Query 018445
Match_columns 355
No_of_seqs 147 out of 1403
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 15:23:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018445.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018445hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4had_A Probable oxidoreductase 100.0 1.4E-61 4.7E-66 446.0 31.8 320 3-352 24-350 (350)
2 4h3v_A Oxidoreductase domain p 100.0 4.3E-61 1.5E-65 449.2 32.9 331 1-354 4-390 (390)
3 4gqa_A NAD binding oxidoreduct 100.0 2.2E-60 7.5E-65 447.0 32.5 329 2-354 26-411 (412)
4 4fb5_A Probable oxidoreductase 100.0 1.8E-58 6E-63 432.0 32.3 328 2-353 25-393 (393)
5 1zh8_A Oxidoreductase; TM0312, 100.0 1.5E-57 5.1E-62 416.7 34.2 317 2-355 18-339 (340)
6 3db2_A Putative NADPH-dependen 100.0 2.8E-57 9.5E-62 417.6 34.0 326 1-354 4-351 (354)
7 3kux_A Putative oxidoreductase 100.0 8.7E-57 3E-61 413.8 36.6 322 2-354 7-350 (352)
8 3ip3_A Oxidoreductase, putativ 100.0 7.7E-58 2.6E-62 418.4 28.3 316 1-353 1-330 (337)
9 3fhl_A Putative oxidoreductase 100.0 2.1E-57 7.2E-62 419.4 30.7 322 3-354 6-355 (362)
10 3i23_A Oxidoreductase, GFO/IDH 100.0 6.3E-57 2.2E-61 414.2 32.6 321 1-350 1-345 (349)
11 3e18_A Oxidoreductase; dehydro 100.0 2E-56 7E-61 411.9 34.0 317 3-354 6-352 (359)
12 3gdo_A Uncharacterized oxidore 100.0 2.1E-56 7.2E-61 411.9 33.3 321 3-354 6-350 (358)
13 3ezy_A Dehydrogenase; structur 100.0 2.2E-56 7.5E-61 410.0 32.6 320 1-354 1-333 (344)
14 3e82_A Putative oxidoreductase 100.0 3.9E-56 1.3E-60 410.8 33.8 321 2-353 7-346 (364)
15 3mz0_A Inositol 2-dehydrogenas 100.0 1.5E-56 5.3E-61 411.1 30.9 314 1-353 1-328 (344)
16 3dty_A Oxidoreductase, GFO/IDH 100.0 8.6E-56 3E-60 413.4 35.1 330 2-353 12-390 (398)
17 3e9m_A Oxidoreductase, GFO/IDH 100.0 1.3E-55 4.5E-60 402.3 35.0 316 3-351 6-326 (330)
18 3ec7_A Putative dehydrogenase; 100.0 4.6E-56 1.6E-60 409.3 32.0 314 1-353 22-348 (357)
19 3q2i_A Dehydrogenase; rossmann 100.0 2.3E-56 7.8E-61 411.5 29.7 323 2-353 13-351 (354)
20 3rc1_A Sugar 3-ketoreductase; 100.0 4.7E-56 1.6E-60 408.2 31.4 313 2-343 27-344 (350)
21 3v5n_A Oxidoreductase; structu 100.0 1.6E-55 5.5E-60 413.4 35.5 330 2-352 37-417 (417)
22 4hkt_A Inositol 2-dehydrogenas 100.0 9.7E-56 3.3E-60 403.8 32.9 316 1-352 2-330 (331)
23 3oqb_A Oxidoreductase; structu 100.0 1.9E-55 6.4E-60 409.8 34.3 331 2-355 6-382 (383)
24 3ohs_X Trans-1,2-dihydrobenzen 100.0 2.2E-55 7.6E-60 401.8 33.5 311 1-343 1-325 (334)
25 3evn_A Oxidoreductase, GFO/IDH 100.0 2.6E-55 8.8E-60 400.4 33.5 313 3-348 6-323 (329)
26 3u3x_A Oxidoreductase; structu 100.0 1.7E-55 5.8E-60 405.9 32.2 318 2-348 26-358 (361)
27 3f4l_A Putative oxidoreductase 100.0 9.4E-56 3.2E-60 405.9 29.1 320 1-350 1-342 (345)
28 2glx_A 1,5-anhydro-D-fructose 100.0 1.2E-54 4E-59 397.0 34.7 324 3-354 1-330 (332)
29 3euw_A MYO-inositol dehydrogen 100.0 1.2E-54 4.2E-59 398.6 31.5 317 2-354 4-334 (344)
30 1h6d_A Precursor form of gluco 100.0 2.4E-54 8.1E-59 406.9 33.7 328 2-355 83-426 (433)
31 3moi_A Probable dehydrogenase; 100.0 8.2E-55 2.8E-59 405.4 26.5 326 1-351 1-386 (387)
32 3m2t_A Probable dehydrogenase; 100.0 3.3E-55 1.1E-59 403.9 23.0 312 3-351 6-337 (359)
33 3btv_A Galactose/lactose metab 100.0 5.5E-53 1.9E-57 398.4 35.6 328 2-354 20-432 (438)
34 2p2s_A Putative oxidoreductase 100.0 4E-53 1.4E-57 387.2 32.8 318 2-347 4-335 (336)
35 2nvw_A Galactose/lactose metab 100.0 1.7E-52 5.9E-57 397.9 34.5 337 2-354 39-476 (479)
36 3cea_A MYO-inositol 2-dehydrog 100.0 1.2E-51 4E-56 379.3 32.4 319 2-353 8-345 (346)
37 3uuw_A Putative oxidoreductase 100.0 5.1E-51 1.7E-55 368.9 29.6 296 2-343 6-307 (308)
38 1ydw_A AX110P-like protein; st 100.0 8.3E-52 2.9E-56 382.2 22.8 328 2-353 6-360 (362)
39 2ho3_A Oxidoreductase, GFO/IDH 100.0 1.7E-50 5.9E-55 368.1 29.2 309 2-343 1-317 (325)
40 2ixa_A Alpha-N-acetylgalactosa 100.0 2.2E-51 7.5E-56 388.6 17.3 333 2-355 20-426 (444)
41 3c1a_A Putative oxidoreductase 100.0 5.6E-50 1.9E-54 363.1 25.6 296 2-339 10-314 (315)
42 3oa2_A WBPB; oxidoreductase, s 100.0 1.4E-49 4.8E-54 359.8 20.8 284 2-343 3-300 (318)
43 4ew6_A D-galactose-1-dehydroge 100.0 7.5E-49 2.6E-53 357.1 25.6 276 2-313 25-302 (330)
44 1xea_A Oxidoreductase, GFO/IDH 100.0 1.6E-48 5.6E-53 354.7 25.6 302 1-347 1-309 (323)
45 1tlt_A Putative oxidoreductase 100.0 4.5E-47 1.5E-51 344.7 27.0 298 3-349 6-311 (319)
46 3o9z_A Lipopolysaccaride biosy 100.0 2.5E-47 8.4E-52 344.2 19.2 285 2-343 3-298 (312)
47 1lc0_A Biliverdin reductase A; 100.0 4.7E-40 1.6E-44 294.3 21.4 280 2-347 7-293 (294)
48 4gmf_A Yersiniabactin biosynth 100.0 2.9E-31 9.9E-36 243.2 28.7 220 2-270 7-243 (372)
49 3bio_A Oxidoreductase, GFO/IDH 99.9 8.6E-29 3E-33 222.0 -3.3 138 2-162 9-149 (304)
50 3mtj_A Homoserine dehydrogenas 99.9 4.6E-23 1.6E-27 191.3 7.3 144 2-164 10-163 (444)
51 3upl_A Oxidoreductase; rossman 99.8 4.9E-21 1.7E-25 177.0 10.5 149 2-165 23-191 (446)
52 3do5_A HOM, homoserine dehydro 99.8 2.1E-21 7.1E-26 174.4 3.8 148 3-167 3-171 (327)
53 1f06_A MESO-diaminopimelate D- 99.8 3.4E-20 1.1E-24 167.3 8.5 129 2-154 3-132 (320)
54 3a06_A 1-deoxy-D-xylulose 5-ph 99.8 1.6E-18 5.4E-23 153.8 13.8 213 1-241 1-247 (376)
55 3c8m_A Homoserine dehydrogenas 99.8 8.2E-20 2.8E-24 164.9 5.2 149 2-166 6-176 (331)
56 2dc1_A L-aspartate dehydrogena 99.7 1.5E-18 5.1E-23 150.0 6.6 111 3-140 1-112 (236)
57 2ejw_A HDH, homoserine dehydro 99.7 5.4E-19 1.8E-23 158.7 2.3 188 1-215 2-217 (332)
58 1r0k_A 1-deoxy-D-xylulose 5-ph 99.7 3.7E-17 1.3E-21 148.1 14.0 213 3-241 5-259 (388)
59 1ebf_A Homoserine dehydrogenas 99.7 2.5E-18 8.6E-23 156.4 6.2 147 2-166 4-173 (358)
60 3ing_A Homoserine dehydrogenas 99.7 5.3E-17 1.8E-21 145.4 9.2 155 1-167 3-173 (325)
