-like protein; lyase; HET: KCX; 1.50A {Burkholderia fungorum}
Probab=89.72 E-value=4.1 Score=40.08 Aligned_cols=95 Identities=15% Similarity=0.055 Sum_probs=72.2
Q ss_pred eeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHH----hCCCcEEEEecCCC
Q 018443 59 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNC----FGASVKVIGNTGSN 134 (356)
Q Consensus 59 vi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~----~~grvpVi~gvg~~ 134 (356)
++-.++-| .--+.-+.+.+.+-.+...|+|=+====.-+....+.++||...+..+++. ++.+.-..++++ .
T Consensus 163 l~gtiiKP---klGLs~~~~a~~~ye~~~GGlDfiKDDE~~~~q~f~p~~eRv~~v~eai~rA~~eTGe~k~y~~NiT-~ 238 (432)
T 3nwr_A 163 MIGTIIKP---NVGLSAAETAALVRELCEAGVDFIKDDEVCANPAHAPLAERVRAVMSEVRRYRERSGRPVMVAFNIT-D 238 (432)
T ss_dssp EEEEECSS---SSCCCHHHHHHHHHHHHHHTCSEEECCTTCSSCTTSCHHHHHHHHHHHHHHHHHHHSCCCEEEEECC-S
T ss_pred eEEEeecc---ccCCCHHHHHHHHHHHHhcCCceeECCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCcceEEeecC-C
Confidence 55555544 444899999999999999999976322244567778999998877666553 444444577999 6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEc
Q 018443 135 STREAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 135 st~~ai~lar~a~~~Gadavlv~ 157 (356)
+++|.+++++.+.+.|++++|+-
T Consensus 239 ~~~em~~Ra~~a~e~G~~~~mvd 261 (432)
T 3nwr_A 239 DLDAMRRHAELVEREGGSCVMAS 261 (432)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEe
Confidence 89999999999999999999875
No 153
>4f0h_A Ribulose bisphosphate carboxylase large chain; alpha beta domain, catalytic domain TIM barrel, carboxylase/oxygenase, nitrosylation; 1.96A {Galdieria sulphuraria} PDB: 4f0k_A 4f0m_A 1bwv_A* 1iwa_A 1bxn_A
Probab=89.69 E-value=3.6 Score=41.11 Aligned_cols=96 Identities=15% Similarity=0.153 Sum_probs=73.4
Q ss_pred eeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHH----hCCCcEEEEecCCC
Q 018443 59 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNC----FGASVKVIGNTGSN 134 (356)
Q Consensus 59 vi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~----~~grvpVi~gvg~~ 134 (356)
++-.++ ++.--+.-+.+.+.+-.+...|+|=+====.-+....+.++||...+..+++. ++.+.-..+++++.
T Consensus 178 llgtii---KPklGLs~~~~a~~~ye~~~GGlDfIKDDE~l~~Qpf~p~~eRv~~v~eai~rA~~eTGe~K~~~~NiTa~ 254 (493)
T 4f0h_A 178 LLGXTT---KPKLGLSGKNYGRVVYEALKGGLDFVKDDENINSQPFMRWRERYLFVMEAVNKAAAATGEVKGHYLNVTAA 254 (493)
T ss_dssp EEEEBC---SSSSCCCHHHHHHHHHHHHHHTCSEEECCTTCSSBTTBCHHHHHHHHHHHHHHHHHHHSSCCEEEEECCCS
T ss_pred eEEEee---ccccCCCHHHHHHHHHHHHhcCCCccccccccCCCCCccHHHHHHHHHHHHHHHHHhHCCcceEEeecCCC
Confidence 444444 44445899999999999999999976321234567788999999887777654 33344467899988
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEc
Q 018443 135 STREAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 135 st~~ai~lar~a~~~Gadavlv~ 157 (356)
+.+|.+++++.+.+.|+.++|+-
T Consensus 255 ~~~eM~~Ra~~a~e~G~~~vmvd 277 (493)
T 4f0h_A 255 TMEEMYARAQLAKELGSVIIMID 277 (493)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CHHHHHHHHHHHHhcCCCeEEEe
Confidence 89999999999999999999875
No 154
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=89.66 E-value=0.99 Score=43.40 Aligned_cols=66 Identities=12% Similarity=0.124 Sum_probs=47.6
Q ss_pred HHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEE
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALH 156 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv 156 (356)
.+.++.+++.|++.|.+..+.|.. +.-.+.++.+.+.. ++||++|... +.+.++.+.++|+|++.+
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~-----~~~~~~i~~i~~~~--~~~Vivg~v~-----t~e~A~~l~~aGaD~I~V 172 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHS-----LNIIRTLKEIKSKM--NIDVIVGNVV-----TEEATKELIENGADGIKV 172 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSB-----HHHHHHHHHHHHHC--CCEEEEEEEC-----SHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCc-----HHHHHHHHHHHHhc--CCcEEEccCC-----CHHHHHHHHHcCcCEEEE
Confidence 567888889999999887666542 44456666666655 6899984322 245578888999999998
No 155
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=89.53 E-value=2.7 Score=38.66 Aligned_cols=19 Identities=11% Similarity=0.391 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHCCCCEEEE
Q 018443 77 AYDDLVNMQIVNGAEGMIV 95 (356)
Q Consensus 77 ~l~~~v~~li~~Gv~Gl~v 95 (356)
++++.++.+.++|++|+++
T Consensus 111 g~e~f~~~~~~aGvdgvii 129 (267)
T 3vnd_A 111 GIDEFYTKAQAAGVDSVLI 129 (267)
T ss_dssp CHHHHHHHHHHHTCCEEEE
T ss_pred hHHHHHHHHHHcCCCEEEe
Confidence 3466666666666666655
No 156
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=89.39 E-value=15 Score=35.08 Aligned_cols=169 Identities=12% Similarity=0.025 Sum_probs=92.2
Q ss_pred eEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHH
Q 018443 60 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREA 139 (356)
Q Consensus 60 i~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~a 139 (356)
+|.+..|++..++ .++...+.+.| |+.+..+ .+|.||..+.++. ++ ..+.+.++. ..++
T Consensus 43 ~Pii~ApM~~vte------~~lA~A~a~~G--g~gvi~~-----~~s~ee~~~~i~~----~~--~~~~~~~g~--~~~~ 101 (361)
T 3r2g_A 43 LPVISANMDTITE------SNMANFMHSKG--AMGALHR-----FMTIEENIQEFKK----CK--GPVFVSVGC--TENE 101 (361)
T ss_dssp SCEEECCSTTTCS------HHHHHHHHHTT--CEEBCCS-----CSCHHHHHHHHHT----CC--SCCBEEECS--SHHH
T ss_pred CCEEECCCCCchH------HHHHHHHHHcC--CCEEEeC-----CCCHHHHHHHHhh----cc--eEEEEEcCC--CHHH
Confidence 4556667754433 45556666777 4444443 2788887665432 22 233333433 3678
Q ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc---CCeEEEeCCCCCCCCCCHHHHHHHhcCCCEEEEeecC
Q 018443 140 IHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM---GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKECV 216 (356)
Q Consensus 140 i~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~---~PiilYn~P~~tG~~ls~~~l~~La~~pnivGiK~s~ 216 (356)
.++++.+.++|+|.+.+-.+.-. + +.+.+..+.+.+. .||+.=| ..+++...++.+. .+-+||.+.
T Consensus 102 ~e~~~~a~~aGvdvI~id~a~G~--~-~~~~e~I~~ir~~~~~~~Vi~G~-------V~T~e~A~~a~~a-GaD~I~Vg~ 170 (361)
T 3r2g_A 102 LQRAEALRDAGADFFCVDVAHAH--A-KYVGKTLKSLRQLLGSRCIMAGN-------VATYAGADYLASC-GADIIKAGI 170 (361)
T ss_dssp HHHHHHHHHTTCCEEEEECSCCS--S-HHHHHHHHHHHHHHTTCEEEEEE-------ECSHHHHHHHHHT-TCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCC--c-HhHHHHHHHHHHhcCCCeEEEcC-------cCCHHHHHHHHHc-CCCEEEEcC
Confidence 89999999999998777433311 2 3344455555543 5777644 3577877777653 344555432
Q ss_pred ch--------------hh---HhhhhCCCeEEEe--cCc--chhHhHHHHcCCceeecccccccHH
Q 018443 217 GN--------------DR---VEHYTGNGIVVWS--GND--DQCHDARWNHGATGVISVTSNLVPG 261 (356)
Q Consensus 217 ~d--------------~~---i~~~~~~~~~v~~--G~d--~~~l~~~l~~Ga~G~is~~~n~~P~ 261 (356)
+. +. +.+.....-.|+. |-. ..+. .++.+|++++..|...+.++
T Consensus 171 g~G~~~~tr~~~g~g~p~l~aI~~~~~~~~PVIAdGGI~~~~di~-kALa~GAd~V~iGr~f~~t~ 235 (361)
T 3r2g_A 171 GGGSVCSTRIKTGFGVPMLTCIQDCSRADRSIVADGGIKTSGDIV-KALAFGADFVMIGGMLAGSA 235 (361)
T ss_dssp SSSSCHHHHHHHCCCCCHHHHHHHHTTSSSEEEEESCCCSHHHHH-HHHHTTCSEEEESGGGTTBT
T ss_pred CCCcCccccccCCccHHHHHHHHHHHHhCCCEEEECCCCCHHHHH-HHHHcCCCEEEEChHHhCCc
Confidence 21 01 1111111003442 321 2233 45889999999887765443
No 157
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=89.31 E-value=2.3 Score=39.04 Aligned_cols=107 Identities=12% Similarity=0.039 Sum_probs=66.3
Q ss_pred HHHHHHHHHCCCCEEEEccCc-ccccCCCHHH--------HHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHH-HH
Q 018443 79 DDLVNMQIVNGAEGMIVGGTT-GEGQLMSWDE--------HIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQG-FA 148 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~Gst-GE~~~Lt~eE--------r~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a-~~ 148 (356)
+.+++.+-+.||+..++.+++ |-...-+.++ -..+.+. ++...+|.--++++.-...+++++..+++ ++
T Consensus 41 ~~~l~~m~~~GV~~~v~~~~~p~~~~~~d~~~~~~~~~~~n~~~~~~-~~~~p~r~~~~~~v~p~~~~~~~~el~~~~~~ 119 (327)
T 2dvt_A 41 DTRLKLMDAHGIETMILSLNAPAVQAIPDRRKAIEIARRANDVLAEE-CAKRPDRFLAFAALPLQDPDAATEELQRCVND 119 (327)
T ss_dssp SHHHHHHHHTTEEEEEEEECSSGGGGCCCHHHHHHHHHHHHHHHHHH-HHHCTTTEEEEECCCTTSHHHHHHHHHHHHHT
T ss_pred HHHHHHhhhcCCcEEEEeCCCCcccccCChHHHHHHHHHHHHHHHHH-HhhCCCceEEEeecCcCCHHHHHHHHHHHHhc
Confidence 567777788999998877654 2211123222 2233333 33345565445666655667788877777 46
Q ss_pred cCCCEEEEcCCCC------C-CCCHHHHHHHHHHHHhc-CCeEEEe
Q 018443 149 VGMHAALHINPYY------G-KTSLEGLISHFDSVLSM-GPTIIYN 186 (356)
Q Consensus 149 ~Gadavlv~pP~y------~-~~s~~~l~~y~~~va~~-~PiilYn 186 (356)
.|+.||-+.+.++ . ..+++.+...|+...+. +||+++-
T Consensus 120 ~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~ 165 (327)
T 2dvt_A 120 LGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDVPFYLHP 165 (327)
T ss_dssp TCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHHTCCEEEEC
T ss_pred CCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHcCCeEEECC
Confidence 7999997654433 1 24556677777777765 7999985
No 158
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=89.18 E-value=7.8 Score=35.14 Aligned_cols=111 Identities=11% Similarity=0.147 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCC-CCHHHHHHHHHHHHHcCCCEEE
Q 018443 77 AYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGS-NSTREAIHATEQGFAVGMHAAL 155 (356)
Q Consensus 77 ~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~-~st~~ai~lar~a~~~Gadavl 155 (356)
++++.++.+.+.|++|+++. -++.+|-.++++.+.++ .+.++.-+.. .+.+...+.++.+ .|...++
T Consensus 110 g~~~f~~~~~~aG~dgvii~-------dl~~ee~~~~~~~~~~~---gl~~i~l~~p~t~~~rl~~ia~~a--~gfiy~v 177 (262)
T 2ekc_A 110 GLEKFCRLSREKGIDGFIVP-------DLPPEEAEELKAVMKKY---VLSFVPLGAPTSTRKRIKLICEAA--DEMTYFV 177 (262)
T ss_dssp CHHHHHHHHHHTTCCEEECT-------TCCHHHHHHHHHHHHHT---TCEECCEECTTCCHHHHHHHHHHC--SSCEEEE
T ss_pred hHHHHHHHHHHcCCCEEEEC-------CCCHHHHHHHHHHHHHc---CCcEEEEeCCCCCHHHHHHHHHhC--CCCEEEE
Confidence 44677777778888888774 34456666666555442 1222211122 2223333333332 2332222
Q ss_pred EcCCCCCCCC--H-HHHHHHHHHHHhc--CCeEEEeCCCCCCCCCC-HHHHHHHhcC
Q 018443 156 HINPYYGKTS--L-EGLISHFDSVLSM--GPTIIYNVPSRTGQDIP-PRVIHTMAQS 206 (356)
Q Consensus 156 v~pP~y~~~s--~-~~l~~y~~~va~~--~PiilYn~P~~tG~~ls-~~~l~~La~~ 206 (356)
......+..+ . +.+.++.+.+.+. .|+++ |..++ ++.+.++...
T Consensus 178 s~~g~TG~~~~~~~~~~~~~v~~vr~~~~~pv~v-------G~GI~t~e~~~~~~~g 227 (262)
T 2ekc_A 178 SVTGTTGAREKLPYERIKKKVEEYRELCDKPVVV-------GFGVSKKEHAREIGSF 227 (262)
T ss_dssp SSCC---------CHHHHHHHHHHHHHCCSCEEE-------ESSCCSHHHHHHHHTT
T ss_pred ecCCccCCCCCcCcccHHHHHHHHHhhcCCCEEE-------eCCCCCHHHHHHHHcC
Confidence 1111222211 1 3355566666553 46544 55565 7777776544
No 159
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=89.10 E-value=2 Score=39.67 Aligned_cols=75 Identities=15% Similarity=0.158 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCH--------HHHHHHHHHHHH
Q 018443 77 AYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNST--------REAIHATEQGFA 148 (356)
Q Consensus 77 ~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st--------~~ai~lar~a~~ 148 (356)
.++++++++-+.|.+.|=+.-.|- .|+.++|.++++.+.+ ...|+.-+|..+. .+-|++++..-+
T Consensus 111 ~~~~yl~~~k~lGF~~IEISdGti---~l~~~~~~~lI~~a~~----~f~Vl~EvG~K~~~~~~~~~~~~~I~~~~~dLe 183 (276)
T 1u83_A 111 KVNEFHRYCTYFGCEYIEISNGTL---PMTNKEKAAYIADFSD----EFLVLSEVGSKDAELASRQSSEEWLEYIVEDME 183 (276)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSSS---CCCHHHHHHHHHHHTT----TSEEEEECSCCC------CCSTHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEECCCcc---cCCHHHHHHHHHHHHh----hcEEeeeccccCccccCCCCHHHHHHHHHHHHH
Confidence 678888888899999986655544 3899999999985543 3778887776544 788999999999
Q ss_pred cCCCEEEEcC
Q 018443 149 VGMHAALHIN 158 (356)
Q Consensus 149 ~Gadavlv~p 158 (356)
+||+.|++-.
T Consensus 184 AGA~~ViiEa 193 (276)
T 1u83_A 184 AGAEKVITEA 193 (276)
T ss_dssp HTEEEEEEC-
T ss_pred CCCcEEEEee
Confidence 9999999865
No 160
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=89.08 E-value=13 Score=33.79 Aligned_cols=176 Identities=11% Similarity=0.104 Sum_probs=99.7
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCc----ccccCCCHHHH---------HHHHHHHHHHhCCCcEEEEecC
Q 018443 66 PYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTT----GEGQLMSWDEH---------IMLIGHTVNCFGASVKVIGNTG 132 (356)
Q Consensus 66 Pf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~Gst----GE~~~Lt~eEr---------~~li~~~~~~~~grvpVi~gvg 132 (356)
||---|.-|.+...+.++.|.++|+|-|=++=-. .+++..-..-. ..+++.+.+ +..++|++.=+.
T Consensus 18 ~yitaG~P~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~-~r~~~Pivlm~Y 96 (252)
T 3tha_A 18 AYTVLGYPNLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLAR-IKTKKALVFMVY 96 (252)
T ss_dssp EEEETTSSCHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHH-CCCSSEEEEECC
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHH-HhcCCCEEEEec
Confidence 4444688999999999999999999987543222 22222111111 344544433 334589877655
Q ss_pred CCCHHH--HHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHhcC-CC
Q 018443 133 SNSTRE--AIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMAQS-PN 208 (356)
Q Consensus 133 ~~st~~--ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~P~~tG~~ls~~~l~~La~~-pn 208 (356)
.|.... .=++++.++++|+|++++.. . ..|+...|.+...+. +..+..=.|. -+.+.++++++. +.
T Consensus 97 ~N~i~~~G~e~F~~~~~~aGvdG~IipD--L---P~eE~~~~~~~~~~~Gl~~I~lvaP~-----t~~eRi~~ia~~a~g 166 (252)
T 3tha_A 97 YNLIFSYGLEKFVKKAKSLGICALIVPE--L---SFEESDDLIKECERYNIALITLVSVT-----TPKERVKKLVKHAKG 166 (252)
T ss_dssp HHHHHHHCHHHHHHHHHHTTEEEEECTT--C---CGGGCHHHHHHHHHTTCEECEEEETT-----SCHHHHHHHHTTCCS
T ss_pred cCHHHHhhHHHHHHHHHHcCCCEEEeCC--C---CHHHHHHHHHHHHHcCCeEEEEeCCC-----CcHHHHHHHHHhCCC
Confidence 554433 34588999999999998743 2 234544444444333 3333333342 346889999864 56
Q ss_pred EEEEeec---Cch-----h-------hHhhhhCCCeEEEecCc----chhHhHHHHcCCceeecccc
Q 018443 209 LAGVKEC---VGN-----D-------RVEHYTGNGIVVWSGND----DQCHDARWNHGATGVISVTS 256 (356)
Q Consensus 209 ivGiK~s---~~d-----~-------~i~~~~~~~~~v~~G~d----~~~l~~~l~~Ga~G~is~~~ 256 (356)
++..=-. +|. . ++++. .+.-+..|.. +.+ .. +..++||+|.|++
T Consensus 167 FiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~--~~~Pv~vGfGIst~e~a-~~-~~~~ADGVIVGSA 229 (252)
T 3tha_A 167 FIYLLASIGITGTKSVEEAILQDKVKEIRSF--TNLPIFVGFGIQNNQDV-KR-MRKVADGVIVGTS 229 (252)
T ss_dssp CEEEECCSCSSSCSHHHHHHHHHHHHHHHTT--CCSCEEEESSCCSHHHH-HH-HTTTSSEEEECHH
T ss_pred eEEEEecCCCCCcccCCCHHHHHHHHHHHHh--cCCcEEEEcCcCCHHHH-HH-HHhcCCEEEECHH
Confidence 7666321 121 1 12222 2344554442 222 22 4568999998864
No 161
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=89.07 E-value=2.1 Score=42.76 Aligned_cols=68 Identities=19% Similarity=0.210 Sum_probs=49.0
Q ss_pred HHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEE
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALH 156 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv 156 (356)
..+.++.++++|++.+.+..+.|. .+.-.+.++.+.+..+ .+||++|-.. + .+.++.+.++|||++.+
T Consensus 230 ~~~~a~~l~~aG~d~I~id~a~g~-----~~~~~~~v~~i~~~~p-~~~Vi~g~v~-t----~e~a~~l~~aGaD~I~v 297 (490)
T 4avf_A 230 TGERVAALVAAGVDVVVVDTAHGH-----SKGVIERVRWVKQTFP-DVQVIGGNIA-T----AEAAKALAEAGADAVKV 297 (490)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCCS-----BHHHHHHHHHHHHHCT-TSEEEEEEEC-S----HHHHHHHHHTTCSEEEE
T ss_pred hHHHHHHHhhcccceEEecccCCc-----chhHHHHHHHHHHHCC-CceEEEeeeC-c----HHHHHHHHHcCCCEEEE
Confidence 355677888999999988877764 2344566766766653 5799987322 2 25578899999999998
No 162
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=89.07 E-value=0.84 Score=43.26 Aligned_cols=61 Identities=21% Similarity=0.255 Sum_probs=36.0
Q ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHH
Q 018443 139 AIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHT 202 (356)
Q Consensus 139 ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~~PiilYn~P~~tG~~ls~~~l~~ 202 (356)
..+.++.|++.|.. +...+|+..+.+.+.+.+..+++.+..+- .-+++...|. .+|..+.+
T Consensus 124 ~~~~v~~a~~~g~~-v~f~~~d~~~~~~~~~~~~~~~~~~~G~~-~i~l~DT~G~-~~P~~v~~ 184 (325)
T 3eeg_A 124 AVAAVKQAKKVVHE-VEFFCEDAGRADQAFLARMVEAVIEAGAD-VVNIPDTTGY-MLPWQYGE 184 (325)
T ss_dssp THHHHHHHHTTSSE-EEEEEETGGGSCHHHHHHHHHHHHHHTCS-EEECCBSSSC-CCHHHHHH
T ss_pred HHHHHHHHHHCCCE-EEEEccccccchHHHHHHHHHHHHhcCCC-EEEecCccCC-cCHHHHHH
Confidence 34555667777764 44566666677777777777777766332 2344556676 44443333
No 163
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=89.03 E-value=1.6 Score=40.79 Aligned_cols=97 Identities=18% Similarity=0.167 Sum_probs=54.1
Q ss_pred ccCceeEeeecccCCCCC-CCHHHHHHHHHHHHHCCCCEEEEcc-Ccccc-cCCC-HHHHHHHHHHHHHHhCCCcEEEEe
Q 018443 55 KALRLITAIKTPYLPDGR-FDLEAYDDLVNMQIVNGAEGMIVGG-TTGEG-QLMS-WDEHIMLIGHTVNCFGASVKVIGN 130 (356)
Q Consensus 55 ~~~Gvi~al~TPf~~dg~-ID~~~l~~~v~~li~~Gv~Gl~v~G-stGE~-~~Lt-~eEr~~li~~~~~~~~grvpVi~g 130 (356)
...||+-..+=-|.+.|+ .|.+...++++.+++.|++-|=|+| ||.-+ ...+ .||..+++..+......++||.+=
T Consensus 24 ~iMgilNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~vpiSID 103 (294)
T 2y5s_A 24 LVMGILNATPDSFSDGGRFLARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNVPLSID 103 (294)
T ss_dssp EEEEEEECCC----------CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCSCEEEE
T ss_pred eEEEEEeCCCCCCCCCCCcCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEEE
Confidence 356766543333887775 5899999999999999999999998 55332 3344 555666665444433335666554
Q ss_pred cCCCCHHHHHHHHHHHHHcCCCEEEEc
Q 018443 131 TGSNSTREAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 131 vg~~st~~ai~lar~a~~~Gadavlv~ 157 (356)
+.. . +-++.|-++|++-|--+
T Consensus 104 T~~--~----~Va~aAl~aGa~iINdV 124 (294)
T 2y5s_A 104 TYK--P----AVMRAALAAGADLINDI 124 (294)
T ss_dssp CCC--H----HHHHHHHHHTCSEEEET
T ss_pred CCC--H----HHHHHHHHcCCCEEEEC
Confidence 433 2 22333444477655444
No 164
>3qfw_A Ribulose-1,5-bisphosphate carboxylase/oxygenase L subunit; structural genomics, PSI-2, protein structure initiative; 1.79A {Rhodopseudomonas palustris}
Probab=89.02 E-value=4.1 Score=39.41 Aligned_cols=156 Identities=14% Similarity=0.187 Sum_probs=98.0
Q ss_pred cccccCCCCCCCCcchh--cccCCccc----cc-cCc-eeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcc
Q 018443 29 QAAIIPNYHLPMRSFEV--KNRTSAED----IK-ALR-LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTG 100 (356)
Q Consensus 29 ~~~~~~~~~~~~~~~~~--~~~~~~~~----~~-~~G-vi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstG 100 (356)
.+...-|+.+|-....- --+++.+. +. ..+ ++-.++-| - | +.-+.+.+.+-.+...|+|=+====.-+
T Consensus 95 ~~lrL~D~~~P~~~~~~f~GP~~Gi~g~R~~l~~~~RPllgtiiKP-l--G-Ls~~~~a~~~ye~~~GGlDfiKDDE~l~ 170 (378)
T 3qfw_A 95 PDIALADVELPAHYLTAFGGPRVGLAGIRTLTGAQSRALTASALKP-Q--G-LSPAALASIAHQLALGGVDLIKDDHGLA 170 (378)
T ss_dssp TTEEBCCCBCCHHHHHHHCCCSSHHHHHHHHHTCSSSCEEEEEECC-T--T-SCHHHHHHHHHHHHHTTCSEEEECTTCS
T ss_pred cceEEEEecCCHHHHhcCCCCCCchHHHHHHhCCCCCceeeeeccC-C--c-CCHHHHHHHHHHHHhcCCCcccCCcCcC
Confidence 45667777777655421 00122211 11 222 77777888 3 4 8999999999999999999763222345
Q ss_pred cccCCCHHHHHHHHHHHHHH----hCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHH
Q 018443 101 EGQLMSWDEHIMLIGHTVNC----FGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSV 176 (356)
Q Consensus 101 E~~~Lt~eEr~~li~~~~~~----~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~v 176 (356)
....+.++||...+..+++. ++.+.-..+++++ +.+|.+++++.|++.|+.++|+-+ +... ..-.+.+
T Consensus 171 ~qpf~p~~eR~~~~~eai~ra~~eTGe~k~y~~NiTa-~~~em~~ra~~a~e~G~~~~mvd~-~~~G------~~a~~~l 242 (378)
T 3qfw_A 171 DQAFSPFAERAAAVGKAVREANAARGGRTLYAPNISG-TLDDMRRQLGVIRDEGIGAVLVAP-MIVG------VSNFHAI 242 (378)
T ss_dssp SCTTSCHHHHHHHHHHHHHHHHHHHTCCCEEECBCCS-SHHHHHHHHHHHHHHTCCEEEECH-HHHC------HHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHHHHhhCCccEEEeecCC-CHHHHHHHHHHHHHcCCCEEEEec-cccC------HHHHHHH
Confidence 67788999998876665543 3434334668887 699999999999999999999852 1111 1223444
Q ss_pred HhcC-CeEEEeCCCCCC-CCCC
Q 018443 177 LSMG-PTIIYNVPSRTG-QDIP 196 (356)
Q Consensus 177 a~~~-PiilYn~P~~tG-~~ls 196 (356)
++.. .+.|.-.+...| ..++
T Consensus 243 ~r~~p~~~lh~HrA~~gahGi~ 264 (378)
T 3qfw_A 243 VKEAAGLVVVAHPAMAGAAKIA 264 (378)
T ss_dssp HTTCTTCEEEECCTTC---CBC
T ss_pred HHhCCCCEEEeCcCchhhccCc
Confidence 4545 455554455444 3465
No 165
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=88.97 E-value=2.8 Score=38.77 Aligned_cols=101 Identities=12% Similarity=0.014 Sum_probs=69.5
Q ss_pred CCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC---------CCCCCCCHHHHHHHHHHHHhcC--CeEEEeCCCCC
Q 018443 123 ASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN---------PYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRT 191 (356)
Q Consensus 123 grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~p---------P~y~~~s~~~l~~y~~~va~~~--PiilYn~P~~t 191 (356)
++.-++.++-.. -.|+.++++|+|++++-. |.....|-++++.|-++|++.. +.++=|.|. -
T Consensus 28 g~~i~m~tayDa------~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pf-g 100 (275)
T 3vav_A 28 GEKIAMLTCYDA------SFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPF-G 100 (275)
T ss_dssp TCCEEEEECCSH------HHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCT-T
T ss_pred CCcEEEEeCcCH------HHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCC-C
Confidence 443455566543 346778899999998763 2334568899999999999974 568899994 2
Q ss_pred CCCCCHHHH----HHHhcCCCEEEEeecCch---hhHhhhhCCCeEEE
Q 018443 192 GQDIPPRVI----HTMAQSPNLAGVKECVGN---DRVEHYTGNGIVVW 232 (356)
Q Consensus 192 G~~ls~~~l----~~La~~pnivGiK~s~~d---~~i~~~~~~~~~v~ 232 (356)
++ -+++.. .+|.+. ++.|||.+.+. +.++++...++.|+
T Consensus 101 sY-~s~~~a~~~a~rl~ka-Ga~aVklEdg~~~~~~i~~l~~~GIpv~ 146 (275)
T 3vav_A 101 TY-GTPADAFASAVKLMRA-GAQMVKFEGGEWLAETVRFLVERAVPVC 146 (275)
T ss_dssp SC-SSHHHHHHHHHHHHHT-TCSEEEEECCGGGHHHHHHHHHTTCCEE
T ss_pred CC-CCHHHHHHHHHHHHHc-CCCEEEECCchhHHHHHHHHHHCCCCEE
Confidence 46 676554 456665 89999988775 24555555555553
No 166
>2d69_A Ribulose bisphosphate carboxylase; alpha/beta barrel, structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.90A {Pyrococcus horikoshii} SCOP: c.1.14.1 d.58.9.1 PDB: 2cxe_A 2cwx_A
Probab=88.95 E-value=4.3 Score=39.88 Aligned_cols=111 Identities=11% Similarity=0.027 Sum_probs=76.7
Q ss_pred eecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEcc-CcccccCCCHHHHHHHHHHHHH----HhCCCcEEEEecCCCCHH
Q 018443 63 IKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGG-TTGEGQLMSWDEHIMLIGHTVN----CFGASVKVIGNTGSNSTR 137 (356)
Q Consensus 63 l~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~G-stGE~~~Lt~eEr~~li~~~~~----~~~grvpVi~gvg~~st~ 137 (356)
+-|-+.+.--+.-+.+.+.+-.+...|+|=+= .- .-+....+.++||...+..+++ .++.+.-..+++++. .+
T Consensus 155 ~gtiiKPklGLs~~~~a~~~ye~~~GGlDfiK-DDE~l~~qpf~p~~eRv~~v~eai~ra~~eTGe~k~y~~NiTa~-~~ 232 (430)
T 2d69_A 155 TATVPKPKMGWSVEEYAEIAYELWSGGIDLLK-DDENFTSFPFNRFEERVRKLYRVRDRVEAETGETKEYLINITGP-VN 232 (430)
T ss_dssp EEECCSSSSCCCHHHHHHHHHHHHHTTCSEEE-CCTTCSCBTTBCHHHHHHHHHHHHHHHHHHHSSCCEEECBCCSS-HH
T ss_pred EEeecCCccCCCHHHHHHHHHHHHhCCCcEeE-CCCCCCCCCCccHHHHHHHHHHHHHHHHHhhCCccEEEeecCCC-HH
Confidence 34445555558999999999999999999552 22 3456677889999875555544 344444456789886 99
Q ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHH
Q 018443 138 EAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDS 175 (356)
Q Consensus 138 ~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~ 175 (356)
|.+++++.+++.|+.++|+-+-.+.-..-..+.++.+.
T Consensus 233 em~~Ra~~a~e~G~~~~mvd~~~~G~~a~~~l~~~~r~ 270 (430)
T 2d69_A 233 IMEKRAEMVANEGGQYVMIDIVVAGWSALQYMREVTED 270 (430)
T ss_dssp HHHHHHHHHHHHTCCEEEEEHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCeEEEEeeccChHHHHHHHHHhhc
Confidence 99999999999999999986322222223445554443
No 167
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=88.89 E-value=3.9 Score=38.57 Aligned_cols=123 Identities=14% Similarity=0.136 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHhCCCcEEEEecCCCC------------------------------HHHHHHHHHHHHHcCCCEEEEcC
Q 018443 109 EHIMLIGHTVNCFGASVKVIGNTGSNS------------------------------TREAIHATEQGFAVGMHAALHIN 158 (356)
Q Consensus 109 Er~~li~~~~~~~~grvpVi~gvg~~s------------------------------t~~ai~lar~a~~~Gadavlv~p 158 (356)
...+.++.+.+..++++|+|..+++.= ++-.++.++...++|+|++++..
T Consensus 132 ~v~eai~~l~~~l~~~~pligf~g~P~Tla~~l~~~~~~~~~~~~~pe~~~~ll~~i~~~~~~~~~~qi~aGad~i~i~D 211 (348)
T 4ay7_A 132 VVLEAIKIIREKVGPDVPIVGGMEGPVTVASDLVSVKSFMKWSIKKTDLLEQALDIATEASIIYANAMVEAGADVIAIAD 211 (348)
T ss_dssp HHHHHHHHHHHHHCTTSCEEEEEECHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHHHHhCCCeeEEEeccchHHHHHhcccchHHHHHHHHChHhHHHHHHHHHHHHHHHHHHHHhcCCCcceeec
Confidence 344556666677778888888777541 44456667777789999999987
Q ss_pred CCCCC--CCHHHH----HHHHHHHHhcC-CeEEEeCCCCCCCCCCHHHHHHHhcC-CCEEEEeecCchh-hHhhhhCCCe
Q 018443 159 PYYGK--TSLEGL----ISHFDSVLSMG-PTIIYNVPSRTGQDIPPRVIHTMAQS-PNLAGVKECVGND-RVEHYTGNGI 229 (356)
Q Consensus 159 P~y~~--~s~~~l----~~y~~~va~~~-PiilYn~P~~tG~~ls~~~l~~La~~-pnivGiK~s~~d~-~i~~~~~~~~ 229 (356)
+.-.. .|++.. ..|+++|.+.. .+.++++.+. ....+..+++. .+++++=....+. ..++..++++
T Consensus 212 ~~a~~~~lsp~~f~~f~~p~~k~i~~~~~~~~iih~~g~-----~~~~l~~~~~~g~d~i~~d~~~~~~~~~k~~~g~~~ 286 (348)
T 4ay7_A 212 PVASPDLMSPDSFRQFLKSRLQKFASSVNSVTVLHICGN-----VNPILSDMADCGFEGLSVEEKIGSAKKGKEVIGTRA 286 (348)
T ss_dssp GGGSTTTSCHHHHHHHHHHHHHHHHHHSSSEEEEECCSC-----CHHHHHHHHTSCCSEEECCGGGCCHHHHHHHHTTSS
T ss_pred cccccccCCHHHHHHHhhHHHHHHHhhccCCcEEEecCC-----cHHHHHHHHHhccccccccchhhHHHHHHHHhCCCE
Confidence 75432 566554 44567777762 3333444332 13467777775 3566664443332 3444455666
Q ss_pred EEEecCc
Q 018443 230 VVWSGND 236 (356)
Q Consensus 230 ~v~~G~d 236 (356)
.+..|-|
T Consensus 287 ~l~Gnld 293 (348)
T 4ay7_A 287 RLVGNVS 293 (348)
T ss_dssp EEEEEEC
T ss_pred EEEcCCC
Confidence 6554444
No 168
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=88.65 E-value=1.3 Score=41.36 Aligned_cols=102 Identities=16% Similarity=0.052 Sum_probs=81.2
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCC--CcEEEEecCCCCHHHHHHHHHHHH
Q 018443 70 DGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA--SVKVIGNTGSNSTREAIHATEQGF 147 (356)
Q Consensus 70 dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~g--rvpVi~gvg~~st~~ai~lar~a~ 147 (356)
.++.|.+-+.+.++.+.+.|++.|.++-|+|= +++++-.++++.+.+.+++ ++|+=++. +++.--++.-+-.|.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~---~~P~~v~~lv~~l~~~~~~~~~~~l~~H~-Hnd~Gla~AN~laA~ 219 (293)
T 3ewb_X 144 ATRSDRAFLIEAVQTAIDAGATVINIPDTVGY---TNPTEFGQLFQDLRREIKQFDDIIFASHC-HDDLGMATANALAAI 219 (293)
T ss_dssp GGGSCHHHHHHHHHHHHHTTCCEEEEECSSSC---CCHHHHHHHHHHHHHHCTTGGGSEEEEEC-BCTTSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEecCCCCC---CCHHHHHHHHHHHHHhcCCccCceEEEEe-CCCcChHHHHHHHHH
Confidence 46899999999999999999999999999996 8999999999999988865 35665554 567778899999999
Q ss_pred HcCCCEEEEcCCCCC----CCCHHHHHHHHHH
Q 018443 148 AVGMHAALHINPYYG----KTSLEGLISHFDS 175 (356)
Q Consensus 148 ~~Gadavlv~pP~y~----~~s~~~l~~y~~~ 175 (356)
++|++.+=..---++ ..+-|+++..++.
T Consensus 220 ~aGa~~vd~sv~GlGeraGN~~~E~vv~~L~~ 251 (293)
T 3ewb_X 220 ENGARRVEGTINGIGERAGNTALEEVAVALHI 251 (293)
T ss_dssp HTTCCEEEEBGGGCCTTTCBCBHHHHHHHHHH
T ss_pred HhCCCEEEeeccccccccccHhHHHHHHHHHh
Confidence 999998866544332 2455666666554
No 169
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=88.62 E-value=4.8 Score=37.19 Aligned_cols=120 Identities=10% Similarity=0.090 Sum_probs=82.9
Q ss_pred cCCcccc---ccCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcc-------cccCCCHHHHHHHHHHH
Q 018443 48 RTSAEDI---KALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTG-------EGQLMSWDEHIMLIGHT 117 (356)
Q Consensus 48 ~~~~~~~---~~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstG-------E~~~Lt~eEr~~li~~~ 117 (356)
++++.++ +-.|=-..++|.+|. ...+++ -++|++.+++..|.| ..-.+|.+|-..-.+.+
T Consensus 15 ~~t~~~lr~~~~~g~~i~m~tayDa-------~sA~l~---e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV 84 (275)
T 3vav_A 15 AVTVPKLQAMREAGEKIAMLTCYDA-------SFAALL---DRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACV 84 (275)
T ss_dssp CCCHHHHHHHHHHTCCEEEEECCSH-------HHHHHH---HHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHCCCcEEEEeCcCH-------HHHHHH---HHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHH
Confidence 3455443 234444566888862 233333 368999998776665 22368899988888877
Q ss_pred HHHhCCCcEEEEecC---CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEE
Q 018443 118 VNCFGASVKVIGNTG---SNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIY 185 (356)
Q Consensus 118 ~~~~~grvpVi~gvg---~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilY 185 (356)
++.+ .+.||++-.- -.+.+++++.+++..+.||++|-+-- +.+..+..+.+.++ .|++-+
T Consensus 85 ~r~~-~~~~vvaD~pfgsY~s~~~a~~~a~rl~kaGa~aVklEd-------g~~~~~~i~~l~~~GIpv~gH 148 (275)
T 3vav_A 85 ARAQ-PRALIVADLPFGTYGTPADAFASAVKLMRAGAQMVKFEG-------GEWLAETVRFLVERAVPVCAH 148 (275)
T ss_dssp HHTC-CSSEEEEECCTTSCSSHHHHHHHHHHHHHTTCSEEEEEC-------CGGGHHHHHHHHHTTCCEEEE
T ss_pred HhcC-CCCCEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEECC-------chhHHHHHHHHHHCCCCEEEe
Confidence 7654 3689998652 25889999999999889999999864 23456666777777 688864
No 170
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=88.55 E-value=1.2 Score=42.72 Aligned_cols=85 Identities=11% Similarity=0.071 Sum_probs=58.3
Q ss_pred CCHHHHHHHHHHHHHCC-CCEEEEccCccc---------ccC---------CCH----HHHHHHHHHHHHHhCCCcEEEE
Q 018443 73 FDLEAYDDLVNMQIVNG-AEGMIVGGTTGE---------GQL---------MSW----DEHIMLIGHTVNCFGASVKVIG 129 (356)
Q Consensus 73 ID~~~l~~~v~~li~~G-v~Gl~v~GstGE---------~~~---------Lt~----eEr~~li~~~~~~~~grvpVi~ 129 (356)
+|.+.+.+.++.+.+.| +++|.+..|+|- -.. ||- .--.+++..+.+. .+++|||+
T Consensus 204 ~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~-~~~ipII~ 282 (354)
T 4ef8_A 204 FDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRR-CPGKLIFG 282 (354)
T ss_dssp CSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHH-CTTSEEEE
T ss_pred CCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHh-CCCCCEEE
Confidence 46778888898888998 999988666631 111 221 2335566666665 45799987
Q ss_pred ecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCC
Q 018443 130 NTGSNSTREAIHATEQGFAVGMHAALHINPYYG 162 (356)
Q Consensus 130 gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~ 162 (356)
.=|=.+.+++.+.. .+|||+|++-...++
T Consensus 283 ~GGI~s~~da~~~l----~aGAd~V~vgra~l~ 311 (354)
T 4ef8_A 283 CGGVYTGEDAFLHV----LAGASMVQVGTALQE 311 (354)
T ss_dssp ESCCCSHHHHHHHH----HHTEEEEEECHHHHH
T ss_pred ECCcCCHHHHHHHH----HcCCCEEEEhHHHHH
Confidence 65555677777765 379999999887553
No 171
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=88.55 E-value=11 Score=34.53 Aligned_cols=163 Identities=17% Similarity=0.076 Sum_probs=104.6
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCC-CcEE--EEec--CCCCHHHHHHHHHHH
Q 018443 72 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA-SVKV--IGNT--GSNSTREAIHATEQG 146 (356)
Q Consensus 72 ~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~g-rvpV--i~gv--g~~st~~ai~lar~a 146 (356)
.-..+.++++++...+.|+.+++++-+. +..+.+..++ .++| ++|. |..+++.-+.-++.|
T Consensus 55 ~~t~~~I~~lc~eA~~~~~aaVCV~p~~--------------V~~a~~~L~gs~v~v~tVigFP~G~~~~~~Kv~Ea~~A 120 (260)
T 3r12_A 55 FATPDDIKKLCLEARENRFHGVCVNPCY--------------VKLAREELEGTDVKVVTVVGFPLGANETRTKAHEAIFA 120 (260)
T ss_dssp TCCHHHHHHHHHHHHHTTCSEEEECGGG--------------HHHHHHHHTTSCCEEEEEESTTTCCSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEECHHH--------------HHHHHHHhcCCCCeEEEEecCCCCCCcHHHHHHHHHHH
Confidence 4567889999999999999999985432 2333443333 4554 3353 566788888899999
Q ss_pred HHcCCCEEEEcCCCC-C-CCCHHHHHHHHHHHHhcC---Ce-EEEeCCCCCCCCCCHHHHHHHhc---CCCEEEEeecCc
Q 018443 147 FAVGMHAALHINPYY-G-KTSLEGLISHFDSVLSMG---PT-IIYNVPSRTGQDIPPRVIHTMAQ---SPNLAGVKECVG 217 (356)
Q Consensus 147 ~~~Gadavlv~pP~y-~-~~s~~~l~~y~~~va~~~---Pi-ilYn~P~~tG~~ls~~~l~~La~---~pnivGiK~s~~ 217 (356)
.+.|||.+-++.++- . .-+.+.+.+-.++|.+++ |+ +|+. ++ .|+.+.+.+.++ --+.--||-|+|
T Consensus 121 i~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlE----t~-~Lt~eei~~A~~ia~eaGADfVKTSTG 195 (260)
T 3r12_A 121 VESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIE----TC-YLDTEEKIAACVISKLAGAHFVKTSTG 195 (260)
T ss_dssp HHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECC----GG-GCCHHHHHHHHHHHHHTTCSEEECCCS
T ss_pred HHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEe----CC-CCCHHHHHHHHHHHHHhCcCEEEcCCC
Confidence 999999997776642 2 246677888888887762 32 2332 33 578887776654 356677999886
Q ss_pred ---------hhh-HhhhhCCCeEE--EecCcc--hhHhHHHHcCCc--eeecc
Q 018443 218 ---------NDR-VEHYTGNGIVV--WSGNDD--QCHDARWNHGAT--GVISV 254 (356)
Q Consensus 218 ---------d~~-i~~~~~~~~~v--~~G~d~--~~l~~~l~~Ga~--G~is~ 254 (356)
|.+ +++..++++.| -.|--+ .++ .++.+|++ |.-++
T Consensus 196 f~~~GAT~edV~lm~~~vg~~v~VKaAGGIrt~~~al-~mi~aGA~RiGtS~g 247 (260)
T 3r12_A 196 FGTGGATAEDVHLMKWIVGDEMGVKASGGIRTFEDAV-KMIMYGADRIGTSSG 247 (260)
T ss_dssp SSSCCCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHH-HHHHTTCSEEEESCH
T ss_pred CCCCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHH-HHHHcCCceeecchH
Confidence 223 33444555544 333322 233 34789999 66444
No 172
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=88.55 E-value=4.1 Score=37.91 Aligned_cols=98 Identities=12% Similarity=0.007 Sum_probs=55.8
Q ss_pred eeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCC-cEEEEecCCCCHH
Q 018443 59 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGAS-VKVIGNTGSNSTR 137 (356)
Q Consensus 59 vi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~gr-vpVi~gvg~~st~ 137 (356)
+-.+.++=| +.|.-..+.-...++..++.|++-|=+.=..|...+=.+++-.+-+..+++.+++. ++||.=++..+.+
T Consensus 110 V~V~tVigF-P~G~~~~~~Kv~Ea~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~e 188 (288)
T 3oa3_A 110 VGVTCVIGF-HEGTYSTDQKVSEAKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTAD 188 (288)
T ss_dssp CEEEEEEST-TTSCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHH
T ss_pred CeEEEEeCC-CCCCCcHHHHHHHHHHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCCCCHH
Confidence 333333444 24555666666667777777777664433444433334455555555555554433 5666666666666
Q ss_pred HHHHHHHHHHHcCCCEEEEc
Q 018443 138 EAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 138 ~ai~lar~a~~~Gadavlv~ 157 (356)
+-+..++.|.++|||.|=..
T Consensus 189 ei~~A~~ia~eaGADfVKTS 208 (288)
T 3oa3_A 189 EIIAGCVLSSLAGADYVKTS 208 (288)
T ss_dssp HHHHHHHHHHHTTCSEEECC
T ss_pred HHHHHHHHHHHcCCCEEEcC
Confidence 66666677777777766544
No 173
>2oem_A 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; rubisco-like protein, isomerase; HET: KCX 1AE; 1.70A {Geobacillus kaustophilus} PDB: 2oel_A* 2oek_A* 2oej_A
Probab=88.32 E-value=4.9 Score=39.28 Aligned_cols=92 Identities=12% Similarity=0.051 Sum_probs=69.1
Q ss_pred ecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEcc-CcccccCCCHHHHHHHHHHHHH----HhCCCcEEEEecCCCCHHH
Q 018443 64 KTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGG-TTGEGQLMSWDEHIMLIGHTVN----CFGASVKVIGNTGSNSTRE 138 (356)
Q Consensus 64 ~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~G-stGE~~~Lt~eEr~~li~~~~~----~~~grvpVi~gvg~~st~~ 138 (356)
-|-+++.--+.-+.+.+.+-.+...|+|=+= .- .-+....+.++||...+..+++ .++.+.-..+++++ +.+|
T Consensus 143 gtiiKPklGls~~~~a~~~ye~~~GGlDfiK-DDE~~~~qpf~p~~eR~~~v~eai~ra~~eTGe~k~~~~NiT~-~~~e 220 (413)
T 2oem_A 143 MSIFKGMIGRDLAYLTSELKKQALGGVDLVK-DDEILFDSELLPFEKRITEGKAALQEVYEQTGKRTLYAVNLTG-KTFA 220 (413)
T ss_dssp EEECCSCTTCCHHHHHHHHHHHHHTTCSEEE-CCTTCCCCSSSCHHHHHHHHHHHHHHHHHHHSCCCEEEEECCS-CGGG
T ss_pred EeecCccccCCHHHHHHHHHHHHhCCCceee-CCCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCcceeeCcCCC-CHHH
Confidence 3344555558999999999999999999552 22 3456667899999875544443 44444445779984 8999
Q ss_pred HHHHHHHHHHcCCCEEEEc
Q 018443 139 AIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 139 ai~lar~a~~~Gadavlv~ 157 (356)
.+++++.+++.|+.++|+-
T Consensus 221 m~~Ra~~a~e~G~~~~mvd 239 (413)
T 2oem_A 221 LKDKAKRAAELGADVLLFN 239 (413)
T ss_dssp HHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHhCCCeEEEe
Confidence 9999999999999999985
No 174
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=88.31 E-value=7 Score=37.11 Aligned_cols=126 Identities=6% Similarity=-0.049 Sum_probs=74.9
Q ss_pred CCCHHHHHHHHH-------HHHHCCCCEEEEccCc----------------ccccCCCHHHHHH----HHHHHHHHhCCC
Q 018443 72 RFDLEAYDDLVN-------MQIVNGAEGMIVGGTT----------------GEGQLMSWDEHIM----LIGHTVNCFGAS 124 (356)
Q Consensus 72 ~ID~~~l~~~v~-------~li~~Gv~Gl~v~Gst----------------GE~~~Lt~eEr~~----li~~~~~~~~gr 124 (356)
.+..+.++++++ ...++|.|||=+.|.. .|+-- |.+.|.+ +++.+.+.++.+
T Consensus 132 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGG-slenR~rf~~eiv~aVr~avg~d 210 (343)
T 3kru_A 132 ELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGN-SIENRARFLIEVIDEVRKNWPEN 210 (343)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSS-SHHHHTHHHHHHHHHHHHTSCTT
T ss_pred hcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhcc-chHhHHHHHHHHHHHHHhcCCcc
Confidence 355555555554 4566899999888643 23222 5667765 455555555556
Q ss_pred cEEEEecC-------CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCC----CHHHHHHHHHHHHhc--CCeEEEeCCCCC
Q 018443 125 VKVIGNTG-------SNSTREAIHATEQGFAVGMHAALHINPYYGKT----SLEGLISHFDSVLSM--GPTIIYNVPSRT 191 (356)
Q Consensus 125 vpVi~gvg-------~~st~~ai~lar~a~~~Gadavlv~pP~y~~~----s~~~l~~y~~~va~~--~PiilYn~P~~t 191 (356)
.||.+=++ +.+.++++++++..+++ +|.+-+....+... .+..-..+.+.|.+. .||+. .
T Consensus 211 ~pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~------~ 283 (343)
T 3kru_A 211 KPIFVRVSADDYMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSA------V 283 (343)
T ss_dssp SCEEEEEECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEE------E
T ss_pred CCeEEEeechhhhccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcCcccce------e
Confidence 78876333 34689999999999999 99998853322110 011123344445444 56653 2
Q ss_pred CCCCCHHHHHHHhc
Q 018443 192 GQDIPPRVIHTMAQ 205 (356)
Q Consensus 192 G~~ls~~~l~~La~ 205 (356)
|---+++..+++.+
T Consensus 284 Ggi~t~e~Ae~~l~ 297 (343)
T 3kru_A 284 GLITTQELAEEILS 297 (343)
T ss_dssp SSCCCHHHHHHHHH
T ss_pred eeeeHHHHHHHHHh
Confidence 33346777777664
No 175
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=88.25 E-value=2.4 Score=37.32 Aligned_cols=77 Identities=13% Similarity=0.094 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEE
Q 018443 77 AYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALH 156 (356)
Q Consensus 77 ~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv 156 (356)
...+.++.+.+.|++.+.+....+.+. ......++++.+.+.+ ++|++++-+-.+.++ ++.+.++|||++.+
T Consensus 34 ~~~~~a~~~~~~G~d~i~v~~~~~~~~--~~~~~~~~i~~i~~~~--~ipvi~~g~i~~~~~----~~~~~~~Gad~V~i 105 (253)
T 1h5y_A 34 DPVEMAVRYEEEGADEIAILDITAAPE--GRATFIDSVKRVAEAV--SIPVLVGGGVRSLED----ATTLFRAGADKVSV 105 (253)
T ss_dssp CHHHHHHHHHHTTCSCEEEEECCCCTT--THHHHHHHHHHHHHHC--SSCEEEESSCCSHHH----HHHHHHHTCSEEEE
T ss_pred cHHHHHHHHHHcCCCEEEEEeCCcccc--CCcccHHHHHHHHHhc--CCCEEEECCCCCHHH----HHHHHHcCCCEEEE
Confidence 456778888899999998875554332 2333455666666654 689998776665544 45666689999998
Q ss_pred cCCCC
Q 018443 157 INPYY 161 (356)
Q Consensus 157 ~pP~y 161 (356)
..+.+
T Consensus 106 ~~~~~ 110 (253)
T 1h5y_A 106 NTAAV 110 (253)
T ss_dssp SHHHH
T ss_pred ChHHh
Confidence 75533
No 176
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=88.21 E-value=0.99 Score=39.27 Aligned_cols=104 Identities=13% Similarity=0.013 Sum_probs=60.8
Q ss_pred HHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 159 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP 159 (356)
..++.+.+.|++++.+.+..+| +.-.++++.+.+. .+++++.+.+.. +..+.++.+.+.|+|.+.+. |
T Consensus 68 ~~~~~~~~~Gad~v~v~~~~~~------~~~~~~~~~~~~~---g~~~~v~~~~~~--t~~~~~~~~~~~g~d~i~v~-~ 135 (211)
T 3f4w_A 68 FESQLLFDAGADYVTVLGVTDV------LTIQSCIRAAKEA---GKQVVVDMICVD--DLPARVRLLEEAGADMLAVH-T 135 (211)
T ss_dssp HHHHHHHHTTCSEEEEETTSCH------HHHHHHHHHHHHH---TCEEEEECTTCS--SHHHHHHHHHHHTCCEEEEE-C
T ss_pred HHHHHHHhcCCCEEEEeCCCCh------hHHHHHHHHHHHc---CCeEEEEecCCC--CHHHHHHHHHHcCCCEEEEc-C
Confidence 4588899999999998665432 3335566555443 346666543332 34677888999999998664 4
Q ss_pred CCC----CCCHHHHHHHHHHHHhc---CCeEEEeCCCCCCCCCCHHHHHHHhc
Q 018443 160 YYG----KTSLEGLISHFDSVLSM---GPTIIYNVPSRTGQDIPPRVIHTMAQ 205 (356)
Q Consensus 160 ~y~----~~s~~~l~~y~~~va~~---~PiilYn~P~~tG~~ls~~~l~~La~ 205 (356)
.+. .++ ..++++++.+. .|+++ ..| ++++.+.++.+
T Consensus 136 g~~g~~~~~~---~~~~i~~l~~~~~~~~i~~-----~gG--I~~~~~~~~~~ 178 (211)
T 3f4w_A 136 GTDQQAAGRK---PIDDLITMLKVRRKARIAV-----AGG--ISSQTVKDYAL 178 (211)
T ss_dssp CHHHHHTTCC---SHHHHHHHHHHCSSCEEEE-----ESS--CCTTTHHHHHT
T ss_pred CCcccccCCC---CHHHHHHHHHHcCCCcEEE-----ECC--CCHHHHHHHHH
Confidence 321 111 23444555543 34432 123 45677777765
No 177
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=88.19 E-value=10 Score=36.13 Aligned_cols=122 Identities=10% Similarity=0.079 Sum_probs=90.1
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHHHHHHHHHHcCC
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 151 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai~lar~a~~~Ga 151 (356)
-|.+.+.+.++...+.|.+++=+-... +.++=.++++.+.+.++.++++.+=+ ++.+.++++++++..++.|+
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~iKik~g~------~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i 217 (379)
T 2rdx_A 144 RSEAETRAELARHRAAGYRQFQIKVGA------DWQSDIDRIRACLPLLEPGEKAMADANQGWRVDNAIRLARATRDLDY 217 (379)
T ss_dssp SCSHHHHHHHHHHHHTTCCEEEEECCS------CHHHHHHHHHHHGGGSCTTCEEEEECTTCSCHHHHHHHHHHTTTSCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccC------CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhCCe
Confidence 356788888999999999998664332 45666788888888888788988765 45589999999999999887
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh--cCCCEEEEeecC
Q 018443 152 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA--QSPNLAGVKECV 216 (356)
Q Consensus 152 davlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La--~~pnivGiK~s~ 216 (356)
++-.|.. + .+.+++|.+. .||+.=. .-.+++.++++. ..-+++.+|-+-
T Consensus 218 ---~iE~P~~---~----~~~~~~l~~~~~iPI~~de------~i~~~~~~~~~i~~~~~d~v~ik~~~ 270 (379)
T 2rdx_A 218 ---ILEQPCR---S----YEECQQVRRVADQPMKLDE------CVTGLHMAQRIVADRGAEICCLKISN 270 (379)
T ss_dssp ---EEECCSS---S----HHHHHHHHTTCCSCEEECT------TCCSHHHHHHHHHHTCCSEEEEETTT
T ss_pred ---EEeCCcC---C----HHHHHHHHhhCCCCEEEeC------CcCCHHHHHHHHHcCCCCEEEEeccc
Confidence 4455643 2 5566777775 5766432 335678888886 357899999765
No 178
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=88.02 E-value=2.9 Score=38.77 Aligned_cols=108 Identities=8% Similarity=0.001 Sum_probs=66.4
Q ss_pred HHHHHHHHHCCCCEEEEccCcccccCC-CHHHH--------HHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHH-H
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTGEGQLM-SWDEH--------IMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGF-A 148 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstGE~~~L-t~eEr--------~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~-~ 148 (356)
+..++.+-+.||+..++.++.+-+... +.++- ..+. .+++...+|..-++++--...+++++..+++. +
T Consensus 57 ~~~l~~m~~~GV~~~v~~~~~~~~~~~~~~~~~~~~~~~~N~~~~-~~~~~~p~r~~~~~~l~~~~~~~a~~el~~~~~~ 135 (336)
T 2wm1_A 57 EVRIREMDQKGVTVQALSTVPVMFSYWAKPEDTLNLCQLLNNDLA-STVVSYPRRFVGLGTLPMQAPELAVKEMERCVKE 135 (336)
T ss_dssp HHHHHHHHHHTCCEEEEECCGGGGCTTSCHHHHHHHHHHHHHHHH-HHHHHSTTTEEEEECCCTTSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCEEEECCCchhhcccCCHHHHHHHHHHHHHHHH-HHHHhccCceeEEEeCCCcCHHHHHHHHHHHHHc
Confidence 455556667899998887665432222 33221 2222 23333455655555665556677888777776 5
Q ss_pred cCCCEEEEcCCCCC-CCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018443 149 VGMHAALHINPYYG-KTSLEGLISHFDSVLSM-GPTIIYNV 187 (356)
Q Consensus 149 ~Gadavlv~pP~y~-~~s~~~l~~y~~~va~~-~PiilYn~ 187 (356)
.|+.||-+.+-+.. ..+++.+...|+.+.+. +||+++-.
T Consensus 136 ~g~~Gv~l~~~~~~~~l~d~~~~~~~~~~~e~~lpv~iH~~ 176 (336)
T 2wm1_A 136 LGFPGVQIGTHVNEWDLNAQELFPVYAAAERLKCSLFVHPW 176 (336)
T ss_dssp SCCSEEEEESEETTEETTCGGGHHHHHHHHHHTCEEEEECC
T ss_pred cCCeEEEECCcCCCCCCCCccHHHHHHHHHHcCCEEEECCC
Confidence 79999976542221 24556788888888776 79998754
No 179
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=88.01 E-value=11 Score=33.24 Aligned_cols=130 Identities=5% Similarity=0.012 Sum_probs=73.4
Q ss_pred HHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEE-Eec----CCCC---HHHHHHHHHHHHHc
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVI-GNT----GSNS---TREAIHATEQGFAV 149 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi-~gv----g~~s---t~~ai~lar~a~~~ 149 (356)
+...++.+.+.|.+||=+.+.......++.++..++- ..++.. .+.+. ++. .... .+...+.++.|+++
T Consensus 21 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~-~~~~~~--gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l 97 (272)
T 2q02_A 21 IEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVR-NLAEKY--GLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGV 97 (272)
T ss_dssp HHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHH-HHHHHT--TCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeeccccccccccccCHHHHH-HHHHHc--CCeEEechhhhccCCcHHHHHHHHHHHHHHHHHh
Confidence 4667777788999999775432222222333333333 333333 34442 222 1111 34566777888999
Q ss_pred CCCEEEEcCCCCCCCCHHHH-HHHHHHHHhc-----CCeEEEeCCCCCCCCCCHHHHHHHhc-C-CCEE
Q 018443 150 GMHAALHINPYYGKTSLEGL-ISHFDSVLSM-----GPTIIYNVPSRTGQDIPPRVIHTMAQ-S-PNLA 210 (356)
Q Consensus 150 Gadavlv~pP~y~~~s~~~l-~~y~~~va~~-----~PiilYn~P~~tG~~ls~~~l~~La~-~-pniv 210 (356)
|++.+.+.+........+.+ .+.++++++. +.+.+-|.+......-+++.+.+|.+ + ||+-
T Consensus 98 G~~~v~~~~g~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~~~~~~~~~~~~~~~l~~~v~~~~g 166 (272)
T 2q02_A 98 GARALVLCPLNDGTIVPPEVTVEAIKRLSDLFARYDIQGLVEPLGFRVSSLRSAVWAQQLIREAGSPFK 166 (272)
T ss_dssp TCSEEEECCCCSSBCCCHHHHHHHHHHHHHHHHTTTCEEEECCCCSTTCSCCCHHHHHHHHHHHTCCCE
T ss_pred CCCEEEEccCCCchhHHHHHHHHHHHHHHHHHHHcCCEEEEEecCCCcccccCHHHHHHHHHHhCcCeE
Confidence 99999886544333344666 7888887653 35666666522223345777777763 3 6654
No 180
>2zvi_A 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; methionine salvage pathway, amino-acid biosynthesis, isomerase, magnesium, metal- binding; 2.30A {Bacillus subtilis}
Probab=87.98 E-value=5.5 Score=39.10 Aligned_cols=93 Identities=14% Similarity=0.058 Sum_probs=69.5
Q ss_pred ecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEcc-CcccccCCCHHHHHHHHHHHHH----HhCCCcEEEEecCCCCHHH
Q 018443 64 KTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGG-TTGEGQLMSWDEHIMLIGHTVN----CFGASVKVIGNTGSNSTRE 138 (356)
Q Consensus 64 ~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~G-stGE~~~Lt~eEr~~li~~~~~----~~~grvpVi~gvg~~st~~ 138 (356)
-|-+.+.--+.-+.+.+.+-.+...|+|=+= .- .-+....+.++||...+..+++ .++.+.-..+++++ +++|
T Consensus 157 gtiiKPklGLs~~~~a~~~ye~~~GGlDfiK-DDE~l~~qpf~p~~eRv~~v~eai~ra~~eTGe~k~y~~NiT~-~~~e 234 (425)
T 2zvi_A 157 MSIFKGVIGRDLSDIKEQLRQQALGGVDLIK-DDEIFFETGLAPFETRIAEGKQILKETYEQTGHKTLYAVNLTG-RTAD 234 (425)
T ss_dssp EEECSCCTTCCHHHHHHHHHHHHHTTCSEEE-CCTTCCCSSSSCHHHHHHHHHHHHHHHHHHHSCCCEEEEECCS-CGGG
T ss_pred EeecCCcccCCHHHHHHHHHHHHhCCCCeee-CCCCCCCCCCccHHHHHHHHHHHHHHHHHHhCCcceeeCcCCC-CHHH
Confidence 3444555558999999999999999999542 22 4456678899999886554444 34444445679984 6999
Q ss_pred HHHHHHHHHHcCCCEEEEcC
Q 018443 139 AIHATEQGFAVGMHAALHIN 158 (356)
Q Consensus 139 ai~lar~a~~~Gadavlv~p 158 (356)
.+++++.+++.|++++|+-+
T Consensus 235 m~~Ra~~a~e~G~~~~mvd~ 254 (425)
T 2zvi_A 235 LKDKARRAAELGADALLFNV 254 (425)
T ss_dssp HHHHHHHHHHTTCSEEEECG
T ss_pred HHHHHHHHHHhCCCeEEEee
Confidence 99999999999999999763
No 181
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=87.93 E-value=4.3 Score=37.35 Aligned_cols=19 Identities=16% Similarity=0.354 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHCCCCEEEE
Q 018443 77 AYDDLVNMQIVNGAEGMIV 95 (356)
Q Consensus 77 ~l~~~v~~li~~Gv~Gl~v 95 (356)
++++.++.+.++|++|+++
T Consensus 113 g~~~f~~~~~~aGvdGvIi 131 (271)
T 3nav_A 113 GIDDFYQRCQKAGVDSVLI 131 (271)
T ss_dssp CHHHHHHHHHHHTCCEEEE
T ss_pred hHHHHHHHHHHCCCCEEEE
Confidence 3466666666667777665
No 182
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=87.69 E-value=1.1 Score=39.97 Aligned_cols=89 Identities=17% Similarity=0.127 Sum_probs=57.5
Q ss_pred HHHHHHHHHCCCCEEEEccCcccc--cCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHH-HHcC-CCEE
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTGEG--QLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQG-FAVG-MHAA 154 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstGE~--~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a-~~~G-adav 154 (356)
..+++.+.+.|++.+++.+.+-+. .-.+ .++++.+.+.+ ++|||++=|-.+.+++.++.+.. +..| +|++
T Consensus 147 ~e~~~~~~~~G~~~i~~t~~~~~g~~~g~~----~~~i~~l~~~~--~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv 220 (241)
T 1qo2_A 147 VSLLKRLKEYGLEEIVHTEIEKDGTLQEHD----FSLTKKIAIEA--EVKVLAAGGISSENSLKTAQKVHTETNGLLKGV 220 (241)
T ss_dssp HHHHHHHHTTTCCEEEEEETTHHHHTCCCC----HHHHHHHHHHH--TCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEE
T ss_pred HHHHHHHHhCCCCEEEEEeecccccCCcCC----HHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHhcccccCCeEeEE
Confidence 344555667899999997754322 2234 34444555554 68999976665667776665442 1338 9999
Q ss_pred EEcCCCC-CCCCHHHHHHHH
Q 018443 155 LHINPYY-GKTSLEGLISHF 173 (356)
Q Consensus 155 lv~pP~y-~~~s~~~l~~y~ 173 (356)
++..-.| .+.+.+++.+|+
T Consensus 221 ~vgsal~~~~~~~~~~~~~~ 240 (241)
T 1qo2_A 221 IVGRAFLEGILTVEVMKRYA 240 (241)
T ss_dssp EECHHHHTTSSCHHHHHHHH
T ss_pred EeeHHHHcCCCCHHHHHHHh
Confidence 9987766 446778777764
No 183
>3fk4_A Rubisco-like protein; structural genomics, target 9463A, PSI-2, protein structure initiative; 2.00A {Bacillus cereus atcc 14579}
Probab=87.65 E-value=5.7 Score=38.83 Aligned_cols=95 Identities=13% Similarity=0.063 Sum_probs=71.7
Q ss_pred eeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHH----hCCCcEEEEecCCC
Q 018443 59 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNC----FGASVKVIGNTGSN 134 (356)
Q Consensus 59 vi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~----~~grvpVi~gvg~~ 134 (356)
++-.++-| .--+.-+.+.+.+-.+...|+|=+====.-+....+.++||...+..+++. ++.+.-..+++++.
T Consensus 142 l~gtiiKP---klGls~~~~a~~~ye~~~GGlDfiKDDE~l~~q~f~p~~eRv~~v~eai~rA~~eTGe~k~y~~NiTa~ 218 (414)
T 3fk4_A 142 LLMSIFKG---MIGRNIGYLKTQLRDQAIGGVDIVKDDEILFENALTPLTKRIVSGKEVLQSVYETYGHKTLYAVNLTGR 218 (414)
T ss_dssp EEEEECSS---CTTCCHHHHHHHHHHHHHTTCSEEECCTTCCSCSSSCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCSC
T ss_pred eeEeeccc---ccCCCHHHHHHHHHHHHhcCCCcCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHhhCCcceEEeEcCCC
Confidence 55555544 434899999999999999999976322234467788999998877666553 34444457799885
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEc
Q 018443 135 STREAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 135 st~~ai~lar~a~~~Gadavlv~ 157 (356)
++|.+++++.+++.|+.++|+-
T Consensus 219 -~~em~~ra~~a~e~G~~~~mvd 240 (414)
T 3fk4_A 219 -TFDLKENAKRAVQAGADILLFN 240 (414)
T ss_dssp -GGGHHHHHHHHHHHTCSEEEEC
T ss_pred -HHHHHHHHHHHHHcCCCEEEEc
Confidence 6999999999999999999975
No 184
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=87.61 E-value=3.8 Score=36.44 Aligned_cols=75 Identities=17% Similarity=0.115 Sum_probs=50.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccc-ccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCC
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGE-GQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGM 151 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE-~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Ga 151 (356)
+|.+.+.+..+.+.+.|+|+|-.+ ||= ..-.|. +.++.+.+.+++++||++.=|=.+.+++.++. ++||
T Consensus 129 l~~~~~~~~a~~a~eaGad~I~ts--tg~~~gga~~----~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l----~aGA 198 (225)
T 1mzh_A 129 LNEEEIKKAVEICIEAGADFIKTS--TGFAPRGTTL----EEVRLIKSSAKGRIKVKASGGIRDLETAISMI----EAGA 198 (225)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECC--CSCSSSCCCH----HHHHHHHHHHTTSSEEEEESSCCSHHHHHHHH----HTTC
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEC--CCCCCCCCCH----HHHHHHHHHhCCCCcEEEECCCCCHHHHHHHH----HhCc
Confidence 667778999999999999999443 221 111233 34445555667799998755555677777777 3799
Q ss_pred CEEEEc
Q 018443 152 HAALHI 157 (356)
Q Consensus 152 davlv~ 157 (356)
|.+-+.
T Consensus 199 ~~iG~s 204 (225)
T 1mzh_A 199 DRIGTS 204 (225)
T ss_dssp SEEEES
T ss_pred hHHHHc
Confidence 965443
No 185
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=87.61 E-value=1.5 Score=40.95 Aligned_cols=108 Identities=8% Similarity=-0.009 Sum_probs=70.9
Q ss_pred HHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHH-------HHHHhCCCcE-EEEecCCCCHHHHHHHHHHHH-Hc
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGH-------TVNCFGASVK-VIGNTGSNSTREAIHATEQGF-AV 149 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~-------~~~~~~grvp-Vi~gvg~~st~~ai~lar~a~-~~ 149 (356)
+..++.+-+.||++++...+.+.......++-..+.+. +++...+|.. .++.+.-.+.+++++..+++. +.
T Consensus 44 ~~rl~~Md~~Gv~~vl~~~~~~~~~~~d~~~~~~~~r~~N~~l~~~~~~~p~rf~g~~a~vp~~~~~~a~~el~r~~~~~ 123 (312)
T 3ij6_A 44 DERLTKWPDQNTKQVISLANISPEDFTDSKTSAELCQSANEELSNLVDQHPGKFAGAVAILPMNNIESACKVISSIKDDE 123 (312)
T ss_dssp HHHHHTCSCTTEEEEEEECSCCGGGTSCHHHHHHHHHHHHHHHHHHHHHCTTTEEEEEEECCTTCHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHcCCeEEEECCCCcccccCCHHHHHHHHHHHHHHHHHHHHhCCCceeeeEEecCccCHHHHHHHHHHHHHhC
Confidence 34555555689998887777666555566555544422 2233345654 455555556778888888875 68
Q ss_pred CCCEEEEcCCCCC-CCCHHHHHHHHHHHHhc-CCeEEEe
Q 018443 150 GMHAALHINPYYG-KTSLEGLISHFDSVLSM-GPTIIYN 186 (356)
Q Consensus 150 Gadavlv~pP~y~-~~s~~~l~~y~~~va~~-~PiilYn 186 (356)
|+.++.+.+.+-. .++++.+...|+.+.+. .||.++-
T Consensus 124 G~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~g~pv~iH~ 162 (312)
T 3ij6_A 124 NLVGAQIFTRHLGKSIADKEFRPVLAQAAKLHVPLWMHP 162 (312)
T ss_dssp TEEEEEEESEETTEETTSTTTHHHHHHHHHTTCCEEEEC
T ss_pred CCceEeccCCCCCCCCCCccHHHHHHHHHHcCCeEEEcC
Confidence 9999987643221 24667788899998887 7988874
No 186
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=87.61 E-value=8.8 Score=34.86 Aligned_cols=166 Identities=11% Similarity=0.046 Sum_probs=85.8
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhC-CCcEEEEecCC-CCHHHHHHHHHHHHHcC
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFG-ASVKVIGNTGS-NSTREAIHATEQGFAVG 150 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~-grvpVi~gvg~-~st~~ai~lar~a~~~G 150 (356)
-|.+.+ ++.+.++|++-+-+.....+....+.+ .+++ .++ -+++++.++.. .+.++++.+++.++++|
T Consensus 23 p~~~~~---~~~l~~~Gad~ielg~pr~~~~g~~~~---~~~~----~l~~~~~~~~pn~~~~~~~~~~~~f~~~a~~ag 92 (264)
T 1xm3_A 23 PSFDIQ---KEAVAVSESDILTFAVRRMNIFEASQP---NFLE----QLDLSKYTLLPNTAGASTAEEAVRIARLAKASG 92 (264)
T ss_dssp SCHHHH---HHHHHHHTCSEEEEETTSSTTC----------CT----TCCGGGSEEEEECTTCSSHHHHHHHHHHHHHTT
T ss_pred CCHHHH---HHHHHHcCCeEEEEcccccccCCCCHH---HHHH----HHHhcCCeEcCCccccCCHHHHHHHHHHHHHcC
Confidence 444444 357778899999776543332222222 2222 222 25677777644 78899999999999986
Q ss_pred CCEEE-E-cCCCC--CCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHhcC-CCEEEE-eecCc------
Q 018443 151 MHAAL-H-INPYY--GKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMAQS-PNLAGV-KECVG------ 217 (356)
Q Consensus 151 adavl-v-~pP~y--~~~s~~~l~~y~~~va~~-~PiilYn~P~~tG~~ls~~~l~~La~~-pnivGi-K~s~~------ 217 (356)
.+.++ + +.|.. .....+++.+..++.... ..++.+..| +++.+.++.+. ..++.. .-..+
T Consensus 93 g~~~i~l~i~~d~~~~~~e~~~~~~~a~~~~~~g~~vi~~~~~-------~~~~a~~~~~~gad~v~~~~~~~Gt~~~~~ 165 (264)
T 1xm3_A 93 LCDMIKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTSD-------DVVLARKLEELGVHAIMPGASPIGSGQGIL 165 (264)
T ss_dssp CCSSEEECCBCCTTTCCBCHHHHHHHHHHHHHTTCCEEEEECS-------CHHHHHHHHHHTCSCBEECSSSTTCCCCCS
T ss_pred CCCeEEEeecCCCcccccchHHHHHHHHHHHCCCeEEEEEcCC-------CHHHHHHHHHhCCCEEEECCcccCCCCCCC
Confidence 55442 2 22321 123445666666665443 455556554 24556666532 223211 11000
Q ss_pred hh----hHhhhhCCCeEEEecCc--chhHhHHHHcCCceeecccc
Q 018443 218 ND----RVEHYTGNGIVVWSGND--DQCHDARWNHGATGVISVTS 256 (356)
Q Consensus 218 d~----~i~~~~~~~~~v~~G~d--~~~l~~~l~~Ga~G~is~~~ 256 (356)
+. ++.+..+-.+.+-.|-. +.+. ..+..|++|++.+++
T Consensus 166 ~~~~l~~i~~~~~iPviv~gGI~t~eda~-~~~~~GAdgViVGSA 209 (264)
T 1xm3_A 166 NPLNLSFIIEQAKVPVIVDAGIGSPKDAA-YAMELGADGVLLNTA 209 (264)
T ss_dssp CHHHHHHHHHHCSSCBEEESCCCSHHHHH-HHHHTTCSEEEESHH
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCHHHHH-HHHHcCCCEEEEcHH
Confidence 11 23332222333334442 2333 347899999998875
No 187
>1ykw_A Rubisco-like protein; beta-alpha-barrel, unknown function; 2.00A {Chlorobaculum tepidum} SCOP: c.1.14.1 d.58.9.1 PDB: 1tel_A
Probab=87.57 E-value=4.7 Score=39.71 Aligned_cols=92 Identities=11% Similarity=0.085 Sum_probs=69.0
Q ss_pred ecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEcc-CcccccCCCHHHHHHHHHHHHH----HhCCCcEEEEecCCCCHHH
Q 018443 64 KTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGG-TTGEGQLMSWDEHIMLIGHTVN----CFGASVKVIGNTGSNSTRE 138 (356)
Q Consensus 64 ~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~G-stGE~~~Lt~eEr~~li~~~~~----~~~grvpVi~gvg~~st~~ 138 (356)
-|-+.+.--+.-+.+.+.+-.+...|+|=+= .- .-+....+.++||...+..+++ .++.+.-..+++++ +.+|
T Consensus 168 gtiiKPklGLs~~~~a~~~ye~~~GGlDfiK-DDE~~~~qpf~p~~eR~~~v~eai~~a~~eTGe~k~~~~NiT~-~~~e 245 (435)
T 1ykw_A 168 FGVVKPNIGLSPGEFAEIAYQSWLGGLDIAK-DDEMLADVTWSSIEERAAHLGKARRKAEAETGEPKIYLANITD-EVDS 245 (435)
T ss_dssp EEECSSCSSCCHHHHHHHHHHHHHTTCSEEE-CCTTCSSBTTBCHHHHHHHHHHHHHHHHHHHSSCCEEEEECCC-CGGG
T ss_pred eeeccCcCCCCHHHHHHHHHHHHhcCCCccc-CccccCCCCCCcHHHHHHHHHHHHHHHHHhhCCcceeecccCC-CHHH
Confidence 3334555558999999999999999999542 22 3456678889999875544443 44444445679984 8999
Q ss_pred HHHHHHHHHHcCCCEEEEc
Q 018443 139 AIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 139 ai~lar~a~~~Gadavlv~ 157 (356)
.+++++.+++.|+.++|+-
T Consensus 246 m~~Ra~~a~e~G~~~~mvd 264 (435)
T 1ykw_A 246 LMEKHDVAVRNGANALLIN 264 (435)
T ss_dssp HHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEe
Confidence 9999999999999999985
No 188
>2qyg_A Ribulose bisphosphate carboxylase-like protein 2; beta-alpha-barrel, unknown function; 3.30A {Rhodopseudomonas palustris}
Probab=87.55 E-value=4 Score=40.36 Aligned_cols=94 Identities=13% Similarity=0.125 Sum_probs=69.3
Q ss_pred eeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEcc-CcccccCCCHHHHHHHHHHHHH----HhCCCcEEEEecCC
Q 018443 59 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGG-TTGEGQLMSWDEHIMLIGHTVN----CFGASVKVIGNTGS 133 (356)
Q Consensus 59 vi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~G-stGE~~~Lt~eEr~~li~~~~~----~~~grvpVi~gvg~ 133 (356)
++-.++ .+.--+.-+.+.+.+-.+...|+|=+= .- .-+....+.++||...+-.+++ .++.+.-..++++
T Consensus 186 llgtii---KPklGLs~~~~a~~~ye~~~GGlDfiK-DDE~l~~qpf~p~~eR~~~v~eai~ra~~eTGe~k~y~~NiT- 260 (452)
T 2qyg_A 186 IFFGVI---KPNIGLPPQPFAELGYQSWTGGLDIAK-DDEMLADVDWCPLAERAALLGDACRRASAETGVPKIYLANIT- 260 (452)
T ss_dssp EEEEEC---SSCTTCCSHHHHHHHHHHHHHTCSEEE-CCTTCCSCTTSCHHHHHHHHHHHHHHHHHHHSSCCEEEEECC-
T ss_pred eEeeec---CCcCCCCHHHHHHHHHHHHhCCCCccc-CCccCCCCCCCcHHHHHHHHHHHHHHHHHHhCCcceecCcCC-
Confidence 444444 444458889999999999999999552 22 3456667899999875544443 4444444567998
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEc
Q 018443 134 NSTREAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 134 ~st~~ai~lar~a~~~Gadavlv~ 157 (356)
.+.+|.+++++.|+++|+.++|+-
T Consensus 261 ~~~~eM~~Ra~~a~e~G~~~vmvd 284 (452)
T 2qyg_A 261 DEVDRLTELHDVAVANGAGALLIN 284 (452)
T ss_dssp CCTTHHHHHHHHHHHTTCCEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEe
Confidence 489999999999999999999985
No 189
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=87.52 E-value=4.2 Score=40.80 Aligned_cols=67 Identities=10% Similarity=0.141 Sum_probs=47.6
Q ss_pred HHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEE
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALH 156 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv 156 (356)
.+.++.++++|++.+.+..+.|- .+.-.++++.+.+..+ .+||++|--. +.+.++.+.++|+|++.+
T Consensus 258 ~era~aLveaGvd~I~Id~a~g~-----~~~v~~~i~~i~~~~~-~~~vi~g~v~-----t~e~a~~~~~aGad~i~v 324 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHGH-----SQGVIDKVKEVRAKYP-SLNIIAGNVA-----TAEATKALIEAGANVVKV 324 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTT-----SHHHHHHHHHHHHHCT-TSEEEEEEEC-----SHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhhccceEEecccccc-----hhhhhhHHHHHHHhCC-CceEEeeeec-----cHHHHHHHHHhCCCEEEE
Confidence 44578889999999998776552 2334456777766653 5788875322 345678889999999987
No 190
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=87.50 E-value=2.8 Score=39.27 Aligned_cols=102 Identities=15% Similarity=0.064 Sum_probs=62.9
Q ss_pred HHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEc
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~ 157 (356)
+.+.++.+++.|++++.+.+. + . .++++.+.+. .++++..+.+ .+.++.+.+.|+|++.+.
T Consensus 85 ~~~~~~~~~~~g~d~V~~~~g--~----p----~~~~~~l~~~---gi~vi~~v~t------~~~a~~~~~~GaD~i~v~ 145 (328)
T 2gjl_A 85 YAEYRAAIIEAGIRVVETAGN--D----P----GEHIAEFRRH---GVKVIHKCTA------VRHALKAERLGVDAVSID 145 (328)
T ss_dssp HHHHHHHHHHTTCCEEEEEES--C----C----HHHHHHHHHT---TCEEEEEESS------HHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEcCC--C----c----HHHHHHHHHc---CCCEEeeCCC------HHHHHHHHHcCCCEEEEE
Confidence 567888889999999987643 2 2 2344444332 5788877742 345667889999999987
Q ss_pred CCCCCCC-C--HHHHHHHHHHHHhc--CCeEEEeCCCCCCCCC-CHHHHHHHhc
Q 018443 158 NPYYGKT-S--LEGLISHFDSVLSM--GPTIIYNVPSRTGQDI-PPRVIHTMAQ 205 (356)
Q Consensus 158 pP~y~~~-s--~~~l~~y~~~va~~--~PiilYn~P~~tG~~l-s~~~l~~La~ 205 (356)
.+..... . ...-.+.+.++.+. .||+.= | .+ +++.+.+..+
T Consensus 146 g~~~GG~~G~~~~~~~~~l~~v~~~~~iPviaa------G-GI~~~~~v~~al~ 192 (328)
T 2gjl_A 146 GFECAGHPGEDDIPGLVLLPAAANRLRVPIIAS------G-GFADGRGLVAALA 192 (328)
T ss_dssp CTTCSBCCCSSCCCHHHHHHHHHTTCCSCEEEE------S-SCCSHHHHHHHHH
T ss_pred CCCCCcCCCCccccHHHHHHHHHHhcCCCEEEE------C-CCCCHHHHHHHHH
Confidence 6543211 1 11234666777765 466543 2 34 5666666543
No 191
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=87.42 E-value=15 Score=32.47 Aligned_cols=175 Identities=14% Similarity=0.099 Sum_probs=93.2
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEc------cCcccc----------cCCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Q 018443 70 DGRFDLEAYDDLVNMQIVNGAEGMIVG------GTTGEG----------QLMSWDEHIMLIGHTVNCFGASVKVIGNTGS 133 (356)
Q Consensus 70 dg~ID~~~l~~~v~~li~~Gv~Gl~v~------GstGE~----------~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~ 133 (356)
.+..|.+.+.+.++.+.+. ++.|-+. -.-|.+ .-.+.+.-.++++.+.+.+ ++||.++++.
T Consensus 13 ~~~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~--~~pv~~~~~~ 89 (248)
T 1geq_A 13 AGDPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHS--STPIVLMTYY 89 (248)
T ss_dssp TTSSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTC--CCCEEEEECH
T ss_pred CCCCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhC--CCCEEEEecc
Confidence 4567778888999988888 9998766 222221 1124444566777776654 4688776642
Q ss_pred CCH--HHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHhc-CCCE
Q 018443 134 NST--REAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMAQ-SPNL 209 (356)
Q Consensus 134 ~st--~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~P~~tG~~ls~~~l~~La~-~pni 209 (356)
+.. ....+.++.+.++|||++.+. ... .++...+.+.+.+. ..+++-=.| .-+.+.+..+.+ .+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~Gad~v~~~--~~~---~~~~~~~~~~~~~~g~~~~~~i~~-----~t~~e~~~~~~~~~d~~ 159 (248)
T 1geq_A 90 NPIYRAGVRNFLAEAKASGVDGILVV--DLP---VFHAKEFTEIAREEGIKTVFLAAP-----NTPDERLKVIDDMTTGF 159 (248)
T ss_dssp HHHHHHCHHHHHHHHHHHTCCEEEET--TCC---GGGHHHHHHHHHHHTCEEEEEECT-----TCCHHHHHHHHHHCSSE
T ss_pred chhhhcCHHHHHHHHHHCCCCEEEEC--CCC---hhhHHHHHHHHHHhCCCeEEEECC-----CCHHHHHHHHHhcCCCe
Confidence 211 112467888889999999984 221 12333333333333 233222122 124566777764 4445
Q ss_pred EEE---------eecC-ch--hh---HhhhhCCCeEEEecCcc-hhHhHHHHcCCceeeccccc
Q 018443 210 AGV---------KECV-GN--DR---VEHYTGNGIVVWSGNDD-QCHDARWNHGATGVISVTSN 257 (356)
Q Consensus 210 vGi---------K~s~-~d--~~---i~~~~~~~~~v~~G~d~-~~l~~~l~~Ga~G~is~~~n 257 (356)
+.+ |... .+ .. +++..+-.+.+-.|-.. .-....+..|++|++.|++-
T Consensus 160 i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~~~pi~~~GGI~~~e~i~~~~~~Gad~vivGsai 223 (248)
T 1geq_A 160 VYLVSLYGTTGAREEIPKTAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLKEGANGVVVGSAL 223 (248)
T ss_dssp EEEECCC-------CCCHHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred EEEEECCccCCCCCCCChhHHHHHHHHHhhcCCCEEEEeecCCHHHHHHHHHcCCCEEEEcHHH
Confidence 433 1100 11 12 22222223333334433 22334458899999988653
No 192
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=87.42 E-value=8.5 Score=38.18 Aligned_cols=106 Identities=9% Similarity=0.008 Sum_probs=72.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec---CCCCHHHHHHHHHHHHHcC
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT---GSNSTREAIHATEQGFAVG 150 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv---g~~st~~ai~lar~a~~~G 150 (356)
-.+..+..++..+++|++.+-+..++.+.. .-...++.+.+ .+..+-+-++. .-.+.+..++.++.+.++|
T Consensus 98 ~ddv~~~~v~~a~~~Gvd~i~if~~~sd~~-----ni~~~i~~ak~-~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~G 171 (464)
T 2nx9_A 98 ADDVVDTFVERAVKNGMDVFRVFDAMNDVR-----NMQQALQAVKK-MGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELG 171 (464)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEECCTTCCTH-----HHHHHHHHHHH-TTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTT
T ss_pred cchhhHHHHHHHHhCCcCEEEEEEecCHHH-----HHHHHHHHHHH-CCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCC
Confidence 345578889999999999999999988872 22233333332 22222222322 1226889999999999999
Q ss_pred CCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEe
Q 018443 151 MHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYN 186 (356)
Q Consensus 151 adavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn 186 (356)
||.+.+.- ..+..++.++.+.++++.+. .||-++-
T Consensus 172 ad~I~l~D-T~G~~~P~~v~~lv~~l~~~~~~~i~~H~ 208 (464)
T 2nx9_A 172 VDSIALKD-MAGILTPYAAEELVSTLKKQVDVELHLHC 208 (464)
T ss_dssp CSEEEEEE-TTSCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CCEEEEcC-CCCCcCHHHHHHHHHHHHHhcCCeEEEEE
Confidence 99877643 45667889999999998876 5665553
No 193
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=87.40 E-value=2.7 Score=38.36 Aligned_cols=36 Identities=22% Similarity=0.246 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHH
Q 018443 77 AYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVN 119 (356)
Q Consensus 77 ~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~ 119 (356)
++++.++.+.+.|++|+++.. |..||..++.+.+.+
T Consensus 104 G~e~F~~~~~~aGvdG~IipD-------LP~eE~~~~~~~~~~ 139 (252)
T 3tha_A 104 GLEKFVKKAKSLGICALIVPE-------LSFEESDDLIKECER 139 (252)
T ss_dssp CHHHHHHHHHHTTEEEEECTT-------CCGGGCHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHHHHH
Confidence 467777777788888887765 566666666555544
No 194
>3bld_A Queuine tRNA-ribosyltransferase; TGT, PREQ1, glycosyltransferase, metal-binding, queuosine biosynthesis, tRNA processing; HET: PRF; 1.19A {Zymomonas mobilis} PDB: 3bl3_A* 1ozq_A* 1ozm_A* 1r5y_A* 1enu_A* 1f3e_A* 1k4h_A* 1n2v_A* 1p0b_A* 1p0d_A 1p0e_A* 1pud_A 1q2r_A* 1q2s_A* 1q4w_A* 1q63_A* 1q65_A* 1q66_A* 1k4g_A* 1s38_A* ...