61 1nvm_B Acetaldehyde dehydrogen 99.6 2.1E-16 7.2E-21 141.2 7.2 98 2-108 4-108 (312)
62 2czc_A Glyceraldehyde-3-phosph 99.6 5.8E-16 2E-20 140.2 9.1 101 1-107 1-113 (334)
63 1dih_A Dihydrodipicolinate red 99.5 5.6E-14 1.9E-18 123.1 9.7 148 3-164 6-159 (273)
64 2dt5_A AT-rich DNA-binding pro 99.4 1.2E-14 4.2E-19 121.9 1.4 100 2-112 80-180 (211)
65 1ff9_A Saccharopine reductase; 99.3 9E-13 3.1E-17 123.9 7.1 192 1-215 1-202 (450)
66 2nu8_A Succinyl-COA ligase [AD 99.3 1.2E-11 4E-16 109.4 13.2 116 2-139 7-123 (288)
67 2vt3_A REX, redox-sensing tran 99.3 5.8E-13 2E-17 111.9 0.5 101 2-113 85-186 (215)
68 2z2v_A Hypothetical protein PH 99.2 1.5E-11 5.1E-16 112.4 8.9 143 2-167 16-161 (365)
69 3ijp_A DHPR, dihydrodipicolina 99.2 2.9E-10 9.9E-15 99.4 15.4 145 1-163 20-174 (288)
70 4f3y_A DHPR, dihydrodipicolina 99.2 2.1E-10 7.1E-15 100.0 14.1 135 1-154 5-143 (272)
71 4ina_A Saccharopine dehydrogen 99.2 2.7E-10 9.2E-15 105.8 13.4 153 3-165 2-169 (405)
72 1p9l_A Dihydrodipicolinate red 99.2 6E-10 2.1E-14 95.6 14.5 117 3-154 1-118 (245)
73 1u8f_O GAPDH, glyceraldehyde-3 99.2 5E-11 1.7E-15 107.3 8.2 103 1-105 2-124 (335)
74 3qy9_A DHPR, dihydrodipicolina 99.1 1.2E-10 4.2E-15 99.7 9.3 130 1-164 1-135 (243)
75 2ahr_A Putative pyrroline carb 99.1 1.5E-10 5.2E-15 101.1 8.9 100 2-117 3-102 (259)
76 3e5r_O PP38, glyceraldehyde-3- 99.1 1.3E-10 4.6E-15 104.4 8.1 104 1-106 2-127 (337)
77 1cf2_P Protein (glyceraldehyde 99.1 2.7E-10 9.1E-15 102.8 8.9 100 3-106 2-111 (337)
78 3abi_A Putative uncharacterize 99.0 1.2E-09 4.2E-14 100.2 10.6 143 2-167 16-161 (365)
79 2yyy_A Glyceraldehyde-3-phosph 98.9 1.8E-09 6.1E-14 97.4 7.0 102 1-106 1-115 (343)
80 1b7g_O Protein (glyceraldehyde 98.8 7.4E-09 2.5E-13 93.5 8.4 92 3-103 2-107 (340)
81 2axq_A Saccharopine dehydrogen 98.8 7.5E-08 2.6E-12 90.6 14.7 145 3-166 24-176 (467)
82 3ic5_A Putative saccharopine d 98.7 4.9E-08 1.7E-12 73.9 8.8 109 1-123 4-116 (118)
83 1omo_A Alanine dehydrogenase; 98.7 5.7E-09 2E-13 93.7 2.9 102 3-114 126-227 (322)
84 1y81_A Conserved hypothetical 98.7 3.5E-08 1.2E-12 77.0 6.5 102 2-133 14-119 (138)
85 2yv1_A Succinyl-COA ligase [AD 98.6 3.4E-08 1.2E-12 87.3 6.6 106 3-123 14-120 (294)
86 3keo_A Redox-sensing transcrip 98.6 2E-08 6.7E-13 83.7 4.1 99 3-109 85-185 (212)
87 3pef_A 6-phosphogluconate dehy 98.6 1.9E-07 6.4E-12 82.6 9.2 104 2-122 1-111 (287)
88 1vpd_A Tartronate semialdehyde 98.6 2.7E-07 9.3E-12 82.0 10.2 105 1-122 4-115 (299)
89 1oi7_A Succinyl-COA synthetase 98.5 1.3E-07 4.5E-12 83.2 7.7 107 2-123 7-114 (288)
90 2d59_A Hypothetical protein PH 98.5 1.2E-07 4E-12 74.7 6.4 102 2-133 22-127 (144)
91 1x7d_A Ornithine cyclodeaminas 98.5 6.9E-08 2.4E-12 87.5 3.7 104 3-112 130-234 (350)
92 3d1l_A Putative NADP oxidoredu 98.5 1.8E-07 6.1E-12 81.8 6.2 80 3-95 11-90 (266)
93 2duw_A Putative COA-binding pr 98.4 6.4E-08 2.2E-12 76.3 2.6 104 2-134 13-121 (145)
94 3cky_A 2-hydroxymethyl glutara 98.4 7.1E-07 2.4E-11 79.3 9.7 104 2-122 4-114 (301)
95 2ep5_A 350AA long hypothetical 98.4 1.7E-07 6E-12 85.0 5.6 93 2-103 4-107 (350)
96 3oj0_A Glutr, glutamyl-tRNA re 98.4 1.1E-07 3.8E-12 74.9 3.7 87 2-101 21-107 (144)
97 2i76_A Hypothetical protein; N 98.4 4.1E-08 1.4E-12 86.3 1.0 79 1-94 1-79 (276)
98 2yv2_A Succinyl-COA synthetase 98.4 6.8E-07 2.3E-11 79.0 8.7 106 2-123 13-121 (297)
99 2gf2_A Hibadh, 3-hydroxyisobut 98.4 5.5E-07 1.9E-11 79.9 8.2 103 3-122 1-110 (296)
100 1ys4_A Aspartate-semialdehyde 98.4 2E-07 6.7E-12 84.8 4.9 99 1-103 7-113 (354)
101 3obb_A Probable 3-hydroxyisobu 98.4 1.3E-06 4.4E-11 77.5 9.8 109 4-135 5-120 (300)
102 4gbj_A 6-phosphogluconate dehy 98.4 6.4E-07 2.2E-11 79.4 7.2 115 1-138 4-123 (297)
103 4huj_A Uncharacterized protein 98.3 5.7E-07 2E-11 76.2 6.1 91 3-106 24-116 (220)
104 4dll_A 2-hydroxy-3-oxopropiona 98.3 1.7E-06 5.9E-11 77.6 9.5 104 2-122 31-140 (320)
105 1i36_A Conserved hypothetical 98.3 2E-06 6.8E-11 74.9 9.6 102 3-122 1-104 (264)
106 3tri_A Pyrroline-5-carboxylate 98.3 1.4E-06 4.7E-11 76.6 8.5 101 2-113 3-106 (280)
107 3gt0_A Pyrroline-5-carboxylate 98.3 6.9E-07 2.4E-11 77.1 6.5 103 1-115 1-107 (247)
108 1j5p_A Aspartate dehydrogenase 98.3 2.2E-07 7.5E-12 79.3 2.8 131 2-166 12-143 (253)
109 2d5c_A AROE, shikimate 5-dehyd 98.3 3E-07 1E-11 80.2 3.4 109 4-138 118-230 (263)
110 3l6d_A Putative oxidoreductase 98.3 2.6E-06 9E-11 75.9 9.6 104 2-122 9-117 (306)
111 3qha_A Putative oxidoreductase 98.3 2.4E-06 8.3E-11 75.7 9.3 104 2-122 15-121 (296)
112 4ezb_A Uncharacterized conserv 98.3 5.6E-06 1.9E-10 74.1 11.6 109 1-122 23-137 (317)
113 3g0o_A 3-hydroxyisobutyrate de 98.3 2.5E-06 8.7E-11 75.9 9.2 105 2-122 7-118 (303)
114 2fp4_A Succinyl-COA ligase [GD 98.3 1.6E-06 5.6E-11 76.8 7.6 105 3-122 14-120 (305)
115 3gg2_A Sugar dehydrogenase, UD 98.2 2.7E-06 9.1E-11 79.8 9.0 114 1-122 1-138 (450)
116 2h78_A Hibadh, 3-hydroxyisobut 98.2 3.6E-06 1.2E-10 74.9 9.4 103 3-122 4-113 (302)
117 1bg6_A N-(1-D-carboxylethyl)-L 98.2 2.5E-06 8.7E-11 77.7 8.4 99 2-108 4-113 (359)
118 1yb4_A Tartronic semialdehyde 98.2 1.1E-06 3.8E-11 77.8 5.7 103 2-122 3-112 (295)
119 3b1j_A Glyceraldehyde 3-phosph 98.2 4.3E-06 1.5E-10 75.0 9.2 105 1-107 1-126 (339)
120 3doj_A AT3G25530, dehydrogenas 98.2 2.9E-06 1E-10 75.7 7.8 103 3-122 22-131 (310)
121 3b1f_A Putative prephenate deh 98.2 5.6E-06 1.9E-10 73.1 9.6 84 1-96 4-89 (290)
122 2cvz_A Dehydrogenase, 3-hydrox 98.2 2.5E-06 8.4E-11 75.3 7.2 101 3-122 2-106 (289)
123 2ozp_A N-acetyl-gamma-glutamyl 98.2 8.4E-07 2.9E-11 80.2 3.9 94 2-104 4-99 (345)
124 4e21_A 6-phosphogluconate dehy 98.2 1.1E-05 3.6E-10 73.3 10.9 105 3-122 23-131 (358)
125 3nkl_A UDP-D-quinovosamine 4-d 98.2 1.1E-06 3.8E-11 68.8 3.7 90 3-102 5-97 (141)
126 1xyg_A Putative N-acetyl-gamma 98.1 1.3E-06 4.4E-11 79.4 4.4 94 2-103 16-111 (359)
127 2iz1_A 6-phosphogluconate dehy 98.1 9.9E-06 3.4E-10 76.6 10.5 111 1-122 3-119 (474)
128 2i99_A MU-crystallin homolog; 98.1 9.7E-07 3.3E-11 78.9 3.4 106 2-122 135-241 (312)
129 2x5j_O E4PDH, D-erythrose-4-ph 98.1 4.7E-06 1.6E-10 74.8 7.6 104 1-106 1-126 (339)
130 2d2i_A Glyceraldehyde 3-phosph 98.1 6E-06 2E-10 74.8 7.8 105 1-107 1-126 (380)
131 3qsg_A NAD-binding phosphogluc 98.1 1.6E-05 5.4E-10 71.0 9.9 105 3-122 25-133 (312)
132 1iuk_A Hypothetical protein TT 98.1 1.2E-06 4E-11 68.5 2.2 114 2-144 13-132 (140)
133 2y1e_A 1-deoxy-D-xylulose 5-ph 98.1 0.00023 7.7E-09 63.5 16.7 208 4-238 23-266 (398)
134 3pdu_A 3-hydroxyisobutyrate de 98.0 8.7E-06 3E-10 71.8 7.7 103 3-122 2-111 (287)
135 3cmc_O GAPDH, glyceraldehyde-3 98.0 1.1E-05 3.6E-10 72.3 7.9 103 3-107 2-123 (334)
136 1q0q_A 1-deoxy-D-xylulose 5-ph 98.0 0.00069 2.4E-08 60.6 17.9 210 4-238 11-274 (406)
137 1pgj_A 6PGDH, 6-PGDH, 6-phosph 98.0 6E-05 2E-09 71.3 11.9 112 2-122 1-119 (478)
138 3ggo_A Prephenate dehydrogenas 97.9 5.5E-05 1.9E-09 67.5 10.8 91 2-103 33-126 (314)
139 1yqg_A Pyrroline-5-carboxylate 97.9 5.8E-06 2E-10 71.8 4.3 93 3-110 1-93 (263)
140 2pgd_A 6-phosphogluconate dehy 97.9 3.3E-05 1.1E-09 73.2 9.5 110 2-122 2-117 (482)
141 1gad_O D-glyceraldehyde-3-phos 97.9 2.5E-05 8.4E-10 69.9 7.9 101 3-106 2-122 (330)
142 2uyy_A N-PAC protein; long-cha 97.9 2.6E-05 9E-10 69.7 7.9 103 3-122 31-140 (316)
143 1z82_A Glycerol-3-phosphate de 97.8 1.5E-05 5.1E-10 71.9 5.6 96 1-107 13-115 (335)
144 3cps_A Glyceraldehyde 3-phosph 97.8 2.4E-05 8.2E-10 70.3 6.7 102 2-106 17-139 (354)
145 2p4q_A 6-phosphogluconate dehy 97.8 8.6E-05 2.9E-09 70.4 10.8 112 1-122 9-125 (497)
146 2f1k_A Prephenate dehydrogenas 97.8 6.1E-05 2.1E-09 65.9 9.0 100 3-119 1-104 (279)
147 3dtt_A NADP oxidoreductase; st 97.8 3.5E-05 1.2E-09 66.2 7.1 78 2-93 19-110 (245)
148 2hk9_A Shikimate dehydrogenase 97.8 9.8E-06 3.4E-10 71.0 3.1 110 3-138 130-243 (275)
149 2o3j_A UDP-glucose 6-dehydroge 97.8 3.5E-05 1.2E-09 72.9 7.0 81 2-86 9-99 (481)
150 3au8_A 1-deoxy-D-xylulose 5-ph 97.8 0.0013 4.6E-08 59.7 16.6 211 4-238 79-350 (488)
151 3pid_A UDP-glucose 6-dehydroge 97.7 0.0001 3.5E-09 68.3 9.2 107 3-122 37-169 (432)
152 1hdg_O Holo-D-glyceraldehyde-3 97.7 4.9E-05 1.7E-09 67.9 6.7 103 3-107 1-124 (332)
153 4gwg_A 6-phosphogluconate dehy 97.7 0.00026 8.9E-09 66.6 11.9 111 3-122 5-119 (484)
154 1mv8_A GMD, GDP-mannose 6-dehy 97.7 9.6E-05 3.3E-09 69.1 8.9 75 3-86 1-89 (436)
155 1np3_A Ketol-acid reductoisome 97.7 2E-05 6.7E-10 71.2 3.7 87 3-104 17-107 (338)
156 2g5c_A Prephenate dehydrogenas 97.7 6.8E-05 2.3E-09 65.7 6.8 82 3-94 2-83 (281)
157 2q3e_A UDP-glucose 6-dehydroge 97.7 0.00017 5.7E-09 68.0 9.9 77 3-86 6-95 (467)
158 3c24_A Putative oxidoreductase 97.7 4.2E-05 1.4E-09 67.3 5.2 77 2-94 11-88 (286)
159 2zyd_A 6-phosphogluconate dehy 97.6 0.00041 1.4E-08 65.5 12.0 110 2-122 15-129 (480)
160 3fwz_A Inner membrane protein 97.6 0.0002 6.7E-09 55.7 8.2 105 1-118 6-116 (140)
161 1evy_A Glycerol-3-phosphate de 97.6 5.4E-05 1.9E-09 69.1 5.7 86 1-92 13-104 (366)
162 3hdj_A Probable ornithine cycl 97.6 1.8E-05 6E-10 70.5 1.7 92 3-104 122-213 (313)
163 1jay_A Coenzyme F420H2:NADP+ o 97.6 0.00011 3.8E-09 61.4 6.5 80 3-92 1-83 (212)
164 4dpl_A Malonyl-COA/succinyl-CO 97.5 0.00017 5.8E-09 65.3 7.7 89 2-102 7-108 (359)
165 4dpk_A Malonyl-COA/succinyl-CO 97.5 0.00017 5.8E-09 65.3 7.7 89 2-102 7-108 (359)
166 4a7p_A UDP-glucose dehydrogena 97.5 0.00013 4.4E-09 68.1 6.8 114 2-123 8-146 (446)
167 1rm4_O Glyceraldehyde 3-phosph 97.5 0.0002 6.8E-09 64.0 7.6 104 2-107 1-126 (337)
168 3dr3_A N-acetyl-gamma-glutamyl 97.5 8.6E-05 2.9E-09 66.5 5.1 92 3-102 5-104 (337)
169 3ktd_A Prephenate dehydrogenas 97.5 6.3E-05 2.2E-09 67.7 4.2 78 3-93 9-88 (341)
170 4e12_A Diketoreductase; oxidor 97.5 0.00056 1.9E-08 59.9 10.0 102 1-111 2-127 (283)
171 2vns_A Metalloreductase steap3 97.5 9.7E-05 3.3E-09 62.1 4.9 68 2-85 28-95 (215)
172 2rcy_A Pyrroline carboxylate r 97.5 4.1E-05 1.4E-09 66.3 2.6 75 1-94 2-79 (262)
173 2ep7_A GAPDH, glyceraldehyde-3 97.5 0.00011 3.7E-09 65.5 5.1 104 1-106 1-123 (342)
174 2y0c_A BCEC, UDP-glucose dehyd 97.4 0.00036 1.2E-08 65.8 8.8 112 2-120 8-142 (478)
175 2izz_A Pyrroline-5-carboxylate 97.4 0.00042 1.4E-08 62.0 8.9 79 2-93 22-104 (322)
176 1lss_A TRK system potassium up 97.4 0.00038 1.3E-08 53.7 7.2 91 3-102 5-100 (140)
177 3k96_A Glycerol-3-phosphate de 97.4 0.00013 4.6E-09 66.1 4.9 101 2-108 29-138 (356)
178 2g82_O GAPDH, glyceraldehyde-3 97.4 0.00035 1.2E-08 62.3 7.3 102 3-107 1-121 (331)
179 1txg_A Glycerol-3-phosphate de 97.4 0.00026 8.9E-09 63.6 6.4 83 3-93 1-91 (335)
180 1jw9_B Molybdopterin biosynthe 97.3 0.00025 8.6E-09 60.9 5.9 95 3-102 32-151 (249)
181 2ew2_A 2-dehydropantoate 2-red 97.3 0.00031 1E-08 62.4 6.5 90 1-94 2-95 (316)
182 2hjs_A USG-1 protein homolog; 97.3 4.1E-05 1.4E-09 69.0 0.6 90 1-102 5-97 (340)
183 3g79_A NDP-N-acetyl-D-galactos 97.3 0.00038 1.3E-08 65.4 7.1 106 3-117 19-158 (478)
184 2r00_A Aspartate-semialdehyde 97.3 4.7E-05 1.6E-09 68.5 0.8 89 2-102 3-94 (336)
185 3c85_A Putative glutathione-re 97.3 0.00097 3.3E-08 54.2 8.3 101 3-116 40-148 (183)
186 3c7a_A Octopine dehydrogenase; 97.2 0.00037 1.2E-08 64.5 6.3 106 1-111 1-122 (404)
187 2dpo_A L-gulonate 3-dehydrogen 97.2 0.00037 1.3E-08 62.1 5.8 74 4-86 8-100 (319)
188 1yj8_A Glycerol-3-phosphate de 97.2 0.00022 7.7E-09 65.2 4.4 88 1-92 20-122 (375)
189 1hyh_A L-hicdh, L-2-hydroxyiso 97.2 0.0013 4.4E-08 58.4 8.6 77 3-86 2-82 (309)
190 1obf_O Glyceraldehyde 3-phosph 97.2 0.0013 4.5E-08 58.4 8.5 102 3-106 2-125 (335)