Probab=87.34 E-value=1.7 Score=42.23 Aligned_cols=81 Identities=17% Similarity=0.226 Sum_probs=62.4
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEcc-CcccccCCCHHHHHHHHHHHHHHhCCCcEE-EEecCCCCHHHHHHHHHHHH
Q 018443 70 DGRFDLEAYDDLVNMQIVNGAEGMIVGG-TTGEGQLMSWDEHIMLIGHTVNCFGASVKV-IGNTGSNSTREAIHATEQGF 147 (356)
Q Consensus 70 dg~ID~~~l~~~v~~li~~Gv~Gl~v~G-stGE~~~Lt~eEr~~li~~~~~~~~grvpV-i~gvg~~st~~ai~lar~a~ 147 (356)
.|..+.+--++-++.+.+.+.+|+.+.| +.|| +.+|..++++.+....+...|. +.|+| +..+.++ +.
T Consensus 203 QGg~~~dLR~~sa~~l~~~~~~GyaIGGlsvge----~~~~~~~~l~~~~~~LP~~kPRylmGvg--~P~~il~----~V 272 (386)
T 3bld_A 203 QGSVFENLRQQSADALAEIGFDGYAVGGLAGGE----GQDEMFRVLDFSVPMLPDDKPHYLMGVG--KPDDIVG----AV 272 (386)
T ss_dssp CCTTCHHHHHHHHHHHHHHCCSEEEECSCSSSS----CHHHHHHHHHHHGGGSCTTSCEEETTCC--CHHHHHH----HH
T ss_pred cCCCCHHHHHHHHHHHHhcCCCCeeEcCcccCC----CHHHHHHHHHHHHhhCCCCCcEEEeCCC--CHHHHHH----HH
Confidence 6888888888889999999999999999 8888 7899999999999988877775 45888 3555554 45
Q ss_pred HcCCCEEEEcCCC
Q 018443 148 AVGMHAALHINPY 160 (356)
Q Consensus 148 ~~Gadavlv~pP~ 160 (356)
+.|+|-.=..-|.
T Consensus 273 ~~GvDmFDcv~pt 285 (386)
T 3bld_A 273 ERGIDMFDCVLPT 285 (386)
T ss_dssp TTTCCEEC-----
T ss_pred HcCCCEEeCcHHH
Confidence 6899977666554
No 195
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=87.34 E-value=3.9 Score=39.20 Aligned_cols=70 Identities=21% Similarity=0.113 Sum_probs=45.8
Q ss_pred HHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHH----HHHHHHhCC-----CcEEEEecCCCCHHHHHHHHHHHHHcC
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLI----GHTVNCFGA-----SVKVIGNTGSNSTREAIHATEQGFAVG 150 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li----~~~~~~~~g-----rvpVi~gvg~~st~~ai~lar~a~~~G 150 (356)
++++.++++|++++.+.-+.|. .||.++..+.+ +.+++.++. .+|+|..+.+. . .+.....+.|
T Consensus 201 ~y~~~qi~aGad~i~ifDs~~~--~Lsp~~f~ef~~Py~k~i~~~l~~~~~g~~~pvi~f~~g~--~---~~l~~l~~~g 273 (368)
T 4exq_A 201 AYLNAQIEAGAQAVMIFDTWGG--ALADGAYQRFSLDYIRRVVAQLKREHDGARVPAIAFTKGG--G---LWLEDLAATG 273 (368)
T ss_dssp HHHHHHHHHTCSEEEEEETTGG--GSCTTHHHHHTHHHHHHHHHTSCCEETTEECCEEEEETTC--G---GGHHHHHTSS
T ss_pred HHHHHHHHhCCCEEEEeCCccc--cCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCcEEEEcCCc--H---HHHHHHHHhC
Confidence 3444568899999998877764 78988877764 344555554 37887655432 1 2334456788
Q ss_pred CCEEEE
Q 018443 151 MHAALH 156 (356)
Q Consensus 151 adavlv 156 (356)
+|++.+
T Consensus 274 ~d~i~~ 279 (368)
T 4exq_A 274 VDAVGL 279 (368)
T ss_dssp CSEEEC
T ss_pred CCEEee
Confidence 888764
No 196
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=87.28 E-value=4.5 Score=40.40 Aligned_cols=68 Identities=13% Similarity=0.244 Sum_probs=48.6
Q ss_pred HHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEc
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~ 157 (356)
.+.++.++++|++.+.+..+.|. .+.-.+.++.+.+..+ ++||++|-.. + .+.++.+.++|||++.+.
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~g~-----~~~~~~~i~~ir~~~p-~~~Vi~g~v~-t----~e~a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSHGH-----SEGVLQRIRETRAAYP-HLEIIGGNVA-T----AEGARALIEAGVSAVKVG 300 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTT-----SHHHHHHHHHHHHHCT-TCCEEEEEEC-S----HHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhccCceEEecccccc-----chHHHHHHHHHHHHCC-CceEEEcccC-c----HHHHHHHHHhCCCEEEEC
Confidence 45567778899999998877763 2445567777777663 6799886322 2 255788889999999974
No 197
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=87.24 E-value=3.6 Score=39.02 Aligned_cols=93 Identities=12% Similarity=0.025 Sum_probs=55.9
Q ss_pred HHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec---CCCCHHHHHHHHHHHHHcCCCEEE
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT---GSNSTREAIHATEQGFAVGMHAAL 155 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv---g~~st~~ai~lar~a~~~Gadavl 155 (356)
.+.++...++|++++.+.-+..|. ++-.+.++.+.+. .+.++..+ ...+.+..++.++.+.+.|++.+.
T Consensus 96 ~~~i~~a~~aGvd~v~I~~~~s~~-----~~~~~~i~~ak~~---G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~ 167 (345)
T 1nvm_A 96 VHDLKNAYQAGARVVRVATHCTEA-----DVSKQHIEYARNL---GMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIY 167 (345)
T ss_dssp HHHHHHHHHHTCCEEEEEEETTCG-----GGGHHHHHHHHHH---TCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHhCCcCEEEEEEeccHH-----HHHHHHHHHHHHC---CCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEE
Confidence 346777777888888776555443 3444455444432 22344333 344566777777777777877665
Q ss_pred EcCCCCCCCCHHHHHHHHHHHHhcC
Q 018443 156 HINPYYGKTSLEGLISHFDSVLSMG 180 (356)
Q Consensus 156 v~pP~y~~~s~~~l~~y~~~va~~~ 180 (356)
+.- ..+..+++++.+.++++.+..
T Consensus 168 l~D-T~G~~~P~~v~~lv~~l~~~~ 191 (345)
T 1nvm_A 168 MAD-SGGAMSMNDIRDRMRAFKAVL 191 (345)
T ss_dssp EEC-TTCCCCHHHHHHHHHHHHHHS
T ss_pred ECC-CcCccCHHHHHHHHHHHHHhc
Confidence 543 344456677777777776653
No 198
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=87.22 E-value=1.1 Score=41.42 Aligned_cols=83 Identities=10% Similarity=-0.006 Sum_probs=57.9
Q ss_pred CHHHHHHHHHHHHH-CCCCEEEEccCcc------cccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHH
Q 018443 74 DLEAYDDLVNMQIV-NGAEGMIVGGTTG------EGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQG 146 (356)
Q Consensus 74 D~~~l~~~v~~li~-~Gv~Gl~v~GstG------E~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a 146 (356)
+.+.+.+.++.+.+ .|+++|-++-++- -.+.-+.+.-.++++.+.+.+ .+||++-+... ..+..+.++.+
T Consensus 109 ~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~--~~pv~vk~~~~-~~~~~~~a~~l 185 (311)
T 1ep3_A 109 EEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVS--KVPLYVKLSPN-VTDIVPIAKAV 185 (311)
T ss_dssp SHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHC--SSCEEEEECSC-SSCSHHHHHHH
T ss_pred CHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhc--CCCEEEEECCC-hHHHHHHHHHH
Confidence 57889999998887 8999997754321 111124455577777777665 47888865432 23456778999
Q ss_pred HHcCCCEEEEcCC
Q 018443 147 FAVGMHAALHINP 159 (356)
Q Consensus 147 ~~~Gadavlv~pP 159 (356)
+++|+|++.+...
T Consensus 186 ~~~G~d~i~v~~~ 198 (311)
T 1ep3_A 186 EAAGADGLTMINT 198 (311)
T ss_dssp HHTTCSEEEECCC
T ss_pred HHcCCCEEEEeCC
Confidence 9999999999753
No 199
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=87.17 E-value=2.6 Score=36.30 Aligned_cols=88 Identities=16% Similarity=0.159 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHCCCCEEEEcc--CcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEE
Q 018443 77 AYDDLVNMQIVNGAEGMIVGG--TTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAA 154 (356)
Q Consensus 77 ~l~~~v~~li~~Gv~Gl~v~G--stGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadav 154 (356)
...+.++.+...|+..+++.| .+|...-+. .+.+....+.. ++|+|+..|..+.++..+.. +.|+|++
T Consensus 131 ~~~~~i~~~~~~~~~~vli~~~~~~g~~~g~~----~~~i~~~~~~~--~~Pvia~~g~~~~~~~~~~~----~~G~~~~ 200 (237)
T 3cwo_X 131 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYD----TEMIRFVRPLT--TLPIIASGGAGKMEHFLEAF----LAGADAA 200 (237)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTTTCCSCCC----HHHHHHHGGGC--CSCEEEESCCCSHHHHHHHH----HHTCSEE
T ss_pred CHHHHHHHHhhcCCCeEEEEecCCCCcccccc----HHHHHHHHHhc--CCCEEecCCCCCHHHHHHHH----HcCcHHH
Confidence 346667777778888888776 556555554 34444444332 68999988777777666553 4699999
Q ss_pred EEcCCCCC-CCCHHHHHHHHH
Q 018443 155 LHINPYYG-KTSLEGLISHFD 174 (356)
Q Consensus 155 lv~pP~y~-~~s~~~l~~y~~ 174 (356)
++..-.|. +.+.+++.++.+
T Consensus 201 ~vg~a~~~~~~~~~~~~~~l~ 221 (237)
T 3cwo_X 201 LAASVFHFREIDVRELKEYLK 221 (237)
T ss_dssp EESHHHHTTSSCHHHHHHHHH
T ss_pred hhhHHHHcCCCCHHHHHHHHH
Confidence 99887754 457788877654
No 200
>2ash_A Queuine tRNA-ribosyltransferase; TM1561, tRNA-guanine, struc genomics, joint center for structural genomics, JCSG; 1.90A {Thermotoga maritima}
Probab=87.00 E-value=2 Score=41.60 Aligned_cols=80 Identities=16% Similarity=0.172 Sum_probs=65.5
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEcc-CcccccCCCHHHHHHHHHHHHHHhCCCcEE-EEecCCCCHHHHHHHHHHHH
Q 018443 70 DGRFDLEAYDDLVNMQIVNGAEGMIVGG-TTGEGQLMSWDEHIMLIGHTVNCFGASVKV-IGNTGSNSTREAIHATEQGF 147 (356)
Q Consensus 70 dg~ID~~~l~~~v~~li~~Gv~Gl~v~G-stGE~~~Lt~eEr~~li~~~~~~~~grvpV-i~gvg~~st~~ai~lar~a~ 147 (356)
.|..+.+--++-++.+.+.+.+|+.+.| +.|| +.+|..++++.+.+..+...|. +.|+|. ..+.+ .+.
T Consensus 196 QGg~~~dLR~~sa~~l~~~~~~GyaIGGlsvGe----~~~~~~~~l~~~~~~LP~~kPRyLmGvG~--P~~il----~~V 265 (381)
T 2ash_A 196 QGGIYPDLRRESALQLTSIGFDGYAIGGLSIGE----ERSLTLEMTEVTVEFLPEDKPRYFMGGGS--PELIL----ELV 265 (381)
T ss_dssp CCTTCHHHHHHHHHHHHTTCCSEEEECSCSSSS----CHHHHHHHHHHHHTTSCTTSCEEECSCCC--HHHHH----HHH
T ss_pred cCCCCHHHHHHHHHHHHhcCCceEEecCcccCC----CHHHHHHHHHHHHhhCCCCCcEEEcCCCC--HHHHH----HHH
Confidence 6888888888889999999999999999 7888 7899999999999888877774 568874 55544 456
Q ss_pred HcCCCEEEEcCC
Q 018443 148 AVGMHAALHINP 159 (356)
Q Consensus 148 ~~Gadavlv~pP 159 (356)
+.|+|-.=..-|
T Consensus 266 ~~GvDmFDcv~P 277 (381)
T 2ash_A 266 DRGVDMFDSVFP 277 (381)
T ss_dssp TTTCCEEEESHH
T ss_pred HcCCCEEeCChh
Confidence 789998877655
No 201
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=86.98 E-value=1.5 Score=39.16 Aligned_cols=103 Identities=16% Similarity=0.218 Sum_probs=59.0
Q ss_pred HHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 159 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP 159 (356)
..++..++.|++++...++. ..+++.+.+ . ..+++.|+. +..| ++.|.+.|+|.+.+.|
T Consensus 80 d~~~~A~~aGAd~v~~p~~d-----------~~v~~~ar~-~--g~~~i~Gv~--t~~e----~~~A~~~Gad~vk~Fp- 138 (224)
T 1vhc_A 80 EQVVLAKSSGADFVVTPGLN-----------PKIVKLCQD-L--NFPITPGVN--NPMA----IEIALEMGISAVKFFP- 138 (224)
T ss_dssp HHHHHHHHHTCSEEECSSCC-----------HHHHHHHHH-T--TCCEECEEC--SHHH----HHHHHHTTCCEEEETT-
T ss_pred HHHHHHHHCCCCEEEECCCC-----------HHHHHHHHH-h--CCCEEeccC--CHHH----HHHHHHCCCCEEEEee-
Confidence 46677788899999654432 345555554 2 357777854 3444 4567889999999833
Q ss_pred CCCCCCHHHHHHHHHHHHhcCC-eEEEeCCCCCCCCCCHHHHHHHhcCCCEEEE
Q 018443 160 YYGKTSLEGLISHFDSVLSMGP-TIIYNVPSRTGQDIPPRVIHTMAQSPNLAGV 212 (356)
Q Consensus 160 ~y~~~s~~~l~~y~~~va~~~P-iilYn~P~~tG~~ls~~~l~~La~~pnivGi 212 (356)
...-+-.+|++++....| +=+ . .+| .++++.+.++.+.+++.|+
T Consensus 139 ----a~~~gG~~~lk~l~~~~~~ipv--v--aiG-GI~~~N~~~~l~agga~~v 183 (224)
T 1vhc_A 139 ----AEASGGVKMIKALLGPYAQLQI--M--PTG-GIGLHNIRDYLAIPNIVAC 183 (224)
T ss_dssp ----TTTTTHHHHHHHHHTTTTTCEE--E--EBS-SCCTTTHHHHHTSTTBCCE
T ss_pred ----CccccCHHHHHHHHhhCCCCeE--E--EEC-CcCHHHHHHHHhcCCCEEE
Confidence 111111566666666543 111 1 123 3555666666665544444
No 202
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=86.71 E-value=1.2 Score=41.30 Aligned_cols=114 Identities=13% Similarity=0.181 Sum_probs=82.4
Q ss_pred cCceeE--eeecccC-C-CCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec
Q 018443 56 ALRLIT--AIKTPYL-P-DGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT 131 (356)
Q Consensus 56 ~~Gvi~--al~TPf~-~-dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv 131 (356)
-.|+-+ .+.|-|. + .+..|.+.+.+.++.+.+.|++.|.+.=|.|- +++++..++++.+.+.++ .+|+-++.
T Consensus 131 ~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~---~~P~~~~~lv~~l~~~~~-~~~l~~H~ 206 (295)
T 1ydn_A 131 NDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLGDTIGR---GTPDTVAAMLDAVLAIAP-AHSLAGHY 206 (295)
T ss_dssp HTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEEEETTSC---CCHHHHHHHHHHHHTTSC-GGGEEEEE
T ss_pred HcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEecCCCCC---cCHHHHHHHHHHHHHhCC-CCeEEEEE
Confidence 345433 3555453 2 36789999999999999999999999888885 799999999999988764 46776665
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEc------CCCC----CCCCHHHHHHHHH
Q 018443 132 GSNSTREAIHATEQGFAVGMHAALHI------NPYY----GKTSLEGLISHFD 174 (356)
Q Consensus 132 g~~st~~ai~lar~a~~~Gadavlv~------pP~y----~~~s~~~l~~y~~ 174 (356)
+++.--+++.+..|.++|++.+=+. .||. +..+-++++.+++
T Consensus 207 -Hn~~Gla~an~l~Ai~aG~~~vd~sv~GlG~cp~a~g~~GN~~~e~lv~~l~ 258 (295)
T 1ydn_A 207 -HDTGGRALDNIRVSLEKGLRVFDASVGGLGGCPFAPGAKGNVDTVAVVEMLH 258 (295)
T ss_dssp -BCTTSCHHHHHHHHHHHTCCEEEEBTTCCSCBTTBTTSCCBCBHHHHHHHHH
T ss_pred -CCCcchHHHHHHHHHHhCCCEEEeccccCCCCCCCCCCcCChhHHHHHHHHH
Confidence 3344456677788889999988664 2433 2245566666655
No 203
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=86.70 E-value=1.6 Score=39.16 Aligned_cols=98 Identities=12% Similarity=0.037 Sum_probs=55.0
Q ss_pred EeeecccCCCCCCCH--HHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEE-EecCCCCHH
Q 018443 61 TAIKTPYLPDGRFDL--EAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVI-GNTGSNSTR 137 (356)
Q Consensus 61 ~al~TPf~~dg~ID~--~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi-~gvg~~st~ 137 (356)
..++|++++.+..+. +...++++.-.+.|++|+++.+ | ..+| ++.+.+..+.+.+++ .|++...-
T Consensus 120 v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~a-t------~~~e----~~~ir~~~~~~~~iv~PGI~~~g~- 187 (228)
T 3m47_A 120 VFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPS-T------RPER----LSRLREIIGQDSFLISPGVGAQGG- 187 (228)
T ss_dssp EEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEECCS-S------CHHH----HHHHHHHHCSSSEEEECC-------
T ss_pred eEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEECC-C------ChHH----HHHHHHhcCCCCEEEecCcCcCCC-
Confidence 456888887664433 3345566666679999986543 2 1222 223444555556654 47765321
Q ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHH
Q 018443 138 EAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDS 175 (356)
Q Consensus 138 ~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~ 175 (356)
+ . .+.++|+|.+++-.|.|...++.+..+-+++
T Consensus 188 -~---p-~~~~aGad~iVvGr~I~~a~dp~~a~~~~~~ 220 (228)
T 3m47_A 188 -D---P-GETLRFADAIIVGRSIYLADNPAAAAAGAIE 220 (228)
T ss_dssp --------CGGGTCSEEEECHHHHTSSCHHHHHHHHHH
T ss_pred -C---H-hHHHcCCCEEEECHHHhCCCCHHHHHHHHHH
Confidence 1 3 5668999999998888876666554444433
No 204
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=86.60 E-value=2 Score=40.57 Aligned_cols=114 Identities=17% Similarity=0.067 Sum_probs=86.2
Q ss_pred cCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCC--CcEEEEecCC
Q 018443 56 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA--SVKVIGNTGS 133 (356)
Q Consensus 56 ~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~g--rvpVi~gvg~ 133 (356)
-.|.-+..-.|+ .++.|.+-+.++++.+.+.|++-|.++-|+|= +++++-.++++.+.+.+++ ++++=++. +
T Consensus 133 ~~g~~v~f~~~d--~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~---~~P~~v~~lv~~l~~~~~~~~~~~i~~H~-H 206 (325)
T 3eeg_A 133 KVVHEVEFFCED--AGRADQAFLARMVEAVIEAGADVVNIPDTTGY---MLPWQYGERIKYLMDNVSNIDKAILSAHC-H 206 (325)
T ss_dssp TTSSEEEEEEET--GGGSCHHHHHHHHHHHHHHTCSEEECCBSSSC---CCHHHHHHHHHHHHHHCSCGGGSEEEECB-C
T ss_pred HCCCEEEEEccc--cccchHHHHHHHHHHHHhcCCCEEEecCccCC---cCHHHHHHHHHHHHHhCCCCCceEEEEEe-C
Confidence 345544433342 47899999999999999999999999999986 8999999999999988864 35655544 5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCC----CCCHHHHHHHHHH
Q 018443 134 NSTREAIHATEQGFAVGMHAALHINPYYG----KTSLEGLISHFDS 175 (356)
Q Consensus 134 ~st~~ai~lar~a~~~Gadavlv~pP~y~----~~s~~~l~~y~~~ 175 (356)
++.--++.-+-.|.++|++.+=..---++ .++-++++..++.
T Consensus 207 nd~GlA~AN~laA~~aGa~~vd~tv~GlGer~GN~~lE~vv~~L~~ 252 (325)
T 3eeg_A 207 NDLGLATANSLAALQNGARQVECTINGIGERAGNTALEEVVMAMEC 252 (325)
T ss_dssp CTTSCHHHHHHHHHHHTCCEEEEBGGGCCSTTCCCBHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhCCCEEEEecccccccccchhHHHHHHHHHh
Confidence 67778889999999999999866544332 3455666666554
No 205
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=86.59 E-value=9.2 Score=37.35 Aligned_cols=128 Identities=9% Similarity=-0.065 Sum_probs=77.1
Q ss_pred CCCHHHHHHHHH-------HHHHCCCCEEEEccCccc--------ccC-C------CH-HHHHHHHH----HHHHHh---
Q 018443 72 RFDLEAYDDLVN-------MQIVNGAEGMIVGGTTGE--------GQL-M------SW-DEHIMLIG----HTVNCF--- 121 (356)
Q Consensus 72 ~ID~~~l~~~v~-------~li~~Gv~Gl~v~GstGE--------~~~-L------t~-eEr~~li~----~~~~~~--- 121 (356)
.+..+.+++.++ +.+++|.|||=+.|..|- ... = |. +-|.+++. .+.+.+
T Consensus 159 ~mt~~eI~~ii~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~ 238 (419)
T 3l5a_A 159 AMSHEKINSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKE 238 (419)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhh
Confidence 355555555554 456789999999887541 111 1 22 66665444 444444
Q ss_pred -CCCcEEEEecC---------CCCHHHHHHHHHHHHH-cCCCEEEEcCCCC----CC-----C-CHHHHHHHHHHHHh-c
Q 018443 122 -GASVKVIGNTG---------SNSTREAIHATEQGFA-VGMHAALHINPYY----GK-----T-SLEGLISHFDSVLS-M 179 (356)
Q Consensus 122 -~grvpVi~gvg---------~~st~~ai~lar~a~~-~Gadavlv~pP~y----~~-----~-s~~~l~~y~~~va~-~ 179 (356)
+.+.||.+=++ +.+.++++++++..++ +|+|.+-+....+ +. . ....+.+.+++... .
T Consensus 239 ~~~~f~v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~ 318 (419)
T 3l5a_A 239 APDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGR 318 (419)
T ss_dssp CCTTCEEEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTS
T ss_pred cCCCeeEEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCC
Confidence 34557655433 3468999999999999 9999999887643 11 1 11234444444443 3
Q ss_pred CCeEEEeCCCCCCCCCCHHHHHHHhc
Q 018443 180 GPTIIYNVPSRTGQDIPPRVIHTMAQ 205 (356)
Q Consensus 180 ~PiilYn~P~~tG~~ls~~~l~~La~ 205 (356)
+||+. .|--.+++..+++.+
T Consensus 319 iPVI~------~GgI~t~e~Ae~~L~ 338 (419)
T 3l5a_A 319 IPLIA------SGGINSPESALDALQ 338 (419)
T ss_dssp SCEEE------CSSCCSHHHHHHHGG
T ss_pred CeEEE------ECCCCCHHHHHHHHH
Confidence 67664 344457777777663
No 206
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=86.53 E-value=1.7 Score=39.70 Aligned_cols=87 Identities=15% Similarity=0.106 Sum_probs=52.6
Q ss_pred HHHHHHCCCCEEEE-ccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCC
Q 018443 82 VNMQIVNGAEGMIV-GGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPY 160 (356)
Q Consensus 82 v~~li~~Gv~Gl~v-~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP~ 160 (356)
++...+.|++.++. .|.+|....++..+ .++.+.+.. ++||+++-|=.+.++ ++.+.++|||+|++..-.
T Consensus 140 a~~~~~~gad~v~~~~~~~Gt~~~~~~~~---~l~~i~~~~--~iPviv~gGI~t~ed----a~~~~~~GAdgViVGSAi 210 (264)
T 1xm3_A 140 ARKLEELGVHAIMPGASPIGSGQGILNPL---NLSFIIEQA--KVPVIVDAGIGSPKD----AAYAMELGADGVLLNTAV 210 (264)
T ss_dssp HHHHHHHTCSCBEECSSSTTCCCCCSCHH---HHHHHHHHC--SSCBEEESCCCSHHH----HHHHHHTTCSEEEESHHH
T ss_pred HHHHHHhCCCEEEECCcccCCCCCCCCHH---HHHHHHhcC--CCCEEEEeCCCCHHH----HHHHHHcCCCEEEEcHHH
Confidence 44455668887755 44556554444333 555555533 789988765544555 445567999999999865
Q ss_pred CCCCCH-HHHHHHHHHHH
Q 018443 161 YGKTSL-EGLISHFDSVL 177 (356)
Q Consensus 161 y~~~s~-~~l~~y~~~va 177 (356)
....+. +.+.++.+.+.
T Consensus 211 ~~a~dp~~~~~~l~~~v~ 228 (264)
T 1xm3_A 211 SGADDPVKMARAMKLAVE 228 (264)
T ss_dssp HTSSSHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHH
Confidence 544444 34455555553
No 207
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=86.50 E-value=1.3 Score=41.82 Aligned_cols=102 Identities=16% Similarity=0.127 Sum_probs=63.7
Q ss_pred HHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEc
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~ 157 (356)
+.+.++.+++.|++++.+.+..- .++++.+.+ ..+||++.+. +++.++.+++.|+|++.+.
T Consensus 77 ~~~~~~~a~~~g~d~V~~~~g~p----------~~~i~~l~~---~g~~v~~~v~------~~~~a~~~~~~GaD~i~v~ 137 (332)
T 2z6i_A 77 VEDIVDLVIEEGVKVVTTGAGNP----------SKYMERFHE---AGIIVIPVVP------SVALAKRMEKIGADAVIAE 137 (332)
T ss_dssp HHHHHHHHHHTTCSEEEECSSCG----------GGTHHHHHH---TTCEEEEEES------SHHHHHHHHHTTCSCEEEE
T ss_pred HHHHHHHHHHCCCCEEEECCCCh----------HHHHHHHHH---cCCeEEEEeC------CHHHHHHHHHcCCCEEEEE
Confidence 56788888899999998876421 224444443 2578887773 2456778889999999997
Q ss_pred CCCCCCC-CHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCC-CHHHHHHHhc
Q 018443 158 NPYYGKT-SLEGLISHFDSVLSM--GPTIIYNVPSRTGQDI-PPRVIHTMAQ 205 (356)
Q Consensus 158 pP~y~~~-s~~~l~~y~~~va~~--~PiilYn~P~~tG~~l-s~~~l~~La~ 205 (356)
.+..... .+......++++.+. .||+.= | .+ +++.+.++.+
T Consensus 138 g~~~GG~~g~~~~~~ll~~i~~~~~iPViaa------G-GI~~~~~~~~al~ 182 (332)
T 2z6i_A 138 GMEAGGHIGKLTTMTLVRQVATAISIPVIAA------G-GIADGEGAAAGFM 182 (332)
T ss_dssp CTTSSEECCSSCHHHHHHHHHHHCSSCEEEE------S-SCCSHHHHHHHHH
T ss_pred CCCCCCCCCCccHHHHHHHHHHhcCCCEEEE------C-CCCCHHHHHHHHH
Confidence 6522211 111234566677665 576542 3 34 4777777554
No 208
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=86.42 E-value=3.8 Score=40.24 Aligned_cols=97 Identities=9% Similarity=-0.003 Sum_probs=46.6
Q ss_pred HHHHHHCCCCEEEEccCccccc-----CCCHHHHHHHHHHHHHHhC-CCcEEEEec---CCCCHHHHHHHHHHHHHcCCC
Q 018443 82 VNMQIVNGAEGMIVGGTTGEGQ-----LMSWDEHIMLIGHTVNCFG-ASVKVIGNT---GSNSTREAIHATEQGFAVGMH 152 (356)
Q Consensus 82 v~~li~~Gv~Gl~v~GstGE~~-----~Lt~eEr~~li~~~~~~~~-grvpVi~gv---g~~st~~ai~lar~a~~~Gad 152 (356)
++..+++|++.+-+..+++|.+ ..|.+|-.+.+..+++.+. ....|.++. ...+.+..++.++.+.++|++
T Consensus 116 i~~A~~aG~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~eda~r~d~~~~~~v~~~~~~~Ga~ 195 (423)
T 3ivs_A 116 ARVAVETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSEDSFRSDLVDLLSLYKAVDKIGVN 195 (423)
T ss_dssp HHHHHHTTCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEEEEEESGGGSCHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHcCCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEccCcCCCHHHHHHHHHHHHHhCCC
Confidence 3455566777776666666654 2344444444434444322 233444432 223455666666666666666
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHhc
Q 018443 153 AALHINPYYGKTSLEGLISHFDSVLSM 179 (356)
Q Consensus 153 avlv~pP~y~~~s~~~l~~y~~~va~~ 179 (356)
.+.+. =..+..++.++.+.++.+.+.
T Consensus 196 ~i~l~-DTvG~~~P~~v~~lv~~l~~~ 221 (423)
T 3ivs_A 196 RVGIA-DTVGCATPRQVYDLIRTLRGV 221 (423)
T ss_dssp EEEEE-ETTSCCCHHHHHHHHHHHHHH
T ss_pred ccccC-CccCcCCHHHHHHHHHHHHhh
Confidence 54432 234445566666666666554
No 209
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=86.40 E-value=17 Score=32.26 Aligned_cols=180 Identities=13% Similarity=0.045 Sum_probs=96.0
Q ss_pred CceeEeeecccCCCCCC-CHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec----
Q 018443 57 LRLITAIKTPYLPDGRF-DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT---- 131 (356)
Q Consensus 57 ~Gvi~al~TPf~~dg~I-D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv---- 131 (356)
.|+++-.-. . +++-+ +..-..++...+.+.|+.|+-+++ .+-++.+.+.+ ++||+.-.
T Consensus 18 ~~livscq~-~-~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~~-------------~~~i~~ir~~v--~~Pvig~~k~d~ 80 (232)
T 3igs_A 18 GGLIVSCQP-V-PGSPLDKPEIVAAMALAAEQAGAVAVRIEG-------------IDNLRMTRSLV--SVPIIGIIKRDL 80 (232)
T ss_dssp CCEEEECCC-C-TTCTTCSHHHHHHHHHHHHHTTCSEEEEES-------------HHHHHHHHTTC--CSCEEEECBCCC
T ss_pred CCEEEEEeC-C-CCCCCCCcchHHHHHHHHHHCCCeEEEECC-------------HHHHHHHHHhc--CCCEEEEEeecC
Confidence 356654422 2 22322 355688999999999999997621 23455555544 57986311
Q ss_pred CC--CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCC-CHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHHHhcC-C
Q 018443 132 GS--NSTREAIHATEQGFAVGMHAALHINPYYGKT-SLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHTMAQS-P 207 (356)
Q Consensus 132 g~--~st~~ai~lar~a~~~Gadavlv~pP~y~~~-s~~~l~~y~~~va~~~PiilYn~P~~tG~~ls~~~l~~La~~-p 207 (356)
+. .-.....+.++.+.++|||.|++.......+ ..+++++++++. ..+++ -+. -+.+...++.+. .
T Consensus 81 ~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~--g~~v~-~~v-------~t~eea~~a~~~Ga 150 (232)
T 3igs_A 81 DESPVRITPFLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHH--HLLTM-ADC-------SSVDDGLACQRLGA 150 (232)
T ss_dssp SSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEE-EEC-------CSHHHHHHHHHTTC
T ss_pred CCcceEeCccHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHC--CCEEE-EeC-------CCHHHHHHHHhCCC
Confidence 11 0111234556778899999998876533222 344455544432 13333 232 246666666653 4
Q ss_pred CEEEEeec---------Cchh-hHhhhhCCCeEEEe--cCc--chhHhHHHHcCCceeecccccccHHHHH
Q 018443 208 NLAGVKEC---------VGND-RVEHYTGNGIVVWS--GND--DQCHDARWNHGATGVISVTSNLVPGMMR 264 (356)
Q Consensus 208 nivGiK~s---------~~d~-~i~~~~~~~~~v~~--G~d--~~~l~~~l~~Ga~G~is~~~n~~P~~~~ 264 (356)
.++|+... ..+. .+.+....++.|+. |-. +.+ ...+.+|++|++.|.+-.-|....
T Consensus 151 d~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~~ipvIA~GGI~t~~d~-~~~~~~GadgV~VGsal~~p~~~~ 220 (232)
T 3igs_A 151 DIIGTTMSGYTTPDTPEEPDLPLVKALHDAGCRVIAEGRYNSPALA-AEAIRYGAWAVTVGSAITRLEHIC 220 (232)
T ss_dssp SEEECTTTTSSSSSCCSSCCHHHHHHHHHTTCCEEEESCCCSHHHH-HHHHHTTCSEEEECHHHHCHHHHH
T ss_pred CEEEEcCccCCCCCCCCCCCHHHHHHHHhcCCcEEEECCCCCHHHH-HHHHHcCCCEEEEehHhcCHHHHH
Confidence 56654321 1121 12222211454443 321 223 334688999999987766665443
No 210
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=86.34 E-value=23 Score=33.64 Aligned_cols=124 Identities=9% Similarity=0.005 Sum_probs=90.0
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHHHHHHHHHHcCC
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 151 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai~lar~a~~~Ga 151 (356)
-|.+.+.+.+....+.|.+++=+-... +.++=.++++.+.+.++ ++++.+-+ ++.+.++++++++..++.|+
T Consensus 146 ~~~e~~~~~a~~~~~~Gf~~iKik~g~------~~~~~~e~v~avr~a~g-d~~l~vD~n~~~~~~~a~~~~~~l~~~~i 218 (384)
T 2pgw_A 146 ETAEELARDAAVGHAQGERVFYLKVGR------GEKLDLEITAAVRGEIG-DARLRLDANEGWSVHDAINMCRKLEKYDI 218 (384)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEECCS------CHHHHHHHHHHHHTTST-TCEEEEECTTCCCHHHHHHHHHHHGGGCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECcCC------CHHHHHHHHHHHHHHcC-CcEEEEecCCCCCHHHHHHHHHHHHhcCC
Confidence 477889999999999999998664321 56666788888888887 88887755 45689999999999999999
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEEEeecC
Q 018443 152 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV 216 (356)
Q Consensus 152 davlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~--~pnivGiK~s~ 216 (356)
+.+ -.|+ ...+ .+.+++|.+. .||+.=. .-.+++.++++.+ .-+++.+|-+-
T Consensus 219 ~~i--EqP~-~~~~----~~~~~~l~~~~~iPI~~de------~i~~~~~~~~~i~~~~~d~v~ik~~~ 274 (384)
T 2pgw_A 219 EFI--EQPT-VSWS----IPAMAHVREKVGIPIVADQ------AAFTLYDVYEICRQRAADMICIGPRE 274 (384)
T ss_dssp SEE--ECCS-CTTC----HHHHHHHHHHCSSCEEEST------TCCSHHHHHHHHHTTCCSEEEECHHH
T ss_pred CEE--eCCC-Chhh----HHHHHHHHhhCCCCEEEeC------CcCCHHHHHHHHHcCCCCEEEEcchh
Confidence 865 3454 1112 4456666665 5766432 3347888888874 57899999754
No 211
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=86.31 E-value=2.4 Score=40.48 Aligned_cols=74 Identities=15% Similarity=0.166 Sum_probs=44.5
Q ss_pred HHHHHHHHCCCCEEEEccCcc--cc------cCCCHHHHHHHHHHHHHHhC-CCcEEEE--ecCCCCHHHHHHHHHHHHH
Q 018443 80 DLVNMQIVNGAEGMIVGGTTG--EG------QLMSWDEHIMLIGHTVNCFG-ASVKVIG--NTGSNSTREAIHATEQGFA 148 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstG--E~------~~Lt~eEr~~li~~~~~~~~-grvpVi~--gvg~~st~~ai~lar~a~~ 148 (356)
+.++.+++.|+|+|.+..+.| +. +.... ...+..+.+.++ .++|||+ |+.. -.++ ..|..
T Consensus 173 e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~---~~~l~~v~~~~~~~~ipvIa~GGI~~--g~di----~kAla 243 (351)
T 2c6q_A 173 EMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQ---LSAVMECADAAHGLKGHIISDGGCSC--PGDV----AKAFG 243 (351)
T ss_dssp HHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCH---HHHHHHHHHHHHHTTCEEEEESCCCS--HHHH----HHHHH
T ss_pred HHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccH---HHHHHHHHHHHhhcCCcEEEeCCCCC--HHHH----HHHHH
Confidence 455677899999997743222 11 01111 223333333332 2699999 6653 4443 35678
Q ss_pred cCCCEEEEcCCCCC
Q 018443 149 VGMHAALHINPYYG 162 (356)
Q Consensus 149 ~Gadavlv~pP~y~ 162 (356)
+|||+|++-.|+..
T Consensus 244 lGA~~V~vG~~fl~ 257 (351)
T 2c6q_A 244 AGADFVMLGGMLAG 257 (351)
T ss_dssp TTCSEEEESTTTTT
T ss_pred cCCCceeccHHHhc
Confidence 99999999998764
No 212
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=86.13 E-value=5.1 Score=37.23 Aligned_cols=151 Identities=9% Similarity=0.087 Sum_probs=93.4
Q ss_pred CCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC----------CCCCCCCHHHHHHHHH
Q 018443 105 MSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN----------PYYGKTSLEGLISHFD 174 (356)
Q Consensus 105 Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~p----------P~y~~~s~~~l~~y~~ 174 (356)
||..++..-++...+ .++.-++.++-... .|+.++++|+|++.+.- |-....|-+++..|.+
T Consensus 4 m~~~~~~~~lr~l~~--~~~~i~~~~a~D~~------sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~ 75 (287)
T 3b8i_A 4 ASHHELRAMFRALLD--SSRCYHTASVFDPM------SARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQAT 75 (287)
T ss_dssp CCHHHHHHHHHHHHH--SSCCEECEECCSHH------HHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHH
T ss_pred CChhHHHHHHHHHHh--CCCcEEEecCCCHH------HHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence 677777666655553 34444566766542 35666778999998764 3334578899999999
Q ss_pred HHHhc--CCeEEEeCCCCCCCCCCHHHH----HHHhcCCCEEEEeecCch----------------h---hHhhh----h
Q 018443 175 SVLSM--GPTIIYNVPSRTGQDIPPRVI----HTMAQSPNLAGVKECVGN----------------D---RVEHY----T 225 (356)
Q Consensus 175 ~va~~--~PiilYn~P~~tG~~ls~~~l----~~La~~pnivGiK~s~~d----------------~---~i~~~----~ 225 (356)
.|++. .| ++-|.| +|+. +++.+ .++.+ -++.|||.+.+. + ++++. .
T Consensus 76 ~I~r~~~~P-viaD~d--~Gyg-~~~~~~~~v~~l~~-aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~ 150 (287)
T 3b8i_A 76 RIGRVARLP-VIADAD--HGYG-NALNVMRTVVELER-AGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARV 150 (287)
T ss_dssp HHHTTCSSC-EEEECT--TCSS-SHHHHHHHHHHHHH-HTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCC
T ss_pred HHHhcCCCC-EEEECC--CCCC-CHHHHHHHHHHHHH-hCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCC
Confidence 99987 69 689988 4555 66544 44444 789999977653 1 33322 1
Q ss_pred CCCeEEEecCcc------hhH---hHHHHcCCceeecccccccHHHHHHHHHc
Q 018443 226 GNGIVVWSGNDD------QCH---DARWNHGATGVISVTSNLVPGMMRELMFG 269 (356)
Q Consensus 226 ~~~~~v~~G~d~------~~l---~~~l~~Ga~G~is~~~n~~P~~~~~l~~a 269 (356)
.++|.|..=.|. ..+ .+...+|+++++.-. ---++.+.++.++
T Consensus 151 ~~~~~i~aRtdaa~~gl~~ai~Ra~ay~eAGAd~i~~e~-~~~~~~~~~i~~~ 202 (287)
T 3b8i_A 151 DPALTIIARTNAELIDVDAVIQRTLAYQEAGADGICLVG-VRDFAHLEAIAEH 202 (287)
T ss_dssp STTSEEEEEEETTTSCHHHHHHHHHHHHHTTCSEEEEEC-CCSHHHHHHHHTT
T ss_pred CCCcEEEEechhhhcCHHHHHHHHHHHHHcCCCEEEecC-CCCHHHHHHHHHh
Confidence 356766432222 011 122367999887542 1124677777654
No 213
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=85.92 E-value=1.6 Score=39.53 Aligned_cols=73 Identities=14% Similarity=0.188 Sum_probs=54.5
Q ss_pred ecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHH
Q 018443 64 KTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHAT 143 (356)
Q Consensus 64 ~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~la 143 (356)
+|=.++|-.++.+.+++ +.++|+|.|.+.||+|- |.+.=.++++.+.+ .++|++.=.++. +.+
T Consensus 15 ~~~~DPdk~~~~~~l~~----~~~~GtDaI~vGgs~gv----t~~~~~~~v~~ik~---~~~Piil~p~~~---~~~--- 77 (235)
T 3w01_A 15 IFKLDPAKHISDDDLDA----ICMSQTDAIMIGGTDDV----TEDNVIHLMSKIRR---YPLPLVLEISNI---ESV--- 77 (235)
T ss_dssp EEEECTTSCCCHHHHHH----HHTSSCSEEEECCSSCC----CHHHHHHHHHHHTT---SCSCEEEECCCS---TTC---
T ss_pred EEeECCCCcCCHHHHHH----HHHcCCCEEEECCcCCc----CHHHHHHHHHHhcC---cCCCEEEecCCH---HHh---
Confidence 34456777778777776 46899999999998876 88888888877765 478998877643 222
Q ss_pred HHHHHcCCCEEEEc
Q 018443 144 EQGFAVGMHAALHI 157 (356)
Q Consensus 144 r~a~~~Gadavlv~ 157 (356)
..|+|++++.
T Consensus 78 ----~~gaD~il~p 87 (235)
T 3w01_A 78 ----MPGFDFYFVP 87 (235)
T ss_dssp ----CTTCSEEEEE
T ss_pred ----hcCCCEEEEc
Confidence 4499999875
No 214
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=85.91 E-value=2.2 Score=39.28 Aligned_cols=90 Identities=14% Similarity=0.093 Sum_probs=57.8
Q ss_pred HHHHHHHHCCCCEEEEccC-cccccCCCHHHHHHHHHHHHHHhCCC-cEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEc
Q 018443 80 DLVNMQIVNGAEGMIVGGT-TGEGQLMSWDEHIMLIGHTVNCFGAS-VKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~Gs-tGE~~~Lt~eEr~~li~~~~~~~~gr-vpVi~gvg~~st~~ai~lar~a~~~Gadavlv~ 157 (356)
.+.+.+.+.|++.+...|+ .|-+.-++. ..+++.+++.. .+ +|||++-|=.+.++ +..|.++|||+|++-
T Consensus 136 ~~ak~l~~~G~~aVmPlg~pIGsG~Gi~~---~~~L~~i~~~~-~~~vPVI~~GGI~tpsD----Aa~AmeLGAdgVlVg 207 (268)
T 2htm_A 136 VLAKRLAALGTATVMPLAAPIGSGWGVRT---RALLELFAREK-ASLPPVVVDAGLGLPSH----AAEVMELGLDAVLVN 207 (268)
T ss_dssp HHHHHHHHHTCSCBEEBSSSTTTCCCSTT---HHHHHHHHHTT-TTSSCBEEESCCCSHHH----HHHHHHTTCCEEEES
T ss_pred HHHHHHHhcCCCEEEecCccCcCCcccCC---HHHHHHHHHhc-CCCCeEEEeCCCCCHHH----HHHHHHcCCCEEEEC
Confidence 3344445569999988675 444555544 33355666522 35 89998766555554 456788999999998
Q ss_pred CCCCCCCCHHHHHHHHHHHH
Q 018443 158 NPYYGKTSLEGLISHFDSVL 177 (356)
Q Consensus 158 pP~y~~~s~~~l~~y~~~va 177 (356)
.=.....++..+.+-|..-.
T Consensus 208 SAI~~a~dP~~ma~af~~Av 227 (268)
T 2htm_A 208 TAIAEAQDPPAMAEAFRLAV 227 (268)
T ss_dssp HHHHTSSSHHHHHHHHHHHH
T ss_pred hHHhCCCCHHHHHHHHHHHH
Confidence 76555455666666665543
No 215
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=85.74 E-value=5.3 Score=38.67 Aligned_cols=24 Identities=25% Similarity=0.194 Sum_probs=20.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEc
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVG 96 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~ 96 (356)
-|.+...+++++..+.|++.+.++
T Consensus 157 ~d~~~~~~~~~ra~~~G~~al~it 180 (392)
T 2nzl_A 157 KDREVTKKLVRQAEKMGYKAIFVT 180 (392)
T ss_dssp SSHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEe
Confidence 378889999999989999998773
No 216
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=85.65 E-value=14 Score=35.04 Aligned_cols=145 Identities=11% Similarity=0.052 Sum_probs=99.1
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHHHHHHHHHHcCC
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 151 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai~lar~a~~~Ga 151 (356)
.|.+.+.+.+....+.|.+++=+-...+ +.++=.++++.+.+.++.++++.+-+ ++.+.++++++++..++.|+
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~-----~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i 219 (371)
T 2ovl_A 145 LPVADLKTQADRFLAGGFRAIKMKVGRP-----DLKEDVDRVSALREHLGDSFPLMVDANMKWTVDGAIRAARALAPFDL 219 (371)
T ss_dssp SCHHHHHHHHHHHHHTTCSCEEEECCCS-----SHHHHHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHHHHHHHGGGCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCC-----CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCC
Confidence 4788899999999999999986654332 45666788888888888888988765 45589999999999999999
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEEEeecC--chh---hHh
Q 018443 152 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV--GND---RVE 222 (356)
Q Consensus 152 davlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~--~pnivGiK~s~--~d~---~i~ 222 (356)
+.+ --|. .+.+ .+.++++.+. .||+.=. .-.+++.++++.+ .-+++-+|-+- +-. ++.
T Consensus 220 ~~i--EqP~--~~~d---~~~~~~l~~~~~iPI~~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~ 286 (371)
T 2ovl_A 220 HWI--EEPT--IPDD---LVGNARIVRESGHTIAGGE------NLHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRKVA 286 (371)
T ss_dssp SEE--ECCS--CTTC---HHHHHHHHHHHCSCEEECT------TCCSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHHHH
T ss_pred CEE--ECCC--Cccc---HHHHHHHHhhCCCCEEeCC------CCCCHHHHHHHHHcCCCCEEeeCccccCCHHHHHHHH
Confidence 865 3453 1111 4455666664 5776543 2356888888863 57888899764 222 333
Q ss_pred hhh-CCCeEEEecC
Q 018443 223 HYT-GNGIVVWSGN 235 (356)
Q Consensus 223 ~~~-~~~~~v~~G~ 235 (356)
++. ..++.++.|.
T Consensus 287 ~~A~~~gi~~~~h~ 300 (371)
T 2ovl_A 287 ALAEANNMLLTSHG 300 (371)
T ss_dssp HHHHHTTCCEEECS
T ss_pred HHHHHcCCeEcccc
Confidence 322 2455665554
No 217
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=85.53 E-value=11 Score=36.05 Aligned_cols=159 Identities=15% Similarity=0.079 Sum_probs=93.3
Q ss_pred HHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 159 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP 159 (356)
+++..+...|-=|++ . -.+|.+|..+.++.+.+. ++..|-++++.. .+..+.++.+.++|+|.+.+-..
T Consensus 61 ~lA~avA~aGGlg~i--~-----~~~s~e~~~~~i~~vk~~--~~l~vga~vg~~--~~~~~~~~~lieaGvd~I~idta 129 (366)
T 4fo4_A 61 RLAIALAQEGGIGFI--H-----KNMSIEQQAAQVHQVKIS--GGLRVGAAVGAA--PGNEERVKALVEAGVDVLLIDSS 129 (366)
T ss_dssp HHHHHHHHTTCEEEE--C-----SSSCHHHHHHHHHHHHTT--TSCCCEEECCSC--TTCHHHHHHHHHTTCSEEEEECS
T ss_pred HHHHHHHHcCCceEe--e-----cCCCHHHHHHHHHHHHhc--CceeEEEEeccC--hhHHHHHHHHHhCCCCEEEEeCC
Confidence 566666666655554 2 147999999988877754 355566666542 35677888899999999887432
Q ss_pred CCCCCCHHHHHHHHHHHHhc---CCeEEEeCCCCCCCCCCHHHHHHHhcCCCEEEEeec--Cc------------hhh--
Q 018443 160 YYGKTSLEGLISHFDSVLSM---GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKEC--VG------------NDR-- 220 (356)
Q Consensus 160 ~y~~~s~~~l~~y~~~va~~---~PiilYn~P~~tG~~ls~~~l~~La~~pnivGiK~s--~~------------d~~-- 220 (356)
.- ..+...+..+.+.+. .|++.-| ..+++...++.+. .+-+||.. .+ .+.
T Consensus 130 ~G---~~~~~~~~I~~ik~~~p~v~Vi~G~-------v~t~e~A~~a~~a-GAD~I~vG~gpGs~~~tr~~~g~g~p~~~ 198 (366)
T 4fo4_A 130 HG---HSEGVLQRIRETRAAYPHLEIIGGN-------VATAEGARALIEA-GVSAVKVGIGPGSICTTRIVTGVGVPQIT 198 (366)
T ss_dssp CT---TSHHHHHHHHHHHHHCTTCEEEEEE-------ECSHHHHHHHHHH-TCSEEEECSSCSTTBCHHHHHCCCCCHHH
T ss_pred CC---CCHHHHHHHHHHHHhcCCCceEeee-------eCCHHHHHHHHHc-CCCEEEEecCCCCCCCcccccCcccchHH
Confidence 21 124566667777665 3566533 4678888887753 22333431 00 011
Q ss_pred ----Hhhhh-CCCeEEEe--cC-cchhHhHHHHcCCceeecccccccH
Q 018443 221 ----VEHYT-GNGIVVWS--GN-DDQCHDARWNHGATGVISVTSNLVP 260 (356)
Q Consensus 221 ----i~~~~-~~~~~v~~--G~-d~~~l~~~l~~Ga~G~is~~~n~~P 260 (356)
+.+.. ..++.|+. |- +..-+..++.+|++|++.++..+..
T Consensus 199 ~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~f~~t 246 (366)
T 4fo4_A 199 AIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGT 246 (366)
T ss_dssp HHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTB
T ss_pred HHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhcC
Confidence 11111 22455555 43 1122234589999999888765543
No 218
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=85.52 E-value=3.5 Score=36.73 Aligned_cols=75 Identities=8% Similarity=0.018 Sum_probs=48.6
Q ss_pred HHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEc
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~ 157 (356)
..++++.+.+.|++.+.+..-.+.+. ....-.++++.+.+.+ ++||+++-+-.+.++ ++.+.+.|||+|++.
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d~~~~~~--~~~~~~~~i~~i~~~~--~ipvi~~ggI~~~~~----~~~~~~~Gad~V~lg 103 (253)
T 1thf_D 32 PVELGKFYSEIGIDELVFLDITASVE--KRKTMLELVEKVAEQI--DIPFTVGGGIHDFET----ASELILRGADKVSIN 103 (253)
T ss_dssp HHHHHHHHHHTTCCEEEEEESSCSSS--HHHHHHHHHHHHHTTC--CSCEEEESSCCSHHH----HHHHHHTTCSEEEES
T ss_pred HHHHHHHHHHcCCCEEEEECCchhhc--CCcccHHHHHHHHHhC--CCCEEEeCCCCCHHH----HHHHHHcCCCEEEEC
Confidence 34556778899999998876555432 2223344445444432 689999766665544 556667899999886
Q ss_pred CCC
Q 018443 158 NPY 160 (356)
Q Consensus 158 pP~ 160 (356)
...
T Consensus 104 ~~~ 106 (253)
T 1thf_D 104 TAA 106 (253)
T ss_dssp HHH
T ss_pred hHH
Confidence 543
No 219
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=85.35 E-value=20 Score=31.99 Aligned_cols=133 Identities=8% Similarity=-0.011 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecC--------CCC-------HHHHHH
Q 018443 77 AYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTG--------SNS-------TREAIH 141 (356)
Q Consensus 77 ~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg--------~~s-------t~~ai~ 141 (356)
.+...++.+.+.|.+||=+.... ...++.++..++-+.+.+ . .+.+.++.+ +.+ .+...+
T Consensus 18 ~~~~~l~~~~~~G~~~vEl~~~~--~~~~~~~~~~~~~~~l~~-~--gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~ 92 (294)
T 3vni_A 18 DYKYYIEKVAKLGFDILEIAASP--LPFYSDIQINELKACAHG-N--GITLTVGHGPSAEQNLSSPDPDIRKNAKAFYTD 92 (294)
T ss_dssp CHHHHHHHHHHHTCSEEEEESTT--GGGCCHHHHHHHHHHHHH-T--TCEEEEEECCCGGGCTTCSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEecCcc--cCCcCHHHHHHHHHHHHH-c--CCeEEEeecCCCCcCCCCCCHHHHHHHHHHHHH
Confidence 46777777888899999665542 455677777776655543 3 355554221 112 234455
Q ss_pred HHHHHHHcCCCEEEE-cCCCC----C-CCCH----HHHHHHHHHHHhc-----CCeEEEeCCCCCCC-CCCHHHHHHHhc
Q 018443 142 ATEQGFAVGMHAALH-INPYY----G-KTSL----EGLISHFDSVLSM-----GPTIIYNVPSRTGQ-DIPPRVIHTMAQ 205 (356)
Q Consensus 142 lar~a~~~Gadavlv-~pP~y----~-~~s~----~~l~~y~~~va~~-----~PiilYn~P~~tG~-~ls~~~l~~La~ 205 (356)
.++.|+++|+..+.+ +.|.+ . ..+. +.+.+.++.+++. +.+.+-|.+...+. .-+++.+.+|.+
T Consensus 93 ~i~~a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~~~~l~~ 172 (294)
T 3vni_A 93 LLKRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFENYLINTAQEGVDFVK 172 (294)
T ss_dssp HHHHHHHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCTTTCSSCCSHHHHHHHHH
T ss_pred HHHHHHHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcccCcccCCHHHHHHHHH
Confidence 678888999999874 33322 1 2232 4456666666653 46777776543232 235777777763
Q ss_pred ---CCCEEEEee
Q 018443 206 ---SPNLAGVKE 214 (356)
Q Consensus 206 ---~pnivGiK~ 214 (356)
.||+.-.=|
T Consensus 173 ~v~~~~vg~~~D 184 (294)
T 3vni_A 173 QVDHNNVKVMLD 184 (294)
T ss_dssp HHCCTTEEEEEE
T ss_pred HcCCCCEEEEEE
Confidence 577543334
No 220
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=85.18 E-value=4.9 Score=38.44 Aligned_cols=74 Identities=11% Similarity=0.144 Sum_probs=52.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccc----------------------------------------ccCCCHHHHHHH
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGE----------------------------------------GQLMSWDEHIML 113 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE----------------------------------------~~~Lt~eEr~~l 113 (356)
|.+..++++++..++|+.+|++.--+-- -..+|++.
T Consensus 133 d~~~~~~l~~ra~~aG~~alvlTvD~p~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~w~~---- 208 (352)
T 3sgz_A 133 DWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILKAALRALKEEKPTQSVPVLFPKASFCWND---- 208 (352)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHHHHSCHHHHTTCC---------------CCCTTCCHHH----
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCCCCCcchhhhhcCCCCCcccchhhhcccccccccchhhhhccCCCCCHHH----
Confidence 7889999999999999999887432211 13455554
Q ss_pred HHHHHHHhCCCcEEEE-ecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Q 018443 114 IGHTVNCFGASVKVIG-NTGSNSTREAIHATEQGFAVGMHAALHINP 159 (356)
Q Consensus 114 i~~~~~~~~grvpVi~-gvg~~st~~ai~lar~a~~~Gadavlv~pP 159 (356)
++.+.+.+ ++||++ ++ .+ .+.++.+.++|+|+|.+...
T Consensus 209 i~~lr~~~--~~PvivK~v--~~----~e~A~~a~~~GaD~I~vsn~ 247 (352)
T 3sgz_A 209 LSLLQSIT--RLPIILKGI--LT----KEDAELAMKHNVQGIVVSNH 247 (352)
T ss_dssp HHHHHHHC--CSCEEEEEE--CS----HHHHHHHHHTTCSEEEECCG
T ss_pred HHHHHHhc--CCCEEEEec--Cc----HHHHHHHHHcCCCEEEEeCC
Confidence 44555554 568876 45 23 46688999999999999863
No 221
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=85.12 E-value=24 Score=32.80 Aligned_cols=121 Identities=13% Similarity=0.147 Sum_probs=73.7
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEc-cC---cccccCCCHHHHHHHHHHHHHHhCCCcEEEEecC--------CCCHHHHH
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVG-GT---TGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTG--------SNSTREAI 140 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~-Gs---tGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg--------~~st~~ai 140 (356)
-+.+.++..+..+.+.|++.|+++ |- .|+.......| |++.+.+. + ..- +|+. +.+.+.-+
T Consensus 94 ~~~~~l~~~L~~~~~~GI~nILaLrGDpp~~~~~~~~~A~d---Lv~~ir~~-~-~f~--IgvA~yPE~Hp~a~~~~~d~ 166 (304)
T 3fst_A 94 ATPDELRTIARDYWNNGIRHIVALRGDLPPGSGKPEMYASD---LVTLLKEV-A-DFD--ISVAAYPEVHPEAKSAQADL 166 (304)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECCCCC------CCCHHH---HHHHHHHH-C-CCE--EEEEECTTCCTTCSCHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCCCCCCCCCCHHH---HHHHHHHc-C-CCe--EEEEeCCCcCCCCCCHHHHH
Confidence 689999999999999999999876 32 12233344444 44443333 2 222 2332 33566566
Q ss_pred HHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc---CCeEEEeCCC-----------CCCCCCCHHHHHHHh
Q 018443 141 HATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM---GPTIIYNVPS-----------RTGQDIPPRVIHTMA 204 (356)
Q Consensus 141 ~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~---~PiilYn~P~-----------~tG~~ls~~~l~~La 204 (356)
+..++=.++|||.++-. ++| +.+.+.+|.+.+.+. .||+.==.|- .+|..+|.+++++|.
T Consensus 167 ~~Lk~KvdAGAdf~iTQ-~ff---D~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~~~~~Gv~iP~~l~~~l~ 240 (304)
T 3fst_A 167 LNLKRKVDAGANRAITQ-FFF---DVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKLADMTNVRIPAWMAQMFD 240 (304)
T ss_dssp HHHHHHHHHTCCEEEEC-CCS---CHHHHHHHHHHHHHTTCCSCEECEECCCSCHHHHHHHHHHHTCCCCHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEeC-ccC---CHHHHHHHHHHHHhcCCCCcEEEEecccCCHHHHHHHHHcCCCcCCHHHHHHHH
Confidence 66666678999986644 666 678888888888765 5765444442 225555555555554
No 222
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=85.05 E-value=26 Score=33.41 Aligned_cols=125 Identities=6% Similarity=-0.021 Sum_probs=90.6
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCC-HHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHHHHHHHHHHcC
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMS-WDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVG 150 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt-~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai~lar~a~~~G 150 (356)
.+.+.+.+.+....+.|.+++=+-+. .+ .++=.++++.+.+.++.++++.+=+ ++.+.++++++++..++.|
T Consensus 148 ~~~~~~~~~a~~~~~~Gf~~vKik~g------~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~ 221 (391)
T 2qgy_A 148 KDTNDYLRQIEKFYGKKYGGIKIYPM------LDSLSISIQFVEKVREIVGDELPLMLDLAVPEDLDQTKSFLKEVSSFN 221 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSCEEECCC------CSSHHHHHHHHHHHHHHHCSSSCEEEECCCCSCHHHHHHHHHHHGGGC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccC------CChHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCHHHHHHHHHHHHhcC
Confidence 47888999999999999999866432 12 4666788888888888888998865 4568999999999999999
Q ss_pred CCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEEEeecC
Q 018443 151 MHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV 216 (356)
Q Consensus 151 adavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~--~pnivGiK~s~ 216 (356)
++.+ --|.- +. -.+.+++|.+. .||+.=. .-.+++.++++.+ .-+++-+|-+-
T Consensus 222 i~~i--EqP~~--~~---d~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~ 278 (391)
T 2qgy_A 222 PYWI--EEPVD--GE---NISLLTEIKNTFNMKVVTGE------KQSGLVHFRELISRNAADIFNPDISG 278 (391)
T ss_dssp CSEE--ECSSC--TT---CHHHHHHHHHHCSSCEEECT------TCCSHHHHHHHHHTTCCSEECCBTTT
T ss_pred CCeE--eCCCC--hh---hHHHHHHHHhhCCCCEEEcC------CcCCHHHHHHHHHcCCCCEEEECcch
Confidence 9865 34431 11 14556677665 5766432 3356888888873 56888899764
No 223
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=85.02 E-value=3.3 Score=39.90 Aligned_cols=100 Identities=13% Similarity=0.070 Sum_probs=79.2
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCC--CcEEEEecCCCCHHHHHHHHHHHH
Q 018443 70 DGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA--SVKVIGNTGSNSTREAIHATEQGF 147 (356)
Q Consensus 70 dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~g--rvpVi~gvg~~st~~ai~lar~a~ 147 (356)
.++.|.+-+.+.++.+.+.|++-|.++-|.|= +++.+-.++++.+.+.+++ ++++=++. +++.--++.-+-.|.
T Consensus 151 ~~r~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~---~~P~~~~~lv~~l~~~~~~~~~~~l~~H~-Hnd~GlAvAN~laAv 226 (370)
T 3rmj_A 151 ALRSEIDFLAEICGAVIEAGATTINIPDTVGY---SIPYKTEEFFRELIAKTPNGGKVVWSAHC-HNDLGLAVANSLAAL 226 (370)
T ss_dssp GGGSCHHHHHHHHHHHHHHTCCEEEEECSSSC---CCHHHHHHHHHHHHHHSTTGGGSEEEEEC-BCTTSCHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHcCCCEEEecCccCC---cCHHHHHHHHHHHHHhCCCcCceEEEEEe-CCCCChHHHHHHHHH
Confidence 47899999999999999999999999999985 7899999999999998865 36665554 567888899999999
Q ss_pred HcCCCEEEEcCCCCC----CCCHHHHHHHH
Q 018443 148 AVGMHAALHINPYYG----KTSLEGLISHF 173 (356)
Q Consensus 148 ~~Gadavlv~pP~y~----~~s~~~l~~y~ 173 (356)
++||+.+=..---++ ..+-++++..+
T Consensus 227 ~aGa~~vd~tv~GlGeraGN~~lE~vv~~L 256 (370)
T 3rmj_A 227 KGGARQVECTVNGLGERAGNASVEEIVMAL 256 (370)
T ss_dssp HTTCCEEEEBGGGCSSTTCBCBHHHHHHHH
T ss_pred HhCCCEEEEeccccCcccccccHHHHHHHH
Confidence 999999977654332 23445554443
No 224
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=85.00 E-value=4.6 Score=36.37 Aligned_cols=70 Identities=11% Similarity=0.214 Sum_probs=48.8
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCC-CCHHHHHHHHH
Q 018443 66 PYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGS-NSTREAIHATE 144 (356)
Q Consensus 66 Pf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~-~st~~ai~lar 144 (356)
--++|-+...+. ++.+.++|+|.|.++||.| .|.+.=.++++.+.+ .++|++.=.+. +..
T Consensus 14 ~gDP~~~~t~~~----~~~l~~~GaD~IelG~S~g----~t~~~~~~~v~~ir~---~~~Pivl~~y~~n~i-------- 74 (234)
T 2f6u_A 14 KLDPDRTNTDEI----IKAVADSGTDAVMISGTQN----VTYEKARTLIEKVSQ---YGLPIVVEPSDPSNV-------- 74 (234)
T ss_dssp EECTTSCCCHHH----HHHHHTTTCSEEEECCCTT----CCHHHHHHHHHHHTT---SCCCEEECCSSCCCC--------
T ss_pred eeCCCccccHHH----HHHHHHcCCCEEEECCCCC----CCHHHHHHHHHHhcC---CCCCEEEecCCcchh--------
Confidence 344444444444 5677889999999999755 477767777766654 47898886666 333
Q ss_pred HHHHcCCCEEEEc
Q 018443 145 QGFAVGMHAALHI 157 (356)
Q Consensus 145 ~a~~~Gadavlv~ 157 (356)
+.|+|++++.
T Consensus 75 ---~~gvDg~iip 84 (234)
T 2f6u_A 75 ---VYDVDYLFVP 84 (234)
T ss_dssp ---CCCSSEEEEE
T ss_pred ---hcCCCEEEEc
Confidence 7799999874
No 225
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=84.84 E-value=2.1 Score=40.03 Aligned_cols=118 Identities=17% Similarity=0.167 Sum_probs=67.3
Q ss_pred cCceeEeeecc--cCCCCC-CCHHHHHHHHHHHHHCCCCEEEEcc-Ccccc-cCCC-HHHHHHHHHHHHHHhC-CCcEEE
Q 018443 56 ALRLITAIKTP--YLPDGR-FDLEAYDDLVNMQIVNGAEGMIVGG-TTGEG-QLMS-WDEHIMLIGHTVNCFG-ASVKVI 128 (356)
Q Consensus 56 ~~Gvi~al~TP--f~~dg~-ID~~~l~~~v~~li~~Gv~Gl~v~G-stGE~-~~Lt-~eEr~~li~~~~~~~~-grvpVi 128 (356)
..|++- +|| |.+.|+ .|.+...++++.+++.|++-|=++| ||.-+ ...+ .||..+++..+.+... -++||.
T Consensus 42 iMgilN--vTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~vpiS 119 (297)
T 1tx2_A 42 IMGILN--VTPDSFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLPIS 119 (297)
T ss_dssp EEEECC--CCCCTTCSSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCSCEE
T ss_pred EEEEEe--CCCCccccCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCceEE
Confidence 456544 477 876665 4789999999999999999999988 43222 2233 6666667743322211 156776
Q ss_pred EecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018443 129 GNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNV 187 (356)
Q Consensus 129 ~gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~ 187 (356)
+-+.. . +-++.|.++|++-+--+.-. . .++++ +..+++. .|+++-+.
T Consensus 120 IDT~~---~---~V~~aAl~aGa~iINdvsg~--~-~d~~m---~~~aa~~g~~vVlmh~ 167 (297)
T 1tx2_A 120 IDTYK---A---EVAKQAIEAGAHIINDIWGA--K-AEPKI---AEVAAHYDVPIILMHN 167 (297)
T ss_dssp EECSC---H---HHHHHHHHHTCCEEEETTTT--S-SCTHH---HHHHHHHTCCEEEECC
T ss_pred EeCCC---H---HHHHHHHHcCCCEEEECCCC--C-CCHHH---HHHHHHhCCcEEEEeC
Confidence 65543 2 22334444488766554321 1 12222 3344444 68777665
No 226
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=84.76 E-value=3.9 Score=38.39 Aligned_cols=102 Identities=20% Similarity=0.104 Sum_probs=60.3
Q ss_pred HHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEc
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~ 157 (356)
+.+.++.+++.|++.+.+.+. + . . ++++.+.+ ..++|+..+.+ .+.++.+.+.|+|++.+.
T Consensus 91 ~~~~~~~~~~~g~d~V~l~~g--~----p-~---~~~~~l~~---~g~~v~~~v~s------~~~a~~a~~~GaD~i~v~ 151 (326)
T 3bo9_A 91 ADDLVKVCIEEKVPVVTFGAG--N----P-T---KYIRELKE---NGTKVIPVVAS------DSLARMVERAGADAVIAE 151 (326)
T ss_dssp HHHHHHHHHHTTCSEEEEESS--C----C-H---HHHHHHHH---TTCEEEEEESS------HHHHHHHHHTTCSCEEEE
T ss_pred HHHHHHHHHHCCCCEEEECCC--C----c-H---HHHHHHHH---cCCcEEEEcCC------HHHHHHHHHcCCCEEEEE
Confidence 467778888899999887543 1 2 2 23443333 25788887743 455677888999999998
Q ss_pred CCCCCCC-CHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCC-CHHHHHHHhc
Q 018443 158 NPYYGKT-SLEGLISHFDSVLSM--GPTIIYNVPSRTGQDI-PPRVIHTMAQ 205 (356)
Q Consensus 158 pP~y~~~-s~~~l~~y~~~va~~--~PiilYn~P~~tG~~l-s~~~l~~La~ 205 (356)
.+-+... .+..-.+.+.++.+. .||+.= | .+ +++.+.+..+
T Consensus 152 g~~~GG~~G~~~~~~ll~~i~~~~~iPviaa------G-GI~~~~dv~~al~ 196 (326)
T 3bo9_A 152 GMESGGHIGEVTTFVLVNKVSRSVNIPVIAA------G-GIADGRGMAAAFA 196 (326)
T ss_dssp CTTSSEECCSSCHHHHHHHHHHHCSSCEEEE------S-SCCSHHHHHHHHH
T ss_pred CCCCCccCCCccHHHHHHHHHHHcCCCEEEE------C-CCCCHHHHHHHHH
Confidence 7654322 111123455566554 465542 2 23 3666655543
No 227
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=84.76 E-value=24 Score=32.37 Aligned_cols=157 Identities=14% Similarity=0.044 Sum_probs=89.3
Q ss_pred HHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN 158 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~p 158 (356)
.++...+.+.|+++|-|+--.+-|. =+.+ -++.+.+.+ ++||+..=.-.+.. .+..|..+|||+|++..
T Consensus 82 ~~~A~~y~~~GA~~IsVltd~~~f~-Gs~~----~L~~ir~~v--~lPVl~Kdfi~d~~----qi~ea~~~GAD~VlLi~ 150 (272)
T 3tsm_A 82 PALAKAYEEGGAACLSVLTDTPSFQ-GAPE----FLTAARQAC--SLPALRKDFLFDPY----QVYEARSWGADCILIIM 150 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCSTTTC-CCHH----HHHHHHHTS--SSCEEEESCCCSTH----HHHHHHHTTCSEEEEET
T ss_pred HHHHHHHHHCCCCEEEEeccccccC-CCHH----HHHHHHHhc--CCCEEECCccCCHH----HHHHHHHcCCCEEEEcc
Confidence 4456667789999998754222221 1333 223344444 68998765444444 35567789999999987
Q ss_pred CCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHhc-CCCEEEEeecCc-----hh----hHhhhhCC
Q 018443 159 PYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMAQ-SPNLAGVKECVG-----ND----RVEHYTGN 227 (356)
Q Consensus 159 P~y~~~s~~~l~~y~~~va~~-~PiilYn~P~~tG~~ls~~~l~~La~-~pnivGiK~s~~-----d~----~i~~~~~~ 227 (356)
-.. +++++.++++...+- +-+++ .. =+.+.+.+..+ -+.++|+=.... |. ++....++
T Consensus 151 a~L---~~~~l~~l~~~a~~lGl~~lv-ev-------h~~eEl~~A~~~ga~iIGinnr~l~t~~~dl~~~~~L~~~ip~ 219 (272)
T 3tsm_A 151 ASV---DDDLAKELEDTAFALGMDALI-EV-------HDEAEMERALKLSSRLLGVNNRNLRSFEVNLAVSERLAKMAPS 219 (272)
T ss_dssp TTS---CHHHHHHHHHHHHHTTCEEEE-EE-------CSHHHHHHHTTSCCSEEEEECBCTTTCCBCTHHHHHHHHHSCT
T ss_pred ccc---CHHHHHHHHHHHHHcCCeEEE-Ee-------CCHHHHHHHHhcCCCEEEECCCCCccCCCChHHHHHHHHhCCC
Confidence 644 566766666665543 22222 11 13455665554 478999864332 11 23333444
Q ss_pred CeEEEecCc----chhHhHHHHcCCceeecccccc
Q 018443 228 GIVVWSGND----DQCHDARWNHGATGVISVTSNL 258 (356)
Q Consensus 228 ~~~v~~G~d----~~~l~~~l~~Ga~G~is~~~n~ 258 (356)
+..+++... +.. ......|++|++-|.+-+
T Consensus 220 ~~~vIaesGI~t~edv-~~l~~~Ga~gvLVG~alm 253 (272)
T 3tsm_A 220 DRLLVGESGIFTHEDC-LRLEKSGIGTFLIGESLM 253 (272)
T ss_dssp TSEEEEESSCCSHHHH-HHHHTTTCCEEEECHHHH
T ss_pred CCcEEEECCCCCHHHH-HHHHHcCCCEEEEcHHHc
Confidence 555544321 112 223578999999887644
No 228
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=84.74 E-value=18 Score=32.00 Aligned_cols=127 Identities=11% Similarity=0.054 Sum_probs=73.6
Q ss_pred HHHHHHHHHHCCCCEEEEccCccccc---CCCHHHHHHHHHHHHHHhCCCcE-EEEe------cCCCC-------HHHHH
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQ---LMSWDEHIMLIGHTVNCFGASVK-VIGN------TGSNS-------TREAI 140 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~---~Lt~eEr~~li~~~~~~~~grvp-Vi~g------vg~~s-------t~~ai 140 (356)
+...++...+.|.+++=+.....+.+ .++.++..++-+.+.+ .+=++. +.++ .++.+ .+...
T Consensus 14 ~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~~~~~~~h~~~~~~~~~~~~~~r~~~~~~~~ 92 (287)
T 2x7v_A 14 FDRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKK-HGIDWENAFCHSGYLINLASPKDDIWQKSVELLK 92 (287)
T ss_dssp GGGHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHH-HTCCGGGEEEECCTTCCTTCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHH-cCCCcceeEEecccccccCCCCHHHHHHHHHHHH
Confidence 56678888899999997754333322 4566676666655443 332321 3332 22222 23445
Q ss_pred HHHHHHHHcCCCEEEEcCCCCCCCCH----HHHHHHHHHHHhc---CCeEEEeCCCCCC-CCCCHHHHHHHhc
Q 018443 141 HATEQGFAVGMHAALHINPYYGKTSL----EGLISHFDSVLSM---GPTIIYNVPSRTG-QDIPPRVIHTMAQ 205 (356)
Q Consensus 141 ~lar~a~~~Gadavlv~pP~y~~~s~----~~l~~y~~~va~~---~PiilYn~P~~tG-~~ls~~~l~~La~ 205 (356)
+.++.|+++|+..+.+.+......+. +.+.+.++++++. +.+.+-|.+.... ..-+++.+.+|.+
T Consensus 93 ~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~l~~l~~~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~ 165 (287)
T 2x7v_A 93 KEVEICRKLGIRYLNIHPGSHLGTGEEEGIDRIVRGLNEVLNNTEGVVILLENVSQKGGNIGYKLEQLKKIRD 165 (287)
T ss_dssp HHHHHHHHHTCCEEEECCEECTTSCHHHHHHHHHHHHHHHHTTCCSCEEEEECCCCCTTEECSSHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHcccCCCEEEEeCCCCCCCccCCCHHHHHHHHH
Confidence 66788889999998876554433233 3455666777654 3566777653211 2236787888773
No 229
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=84.53 E-value=29 Score=33.53 Aligned_cols=119 Identities=15% Similarity=0.138 Sum_probs=73.4
Q ss_pred CCCCHHHHHHHHHHHHH-CCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCC-C------------------------
Q 018443 71 GRFDLEAYDDLVNMQIV-NGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA-S------------------------ 124 (356)
Q Consensus 71 g~ID~~~l~~~v~~li~-~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~g-r------------------------ 124 (356)
..++.+.+.+.++++.+ .|+..|++.| ||-..+.++.-.++++.+.+.-.- +
T Consensus 143 ~~ls~eei~~~i~~i~~~~gi~~V~ltG--GEPll~~d~~L~~il~~l~~~~~v~~i~i~Tng~~~~p~~it~e~l~~L~ 220 (416)
T 2a5h_A 143 DSMPMERIDKAIDYIRNTPQVRDVLLSG--GDALLVSDETLEYIIAKLREIPHVEIVRIGSRTPVVLPQRITPELVNMLK 220 (416)
T ss_dssp SBCCHHHHHHHHHHHHTCTTCCEEEEEE--SCTTSSCHHHHHHHHHHHHTSTTCCEEEEECSHHHHCGGGCCHHHHHHHG
T ss_pred CCCCHHHHHHHHHHHHhcCCCcEEEEEC--CCCCCCCHHHHHHHHHHHHhcCCccEEEEEecccccccccCCHHHHHHHH
Confidence 45889999999999888 6999998887 998888877777777766542110 0
Q ss_pred --cEEEEecCCCCH----HHHHHHHHHHHHcCCCEEE--EcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCC
Q 018443 125 --VKVIGNTGSNST----REAIHATEQGFAVGMHAAL--HINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTG 192 (356)
Q Consensus 125 --vpVi~gvg~~st----~~ai~lar~a~~~Gadavl--v~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG 192 (356)
..+.+++.++.. +++++..+.+.++|..-.+ ++.+-. ..+.+++.+..+.+.+. .|.+++..|...|
T Consensus 221 ~~~~v~Isl~~~~~~ei~~~v~~ai~~L~~aGi~v~i~~vll~Gv-Nd~~e~l~~l~~~l~~lgv~~~~i~~~~~~~g 297 (416)
T 2a5h_A 221 KYHPVWLNTHFNHPNEITEESTRACQLLADAGVPLGNQSVLLRGV-NDCVHVMKELVNKLVKIRVRPYYIYQCDLSLG 297 (416)
T ss_dssp GGCSEEEEECCCSGGGCCHHHHHHHHHHHHTTCCEEEEEECCTTT-TCSHHHHHHHHHHHHHTTEEEEEEECCCCBTT
T ss_pred hcCcEEEEEecCCHHHHhHHHHHHHHHHHHcCCEEEEEEEEECCC-CCCHHHHHHHHHHHHHcCCceEEEeecCCCCC
Confidence 123344433222 5677777777788874222 121211 23555666666666654 3556666654333
No 230
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=84.48 E-value=3.2 Score=39.95 Aligned_cols=131 Identities=11% Similarity=0.038 Sum_probs=71.1
Q ss_pred EeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCC-CHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHH
Q 018443 61 TAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLM-SWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREA 139 (356)
Q Consensus 61 ~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~L-t~eEr~~li~~~~~~~~grvpVi~gvg~~st~~a 139 (356)
|.++.|++-......+.-.++.+...+.|+... +||...+ ...|. .-. .+++.. ..+++++.++...+.+
T Consensus 88 Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~-----vGs~~~~le~~~~-~~~-~v~r~~-P~~~~ianig~~~~~e- 158 (365)
T 3sr7_A 88 PFYINAMTGGSQKGKEVNEKLAQVADTCGLLFV-----TGSYSTALKNPDD-TSY-QVKKSR-PHLLLATNIGLDKPYQ- 158 (365)
T ss_dssp SEEEECC----CCCHHHHHHHHHHHHHHTCCEE-----C--------------------------CCEEEEEETTSCHH-
T ss_pred ceEeccccCCCcchhHHHHHHHHHHHHcCCCee-----cccccccccCccc-cce-EehhhC-CCCcEEEEeCCCCCHH-
Confidence 666777775444566777777887778886544 2444432 22221 111 123333 5678999887654433
Q ss_pred HHHHHHHHHcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc
Q 018443 140 IHATEQGFAVGMHAALHINPYY-------GKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ 205 (356)
Q Consensus 140 i~lar~a~~~Gadavlv~pP~y-------~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~ 205 (356)
+..+.++.+|||++.+.-.+. ...+.+.+.+..+.|.+. .||++=.. |..++++...++.+
T Consensus 159 -~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~v----g~g~s~e~A~~l~~ 228 (365)
T 3sr7_A 159 -AGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKLQLPFILKEV----GFGMDVKTIQTAID 228 (365)
T ss_dssp -HHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEEEC----SSCCCHHHHHHHHH
T ss_pred -HHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEEEC----CCCCCHHHHHHHHH
Confidence 445556678999987654321 123344566777777765 69999863 55688998888875
No 231
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=84.41 E-value=18 Score=33.56 Aligned_cols=99 Identities=17% Similarity=0.139 Sum_probs=68.6
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCC
Q 018443 72 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGM 151 (356)
Q Consensus 72 ~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Ga 151 (356)
.++.+.+.+.++.+.+.|+..+++. .||.+.+..+.-.++++.+.+. .+.+-...+..+ + +..+..+++|+
T Consensus 83 ~ls~eei~~~i~~~~~~g~~~i~~~--gGe~p~~~~~~~~~li~~i~~~---~~~i~~s~g~l~-~---e~l~~L~~ag~ 153 (348)
T 3iix_A 83 RMTPEEIVERARLAVQFGAKTIVLQ--SGEDPYXMPDVISDIVKEIKKM---GVAVTLSLGEWP-R---EYYEKWKEAGA 153 (348)
T ss_dssp BCCHHHHHHHHHHHHHTTCSEEEEE--ESCCGGGTTHHHHHHHHHHHTT---SCEEEEECCCCC-H---HHHHHHHHHTC
T ss_pred eCCHHHHHHHHHHHHHCCCCEEEEE--eCCCCCccHHHHHHHHHHHHhc---CceEEEecCCCC-H---HHHHHHHHhCC
Confidence 4789999999999999999999874 4887788878888888877655 456665555543 3 34455566889
Q ss_pred CEEEEcCCCCC---------CCCHHHHHHHHHHHHhc
Q 018443 152 HAALHINPYYG---------KTSLEGLISHFDSVLSM 179 (356)
Q Consensus 152 davlv~pP~y~---------~~s~~~l~~y~~~va~~ 179 (356)
|.+.+..-.+. ..+-+.+.+-.+.+.+.
T Consensus 154 ~~v~i~let~~~~~~~~i~~~~~~~~~~~~i~~~~~~ 190 (348)
T 3iix_A 154 DRYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKEL 190 (348)
T ss_dssp CEEECCCBCSCHHHHHHHSTTSCHHHHHHHHHHHHHT
T ss_pred CEEeeeeeeCCHHHHHHhCCCcCHHHHHHHHHHHHHh
Confidence 98875433221 13556666666666555
No 232
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=84.35 E-value=18 Score=33.72 Aligned_cols=117 Identities=11% Similarity=0.047 Sum_probs=81.1
Q ss_pred CceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEcc-----Cccc--ccCCCHHHHHHHHHHHHHHhCCCcEEEE
Q 018443 57 LRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGG-----TTGE--GQLMSWDEHIMLIGHTVNCFGASVKVIG 129 (356)
Q Consensus 57 ~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~G-----stGE--~~~Lt~eEr~~li~~~~~~~~grvpVi~ 129 (356)
.|=...++|.+|. ...++++ +.|++++++.| +.|- .-.+|.+|....++.+++.+ ++||++
T Consensus 27 ~~~~i~~~~ayD~-------~sA~l~e---~aG~dai~vs~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~--~~pvia 94 (305)
T 3ih1_A 27 ANEILQIPGAHDA-------MAALVAR---NTGFLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVRAT--DLPVLV 94 (305)
T ss_dssp SSSCEEEEBCSSH-------HHHHHHH---HTTCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHHH--CCCEEE
T ss_pred CCCcEEEecCcCH-------HHHHHHH---HcCCCEEEECcHHHHHhCCCCCCCcCCHHHHHHHHHHHHHhc--CCCEEE
Confidence 3433446787763 2333333 57999999988 3343 23579999999999888877 479998
Q ss_pred ec--CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCC----------CCCHHHHHHHHHHHHhc-CCeEEE
Q 018443 130 NT--GSNSTREAIHATEQGFAVGMHAALHINPYYG----------KTSLEGLISHFDSVLSM-GPTIIY 185 (356)
Q Consensus 130 gv--g~~st~~ai~lar~a~~~Gadavlv~pP~y~----------~~s~~~l~~y~~~va~~-~PiilY 185 (356)
=. |..+..++.+.++..+++|+++|-+---.+. -.+.++..+-.+++.++ .+++|.
T Consensus 95 D~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~~~~I~ 163 (305)
T 3ih1_A 95 DIDTGFGGVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAPSLYIV 163 (305)
T ss_dssp ECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCTTSEEE
T ss_pred ECCCCCCCHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCCCeEEE
Confidence 43 4346788999999999999999987543211 13667888888888777 455544
No 233
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=84.25 E-value=2.9 Score=38.20 Aligned_cols=99 Identities=9% Similarity=0.025 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC---------CCCCCCCHHHHHHHHHHHHh
Q 018443 108 DEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN---------PYYGKTSLEGLISHFDSVLS 178 (356)
Q Consensus 108 eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~p---------P~y~~~s~~~l~~y~~~va~ 178 (356)
.++..-++...+ +++.-++.++-... .|+.++++|+|++++.- |.....|-++++.|-+.|++
T Consensus 6 ~~~~~~lr~l~~--~~~~i~~~~ayD~~------sA~~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r 77 (255)
T 2qiw_A 6 KSLATKFASDHE--SGKLLVLPTVWDTW------SAGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITS 77 (255)
T ss_dssp HHHHHHHHHHHH--TCCCEECCEESSHH------HHHHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHh--CCCcEEEecCcCHH------HHHHHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHh
Confidence 344443433332 34433455665543 34566778999999873 33345688999999999998
Q ss_pred c--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCEEEEeecCc
Q 018443 179 M--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKECVG 217 (356)
Q Consensus 179 ~--~PiilYn~P~~tG~~ls~~~l~~La~~pnivGiK~s~~ 217 (356)
. .| ++-|.|.-.|... .+++.++.+ -++.|||.+.+
T Consensus 78 ~~~~p-viaD~~~Gyg~~~-~~~~~~l~~-aGa~gv~iEd~ 115 (255)
T 2qiw_A 78 AVSIP-VSVDVESGYGLSP-ADLIAQILE-AGAVGINVEDV 115 (255)
T ss_dssp HCSSC-EEEECTTCTTCCH-HHHHHHHHH-TTCCEEEECSE
T ss_pred cCCCC-EEeccCCCcCcHH-HHHHHHHHH-cCCcEEEECCC
Confidence 7 45 7789885444444 778888887 88999998876
No 234
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=84.23 E-value=14 Score=33.06 Aligned_cols=102 Identities=14% Similarity=0.080 Sum_probs=70.9
Q ss_pred ceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCC-CcEEEEecCCC--
Q 018443 58 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA-SVKVIGNTGSN-- 134 (356)
Q Consensus 58 Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~g-rvpVi~gvg~~-- 134 (356)
++-.+.+.=| +-|.-..+.-..-++..++.|++-|=+-=.-|..-+=.+++-.+-+..+++.+++ -++||.=++..
T Consensus 63 ~v~v~tVigF-P~G~~~~~~K~~E~~~Ai~~GAdEIDmVinig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~ 141 (231)
T 3ndo_A 63 GLAIAAVAGF-PSGKHVPGIKATEAELAVAAGATEIDMVIDVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLE 141 (231)
T ss_dssp TCEEEEEEST-TTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHH
T ss_pred CCeEEEEecC-CCCCCcHHHHHHHHHHHHHcCCCEEEEEeehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCC
Confidence 3333333344 2566667777888889999999988666666655555667777777777777654 35677777666
Q ss_pred --CHHHHHHHHHHHHHcCCCEEEEcCCC
Q 018443 135 --STREAIHATEQGFAVGMHAALHINPY 160 (356)
Q Consensus 135 --st~~ai~lar~a~~~Gadavlv~pP~ 160 (356)
+.++-++.++.+.++|||.|=...=|
T Consensus 142 ~~t~eei~~a~~ia~~aGADfVKTSTGf 169 (231)
T 3ndo_A 142 FSGEPLLADVCRVARDAGADFVKTSTGF 169 (231)
T ss_dssp HTCHHHHHHHHHHHHHTTCSEEECCCSC
T ss_pred CCCHHHHHHHHHHHHHHCcCEEEcCCCC
Confidence 67777888888899999988765433
No 235
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=84.10 E-value=3.5 Score=44.91 Aligned_cols=83 Identities=7% Similarity=0.065 Sum_probs=60.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCc---------ccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHH
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTT---------GEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHAT 143 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~Gst---------GE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~la 143 (356)
-|.+.+.+.++.+.+.|+++|-++.+. |-...-+.+.-.++++.+.+.+ ++||++=+.. +..+..+.+
T Consensus 645 ~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~--~~Pv~vK~~~-~~~~~~~~a 721 (1025)
T 1gte_A 645 YNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAV--QIPFFAKLTP-NVTDIVSIA 721 (1025)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHC--SSCEEEEECS-CSSCHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhh--CCceEEEeCC-ChHHHHHHH
Confidence 367889999999999999999997653 1111124555566777766655 5799886543 344788999
Q ss_pred HHHHHcCCCEEEEcC
Q 018443 144 EQGFAVGMHAALHIN 158 (356)
Q Consensus 144 r~a~~~Gadavlv~p 158 (356)
+.++++|+|++.+++
T Consensus 722 ~~~~~~G~d~i~v~N 736 (1025)
T 1gte_A 722 RAAKEGGADGVTATN 736 (1025)
T ss_dssp HHHHHHTCSEEEECC
T ss_pred HHHHHcCCCEEEEec
Confidence 999999999999953
No 236
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=84.07 E-value=3.6 Score=36.39 Aligned_cols=71 Identities=15% Similarity=-0.009 Sum_probs=48.6
Q ss_pred HHHHHHHHHHCCCCEEEEccCccccc-CCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEE
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQ-LMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALH 156 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~-~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv 156 (356)
..+.++.+.+.|++.+.+..-.|-+. ..+. .+++.+.+.+ ++|++++-+-.+.++ ++.+.++|||+|++
T Consensus 33 ~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~----~~i~~i~~~~--~ipv~v~ggi~~~~~----~~~~l~~Gad~V~l 102 (244)
T 2y88_A 33 AVDAALGWQRDGAEWIHLVDLDAAFGRGSNH----ELLAEVVGKL--DVQVELSGGIRDDES----LAAALATGCARVNV 102 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH----HHHHHHHHHC--SSEEEEESSCCSHHH----HHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEEcCcccccCCChH----HHHHHHHHhc--CCcEEEECCCCCHHH----HHHHHHcCCCEEEE
Confidence 44566678899999999876544332 2333 5555666654 689999876655543 66666789999998
Q ss_pred cC
Q 018443 157 IN 158 (356)
Q Consensus 157 ~p 158 (356)
..