191 1dlj_A UDP-glucose dehydrogena 97.1 0.0014 4.8E-08 60.5 8.7 70 3-85 1-85 (402)
192 3lvf_P GAPDH 1, glyceraldehyde 97.1 0.0036 1.2E-07 55.3 10.5 102 1-107 3-126 (338)
193 2csu_A 457AA long hypothetical 97.1 0.00069 2.3E-08 63.5 6.3 108 2-134 8-125 (457)
194 1f0y_A HCDH, L-3-hydroxyacyl-C 97.1 0.00086 2.9E-08 59.3 6.5 73 4-85 17-112 (302)
195 3l4b_C TRKA K+ channel protien 97.1 0.0023 7.8E-08 53.6 8.8 102 3-116 1-108 (218)
196 3d4o_A Dipicolinate synthase s 97.0 0.0012 4E-08 58.2 7.2 82 3-97 156-237 (293)
197 3hsk_A Aspartate-semialdehyde 97.0 0.0004 1.4E-08 63.2 4.1 96 2-102 19-122 (381)
198 2rir_A Dipicolinate synthase, 97.0 0.00088 3E-08 59.2 6.0 70 3-85 158-227 (300)
199 1ur5_A Malate dehydrogenase; o 97.0 0.0016 5.4E-08 57.8 7.6 77 1-84 1-81 (309)
200 3ego_A Probable 2-dehydropanto 97.0 0.0008 2.7E-08 59.7 5.7 85 1-92 1-86 (307)
201 3fr7_A Putative ketol-acid red 97.0 0.00041 1.4E-08 64.4 3.7 82 3-93 55-141 (525)
202 3jtm_A Formate dehydrogenase, 97.0 0.00076 2.6E-08 60.8 5.4 67 3-84 165-231 (351)
203 3h9e_O Glyceraldehyde-3-phosph 97.0 0.0045 1.5E-07 55.0 10.2 103 2-107 7-129 (346)
204 3vtf_A UDP-glucose 6-dehydroge 97.0 0.0038 1.3E-07 57.8 10.2 71 4-83 23-107 (444)
205 2qyt_A 2-dehydropantoate 2-red 97.0 0.00092 3.1E-08 59.4 5.9 81 1-93 7-103 (317)
206 3ojo_A CAP5O; rossmann fold, c 97.0 0.0022 7.4E-08 59.4 8.4 103 4-120 13-143 (431)
207 1npy_A Hypothetical shikimate 96.9 0.00039 1.3E-08 60.5 3.1 112 4-140 121-239 (271)
208 1gpj_A Glutamyl-tRNA reductase 96.9 0.0016 5.4E-08 60.1 7.4 89 3-103 168-264 (404)
209 3doc_A Glyceraldehyde 3-phosph 96.9 0.0037 1.3E-07 55.3 9.2 102 1-106 1-125 (335)
210 1zud_1 Adenylyltransferase THI 96.9 0.0014 4.7E-08 56.3 6.3 95 3-102 29-148 (251)
211 1x0v_A GPD-C, GPDH-C, glycerol 96.9 0.00099 3.4E-08 60.3 5.7 87 3-93 9-110 (354)
212 2egg_A AROE, shikimate 5-dehyd 96.9 0.00028 9.7E-09 62.3 2.0 118 3-138 142-264 (297)
213 2ph5_A Homospermidine synthase 96.9 0.00051 1.8E-08 63.8 3.7 94 2-103 13-113 (480)
214 3llv_A Exopolyphosphatase-rela 96.9 0.0016 5.6E-08 50.3 6.2 100 4-116 8-112 (141)
215 3pwk_A Aspartate-semialdehyde 96.9 0.00017 5.7E-09 65.3 0.4 89 1-102 1-93 (366)
216 3i83_A 2-dehydropantoate 2-red 96.9 0.00092 3.2E-08 59.7 4.9 99 1-107 1-109 (320)
217 2yjz_A Metalloreductase steap4 95.9 0.00017 5.7E-09 59.9 0.0 67 1-84 18-84 (201)
218 3l9w_A Glutathione-regulated p 96.8 0.0055 1.9E-07 56.6 9.9 104 2-118 4-113 (413)
219 3v1y_O PP38, glyceraldehyde-3- 96.8 0.0039 1.3E-07 55.2 8.3 105 1-107 1-128 (337)
220 3ids_C GAPDH, glyceraldehyde-3 96.7 0.0043 1.5E-07 55.3 8.0 105 1-107 1-138 (359)
221 1vm6_A DHPR, dihydrodipicolina 96.7 0.011 3.9E-07 49.1 10.0 109 3-153 13-122 (228)
222 3u62_A Shikimate dehydrogenase 96.7 0.00048 1.7E-08 59.2 1.6 70 4-86 110-179 (253)
223 3rui_A Ubiquitin-like modifier 96.7 0.0034 1.2E-07 55.9 7.1 95 3-102 35-169 (340)
224 2hjr_A Malate dehydrogenase; m 96.7 0.0054 1.8E-07 54.8 8.4 75 1-82 13-91 (328)
225 3h8v_A Ubiquitin-like modifier 96.6 0.002 6.7E-08 56.4 5.2 96 3-101 37-166 (292)
226 2d0i_A Dehydrogenase; structur 96.6 0.0026 9E-08 57.0 6.0 65 3-84 147-211 (333)
227 3hwr_A 2-dehydropantoate 2-red 96.6 0.0029 9.8E-08 56.4 6.2 98 2-107 19-124 (318)
228 3phh_A Shikimate dehydrogenase 96.6 0.0057 1.9E-07 52.8 7.8 112 4-146 120-240 (269)
229 1mx3_A CTBP1, C-terminal bindi 96.6 0.0015 5E-08 58.9 4.2 67 3-85 169-235 (347)
230 2g1u_A Hypothetical protein TM 96.6 0.0017 5.9E-08 51.2 4.2 85 3-96 20-107 (155)
231 4g2n_A D-isomer specific 2-hyd 96.6 0.0015 5E-08 58.8 4.1 65 3-84 174-238 (345)
232 3gg9_A D-3-phosphoglycerate de 96.6 0.0015 5.2E-08 58.9 4.3 67 3-85 161-227 (352)
233 1a5z_A L-lactate dehydrogenase 96.6 0.0061 2.1E-07 54.3 8.2 77 3-86 1-80 (319)
234 1pzg_A LDH, lactate dehydrogen 96.6 0.0029 1E-07 56.6 6.0 75 2-81 9-86 (331)
235 2nqt_A N-acetyl-gamma-glutamyl 96.6 0.0028 9.5E-08 57.1 5.9 91 1-102 7-108 (352)
236 2ekl_A D-3-phosphoglycerate de 96.6 0.002 6.8E-08 57.2 4.8 66 3-85 143-208 (313)
237 1oju_A MDH, malate dehydrogena 96.5 0.0027 9.2E-08 55.8 5.3 77 3-84 1-80 (294)
238 2nac_A NAD-dependent formate d 96.5 0.0026 8.8E-08 58.1 5.4 67 3-84 192-258 (393)
239 2w2k_A D-mandelate dehydrogena 96.5 0.0022 7.4E-08 57.9 4.9 68 3-85 164-232 (348)
240 2b4r_O Glyceraldehyde-3-phosph 96.5 0.0096 3.3E-07 53.0 8.8 104 2-107 11-134 (345)
241 2g0t_A Conserved hypothetical 96.5 0.0036 1.2E-07 56.1 6.1 111 4-123 24-143 (350)
242 1zej_A HBD-9, 3-hydroxyacyl-CO 96.5 0.0034 1.2E-07 55.1 5.9 75 3-88 13-88 (293)
243 3jyo_A Quinate/shikimate dehyd 96.5 0.0031 1.1E-07 55.0 5.6 78 4-86 129-207 (283)
244 3pym_A GAPDH 3, glyceraldehyde 96.5 0.02 6.7E-07 50.6 10.5 102 3-106 2-123 (332)
245 1gdh_A D-glycerate dehydrogena 96.5 0.0025 8.4E-08 56.8 4.9 67 3-85 147-214 (320)
246 1leh_A Leucine dehydrogenase; 96.5 0.0043 1.5E-07 56.1 6.5 98 3-117 174-273 (364)
247 4hy3_A Phosphoglycerate oxidor 96.5 0.0024 8.2E-08 57.7 4.8 66 3-85 177-242 (365)
248 1u8x_X Maltose-6'-phosphate gl 96.5 0.0071 2.4E-07 56.7 8.1 82 2-85 28-114 (472)
249 4gsl_A Ubiquitin-like modifier 96.4 0.0052 1.8E-07 58.8 7.1 95 3-102 327-461 (615)
250 3evt_A Phosphoglycerate dehydr 96.4 0.00097 3.3E-08 59.4 1.9 65 3-84 138-202 (324)
251 3ff4_A Uncharacterized protein 96.4 0.0029 9.8E-08 47.7 4.2 99 4-134 6-109 (122)
252 3hn2_A 2-dehydropantoate 2-red 96.4 0.0048 1.7E-07 54.7 6.3 97 1-106 1-106 (312)
253 2j6i_A Formate dehydrogenase; 96.4 0.0027 9.1E-08 57.6 4.6 68 3-85 165-233 (364)
254 1lld_A L-lactate dehydrogenase 96.4 0.0081 2.8E-07 53.4 7.8 80 1-87 6-89 (319)
255 4e5n_A Thermostable phosphite 96.4 0.0024 8.4E-08 57.1 4.3 66 3-84 146-211 (330)
256 1guz_A Malate dehydrogenase; o 96.4 0.0097 3.3E-07 52.7 8.0 76 3-84 1-80 (310)