T Consensus 103 g~ 104 (244)
T 2y88_A 103 GT 104 (244)
T ss_dssp CH
T ss_pred Cc
Confidence 64
No 237
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=84.00 E-value=25 Score=33.59 Aligned_cols=145 Identities=8% Similarity=-0.021 Sum_probs=98.3
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHHHHHHHHHHcCC
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 151 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai~lar~a~~~Ga 151 (356)
.+.+.+.+.+....+.|.+++=+-...+ +.++=.++++.+.+.++.++++.+=+ ++.+.++++++++..++.|+
T Consensus 161 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~-----~~~~~~e~v~avR~avg~d~~l~vDan~~~~~~~a~~~~~~l~~~~i 235 (393)
T 2og9_A 161 TPIDQLMVNASASIERGIGGIKLKVGQP-----DGALDIARVTAVRKHLGDAVPLMVDANQQWDRPTAQRMCRIFEPFNL 235 (393)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEECCCS-----CHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCC-----CHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhhCC
Confidence 4788999999999999999986533221 35666778888888888888988865 45689999999999999998
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEEEeecC--chh---hHh
Q 018443 152 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV--GND---RVE 222 (356)
Q Consensus 152 davlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~--~pnivGiK~s~--~d~---~i~ 222 (356)
+.+ -.|.- ..+ .+.++.+.+. .||+.=. .-.+++.++++.+ .-+++.+|-+- |-. ++.
T Consensus 236 ~~i--E~P~~-~~~----~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~ 302 (393)
T 2og9_A 236 VWI--EEPLD-AYD----HEGHAALALQFDTPIATGE------MLTSAAEHGDLIRHRAADYLMPDAPRVGGITPFLKIA 302 (393)
T ss_dssp SCE--ECCSC-TTC----HHHHHHHHHHCSSCEEECT------TCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHHHH
T ss_pred CEE--ECCCC-ccc----HHHHHHHHHhCCCCEEeCC------CcCCHHHHHHHHHCCCCCEEeeCccccCCHHHHHHHH
Confidence 854 34431 112 4555667665 5776543 2346888888863 56888899653 222 333
Q ss_pred hhh-CCCeEEEecC
Q 018443 223 HYT-GNGIVVWSGN 235 (356)
Q Consensus 223 ~~~-~~~~~v~~G~ 235 (356)
++. ..++.++.+.
T Consensus 303 ~~A~~~gi~~~~h~ 316 (393)
T 2og9_A 303 SLAEHAGLMLAPHF 316 (393)
T ss_dssp HHHHHTTCEECCCS
T ss_pred HHHHHcCCEEeccC
Confidence 332 2456665543
No 238
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=83.98 E-value=3.5 Score=37.97 Aligned_cols=81 Identities=15% Similarity=0.159 Sum_probs=49.4
Q ss_pred HHHHHHHHHHCCCCEEEEccCccccc---------------CCCH----HHHHHHHHHHHHHhCCCcEEEEecCCCCHHH
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQ---------------LMSW----DEHIMLIGHTVNCFGASVKVIGNTGSNSTRE 138 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~---------------~Lt~----eEr~~li~~~~~~~~grvpVi~gvg~~st~~ 138 (356)
+..+++.+.+.|+++|.+.++..... .++- ..-.++++.+.+.+ ++|||++=|=.+.++
T Consensus 178 ~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~--~ipvia~GGI~~~~d 255 (311)
T 1ep3_A 178 IVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDV--DIPIIGMGGVANAQD 255 (311)
T ss_dssp SHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTC--SSCEEECSSCCSHHH
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhc--CCCEEEECCcCCHHH
Confidence 45667788899999999866321110 0111 11235555555544 789886544445666
Q ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCC
Q 018443 139 AIHATEQGFAVGMHAALHINPYYGKT 164 (356)
Q Consensus 139 ai~lar~a~~~Gadavlv~pP~y~~~ 164 (356)
+.+.. +.|||+|++..+++..+
T Consensus 256 ~~~~l----~~GAd~V~vg~~~l~~p 277 (311)
T 1ep3_A 256 VLEMY----MAGASAVAVGTANFADP 277 (311)
T ss_dssp HHHHH----HHTCSEEEECTHHHHCT
T ss_pred HHHHH----HcCCCEEEECHHHHcCc
Confidence 65544 46999999998876543
No 239
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=83.90 E-value=1.8 Score=39.71 Aligned_cols=85 Identities=13% Similarity=0.186 Sum_probs=58.5
Q ss_pred cCceeEeeecccCCCCCCCHHHHHHHH------------------------HHHHHCCCCEEEEccCcccccCCCHHHHH
Q 018443 56 ALRLITAIKTPYLPDGRFDLEAYDDLV------------------------NMQIVNGAEGMIVGGTTGEGQLMSWDEHI 111 (356)
Q Consensus 56 ~~Gvi~al~TPf~~dg~ID~~~l~~~v------------------------~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~ 111 (356)
..|++--. +++||+||.+.+++++ +++++.|++-|+..|... +..|-.
T Consensus 87 adGvV~G~---Lt~dg~iD~~~~~~Li~~a~~~~vTFHRAfD~~~d~~~ale~L~~lG~~rILTSG~~~-----~a~~g~ 158 (256)
T 1twd_A 87 FPGLVTGV---LDVDGNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSGQKS-----DALQGL 158 (256)
T ss_dssp CSEEEECC---BCTTSSBCHHHHHHHHHHHTTSEEEECGGGGGCSCHHHHHHHHHHHTCCEEEECTTSS-----STTTTH
T ss_pred CCEEEEee---ECCCCCcCHHHHHHHHHHhCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCC-----CHHHHH
Confidence 45555444 4569999999998885 457889999998666532 456667
Q ss_pred HHHHHHHHHhCCCcEEEEecC--CCCHHHHHHHHHHHHHcCCCEEEE
Q 018443 112 MLIGHTVNCFGASVKVIGNTG--SNSTREAIHATEQGFAVGMHAALH 156 (356)
Q Consensus 112 ~li~~~~~~~~grvpVi~gvg--~~st~~ai~lar~a~~~Gadavlv 156 (356)
.+++..++..+ ++.|++|-| ..+..+-+ ..|++.+-.
T Consensus 159 ~~L~~Lv~~a~-~i~Im~GgGv~~~Ni~~l~-------~tGv~e~H~ 197 (256)
T 1twd_A 159 SKIMELIAHRD-APIIMAGAGVRAENLHHFL-------DAGVLEVHS 197 (256)
T ss_dssp HHHHHHHTSSS-CCEEEEESSCCTTTHHHHH-------HHTCSEEEE
T ss_pred HHHHHHHHhhC-CcEEEecCCcCHHHHHHHH-------HcCCCeEeE
Confidence 77777777666 888998655 33444321 467777763
No 240
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=83.85 E-value=3 Score=37.28 Aligned_cols=106 Identities=8% Similarity=0.004 Sum_probs=61.4
Q ss_pred HHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 159 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP 159 (356)
+.++.+.+.|++.+++..+... ++++-.++++.+.+. .+++++.+.+ .+.++.+.++|+|.+.+..-
T Consensus 92 ~~i~~~~~aGad~I~l~~~~~~----~p~~l~~~i~~~~~~---g~~v~~~v~t------~eea~~a~~~Gad~Ig~~~~ 158 (229)
T 3q58_A 92 QDVDALAQAGADIIAFDASFRS----RPVDIDSLLTRIRLH---GLLAMADCST------VNEGISCHQKGIEFIGTTLS 158 (229)
T ss_dssp HHHHHHHHHTCSEEEEECCSSC----CSSCHHHHHHHHHHT---TCEEEEECSS------HHHHHHHHHTTCSEEECTTT
T ss_pred HHHHHHHHcCCCEEEECccccC----ChHHHHHHHHHHHHC---CCEEEEecCC------HHHHHHHHhCCCCEEEecCc
Confidence 4466678899999977666543 233445555555442 5678887753 45678889999999975432
Q ss_pred CCCC---CCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCC-CHHHHHHHhcC
Q 018443 160 YYGK---TSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDI-PPRVIHTMAQS 206 (356)
Q Consensus 160 ~y~~---~s~~~l~~y~~~va~~-~PiilYn~P~~tG~~l-s~~~l~~La~~ 206 (356)
-|.. .... -.+.++++.+. .|++-- | .+ +++.+.++.+.
T Consensus 159 g~t~~~~~~~~-~~~li~~l~~~~ipvIA~------G-GI~t~~d~~~~~~~ 202 (229)
T 3q58_A 159 GYTGPITPVEP-DLAMVTQLSHAGCRVIAE------G-RYNTPALAANAIEH 202 (229)
T ss_dssp TSSSSCCCSSC-CHHHHHHHHTTTCCEEEE------S-SCCSHHHHHHHHHT
T ss_pred cCCCCCcCCCC-CHHHHHHHHHcCCCEEEE------C-CCCCHHHHHHHHHc
Confidence 2211 1000 12444555543 455422 2 24 57777777654
No 241
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=83.81 E-value=28 Score=32.50 Aligned_cols=170 Identities=11% Similarity=0.108 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCC-------CCHHH-HHH-HHHH
Q 018443 75 LEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGS-------NSTRE-AIH-ATEQ 145 (356)
Q Consensus 75 ~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~-------~st~~-ai~-lar~ 145 (356)
++-++++++.+.+.|++|++. +-|=. +...++ -+..++ .++...+. ...++ .+- -++.
T Consensus 70 ~~~l~~~~~~~~~~Gvdavl~--~~gi~------~d~~Li----~~L~~~-tv~gs~~~ggl~g~~~~~d~~~~~~sVe~ 136 (307)
T 3fok_A 70 YELLERMAIALSRPGVDGVLG--TPDII------DDLAAL----GLLDDK-IVVGSMNRGGLRGASFEMDDRYTGYNVSS 136 (307)
T ss_dssp HHHHHHHHHHHHSTTCCEEEE--CHHHH------HHHHHT----TCCTTC-EEEEECCCCSCTTCTTTTSCCCCSCCHHH
T ss_pred HHHHHHHHHHHhccCCCEEEE--Ccchh------hcccce----EEecCc-ccccccCccccccCCCCccccccccCHHH
Confidence 567899999999999999975 33322 222221 233444 33332321 00111 111 3455
Q ss_pred HHHcCCCEEEEcCCC-CCCCCHHHHHHHHHHHHhc-----CCeEEE--eCCC---CCCCCCCHHHHHHHh----cC-CC-
Q 018443 146 GFAVGMHAALHINPY-YGKTSLEGLISHFDSVLSM-----GPTIIY--NVPS---RTGQDIPPRVIHTMA----QS-PN- 208 (356)
Q Consensus 146 a~~~Gadavlv~pP~-y~~~s~~~l~~y~~~va~~-----~PiilY--n~P~---~tG~~ls~~~l~~La----~~-pn- 208 (356)
|.++|+|++-+..-. +..+.+.+.++.+.++.++ +|+++. =.|. ....+.+++.+...+ ++ ..
T Consensus 137 AvrlGADaV~~l~~i~~Gs~~e~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaELGADs 216 (307)
T 3fok_A 137 MVDRGVDFAKTLVRINLSDAGTAPTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAGLGNDS 216 (307)
T ss_dssp HHHHTCCEEEEEEEECTTCTTHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHTCSSCC
T ss_pred HHHCCCCEEEEEEEECCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHHhCCCc
Confidence 566799998754333 3456778888888888764 698764 2222 112357888876654 34 25
Q ss_pred ---EEEEeecCch-hhHhhhhCCCeEEEecCc----chhH---hHHHH-cCCceeecccccc
Q 018443 209 ---LAGVKECVGN-DRVEHYTGNGIVVWSGND----DQCH---DARWN-HGATGVISVTSNL 258 (356)
Q Consensus 209 ---ivGiK~s~~d-~~i~~~~~~~~~v~~G~d----~~~l---~~~l~-~Ga~G~is~~~n~ 258 (356)
|+=++++ .+ .++.+.+.-.+.+..|.- +.++ ...+. .|+.|++.|=.-+
T Consensus 217 ~~tivK~~y~-e~f~~Vv~a~~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNIf 277 (307)
T 3fok_A 217 SYTWMKLPVV-EEMERVMESTTMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTLL 277 (307)
T ss_dssp SSEEEEEECC-TTHHHHGGGCSSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTTS
T ss_pred CCCEEEeCCc-HHHHHHHHhCCCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhhc
Confidence 6656666 22 345444433344444432 1222 22356 6999998774433
No 242
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=83.67 E-value=2.5 Score=41.90 Aligned_cols=69 Identities=10% Similarity=0.124 Sum_probs=48.4
Q ss_pred HHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEc
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~ 157 (356)
..+.++++++.|++.+++.++.|. .+.-.+.++.+.+.. +.+|+++|-.. + .+.++.+.++|+|++.+.
T Consensus 234 ~~~~a~~l~~~G~d~ivi~~a~g~-----~~~~~~~i~~l~~~~-p~~pvi~G~v~-t----~~~a~~~~~~Gad~I~vg 302 (491)
T 1zfj_A 234 TFERAEALFEAGADAIVIDTAHGH-----SAGVLRKIAEIRAHF-PNRTLIAGNIA-T----AEGARALYDAGVDVVKVG 302 (491)
T ss_dssp HHHHHHHHHHHTCSEEEECCSCTT-----CHHHHHHHHHHHHHC-SSSCEEEEEEC-S----HHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHcCCCeEEEeeecCc-----chhHHHHHHHHHHHC-CCCcEeCCCcc-C----HHHHHHHHHcCCCEEEEC
Confidence 356688899999999987765442 234456666666666 36788876332 2 267778889999999875
No 243
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=83.63 E-value=3.9 Score=36.40 Aligned_cols=170 Identities=11% Similarity=0.018 Sum_probs=92.2
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccccc-CCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCC
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQ-LMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGM 151 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~-~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Ga 151 (356)
.|+..+.+.++.+.+.|++-+-+--.-|.|. .+|.-. ++++.+.+.+ +.|+.+..--++.+ ++.+.+.++||
T Consensus 14 ~D~~~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~--~~v~~lr~~~--~~~~~vhlmv~dp~---~~i~~~~~aGa 86 (230)
T 1tqj_A 14 ADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGP--LIVDAIRPLT--KKTLDVHLMIVEPE---KYVEDFAKAGA 86 (230)
T ss_dssp SCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCH--HHHHHHGGGC--CSEEEEEEESSSGG---GTHHHHHHHTC
T ss_pred cCHhHHHHHHHHHHHcCCCEEEEEEEecCCCcchhhhH--HHHHHHHhhc--CCcEEEEEEccCHH---HHHHHHHHcCC
Confidence 4588889999999999999875444456553 555433 5666666554 45666554434443 36688888999
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc-C-CeEEEeCCCCCCCCCCHHHHHHHhcCCCEE----------EEeecCch-
Q 018443 152 HAALHINPYYGKTSLEGLISHFDSVLSM-G-PTIIYNVPSRTGQDIPPRVIHTMAQSPNLA----------GVKECVGN- 218 (356)
Q Consensus 152 davlv~pP~y~~~s~~~l~~y~~~va~~-~-PiilYn~P~~tG~~ls~~~l~~La~~pniv----------GiK~s~~d- 218 (356)
|++.+..=.. .+ +...+..+.+.+. . ..+.- +|.. +.+.++.+.+....+ |-|.....
T Consensus 87 dgv~vh~e~~--~~-~~~~~~~~~i~~~g~~~gv~~-~p~t-----~~e~~~~~~~~~D~v~~msv~pg~ggq~~~~~~~ 157 (230)
T 1tqj_A 87 DIISVHVEHN--AS-PHLHRTLCQIRELGKKAGAVL-NPST-----PLDFLEYVLPVCDLILIMSVNPGFGGQSFIPEVL 157 (230)
T ss_dssp SEEEEECSTT--TC-TTHHHHHHHHHHTTCEEEEEE-CTTC-----CGGGGTTTGGGCSEEEEESSCC----CCCCGGGH
T ss_pred CEEEECcccc--cc-hhHHHHHHHHHHcCCcEEEEE-eCCC-----cHHHHHHHHhcCCEEEEEEeccccCCccCcHHHH
Confidence 9998763100 11 3455666666655 2 22222 4432 123344443322233 32211100
Q ss_pred hh---Hhhhh-----CCCeEEEecCcchhHhHHHHcCCceeecccccc
Q 018443 219 DR---VEHYT-----GNGIVVWSGNDDQCHDARWNHGATGVISVTSNL 258 (356)
Q Consensus 219 ~~---i~~~~-----~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~ 258 (356)
.+ +++.. +-.+.+-.|-...-.......|+||++.|++-+
T Consensus 158 ~~i~~lr~~~~~~~~~~~I~v~GGI~~~~~~~~~~aGad~vvvGSai~ 205 (230)
T 1tqj_A 158 PKIRALRQMCDERGLDPWIEVDGGLKPNNTWQVLEAGANAIVAGSAVF 205 (230)
T ss_dssp HHHHHHHHHHHHHTCCCEEEEESSCCTTTTHHHHHHTCCEEEESHHHH
T ss_pred HHHHHHHHHHHhcCCCCcEEEECCcCHHHHHHHHHcCCCEEEECHHHH
Confidence 12 33333 233455555433223344578999999886644
No 244
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=83.61 E-value=2.5 Score=41.24 Aligned_cols=65 Identities=12% Similarity=0.115 Sum_probs=44.9
Q ss_pred HHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEe-cCCCCHHHHHHHHHHHHHcCCCEEEE
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGN-TGSNSTREAIHATEQGFAVGMHAALH 156 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~g-vg~~st~~ai~lar~a~~~Gadavlv 156 (356)
.+.++.+++.|++-|++..+.|. .+.-.++++.+.+.. .+||++| +. + .+.++.+.++|||+|.+
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~-----~~~~~e~I~~ik~~~--~i~Vi~g~V~--t----~e~A~~a~~aGAD~I~v 211 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGH-----SLNIIRTLKEIKSKM--NIDVIVGNVV--T----EEATKELIENGADGIKV 211 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCS-----BHHHHHHHHHHHTTC--CCEEEEEEEC--S----HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEeCCCCC-----cccHHHHHHHHHhcC--CCeEEEeecC--C----HHHHHHHHHcCCCEEEE
Confidence 56788889999998876545442 233345555555544 6899974 43 2 45667888999999998
No 245
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=83.59 E-value=5.3 Score=38.22 Aligned_cols=90 Identities=12% Similarity=0.192 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHH----HHHHHHHHHhc---------CCeEEEeCCCCCCCCCCHHHHHH
Q 018443 136 TREAIHATEQGFAVGMHAALHINPYYGKTSLEG----LISHFDSVLSM---------GPTIIYNVPSRTGQDIPPRVIHT 202 (356)
Q Consensus 136 t~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~----l~~y~~~va~~---------~PiilYn~P~~tG~~ls~~~l~~ 202 (356)
++.++++++...++|||++.+..+.-.-.|++. ..-|+++|.+. .|++++.. |. ...+..
T Consensus 196 ~~~~~~y~~~qi~aGad~i~ifDs~~~~Lsp~~f~ef~~Py~k~i~~~l~~~~~g~~~pvi~f~~----g~---~~~l~~ 268 (368)
T 4exq_A 196 AQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQLKREHDGARVPAIAFTK----GG---GLWLED 268 (368)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEETTGGGSCTTHHHHHTHHHHHHHHHTSCCEETTEECCEEEEET----TC---GGGHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCcEEEEcC----Cc---HHHHHH
Confidence 444456666667889999887666433344433 56677777764 25554432 22 234566
Q ss_pred HhcC-CCEEEEeecCchh-hHhhhhCCCeEEEe
Q 018443 203 MAQS-PNLAGVKECVGND-RVEHYTGNGIVVWS 233 (356)
Q Consensus 203 La~~-pnivGiK~s~~d~-~i~~~~~~~~~v~~ 233 (356)
+++. .+++++ +...|. ..++..++++.+..
T Consensus 269 l~~~g~d~i~~-d~~~dl~~ak~~~g~~~~l~G 300 (368)
T 4exq_A 269 LAATGVDAVGL-DWTVNLGRARERVAGRVALQG 300 (368)
T ss_dssp HHTSSCSEEEC-CTTSCHHHHHHHHTTSSEEEE
T ss_pred HHHhCCCEEee-CCCCCHHHHHHHhCCCEEEEE
Confidence 6664 356666 333332 33333344444433
No 246
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=83.51 E-value=4.5 Score=38.30 Aligned_cols=102 Identities=16% Similarity=0.132 Sum_probs=81.8
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHc
Q 018443 70 DGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAV 149 (356)
Q Consensus 70 dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~ 149 (356)
.+..|.+-+.+.++.+.+.|++.|.++-|+|= +++++-.++++.+.+.++ ++|+=++. +++.--++.-+-.|.++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~---~~P~~v~~lv~~l~~~~p-~~~i~~H~-Hnd~GlA~AN~laAv~a 237 (337)
T 3ble_A 163 GFRNSPDYVKSLVEHLSKEHIERIFLPDTLGV---LSPEETFQGVDSLIQKYP-DIHFEFHG-HNDYDLSVANSLQAIRA 237 (337)
T ss_dssp HHHHCHHHHHHHHHHHHTSCCSEEEEECTTCC---CCHHHHHHHHHHHHHHCT-TSCEEEEC-BCTTSCHHHHHHHHHHT
T ss_pred CCcCCHHHHHHHHHHHHHcCCCEEEEecCCCC---cCHHHHHHHHHHHHHhcC-CCeEEEEe-cCCcchHHHHHHHHHHh
Confidence 46788999999999999999999999989886 689999999999998874 56765554 56777888899999999
Q ss_pred CCCEEEEcCCCCC----CCCHHHHHHHHHHH
Q 018443 150 GMHAALHINPYYG----KTSLEGLISHFDSV 176 (356)
Q Consensus 150 Gadavlv~pP~y~----~~s~~~l~~y~~~v 176 (356)
||+.+=..---++ ..+-++++..++..
T Consensus 238 Ga~~vd~tv~GlG~~aGN~~~E~lv~~L~~~ 268 (337)
T 3ble_A 238 GVKGLHASINGLGERAGNTPLEALVTTIHDK 268 (337)
T ss_dssp TCSEEEEBGGGCSSTTCBCBHHHHHHHHHHH
T ss_pred CCCEEEEecccccccccchhHHHHHHHHHHh
Confidence 9999976544332 35667777776654
No 247
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=83.32 E-value=14 Score=36.38 Aligned_cols=86 Identities=7% Similarity=-0.049 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccCc----ccccCCCHHHHHHHHHHHHHHh-----------------------------
Q 018443 75 LEAYDDLVNMQIVNGAEGMIVGGTT----GEGQLMSWDEHIMLIGHTVNCF----------------------------- 121 (356)
Q Consensus 75 ~~~l~~~v~~li~~Gv~Gl~v~Gst----GE~~~Lt~eEr~~li~~~~~~~----------------------------- 121 (356)
.+.+.+.++.+.+ ++|+|-+|-++ |-...-..+.-.++++.+.+..
T Consensus 196 ~~dy~~~a~~l~~-~aD~ieiNiscPnt~Glr~lq~~~~l~~il~~v~~~~~~~~~~~~~~~g~~~~~~~~vv~~~~~~~ 274 (443)
T 1tv5_A 196 VDDLKYCINKIGR-YADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDESTYNEDNKIVEKKNNFN 274 (443)
T ss_dssp HHHHHHHHHHHGG-GCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHHHC-------------------------
T ss_pred HHHHHHHHHHHhc-CCCEEEEeccCCCCcccccccCHHHHHHHHHHHHHHHhhhcccCccccccCHHHHHHHHHHhhccc
Confidence 4556666666554 79999887653 2222223444455666665432
Q ss_pred -------------------CCCcE-EEEecCC-CCHHHHHHHHHHHHHcCCCEEEEcCCCC
Q 018443 122 -------------------GASVK-VIGNTGS-NSTREAIHATEQGFAVGMHAALHINPYY 161 (356)
Q Consensus 122 -------------------~grvp-Vi~gvg~-~st~~ai~lar~a~~~Gadavlv~pP~y 161 (356)
..++| |++=+.. .+.++..+.++.+++.|+|++.+..-..
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~ 335 (443)
T 1tv5_A 275 KNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTT 335 (443)
T ss_dssp -------------CCCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBS
T ss_pred ccchhhhhhhhhcchhcccCCCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 12578 7776654 3456889999999999999999987654
No 248
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=83.29 E-value=4.3 Score=39.36 Aligned_cols=84 Identities=18% Similarity=0.116 Sum_probs=53.0
Q ss_pred CcEEEEe-cCCCCHHHHHHHHHHHHHcCCCEEEEcC------CC-CCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCC
Q 018443 124 SVKVIGN-TGSNSTREAIHATEQGFAVGMHAALHIN------PY-YGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQ 193 (356)
Q Consensus 124 rvpVi~g-vg~~st~~ai~lar~a~~~Gadavlv~p------P~-y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~ 193 (356)
+.++|+| ++.+|.+.+.++++.++++|+|++-... || |..++.+++ ..+.++++. +|++- -
T Consensus 142 ~~~~Iigpcsves~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl-~~L~~~~~~~Gl~~~t--e------ 212 (385)
T 3nvt_A 142 EPVFVFGPCSVESYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGL-KILKRVSDEYGLGVIS--E------ 212 (385)
T ss_dssp SCEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHH-HHHHHHHHHHTCEEEE--E------
T ss_pred CeEEEEEeCCcCCHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHH-HHHHHHHHHcCCEEEE--e------
Confidence 3456777 5677999999999999999999886653 44 333566555 555566665 45442 1
Q ss_pred CCCHHHHHHHhcCCCEEEEeecCch
Q 018443 194 DIPPRVIHTMAQSPNLAGVKECVGN 218 (356)
Q Consensus 194 ~ls~~~l~~La~~pnivGiK~s~~d 218 (356)
.++++.+..++++ +-.+|..+++
T Consensus 213 ~~d~~~~~~l~~~--vd~lkIgs~~ 235 (385)
T 3nvt_A 213 IVTPADIEVALDY--VDVIQIGARN 235 (385)
T ss_dssp CCSGGGHHHHTTT--CSEEEECGGG
T ss_pred cCCHHHHHHHHhh--CCEEEECccc
Confidence 1334444444444 4456666665
No 249
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=83.28 E-value=5.9 Score=37.35 Aligned_cols=88 Identities=6% Similarity=-0.114 Sum_probs=57.3
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccCccccc--CCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHH
Q 018443 71 GRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQ--LMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFA 148 (356)
Q Consensus 71 g~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~--~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~ 148 (356)
+..+.+....+++.+.+.|++.|-+.+.+-+.. .........+++.+.+.+ ++||+++=+-.+.+++ +.+.+
T Consensus 224 ~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~Ggi~s~~~a----~~~l~ 297 (338)
T 1z41_A 224 KGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA--DMATGAVGMITDGSMA----EEILQ 297 (338)
T ss_dssp TSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH--CCEEEECSSCCSHHHH----HHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC--CCCEEEECCCCCHHHH----HHHHH
Confidence 457888999999999999999998866542211 111111345566666666 6788864333355444 34445
Q ss_pred cC-CCEEEEcCCCCCCC
Q 018443 149 VG-MHAALHINPYYGKT 164 (356)
Q Consensus 149 ~G-adavlv~pP~y~~~ 164 (356)
.| ||.|++.-++...|
T Consensus 298 ~G~aD~V~iGR~~i~nP 314 (338)
T 1z41_A 298 NGRADLIFIGRELLRDP 314 (338)
T ss_dssp TTSCSEEEECHHHHHCT
T ss_pred cCCceEEeecHHHHhCc
Confidence 66 99999998876544
No 250
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=83.14 E-value=4.9 Score=38.27 Aligned_cols=87 Identities=14% Similarity=0.133 Sum_probs=57.6
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcc-------cccC---------CC----HHHHHHHHHHHHHHhCCCcEEEEecC
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTG-------EGQL---------MS----WDEHIMLIGHTVNCFGASVKVIGNTG 132 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstG-------E~~~---------Lt----~eEr~~li~~~~~~~~grvpVi~gvg 132 (356)
+|...+.+.++..-+.|++++-..-|+| +-.. || ..--.+++..+.+.+++++|||+.=|
T Consensus 204 ~~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GG 283 (345)
T 3oix_A 204 FDIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGG 283 (345)
T ss_dssp CCHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESS
T ss_pred CCHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEECC
Confidence 5888888888877777777765442222 1111 22 12225677777777777899987655
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCC-CCCC
Q 018443 133 SNSTREAIHATEQGFAVGMHAALHINP-YYGK 163 (356)
Q Consensus 133 ~~st~~ai~lar~a~~~Gadavlv~pP-~y~~ 163 (356)
=.+.+++.+..+ +|||+|++-.. .|..
T Consensus 284 I~s~~da~~~l~----aGAd~V~igra~~~~g 311 (345)
T 3oix_A 284 VXTGRDAFEHIL----CGASMVQIGTALHQEG 311 (345)
T ss_dssp CCSHHHHHHHHH----HTCSEEEESHHHHHHC
T ss_pred CCChHHHHHHHH----hCCCEEEEChHHHhcC
Confidence 567777777663 69999999988 4433
No 251
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=83.05 E-value=20 Score=34.22 Aligned_cols=143 Identities=13% Similarity=0.094 Sum_probs=94.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHHHHHHHHHHcCC
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 151 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai~lar~a~~~Ga 151 (356)
.|.+.+.+.+....+.|.+++=+-...+ +.++-.+.++.+.+.++.++++.+-+ ++.+.++++++++..++.|.
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~-----~~~~~~e~v~avR~a~G~~~~l~vDan~~~~~~~a~~~~~~l~~~g~ 218 (389)
T 2oz8_A 144 LDDDAFVSLFSHAASIGYSAFKIKVGHR-----DFDRDLRRLELLKTCVPAGSKVMIDPNEAWTSKEALTKLVAIREAGH 218 (389)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCS-----SHHHHHHHHHHHHTTSCTTCEEEEECTTCBCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCC-----CHHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCC
Confidence 4788899999999999999986643322 34555778888888887788988865 45589999999999999444
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhcC---CeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEEEeecCchh---hHhh
Q 018443 152 HAALHINPYYGKTSLEGLISHFDSVLSMG---PTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECVGND---RVEH 223 (356)
Q Consensus 152 davlv~pP~y~~~s~~~l~~y~~~va~~~---PiilYn~P~~tG~~ls~~~l~~La~--~pnivGiK~s~~d~---~i~~ 223 (356)
+-.++--|.- ..+ .+.+++|.+.. ||+.= +.- +++.++++.+ .-+++-+| .+-. ++.+
T Consensus 219 ~i~~iEqP~~-~~~----~~~~~~l~~~~~~iPIa~d------E~~-~~~~~~~~i~~~~~d~v~ik--GGit~a~~i~~ 284 (389)
T 2oz8_A 219 DLLWVEDPIL-RHD----HDGLRTLRHAVTWTQINSG------EYL-DLQGKRLLLEAHAADILNVH--GQVTDVMRIGW 284 (389)
T ss_dssp CCSEEESCBC-TTC----HHHHHHHHHHCCSSEEEEC------TTC-CHHHHHHHHHTTCCSEEEEC--SCHHHHHHHHH
T ss_pred CceEEeCCCC-CcC----HHHHHHHHhhCCCCCEEeC------CCC-CHHHHHHHHHcCCCCEEEEC--cCHHHHHHHHH
Confidence 3334555531 112 44556666654 44432 233 8888888873 57899999 4432 3333
Q ss_pred hh-CCCeEEEec
Q 018443 224 YT-GNGIVVWSG 234 (356)
Q Consensus 224 ~~-~~~~~v~~G 234 (356)
+. ..++.++.|
T Consensus 285 ~A~~~gi~~~~~ 296 (389)
T 2oz8_A 285 LAAELGIPISIG 296 (389)
T ss_dssp HHHHHTCCEEEC
T ss_pred HHHHcCCeEeec
Confidence 32 235566665
No 252
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=83.03 E-value=8.4 Score=36.44 Aligned_cols=104 Identities=8% Similarity=0.037 Sum_probs=69.2
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCC
Q 018443 72 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGM 151 (356)
Q Consensus 72 ~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Ga 151 (356)
.++.+.+.+.++.+.+.|++.|++.|+++|...++.+.-.++++.+.+. .+.+.+..|.. +++ .++..+++|+
T Consensus 98 ~~s~eei~~~~~~~~~~g~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~---g~~i~~t~G~l-~~e---~l~~L~~aGv 170 (369)
T 1r30_A 98 LMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAM---GLEACMTLGTL-SES---QAQRLANAGL 170 (369)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECCSSCCTTTHHHHHHHHHHHHHT---TSEEEEECSSC-CHH---HHHHHHHHCC
T ss_pred cCCHHHHHHHHHHHHHcCCcEEEEEeCCCCCCcCCHHHHHHHHHHHHHc---CCeEEEecCCC-CHH---HHHHHHHCCC
Confidence 3788999999999889999999988877676668888888888887763 34555555543 333 3444556799
Q ss_pred CEEEEcCCC----C----CCCCHHHHHHHHHHHHhc-CCe
Q 018443 152 HAALHINPY----Y----GKTSLEGLISHFDSVLSM-GPT 182 (356)
Q Consensus 152 davlv~pP~----y----~~~s~~~l~~y~~~va~~-~Pi 182 (356)
|.+.+-.-. | ...+-+++.+-++.+.+. .++
T Consensus 171 d~v~i~les~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi~v 210 (369)
T 1r30_A 171 DYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKV 210 (369)
T ss_dssp CEEECCCBSCHHHHHHHCCSSCHHHHHHHHHHHHHHHCEE
T ss_pred CEEeecCcCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCee
Confidence 988753211 1 113556666666666554 443
No 253
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=83.01 E-value=8.9 Score=34.62 Aligned_cols=162 Identities=14% Similarity=0.118 Sum_probs=103.6
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCC-CcEE--EEec--CCCCHHHHHHHHHHH
Q 018443 72 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA-SVKV--IGNT--GSNSTREAIHATEQG 146 (356)
Q Consensus 72 ~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~g-rvpV--i~gv--g~~st~~ai~lar~a 146 (356)
.-..+.++++++...+.|+.+++++-+ .+..+.+..++ .++| ++|. |..+++.-+.-++.|
T Consensus 39 ~~t~~~i~~lc~eA~~~~~~aVcV~p~--------------~v~~a~~~L~~s~v~v~tVigFP~G~~~~~~Kv~Ea~~A 104 (239)
T 3ngj_A 39 DATEEQIRKLCSEAAEYKFASVCVNPT--------------WVPLCAELLKGTGVKVCTVIGFPLGATPSEVKAYETKVA 104 (239)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEEECGG--------------GHHHHHHHHTTSSCEEEEEESTTTCCSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEECHH--------------HHHHHHHHhCCCCCeEEEEeccCCCCCchHHHHHHHHHH
Confidence 355788899999999999999998653 23334444333 4554 4454 667888889999999
Q ss_pred HHcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHhcC---Ce-EEEeCCCCCCCCCCHHHHHHHhc---CCCEEEEeecCc
Q 018443 147 FAVGMHAALHINPYY--GKTSLEGLISHFDSVLSMG---PT-IIYNVPSRTGQDIPPRVIHTMAQ---SPNLAGVKECVG 217 (356)
Q Consensus 147 ~~~Gadavlv~pP~y--~~~s~~~l~~y~~~va~~~---Pi-ilYn~P~~tG~~ls~~~l~~La~---~pnivGiK~s~~ 217 (356)
.+.|||.+-+..++- ...+.+.+.+-.++|.+++ ++ +|+. +|. |+.+.+.+.++ --+.-.||-|+|
T Consensus 105 i~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlE----t~~-Lt~eei~~a~~ia~~aGADfVKTSTG 179 (239)
T 3ngj_A 105 VEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIE----CCY-LTNEEKVEVCKRCVAAGAEYVKTSTG 179 (239)
T ss_dssp HHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECC----GGG-SCHHHHHHHHHHHHHHTCSEEECCCS
T ss_pred HHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEe----cCC-CCHHHHHHHHHHHHHHCcCEEECCCC
Confidence 999999997776642 2245677777777777652 22 2443 455 89888887764 346667899865
Q ss_pred h---------hh-HhhhhCCCeEE--EecCcc--hhHhHHHHcCCc--eeec
Q 018443 218 N---------DR-VEHYTGNGIVV--WSGNDD--QCHDARWNHGAT--GVIS 253 (356)
Q Consensus 218 d---------~~-i~~~~~~~~~v--~~G~d~--~~l~~~l~~Ga~--G~is 253 (356)
- .+ +++..++++.| -.|--+ .++ .++.+|++ |.-+
T Consensus 180 f~~ggAt~~dv~lmr~~vg~~v~VKasGGIrt~~da~-~~i~aGA~riGtS~ 230 (239)
T 3ngj_A 180 FGTHGATPEDVKLMKDTVGDKALVKAAGGIRTFDDAM-KMINNGASRIGASA 230 (239)
T ss_dssp SSSCCCCHHHHHHHHHHHGGGSEEEEESSCCSHHHHH-HHHHTTEEEEEESC
T ss_pred CCCCCCCHHHHHHHHHhhCCCceEEEeCCCCCHHHHH-HHHHhcccceeccc
Confidence 1 12 23334554444 333322 233 34688988 5433
No 254
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=82.79 E-value=6.1 Score=39.47 Aligned_cols=76 Identities=17% Similarity=0.203 Sum_probs=45.9
Q ss_pred HHHHHHHCCCCEEEEccCcccccCCCHHH-------HHHHHHHHHHHhC-CCcEEEEecCCCCHHHHHHHHHHHHHcCCC
Q 018443 81 LVNMQIVNGAEGMIVGGTTGEGQLMSWDE-------HIMLIGHTVNCFG-ASVKVIGNTGSNSTREAIHATEQGFAVGMH 152 (356)
Q Consensus 81 ~v~~li~~Gv~Gl~v~GstGE~~~Lt~eE-------r~~li~~~~~~~~-grvpVi~gvg~~st~~ai~lar~a~~~Gad 152 (356)
.++.++++|+++|.+.++.| ...+..+ ....+..+++.+. -++|||+.=|-.+..+..+ |.++|||
T Consensus 285 ~a~~l~~aGaD~I~Vg~g~G--s~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~k----ala~GAd 358 (496)
T 4fxs_A 285 GARALIEAGVSAVKVGIGPG--SICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISK----AIAAGAS 358 (496)
T ss_dssp HHHHHHHHTCSEEEECSSCC--TTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHH----HHHTTCS
T ss_pred HHHHHHHhCCCEEEECCCCC--cCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHH----HHHcCCC
Confidence 45667788999999865333 2223322 2234444555442 2689999544444555443 3557999
Q ss_pred EEEEcCCCCC
Q 018443 153 AALHINPYYG 162 (356)
Q Consensus 153 avlv~pP~y~ 162 (356)
+|++-..+..
T Consensus 359 ~V~iGs~f~~ 368 (496)
T 4fxs_A 359 CVMVGSMFAG 368 (496)
T ss_dssp EEEESTTTTT
T ss_pred eEEecHHHhc
Confidence 9999876553
No 255
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=82.78 E-value=0.81 Score=42.96 Aligned_cols=78 Identities=10% Similarity=0.079 Sum_probs=50.2
Q ss_pred HHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 159 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP 159 (356)
.+++.+.+.|+++|.+-|.+.+.. ++..-..+++. +... ++|||+.=+=.+.+++.+..+ +.|||+|++--+
T Consensus 144 ~~a~~l~~~G~d~i~v~g~~~~~~-~~~~~~~~~i~---~i~~-~ipVi~~GgI~s~~da~~~l~---~~gad~V~iGR~ 215 (318)
T 1vhn_A 144 EIYRILVEEGVDEVFIHTRTVVQS-FTGRAEWKALS---VLEK-RIPTFVSGDIFTPEDAKRALE---ESGCDGLLVARG 215 (318)
T ss_dssp HHHHHHHHTTCCEEEEESSCTTTT-TSSCCCGGGGG---GSCC-SSCEEEESSCCSHHHHHHHHH---HHCCSEEEESGG
T ss_pred HHHHHHHHhCCCEEEEcCCCcccc-CCCCcCHHHHH---HHHc-CCeEEEECCcCCHHHHHHHHH---cCCCCEEEECHH
Confidence 788888999999999977654321 11100012222 2233 899987644456666665543 359999999999
Q ss_pred CCCCCC
Q 018443 160 YYGKTS 165 (356)
Q Consensus 160 ~y~~~s 165 (356)
.+..|.
T Consensus 216 ~l~~P~ 221 (318)
T 1vhn_A 216 AIGRPW 221 (318)
T ss_dssp GTTCTT
T ss_pred HHhCcc
Confidence 887664
No 256
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=82.73 E-value=20 Score=33.39 Aligned_cols=71 Identities=11% Similarity=-0.038 Sum_probs=45.2
Q ss_pred HHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHH----HHHhC--CCcEEEEecCCCCHHHHHHHHHHHHHcCCC
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHT----VNCFG--ASVKVIGNTGSNSTREAIHATEQGFAVGMH 152 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~----~~~~~--grvpVi~gvg~~st~~ai~lar~a~~~Gad 152 (356)
.++++.++++|++++.+.-+.|- .||.+...+.+.-. ++.++ +.+|++..+.+. .. +.....+.|+|
T Consensus 182 ~~~~~~~~~aGad~i~i~d~~~~--~lsp~~f~ef~~p~~k~i~~~i~~~~g~~~i~~~~g~--~~---~l~~l~~~g~d 254 (338)
T 2eja_A 182 LAYLKEQIKAGADVVQIFDSWVN--NLSLEDYGEYVYPYVNYLISELKDFSDTPVIYFFRGS--SS---FIDLAVDYRAD 254 (338)
T ss_dssp HHHHHHHHHTTCSEEEEEETTGG--GSCHHHHHHHTHHHHHHHHHHHHHHCCCCEEEEESSH--HH---HHHHHTTSCCS
T ss_pred HHHHHHHHHhCCCEEEEecCccc--cCCHHHHHHHhHHHHHHHHHHHhhcCCCCEEEEcCCc--HH---HHHHHHHcCCC
Confidence 34555677899999988877664 78988876654322 22221 247888775432 33 34456778999
Q ss_pred EEEE
Q 018443 153 AALH 156 (356)
Q Consensus 153 avlv 156 (356)
++-+
T Consensus 255 ~~~~ 258 (338)
T 2eja_A 255 ALSV 258 (338)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 7654
No 257
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=82.72 E-value=4.2 Score=41.20 Aligned_cols=87 Identities=15% Similarity=0.208 Sum_probs=60.3
Q ss_pred HHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 159 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP 159 (356)
..++.+.+.|++.|++.+-+-++..--. -.++++.+.+.+ ++|||+.=|-.+.++..++.+. .|+|++++..-
T Consensus 456 e~a~~~~~~Ga~~il~t~~~~dG~~~G~--d~~li~~l~~~~--~iPVIasGGi~s~~d~~~~~~~---~G~~gvivg~a 528 (555)
T 1jvn_A 456 ELTRACEALGAGEILLNCIDKDGSNSGY--DLELIEHVKDAV--KIPVIASSGAGVPEHFEEAFLK---TRADACLGAGM 528 (555)
T ss_dssp HHHHHHHHTTCCEEEECCGGGTTTCSCC--CHHHHHHHHHHC--SSCEEECSCCCSHHHHHHHHHH---SCCSEEEESHH
T ss_pred HHHHHHHHcCCCEEEEeCCCCCCCCCCC--CHHHHHHHHHhC--CccEEEECCCCCHHHHHHHHHh---cCChHHHHHHH
Confidence 5677778899999998775544432211 145555555554 6899997676677777665543 69999999887
Q ss_pred CCCC-CCHHHHHHHH
Q 018443 160 YYGK-TSLEGLISHF 173 (356)
Q Consensus 160 ~y~~-~s~~~l~~y~ 173 (356)
+|.. .+-+++.+|.
T Consensus 529 ~~~~~~~~~e~~~~l 543 (555)
T 1jvn_A 529 FHRGEFTVNDVKEYL 543 (555)
T ss_dssp HHTTSCCHHHHHHHH
T ss_pred HHcCCCCHHHHHHHH
Confidence 6644 5778877764
No 258
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=82.70 E-value=4.1 Score=36.23 Aligned_cols=77 Identities=6% Similarity=-0.004 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEE
Q 018443 77 AYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALH 156 (356)
Q Consensus 77 ~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv 156 (356)
...+.++.+.+.|++.+.+..-.+.+. ......++++.+.+.+ ++||+++-+-++. +.++.+.+.|||++++
T Consensus 32 d~~~~a~~~~~~Gad~i~v~d~~~~~~--~~~~~~~~i~~i~~~~--~iPvi~~Ggi~~~----~~~~~~~~~Gad~V~l 103 (252)
T 1ka9_F 32 DPVEAARAYDEAGADELVFLDISATHE--ERAILLDVVARVAERV--FIPLTVGGGVRSL----EDARKLLLSGADKVSV 103 (252)
T ss_dssp CHHHHHHHHHHHTCSCEEEEECCSSTT--CHHHHHHHHHHHHTTC--CSCEEEESSCCSH----HHHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEEcCCcccc--CccccHHHHHHHHHhC--CCCEEEECCcCCH----HHHHHHHHcCCCEEEE
Confidence 345667778889999998765443321 2333445555555433 6899987666554 3566666779999998
Q ss_pred cCCCC
Q 018443 157 INPYY 161 (356)
Q Consensus 157 ~pP~y 161 (356)
....+
T Consensus 104 g~~~l 108 (252)
T 1ka9_F 104 NSAAV 108 (252)
T ss_dssp CHHHH
T ss_pred ChHHH
Confidence 75544
No 259
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=82.46 E-value=4.2 Score=37.94 Aligned_cols=112 Identities=11% Similarity=0.116 Sum_probs=79.5
Q ss_pred eeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccC-ccc-----c--cCCCHHHHHHHHHHHHHHhCCCcEEEEec--
Q 018443 62 AIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGT-TGE-----G--QLMSWDEHIMLIGHTVNCFGASVKVIGNT-- 131 (356)
Q Consensus 62 al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~Gs-tGE-----~--~~Lt~eEr~~li~~~~~~~~grvpVi~gv-- 131 (356)
.++|.+|. ...++++ +.|++.+++.|+ .+- - -.+|.+|....++.+.+.+. .||++-.
T Consensus 20 ~~~~a~D~-------~sA~~~~---~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~--~PviaD~d~ 87 (295)
T 1xg4_A 20 QIVGTINA-------NHALLAQ---RAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCS--LPLLVDADI 87 (295)
T ss_dssp EEEECSSH-------HHHHHHH---HTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCC--SCEEEECTT
T ss_pred EEecCcCH-------HHHHHHH---HcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCC--CCEEecCCc
Confidence 45777752 2233433 579999999887 332 1 35899999999999888764 6999865
Q ss_pred C-CCCHHHHHHHHHHHHHcCCCEEEEcC----CCC---C---CCCHHHHHHHHHHHHhc---CCeEEE
Q 018443 132 G-SNSTREAIHATEQGFAVGMHAALHIN----PYY---G---KTSLEGLISHFDSVLSM---GPTIIY 185 (356)
Q Consensus 132 g-~~st~~ai~lar~a~~~Gadavlv~p----P~y---~---~~s~~~l~~y~~~va~~---~PiilY 185 (356)
| +.+..++.+.++...++|+++|-+-- |-. . -.++++..+-.+++.++ .++++.
T Consensus 88 Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~ 155 (295)
T 1xg4_A 88 GFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIM 155 (295)
T ss_dssp CSSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEE
T ss_pred ccCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 3 33789999999999999999998743 221 1 24677777777877776 355554
No 260
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=82.40 E-value=24 Score=33.62 Aligned_cols=125 Identities=11% Similarity=0.050 Sum_probs=90.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHHHHHHHHHHcCCC
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGMH 152 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai~lar~a~~~Gad 152 (356)
|.+.+.+.++...+.|.+++=+-... + +.++ .++++.+.+.++.++++.+=+ ++.+.++++++++..++.|++
T Consensus 164 ~~e~~~~~a~~~~~~Gf~~vKik~g~-~----~~~~-~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~ 237 (388)
T 2nql_A 164 TLKARGELAKYWQDRGFNAFKFATPV-A----DDGP-AAEIANLRQVLGPQAKIAADMHWNQTPERALELIAEMQPFDPW 237 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGG-C----TTCH-HHHHHHHHHHHCTTSEEEEECCSCSCHHHHHHHHHHHGGGCCS
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCCC-C----ChHH-HHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCC
Confidence 78889999999999999998654321 2 2456 888888888888889998865 455899999999999999988
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEEEeecCc
Q 018443 153 AALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECVG 217 (356)
Q Consensus 153 avlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~--~pnivGiK~s~~ 217 (356)
.+ --|.- +. -.+.++++.+. .||+.=. .-.+++.++++.+ .-+++.+|-+-|
T Consensus 238 ~i--EqP~~--~~---d~~~~~~l~~~~~iPI~~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~G 293 (388)
T 2nql_A 238 FA--EAPVW--TE---DIAGLEKVSKNTDVPIAVGE------EWRTHWDMRARIERCRIAIVQPEMGHK 293 (388)
T ss_dssp CE--ECCSC--TT---CHHHHHHHHTSCCSCEEECT------TCCSHHHHHHHHTTSCCSEECCCHHHH
T ss_pred EE--ECCCC--hh---hHHHHHHHHhhCCCCEEEeC------CcCCHHHHHHHHHcCCCCEEEecCCCC
Confidence 65 34531 11 25566777776 4666432 2346888888874 468899987653
No 261
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=82.37 E-value=33 Score=32.16 Aligned_cols=126 Identities=10% Similarity=0.015 Sum_probs=90.7
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHHHHHHHHHHcCC
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 151 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai~lar~a~~~Ga 151 (356)
-|.+.+.+.+....+.|.+++=+-...+ +.++=.++++.+.+.++.++++.+-+ ++.+.++++++++..++.|+
T Consensus 143 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~-----~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i 217 (359)
T 1mdl_A 143 DGVKLATERAVTAAELGFRAVKTRIGYP-----ALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGV 217 (359)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCCS-----SHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCC-----CHHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCC
Confidence 4677888888999999999987654322 34666788888888888889998865 45589999999999999999
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEEEeecC
Q 018443 152 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV 216 (356)
Q Consensus 152 davlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~--~pnivGiK~s~ 216 (356)
+.+ --|+ .+. =.+.++++.+. .||+.=. .-.+++.++++.+ .-+++-+|-+-
T Consensus 218 ~~i--E~P~--~~~---~~~~~~~l~~~~~iPI~~de------~~~~~~~~~~~i~~~~~d~v~ik~~~ 273 (359)
T 1mdl_A 218 TWI--EEPT--LQH---DYEGHQRIQSKLNVPVQMGE------NWLGPEEMFKALSIGACRLAMPDAMK 273 (359)
T ss_dssp SCE--ECCS--CTT---CHHHHHHHHHTCSSCEEECT------TCCSHHHHHHHHHTTCCSEECCBTTT
T ss_pred CeE--ECCC--Chh---hHHHHHHHHHhCCCCEEeCC------CCCCHHHHHHHHHcCCCCEEeecchh
Confidence 865 3443 111 14556777765 5766432 3356888888864 46888899764
No 262
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=82.36 E-value=8.2 Score=39.05 Aligned_cols=98 Identities=11% Similarity=0.149 Sum_probs=76.5
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCC
Q 018443 72 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGM 151 (356)
Q Consensus 72 ~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Ga 151 (356)
.-|.+-+.++++.+.+.|++-|.++-|+|= +++.+-.++++.+.+.++.++|+=+++ +++.--++.-+-.|.++||
T Consensus 171 ~~~~e~~~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p~~i~I~~H~-Hnd~GlAvAN~laAveAGa 246 (539)
T 1rqb_A 171 VHTVEGYVKLAGQLLDMGADSIALKDMAAL---LKPQPAYDIIKAIKDTYGQKTQINLHC-HSTTGVTEVSLMKAIEAGV 246 (539)
T ss_dssp TCCHHHHHHHHHHHHHTTCSEEEEEETTCC---CCHHHHHHHHHHHHHHHCTTCCEEEEE-BCTTSCHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCCCCCC---cCHHHHHHHHHHHHHhcCCCceEEEEe-CCCCChHHHHHHHHHHhCC
Confidence 458999999999999999999999889885 789999999999999886456766654 5677788889999999999
Q ss_pred CEEEEc-CCCC---CCCCHHHHHHHH
Q 018443 152 HAALHI-NPYY---GKTSLEGLISHF 173 (356)
Q Consensus 152 davlv~-pP~y---~~~s~~~l~~y~ 173 (356)
|.|=.. .|+- +.++-+.++..+
T Consensus 247 ~~VD~ti~g~GertGN~~lE~lv~~L 272 (539)
T 1rqb_A 247 DVVDTAISSMSLGPGHNPTESVAEML 272 (539)
T ss_dssp SEEEEBCGGGCSTTSBCBHHHHHHHT
T ss_pred CEEEEeccccCCCccChhHHHHHHHH
Confidence 998654 3432 224445555444
No 263
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=82.35 E-value=19 Score=36.61 Aligned_cols=132 Identities=13% Similarity=0.099 Sum_probs=89.2
Q ss_pred eeEeeecccCC----CCCCCHHHH----HHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEe
Q 018443 59 LITAIKTPYLP----DGRFDLEAY----DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGN 130 (356)
Q Consensus 59 vi~al~TPf~~----dg~ID~~~l----~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~g 130 (356)
++...+-|+.. .|.++++.+ +..++.+++.|||.+++ | ..-+.+|-+.+++.+.+... ++|+++.
T Consensus 101 ~VAGsiGP~g~~~~~~~~~~~~e~~~~~~~qi~~l~~~gvD~l~~-----E-T~~~~~Ea~aa~~a~~~~~~-~~Pv~vS 173 (566)
T 1q7z_A 101 LVFGDIGPTGELPYPLGSTLFEEFYENFRETVEIMVEEGVDGIIF-----E-TFSDILELKAAVLAAREVSR-DVFLIAH 173 (566)
T ss_dssp EEEEEECCCSCCBTTTSSBCHHHHHHHHHHHHHHHHHTTCSEEEE-----E-EECCHHHHHHHHHHHHHHCS-SSCEEEE
T ss_pred eEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEE-----e-ccCCHHHHHHHHHHHHHhCC-CCcEEEE
Confidence 67777777653 366777664 55667778999999975 3 12367777777777665433 6799887
Q ss_pred cC---------CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCC-------CCC
Q 018443 131 TG---------SNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPS-------RTG 192 (356)
Q Consensus 131 vg---------~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~-------~tG 192 (356)
.+ +.+.++++...+ +.|++++.+=.- ..++.+..+.+.+... .|+++|=|.+ .+.
T Consensus 174 ~t~~~~g~~~~G~~~~~~~~~l~---~~~~~avG~NC~----~gp~~~~~~l~~l~~~~~~p~~vyPNaG~p~~~~~~~~ 246 (566)
T 1q7z_A 174 MTFDEKGRSLTGTDPANFAITFD---ELDIDALGINCS----LGPEEILPIFQELSQYTDKFLVVEPNAGKPIVENGKTV 246 (566)
T ss_dssp ECCCTTSCCTTSCCHHHHHHHHH---TSSCSEEEEESS----SCHHHHHHHHHHHHHTCCSEEEEECCSSSCEEETTEEE
T ss_pred EEEcCCCeeCCCCcHHHHHHHhh---ccCCCEEEEeCC----CCHHHHHHHHHHHHhcCCCEEEEEcCCCCCcccCCccc
Confidence 64 235666666554 478998887431 3478899999999875 6999997632 223
Q ss_pred CCCCHHHHHHHh
Q 018443 193 QDIPPRVIHTMA 204 (356)
Q Consensus 193 ~~ls~~~l~~La 204 (356)
++.+|+.+.+.+
T Consensus 247 ~~~~p~~~a~~~ 258 (566)
T 1q7z_A 247 YPLKPHDFAVHI 258 (566)
T ss_dssp CCCCHHHHHTTH
T ss_pred cCCCHHHHHHHH
Confidence 456787665544
No 264
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=82.31 E-value=27 Score=33.48 Aligned_cols=134 Identities=13% Similarity=0.109 Sum_probs=91.8
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccC----ccc-----------ccCC---CHHHHHHHHHHHHHHhCCCcEEEEec
Q 018443 70 DGRFDLEAYDDLVNMQIVNGAEGMIVGGT----TGE-----------GQLM---SWDEHIMLIGHTVNCFGASVKVIGNT 131 (356)
Q Consensus 70 dg~ID~~~l~~~v~~li~~Gv~Gl~v~Gs----tGE-----------~~~L---t~eEr~~li~~~~~~~~grvpVi~gv 131 (356)
+...+.+.+.+.+....+.|.+++=+-.. .|- +-+. ..++=.++++.+.+.++.++++.+-+
T Consensus 146 ~~~~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vDa 225 (410)
T 2gl5_A 146 HILVTPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGDDADIIVEI 225 (410)
T ss_dssp SCCCSHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 44578999999999999999999866431 231 1122 22444677888888888889998865
Q ss_pred -CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--C
Q 018443 132 -GSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--S 206 (356)
Q Consensus 132 -g~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~--~ 206 (356)
++.+.++++++++..++.|++. +--|.- ..+ .+.+++|.+. .||+.=. .-.+++.++++.+ .
T Consensus 226 n~~~~~~~ai~~~~~l~~~~i~~--iE~P~~-~~~----~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~i~~~~ 292 (410)
T 2gl5_A 226 HSLLGTNSAIQFAKAIEKYRIFL--YEEPIH-PLN----SDNMQKVSRSTTIPIATGE------RSYTRWGYRELLEKQS 292 (410)
T ss_dssp TTCSCHHHHHHHHHHHGGGCEEE--EECSSC-SSC----HHHHHHHHHHCSSCEEECT------TCCTTHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHhcCCCe--EECCCC-hhh----HHHHHHHHhhCCCCEEecC------CcCCHHHHHHHHHcCC
Confidence 4558999999999999988764 444532 112 4556777665 5776543 2235678888873 5
Q ss_pred CCEEEEeecC
Q 018443 207 PNLAGVKECV 216 (356)
Q Consensus 207 pnivGiK~s~ 216 (356)
-+++-+|-+-
T Consensus 293 ~d~v~ik~~~ 302 (410)
T 2gl5_A 293 IAVAQPDLCL 302 (410)
T ss_dssp CSEECCCTTT
T ss_pred CCEEecCccc
Confidence 6888899754
No 265
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=82.25 E-value=15 Score=34.80 Aligned_cols=71 Identities=13% Similarity=-0.033 Sum_probs=46.0
Q ss_pred HHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHH----HHHHhC------C--CcEEEEecCCCCHHHHHHHHHHH
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGH----TVNCFG------A--SVKVIGNTGSNSTREAIHATEQG 146 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~----~~~~~~------g--rvpVi~gvg~~st~~ai~lar~a 146 (356)
.++++.++++|++++.+.-+.| ..||.+...+.+.- +++.++ | .+|+|..+.+. .. +....
T Consensus 200 ~~~~~~~i~aGad~i~i~D~~~--~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~G~--~~---~l~~l 272 (367)
T 1r3s_A 200 VPYLVGQVVAGAQALQLFESHA--GHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDG--HF---ALEEL 272 (367)
T ss_dssp HHHHHHHHHTTCSEEEEEETTG--GGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEEEEETTC--GG---GHHHH
T ss_pred HHHHHHHHHhCCCEEEEecCcc--ccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeEEEcCCc--HH---HHHHH
Confidence 3445567789999999888877 37999887665422 233333 3 47888766543 22 33456
Q ss_pred HHcCCCEEEE
Q 018443 147 FAVGMHAALH 156 (356)
Q Consensus 147 ~~~Gadavlv 156 (356)
.+.|+|++-+
T Consensus 273 ~~~g~d~i~~ 282 (367)
T 1r3s_A 273 AQAGYEVVGL 282 (367)
T ss_dssp TTSSCSEEEC
T ss_pred HhcCCCEEEe
Confidence 6789987654
No 266
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=82.18 E-value=5.1 Score=37.79 Aligned_cols=67 Identities=18% Similarity=0.123 Sum_probs=47.7
Q ss_pred HHHHHHHHCC--CCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEe-cCCCCHHHHHHHHHHHHHcCCCEEEE
Q 018443 80 DLVNMQIVNG--AEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGN-TGSNSTREAIHATEQGFAVGMHAALH 156 (356)
Q Consensus 80 ~~v~~li~~G--v~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~g-vg~~st~~ai~lar~a~~~Gadavlv 156 (356)
+.++.+++.| ++.+.++...| ..+.-.++++.+.+.++ ..+|+.| +. + .+.|+.+.++|||++.+
T Consensus 109 ~~a~~~~~~g~~~~~i~i~~~~G-----~~~~~~~~i~~lr~~~~-~~~vi~G~v~--s----~e~A~~a~~aGad~Ivv 176 (336)
T 1ypf_A 109 EFVQQLAAEHLTPEYITIDIAHG-----HSNAVINMIQHIKKHLP-ESFVIAGNVG--T----PEAVRELENAGADATKV 176 (336)
T ss_dssp HHHHHHHHTTCCCSEEEEECSSC-----CSHHHHHHHHHHHHHCT-TSEEEEEEEC--S----HHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHhcCCCCCEEEEECCCC-----CcHHHHHHHHHHHHhCC-CCEEEECCcC--C----HHHHHHHHHcCCCEEEE
Confidence 4477788889 88887755444 33455667777777764 3678877 43 2 46788999999999999
Q ss_pred cC
Q 018443 157 IN 158 (356)
Q Consensus 157 ~p 158 (356)
..
T Consensus 177 s~ 178 (336)
T 1ypf_A 177 GI 178 (336)
T ss_dssp CS
T ss_pred ec
Confidence 53
No 267
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=82.12 E-value=5.7 Score=35.81 Aligned_cols=55 Identities=13% Similarity=0.146 Sum_probs=42.6
Q ss_pred ecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCC------------------CCHHHHHHHHHHHHhc--CCeEE
Q 018443 130 NTGSNSTREAIHATEQGFAVGMHAALHINPYYGK------------------TSLEGLISHFDSVLSM--GPTII 184 (356)
Q Consensus 130 gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~~------------------~s~~~l~~y~~~va~~--~Piil 184 (356)
-.+..+.++.++.++.+++.|+|.+-+-.|+--+ .+.+...+..+++.+. .|+++
T Consensus 25 ~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~Pv~~ 99 (262)
T 1rd5_A 25 TAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPVVL 99 (262)
T ss_dssp ETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSCEEE
T ss_pred eCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEE
Confidence 3567778999999999999999999998887521 3556667777777665 69876
No 268
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=82.07 E-value=26 Score=33.47 Aligned_cols=144 Identities=11% Similarity=0.063 Sum_probs=98.1
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEE-Eec-CCCCHHHHHHHHHHHHHcC
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVI-GNT-GSNSTREAIHATEQGFAVG 150 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi-~gv-g~~st~~ai~lar~a~~~G 150 (356)
-+.+.+.+.++.+++.|.+.+=+--.. +.++=.+.++.+.+.++.+++++ +=+ ++-+.++++++++..++.|
T Consensus 141 ~~~e~~~~~a~~~~~~G~~~~KiKvG~------~~~~d~~~v~avR~a~g~~~~l~~vDan~~~~~~~A~~~~~~l~~~~ 214 (391)
T 3gd6_A 141 EEVESNLDVVRQKLEQGFDVFRLYVGK------NLDADEEFLSRVKEEFGSRVRIKSYDFSHLLNWKDAHRAIKRLTKYD 214 (391)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEECSS------CHHHHHHHHHHHHHHHGGGCEEEEEECTTCSCHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeCC------CHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCHHHHHHHHHHHHhcC
Confidence 457888889999999999998553221 46777888888888888888888 754 4568999999999999999
Q ss_pred CCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEEEeecC--chh---hH
Q 018443 151 MHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV--GND---RV 221 (356)
Q Consensus 151 adavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~--~pnivGiK~s~--~d~---~i 221 (356)
++...+--|.- +. . .+.+++|.+. .|| + ....+++.+.++.+ .-.++-+|-+- |-. ++
T Consensus 215 i~~~~iEqP~~--~~--d-~~~~~~l~~~~~iPI---d-----E~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 281 (391)
T 3gd6_A 215 LGLEMIESPAP--RN--D-FDGLYQLRLKTDYPI---S-----EHVWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKA 281 (391)
T ss_dssp SSCCEEECCSC--TT--C-HHHHHHHHHHCSSCE---E-----EECCCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred CCcceecCCCC--hh--h-HHHHHHHHHHcCCCc---C-----CCCCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHH
Confidence 83334445542 11 1 4556777776 466 3 23466888888873 57889999654 222 33
Q ss_pred hhhh-CCCeEEEecC
Q 018443 222 EHYT-GNGIVVWSGN 235 (356)
Q Consensus 222 ~~~~-~~~~~v~~G~ 235 (356)
..+. ..++.++.|.
T Consensus 282 a~~A~~~gi~~~~~~ 296 (391)
T 3gd6_A 282 AYAAEVASKDVVLGT 296 (391)
T ss_dssp HHHHHHTTCEEEECC
T ss_pred HHHHHHcCCEEEecC
Confidence 3332 2456666553
No 269
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=82.03 E-value=26 Score=31.68 Aligned_cols=104 Identities=13% Similarity=0.022 Sum_probs=61.1
Q ss_pred CCCHHHHHHHHHHHHHCC-CCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec----CCCCHHHHHHHHHHH
Q 018443 72 RFDLEAYDDLVNMQIVNG-AEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT----GSNSTREAIHATEQG 146 (356)
Q Consensus 72 ~ID~~~l~~~v~~li~~G-v~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv----g~~st~~ai~lar~a 146 (356)
+.+.+...++++..++.| ++-+=+ |...-. ...++++.+. .++++||+.- +..+.++.+++.+++
T Consensus 96 ~~~~~~~~~ll~~~~~~g~~d~iDv-----El~~~~--~~~~l~~~~~---~~~~kvI~S~Hdf~~tP~~~el~~~~~~~ 165 (257)
T 2yr1_A 96 PLNEAEVRRLIEAICRSGAIDLVDY-----ELAYGE--RIADVRRMTE---ECSVWLVVSRHYFDGTPRKETLLADMRQA 165 (257)
T ss_dssp SSCHHHHHHHHHHHHHHTCCSEEEE-----EGGGTT--HHHHHHHHHH---HTTCEEEEEEEESSCCCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCCEEEE-----ECCCCh--hHHHHHHHHH---hCCCEEEEEecCCCCCcCHHHHHHHHHHH
Confidence 457777777777777776 776655 333211 3334443322 3466777764 345677888888888
Q ss_pred HHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHh-----cCCeEEEeCC
Q 018443 147 FAVGMHAALHINPYYGKTSLEGLISHFDSVLS-----MGPTIIYNVP 188 (356)
Q Consensus 147 ~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~-----~~PiilYn~P 188 (356)
++.|||-+=+.... .+.++..+-++...+ ..|+|.|+.-
T Consensus 166 ~~~gaDivKia~~a---~s~~D~l~ll~~~~~~~~~~~~P~I~~~MG 209 (257)
T 2yr1_A 166 ERYGADIAKVAVMP---KSPEDVLVLLQATEEARRELAIPLITMAMG 209 (257)
T ss_dssp HHTTCSEEEEEECC---SSHHHHHHHHHHHHHHHHHCSSCEEEEECT
T ss_pred HhcCCCEEEEEecc---CCHHHHHHHHHHHHHHhccCCCCEEEEECC
Confidence 88888877333221 244554444433322 1588888853
No 270
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=81.99 E-value=9.6 Score=37.94 Aligned_cols=75 Identities=16% Similarity=0.231 Sum_probs=46.1
Q ss_pred HHHHHHHCCCCEEEEccCcccccCCCHHH-------HHHHHHHHHHHhC-CCcEEEEecCCCCHHHHHHHHHHHHHcCCC
Q 018443 81 LVNMQIVNGAEGMIVGGTTGEGQLMSWDE-------HIMLIGHTVNCFG-ASVKVIGNTGSNSTREAIHATEQGFAVGMH 152 (356)
Q Consensus 81 ~v~~li~~Gv~Gl~v~GstGE~~~Lt~eE-------r~~li~~~~~~~~-grvpVi~gvg~~st~~ai~lar~a~~~Gad 152 (356)
.++.+++.|+++|.+.+ |.+...+..+ ....+..+++.+. .++|||+.=|-.+..++.+ |.++|||
T Consensus 283 ~a~~l~~aGaD~I~vg~--g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~k----al~~GAd 356 (490)
T 4avf_A 283 AAKALAEAGADAVKVGI--GPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAK----AMVAGAY 356 (490)
T ss_dssp HHHHHHHTTCSEEEECS--SCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHH----HHHHTCS
T ss_pred HHHHHHHcCCCEEEECC--CCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHH----HHHcCCC
Confidence 45778889999999843 3333322222 2344555555543 3799998444434555444 3457999
Q ss_pred EEEEcCCCC
Q 018443 153 AALHINPYY 161 (356)
Q Consensus 153 avlv~pP~y 161 (356)
+|++-..+.
T Consensus 357 ~V~vGs~~~ 365 (490)
T 4avf_A 357 CVMMGSMFA 365 (490)
T ss_dssp EEEECTTTT
T ss_pred eeeecHHHh
Confidence 999997654
No 271
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=81.99 E-value=26 Score=30.86 Aligned_cols=132 Identities=6% Similarity=-0.034 Sum_probs=75.6
Q ss_pred HHHHHHHHHHCCCCEEEEccCccccc---CCCHHHHHHHHHHHHHHhCCCcE-EEEe------cCCCC-------HHHHH
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQ---LMSWDEHIMLIGHTVNCFGASVK-VIGN------TGSNS-------TREAI 140 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~---~Lt~eEr~~li~~~~~~~~grvp-Vi~g------vg~~s-------t~~ai 140 (356)
+...++...+.|.++|=+.......+ .++.++..++-+.+.+ .+=++. +.++ .++.+ .+...
T Consensus 14 l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~~~~~~~~~~~~~~l~~~~~~~r~~~~~~~~ 92 (285)
T 1qtw_A 14 LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEK-YHYTSAQILPHDSYLINLGHPVTEALEKSRDAFI 92 (285)
T ss_dssp HHHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHH-TTCCGGGBCCBCCTTCCTTCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHH-cCCCceeEEecCCcccccCCCCHHHHHHHHHHHH
Confidence 77888888999999997743333222 3677777666655543 221210 2221 22222 23344
Q ss_pred HHHHHHHHcCCCEEEEcCCCCCCC-CH----HHHHHHHHHHHhc---CCeEEEeCCCCC-CCCCCHHHHHHHh-cC---C
Q 018443 141 HATEQGFAVGMHAALHINPYYGKT-SL----EGLISHFDSVLSM---GPTIIYNVPSRT-GQDIPPRVIHTMA-QS---P 207 (356)
Q Consensus 141 ~lar~a~~~Gadavlv~pP~y~~~-s~----~~l~~y~~~va~~---~PiilYn~P~~t-G~~ls~~~l~~La-~~---p 207 (356)
+.++.|+++|+..+.+.+.+.... +. +.+.+.++.+++. +.+.+=|.+... ...-+++.+.+|. ++ |
T Consensus 93 ~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~a~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~v~~~~ 172 (285)
T 1qtw_A 93 DEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKS 172 (285)
T ss_dssp HHHHHHHHTTCCEEEECCCBCTTTSCHHHHHHHHHHHHHHHHHHCSSCEEEEECCCCCTTBCCSSHHHHHHHHHHCSCGG
T ss_pred HHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHhccCCCEEEEecCCCCCCcccCCHHHHHHHHHhhcCcc
Confidence 567788899999998776544322 33 2345666666543 356666665322 1223678788877 34 5
Q ss_pred CEE
Q 018443 208 NLA 210 (356)
Q Consensus 208 niv 210 (356)
|+-
T Consensus 173 ~~g 175 (285)
T 1qtw_A 173 RVG 175 (285)
T ss_dssp GEE
T ss_pred ceE
Confidence 653
No 272
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=81.82 E-value=22 Score=31.12 Aligned_cols=130 Identities=7% Similarity=-0.056 Sum_probs=71.4
Q ss_pred HHHHHHHHHHCCCCEEEEc-cCcccccCCCHHHHHHHHHHHHHHhCCCcEEE-Eec----CCCC-------HHHHHHHHH
Q 018443 78 YDDLVNMQIVNGAEGMIVG-GTTGEGQLMSWDEHIMLIGHTVNCFGASVKVI-GNT----GSNS-------TREAIHATE 144 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~-GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi-~gv----g~~s-------t~~ai~lar 144 (356)
+...++.+.+.|.+||=+. ..... ..++.++..++ +..++.. .+.+. ++. ++.+ .+...+.++
T Consensus 16 ~~~~l~~~~~~G~~~vEl~~~~~~~-~~~~~~~~~~~-~~~l~~~--gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 91 (278)
T 1i60_A 16 LKLDLELCEKHGYDYIEIRTMDKLP-EYLKDHSLDDL-AEYFQTH--HIKPLALNALVFFNNRDEKGHNEIITEFKGMME 91 (278)
T ss_dssp HHHHHHHHHHTTCSEEEEETTTHHH-HHTTSSCHHHH-HHHHHTS--SCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEccHHHHH-HHhccCCHHHH-HHHHHHc--CCCeeeeccccccccCCHHHHHHHHHHHHHHHH
Confidence 5667777788999999765 33211 01122222233 2333332 34443 222 2112 344566778
Q ss_pred HHHHcCCCEEEEcCCCCCC-CC-H---HHHHHHHHHHHhc-----CCeEEEeCCCCCCCCCCHHHHHHHhc---CCCEEE
Q 018443 145 QGFAVGMHAALHINPYYGK-TS-L---EGLISHFDSVLSM-----GPTIIYNVPSRTGQDIPPRVIHTMAQ---SPNLAG 211 (356)
Q Consensus 145 ~a~~~Gadavlv~pP~y~~-~s-~---~~l~~y~~~va~~-----~PiilYn~P~~tG~~ls~~~l~~La~---~pnivG 211 (356)
.|+++|++.+.+.++.... .+ + +.+.+.++.+++. +.+.+-|.+......-+++.+.+|.+ .||+.-
T Consensus 92 ~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~l~~~~~~~~~g~ 171 (278)
T 1i60_A 92 TCKTLGVKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIALEFVGHPQCTVNTFEQAYEIVNTVNRDNVGL 171 (278)
T ss_dssp HHHHHTCCEEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCTTBSSCSHHHHHHHHHHHCCTTEEE
T ss_pred HHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEecCCccchhcCHHHHHHHHHHhCCCCeeE
Confidence 8889999999886544321 23 2 3456666666543 46778887643213346777777763 467543
No 273
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=81.81 E-value=3.8 Score=36.44 Aligned_cols=136 Identities=8% Similarity=0.015 Sum_probs=74.0
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEE-e----------cCCCCHHHHHH
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG-N----------TGSNSTREAIH 141 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~-g----------vg~~st~~ai~ 141 (356)
-|.+...+.++.+++.+++|+++.+...+...-..+ .++.+.+ .++||+. + |+....+-.-.
T Consensus 55 ~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~----~~~~~~~---~~iPvV~~~~~~~~~~~~~V~~d~~~~~~~ 127 (298)
T 3tb6_A 55 NNPDNERRGLENLLSQHIDGLIVEPTKSALQTPNIG----YYLNLEK---NGIPFAMINASYAELAAPSFTLDDVKGGMM 127 (298)
T ss_dssp TCHHHHHHHHHHHHHTCCSEEEECCSSTTSCCTTHH----HHHHHHH---TTCCEEEESSCCTTCSSCEEEECHHHHHHH
T ss_pred CChHHHHHHHHHHHHCCCCEEEEecccccccCCcHH----HHHHHHh---cCCCEEEEecCcCCCCCCEEEeCcHHHHHH
Confidence 366778899999999999999998876654433333 2222222 3567643 2 22234555667
Q ss_pred HHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CC---eEEEeCCCCCCCCCCHHHHHHHh-cCCC--EEEEee
Q 018443 142 ATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GP---TIIYNVPSRTGQDIPPRVIHTMA-QSPN--LAGVKE 214 (356)
Q Consensus 142 lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~P---iilYn~P~~tG~~ls~~~l~~La-~~pn--ivGiK~ 214 (356)
.+++..+.|..-+.++...-...+.+-...|.+.+.+. .+ ..+...+......-..+.+.++. ++|. +.+|=-
T Consensus 128 a~~~L~~~G~~~i~~i~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ai~~ 207 (298)
T 3tb6_A 128 AAEHLLSLGHTHMMGIFKADDTQGVKRMNGFIQAHRERELFPSPDMIVTFTTEEKESKLLEKVKATLEKNSKHMPTAILC 207 (298)
T ss_dssp HHHHHHHTTCCSEEEEEESSSHHHHHHHHHHHHHHHHTTCCCCGGGEEEECHHHHTTHHHHHHHHHHHHTTTSCCSEEEC
T ss_pred HHHHHHHCCCCcEEEEcCCCCccHHHHHHHHHHHHHHcCCCCCcceEEEecccchhhhHHHHHHHHHhcCCCCCCeEEEE
Confidence 77888888987665553222122234444455555554 32 22222221111110135566655 5776 777654
Q ss_pred c
Q 018443 215 C 215 (356)
Q Consensus 215 s 215 (356)
.
T Consensus 208 ~ 208 (298)
T 3tb6_A 208 Y 208 (298)
T ss_dssp S
T ss_pred e
Confidence 3
No 274
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=81.75 E-value=26 Score=30.66 Aligned_cols=122 Identities=11% Similarity=-0.011 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEE-ec-CCCCHHHHHHHHHHHHHcCCCEE
Q 018443 77 AYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG-NT-GSNSTREAIHATEQGFAVGMHAA 154 (356)
Q Consensus 77 ~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~-gv-g~~st~~ai~lar~a~~~Gadav 154 (356)
.+...++.+.+.|.+||=+.+..- ...++.++..++.+.+.+ . .+.+.. +. ...+.+...+.++.|+++|+..+
T Consensus 31 ~~~~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~~~~~~~l~~-~--gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v 106 (257)
T 3lmz_A 31 DLDTTLKTLERLDIHYLCIKDFHL-PLNSTDEQIRAFHDKCAA-H--KVTGYAVGPIYMKSEEEIDRAFDYAKRVGVKLI 106 (257)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTTS-CTTCCHHHHHHHHHHHHH-T--TCEEEEEEEEEECSHHHHHHHHHHHHHHTCSEE
T ss_pred CHHHHHHHHHHhCCCEEEEecccC-CCCCCHHHHHHHHHHHHH-c--CCeEEEEeccccCCHHHHHHHHHHHHHhCCCEE
Confidence 467778888899999997765421 234577776666654443 3 344332 22 22467888888999999999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeC-CCCCCCCCCHHHHHHHhc--CCCEE
Q 018443 155 LHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNV-PSRTGQDIPPRVIHTMAQ--SPNLA 210 (356)
Q Consensus 155 lv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~-P~~tG~~ls~~~l~~La~--~pniv 210 (356)
.+.|. .+ ..+...++++. +.+.+-|. |..+ .--+++.+.++.+ .||+.
T Consensus 107 ~~~p~------~~-~l~~l~~~a~~~gv~l~lEn~~~~~~-~~~~~~~~~~ll~~~~p~vg 159 (257)
T 3lmz_A 107 VGVPN------YE-LLPYVDKKVKEYDFHYAIHLHGPDIK-TYPDATDVWVHTKDLDPRIG 159 (257)
T ss_dssp EEEEC------GG-GHHHHHHHHHHHTCEEEEECCCTTCS-SSCSHHHHHHHHTTSCTTEE
T ss_pred EecCC------HH-HHHHHHHHHHHcCCEEEEecCCCccc-ccCCHHHHHHHHHhCCCCcc
Confidence 87543 12 22333333443 56778887 4322 2236777777774 47653
No 275
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=81.74 E-value=3.6 Score=36.40 Aligned_cols=104 Identities=15% Similarity=0.163 Sum_probs=60.2
Q ss_pred HHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 159 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP 159 (356)
..++..++.|++++...++. ..+++...+ -.++++.|+. +..| +..|.+.|+|.+.+.|
T Consensus 79 d~~~~A~~aGAd~v~~p~~d-----------~~v~~~~~~---~g~~~i~G~~--t~~e----~~~A~~~Gad~v~~Fp- 137 (214)
T 1wbh_A 79 QQLAEVTEAGAQFAISPGLT-----------EPLLKAATE---GTIPLIPGIS--TVSE----LMLGMDYGLKEFKFFP- 137 (214)
T ss_dssp HHHHHHHHHTCSCEEESSCC-----------HHHHHHHHH---SSSCEEEEES--SHHH----HHHHHHTTCCEEEETT-
T ss_pred HHHHHHHHcCCCEEEcCCCC-----------HHHHHHHHH---hCCCEEEecC--CHHH----HHHHHHCCCCEEEEec-
Confidence 45677778899999755432 234444433 2467888854 3444 4667889999999833
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEeCCC-CCCCCCCHHHHHHHhcCCCEEEEe
Q 018443 160 YYGKTSLEGLISHFDSVLSMGPTIIYNVPS-RTGQDIPPRVIHTMAQSPNLAGVK 213 (356)
Q Consensus 160 ~y~~~s~~~l~~y~~~va~~~PiilYn~P~-~tG~~ls~~~l~~La~~pnivGiK 213 (356)
...-+-.+|++++....| +.|- .+| .++++.+.++.+.+++.|+=
T Consensus 138 ----a~~~gG~~~lk~i~~~~~----~ipvvaiG-GI~~~n~~~~l~agg~~~v~ 183 (214)
T 1wbh_A 138 ----AEANGGVKALQAIAGPFS----QVRFCPTG-GISPANYRDYLALKSVLCIG 183 (214)
T ss_dssp ----TTTTTHHHHHHHHHTTCT----TCEEEEBS-SCCTTTHHHHHTSTTBSCEE
T ss_pred ----CccccCHHHHHHHhhhCC----CCeEEEEC-CCCHHHHHHHHhcCCCeEEE
Confidence 111111567777766543 1111 133 35666777777665555543
No 276
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=81.70 E-value=6.9 Score=35.59 Aligned_cols=91 Identities=12% Similarity=0.103 Sum_probs=59.1
Q ss_pred HHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhC--CCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEc
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFG--ASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~--grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~ 157 (356)
..++.+.+. ++.+++.+-+-|+..--. -.++++.+.+.+. +++|||++=|-.+.++..++.+.. .|++++++-
T Consensus 162 e~a~~~~~~-a~~il~t~i~~dG~~~G~--d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~--~G~~gvivg 236 (260)
T 2agk_A 162 DTFRELRKY-TNEFLIHAADVEGLCGGI--DELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELS--HGKVDLTFG 236 (260)
T ss_dssp HHHHHHTTT-CSEEEEEC-------CCC--CHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHH--TTCEEEECC
T ss_pred HHHHHHHHh-cCEEEEEeeccccCcCCC--CHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhc--CCCCEEEee
Confidence 566666777 899998775544332111 2345555666653 268999987777788877766542 299999999
Q ss_pred CC---CCCC-CCHHHHHHHHHH
Q 018443 158 NP---YYGK-TSLEGLISHFDS 175 (356)
Q Consensus 158 pP---~y~~-~s~~~l~~y~~~ 175 (356)
.- |+.+ .+-+++.+|.++
T Consensus 237 ~al~l~~g~~~~~~~~~~~~~~ 258 (260)
T 2agk_A 237 SSLDIFGGNLVKFEDCCRWNEK 258 (260)
T ss_dssp TTBGGGTCSSBCHHHHHHHHHH
T ss_pred CCHHHcCCCCCCHHHHHHHHHh
Confidence 88 4566 788888888653
No 277
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=81.64 E-value=6.8 Score=36.06 Aligned_cols=123 Identities=18% Similarity=0.221 Sum_probs=67.3
Q ss_pred ccCceeEeeecccCCCCC-CCHHHHHHHHHHHHHCCCCEEEEcc-Cccc-ccCCC-HHHHHHHHHHHHHHhCCCcEEEEe
Q 018443 55 KALRLITAIKTPYLPDGR-FDLEAYDDLVNMQIVNGAEGMIVGG-TTGE-GQLMS-WDEHIMLIGHTVNCFGASVKVIGN 130 (356)
Q Consensus 55 ~~~Gvi~al~TPf~~dg~-ID~~~l~~~v~~li~~Gv~Gl~v~G-stGE-~~~Lt-~eEr~~li~~~~~~~~grvpVi~g 130 (356)
+..||+-.-+=-|.+.|+ .|.+..-++++.+++.|++-|=++| ||-= ....| .||..+++-.+-...+.++|+-+=
T Consensus 8 ~iMGIlNvTPDSFsDGG~~~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~~~v~iSID 87 (270)
T 4hb7_A 8 KIMGILNVTPDSFSDGGKFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGFDVKISVD 87 (270)
T ss_dssp EEEEEEECC----------CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTSSSEEEEE
T ss_pred eEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhcCCCeEEEE
Confidence 457777654444887776 5788889999999999999998877 3322 22345 556666665443333335554443
Q ss_pred cCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCC
Q 018443 131 TGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPS 189 (356)
Q Consensus 131 vg~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~P~ 189 (356)
+.. . +-++.|-++||+-| +=......+++ .++.+++. +|+++-+.+.
T Consensus 88 T~~--~----~Va~~al~aGa~iI---NDVs~g~~d~~---m~~~va~~~~~~vlMH~~~ 135 (270)
T 4hb7_A 88 TFR--S----EVAEACLKLGVDMI---NDQWAGLYDHR---MFQIVAKYDAEIILMHNGN 135 (270)
T ss_dssp CSC--H----HHHHHHHHHTCCEE---EETTTTSSCTH---HHHHHHHTTCEEEEECCCS
T ss_pred CCC--H----HHHHHHHHhcccee---ccccccccchh---HHHHHHHcCCCeEEecccc
Confidence 332 2 34566777898744 22222112222 23455555 7888887654
No 278
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=81.63 E-value=22 Score=31.84 Aligned_cols=97 Identities=14% Similarity=0.005 Sum_probs=58.1
Q ss_pred eeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCC---CcEEEEecCCCC
Q 018443 59 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA---SVKVIGNTGSNS 135 (356)
Q Consensus 59 vi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~g---rvpVi~gvg~~s 135 (356)
+-...+|-| +.|.-..+....-++.-++.|++.|=+.-.-|.... +-.+-+..+++.+.+ -++||.-++-.+
T Consensus 72 v~v~tvigF-P~G~~~~~~k~~e~~~Av~~GAdEID~vinig~~~~----~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~ 146 (234)
T 1n7k_A 72 VKLCSVIGF-PLGQAPLEVKLVEAQTVLEAGATELDVVPHLSLGPE----AVYREVSGIVKLAKSYGAVVKVILEAPLWD 146 (234)
T ss_dssp CCEEEEEST-TTCCSCHHHHHHHHHHHHHHTCCEEEECCCGGGCHH----HHHHHHHHHHHHHHHTTCEEEEECCGGGSC
T ss_pred ceEEEEeCC-CCCCCcHHHHHHHHHHHHHcCCCEEEEeccchHHHH----HHHHHHHHHHHHHhhcCCeEEEEEeccCCC
Confidence 334444555 456666777778888888888888765555554333 222223333333321 233477776666
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCC
Q 018443 136 TREAIHATEQGFAVGMHAALHINPY 160 (356)
Q Consensus 136 t~~ai~lar~a~~~Gadavlv~pP~ 160 (356)
.++-...+|.+.++|||.|=...-|
T Consensus 147 ~e~i~~a~ria~eaGADfVKTsTG~ 171 (234)
T 1n7k_A 147 DKTLSLLVDSSRRAGADIVKTSTGV 171 (234)
T ss_dssp HHHHHHHHHHHHHTTCSEEESCCSS
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCCC
Confidence 7777777788888888877655433
No 279
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=81.47 E-value=4.7 Score=35.73 Aligned_cols=71 Identities=14% Similarity=-0.010 Sum_probs=48.7
Q ss_pred HHHHHHHHHHCCCCEEEEccCcccc-cCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEE
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEG-QLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALH 156 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~-~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv 156 (356)
..+.++.+.+.|++.+.+..-.|.+ ...+. ++++.+.+.+ ++|++++-+=.+.++ ++.+.++|||+|.+
T Consensus 34 ~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~----~~i~~i~~~~--~ipv~v~ggI~~~~~----~~~~l~~Gad~V~l 103 (244)
T 1vzw_A 34 PLEAALAWQRSGAEWLHLVDLDAAFGTGDNR----ALIAEVAQAM--DIKVELSGGIRDDDT----LAAALATGCTRVNL 103 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH----HHHHHHHHHC--SSEEEEESSCCSHHH----HHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEecCchhhcCCChH----HHHHHHHHhc--CCcEEEECCcCCHHH----HHHHHHcCCCEEEE
Confidence 4455677888999999887655544 23333 4555555554 689999866655443 56666789999998
Q ss_pred cC
Q 018443 157 IN 158 (356)
Q Consensus 157 ~p 158 (356)
..
T Consensus 104 g~ 105 (244)
T 1vzw_A 104 GT 105 (244)
T ss_dssp CH
T ss_pred Cc
Confidence 64
No 280
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=81.33 E-value=2.6 Score=36.52 Aligned_cols=89 Identities=13% Similarity=0.055 Sum_probs=53.9
Q ss_pred HHHHHHHHHCCCCEEEE-ccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEc
Q 018443 79 DDLVNMQIVNGAEGMIV-GGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v-~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~ 157 (356)
...++...+.|++.+.+ .|.+|....-+. .+.++.+.+.. +++|++++-|= +. +.++.+.++|||++++.
T Consensus 117 ~~~~~~~~~~g~d~i~v~~g~~g~~~~~~~---~~~i~~l~~~~-~~~~i~~~gGI-~~----~~~~~~~~~Gad~vvvG 187 (211)
T 3f4w_A 117 PARVRLLEEAGADMLAVHTGTDQQAAGRKP---IDDLITMLKVR-RKARIAVAGGI-SS----QTVKDYALLGPDVVIVG 187 (211)
T ss_dssp HHHHHHHHHHTCCEEEEECCHHHHHTTCCS---HHHHHHHHHHC-SSCEEEEESSC-CT----TTHHHHHTTCCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEcCCCcccccCCCC---HHHHHHHHHHc-CCCcEEEECCC-CH----HHHHHHHHcCCCEEEEC
Confidence 34566777889998866 344444322121 23444444544 36788775433 22 34556678899999999
Q ss_pred CCCCCCCCHHHHHHHHHHH
Q 018443 158 NPYYGKTSLEGLISHFDSV 176 (356)
Q Consensus 158 pP~y~~~s~~~l~~y~~~v 176 (356)
...+...+..+..+-+++.
T Consensus 188 sai~~~~d~~~~~~~l~~~ 206 (211)
T 3f4w_A 188 SAITHAADPAGEARKISQV 206 (211)
T ss_dssp HHHHTCSSHHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHH
Confidence 8877766766655555543
No 281
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=81.29 E-value=1.2 Score=43.12 Aligned_cols=90 Identities=19% Similarity=0.233 Sum_probs=53.6
Q ss_pred HHHHHHHHCCCCEEEEccCcccc--cCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEc
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGEG--QLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE~--~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~ 157 (356)
..++.+.+.|+++|.+.+..|-. ...+ -.+.+..+.+.++ .|||+.=|=.+..++.+.. .+|||+|++-
T Consensus 237 e~a~~a~~aGad~I~vs~~gg~~~d~~~~---~~~~l~~v~~~~~--~pVia~GGI~~~~dv~kal----~~GAdaV~iG 307 (380)
T 1p4c_A 237 EDADRCIAEGADGVILSNHGGRQLDCAIS---PMEVLAQSVAKTG--KPVLIDSGFRRGSDIVKAL----ALGAEAVLLG 307 (380)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSCTTCCC---GGGTHHHHHHHHC--SCEEECSSCCSHHHHHHHH----HTTCSCEEES
T ss_pred HHHHHHHHcCCCEEEEcCCCCCcCCCCcC---HHHHHHHHHHHcC--CeEEEECCCCCHHHHHHHH----HhCCcHhheh
Confidence 35777889999999996554421 1111 1334445555554 3888654444566665544 4799999999
Q ss_pred CCCCCCC---CHHHHHHHHHHHHh
Q 018443 158 NPYYGKT---SLEGLISHFDSVLS 178 (356)
Q Consensus 158 pP~y~~~---s~~~l~~y~~~va~ 178 (356)
.|+++.. .++++.++.+.+.+
T Consensus 308 r~~l~~~~~~g~~~v~~~~~~l~~ 331 (380)
T 1p4c_A 308 RATLYGLAARGETGVDEVLTLLKA 331 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHH
Confidence 9876532 23444444444433
No 282
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=81.17 E-value=3.3 Score=37.19 Aligned_cols=89 Identities=15% Similarity=0.186 Sum_probs=50.8
Q ss_pred HHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEc
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~ 157 (356)
....++.+.+.|++.|.+..-.+.+.... .-.++++.+.+.+ .+||+++-+-++.++ ++.+.+.|||++++.
T Consensus 32 ~~~~a~~~~~~Ga~~i~v~d~~~~~~~~g--~~~~~i~~i~~~~--~iPvi~~ggi~~~~~----i~~~~~~Gad~v~lg 103 (266)
T 2w6r_A 32 LRDWVVEVEKRGAGEILLTSIDRDGTKSG--YDTEMIRFVRPLT--TLPIIASGGAGKMEH----FLEAFLAGADKALAA 103 (266)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTTSSCSSC--CCHHHHHHHGGGC--CSCEEEESCCCSTHH----HHHHHHHTCSEEECC
T ss_pred HHHHHHHHHHCCCCEEEEEecCcccCCCc--ccHHHHHHHHHhc--CCCEEEECCCCCHHH----HHHHHHcCCcHhhhh
Confidence 45667777889999999865332211110 1134444444433 689999866555444 344556899999998
Q ss_pred CCCC-CCCCHHHHHHHHH
Q 018443 158 NPYY-GKTSLEGLISHFD 174 (356)
Q Consensus 158 pP~y-~~~s~~~l~~y~~ 174 (356)
...+ ...+.+.+.+..+
T Consensus 104 ~~~~~~~~~~~~~~~~~~ 121 (266)
T 2w6r_A 104 SVFHFREIDMRELKEYLK 121 (266)
T ss_dssp CCC------CHHHHHHCC
T ss_pred HHHHhCCCCHHHHHHHHH
Confidence 7766 3223344444433
No 283
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=81.12 E-value=18 Score=33.62 Aligned_cols=74 Identities=14% Similarity=0.000 Sum_probs=41.4
Q ss_pred HHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHh-CCCcEEEEecCC-----CCHHHHHHHHHHHHHcCCCEE
Q 018443 81 LVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCF-GASVKVIGNTGS-----NSTREAIHATEQGFAVGMHAA 154 (356)
Q Consensus 81 ~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~-~grvpVi~gvg~-----~st~~ai~lar~a~~~Gadav 154 (356)
-++..++.|++++-+-...| +=...+..+-+..+++.+ ...+|+|+-..- .+.+-....++.|.++|||.|
T Consensus 130 ~ve~Av~~GAdaV~~~i~~G---s~~~~~~l~~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~V 206 (295)
T 3glc_A 130 SMDDAVRLNSCAVAAQVYIG---SEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQII 206 (295)
T ss_dssp CHHHHHHTTCSEEEEEECTT---STTHHHHHHHHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHCCCCEEEEEEECC---CCcHHHHHHHHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEE
Confidence 35556678888877665555 223444444444445443 335777762211 233323447778888888876
Q ss_pred EEc
Q 018443 155 LHI 157 (356)
Q Consensus 155 lv~ 157 (356)
=..
T Consensus 207 Kt~ 209 (295)
T 3glc_A 207 KTY 209 (295)
T ss_dssp EEE
T ss_pred EeC
Confidence 654
No 284
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=81.08 E-value=9.3 Score=37.90 Aligned_cols=100 Identities=11% Similarity=0.125 Sum_probs=78.9
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHc
Q 018443 70 DGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAV 149 (356)
Q Consensus 70 dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~ 149 (356)
.-.-|.+-+.+.++.+.+.|++-|.++-|+|= +++.+-.++++.+.+.+ ++|+=+++ +++.--++.-+-.|.++
T Consensus 152 ~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~---~~P~~v~~lv~~l~~~~--~~~i~~H~-Hnd~GlAvAN~laAv~A 225 (464)
T 2nx9_A 152 SPVHNLQTWVDVAQQLAELGVDSIALKDMAGI---LTPYAAEELVSTLKKQV--DVELHLHC-HSTAGLADMTLLKAIEA 225 (464)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCSEEEEEETTSC---CCHHHHHHHHHHHHHHC--CSCEEEEE-CCTTSCHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEcCCCCC---cCHHHHHHHHHHHHHhc--CCeEEEEE-CCCCChHHHHHHHHHHh
Confidence 34569999999999999999999999989986 68999999999999887 46766555 56777888999999999
Q ss_pred CCCEEEEc-CCCC---CCCCHHHHHHHHHH
Q 018443 150 GMHAALHI-NPYY---GKTSLEGLISHFDS 175 (356)
Q Consensus 150 Gadavlv~-pP~y---~~~s~~~l~~y~~~ 175 (356)
||+.|=.. .|+- +.++-++++..++.
T Consensus 226 Ga~~VD~ti~g~gertGN~~lE~lv~~L~~ 255 (464)
T 2nx9_A 226 GVDRVDTAISSMSGTYGHPATESLVATLQG 255 (464)
T ss_dssp TCSEEEEBCGGGCSTTSCCBHHHHHHHHTT
T ss_pred CCCEEEEeccccCCCCcCHHHHHHHHHHHh
Confidence 99998654 3433 33555666666543
No 285
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=81.03 E-value=6.6 Score=35.31 Aligned_cols=100 Identities=16% Similarity=0.212 Sum_probs=64.4
Q ss_pred HHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN 158 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~p 158 (356)
.+.++..+++|++.++..+. + .++++.+.+. .+|++.|+.+ . .-+..|.++|+|.+-+.|
T Consensus 96 ~~~a~~Ai~AGA~fIvsP~~-------~----~~vi~~~~~~---gi~~ipGv~T--p----tEi~~A~~~Gad~vK~FP 155 (232)
T 4e38_A 96 GEQALAAKEAGATFVVSPGF-------N----PNTVRACQEI---GIDIVPGVNN--P----STVEAALEMGLTTLKFFP 155 (232)
T ss_dssp HHHHHHHHHHTCSEEECSSC-------C----HHHHHHHHHH---TCEEECEECS--H----HHHHHHHHTTCCEEEECS
T ss_pred HHHHHHHHHcCCCEEEeCCC-------C----HHHHHHHHHc---CCCEEcCCCC--H----HHHHHHHHcCCCEEEECc
Confidence 45677788899999975542 2 2455555443 6899999872 3 345667899999998843
Q ss_pred CCCCCCCHHHHHHHHHHHHhcC---CeEEEeCCCCCCCCCCHHHHHHHhcCCCEE
Q 018443 159 PYYGKTSLEGLISHFDSVLSMG---PTIIYNVPSRTGQDIPPRVIHTMAQSPNLA 210 (356)
Q Consensus 159 P~y~~~s~~~l~~y~~~va~~~---PiilYn~P~~tG~~ls~~~l~~La~~pniv 210 (356)
. +.-+=.+|.+++.... |++ | +| .++++.+.+..+.+++.
T Consensus 156 -a----~~~gG~~~lkal~~p~p~ip~~----p--tG-GI~~~n~~~~l~aGa~~ 198 (232)
T 4e38_A 156 -A----EASGGISMVKSLVGPYGDIRLM----P--TG-GITPSNIDNYLAIPQVL 198 (232)
T ss_dssp -T----TTTTHHHHHHHHHTTCTTCEEE----E--BS-SCCTTTHHHHHTSTTBC
T ss_pred -C----ccccCHHHHHHHHHHhcCCCee----e--Ec-CCCHHHHHHHHHCCCeE
Confidence 2 1111248888887754 343 2 33 35677788877766543
No 286
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=81.02 E-value=29 Score=30.70 Aligned_cols=104 Identities=12% Similarity=0.041 Sum_probs=69.5
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHc--CC
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAV--GM 151 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~--Ga 151 (356)
|+++.+..+++|++.|..-|.+.+.... . +..+|.+-+..+.+..+-......-.+..+.+++.+.++...+. ..
T Consensus 110 ~~~~~~~a~~~L~~~G~~~I~~i~~~~~--~-~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 186 (289)
T 3k9c_A 110 DVAGITLAVDHLTELGHRNIAHIDGADA--P-GGADRRAGFLAAMDRHGLSASATVVTGGTTETEGAEGMHTLLEMPTPP 186 (289)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEECCTTS--T-THHHHHHHHHHHHHHTTCGGGEEEECCCSSHHHHHHHHHHHHTSSSCC
T ss_pred hHHHHHHHHHHHHHCCCCcEEEEeCCCC--c-cHHHHHHHHHHHHHHCCCCCCccEEECCCCHHHHHHHHHHHHcCCCCC
Confidence 5667788899999999877765554432 2 78999998888888765443222234566788888887777653 47
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc---CC----eEEEeC
Q 018443 152 HAALHINPYYGKTSLEGLISHFDSVLSM---GP----TIIYNV 187 (356)
Q Consensus 152 davlv~pP~y~~~s~~~l~~y~~~va~~---~P----iilYn~ 187 (356)
||++.. ++.-...-++++.+. .| |+=||.
T Consensus 187 ~ai~~~-------~d~~A~g~~~al~~~g~~vP~di~vig~D~ 222 (289)
T 3k9c_A 187 TAVVAF-------NDRCATGVLDLLVRSGRDVPADISVVGYDD 222 (289)
T ss_dssp SEEEES-------SHHHHHHHHHHHHHTTCCTTTTCEEEEEEC
T ss_pred CEEEEC-------ChHHHHHHHHHHHHcCCCCCCceEEEEECC
Confidence 888775 455445555666554 34 677764
No 287
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=80.95 E-value=12 Score=37.54 Aligned_cols=74 Identities=15% Similarity=0.160 Sum_probs=50.3
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccc-----------------------------c------------cCCCHHHHH
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGE-----------------------------G------------QLMSWDEHI 111 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE-----------------------------~------------~~Lt~eEr~ 111 (356)
-|.+.+++++++..+.|+++|++.-.+.- + ..+++
T Consensus 257 ~d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~~~~---- 332 (511)
T 1kbi_A 257 SDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTW---- 332 (511)
T ss_dssp SSHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCCH----
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhccChHhHH----
Confidence 35677889999998999998765433111 0 12333
Q ss_pred HHHHHHHHHhCCCcEEEE-ecCCCCHHHHHHHHHHHHHcCCCEEEEcC
Q 018443 112 MLIGHTVNCFGASVKVIG-NTGSNSTREAIHATEQGFAVGMHAALHIN 158 (356)
Q Consensus 112 ~li~~~~~~~~grvpVi~-gvg~~st~~ai~lar~a~~~Gadavlv~p 158 (356)
+.++.+.+.+ ++||++ |+++ .+.++.++++|+|+|.+..
T Consensus 333 ~~i~~lr~~~--~~PvivKgv~~------~e~A~~a~~aGad~I~vs~ 372 (511)
T 1kbi_A 333 KDIEELKKKT--KLPIVIKGVQR------TEDVIKAAEIGVSGVVLSN 372 (511)
T ss_dssp HHHHHHHHHC--SSCEEEEEECS------HHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHh--CCcEEEEeCCC------HHHHHHHHHcCCCEEEEcC
Confidence 3366666655 578887 5553 4668899999999999954
No 288
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=80.92 E-value=5.5 Score=41.75 Aligned_cols=100 Identities=14% Similarity=0.185 Sum_probs=79.5
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcC
Q 018443 71 GRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVG 150 (356)
Q Consensus 71 g~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~G 150 (356)
+..|.+-+.++++.+++.|++-|.++-|.| .+++++-.++++.+.+.++ ++|+=+++ +++.--++.-+-.|.++|
T Consensus 256 ~~~~~e~~~~~a~~l~~~Ga~~I~l~DT~G---~~~P~~v~~lV~~lk~~~p-~~~I~~H~-Hnd~GlAvANslaAveAG 330 (718)
T 3bg3_A 256 TKYSLQYYMGLAEELVRAGTHILCIKDMAG---LLKPTACTMLVSSLRDRFP-DLPLHIHT-HDTSGAGVAAMLACAQAG 330 (718)
T ss_dssp CTTCHHHHHHHHHHHHHHTCSEEEEECTTS---CCCHHHHHHHHHHHHHHST-TCCEEEEC-CCTTSCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEcCcCC---CcCHHHHHHHHHHHHHhCC-CCeEEEEE-CCCccHHHHHHHHHHHhC
Confidence 357999999999999999999999999999 5789999999999998875 56765555 567788889999999999
Q ss_pred CCEEEEcCCCC----CCCCHHHHHHHHHH
Q 018443 151 MHAALHINPYY----GKTSLEGLISHFDS 175 (356)
Q Consensus 151 adavlv~pP~y----~~~s~~~l~~y~~~ 175 (356)
||.|=..---+ +.++-++++..++.
T Consensus 331 a~~VD~ti~GlGertGN~~lE~vv~~L~~ 359 (718)
T 3bg3_A 331 ADVVDVAADSMSGMTSQPSMGALVACTRG 359 (718)
T ss_dssp CSEEEEBCGGGCSTTSCCBHHHHHHHHTT
T ss_pred CCEEEecCcccccccCchhHHHHHHHHHh
Confidence 99997654322 33555666665543
No 289
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=80.89 E-value=28 Score=30.42 Aligned_cols=95 Identities=9% Similarity=-0.040 Sum_probs=61.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcC--C
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVG--M 151 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~G--a 151 (356)
++++-+..+++|++.|..-+.+.+..... ..+|.+-+..+.+..+-......-.+..+.+++.+.++...+.+ .
T Consensus 102 ~~~~g~~a~~~L~~~G~~~i~~i~~~~~~----~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 177 (280)
T 3gyb_A 102 DFRGAEIATKHLIDLGHTHIAHLRVGSGA----GLRRFESFEATMRAHGLEPLSNDYLGPAVEHAGYTETLALLKEHPEV 177 (280)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEECCSSHH----HHHHHHHHHHHHHHTTCCCEECCCCSCCCHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHHHHHHHHHCCCCeEEEEeCCCch----HHHHHHHHHHHHHHcCcCCCcccccCCCCHHHHHHHHHHHHhCCCCC
Confidence 46677888899999998777665554443 78888888877776654433222345567777777777766554 7
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc
Q 018443 152 HAALHINPYYGKTSLEGLISHFDSVLSM 179 (356)
Q Consensus 152 davlv~pP~y~~~s~~~l~~y~~~va~~ 179 (356)
|+++.. ++.....-++++.+.
T Consensus 178 ~ai~~~-------~d~~a~g~~~al~~~ 198 (280)
T 3gyb_A 178 TAIFSS-------NDITAIGALGAAREL 198 (280)
T ss_dssp CEEEES-------SHHHHHHHHHHHHHH
T ss_pred CEEEEC-------ChHHHHHHHHHHHHc
Confidence 888765 444444445555443
No 290
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=80.79 E-value=8.8 Score=33.99 Aligned_cols=18 Identities=17% Similarity=0.436 Sum_probs=11.0
Q ss_pred HHHHHHHHHCCCCEEEEc
Q 018443 79 DDLVNMQIVNGAEGMIVG 96 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~ 96 (356)
.+.++.+++.|++++++.
T Consensus 98 ~~~~~~~~~~Gad~v~~~ 115 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVV 115 (248)
T ss_dssp HHHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHHCCCCEEEEC
Confidence 455666666666666653
No 291
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=80.70 E-value=3.9 Score=37.97 Aligned_cols=131 Identities=15% Similarity=0.195 Sum_probs=76.6
Q ss_pred eeecccCCCCCCCHHH-----------HHHHHHHHHHCCCCEEEEccCccc----------------------ccCC-CH
Q 018443 62 AIKTPYLPDGRFDLEA-----------YDDLVNMQIVNGAEGMIVGGTTGE----------------------GQLM-SW 107 (356)
Q Consensus 62 al~TPf~~dg~ID~~~-----------l~~~v~~li~~Gv~Gl~v~GstGE----------------------~~~L-t~ 107 (356)
-.+||-+....||... +..-++ -++.|++=| +|||| -..| |.
T Consensus 98 evltpad~~~~I~k~~f~vpfv~~~~~l~EAlr-ri~eGA~mI---rTtge~gtg~v~~av~h~r~~~~~i~~l~g~~t~ 173 (291)
T 3o07_A 98 EVLTPADWTHHIEKDKFKVPFVCGAKDLGEALR-RINEGAAMI---RTKGEAGTGDVSEAVKHIRRITEEIKACQQLKSE 173 (291)
T ss_dssp TTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHH-HHHHTCSEE---EECCCTTSCCTHHHHHHHHHHHHHHHHHHTCCCH
T ss_pred cCCCHHHHHHHhhhhcCCCcEEeeCCCHHHHHH-HHHCCCCEE---EecCcCCCccHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 3456665555555532 223333 346788855 88888 4456 77
Q ss_pred HHH----------HHHHHHHHHHhCCCcEEEE-ecCCC-CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHH
Q 018443 108 DEH----------IMLIGHTVNCFGASVKVIG-NTGSN-STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDS 175 (356)
Q Consensus 108 eEr----------~~li~~~~~~~~grvpVi~-gvg~~-st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~ 175 (356)
+|. .++++.+.+. .++||++ +-|.- +.+++.+. .+.|+|+||+..-.+...++....+.|.+
T Consensus 174 ~el~~~a~~~~ad~elI~~Ike~--~~IPVV~IAnGGI~TpedA~~~----le~GaDGVmVGrAI~~s~DP~~~Akafv~ 247 (291)
T 3o07_A 174 DDIAKVAEEMRVPVSLLKDVLEK--GKLPVVNFAAGGVATPADAALL----MQLGCDGVFVGSGIFKSSNPVRLATAVVE 247 (291)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHH--TSCSSCEEBCSSCCSHHHHHHH----HHTTCSCEEECGGGGGSSCHHHHHHHHHH
T ss_pred HHhhhcccccCCCHHHHHHHHHc--cCCCEEEecCCCCCCHHHHHHH----HHhCCCEEEEchHHhCCCCHHHHHHHHHH
Confidence 763 1455555554 4789863 44555 44444433 36899999999877777888888877777
Q ss_pred HHhcCCeEEEeCCCCCCCCCCHHHHHHHhc-C-CCEEEEeecC
Q 018443 176 VLSMGPTIIYNVPSRTGQDIPPRVIHTMAQ-S-PNLAGVKECV 216 (356)
Q Consensus 176 va~~~PiilYn~P~~tG~~ls~~~l~~La~-~-pnivGiK~s~ 216 (356)
..+. | -.|+.+.++++ + .-.+|+-.++
T Consensus 248 Av~~-----~---------~~~~~~~~~s~~l~~~m~g~~~~~ 276 (291)
T 3o07_A 248 ATTH-----F---------DNPSKLLEVSSDLGELMGGVSIES 276 (291)
T ss_dssp HHHT-----T---------TCHHHHHHHHSSCCCC--------
T ss_pred HHHh-----c---------cCHHHHHHHHhcccccccCcchhh
Confidence 6654 1 34677888874 3 3456665443
No 292
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=80.64 E-value=28 Score=30.99 Aligned_cols=121 Identities=11% Similarity=-0.003 Sum_probs=72.0
Q ss_pred HHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEe-c-----------------CCC-------
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGN-T-----------------GSN------- 134 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~g-v-----------------g~~------- 134 (356)
..++.+.+.|.+||=+...... .++.++..++.+.+. .. .+.+.+. + ++.
T Consensus 25 ~~l~~~~~~G~~~vEl~~~~~~--~~~~~~~~~~~~~l~-~~--gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~ 99 (290)
T 3tva_A 25 VHLEVAQDLKVPTVQVHAPHPH--TRTREHAQAFRAKCD-AA--GIQVTVIFGGFDGESYADIPTTARTVGLVPLETRAS 99 (290)
T ss_dssp BCHHHHHHTTCSEEEEECCCGG--GCSHHHHHHHHHHHH-HT--TCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHH
T ss_pred HHHHHHHHcCCCEEEecCCCCC--cCCHHHHHHHHHHHH-Hc--CCEEEEEeeccCCcccccccccccccCCCCHHHHHH
Confidence 4677788899999976653332 367666666655444 33 3444332 2 111
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCC---HHHHHHHHHHHHhc-----CCeEEEeCCCCCCCCCCHHHHHHHhc-
Q 018443 135 STREAIHATEQGFAVGMHAALHINPYYGKTS---LEGLISHFDSVLSM-----GPTIIYNVPSRTGQDIPPRVIHTMAQ- 205 (356)
Q Consensus 135 st~~ai~lar~a~~~Gadavlv~pP~y~~~s---~~~l~~y~~~va~~-----~PiilYn~P~~tG~~ls~~~l~~La~- 205 (356)
+.+...+.++.|+++|+..+.+.+.+....+ .+.+.+.++.+++. +.+.+-|.+ -+++.+.+|.+
T Consensus 100 ~~~~~~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~------~~~~~~~~l~~~ 173 (290)
T 3tva_A 100 RVAEMKEISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHLETGQ------ESADHLLEFIED 173 (290)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEECCS------SCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEEecCC------CCHHHHHHHHHh
Confidence 1344566777888999999998765432212 34566667777653 356666654 25677777763
Q ss_pred --CCCEEE
Q 018443 206 --SPNLAG 211 (356)
Q Consensus 206 --~pnivG 211 (356)
.||+.-
T Consensus 174 ~~~~~~g~ 181 (290)
T 3tva_A 174 VNRPNLGI 181 (290)
T ss_dssp HCCTTEEE
T ss_pred cCCCCEEE
Confidence 467543
No 293
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=80.48 E-value=8.1 Score=34.46 Aligned_cols=103 Identities=14% Similarity=0.110 Sum_probs=60.6
Q ss_pred HHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 159 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP 159 (356)
+.++.+++.|++.+++.++...-+ ++-.++++.+.+. .+++++.+.+ .+.++.++++|+|.+.+..-
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~~~~p----~~l~~~i~~~~~~---g~~v~~~v~t------~eea~~a~~~Gad~Ig~~~~ 158 (232)
T 3igs_A 92 DDVDALAQAGAAIIAVDGTARQRP----VAVEALLARIHHH---HLLTMADCSS------VDDGLACQRLGADIIGTTMS 158 (232)
T ss_dssp HHHHHHHHHTCSEEEEECCSSCCS----SCHHHHHHHHHHT---TCEEEEECCS------HHHHHHHHHTTCSEEECTTT
T ss_pred HHHHHHHHcCCCEEEECccccCCH----HHHHHHHHHHHHC---CCEEEEeCCC------HHHHHHHHhCCCCEEEEcCc
Confidence 346667889999997766654322 3444555555442 5678877753 45678889999999965332
Q ss_pred CCC------CCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCC-CHHHHHHHhcC
Q 018443 160 YYG------KTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDI-PPRVIHTMAQS 206 (356)
Q Consensus 160 ~y~------~~s~~~l~~y~~~va~~-~PiilYn~P~~tG~~l-s~~~l~~La~~ 206 (356)
-|. .++ .+.++++.+. .|++-- | .+ +++.+.++.+.
T Consensus 159 g~t~~~~~~~~~----~~~i~~l~~~~ipvIA~------G-GI~t~~d~~~~~~~ 202 (232)
T 3igs_A 159 GYTTPDTPEEPD----LPLVKALHDAGCRVIAE------G-RYNSPALAAEAIRY 202 (232)
T ss_dssp TSSSSSCCSSCC----HHHHHHHHHTTCCEEEE------S-CCCSHHHHHHHHHT
T ss_pred cCCCCCCCCCCC----HHHHHHHHhcCCcEEEE------C-CCCCHHHHHHHHHc
Confidence 221 122 2344445443 455421 2 34 57777777654
No 294
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=80.23 E-value=2.1 Score=40.25 Aligned_cols=112 Identities=16% Similarity=0.213 Sum_probs=59.9
Q ss_pred HHHHHHHCCCCEEEEcc-----CcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEE
Q 018443 81 LVNMQIVNGAEGMIVGG-----TTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAAL 155 (356)
Q Consensus 81 ~v~~li~~Gv~Gl~v~G-----stGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavl 155 (356)
.++.+.+.|+|+|++-| .+|+. . -..++..+++.+ ++|||+.=|=.+.++..+.. ++|||+|+
T Consensus 136 ~a~~a~~~GaD~i~v~g~~~GG~~G~~---~---~~~ll~~i~~~~--~iPviaaGGI~~~~dv~~al----~~GA~gV~ 203 (326)
T 3bo9_A 136 LARMVERAGADAVIAEGMESGGHIGEV---T---TFVLVNKVSRSV--NIPVIAAGGIADGRGMAAAF----ALGAEAVQ 203 (326)
T ss_dssp HHHHHHHTTCSCEEEECTTSSEECCSS---C---HHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHH----HHTCSEEE
T ss_pred HHHHHHHcCCCEEEEECCCCCccCCCc---c---HHHHHHHHHHHc--CCCEEEECCCCCHHHHHHHH----HhCCCEEE
Confidence 45567789999999843 33532 2 234555555544 68988744433455544333 37999999
Q ss_pred EcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCC-CCCCCCCCHHHHHHHh
Q 018443 156 HINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVP-SRTGQDIPPRVIHTMA 204 (356)
Q Consensus 156 v~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P-~~tG~~ls~~~l~~La 204 (356)
+...++.......-..|-+.+.++ ..+++=..+ ++.+..+..+..+++.
T Consensus 204 vGs~~~~~~e~~~~~~~k~~~~~~~~~~~~~~~~~~G~p~R~l~n~~~~~~~ 255 (326)
T 3bo9_A 204 MGTRFVASVESDVHPVYKEKIVKASIRDTVVTGAKLGHPARVLRTPFARKIQ 255 (326)
T ss_dssp ESHHHHTBSSCCSCHHHHHHHHHCCTTCEEEECTTTTCCEEEECCHHHHHHH
T ss_pred echHHHcCccccccHHHHHHHHhcccccEEEecccCCCceEEEecHHHHHhh
Confidence 998876543211222333334344 234433322 2233345555555544
No 295
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=80.20 E-value=4.2 Score=36.31 Aligned_cols=101 Identities=17% Similarity=0.237 Sum_probs=58.9
Q ss_pred HHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 159 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP 159 (356)
..++..++.|++++...++. ..+++...+ -.++++.|+. +..| +..|.+.|+|.+.+. |
T Consensus 89 d~~~~A~~aGAd~v~~p~~d-----------~~v~~~~~~---~g~~~i~G~~--t~~e----~~~A~~~Gad~vk~F-P 147 (225)
T 1mxs_A 89 SMFAAVEAAGAQFVVTPGIT-----------EDILEAGVD---SEIPLLPGIS--TPSE----IMMGYALGYRRFKLF-P 147 (225)
T ss_dssp HHHHHHHHHTCSSEECSSCC-----------HHHHHHHHH---CSSCEECEEC--SHHH----HHHHHTTTCCEEEET-T
T ss_pred HHHHHHHHCCCCEEEeCCCC-----------HHHHHHHHH---hCCCEEEeeC--CHHH----HHHHHHCCCCEEEEc-c
Confidence 45677788899999754432 234444333 2367787854 3333 466788999999983 2
Q ss_pred CCCCCCHHHH--HHHHHHHHhcCCeEEEeCCC-CCCCCCCHHHHHHHhcCCCEEEE
Q 018443 160 YYGKTSLEGL--ISHFDSVLSMGPTIIYNVPS-RTGQDIPPRVIHTMAQSPNLAGV 212 (356)
Q Consensus 160 ~y~~~s~~~l--~~y~~~va~~~PiilYn~P~-~tG~~ls~~~l~~La~~pnivGi 212 (356)
.+.+ .+|++++....| +.|- .+| .++++.+.++.+.+++.|+
T Consensus 148 ------a~~~~G~~~lk~i~~~~~----~ipvvaiG-GI~~~N~~~~l~~~Ga~~v 192 (225)
T 1mxs_A 148 ------AEISGGVAAIKAFGGPFG----DIRFCPTG-GVNPANVRNYMALPNVMCV 192 (225)
T ss_dssp ------HHHHTHHHHHHHHHTTTT----TCEEEEBS-SCCTTTHHHHHHSTTBCCE
T ss_pred ------CccccCHHHHHHHHhhCC----CCeEEEEC-CCCHHHHHHHHhccCCEEE
Confidence 2222 677788776543 1111 133 3566667766665444433
No 296
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=80.10 E-value=42 Score=31.97 Aligned_cols=125 Identities=9% Similarity=0.032 Sum_probs=89.1
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHHHHHHHHHHcCC
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 151 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai~lar~a~~~Ga 151 (356)
-|.+.+.+.+....+.|.+++=+-.. . +.++=.+.++.+.+.++.++++.+-+ ++.+.++++++++..++.|+
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~vKik~g--~----~~~~~~e~v~avR~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i 217 (397)
T 2qde_A 144 GEPEAVAEEALAVLREGFHFVKLKAG--G----PLKADIAMVAEVRRAVGDDVDLFIDINGAWTYDQALTTIRALEKYNL 217 (397)
T ss_dssp SCHHHHHHHHHHHHHHTCSCEEEECC--S----CHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCC
T ss_pred CCHHHHHHHHHHHHHhhhhheeeccc--C----CHHHHHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHHhCCC
Confidence 36788888888888999998865332 1 45666778888888888888988765 45689999999999999998
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh--cCCCEEEEeecC
Q 018443 152 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA--QSPNLAGVKECV 216 (356)
Q Consensus 152 davlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La--~~pnivGiK~s~ 216 (356)
+.+ --|. ++. -.+.++++.+. .||+.=. .-.+++.++++. ..-+++-+|-+-
T Consensus 218 ~~i--EqP~--~~~---~~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~ 273 (397)
T 2qde_A 218 SKI--EQPL--PAW---DLDGMARLRGKVATPIYADE------SAQELHDLLAIINKGAADGLMIKTQK 273 (397)
T ss_dssp SCE--ECCS--CTT---CHHHHHHHHTTCSSCEEEST------TCCSHHHHHHHHHHTCCSEEEECHHH
T ss_pred CEE--ECCC--Chh---hHHHHHHHHhhCCCCEEEeC------CcCCHHHHHHHHHcCCCCEEEEeccc
Confidence 854 3442 111 25566777775 5666432 234678888877 357899999753
No 297
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=80.03 E-value=4 Score=38.39 Aligned_cols=71 Identities=23% Similarity=0.304 Sum_probs=44.3
Q ss_pred HHHHHHHCCCCEEEEccC-----cccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEE
Q 018443 81 LVNMQIVNGAEGMIVGGT-----TGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAAL 155 (356)
Q Consensus 81 ~v~~li~~Gv~Gl~v~Gs-----tGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavl 155 (356)
.++.+.+.|+|+|.+-|. +|+. -+ ..++..+.+.+ ++|||+.=|=.+.+++. .+.+.|||+|+
T Consensus 122 ~a~~~~~~GaD~i~v~g~~~GG~~g~~--~~----~~ll~~i~~~~--~iPViaaGGI~~~~~~~----~al~~GAdgV~ 189 (332)
T 2z6i_A 122 LAKRMEKIGADAVIAEGMEAGGHIGKL--TT----MTLVRQVATAI--SIPVIAAGGIADGEGAA----AGFMLGAEAVQ 189 (332)
T ss_dssp HHHHHHHTTCSCEEEECTTSSEECCSS--CH----HHHHHHHHHHC--SSCEEEESSCCSHHHHH----HHHHTTCSEEE
T ss_pred HHHHHHHcCCCEEEEECCCCCCCCCCc--cH----HHHHHHHHHhc--CCCEEEECCCCCHHHHH----HHHHcCCCEEE
Confidence 456677899999998543 3422 12 24555555554 68988754433344433 33447999999
Q ss_pred EcCCCCCC
Q 018443 156 HINPYYGK 163 (356)
Q Consensus 156 v~pP~y~~ 163 (356)
+..+++..
T Consensus 190 vGs~~l~~ 197 (332)
T 2z6i_A 190 VGTRFVVA 197 (332)
T ss_dssp ECHHHHTB
T ss_pred ecHHHhcC
Confidence 98876654
No 298
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=79.97 E-value=20 Score=36.16 Aligned_cols=98 Identities=9% Similarity=0.002 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec---CCCCHHHHHHHHHHHHHcCC
Q 018443 75 LEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT---GSNSTREAIHATEQGFAVGM 151 (356)
Q Consensus 75 ~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv---g~~st~~ai~lar~a~~~Ga 151 (356)
.+..++.++...++|++.+-+..++.+. +.-...++.+.+ .+..+-+.++. ...+.+..++.++.+.++|+
T Consensus 116 ddv~~~~ve~a~~aGvd~vrIf~s~sd~-----~ni~~~i~~ak~-~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Ga 189 (539)
T 1rqb_A 116 DEVVDRFVDKSAENGMDVFRVFDAMNDP-----RNMAHAMAAVKK-AGKHAQGTICYTISPVHTVEGYVKLAGQLLDMGA 189 (539)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECCTTCCT-----HHHHHHHHHHHH-TTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTC
T ss_pred ccccHHHHHHHHhCCCCEEEEEEehhHH-----HHHHHHHHHHHH-CCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCC
Confidence 3457888899999999999999999887 222333333332 22222223322 12368899999999999999
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc
Q 018443 152 HAALHINPYYGKTSLEGLISHFDSVLSM 179 (356)
Q Consensus 152 davlv~pP~y~~~s~~~l~~y~~~va~~ 179 (356)
|.+.+. =..+..++.++.+.++.+.+.
T Consensus 190 d~I~L~-DT~G~~~P~~v~~lv~~l~~~ 216 (539)
T 1rqb_A 190 DSIALK-DMAALLKPQPAYDIIKAIKDT 216 (539)
T ss_dssp SEEEEE-ETTCCCCHHHHHHHHHHHHHH
T ss_pred CEEEeC-CCCCCcCHHHHHHHHHHHHHh
Confidence 976654 345666788888888888765
No 299
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=79.84 E-value=2.8 Score=39.58 Aligned_cols=118 Identities=17% Similarity=0.181 Sum_probs=59.3
Q ss_pred ccCceeEeeecc--cCCCCC-CCHHHHHHHHHHHHHCCCCEEEEcc-CcccccCCC-HHHHHHHHHHHHHHhC--CCcEE
Q 018443 55 KALRLITAIKTP--YLPDGR-FDLEAYDDLVNMQIVNGAEGMIVGG-TTGEGQLMS-WDEHIMLIGHTVNCFG--ASVKV 127 (356)
Q Consensus 55 ~~~Gvi~al~TP--f~~dg~-ID~~~l~~~v~~li~~Gv~Gl~v~G-stGE~~~Lt-~eEr~~li~~~~~~~~--grvpV 127 (356)
+..||+-. || |.+.|+ .|.+...++++.+++.|++-|=|+| ||.-+...+ .||..+++..+..... .++||
T Consensus 43 ~vMGIlNv--TPDSFsdgg~~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpI 120 (318)
T 2vp8_A 43 LIMAIVNR--TPDSFYDKGATFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLI 120 (318)
T ss_dssp EEEEEEC----------------CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEE
T ss_pred EEEEEEeC--CCCcccCCCccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeE
Confidence 34555543 66 877775 5889999999999999999999988 442223455 5666666433322221 15666
Q ss_pred EEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018443 128 IGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNV 187 (356)
Q Consensus 128 i~gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~ 187 (356)
-+=+.. . +-++.|-++|+|-|--+.-. .++++ +.-+++. .|+++-+.
T Consensus 121 SIDT~~--~----~VaeaAl~aGa~iINDVsg~----~d~~m---~~vaa~~g~~vVlmh~ 168 (318)
T 2vp8_A 121 SVDTWR--A----QVAKAACAAGADLINDTWGG----VDPAM---PEVAAEFGAGLVCAHT 168 (318)
T ss_dssp EEECSC--H----HHHHHHHHHTCCEEEETTSS----SSTTH---HHHHHHHTCEEEEECC
T ss_pred EEeCCC--H----HHHHHHHHhCCCEEEECCCC----CchHH---HHHHHHhCCCEEEECC
Confidence 554433 2 23445555599855544321 12333 4445554 78888775
No 300
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=79.65 E-value=4.6 Score=39.35 Aligned_cols=78 Identities=21% Similarity=0.304 Sum_probs=43.7
Q ss_pred HHHHHHHHHCCCCEEEEccCcccccCCCHH-------HHHHHHHHHHHHhC-CCcEEEEecCCCCHHHHHHHHHHHHHcC
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWD-------EHIMLIGHTVNCFG-ASVKVIGNTGSNSTREAIHATEQGFAVG 150 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~e-------Er~~li~~~~~~~~-grvpVi~gvg~~st~~ai~lar~a~~~G 150 (356)
.+.++.+++.|+|+|.+..+.| ..-+.. -...++..+++.+. -++|||+.=|=.+.++. ..|.++|
T Consensus 195 ~e~A~~a~~aGAD~I~vG~g~G--s~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di----~kalalG 268 (400)
T 3ffs_A 195 EEATKELIENGADGIKVGIGPG--SICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDI----GKALAVG 268 (400)
T ss_dssp HHHHHHHHHTTCSEEEECC-----------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHH----HHHHTTT
T ss_pred HHHHHHHHHcCCCEEEEeCCCC--cCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHH----HHHHHcC
Confidence 3456778889999999832222 100100 12344555555543 37999983332234443 3455689
Q ss_pred CCEEEEcCCCCC
Q 018443 151 MHAALHINPYYG 162 (356)
Q Consensus 151 adavlv~pP~y~ 162 (356)
||+|++-..+..
T Consensus 269 Ad~V~vGt~f~~ 280 (400)
T 3ffs_A 269 ASSVMIGSILAG 280 (400)
T ss_dssp CSEEEECGGGTT
T ss_pred CCEEEEChHHhc
Confidence 999999876553
No 301
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=79.61 E-value=5.4 Score=35.59 Aligned_cols=171 Identities=12% Similarity=-0.007 Sum_probs=91.2
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccCcccc-cCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHc
Q 018443 71 GRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEG-QLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAV 149 (356)
Q Consensus 71 g~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~-~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~ 149 (356)
-..|+..+.+-++.+.+.|++-+.+==.-|-| +++|. -..+++...+..+.++|+-++.--++.++ +.+.+.++
T Consensus 12 l~~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~--G~~~v~~ir~~~~~~~~~dvhLmv~~p~~---~i~~~~~a 86 (228)
T 3ovp_A 12 LNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITF--GHPVVESLRKQLGQDPFFDMHMMVSKPEQ---WVKPMAVA 86 (228)
T ss_dssp TTSCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCB--CHHHHHHHHHHHCSSSCEEEEEECSCGGG---GHHHHHHH
T ss_pred eeCCchhHHHHHHHHHHcCCCEEEEEecCCCcCccccc--CHHHHHHHHHhhCCCCcEEEEEEeCCHHH---HHHHHHHc
Confidence 45788899999999999999876551112222 22331 22366666666534567776655455544 45667789
Q ss_pred CCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHhcC----------CCEEEEeecCch
Q 018443 150 GMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMAQS----------PNLAGVKECVGN 218 (356)
Q Consensus 150 Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~P~~tG~~ls~~~l~~La~~----------pnivGiK~s~~d 218 (356)
|||.+.+..=. . +.+.+..+.+-+. ..+.+==+|.. +.+.++.+.+. |++-|-|.....
T Consensus 87 Gad~itvH~Ea--~---~~~~~~i~~i~~~G~k~gval~p~t-----~~e~l~~~l~~~D~Vl~msv~pGf~Gq~f~~~~ 156 (228)
T 3ovp_A 87 GANQYTFHLEA--T---ENPGALIKDIRENGMKVGLAIKPGT-----SVEYLAPWANQIDMALVMTVEPGFGGQKFMEDM 156 (228)
T ss_dssp TCSEEEEEGGG--C---SCHHHHHHHHHHTTCEEEEEECTTS-----CGGGTGGGGGGCSEEEEESSCTTTCSCCCCGGG
T ss_pred CCCEEEEccCC--c---hhHHHHHHHHHHcCCCEEEEEcCCC-----CHHHHHHHhccCCeEEEeeecCCCCCcccCHHH
Confidence 99999885311 1 2355555666554 33333333421 23444444432 222232221111
Q ss_pred -hhHh---hhhC-CCeEEEecCcchhHhHHHHcCCceeecccc
Q 018443 219 -DRVE---HYTG-NGIVVWSGNDDQCHDARWNHGATGVISVTS 256 (356)
Q Consensus 219 -~~i~---~~~~-~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~ 256 (356)
.+++ +... -.+.|=.|-...-......+|+|+++.|.+
T Consensus 157 l~ki~~lr~~~~~~~I~VdGGI~~~t~~~~~~aGAd~~VvGsa 199 (228)
T 3ovp_A 157 MPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSA 199 (228)
T ss_dssp HHHHHHHHHHCTTCEEEEESSCSTTTHHHHHHHTCCEEEESHH
T ss_pred HHHHHHHHHhcCCCCEEEeCCcCHHHHHHHHHcCCCEEEEeHH
Confidence 1222 2221 224444454433334456899999999865
No 302
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=79.56 E-value=17 Score=37.37 Aligned_cols=121 Identities=12% Similarity=0.038 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHCCCCEEEEccCccc----------------ccCCCHHHHHHHHHH----HHHHhCCCcEEEEec----
Q 018443 76 EAYDDLVNMQIVNGAEGMIVGGTTGE----------------GQLMSWDEHIMLIGH----TVNCFGASVKVIGNT---- 131 (356)
Q Consensus 76 ~~l~~~v~~li~~Gv~Gl~v~GstGE----------------~~~Lt~eEr~~li~~----~~~~~~grvpVi~gv---- 131 (356)
+.+.+-..+..++|.|||=+.|..|- -+-=|.+-|.+++.. +.+.++.+.||.+=+
T Consensus 156 ~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~ 235 (690)
T 3k30_A 156 RWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEE 235 (690)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCC
T ss_pred HHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccc
Confidence 44445555566789999999777665 111246666655544 445566677876654
Q ss_pred ---CCCCHHHHHHHHHHHHHcCCCEEEEcC---------CCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCH
Q 018443 132 ---GSNSTREAIHATEQGFAVGMHAALHIN---------PYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPP 197 (356)
Q Consensus 132 ---g~~st~~ai~lar~a~~~Gadavlv~p---------P~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~ 197 (356)
++.+.++++++++.+++ |+|.+-+.. |.|.... ....+.+.|.+. .|||. .|---++
T Consensus 236 ~~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~pvi~------~G~i~~~ 306 (690)
T 3k30_A 236 EIDGGITREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEG--RQEEFVAGLKKLTTKPVVG------VGRFTSP 306 (690)
T ss_dssp CSTTSCCHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTT--TTHHHHTTSGGGCSSCEEE------CSCCCCH
T ss_pred cCCCCCCHHHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCcc--ccHHHHHHHHHHcCCeEEE------eCCCCCH
Confidence 23457999999999998 799876542 3332211 112333344443 47654 2433467
Q ss_pred HHHHHHhc
Q 018443 198 RVIHTMAQ 205 (356)
Q Consensus 198 ~~l~~La~ 205 (356)
+..+++.+
T Consensus 307 ~~a~~~l~ 314 (690)
T 3k30_A 307 DAMVRQIK 314 (690)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77777664
No 303
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=79.51 E-value=24 Score=33.32 Aligned_cols=81 Identities=15% Similarity=0.085 Sum_probs=58.1
Q ss_pred HHHHHHHHHHH--HHCCCCEEEEc--cCc--------ccccCCCHHHHHHHHHHHHHHhCCCcEEEE-ecCCCCHHHHHH
Q 018443 75 LEAYDDLVNMQ--IVNGAEGMIVG--GTT--------GEGQLMSWDEHIMLIGHTVNCFGASVKVIG-NTGSNSTREAIH 141 (356)
Q Consensus 75 ~~~l~~~v~~l--i~~Gv~Gl~v~--Gst--------GE~~~Lt~eEr~~li~~~~~~~~grvpVi~-gvg~~st~~ai~ 141 (356)
.+.+..-++.. .+-|+|=+=+. |+. || ...|.+|-.+-++.+++. ..+|+|+ +-| .+.++.++
T Consensus 187 p~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~-~~y~~~ea~~~f~~~~~a--~~~P~v~lsgG-~~~~~fl~ 262 (332)
T 3iv3_A 187 VHKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGE-VVYSKEEAAQAFREQEAS--TDLPYIYLSAG-VSAELFQE 262 (332)
T ss_dssp HHHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSC-CCBCHHHHHHHHHHHHHT--CSSCEEEECTT-CCHHHHHH
T ss_pred HHHHHHHHHHHhhcCcCCcEEEEecCCChhhhccccccc-ccccHHHHHHHHHHHHhc--CCCCEEEECCC-CCHHHHHH
Confidence 33477777777 56699977543 322 23 456888887777777764 3689764 555 47899999
Q ss_pred HHHHHHHcCC--CEEEEcCC
Q 018443 142 ATEQGFAVGM--HAALHINP 159 (356)
Q Consensus 142 lar~a~~~Ga--davlv~pP 159 (356)
..+.|.++|+ .++++---
T Consensus 263 ~v~~A~~aGa~f~Gv~~GRn 282 (332)
T 3iv3_A 263 TLVFAHKAGAKFNGVLCGRA 282 (332)
T ss_dssp HHHHHHHHTCCCCEEEECHH
T ss_pred HHHHHHHcCCCcceEEeeHH
Confidence 9999999999 99998643
No 304
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=79.47 E-value=18 Score=34.71 Aligned_cols=144 Identities=8% Similarity=-0.036 Sum_probs=99.4
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHHHHHHHHHHcC
Q 018443 72 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVG 150 (356)
Q Consensus 72 ~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai~lar~a~~~G 150 (356)
.-+.+.+.+.++.+.+.|.+.+=+--.. +.++=.+.++.+.+.++.++++.+=+ ++-+.++++++++..++.|
T Consensus 149 ~~~~e~~~~~a~~~~~~G~~~iKiKvG~------~~~~d~~~v~avR~a~g~d~~l~vDan~~~~~~~A~~~~~~l~~~~ 222 (389)
T 3ozy_A 149 DLTPDQAADELAGWVEQGFTAAKLKVGR------APRKDAANLRAMRQRVGADVEILVDANQSLGRHDALAMLRILDEAG 222 (389)
T ss_dssp SCCHHHHHHHHHHHHHTTCSEEEEECCS------CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHCCCCEEeeccCC------CHHHHHHHHHHHHHHcCCCceEEEECCCCcCHHHHHHHHHHHHhcC
Confidence 3567889999999999999998653221 67888888999999998889998865 4568999999999999999
Q ss_pred CCEEEEcCCCCCCCCHHHHHHHHHHHH-hc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEEEeecC--chh---h
Q 018443 151 MHAALHINPYYGKTSLEGLISHFDSVL-SM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV--GND---R 220 (356)
Q Consensus 151 adavlv~pP~y~~~s~~~l~~y~~~va-~~--~PiilYn~P~~tG~~ls~~~l~~La~--~pnivGiK~s~--~d~---~ 220 (356)
++.+= -|.- ..+ .+.+++|. +. .||+.=. ...+++.+.++.+ .-.++-+|-+. |-. +
T Consensus 223 i~~iE--qP~~-~~d----~~~~~~l~~~~~~iPIa~dE------~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 289 (389)
T 3ozy_A 223 CYWFE--EPLS-IDD----IEGHRILRAQGTPVRIATGE------NLYTRNAFNDYIRNDAIDVLQADASRAGGITEALA 289 (389)
T ss_dssp CSEEE--SCSC-TTC----HHHHHHHHTTCCSSEEEECT------TCCHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHH
T ss_pred CCEEE--CCCC-ccc----HHHHHHHHhcCCCCCEEeCC------CCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 87763 3432 112 34567787 66 4665432 2345778888874 46788888654 222 3
Q ss_pred Hhhhh-CCCeEEEec
Q 018443 221 VEHYT-GNGIVVWSG 234 (356)
Q Consensus 221 i~~~~-~~~~~v~~G 234 (356)
+.++. ..++.++.|
T Consensus 290 ia~~A~~~gi~~~~h 304 (389)
T 3ozy_A 290 ISASAASAHLAWNPH 304 (389)
T ss_dssp HHHHHHHTTCEECCC
T ss_pred HHHHHHHcCCEEEec
Confidence 33332 235666555
No 305
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=79.47 E-value=42 Score=31.55 Aligned_cols=125 Identities=11% Similarity=0.013 Sum_probs=88.1
Q ss_pred CHHHHHHHHHHHHH-CCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHHHHHHHHHHcCC
Q 018443 74 DLEAYDDLVNMQIV-NGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 151 (356)
Q Consensus 74 D~~~l~~~v~~li~-~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai~lar~a~~~Ga 151 (356)
|.+.+.+.+...++ .|.+++=+-...+ +.++-.+.++.+.+.++.++++.+-+ ++.+.++++++++..++.|+
T Consensus 142 ~~e~~~~~a~~~~~~~Gf~~iKik~g~~-----~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i 216 (370)
T 1nu5_A 142 DTARDIDSALEMIETRRHNRFKVKLGAR-----TPAQDLEHIRSIVKAVGDRASVRVDVNQGWDEQTASIWIPRLEEAGV 216 (370)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEECSSS-----CHHHHHHHHHHHHHHHGGGCEEEEECTTCCCHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCCccEEEEecCCC-----ChHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCc
Confidence 56778888888888 9999986644332 34556778888888887788887755 45689999999999999998
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEEEeecC
Q 018443 152 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV 216 (356)
Q Consensus 152 davlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~--~pnivGiK~s~ 216 (356)
+.+ --|. ...+ .+.++++.+. .||+.=. .-.+++.+.++.+ .-+++-+|-+-
T Consensus 217 ~~i--EqP~-~~~~----~~~~~~l~~~~~ipIa~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~ 272 (370)
T 1nu5_A 217 ELV--EQPV-PRAN----FGALRRLTEQNGVAILADE------SLSSLSSAFELARDHAVDAFSLKLCN 272 (370)
T ss_dssp CEE--ECCS-CTTC----HHHHHHHHHHCSSEEEEST------TCCSHHHHHHHHHTTCCSEEEECHHH
T ss_pred ceE--eCCC-Cccc----HHHHHHHHHhCCCCEEeCC------CCCCHHHHHHHHHhCCCCEEEEchhh
Confidence 854 4453 1112 4455667665 4665432 2356788888874 47899999653
No 306
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=79.12 E-value=17 Score=32.12 Aligned_cols=59 Identities=10% Similarity=0.058 Sum_probs=42.1
Q ss_pred cEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCC
Q 018443 125 VKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVP 188 (356)
Q Consensus 125 vpVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~P 188 (356)
..++......+.++..+..+...+.++|++++.+. +.+.....++.+.+. .|++++|.+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~-----~~~~~~~~~~~~~~~~iPvV~~~~~ 95 (291)
T 3l49_A 36 GTAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQLG-----NLDVLNPWLQKINDAGIPLFTVDTA 95 (291)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHCCSEEEEESS-----CHHHHHHHHHHHHHTTCCEEEESCC
T ss_pred CEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCC-----ChhhhHHHHHHHHHCCCcEEEecCC
Confidence 45555555567777788888888889999998754 334555667777666 799998865
No 307
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=78.99 E-value=12 Score=35.34 Aligned_cols=114 Identities=9% Similarity=0.033 Sum_probs=80.6
Q ss_pred EeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccC-cc-----c--ccCCCHHHHHHHHHHHHHHhCCCcEEEEec-
Q 018443 61 TAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGT-TG-----E--GQLMSWDEHIMLIGHTVNCFGASVKVIGNT- 131 (356)
Q Consensus 61 ~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~Gs-tG-----E--~~~Lt~eEr~~li~~~~~~~~grvpVi~gv- 131 (356)
..++|.+|. ...++++ +.|++.|++.|+ .+ - .-.+|.+|....++.+.+.++ ++||++=.
T Consensus 41 i~~~~ayD~-------~sA~i~e---~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~-~~PviaD~d 109 (318)
T 1zlp_A 41 VLMPGVQDA-------LSAAVVE---KTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAP-NLCVVVDGD 109 (318)
T ss_dssp EEEEEECSH-------HHHHHHH---HTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSS-SSEEEEECT
T ss_pred EEEecCCCH-------HHHHHHH---HcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhcc-CCCEEEeCC
Confidence 345777762 2333443 579999999883 44 1 246899999999999888764 58999943
Q ss_pred -CCCCHHHHHHHHHHHHHcCCCEEEEcCCCC-------C---CCCHHHHHHHHHHHHhc---CCeEEE
Q 018443 132 -GSNSTREAIHATEQGFAVGMHAALHINPYY-------G---KTSLEGLISHFDSVLSM---GPTIIY 185 (356)
Q Consensus 132 -g~~st~~ai~lar~a~~~Gadavlv~pP~y-------~---~~s~~~l~~y~~~va~~---~PiilY 185 (356)
|-.+..++.+.++...++|+++|-+---.. . -.++++..+-.+++.++ .+++|.
T Consensus 110 ~Gyg~~~~v~~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ 177 (318)
T 1zlp_A 110 TGGGGPLNVQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLV 177 (318)
T ss_dssp TCSSSHHHHHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEE
Confidence 323889999999999999999998754221 1 24677777777777765 355544
No 308
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=78.93 E-value=6.2 Score=38.61 Aligned_cols=16 Identities=13% Similarity=0.075 Sum_probs=12.6
Q ss_pred HHHcCCceeecccccc
Q 018443 243 RWNHGATGVISVTSNL 258 (356)
Q Consensus 243 ~l~~Ga~G~is~~~n~ 258 (356)
.+..|++++..+++.+
T Consensus 363 ~l~aGAd~VqIgra~l 378 (415)
T 3i65_A 363 KIEAGASVCQLYSCLV 378 (415)
T ss_dssp HHHHTEEEEEESHHHH
T ss_pred HHHcCCCEEEEcHHHH
Confidence 4678999998887754
No 309
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=78.63 E-value=43 Score=31.19 Aligned_cols=144 Identities=12% Similarity=0.091 Sum_probs=96.5
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHHHHHHHHHHcCCC
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGMH 152 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai~lar~a~~~Gad 152 (356)
|.+.+.+.++...+.|.+.+=+-... +.++=.++++.+.+. +.++++.+-+ ++.+.++++++++..++.|++
T Consensus 139 ~~~~~~~~a~~~~~~Gf~~iKik~g~------~~~~d~~~v~avr~~-g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~ 211 (345)
T 2zad_A 139 TVENRVKEAKKIFEEGFRVIKIKVGE------NLKEDIEAVEEIAKV-TRGAKYIVDANMGYTQKEAVEFARAVYQKGID 211 (345)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCS------CHHHHHHHHHHHHHH-STTCEEEEECTTCSCHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHcCcCEEEEeecC------CHHHHHHHHHHHHhh-CCCCeEEEECCCCCCHHHHHHHHHHHHhcCCC
Confidence 67788888898999999998653221 466667778888877 7788988755 455899999999999999988
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh--cCCCEEEEeecCch-h---hHhhh
Q 018443 153 AALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA--QSPNLAGVKECVGN-D---RVEHY 224 (356)
Q Consensus 153 avlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La--~~pnivGiK~s~~d-~---~i~~~ 224 (356)
..++--|.- +.+ .+.++++.+. .||+.=. .-.+++.+.++. ..-+++-+|-+-|- . ++.++
T Consensus 212 ~~~iE~P~~--~~~---~~~~~~l~~~~~ipia~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~GGit~~~~i~~~ 280 (345)
T 2zad_A 212 IAVYEQPVR--RED---IEGLKFVRFHSPFPVAADE------SARTKFDVMRLVKEEAVDYVNIKLMKSGISDALAIVEI 280 (345)
T ss_dssp CSEEECCSC--TTC---HHHHHHHHHHSSSCEEEST------TCCSHHHHHHHHHHTCCSEEEECHHHHHHHHHHHHHHH
T ss_pred eeeeeCCCC--ccc---HHHHHHHHHhCCCCEEEeC------CcCCHHHHHHHHHhCCCCEEEEecccccHHHHHHHHHH
Confidence 223445532 221 4455666665 5776533 234678888887 35789999876532 1 33333
Q ss_pred h-CCCeEEEecC
Q 018443 225 T-GNGIVVWSGN 235 (356)
Q Consensus 225 ~-~~~~~v~~G~ 235 (356)
. ..++.++.|.
T Consensus 281 A~~~g~~~~~~~ 292 (345)
T 2zad_A 281 AESSGLKLMIGC 292 (345)
T ss_dssp HHTTTCEEEECC
T ss_pred HHHcCCeEEEec
Confidence 2 3466666553
No 310
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=78.62 E-value=29 Score=30.32 Aligned_cols=168 Identities=13% Similarity=0.026 Sum_probs=88.5
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEc---cCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHc
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVG---GTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAV 149 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~---GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~ 149 (356)
.|+..+.+.++.+.+.|++-+-+- |+.=+..+... ++++.+.+.+ +.++.+++--++.. ++++.+.++
T Consensus 16 ~d~~~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~----~~~~~lr~~~--~~~~~v~lmv~d~~---~~i~~~~~a 86 (228)
T 1h1y_A 16 SDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGA----PVIQSLRKHT--KAYLDCHLMVTNPS---DYVEPLAKA 86 (228)
T ss_dssp SCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCH----HHHHHHHTTC--CSEEEEEEESSCGG---GGHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEEecCCcCcchhhCH----HHHHHHHhhc--CCcEEEEEEecCHH---HHHHHHHHc
Confidence 457888899999999999976322 22222222223 4555555544 35677666545543 356667779
Q ss_pred CCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHhc---CCCEEEE--------eecCc
Q 018443 150 GMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMAQ---SPNLAGV--------KECVG 217 (356)
Q Consensus 150 Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~P~~tG~~ls~~~l~~La~---~pnivGi--------K~s~~ 217 (356)
|+|++.+..-. +++.+.+..+.+.+. ..+++==+|. | +.+.++.+.+ ....+++ +..-.
T Consensus 87 gad~v~vH~~~----~~~~~~~~~~~i~~~g~~igv~~~p~-t----~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~ 157 (228)
T 1h1y_A 87 GASGFTFHIEV----SRDNWQELIQSIKAKGMRPGVSLRPG-T----PVEEVFPLVEAENPVELVLVMTVEPGFGGQKFM 157 (228)
T ss_dssp TCSEEEEEGGG----CTTTHHHHHHHHHHTTCEEEEEECTT-S----CGGGGHHHHHSSSCCSEEEEESSCTTCSSCCCC
T ss_pred CCCEEEECCCC----cccHHHHHHHHHHHcCCCEEEEEeCC-C----CHHHHHHHHhcCCCCCEEEEEeecCCCCcccCC
Confidence 99999765311 111124555666554 3444332442 1 2344555555 4555555 11100
Q ss_pred -h--hh---Hhhhh-CCCeEEEecCcchhHhHHHHcCCceeecccccc
Q 018443 218 -N--DR---VEHYT-GNGIVVWSGNDDQCHDARWNHGATGVISVTSNL 258 (356)
Q Consensus 218 -d--~~---i~~~~-~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~ 258 (356)
. .+ +++.. +-.+.+-.|-...-.......|+|+++.|.+-+
T Consensus 158 ~~~l~~i~~~~~~~~~~pi~v~GGI~~~ni~~~~~aGaD~vvvGsai~ 205 (228)
T 1h1y_A 158 PEMMEKVRALRKKYPSLDIEVDGGLGPSTIDVAASAGANCIVAGSSIF 205 (228)
T ss_dssp GGGHHHHHHHHHHCTTSEEEEESSCSTTTHHHHHHHTCCEEEESHHHH
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCcCHHHHHHHHHcCCCEEEECHHHH
Confidence 0 12 22333 223444455543333344567999999886533
No 311
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=78.56 E-value=40 Score=32.14 Aligned_cols=133 Identities=11% Similarity=0.006 Sum_probs=90.0
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccC----ccc-cc-----CC---CHHHHHHHHHHHHHHhCCCcEEEEec-CCCC
Q 018443 70 DGRFDLEAYDDLVNMQIVNGAEGMIVGGT----TGE-GQ-----LM---SWDEHIMLIGHTVNCFGASVKVIGNT-GSNS 135 (356)
Q Consensus 70 dg~ID~~~l~~~v~~li~~Gv~Gl~v~Gs----tGE-~~-----~L---t~eEr~~li~~~~~~~~grvpVi~gv-g~~s 135 (356)
++.+|.+.+.+.+....+.|.+++=+-.. .|- +. .- ..++=.+.++.+.+.++.++++.+-+ ++.+
T Consensus 142 ~~~~~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~avG~d~~l~vDan~~~~ 221 (403)
T 2ox4_A 142 KSKGRKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAVGPDVDIIVENHGHTD 221 (403)
T ss_dssp CCCCSHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSC
T ss_pred cccCCHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHhCCCCeEEEECCCCCC
Confidence 45678999999999999999999865431 121 00 01 12344577777788888889998865 4568
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEE
Q 018443 136 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAG 211 (356)
Q Consensus 136 t~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~--~pnivG 211 (356)
.++++++++..++.|++. +--|.- +. -.+.+++|.+. .||+.=. .-.+++.++++.+ .-+++-
T Consensus 222 ~~~ai~~~~~l~~~~i~~--iE~P~~--~~---d~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~i~~~~~d~v~ 288 (403)
T 2ox4_A 222 LVSAIQFAKAIEEFNIFF--YEEINT--PL---NPRLLKEAKKKIDIPLASGE------RIYSRWGFLPFLEDRSIDVIQ 288 (403)
T ss_dssp HHHHHHHHHHHGGGCEEE--EECCSC--TT---STHHHHHHHHTCCSCEEECT------TCCHHHHHHHHHHTTCCSEEC
T ss_pred HHHHHHHHHHHHhhCCCE--EeCCCC--hh---hHHHHHHHHHhCCCCEEecC------CcCCHHHHHHHHHcCCCCEEe
Confidence 999999999999988764 444531 11 14556777775 5666532 2345788888873 568888
Q ss_pred Eeec
Q 018443 212 VKEC 215 (356)
Q Consensus 212 iK~s 215 (356)
+|-+
T Consensus 289 ik~~ 292 (403)
T 2ox4_A 289 PDLG 292 (403)
T ss_dssp CCHH
T ss_pred cCcc
Confidence 8865
No 312
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=78.44 E-value=11 Score=35.91 Aligned_cols=104 Identities=15% Similarity=0.089 Sum_probs=64.7
Q ss_pred HHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEc
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~ 157 (356)
+...++.+++.|++.+.+.+.. . + .++++.+.+ ..++|++.+. + ++.++.+.+.|+|++.+.
T Consensus 111 ~~~~~~~~~~~g~~~V~~~~g~---~--~----~~~i~~~~~---~g~~v~~~v~--t----~~~a~~a~~~GaD~i~v~ 172 (369)
T 3bw2_A 111 YDAKLAVLLDDPVPVVSFHFGV---P--D----REVIARLRR---AGTLTLVTAT--T----PEEARAVEAAGADAVIAQ 172 (369)
T ss_dssp HHHHHHHHHHSCCSEEEEESSC---C--C----HHHHHHHHH---TTCEEEEEES--S----HHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEeCCC---C--c----HHHHHHHHH---CCCeEEEECC--C----HHHHHHHHHcCCCEEEEe
Confidence 5677888899999999875432 1 2 234444433 2468887774 2 345778889999999997
Q ss_pred CCCCCC----CCH--------HHHHHHHHHHHhc--CCeEEEeCCCCCCCCC-CHHHHHHHhcC
Q 018443 158 NPYYGK----TSL--------EGLISHFDSVLSM--GPTIIYNVPSRTGQDI-PPRVIHTMAQS 206 (356)
Q Consensus 158 pP~y~~----~s~--------~~l~~y~~~va~~--~PiilYn~P~~tG~~l-s~~~l~~La~~ 206 (356)
.|.+.. ..+ .......+++.+. .||+.= | .+ +++.+.++.+.
T Consensus 173 g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPViaa------G-GI~~~~~~~~~l~~ 229 (369)
T 3bw2_A 173 GVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVAA------G-GIMRGGQIAAVLAA 229 (369)
T ss_dssp CTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEEE------S-SCCSHHHHHHHHHT
T ss_pred CCCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEEE------C-CCCCHHHHHHHHHc
Confidence 664311 100 1235666677664 576643 3 35 78888777654
No 313
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=78.38 E-value=31 Score=32.26 Aligned_cols=71 Identities=20% Similarity=0.068 Sum_probs=45.9
Q ss_pred HHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHH----HHHHHhCC-----CcEEEEecCCCCHHHHHHHHHHHHHc
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIG----HTVNCFGA-----SVKVIGNTGSNSTREAIHATEQGFAV 149 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~----~~~~~~~g-----rvpVi~gvg~~st~~ai~lar~a~~~ 149 (356)
.++++.++++|++++.+.-+.+- .||.+...+.+. .+++.++. .+|++..++.. .. +.....+.
T Consensus 190 ~~~~~~~~~aGad~i~i~d~~~~--~lsp~~f~ef~~p~~k~i~~~i~~~~~~~~~~ii~~~~g~--~~---~l~~l~~~ 262 (354)
T 3cyv_A 190 TLYLNAQIKAGAQAVMIFDTWGG--VLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGG--GQ---WLEAMAET 262 (354)
T ss_dssp HHHHHHHHHTTCSEEEEECTTGG--GSCHHHHHHHTHHHHHHHHHHSCSEETTEECCEEEECTTT--TT---THHHHHTT
T ss_pred HHHHHHHHHhCCCEEEEeCCccc--cCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEECCCH--HH---HHHHHHhc
Confidence 44556777899999988776653 799888776653 33445543 37876655443 22 33344578
Q ss_pred CCCEEEE
Q 018443 150 GMHAALH 156 (356)
Q Consensus 150 Gadavlv 156 (356)
|+|++.+
T Consensus 263 g~d~i~~ 269 (354)
T 3cyv_A 263 GCDALGL 269 (354)
T ss_dssp SCSEEEC
T ss_pred CCCEEEe
Confidence 8998875
No 314
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=78.37 E-value=4.9 Score=34.83 Aligned_cols=158 Identities=13% Similarity=0.085 Sum_probs=83.1
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCC
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMH 152 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gad 152 (356)
.|.+.+.+.++.+.+.|++.|-+.-.+.+ . .+.++.+.+.. .+++++|.+.....+ .++.+.++|+|
T Consensus 16 ~d~~~~~~~~~~~~~~G~~~i~l~~~~~~-----~---~~~i~~i~~~~--~~~l~vg~g~~~~~~---~i~~a~~~Gad 82 (212)
T 2v82_A 16 ITPDEALAHVGAVIDAGFDAVEIPLNSPQ-----W---EQSIPAIVDAY--GDKALIGAGTVLKPE---QVDALARMGCQ 82 (212)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEETTSTT-----H---HHHHHHHHHHH--TTTSEEEEECCCSHH---HHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCChh-----H---HHHHHHHHHhC--CCCeEEEeccccCHH---HHHHHHHcCCC
Confidence 47888999999999999999976444322 1 23444444444 356777665544343 57778889999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHHHhc-CCCEEEEeecC--chhhHhhh---hC
Q 018443 153 AALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHTMAQ-SPNLAGVKECV--GNDRVEHY---TG 226 (356)
Q Consensus 153 avlv~pP~y~~~s~~~l~~y~~~va~~~PiilYn~P~~tG~~ls~~~l~~La~-~pnivGiK~s~--~d~~i~~~---~~ 226 (356)
++.+ |. ...++.+..+..- .++++ | .-+++.+.+..+ -...+++..+. +-..+.++ .+
T Consensus 83 ~V~~--~~----~~~~~~~~~~~~g--~~~~~-------g-~~t~~e~~~a~~~G~d~v~v~~t~~~g~~~~~~l~~~~~ 146 (212)
T 2v82_A 83 LIVT--PN----IHSEVIRRAVGYG--MTVCP-------G-CATATEAFTALEAGAQALKIFPSSAFGPQYIKALKAVLP 146 (212)
T ss_dssp EEEC--SS----CCHHHHHHHHHTT--CEEEC-------E-ECSHHHHHHHHHTTCSEEEETTHHHHCHHHHHHHHTTSC
T ss_pred EEEe--CC----CCHHHHHHHHHcC--CCEEe-------e-cCCHHHHHHHHHCCCCEEEEecCCCCCHHHHHHHHHhcc
Confidence 9962 22 1233333322211 23321 1 124554444433 23455552111 11223222 22
Q ss_pred CCeEEE--ecCcchhHhHHHHcCCceeeccccccc
Q 018443 227 NGIVVW--SGNDDQCHDARWNHGATGVISVTSNLV 259 (356)
Q Consensus 227 ~~~~v~--~G~d~~~l~~~l~~Ga~G~is~~~n~~ 259 (356)
.++.|+ .|-...-+...+..|++|++.|.+-+-
T Consensus 147 ~~ipvia~GGI~~~~i~~~~~~Ga~gv~vGsai~~ 181 (212)
T 2v82_A 147 SDIAVFAVGGVTPENLAQWIDAGCAGAGLGSDLYR 181 (212)
T ss_dssp TTCEEEEESSCCTTTHHHHHHHTCSEEEECTTTCC
T ss_pred CCCeEEEeCCCCHHHHHHHHHcCCCEEEEChHHhC
Confidence 134443 344322233446789999998876543
No 315
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=78.27 E-value=4.2 Score=38.25 Aligned_cols=120 Identities=18% Similarity=0.175 Sum_probs=64.3
Q ss_pred cCceeEeeecccCCCCC-CCHHHHHHHHHHHHHCCCCEEEEcc-Cccccc-CCC-HHHHHHHHHHHHHHhC-CCcEEEEe
Q 018443 56 ALRLITAIKTPYLPDGR-FDLEAYDDLVNMQIVNGAEGMIVGG-TTGEGQ-LMS-WDEHIMLIGHTVNCFG-ASVKVIGN 130 (356)
Q Consensus 56 ~~Gvi~al~TPf~~dg~-ID~~~l~~~v~~li~~Gv~Gl~v~G-stGE~~-~Lt-~eEr~~li~~~~~~~~-grvpVi~g 130 (356)
..||+-.-+=-|.+.|+ .|.+...++.+.+++.|++-|=|+| ||.-+. ..| .||..+++..+..... .++||-+=
T Consensus 12 iMGIlNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~vpiSID 91 (314)
T 2vef_A 12 ICGIINVTPDSFSDGGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESDVLISID 91 (314)
T ss_dssp EEEEEECCC---------CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred EEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCCceEEEe
Confidence 56777654444887776 4899999999999999999999998 553322 222 3666666654332221 15666554
Q ss_pred cCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018443 131 TGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNV 187 (356)
Q Consensus 131 vg~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~ 187 (356)
+.. . +-++.|-++|++-|--+.-. ... + +.+.-+++. +|+++-+.
T Consensus 92 T~~--~----~Va~aAl~aGa~iINDVsg~--~~d-~---~m~~v~a~~~~~vvlmh~ 137 (314)
T 2vef_A 92 TWK--S----QVAEAALAAGADLVNDITGL--MGD-E---KMPHVVAEARAQVVIMFN 137 (314)
T ss_dssp CSC--H----HHHHHHHHTTCCEEEETTTT--CSC-T---THHHHHHHHTCEEEEECC
T ss_pred CCC--H----HHHHHHHHcCCCEEEECCCC--CCC-h---HHHHHHHHcCCCEEEEec
Confidence 433 2 33455666688776554321 111 2 233334444 68877764
No 316
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=78.25 E-value=16 Score=33.15 Aligned_cols=25 Identities=8% Similarity=0.105 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCC
Q 018443 136 TREAIHATEQGFAVGMHAALHINPY 160 (356)
Q Consensus 136 t~~ai~lar~a~~~Gadavlv~pP~ 160 (356)
.++.-++.+.+++.|.+.+.++.|.
T Consensus 133 ~e~~~~~~~~~~~~g~~~i~l~~p~ 157 (268)
T 1qop_A 133 VEESAPFRQAALRHNIAPIFICPPN 157 (268)
T ss_dssp GGGCHHHHHHHHHTTCEEECEECTT
T ss_pred HHHHHHHHHHHHHcCCcEEEEECCC
Confidence 4556666677777777777666664
No 317
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=78.23 E-value=46 Score=31.38 Aligned_cols=132 Identities=9% Similarity=0.021 Sum_probs=92.4
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCcccccCC-CHHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHHHHHHHHHHc
Q 018443 72 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLM-SWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAV 149 (356)
Q Consensus 72 ~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~L-t~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai~lar~a~~~ 149 (356)
..+.+.+.+.++...+.|.+++=+-...|.+.++ ..++=.++++.+.+.++.++++.+=+ ++.+.++++++++..++.
T Consensus 147 ~~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~ 226 (382)
T 1rvk_A 147 LATPEDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAVGPDIRLMIDAFHWYSRTDALALGRGLEKL 226 (382)
T ss_dssp TSSHHHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHHCTTSEEEEECCTTCCHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhc
Confidence 3578889999999999999998654433322222 45556678888888888889998865 456899999999999999
Q ss_pred CCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCC-HHHHHHHhc--CCCEEEEeecC
Q 018443 150 GMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIP-PRVIHTMAQ--SPNLAGVKECV 216 (356)
Q Consensus 150 Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls-~~~l~~La~--~pnivGiK~s~ 216 (356)
|++.+ --|.- ..+ .+.++++.+. .||+.= +.-.+ ++.++++.+ .-+++-+|-+-
T Consensus 227 ~i~~i--E~P~~-~~~----~~~~~~l~~~~~iPIa~d------E~~~~~~~~~~~~i~~~~~d~v~ik~~~ 285 (382)
T 1rvk_A 227 GFDWI--EEPMD-EQS----LSSYKWLSDNLDIPVVGP------ESAAGKHWHRAEWIKAGACDILRTGVND 285 (382)
T ss_dssp TCSEE--ECCSC-TTC----HHHHHHHHHHCSSCEEEC------SSCSSHHHHHHHHHHTTCCSEEEECHHH
T ss_pred CCCEE--eCCCC-hhh----HHHHHHHHhhCCCCEEEe------CCccCcHHHHHHHHHcCCCCEEeeCchh
Confidence 98854 34432 112 4455667665 576653 23456 788888864 56899999753
No 318
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=78.04 E-value=4.8 Score=37.43 Aligned_cols=84 Identities=10% Similarity=0.041 Sum_probs=58.7
Q ss_pred CCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC---------CCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCC
Q 018443 123 ASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN---------PYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRT 191 (356)
Q Consensus 123 grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~p---------P~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~t 191 (356)
++.-++.++-... .|+.++++|+|++.+.- |-....|-+++..|.+.|++. .| ++-|.| +
T Consensus 14 ~~~i~~~~a~D~~------sA~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~P-viaD~d--~ 84 (290)
T 2hjp_A 14 GRLFTAMAAHNPL------VAKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVSIP-LIADID--T 84 (290)
T ss_dssp CCCEEEEECSSHH------HHHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCSSC-EEEECT--T
T ss_pred CCcEEEecCCCHH------HHHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCC-EEEECC--C
Confidence 3434566776543 35566678999999873 333456889999999999997 69 679998 4
Q ss_pred CCCCCHHHH----HHHhcCCCEEEEeecCc
Q 018443 192 GQDIPPRVI----HTMAQSPNLAGVKECVG 217 (356)
Q Consensus 192 G~~ls~~~l----~~La~~pnivGiK~s~~ 217 (356)
|+. +++.+ .++.+ -++.|||.+.+
T Consensus 85 Gyg-~~~~~~~~v~~l~~-aGa~gv~iED~ 112 (290)
T 2hjp_A 85 GFG-NAVNVHYVVPQYEA-AGASAIVMEDK 112 (290)
T ss_dssp TTS-SHHHHHHHHHHHHH-HTCSEEEEECB
T ss_pred CCC-CHHHHHHHHHHHHH-hCCeEEEEcCC
Confidence 665 66544 44444 68999997654
No 319
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=77.91 E-value=12 Score=35.93 Aligned_cols=101 Identities=14% Similarity=0.026 Sum_probs=67.9
Q ss_pred ecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEc-cCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCC-------
Q 018443 64 KTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVG-GTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS------- 135 (356)
Q Consensus 64 ~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~-GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~s------- 135 (356)
..|+-.|-.+|+..... .++.|++.+=++ |.-|. .+.-.++++.+.+ ..+|+-+||.+-|
T Consensus 84 ~vPlvaDiHf~~~lal~----a~e~G~dklRINPGNig~-----~~~~~~vv~~ak~---~~~piRIGvN~GSL~~~ll~ 151 (366)
T 3noy_A 84 PMPVIADIHFAPSYAFL----SMEKGVHGIRINPGNIGK-----EEIVREIVEEAKR---RGVAVRIGVNSGSLEKDLLE 151 (366)
T ss_dssp SSCEEEECCSCHHHHHH----HHHTTCSEEEECHHHHSC-----HHHHHHHHHHHHH---HTCEEEEEEEGGGCCHHHHH
T ss_pred CCCEEEeCCCCHHHHHH----HHHhCCCeEEECCcccCc-----hhHHHHHHHHHHH---cCCCEEEecCCcCCCHHHHH
Confidence 46887888889865544 678899999775 45552 3333344444443 3678888864443
Q ss_pred ----------HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc
Q 018443 136 ----------TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM 179 (356)
Q Consensus 136 ----------t~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~ 179 (356)
.+.+++.++.+++.|.+-+.+..... +-...++-|+.+++.
T Consensus 152 ~yg~~~~eamVeSAl~~~~~~e~~gf~~iviS~K~S---~v~~~i~ayr~la~~ 202 (366)
T 3noy_A 152 KYGYPSAEALAESALRWSEKFEKWGFTNYKVSIKGS---DVLQNVRANLIFAER 202 (366)
T ss_dssp HHSSCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECS---SHHHHHHHHHHHHHH
T ss_pred hcCCCCHHHHHHHHHHHHHHHHhCCCCeEEEeeecC---ChHHHHHHHHHHHhc
Confidence 35567788888899988877654332 456677888888876
No 320
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=77.83 E-value=5.9 Score=35.10 Aligned_cols=96 Identities=15% Similarity=0.057 Sum_probs=59.0
Q ss_pred eecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEE-EecCCC--CHHHH
Q 018443 63 IKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVI-GNTGSN--STREA 139 (356)
Q Consensus 63 l~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi-~gvg~~--st~~a 139 (356)
++|-++..+.. .+...++++...+.|++|+++.++- . +... .+.+..+. ..++ -|++.. +
T Consensus 103 vLts~s~~~~~-~~~v~~~a~~a~~~G~~GvV~sat~-------~-~e~~---~ir~~~~~-f~~v~pGI~~~g~~---- 165 (215)
T 3ve9_A 103 LVLSMSHPGWN-DAFYPYLREVARRVNPKGFVAPATR-------P-SMIS---RVKGDFPD-KLVISPGVGTQGAK---- 165 (215)
T ss_dssp EECCCSSTTCC-GGGHHHHHHHHHHHCCSEEECCTTS-------H-HHHH---HHHHHCTT-SEEEECCTTSTTCC----
T ss_pred EEEecCCcchH-HHHHHHHHHHHHHcCCCceeeCCCC-------H-HHHH---HHHHhCCC-cEEEcCCCCcCcCC----
Confidence 67877766544 4556677777778899999764431 2 2222 23344444 3333 488754 3
Q ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHH-HHHHHHHHHh
Q 018443 140 IHATEQGFAVGMHAALHINPYYGKTSLEG-LISHFDSVLS 178 (356)
Q Consensus 140 i~lar~a~~~Gadavlv~pP~y~~~s~~~-l~~y~~~va~ 178 (356)
...+.+.|+|.+++-.|.|...++.+ +.++.+++.+
T Consensus 166 ---~~~a~~~Gad~iVvGr~I~~a~dp~~a~~~i~~~i~~ 202 (215)
T 3ve9_A 166 ---PGIALCHGADYEIVGRSVYQSADPVRKLEEIVRSQEE 202 (215)
T ss_dssp ---TTHHHHTTCSEEEECHHHHTSSSHHHHHHHHHHHHHH
T ss_pred ---HHHHHHcCCCEEEeCHHHcCCCCHHHHHHHHHHHHHH
Confidence 34556789999999888887776654 4444445544
No 321
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=77.56 E-value=12 Score=33.19 Aligned_cols=160 Identities=15% Similarity=0.137 Sum_probs=102.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCC-CcEEEEec----CCCCHHHHHHHHHHHHH
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA-SVKVIGNT----GSNSTREAIHATEQGFA 148 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~g-rvpVi~gv----g~~st~~ai~lar~a~~ 148 (356)
..+.++++++...+.|++++++.-+ .++.+.+...+ +++|...+ |..+++.-+.-++.|.+
T Consensus 17 t~~~i~~l~~~a~~~~~~aVcv~p~--------------~v~~~~~~l~~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~ 82 (220)
T 1ub3_A 17 TLEEVAKAAEEALEYGFYGLCIPPS--------------YVAWVRARYPHAPFRLVTVVGFPLGYQEKEVKALEAALACA 82 (220)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECCGG--------------GHHHHHHHCTTCSSEEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEECHH--------------HHHHHHHHhCCCCceEEEEecCCCCCCchHHHHHHHHHHHH
Confidence 5788999999999999999987543 23344444444 56664444 33678888899999999
Q ss_pred cCCCEEEEcCCCC-C-CCCHHHHHHHHHHHHhcC-----CeEEEeCCCCCCCCCCHHHHHHHhc---CCCEEEEeecCc-
Q 018443 149 VGMHAALHINPYY-G-KTSLEGLISHFDSVLSMG-----PTIIYNVPSRTGQDIPPRVIHTMAQ---SPNLAGVKECVG- 217 (356)
Q Consensus 149 ~Gadavlv~pP~y-~-~~s~~~l~~y~~~va~~~-----PiilYn~P~~tG~~ls~~~l~~La~---~pnivGiK~s~~- 217 (356)
.|||.|-++.++- . ....+.+.+-..++.+++ |+| +. ++. ++++.+.+.++ --+.--||-++|
T Consensus 83 ~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvI-le----t~~-l~~e~i~~a~~ia~eaGADfVKTsTGf 156 (220)
T 1ub3_A 83 RGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVI-LE----TGY-FSPEEIARLAEAAIRGGADFLKTSTGF 156 (220)
T ss_dssp TTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEE-CC----GGG-SCHHHHHHHHHHHHHHTCSEEECCCSS
T ss_pred cCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEE-Ee----cCC-CCHHHHHHHHHHHHHhCCCEEEeCCCC
Confidence 9999997766532 2 346788888888888762 333 33 232 67887766654 235556898853
Q ss_pred --------hhh-HhhhhCCCeEE-Eec-Cc--chhHhHHHHcCCc--eeecc
Q 018443 218 --------NDR-VEHYTGNGIVV-WSG-ND--DQCHDARWNHGAT--GVISV 254 (356)
Q Consensus 218 --------d~~-i~~~~~~~~~v-~~G-~d--~~~l~~~l~~Ga~--G~is~ 254 (356)
|.+ +++....++.| .+| -- +.++ .++.+|++ |.-++
T Consensus 157 ~~~gat~~dv~~m~~~vg~~v~VkaaGGirt~~~al-~~i~aGa~RiG~S~g 207 (220)
T 1ub3_A 157 GPRGASLEDVALLVRVAQGRAQVKAAGGIRDRETAL-RMLKAGASRLGTSSG 207 (220)
T ss_dssp SSCCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHH-HHHHTTCSEEEETTH
T ss_pred CCCCCCHHHHHHHHHhhCCCCeEEEECCCCCHHHHH-HHHHCCCcccchhHH
Confidence 222 33333444443 233 32 2233 34678998 77544
No 322
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=77.55 E-value=38 Score=31.87 Aligned_cols=121 Identities=13% Similarity=-0.015 Sum_probs=88.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHHHHHHHH-HHcCC
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQG-FAVGM 151 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai~lar~a-~~~Ga 151 (356)
|.+.+.+.++...+.|.+++=+-... +.++=.++++.+.+.++.++++.+=+ ++.+.++++++++.. ++.|+
T Consensus 146 ~~~~~~~~a~~~~~~Gf~~iKik~g~------~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~~i 219 (371)
T 2ps2_A 146 EPEDMRARVAKYRAKGYKGQSVKISG------EPVTDAKRITAALANQQPDEFFIVDANGKLSVETALRLLRLLPHGLDF 219 (371)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEECCS------CHHHHHHHHHHHTTTCCTTCEEEEECTTBCCHHHHHHHHHHSCTTCCC
T ss_pred CHHHHHHHHHHHHHhChheEEeecCC------CHHHHHHHHHHHHHhcCCCCEEEEECCCCcCHHHHHHHHHHHHhhcCC
Confidence 67888888999999999998654321 46666778888888787788988765 456899999999999 88887
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEEEeecC
Q 018443 152 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV 216 (356)
Q Consensus 152 davlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~--~pnivGiK~s~ 216 (356)
.+--|.. + .+.++++.+. .||+.=. .-.+++.++++.+ .-+++-+|-+-
T Consensus 220 ---~iE~P~~---~----~~~~~~l~~~~~iPI~~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~ 272 (371)
T 2ps2_A 220 ---ALEAPCA---T----WRECISLRRKTDIPIIYDE------LATNEMSIVKILADDAAEGIDLKISK 272 (371)
T ss_dssp ---EEECCBS---S----HHHHHHHHTTCCSCEEEST------TCCSHHHHHHHHHHTCCSEEEEEHHH
T ss_pred ---cCcCCcC---C----HHHHHHHHhhCCCCEEeCC------CcCCHHHHHHHHHhCCCCEEEechhh
Confidence 4455643 2 4566777775 5765432 2356788888763 57899999754
No 323
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=77.52 E-value=6.9 Score=33.61 Aligned_cols=65 Identities=9% Similarity=-0.047 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhC-CCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEE
Q 018443 77 AYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFG-ASVKVIGNTGSNSTREAIHATEQGFAVGMHAAL 155 (356)
Q Consensus 77 ~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~-grvpVi~gvg~~st~~ai~lar~a~~~Gadavl 155 (356)
.+.+.++.+.+.|++.+-+- ...++.++..++++.+.+... -++++++. +.++.+.++|+|++.