257 1s6y_A 6-phospho-beta-glucosid 96.3 0.0081 2.8E-07 56.0 7.7 81 2-85 7-95 (450)
258 2hmt_A YUAA protein; RCK, KTN, 96.3 0.0027 9.1E-08 49.0 3.8 85 4-98 8-97 (144)
259 2dbq_A Glyoxylate reductase; D 96.3 0.0036 1.2E-07 56.1 5.0 66 3-85 151-216 (334)
260 3vh1_A Ubiquitin-like modifier 96.3 0.0068 2.3E-07 58.0 6.9 95 3-102 328-462 (598)
261 1ldn_A L-lactate dehydrogenase 96.3 0.0066 2.2E-07 54.0 6.4 79 2-85 6-86 (316)
262 2g76_A 3-PGDH, D-3-phosphoglyc 96.3 0.004 1.4E-07 55.8 5.0 66 3-85 166-231 (335)
263 1t2d_A LDH-P, L-lactate dehydr 96.2 0.0066 2.3E-07 54.1 6.3 72 3-81 5-80 (322)
264 1p77_A Shikimate 5-dehydrogena 96.2 0.0078 2.7E-07 52.3 6.6 75 3-87 120-194 (272)
265 2obn_A Hypothetical protein; s 96.2 0.011 3.6E-07 52.9 7.5 107 4-122 9-126 (349)
266 2gcg_A Glyoxylate reductase/hy 96.2 0.0031 1.1E-07 56.4 4.1 67 3-85 156-222 (330)
267 3o8q_A Shikimate 5-dehydrogena 96.2 0.0066 2.3E-07 52.9 5.9 73 4-86 128-200 (281)
268 1wwk_A Phosphoglycerate dehydr 96.2 0.0036 1.2E-07 55.4 4.2 66 3-85 143-208 (307)
269 4dib_A GAPDH, glyceraldehyde 3 96.2 0.023 8E-07 50.3 9.2 100 2-106 4-125 (345)
270 3pqe_A L-LDH, L-lactate dehydr 96.1 0.0056 1.9E-07 54.5 5.3 75 2-83 5-83 (326)
271 3pp8_A Glyoxylate/hydroxypyruv 96.1 0.0015 5.2E-08 58.0 1.5 65 3-84 140-204 (315)
272 3hja_A GAPDH, glyceraldehyde-3 96.1 0.0022 7.4E-08 57.1 2.4 103 1-106 20-146 (356)
273 3hg7_A D-isomer specific 2-hyd 96.1 0.0025 8.6E-08 56.7 2.9 66 3-85 141-206 (324)
274 2ewd_A Lactate dehydrogenase,; 96.1 0.009 3.1E-07 53.1 6.5 74 2-82 4-81 (317)
275 3fbt_A Chorismate mutase and s 96.1 0.0065 2.2E-07 52.9 5.4 117 4-145 124-245 (282)
276 3mog_A Probable 3-hydroxybutyr 96.1 0.009 3.1E-07 56.3 6.7 80 4-93 7-106 (483)
277 2v6b_A L-LDH, L-lactate dehydr 96.1 0.012 4.1E-07 51.9 7.1 77 3-86 1-80 (304)
278 2pv7_A T-protein [includes: ch 96.1 0.0049 1.7E-07 54.3 4.5 88 2-118 21-111 (298)
279 1obb_A Maltase, alpha-glucosid 96.0 0.0081 2.8E-07 56.3 6.0 80 2-85 3-89 (480)
280 2pi1_A D-lactate dehydrogenase 96.0 0.0044 1.5E-07 55.5 4.0 64 3-84 142-205 (334)
281 2bh9_A G6PD, glucose-6-phospha 96.0 0.036 1.2E-06 51.4 10.1 191 4-209 7-251 (489)
282 3vku_A L-LDH, L-lactate dehydr 96.0 0.014 4.6E-07 52.0 7.1 74 3-83 10-86 (326)
283 3fef_A Putative glucosidase LP 96.0 0.015 5E-07 54.1 7.6 76 3-84 6-86 (450)
284 3pwz_A Shikimate dehydrogenase 96.0 0.0079 2.7E-07 52.2 5.3 73 4-86 122-194 (272)
285 3gvx_A Glycerate dehydrogenase 96.0 0.0029 9.9E-08 55.4 2.4 62 3-84 123-184 (290)
286 3d0o_A L-LDH 1, L-lactate dehy 96.0 0.015 5.2E-07 51.6 7.2 77 2-85 6-86 (317)
287 3gvi_A Malate dehydrogenase; N 95.9 0.018 6.3E-07 51.1 7.6 77 1-84 5-86 (324)
288 4dgs_A Dehydrogenase; structur 95.9 0.0039 1.3E-07 55.9 3.1 62 3-84 172-233 (340)
289 3g17_A Similar to 2-dehydropan 95.9 0.00074 2.5E-08 59.5 -1.7 82 1-93 1-82 (294)
290 1vkn_A N-acetyl-gamma-glutamyl 95.9 0.0054 1.9E-07 55.0 3.9 88 3-101 14-104 (351)
291 3ba1_A HPPR, hydroxyphenylpyru 95.9 0.0035 1.2E-07 56.1 2.6 63 3-85 165-227 (333)
292 1smk_A Malate dehydrogenase, g 95.9 0.018 6.2E-07 51.3 7.3 79 1-84 7-87 (326)
293 3h5n_A MCCB protein; ubiquitin 95.8 0.018 6E-07 52.0 7.1 94 3-102 119-239 (353)
294 3don_A Shikimate dehydrogenase 95.8 0.00095 3.2E-08 58.1 -1.3 119 4-145 119-241 (277)
295 3ldh_A Lactate dehydrogenase; 95.8 0.0099 3.4E-07 52.9 5.3 76 3-83 22-99 (330)
296 3ghy_A Ketopantoate reductase 95.8 0.0071 2.4E-07 54.2 4.4 98 1-106 1-107 (335)
297 1ygy_A PGDH, D-3-phosphoglycer 95.8 0.0083 2.8E-07 57.3 5.0 65 3-84 143-207 (529)
298 2o4c_A Erythronate-4-phosphate 95.8 0.0068 2.3E-07 55.1 4.1 64 3-86 117-180 (380)
299 4aj2_A L-lactate dehydrogenase 95.7 0.016 5.6E-07 51.6 6.4 75 3-82 20-96 (331)
300 4fgw_A Glycerol-3-phosphate de 95.7 0.0031 1.1E-07 57.4 1.8 102 2-106 34-154 (391)
301 1ez4_A Lactate dehydrogenase; 95.7 0.021 7.2E-07 50.7 7.1 77 2-85 5-84 (318)
302 2cuk_A Glycerate dehydrogenase 95.7 0.0042 1.4E-07 55.1 2.5 61 3-85 145-205 (311)
303 2zqz_A L-LDH, L-lactate dehydr 95.7 0.021 7.2E-07 50.9 7.0 78 2-86 9-89 (326)
304 1zcj_A Peroxisomal bifunctiona 95.7 0.02 6.7E-07 53.8 7.1 74 4-85 39-126 (463)
305 1j4a_A D-LDH, D-lactate dehydr 95.7 0.0089 3.1E-07 53.5 4.6 65 3-85 147-211 (333)
306 1ks9_A KPA reductase;, 2-dehyd 95.7 0.0024 8.2E-08 55.8 0.8 82 3-94 1-84 (291)
307 1y8q_A Ubiquitin-like 1 activa 95.7 0.025 8.6E-07 50.8 7.5 76 3-83 37-135 (346)
308 4g65_A TRK system potassium up 95.7 0.015 5E-07 54.5 6.1 81 2-91 3-86 (461)
309 2x0j_A Malate dehydrogenase; o 95.7 0.014 5E-07 51.0 5.6 74 3-81 1-77 (294)
310 1dpg_A G6PD, glucose 6-phospha 95.6 0.04 1.4E-06 51.1 8.7 121 75-204 112-249 (485)
311 3mwd_B ATP-citrate synthase; A 95.6 0.019 6.5E-07 51.1 6.4 113 3-123 11-130 (334)
312 3nep_X Malate dehydrogenase; h 95.6 0.016 5.6E-07 51.2 5.8 76 3-84 1-80 (314)
313 3h9u_A Adenosylhomocysteinase; 95.6 0.02 6.8E-07 52.6 6.4 63 3-81 212-274 (436)
314 3tz6_A Aspartate-semialdehyde 95.6 0.0026 8.7E-08 57.1 0.5 88 2-102 1-92 (344)
315 2yq5_A D-isomer specific 2-hyd 95.6 0.0067 2.3E-07 54.4 3.2 63 3-84 149-211 (343)
316 1qp8_A Formate dehydrogenase; 95.6 0.0075 2.6E-07 53.2 3.5 62 3-85 125-186 (303)
317 1id1_A Putative potassium chan 95.5 0.039 1.3E-06 43.1 7.3 104 3-116 4-114 (153)
318 3t4e_A Quinate/shikimate dehyd 95.5 0.019 6.3E-07 50.8 5.8 78 4-86 150-233 (312)
319 3ce6_A Adenosylhomocysteinase; 95.4 0.022 7.4E-07 53.6 6.2 66 3-84 275-340 (494)
320 3tum_A Shikimate dehydrogenase 95.4 0.019 6.5E-07 49.6 5.3 74 4-86 127-200 (269)
321 1t4b_A Aspartate-semialdehyde 95.3 0.0051 1.7E-07 55.8 1.6 94 3-107 2-100 (367)
322 3oet_A Erythronate-4-phosphate 95.3 0.014 4.9E-07 52.9 4.5 62 3-84 120-181 (381)
323 1nyt_A Shikimate 5-dehydrogena 95.3 0.032 1.1E-06 48.3 6.6 74 3-86 120-193 (271)
324 2xxj_A L-LDH, L-lactate dehydr 95.2 0.022 7.4E-07 50.4 5.4 75 3-84 1-78 (310)
325 3ulk_A Ketol-acid reductoisome 95.2 0.029 1E-06 51.3 6.2 74 4-92 39-117 (491)
326 3k6j_A Protein F01G10.3, confi 95.2 0.033 1.1E-06 51.8 6.7 74 4-87 56-144 (460)
327 3eag_A UDP-N-acetylmuramate:L- 95.2 0.055 1.9E-06 48.1 8.0 90 3-103 5-96 (326)
328 3kb6_A D-lactate dehydrogenase 95.1 0.013 4.3E-07 52.5 3.6 64 3-84 142-205 (334)
329 1y6j_A L-lactate dehydrogenase 95.1 0.029 9.9E-07 49.8 5.9 76 2-84 7-85 (318)
330 1tt5_A APPBP1, amyloid protein 95.1 0.05 1.7E-06 51.8 7.8 92 3-99 33-151 (531)
331 1y8q_B Anthracycline-, ubiquit 95.1 0.033 1.1E-06 53.9 6.5 94 3-101 18-137 (640)
332 3tnl_A Shikimate dehydrogenase 95.1 0.037 1.3E-06 48.9 6.4 77 4-86 156-239 (315)
333 3lk7_A UDP-N-acetylmuramoylala 95.1 0.043 1.5E-06 51.3 7.2 93 3-103 10-102 (451)
334 2aef_A Calcium-gated potassium 95.1 0.022 7.6E-07 48.0 4.8 101 2-117 9-115 (234)
335 1dxy_A D-2-hydroxyisocaproate 95.1 0.0067 2.3E-07 54.3 1.6 64 3-85 146-209 (333)
336 1gr0_A Inositol-3-phosphate sy 95.0 0.069 2.4E-06 47.5 7.8 128 2-140 15-199 (367)
337 2raf_A Putative dinucleotide-b 95.0 0.014 4.7E-07 48.5 3.2 72 2-107 19-94 (209)
338 3n58_A Adenosylhomocysteinase; 95.0 0.038 1.3E-06 50.9 6.2 63 4-82 249-311 (464)
339 3gvp_A Adenosylhomocysteinase 95.0 0.037 1.2E-06 50.8 6.1 61 4-80 222-282 (435)
340 3k5p_A D-3-phosphoglycerate de 94.9 0.0077 2.6E-07 55.3 1.6 64 3-85 157-220 (416)
341 3fi9_A Malate dehydrogenase; s 94.8 0.054 1.9E-06 48.5 6.9 74 3-81 9-84 (343)
342 1mld_A Malate dehydrogenase; o 94.8 0.069 2.4E-06 47.3 7.4 76 3-84 1-79 (314)
343 1xdw_A NAD+-dependent (R)-2-hy 94.8 0.0098 3.4E-07 53.2 1.9 64 3-85 147-210 (331)
344 3mb5_A SAM-dependent methyltra 94.8 0.092 3.1E-06 44.6 8.0 95 3-103 95-193 (255)
345 3p7m_A Malate dehydrogenase; p 94.8 0.043 1.5E-06 48.7 5.9 76 1-83 3-83 (321)
346 1sc6_A PGDH, D-3-phosphoglycer 94.8 0.0092 3.2E-07 54.8 1.7 64 3-85 146-209 (404)
347 2vhw_A Alanine dehydrogenase; 94.7 0.032 1.1E-06 50.8 5.1 73 3-84 169-242 (377)
348 2yvl_A TRMI protein, hypotheti 94.5 0.085 2.9E-06 44.5 7.1 72 3-82 93-167 (248)
349 3d64_A Adenosylhomocysteinase; 94.5 0.037 1.3E-06 51.9 5.0 63 3-81 278-340 (494)
350 1pjc_A Protein (L-alanine dehy 94.5 0.049 1.7E-06 49.3 5.7 74 3-85 168-242 (361)
351 1v8b_A Adenosylhomocysteinase; 94.4 0.046 1.6E-06 51.1 5.6 63 3-81 258-320 (479)
352 3u95_A Glycoside hydrolase, fa 94.3 0.046 1.6E-06 51.3 5.3 76 3-81 1-84 (477)
353 1up7_A 6-phospho-beta-glucosid 94.3 0.08 2.7E-06 48.7 6.7 80 2-84 2-84 (417)
354 1o6z_A MDH, malate dehydrogena 94.3 0.088 3E-06 46.3 6.8 75 3-84 1-81 (303)
355 3pzr_A Aspartate-semialdehyde 94.2 0.022 7.7E-07 51.4 2.9 94 3-107 1-99 (370)
356 3ius_A Uncharacterized conserv 94.2 0.12 3.9E-06 44.7 7.4 71 1-84 4-74 (286)
357 2d4a_B Malate dehydrogenase; a 94.0 0.094 3.2E-06 46.2 6.4 75 4-85 1-79 (308)
358 3fpf_A Mtnas, putative unchara 94.0 0.24 8.3E-06 43.1 8.9 72 3-81 124-196 (298)
359 3dqp_A Oxidoreductase YLBE; al 94.0 0.042 1.4E-06 45.6 4.0 104 3-141 1-110 (219)
360 2wtb_A MFP2, fatty acid multif 94.0 0.05 1.7E-06 53.9 5.1 76 4-86 314-404 (725)
361 2yv3_A Aspartate-semialdehyde 94.0 0.0045 1.5E-07 55.3 -2.2 86 3-101 1-89 (331)
362 1c1d_A L-phenylalanine dehydro 93.9 0.11 3.9E-06 46.5 6.9 84 3-104 176-260 (355)
363 3njr_A Precorrin-6Y methylase; 93.9 0.55 1.9E-05 38.4 10.7 71 3-81 57-130 (204)
364 3gjy_A Spermidine synthase; AP 93.9 0.59 2E-05 41.2 11.3 131 2-162 90-227 (317)
365 3hm2_A Precorrin-6Y C5,15-meth 93.9 0.26 9.1E-06 38.9 8.5 73 3-83 27-104 (178)
366 3uw3_A Aspartate-semialdehyde 93.7 0.049 1.7E-06 49.3 4.1 94 2-106 4-102 (377)
367 1wdk_A Fatty oxidation complex 93.6 0.055 1.9E-06 53.6 4.6 74 3-86 315-406 (715)
368 2i6t_A Ubiquitin-conjugating e 93.6 0.1 3.6E-06 45.8 5.9 71 3-81 15-85 (303)
369 3cmm_A Ubiquitin-activating en 93.5 0.075 2.6E-06 54.4 5.5 33 3-38 28-60 (1015)
370 1o54_A SAM-dependent O-methylt 93.5 0.2 7E-06 43.1 7.6 75 3-82 114-190 (277)
371 3jv7_A ADH-A; dehydrogenase, n 93.4 0.14 4.8E-06 45.8 6.6 90 4-102 174-269 (345)
372 2eez_A Alanine dehydrogenase; 93.3 0.056 1.9E-06 49.0 3.9 73 3-84 167-240 (369)
373 3dfu_A Uncharacterized protein 93.3 0.17 6E-06 42.4 6.5 30 2-34 6-35 (232)
374 1tt5_B Ubiquitin-activating en 93.2 0.14 4.9E-06 47.3 6.4 88 3-95 41-152 (434)
375 1hye_A L-lactate/malate dehydr 93.2 0.13 4.4E-06 45.5 5.9 75 3-82 1-83 (313)
376 3e05_A Precorrin-6Y C5,15-meth 93.1 0.22 7.5E-06 40.6 7.0 74 3-83 42-118 (204)
377 1qyd_A Pinoresinol-lariciresin 93.0 0.3 1E-05 42.7 8.0 73 3-84 5-87 (313)
378 1b8p_A Protein (malate dehydro 92.9 0.11 3.9E-06 46.1 5.2 78 2-83 5-93 (329)
379 3ado_A Lambda-crystallin; L-gu 92.9 0.11 3.9E-06 45.8 5.0 77 4-86 8-100 (319)
380 4eez_A Alcohol dehydrogenase 1 92.8 0.2 6.8E-06 44.8 6.7 92 4-102 166-262 (348)
381 1hdo_A Biliverdin IX beta redu 92.8 0.052 1.8E-06 44.3 2.6 108 1-140 1-114 (206)
382 4dvj_A Putative zinc-dependent 92.8 0.52 1.8E-05 42.4 9.5 97 4-109 174-276 (363)
383 3r6d_A NAD-dependent epimerase 92.6 0.64 2.2E-05 38.2 9.2 101 3-142 5-113 (221)
384 3dfz_A SIRC, precorrin-2 dehyd 92.5 0.18 6.2E-06 42.0 5.5 129 3-154 32-163 (223)
385 3tl2_A Malate dehydrogenase; c 92.4 0.39 1.3E-05 42.4 7.9 73 3-82 9-87 (315)
386 2pwy_A TRNA (adenine-N(1)-)-me 92.3 0.29 1E-05 41.4 6.8 75 3-83 98-176 (258)
387 1lnq_A MTHK channels, potassiu 92.2 0.2 6.9E-06 44.6 5.8 99 3-116 116-220 (336)
388 4ea9_A Perosamine N-acetyltran 91.9 0.26 8.9E-06 40.9 5.9 83 4-99 14-97 (220)
389 2py6_A Methyltransferase FKBM; 91.9 0.034 1.2E-06 51.2 0.4 81 3-97 53-133 (409)
390 3c1o_A Eugenol synthase; pheny 91.8 0.53 1.8E-05 41.2 8.2 88 1-97 3-104 (321)