T Consensus 27 ~~~~~~~~~~~~G~~~i~l~-----~~~~~~~~~~~~~~~l~~~~~~~~v~v~v~----------~~~~~a~~~gad~v~ 91 (215)
T 1xi3_A 27 PEVESVREALEGGATAIQMR-----IKNAPTREMYEIGKTLRQLTREYDALFFVD----------DRVDVALAVDADGVQ 91 (215)
T ss_dssp CHHHHHHHHHHTTCSEEEEC-----CCSCCHHHHHHHHHHHHHHHHHTTCEEEEE----------SCHHHHHHHTCSEEE
T ss_pred hHHHHHHHHHHCCCCEEEEC-----CCCCCHHHHHHHHHHHHHHHHHcCCeEEEc----------ChHHHHHHcCCCEEE
Confidence 45677888889999998543 244677777777776665443 36788874 233567788999997
Q ss_pred E
Q 018443 156 H 156 (356)
Q Consensus 156 v 156 (356)
+
T Consensus 92 l 92 (215)
T 1xi3_A 92 L 92 (215)
T ss_dssp E
T ss_pred E
Confidence 6
No 324
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=77.52 E-value=22 Score=33.33 Aligned_cols=41 Identities=7% Similarity=0.050 Sum_probs=25.6
Q ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCH----HHHHHHHHHHHhc
Q 018443 139 AIHATEQGFAVGMHAALHINPYYGKTSL----EGLISHFDSVLSM 179 (356)
Q Consensus 139 ai~lar~a~~~Gadavlv~pP~y~~~s~----~~l~~y~~~va~~ 179 (356)
.++.++...++|+|++.+..|.-...|+ +-+..|++.|.+.
T Consensus 189 ~~~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~ 233 (354)
T 3cyv_A 189 VTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDG 233 (354)
T ss_dssp HHHHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHH
Confidence 4555666667888888877764444555 3355666666653
No 325
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=77.44 E-value=6.4 Score=37.81 Aligned_cols=67 Identities=16% Similarity=0.152 Sum_probs=39.9
Q ss_pred HHHHHHHHCCCCEEEEccCc--ccccC--CCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEE
Q 018443 80 DLVNMQIVNGAEGMIVGGTT--GEGQL--MSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAAL 155 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~Gst--GE~~~--Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavl 155 (356)
...+.+.+.|++.+.+.++. .|+.. +++++ ++.+++.+ ++||++|-. .+.++ ++.+.++|+|+|.
T Consensus 169 e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~----i~~l~~~~--~~pvi~ggi-~t~e~----a~~~~~~Gad~i~ 237 (393)
T 2qr6_A 169 EIAPIVIKAGADLLVIQGTLISAEHVNTGGEALN----LKEFIGSL--DVPVIAGGV-NDYTT----ALHMMRTGAVGII 237 (393)
T ss_dssp HHHHHHHHTTCSEEEEECSSCCSSCCCC-----C----HHHHHHHC--SSCEEEECC-CSHHH----HHHHHTTTCSEEE
T ss_pred HHHHHHHHCCCCEEEEeCCccccccCCCcccHHH----HHHHHHhc--CCCEEECCc-CCHHH----HHHHHHcCCCEEE
Confidence 34455567899999876654 33221 23332 33444444 689998532 34443 6777889999999
Q ss_pred Ec
Q 018443 156 HI 157 (356)
Q Consensus 156 v~ 157 (356)
+.
T Consensus 238 vg 239 (393)
T 2qr6_A 238 VG 239 (393)
T ss_dssp ES
T ss_pred EC
Confidence 94
No 326
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=77.43 E-value=9.9 Score=36.42 Aligned_cols=86 Identities=14% Similarity=0.091 Sum_probs=56.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccC----cccccCCCHHHHHHHHHHHHHHh-----CCCcEEEEecCCC-CHHHHHHHH
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGT----TGEGQLMSWDEHIMLIGHTVNCF-----GASVKVIGNTGSN-STREAIHAT 143 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~Gs----tGE~~~Lt~eEr~~li~~~~~~~-----~grvpVi~gvg~~-st~~ai~la 143 (356)
+.+.+.+.++.+- .+++.|-+|-| -|-...-+.+.-.++++.+.+.. ..++||++=+... +.++..+.+
T Consensus 162 ~~~dy~~~~~~~~-~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia 240 (367)
T 3zwt_A 162 AAEDYAEGVRVLG-PLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIA 240 (367)
T ss_dssp HHHHHHHHHHHHG-GGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHh-hhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHH
Confidence 4566666666653 46888888754 23333334455556777666541 1367988866543 456888999
Q ss_pred HHHHHcCCCEEEEcCCC
Q 018443 144 EQGFAVGMHAALHINPY 160 (356)
Q Consensus 144 r~a~~~Gadavlv~pP~ 160 (356)
+.++++|+|++.+..-.
T Consensus 241 ~~~~~aGadgi~v~ntt 257 (367)
T 3zwt_A 241 SVVKELGIDGLIVTNTT 257 (367)
T ss_dssp HHHHHHTCCEEEECCCB
T ss_pred HHHHHcCCCEEEEeCCC
Confidence 99999999999887644
No 327
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=77.40 E-value=43 Score=30.52 Aligned_cols=89 Identities=20% Similarity=0.106 Sum_probs=51.9
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCC-CcEEEEecCCCCHHHHHHHHHHHHH
Q 018443 70 DGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA-SVKVIGNTGSNSTREAIHATEQGFA 148 (356)
Q Consensus 70 dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~g-rvpVi~gvg~~st~~ai~lar~a~~ 148 (356)
-|.-..+.-..-++..++.|++-|=+.=.-|..-+=.+++-.+-+..+++.+++ -++||.-++..+.++-+..++.|.+
T Consensus 105 ~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~e 184 (260)
T 3r12_A 105 LGANETRTKAHEAIFAVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYLDTEEKIAACVISKL 184 (260)
T ss_dssp TCCSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 344455666666677777777766444444443333455555555555555443 3456666666666666666677777
Q ss_pred cCCCEEEEcC
Q 018443 149 VGMHAALHIN 158 (356)
Q Consensus 149 ~Gadavlv~p 158 (356)
+|||.|=...
T Consensus 185 aGADfVKTST 194 (260)
T 3r12_A 185 AGAHFVKTST 194 (260)
T ss_dssp TTCSEEECCC
T ss_pred hCcCEEEcCC
Confidence 7777765543
No 328
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=77.31 E-value=5.6 Score=37.87 Aligned_cols=66 Identities=6% Similarity=0.007 Sum_probs=43.8
Q ss_pred HHHHHHHC--CCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEc
Q 018443 81 LVNMQIVN--GAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 81 ~v~~li~~--Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~ 157 (356)
.++.+++. |++.+.+-.+.|. ...-.+.++.+.+..+ ++||++|... + .+.++.+.++|+|+|.+.
T Consensus 122 ~~~~l~~~~~g~~~i~i~~~~g~-----~~~~~~~i~~lr~~~~-~~~vi~g~v~-t----~e~A~~a~~aGaD~I~v~ 189 (351)
T 2c6q_A 122 QLEQILEAIPQVKYICLDVANGY-----SEHFVEFVKDVRKRFP-QHTIMAGNVV-T----GEMVEELILSGADIIKVG 189 (351)
T ss_dssp HHHHHHHHCTTCCEEEEECSCTT-----BHHHHHHHHHHHHHCT-TSEEEEEEEC-S----HHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHhccCCCCEEEEEecCCC-----cHHHHHHHHHHHHhcC-CCeEEEEeCC-C----HHHHHHHHHhCCCEEEEC
Confidence 45556665 8998876544442 2344556666666653 6899876432 2 466788899999999774
No 329
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=77.30 E-value=8.5 Score=35.93 Aligned_cols=106 Identities=8% Similarity=0.084 Sum_probs=74.7
Q ss_pred eeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEcc-Cc-----cc--ccCCCHHHHHHHHHHHHHHhCCCcEEEEec--
Q 018443 62 AIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGG-TT-----GE--GQLMSWDEHIMLIGHTVNCFGASVKVIGNT-- 131 (356)
Q Consensus 62 al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~G-st-----GE--~~~Lt~eEr~~li~~~~~~~~grvpVi~gv-- 131 (356)
.++|.+|. ...++++ +.|++.+++.| +. |- .-.+|.+|....++.+.+.+ ++||++=.
T Consensus 25 ~~~~a~D~-------~sA~l~e---~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~--~~PviaD~d~ 92 (298)
T 3eoo_A 25 QVVGAITA-------YAAKMAE---AVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNAT--NLPLLVDIDT 92 (298)
T ss_dssp EEEECSSH-------HHHHHHH---HHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHC--CSCEEEECTT
T ss_pred EEecCCCH-------HHHHHHH---HcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhc--CCeEEEECCC
Confidence 45677752 2333333 46999999988 33 32 23578999999999888866 47999843
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCC----------CCCHHHHHHHHHHHHhc
Q 018443 132 GSNSTREAIHATEQGFAVGMHAALHINPYYG----------KTSLEGLISHFDSVLSM 179 (356)
Q Consensus 132 g~~st~~ai~lar~a~~~Gadavlv~pP~y~----------~~s~~~l~~y~~~va~~ 179 (356)
|..+..++.+.++...++|+++|-+---... -.+.++..+-.++..++
T Consensus 93 Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A 150 (298)
T 3eoo_A 93 GWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDA 150 (298)
T ss_dssp CSSSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHh
Confidence 4347889999999999999999987653321 13667777777776665
No 330
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=77.25 E-value=7.9 Score=37.03 Aligned_cols=78 Identities=10% Similarity=-0.007 Sum_probs=49.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcccc----------------------cC---------------------CCHHHH
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGEG----------------------QL---------------------MSWDEH 110 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE~----------------------~~---------------------Lt~eEr 110 (356)
|.+...++++...+.|++.+.+.-.+--. .. ++...-
T Consensus 134 d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~ 213 (370)
T 1gox_A 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLS 213 (370)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCC
T ss_pred CchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccch
Confidence 67778889999999999998775543110 00 011111
Q ss_pred HHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC
Q 018443 111 IMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN 158 (356)
Q Consensus 111 ~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~p 158 (356)
.+.++.+.+.+ ++||++... .+ .+.++.+.++|+|+|.+.+
T Consensus 214 ~~~i~~l~~~~--~~pv~vK~~-~~----~e~a~~a~~~Gad~I~vs~ 254 (370)
T 1gox_A 214 WKDVAWLQTIT--SLPILVKGV-IT----AEDARLAVQHGAAGIIVSN 254 (370)
T ss_dssp HHHHHHHHHHC--CSCEEEECC-CS----HHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHh--CCCEEEEec-CC----HHHHHHHHHcCCCEEEECC
Confidence 23355555554 579988433 23 3567889999999999853
No 331
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=77.24 E-value=14 Score=35.02 Aligned_cols=108 Identities=12% Similarity=0.087 Sum_probs=67.1
Q ss_pred HHHHHHHHHCCCCE-EEEccCcccccCCCHHHHHHHHH-------HHHHHhCCCcEEEEecCCCCHHHHHHHHHHH-HHc
Q 018443 79 DDLVNMQIVNGAEG-MIVGGTTGEGQLMSWDEHIMLIG-------HTVNCFGASVKVIGNTGSNSTREAIHATEQG-FAV 149 (356)
Q Consensus 79 ~~~v~~li~~Gv~G-l~v~GstGE~~~Lt~eEr~~li~-------~~~~~~~grvpVi~gvg~~st~~ai~lar~a-~~~ 149 (356)
+..++.+-+.||+. |+..++.+ ...+..++...+.+ .+++...+|.--++.+.-...+++++..+++ ++.
T Consensus 76 ~~rl~~MD~~GI~~~Vls~~~~~-~~~~~~~~a~~~~r~~Nd~l~~~~~~~P~Rf~g~a~v~~~~~~~a~~El~r~~~~~ 154 (357)
T 3nur_A 76 DERIQFMNNQDVQIQVLSYGNGS-PSNLVGQKAIELCQKANDQLANYIAQYPNRFVGFATLPINEPEAAAREFERCINDL 154 (357)
T ss_dssp HHHHHHHHHTTEEEEEEEECTTC-GGGSCHHHHHHHHHHHHHHHHHHHHHSTTTEEECBCCCTTSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCCCcEEEEeCCCCc-cccCCHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEeCCCCCHHHHHHHHHHHHhhc
Confidence 55666666889986 55455544 22344444433322 2223335564334444333567788888886 579
Q ss_pred CCCEEEEcCCCC-CCCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018443 150 GMHAALHINPYY-GKTSLEGLISHFDSVLSM-GPTIIYNV 187 (356)
Q Consensus 150 Gadavlv~pP~y-~~~s~~~l~~y~~~va~~-~PiilYn~ 187 (356)
|+.++.+.+.+- ..++++.+...|+.+.+. .||+++--
T Consensus 155 G~~Gv~l~~~~~~~~~~d~~~~p~~~~~~e~g~pV~iH~g 194 (357)
T 3nur_A 155 GFKGALIMGRAQDGFLDQDKYDIIFKTAENLDVPIYLHPA 194 (357)
T ss_dssp CCCCEEEESCBTTBCTTSGGGHHHHHHHHHHTCCEEEECC
T ss_pred CceEEEeCCCCCCCCCCCccHHHHHHHHHhcCCeEEEecC
Confidence 999998875432 235667888899998887 79988753
No 332
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=77.15 E-value=9 Score=35.27 Aligned_cols=113 Identities=13% Similarity=0.140 Sum_probs=81.0
Q ss_pred EeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEcc-Cc----ccc--cCCCHHHHHHHHHHHHHHhCCCcEEEEec--
Q 018443 61 TAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGG-TT----GEG--QLMSWDEHIMLIGHTVNCFGASVKVIGNT-- 131 (356)
Q Consensus 61 ~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~G-st----GE~--~~Lt~eEr~~li~~~~~~~~grvpVi~gv-- 131 (356)
..++|.+|. ...++++ +.|++.+++.| +. |-- -.+|.+|....++.+.+.++ +||++=.
T Consensus 18 i~~~~a~D~-------~sA~~~~---~aG~~ai~vsg~s~a~~~G~pD~~~vt~~em~~~~~~I~~~~~--~pviaD~d~ 85 (275)
T 2ze3_A 18 FLLPNAWDV-------ASARLLE---AAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRAVA--IPVNADIEA 85 (275)
T ss_dssp EEECEESSH-------HHHHHHH---HHTCSCEEECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHHHCS--SCEEEECTT
T ss_pred eeEecccCH-------HHHHHHH---HcCCCEEEECcHHHHHhCCCCCCCCCCHHHHHHHHHHHHhhcC--CCEEeecCC
Confidence 456777762 3344444 46999999986 23 322 35899999999999988774 6999843
Q ss_pred C-CCCHHHHHHHHHHHHHcCCCEEEEcCCCC--C--CCCHHHHHHHHHHHHhc-----CCeEEE
Q 018443 132 G-SNSTREAIHATEQGFAVGMHAALHINPYY--G--KTSLEGLISHFDSVLSM-----GPTIIY 185 (356)
Q Consensus 132 g-~~st~~ai~lar~a~~~Gadavlv~pP~y--~--~~s~~~l~~y~~~va~~-----~PiilY 185 (356)
| +.+..++.+.++...++|+++|-+---.+ . -.+.++..+-.+++.++ .|+++.
T Consensus 86 Gyg~~~~~~~~~v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~ 149 (275)
T 2ze3_A 86 GYGHAPEDVRRTVEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLN 149 (275)
T ss_dssp CSSSSHHHHHHHHHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEE
Confidence 3 23789999999999999999998864322 1 14677888888888765 476665
No 333
>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp}
Probab=77.11 E-value=15 Score=35.82 Aligned_cols=109 Identities=10% Similarity=-0.017 Sum_probs=67.8
Q ss_pred HHHHHHHHHHCCCCEEEEccCcc----cccCCCHHHHHHHH----HHHHHHhC-----CCcEEEEecCCCCHHHHHHHHH
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTG----EGQLMSWDEHIMLI----GHTVNCFG-----ASVKVIGNTGSNSTREAIHATE 144 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstG----E~~~Lt~eEr~~li----~~~~~~~~-----grvpVi~gvg~~st~~ai~lar 144 (356)
.+..++.+-+.||+.-++..+.+ +......++...++ +.+++.+. +|.--++.+.-...+.+++..+
T Consensus 103 ~e~rl~~MD~~GId~~Vl~p~~~~~~~~~~~~d~e~a~~~~r~~Nd~lae~~~~~~P~~Rf~g~a~v~~~d~~~a~~EL~ 182 (423)
T 4dzi_A 103 RDARIAVMDEQDIETAFMLPTFGCGVEEALKHDIEATMASVHAFNLWLDEDWGFDRPDHRIIAAPIVSLADPTRAVEEVD 182 (423)
T ss_dssp HHHHHHHHHHHTEEEEEEECSGGGGHHHHTTTCHHHHHHHHHHHHHHHHHHTCSSCTTCCEEECCBCCCSSHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcEEEECCCchhhccccccCCHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEEeCCccCHHHHHHHHH
Confidence 44556666677999766665542 22234445444443 33344443 4532233333335888999999
Q ss_pred HHHHcCCCEEEEcCC----CC--CCCCHHHHHHHHHHHHhc-CCeEEEe
Q 018443 145 QGFAVGMHAALHINP----YY--GKTSLEGLISHFDSVLSM-GPTIIYN 186 (356)
Q Consensus 145 ~a~~~Gadavlv~pP----~y--~~~s~~~l~~y~~~va~~-~PiilYn 186 (356)
++.+.|+.++.+.|- .+ ..++++.+...|+.+.+. .||+++-
T Consensus 183 r~~~~G~~Gv~l~p~~~~~~~g~~~l~d~~~~pl~~~~~elg~pV~iH~ 231 (423)
T 4dzi_A 183 FVLARGAKLVLVRPAPVPGLVKPRSLGDRSHDPVWARLAEAGVPVGFHL 231 (423)
T ss_dssp HHHHTTCSCEECCSSCBCCSSSCBCTTCGGGHHHHHHHHHHTCCEEEEC
T ss_pred HHHHcCCeEEEEecCCCCCCCCCCCCCCccHHHHHHHHHhcCCeEEEeC
Confidence 999999999987531 11 124567888899998887 7988874
No 334
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=77.09 E-value=2.7 Score=39.26 Aligned_cols=120 Identities=17% Similarity=0.220 Sum_probs=61.2
Q ss_pred ccCceeEeeecccCCCCC-CCHHHHHHHHHHHHHCCCCEEEEcc-Ccccc-cCCC-HHHHHHHHHHHHHHhCCCcEEEEe
Q 018443 55 KALRLITAIKTPYLPDGR-FDLEAYDDLVNMQIVNGAEGMIVGG-TTGEG-QLMS-WDEHIMLIGHTVNCFGASVKVIGN 130 (356)
Q Consensus 55 ~~~Gvi~al~TPf~~dg~-ID~~~l~~~v~~li~~Gv~Gl~v~G-stGE~-~~Lt-~eEr~~li~~~~~~~~grvpVi~g 130 (356)
...||+-..+=-|.+.|+ .|.+...++.+.+++.|++-|=++| ||.-+ ...+ .||..+++..+....+.++|+.+=
T Consensus 30 ~iMGIlNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~vpiSID 109 (294)
T 2dqw_A 30 RLLGVLNLTPDSFSDGGRYLDPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGVPVSVD 109 (294)
T ss_dssp EEEEEEECCC-------------CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCSCEEEE
T ss_pred eEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 356777654444887776 4899999999999999999999998 55332 2233 456666665554444336676554
Q ss_pred cCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018443 131 TGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNV 187 (356)
Q Consensus 131 vg~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~ 187 (356)
+.. . +-++.|-++|++-|--+ ... ..+++ +.-+++. .|+++-+.
T Consensus 110 T~~--~----~Va~aAl~aGa~iINdV---sg~-~d~~m---~~v~a~~~~~vVlmh~ 154 (294)
T 2dqw_A 110 TRK--P----EVAEEALKLGAHLLNDV---TGL-RDERM---VALAARHGVAAVVMHM 154 (294)
T ss_dssp CSC--H----HHHHHHHHHTCSEEECS---SCS-CCHHH---HHHHHHHTCEEEEECC
T ss_pred CCC--H----HHHHHHHHhCCCEEEEC---CCC-CChHH---HHHHHHhCCCEEEEcC
Confidence 433 2 23344455588844333 222 33333 4444554 68887765
No 335
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=76.92 E-value=5.3 Score=35.57 Aligned_cols=74 Identities=14% Similarity=0.125 Sum_probs=47.7
Q ss_pred HHHHHHHHHHCCCCEEEEccCcccc--cCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEE
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEG--QLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAAL 155 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~--~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavl 155 (356)
..++++.+.+.|++.|.+..-++.+ ..-. .++++.+.+.+ ++||+++=+-.+.++ ++.+.+.|||+|+
T Consensus 37 ~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~----~~~i~~i~~~~--~ipvi~~Ggi~~~~~----~~~~l~~Gad~V~ 106 (247)
T 3tdn_A 37 LRDWVVEVEKRGAGEILLTSIDRDGTKSGYD----TEMIRFVRPLT--TLPIIASGGAGKMEH----FLEAFLRGADKVS 106 (247)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTCSSCCC----HHHHHHHGGGC--CSCEEEESCCCSHHH----HHHHHHTTCSEEC
T ss_pred HHHHHHHHHHcCCCEEEEEecCcccCCCccc----HHHHHHHHHhC--CCCEEEeCCCCCHHH----HHHHHHcCCCeee
Confidence 3457777788999999876543322 2112 34555555544 689998876665544 4445568999999
Q ss_pred EcCCCC
Q 018443 156 HINPYY 161 (356)
Q Consensus 156 v~pP~y 161 (356)
+.....
T Consensus 107 ig~~~l 112 (247)
T 3tdn_A 107 INTAAV 112 (247)
T ss_dssp CSHHHH
T ss_pred hhhHHh
Confidence 876544
No 336
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=76.91 E-value=16 Score=36.51 Aligned_cols=76 Identities=17% Similarity=0.229 Sum_probs=44.7
Q ss_pred HHHHHHCCCCEEEEccCcccccCCCHHH-------HHHHHHHHHHHhC-CCcEEEEecCCCCHHHHHHHHHHHHHcCCCE
Q 018443 82 VNMQIVNGAEGMIVGGTTGEGQLMSWDE-------HIMLIGHTVNCFG-ASVKVIGNTGSNSTREAIHATEQGFAVGMHA 153 (356)
Q Consensus 82 v~~li~~Gv~Gl~v~GstGE~~~Lt~eE-------r~~li~~~~~~~~-grvpVi~gvg~~st~~ai~lar~a~~~Gada 153 (356)
.+.+++.|+++|.+....|. ..+..+ -...+..+.+.++ -++|||+.=|-.+..+..+ |.++|||+
T Consensus 311 a~~~~~aGad~i~vg~g~gs--i~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~k----ala~GA~~ 384 (511)
T 3usb_A 311 TKALIEAGANVVKVGIGPGS--ICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVK----ALAAGAHV 384 (511)
T ss_dssp HHHHHHHTCSEEEECSSCST--TCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHH----HHHTTCSE
T ss_pred HHHHHHhCCCEEEECCCCcc--ccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHH----HHHhCchh
Confidence 45677889999998443333 122211 1223333333332 2699998544445555443 45689999
Q ss_pred EEEcCCCCCC
Q 018443 154 ALHINPYYGK 163 (356)
Q Consensus 154 vlv~pP~y~~ 163 (356)
|++-.++...
T Consensus 385 V~vGs~~~~~ 394 (511)
T 3usb_A 385 VMLGSMFAGV 394 (511)
T ss_dssp EEESTTTTTB
T ss_pred heecHHHhcC
Confidence 9999876543
No 337
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=76.56 E-value=4.5 Score=38.91 Aligned_cols=76 Identities=21% Similarity=0.284 Sum_probs=43.6
Q ss_pred HHHHHHCCCCEEEEccCcc---c---ccCCCHHHHH-HHHHHHH---HHhCCC-cEEEEecCCCCHHHHHHHHHHHHHcC
Q 018443 82 VNMQIVNGAEGMIVGGTTG---E---GQLMSWDEHI-MLIGHTV---NCFGAS-VKVIGNTGSNSTREAIHATEQGFAVG 150 (356)
Q Consensus 82 v~~li~~Gv~Gl~v~GstG---E---~~~Lt~eEr~-~li~~~~---~~~~gr-vpVi~gvg~~st~~ai~lar~a~~~G 150 (356)
++.+++.|+++|.+ |+.| . .+-.+..+-. ++.+... ..++++ +|||+.=|=.+..++.+ |..+|
T Consensus 225 a~~~~~~Gad~i~v-g~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~k----alalG 299 (393)
T 2qr6_A 225 ALHMMRTGAVGIIV-GGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVK----AIACG 299 (393)
T ss_dssp HHHHHTTTCSEEEE-SCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHH----HHHHT
T ss_pred HHHHHHcCCCEEEE-CCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHH----HHHcC
Confidence 55667899999998 6533 2 1113332222 2222211 115555 99997444444555443 34579
Q ss_pred CCEEEEcCCCCC
Q 018443 151 MHAALHINPYYG 162 (356)
Q Consensus 151 adavlv~pP~y~ 162 (356)
||+|++-.|+..
T Consensus 300 A~~V~iG~~~l~ 311 (393)
T 2qr6_A 300 ADAVVLGSPLAR 311 (393)
T ss_dssp CSEEEECGGGGG
T ss_pred CCEEEECHHHHc
Confidence 999999988653
No 338
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=76.54 E-value=9.6 Score=33.61 Aligned_cols=130 Identities=10% Similarity=0.055 Sum_probs=72.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEE-ec----------CCCCHHHHHHH
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG-NT----------GSNSTREAIHA 142 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~-gv----------g~~st~~ai~l 142 (356)
|.+...+.++.+++.+++|+++.+... + ..++.+ ...++||+. +. +....+-.-..
T Consensus 48 ~~~~~~~~~~~l~~~~vdgiIi~~~~~-------~---~~~~~l---~~~~iPvV~i~~~~~~~~~~~V~~D~~~~g~~a 114 (276)
T 3jy6_A 48 DIEREKTLLRAIGSRGFDGLILQSFSN-------P---QTVQEI---LHQQMPVVSVDREMDACPWPQVVTDNFEAAKAA 114 (276)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEESSCC-------H---HHHHHH---HTTSSCEEEESCCCTTCSSCEEECCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCEEEEecCCc-------H---HHHHHH---HHCCCCEEEEecccCCCCCCEEEEChHHHHHHH
Confidence 567778899999999999999987653 2 223322 234677653 32 22345566677
Q ss_pred HHHHHHcCCCEEEEcCCCCC-CCCHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHH-HHHhcCCCEEEEeecCch
Q 018443 143 TEQGFAVGMHAALHINPYYG-KTSLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVI-HTMAQSPNLAGVKECVGN 218 (356)
Q Consensus 143 ar~a~~~Gadavlv~pP~y~-~~s~~~l~~y~~~va~~~PiilYn~P~~tG~~ls~~~l-~~La~~pnivGiK~s~~d 218 (356)
+++..+.|..-+.++..... ..+..+-.+-|++..+..|.++.......... ..+.+ ..|.+.|.+-+|=-. +|
T Consensus 115 ~~~L~~~G~~~I~~i~~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~ai~~~-~d 190 (276)
T 3jy6_A 115 TTAFRQQGYQHVVVLTSELELSRTRQERYRGILAAAQDVDVLEVSESSYNHSE-VHQRLTQLITQNDQKTVAFAL-KE 190 (276)
T ss_dssp HHHHHTTTCCEEEEEEECSTTCHHHHHHHHHHHTTCSEEEEEEECSSSCCHHH-HHHHHHHHHHSSSSCEEEEES-SH
T ss_pred HHHHHHcCCCeEEEEecCCCCCchHHHHHHHHHHHHHhCCcEEEeccccCCcH-HHHHHHHHHhcCCCCcEEEEe-Cc
Confidence 78888899988766654332 22223444444444444354444322111111 22233 334457888777544 44
No 339
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=76.52 E-value=14 Score=33.68 Aligned_cols=118 Identities=16% Similarity=0.052 Sum_probs=76.4
Q ss_pred eeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhC---CCcEEEEecCCCC
Q 018443 59 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFG---ASVKVIGNTGSNS 135 (356)
Q Consensus 59 vi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~---grvpVi~gvg~~s 135 (356)
+-.+.++-| +.|.-..+.-..-++.-++.|++-|=+.-.-|..-+=.+++-.+-+..+++.+. .-++||.-++..+
T Consensus 69 v~v~tVigF-P~G~~~~~~Kv~E~~~Av~~GAdEIDmVinig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~ 147 (260)
T 1p1x_A 69 IRIATVTNF-PHGNDDIDIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELK 147 (260)
T ss_dssp SEEEEEEST-TTCCSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHC
T ss_pred ceEEEEeCC-CCCCCcHHHHHHHHHHHHHcCCCEEEEeccHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCC
Confidence 445555677 467788888888899999999999855555554433334555555555555543 2356788777766
Q ss_pred HHH-HHHHHHHHHHcCCCEEEEcCCCC-CCCCHHHHHHHHHHHH
Q 018443 136 TRE-AIHATEQGFAVGMHAALHINPYY-GKTSLEGLISHFDSVL 177 (356)
Q Consensus 136 t~~-ai~lar~a~~~Gadavlv~pP~y-~~~s~~~l~~y~~~va 177 (356)
.+| ....++.+.++|||.|=...=|. ...|.+.+.-.-+.|.
T Consensus 148 d~e~i~~a~~ia~eaGADfVKTSTGf~~~gAt~e~v~lm~~~I~ 191 (260)
T 1p1x_A 148 DEALIRKASEISIKAGADFIKTSTGKVAVNATPESARIMMEVIR 191 (260)
T ss_dssp SHHHHHHHHHHHHHTTCSEEECCCSCSSCCCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHHH
Confidence 667 45888889999999887665443 3345555444433333
No 340
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=76.51 E-value=6.3 Score=36.17 Aligned_cols=83 Identities=14% Similarity=0.045 Sum_probs=50.9
Q ss_pred HHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCC
Q 018443 84 MQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGK 163 (356)
Q Consensus 84 ~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~~ 163 (356)
...+.|++-+-+++.....+..+.+. ++.+++.+..++||++.-|=.+.++ ++.+.++|+|++++.--.+..
T Consensus 177 ~A~~~Gad~IGv~~r~l~~~~~dl~~----~~~l~~~v~~~~pvVaegGI~t~ed----v~~l~~~GadgvlVGsal~~a 248 (272)
T 3qja_A 177 RALKAGAKVIGVNARDLMTLDVDRDC----FARIAPGLPSSVIRIAESGVRGTAD----LLAYAGAGADAVLVGEGLVTS 248 (272)
T ss_dssp HHHHHTCSEEEEESBCTTTCCBCTTH----HHHHGGGSCTTSEEEEESCCCSHHH----HHHHHHTTCSEEEECHHHHTC
T ss_pred HHHHCCCCEEEECCCcccccccCHHH----HHHHHHhCcccCEEEEECCCCCHHH----HHHHHHcCCCEEEEcHHHhCC
Confidence 33456888887776544333333333 2333444555789888655444444 345577899999998777766
Q ss_pred CCHHHHHHHHH
Q 018443 164 TSLEGLISHFD 174 (356)
Q Consensus 164 ~s~~~l~~y~~ 174 (356)
.+..+..+.|.
T Consensus 249 ~dp~~~~~~l~ 259 (272)
T 3qja_A 249 GDPRAAVADLV 259 (272)
T ss_dssp SCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 66666555444
No 341
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=76.48 E-value=35 Score=30.01 Aligned_cols=131 Identities=9% Similarity=0.040 Sum_probs=72.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEE-e-----------cCCCCHHHHH
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG-N-----------TGSNSTREAI 140 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~-g-----------vg~~st~~ai 140 (356)
-|.+...+.++.+++.+++||++.+...+. -...++.+.+. ++||+. + |+....+-.-
T Consensus 53 ~~~~~~~~~i~~l~~~~vdgiii~~~~~~~-------~~~~~~~~~~~---~iPvV~~~~~~~~~~~~~~V~~D~~~~g~ 122 (304)
T 3gbv_A 53 YDYNSFVATSQAVIEEQPDGVMFAPTVPQY-------TKGFTDALNEL---GIPYIYIDSQIKDAPPLAFFGQNSHQSGY 122 (304)
T ss_dssp SCHHHHHHHHHHHHTTCCSEEEECCSSGGG-------THHHHHHHHHH---TCCEEEESSCCTTSCCSEEEECCHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEEECCCChHH-------HHHHHHHHHHC---CCeEEEEeCCCCCCCceEEEecChHHHHH
Confidence 577888899999999999999998875432 12233333321 456543 2 2233455566
Q ss_pred HHHHHHHHcCC--CEEEEcC-----CCCCCCCHHHHHHHHHHHHhc-CC---eEEEeCCCCCCCCCCHHHHHHHh-cCCC
Q 018443 141 HATEQGFAVGM--HAALHIN-----PYYGKTSLEGLISHFDSVLSM-GP---TIIYNVPSRTGQDIPPRVIHTMA-QSPN 208 (356)
Q Consensus 141 ~lar~a~~~Ga--davlv~p-----P~y~~~s~~~l~~y~~~va~~-~P---iilYn~P~~tG~~ls~~~l~~La-~~pn 208 (356)
..+++..+.|. .-+.++. |.......+-...|.+.+.+. .+ +.++... ....-..+.+.++. +.|.
T Consensus 123 ~a~~~l~~~g~~~~~i~~i~~~~~g~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~ 200 (304)
T 3gbv_A 123 FAARMLMLLAVNDREIVIFRKIHEGVIGSNQQESREIGFRQYMQEHHPACNILELNLHA--DLNIEDSRMLDDFFREHPD 200 (304)
T ss_dssp HHHHHHHHHSTTCSEEEEEEEEBTTBCCCHHHHHHHHHHHHHHHHHCTTSEEEEEEEES--SCSSCHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHhCCCCeEEEEEecccCCccchhHHHHHHHHHHHHHhhCCCcEEEEeeecC--CCHHHHHHHHHHHHHhCCC
Confidence 67788888887 6666653 222222334445555555554 32 2222211 11222346666665 5676
Q ss_pred EEEEeec
Q 018443 209 LAGVKEC 215 (356)
Q Consensus 209 ivGiK~s 215 (356)
+.+|=-.
T Consensus 201 ~~ai~~~ 207 (304)
T 3gbv_A 201 VKHGITF 207 (304)
T ss_dssp CCEEEES
T ss_pred eEEEEEc
Confidence 6666543
No 342
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=76.42 E-value=36 Score=30.28 Aligned_cols=119 Identities=12% Similarity=0.029 Sum_probs=76.0
Q ss_pred eeEeeecccC--CCC--CCCHHHHHHHHHHHHHC-CCCEEEEccCcccccCC-CHHHHHHHHHHHHHHhCCCcEEEEec-
Q 018443 59 LITAIKTPYL--PDG--RFDLEAYDDLVNMQIVN-GAEGMIVGGTTGEGQLM-SWDEHIMLIGHTVNCFGASVKVIGNT- 131 (356)
Q Consensus 59 vi~al~TPf~--~dg--~ID~~~l~~~v~~li~~-Gv~Gl~v~GstGE~~~L-t~eEr~~li~~~~~~~~grvpVi~gv- 131 (356)
-+|.++|--+ +.| +.+.+...++++..++. +++-+=+ |.... ..+...++++.+. .++++||+.-
T Consensus 62 ~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~~~~d~iDv-----El~~~~~~~~~~~l~~~~~---~~~~kvI~S~H 133 (238)
T 1sfl_A 62 SFKLLVTYRTKLQGGYGQFTNDSYLNLISDLANINGIDMIDI-----EWQADIDIEKHQRIITHLQ---QYNKEVIISHH 133 (238)
T ss_dssp CSEEEEECCBGGGTSCBCCCHHHHHHHHHHGGGCTTCCEEEE-----ECCTTSCHHHHHHHHHHHH---HTTCEEEEEEE
T ss_pred CCCEEEEeeccccCCCCCCCHHHHHHHHHHHHHhCCCCEEEE-----EccCCCChHHHHHHHHHHH---hcCCEEEEEec
Confidence 3466666543 334 47888888999988887 5888766 54432 4444555655443 3467888864
Q ss_pred ---CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHh-----cCCeEEEeCC
Q 018443 132 ---GSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLS-----MGPTIIYNVP 188 (356)
Q Consensus 132 ---g~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~-----~~PiilYn~P 188 (356)
+..+.++.+++.+++++.|||-+=+.... .+.++..+-++...+ ..|++.|+.-
T Consensus 134 df~~tp~~~el~~~~~~~~~~gaDivKia~~a---~~~~D~l~ll~~~~~~~~~~~~P~I~~~MG 195 (238)
T 1sfl_A 134 NFESTPPLDELQFIFFKMQKFNPEYVKLAVMP---HNKNDVLNLLQAMSTFSDTMDCKVVGISMS 195 (238)
T ss_dssp ESSCCCCHHHHHHHHHHHHTTCCSEEEEEECC---SSHHHHHHHHHHHHHHHHHCSSEEEEEECT
T ss_pred CCCCCcCHHHHHHHHHHHHHcCCCEEEEEecC---CCHHHHHHHHHHHHHHhhcCCCCEEEEECC
Confidence 34567889999999999999987433222 245555544443322 2589999853
No 343
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=76.41 E-value=36 Score=32.22 Aligned_cols=121 Identities=8% Similarity=-0.082 Sum_probs=87.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHHHHHHHHHHcCCC
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGMH 152 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai~lar~a~~~Gad 152 (356)
|.+.+.+.+...++.|.+++=+-...+ +.++=.+.++.+.+.++.++++.+-+ ++.+.++++++++..+ .|+
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~iKik~g~~-----~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~-~~i- 217 (378)
T 2qdd_A 145 TPDQMLGLIAEAAAQGYRTHSAKIGGS-----DPAQDIARIEAISAGLPDGHRVTFDVNRAWTPAIAVEVLNSVR-ARD- 217 (378)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSS-----CHHHHHHHHHHHHHSCCTTCEEEEECTTCCCHHHHHHHHTSCC-CCC-
T ss_pred CHHHHHHHHHHHHHHhhhheeecCCCC-----ChHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHhC-CCc-
Confidence 668888888888899999986644332 45666788888888887788988765 4558899999999987 766
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh--cCCCEEEEeecC
Q 018443 153 AALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA--QSPNLAGVKECV 216 (356)
Q Consensus 153 avlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La--~~pnivGiK~s~ 216 (356)
++--|+. + .+.++++.+. .||+.=. .-.+++.++++. ..-+++-+|-+-
T Consensus 218 --~iEqP~~---d----~~~~~~l~~~~~iPI~~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~ 270 (378)
T 2qdd_A 218 --WIEQPCQ---T----LDQCAHVARRVANPIMLDE------CLHEFSDHLAAWSRGACEGVKIKPNR 270 (378)
T ss_dssp --EEECCSS---S----HHHHHHHHTTCCSCEEECT------TCCSHHHHHHHHHHTCCSEEEECHHH
T ss_pred --EEEcCCC---C----HHHHHHHHHhCCCCEEECC------CcCCHHHHHHHHHhCCCCEEEecccc
Confidence 5566643 2 4556777765 5766532 234678888877 357899999754
No 344
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=76.37 E-value=43 Score=31.68 Aligned_cols=119 Identities=12% Similarity=-0.068 Sum_probs=76.4
Q ss_pred HHHHHHHHCCCCEEEEccCcccc----------------------cCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHH
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGEG----------------------QLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTR 137 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE~----------------------~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~ 137 (356)
..++.+.+.|..++.+-+.|-|- .+...++..+-++...+ ...+.||++++++.+.+
T Consensus 63 e~~~~~~~~G~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~n~G~~~~~~~l~~~~~-~~~~~pvivsI~g~~~~ 141 (345)
T 3oix_A 63 EELAAIDHSEAGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLPNLGINYYLDYVTELQK-QPDSKNHFLSLVGMSPE 141 (345)
T ss_dssp HHHHHHHTSSCSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCCBSCHHHHHHHHHHHHH-STTCCCCEEEECCSSHH
T ss_pred HHHHHHHHcCCCeEEeeeecCCCCCCCCCCcEEecccchhccCCCCChhHHHHHHHHHHHhh-ccCCCCEEEEecCCCHH
Confidence 34455667787666544444331 12335555554444322 12367999999999999
Q ss_pred HHHHHHHHHHHcCCC-EEEE--cCCCCC-----CCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh
Q 018443 138 EAIHATEQGFAVGMH-AALH--INPYYG-----KTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA 204 (356)
Q Consensus 138 ~ai~lar~a~~~Gad-avlv--~pP~y~-----~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La 204 (356)
+-++.++.+++.|++ ++-+ ..|.-. ..+.+.+.+..++|.++ .||++==-|. ++.+.+.+++
T Consensus 142 d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~vKi~p~-----~~~~~~a~~~ 213 (345)
T 3oix_A 142 ETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLGIKLPPY-----FDIVHFDQAA 213 (345)
T ss_dssp HHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCC-----CCHHHHHHHH
T ss_pred HHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeEEEECCC-----CCHHHHHHHH
Confidence 999999999999987 6543 223221 13557788888888776 6988877663 4666666665
No 345
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=76.26 E-value=9.5 Score=35.30 Aligned_cols=117 Identities=13% Similarity=-0.002 Sum_probs=75.5
Q ss_pred eeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHH---HHHHHHHHHHHHhCC-CcEEEEecCCC
Q 018443 59 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWD---EHIMLIGHTVNCFGA-SVKVIGNTGSN 134 (356)
Q Consensus 59 vi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~e---Er~~li~~~~~~~~g-rvpVi~gvg~~ 134 (356)
+-.+.++-| +.|.-..+.-..-++.-++.|++-|=+.-.-|..-+=.++ +-.+-+..+++.+++ -++||.-++..
T Consensus 90 v~v~tVigF-P~G~~~~~~Kv~E~~~Av~~GAdEIDmVinig~lksg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L 168 (281)
T 2a4a_A 90 PKIACVINF-PYGTDSMEKVLNDTEKALDDGADEIDLVINYKKIIENTDEGLKEATKLTQSVKKLLTNKILKVIIEVGEL 168 (281)
T ss_dssp SEEEEEEST-TTCCSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHHSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHHHH
T ss_pred ceEEEEeCC-CCCCCCHHHHHHHHHHHHHcCCCEEEEecchHhhhCCChhHHHHHHHHHHHHHHHhcCCceEEEEecccC
Confidence 444555677 4677888888888899999999988655555543322334 444445555554433 24568877776
Q ss_pred CHHH-HHHHHHHHHHcCCCEEEEcCCCC-CCCCHHHHHHHHHHH
Q 018443 135 STRE-AIHATEQGFAVGMHAALHINPYY-GKTSLEGLISHFDSV 176 (356)
Q Consensus 135 st~~-ai~lar~a~~~Gadavlv~pP~y-~~~s~~~l~~y~~~v 176 (356)
+.+| ....++.+.++|||.|=...=|. ...|.+.+.-.-+.+
T Consensus 169 ~d~e~i~~A~~ia~eaGADfVKTSTGf~~~gAT~edv~lm~~~v 212 (281)
T 2a4a_A 169 KTEDLIIKTTLAVLNGNADFIKTSTGKVQINATPSSVEYIIKAI 212 (281)
T ss_dssp CSHHHHHHHHHHHHTTTCSEEECCCSCSSCCCCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHH
Confidence 6667 45788888999999887765444 345666655444444
No 346
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=76.25 E-value=4.9 Score=35.00 Aligned_cols=58 Identities=16% Similarity=0.167 Sum_probs=33.7
Q ss_pred HHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC
Q 018443 82 VNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN 158 (356)
Q Consensus 82 v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~p 158 (356)
++...+.|++++.+ |..-+ . +..+.+..+. +++|++..+..+ ++.+.+.|+|.+++.+
T Consensus 87 ~~~a~~~gad~v~l-~~~~~----~-------~~~~~~~~g~---~~~~~s~~t~~e----~~~a~~~g~d~v~~~~ 144 (227)
T 2tps_A 87 VELALNLKADGIHI-GQEDA----N-------AKEVRAAIGD---MILGVSAHTMSE----VKQAEEDGADYVGLGP 144 (227)
T ss_dssp HHHHHHHTCSEEEE-CTTSS----C-------HHHHHHHHTT---SEEEEEECSHHH----HHHHHHHTCSEEEECC
T ss_pred HHHHHHcCCCEEEE-CCCcc----C-------HHHHHHhcCC---cEEEEecCCHHH----HHHHHhCCCCEEEECC
Confidence 34556779999976 43321 2 1222232322 466765555655 4556678999999854
No 347
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=76.21 E-value=3.1 Score=36.81 Aligned_cols=86 Identities=17% Similarity=0.246 Sum_probs=52.9
Q ss_pred HHHHHHHHHHCCCCEEEEccCccccc--CCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHc---CCC
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQ--LMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAV---GMH 152 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~--~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~---Gad 152 (356)
....++.+.+.|++.+++.+.+-++. ....+ +++.+.+. -++||++.=|-.+.++..++ .+. |+|
T Consensus 151 ~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~----~~~~l~~~--~~ipvia~GGI~~~~d~~~~----~~~~~~Gad 220 (244)
T 2y88_A 151 LWDVLERLDSEGCSRFVVTDITKDGTLGGPNLD----LLAGVADR--TDAPVIASGGVSSLDDLRAI----ATLTHRGVE 220 (244)
T ss_dssp HHHHHHHHHHTTCCCEEEEETTTTTTTSCCCHH----HHHHHHTT--CSSCEEEESCCCSHHHHHHH----HTTGGGTEE
T ss_pred HHHHHHHHHhCCCCEEEEEecCCccccCCCCHH----HHHHHHHh--CCCCEEEECCCCCHHHHHHH----HhhccCCCC
Confidence 45566777788999999877553332 23433 33333333 27899986444445555443 344 999
Q ss_pred EEEEcCCCCCCC-CHHHHHHHH
Q 018443 153 AALHINPYYGKT-SLEGLISHF 173 (356)
Q Consensus 153 avlv~pP~y~~~-s~~~l~~y~ 173 (356)
++++..-.|..+ +.+++.+|.
T Consensus 221 ~v~vG~al~~~~~~~~~~~~~~ 242 (244)
T 2y88_A 221 GAIVGKALYARRFTLPQALAAV 242 (244)
T ss_dssp EEEECHHHHTTSSCHHHHHHHT
T ss_pred EEEEcHHHHCCCcCHHHHHHHh
Confidence 999987666443 566666653
No 348
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=76.12 E-value=24 Score=33.02 Aligned_cols=76 Identities=14% Similarity=0.008 Sum_probs=43.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccc-ccCC-CHHH---HHHHHHHHHHHhCCCcEEEE-ecCC-CCHHHHHHHHHHH
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGE-GQLM-SWDE---HIMLIGHTVNCFGASVKVIG-NTGS-NSTREAIHATEQG 146 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE-~~~L-t~eE---r~~li~~~~~~~~grvpVi~-gvg~-~st~~ai~lar~a 146 (356)
+.+.+.+. +...|+++|-++.+... +..- ...+ -.++++.+.+.+ ++||++ +++. .+ .+.++.+
T Consensus 128 ~~~~~~~~---~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~--~~Pv~vK~~~~~~~----~~~a~~a 198 (349)
T 1p0k_A 128 TAAQAKEA---VEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRV--SVPVIVKEVGFGMS----KASAGKL 198 (349)
T ss_dssp CHHHHHHH---HHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHC--SSCEEEEEESSCCC----HHHHHHH
T ss_pred CHHHHHHH---HHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHc--CCCEEEEecCCCCC----HHHHHHH
Confidence 44444443 33579999977765421 1100 0111 345666666655 578877 3322 23 4567888
Q ss_pred HHcCCCEEEEcC
Q 018443 147 FAVGMHAALHIN 158 (356)
Q Consensus 147 ~~~Gadavlv~p 158 (356)
.++|+|++.+..
T Consensus 199 ~~~Gad~I~v~~ 210 (349)
T 1p0k_A 199 YEAGAAAVDIGG 210 (349)
T ss_dssp HHHTCSEEEEEC
T ss_pred HHcCCCEEEEcC
Confidence 999999999974
No 349
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=76.10 E-value=21 Score=34.04 Aligned_cols=106 Identities=14% Similarity=0.111 Sum_probs=65.0
Q ss_pred HHHHHHHCCCCEEEEccC-cccccCCCHHHHHHHHHH-------HHHHhCCCcEEEEecCCCCHHHHHHHHHHHHH-cCC
Q 018443 81 LVNMQIVNGAEGMIVGGT-TGEGQLMSWDEHIMLIGH-------TVNCFGASVKVIGNTGSNSTREAIHATEQGFA-VGM 151 (356)
Q Consensus 81 ~v~~li~~Gv~Gl~v~Gs-tGE~~~Lt~eEr~~li~~-------~~~~~~grvpVi~gvg~~st~~ai~lar~a~~-~Ga 151 (356)
.++.+-+.||+.-++..+ -|-....+.++...+.+. +++...+|.--++.+.-...+++++..+++.+ .|+
T Consensus 95 rl~~MD~~GId~~Vl~~~~pg~~~~~d~~~a~~~~r~~Nd~l~~~~~~~P~Rf~g~a~v~~~~~~~a~~EL~r~~~~~G~ 174 (373)
T 4inf_A 95 RIADMDATGIDKAILALTSPGVQPLHDLDEARTLATRANDTLADACQKYPDRFIGMGTVAPQDPEWSAREIHRGARELGF 174 (373)
T ss_dssp HHHHHHHTTCCEEEEEECTTTTTTCSCHHHHHHHHHHHHHHHHHHHHHSTTTEEECBCCCTTSHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHCCCcEEEEccCCccccccCCHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEecCCCCHHHHHHHHHHHHhhcCc
Confidence 666777899996555433 232113455544443322 22333556444445554456778877777765 599
Q ss_pred CEEEEcCCCC-CCCCHHHHHHHHHHHHhc-CCeEEEe
Q 018443 152 HAALHINPYY-GKTSLEGLISHFDSVLSM-GPTIIYN 186 (356)
Q Consensus 152 davlv~pP~y-~~~s~~~l~~y~~~va~~-~PiilYn 186 (356)
.++.+.+.+- ..++++.+...|+.+.+. .||+++-
T Consensus 175 ~Gv~l~~~~~g~~l~d~~~~pi~~~~~e~g~pV~iH~ 211 (373)
T 4inf_A 175 KGIQINSHTQGRYLDEEFFDPIFRALVEVDQPLYIHP 211 (373)
T ss_dssp CCEEECSCBTTBCTTSGGGHHHHHHHHHHTCCEEECC
T ss_pred eEEEECCCCCCCCCCCcchHHHHHHHHHcCCeEEECC
Confidence 9998654322 235667888899988887 7988874
No 350
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=76.00 E-value=24 Score=33.31 Aligned_cols=124 Identities=13% Similarity=0.073 Sum_probs=88.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHH-HHHHHHHHcCC
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAI-HATEQGFAVGM 151 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai-~lar~a~~~Ga 151 (356)
|.+.+.+.+....+.|.+.+=+-... +.++=.++++.+.+.++.++++.+-+ ++.+.++++ ++++..++.|+
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~iKik~g~------~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~~l~~~~i 214 (369)
T 2p8b_A 141 DPENMAEEAASMIQKGYQSFKMKVGT------NVKEDVKRIEAVRERVGNDIAIRVDVNQGWKNSANTLTALRSLGHLNI 214 (369)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCS------CHHHHHHHHHHHHHHHCTTSEEEEECTTTTBSHHHHHHHHHTSTTSCC
T ss_pred ChHHHHHHHHHHHHcCcCEEEEEeCC------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHHhCCC
Confidence 67778888888899999998654321 46666788888888888888988765 455789999 99999999988
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEEEeecC
Q 018443 152 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV 216 (356)
Q Consensus 152 davlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~--~pnivGiK~s~ 216 (356)
+.+ --|+ .+.+ .+.++++.+. .||+.=. .-.+++.+.++.+ .-+++-+|-+.
T Consensus 215 ~~i--EqP~--~~~d---~~~~~~l~~~~~iPI~~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~ 270 (369)
T 2p8b_A 215 DWI--EQPV--IADD---IDAMAHIRSKTDLPLMIDE------GLKSSREMRQIIKLEAADKVNIKLMK 270 (369)
T ss_dssp SCE--ECCB--CTTC---HHHHHHHHHTCCSCEEEST------TCCSHHHHHHHHHHTCCSEEEECHHH
T ss_pred cEE--ECCC--Cccc---HHHHHHHHHhCCCCEEeCC------CCCCHHHHHHHHHhCCCCEEEeecch
Confidence 854 3443 1211 4556677665 5766532 2356788888874 57899999754
No 351
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=75.89 E-value=18 Score=35.18 Aligned_cols=115 Identities=7% Similarity=-0.062 Sum_probs=72.4
Q ss_pred ceeEeeecccCCC-CCCCHHH----HHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecC
Q 018443 58 RLITAIKTPYLPD-GRFDLEA----YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTG 132 (356)
Q Consensus 58 Gvi~al~TPf~~d-g~ID~~~----l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg 132 (356)
.++...+-|+..- +.++++. ++..++.+++.|||.|++ |.. -+.+|=+.+++.+.+ . .+||++.+.
T Consensus 116 ~~VAGsIGP~g~~l~~~s~eel~~~~~eqi~~L~~~GvDlll~-----ETi-~~~~Eakaa~~a~~~-~--~lPv~iS~T 186 (406)
T 1lt8_A 116 ALVAGGVSQTPSYLSAKSETEVKKVFLQQLEVFMKKNVDFLIA-----EYF-EHVEEAVWAVETLIA-S--GKPVAATMA 186 (406)
T ss_dssp CEEEEEECCCHHHHTTCHHHHHHHHHHHHHHHHHHHTCSEEEE-----CCC-SCHHHHHHHHHHHGG-G--TSCEEEEEC
T ss_pred CEEEEEcCCcccccCCCCHHHHHHHHHHHHHHHhhCCCCEEEE-----ccc-CCHHHHHHHHHHHHH-h--CCcEEEEEE
Confidence 4677777787531 3466655 445677778899999975 322 245666666654433 3 378888653
Q ss_pred C--------CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHh-------cCCeEEEeCC
Q 018443 133 S--------NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLS-------MGPTIIYNVP 188 (356)
Q Consensus 133 ~--------~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~-------~~PiilYn~P 188 (356)
- .++.++ +..+.+.|+++|.+=. ...++.+..+.+.+.+ ..|+++|-|.
T Consensus 187 ~~~~G~l~G~~~~~~---~~~l~~~~~~avGvNC----~~gP~~~~~~l~~l~~~~~~~g~~~pl~vyPNa 250 (406)
T 1lt8_A 187 IGPEGDLHGVPPGEA---AVRLVKAGASIIGVNC----HFDPTISLKTVKLMKEGLEAAQLKAHLMSQPLA 250 (406)
T ss_dssp CBTTBCTTCCCHHHH---HHHHHTTTCSEEEEES----SSCHHHHHHHHHHHHHHHHTTTCCCEEEEECCS
T ss_pred ECCCCCcCCCcHHHH---HHHhhcCCCCEEEecC----CCCHHHHHHHHHHHHHhhhhcCCCccEEEecCC
Confidence 2 234444 4444557899888754 1346778888877764 2589999764
No 352
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=75.83 E-value=3.2 Score=37.55 Aligned_cols=69 Identities=14% Similarity=0.276 Sum_probs=43.9
Q ss_pred cCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCC-CCHHHHHHHHHH
Q 018443 67 YLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGS-NSTREAIHATEQ 145 (356)
Q Consensus 67 f~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~-~st~~ai~lar~ 145 (356)
-++|-+...+. ++.+.++|+|.+.++||.| .|.+.=.++++.+.+ .++|++.=.+. +..
T Consensus 15 gDP~~~~t~~~----~~~l~~~GaD~ielG~S~G----vt~~~~~~~v~~ir~---~~~Pivlm~y~~n~i--------- 74 (240)
T 1viz_A 15 LDPNKDLPDEQ----LEILCESGTDAVIIGGSDG----VTEDNVLRMMSKVRR---FLVPCVLEVSAIEAI--------- 74 (240)
T ss_dssp ECTTSCCCHHH----HHHHHTSCCSEEEECC--------CHHHHHHHHHHHTT---SSSCEEEECSCGGGC---------
T ss_pred eCCCccccHHH----HHHHHHcCCCEEEECCCCC----CCHHHHHHHHHHhhC---cCCCEEEecCccccc---------
Confidence 34444444444 5777889999999999755 366666666666654 37899875555 222
Q ss_pred HHHcCCCEEEEc
Q 018443 146 GFAVGMHAALHI 157 (356)
Q Consensus 146 a~~~Gadavlv~ 157 (356)
..|+|++++.
T Consensus 75 --~~G~dg~iiP 84 (240)
T 1viz_A 75 --VPGFDLYFIP 84 (240)
T ss_dssp --CSCCSEEEEE
T ss_pred --cCCCCEEEEc
Confidence 6799998763
No 353
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=75.69 E-value=11 Score=33.58 Aligned_cols=134 Identities=11% Similarity=0.089 Sum_probs=73.8
Q ss_pred HHHHHHHHHHCCCCEEEEccCccc-ccCCCHHHHHHHHHHHHHHhCCCcEEEEecCC----CC----HHHHHHHHHHHHH
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGE-GQLMSWDEHIMLIGHTVNCFGASVKVIGNTGS----NS----TREAIHATEQGFA 148 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE-~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~----~s----t~~ai~lar~a~~ 148 (356)
+...++...+.|.+||=+.+..+. ...++.++..++-+ ..+..+=++..+..... .. .+...+.++.|++
T Consensus 17 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~-~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~ 95 (286)
T 3dx5_A 17 FTDIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELN-CLKDKTLEITMISDYLDISLSADFEKTIEKCEQLAILANW 95 (286)
T ss_dssp HHHHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHH-HTGGGTCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHH-HHHHcCCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence 566788888999999976542211 11233444444333 33333223333321111 11 2344557778889
Q ss_pred cCCCEEEEcCCCCCC--CCH---HHHHHHHHHHHhc-----CCeEEEeCCCCCCCCCCHHHHHHHhc---CCCEEEEee
Q 018443 149 VGMHAALHINPYYGK--TSL---EGLISHFDSVLSM-----GPTIIYNVPSRTGQDIPPRVIHTMAQ---SPNLAGVKE 214 (356)
Q Consensus 149 ~Gadavlv~pP~y~~--~s~---~~l~~y~~~va~~-----~PiilYn~P~~tG~~ls~~~l~~La~---~pnivGiK~ 214 (356)
+|+..+.+.+..... .++ +.+.+.++.+++. +.+.+-|.|.. ..-+++.+.+|.+ .||+.-.=|
T Consensus 96 lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~--~~~~~~~~~~l~~~~~~~~vg~~~D 172 (286)
T 3dx5_A 96 FKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLETHPNT--LTDTLPSTLELLGEVDHPNLKINLD 172 (286)
T ss_dssp HTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTS--TTSSHHHHHHHHHHHCCTTEEEEEE
T ss_pred hCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEecCCCc--CcCCHHHHHHHHHhcCCCCeEEEec
Confidence 999999887654432 233 3455666666652 46778887642 2235777777763 577644434
No 354
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=75.66 E-value=18 Score=34.18 Aligned_cols=126 Identities=12% Similarity=-0.043 Sum_probs=75.4
Q ss_pred cCceeEee------ecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcc--cccCCCHHHHHHHHHHHHHH-hCCCcE
Q 018443 56 ALRLITAI------KTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTG--EGQLMSWDEHIMLIGHTVNC-FGASVK 126 (356)
Q Consensus 56 ~~Gvi~al------~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstG--E~~~Lt~eEr~~li~~~~~~-~~grvp 126 (356)
-.|+|..+ .|.....++ .-...-+++.++.|+|++-+.-.-| |-..+ .+++.+.++.+.+. -.-.+|
T Consensus 87 ~~GLii~~E~~G~~~~~~gr~p~---~l~~~sve~a~~~GADAVk~lv~~g~d~~~e~-~~~q~~~l~rv~~ec~~~GiP 162 (332)
T 3iv3_A 87 EAGLLLAYEKTGYDANTTSRLPD---CLVDWSIKRLKEAGADAVKFLLYYDVDGDPQV-NVQKQAYIERIGSECQAEDIP 162 (332)
T ss_dssp TCEEEEECBCCCCCTTSSCCCCC---BCTTCCHHHHHHTTCSEEEEEEEECTTSCHHH-HHHHHHHHHHHHHHHHHHTCC
T ss_pred CCcEEEEeccCCCCcCCCCCCCc---cccccCHHHHHHcCCCEEEEEEEcCCCchHHH-HHHHHHHHHHHHHHHHHcCCc
Confidence 46788777 233322221 1122347888899999875544333 11111 12455666666554 445789
Q ss_pred EEE-----ec---CCCC-------HHHHHHHHHHH--HHcCCCEEEEcCCC-------CC----CCCHHHHHHHHHHHHh
Q 018443 127 VIG-----NT---GSNS-------TREAIHATEQG--FAVGMHAALHINPY-------YG----KTSLEGLISHFDSVLS 178 (356)
Q Consensus 127 Vi~-----gv---g~~s-------t~~ai~lar~a--~~~Gadavlv~pP~-------y~----~~s~~~l~~y~~~va~ 178 (356)
+++ +- ...+ .+-..+.+|.+ .+.|+|-+=+--|. |. .+|+++..++|+++.+
T Consensus 163 lllEil~y~~~~~~~~~~~~a~~~p~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~ 242 (332)
T 3iv3_A 163 FFLEILTYDETISNNSSVEFAKVKVHKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEA 242 (332)
T ss_dssp EEEEEEECBTTBSCTTSHHHHTTHHHHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHH
T ss_pred eEEEEeccCCCCCCCcchhhhccCHHHHHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHh
Confidence 776 22 2222 23367777888 67799999876553 11 2488999999999998
Q ss_pred c--CCeEEE
Q 018443 179 M--GPTIIY 185 (356)
Q Consensus 179 ~--~PiilY 185 (356)
+ +|+++=
T Consensus 243 a~~~P~v~l 251 (332)
T 3iv3_A 243 STDLPYIYL 251 (332)
T ss_dssp TCSSCEEEE
T ss_pred cCCCCEEEE
Confidence 7 576654
No 355
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=75.56 E-value=8.1 Score=36.62 Aligned_cols=88 Identities=11% Similarity=0.027 Sum_probs=56.6
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEc-cCcccccCCC--HHHHHHHHHHHHHHhCCCcEEEEecCCC-CHHHHHHHHHH
Q 018443 70 DGRFDLEAYDDLVNMQIVNGAEGMIVG-GTTGEGQLMS--WDEHIMLIGHTVNCFGASVKVIGNTGSN-STREAIHATEQ 145 (356)
Q Consensus 70 dg~ID~~~l~~~v~~li~~Gv~Gl~v~-GstGE~~~Lt--~eEr~~li~~~~~~~~grvpVi~gvg~~-st~~ai~lar~ 145 (356)
++..+.+....+++.+.+.|++.|-+. |.+.+..... ......+++.+.+.+ ++||+++ |.. +.+++ +.
T Consensus 233 ~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~-Ggi~t~e~a----~~ 305 (349)
T 3hgj_A 233 EGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV--GLRTGAV-GLITTPEQA----ET 305 (349)
T ss_dssp TTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH--CCEEEEC-SSCCCHHHH----HH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc--CceEEEE-CCCCCHHHH----HH
Confidence 356888899999999999999999775 4332211111 112334555666655 5788754 543 44443 44
Q ss_pred HHHcC-CCEEEEcCCCCCCC
Q 018443 146 GFAVG-MHAALHINPYYGKT 164 (356)
Q Consensus 146 a~~~G-adavlv~pP~y~~~ 164 (356)
+.+.| +|.|++.-++...|
T Consensus 306 ~l~~G~aD~V~iGR~~lanP 325 (349)
T 3hgj_A 306 LLQAGSADLVLLGRVLLRDP 325 (349)
T ss_dssp HHHTTSCSEEEESTHHHHCT
T ss_pred HHHCCCceEEEecHHHHhCc
Confidence 55567 99999998876544
No 356
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=75.50 E-value=16 Score=31.68 Aligned_cols=75 Identities=12% Similarity=0.079 Sum_probs=46.1
Q ss_pred HHHHHHCCCCEEEEc--cCcccccCCC-HHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC
Q 018443 82 VNMQIVNGAEGMIVG--GTTGEGQLMS-WDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN 158 (356)
Q Consensus 82 v~~li~~Gv~Gl~v~--GstGE~~~Lt-~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~p 158 (356)
+..+.+.|++.+.+. |.|+.....+ .....+.++.+.+.+ ++||++.=|=.+.+++. .+.++|||++++..
T Consensus 132 ~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~--~ipvia~GGI~~~~~~~----~~~~~Gad~v~vG~ 205 (223)
T 1y0e_A 132 AKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSV--DAKVIAEGNVITPDMYK----RVMDLGVHCSVVGG 205 (223)
T ss_dssp HHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHC--CSEEEEESSCCSHHHHH----HHHHTTCSEEEECH
T ss_pred HHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhC--CCCEEEecCCCCHHHHH----HHHHcCCCEEEECh
Confidence 344678999998653 4454443332 344566777777765 58988633322444433 33456999999987
Q ss_pred CCCC
Q 018443 159 PYYG 162 (356)
Q Consensus 159 P~y~ 162 (356)
..|.
T Consensus 206 al~~ 209 (223)
T 1y0e_A 206 AITR 209 (223)
T ss_dssp HHHC
T ss_pred HHcC
Confidence 6443
No 357
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=75.37 E-value=9.7 Score=35.72 Aligned_cols=101 Identities=8% Similarity=-0.043 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHCCCCEEEEccCccc--ccCCCHHHHHHHHHHHHHHhCCCcEEEE-ecCCCCHHHHHHHHHHHHHcCCC
Q 018443 76 EAYDDLVNMQIVNGAEGMIVGGTTGE--GQLMSWDEHIMLIGHTVNCFGASVKVIG-NTGSNSTREAIHATEQGFAVGMH 152 (356)
Q Consensus 76 ~~l~~~v~~li~~Gv~Gl~v~GstGE--~~~Lt~eEr~~li~~~~~~~~grvpVi~-gvg~~st~~ai~lar~a~~~Gad 152 (356)
+...++...+++.|++-|-++|..++ ....|.+|=.++++.+.+.+ ++|+.+ .+| +.+.--+-++.|.++|++
T Consensus 74 ~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~--~vplsI~DT~--~~~~~~~V~eaal~aga~ 149 (310)
T 2h9a_B 74 NDPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAI--DVPLMIIGCG--VEEKDAEIFPVIGEALSG 149 (310)
T ss_dssp TCHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHC--SSCEEEECCS--CHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhC--CceEEEECCC--CCCCCHHHHHHHHHhCCC
Confidence 67888888999999999999984333 33478888888999888865 688877 654 356666778888888987
Q ss_pred ---EEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018443 153 ---AALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNV 187 (356)
Q Consensus 153 ---avlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~ 187 (356)
-+--+.- . +.+++ ...+++. .|+++-+.
T Consensus 150 ~k~iINdvs~---~-~~~~~---~~~aa~~g~~vv~m~~ 181 (310)
T 2h9a_B 150 RNCLLSSATK---D-NYKPI---VATCMVHGHSVVASAP 181 (310)
T ss_dssp SCCEEEEECT---T-THHHH---HHHHHHHTCEEEEECS
T ss_pred CCCEEEECCC---C-ccHHH---HHHHHHhCCCEEEECh
Confidence 3322221 1 33333 3334444 79988763
No 358
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=75.35 E-value=27 Score=30.98 Aligned_cols=132 Identities=11% Similarity=0.049 Sum_probs=72.7
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEE-e--------------cCCCCHH
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG-N--------------TGSNSTR 137 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~-g--------------vg~~st~ 137 (356)
-|.+...+.++.+++.+++||++.+...+.. + ..++.+.+ .++||+. + |+....+
T Consensus 45 ~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~----~---~~~~~~~~---~giPvV~~~~~~~~~~~~~~~~~V~~D~~~ 114 (297)
T 3rot_A 45 NDVPKQVQFIESALATYPSGIATTIPSDTAF----S---KSLQRANK---LNIPVIAVDTRPKDKTKNPYLVFLGSDNLL 114 (297)
T ss_dssp CCHHHHHHHHHHHHHTCCSEEEECCCCSSTT----H---HHHHHHHH---HTCCEEEESCCCSCTTTSCCSCEEECCHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCHHHH----H---HHHHHHHH---CCCCEEEEcCCCccccccCcceEEccChHH
Confidence 3788889999999999999999877654321 1 22333322 2456543 2 2233455
Q ss_pred HHHHHHHHHHHcC--CCEEEEcCCCCCCCC-HHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHh-cCCCEEEE
Q 018443 138 EAIHATEQGFAVG--MHAALHINPYYGKTS-LEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMA-QSPNLAGV 212 (356)
Q Consensus 138 ~ai~lar~a~~~G--adavlv~pP~y~~~s-~~~l~~y~~~va~~-~PiilYn~P~~tG~~ls~~~l~~La-~~pnivGi 212 (356)
-.-..+++..+.| ...+.++...-...+ .+-...|.+.+.+. .++...... . ...-..+.+.++. ++|.+.+|
T Consensus 115 ~g~~a~~~l~~~g~~~~~i~~i~g~~~~~~~~~R~~Gf~~~l~~~g~~~~~~~~~-~-~~~~~~~~~~~~l~~~~~~~ai 192 (297)
T 3rot_A 115 AGKKLGEKALELTPSAKRALVLNPQPGHIGLEKRAYGIKTILQDKGIFFEELDVG-T-DPNQVQSRVKSYFKIHPETNII 192 (297)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEEESCTTCHHHHHHHHHHHHHHHHTTCEEEEEECC-S-CHHHHHHHHHHHHHHCTTCCEE
T ss_pred HHHHHHHHHHHhcCCCceEEEEeCCCCcHHHHHHHHHHHHHHHhcCCeEEEeecC-C-ChHHHHHHHHHHHHhCCCCCEE
Confidence 6677788888888 777766643222222 33334444444444 454433211 1 0111123455544 57877777
Q ss_pred eecC
Q 018443 213 KECV 216 (356)
Q Consensus 213 K~s~ 216 (356)
=-.+
T Consensus 193 ~~~~ 196 (297)
T 3rot_A 193 FCLT 196 (297)
T ss_dssp EESS
T ss_pred EEcC
Confidence 5443
No 359
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=75.20 E-value=19 Score=35.74 Aligned_cols=76 Identities=16% Similarity=0.205 Sum_probs=44.2
Q ss_pred HHHHHHHCCCCEEEEccCcccc--------cCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCC
Q 018443 81 LVNMQIVNGAEGMIVGGTTGEG--------QLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMH 152 (356)
Q Consensus 81 ~v~~li~~Gv~Gl~v~GstGE~--------~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gad 152 (356)
.++.+.+.|+++|.+....|-. ......--...+..+.+.+ ++|||+.=|-.+..++. .|..+|||
T Consensus 309 ~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~--~ipVia~GGI~~~~di~----kala~GAd 382 (514)
T 1jcn_A 309 QAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRF--GVPIIADGGIQTVGHVV----KALALGAS 382 (514)
T ss_dssp HHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGG--TCCEEEESCCCSHHHHH----HHHHTTCS
T ss_pred HHHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhC--CCCEEEECCCCCHHHHH----HHHHcCCC
Confidence 4667788999999883222211 1111233334444444433 68999833333344444 34558999
Q ss_pred EEEEcCCCCC
Q 018443 153 AALHINPYYG 162 (356)
Q Consensus 153 avlv~pP~y~ 162 (356)
+|++..++..
T Consensus 383 ~V~iG~~~l~ 392 (514)
T 1jcn_A 383 TVMMGSLLAA 392 (514)
T ss_dssp EEEESTTTTT
T ss_pred eeeECHHHHc
Confidence 9999998764
No 360
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=75.19 E-value=2.5 Score=41.47 Aligned_cols=87 Identities=8% Similarity=0.122 Sum_probs=57.3
Q ss_pred CCCHHHHHHHHHHHHH-CCCCEEEEccCcccccCC----CH-HHHHHHHHHHHHHhCCCcEEEEecCC-CCHHHHHHHHH
Q 018443 72 RFDLEAYDDLVNMQIV-NGAEGMIVGGTTGEGQLM----SW-DEHIMLIGHTVNCFGASVKVIGNTGS-NSTREAIHATE 144 (356)
Q Consensus 72 ~ID~~~l~~~v~~li~-~Gv~Gl~v~GstGE~~~L----t~-eEr~~li~~~~~~~~grvpVi~gvg~-~st~~ai~lar 144 (356)
-++.+....+++.+.+ .|++.|-+.+.+.+.+.. .. .....+++.+.+.+++++|||+ +|. .+.+++.+
T Consensus 260 G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~-~GgI~t~e~Ae~--- 335 (419)
T 3l5a_A 260 GYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIA-SGGINSPESALD--- 335 (419)
T ss_dssp EECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEE-CSSCCSHHHHHH---
T ss_pred CCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEE-ECCCCCHHHHHH---
Confidence 4678889999999999 999999887755321100 00 0122456667777778899885 444 44544443
Q ss_pred HHHHcCCCEEEEcCCCCCCC
Q 018443 145 QGFAVGMHAALHINPYYGKT 164 (356)
Q Consensus 145 ~a~~~Gadavlv~pP~y~~~ 164 (356)
+.+. +|.|++.-|+...|
T Consensus 336 -~L~~-aDlVaiGR~~IanP 353 (419)
T 3l5a_A 336 -ALQH-ADMVGMSSPFVTEP 353 (419)
T ss_dssp -HGGG-CSEEEESTHHHHCT
T ss_pred -HHHh-CCcHHHHHHHHHCc
Confidence 3334 99999988876544
No 361
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=75.18 E-value=3.3 Score=45.08 Aligned_cols=81 Identities=10% Similarity=0.104 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHCCCCEEEEccCcc---------------------cccCCC----HHHHHHHHHHHHHHhCCCcEEEEec
Q 018443 77 AYDDLVNMQIVNGAEGMIVGGTTG---------------------EGQLMS----WDEHIMLIGHTVNCFGASVKVIGNT 131 (356)
Q Consensus 77 ~l~~~v~~li~~Gv~Gl~v~GstG---------------------E~~~Lt----~eEr~~li~~~~~~~~grvpVi~gv 131 (356)
.+..+++.+.+.|+++|.+..|+. +...++ +.--.+++..+.+.+ +++|||+.=
T Consensus 716 ~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~-~~ipvi~~G 794 (1025)
T 1gte_A 716 DIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARAL-PGFPILATG 794 (1025)
T ss_dssp CHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHS-TTCCEEEES
T ss_pred HHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHc-CCCCEEEec
Confidence 356677788899999999843321 111111 111245677777766 468988654
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCC
Q 018443 132 GSNSTREAIHATEQGFAVGMHAALHINPYYG 162 (356)
Q Consensus 132 g~~st~~ai~lar~a~~~Gadavlv~pP~y~ 162 (356)
|=.+.+++.+... +|||+|++..+.+.
T Consensus 795 GI~s~~da~~~l~----~Ga~~v~vg~~~l~ 821 (1025)
T 1gte_A 795 GIDSAESGLQFLH----SGASVLQVCSAVQN 821 (1025)
T ss_dssp SCCSHHHHHHHHH----TTCSEEEESHHHHT
T ss_pred CcCCHHHHHHHHH----cCCCEEEEeecccc
Confidence 4446777766654 79999999988664
No 362
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=75.10 E-value=55 Score=31.07 Aligned_cols=126 Identities=8% Similarity=-0.028 Sum_probs=89.7
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHHHHHHHHHHcCC
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 151 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai~lar~a~~~Ga 151 (356)
.+.+.+.+.++..++.|.+.+=+-...+ +.++=.+.++.+.+.++.++++.+-+ ++.+.++++++++..++.|+
T Consensus 164 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~-----~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i 238 (392)
T 1tzz_A 164 KGLSMLRGEMRGYLDRGYNVVKMKIGGA-----PIEEDRMRIEAVLEEIGKDAQLAVDANGRFNLETGIAYAKMLRDYPL 238 (392)
T ss_dssp -CHHHHHHHHHHHHTTTCSEEEEECSSS-----CHHHHHHHHHHHHHHHTTTCEEEEECTTCCCHHHHHHHHHHHTTSCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCC-----CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 4778888889999999999986543322 35666788888888888889998865 45689999999999999998
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc------CCCEEEEeecC
Q 018443 152 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ------SPNLAGVKECV 216 (356)
Q Consensus 152 davlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~------~pnivGiK~s~ 216 (356)
+.+ --|.. +. =.+.+++|.+. .||+.=. .-.+++.++++.+ .-+++-+|-+-
T Consensus 239 ~~i--EqP~~--~~---d~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~i~~~~~~~~~d~v~ik~~~ 298 (392)
T 1tzz_A 239 FWY--EEVGD--PL---DYALQAALAEFYPGPMATGE------NLFSHQDARNLLRYGGMRPDRDWLQFDCAL 298 (392)
T ss_dssp SEE--ECCSC--TT---CHHHHHHHTTTCCSCEEECT------TCCSHHHHHHHHHHSCCCTTTCEECCCTTT
T ss_pred Cee--cCCCC--hh---hHHHHHHHHhhCCCCEEECC------CCCCHHHHHHHHHcCCCccCCcEEEECccc
Confidence 854 34432 11 25566777775 5766532 2356788888774 46788888653
No 363
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=74.96 E-value=12 Score=34.87 Aligned_cols=108 Identities=8% Similarity=0.007 Sum_probs=62.7
Q ss_pred HHHHHHHHCCCCEEEEccCccc-ccCC-CHHHHH-------HHHHHHHHHhCCCcEEEEecCCC---CHHHHHHHHHHHH
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGE-GQLM-SWDEHI-------MLIGHTVNCFGASVKVIGNTGSN---STREAIHATEQGF 147 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE-~~~L-t~eEr~-------~li~~~~~~~~grvpVi~gvg~~---st~~ai~lar~a~ 147 (356)
..++.+-+.||+..++.++..- .+.+ ..++.. +.+..+++...++..-++.+--. +.+++++..+++.
T Consensus 53 ~~l~~md~~GV~~~vl~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~p~rf~~~~~~p~~~~~~~~~a~~eL~r~~ 132 (350)
T 2gwg_A 53 NQLKKMQERGSDLTVFSPRASFMAHHIGDFNVSSTWAAICNELCYRVSQLFPDNFIGAAMLPQSPGVDPKTCIPELEKCV 132 (350)
T ss_dssp THHHHHHHHTCCEEEEECCC-------CCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECCCCTTSCGGGGHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEEcCCchhhccccCCHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCHHHHHHHHHHHH
Confidence 5677888899999888876532 1112 222221 11222333345564444444321 2466777777766
Q ss_pred -HcCCCEEEEcCC---CCC---CCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018443 148 -AVGMHAALHINP---YYG---KTSLEGLISHFDSVLSM-GPTIIYNV 187 (356)
Q Consensus 148 -~~Gadavlv~pP---~y~---~~s~~~l~~y~~~va~~-~PiilYn~ 187 (356)
+.|+.||-+-+- +|. ..+++.+...|+...+. +||+++--
T Consensus 133 ~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~~lpv~iH~~ 180 (350)
T 2gwg_A 133 KEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVELEIPAMIHVS 180 (350)
T ss_dssp HTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHHTCCEEECCC
T ss_pred hccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHcCCeEEECCC
Confidence 789999966442 221 25667788888888776 79998754
No 364
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=74.92 E-value=46 Score=30.29 Aligned_cols=103 Identities=17% Similarity=0.123 Sum_probs=70.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcC-CC
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVG-MH 152 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~G-ad 152 (356)
|+++-+..+++|++.|..-|.+.+.. ...-+..+|.+-+..+.+..+- +.+...+..+.++..+.++...+.+ .|
T Consensus 158 ~~~~~~~a~~~L~~~G~~~I~~i~~~--~~~~~~~~R~~Gf~~al~~~g~--~~~~~~~~~~~~~~~~~~~~ll~~~~~~ 233 (333)
T 3jvd_A 158 DEAGFFQLTESVLGGSGMNIAALVGE--ESLSTTQERMRGISHAASIYGA--EVTFHFGHYSVESGEEMAQVVFNNGLPD 233 (333)
T ss_dssp HHHHHHHHHHHHCCSSSCEEEEEESC--TTSHHHHHHHHHHHHHHHHTTC--EEEEEECCSSHHHHHHHHHHHHHTCCCS
T ss_pred hHHHHHHHHHHHHHCCCCeEEEEeCC--CCCccHHHHHHHHHHHHHHCCC--CEEEecCCCCHHHHHHHHHHHhcCCCCc
Confidence 46778888999999999888666543 2344678898888888876643 3444436667888888887776654 78
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHhc---CC----eEEEeC
Q 018443 153 AALHINPYYGKTSLEGLISHFDSVLSM---GP----TIIYNV 187 (356)
Q Consensus 153 avlv~pP~y~~~s~~~l~~y~~~va~~---~P----iilYn~ 187 (356)
|+++. ++.-...-++++.+. .| |+-||.
T Consensus 234 ai~~~-------nd~~A~g~~~al~~~G~~vP~disvig~D~ 268 (333)
T 3jvd_A 234 ALIVA-------SPRLMAGVMRAFTRLNVRVPHDVVIGGYDD 268 (333)
T ss_dssp EEEEC-------CHHHHHHHHHHHHHTTCCTTTTCEEEEESC
T ss_pred EEEEC-------CHHHHHHHHHHHHHcCCCCCCceEEEEECC
Confidence 88875 454444555555554 34 666764
No 365
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=74.88 E-value=40 Score=30.82 Aligned_cols=73 Identities=18% Similarity=0.158 Sum_probs=37.1
Q ss_pred CCHHHHHHHHHHHHHCC-CCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec----CCCCHHHHHHHHHHHH
Q 018443 73 FDLEAYDDLVNMQIVNG-AEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT----GSNSTREAIHATEQGF 147 (356)
Q Consensus 73 ID~~~l~~~v~~li~~G-v~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv----g~~st~~ai~lar~a~ 147 (356)
.|.+...++++..++.| ++-|=+ |.. +..+...++++.+. +++++||+.- +..+.++.++..++++
T Consensus 116 ~~~~~~~~ll~~~l~~g~~dyIDv-----El~-~~~~~~~~l~~~a~---~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~ 186 (276)
T 3o1n_A 116 LTTGQYIDLNRAAVDSGLVDMIDL-----ELF-TGDDEVKATVGYAH---QHNVAVIMSNHDFHKTPAAEEIVQRLRKMQ 186 (276)
T ss_dssp CCHHHHHHHHHHHHHHTCCSEEEE-----EGG-GCHHHHHHHHHHHH---HTTCEEEEEEEESSCCCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCCEEEE-----ECc-CCHHHHHHHHHHHH---hCCCEEEEEeecCCCCcCHHHHHHHHHHHH
Confidence 45555666666666655 555544 221 11222233332221 2355666642 2345666677777777
Q ss_pred HcCCCEE
Q 018443 148 AVGMHAA 154 (356)
Q Consensus 148 ~~Gadav 154 (356)
+.|||-+
T Consensus 187 ~~GaDIv 193 (276)
T 3o1n_A 187 ELGADIP 193 (276)
T ss_dssp HTTCSEE
T ss_pred HcCCCEE
Confidence 7777765
No 366
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=74.82 E-value=15 Score=30.63 Aligned_cols=86 Identities=14% Similarity=0.155 Sum_probs=49.6
Q ss_pred HHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEc
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~ 157 (356)
.+.+++...+.+++-+.+..+.+. +.+.-.++++...+.-..+++|++| |...+++ . ..+++.|+|++..
T Consensus 58 ~e~lv~aa~~~~~diV~lS~~~~~----~~~~~~~~i~~L~~~g~~~i~v~vG-G~~~~~~-~---~~l~~~G~d~v~~- 127 (161)
T 2yxb_A 58 PEQVAMAAVQEDVDVIGVSILNGA----HLHLMKRLMAKLRELGADDIPVVLG-GTIPIPD-L---EPLRSLGIREIFL- 127 (161)
T ss_dssp HHHHHHHHHHTTCSEEEEEESSSC----HHHHHHHHHHHHHHTTCTTSCEEEE-ECCCHHH-H---HHHHHTTCCEEEC-
T ss_pred HHHHHHHHHhcCCCEEEEEeechh----hHHHHHHHHHHHHhcCCCCCEEEEe-CCCchhc-H---HHHHHCCCcEEEC-
Confidence 345666777778888877666552 4555566666665532235777765 2333332 1 2356788887652
Q ss_pred CCCCCCCCHHHHHHHHHHHH
Q 018443 158 NPYYGKTSLEGLISHFDSVL 177 (356)
Q Consensus 158 pP~y~~~s~~~l~~y~~~va 177 (356)
| ..+.++..++.+.+.
T Consensus 128 -~---~~~~~~~~~~~~~~~ 143 (161)
T 2yxb_A 128 -P---GTSLGEIIEKVRKLA 143 (161)
T ss_dssp -T---TCCHHHHHHHHHHHH
T ss_pred -C---CCCHHHHHHHHHHHH
Confidence 2 123455666666654
No 367
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=74.73 E-value=10 Score=37.20 Aligned_cols=95 Identities=20% Similarity=0.084 Sum_probs=73.2
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCC
Q 018443 72 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGM 151 (356)
Q Consensus 72 ~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Ga 151 (356)
+.|.+-+.+.++.+.+.|++-|.++-|.| .+++.+-.++++.+.+.. .+++=++. +++.--++.-+..|.++||
T Consensus 176 r~d~~~~~~v~~~~~~~Ga~~i~l~DTvG---~~~P~~v~~lv~~l~~~~--~~~i~~H~-Hnd~GlAvAN~laAv~aGa 249 (423)
T 3ivs_A 176 RSDLVDLLSLYKAVDKIGVNRVGIADTVG---CATPRQVYDLIRTLRGVV--SCDIECHF-HNDTGMAIANAYCALEAGA 249 (423)
T ss_dssp GSCHHHHHHHHHHHHHHCCSEEEEEETTS---CCCHHHHHHHHHHHHHHC--SSEEEEEE-BCTTSCHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHhCCCccccCCccC---cCCHHHHHHHHHHHHhhc--CCeEEEEE-CCCCchHHHHHHHHHHhCC
Confidence 57888899999999999999999999998 578999999998888765 35654444 5677788888999999999
Q ss_pred CEEEEcCCCC----CCCCHHHHHHH
Q 018443 152 HAALHINPYY----GKTSLEGLISH 172 (356)
Q Consensus 152 davlv~pP~y----~~~s~~~l~~y 172 (356)
+.+=..-=-+ +.++-++++..
T Consensus 250 ~~vd~ti~GlGERaGNa~Le~vv~~ 274 (423)
T 3ivs_A 250 THIDTSILGIGERNGITPLGALLAR 274 (423)
T ss_dssp CEEEEBGGGCSSTTCBCBHHHHHHH
T ss_pred CEEEEecccccCcccchhHHHHHHH
Confidence 9886654333 23455666544
No 368
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=74.06 E-value=62 Score=30.80 Aligned_cols=127 Identities=7% Similarity=-0.074 Sum_probs=89.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccC-cccccCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCC--CHHHHHHHHHHHHHc
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGT-TGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSN--STREAIHATEQGFAV 149 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~Gs-tGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv-g~~--st~~ai~lar~a~~~ 149 (356)
|.+.+.+.+....+.|.+++=+-++ .|- .+ .++=.++++.+.+.++.++++.+-+ ++. +.++++++++..++.