391 3i6i_A Putative leucoanthocyan 91.8 0.26 8.9E-06 43.9 6.2 74 3-83 11-93 (346)
392 3s2e_A Zinc-containing alcohol 91.7 0.69 2.4E-05 41.1 8.9 91 4-102 169-262 (340)
393 1yqd_A Sinapyl alcohol dehydro 91.7 0.91 3.1E-05 40.8 9.8 90 4-102 190-281 (366)
394 3hn7_A UDP-N-acetylmuramate-L- 91.7 0.37 1.3E-05 45.8 7.4 90 3-104 20-111 (524)
395 1qyc_A Phenylcoumaran benzylic 91.7 0.5 1.7E-05 41.1 7.8 86 3-97 5-104 (308)
396 2h6e_A ADH-4, D-arabinose 1-de 91.6 0.52 1.8E-05 42.0 7.9 131 4-158 173-312 (344)
397 3e48_A Putative nucleoside-dip 91.5 0.055 1.9E-06 46.9 1.3 91 3-123 1-96 (289)
398 3h2s_A Putative NADH-flavin re 91.4 0.13 4.4E-06 42.5 3.4 93 3-123 1-96 (224)
399 2fca_A TRNA (guanine-N(7)-)-me 91.2 3 0.0001 34.0 11.8 74 4-84 41-119 (213)
400 3p2y_A Alanine dehydrogenase/p 91.1 0.28 9.7E-06 44.3 5.6 41 3-47 185-225 (381)
401 1l7d_A Nicotinamide nucleotide 91.1 0.25 8.6E-06 45.0 5.3 41 3-47 173-213 (384)
402 3dmy_A Protein FDRA; predicted 91.0 0.32 1.1E-05 45.4 6.0 60 63-123 25-85 (480)
403 1yzh_A TRNA (guanine-N(7)-)-me 91.0 0.83 2.8E-05 37.4 8.1 73 4-83 44-121 (214)
404 4a2c_A Galactitol-1-phosphate 91.0 0.37 1.3E-05 42.9 6.3 90 4-102 163-258 (346)
405 1p91_A Ribosomal RNA large sub 90.9 0.38 1.3E-05 41.0 6.1 95 3-109 87-183 (269)
406 3m2p_A UDP-N-acetylglucosamine 90.9 0.15 5.3E-06 44.6 3.7 112 1-141 1-113 (311)
407 3r4v_A Putative uncharacterize 90.9 0.21 7.2E-06 42.8 4.2 88 1-106 1-121 (315)
408 3sz8_A 2-dehydro-3-deoxyphosph 90.8 1.7 5.8E-05 37.5 9.8 59 64-124 103-161 (285)
409 4hv4_A UDP-N-acetylmuramate--L 90.8 0.57 2E-05 44.1 7.6 87 4-103 24-111 (494)
410 3ew7_A LMO0794 protein; Q8Y8U8 90.6 0.82 2.8E-05 37.3 7.7 90 3-123 1-93 (221)
411 1nvt_A Shikimate 5'-dehydrogen 90.6 0.37 1.3E-05 41.9 5.7 74 4-86 130-206 (287)
412 3e8x_A Putative NAD-dependent 90.6 0.93 3.2E-05 37.7 8.1 107 2-137 21-131 (236)
413 3tqq_A Methionyl-tRNA formyltr 90.6 0.51 1.7E-05 41.6 6.6 73 1-81 1-88 (314)
414 2nvu_B Maltose binding protein 90.5 0.47 1.6E-05 47.7 7.1 88 3-95 412-523 (805)
415 3cmm_A Ubiquitin-activating en 90.5 0.27 9.2E-06 50.4 5.3 94 2-100 425-554 (1015)
416 3dxy_A TRNA (guanine-N(7)-)-me 90.4 0.91 3.1E-05 37.5 7.8 74 4-84 37-116 (218)
417 3ond_A Adenosylhomocysteinase; 90.4 0.43 1.5E-05 44.5 6.2 64 4-83 267-330 (488)
418 3nvt_A 3-deoxy-D-arabino-heptu 90.3 2.6 8.8E-05 38.1 11.1 59 64-124 218-276 (385)
419 4dio_A NAD(P) transhydrogenase 90.3 0.33 1.1E-05 44.3 5.2 42 2-47 190-231 (405)
420 2gas_A Isoflavone reductase; N 90.2 0.71 2.4E-05 40.0 7.4 86 3-97 3-103 (307)
421 1i9g_A Hypothetical protein RV 90.2 0.75 2.6E-05 39.4 7.4 75 3-83 101-181 (280)
422 1dz3_A Stage 0 sporulation pro 90.1 1.2 4.2E-05 32.7 7.7 110 1-119 1-119 (130)
423 3fs2_A 2-dehydro-3-deoxyphosph 90.1 2.3 7.9E-05 36.8 10.1 56 68-124 127-182 (298)
424 2r6j_A Eugenol synthase 1; phe 90.1 0.65 2.2E-05 40.6 7.0 86 3-97 12-106 (318)
425 2cf5_A Atccad5, CAD, cinnamyl 90.0 0.85 2.9E-05 40.8 7.8 90 4-102 183-274 (357)
426 2yxd_A Probable cobalt-precorr 90.0 2.9 0.0001 32.6 10.4 72 3-82 37-109 (183)
427 4gx0_A TRKA domain protein; me 89.9 1.1 3.8E-05 42.9 8.9 103 2-117 127-234 (565)
428 1x13_A NAD(P) transhydrogenase 89.8 0.35 1.2E-05 44.2 5.1 41 3-47 173-213 (401)
429 4e9i_A Glucose-6-phosphate 1-d 89.8 0.44 1.5E-05 44.7 5.8 119 76-208 167-308 (541)
430 1uir_A Polyamine aminopropyltr 89.8 1.3 4.5E-05 38.9 8.7 75 3-83 79-161 (314)
431 2o07_A Spermidine synthase; st 89.7 1.9 6.5E-05 37.6 9.7 128 3-158 97-233 (304)
432 3krt_A Crotonyl COA reductase; 89.6 1 3.4E-05 41.9 8.2 83 4-97 231-337 (456)
433 3gpi_A NAD-dependent epimerase 89.5 0.11 3.7E-06 44.9 1.4 111 1-141 1-113 (286)
434 3sc6_A DTDP-4-dehydrorhamnose 89.5 0.38 1.3E-05 41.4 5.0 63 1-84 4-67 (287)
435 4h7p_A Malate dehydrogenase; s 89.5 0.4 1.4E-05 42.8 5.1 77 2-81 24-108 (345)
436 1o60_A 2-dehydro-3-deoxyphosph 89.4 3.7 0.00013 35.5 11.0 56 68-124 104-159 (292)
437 1lu9_A Methylene tetrahydromet 89.4 0.49 1.7E-05 41.0 5.6 74 4-84 121-199 (287)
438 2tmg_A Protein (glutamate dehy 89.4 1.6 5.6E-05 39.8 9.1 102 3-118 210-328 (415)
439 3da8_A Probable 5'-phosphoribo 89.3 0.53 1.8E-05 38.9 5.3 77 1-84 11-100 (215)
440 3bwc_A Spermidine synthase; SA 89.2 2.4 8.3E-05 36.9 9.9 75 3-83 97-179 (304)
441 1piw_A Hypothetical zinc-type 89.0 0.63 2.2E-05 41.7 6.1 83 4-97 182-269 (360)
442 3hhp_A Malate dehydrogenase; M 89.0 0.61 2.1E-05 41.0 5.8 76 3-84 1-80 (312)
443 2i7c_A Spermidine synthase; tr 88.8 5.7 0.00019 34.1 11.9 76 3-84 80-162 (283)
444 4ej6_A Putative zinc-binding d 88.8 0.53 1.8E-05 42.5 5.5 130 4-158 185-328 (370)
445 3pff_A ATP-citrate synthase; p 88.8 0.61 2.1E-05 46.5 6.2 60 63-123 554-616 (829)
446 1vs1_A 3-deoxy-7-phosphoheptul 88.8 2.6 9E-05 36.2 9.5 59 64-124 114-172 (276)
447 2qkf_A 3-deoxy-D-manno-octulos 88.7 2.9 9.8E-05 36.0 9.8 51 74-124 106-156 (280)
448 2bw0_A 10-FTHFDH, 10-formyltet 88.4 0.6 2E-05 41.4 5.4 72 1-80 21-106 (329)
449 2bma_A Glutamate dehydrogenase 88.3 4.4 0.00015 37.5 11.2 117 3-136 253-390 (470)
450 1vli_A Spore coat polysacchari 88.3 3.1 0.0001 37.5 9.9 57 67-124 128-184 (385)
451 2ywr_A Phosphoribosylglycinami 88.2 0.63 2.1E-05 38.6 5.1 74 3-82 2-89 (216)
452 1e3j_A NADP(H)-dependent ketos 88.2 0.99 3.4E-05 40.3 6.9 129 4-158 171-313 (352)
453 1vr6_A Phospho-2-dehydro-3-deo 88.1 4.6 0.00016 35.9 10.9 59 64-124 182-240 (350)
454 5mdh_A Malate dehydrogenase; o 87.8 0.34 1.2E-05 43.1 3.5 76 2-81 3-87 (333)
455 2b2c_A Spermidine synthase; be 87.8 2.7 9.3E-05 36.9 9.3 130 3-160 110-248 (314)
456 3dr5_A Putative O-methyltransf 87.8 2.6 8.8E-05 34.8 8.7 74 4-82 59-138 (221)
457 4g65_A TRK system potassium up 87.6 1.1 3.9E-05 41.7 7.0 131 4-162 237-374 (461)