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~spvG~--~~-~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~~~a~~~~~~l~~~ 221 (401)
T 2hzg_A 145 TPQETLERARAARRDGFAAVKFGWGPIGR--GT-VAADADQIMAAREGLGPDGDLMVDVGQIFGEDVEAAAARLPTLDAA 221 (401)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEESTTTTS--SC-HHHHHHHHHHHHHHHCSSSEEEEECTTTTTTCHHHHHTTHHHHHHT
T ss_pred CHHHHHHHHHHHHHhCCCeEEEcCCCCCC--CH-HHHHHHHHHHHHHHhCCCCeEEEECCCCCCCCHHHHHHHHHHHHhc
Confidence 7788889999999999999866421 121 22 1445678888888888889998865 455 789999999999999
Q ss_pred CCCEEEEcCCCCCCCCHHHHHHHHHHHHh-c--CCeEEEeCCCCCCCCCCHHHHHHHh--cCCCEEEEeecC
Q 018443 150 GMHAALHINPYYGKTSLEGLISHFDSVLS-M--GPTIIYNVPSRTGQDIPPRVIHTMA--QSPNLAGVKECV 216 (356)
Q Consensus 150 Gadavlv~pP~y~~~s~~~l~~y~~~va~-~--~PiilYn~P~~tG~~ls~~~l~~La--~~pnivGiK~s~ 216 (356)
|++.+ --|.- +. =.+.++++.+ . .||+.= +.-.+++.++++. ..-+++-+|-+-
T Consensus 222 ~i~~i--EqP~~--~~---d~~~~~~l~~~~~~iPI~~d------E~~~~~~~~~~~i~~~~~d~v~ik~~~ 280 (401)
T 2hzg_A 222 GVLWL--EEPFD--AG---ALAAHAALAGRGARVRIAGG------EAAHNFHMAQHLMDYGRIGFIQIDCGR 280 (401)
T ss_dssp TCSEE--ECCSC--TT---CHHHHHHHHTTCCSSEEEEC------TTCSSHHHHHHHHHHSCCSEEEECHHH
T ss_pred CCCEE--ECCCC--cc---CHHHHHHHHhhCCCCCEEec------CCcCCHHHHHHHHHCCCCCEEEeCcch
Confidence 99864 44531 11 1556677777 5 465543 2235678888887 357899999653
No 369
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=74.02 E-value=20 Score=31.64 Aligned_cols=60 Identities=10% Similarity=-0.064 Sum_probs=42.9
Q ss_pred CcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCC
Q 018443 124 SVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVP 188 (356)
Q Consensus 124 rvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~P 188 (356)
...+++.....+.+...+..+...+.++|++++.+... +.+...++.+.+. .|++++|.+
T Consensus 38 g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~-----~~~~~~~~~~~~~~iPvV~~~~~ 98 (293)
T 3l6u_A 38 KYEALVATSQNSRISEREQILEFVHLKVDAIFITTLDD-----VYIGSAIEEAKKAGIPVFAIDRM 98 (293)
T ss_dssp TCEEEEEECSSCHHHHHHHHHHHHHTTCSEEEEECSCT-----TTTHHHHHHHHHTTCCEEEESSC
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCCh-----HHHHHHHHHHHHcCCCEEEecCC
Confidence 34555555566788888899999999999999986532 2233455666665 799999864
No 370
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=73.83 E-value=52 Score=29.77 Aligned_cols=100 Identities=13% Similarity=0.055 Sum_probs=63.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHc--C
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAV--G 150 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~--G 150 (356)
.|.+...++++.+++.|++-|=++|...+. =..||-.+++..+.+. -++|+.+-+.. . + -++.|.++ |
T Consensus 22 ~~~~~a~~~a~~~v~~GAdiIDIg~g~~~v--~~~ee~~rvv~~i~~~--~~~pisIDT~~--~-~---v~~aAl~a~~G 91 (262)
T 1f6y_A 22 RDPAPVQEWARRQEEGGARALDLNVGPAVQ--DKVSAMEWLVEVTQEV--SNLTLCLDSTN--I-K---AIEAGLKKCKN 91 (262)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEBCC------CHHHHHHHHHHHHHTT--CCSEEEEECSC--H-H---HHHHHHHHCSS
T ss_pred CCHHHHHHHHHHHHHCCCcEEEECCCCCCC--ChHHHHHHHHHHHHHh--CCCeEEEeCCC--H-H---HHHHHHhhCCC
Confidence 589999999999999999999998843221 2466677777666543 26777665543 2 2 23334444 8
Q ss_pred CCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018443 151 MHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNV 187 (356)
Q Consensus 151 adavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~ 187 (356)
++-+--+.- .++.+.+-+..+++. .|+++-+.
T Consensus 92 a~iINdvs~-----~~d~~~~~~~~~a~~~~~vvlmh~ 124 (262)
T 1f6y_A 92 RAMINSTNA-----EREKVEKLFPLAVEHGAALIGLTM 124 (262)
T ss_dssp CEEEEEECS-----CHHHHHHHHHHHHHTTCEEEEESC
T ss_pred CCEEEECCC-----CcccHHHHHHHHHHhCCcEEEEcC
Confidence 776654432 145444556666665 78888765
No 371
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=73.83 E-value=23 Score=31.47 Aligned_cols=162 Identities=14% Similarity=0.053 Sum_probs=91.0
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCcccc-cCCCHHHHHHHHHHHHHHhCCCcEEE----------------------
Q 018443 72 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEG-QLMSWDEHIMLIGHTVNCFGASVKVI---------------------- 128 (356)
Q Consensus 72 ~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~-~~Lt~eEr~~li~~~~~~~~grvpVi---------------------- 128 (356)
+.|+..+.+.++.+.+.|++-+-+=---|-| +.+|.- ..+++...+.++ +.|+.
T Consensus 14 a~D~~~l~~~i~~~~~~g~d~iHvDvmDg~fvpn~t~G--~~~v~~lr~~~p-~~~~dvhLmv~dp~~~i~~~~~Ad~it 90 (227)
T 1tqx_A 14 ASNISKLAEETQRMESLGAEWIHLDVMDMHFVPNLSFG--PPVINNLKKYTK-SIFFDVHLMVEYPEKYVPLLKTSNQLT 90 (227)
T ss_dssp GSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCCC--HHHHHHHGGGCS-SCEEEEEEESSCGGGGGGGCTTSSEEE
T ss_pred cCChhhHHHHHHHHHHcCCCEEEEEEEeCCcCcchhcC--HHHHHHHHHhCC-CCcEEEEEEEcCHHHHHHHHHhCCEEE
Confidence 4788889999999999999876332222221 123321 144555544431 22332
Q ss_pred EecCCC--CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHh--cCCeEEE--eCCCCCCCCCCHHHHHH
Q 018443 129 GNTGSN--STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLS--MGPTIIY--NVPSRTGQDIPPRVIHT 202 (356)
Q Consensus 129 ~gvg~~--st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~--~~PiilY--n~P~~tG~~ls~~~l~~ 202 (356)
++..+. ...+++++++..++.|....+.+.|.. +.+.. +.+.+ ....++. -+|+..|..+.++.+.+
T Consensus 91 vH~ea~~~~~~~~i~~~~~i~~~G~k~gvalnp~t----p~~~~---~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~k 163 (227)
T 1tqx_A 91 FHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKT----DVQKL---VPILDTNLINTVLVMTVEPGFGGQSFMHDMMGK 163 (227)
T ss_dssp EEGGGGTTCHHHHHHHHHHHHTTTCEEEEEECTTS----CGGGG---HHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHH
T ss_pred EeecCCccCHHHHHHHHHHHHHcCCeEEEEeCCCC----cHHHH---HHHhhcCCcCEEEEeeeccCCCCcccchHHHHH
Confidence 233322 466777777788888888777776643 22222 33344 2333322 24777787777777666
Q ss_pred HhcCCCEEEEeecCchhhHhhhh-CCCeEEEecCcchhHhHHHHcCCceeecccccc
Q 018443 203 MAQSPNLAGVKECVGNDRVEHYT-GNGIVVWSGNDDQCHDARWNHGATGVISVTSNL 258 (356)
Q Consensus 203 La~~pnivGiK~s~~d~~i~~~~-~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~n~ 258 (356)
+.++- ++. +-.+.|-.|-...-.......|++.++.|.+-+
T Consensus 164 i~~lr---------------~~~~~~~I~VdGGI~~~ti~~~~~aGAd~~V~GsaIf 205 (227)
T 1tqx_A 164 VSFLR---------------KKYKNLNIQVDGGLNIETTEISASHGANIIVAGTSIF 205 (227)
T ss_dssp HHHHH---------------HHCTTCEEEEESSCCHHHHHHHHHHTCCEEEESHHHH
T ss_pred HHHHH---------------HhccCCeEEEECCCCHHHHHHHHHcCCCEEEEeHHHh
Confidence 65311 111 223455556554444455689999999886643
No 372
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=73.81 E-value=41 Score=28.55 Aligned_cols=164 Identities=10% Similarity=0.021 Sum_probs=87.8
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCC
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMH 152 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gad 152 (356)
.|.+...+.++.+.+ |++.+=+ |. +-+ ..+=.++++...+... +.|++++..-.++-++ .++.+.++|||
T Consensus 10 ~~~~~~~~~~~~~~~-~v~~iev-~~-~~~----~~~g~~~i~~l~~~~~-~~~i~~~l~~~di~~~--~~~~a~~~Gad 79 (207)
T 3ajx_A 10 LSTEAALELAGKVAE-YVDIIEL-GT-PLI----KAEGLSVITAVKKAHP-DKIVFADMKTMDAGEL--EADIAFKAGAD 79 (207)
T ss_dssp SCHHHHHHHHHHHGG-GCSEEEE-CH-HHH----HHHCTHHHHHHHHHST-TSEEEEEEEECSCHHH--HHHHHHHTTCS
T ss_pred CCHHHHHHHHHHhhc-cCCEEEE-Cc-HHH----HhhCHHHHHHHHHhCC-CCeEEEEEEecCccHH--HHHHHHhCCCC
Confidence 477888888888877 8888766 21 111 2222446776666543 5688886654442222 45788899999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCC-CHHH-HHHHhcC-CCEEEEeecC-----ch----h
Q 018443 153 AALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDI-PPRV-IHTMAQS-PNLAGVKECV-----GN----D 219 (356)
Q Consensus 153 avlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~P~~tG~~l-s~~~-l~~La~~-pnivGiK~s~-----~d----~ 219 (356)
++.+.+- ..++.+.+..+.+.+. .++.+-- ... +|+. +.++.+. ...+++.-+. +. .
T Consensus 80 ~v~vh~~----~~~~~~~~~~~~~~~~g~~~gv~~------~s~~~p~~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~ 149 (207)
T 3ajx_A 80 LVTVLGS----ADDSTIAGAVKAAQAHNKGVVVDL------IGIEDKATRAQEVRALGAKFVEMHAGLDEQAKPGFDLNG 149 (207)
T ss_dssp EEEEETT----SCHHHHHHHHHHHHHHTCEEEEEC------TTCSSHHHHHHHHHHTTCSEEEEECCHHHHTSTTCCTHH
T ss_pred EEEEecc----CChHHHHHHHHHHHHcCCceEEEE------ecCCChHHHHHHHHHhCCCEEEEEecccccccCCCchHH
Confidence 9986531 1234444443443333 3432211 012 4444 4555442 3444333221 11 2
Q ss_pred hHhhhh--CCCeEEEecCcchhHhHHHHcCCceeecccc
Q 018443 220 RVEHYT--GNGIVVWSGNDDQCHDARWNHGATGVISVTS 256 (356)
Q Consensus 220 ~i~~~~--~~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~ 256 (356)
++++.. +..+.+-.|-...-....+..|++|++.|.+
T Consensus 150 ~i~~~~~~~~pi~v~GGI~~~~~~~~~~aGad~vvvGsa 188 (207)
T 3ajx_A 150 LLAAGEKARVPFSVAGGVKVATIPAVQKAGAEVAVAGGA 188 (207)
T ss_dssp HHHHHHHHTSCEEEESSCCGGGHHHHHHTTCSEEEESHH
T ss_pred HHHHhhCCCCCEEEECCcCHHHHHHHHHcCCCEEEEeee
Confidence 344433 2335555555433334457899999987754
No 373
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=73.81 E-value=4 Score=38.21 Aligned_cols=74 Identities=18% Similarity=0.262 Sum_probs=44.3
Q ss_pred HHHHHHHCCCCEEEEccCc-----ccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEE
Q 018443 81 LVNMQIVNGAEGMIVGGTT-----GEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAAL 155 (356)
Q Consensus 81 ~v~~li~~Gv~Gl~v~Gst-----GE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavl 155 (356)
.+....+.|+|+|++-|.+ |.+. .. -.+++..+.+.+ ++||++.=|=.+.+++.+ +.++|||+|+
T Consensus 130 ~a~~~~~~GaD~i~v~g~~~GG~~G~~~-~~---~~~~l~~v~~~~--~iPviaaGGI~~~~~v~~----al~~GAdgV~ 199 (328)
T 2gjl_A 130 HALKAERLGVDAVSIDGFECAGHPGEDD-IP---GLVLLPAAANRL--RVPIIASGGFADGRGLVA----ALALGADAIN 199 (328)
T ss_dssp HHHHHHHTTCSEEEEECTTCSBCCCSSC-CC---HHHHHHHHHTTC--CSCEEEESSCCSHHHHHH----HHHHTCSEEE
T ss_pred HHHHHHHcCCCEEEEECCCCCcCCCCcc-cc---HHHHHHHHHHhc--CCCEEEECCCCCHHHHHH----HHHcCCCEEE
Confidence 3456778999999985533 3321 12 124444444433 689887544334444433 3346999999
Q ss_pred EcCCCCCCC
Q 018443 156 HINPYYGKT 164 (356)
Q Consensus 156 v~pP~y~~~ 164 (356)
+...++..+
T Consensus 200 vGs~~~~~~ 208 (328)
T 2gjl_A 200 MGTRFLATR 208 (328)
T ss_dssp ESHHHHTSS
T ss_pred ECHHHHcCc
Confidence 998876543
No 374
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=73.77 E-value=63 Score=30.75 Aligned_cols=133 Identities=13% Similarity=0.072 Sum_probs=90.3
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccC----ccc------ccCC---CHHHHHHHHHHHHHHhCCCcEEEEec-CCCCH
Q 018443 71 GRFDLEAYDDLVNMQIVNGAEGMIVGGT----TGE------GQLM---SWDEHIMLIGHTVNCFGASVKVIGNT-GSNST 136 (356)
Q Consensus 71 g~ID~~~l~~~v~~li~~Gv~Gl~v~Gs----tGE------~~~L---t~eEr~~li~~~~~~~~grvpVi~gv-g~~st 136 (356)
...|.+.+.+.+....+.|.+++=+-.. .|. ...- ..++=.+.++.+.+.++.++++.+=+ ++.+.
T Consensus 149 ~~~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~ 228 (407)
T 2o56_A 149 MLTEPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMHAFTDT 228 (407)
T ss_dssp CCCSHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCH
T ss_pred ccCCHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCCCH
Confidence 4468899999999999999999866431 131 0111 12344577777788888889998865 45589
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEEE
Q 018443 137 REAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGV 212 (356)
Q Consensus 137 ~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~--~pnivGi 212 (356)
++++++++..++.|++.+ --|.- +. -.+.+++|.+. .||+.=. .-.+++.++++.+ .-+++-+
T Consensus 229 ~~a~~~~~~l~~~~i~~i--E~P~~--~~---~~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~i~~~~~d~v~i 295 (407)
T 2o56_A 229 TSAIQFGRMIEELGIFYY--EEPVM--PL---NPAQMKQVADKVNIPLAAGE------RIYWRWGYRPFLENGSLSVIQP 295 (407)
T ss_dssp HHHHHHHHHHGGGCCSCE--ECSSC--SS---SHHHHHHHHHHCCSCEEECT------TCCHHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHHHHHhcCCCEE--eCCCC--hh---hHHHHHHHHHhCCCCEEeCC------CcCCHHHHHHHHHcCCCCEEec
Confidence 999999999999998754 33421 11 14556777765 5766533 2235788888873 5688889
Q ss_pred eecC
Q 018443 213 KECV 216 (356)
Q Consensus 213 K~s~ 216 (356)
|-+-
T Consensus 296 k~~~ 299 (407)
T 2o56_A 296 DICT 299 (407)
T ss_dssp CTTT
T ss_pred Cccc
Confidence 9764
No 375
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=73.61 E-value=5.2 Score=36.44 Aligned_cols=71 Identities=13% Similarity=0.117 Sum_probs=52.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEcCCCC---CCCCHHHHHHHHHHHHhc-----CCeEEEeCCCCCCCCCCHHHHHHH
Q 018443 132 GSNSTREAIHATEQGFAVGMHAALHINPYY---GKTSLEGLISHFDSVLSM-----GPTIIYNVPSRTGQDIPPRVIHTM 203 (356)
Q Consensus 132 g~~st~~ai~lar~a~~~Gadavlv~pP~y---~~~s~~~l~~y~~~va~~-----~PiilYn~P~~tG~~ls~~~l~~L 203 (356)
|..+.++++++++.|.+.|.+.+.+++-+. +..+.+.+.++++++.+. .|+-|+- -.=+.+.++....|
T Consensus 15 G~~~~~~sl~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~i~I~~---G~Ev~~~~~~~~~l 91 (262)
T 3qy7_A 15 GAGDSADSIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIKEDIPLHVLP---GQEIRIYGEVEQDL 91 (262)
T ss_dssp SCSSHHHHHHHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHHTTCCCEEEC---CCEEECCTTHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEec---CeEEecchhHHHHH
Confidence 567899999999999999999999887643 234678899999888653 4766653 12234667777777
Q ss_pred hc
Q 018443 204 AQ 205 (356)
Q Consensus 204 a~ 205 (356)
.+
T Consensus 92 ~~ 93 (262)
T 3qy7_A 92 AK 93 (262)
T ss_dssp HT
T ss_pred hc
Confidence 64
No 376
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=73.61 E-value=55 Score=30.01 Aligned_cols=107 Identities=12% Similarity=0.027 Sum_probs=69.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCc-------ccc--------cCCCHHHHHHHHHHHHHHhCCCcE--EEEecCCCCH
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTT-------GEG--------QLMSWDEHIMLIGHTVNCFGASVK--VIGNTGSNST 136 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~Gst-------GE~--------~~Lt~eEr~~li~~~~~~~~grvp--Vi~gvg~~st 136 (356)
|+++....+++|++.|..-|.+.+.. |.. ...+..+|.+-+..+.+..+-... .+...+..+.
T Consensus 173 ~~~~~~~a~~~L~~~G~r~I~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~~ 252 (366)
T 3h5t_A 173 NRKAIAPAAQALIDAGHRKIGILSIRLDRANNDGEVTRERLENAQYQVQRDRVRGAMEVFIEAGIDPGTVPIMECWINNR 252 (366)
T ss_dssp HHHHTHHHHHHHHHTTCCSEEEEEECCSSSCCCEECCHHHHHTCCCTTHHHHHHHHHHHHHHHTCCGGGSCEEEESSCCH
T ss_pred hHHHHHHHHHHHHHCCCCcEEEEecccccccccCccccccccccccchHHHHHHHHHHHHHHCCCCCCcceEEEcCCCCH
Confidence 46778889999999998877655521 322 367889999999888887653321 2333445677
Q ss_pred HHHHHHHHHHHHc--CCCEEEEcCCCCCCCCHHHHHHHHHHHHhc---CC----eEEEeC
Q 018443 137 REAIHATEQGFAV--GMHAALHINPYYGKTSLEGLISHFDSVLSM---GP----TIIYNV 187 (356)
Q Consensus 137 ~~ai~lar~a~~~--Gadavlv~pP~y~~~s~~~l~~y~~~va~~---~P----iilYn~ 187 (356)
++..+.++...+. ..||+++. ++.-...-++++.+. .| |+=||.
T Consensus 253 ~~~~~~~~~ll~~~~~~~ai~~~-------nD~~A~g~~~al~~~G~~vP~disvigfD~ 305 (366)
T 3h5t_A 253 QHNFEVAKELLETHPDLTAVLCT-------VDALAFGVLEYLKSVGKSAPADLSLTGFDG 305 (366)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEES-------SHHHHHHHHHHHHHTTCCTTTTCEEEEEEC
T ss_pred HHHHHHHHHHHcCCCCCcEEEEC-------CcHHHHHHHHHHHHcCCCCCCceEEEEECC
Confidence 7777777766543 47888875 455444555555554 34 676774
No 377
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=73.47 E-value=19 Score=31.26 Aligned_cols=134 Identities=10% Similarity=0.083 Sum_probs=72.4
Q ss_pred CCCCHHHHHHHHHHHHHCC-CCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEE------------ecCCCCHH
Q 018443 71 GRFDLEAYDDLVNMQIVNG-AEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG------------NTGSNSTR 137 (356)
Q Consensus 71 g~ID~~~l~~~v~~li~~G-v~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~------------gvg~~st~ 137 (356)
..-|.+...+.++.+++.+ ++|+++.+...+ .+.+ .++.+.+ .++||+. .|+....+
T Consensus 40 ~~~~~~~~~~~i~~l~~~~~vdgii~~~~~~~---~~~~----~~~~~~~---~~ipvV~~~~~~~~~~~~~~V~~d~~~ 109 (276)
T 3ksm_A 40 DDGDIAGQIQILSYHLSQAPPDALILAPNSAE---DLTP----SVAQYRA---RNIPVLVVDSDLAGDAHQGLVATDNYA 109 (276)
T ss_dssp STTCHHHHHHHHHHHHHHSCCSEEEECCSSTT---TTHH----HHHHHHH---TTCCEEEESSCCSSSCSSEEEECCHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCCEEEEeCCCHH---HHHH----HHHHHHH---CCCcEEEEecCCCCCCcceEEccCHHH
Confidence 4568888899999999999 999999876432 1222 2222222 2455432 23334456
Q ss_pred HHHHHHHHHHHc----CCCEEEEcCCCCCCCCHHHHHHHHHHHHhcC---CeEEEeCCCCCCCCCCHHHHHHHh-cCCCE
Q 018443 138 EAIHATEQGFAV----GMHAALHINPYYGKTSLEGLISHFDSVLSMG---PTIIYNVPSRTGQDIPPRVIHTMA-QSPNL 209 (356)
Q Consensus 138 ~ai~lar~a~~~----Gadavlv~pP~y~~~s~~~l~~y~~~va~~~---PiilYn~P~~tG~~ls~~~l~~La-~~pni 209 (356)
..-..+++..+. |..-+.++.......+..+-.+-|++..+.. ++. ..........-..+.+.++. ++|.+
T Consensus 110 ~g~~~~~~l~~~~~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~ 188 (276)
T 3ksm_A 110 AGQLAARALLATLDLSKERNIALLRLRAGNASTDQREQGFLDVLRKHDKIRII-AAPYAGDDRGAARSEMLRLLKETPTI 188 (276)
T ss_dssp HHHHHHHHHHHHSCTTSCEEEEECBCCTTCHHHHHHHHHHHHHHTTCTTEEEE-ECCBCCSSHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHHHHhcCcCCCceEEEEEcCCCchhHHHHHHHHHHHHHhCCCcEEE-EEecCCCcHHHHHHHHHHHHHhCCCc
Confidence 667788888888 9888877754322222333344444444332 332 11111101111123455555 57777
Q ss_pred EEEeec
Q 018443 210 AGVKEC 215 (356)
Q Consensus 210 vGiK~s 215 (356)
.+|=-.
T Consensus 189 ~ai~~~ 194 (276)
T 3ksm_A 189 DGLFTP 194 (276)
T ss_dssp CEEECC
T ss_pred eEEEEC
Confidence 776544
No 378
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=73.45 E-value=8.4 Score=34.48 Aligned_cols=131 Identities=11% Similarity=0.153 Sum_probs=77.8
Q ss_pred eEeeecccCCCC---CCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCH
Q 018443 60 ITAIKTPYLPDG---RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNST 136 (356)
Q Consensus 60 i~al~TPf~~dg---~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st 136 (356)
+-+++=|=..|. ..+++.+.+-++.+.+.|++|++++.-|-++ .+..+--++|++.+ + ..++..+=.-..+
T Consensus 57 V~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg-~iD~~~~~~Li~~a----~-~~~vTFHRAFD~~ 130 (224)
T 2bdq_A 57 VAVMIRPRGGNFVYNDLELRIMEEDILRAVELESDALVLGILTSNN-HIDTEAIEQLLPAT----Q-GLPLVFHMAFDVI 130 (224)
T ss_dssp EEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTS-SBCHHHHHHHHHHH----T-TCCEEECGGGGGS
T ss_pred eEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCC-CcCHHHHHHHHHHh----C-CCeEEEECchhcc
Confidence 344555633332 3567778888889999999999765555554 57776666666433 3 4677776432223
Q ss_pred --HHHHHHHHHHHHcCCCEEEEcCCCCCCCC--HHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh
Q 018443 137 --REAIHATEQGFAVGMHAALHINPYYGKTS--LEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA 204 (356)
Q Consensus 137 --~~ai~lar~a~~~Gadavlv~pP~y~~~s--~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La 204 (356)
.+-.+..+...++|++.|+-.- ...+ -.+-....+++.+. ..+.|- .|-.++++-+.+|.
T Consensus 131 ~~~d~~~ale~L~~lGv~rILTSG---~~~~~~a~~g~~~L~~Lv~~a~~ri~Im-----~GgGV~~~Ni~~l~ 196 (224)
T 2bdq_A 131 PKSDQKKSIDQLVALGFTRILLHG---SSNGEPIIENIKHIKALVEYANNRIEIM-----VGGGVTAENYQYIC 196 (224)
T ss_dssp CTTTHHHHHHHHHHTTCCEEEECS---CSSCCCGGGGHHHHHHHHHHHTTSSEEE-----ECSSCCTTTHHHHH
T ss_pred CCcCHHHHHHHHHHcCCCEEECCC---CCCCCcHHHHHHHHHHHHHhhCCCeEEE-----eCCCCCHHHHHHHH
Confidence 4445556677788999999542 1122 33334455555442 223222 24456666677765
No 379
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=73.41 E-value=46 Score=32.04 Aligned_cols=152 Identities=9% Similarity=0.021 Sum_probs=100.5
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCC---HHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHHHHHHHH
Q 018443 71 GRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMS---WDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQG 146 (356)
Q Consensus 71 g~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt---~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai~lar~a 146 (356)
|.-+.+.+.+.++.+++.|.+.+=+.|..+.....+ .++=.+.++.+.+.++.++++++=+ ++-+.++++++++..
T Consensus 122 ~~~~~e~~~~~a~~~~~~G~~~iKl~G~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~~~~~~~A~~~~~~L 201 (405)
T 3rr1_A 122 GGDRPADVIAGMKALQAGGFDHFKLNGCEEMGIIDTSRAVDAAVARVAEIRSAFGNTVEFGLDFHGRVSAPMAKVLIKEL 201 (405)
T ss_dssp CCSSHHHHHHHHHHHHHTTCCEEEEESCCSSSCBCSHHHHHHHHHHHHHHHHTTGGGSEEEEECCSCBCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCCcccccccchhHHHHHHHHHHHHHHhCCCceEEEECCCCCCHHHHHHHHHHH
Confidence 345788999999999999999986655433222222 3445677888888888889998865 455899999999999
Q ss_pred HHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEEEeecC--chh-
Q 018443 147 FAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV--GND- 219 (356)
Q Consensus 147 ~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~--~pnivGiK~s~--~d~- 219 (356)
++.|++.+= -|.- +. . .+.+++|.+. .||+.=. ...+++.+.++.+ .-.++-+|-+. |-.
T Consensus 202 ~~~~i~~iE--eP~~--~~--d-~~~~~~l~~~~~iPIa~dE------~i~~~~~~~~~l~~~a~d~v~~d~~~~GGite 268 (405)
T 3rr1_A 202 EPYRPLFIE--EPVL--AE--Q-AETYARLAAHTHLPIAAGE------RMFSRFDFKRVLEAGGVSILQPDLSHAGGITE 268 (405)
T ss_dssp GGGCCSCEE--CSSC--CS--S-THHHHHHHTTCSSCEEECT------TCCSHHHHHHHHHHCCCSEECCBTTTTTHHHH
T ss_pred HhcCCCEEE--CCCC--cc--c-HHHHHHHHhcCCCCEEecC------CcCCHHHHHHHHHHhCCCeEEEChhhcCCHHH
Confidence 999987653 3421 11 1 3456777776 5766432 3356778888873 56788888754 222
Q ss_pred --hHhhhh-CCCeEEEecC
Q 018443 220 --RVEHYT-GNGIVVWSGN 235 (356)
Q Consensus 220 --~i~~~~-~~~~~v~~G~ 235 (356)
++..+. .-++.+..+.
T Consensus 269 a~kia~lA~~~gi~v~~h~ 287 (405)
T 3rr1_A 269 CVKIAAMAEAYDVALAPHC 287 (405)
T ss_dssp HHHHHHHHHTTTCEECCBC
T ss_pred HHHHHHHHHHcCCEEEeCC
Confidence 344332 3456665543
No 380
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=73.39 E-value=66 Score=31.22 Aligned_cols=150 Identities=9% Similarity=-0.022 Sum_probs=98.1
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCc------ccccCC-CHHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHHHHHH
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTT------GEGQLM-SWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATE 144 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~Gst------GE~~~L-t~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai~lar 144 (356)
-+.+.+.+.++.+++.|.+.+=+-... |..... +.++=.+.++.+.+.++.++++++=+ ++.+.++++++++
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~~~t~~~A~~~~~ 224 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQ 224 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHH
Confidence 478899999999999999998764221 211111 23455677888888888899998865 4558999999999
Q ss_pred HHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEEEeecC--ch
Q 018443 145 QGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV--GN 218 (356)
Q Consensus 145 ~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~--~pnivGiK~s~--~d 218 (356)
..++.|.+.+= -|.- ..+ .+.+++|.+. .||+.=. .-.++..++++.+ .-.++-+|.+. |-
T Consensus 225 ~Le~~~i~~iE--eP~~-~~~----~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~l~~g~~D~v~~d~~~~GGi 291 (433)
T 3rcy_A 225 AIEPYSPLWYE--EPVP-PDN----VGAMAQVARAVRIPVATGE------RLTTKAEFAPVLREGAAAILQPALGRAGGI 291 (433)
T ss_dssp HHGGGCCSEEE--CCSC-TTC----HHHHHHHHHHSSSCEEECT------TCCSHHHHHHHHHTTCCSEECCCHHHHTHH
T ss_pred HhhhcCCCEEE--CCCC-hhh----HHHHHHHHhccCCCEEecC------CCCCHHHHHHHHHcCCCCEEEeCchhcCCH
Confidence 99999987653 3421 112 4456777775 5776532 2356888888874 45778788653 22
Q ss_pred h---hHhhhh-CCCeEEEecC
Q 018443 219 D---RVEHYT-GNGIVVWSGN 235 (356)
Q Consensus 219 ~---~i~~~~-~~~~~v~~G~ 235 (356)
. ++..+. .-++.+..+.
T Consensus 292 t~~~kia~lA~~~gv~~~~h~ 312 (433)
T 3rcy_A 292 WEMKKVAAMAEVYNAQMAPHL 312 (433)
T ss_dssp HHHHHHHHHHHTTTCEECCCC
T ss_pred HHHHHHHHHHHHcCCEEEecC
Confidence 2 343332 3356655543
No 381
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=73.22 E-value=8.3 Score=37.00 Aligned_cols=131 Identities=12% Similarity=0.063 Sum_probs=73.3
Q ss_pred EeeecccCCCCCC-CHHHHHHHHHHHHHCCCCEEEEccCcccccCC--CHHHHHHHHHHHHHHhCCCcEEEEecCC----
Q 018443 61 TAIKTPYLPDGRF-DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLM--SWDEHIMLIGHTVNCFGASVKVIGNTGS---- 133 (356)
Q Consensus 61 ~al~TPf~~dg~I-D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~L--t~eEr~~li~~~~~~~~grvpVi~gvg~---- 133 (356)
|.++.|++- |+. ..+-.+.+.+-..+.|+... +||.... ..+.+.. .+.+.+ .+.++|++++++.
T Consensus 61 Pv~ia~MtG-gt~~~~~in~~la~~a~~~G~~~~-----vGs~~~~l~~~~~~~s-~~~vr~-~ap~~~~~anlg~~ql~ 132 (368)
T 3vkj_A 61 PVMVTGMTG-GRNELGRINKIIAEVAEKFGIPMG-----VGSQRVAIEKAEARES-FAIVRK-VAPTIPIIANLGMPQLV 132 (368)
T ss_dssp SEEECCCCC-SSHHHHHHHHHHHHHHHHHTCCEE-----CCCCHHHHHCGGGSHH-HHHHHH-HCSSSCEEEEEEGGGGG
T ss_pred CeEEecCCC-CCchhhHHHHHHHHHHHHhCCCee-----eecchhccCCHHHHhh-HHHHHH-hCcCcceecCcCeeecC
Confidence 566777763 432 34445566666667786544 3444322 1222222 122223 3567899998877
Q ss_pred --CCHHHHHHHHHHHHHcCCCEEEEcCCCC-------CCCCHH-HHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHH
Q 018443 134 --NSTREAIHATEQGFAVGMHAALHINPYY-------GKTSLE-GLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIH 201 (356)
Q Consensus 134 --~st~~ai~lar~a~~~Gadavlv~pP~y-------~~~s~~-~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~ 201 (356)
.+.+++.+.++.+ ++|+..+.-... ...+.. +..+..+.|.+. .||++=. +|..++++..+
T Consensus 133 ~~~~~~~~~~av~~~---~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPVivK~----vG~g~s~~~A~ 205 (368)
T 3vkj_A 133 KGYGLKEFQDAIQMI---EADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELSVPIIVKE----SGNGISMETAK 205 (368)
T ss_dssp TTCCHHHHHHHHHHT---TCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTCSSCEEEEC----SSSCCCHHHHH
T ss_pred CCCCHHHHHHHHHHh---cCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHcCCCEEEEe----CCCCCCHHHHH
Confidence 3455544444443 667666543211 011111 467777777776 6998864 56678999888
Q ss_pred HHhcC
Q 018443 202 TMAQS 206 (356)
Q Consensus 202 ~La~~ 206 (356)
++.+.
T Consensus 206 ~l~~a 210 (368)
T 3vkj_A 206 LLYSY 210 (368)
T ss_dssp HHHHT
T ss_pred HHHhC
Confidence 88753
No 382
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=73.21 E-value=16 Score=34.87 Aligned_cols=83 Identities=8% Similarity=-0.032 Sum_probs=57.6
Q ss_pred CHHHHHHHHHHHH---HCCCCEEEEccCc----ccccCC-CHHHHHHHHHHHHHHhCCCcEEEEecCC-CCHHHHHHHHH
Q 018443 74 DLEAYDDLVNMQI---VNGAEGMIVGGTT----GEGQLM-SWDEHIMLIGHTVNCFGASVKVIGNTGS-NSTREAIHATE 144 (356)
Q Consensus 74 D~~~l~~~v~~li---~~Gv~Gl~v~Gst----GE~~~L-t~eEr~~li~~~~~~~~grvpVi~gvg~-~st~~ai~lar 144 (356)
|.+.+.+.++.+. +.|++.|-+|-+. |....+ +.+.-.++++.+.+.+ ++||++=+.- .+..+..+.++
T Consensus 137 ~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~--~~PV~vKi~p~~d~~~~~~~a~ 214 (354)
T 4ef8_A 137 SMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVY--PHSFGVKMPPYFDFAHFDAAAE 214 (354)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHC--CSCEEEEECCCCSHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhh--CCCeEEEecCCCCHHHHHHHHH
Confidence 5677777777776 5789999887652 322222 4577778888887765 5788885543 35666667777
Q ss_pred HHHHcC-CCEEEEcC
Q 018443 145 QGFAVG-MHAALHIN 158 (356)
Q Consensus 145 ~a~~~G-adavlv~p 158 (356)
.+.+.| +|++.+++
T Consensus 215 ~~~~~Gg~d~I~~~N 229 (354)
T 4ef8_A 215 ILNEFPKVQFITCIN 229 (354)
T ss_dssp HHHTCTTEEEEEECC
T ss_pred HHHhCCCccEEEEec
Confidence 777888 99998865
No 383
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=72.88 E-value=11 Score=34.98 Aligned_cols=82 Identities=7% Similarity=-0.010 Sum_probs=56.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCc----------ccccCCCHHHHHHHHHHHHHHhCCCcEEEEecC-CCCHHHHHHH
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTT----------GEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTG-SNSTREAIHA 142 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~Gst----------GE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg-~~st~~ai~l 142 (356)
|.+.+.+.++...+. +++|-+++.+ |-...-..+.-.++++.+.+.++ +||.+-+. +.+..+.+++
T Consensus 69 ~~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKir~G~~~~~~~~~ 145 (318)
T 1vhn_A 69 EPNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVS--GKFSVKTRLGWEKNEVEEI 145 (318)
T ss_dssp CHHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCS--SEEEEEEESCSSSCCHHHH
T ss_pred CHHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhC--CCEEEEecCCCChHHHHHH
Confidence 578899999999888 9999887532 21112245555666777766664 68877542 1233445699
Q ss_pred HHHHHHcCCCEEEEcC
Q 018443 143 TEQGFAVGMHAALHIN 158 (356)
Q Consensus 143 ar~a~~~Gadavlv~p 158 (356)
++.+++.|+|++.+..
T Consensus 146 a~~l~~~G~d~i~v~g 161 (318)
T 1vhn_A 146 YRILVEEGVDEVFIHT 161 (318)
T ss_dssp HHHHHHTTCCEEEEES
T ss_pred HHHHHHhCCCEEEEcC
Confidence 9999999999999853
No 384
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=72.78 E-value=21 Score=32.01 Aligned_cols=86 Identities=12% Similarity=0.081 Sum_probs=54.2
Q ss_pred EEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHH
Q 018443 92 GMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLIS 171 (356)
Q Consensus 92 Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~ 171 (356)
|+++...+..++ .+-.+-++..++.. ...++......+.++..+..+.+.+.++||+++.+... +.+..
T Consensus 6 gvi~~~~~~~~~----~~~~~gi~~~a~~~--g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~-----~~~~~ 74 (313)
T 3m9w_A 6 GMAIDDLRLERW----QKDRDIFVKKAESL--GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNG-----QVLSN 74 (313)
T ss_dssp EEEESCCSSSTT----HHHHHHHHHHHHHT--SCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSST-----TSCHH
T ss_pred EEEeCCCCChHH----HHHHHHHHHHHHHc--CCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCCCh-----hhhHH
Confidence 555555444433 23334444444444 34555555566788888899999999999999987532 22234
Q ss_pred HHHHHHhc-CCeEEEeCC
Q 018443 172 HFDSVLSM-GPTIIYNVP 188 (356)
Q Consensus 172 y~~~va~~-~PiilYn~P 188 (356)
.++.+.+. .|+++++.+
T Consensus 75 ~~~~~~~~~iPvV~~~~~ 92 (313)
T 3m9w_A 75 VVKEAKQEGIKVLAYDRM 92 (313)
T ss_dssp HHHHHHTTTCEEEEESSC
T ss_pred HHHHHHHCCCeEEEECCc
Confidence 55666665 799999864
No 385
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=72.72 E-value=15 Score=38.56 Aligned_cols=132 Identities=11% Similarity=0.131 Sum_probs=82.5
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEE---cc--------CcccccCC-CHH---HHHHHHHHHHHHhCCCcEEEEecCCCC-
Q 018443 72 RFDLEAYDDLVNMQIVNGAEGMIV---GG--------TTGEGQLM-SWD---EHIMLIGHTVNCFGASVKVIGNTGSNS- 135 (356)
Q Consensus 72 ~ID~~~l~~~v~~li~~Gv~Gl~v---~G--------stGE~~~L-t~e---Er~~li~~~~~~~~grvpVi~gvg~~s- 135 (356)
..+.+..+++||+-.+.|.++++| .. ..+-.+.+ +.- .-.+|++.+.+ ..|.+++......
T Consensus 367 g~nte~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~s---KGV~iilw~~t~~~ 443 (738)
T 2d73_A 367 SANTANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAAR---KGIKMMMHHETSAS 443 (738)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHH---TTCEEEEEEECTTB
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHh---CCCEEEEEEcCCCc
Confidence 389999999999999999999999 21 22211111 110 12345544443 4688888876665
Q ss_pred ---HHHHHH-HHHHHHHcCCCEEEEcCCCCC---CCCH----HHHHHHHHHHHhc---CCeEE-EeCC-CCCCCCCCHHH
Q 018443 136 ---TREAIH-ATEQGFAVGMHAALHINPYYG---KTSL----EGLISHFDSVLSM---GPTII-YNVP-SRTGQDIPPRV 199 (356)
Q Consensus 136 ---t~~ai~-lar~a~~~Gadavlv~pP~y~---~~s~----~~l~~y~~~va~~---~Piil-Yn~P-~~tG~~ls~~~ 199 (356)
.++-++ .-+..++.|+.+|=+- |+. ..++ +..++||..+++. --+++ ++=+ ..+|
T Consensus 444 ~~n~e~~~d~~f~~~~~~Gv~GVKvd--F~g~~~~r~~~h~~Q~~v~~Y~~i~~~AA~~~LmVnfHg~~kPtG------- 514 (738)
T 2d73_A 444 VRNYERHMDKAYQFMADNGYNSVKSG--YVGNIIPRGEHHYGQWMNNHYLYAVKKAADYKIMVNAHEATRPTG------- 514 (738)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEE--CCSSCBSTTCCTTSHHHHHHHHHHHHHHHHTTCEEEETTSCCCCS-------
T ss_pred hhhHHHHHHHHHHHHHHcCCCEEEeC--ccccCcCCcccccchHHHHHHHHHHHHHHHcCcEEEccCCcCCCc-------
Confidence 555554 6677889999999885 332 2333 7789999999874 24443 3322 2244
Q ss_pred HHHHh-cCCCEEEEeecCch
Q 018443 200 IHTMA-QSPNLAGVKECVGN 218 (356)
Q Consensus 200 l~~La-~~pnivGiK~s~~d 218 (356)
|. -.||+++---.-|.
T Consensus 515 ---l~RTYPN~~t~EgvrG~ 531 (738)
T 2d73_A 515 ---ICRTYPNLIGNESARGT 531 (738)
T ss_dssp ---GGGTCTTEEEECCSCCG
T ss_pred ---ccccCcchHHHhhhcce
Confidence 33 37999866544343
No 386
>3gdm_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, K93R mutant, lyase, phosphoprotein; 1.60A {Saccharomyces cerevisiae} SCOP: c.1.2.3 PDB: 3gdl_A* 3gdk_A* 3gdt_A* 3gdr_A* 1dqw_A 1dqx_A*
Probab=72.67 E-value=6.6 Score=36.06 Aligned_cols=98 Identities=9% Similarity=0.051 Sum_probs=59.8
Q ss_pred CceeEeeecccCCCCCCCHHHHHHHHHHHHH---CCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEE-ecC
Q 018443 57 LRLITAIKTPYLPDGRFDLEAYDDLVNMQIV---NGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG-NTG 132 (356)
Q Consensus 57 ~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~---~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~-gvg 132 (356)
+|++ ++|-++..|.+....+...+-.+.. .|++|+++.++ |.. +..+.+..++. ||+
T Consensus 145 ~~ll--lla~mss~~~l~~~~~~~~v~~~A~~a~~g~dGvV~s~~--~~~---------------~~~g~~f~~vTPGIr 205 (267)
T 3gdm_A 145 RGLL--MLAELSCKGSLATGEYTKGTVDIAKSDKDFVIGFIAQRD--MGG---------------RDEGYDWLIMTPGVG 205 (267)
T ss_dssp CEEE--EECSCCSTTCCCCHHHHHHHHHHHTTCTTTEEEEECSSC--CCC---------------GGGTCCCEEEECSEE
T ss_pred CCeE--EEEEcCCccccccCCHHHHHHHHHHHHhcCCCeEEeCcc--chh---------------hccCCCCEEECCCcC
Confidence 4544 4677877777665566666665554 28999976553 421 33454554443 775
Q ss_pred C----CCHHHHHHHHHHHHHcCCCEEEEcCCCCC-CCCHHHHHHHH
Q 018443 133 S----NSTREAIHATEQGFAVGMHAALHINPYYG-KTSLEGLISHF 173 (356)
Q Consensus 133 ~----~st~~ai~lar~a~~~Gadavlv~pP~y~-~~s~~~l~~y~ 173 (356)
. .+..+.-.--..|.+.|+|.++|--|.|. ..++.+..+-|
T Consensus 206 ~~~~g~~~gdQ~rTP~~Ai~~GaD~iVVGRpI~~~a~dP~~aa~~i 251 (267)
T 3gdm_A 206 LDDKGDALGQQYRTVDDVVSTGSDIIIVGRGLFAKGRDAKVEGERY 251 (267)
T ss_dssp CCCTTCTTGGGSEEHHHHHHTTCSEEEECGGGTSTTCCHHHHHHHH
T ss_pred CCcCCCccccCCCCHHHHHHcCCCEEEEChhhccCCCCHHHHHHHH
Confidence 3 22333333445566799999999999998 77765443333
No 387
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=72.63 E-value=57 Score=29.75 Aligned_cols=177 Identities=14% Similarity=0.095 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccCcccccCCC-HHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHHHHHHHHHH-c-C
Q 018443 75 LEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMS-WDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFA-V-G 150 (356)
Q Consensus 75 ~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt-~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai~lar~a~~-~-G 150 (356)
|.+..-+.+.+.++|++-+.|.=--= .++ ......+++.+- ..++.++-++ |+.+.+|++..+|.|.+ + |
T Consensus 29 y~~~~~~~~a~~asg~e~vtva~rR~---~~~~~~~~~~~~~~i~---~~~~~~lpNTag~~ta~eAv~~a~lare~~~~ 102 (265)
T 1wv2_A 29 YKDLDETRRAIEASGAEIVTVAVRRT---NIGQNPDEPNLLDVIP---PDRYTILPNTAGCYDAVEAVRTCRLARELLDG 102 (265)
T ss_dssp SSSHHHHHHHHHHSCCSEEEEEGGGC---CC-------------C---TTTSEEEEECTTCCSHHHHHHHHHHHHTTTTS
T ss_pred CCCHHHHHHHHHHhCCCeEEEEEEee---ccccCCCcchHHhhhh---hcCCEECCcCCCCCCHHHHHHHHHHHHHHcCC
Confidence 33444455556689999887644211 221 112234443331 2378899887 67789999999999999 5 5
Q ss_pred CCEEE---EcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHhcC-CCEEEEeec----Cc----
Q 018443 151 MHAAL---HINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMAQS-PNLAGVKEC----VG---- 217 (356)
Q Consensus 151 adavl---v~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~P~~tG~~ls~~~l~~La~~-pnivGiK~s----~~---- 217 (356)
-+.|= +.-+.|..++..+.++-.+.+.++ ..++.|-.+ ++.+-++|.+. +.++ +=.. ++
T Consensus 103 ~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~d-------d~~~akrl~~~G~~aV-mPlg~pIGsG~Gi~ 174 (265)
T 1wv2_A 103 HNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSD-------DPIIARQLAEIGCIAV-MPLAGLIGSGLGIC 174 (265)
T ss_dssp CCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECS-------CHHHHHHHHHSCCSEE-EECSSSTTCCCCCS
T ss_pred CCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCC-------CHHHHHHHHHhCCCEE-EeCCccCCCCCCcC
Confidence 66663 334566678889999999999887 466667654 36778888864 4555 3211 11
Q ss_pred hhh-Hhhhh-CCCeEEEec--C--cchhHhHHHHcCCceeeccccccc---HHHHHHH
Q 018443 218 NDR-VEHYT-GNGIVVWSG--N--DDQCHDARWNHGATGVISVTSNLV---PGMMREL 266 (356)
Q Consensus 218 d~~-i~~~~-~~~~~v~~G--~--d~~~l~~~l~~Ga~G~is~~~n~~---P~~~~~l 266 (356)
|.. +.... ..++.|+.+ - .+.... ++.+|++|++.+++-.- |..+.+-
T Consensus 175 ~~~lI~~I~e~~~vPVI~eGGI~TPsDAa~-AmeLGAdgVlVgSAI~~a~dP~~ma~a 231 (265)
T 1wv2_A 175 NPYNLRIILEEAKVPVLVDAGVGTASDAAI-AMELGCEAVLMNTAIAHAKDPVMMAEA 231 (265)
T ss_dssp CHHHHHHHHHHCSSCBEEESCCCSHHHHHH-HHHHTCSEEEESHHHHTSSSHHHHHHH
T ss_pred CHHHHHHHHhcCCCCEEEeCCCCCHHHHHH-HHHcCCCEEEEChHHhCCCCHHHHHHH
Confidence 221 22111 234545442 1 123333 47999999998887655 6655443
No 388
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=72.41 E-value=18 Score=34.30 Aligned_cols=72 Identities=17% Similarity=0.241 Sum_probs=43.7
Q ss_pred HHHHHHHCCCCEEEEcc-----CcccccC--------CCHHHHHHHHHHHHHHhCCCcEEEEecCCC-CHHHHHHHHHHH
Q 018443 81 LVNMQIVNGAEGMIVGG-----TTGEGQL--------MSWDEHIMLIGHTVNCFGASVKVIGNTGSN-STREAIHATEQG 146 (356)
Q Consensus 81 ~v~~li~~Gv~Gl~v~G-----stGE~~~--------Lt~eEr~~li~~~~~~~~grvpVi~gvg~~-st~~ai~lar~a 146 (356)
.+....+.|+|.|.+-| ++|.+.. +. ...+++.+.+.+ ++|||+. |+. +.+++ ..+
T Consensus 157 ~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~---~~~~l~~i~~~~--~iPViaa-GGI~~~~~~----~~~ 226 (369)
T 3bw2_A 157 EARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIG---LLSLLAQVREAV--DIPVVAA-GGIMRGGQI----AAV 226 (369)
T ss_dssp HHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCC---HHHHHHHHHHHC--SSCEEEE-SSCCSHHHH----HHH
T ss_pred HHHHHHHcCCCEEEEeCCCcCCcCCCccccccccccccc---HHHHHHHHHHhc--CceEEEE-CCCCCHHHH----HHH
Confidence 35567789999999833 3454321 22 245555555544 6888763 333 44443 333
Q ss_pred HHcCCCEEEEcCCCCC
Q 018443 147 FAVGMHAALHINPYYG 162 (356)
Q Consensus 147 ~~~Gadavlv~pP~y~ 162 (356)
.+.|||+|++...+..
T Consensus 227 l~~GAd~V~vGs~~~~ 242 (369)
T 3bw2_A 227 LAAGADAAQLGTAFLA 242 (369)
T ss_dssp HHTTCSEEEESHHHHT
T ss_pred HHcCCCEEEEChHHhC
Confidence 4589999999876543
No 389
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=72.19 E-value=16 Score=34.31 Aligned_cols=73 Identities=16% Similarity=0.132 Sum_probs=48.4
Q ss_pred HHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHH----HHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCE
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLI----GHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHA 153 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li----~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gada 153 (356)
+.++++.++++|+++|.+.-+.|-...||.++.++.+ +.+++.++ ++|++ +...+. .. +.....+.|+|+
T Consensus 192 ~~~~~~~qi~aGad~i~i~D~~a~~~~lsp~~f~~f~~p~~k~i~~~~~-~~~ii-h~~g~~-~~---~l~~~~~~g~d~ 265 (348)
T 4ay7_A 192 SIIYANAMVEAGADVIAIADPVASPDLMSPDSFRQFLKSRLQKFASSVN-SVTVL-HICGNV-NP---ILSDMADCGFEG 265 (348)
T ss_dssp HHHHHHHHHHHTCSEEEEECGGGSTTTSCHHHHHHHHHHHHHHHHHHSS-SEEEE-ECCSCC-HH---HHHHHHTSCCSE
T ss_pred HHHHHHHHHhcCCCcceeeccccccccCCHHHHHHHhhHHHHHHHhhcc-CCcEE-EecCCc-HH---HHHHHHHhcccc
Confidence 3445667788999999998887766689999988865 34445454 45555 443332 22 344556789998
Q ss_pred EEE
Q 018443 154 ALH 156 (356)
Q Consensus 154 vlv 156 (356)
+-+
T Consensus 266 i~~ 268 (348)
T 4ay7_A 266 LSV 268 (348)
T ss_dssp EEC
T ss_pred ccc
Confidence 753
No 390
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=72.10 E-value=14 Score=32.21 Aligned_cols=131 Identities=8% Similarity=0.037 Sum_probs=71.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEE-e----------cCCCCHHHHHHH
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG-N----------TGSNSTREAIHA 142 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~-g----------vg~~st~~ai~l 142 (356)
|.+...+.++.+++.+++|+++.+...+. . + .++.+.+ .++||+. + |+....+..-..
T Consensus 43 ~~~~~~~~~~~l~~~~vdgiIi~~~~~~~----~-~---~~~~~~~---~~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a 111 (272)
T 3o74_A 43 QPDSERQLQQLFRARRCDALFVASCLPPE----D-D---SYRELQD---KGLPVIAIDRRLDPAHFCSVISDDRDASRQL 111 (272)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCCCCSS----C-C---HHHHHHH---TTCCEEEESSCCCTTTCEEEEECHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCcccc----H-H---HHHHHHH---cCCCEEEEccCCCccccCEEEEchHHHHHHH
Confidence 67788899999999999999998765331 1 1 2222222 3567543 2 222345556677
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCe-EEEeCCCCCCCCCCHHHHHHHh-cCC-CEEEEeecCc
Q 018443 143 TEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPT-IIYNVPSRTGQDIPPRVIHTMA-QSP-NLAGVKECVG 217 (356)
Q Consensus 143 ar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~Pi-ilYn~P~~tG~~ls~~~l~~La-~~p-nivGiK~s~~ 217 (356)
+++..+.|...+.++.......+..+-.+-|++..+. .++ .++... . ...-..+.+.++. ++| .+.+|=- .+
T Consensus 112 ~~~L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~-~-~~~~~~~~~~~~l~~~~~~~~ai~~-~~ 188 (272)
T 3o74_A 112 AASLLSSAPRSIALIGARPELSVSQARAGGFDEALQGYTGEVRRYQGEA-F-SRECGQRLMQQLIDDLGGLPDALVT-TS 188 (272)
T ss_dssp HHHHHTTCCSEEEEEEECTTSHHHHHHHHHHHHHTTTCCSEEEEEEESS-S-SHHHHHHHHHHHHHHHTSCCSEEEE-SS
T ss_pred HHHHHHCCCcEEEEEecCCCCccHHHHHHHHHHHHHHcCCChheeecCC-C-CHHHHHHHHHHHHhcCCCCCcEEEE-eC
Confidence 7888889988887765433222334444445554444 332 233211 0 0111124455555 466 5666643 34
Q ss_pred h
Q 018443 218 N 218 (356)
Q Consensus 218 d 218 (356)
|
T Consensus 189 d 189 (272)
T 3o74_A 189 Y 189 (272)
T ss_dssp H
T ss_pred c
Confidence 4
No 391
>5rub_A Rubisco (ribulose-1,5-bisphosphate carboxylase(slash)oxygenase); lyase(carbon-carbon); 1.70A {Rhodospirillum rubrum} SCOP: c.1.14.1 d.58.9.1 PDB: 1rus_A 2rus_A 9rub_A* 1rba_A
Probab=71.99 E-value=29 Score=34.57 Aligned_cols=91 Identities=15% Similarity=0.168 Sum_probs=64.8
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHH----hCCCcEEEEecCCCCHHHHH
Q 018443 65 TPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNC----FGASVKVIGNTGSNSTREAI 140 (356)
Q Consensus 65 TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~----~~grvpVi~gvg~~st~~ai 140 (356)
|-+++.--+.-+.+.+.+-.+...| |-+====.-+....+.++||...+-.+++. ++.+.-..+++++.+++|.+
T Consensus 187 tiiKPklGLsp~~~a~~~ye~~~GG-DfiKDDE~l~sQpf~p~~eR~~~v~eAi~rA~~eTGe~k~y~~NITa~~~~eM~ 265 (490)
T 5rub_A 187 TIIKPKLGLRPKPFAEACHAFWLGG-DFIKNDEPQGNQPFAPLRDTIALVADAMRRAQDETGEAKLFSANITADDPFEII 265 (490)
T ss_dssp EECSSSSCCCHHHHHHHHHHHTTTC-SEEECCTTCSCBTTBCHHHHHHHHHHHHHHHHHHHSSCCEEEEECCCSSHHHHH
T ss_pred EEeccccCCCHHHHHHHHHHHHhcC-CcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCHHHHH
Confidence 4445544588999999999888777 654211133456778899998877666553 34444457799988899999
Q ss_pred HHHHHHHHc-CCC----EEEE
Q 018443 141 HATEQGFAV-GMH----AALH 156 (356)
Q Consensus 141 ~lar~a~~~-Gad----avlv 156 (356)
++++.|++. |++ ++|+
T Consensus 266 ~RAe~a~e~~G~~~g~~~vMv 286 (490)
T 5rub_A 266 ARGEYVLETFGENASHVALLV 286 (490)
T ss_dssp HHHHHHHHHHGGGGGGEEEEE
T ss_pred HHHHHHHHhcCCccCceEEEE
Confidence 999999996 765 5555
No 392
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=71.79 E-value=29 Score=33.23 Aligned_cols=95 Identities=9% Similarity=0.005 Sum_probs=43.9
Q ss_pred HHHHHHCCCCEEEEccCcccccC----CCHHHHHHHHHHHHHHhC---CCcEEEEecC---CCCHHHHHHHHHHHHHcCC
Q 018443 82 VNMQIVNGAEGMIVGGTTGEGQL----MSWDEHIMLIGHTVNCFG---ASVKVIGNTG---SNSTREAIHATEQGFAVGM 151 (356)
Q Consensus 82 v~~li~~Gv~Gl~v~GstGE~~~----Lt~eEr~~li~~~~~~~~---grvpVi~gvg---~~st~~ai~lar~a~~~Ga 151 (356)
++..+++|++.+-+..++.+.+. +|.+|-.+.++.+++.+. +...|.++.. ..+.+..++.++.+.++ +
T Consensus 80 i~~a~~~g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~-a 158 (382)
T 2ztj_A 80 AKVAVETGVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPY-V 158 (382)
T ss_dssp HHHHHHTTCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGG-C
T ss_pred HHHHHHcCCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHh-c
Confidence 56666778888877777777433 355554444444443322 1134444332 22344555555555555 5
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHh
Q 018443 152 HAALHINPYYGKTSLEGLISHFDSVLS 178 (356)
Q Consensus 152 davlv~pP~y~~~s~~~l~~y~~~va~ 178 (356)
|.+.+.. ..+..++.++.+.++.+.+
T Consensus 159 ~~i~l~D-T~G~~~P~~~~~lv~~l~~ 184 (382)
T 2ztj_A 159 DRVGLAD-TVGVATPRQVYALVREVRR 184 (382)
T ss_dssp SEEEEEE-TTSCCCHHHHHHHHHHHHH
T ss_pred CEEEecC-CCCCCCHHHHHHHHHHHHH
Confidence 5443321 2333344444444444433
No 393
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=71.31 E-value=68 Score=30.35 Aligned_cols=142 Identities=11% Similarity=0.093 Sum_probs=97.3
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHHHHHHHHHHcC
Q 018443 72 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVG 150 (356)
Q Consensus 72 ~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai~lar~a~~~G 150 (356)
.-|.+.+.+.++.+.+.|.+.+=+.-.. +.++=.+.++.+.+.++.++++.+=+ ++-+.++++++++..++.|
T Consensus 143 ~~~~e~~~~~a~~~~~~G~~~iKiK~G~------~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~ 216 (378)
T 3eez_A 143 AKSVEETRAVIDRYRQRGYVAHSVKIGG------DVERDIARIRDVEDIREPGEIVLYDVNRGWTRQQALRVMRATEDLH 216 (378)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCS------CHHHHHHHHHHHTTSCCTTCEEEEECTTCCCHHHHHHHHHHTGGGT
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEeccCC------CHHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHhccCC
Confidence 3577889999999999999998553221 56777788888888887888998865 4568999999999999988
Q ss_pred CCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEEEeecC--chh---hH
Q 018443 151 MHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV--GND---RV 221 (356)
Q Consensus 151 adavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~--~pnivGiK~s~--~d~---~i 221 (356)
+ ++--|.- + .+.++.+.+. .||+.= +...+++.+.++.+ .-.++-+|-+. |-. ++
T Consensus 217 i---~iEqP~~---~----~~~~~~l~~~~~iPIa~d------E~~~~~~~~~~~l~~~~~d~v~ik~~~~GGit~~~~i 280 (378)
T 3eez_A 217 V---MFEQPGE---T----LDDIAAIRPLHSAPVSVD------ECLVTLQDAARVARDGLAEVFGIKLNRVGGLTRAARM 280 (378)
T ss_dssp C---CEECCSS---S----HHHHHHTGGGCCCCEEEC------TTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHH
T ss_pred e---EEecCCC---C----HHHHHHHHhhCCCCEEEC------CCCCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHH
Confidence 6 3444543 2 3445777776 476652 23456888888874 46788899654 222 34
Q ss_pred hhhh-CCCeEEEecC
Q 018443 222 EHYT-GNGIVVWSGN 235 (356)
Q Consensus 222 ~~~~-~~~~~v~~G~ 235 (356)
..+. .-++.++.|.
T Consensus 281 a~~A~~~g~~~~~~~ 295 (378)
T 3eez_A 281 RDIALTHGIDMFVMA 295 (378)
T ss_dssp HHHHHHTTCEEEEEC
T ss_pred HHHHHHcCCEEEcCC
Confidence 3332 3466766543
No 394
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=71.11 E-value=8.2 Score=34.31 Aligned_cols=99 Identities=18% Similarity=0.165 Sum_probs=59.3
Q ss_pred eeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEE-EEecCCCCHHHHH
Q 018443 62 AIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKV-IGNTGSNSTREAI 140 (356)
Q Consensus 62 al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpV-i~gvg~~st~~ai 140 (356)
.++|-++..+..|+.. .++.+...+.|++|+++.++ ..+..+ .+.+..+. ..+ .-|++...-
T Consensus 109 ~vLts~s~~~~~~~~~-~~~a~~a~~~g~~GvV~sat--------~p~e~~---~ir~~~~~-~~~vtPGI~~~g~---- 171 (222)
T 4dbe_A 109 YLVAVMSHEGWSTLFA-DYIKNVIREISPKGIVVGGT--------KLDHIT---QYRRDFEK-MTIVSPGMGSQGG---- 171 (222)
T ss_dssp EEEEECSSTTCCCTTH-HHHHHHHHHHCCSEEEECTT--------CHHHHH---HHHHHCTT-CEEEECCBSTTSB----
T ss_pred EEEEeCCCcchHHHHH-HHHHHHHHHhCCCEEEECCC--------CHHHHH---HHHHhCCC-CEEEcCCcccCcc----
Confidence 3778887766655432 55666666789999976442 222222 23344444 443 348876521
Q ss_pred HHHHHHHHcCCCEEEEcCCCCCCCCHHH-HHHHHHHHHh
Q 018443 141 HATEQGFAVGMHAALHINPYYGKTSLEG-LISHFDSVLS 178 (356)
Q Consensus 141 ~lar~a~~~Gadavlv~pP~y~~~s~~~-l~~y~~~va~ 178 (356)
-.+.|.+.|+|.+++--|.+...++.+ ..++.+++.+
T Consensus 172 -tp~~a~~~Gad~iVVGR~I~~A~dP~~aa~~i~~~i~~ 209 (222)
T 4dbe_A 172 -SYGDAVCAGADYEIIGRSIYNAGNPLTALRTINKIIED 209 (222)
T ss_dssp -CTTHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHHHHH
T ss_pred -CHHHHHHcCCCEEEECHHhcCCCCHHHHHHHHHHHHHH
Confidence 134455699999999999888777644 4455555543
No 395
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=71.10 E-value=5.1 Score=35.46 Aligned_cols=86 Identities=15% Similarity=0.178 Sum_probs=50.4
Q ss_pred HHHHHHHHHHCCCCEEEEccCccccc--CCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHc---CCC
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQ--LMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAV---GMH 152 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~--~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~---Gad 152 (356)
....++.+.+.|++.+++.+.+-++. .... ++++.+.+.+ ++||++.=|-.+.++..+ +.++ |+|
T Consensus 148 ~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~----~~~~~i~~~~--~ipvia~GGI~~~~d~~~----~~~~~~~Gad 217 (244)
T 1vzw_A 148 LYETLDRLNKEGCARYVVTDIAKDGTLQGPNL----ELLKNVCAAT--DRPVVASGGVSSLDDLRA----IAGLVPAGVE 217 (244)
T ss_dssp HHHHHHHHHHTTCCCEEEEEC-------CCCH----HHHHHHHHTC--SSCEEEESCCCSHHHHHH----HHTTGGGTEE
T ss_pred HHHHHHHHHhCCCCEEEEeccCcccccCCCCH----HHHHHHHHhc--CCCEEEECCCCCHHHHHH----HHhhccCCCc
Confidence 34456677789999999877554332 2333 3334444443 589998544333454444 3444 999
Q ss_pred EEEEcCCCCCCC-CHHHHHHHH
Q 018443 153 AALHINPYYGKT-SLEGLISHF 173 (356)
Q Consensus 153 avlv~pP~y~~~-s~~~l~~y~ 173 (356)
++++..-.|..+ +.+++.++.
T Consensus 218 gv~vG~al~~~~~~~~~~~~~~ 239 (244)
T 1vzw_A 218 GAIVGKALYAKAFTLEEALEAT 239 (244)
T ss_dssp EEEECHHHHTTSSCHHHHHHHH
T ss_pred eeeeeHHHHcCCCCHHHHHHHh
Confidence 999987666443 666766664
No 396
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=71.01 E-value=53 Score=28.73 Aligned_cols=123 Identities=9% Similarity=-0.005 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHCCCCEEEEccCccc---ccCCCHHHHHHHHHHHHHHhCCCc-EEEEecC------C-C-----CHHHHH
Q 018443 77 AYDDLVNMQIVNGAEGMIVGGTTGE---GQLMSWDEHIMLIGHTVNCFGASV-KVIGNTG------S-N-----STREAI 140 (356)
Q Consensus 77 ~l~~~v~~li~~Gv~Gl~v~GstGE---~~~Lt~eEr~~li~~~~~~~~grv-pVi~gvg------~-~-----st~~ai 140 (356)
.+.+.++...+.|.+++=+...... ...++.++..++-+.+.+ . .+ .+.++.. + . +.+...
T Consensus 15 ~~~~~~~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--gl~~~~~h~~~~~~l~s~~~~r~~~~~~~~ 91 (270)
T 3aam_A 15 GVAGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREA-S--GGLPAVIHASYLVNLGAEGELWEKSVASLA 91 (270)
T ss_dssp HHHHHHHHHHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHHHHH-T--TCCCEEEECCTTCCTTCSSTHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHHHHH-c--CCceEEEecCcccCCCCCHHHHHHHHHHHH
Confidence 6788888888999999855332221 234667776666655443 2 23 3333321 1 1 233445
Q ss_pred HHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc------CCeEEEeCCCCCCCCC--CHHHHHHHhc-C
Q 018443 141 HATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM------GPTIIYNVPSRTGQDI--PPRVIHTMAQ-S 206 (356)
Q Consensus 141 ~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~------~PiilYn~P~~tG~~l--s~~~l~~La~-~ 206 (356)
+.++.|+++|+..+.+.+.++ +.+.+.+.++++++. ..+.+=|.|.. +..+ +++.+.+|.+ +
T Consensus 92 ~~i~~a~~lGa~~vv~h~g~~---~~~~~~~~l~~l~~~a~~~~gv~l~lEn~~~~-~~~~~~~~~~~~~l~~~v 162 (270)
T 3aam_A 92 DDLEKAALLGVEYVVVHPGSG---RPERVKEGALKALRLAGVRSRPVLLVENTAGG-GEKVGARFEELAWLVADT 162 (270)
T ss_dssp HHHHHHHHHTCCEEEECCCBS---CHHHHHHHHHHHHHHHTCCSSSEEEEECCCCC-TTBSCCSHHHHHHHHTTS
T ss_pred HHHHHHHHcCCCEEEECCCCC---CHHHHHHHHHHHHHhhcccCCCEEEEecCCCC-CCccCCCHHHHHHHHHhC
Confidence 666778899999998776655 347788888887643 35667777633 2233 8898999884 5
No 397
>2vg3_A Undecaprenyl pyrophosphate synthetase; transferase, cell WALL biogenesis/degradation, cell cycle, P transferase; HET: GPP; 1.8A {Mycobacterium tuberculosis} PDB: 2vg2_A* 2vg4_A
Probab=70.98 E-value=12 Score=34.76 Aligned_cols=104 Identities=13% Similarity=0.061 Sum_probs=69.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhC--------C--CcEEEEecCCC--CHHHHHH
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFG--------A--SVKVIGNTGSN--STREAIH 141 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~--------g--rvpVi~gvg~~--st~~ai~ 141 (356)
-.+.+++.++++.+.||.-+.+-.-+.|.+.=+.+|-..|++...+... . ++.+|...... ++.++++
T Consensus 84 G~~~l~~iv~~c~~lGI~~LTlYaFStENwkRp~~EV~~Lm~L~~~~l~~~~~~l~~~~vrvrviG~~~~lp~~~~~~i~ 163 (284)
T 2vg3_A 84 GEAVVIDIACGAIELGIKWLSLYAFSTENWKRSPEEVRFLMGFNRDVVRRRRDTLKKLGVRIRWVGSRPRLWRSVINELA 163 (284)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEEETTGGGSCHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEESCCTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeccCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEeCChhhCCHHHHHHHH
Confidence 4588999999999999999999998899999999998888776544321 2 33344323221 3445555
Q ss_pred HHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc
Q 018443 142 ATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM 179 (356)
Q Consensus 142 lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~ 179 (356)
.++..-+..-.-.+.+.=.|. +.++|++-.+.+++.
T Consensus 164 ~ae~~T~~n~~l~Lnia~~Yg--GR~EIv~A~r~la~~ 199 (284)
T 2vg3_A 164 VAEEMTKSNDVITINYCVNYG--GRTEITEATREIARE 199 (284)
T ss_dssp HHHHHHTTCCSEEEEEEEEEC--HHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCceEEEEEecCC--CHHHHHHHHHHHHHH
Confidence 555444333333443332343 679999999999875
No 398
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=70.82 E-value=61 Score=29.63 Aligned_cols=81 Identities=11% Similarity=0.060 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccCcccccCCC-HHHHHHHHHHHHHHhCCCcE--EEEecCCCCHHHHHHHHHHHHHc--
Q 018443 75 LEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMS-WDEHIMLIGHTVNCFGASVK--VIGNTGSNSTREAIHATEQGFAV-- 149 (356)
Q Consensus 75 ~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt-~eEr~~li~~~~~~~~grvp--Vi~gvg~~st~~ai~lar~a~~~-- 149 (356)
+++....+++|++.|..-|.+.+.... ..+ ..+|.+-+..+.+..+-... +....+..+.++..+.++...+.
T Consensus 172 ~~~~~~a~~~L~~~G~r~I~~i~~~~~--~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~ 249 (355)
T 3e3m_A 172 ERAAYDMTNALLARGFRKIVFLGEKDD--DWTRGAARRAGFKRAMREAGLNPDQEIRLGAPPLSIEDGVAAAELILQEYP 249 (355)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEESSC--TTSHHHHHHHHHHHHHHHTTSCSCCEEEESCSSCCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHCCCCeEEEEccCcc--cChhHHHHHHHHHHHHHHCCcCCCccEEEecCCCCHHHHHHHHHHHHcCCC
Confidence 455566666666666655544332211 123 45666666655554432222 23333344455555555444332
Q ss_pred CCCEEEEc
Q 018443 150 GMHAALHI 157 (356)
Q Consensus 150 Gadavlv~ 157 (356)
..||+++.
T Consensus 250 ~~~ai~~~ 257 (355)
T 3e3m_A 250 DTDCIFCV 257 (355)
T ss_dssp TCCEEEES
T ss_pred CCcEEEEC
Confidence 35665553
No 399
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=70.75 E-value=15 Score=34.73 Aligned_cols=88 Identities=8% Similarity=-0.051 Sum_probs=56.0
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEc-cCccccc-CCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHH
Q 018443 71 GRFDLEAYDDLVNMQIVNGAEGMIVG-GTTGEGQ-LMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFA 148 (356)
Q Consensus 71 g~ID~~~l~~~v~~li~~Gv~Gl~v~-GstGE~~-~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~ 148 (356)
+..+.+....+++.+.+.|++.|-+. |.+.+.. .....-...+++.+.+.+ ++|||++=+-.+.++ ++.+.+
T Consensus 224 ~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~--~iPVi~~GgI~s~e~----a~~~L~ 297 (340)
T 3gr7_A 224 DGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA--DIPTGAVGLITSGWQ----AEEILQ 297 (340)
T ss_dssp TSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT--TCCEEEESSCCCHHH----HHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc--CCcEEeeCCCCCHHH----HHHHHH
Confidence 45788889999999999999999874 4433210 001111345666666666 578876433334444 344555
Q ss_pred cC-CCEEEEcCCCCCCC
Q 018443 149 VG-MHAALHINPYYGKT 164 (356)
Q Consensus 149 ~G-adavlv~pP~y~~~ 164 (356)
.| ||.|++.-+....|
T Consensus 298 ~G~aD~V~iGR~~lanP 314 (340)
T 3gr7_A 298 NGRADLVFLGRELLRNP 314 (340)
T ss_dssp TTSCSEEEECHHHHHCT
T ss_pred CCCeeEEEecHHHHhCc
Confidence 67 99999987766544
No 400
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=70.58 E-value=28 Score=32.01 Aligned_cols=130 Identities=14% Similarity=0.097 Sum_probs=71.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEE-----------ecCCCCHHHHHH
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG-----------NTGSNSTREAIH 141 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~-----------gvg~~st~~ai~ 141 (356)
-|.+...+.++.+++.+++|+++.+... +. ..++.+. ..++|++. .|+....+-+-.
T Consensus 110 ~~~~~~~~~~~~l~~~~vdGiI~~~~~~-----~~----~~~~~l~---~~~iPvV~i~~~~~~~~~~~V~~D~~~~~~~ 177 (355)
T 3e3m_A 110 YSPEREEQLVETMLRRRPEAMVLSYDGH-----TE----QTIRLLQ---RASIPIVEIWEKPAHPIGHTVGFSNERAAYD 177 (355)
T ss_dssp TCHHHHHHHHHHHHHTCCSEEEEECSCC-----CH----HHHHHHH---HCCSCEEEESSCCSSCSSEEEECCHHHHHHH
T ss_pred CChHHHHHHHHHHHhCCCCEEEEeCCCC-----CH----HHHHHHH---hCCCCEEEECCccCCCCCCEEEeChHHHHHH
Confidence 3667778899999999999999876532 22 2222222 23567653 233445666777
Q ss_pred HHHHHHHcCCCEEEEcCCCCC-CC-CHHHHHHHHHHHHhc-CC---eEEEeCCCCCCCCCCHHHHHHHh-cCCCEEEEee
Q 018443 142 ATEQGFAVGMHAALHINPYYG-KT-SLEGLISHFDSVLSM-GP---TIIYNVPSRTGQDIPPRVIHTMA-QSPNLAGVKE 214 (356)
Q Consensus 142 lar~a~~~Gadavlv~pP~y~-~~-s~~~l~~y~~~va~~-~P---iilYn~P~~tG~~ls~~~l~~La-~~pnivGiK~ 214 (356)
.+++..+.|..-+.++..... .. ..+-...|.+++.+. .+ .+.+..+..+ ..-..+.+.++. +.|.+.+|=-
T Consensus 178 a~~~L~~~G~r~I~~i~~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~~~~~ai~~ 256 (355)
T 3e3m_A 178 MTNALLARGFRKIVFLGEKDDDWTRGAARRAGFKRAMREAGLNPDQEIRLGAPPLS-IEDGVAAAELILQEYPDTDCIFC 256 (355)
T ss_dssp HHHHHHHTTCCSEEEEEESSCTTSHHHHHHHHHHHHHHHTTSCSCCEEEESCSSCC-HHHHHHHHHHHHHHCTTCCEEEE
T ss_pred HHHHHHHCCCCeEEEEccCcccChhHHHHHHHHHHHHHHCCcCCCccEEEecCCCC-HHHHHHHHHHHHcCCCCCcEEEE
Confidence 788889999877665543222 22 244455555555554 33 3333221111 111124555555 4666666554
Q ss_pred c
Q 018443 215 C 215 (356)
Q Consensus 215 s 215 (356)
.
T Consensus 257 ~ 257 (355)
T 3e3m_A 257 V 257 (355)
T ss_dssp S
T ss_pred C
Confidence 3
No 401
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=70.49 E-value=12 Score=35.62 Aligned_cols=91 Identities=10% Similarity=-0.072 Sum_probs=56.5
Q ss_pred cCCCCCCCHHHHHHHHHHHHHCCCCEEEEccC-cccccCC--CHHHHHHHHHHHHHHhCCCcEEEEecCCC-CHHHHHHH
Q 018443 67 YLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGT-TGEGQLM--SWDEHIMLIGHTVNCFGASVKVIGNTGSN-STREAIHA 142 (356)
Q Consensus 67 f~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~Gs-tGE~~~L--t~eEr~~li~~~~~~~~grvpVi~gvg~~-st~~ai~l 142 (356)
|.+.|+.+.+....+++.+.+.|++.|-+.+. +.+.... .......+++.+.+.+ ++|||++ |.. +.++
T Consensus 237 ~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~-GgI~s~e~---- 309 (363)
T 3l5l_A 237 YDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREA--KLPVTSA-WGFGTPQL---- 309 (363)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH--TCCEEEC-SSTTSHHH----
T ss_pred cCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHc--CCcEEEe-CCCCCHHH----
Confidence 33344478888999999999999999977642 2221111 1111345566666666 5788754 444 3433
Q ss_pred HHHHHHcC-CCEEEEcCCCCCCC
Q 018443 143 TEQGFAVG-MHAALHINPYYGKT 164 (356)
Q Consensus 143 ar~a~~~G-adavlv~pP~y~~~ 164 (356)
++.+.+.| +|.|++.-++...|
T Consensus 310 a~~~l~~G~aD~V~iGR~~lanP 332 (363)
T 3l5l_A 310 AEAALQANQLDLVSVGRAHLADP 332 (363)
T ss_dssp HHHHHHTTSCSEEECCHHHHHCT
T ss_pred HHHHHHCCCccEEEecHHHHhCc
Confidence 44555667 99999887765444
No 402
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=70.48 E-value=13 Score=33.94 Aligned_cols=65 Identities=18% Similarity=0.224 Sum_probs=46.2
Q ss_pred CCcEE--EEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCC------------------CCHHHHHHHHHHHHhc--C
Q 018443 123 ASVKV--IGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGK------------------TSLEGLISHFDSVLSM--G 180 (356)
Q Consensus 123 grvpV--i~gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~~------------------~s~~~l~~y~~~va~~--~ 180 (356)
++..+ ++-.|..+.+.+++.++..++. +|++.+-.||.-+ .+-+.+++..+++.+. .
T Consensus 14 ~~~~li~~i~~GdP~~~~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~~ 92 (271)
T 1ujp_A 14 GRAALIPYLTAGFPSREGFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALTEK 92 (271)
T ss_dssp TBCEEEEEEETTSSCHHHHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCS
T ss_pred CCceEEEEecCCCCChHHHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC
Confidence 45343 3356889999999999999999 9999999998633 2334455566666554 6
Q ss_pred CeEE--EeCC
Q 018443 181 PTII--YNVP 188 (356)
Q Consensus 181 Piil--Yn~P 188 (356)
|+++ |.+|
T Consensus 93 Pii~m~y~n~ 102 (271)
T 1ujp_A 93 PLFLMTYLNP 102 (271)
T ss_dssp CEEEECCHHH
T ss_pred CEEEEecCcH
Confidence 9988 6555
No 403
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=70.44 E-value=76 Score=30.22 Aligned_cols=145 Identities=11% Similarity=0.032 Sum_probs=96.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHHHHHHHHHHcCC
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 151 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai~lar~a~~~Ga 151 (356)
.+.+.+.+.+....+.|.+++=+-... -+.++=.+.++.+.+.++.++++.+-+ ++.+.++++++++..++.|+
T Consensus 174 ~~~e~~~~~a~~~~~~Gf~~vKik~g~-----~~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~~ai~~~~~l~~~~i 248 (398)
T 2pp0_A 174 TPLDQVLKNVVISRENGIGGIKLKVGQ-----PNCAEDIRRLTAVREALGDEFPLMVDANQQWDRETAIRMGRKMEQFNL 248 (398)
T ss_dssp SCHHHHHHHHHHHHHTTCSCEEEECCC-----SCHHHHHHHHHHHHHHHCSSSCEEEECTTCSCHHHHHHHHHHHGGGTC
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEecCC-----CCHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 478889999999999999998653221 135666777888888888888988865 45689999999999999998
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEEEeecC--chh---hHh
Q 018443 152 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV--GND---RVE 222 (356)
Q Consensus 152 davlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~--~pnivGiK~s~--~d~---~i~ 222 (356)
+.+ --|.- +. =.+.++.+.+. .||+.=. .-.+++.++++.+ .-+++-+|-+- +-. ++.
T Consensus 249 ~~i--EqP~~--~~---d~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~ 315 (398)
T 2pp0_A 249 IWI--EEPLD--AY---DIEGHAQLAAALDTPIATGE------MLTSFREHEQLILGNASDFVQPDAPRVGGISPFLKIM 315 (398)
T ss_dssp SCE--ECCSC--TT---CHHHHHHHHHHCSSCEEECT------TCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHHHH
T ss_pred cee--eCCCC--hh---hHHHHHHHHhhCCCCEEecC------CcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHH
Confidence 854 33431 11 14455667665 5776543 2346788888863 56888888653 222 333
Q ss_pred hhh-CCCeEEEecC
Q 018443 223 HYT-GNGIVVWSGN 235 (356)
Q Consensus 223 ~~~-~~~~~v~~G~ 235 (356)
++. ..++.++.+.
T Consensus 316 ~~A~~~gi~~~~h~ 329 (398)
T 2pp0_A 316 DLAAKHGRKLAPHF 329 (398)
T ss_dssp HHHHHTTCEECCCS
T ss_pred HHHHHcCCeEeecC
Confidence 332 2456665543
No 404
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=70.42 E-value=33 Score=30.36 Aligned_cols=73 Identities=12% Similarity=0.090 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHhCCCcEEEE-ecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEe
Q 018443 109 EHIMLIGHTVNCFGASVKVIG-NTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYN 186 (356)
Q Consensus 109 Er~~li~~~~~~~~grvpVi~-gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn 186 (356)
+-.+-++..++..+ ..++. ..+..+.++..+..+.+.+.++||+++.+... +.....++.+.+. .|+++++
T Consensus 21 ~~~~gi~~~a~~~g--~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~-----~~~~~~~~~~~~~~iPvV~~~ 93 (305)
T 3g1w_A 21 RCLKGFEDAAQALN--VTVEYRGAAQYDIQEQITVLEQAIAKNPAGIAISAIDP-----VELTDTINKAVDAGIPIVLFD 93 (305)
T ss_dssp HHHHHHHHHHHHHT--CEEEEEECSSSCHHHHHHHHHHHHHHCCSEEEECCSST-----TTTHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHHcC--CEEEEeCCCcCCHHHHHHHHHHHHHhCCCEEEEcCCCH-----HHHHHHHHHHHHCCCcEEEEC
Confidence 33444444444443 34444 56667888889999999999999999876432 2233455666665 7999998
Q ss_pred CC
Q 018443 187 VP 188 (356)
Q Consensus 187 ~P 188 (356)
.+
T Consensus 94 ~~ 95 (305)
T 3g1w_A 94 SG 95 (305)
T ss_dssp SC
T ss_pred CC
Confidence 64
No 405
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=70.42 E-value=38 Score=30.72 Aligned_cols=77 Identities=10% Similarity=0.070 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHcCCCEEEEcCCCCC-------C--C---CH---HHHHHHHHHHHhc-----CCeEEEeCCCCCCCCCCH
Q 018443 138 EAIHATEQGFAVGMHAALHINPYYG-------K--T---SL---EGLISHFDSVLSM-----GPTIIYNVPSRTGQDIPP 197 (356)
Q Consensus 138 ~ai~lar~a~~~Gadavlv~pP~y~-------~--~---s~---~~l~~y~~~va~~-----~PiilYn~P~~tG~~ls~ 197 (356)
...+.++.|+++|+..+.+.+.... . + .+ +.+.+.++.+++. +.+.+-|.|... .-++
T Consensus 112 ~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~--~~~~ 189 (340)
T 2zds_A 112 EIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVRFAHEVHPSEI--AYDY 189 (340)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEECCTTSS--CCSH
T ss_pred HHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHcCCEEEEEcCCCcc--cCCH
Confidence 4456678888999999988643221 0 0 11 2355566666542 467788877432 2367
Q ss_pred HHHHHHhc----CCCEEEEeecCc
Q 018443 198 RVIHTMAQ----SPNLAGVKECVG 217 (356)
Q Consensus 198 ~~l~~La~----~pnivGiK~s~~ 217 (356)
+.+.+|.+ .|| +|+=...+
T Consensus 190 ~~~~~ll~~v~~~~~-vg~~~D~~ 212 (340)
T 2zds_A 190 WTTHRALEAVGHRPA-FGLNFDPS 212 (340)
T ss_dssp HHHHHHHHHTTTCTT-EEEEECCH
T ss_pred HHHHHHHHhcCCCCC-eeEEEchh
Confidence 77777763 467 45544333
No 406
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=70.36 E-value=79 Score=30.43 Aligned_cols=130 Identities=8% Similarity=-0.004 Sum_probs=90.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccccc-CCCHHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHHHHHHHHHHcCC
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQ-LMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 151 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~-~Lt~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai~lar~a~~~Ga 151 (356)
|.+.+.+.++..++.|.+++=+-...|-.. .-..++=.+.++.+.+.++.++++++=+ ++-+.++++++++..++.|+
T Consensus 179 ~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG~d~~L~vDaN~~~~~~~Ai~~~~~Le~~~i 258 (412)
T 3stp_A 179 SIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIGYDNDLMLECYMGWNLDYAKRMLPKLAPYEP 258 (412)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCC
Confidence 788999999999999999986643332100 0023455677888888888899998865 55689999999999999998
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEEEeecC
Q 018443 152 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV 216 (356)
Q Consensus 152 davlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~--~pnivGiK~s~ 216 (356)
+.+= -|.- +. . .+.+++|.+. .||+.=. ...++..++++.+ .-.++-+|-+-
T Consensus 259 ~~iE--eP~~--~~--d-~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~li~~~a~D~v~ik~~~ 314 (412)
T 3stp_A 259 RWLE--EPVI--AD--D-VAGYAELNAMNIVPISGGE------HEFSVIGCAELINRKAVSVLQYDTNR 314 (412)
T ss_dssp SEEE--CCSC--TT--C-HHHHHHHHHTCSSCEEECT------TCCSHHHHHHHHHTTCCSEECCCHHH
T ss_pred CEEE--CCCC--cc--c-HHHHHHHHhCCCCCEEeCC------CCCCHHHHHHHHHcCCCCEEecChhh
Confidence 7663 3432 11 1 3455777776 5766532 3356888888874 45778788643
No 407
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=70.29 E-value=16 Score=34.53 Aligned_cols=72 Identities=11% Similarity=-0.020 Sum_probs=46.7
Q ss_pred HHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHH----HHHHHhCC-CcEEEEecCCCCHHHHHHHHHHHHHcCCC
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIG----HTVNCFGA-SVKVIGNTGSNSTREAIHATEQGFAVGMH 152 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~----~~~~~~~g-rvpVi~gvg~~st~~ai~lar~a~~~Gad 152 (356)
+.++++.++++|+++|.+.-+.|. .||.++..+.+. .+++.++. .+|++..+.++ .. +.....+.|+|
T Consensus 195 ~~~~~~~~~~aGad~i~i~D~~~~--~lsp~~f~ef~~p~~~~i~~~i~~~g~~~i~~~~G~--~~---~l~~l~~~g~d 267 (359)
T 2inf_A 195 IIVYVKAQIKAGAKAIQIFDSWVG--ALNQADYRTYIKPVMNRIFSELAKENVPLIMFGVGA--SH---LAGDWHDLPLD 267 (359)
T ss_dssp HHHHHHHHHHTTCSEEEEECTTGG--GSCHHHHHHHTHHHHHHHHHHHGGGCSCEEEECTTC--GG---GHHHHHTSSCS
T ss_pred HHHHHHHHHHhCCCEEEEeCCccc--cCCHHHHHHHhHHHHHHHHHHHHHcCCcEEEEcCCc--HH---HHHHHHHhCCC
Confidence 344566778899999998877664 799887766543 33444432 36777765544 22 34445678999
Q ss_pred EEEE
Q 018443 153 AALH 156 (356)
Q Consensus 153 avlv 156 (356)
++-+
T Consensus 268 ~~~~ 271 (359)
T 2inf_A 268 VVGL 271 (359)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 7764
No 408
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=70.15 E-value=18 Score=31.72 Aligned_cols=123 Identities=8% Similarity=0.009 Sum_probs=64.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHH-HHHHHhCCCcEEEE---------ecCCCCHHHHHHHH
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIG-HTVNCFGASVKVIG---------NTGSNSTREAIHAT 143 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~-~~~~~~~grvpVi~---------gvg~~st~~ai~la 143 (356)
|.+...++++.+++.+++|+++.+. +.+. ++ .+. ..++||+. .|+....+-.-..+
T Consensus 49 ~~~~~~~~~~~l~~~~~dgiIi~~~-------~~~~----~~~~l~---~~~iPvV~~~~~~~~~~~V~~D~~~~g~~a~ 114 (277)
T 3e61_A 49 DIKKAQGYLATFVSHNCTGMISTAF-------NENI----IENTLT---DHHIPFVFIDRINNEHNGISTNHFKGGQLQA 114 (277)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECGG-------GHHH----HHHHHH---HC-CCEEEGGGCC---------HHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCEEEEecC-------ChHH----HHHHHH---cCCCCEEEEeccCCCCCeEEechHHHHHHHH
Confidence 6778889999999999999999772 2221 32 222 23567654 24444555667777
Q ss_pred HHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHH-hc-CCeE-EEeCCCCCCCCCCHHHHHHHhcCCCEEEEeec
Q 018443 144 EQGFAVGMHAALHINPYYGKTSLEGLISHFDSVL-SM-GPTI-IYNVPSRTGQDIPPRVIHTMAQSPNLAGVKEC 215 (356)
Q Consensus 144 r~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va-~~-~Pii-lYn~P~~tG~~ls~~~l~~La~~pnivGiK~s 215 (356)
++..+.|...+.++.......+..+-.+-|++.. +. .++. ++.. .... .+....|.+.|.+.+|=-.
T Consensus 115 ~~L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~----~~~~-~~~~~~l~~~~~~~ai~~~ 184 (277)
T 3e61_A 115 EVVRKGKGKNVLIVHENLLIDAFHQRVQGIKYILDQQRIDYKMLEAT----LLDN-DKKFIDLIKELSIDSIICS 184 (277)
T ss_dssp HHHHHTTCCSEEEEESCTTSHHHHHHHHHHHHHHHC---CEEEEEGG----GGGS-HHHHHHHHHHHTCCEEEES
T ss_pred HHHHHCCCCeEEEEeCCCCCccHHHHHHHHHHHHHHcCCCccceecC----CCCH-HHHHHHhhcCCCCCEEEEC
Confidence 8888899877766643322223333344444444 43 3443 2221 1111 2333335555666666544
No 409
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=70.10 E-value=58 Score=28.76 Aligned_cols=95 Identities=13% Similarity=0.147 Sum_probs=52.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHc----
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAV---- 149 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~---- 149 (356)
|+++.+..+++|++.|..-|.+.+... ..-+..+|.+-+..+.+..+-...++ .+..+.++..+.++...+.
T Consensus 115 ~~~~~~~a~~~L~~~G~~~I~~i~~~~--~~~~~~~R~~Gf~~al~~~g~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~ 190 (295)
T 3hcw_A 115 NILASENLTRHVIEQGVDELIFITEKG--NFEVSKDRIQGFETVASQFNLDYQII--ETSNEREVILNYMQNLHTRLKDP 190 (295)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEEEESS--CCHHHHHHHHHHHHHHHHTTCEEEEE--EECSCHHHHHHHHHHHHHHHTCT
T ss_pred cHHHHHHHHHHHHHcCCccEEEEcCCc--cchhHHHHHHHHHHHHHHcCCCeeEE--eccCCHHHHHHHHHHHHhhcccC
Confidence 456777777888888877765554322 23356677777777666553332222 2334555555555554432
Q ss_pred -CCCEEEEcCCCCCCCCHHHHHHHHHHHHhc
Q 018443 150 -GMHAALHINPYYGKTSLEGLISHFDSVLSM 179 (356)
Q Consensus 150 -Gadavlv~pP~y~~~s~~~l~~y~~~va~~ 179 (356)
..++++.. ++.-...-++++.+.
T Consensus 191 ~~~~ai~~~-------~d~~A~g~~~al~~~ 214 (295)
T 3hcw_A 191 NIKQAIISL-------DAMLHLAILSVLYEL 214 (295)
T ss_dssp TSCEEEEES-------SHHHHHHHHHHHHHT
T ss_pred CCCcEEEEC-------ChHHHHHHHHHHHHc
Confidence 46676653 343334444555443
No 410
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=69.97 E-value=14 Score=36.34 Aligned_cols=74 Identities=15% Similarity=0.183 Sum_probs=42.2
Q ss_pred HHHHHCCCCEEEEccCcccccCCCHHH-------HHHHHHHHHHHh-CCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEE
Q 018443 83 NMQIVNGAEGMIVGGTTGEGQLMSWDE-------HIMLIGHTVNCF-GASVKVIGNTGSNSTREAIHATEQGFAVGMHAA 154 (356)
Q Consensus 83 ~~li~~Gv~Gl~v~GstGE~~~Lt~eE-------r~~li~~~~~~~-~grvpVi~gvg~~st~~ai~lar~a~~~Gadav 154 (356)
..+++.|++++.+.-..| ...+... ....+..+++.+ ..++|||+.=|-.+..+..+ |.++|||++
T Consensus 289 ~~~~~~Gad~I~vg~g~g--~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~k----al~~GA~~v 362 (491)
T 1zfj_A 289 RALYDAGVDVVKVGIGPG--SICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVK----ALAAGGNAV 362 (491)
T ss_dssp HHHHHTTCSEEEECSSCC--TTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHH----HHHTTCSEE
T ss_pred HHHHHcCCCEEEECccCC--cceEEeeecCCCCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHH----HHHcCCcce
Confidence 357789999998841111 0001000 112222233322 23789999655555666554 445799999
Q ss_pred EEcCCCCC
Q 018443 155 LHINPYYG 162 (356)
Q Consensus 155 lv~pP~y~ 162 (356)
++-.|++.
T Consensus 363 ~vG~~~~~ 370 (491)
T 1zfj_A 363 MLGSMFAG 370 (491)
T ss_dssp EESTTTTT
T ss_pred eeCHHhhC
Confidence 99998874
No 411
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=69.70 E-value=77 Score=30.18 Aligned_cols=123 Identities=9% Similarity=-0.038 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHCCCCEEEE--ccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCC-CHHHHHHHHHHHHHcCCC
Q 018443 77 AYDDLVNMQIVNGAEGMIV--GGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSN-STREAIHATEQGFAVGMH 152 (356)
Q Consensus 77 ~l~~~v~~li~~Gv~Gl~v--~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv-g~~-st~~ai~lar~a~~~Gad 152 (356)
.+.+.++.+.+.|...+=+ .|..+ .+.++=.+.++.+.+.++.++++.+-. ++. +.++++++++..++.|++
T Consensus 155 ~~~~~a~~~~~~G~~~~K~~k~g~~~----~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~~~~A~~~~~~L~~~~i~ 230 (394)
T 3mqt_A 155 AYKPLIAKAKERGAKAVKVCIIPNDK----VSDKEIVAYLRELREVIGWDMDMMVDCLYRWTDWQKARWTFRQLEDIDLY 230 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCTT----SCHHHHHHHHHHHHHHHCSSSEEEEECTTCCSCHHHHHHHHHHTGGGCCS
T ss_pred HHHHHHHHHHHcCCCEEEecccCCCc----cCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHHHHHhhcCCe
Confidence 6667888889999999865 33211 256777888999999998899999876 345 789999999999999988
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEEEeecC
Q 018443 153 AALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV 216 (356)
Q Consensus 153 avlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~--~pnivGiK~s~ 216 (356)
.+= -|.. ..+ .+.+++|.+. .||+.=. ...+++.+.++.+ .-.++-+|-+-
T Consensus 231 ~iE--eP~~-~~~----~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~l~~~~~d~v~~k~~~ 285 (394)
T 3mqt_A 231 FIE--ACLQ-HDD----LIGHQKLAAAINTRLCGAE------MSTTRFEAQEWLEKTGISVVQSDYNR 285 (394)
T ss_dssp EEE--SCSC-TTC----HHHHHHHHHHSSSEEEECT------TCCHHHHHHHHHHHHCCSEECCCTTT
T ss_pred EEE--CCCC-ccc----HHHHHHHHhhCCCCEEeCC------CcCCHHHHHHHHHcCCCCeEecCccc
Confidence 663 3432 112 3456777776 4665432 2345777888773 56788888765
No 412
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=69.66 E-value=12 Score=34.33 Aligned_cols=131 Identities=9% Similarity=0.139 Sum_probs=72.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEE-e---------cCCCCHHHHHHH
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG-N---------TGSNSTREAIHA 142 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~-g---------vg~~st~~ai~l 142 (356)
-|.+...++++.+++.+++|+++.+..... + .++.+. ..++|++. + |+....+-.-..
T Consensus 102 ~~~~~~~~~~~~l~~~~vdGiIi~~~~~~~------~---~~~~l~---~~~iPvV~~~~~~~~~~~~V~~D~~~~~~~a 169 (339)
T 3h5o_A 102 YDAGQELQLLRAYLQHRPDGVLITGLSHAE------P---FERILS---QHALPVVYMMDLADDGRCCVGFSQEDAGAAI 169 (339)
T ss_dssp TCHHHHHHHHHHHHTTCCSEEEEECSCCCT------T---HHHHHH---HTTCCEEEEESCCSSSCCEEECCHHHHHHHH
T ss_pred CChHHHHHHHHHHHcCCCCEEEEeCCCCCH------H---HHHHHh---cCCCCEEEEeecCCCCCeEEEECHHHHHHHH
Confidence 466778889999999999999988754321 1 222222 23566543 2 334456667777
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-C--C--eEEEeCCCCCCCCCCHHHHHHHh-cCCCEEEEeecC
Q 018443 143 TEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-G--P--TIIYNVPSRTGQDIPPRVIHTMA-QSPNLAGVKECV 216 (356)
Q Consensus 143 ar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~--P--iilYn~P~~tG~~ls~~~l~~La-~~pnivGiK~s~ 216 (356)
+++..+.|..-+.++.+.....+.+-...|.+++.+. . + .+++..+ ....-..+.+.++. +.|.+.+|= +.
T Consensus 170 ~~~L~~~G~~~I~~i~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~~~~~ai~-~~ 246 (339)
T 3h5o_A 170 TRHLLSRGKRRIGFLGAQLDERVMKRLDGYRAALDAADCRDAGLEWLDPQP--SSMQMGADMLDRALAERPDCDALF-CC 246 (339)
T ss_dssp HHHHHHTTCCSEEEEEESCCHHHHHHHHHHHHHHHHTTCCCGGGEEEECSC--CCHHHHHHHHHHHHHHCTTCCEEE-ES
T ss_pred HHHHHHCCCCeEEEEeCCCCccHHHHHHHHHHHHHHCCCCCCChheEecCC--CCHHHHHHHHHHHHcCCCCCcEEE-EC
Confidence 8888899987765554332222334444455555554 3 1 2333211 11111234566665 467766664 34
Q ss_pred ch
Q 018443 217 GN 218 (356)
Q Consensus 217 ~d 218 (356)
+|
T Consensus 247 nD 248 (339)
T 3h5o_A 247 ND 248 (339)
T ss_dssp SH
T ss_pred Ch
Confidence 44
No 413
>3ugs_B Undecaprenyl pyrophosphate synthase; niaid, csgid, structural genomics, center for structural GEN infectious diseases; HET: FFT; 2.46A {Campylobacter jejuni} SCOP: c.101.1.0
Probab=69.60 E-value=26 Score=31.31 Aligned_cols=119 Identities=13% Similarity=0.153 Sum_probs=80.0
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHh--------CC--CcEEEEecCCC--CHHHH
Q 018443 72 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCF--------GA--SVKVIGNTGSN--STREA 139 (356)
Q Consensus 72 ~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~--------~g--rvpVi~gvg~~--st~~a 139 (356)
+-=.+.+++.++++.+.||.-+.+-.-+-|.+.=+.+|-..|++...+.. .. |+.+|.-.... ++.+.
T Consensus 33 ~~G~~~~~~i~~~c~~lGI~~lTlYaFStENw~Rp~~EV~~Lm~L~~~~l~~~~~~l~~~~vrvr~iGd~~~Lp~~~~~~ 112 (225)
T 3ugs_B 33 SQGVKTMQKLMEVCMEENISNLSLFAFSTENWKRPKDEIDFIFELLDRCLDEALEKFEKNNVRLRAIGDLSRLEDKVREK 112 (225)
T ss_dssp CHHHHHHHHHHHHHHHTTCCEEEEEEEESGGGGSCHHHHHHHHHHHHHHHHHHHHHSTTTTEEEEEESCGGGSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEEEEcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEEEeChHhCCHHHHHH
Confidence 44468899999999999999999999999999999999998887776543 12 33344333322 34445
Q ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHHHh
Q 018443 140 IHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHTMA 204 (356)
Q Consensus 140 i~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~~PiilYn~P~~tG~~ls~~~l~~La 204 (356)
++.++..-+..-...+.+.=.|. +.+||.+-.+.+++.. -+++.+++.+-.
T Consensus 113 i~~ae~~T~~n~~~~lnia~~Yg--gR~EI~~A~~~iv~~g------------~~I~e~~i~~~L 163 (225)
T 3ugs_B 113 ITLVEEKTKHCDALCVNLAISYG--ARDEIIRAAKRVIEKK------------LELNEENLTQNL 163 (225)
T ss_dssp HHHHHHHHTTCCSEEEEEEEEEC--HHHHHHHHHHHHHHTT------------CCCSHHHHHHTS
T ss_pred HHHHHHHhcCCCCcEEEEeeCCC--CHHHHHHHHHHHHHhc------------CcCCHHHHHHhc
Confidence 55555444333333343333343 6899999999985543 468888776643
No 414
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=69.50 E-value=16 Score=32.16 Aligned_cols=83 Identities=13% Similarity=0.136 Sum_probs=46.6
Q ss_pred HHHHC--CCCEEEEc----cCcccccCCCHHHHHHHHHHHHHHhCCCcEEEE--ecCCCCHHHHHHHHHHHHHcCCCEEE
Q 018443 84 MQIVN--GAEGMIVG----GTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG--NTGSNSTREAIHATEQGFAVGMHAAL 155 (356)
Q Consensus 84 ~li~~--Gv~Gl~v~----GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~--gvg~~st~~ai~lar~a~~~Gadavl 155 (356)
.+.+. +++-+++. |++|+ .+.++ -.+-++.+.+... ++|+++ |++..+..+. .++|+|++.
T Consensus 131 ~~~~~~~~~d~vl~~sv~pg~~g~--~~~~~-~l~~i~~~~~~~~-~~pi~v~GGI~~~ni~~~-------~~aGaD~vv 199 (228)
T 1h1y_A 131 PLVEAENPVELVLVMTVEPGFGGQ--KFMPE-MMEKVRALRKKYP-SLDIEVDGGLGPSTIDVA-------ASAGANCIV 199 (228)
T ss_dssp HHHHSSSCCSEEEEESSCTTCSSC--CCCGG-GHHHHHHHHHHCT-TSEEEEESSCSTTTHHHH-------HHHTCCEEE
T ss_pred HHHhcCCCCCEEEEEeecCCCCcc--cCCHH-HHHHHHHHHHhcC-CCCEEEECCcCHHHHHHH-------HHcCCCEEE
Confidence 34454 88988772 44453 33322 2222444445442 567654 5655443333 233999999
Q ss_pred EcCCCCCCCCHHHHHHHHHHHH
Q 018443 156 HINPYYGKTSLEGLISHFDSVL 177 (356)
Q Consensus 156 v~pP~y~~~s~~~l~~y~~~va 177 (356)
+..-.+...+.++-.+-+++..
T Consensus 200 vGsai~~~~d~~~~~~~l~~~~ 221 (228)
T 1h1y_A 200 AGSSIFGAAEPGEVISALRKSV 221 (228)
T ss_dssp ESHHHHTSSCHHHHHHHHHHHH
T ss_pred ECHHHHCCCCHHHHHHHHHHHH
Confidence 9976666666666666665544
No 415
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=69.30 E-value=29 Score=31.37 Aligned_cols=123 Identities=9% Similarity=-0.027 Sum_probs=70.1
Q ss_pred HHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEc
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~ 157 (356)
.+.+++.+-+.||+..++.+..-.. .+-..+++.+ +...+++--++|+--.... +..++..+.|+-||-+.
T Consensus 55 ~e~~l~~~~~~GV~~~V~v~~~~~~-----~~n~~~~~~~-~~~p~r~~g~~~v~P~~~~---~eL~~l~~~gv~Gi~l~ 125 (294)
T 4i6k_A 55 VQSFISHLDEHNFTHGVLVQPSFLG-----TNNQAMLNAI-QQYPDRLKGIAVVQHTTTF---NELVNLKAQGIVGVRLN 125 (294)
T ss_dssp HHHHHHHHHHTTCCEEEEECCGGGT-----TCCHHHHHHH-HHSTTTEEEEECCCTTCCH---HHHHHHHTTTEEEEEEE
T ss_pred HHHHHHHHHHcCCCeEEEecCcccc-----cchHHHHHHH-HHCCCeEEEEEEeCCcccH---HHHHHHHHCCCcEEEec
Confidence 4566667778999998887654321 1223344433 3345666555666433323 23334455699888764
Q ss_pred CCCCC---CCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHh-cCCCEEEEeecCc
Q 018443 158 NPYYG---KTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMA-QSPNLAGVKECVG 217 (356)
Q Consensus 158 pP~y~---~~s~~~l~~y~~~va~~-~PiilYn~P~~tG~~ls~~~l~~La-~~pnivGiK~s~~ 217 (356)
+ +.. ...++.+...++.+.+. .||+++--+. .+..+.+++ ++| +.+|=+..+
T Consensus 126 ~-~~~~~~~~~~~~~~~~~~~a~~~glpv~iH~~~~------~l~~~~~~l~~~p-~~~Vi~H~g 182 (294)
T 4i6k_A 126 L-FGLNLPALNTPDWQKFLRNVESLNWQVELHAPPK------YLVQLLPQLNEYS-FDVVIDHFG 182 (294)
T ss_dssp C-TTSCCCCSSSHHHHHHHHHHHHTTCEEEEECCHH------HHHHHHHHHTTSS-SCEEESGGG
T ss_pred c-CCCCCCCcccHHHHHHHHHHHHcCCEEEEeeCcc------hHHHHHHHHHHCC-CCEEEECCC
Confidence 3 221 23457777888877776 7999986431 123445554 677 555544433
No 416
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=69.22 E-value=28 Score=34.32 Aligned_cols=72 Identities=17% Similarity=0.260 Sum_probs=41.6
Q ss_pred HHHHHHCCCCEEEEccCccc--------ccCCCHHHHHHHHHHHHHHhCC-CcEEEEecCCCCHHHHHHHHHHHHHcCCC
Q 018443 82 VNMQIVNGAEGMIVGGTTGE--------GQLMSWDEHIMLIGHTVNCFGA-SVKVIGNTGSNSTREAIHATEQGFAVGMH 152 (356)
Q Consensus 82 v~~li~~Gv~Gl~v~GstGE--------~~~Lt~eEr~~li~~~~~~~~g-rvpVi~gvg~~st~~ai~lar~a~~~Gad 152 (356)
++.+.+.|+++|.+.+..|- .+.... ...+..+.+..+. ++|||+.=|=.+..++. .|..+|||
T Consensus 292 a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~---~~~l~~v~~~~~~~~ipvia~GGI~~~~di~----kala~GAd 364 (494)
T 1vrd_A 292 TEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQ---LTAVMECSEVARKYDVPIIADGGIRYSGDIV----KALAAGAE 364 (494)
T ss_dssp HHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCH---HHHHHHHHHHHHTTTCCEEEESCCCSHHHHH----HHHHTTCS
T ss_pred HHHHHHcCCCEEEEcCCCCccccccccCCCCccH---HHHHHHHHHHHhhcCCCEEEECCcCCHHHHH----HHHHcCCC
Confidence 35677899999998544331 111222 2333344444332 79999843333455544 34457999
Q ss_pred EEEEcCCC
Q 018443 153 AALHINPY 160 (356)
Q Consensus 153 avlv~pP~ 160 (356)
+|++..|+
T Consensus 365 ~V~iGr~~ 372 (494)
T 1vrd_A 365 SVMVGSIF 372 (494)
T ss_dssp EEEESHHH
T ss_pred EEEECHHH
Confidence 99998553
No 417
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=69.20 E-value=13 Score=33.86 Aligned_cols=34 Identities=18% Similarity=0.107 Sum_probs=28.6
Q ss_pred cEEEEecCCC-CHHHHHHHHHHHHHcCCCEEEEcC
Q 018443 125 VKVIGNTGSN-STREAIHATEQGFAVGMHAALHIN 158 (356)
Q Consensus 125 vpVi~gvg~~-st~~ai~lar~a~~~Gadavlv~p 158 (356)
.-||+|..+. +.+.++++++.++++|+|+|....
T Consensus 24 ~~vIAgpc~~~~~e~a~~~a~~l~~~Ga~~vk~~~ 58 (262)
T 1zco_A 24 FTIIAGPCSIESREQIMKVAEFLAEVGIKVLRGGA 58 (262)
T ss_dssp CEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBS
T ss_pred cEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEEe
Confidence 4478887544 799999999999999999998874
No 418
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=69.16 E-value=6.4 Score=33.80 Aligned_cols=77 Identities=12% Similarity=0.013 Sum_probs=47.1
Q ss_pred HHCCCCEE-EEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEE--ecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCC
Q 018443 86 IVNGAEGM-IVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG--NTGSNSTREAIHATEQGFAVGMHAALHINPYYG 162 (356)
Q Consensus 86 i~~Gv~Gl-~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~--gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~ 162 (356)
.+.|++-+ +..+.++.+...+..+ +.++.+.+. ++|+++ |+... .++.+.++|||++.+..+.+.
T Consensus 124 ~~~g~d~v~~~~~~~~~~~g~~~~~--~~i~~~~~~---~~pi~v~GGI~~~-------~~~~~~~aGad~vvvGsaI~~ 191 (207)
T 3ajx_A 124 RALGAKFVEMHAGLDEQAKPGFDLN--GLLAAGEKA---RVPFSVAGGVKVA-------TIPAVQKAGAEVAVAGGAIYG 191 (207)
T ss_dssp HHTTCSEEEEECCHHHHTSTTCCTH--HHHHHHHHH---TSCEEEESSCCGG-------GHHHHHHTTCSEEEESHHHHT
T ss_pred HHhCCCEEEEEecccccccCCCchH--HHHHHhhCC---CCCEEEECCcCHH-------HHHHHHHcCCCEEEEeeeccC
Confidence 34589988 7766655444444444 334444432 456654 45432 445557899999999988877
Q ss_pred CCCHHHHHHHHH
Q 018443 163 KTSLEGLISHFD 174 (356)
Q Consensus 163 ~~s~~~l~~y~~ 174 (356)
..+..+..+-|+
T Consensus 192 ~~dp~~~~~~~~ 203 (207)
T 3ajx_A 192 AADPAAAAKELR 203 (207)
T ss_dssp SSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 666655555444
No 419
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=69.09 E-value=61 Score=28.63 Aligned_cols=129 Identities=12% Similarity=0.144 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEE-EecC------CCC-------HHHHHHH
Q 018443 77 AYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVI-GNTG------SNS-------TREAIHA 142 (356)
Q Consensus 77 ~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi-~gvg------~~s-------t~~ai~l 142 (356)
.+...++.+.+.|.+||=+.+..- .++..+ ++..++. ..+.+. ++.+ +.+ .+...+.
T Consensus 39 ~~~~~l~~~~~~G~~~vEl~~~~~------~~~~~~-~~~~l~~--~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~ 109 (287)
T 3kws_A 39 SLNEKLDFMEKLGVVGFEPGGGGL------AGRVNE-IKQALNG--RNIKVSAICAGFKGFILSTDPAIRKECMDTMKEI 109 (287)
T ss_dssp SHHHHHHHHHHTTCCEEECBSTTC------GGGHHH-HHHHHTT--SSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEecCCch------HHHHHH-HHHHHHH--cCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHH
Confidence 567788888899999997766521 122222 2223322 245543 2332 112 2344567
Q ss_pred HHHHHHcCCCEEEEcCCCCC----C-CCH---HHHHHHHHHHHhc-----CCeEEEeCCCCCCC-CCCHHHHHHHhc---
Q 018443 143 TEQGFAVGMHAALHINPYYG----K-TSL---EGLISHFDSVLSM-----GPTIIYNVPSRTGQ-DIPPRVIHTMAQ--- 205 (356)
Q Consensus 143 ar~a~~~Gadavlv~pP~y~----~-~s~---~~l~~y~~~va~~-----~PiilYn~P~~tG~-~ls~~~l~~La~--- 205 (356)
++.|+++|++.+.+.+.+.. . ..+ +.+.+.++.+++. +.+.+-|.+...+. --+++.+.+|.+
T Consensus 110 i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~~~~ll~~v~ 189 (287)
T 3kws_A 110 IAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEPLNRKECFYLRQVADAASLCRDIN 189 (287)
T ss_dssp HHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECCCCTTTCSSCCCHHHHHHHHHHHC
T ss_pred HHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcccCcccCCHHHHHHHHHHcC
Confidence 78889999999988654321 1 233 3355566666542 46777776532232 235777777763
Q ss_pred CCCEEEEee
Q 018443 206 SPNLAGVKE 214 (356)
Q Consensus 206 ~pnivGiK~ 214 (356)
.||+.-.=|
T Consensus 190 ~~~vg~~~D 198 (287)
T 3kws_A 190 NPGVRCMGD 198 (287)
T ss_dssp CTTEEEEEE
T ss_pred CCCeeEEee
Confidence 577543333
No 420
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=69.04 E-value=25 Score=32.82 Aligned_cols=67 Identities=10% Similarity=0.171 Sum_probs=42.6
Q ss_pred HHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhC--CCcEEEEec---CCCCH------------HHHHHH
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFG--ASVKVIGNT---GSNST------------REAIHA 142 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~--grvpVi~gv---g~~st------------~~ai~l 142 (356)
+.++.+.+.|++.+.+.+..|+ ..++.+++... ++-|.+.+| ++.+- +.++++
T Consensus 94 ~av~~~a~lGaD~vTVHa~~G~----------~~m~aa~e~a~~~~~~~~llaVtvLTS~s~~~l~~l~~~~~~e~V~~l 163 (303)
T 3ru6_A 94 DACEEVSKLGVDMINIHASAGK----------IAIQEVMTRLSKFSKRPLVLAVSALTSFDEENFFSIYRQKIEEAVINF 163 (303)
T ss_dssp HHHHHHHTTTCSEEEEEGGGCH----------HHHHHHHHHHTTSSSCCEEEEECSCTTCCHHHHHHHHSSCHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEeccCCH----------HHHHHHHHHHHhcCCCceEEEEEEecCCCHHHHHHHHcCCHHHHHHHH
Confidence 3455566789999999998884 34444555432 223444443 33332 234678
Q ss_pred HHHHHHcCCCEEEE
Q 018443 143 TEQGFAVGMHAALH 156 (356)
Q Consensus 143 ar~a~~~Gadavlv 156 (356)
++.+++.|+|+++.
T Consensus 164 A~~a~~~G~dGvV~ 177 (303)
T 3ru6_A 164 SKISYENGLDGMVC 177 (303)
T ss_dssp HHHHHHTTCSEEEC
T ss_pred HHHHHHcCCCEEEE
Confidence 88899999999876
No 421
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=68.52 E-value=41 Score=31.58 Aligned_cols=125 Identities=8% Similarity=-0.006 Sum_probs=89.6
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHHHHHHHHHHcCC
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 151 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai~lar~a~~~Ga 151 (356)
-+.+.+.+.++.+++.|.+.+=+--.. +.++=.+.++.+.+.++.++++.+=+ ++-+.++++++++..++.|+
T Consensus 139 ~~~~~~~~~a~~~~~~G~~~~K~K~G~------~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i 212 (356)
T 3ro6_B 139 KPVEETLAEAREHLALGFRVLKVKLCG------DEEQDFERLRRLHETLAGRAVVRVDPNQSYDRDGLLRLDRLVQELGI 212 (356)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCS------CHHHHHHHHHHHHHHHTTSSEEEEECTTCCCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeCC------CHHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCC
Confidence 367888999999999999988553221 56777888889999998889998865 45689999999999999987
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc---CCCEEEEeecC
Q 018443 152 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ---SPNLAGVKECV 216 (356)
Q Consensus 152 davlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~---~pnivGiK~s~ 216 (356)
+.+= -|.. ..+ .+.++++.+. .||+.=. ...+++.+.++.+ .-.++-+|-+.
T Consensus 213 ~~iE--qP~~-~~d----~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~~~~~~~~d~v~~k~~~ 269 (356)
T 3ro6_B 213 EFIE--QPFP-AGR----TDWLRALPKAIRRRIAADE------SLLGPADAFALAAPPAACGIFNIKLMK 269 (356)
T ss_dssp CCEE--CCSC-TTC----HHHHHTSCHHHHHTEEEST------TCCSHHHHHHHHSSSCSCSEEEECHHH
T ss_pred CEEE--CCCC-CCc----HHHHHHHHhcCCCCEEeCC------cCCCHHHHHHHHhcCCcCCEEEEcccc
Confidence 7653 3432 112 3445566554 5877632 2356778888885 56788888643
No 422
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=68.47 E-value=12 Score=35.30 Aligned_cols=85 Identities=8% Similarity=0.109 Sum_probs=50.0
Q ss_pred HHHHHHHHHhCCCcEEE-EecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCC
Q 018443 112 MLIGHTVNCFGASVKVI-GNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPSR 190 (356)
Q Consensus 112 ~li~~~~~~~~grvpVi-~gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~~PiilYn~P~~ 190 (356)
++++.+.+. .++||+ ++.|+-.+.+-+... .+.|+|++++..-.+...++....+-|.+..+. ||
T Consensus 230 ell~~i~~~--~~IPVV~VAeGGI~Tpeda~~~---l~~GaDgV~VGsaI~~a~dP~~aar~l~~ai~~-----~~---- 295 (330)
T 2yzr_A 230 EVLLEVKKL--GRLPVVNFAAGGVATPADAALM---MQLGSDGVFVGSGIFKSENPLERARAIVEATYN-----YD---- 295 (330)
T ss_dssp HHHHHHHHH--TSCSSEEEECSCCCSHHHHHHH---HHTTCSCEEESHHHHTSSCHHHHHHHHHHHHHT-----TT----
T ss_pred HHHHHHHHh--CCCCeEEEEECCCCCHHHHHHH---HHcCcCEEeeHHHHhcCCCHHHHHHHHHHHHHh-----cC----
Confidence 444444442 478987 788888544433333 346999999998777666776666666555542 22
Q ss_pred CCCCCCHHHHHHHhc-C-CCEEEEeec
Q 018443 191 TGQDIPPRVIHTMAQ-S-PNLAGVKEC 215 (356)
Q Consensus 191 tG~~ls~~~l~~La~-~-pnivGiK~s 215 (356)
.|+.+.++++ + ...+|+-.+
T Consensus 296 -----~~~~~~~~s~~~~~~m~g~~~~ 317 (330)
T 2yzr_A 296 -----KPDIVAEVSKNLGEAMKGIDIT 317 (330)
T ss_dssp -----CHHHHHHHHTTCCCCCCC----
T ss_pred -----CHHHHHHHHhcccccCcCcccc
Confidence 3567777774 4 345555443
No 423
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=68.43 E-value=12 Score=41.53 Aligned_cols=99 Identities=15% Similarity=0.164 Sum_probs=78.7
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcC
Q 018443 71 GRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVG 150 (356)
Q Consensus 71 g~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~G 150 (356)
+..|.+-+.++++.+.+.|++-|.++-|+| .+++.+-.++++.+.+.+ .+|+=+++ +++.--++.-+-.|.++|
T Consensus 704 ~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G---~~~P~~~~~lv~~l~~~~--~~~i~~H~-Hnd~GlAvAn~laAv~aG 777 (1165)
T 2qf7_A 704 PKYDLKYYTNLAVELEKAGAHIIAVKDMAG---LLKPAAAKVLFKALREAT--GLPIHFHT-HDTSGIAAATVLAAVEAG 777 (1165)
T ss_dssp GGGCHHHHHHHHHHHHHTTCSEEEEEETTC---CCCHHHHHHHHHHHHHHC--SSCEEEEE-CBTTSCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCccC---CcCHHHHHHHHHHHHHhc--CCeEEEEE-CCCCCHHHHHHHHHHHhC
Confidence 348999999999999999999999999999 578999999999999887 56776665 456777888899999999
Q ss_pred CCEEEEcCCCC----CCCCHHHHHHHHHH
Q 018443 151 MHAALHINPYY----GKTSLEGLISHFDS 175 (356)
Q Consensus 151 adavlv~pP~y----~~~s~~~l~~y~~~ 175 (356)
||.|=..---+ +.++-++++..++.
T Consensus 778 a~~vd~ti~GlGe~~Gn~~le~vv~~L~~ 806 (1165)
T 2qf7_A 778 VDAVDAAMDALSGNTSQPCLGSIVEALSG 806 (1165)
T ss_dssp CSEEEEBCGGGCSBTSCCBHHHHHHHHTT
T ss_pred CCEEEecccccCCCccchhHHHHHHHHHh
Confidence 99997664333 23455666665543
No 424
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=68.32 E-value=26 Score=33.61 Aligned_cols=74 Identities=19% Similarity=0.250 Sum_probs=42.5
Q ss_pred HHHHHHHHCCCCEEEEccCccc--------ccCCCHHHHHHHHHHHHHHhC-CCcEEEEecCCCCHHHHHHHHHHHHHcC
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGE--------GQLMSWDEHIMLIGHTVNCFG-ASVKVIGNTGSNSTREAIHATEQGFAVG 150 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE--------~~~Lt~eEr~~li~~~~~~~~-grvpVi~gvg~~st~~ai~lar~a~~~G 150 (356)
+.++.+.+.|+++|.+.+..|- .+.... ...+..+.+..+ .++|||+.=|=.+.+++.+ +..+|
T Consensus 206 ~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~---~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~----ala~G 278 (404)
T 1eep_A 206 EAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQ---ITAICDVYEACNNTNICIIADGGIRFSGDVVK----AIAAG 278 (404)
T ss_dssp HHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCH---HHHHHHHHHHHTTSSCEEEEESCCCSHHHHHH----HHHHT
T ss_pred HHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcch---HHHHHHHHHHHhhcCceEEEECCCCCHHHHHH----HHHcC
Confidence 4566777899999998321111 011111 234444555443 4799997333334555544 34469
Q ss_pred CCEEEEcCCC
Q 018443 151 MHAALHINPY 160 (356)
Q Consensus 151 adavlv~pP~ 160 (356)
||+|++..++
T Consensus 279 Ad~V~iG~~~ 288 (404)
T 1eep_A 279 ADSVMIGNLF 288 (404)
T ss_dssp CSEEEECHHH
T ss_pred CCHHhhCHHH
Confidence 9999998654
No 425
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=68.26 E-value=28 Score=31.30 Aligned_cols=87 Identities=10% Similarity=0.021 Sum_probs=55.3
Q ss_pred EEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHH
Q 018443 92 GMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLIS 171 (356)
Q Consensus 92 Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~ 171 (356)
|+++...+..| +.+-.+-++..++.. ...+++..+..+.++..+..+...+.++||+++.+.. .+....
T Consensus 7 gvi~~~~~~~~----~~~~~~gi~~~a~~~--g~~~~~~~~~~~~~~~~~~i~~~~~~~vdgiIi~~~~-----~~~~~~ 75 (330)
T 3uug_A 7 GIAMPTKSSAR----WIDDGNNIVKQLQEA--GYKTDLQYADDDIPNQLSQIENMVTKGVKVLVIASID-----GTTLSD 75 (330)
T ss_dssp EEEECCSSSTH----HHHHHHHHHHHHHHT--TCEEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSS-----GGGGHH
T ss_pred EEEeCCCcchH----HHHHHHHHHHHHHHc--CCEEEEeeCCCCHHHHHHHHHHHHHcCCCEEEEEcCC-----chhHHH
Confidence 55555443332 233344444444443 3455555566788888899999988999999988643 233445
Q ss_pred HHHHHHhc-CCeEEEeCCC
Q 018443 172 HFDSVLSM-GPTIIYNVPS 189 (356)
Q Consensus 172 y~~~va~~-~PiilYn~P~ 189 (356)
.++.+.+. .|++++|.+.
T Consensus 76 ~~~~~~~~giPvV~~~~~~ 94 (330)
T 3uug_A 76 VLKQAGEQGIKVIAYDRLI 94 (330)
T ss_dssp HHHHHHHTTCEEEEESSCC
T ss_pred HHHHHHHCCCCEEEECCCC
Confidence 56666666 7999999753
No 426
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=68.22 E-value=46 Score=31.55 Aligned_cols=126 Identities=13% Similarity=-0.001 Sum_probs=88.6
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHHHHHHHHHHc-C
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAV-G 150 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai~lar~a~~~-G 150 (356)
+|.+.+.+.+....+.|.+++=+-...+ +.++=.+.++.+.+.++.++++.+-+ ++.+.++++++++..++. |
T Consensus 138 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~-----~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~~ 212 (382)
T 2gdq_A 138 QWISRSVSNVEAQLKKGFEQIKVKIGGT-----SFKEDVRHINALQHTAGSSITMILDANQSYDAAAAFKWERYFSEWTN 212 (382)
T ss_dssp THHHHHHHHHHHHHTTTCCEEEEECSSS-----CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHTTHHHHTTCSC
T ss_pred ccHHHHHHHHHHHHHcCCCEEEEcCCCC-----CHHHHHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHhhccC
Confidence 3348888888888999999986543221 35666788888888888889998865 456899999999999988 7
Q ss_pred CCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEEEeecC
Q 018443 151 MHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV 216 (356)
Q Consensus 151 adavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~--~pnivGiK~s~ 216 (356)
++. +--|.- +.+ .+.++++.+. .||+.=. .-.+++.++++.+ .-+++-+|-+-
T Consensus 213 i~~--iEqP~~--~~d---~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~ 269 (382)
T 2gdq_A 213 IGW--LEEPLP--FDQ---PQDYAMLRSRLSVPVAGGE------NMKGPAQYVPLLSQRCLDIIQPDVMH 269 (382)
T ss_dssp EEE--EECCSC--SSC---HHHHHHHHTTCSSCEEECT------TCCSHHHHHHHHHTTCCSEECCCTTT
T ss_pred CeE--EECCCC--ccc---HHHHHHHHhhCCCCEEecC------CcCCHHHHHHHHHcCCCCEEecCccc
Confidence 654 444531 111 4556777775 4666432 2356788888874 56888899754
No 427
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=68.05 E-value=31 Score=32.96 Aligned_cols=114 Identities=18% Similarity=0.123 Sum_probs=71.3
Q ss_pred ccccCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecC
Q 018443 53 DIKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTG 132 (356)
Q Consensus 53 ~~~~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg 132 (356)
+++..|=.|..+--++.+.+-|.+++.+.+.+|.++|++=+=+.-. .+|-.+.+....+.. .+|+++-+-
T Consensus 23 ~v~IGG~~Pi~VQSMtnt~T~D~~atv~Qi~~l~~aG~diVRvavp--------~~~~a~al~~I~~~~--~vPlvaDiH 92 (366)
T 3noy_A 23 NVKIGGDAPIVVQSMTSTKTHDVEATLNQIKRLYEAGCEIVRVAVP--------HKEDVEALEEIVKKS--PMPVIADIH 92 (366)
T ss_dssp TEEESTTSCCEEEEECCSCTTCHHHHHHHHHHHHHTTCCEEEEECC--------SHHHHHHHHHHHHHC--SSCEEEECC
T ss_pred CEEEcCCCcEEEEEecCCCCcCHHHHHHHHHHHHHcCCCEEEeCCC--------ChHHHHHHHHHHhcC--CCCEEEeCC
Confidence 3444453344444444556799999999999999999998865322 233356666666654 689999875
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCCC-CCCCCHHHHHHHHHHHHhc-CCeEE
Q 018443 133 SNSTREAIHATEQGFAVGMHAALHINPY-YGKTSLEGLISHFDSVLSM-GPTII 184 (356)
Q Consensus 133 ~~st~~ai~lar~a~~~Gadavlv~pP~-y~~~s~~~l~~y~~~va~~-~Piil 184 (356)
- +.+.+++ |.+.|+|.+ =++|- +. +++.+.+-.+...+. .|+-|
T Consensus 93 f-~~~lal~----a~e~G~dkl-RINPGNig--~~~~~~~vv~~ak~~~~piRI 138 (366)
T 3noy_A 93 F-APSYAFL----SMEKGVHGI-RINPGNIG--KEEIVREIVEEAKRRGVAVRI 138 (366)
T ss_dssp S-CHHHHHH----HHHTTCSEE-EECHHHHS--CHHHHHHHHHHHHHHTCEEEE
T ss_pred C-CHHHHHH----HHHhCCCeE-EECCcccC--chhHHHHHHHHHHHcCCCEEE
Confidence 4 4555544 788999994 45563 33 244333332332333 68865
No 428
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=67.88 E-value=20 Score=31.19 Aligned_cols=72 Identities=8% Similarity=0.056 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHhCCCcEEEEec--CCCCHHHHHHHHHHHHHcC-CCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEE
Q 018443 110 HIMLIGHTVNCFGASVKVIGNT--GSNSTREAIHATEQGFAVG-MHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIY 185 (356)
Q Consensus 110 r~~li~~~~~~~~grvpVi~gv--g~~st~~ai~lar~a~~~G-adavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilY 185 (356)
-.+-++..++..+ ..++... +..+.++..+..+...+.+ +|++++.+... .. ....++.+.+. .|++++
T Consensus 18 ~~~gi~~~~~~~g--~~~~~~~~~~~~~~~~~~~~i~~l~~~~~vdgii~~~~~~-~~----~~~~~~~~~~~~ipvV~~ 90 (276)
T 3ksm_A 18 VYLGAQKAADEAG--VTLLHRSTKDDGDIAGQIQILSYHLSQAPPDALILAPNSA-ED----LTPSVAQYRARNIPVLVV 90 (276)
T ss_dssp HHHHHHHHHHHHT--CEEEECCCSSTTCHHHHHHHHHHHHHHSCCSEEEECCSST-TT----THHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHcC--CEEEEECCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCH-HH----HHHHHHHHHHCCCcEEEE
Confidence 3333444444443 3455444 4567888889999999999 99999886422 11 23445566665 799999
Q ss_pred eCC
Q 018443 186 NVP 188 (356)
Q Consensus 186 n~P 188 (356)
|.+
T Consensus 91 ~~~ 93 (276)
T 3ksm_A 91 DSD 93 (276)
T ss_dssp SSC
T ss_pred ecC
Confidence 864
No 429
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=67.81 E-value=8.5 Score=35.23 Aligned_cols=122 Identities=7% Similarity=-0.074 Sum_probs=68.2
Q ss_pred HHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN 158 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~p 158 (356)
+.+++.+-+.||++.++.+.. ....|-..+++.+ +. .+++--++|+-.....++.+..++..+.|+-||=..
T Consensus 37 ~~ll~~~~~~GV~~~V~v~~~-----~~~~~n~~l~~la-~~-~p~~~g~vg~v~~~~~~~~~~L~~l~~~gv~Gir~~- 108 (303)
T 4do7_A 37 DALHPLMHAQALGASIAVQAR-----AGRDETAFLLELA-CD-EARIAAVVGWEDLRAPQLAERVAEWRGTKLRGFRHQ- 108 (303)
T ss_dssp HHHHHHHHHTTCCEEEEECCS-----SSHHHHHHHHHHH-TT-CTTEEEEEECCCTTCTTHHHHHTTCCSSCEEEEECC-
T ss_pred HHHHHHHHhcCCcEEEEEccC-----CcHHHHHHHHHHH-Hh-CCCeEEEEEEeCCCCchHHHHHHHHhhcCceEEEec-
Confidence 455566668899998877764 2345666666533 22 234433445322222224444433346788888765
Q ss_pred CCCCC-----CCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHh-cCCCEEEEee
Q 018443 159 PYYGK-----TSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMA-QSPNLAGVKE 214 (356)
Q Consensus 159 P~y~~-----~s~~~l~~y~~~va~~-~PiilYn~P~~tG~~ls~~~l~~La-~~pnivGiK~ 214 (356)
+.+.. .+++.+...++.+++. .|++++-.+. .++.+.+++ ++|++.=|=+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~glpv~ih~~~~------~l~~l~~ll~~~P~l~iVi~ 165 (303)
T 4do7_A 109 LQDEADVRAFVDDADFARGVAWLQANDYVYDVLVFER------QLPDVQAFCARHDAHWLVLD 165 (303)
T ss_dssp GGGSSCHHHHHHCHHHHHHHHHHHHTTCEEEECCCGG------GHHHHHHHHHHCCSSCEEEG
T ss_pred CcCCCCccccccCHHHHHHHHHHHHCCCeEEEecCHH------HHHHHHHHHHHCCCCCEEEe
Confidence 33322 2234567777777766 7999886442 234555665 6886544433
No 430
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=67.63 E-value=60 Score=33.61 Aligned_cols=121 Identities=12% Similarity=0.060 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHCCCCEEEEccCcc----------------cccCCCHHHHHHHHHHHH----HHhCCCcEEEEecC---
Q 018443 76 EAYDDLVNMQIVNGAEGMIVGGTTG----------------EGQLMSWDEHIMLIGHTV----NCFGASVKVIGNTG--- 132 (356)
Q Consensus 76 ~~l~~~v~~li~~Gv~Gl~v~GstG----------------E~~~Lt~eEr~~li~~~~----~~~~grvpVi~gvg--- 132 (356)
+.+.+-.++..++|.|||=+.|..| |+ -=|.+-|.+++..++ +.++.+.||.+=++
T Consensus 149 ~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~y-GGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~ 227 (729)
T 1o94_A 149 QFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKY-GGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDT 227 (729)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTT-SSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcC-CCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEcccc
Confidence 4555555666779999999888764 22 235677766555554 45556778876442
Q ss_pred -----CCC-HHHHHHHHHHHHHcCCCEEEEcC------------CCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCC
Q 018443 133 -----SNS-TREAIHATEQGFAVGMHAALHIN------------PYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTG 192 (356)
Q Consensus 133 -----~~s-t~~ai~lar~a~~~Gadavlv~p------------P~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG 192 (356)
+.+ .++++++++.+++ |+|.+-+.. |.|.... .-..+.+.|.+. .||+. .|
T Consensus 228 ~~~~~G~~~~~~~~~~~~~l~~-~~d~~~v~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~pvi~------~G 298 (729)
T 1o94_A 228 VYGPGQIEAEVDGQKFVEMADS-LVDMWDITIGDIAEWGEDAGPSRFYQQG--HTIPWVKLVKQVSKKPVLG------VG 298 (729)
T ss_dssp SSCTTSCCTTTHHHHHHHHHGG-GCSEEEEEECCSTTGGGTSCCTTTCCTT--TTHHHHHHHHTTCSSCEEC------CS
T ss_pred CcCCCCCCchHHHHHHHHHHHh-hcCEEEEeeecccccccccCCccccCcc--ccHHHHHHHHHHCCCEEEE------eC
Confidence 233 5789999999988 799874432 2221111 013344555554 47652 24
Q ss_pred CCCCHHHHHHHhcC
Q 018443 193 QDIPPRVIHTMAQS 206 (356)
Q Consensus 193 ~~ls~~~l~~La~~ 206 (356)
---+++..+++.+.
T Consensus 299 ~i~~~~~a~~~l~~ 312 (729)
T 1o94_A 299 RYTDPEKMIEIVTK 312 (729)
T ss_dssp CCCCHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHC
Confidence 33468888887643
No 431
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=67.58 E-value=25 Score=31.11 Aligned_cols=58 Identities=12% Similarity=0.071 Sum_probs=39.6
Q ss_pred EEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCC
Q 018443 126 KVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVP 188 (356)
Q Consensus 126 pVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~P 188 (356)
.++......+.+...+..+...+.++|++++.+... +.....++.+.+. .|++++|.+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~~~~-----~~~~~~~~~~~~~~iPvV~~~~~ 93 (309)
T 2fvy_A 35 QLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDP-----AAAGTVIEKARGQNVPVVFFNKE 93 (309)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSG-----GGHHHHHHHHHTTTCCEEEESSC
T ss_pred EEEEecCCCCHHHHHHHHHHHHHcCCCEEEEeCCCc-----chhHHHHHHHHHCCCcEEEecCC
Confidence 555555556777778888888889999999876422 1223344555555 799999875
No 432
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=67.47 E-value=63 Score=28.19 Aligned_cols=103 Identities=11% Similarity=-0.047 Sum_probs=65.5
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcE--EEEecCCCCHHHHHHHHHHHHHc--
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVK--VIGNTGSNSTREAIHATEQGFAV-- 149 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvp--Vi~gvg~~st~~ai~lar~a~~~-- 149 (356)
++++.+..+++|++.|..-+.+.+.. ....+..+|.+-+..+.+..+-... .+. .+..+.+++.+.++...+.
T Consensus 111 ~~~~~~~a~~~L~~~G~~~i~~i~~~--~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~ 187 (289)
T 3g85_A 111 NYKMGEKASLLFAKKRYKSAAAILTE--SLNDAMDNRNKGFIETCHKNGIKISENHII-AAENSIHGGVDAAKKLMKLKN 187 (289)
T ss_dssp HHHHHHHHHHHHHHTTCCBCEEEECC--CSSHHHHHHHHHHHHHHHHTTCBCCGGGEE-ECCSSHHHHHHHHHHHTTSSS
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCC--cccccHHHHHHHHHHHHHHcCCCCChhhee-ccCCCHHHHHHHHHHHHcCCC
Confidence 46778888999999998877655543 2234567888888887776543321 122 3455677777777777654
Q ss_pred CCCEEEEcCCCCCCCCHHHHHHHHHHHHhc---CC----eEEEe
Q 018443 150 GMHAALHINPYYGKTSLEGLISHFDSVLSM---GP----TIIYN 186 (356)
Q Consensus 150 Gadavlv~pP~y~~~s~~~l~~y~~~va~~---~P----iilYn 186 (356)
..|++++. ++.....-++++.+. .| |+-||
T Consensus 188 ~~~ai~~~-------~d~~a~g~~~al~~~g~~vP~di~vig~d 224 (289)
T 3g85_A 188 TPKALFCN-------SDSIALGVISVLNKRQISIPDDIEIVAIG 224 (289)
T ss_dssp CCSEEEES-------SHHHHHHHHHHHHHTTCCTTTTCEEEEEE
T ss_pred CCcEEEEc-------CCHHHHHHHHHHHHcCCCCCCceEEEEeC
Confidence 47888765 444444555556554 34 66676
No 433
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=67.37 E-value=27 Score=32.71 Aligned_cols=72 Identities=11% Similarity=0.027 Sum_probs=43.1
Q ss_pred HHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHH----HHHHHhC---CCcEEEEecCCCCHHHHHHHHHHHHHcC
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIG----HTVNCFG---ASVKVIGNTGSNSTREAIHATEQGFAVG 150 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~----~~~~~~~---grvpVi~gvg~~st~~ai~lar~a~~~G 150 (356)
+.++++.++++|++++.+.-+.|. .||.++..+.+. .+++.++ +.+|++--+++.. .+.....+.|
T Consensus 195 ~~~~~~~~~~aGad~iqi~D~~~~--~lsp~~f~ef~~p~~~~i~~~i~~~~~~~~~ih~c~g~~-----~~l~~l~~~g 267 (353)
T 1j93_A 195 MAKYIRYQADSGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDSVKLTHPNLPLILYASGSG-----GLLERLPLTG 267 (353)
T ss_dssp HHHHHHHHHHTTCSEEEEECGGGG--GSCHHHHHHHTHHHHHHHHHHHHHHSTTCCEEEECSSCT-----TTGGGGGGGC
T ss_pred HHHHHHHHHHhCCCEEEEeCcccc--cCCHHHHHHHhHHHHHHHHHHHHHhCCCCCEEEECCChH-----HHHHHHHhcC
Confidence 344556778899999988766654 789887766542 2233332 1467764444332 2334445678
Q ss_pred CCEEEE
Q 018443 151 MHAALH 156 (356)
Q Consensus 151 adavlv 156 (356)
+|++.+
T Consensus 268 ~d~~~~ 273 (353)
T 1j93_A 268 VDVVSL 273 (353)
T ss_dssp CSEEEC
T ss_pred CCEEEe
Confidence 887654
No 434
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=67.31 E-value=11 Score=34.39 Aligned_cols=130 Identities=15% Similarity=0.141 Sum_probs=75.8
Q ss_pred EeeecccCCCC---CCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHH
Q 018443 61 TAIKTPYLPDG---RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTR 137 (356)
Q Consensus 61 ~al~TPf~~dg---~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~ 137 (356)
-+++=|=..|. ..+++.+.+-++.+.+.|++|++++.-|-++ .+..+--++|++.+ + ..++..+=.-..+.
T Consensus 55 ~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg-~iD~~~~~~Li~~a----~-~~~vTFHRAfD~~~ 128 (256)
T 1twd_A 55 HPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDG-NVDMPRMEKIMAAA----G-PLAVTFHRAFDMCA 128 (256)
T ss_dssp EEBCCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTS-SBCHHHHHHHHHHH----T-TSEEEECGGGGGCS
T ss_pred EEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCC-CcCHHHHHHHHHHh----C-CCcEEEECchhccC
Confidence 34555633332 3567778888889999999999766555554 56776666666433 3 46887764322223
Q ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHh
Q 018443 138 EAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMA 204 (356)
Q Consensus 138 ~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~P~~tG~~ls~~~l~~La 204 (356)
+-.+..+...++|++.|+-.-- ..+-.+-....+++.+. ..+.|- .|-.++++-+.+|.
T Consensus 129 d~~~ale~L~~lG~~rILTSG~---~~~a~~g~~~L~~Lv~~a~~i~Im-----~GgGv~~~Ni~~l~ 188 (256)
T 1twd_A 129 NPLYTLNNLAELGIARVLTSGQ---KSDALQGLSKIMELIAHRDAPIIM-----AGAGVRAENLHHFL 188 (256)
T ss_dssp CHHHHHHHHHHHTCCEEEECTT---SSSTTTTHHHHHHHHTSSSCCEEE-----EESSCCTTTHHHHH
T ss_pred CHHHHHHHHHHcCCCEEECCCC---CCCHHHHHHHHHHHHHhhCCcEEE-----ecCCcCHHHHHHHH
Confidence 4444456667789999996421 22333334455555443 122221 24456666666665
No 435
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=67.30 E-value=23 Score=31.32 Aligned_cols=127 Identities=15% Similarity=0.093 Sum_probs=71.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEE-e----------cCCCCHHHHHHH
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG-N----------TGSNSTREAIHA 142 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~-g----------vg~~st~~ai~l 142 (356)
|.+...+.++.+++.+++|+++.+... +. ..++ .....++||+. + |+....+..-..
T Consensus 49 ~~~~~~~~~~~l~~~~vdgiIi~~~~~-----~~----~~~~---~~~~~~iPvV~~~~~~~~~~~~~V~~D~~~~g~~a 116 (291)
T 3egc_A 49 DIVREREAVGQFFERRVDGLILAPSEG-----EH----DYLR---TELPKTFPIVAVNRELRIPGCGAVLSENVRGARTA 116 (291)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCCSS-----CC----HHHH---HSSCTTSCEEEESSCCCCTTCEEEEECHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCC-----Ch----HHHH---HhhccCCCEEEEecccCCCCCCEEEECcHHHHHHH
Confidence 667788999999999999999887654 11 1222 22244677643 2 223345566677
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHH-HHhc-CC---e-EEEeCCCCCCCCCCHHHHHHHh-cCCCEEEEeec
Q 018443 143 TEQGFAVGMHAALHINPYYGKTSLEGLISHFDS-VLSM-GP---T-IIYNVPSRTGQDIPPRVIHTMA-QSPNLAGVKEC 215 (356)
Q Consensus 143 ar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~-va~~-~P---i-ilYn~P~~tG~~ls~~~l~~La-~~pnivGiK~s 215 (356)
+++..+.|..-+.++.......+..+-.+-|++ +.+. .+ . +.+.. ....-..+.+.++. +.|.+.+|=-.
T Consensus 117 ~~~L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~ai~~~ 193 (291)
T 3egc_A 117 VEYLIARGHTRIGAIVGSAGLMTSRERLKGFRAAMSAAGLPVRQEWIAAGG---VRADNGRDGAIKVLTGADRPTALLTS 193 (291)
T ss_dssp HHHHHHTTCCSEEEECSCTTSHHHHHHHHHHHHHHHHTTCCCCGGGEEC---------CCHHHHHHHHTC-CCCSEEEES
T ss_pred HHHHHHcCCCEEEEEeCCCCCcCHHHHHHHHHHHHHHcCCCCCHHHeEeCC---CChhHHHHHHHHHHhCCCCCcEEEEC
Confidence 788888998777666543322333344444444 4443 32 2 33321 11223356677776 56777766543
No 436
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=67.28 E-value=29 Score=33.69 Aligned_cols=125 Identities=10% Similarity=0.043 Sum_probs=88.5
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHHHHHHHHHHcCC
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 151 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai~lar~a~~~Ga 151 (356)
.+.+.+.+.+....+.|.+++=+-... +.++=.+.++.+.+.++.++++.+-+ ++.+.++++++++..++.|+
T Consensus 197 ~~~e~~~~~a~~~~~~Gf~~vKik~g~------~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i 270 (441)
T 2hxt_A 197 YSDEKLVRLAKEAVADGFRTIKLKVGA------NVQDDIRRCRLARAAIGPDIAMAVDANQRWDVGPAIDWMRQLAEFDI 270 (441)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCS------CHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHTTGGGCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCC------CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCC
Confidence 578889999999999999998653321 35666778888888888889998865 55689999999999999998
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc---CCeEEEeCCCCCCCCCCHHHHHHHh--cCCCEEEEeecC
Q 018443 152 HAALHINPYYGKTSLEGLISHFDSVLSM---GPTIIYNVPSRTGQDIPPRVIHTMA--QSPNLAGVKECV 216 (356)
Q Consensus 152 davlv~pP~y~~~s~~~l~~y~~~va~~---~PiilYn~P~~tG~~ls~~~l~~La--~~pnivGiK~s~ 216 (356)
+.+ --|.. ..+ .+.++.|.+. .||+.=. ...+++.+.++. ..-+++-+|-+-
T Consensus 271 ~~i--EqP~~-~~d----~~~~~~l~~~~~~iPIa~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~ 327 (441)
T 2hxt_A 271 AWI--EEPTS-PDD----VLGHAAIRQGITPVPVSTGE------HTQNRVVFKQLLQAGAVDLIQIDAAR 327 (441)
T ss_dssp SCE--ECCSC-TTC----HHHHHHHHHHHTTSCEEECT------TCCSHHHHHHHHHHTCCSEECCCTTT
T ss_pred Cee--eCCCC-HHH----HHHHHHHHhhCCCCCEEEeC------CcCCHHHHHHHHHcCCCCEEEeCcce
Confidence 854 34422 112 3344555543 4665432 245678888886 357888899754
No 437
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=67.27 E-value=54 Score=31.07 Aligned_cols=132 Identities=7% Similarity=-0.028 Sum_probs=89.0
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCcccc------cC------CCHHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHH
Q 018443 72 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEG------QL------MSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTRE 138 (356)
Q Consensus 72 ~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~------~~------Lt~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ 138 (356)
..+.+.+.+.+....+.|.+++=+-...|+. +. -..++=.+.++.+.+.++.++++.+-+ ++.+.++
T Consensus 135 ~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~~~~~~~ 214 (392)
T 2poz_A 135 ADTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLSGGLTTDE 214 (392)
T ss_dssp CCSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHH
Confidence 3578889899999999999998664432221 00 123444577888888888889998865 4568999
Q ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEEEee
Q 018443 139 AIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKE 214 (356)
Q Consensus 139 ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~--~pnivGiK~ 214 (356)
++++++..++.|++. +--|.- +. -.+.+++|.+. .||+.=. .-.+++.++++.+ .-+++-+|-
T Consensus 215 a~~~~~~l~~~~i~~--iE~P~~--~~---~~~~~~~l~~~~~ipIa~dE------~~~~~~~~~~~i~~~~~d~v~ik~ 281 (392)
T 2poz_A 215 TIRFCRKIGELDICF--VEEPCD--PF---DNGALKVISEQIPLPIAVGE------RVYTRFGFRKIFELQACGIIQPDI 281 (392)
T ss_dssp HHHHHHHHGGGCEEE--EECCSC--TT---CHHHHHHHHHHCSSCEEECT------TCCHHHHHHHHHTTTCCSEECCCT
T ss_pred HHHHHHHHHhcCCCE--EECCCC--cc---cHHHHHHHHhhCCCCEEecC------CcCCHHHHHHHHHcCCCCEEecCc
Confidence 999999999988764 444531 11 14556677665 5666432 2345788888874 468888986
Q ss_pred cC
Q 018443 215 CV 216 (356)
Q Consensus 215 s~ 216 (356)
+-
T Consensus 282 ~~ 283 (392)
T 2poz_A 282 GT 283 (392)
T ss_dssp TT
T ss_pred cc
Confidence 54
No 438
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=67.26 E-value=70 Score=28.63 Aligned_cols=125 Identities=8% Similarity=0.004 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHCCCCEEEEccCccccc---CCCHHHHHHHHHHHHHHhCCCc-EEEEec------CCCC--------HHH
Q 018443 77 AYDDLVNMQIVNGAEGMIVGGTTGEGQ---LMSWDEHIMLIGHTVNCFGASV-KVIGNT------GSNS--------TRE 138 (356)
Q Consensus 77 ~l~~~v~~li~~Gv~Gl~v~GstGE~~---~Lt~eEr~~li~~~~~~~~grv-pVi~gv------g~~s--------t~~ 138 (356)
.+...++...+.|.+++=+....-..+ .++.++..++-+.+.+ . .+ .+.++. ++.+ .+.
T Consensus 19 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~-~--gl~~~~~h~~~~~nl~s~d~~~~r~~~~~~ 95 (303)
T 3aal_A 19 MLLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQA-H--GIEEIVVHAPYIINIGNTTNLDTFSLGVDF 95 (303)
T ss_dssp THHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHH-T--TCCEEEEECCTTCCTTCSSCHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHH-c--CCceEEEeccccccCCCCCcHHHHHHHHHH
Confidence 567788888899999987643222222 2445555555444333 2 33 344432 2222 233
Q ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCH-H---HHHHHHHHHHhc---CCeEEEeCCCCCCCC-CCHHHHHHHh
Q 018443 139 AIHATEQGFAVGMHAALHINPYYGKTSL-E---GLISHFDSVLSM---GPTIIYNVPSRTGQD-IPPRVIHTMA 204 (356)
Q Consensus 139 ai~lar~a~~~Gadavlv~pP~y~~~s~-~---~l~~y~~~va~~---~PiilYn~P~~tG~~-ls~~~l~~La 204 (356)
..+.++.|+++|+..+.+.|.+....+. + .+.+.++.+++. +.+.+=|.|.....- -+++.+.+|.
T Consensus 96 ~~~~i~~A~~lGa~~vv~h~g~~~~~~~~~~~~~~~~~l~~l~~~a~gv~l~lEn~~~~~~~~~~t~~~~~~li 169 (303)
T 3aal_A 96 LRAEIERTEAIGAKQLVLHPGAHVGAGVEAGLRQIIRGLNEVLTREQNVQIALETMAGKGSECGRTFEELAYII 169 (303)
T ss_dssp HHHHHHHHHHHTCSEEEECCEECTTSCHHHHHHHHHHHHHHHCCSSCSCEEEEECCCCCTTEECSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECCCcCCCCCHHHHHHHHHHHHHHHHHhCCCCEEEEecCCCCCCccCCCHHHHHHHH
Confidence 4455678889999999877654433233 2 244445555443 356666765332222 2788877776
No 439
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=67.21 E-value=11 Score=30.54 Aligned_cols=88 Identities=10% Similarity=-0.020 Sum_probs=48.5
Q ss_pred HHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEe-cCCCCHHHHHHHHHHHHHcCCCEEEEc
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGN-TGSNSTREAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~g-vg~~st~~ai~lar~a~~~Gadavlv~ 157 (356)
+.+++...+.+++-+.+..+.+. +.++-.++++...+.-..+++|++| ..-...++--+..+.++++|+|++.-.
T Consensus 44 e~~v~~a~~~~~d~v~lS~~~~~----~~~~~~~~i~~l~~~g~~~i~v~vGG~~~~~~~~~~~~~~~~~~~G~d~~~~~ 119 (137)
T 1ccw_A 44 ELFIKAAIETKADAILVSSLYGQ----GEIDCKGLRQKCDEAGLEGILLYVGGNIVVGKQHWPDVEKRFKDMGYDRVYAP 119 (137)
T ss_dssp HHHHHHHHHHTCSEEEEEECSST----HHHHHTTHHHHHHHTTCTTCEEEEEESCSSSSCCHHHHHHHHHHTTCSEECCT
T ss_pred HHHHHHHHhcCCCEEEEEecCcC----cHHHHHHHHHHHHhcCCCCCEEEEECCCcCchHhhhhhHHHHHHCCCCEEECC
Confidence 45666666778888877776653 3344555666655542225777665 221112222223456778888886521
Q ss_pred CCCCCCCCHHHHHHHHHH
Q 018443 158 NPYYGKTSLEGLISHFDS 175 (356)
Q Consensus 158 pP~y~~~s~~~l~~y~~~ 175 (356)
..+..++.+++..
T Consensus 120 -----g~~~~~~~~~l~~ 132 (137)
T 1ccw_A 120 -----GTPPEVGIADLKK 132 (137)
T ss_dssp -----TCCHHHHHHHHHH
T ss_pred -----CCCHHHHHHHHHH
Confidence 2245566665544
No 440
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=67.19 E-value=30 Score=31.44 Aligned_cols=68 Identities=13% Similarity=0.059 Sum_probs=41.4
Q ss_pred HHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHh-----CC-CcEEEEec---CCCC--------------
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCF-----GA-SVKVIGNT---GSNS-------------- 135 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~-----~g-rvpVi~gv---g~~s-------------- 135 (356)
...++.+.+.|++.+.|.+..|. +.++.+++.+ .+ .-|.+.+| ++.+
T Consensus 73 ~~a~~~~~~~gad~vTVh~~~G~----------~~~~aa~~~~~~~~~~g~~~~~li~Vt~lTS~~~~~l~~~~g~~~~~ 142 (259)
T 3tfx_A 73 YNGAKALAKLGITFTTVHALGGS----------QMIKSAKDGLIAGTPAGHSVPKLLAVTELTSISDDVLRNEQNCRLPM 142 (259)
T ss_dssp HHHHHHHHTTTCSEEEEEGGGCH----------HHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSCBSSCH
T ss_pred HHHHHHHHhcCCCEEEEcCCCCH----------HHHHHHHHHHHHhcccCCCCceEEEEEEeCCCCHHHHHHHhCCCCCH
Confidence 34455666789999999998884 2333343332 12 12333332 3332
Q ss_pred HHHHHHHHHHHHHcCCCEEEE
Q 018443 136 TREAIHATEQGFAVGMHAALH 156 (356)
Q Consensus 136 t~~ai~lar~a~~~Gadavlv 156 (356)
.+.++++++.++++|+|++++
T Consensus 143 ~e~v~~~A~~a~~~G~dGvV~ 163 (259)
T 3tfx_A 143 AEQVLSLAKMAKHSGADGVIC 163 (259)
T ss_dssp HHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHHHhCCCEEEE
Confidence 234567889999999999886
No 441
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=67.08 E-value=21 Score=32.43 Aligned_cols=87 Identities=13% Similarity=0.072 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEE-EEecCCCC--HHHHH--HHHHHHHHcCC
Q 018443 77 AYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKV-IGNTGSNS--TREAI--HATEQGFAVGM 151 (356)
Q Consensus 77 ~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpV-i~gvg~~s--t~~ai--~lar~a~~~Ga 151 (356)
...++.+...+.|++|+++. .+| . +.+.+..+....+ .-||+... ..+.- .-.+.+.++|+
T Consensus 145 ~v~~~A~~a~~~G~dGvV~s----------~~e-~---~~ir~~~~~~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGa 210 (259)
T 3tfx_A 145 QVLSLAKMAKHSGADGVICS----------PLE-V---KKLHENIGDDFLYVTPGIRPAGNAKDDQSRVATPKMAKEWGS 210 (259)
T ss_dssp HHHHHHHHHHHTTCCEEECC----------GGG-H---HHHHHHHCSSSEEEECCCCCC-----------CHHHHHHTTC
T ss_pred HHHHHHHHHHHhCCCEEEEC----------HHH-H---HHHHhhcCCccEEEcCCcCCCCCCcCCccccCCHHHHHHcCC
Confidence 34455555567899999752 223 2 2233445555333 44886532 22221 23566778999
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHH
Q 018443 152 HAALHINPYYGKTSLEGLISHFDSVL 177 (356)
Q Consensus 152 davlv~pP~y~~~s~~~l~~y~~~va 177 (356)
|.+++--|.|...++.+..+-+++-.
T Consensus 211 d~iVvGr~I~~a~dp~~a~~~i~~~~ 236 (259)
T 3tfx_A 211 SAIVVGRPITLASDPKAAYEAIKKEF 236 (259)
T ss_dssp SEEEECHHHHTSSSHHHHHHHHHHHH
T ss_pred CEEEEChHHhCCCCHHHHHHHHHHHH
Confidence 99999999888777765554444433
No 442
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=67.02 E-value=19 Score=31.22 Aligned_cols=57 Identities=9% Similarity=-0.004 Sum_probs=32.5
Q ss_pred HHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC
Q 018443 83 NMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN 158 (356)
Q Consensus 83 ~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~p 158 (356)
+...+.|++++.+.+.. ++.++ +.+..+ .+ ++|++..+.+ .++.+.+.|+|.+++.+
T Consensus 82 ~~a~~~gad~v~l~~~~-----~~~~~-------~~~~~~-~~--~ig~sv~t~~----~~~~a~~~gaD~i~~~~ 138 (221)
T 1yad_A 82 DIALFSTIHRVQLPSGS-----FSPKQ-------IRARFP-HL--HIGRSVHSLE----EAVQAEKEDADYVLFGH 138 (221)
T ss_dssp HHHHTTTCCEEEECTTS-----CCHHH-------HHHHCT-TC--EEEEEECSHH----HHHHHHHTTCSEEEEEC
T ss_pred HHHHHcCCCEEEeCCCc-----cCHHH-------HHHHCC-CC--EEEEEcCCHH----HHHHHHhCCCCEEEECC
Confidence 55667888888764321 23222 222222 33 3444444444 35677889999998864
No 443
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=66.83 E-value=21 Score=31.96 Aligned_cols=68 Identities=10% Similarity=0.041 Sum_probs=40.1
Q ss_pred HHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhC----CCcEEEEec---CCCCH-------------HH
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFG----ASVKVIGNT---GSNST-------------RE 138 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~----grvpVi~gv---g~~st-------------~~ 138 (356)
.+.++.+.+.|++.+.+.+..|. ..++.+++... ..-|.+.+| .+.+- +.
T Consensus 76 ~~~~~~~~~~gad~vTvh~~~G~----------~~~~~a~~~~~~~~~~~~~~l~~Vt~LTS~~~~~l~~~g~~~~~~~~ 145 (239)
T 3tr2_A 76 AGACRAVAELGVWMMNIHISGGR----------TMMETVVNALQSITLKEKPLLIGVTILTSLDGSDLKTLGIQEKVPDI 145 (239)
T ss_dssp HHHHHHHHHTTCSEEEEEGGGCH----------HHHHHHHHHHHTCCCSSCCEEEEECSCTTCCHHHHHHTTCCSCHHHH
T ss_pred HHHHHHHHhCCCCEEEEeccCCH----------HHHHHHHHHHHhcCcCCCceEEEEEEEeeCCHHHHHhcCCCCCHHHH
Confidence 34566777899999999998884 34455544431 112434342 33432 34
Q ss_pred HHHHHHHHHHcCCCEEEE
Q 018443 139 AIHATEQGFAVGMHAALH 156 (356)
Q Consensus 139 ai~lar~a~~~Gadavlv 156 (356)
++++++.|++.|.|++++
T Consensus 146 v~~~A~~a~~~g~~GvV~ 163 (239)
T 3tr2_A 146 VCRMATLAKSAGLDGVVC 163 (239)
T ss_dssp HHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 455666666666666654
No 444
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=66.68 E-value=91 Score=29.70 Aligned_cols=123 Identities=8% Similarity=-0.068 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHCCCCEEEE--ccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCC-CHHHHHHHHHHHHHcCCC
Q 018443 77 AYDDLVNMQIVNGAEGMIV--GGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSN-STREAIHATEQGFAVGMH 152 (356)
Q Consensus 77 ~l~~~v~~li~~Gv~Gl~v--~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv-g~~-st~~ai~lar~a~~~Gad 152 (356)
.+.+.++.+++.|...+=+ .|.. ..+.++=.+.++.+.+.++.++++.+-. ++. +.++++++++..++.|++
T Consensus 160 ~~~~~a~~~~~~G~~~~K~~k~g~~----~~~~~~d~e~v~avR~a~G~d~~l~vDaN~~~~~~~~A~~~~~~L~~~~i~ 235 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKVCVPIKA----DWSTKEVAYYLRELRGILGHDTDMMVDYLYRFTDWYEVARLLNSIEDLELY 235 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTC----CCCHHHHHHHHHHHHHHHCSSSEEEEECTTCCCCHHHHHHHHHHTGGGCCS
T ss_pred HHHHHHHHHHHcCCCEEEeCccCCC----ccCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCCHHHHHHHHHHhhhcCCe
Confidence 6667888889999999865 3321 1356777888999999998899998876 345 789999999999999987
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEEEeecC
Q 018443 153 AALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV 216 (356)
Q Consensus 153 avlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~--~pnivGiK~s~ 216 (356)
.+= -|.. ..+ .+.+++|.+. .||+.=. ...+++.+.++.+ .-.++.+|-+.
T Consensus 236 ~iE--eP~~-~~d----~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~l~~~~~d~v~~k~~~ 290 (394)
T 3mkc_A 236 FAE--ATLQ-HDD----LSGHAKLVENTRSRICGAE------MSTTRFEAEEWITKGKVHLLQSDYNR 290 (394)
T ss_dssp EEE--SCSC-TTC----HHHHHHHHHHCSSCBEECT------TCCHHHHHHHHHHTTCCSEECCCTTT
T ss_pred EEE--CCCC-chh----HHHHHHHHhhCCCCEEeCC------CCCCHHHHHHHHHcCCCCeEecCccc
Confidence 653 3432 112 3456777765 4665432 2345778888874 46788898765
No 445
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=66.66 E-value=31 Score=30.32 Aligned_cols=52 Identities=6% Similarity=-0.012 Sum_probs=38.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCC
Q 018443 132 GSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVP 188 (356)
Q Consensus 132 g~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~P 188 (356)
...+.++..+..+.+.+.++||+++.+.. .+....+++.+.+. .|++++|.+
T Consensus 51 ~~~~~~~~~~~i~~l~~~~vdgiii~~~~-----~~~~~~~~~~~~~~~iPvV~~~~~ 103 (304)
T 3gbv_A 51 DPYDYNSFVATSQAVIEEQPDGVMFAPTV-----PQYTKGFTDALNELGIPYIYIDSQ 103 (304)
T ss_dssp CSSCHHHHHHHHHHHHTTCCSEEEECCSS-----GGGTHHHHHHHHHHTCCEEEESSC
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEECCCC-----hHHHHHHHHHHHHCCCeEEEEeCC
Confidence 45578888888899999999999998652 22334556666665 799999864
No 446
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=66.66 E-value=15 Score=36.54 Aligned_cols=72 Identities=13% Similarity=0.064 Sum_probs=40.4
Q ss_pred HHHHHHHCCCCEEEEccCcccccCCCH-------HHHHHHHHHHHHHh-------CCCcEEEE--ecCCCCHHHHHHHHH
Q 018443 81 LVNMQIVNGAEGMIVGGTTGEGQLMSW-------DEHIMLIGHTVNCF-------GASVKVIG--NTGSNSTREAIHATE 144 (356)
Q Consensus 81 ~v~~li~~Gv~Gl~v~GstGE~~~Lt~-------eEr~~li~~~~~~~-------~grvpVi~--gvg~~st~~ai~lar 144 (356)
.++.+++.|++++.+ |..|=.+.-+. . ....+..+++.+ +.++|||+ |+.. ..+ +.
T Consensus 297 ~a~~l~~aGad~I~V-g~~~g~~~~~r~~~~~g~p-~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~--~~d----i~ 368 (503)
T 1me8_A 297 GFRYLADAGADFIKI-GIGGGSICITREQKGIGRG-QATAVIDVVAERNKYFEETGIYIPVCSDGGIVY--DYH----MT 368 (503)
T ss_dssp HHHHHHHHTCSEEEE-CSSCSTTCCSTTTTCCCCC-HHHHHHHHHHHHHHHHHHHSEECCEEEESCCCS--HHH----HH
T ss_pred HHHHHHHhCCCeEEe-cccCCcCcccccccCCCCc-hHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCC--HHH----HH
Confidence 345677889999988 54331111110 1 122222232222 22699999 6653 333 33
Q ss_pred HHHHcCCCEEEEcCCC
Q 018443 145 QGFAVGMHAALHINPY 160 (356)
Q Consensus 145 ~a~~~Gadavlv~pP~ 160 (356)
.|.++|||+|++-.|+
T Consensus 369 kAlalGA~~V~iG~~~ 384 (503)
T 1me8_A 369 LALAMGADFIMLGRYF 384 (503)
T ss_dssp HHHHTTCSEEEESHHH
T ss_pred HHHHcCCCEEEECchh
Confidence 5567899999998754
No 447
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=66.61 E-value=21 Score=31.61 Aligned_cols=72 Identities=17% Similarity=0.271 Sum_probs=38.2
Q ss_pred HHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCH-----HHHHHHHHHHHHcCCC
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNST-----REAIHATEQGFAVGMH 152 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st-----~~ai~lar~a~~~Gad 152 (356)
.++.++.+.+.|++.+.+.+..|+ +--...++.+.+ .+.++.|+...++.+. +.+.++++.+++.|.+
T Consensus 80 v~~~~~~~~~~gad~vtvh~~~G~------~~l~~~~~~~~~-~g~~v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~ 152 (228)
T 3m47_A 80 NEKICRATFKAGADAIIVHGFPGA------DSVRACLNVAEE-MGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVK 152 (228)
T ss_dssp HHHHHHHHHHTTCSEEEEESTTCH------HHHHHHHHHHHH-HTCEEEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCCCCEEEEeccCCH------HHHHHHHHHHHh-cCCCeEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCc
Confidence 466777777788888888777764 111122222221 2223333333333221 2235567777777877
Q ss_pred EEEE
Q 018443 153 AALH 156 (356)
Q Consensus 153 avlv 156 (356)
++++
T Consensus 153 GvV~ 156 (228)
T 3m47_A 153 NYVG 156 (228)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 7654
No 448
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=66.55 E-value=16 Score=34.86 Aligned_cols=42 Identities=10% Similarity=-0.037 Sum_probs=18.7
Q ss_pred cCCCHHHHHHHHHHHHHHhCC-CcEEEEec-CC-CCHHHHHHHHH
Q 018443 103 QLMSWDEHIMLIGHTVNCFGA-SVKVIGNT-GS-NSTREAIHATE 144 (356)
Q Consensus 103 ~~Lt~eEr~~li~~~~~~~~g-rvpVi~gv-g~-~st~~ai~lar 144 (356)
+.+|.+|++.+...+.-+..- ++||++++ +. ....++++..+
T Consensus 171 ~~~t~~q~~~f~aq~~~A~~~~glPV~iH~~r~~~a~~e~l~iL~ 215 (365)
T 3rhg_A 171 PFFTDGEKNSLRAAALAQNNNPYASMNIHMPGWQRRGDEVLDILL 215 (365)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCTTCEEEEECCTTSCCHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHhcCCcEEEECCCCCcCHHHHHHHHH
Confidence 345544444444333323333 55666665 31 34455544443
No 449
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=66.54 E-value=55 Score=29.47 Aligned_cols=72 Identities=7% Similarity=0.005 Sum_probs=46.3
Q ss_pred HHHHHHHHHhC-C-CcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCC
Q 018443 112 MLIGHTVNCFG-A-SVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVP 188 (356)
Q Consensus 112 ~li~~~~~~~~-g-rvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~P 188 (356)
++++.+.+.+. . ...+++.....+.+...+..+...+.++||+++.+. +.+.+...++.+.+. .|+++++.+
T Consensus 22 ~~~~gi~~~a~~~~g~~l~i~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~-----~~~~~~~~~~~~~~~~iPvV~~~~~ 96 (325)
T 2x7x_A 22 KMNDEILREAMFYNGVSVEIRSAGDDNSKQAEDVHYFMDEGVDLLIISAN-----EAAPMTPIVEEAYQKGIPVILVDRK 96 (325)
T ss_dssp HHHHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCS-----SHHHHHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCC-----CHHHHHHHHHHHHHCCCeEEEeCCC
Confidence 34444444332 2 456665555567777778888888899999998753 233344555666555 799999864
No 450
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=66.47 E-value=18 Score=33.12 Aligned_cols=72 Identities=11% Similarity=0.077 Sum_probs=39.4
Q ss_pred EEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHHHhc-
Q 018443 127 VIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHTMAQ- 205 (356)
Q Consensus 127 Vi~gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~~PiilYn~P~~tG~~ls~~~l~~La~- 205 (356)
|+.++...+.++.-++.+.+.+.|.+.++-+ .+.+++..-. .....++-.|+-.......+.+.+.+|.+
T Consensus 139 VlLi~a~l~~~~l~~l~~~a~~lGl~~lvev------~t~ee~~~A~---~~Gad~IGv~~r~l~~~~~dl~~~~~l~~~ 209 (272)
T 3qja_A 139 LLLIVAALEQSVLVSMLDRTESLGMTALVEV------HTEQEADRAL---KAGAKVIGVNARDLMTLDVDRDCFARIAPG 209 (272)
T ss_dssp EEEEGGGSCHHHHHHHHHHHHHTTCEEEEEE------SSHHHHHHHH---HHTCSEEEEESBCTTTCCBCTTHHHHHGGG
T ss_pred EEEecccCCHHHHHHHHHHHHHCCCcEEEEc------CCHHHHHHHH---HCCCCEEEECCCcccccccCHHHHHHHHHh
Confidence 5555555566666677777777777755433 3555553322 11246666664211223345567778874
Q ss_pred CC
Q 018443 206 SP 207 (356)
Q Consensus 206 ~p 207 (356)
+|
T Consensus 210 v~ 211 (272)
T 3qja_A 210 LP 211 (272)
T ss_dssp SC
T ss_pred Cc
Confidence 44
No 451
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=66.33 E-value=59 Score=33.93 Aligned_cols=96 Identities=11% Similarity=-0.022 Sum_probs=61.9
Q ss_pred HHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecC----C-----CCHHHHHHHHHHHHH
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTG----S-----NSTREAIHATEQGFA 148 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg----~-----~st~~ai~lar~a~~ 148 (356)
.+..++...++|++.+-+..++.+ .+.-...++.+.+ .+..+...+..+ + .+.+..+++++.+.+
T Consensus 199 ~~~~i~~a~~~Gvd~irIf~s~n~-----l~~l~~~i~~ak~-~G~~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~ 272 (718)
T 3bg3_A 199 VFKFCEVAKENGMDVFRVFDSLNY-----LPNMLLGMEAAGS-AGGVVEAAISYTGDVADPSRTKYSLQYYMGLAEELVR 272 (718)
T ss_dssp HHHHHHHHHHHTCCEEEEECSSCC-----HHHHHHHHHHHHT-TTSEEEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhcCcCEEEEEecHHH-----HHHHHHHHHHHHH-cCCeEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHH
Confidence 577888888999999888776543 1222222222222 222222222222 1 267889999999999
Q ss_pred cCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcC
Q 018443 149 VGMHAALHINPYYGKTSLEGLISHFDSVLSMG 180 (356)
Q Consensus 149 ~Gadavlv~pP~y~~~s~~~l~~y~~~va~~~ 180 (356)
+|||.+.+.- ..+..++.++.+.++++.+..
T Consensus 273 ~Ga~~I~l~D-T~G~~~P~~v~~lV~~lk~~~ 303 (718)
T 3bg3_A 273 AGTHILCIKD-MAGLLKPTACTMLVSSLRDRF 303 (718)
T ss_dssp HTCSEEEEEC-TTSCCCHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEcC-cCCCcCHHHHHHHHHHHHHhC
Confidence 9999776643 556677888888888888764
No 452
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=66.30 E-value=16 Score=33.55 Aligned_cols=84 Identities=21% Similarity=0.190 Sum_probs=51.1
Q ss_pred CcEEEEecCCC-CHHHHHHHHHHHHHcCCCEEEEc------CCC-CCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCC
Q 018443 124 SVKVIGNTGSN-STREAIHATEQGFAVGMHAALHI------NPY-YGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQ 193 (356)
Q Consensus 124 rvpVi~gvg~~-st~~ai~lar~a~~~Gadavlv~------pP~-y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~ 193 (356)
+.-||+|.++. +.+.++++++.++++|+|++-.. .|+ |..+..++ ...++++++. +|++-=
T Consensus 38 ~~~vIAgpc~~~~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~g-l~~l~~~~~~~Gl~~~te-------- 108 (276)
T 1vs1_A 38 SKAVIAGPCSVESWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEG-LKLLRRAGDEAGLPVVTE-------- 108 (276)
T ss_dssp BCEEEEECSBCCCHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHH-HHHHHHHHHHHTCCEEEE--------
T ss_pred CeEEEEecCCCCCHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHH-HHHHHHHHHHcCCcEEEe--------
Confidence 45689998766 88999999999999999986543 132 22334444 4555666655 565421
Q ss_pred CCCHHHHHHHhcCCCEEEEeecCch
Q 018443 194 DIPPRVIHTMAQSPNLAGVKECVGN 218 (356)
Q Consensus 194 ~ls~~~l~~La~~pnivGiK~s~~d 218 (356)
.++++.+..++++ +-.+|..+.+
T Consensus 109 ~~d~~~~~~l~~~--vd~~kIgs~~ 131 (276)
T 1vs1_A 109 VLDPRHVETVSRY--ADMLQIGARN 131 (276)
T ss_dssp CCCGGGHHHHHHH--CSEEEECGGG
T ss_pred cCCHHHHHHHHHh--CCeEEECccc
Confidence 1333333334433 3456777766
No 453
>1iq8_A Archaeosine tRNA-guanine transglycosylase; (alpha/beta)8 barrel, riken structural genomics/proteomics initiative, RSGI; 2.20A {Pyrococcus horikoshii} SCOP: b.122.1.1 c.1.20.1 d.17.6.1 PDB: 1it7_A* 1it8_A* 1j2b_A
Probab=66.10 E-value=14 Score=37.78 Aligned_cols=84 Identities=10% Similarity=-0.025 Sum_probs=65.2
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEE-EEecCCCCHHHHHHHHHHHHH
Q 018443 70 DGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKV-IGNTGSNSTREAIHATEQGFA 148 (356)
Q Consensus 70 dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpV-i~gvg~~st~~ai~lar~a~~ 148 (356)
.|..+.+--++.++.+.+.+.+|+.+.|..++......++..++++.+.+......|. +.|+|. ..+.+ .+..
T Consensus 169 QGg~~~dLR~~sa~~l~~~~~~G~aIGg~~~~~e~~~~~~~~~~l~~~~~~LP~~kPr~lmGvg~--P~~i~----~~v~ 242 (582)
T 1iq8_A 169 QGSTYTDLRRYAARRLSSMNFEIHPIGGVVPLLESYRFRDVVDIVISSKMALRPDRPVHLFGAGH--PIVFA----LAVA 242 (582)
T ss_dssp CCTTCHHHHHHHHHHHHHSCCSBEEECSCHHHHHTTCHHHHHHHHHHHHHHSCTTSCEEETTCCC--GGGHH----HHHH
T ss_pred eCCCCHHHHHHHHHHHHhCCCCeEEecCccchhhhccHHHHHHHHHHHHhhCCCCCcEEecCCCC--HHHHH----HHHH
Confidence 5778888777888999999999999999876666677888899999999998877786 558875 33333 3456
Q ss_pred cCCCEEEEcCC
Q 018443 149 VGMHAALHINP 159 (356)
Q Consensus 149 ~Gadavlv~pP 159 (356)
+|+|-.=...|
T Consensus 243 ~GvD~FDcv~p 253 (582)
T 1iq8_A 243 MGVDLFDSASY 253 (582)
T ss_dssp TTCCEEEESHH
T ss_pred cCCcEEecchh
Confidence 89987766544
No 454
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=66.08 E-value=13 Score=34.86 Aligned_cols=118 Identities=14% Similarity=0.153 Sum_probs=66.1
Q ss_pred ccCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccC-cccccC-----CC-HHHHHHHHHHHHHHhC--CCc
Q 018443 55 KALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGT-TGEGQL-----MS-WDEHIMLIGHTVNCFG--ASV 125 (356)
Q Consensus 55 ~~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~Gs-tGE~~~-----Lt-~eEr~~li~~~~~~~~--grv 125 (356)
...||+-..+=-|.+ -..|.+...++++.+++.|++-|=|+|- |--+.. .+ .||..+++..+ +.+. .++
T Consensus 29 ~vMGIlNvTpDSFsd-~~~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI-~~l~~~~~v 106 (314)
T 3tr9_A 29 AVMGIINVSPNSFYH-PHLDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVI-DAIKKRFPQ 106 (314)
T ss_dssp EEEEEEECSTTCSBC-BCCSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHH-HHHHHHCCS
T ss_pred EEEEEEeCCCCchhh-ccCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHH-HHHHhhCCC
Confidence 356755544444765 5579999999999999999999998884 333322 33 45555555433 3222 245
Q ss_pred EEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018443 126 KVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNV 187 (356)
Q Consensus 126 pVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~ 187 (356)
||-+=+. ..+ -++.|.++|++-|--+.-. +.+ +-+..+++. .|+++-+.
T Consensus 107 pISIDT~--~~~----Va~aAl~aGa~iINDVsg~----~~~---~m~~v~a~~g~~vVlMh~ 156 (314)
T 3tr9_A 107 LISVDTS--RPR----VMREAVNTGADMINDQRAL----QLD---DALTTVSALKTPVCLMHF 156 (314)
T ss_dssp EEEEECS--CHH----HHHHHHHHTCCEEEETTTT----CST---THHHHHHHHTCCEEEECC
T ss_pred eEEEeCC--CHH----HHHHHHHcCCCEEEECCCC----Cch---HHHHHHHHhCCeEEEECC
Confidence 5544433 222 2334444587755444311 112 233444444 68777664
No 455
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=65.93 E-value=25 Score=31.68 Aligned_cols=167 Identities=11% Similarity=0.018 Sum_probs=0.0
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCcccc---cCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHH
Q 018443 72 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEG---QLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFA 148 (356)
Q Consensus 72 ~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~---~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~ 148 (356)
+.|+..+.+-++.+.+.|++-+-+==.-|-| .++.. .+++...+... ++|+-+..--++.++ +.+.+.+
T Consensus 36 saD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~----~~v~~lr~~~p-~~~ldvHLmv~~p~~---~i~~~~~ 107 (246)
T 3inp_A 36 SADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGP----MVLKALRDYGI-TAGMDVHLMVKPVDA---LIESFAK 107 (246)
T ss_dssp GSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCH----HHHHHHHHHTC-CSCEEEEEECSSCHH---HHHHHHH
T ss_pred cCChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCH----HHHHHHHHhCC-CCeEEEEEeeCCHHH---HHHHHHH
Q ss_pred cCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHhc----------CCCEEEEeecCc
Q 018443 149 VGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMAQ----------SPNLAGVKECVG 217 (356)
Q Consensus 149 ~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~P~~tG~~ls~~~l~~La~----------~pnivGiK~s~~ 217 (356)
+|||.+.+. .-+.+.+.+..+.+-+. .-+.+==+| .-+.+.++.+.+ .|.+-|-|.-..
T Consensus 108 aGAd~itvH-----~Ea~~~~~~~i~~ir~~G~k~Gvalnp-----~Tp~e~l~~~l~~vD~VlvMsV~PGfgGQ~fi~~ 177 (246)
T 3inp_A 108 AGATSIVFH-----PEASEHIDRSLQLIKSFGIQAGLALNP-----ATGIDCLKYVESNIDRVLIMSVNPGFGGQKFIPA 177 (246)
T ss_dssp HTCSEEEEC-----GGGCSCHHHHHHHHHTTTSEEEEEECT-----TCCSGGGTTTGGGCSEEEEECSCTTC--CCCCTT
T ss_pred cCCCEEEEc-----cccchhHHHHHHHHHHcCCeEEEEecC-----CCCHHHHHHHHhcCCEEEEeeecCCCCCcccchH
Q ss_pred h-hhHhhhhC--------CCeEEEecCcchhHhHHHHcCCceeecccc
Q 018443 218 N-DRVEHYTG--------NGIVVWSGNDDQCHDARWNHGATGVISVTS 256 (356)
Q Consensus 218 d-~~i~~~~~--------~~~~v~~G~d~~~l~~~l~~Ga~G~is~~~ 256 (356)
. .+++++.. -.+.|=.|-...-......+|+|.++.|.+
T Consensus 178 ~l~KI~~lr~~~~~~~~~~~I~VDGGI~~~ti~~~~~aGAD~~V~GSa 225 (246)
T 3inp_A 178 MLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVAGSA 225 (246)
T ss_dssp HHHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHTTTCCEEEESHH
T ss_pred HHHHHHHHHHHHHhcCCCeeEEEECCcCHHHHHHHHHcCCCEEEEehH
No 456
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=65.80 E-value=15 Score=34.32 Aligned_cols=85 Identities=9% Similarity=0.038 Sum_probs=48.9
Q ss_pred HHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcE-EEEecCCC--CHHHHH--HHHHHHHHcCCCE
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVK-VIGNTGSN--STREAI--HATEQGFAVGMHA 153 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvp-Vi~gvg~~--st~~ai--~lar~a~~~Gada 153 (356)
.++.+...+.|++|+++ |..| ++.+.+..+...- |.-|++.. +..+.- .-...+.++|+|.
T Consensus 161 ~~lA~~a~~~G~dGvV~----------s~~E----~~~IR~~~~~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~ 226 (303)
T 3ru6_A 161 INFSKISYENGLDGMVC----------SVFE----SKKIKEHTSSNFLTLTPGIRPFGETNDDQKRVANLAMARENLSDY 226 (303)
T ss_dssp HHHHHHHHHTTCSEEEC----------CTTT----HHHHHHHSCTTSEEEECCCCTTC--------CCSHHHHHHTTCSE
T ss_pred HHHHHHHHHcCCCEEEE----------CHHH----HHHHHHhCCCccEEECCCcCcccCCcccccccCCHHHHHHcCCCE
Confidence 34444556789999875 1122 2344455554433 34488744 233322 2456677899999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHHHH
Q 018443 154 ALHINPYYGKTSLEGLISHFDSVL 177 (356)
Q Consensus 154 vlv~pP~y~~~s~~~l~~y~~~va 177 (356)
+++-.|.|...++.+..+-+++..
T Consensus 227 iVvGr~I~~a~dp~~a~~~i~~~i 250 (303)
T 3ru6_A 227 IVVGRPIYKNENPRAVCEKILNKI 250 (303)
T ss_dssp EEECHHHHTSSCHHHHHHHHHHHH
T ss_pred EEEChHHhCCCCHHHHHHHHHHHH
Confidence 999998888777766554444433
No 457
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=65.77 E-value=64 Score=30.91 Aligned_cols=131 Identities=9% Similarity=0.004 Sum_probs=88.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEc-cCc--c-cccCCC---HHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHHHHHH
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVG-GTT--G-EGQLMS---WDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATE 144 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~-Gst--G-E~~~Lt---~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai~lar 144 (356)
-+.+.+.+.++.+++.|.+.+=+- |.. | .+...+ .++=.+.++.+.+.++.++++++=+ ++.+.++++++++
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~~~A~~~~~ 229 (404)
T 4e5t_A 150 NDADMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHGQFTVSGAKRLAR 229 (404)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCSCBCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCCCcCHHHHHHHHH
Confidence 367889999999999999998652 221 1 111222 4555678888888888888998855 4558999999999
Q ss_pred HHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEEEeecC
Q 018443 145 QGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV 216 (356)
Q Consensus 145 ~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~--~pnivGiK~s~ 216 (356)
..++.|++.+= -|.. ..+ .+.+++|.+. .||+.=. ...+++.++++.+ .-.++-+|-+.
T Consensus 230 ~l~~~~i~~iE--eP~~-~~~----~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~i~~~a~d~v~~d~~~ 292 (404)
T 4e5t_A 230 RLEAYDPLWFE--EPIP-PEK----PEDMAEVARYTSIPVATGE------RLCTKYEFSRVLETGAASILQMNLGR 292 (404)
T ss_dssp HHGGGCCSEEE--CCSC-TTC----HHHHHHHHHHCSSCEEECT------TCCHHHHHHHHHHHTCCSEECCCTTT
T ss_pred HHhhcCCcEEE--CCCC-ccc----HHHHHHHHhhCCCCEEeCC------CcCCHHHHHHHHHhCCCCEEecCccc
Confidence 99999987664 3421 112 3456777775 5766432 2345777888764 45788888654
No 458
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=65.61 E-value=19 Score=36.39 Aligned_cols=121 Identities=17% Similarity=0.104 Sum_probs=73.2
Q ss_pred ccCceeEeeecc--cCCCCCC--CHHHHHHHHHHHHHCC-----CCEEEEcc-Ccccc-cCCC-HHHHHHHHHHHHHHhC
Q 018443 55 KALRLITAIKTP--YLPDGRF--DLEAYDDLVNMQIVNG-----AEGMIVGG-TTGEG-QLMS-WDEHIMLIGHTVNCFG 122 (356)
Q Consensus 55 ~~~Gvi~al~TP--f~~dg~I--D~~~l~~~v~~li~~G-----v~Gl~v~G-stGE~-~~Lt-~eEr~~li~~~~~~~~ 122 (356)
+..||+-. || |.+.|+. |.+...++++.+++.| ++-|=|+| ||.=+ ...+ .||-.+++-.+.....
T Consensus 226 ~iMGIlNv--TPDSFsDGG~~~~~~~~al~~a~~mv~~G~~~~~AdIIDIGgeSTRPGa~~vs~eEEl~RvvpvI~~i~~ 303 (545)
T 2bmb_A 226 YIMAIFNA--TPDSFSDGGEHFADIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIRRSIPLIKAIRE 303 (545)
T ss_dssp EEEEEEEC--SCSSTTTTTTTTTCHHHHHHHHHHHHHHHHTTCSCEEEEEECSCCSTTCCCCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeC--CCCCCcCCCcCcCCHHHHHHHHHHHHHcCCCCCCceEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 35565554 66 8877865 8999999999999999 99998888 55333 2334 5566666654444322
Q ss_pred ----CCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeC
Q 018443 123 ----ASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNV 187 (356)
Q Consensus 123 ----grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~ 187 (356)
....+.+.|-+... +-++.|-++|||-|-=+.=. .. ++ +-+.-+++. +|+|+-+.
T Consensus 304 ~~~~~~~~vpISIDT~~a----~VaeaAl~aGadIINDVsg~--~~-d~---~m~~vva~~~~~~vVlmH~ 364 (545)
T 2bmb_A 304 STELPQDKVILSIDTYRS----NVAKEAIKVGVDIINDISGG--LF-DS---NMFAVIAENPEICYILSHT 364 (545)
T ss_dssp CSSSCGGGEEEEEECCCH----HHHHHHHHTTCCEEEETTTT--SS-CT---THHHHHHTCTTSEEEEECC
T ss_pred hccccCCCCeEEEeCCcH----HHHHHHHHcCCCEEEeCCCC--cC-Ch---HHHHHHHHhCCCeEEEECC
Confidence 11234455544333 33455666698877644321 11 22 335556666 58877765
No 459
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=65.55 E-value=11 Score=33.87 Aligned_cols=72 Identities=7% Similarity=0.007 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHCCCCEEEEccCc--c--cccCCCHHHHHHHHHHHHHHhC-CCcEEEEecCCCCHHHHHHHHHHHHHcCC
Q 018443 77 AYDDLVNMQIVNGAEGMIVGGTT--G--EGQLMSWDEHIMLIGHTVNCFG-ASVKVIGNTGSNSTREAIHATEQGFAVGM 151 (356)
Q Consensus 77 ~l~~~v~~li~~Gv~Gl~v~Gst--G--E~~~Lt~eEr~~li~~~~~~~~-grvpVi~gvg~~st~~ai~lar~a~~~Ga 151 (356)
.+...++..++.|++.|-+=--. + -+.+|+.+|+.++++.+.+.+. .++++|++= .. +.|.++||
T Consensus 44 ~~~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~liInd---~~-------~lA~~~gA 113 (243)
T 3o63_A 44 DLAQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRYGALFAVND---RA-------DIARAAGA 113 (243)
T ss_dssp CHHHHHHHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCEEEEES---CH-------HHHHHHTC
T ss_pred hHHHHHHHHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHHhhCCEEEEeC---HH-------HHHHHhCC
Confidence 47788888899999988763222 1 1346899999999888888654 478999861 12 23667899
Q ss_pred CEEEEcC
Q 018443 152 HAALHIN 158 (356)
Q Consensus 152 davlv~p 158 (356)
|+|-+..
T Consensus 114 dGVHLg~ 120 (243)
T 3o63_A 114 DVLHLGQ 120 (243)
T ss_dssp SEEEECT
T ss_pred CEEEecC
Confidence 9988753
No 460
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=65.54 E-value=8.4 Score=35.87 Aligned_cols=85 Identities=9% Similarity=0.104 Sum_probs=54.3
Q ss_pred CCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC---------CCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCC
Q 018443 122 GASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN---------PYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSR 190 (356)
Q Consensus 122 ~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~p---------P~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~ 190 (356)
.++.-++.|+-... .|+.++++|+|++.+.- |-....|-+++..|.+.|++. .| ++-|.|.
T Consensus 17 ~~~~i~~~~a~D~~------sA~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~~~P-viaD~d~- 88 (295)
T 1s2w_A 17 SKDLEFIMEAHNGL------SARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDASDVP-ILLDADT- 88 (295)
T ss_dssp SSSCEEEEEECSHH------HHHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHTCSSC-EEEECCS-
T ss_pred CCCcEEEecCCCHH------HHHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCC-EEecCCC-
Confidence 44544566776643 34556667999998873 222335668999999999987 69 8899984
Q ss_pred CCCCCCHH----HHHHHhcCCCEEEEeecCc
Q 018443 191 TGQDIPPR----VIHTMAQSPNLAGVKECVG 217 (356)
Q Consensus 191 tG~~ls~~----~l~~La~~pnivGiK~s~~ 217 (356)
|+. +++ ++.++.+ -++.|||.+.+
T Consensus 89 -Gyg-~~~~v~~~v~~l~~-aGaagv~iED~ 116 (295)
T 1s2w_A 89 -GYG-NFNNARRLVRKLED-RGVAGACLEDK 116 (295)
T ss_dssp -SCS-SHHHHHHHHHHHHH-TTCCEEEEECB
T ss_pred -CCC-CHHHHHHHHHHHHH-cCCcEEEECCC
Confidence 444 343 3344443 68999997654
No 461
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=65.41 E-value=78 Score=28.47 Aligned_cols=103 Identities=9% Similarity=0.026 Sum_probs=55.7
Q ss_pred CHHHHHHHHHHHHH--CCCCEEEEccCcccc--cCCCHHHHHHHHHHHHHHhCCCcEEEEecCC-CCHHHHHHHHHHHHH
Q 018443 74 DLEAYDDLVNMQIV--NGAEGMIVGGTTGEG--QLMSWDEHIMLIGHTVNCFGASVKVIGNTGS-NSTREAIHATEQGFA 148 (356)
Q Consensus 74 D~~~l~~~v~~li~--~Gv~Gl~v~GstGE~--~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~-~st~~ai~lar~a~~ 148 (356)
|.+.+...+..+-+ .+..-|+.+=+..|+ +.++.+||.++++.+.+...-. ++=+-- ...+..-++.+.+.+
T Consensus 61 ~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~~~~~~~~~ll~~~~~~~~~d---~iDvEl~~~~~~~~~l~~~a~~ 137 (258)
T 4h3d_A 61 NIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLISRDYYTTLNKEISNTGLVD---LIDVELFMGDEVIDEVVNFAHK 137 (258)
T ss_dssp CHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCCCCHHHHHHHHHHHHHTTCCS---EEEEEGGGCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCCCCHHHHHHHHHHHHhcCCch---hhHHhhhccHHHHHHHHHHHHh
Confidence 44556666665544 256667777776665 4577888888887776532111 111111 112222334445555
Q ss_pred cCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc
Q 018443 149 VGMHAALHINPYYGKTSLEGLISHFDSVLSM 179 (356)
Q Consensus 149 ~Gadavlv~pP~y~~~s~~~l~~y~~~va~~ 179 (356)
.|..-|+..--+-..|+.+++.+.|++..+.
T Consensus 138 ~~~kiI~S~Hdf~~TP~~~el~~~~~~~~~~ 168 (258)
T 4h3d_A 138 KEVKVIISNHDFNKTPKKEEIVSRLCRMQEL 168 (258)
T ss_dssp TTCEEEEEEEESSCCCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEEEecCCCCCCHHHHHHHHHHHHHh
Confidence 6654444332222346677777777777665
No 462
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=65.41 E-value=69 Score=29.58 Aligned_cols=81 Identities=9% Similarity=0.034 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCH--------------HHHH
Q 018443 75 LEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNST--------------REAI 140 (356)
Q Consensus 75 ~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st--------------~~ai 140 (356)
.+.+++.++.+.+.|++-|++=-..| +.=|.++-.++++..-+...-..|+++|++.-|. ..+.
T Consensus 176 ~~~l~~~i~~a~~~Gi~~IilDPG~G--f~kt~~~n~~ll~~l~~~~~~g~Pvl~G~Srksfig~l~g~p~~~~R~~~t~ 253 (294)
T 2dqw_A 176 KAFLEAQARRALSAGVPQVVLDPGFG--FGKLLEHNLALLRRLDEIVALGHPVLVGLSRKRTIGELSGVEDPAQRVHGSV 253 (294)
T ss_dssp HHHHHHHHHHHHHTTCSCEEEECCTT--SSCCHHHHHHHHHTHHHHHTTSSCBEECCTTCHHHHHHHTCCSGGGCHHHHH
T ss_pred HHHHHHHHHHHHHCCCCcEEEcCCCC--cccCHHHHHHHHHHHHHHhcCCCCEEEEeccchhhhhhcCCCchhhhHHHHH
Confidence 56788999999999998766544444 4558888999998887765567899999987443 3466
Q ss_pred HHHHHHHHcCCCEEEEc
Q 018443 141 HATEQGFAVGMHAALHI 157 (356)
Q Consensus 141 ~lar~a~~~Gadavlv~ 157 (356)
.++-.|...|++-+-+.
T Consensus 254 a~~~~a~~~Ga~IvRvH 270 (294)
T 2dqw_A 254 AAHLFAVMKGVRLLRVH 270 (294)
T ss_dssp HHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHcCCcEEEcC
Confidence 77778888999766554
No 463
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=65.41 E-value=46 Score=31.07 Aligned_cols=114 Identities=12% Similarity=0.092 Sum_probs=70.5
Q ss_pred HHHHHHHCCCCEEE----E-ccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEe--c---------CCCCHHHHHHHHH
Q 018443 81 LVNMQIVNGAEGMI----V-GGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGN--T---------GSNSTREAIHATE 144 (356)
Q Consensus 81 ~v~~li~~Gv~Gl~----v-~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~g--v---------g~~st~~ai~lar 144 (356)
-++..++.|++++- + .|+-.| .+.-.++-+.+-++..-.+|+++= + ...+.+-....+|
T Consensus 133 sVe~AvrlGADaV~~l~~i~~Gs~~e-----~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaR 207 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRINLSDAGT-----APTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVA 207 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEECTTCTTH-----HHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHH
T ss_pred CHHHHHHCCCCEEEEEEEECCCChhH-----HHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHH
Confidence 45555666999954 2 344444 334444444444455567887763 1 2357888888999
Q ss_pred HHHHcCCC----EEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCC-C-HHHHHHHhc---CCCEEEEe
Q 018443 145 QGFAVGMH----AALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDI-P-PRVIHTMAQ---SPNLAGVK 213 (356)
Q Consensus 145 ~a~~~Gad----avlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~l-s-~~~l~~La~---~pnivGiK 213 (356)
.|.++||| -+=+-.| +-|++|.++ .|+++=- |-.. + .++++.+.+ .++..|+=
T Consensus 208 iAaELGADs~~tivK~~y~-----------e~f~~Vv~a~~vPVViaG-----G~k~~~~~e~L~~v~~A~~~aGa~Gv~ 271 (307)
T 3fok_A 208 IAAGLGNDSSYTWMKLPVV-----------EEMERVMESTTMPTLLLG-----GEGGNDPDATFASWEHALTLPGVRGLT 271 (307)
T ss_dssp HHHTCSSCCSSEEEEEECC-----------TTHHHHGGGCSSCEEEEC-----CSCC--CHHHHHHHHHHTTSTTEEEEE
T ss_pred HHHHhCCCcCCCEEEeCCc-----------HHHHHHHHhCCCCEEEeC-----CCCCCCHHHHHHHHHHHHHhCCCeEEe
Confidence 99999999 6655222 126888776 5888763 3333 2 466666653 37888887
Q ss_pred ec
Q 018443 214 EC 215 (356)
Q Consensus 214 ~s 215 (356)
..
T Consensus 272 vG 273 (307)
T 3fok_A 272 VG 273 (307)
T ss_dssp EC
T ss_pred ec
Confidence 64
No 464
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=65.35 E-value=16 Score=41.36 Aligned_cols=92 Identities=10% Similarity=0.062 Sum_probs=55.2
Q ss_pred HHHHHCCCCEEEEccCccc----------ccCCCHHHHHHHHHHHHHH--hCCCcEEEEecCCCCHHHHHHHHHHHHHcC
Q 018443 83 NMQIVNGAEGMIVGGTTGE----------GQLMSWDEHIMLIGHTVNC--FGASVKVIGNTGSNSTREAIHATEQGFAVG 150 (356)
Q Consensus 83 ~~li~~Gv~Gl~v~GstGE----------~~~Lt~eEr~~li~~~~~~--~~grvpVi~gvg~~st~~ai~lar~a~~~G 150 (356)
..+.++|+|+|.+-|..|= ..-++..+=...+..++.. ..+++|||+.=|=.+-.+++ .|..+|
T Consensus 1046 ~~a~kAGAD~IvVsG~eGGTgasp~~~~~~~GlPt~~aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVa----kALaLG 1121 (1520)
T 1ofd_A 1046 AGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVV----MAALMG 1121 (1520)
T ss_dssp HHHHHTTCSEEEEECTTCCCSSEEHHHHHHBCCCHHHHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHH----HHHHTT
T ss_pred HHHHHcCCCEEEEeCCCCccCCCcchhhcCCchhHHHHHHHHHHHHHhcCCCCCceEEEECCCCCHHHHH----HHHHcC
Confidence 4567789999999666421 1224443322222222221 13489998854444455544 456789
Q ss_pred CCEEEEcCCCCC------------------------------CCCHHHHHHHHHHHHh
Q 018443 151 MHAALHINPYYG------------------------------KTSLEGLISHFDSVLS 178 (356)
Q Consensus 151 adavlv~pP~y~------------------------------~~s~~~l~~y~~~va~ 178 (356)
||+|.+-.++.. ....+.+..|++.+++
T Consensus 1122 AdaV~iGTafL~algc~~~r~Ch~~~CP~Gvatqdp~L~~~~~gg~e~V~n~l~~l~~ 1179 (1520)
T 1ofd_A 1122 AEEYGFGSIAMIAEGCIMARVCHTNNCPVGVATQQERLRQRFKGVPGQVVNFFYFIAE 1179 (1520)
T ss_dssp CSEEECSHHHHHHTTCCCCCCGGGTCCTTSSSCCCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred CCeeEEcHHHHHHHHHHHHHhccCCCCCceeEeeCHHHHhhcCCcHHHHHHHHHHHHH
Confidence 999998876522 2357888888888754
No 465
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=65.29 E-value=68 Score=29.72 Aligned_cols=110 Identities=17% Similarity=0.109 Sum_probs=69.3
Q ss_pred cCCCC-CCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHh-CCCcEEEEecCCCCHHHHHHHHH
Q 018443 67 YLPDG-RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCF-GASVKVIGNTGSNSTREAIHATE 144 (356)
Q Consensus 67 f~~dg-~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~-~grvpVi~gvg~~st~~ai~lar 144 (356)
|.+.+ .-|++...++++.+++.|++-|=|+|...+. =..+|-.+++..+.... ..++|+.+=+.. .++ ++
T Consensus 27 f~~~~~~~~~~~a~~~A~~~v~~GAdiIDIg~g~~~v--~~~eem~rvv~~i~~~~~~~~vpisIDT~~---~~V---~e 98 (300)
T 3k13_A 27 FLRLVNEKKYDEALSIARQQVEDGALVIDVNMDDGLL--DARTEMTTFLNLIMSEPEIARVPVMIDSSK---WEV---IE 98 (300)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTTCSEEEEECCCTTS--CHHHHHHHHHHHHHTCHHHHTSCEEEECSC---HHH---HH
T ss_pred HHHHHhcCCHHHHHHHHHHHHHCCCCEEEECCCCCCC--CHHHHHHHHHHHHHHhhhcCCCeEEEeCCC---HHH---HH
Confidence 54433 3689999999999999999999988843332 23567777776654210 126787766543 233 33
Q ss_pred HHHH--cCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018443 145 QGFA--VGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNV 187 (356)
Q Consensus 145 ~a~~--~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~ 187 (356)
.|-+ .|++-|--+ .....++.+.+.+..+++. .|+++-++
T Consensus 99 aaL~~~~Ga~iINdI---s~~~~d~~~~~~~~l~a~~ga~vV~mh~ 141 (300)
T 3k13_A 99 AGLKCLQGKSIVNSI---SLKEGEEVFLEHARIIKQYGAATVVMAF 141 (300)
T ss_dssp HHHHHCSSCCEEEEE---CSTTCHHHHHHHHHHHHHHTCEEEEESE
T ss_pred HHHHhcCCCCEEEeC---CcccCChhHHHHHHHHHHhCCeEEEEee
Confidence 4444 588755443 2222356666777777776 78887765
No 466
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=65.11 E-value=15 Score=32.85 Aligned_cols=79 Identities=14% Similarity=0.025 Sum_probs=49.7
Q ss_pred CCCCHHHHHHH-------HHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHH
Q 018443 71 GRFDLEAYDDL-------VNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHAT 143 (356)
Q Consensus 71 g~ID~~~l~~~-------v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~la 143 (356)
+.+..+.+.++ ++.|.+.|++.|+++++||=++. -.+--.++.+.+.+.. .+|++- +... .+
T Consensus 41 ~~~t~e~l~~~~~~l~~aa~~L~~ag~d~i~~aCtsas~~~-G~~~~~~~~~~l~~~~--~iPv~~-----~~~A---~~ 109 (240)
T 3ixl_A 41 GSVTPEGYDAVIESVVDHARRLQKQGAAVVSLMCTSLSFYR-GAAFNAALTVAMREAT--GLPCTT-----MSTA---VL 109 (240)
T ss_dssp CCSSHHHHHHHGGGHHHHHHHHHHTTEEEEEECCHHHHHTT-CHHHHHHHHHHHHHHH--SSCEEE-----HHHH---HH
T ss_pred CCCCHHHHHHHHHHHHHHHHHhccCCCCEEEECCcHHHHhc-ccchHHHHHHHHHhcc--CCCEEC-----HHHH---HH
Confidence 34556665555 67777899999998888875543 3343344555555543 578873 1222 23
Q ss_pred HHHHHcCCCEEEEcCCC
Q 018443 144 EQGFAVGMHAALHINPY 160 (356)
Q Consensus 144 r~a~~~Gadavlv~pP~ 160 (356)
+.++..|+..|-++.||
T Consensus 110 ~al~~~g~~rvglltpy 126 (240)
T 3ixl_A 110 NGLRALGVRRVALATAY 126 (240)
T ss_dssp HHHHHTTCSEEEEEESS
T ss_pred HHHHHhCCCEEEEEeCC
Confidence 33455799999888884
No 467
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=65.10 E-value=18 Score=33.61 Aligned_cols=72 Identities=10% Similarity=0.085 Sum_probs=34.2
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHH
Q 018443 72 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGF 147 (356)
Q Consensus 72 ~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~ 147 (356)
.++.+.-.++++..++.--+--++.|+.+. +.+|-.++.+.+.+.-.+.+-++.--...+.++.+++-+...
T Consensus 57 ~Lt~~Er~~v~~~~v~~~grvpViaGvg~~----~t~~ai~la~~A~~~Gadavlv~~P~~~~s~~~l~~~f~~va 128 (313)
T 3dz1_A 57 KLDAAEAEAVATRFIKRAKSMQVIVGVSAP----GFAAMRRLARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQAT 128 (313)
T ss_dssp GSCHHHHHHHHHHHHHHCTTSEEEEECCCS----SHHHHHHHHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEecCCC----CHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHH
Confidence 466666667777666542011123343333 666666666666554222222211112234555555554443
No 468
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=64.95 E-value=18 Score=34.42 Aligned_cols=59 Identities=10% Similarity=0.044 Sum_probs=39.0
Q ss_pred CcEEEEecCCC-CHHHHHHHHHHHHHcCCCEEEEc------CCCCC-CCCHHHHHHHHHHHHhc--CCeE
Q 018443 124 SVKVIGNTGSN-STREAIHATEQGFAVGMHAALHI------NPYYG-KTSLEGLISHFDSVLSM--GPTI 183 (356)
Q Consensus 124 rvpVi~gvg~~-st~~ai~lar~a~~~Gadavlv~------pP~y~-~~s~~~l~~y~~~va~~--~Pii 183 (356)
+.-||+|.++. +.+.++++++.++++|+|++-.. .||-+ .+..++ ...++++++. +|++
T Consensus 106 ~~~vIAgpcs~es~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~eg-l~~l~~~~~e~Gl~~~ 174 (350)
T 1vr6_A 106 YFTIIAGPCSVEGREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKG-LEYLREAADKYGMYVV 174 (350)
T ss_dssp EEEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHH-HHHHHHHHHHHTCEEE
T ss_pred CeEEEEeCCCcCCHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHH-HHHHHHHHHHcCCcEE
Confidence 34578887665 88999999999999999986442 23222 234444 4555666655 4554
No 469
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=64.88 E-value=12 Score=32.36 Aligned_cols=67 Identities=9% Similarity=-0.023 Sum_probs=46.1
Q ss_pred HHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCC-----HHHHHHHHHHHHHcCCCE
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS-----TREAIHATEQGFAVGMHA 153 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~s-----t~~ai~lar~a~~~Gada 153 (356)
.+.++.+.+.|++.+.+-..+|.. .++.+.+.. .+.+...++... .+.....++.+.+.|+++
T Consensus 68 ~~~v~~~~~~Gad~vtvh~~~g~~----------~i~~~~~~~--gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G 135 (208)
T 2czd_A 68 RLIARKVFGAGADYVIVHTFVGRD----------SVMAVKELG--EIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFG 135 (208)
T ss_dssp HHHHHHHHHTTCSEEEEESTTCHH----------HHHHHHTTS--EEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSE
T ss_pred HHHHHHHHhcCCCEEEEeccCCHH----------HHHHHHHhC--CcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcE
Confidence 567888889999999988888732 254554433 566776665433 334556788888889988
Q ss_pred EEEc
Q 018443 154 ALHI 157 (356)
Q Consensus 154 vlv~ 157 (356)
+.+.
T Consensus 136 ~~~~ 139 (208)
T 2czd_A 136 VIAP 139 (208)
T ss_dssp EECC
T ss_pred EEEC
Confidence 8655
No 470
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=64.62 E-value=6.1 Score=35.67 Aligned_cols=63 Identities=10% Similarity=-0.016 Sum_probs=42.6
Q ss_pred EEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEE--Ee-CCCCCC
Q 018443 128 IGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTII--YN-VPSRTG 192 (356)
Q Consensus 128 i~gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~Piil--Yn-~P~~tG 192 (356)
++-.+.++.+.+.+.++...+.|+|++.+-- -...+.+.+.+..+++.+. .|+++ |+ +|-..|
T Consensus 11 ~i~~gDP~~~~t~~~~~~l~~~GaD~ielG~--S~Gvt~~~~~~~v~~ir~~~~Pivlm~y~~n~i~~G 77 (240)
T 1viz_A 11 HVFKLDPNKDLPDEQLEILCESGTDAVIIGG--SDGVTEDNVLRMMSKVRRFLVPCVLEVSAIEAIVPG 77 (240)
T ss_dssp EEEEECTTSCCCHHHHHHHHTSCCSEEEECC------CHHHHHHHHHHHTTSSSCEEEECSCGGGCCSC
T ss_pred EEEeeCCCccccHHHHHHHHHcCCCEEEECC--CCCCCHHHHHHHHHHhhCcCCCEEEecCccccccCC
Confidence 3444556566667778888999999999975 2345677788888888764 69886 65 554333
No 471
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=64.50 E-value=26 Score=31.98 Aligned_cols=65 Identities=12% Similarity=0.055 Sum_probs=40.8
Q ss_pred HHHHHHHHHCCCCEEEEccCcccccCCCHHHH----------HHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHH
Q 018443 79 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEH----------IMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFA 148 (356)
Q Consensus 79 ~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr----------~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~ 148 (356)
.++++.+.+.|++++-+... .+.+.+ .+.++.+.+.+ ++|++++..-.+ .+.++.+.+
T Consensus 31 ~~~a~~~~~~Ga~~i~~~e~------v~~~~~~~~G~~~~~~~~~i~~i~~~~--~~Pvi~~~~~~~----~~~~~~~~~ 98 (297)
T 2zbt_A 31 PEQAVIAEEAGAVAVMALER------VPADIRAQGGVARMSDPKIIKEIMAAV--SIPVMAKVRIGH----FVEAMILEA 98 (297)
T ss_dssp HHHHHHHHHHTCSEEEECSS------CHHHHHHTTCCCCCCCHHHHHHHHTTC--SSCEEEEEETTC----HHHHHHHHH
T ss_pred HHHHHHHHHCCCcEEEeccc------cchHHHhhcCCccCCCHHHHHHHHHhc--CCCeEEEeccCC----HHHHHHHHH
Confidence 47788888999999976421 111111 23444444433 579887643322 566777888
Q ss_pred cCCCEEE
Q 018443 149 VGMHAAL 155 (356)
Q Consensus 149 ~Gadavl 155 (356)
+|||++.
T Consensus 99 aGad~v~ 105 (297)
T 2zbt_A 99 IGVDFID 105 (297)
T ss_dssp TTCSEEE
T ss_pred CCCCEEe
Confidence 9999993
No 472
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=64.45 E-value=48 Score=29.43 Aligned_cols=40 Identities=15% Similarity=0.072 Sum_probs=19.4
Q ss_pred HHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCC
Q 018443 112 MLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMH 152 (356)
Q Consensus 112 ~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gad 152 (356)
++++.+++.++++++|-+.=|-.+.++++++.+.+ ++|++
T Consensus 172 ~lm~~~i~~~g~~v~vKaaGGirt~~~al~~i~a~-~~Ga~ 211 (226)
T 1vcv_A 172 AAIARYIKEKGYRLGVKMAGGIRTREQAKAIVDAI-GWGED 211 (226)
T ss_dssp HHHHHHHHHHTCCCEEEEESSCCSHHHHHHHHHHH-CSCSC
T ss_pred HHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHH-HCCCC
Confidence 34444444445555554322333455555555555 35555
No 473
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=64.32 E-value=48 Score=32.22 Aligned_cols=112 Identities=12% Similarity=0.062 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCC--C-HHHHHHHHHHHHHcCC
Q 018443 75 LEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN--S-TREAIHATEQGFAVGM 151 (356)
Q Consensus 75 ~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~--s-t~~ai~lar~a~~~Ga 151 (356)
.+.++++++..++.|+.|+-...+..-....+.+|-.++++.+.+ . ..++.+++-.. . .+..-+..+.+++.|+
T Consensus 166 l~~m~~l~~~~~~~Ga~g~~~~~~y~p~~~~~~~el~~~~~~a~~-~--g~~v~~H~~~~~~~~~~a~~e~i~la~~~g~ 242 (480)
T 3gip_A 166 QQAMQDMLQAALEAGAVGFSTGLAYQPGAVAQAAELEGLARVAAE-R--RRLHTSHIRNEADGVEAAVEEVLAIGRGTGC 242 (480)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEETTSTTGGGCCHHHHHHHHHHHHH-T--TCEEEEECSCSSTTHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHCCCcEEeecCccCCcccCCHHHHHHHHHHHHH-c--CCEEEEEecCccccHHHHHHHHHHHHHHhCC
Confidence 456677777777899999865433322345688888888865544 2 34677776432 1 2222233344445565
Q ss_pred CEEEEcCCCCCCC---CHHHHHHHHHHHHhc-CCeEEEeCCC
Q 018443 152 HAALHINPYYGKT---SLEGLISHFDSVLSM-GPTIIYNVPS 189 (356)
Q Consensus 152 davlv~pP~y~~~---s~~~l~~y~~~va~~-~PiilYn~P~ 189 (356)
.-.+..--...+. +.++.++..++..+. .+|..--.|.
T Consensus 243 ~v~i~H~s~~~~~~~~~~~~~l~~i~~a~~~G~~Vt~e~~p~ 284 (480)
T 3gip_A 243 ATVVSHHKCMMPQNWGRSRATLANIDRAREQGVEVALDIYPY 284 (480)
T ss_dssp EEEETTCCCCSGGGTTTHHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CEEEEEEeccCccchhhHHHHHHHHHHHHHcCCceEEEeecc
Confidence 4332221111110 124445555554444 4655444443
No 474
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=64.22 E-value=25 Score=33.63 Aligned_cols=101 Identities=15% Similarity=0.092 Sum_probs=74.0
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcC
Q 018443 71 GRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVG 150 (356)
Q Consensus 71 g~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~G 150 (356)
.+.|.+-+.+.++.+.+. ++.|.++-|.|= +++.+-.++++.+.+.++.++|+=+++ +++.--++.-+-.|.++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~-a~~i~l~DT~G~---~~P~~~~~lv~~l~~~~~~~~~i~~H~-Hnd~GlAvAN~laAv~aG 214 (382)
T 2ztj_A 140 FRSEEQDLLAVYEAVAPY-VDRVGLADTVGV---ATPRQVYALVREVRRVVGPRVDIEFHG-HNDTGCAIANAYEAIEAG 214 (382)
T ss_dssp TTSCHHHHHHHHHHHGGG-CSEEEEEETTSC---CCHHHHHHHHHHHHHHHTTTSEEEEEE-BCTTSCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHh-cCEEEecCCCCC---CCHHHHHHHHHHHHHhcCCCCeEEEEe-CCCccHHHHHHHHHHHhC
Confidence 367888999999999999 999988888885 678898899988887643456665554 566777888888888999
Q ss_pred CCEEEEcCCCCC----CCCHHHHHHHHHHH
Q 018443 151 MHAALHINPYYG----KTSLEGLISHFDSV 176 (356)
Q Consensus 151 adavlv~pP~y~----~~s~~~l~~y~~~v 176 (356)
|+.|=..---++ .++-++++..+...
T Consensus 215 a~~vd~tv~GlGeraGN~~lE~vv~~L~~~ 244 (382)
T 2ztj_A 215 ATHVDTTILGIGERNGITPLGGFLARMYTL 244 (382)
T ss_dssp CCEEEEBGGGCSSTTCBCBHHHHHHHHHHH
T ss_pred CCEEEEccccccccccchhHHHHHHHHHhh
Confidence 998876543332 34556666554433
No 475
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=64.08 E-value=74 Score=28.76 Aligned_cols=80 Identities=8% Similarity=0.012 Sum_probs=40.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCC---CcEEEEecCCCCHHHHHHHHHHHHHc-
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA---SVKVIGNTGSNSTREAIHATEQGFAV- 149 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~g---rvpVi~gvg~~st~~ai~lar~a~~~- 149 (356)
|+++....+++|++.|..-|.+.+... .-+..+|.+-+..+.+..+- ...++ -.+..+.+...+.++...+.
T Consensus 162 ~~~~~~~a~~~L~~~G~~~I~~i~~~~---~~~~~~R~~Gf~~al~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~ 237 (339)
T 3h5o_A 162 QEDAGAAITRHLLSRGKRRIGFLGAQL---DERVMKRLDGYRAALDAADCRDAGLEWL-DPQPSSMQMGADMLDRALAER 237 (339)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEEEESC---CHHHHHHHHHHHHHHHHTTCCCGGGEEE-ECSCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEeCCC---CccHHHHHHHHHHHHHHCCCCCCChheE-ecCCCCHHHHHHHHHHHHcCC
Confidence 445566667777777766554444222 12345666666665554432 11222 23344555555555554433
Q ss_pred -CCCEEEEc
Q 018443 150 -GMHAALHI 157 (356)
Q Consensus 150 -Gadavlv~ 157 (356)
..||+++.
T Consensus 238 ~~~~ai~~~ 246 (339)
T 3h5o_A 238 PDCDALFCC 246 (339)
T ss_dssp TTCCEEEES
T ss_pred CCCcEEEEC
Confidence 45666653
No 476
>2d2r_A Undecaprenyl pyrophosphate synthase; prenyltransferase, transferase; 1.88A {Helicobacter pylori} PDB: 2dtn_A
Probab=64.04 E-value=19 Score=32.56 Aligned_cols=121 Identities=17% Similarity=0.122 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHh--------CC--CcEEEEecC--CCCHHHHHHH
Q 018443 75 LEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCF--------GA--SVKVIGNTG--SNSTREAIHA 142 (356)
Q Consensus 75 ~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~--------~g--rvpVi~gvg--~~st~~ai~l 142 (356)
.+.+++.++++.+.||.-+.+-.-+.|.+.=+.+|-..|++...+.. .. ++.+|.... ..++.+.++.
T Consensus 45 ~~~l~~iv~~c~~~GI~~lTlYaFSteNwkRp~~EV~~Lm~l~~~~l~~~~~~l~~~~vrl~~iG~~~~lp~~~~~~i~~ 124 (245)
T 2d2r_A 45 VKTLKDITIWCANHKLECLTLYAFSTENWKRPKSEVDFLMKMLKKYLKDERSTYLDNNIRFRAIGDLEGFSKELRDTILQ 124 (245)
T ss_dssp HHHHHHHHHHHHTTTCSEEEEECC----------CHHHHHHHHHHHHHHHHHHHHHTTCEEEEESCGGGSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeccCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEecChhhCCHHHHHHHHH
Confidence 57899999999999999999999999999888888777765543322 12 333432222 1234555555
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHHH
Q 018443 143 TEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHTM 203 (356)
Q Consensus 143 ar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~~PiilYn~P~~tG~~ls~~~l~~L 203 (356)
++..-+.+-...+.+.=.|. +.++|++-.+.+++..-- . ..--+++.+++.+-
T Consensus 125 a~~~T~~n~~l~lnia~~Yg--gR~EIv~A~r~i~~~v~~---~---l~~~~I~e~~i~~~ 177 (245)
T 2d2r_A 125 LENDTRHFKDFTQVLALNYG--SKNELSRAFKSLLESPPS---N---ISLLESLENEISNR 177 (245)
T ss_dssp HHHHHTTCCSCEEEEECSCC--HHHHHHHHHHHHHHSCCT---T---GGGCSCCHHHHHTT
T ss_pred HHHHhcCCCceEEEEEecCC--CHHHHHHHHHHHHHHHHh---c---CChhhCCHHHHHHH
Confidence 55544433333333332343 679999999999986211 1 11235666666543
No 477
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=64.02 E-value=35 Score=30.41 Aligned_cols=76 Identities=9% Similarity=0.063 Sum_probs=48.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEE-e-----------cCCCCHHHHH
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG-N-----------TGSNSTREAI 140 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~-g-----------vg~~st~~ai 140 (356)
-|.+...+.++.+++.+++|+++.+...+.. . ..++.+ ...++||+. + |+..+.+-.-
T Consensus 42 ~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~----~---~~~~~~---~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~ 111 (313)
T 3m9w_A 42 GNEETQMSQIENMINRGVDVLVIIPYNGQVL----S---NVVKEA---KQEGIKVLAYDRMINDADIDFYISFDNEKVGE 111 (313)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEEECSSTTSC----H---HHHHHH---HTTTCEEEEESSCCTTSCCSEEEEECHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCChhhh----H---HHHHHH---HHCCCeEEEECCcCCCCCceEEEecCHHHHHH
Confidence 4677788899999999999999988754421 1 122222 234677653 2 2223345566
Q ss_pred HHHHHHH-HcCCCEEEEcC
Q 018443 141 HATEQGF-AVGMHAALHIN 158 (356)
Q Consensus 141 ~lar~a~-~~Gadavlv~p 158 (356)
..+++.. +.|..-+.++.
T Consensus 112 ~a~~~L~~~~G~~~i~~i~ 130 (313)
T 3m9w_A 112 LQAKALVDIVPQGNYFLMG 130 (313)
T ss_dssp HHHHHHHHHCSSEEEEEEE
T ss_pred HHHHHHHHhCCCCcEEEEE
Confidence 6777777 78887776664
No 478
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=63.98 E-value=1e+02 Score=29.35 Aligned_cols=131 Identities=11% Similarity=0.037 Sum_probs=89.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccC--ccc-----ccCC----CHHHHHHHHHHHHHHhCCCcEEEEec-CCCCHHHHH
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGT--TGE-----GQLM----SWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAI 140 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~Gs--tGE-----~~~L----t~eEr~~li~~~~~~~~grvpVi~gv-g~~st~~ai 140 (356)
++.+.+.+.+....+.|.+++=+-.. .|- .-.+ ..++=.+.++.+.+.++.++++.+-+ ++.+.++++
T Consensus 148 ~~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vDan~~~~~~~a~ 227 (410)
T 2qq6_A 148 GSNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARVAAVREAVGPEVEVAIDMHGRFDIPSSI 227 (410)
T ss_dssp THHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHH
Confidence 57788989999999999999855331 121 0011 22444577778888888889998865 456899999
Q ss_pred HHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEEEeecC
Q 018443 141 HATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV 216 (356)
Q Consensus 141 ~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~--~pnivGiK~s~ 216 (356)
++++..++.|++.+ --|.- +. =.+.++++.+. .||+.=. .-.+++.++++.+ .-+++-+|-+-
T Consensus 228 ~~~~~l~~~~i~~i--EeP~~--~~---d~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~ 294 (410)
T 2qq6_A 228 RFARAMEPFGLLWL--EEPTP--PE---NLDALAEVRRSTSTPICAGE------NVYTRFDFRELFAKRAVDYVMPDVAK 294 (410)
T ss_dssp HHHHHHGGGCCSEE--ECCSC--TT---CHHHHHHHHTTCSSCEEECT------TCCSHHHHHHHHHTTCCSEECCBHHH
T ss_pred HHHHHHhhcCCCeE--ECCCC--hh---hHHHHHHHHhhCCCCEEeCC------CcCCHHHHHHHHHcCCCCEEecCccc
Confidence 99999999998854 34431 11 15566777776 5766533 2346788888873 56888898653
No 479
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=63.84 E-value=76 Score=27.82 Aligned_cols=134 Identities=12% Similarity=-0.023 Sum_probs=71.8
Q ss_pred HHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEe------cCCCC-------HHHHHHHHH
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGN------TGSNS-------TREAIHATE 144 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~g------vg~~s-------t~~ai~lar 144 (356)
+...++.+.+.|.+||=+....... .+.++..++.+ .++..+=++..+.+ .++.+ .+...+.++
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~--~~~~~~~~~~~-~l~~~gl~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~ 95 (290)
T 2qul_A 19 FPATAKRIAGLGFDLMEISLGEFHN--LSDAKKRELKA-VADDLGLTVMCCIGLKSEYDFASPDKSVRDAGTEYVKRLLD 95 (290)
T ss_dssp HHHHHHHHHHTTCSEEEEESTTGGG--SCHHHHHHHHH-HHHHHTCEEEEEEEECGGGCTTCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEecCCccc--cchhhHHHHHH-HHHHcCCceEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 5677777888999999765543222 23444444444 34434323333322 12222 244566777
Q ss_pred HHHHcCCCEEEEcC----CC--C-CC-CCHH---HHHHHHHHHHhc-----CCeEEEeCCCCCC-CCCCHHHHHHHhc--
Q 018443 145 QGFAVGMHAALHIN----PY--Y-GK-TSLE---GLISHFDSVLSM-----GPTIIYNVPSRTG-QDIPPRVIHTMAQ-- 205 (356)
Q Consensus 145 ~a~~~Gadavlv~p----P~--y-~~-~s~~---~l~~y~~~va~~-----~PiilYn~P~~tG-~~ls~~~l~~La~-- 205 (356)
.|+++|+..+.+.. .. + .. ..++ .+.+.++++++. +.+.+-|.+...+ .--+++.+.+|.+
T Consensus 96 ~a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~~ 175 (290)
T 2qul_A 96 DCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYALEVVNRFEQWLCNDAKEAIAFADAV 175 (290)
T ss_dssp HHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEEECCCTTTCSSCCSHHHHHHHHHHH
T ss_pred HHHHcCCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCccccccccCCHHHHHHHHHHc
Confidence 88899999887521 11 1 11 2333 344555555442 4677877763222 2235777777763
Q ss_pred -CCCEEEEee
Q 018443 206 -SPNLAGVKE 214 (356)
Q Consensus 206 -~pnivGiK~ 214 (356)
.||+.-.=|
T Consensus 176 ~~~~~g~~~D 185 (290)
T 2qul_A 176 DSPACKVQLD 185 (290)
T ss_dssp CCTTEEEEEE
T ss_pred CCCCEEEEEE
Confidence 467643333
No 480
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=63.63 E-value=61 Score=28.02 Aligned_cols=58 Identities=16% Similarity=0.143 Sum_probs=37.6
Q ss_pred HHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEc
Q 018443 80 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 80 ~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~ 157 (356)
..++..++.|++++...++ + ..+++.+.+ . .++++.|+. +..| +..|.+.|+|.+-+.
T Consensus 74 d~~~~A~~~GAd~v~~~~~-------d----~~v~~~~~~-~--g~~~i~G~~--t~~e----~~~A~~~Gad~v~~f 131 (207)
T 2yw3_A 74 KEAEAALEAGAAFLVSPGL-------L----EEVAALAQA-R--GVPYLPGVL--TPTE----VERALALGLSALKFF 131 (207)
T ss_dssp HHHHHHHHHTCSEEEESSC-------C----HHHHHHHHH-H--TCCEEEEEC--SHHH----HHHHHHTTCCEEEET
T ss_pred HHHHHHHHcCCCEEEcCCC-------C----HHHHHHHHH-h--CCCEEecCC--CHHH----HHHHHHCCCCEEEEe
Confidence 5677788899999974432 1 134444443 2 357888864 3444 466778899999883
No 481
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=63.57 E-value=72 Score=27.49 Aligned_cols=81 Identities=9% Similarity=0.000 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCc-EEEEecCCCCHHHHHHHHHHHHHc--CC
Q 018443 75 LEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASV-KVIGNTGSNSTREAIHATEQGFAV--GM 151 (356)
Q Consensus 75 ~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grv-pVi~gvg~~st~~ai~lar~a~~~--Ga 151 (356)
+++-+..+++|++.|..-+.+.+...+ .-+..+|.+-+..+.+..+-.. +...-.+..+.+++.+.++...+. ..
T Consensus 105 ~~~~~~a~~~L~~~G~~~i~~i~~~~~--~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 182 (275)
T 3d8u_A 105 FEVGKACTRHLIEQGFKNVGFIGARGN--HSTLQRQLHGWQSAMIENYLTPDHFLTTHEAPSSQLGAEGLAKLLLRDSSL 182 (275)
T ss_dssp HHHHHHHHHHHHTTTCCCEEEEECSCS--SHHHHHHHHHHHHHHHHTTCCCCCEEECSSCCCHHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHHHHHHHHCCCCeEEEEcCCCC--CchHHHHHHHHHHHHHHcCCCCCccEEEeCCCChhHHHHHHHHHHhCCCCC
Confidence 445566677777777665544433221 2234567666666665543222 122223444566666666655443 36
Q ss_pred CEEEEc
Q 018443 152 HAALHI 157 (356)
Q Consensus 152 davlv~ 157 (356)
|+++..
T Consensus 183 ~ai~~~ 188 (275)
T 3d8u_A 183 NALVCS 188 (275)
T ss_dssp CEEEES
T ss_pred CEEEEc
Confidence 666654
No 482
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=63.49 E-value=8 Score=36.05 Aligned_cols=89 Identities=19% Similarity=0.126 Sum_probs=50.8
Q ss_pred HHHHHCCCCEEEEccC--ccc-----------------ccCCCHHH----------HHHHHHHHHHHhCCCcEEE-EecC
Q 018443 83 NMQIVNGAEGMIVGGT--TGE-----------------GQLMSWDE----------HIMLIGHTVNCFGASVKVI-GNTG 132 (356)
Q Consensus 83 ~~li~~Gv~Gl~v~Gs--tGE-----------------~~~Lt~eE----------r~~li~~~~~~~~grvpVi-~gvg 132 (356)
.+.++.|++.|.+.|. ||. ..+|+.++ -.++++.+.+.+ ++||+ +..|
T Consensus 139 ~~a~~~Gad~I~v~g~~gTG~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~~--~iPVivvA~G 216 (297)
T 4adt_A 139 LRRISEGASMIRTKGEAGTGNIIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLTRKLK--RLPVVNFAAG 216 (297)
T ss_dssp HHHHHHTCSEEEECCCTTSCCCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHHHT--SCSSEEEEES
T ss_pred HHHHhCCCCEEEECCCcCCCchHHHHHHHHHhhhhhhhhccccccccccccccCCCCHHHHHHHHHhc--CCCeEEEecC
Confidence 3445779999999875 452 11122222 124555555544 56775 3555
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHH
Q 018443 133 SNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSV 176 (356)
Q Consensus 133 ~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~v 176 (356)
+.++.+.+ +.+.++|||++++..-.+...++....+-|.+.
T Consensus 217 GI~t~~dv---~~~~~~GAdgVlVGsai~~a~dp~~~~~~l~~a 257 (297)
T 4adt_A 217 GIATPADA---AMCMQLGMDGVFVGSGIFESENPQKMASSIVMA 257 (297)
T ss_dssp CCCSHHHH---HHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHH
T ss_pred CCCCHHHH---HHHHHcCCCEEEEhHHHHcCCCHHHHHHHHHHH
Confidence 55333333 444568999999987666556665555444443
No 483
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=63.49 E-value=18 Score=34.50 Aligned_cols=86 Identities=12% Similarity=0.108 Sum_probs=55.0
Q ss_pred cEEEEecCC---CCHHHHHHHHHHHHHcCCCEEEEc--------CCCC--CC----------------CCHHHHHHHHHH
Q 018443 125 VKVIGNTGS---NSTREAIHATEQGFAVGMHAALHI--------NPYY--GK----------------TSLEGLISHFDS 175 (356)
Q Consensus 125 vpVi~gvg~---~st~~ai~lar~a~~~Gadavlv~--------pP~y--~~----------------~s~~~l~~y~~~ 175 (356)
.-||+++|. .|.+.+.++++.|+++|||++=.. .|+. +. .+.+++ ....+
T Consensus 20 ~~iIAe~g~NH~gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~-~~L~~ 98 (349)
T 2wqp_A 20 PLIICEIGINHEGSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDE-IKLKE 98 (349)
T ss_dssp CEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHH-HHHHH
T ss_pred eEEEEecCCcccCCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHH-HHHHH
Confidence 568988764 389999999999999999999775 5643 32 233332 33333
Q ss_pred HHhcCCeEEEeCCCCCCCCCCHHHHHHHhcCCCEEEEeecCch
Q 018443 176 VLSMGPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKECVGN 218 (356)
Q Consensus 176 va~~~PiilYn~P~~tG~~ls~~~l~~La~~pnivGiK~s~~d 218 (356)
.++..-+.+.--| ++++.+..|.++ ++-.+|..+++
T Consensus 99 ~~~~~Gi~~~st~------~d~~svd~l~~~-~v~~~KI~S~~ 134 (349)
T 2wqp_A 99 YVESKGMIFISTL------FSRAAALRLQRM-DIPAYKIGSGE 134 (349)
T ss_dssp HHHHTTCEEEEEE------CSHHHHHHHHHH-TCSCEEECGGG
T ss_pred HHHHhCCeEEEee------CCHHHHHHHHhc-CCCEEEECccc
Confidence 4444455544433 556666666553 23458888887
No 484
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=63.47 E-value=13 Score=36.35 Aligned_cols=88 Identities=10% Similarity=-0.008 Sum_probs=0.0
Q ss_pred HHHHHHCCCCEE--EEccCcc-----cccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCC--------------------
Q 018443 82 VNMQIVNGAEGM--IVGGTTG-----EGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN-------------------- 134 (356)
Q Consensus 82 v~~li~~Gv~Gl--~v~GstG-----E~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~-------------------- 134 (356)
++.+.+.|+.++ +...+++ .+..++.++-.++++.+.+. ..+|.+++...
T Consensus 154 l~~l~~~G~~~~K~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e~~~~~~~~~~~~~~~g~~~~~~ 230 (473)
T 3e74_A 154 LHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGEL---GQPVLVHCENALICDELGEEAKREGRVTAHD 230 (473)
T ss_dssp HHHHHHHTCSCEEEEC------------CCCCHHHHHHHHHHHHHH---TCCEEEECSCHHHHHHHHHHHHHHTCCSHHH
T ss_pred HHHHHHcCCCEEEEeccccCCcccccccCCCCHHHHHHHHHHHHhc---CCeEEEEecCHHHHHHHhhHHHhcCCcChhh
Q ss_pred ---------------------------------CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHH
Q 018443 135 ---------------------------------STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISH 172 (356)
Q Consensus 135 ---------------------------------st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y 172 (356)
|+.+++++++.|++.|.....-+.|.|...+++++..+
T Consensus 231 ~~~~~p~~~e~~av~~~l~la~~~g~~lhi~Hvst~~~l~li~~ak~~G~~vt~e~~ph~l~l~~~~~~~~ 301 (473)
T 3e74_A 231 YVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHVSSPEGVEEVTRARQEGQDITCESCPHYFVLDTDQFEEI 301 (473)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHHHHTCCEEECSCCSHHHHHHHHHHHHTTCCEEEEECTHHHHCCHHHHHHH
T ss_pred cccCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHHHcCCCeEEEEchHhhhcCHHHHhCC
No 485
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=63.44 E-value=38 Score=30.08 Aligned_cols=118 Identities=6% Similarity=-0.086 Sum_probs=64.8
Q ss_pred HHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEc
Q 018443 78 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 157 (356)
Q Consensus 78 l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~ 157 (356)
.+.+++.+-+.||++.++.+.. ... .+-..+++.+ +..++|+--++|+--... .+..+++.+.|+.||-+.
T Consensus 42 ~~~~l~~m~~~GV~~~v~~~~~-~~~----~~n~~~~~~~-~~~p~r~~~~~~v~p~~~---~~el~~~~~~g~~Gi~~~ 112 (288)
T 2ffi_A 42 LGDYLGQLRAHGFSHGVLVQPS-FLG----TDNRYLLSAL-QTVPGQLRGVVMLERDVE---QATLAEMARLGVRGVRLN 112 (288)
T ss_dssp HHHHHHHHHHTSCCEECCBCCG-GGT----TCCHHHHHHH-HHSTTTBCCBBCCCSSCC---HHHHHHHHTTTCCEEECC
T ss_pred HHHHHHHHHHhCCCeEEEECCc-ccc----ccHHHHHHHH-HHCCCCEEEEEEeCCCCC---HHHHHHHHHCCCeEEEEe
Confidence 3445555668899998877642 111 1112244433 334455544455532222 234444556799999554
Q ss_pred CCCCC---CCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHh-cCCCEEEE
Q 018443 158 NPYYG---KTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMA-QSPNLAGV 212 (356)
Q Consensus 158 pP~y~---~~s~~~l~~y~~~va~~-~PiilYn~P~~tG~~ls~~~l~~La-~~pnivGi 212 (356)
|.+. ..+.+.+...|+.+.+. +||+++--+. .+..+.+++ ++| +..+
T Consensus 113 -~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~~~------~~~~~~~~~~~~p-l~~v 164 (288)
T 2ffi_A 113 -LMGQDMPDLTGAQWRPLLERIGEQGWHVELHRQVA------DIPVLVRALQPYG-LDIV 164 (288)
T ss_dssp -CSSSCCCCTTSTTTHHHHHHHHHHTCEEEECSCTT------THHHHHHHHTTTT-CCEE
T ss_pred -cccCCCCCcccHHHHHHHHHHHHCCCeEEEeechh------hHHHHHHHHHHCC-CCEE
Confidence 4442 24556677788777775 7998853221 244555665 678 5444
No 486
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=63.23 E-value=39 Score=31.27 Aligned_cols=132 Identities=15% Similarity=0.257 Sum_probs=76.5
Q ss_pred eEeeecccCCCCCC---CHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCH
Q 018443 60 ITAIKTPYLPDGRF---DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNST 136 (356)
Q Consensus 60 i~al~TPf~~dg~I---D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st 136 (356)
+-+++=|-..|.-. +++.+.+-|+.+.+.|++||++..-|-|+ .+..+-=++|++. ++ ..+|..+=.-..+
T Consensus 92 V~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~dg-~iD~~~~~~Li~~----a~-~l~vTFHRAFD~~ 165 (287)
T 3iwp_A 92 VFVMIRPRGGDFLYSDREIEVMKADIRLAKLYGADGLVFGALTEDG-HIDKELCMSLMAI----CR-PLPVTFHRAFDMV 165 (287)
T ss_dssp EEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTS-CBCHHHHHHHHHH----HT-TSCEEECGGGGGC
T ss_pred eEEEEecCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEeeeCCCC-CcCHHHHHHHHHH----cC-CCcEEEECchhcc
Confidence 34556666555444 46677778888899999999865545443 4566655556653 33 3677766431222
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc
Q 018443 137 REAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ 205 (356)
Q Consensus 137 ~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~ 205 (356)
.+..+..+...++|+|.|+..-- +++..+=++..+++.+. ..+.|- .|-.++++-+.+|.+
T Consensus 166 ~d~~~Ale~Li~lGvdrILTSG~---~~~a~~Gl~~Lk~Lv~~a~~rI~Im-----aGGGV~~~Ni~~l~~ 228 (287)
T 3iwp_A 166 HDPMAALETLLTLGFERVLTSGC---DSSALEGLPLIKRLIEQAKGRIVVM-----PGGGITDRNLQRILE 228 (287)
T ss_dssp SCHHHHHHHHHHHTCSEEEECTT---SSSTTTTHHHHHHHHHHHTTSSEEE-----ECTTCCTTTHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEECCCC---CCChHHhHHHHHHHHHHhCCCCEEE-----ECCCcCHHHHHHHHH
Confidence 23444555666679999998542 33333334455555543 233322 244566777777654
No 487
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=63.15 E-value=44 Score=29.13 Aligned_cols=71 Identities=6% Similarity=-0.069 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHh-CCCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018443 110 HIMLIGHTVNCF-GASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNV 187 (356)
Q Consensus 110 r~~li~~~~~~~-~grvpVi~gvg~~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~ 187 (356)
..++++.+.+.+ .....++......+.+...+..+...+.++||+++.+... ...++.+.+. .|+++.+.
T Consensus 22 ~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~--------~~~~~~l~~~~iPvV~i~~ 93 (276)
T 3jy6_A 22 STELFKGISSILESRGYIGVLFDANADIEREKTLLRAIGSRGFDGLILQSFSN--------PQTVQEILHQQMPVVSVDR 93 (276)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEECTTCHHHHHHHHHHHHTTTCSEEEEESSCC--------HHHHHHHHTTSSCEEEESC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCc--------HHHHHHHHHCCCCEEEEec
Confidence 344444444433 2245566655666777778888888899999999987543 2345556555 79999986
Q ss_pred C
Q 018443 188 P 188 (356)
Q Consensus 188 P 188 (356)
+
T Consensus 94 ~ 94 (276)
T 3jy6_A 94 E 94 (276)
T ss_dssp C
T ss_pred c
Confidence 4
No 488
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=63.05 E-value=71 Score=27.61 Aligned_cols=120 Identities=13% Similarity=0.080 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecC-------CCC-------HHHHHHH
Q 018443 77 AYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTG-------SNS-------TREAIHA 142 (356)
Q Consensus 77 ~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg-------~~s-------t~~ai~l 142 (356)
.+...++.+.+.|.+ +=+.+. ...++.++ -++.+.+..++ .+.++.. +.+ .+...+.
T Consensus 11 ~l~~~l~~~~~~G~~-vEl~~~---~~~~~~~~---~~~~~~~~~~~--~~~~h~~~~~~~l~~~~~~~r~~~~~~~~~~ 81 (254)
T 3ayv_A 11 RAEEALPRLQALGLG-AEVYLD---PALLEEDA---LFQSLRRRFSG--KLSVHLPFWNLDLLSPDPEVRGLTLRRLLFG 81 (254)
T ss_dssp GHHHHHHHHHHHTCE-EEEECC---GGGTTCHH---HHHHHHHHCCS--CEEEECCCTTCCTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCC-EEEecc---ccccCcHH---HHHHHHHHhCC--CeEEecCccCCCCCCCCHHHHHHHHHHHHHH
Confidence 466778888888999 754322 22344332 23444455533 3333321 111 2345566
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCC-------HHHHHHHHHHHHhc-----CCeEEEeCCCCCCCCCCHHHHHHHhc-C-CC
Q 018443 143 TEQGFAVGMHAALHINPYYGKTS-------LEGLISHFDSVLSM-----GPTIIYNVPSRTGQDIPPRVIHTMAQ-S-PN 208 (356)
Q Consensus 143 ar~a~~~Gadavlv~pP~y~~~s-------~~~l~~y~~~va~~-----~PiilYn~P~~tG~~ls~~~l~~La~-~-pn 208 (356)
++.|+++|+..+.+.+.+..... .+.+.+.++.+++. +.+.+-|.+.. +++.+.+|.+ + ||
T Consensus 82 i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~-----~~~~~~~l~~~v~~~ 156 (254)
T 3ayv_A 82 LDRAAELGADRAVFHSGIPHGRTPEEALERALPLAEALGLVVRRARTLGVRLLLENSHEP-----HPEALRPVLEAHAGE 156 (254)
T ss_dssp HHHHHHTTCSEEEEECCCCTTCCHHHHHHTHHHHHHHTHHHHHHHHHHTCEEEEECSSCS-----SGGGTHHHHHHHTTS
T ss_pred HHHHHHhCCCEEEECCCCCcccccccHHHHHHHHHHHHHHHHHHHhhcCCEEEEcCCCCC-----CHHHHHHHHHhcCcC
Confidence 77889999999988766543321 24456666666652 45667776532 4555555542 2 66
Q ss_pred EE
Q 018443 209 LA 210 (356)
Q Consensus 209 iv 210 (356)
+.
T Consensus 157 vg 158 (254)
T 3ayv_A 157 LG 158 (254)
T ss_dssp SE
T ss_pred EE
Confidence 53
No 489
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=63.01 E-value=53 Score=29.69 Aligned_cols=132 Identities=11% Similarity=0.065 Sum_probs=72.1
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEE-e----------cCCCCHHHHHH
Q 018443 73 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG-N----------TGSNSTREAIH 141 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~-g----------vg~~st~~ai~ 141 (356)
-|.+...+.++.+++.+++|+++.+... +.++ +.+.+. ...+||+. + |+..+.+..-.
T Consensus 103 ~~~~~~~~~~~~l~~~~vdgiIi~~~~~-----~~~~---~~~~~~---~~~iPvV~~~~~~~~~~~~~V~~D~~~~~~~ 171 (338)
T 3dbi_A 103 HSAEEERQAIQYLLDLRCDAIMIYPRFL-----SVDE---IDDIID---AHSQPIMVLNRRLRKNSSHSVWCDHKQTSFN 171 (338)
T ss_dssp TSHHHHHHHHHHHHHTTCSEEEECCSSS-----CHHH---HHHHHH---HCSSCEEEESSCCSSSGGGEECBCHHHHHHH
T ss_pred CChHHHHHHHHHHHhCCCCEEEEeCCCC-----ChHH---HHHHHH---cCCCCEEEEcCCCCCCCCCEEEEChHHHHHH
Confidence 4667778899999999999999877532 2222 222222 22466543 2 33445666777
Q ss_pred HHHHHHHcCCCEEEEcCCCCCCC-CHHHHHHHHHHHHhc-CC---eEEEeCCCCCCCCCCHHHHHHHh-cCCCEEEEeec
Q 018443 142 ATEQGFAVGMHAALHINPYYGKT-SLEGLISHFDSVLSM-GP---TIIYNVPSRTGQDIPPRVIHTMA-QSPNLAGVKEC 215 (356)
Q Consensus 142 lar~a~~~Gadavlv~pP~y~~~-s~~~l~~y~~~va~~-~P---iilYn~P~~tG~~ls~~~l~~La-~~pnivGiK~s 215 (356)
.+++..+.|..-+.++....... ..+-...|.+.+.+. .+ ..++.... ...-..+.+.++. +.|.+.+|=-
T Consensus 172 a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~~~~~ai~~- 248 (338)
T 3dbi_A 172 AVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEKLIANGKW--TPASGAEGVEMLLERGAKFSALVA- 248 (338)
T ss_dssp HHHHHHHTTCCSEEEECCCTTCHHHHHHHHHHHHHHHHTTCCCCGGGEECCCS--SHHHHHHHHHHHHHTTCCCSEEEE-
T ss_pred HHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHHHCCCCCCcceEEeCCC--CHHHHHHHHHHHHcCCCCCeEEEE-
Confidence 88888899988776664432222 233344444455544 33 23332110 0011124556665 5666666653
Q ss_pred Cch
Q 018443 216 VGN 218 (356)
Q Consensus 216 ~~d 218 (356)
.+|
T Consensus 249 ~nd 251 (338)
T 3dbi_A 249 SND 251 (338)
T ss_dssp SSH
T ss_pred CCh
Confidence 344
No 490
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=62.88 E-value=69 Score=30.26 Aligned_cols=124 Identities=9% Similarity=0.031 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHCCCCEEEEc-cCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCCC-HHHHHHHHHHHHHcCCC
Q 018443 76 EAYDDLVNMQIVNGAEGMIVG-GTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNS-TREAIHATEQGFAVGMH 152 (356)
Q Consensus 76 ~~l~~~v~~li~~Gv~Gl~v~-GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gv-g~~s-t~~ai~lar~a~~~Gad 152 (356)
+.+.+.++..++.|.+.+=+- |..| -+.++=.+.++.+.+.++.++++++=+ ++-+ .++++++++..++.|++
T Consensus 148 e~~~~~a~~~~~~Gf~~iKlk~g~~g----~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~d~~~A~~~~~~l~~~~i~ 223 (374)
T 3sjn_A 148 EDNVAIVQGLKDQGFSSIKFGGGVMG----DDPDTDYAIVKAVREAAGPEMEVQIDLASKWHTCGHSAMMAKRLEEFNLN 223 (374)
T ss_dssp GGGHHHHHHHHTTTCSEEEEECTTTT----SCHHHHHHHHHHHHHHHCSSSEEEEECTTTTCSHHHHHHHHHHSGGGCCS
T ss_pred HHHHHHHHHHHHcCCCEEEeccCCCC----CCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHHHHhhhcCce
Confidence 778888888899999998553 3222 146777888889999988899998866 4457 89999999999999987
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCEEEEeecC
Q 018443 153 AALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV 216 (356)
Q Consensus 153 avlv~pP~y~~~s~~~l~~y~~~va~~--~PiilYn~P~~tG~~ls~~~l~~La~--~pnivGiK~s~ 216 (356)
.+= -|.. ..+ .+.+++|.+. .||+.=. ...+++.+.++.+ .-.++-+|-+-
T Consensus 224 ~iE--qP~~-~~~----~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~l~~~~~d~v~~k~~~ 278 (374)
T 3sjn_A 224 WIE--EPVL-ADS----LISYEKLSRQVSQKIAGGE------SLTTRYEFQEFITKSNADIVQPDITR 278 (374)
T ss_dssp EEE--CSSC-TTC----HHHHHHHHHHCSSEEEECT------TCCHHHHHHHHHHHHCCSEECCBTTT
T ss_pred EEE--CCCC-ccc----HHHHHHHHhhCCCCEEeCC------CcCCHHHHHHHHHcCCCCEEEeCccc
Confidence 653 3432 112 4556777776 4665432 2345777888773 57888898765
No 491
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=62.74 E-value=38 Score=31.24 Aligned_cols=81 Identities=10% Similarity=0.100 Sum_probs=47.7
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHc
Q 018443 70 DGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAV 149 (356)
Q Consensus 70 dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~ 149 (356)
...++.+.+.+.++.+.+.|+..|.+.| ||-..-. +-.++++.+.+. .+...+-+.+.+....+ .++...++
T Consensus 47 ~~~ls~e~i~~~i~~~~~~g~~~i~~tG--GEPll~~--~l~~li~~~~~~-~~~~~i~i~TNG~ll~~---~~~~L~~~ 118 (340)
T 1tv8_A 47 NELLTFDEMARIAKVYAELGVKKIRITG--GEPLMRR--DLDVLIAKLNQI-DGIEDIGLTTNGLLLKK---HGQKLYDA 118 (340)
T ss_dssp GGSCCHHHHHHHHHHHHHTTCCEEEEES--SCGGGST--THHHHHHHHTTC-TTCCEEEEEECSTTHHH---HHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHCCCCEEEEeC--CCccchh--hHHHHHHHHHhC-CCCCeEEEEeCccchHH---HHHHHHHC
Confidence 3457888888888888888888887766 7854432 233444443322 11114444554444433 45555667
Q ss_pred CCCEEEEcC
Q 018443 150 GMHAALHIN 158 (356)
Q Consensus 150 Gadavlv~p 158 (356)
|.+.+.+..
T Consensus 119 g~~~v~iSl 127 (340)
T 1tv8_A 119 GLRRINVSL 127 (340)
T ss_dssp TCCEEEEEC
T ss_pred CCCEEEEec
Confidence 777776654
No 492
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=62.50 E-value=53 Score=30.34 Aligned_cols=21 Identities=10% Similarity=0.067 Sum_probs=9.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEE
Q 018443 73 FDLEAYDDLVNMQIVNGAEGM 93 (356)
Q Consensus 73 ID~~~l~~~v~~li~~Gv~Gl 93 (356)
++.+.+.+..+-..+.|+|-|
T Consensus 185 Lt~eei~~A~~ia~eaGADfV 205 (288)
T 3oa3_A 185 LTADEIIAGCVLSSLAGADYV 205 (288)
T ss_dssp CCHHHHHHHHHHHHHTTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEE
Confidence 444444444444445555544
No 493
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=62.37 E-value=14 Score=36.46 Aligned_cols=119 Identities=13% Similarity=0.075 Sum_probs=69.2
Q ss_pred ccCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEcc-Ccccc-cCCCH-HHHHHHHHHHHHHhC------CCc
Q 018443 55 KALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGG-TTGEG-QLMSW-DEHIMLIGHTVNCFG------ASV 125 (356)
Q Consensus 55 ~~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~G-stGE~-~~Lt~-eEr~~li~~~~~~~~------grv 125 (356)
...||+-..+=-|.+.| .|.+...++++.+++.|++-|=|+| ||--+ ...+. ||..+++..+..... -++
T Consensus 192 ~vMGIlNvTPDSFsDgg-~~~~~al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~v 270 (442)
T 3mcm_A 192 IRMGIVNLSNQSFSDGN-FDDNQRKLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANLIYKP 270 (442)
T ss_dssp EEEEEEECSSCC-CCCS-SCCCHHHHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTCSSCC
T ss_pred eEEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCC
Confidence 35666665444487777 9999999999999999999998887 44333 23444 566666443322221 145
Q ss_pred EEEEecCCCCHHHHHHHHHHHHH--cCCCE-EEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018443 126 KVIGNTGSNSTREAIHATEQGFA--VGMHA-ALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNV 187 (356)
Q Consensus 126 pVi~gvg~~st~~ai~lar~a~~--~Gada-vlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~ 187 (356)
||-+=+ ...+ -+++|-+ +|++- |--+. . ..++ +-+..+++. .|+++-+.
T Consensus 271 pISIDT--~~~~----VaeaAL~~~aGa~i~INDVs---g-~~d~---~m~~v~a~~g~~vVlMh~ 323 (442)
T 3mcm_A 271 LVSIDT--RKLE----VMQKILAKHHDIIWMINDVE---C-NNIE---QKAQLIAKYNKKYVIIHN 323 (442)
T ss_dssp EEEEEC--CCHH----HHHHHHHHHGGGCCEEEECC---C-TTHH---HHHHHHHHHTCEEEEECC
T ss_pred eEEEeC--CCHH----HHHHHHhhCCCCCEEEEcCC---C-CCCh---HHHHHHHHhCCeEEEECC
Confidence 554443 3333 2344455 78865 43332 2 2233 345556665 79988764
No 494
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=62.36 E-value=82 Score=27.67 Aligned_cols=188 Identities=10% Similarity=-0.026 Sum_probs=103.3
Q ss_pred cCceeEeeecccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCC
Q 018443 56 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 135 (356)
Q Consensus 56 ~~Gvi~al~TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~s 135 (356)
-.++++.+-. .|.+.+...++.+++.|++-+=+--. +.+. .+.++...+..+ ++.+-+|+ .-
T Consensus 16 ~~~ii~vir~-------~~~~~~~~~~~al~~gGv~~iel~~k-----~~~~---~~~i~~l~~~~~-~l~vgaGt--vl 77 (224)
T 1vhc_A 16 ELKIVPVIAL-------DNADDILPLADTLAKNGLSVAEITFR-----SEAA---ADAIRLLRANRP-DFLIAAGT--VL 77 (224)
T ss_dssp HHCEEEEECC-------SSGGGHHHHHHHHHHTTCCEEEEETT-----STTH---HHHHHHHHHHCT-TCEEEEES--CC
T ss_pred HCCeEEEEeC-------CCHHHHHHHHHHHHHcCCCEEEEecc-----CchH---HHHHHHHHHhCc-CcEEeeCc--Ee
Confidence 3556665543 45566788999999999998865422 1222 345565555554 44444454 32
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHHHhcC-CCEEEEee
Q 018443 136 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHTMAQS-PNLAGVKE 214 (356)
Q Consensus 136 t~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~~PiilYn~P~~tG~~ls~~~l~~La~~-pnivGiK~ 214 (356)
+. +.++.|.++|||++.+ |. ++.++.+.-++ -..|+++ | ..+++.+.+..+. ...+++ .
T Consensus 78 ~~---d~~~~A~~aGAd~v~~--p~----~d~~v~~~ar~--~g~~~i~-------G-v~t~~e~~~A~~~Gad~vk~-F 137 (224)
T 1vhc_A 78 TA---EQVVLAKSSGADFVVT--PG----LNPKIVKLCQD--LNFPITP-------G-VNNPMAIEIALEMGISAVKF-F 137 (224)
T ss_dssp SH---HHHHHHHHHTCSEEEC--SS----CCHHHHHHHHH--TTCCEEC-------E-ECSHHHHHHHHHTTCCEEEE-T
T ss_pred eH---HHHHHHHHCCCCEEEE--CC----CCHHHHHHHHH--hCCCEEe-------c-cCCHHHHHHHHHCCCCEEEE-e
Confidence 22 6778888999999942 32 34555555444 1135443 4 2456666554443 455555 3
Q ss_pred cCc----hhhHhhhhC--CCeEE--EecCcchhHhHHHHc-CCceeecccccccHHHHHHHHHcCCcHHHHHHHHHHHHH
Q 018443 215 CVG----NDRVEHYTG--NGIVV--WSGNDDQCHDARWNH-GATGVISVTSNLVPGMMRELMFGGKNPSLNTKLFPLIEW 285 (356)
Q Consensus 215 s~~----d~~i~~~~~--~~~~v--~~G~d~~~l~~~l~~-Ga~G~is~~~n~~P~~~~~l~~ag~a~~l~~~l~~l~~~ 285 (356)
... ...++++.. +++.+ ..|-+..-+..++.. |++|+. .+.+++... .++++..++.++...+.+.
T Consensus 138 pa~~~gG~~~lk~l~~~~~~ipvvaiGGI~~~N~~~~l~agga~~v~--gS~i~~~~~---i~~~~~~~i~~~a~~~~~~ 212 (224)
T 1vhc_A 138 PAEASGGVKMIKALLGPYAQLQIMPTGGIGLHNIRDYLAIPNIVACG--GSWFVEKKL---IQSNNWDEIGRLVREVIDI 212 (224)
T ss_dssp TTTTTTHHHHHHHHHTTTTTCEEEEBSSCCTTTHHHHHTSTTBCCEE--ECGGGCHHH---HHTTCHHHHHHHHHHHHHH
T ss_pred eCccccCHHHHHHHHhhCCCCeEEEECCcCHHHHHHHHhcCCCEEEE--EchhcCcch---hccCCHHHHHHHHHHHHHH
Confidence 311 122333221 24444 445544444556777 666655 455655432 2566666666666666655
Q ss_pred H
Q 018443 286 L 286 (356)
Q Consensus 286 ~ 286 (356)
.
T Consensus 213 ~ 213 (224)
T 1vhc_A 213 I 213 (224)
T ss_dssp H
T ss_pred H
Confidence 4
No 495
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=62.34 E-value=23 Score=30.49 Aligned_cols=81 Identities=9% Similarity=0.131 Sum_probs=44.8
Q ss_pred CCCCEEEEc----cCcccccCCCHHHHHHHHHHHHHHhCCCcEEEE--ecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCC
Q 018443 88 NGAEGMIVG----GTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG--NTGSNSTREAIHATEQGFAVGMHAALHINPYY 161 (356)
Q Consensus 88 ~Gv~Gl~v~----GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~--gvg~~st~~ai~lar~a~~~Gadavlv~pP~y 161 (356)
.+++.+++. |.+|..+.-+.-++.+.++......+.+.|+++ |+... -++.+.++|+|++.+..+.|
T Consensus 130 ~~~d~vl~~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~~~-------~~~~~~~~Gad~vvvGsai~ 202 (220)
T 2fli_A 130 DLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVDNK-------TIRACYEAGANVFVAGSYLF 202 (220)
T ss_dssp TTCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCCTT-------THHHHHHHTCCEEEESHHHH
T ss_pred hhCCEEEEEEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEEECcCCHH-------HHHHHHHcCCCEEEEChHHh
Confidence 568877542 344442222222444444444443333567654 45432 22334455999999999888
Q ss_pred CCCCHHHHHHHHHH
Q 018443 162 GKTSLEGLISHFDS 175 (356)
Q Consensus 162 ~~~s~~~l~~y~~~ 175 (356)
...+.++..+-+++
T Consensus 203 ~~~d~~~a~~~~~~ 216 (220)
T 2fli_A 203 KASDLVSQVQTLRT 216 (220)
T ss_dssp TSSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 77676665555544
No 496
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=62.24 E-value=72 Score=30.29 Aligned_cols=118 Identities=8% Similarity=-0.011 Sum_probs=69.3
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHH
Q 018443 65 TPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATE 144 (356)
Q Consensus 65 TPf~~dg~ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar 144 (356)
|-+...+.-+.+.+....+..+..|+..++..+.......-+.+.-....+.+.+...-+.-..+++.....++..+
T Consensus 66 ~H~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--- 142 (448)
T 3hm7_A 66 VHFNEPGRTEWEGFASGSKSLAAGGVTTYFDMPLNSNPPTITREELDKKRQLANEKSLVDYRFWGGLVPGNIDHLQD--- 142 (448)
T ss_dssp ECCCTTTSGGGCCSHHHHHHHHTTTEEEEEECSSSSSSCSCSHHHHHHHHTHHHHHCSSEEEEEEECCTTCGGGHHH---
T ss_pred eccCCCCCCcHhHHHHHHHHHHhCCEEEEEeCCCCCCCCCChHHHHHHHHHHhccCCeeEEEEEEEecccCHHHHHH---
Confidence 44443333334556777888899999999987722233334555555555544443222444566665544433333
Q ss_pred HHHHcCCCEEEEcCCCCC-----CCCHHHHHHHHHHHHhc-CCeEEEe
Q 018443 145 QGFAVGMHAALHINPYYG-----KTSLEGLISHFDSVLSM-GPTIIYN 186 (356)
Q Consensus 145 ~a~~~Gadavlv~pP~y~-----~~s~~~l~~y~~~va~~-~PiilYn 186 (356)
..+.|+.++-+...|+. ..+++.+.+.++...+. .|++++.
T Consensus 143 -l~~~g~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~a~~~g~~v~vH~ 189 (448)
T 3hm7_A 143 -LHDGGVIGFKAFMSECGTDDFQFSHDETLLKGMKKIAALGSILAVHA 189 (448)
T ss_dssp -HHHTTCSEEEEESSSCSSSSSCCCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred -HHHcCCCEEEEeeccccCCccCcCCHHHHHHHHHHHHhcCCEEEEEe
Confidence 33478888865544432 23677777777776665 7998885
No 497
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=62.23 E-value=70 Score=28.06 Aligned_cols=81 Identities=14% Similarity=-0.098 Sum_probs=45.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcC--C
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVG--M 151 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~G--a 151 (356)
|+++-...+++|++.|..-|.+.+...+ .-+..+|.+-+..+.+..+-+ +.++-.+..+.+++.+.++...+.+ .
T Consensus 122 ~~~~~~~a~~~L~~~G~~~I~~i~~~~~--~~~~~~R~~Gf~~~l~~~g~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 198 (293)
T 2iks_A 122 DQDDAEMLAEELRKFPAETVLYLGALPE--LSVSFLREQGFRTAWKDDPRE-VHFLYANSYEREAAAQLFEKWLETHPMP 198 (293)
T ss_dssp HHHHHHHHHHHHHTSCCSSEEEEEECTT--SHHHHHHHHHHHHHHTTCCCC-EEEEEESSSCHHHHHHHHHHHTTTSCCC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEecCcc--cccHHHHHHHHHHHHHHcCCC-ccEEEcCCCChhhHHHHHHHHHhcCCCC
Confidence 3556677788888888665544432211 224567777776666554332 2222234456666666666654443 6
Q ss_pred CEEEEc
Q 018443 152 HAALHI 157 (356)
Q Consensus 152 davlv~ 157 (356)
|++++.
T Consensus 199 ~ai~~~ 204 (293)
T 2iks_A 199 QALFTT 204 (293)
T ss_dssp SEEEES
T ss_pred CEEEEC
Confidence 777764
No 498
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=62.20 E-value=26 Score=31.12 Aligned_cols=71 Identities=10% Similarity=0.022 Sum_probs=45.6
Q ss_pred HHHHHHHHHhCCCcEEEEecCC--CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCC
Q 018443 112 MLIGHTVNCFGASVKVIGNTGS--NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVP 188 (356)
Q Consensus 112 ~li~~~~~~~~grvpVi~gvg~--~st~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~va~~-~PiilYn~P 188 (356)
+-++..++..+ ..++..... .+.++..+..+.+.+.++||+++.+... +.+...++.+.+. .|++.+|.+
T Consensus 23 ~gi~~~a~~~g--~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~-----~~~~~~~~~~~~~giPvV~~~~~ 95 (297)
T 3rot_A 23 QGAKKAAEELK--VDLQILAPPGANDVPKQVQFIESALATYPSGIATTIPSD-----TAFSKSLQRANKLNIPVIAVDTR 95 (297)
T ss_dssp HHHHHHHHHHT--CEEEEECCSSSCCHHHHHHHHHHHHHTCCSEEEECCCCS-----STTHHHHHHHHHHTCCEEEESCC
T ss_pred HHHHHHHHHhC--cEEEEECCCCcCCHHHHHHHHHHHHHcCCCEEEEeCCCH-----HHHHHHHHHHHHCCCCEEEEcCC
Confidence 33444444433 445444433 4788888999999999999999876532 2223345566555 799999865
Q ss_pred C
Q 018443 189 S 189 (356)
Q Consensus 189 ~ 189 (356)
.
T Consensus 96 ~ 96 (297)
T 3rot_A 96 P 96 (297)
T ss_dssp C
T ss_pred C
Confidence 3
No 499
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=62.18 E-value=12 Score=32.78 Aligned_cols=77 Identities=6% Similarity=-0.047 Sum_probs=47.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcccc-cCCCHHHHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHHcCCC
Q 018443 74 DLEAYDDLVNMQIVNGAEGMIVGGTTGEG-QLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMH 152 (356)
Q Consensus 74 D~~~l~~~v~~li~~Gv~Gl~v~GstGE~-~~Lt~eEr~~li~~~~~~~~grvpVi~gvg~~st~~ai~lar~a~~~Gad 152 (356)
|.+.+.+.++.+.+.|++.+=+--.-|.| ..++ .-.++++.+.+.+ +.|+.+++--++.+ +.++.+.++|+|
T Consensus 21 d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~--~~~~~i~~l~~~~--~~~~~v~l~vnd~~---~~v~~~~~~Gad 93 (230)
T 1rpx_A 21 NFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNIT--IGPLVVDSLRPIT--DLPLDVHLMIVEPD---QRVPDFIKAGAD 93 (230)
T ss_dssp CGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBC--CCHHHHHHHGGGC--CSCEEEEEESSSHH---HHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeeccCCcccccc--cCHHHHHHHHhcc--CCcEEEEEEecCHH---HHHHHHHHcCCC
Confidence 34578888999999999976543223333 2222 1235555555444 35777776656544 466667789999
Q ss_pred EEEEc
Q 018443 153 AALHI 157 (356)
Q Consensus 153 avlv~ 157 (356)
++.+.
T Consensus 94 ~v~vh 98 (230)
T 1rpx_A 94 IVSVH 98 (230)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99654
No 500
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=62.06 E-value=20 Score=30.87 Aligned_cols=101 Identities=11% Similarity=0.105 Sum_probs=56.2
Q ss_pred ceeEeeecccCCCCC-CCHHHHHHHHHHHHHCCCCEEEEccCcccccCCCHHHHHHHHHHHHHHhCCCcEE-EEecCCCC
Q 018443 58 RLITAIKTPYLPDGR-FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKV-IGNTGSNS 135 (356)
Q Consensus 58 Gvi~al~TPf~~dg~-ID~~~l~~~v~~li~~Gv~Gl~v~GstGE~~~Lt~eEr~~li~~~~~~~~grvpV-i~gvg~~s 135 (356)
|+..-.-||...-.+ + .+.+...+....+.|.+|+.+..++ .++ .+ .+.+..+.+..+ ..|++...
T Consensus 101 gv~vl~~t~~~~~~~~~-~~~v~~~~~~a~~~G~~G~~~~~~~-------~~~-i~---~lr~~~~~~~~iv~gGI~~~g 168 (208)
T 2czd_A 101 EIIMVVEMSHPGALEFI-NPLTDRFIEVANEIEPFGVIAPGTR-------PER-IG---YIRDRLKEGIKILAPGIGAQG 168 (208)
T ss_dssp EEEEECCCCSGGGGTTT-GGGHHHHHHHHHHHCCSEEECCCSS-------THH-HH---HHHHHSCTTCEEEECCCCSST
T ss_pred CcEEEEecCCcchhhHH-HHHHHHHHHHHHHhCCcEEEECCCC-------hHH-HH---HHHHhCCCCeEEEECCCCCCC
Confidence 655444455321101 1 4455566666678899999765442 222 22 223333433333 33676542
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHH
Q 018443 136 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDS 175 (356)
Q Consensus 136 t~~ai~lar~a~~~Gadavlv~pP~y~~~s~~~l~~y~~~ 175 (356)
.. ++.+.++|+|.+.+..+.+...+..+..+-+++
T Consensus 169 ~~-----~~~~~~aGad~vvvGr~I~~a~dp~~~~~~l~~ 203 (208)
T 2czd_A 169 GK-----AKDAVKAGADYIIVGRAIYNAPNPREAAKAIYD 203 (208)
T ss_dssp TH-----HHHHHHHTCSEEEECHHHHTSSSHHHHHHHHHH
T ss_pred CC-----HHHHHHcCCCEEEEChHHhcCCCHHHHHHHHHH
Confidence 11 555667899999999887776666665555554
Done!