458 1xj5_A Spermidine synthase 1; 87.6 3.5 0.00012 36.5 10.0 74 3-82 122-203 (334)
459 1h2b_A Alcohol dehydrogenase; 87.5 0.93 3.2E-05 40.6 6.2 90 4-103 189-285 (359)
460 1zco_A 2-dehydro-3-deoxyphosph 87.5 2.6 9E-05 35.9 8.7 59 64-124 99-157 (262)
461 1mjf_A Spermidine synthase; sp 87.4 9.7 0.00033 32.6 12.5 73 3-83 77-162 (281)
462 3adn_A Spermidine synthase; am 87.3 6.2 0.00021 34.2 11.2 74 3-82 85-166 (294)
463 2gpy_A O-methyltransferase; st 87.3 2.1 7.1E-05 35.4 8.0 74 3-83 56-136 (233)
464 3hnr_A Probable methyltransfer 87.0 1.5 5.2E-05 35.8 6.9 137 3-156 47-192 (220)
465 2pt6_A Spermidine synthase; tr 87.0 4.5 0.00015 35.6 10.2 74 3-82 118-198 (321)
466 3tr6_A O-methyltransferase; ce 86.9 2.2 7.7E-05 34.9 7.9 75 3-82 66-149 (225)
467 3lp8_A Phosphoribosylamine-gly 86.9 0.55 1.9E-05 43.6 4.4 141 1-163 20-165 (442)
468 3k6r_A Putative transferase PH 86.9 1.7 5.8E-05 37.5 7.2 87 4-97 128-218 (278)
469 2avd_A Catechol-O-methyltransf 86.7 2.2 7.4E-05 35.1 7.7 75 3-82 71-154 (229)
470 3dhn_A NAD-dependent epimerase 86.6 0.25 8.5E-06 40.9 1.8 93 3-123 5-102 (227)
471 3two_A Mannitol dehydrogenase; 86.5 0.5 1.7E-05 42.2 3.8 128 4-159 179-312 (348)
472 1pjq_A CYSG, siroheme synthase 86.5 1.3 4.4E-05 41.2 6.7 85 3-100 13-100 (457)
473 3on5_A BH1974 protein; structu 86.4 0.81 2.8E-05 41.0 5.0 83 3-96 200-286 (362)
474 1tmy_A CHEY protein, TMY; chem 86.2 3.1 0.0001 29.8 7.6 108 1-118 1-116 (120)
475 3tfw_A Putative O-methyltransf 86.2 3.4 0.00012 34.6 8.8 75 3-82 65-145 (248)
476 3duw_A OMT, O-methyltransferas 86.1 2.9 9.8E-05 34.2 8.2 74 3-82 60-142 (223)
477 1qv9_A F420-dependent methylen 86.1 3.6 0.00012 34.0 8.2 92 1-108 2-104 (283)
478 1inl_A Spermidine synthase; be 86.1 4.1 0.00014 35.3 9.5 75 3-83 92-173 (296)
479 1l3i_A Precorrin-6Y methyltran 85.7 4.5 0.00016 31.7 9.0 72 3-82 35-109 (192)
480 3c3y_A Pfomt, O-methyltransfer 85.7 3 0.0001 34.7 8.1 74 3-81 72-155 (237)
481 3qvo_A NMRA family protein; st 85.6 0.3 1E-05 40.8 1.8 70 3-83 24-98 (236)
482 1iy9_A Spermidine synthase; ro 85.6 4 0.00014 34.9 9.0 75 3-83 77-158 (275)
483 3cbg_A O-methyltransferase; cy 85.6 2.6 8.7E-05 35.0 7.6 75 3-82 74-157 (232)
484 3ntv_A MW1564 protein; rossman 85.4 3.2 0.00011 34.4 8.1 73 3-82 73-151 (232)
485 3t8y_A CHEB, chemotaxis respon 85.4 6 0.00021 30.4 9.3 101 3-108 26-133 (164)
486 3lcc_A Putative methyl chlorid 85.3 3.5 0.00012 34.0 8.4 70 4-81 69-140 (235)
487 3g8r_A Probable spore coat pol 85.2 5.9 0.0002 35.2 9.9 56 67-123 105-160 (350)
488 3fpc_A NADP-dependent alcohol 85.1 0.59 2E-05 41.8 3.6 89 4-102 169-265 (352)
489 3aog_A Glutamate dehydrogenase 85.1 1.9 6.4E-05 39.7 6.9 102 3-118 236-353 (440)
490 3auf_A Glycinamide ribonucleot 85.1 1.2 4.1E-05 37.2 5.2 76 3-84 23-112 (229)
491 1sui_A Caffeoyl-COA O-methyltr 85.0 3.8 0.00013 34.4 8.5 74 3-81 81-164 (247)
492 1rjw_A ADH-HT, alcohol dehydro 85.0 1.3 4.3E-05 39.3 5.7 89 4-102 167-260 (339)
493 2nxc_A L11 mtase, ribosomal pr 84.9 4.2 0.00014 34.3 8.7 71 3-81 122-192 (254)
494 2qk4_A Trifunctional purine bi 84.8 0.83 2.8E-05 42.4 4.5 143 1-162 23-170 (452)
495 4gek_A TRNA (CMO5U34)-methyltr 84.6 4.2 0.00014 34.5 8.6 110 4-118 73-193 (261)
496 1p0f_A NADP-dependent alcohol 84.5 1.1 3.9E-05 40.2 5.2 89 4-102 194-292 (373)
497 1bgv_A Glutamate dehydrogenase 84.3 5.9 0.0002 36.5 9.8 108 3-116 231-357 (449)
498 1pl8_A Human sorbitol dehydrog 84.3 1.6 5.3E-05 39.0 6.0 129 4-158 174-315 (356)
499 2d8a_A PH0655, probable L-thre 84.3 0.94 3.2E-05 40.4 4.5 130 4-157 170-311 (348)
500 2wqp_A Polysialic acid capsule 84.3 3.3 0.00011 36.8 7.9 56 67-123 118-173 (349)
No 1
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=100.00 E-value=1.4e-61 Score=446.05 Aligned_cols=320 Identities=19% Similarity=0.255 Sum_probs=261.7
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
|||||||||.||+.+|++.+...++ ++|+||||+++++++++++ ++ +++..| +|++|||+++++|+|+|+||
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~-~~lvav~d~~~~~a~~~a~---~~--g~~~~y--~d~~ell~~~~iDaV~I~tP 95 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAEN-CVVTAIASRDLTRAREMAD---RF--SVPHAF--GSYEEMLASDVIDAVYIPLP 95 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSS-EEEEEEECSSHHHHHHHHH---HH--TCSEEE--SSHHHHHHCSSCSEEEECSC
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCC-eEEEEEECCCHHHHHHHHH---Hc--CCCeee--CCHHHHhcCCCCCEEEEeCC
Confidence 6999999999998767999998887 9999999999999999987 45 665555 99999999999999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH--hCCeeE
Q 018445 83 GQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--IGDMMS 160 (355)
Q Consensus 83 ~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--iG~i~~ 160 (355)
+..|++++++||++|||||||||++.|++|+++|++++++ +|++++|++++||+|.++++|++|++ ||+|+.
T Consensus 96 ~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~------~~~~l~v~~~~R~~p~~~~~k~~i~~G~iG~i~~ 169 (350)
T 4had_A 96 TSQHIEWSIKAADAGKHVVCEKPLALKAGDIDAVIAARDR------NKVVVTEAYMITYSPVWQKVRSLIDEGAIGSLRH 169 (350)
T ss_dssp GGGHHHHHHHHHHTTCEEEECSCCCSSGGGGHHHHHHHHH------HTCCEEECCGGGGSHHHHHHHHHHHTTTTSSEEE
T ss_pred CchhHHHHHHHHhcCCEEEEeCCcccchhhHHHHHHHHHH------cCCceeEeeeeecCHHHHHhhHhhhcCCCCccee
Confidence 9999999999999999999999999999999999999999 49999999999999999999999997 999999
Q ss_pred EEEEEeeccCCCCCccCccccc--cccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCceEEEEEEecCCc
Q 018445 161 VQVIVEGSMNSSNPYFSSSWRR--NFTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISSNFQLENGC 238 (355)
Q Consensus 161 v~~~~~~~~~~~~~~~~~~w~~--~~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~G~ 238 (355)
+++.+..+.... .+|+. ..+||+|+|+|+|.+|+++|++|.+|++|++...... ..+.+|.+.++++|+||.
T Consensus 170 i~~~~~~~~~~~-----~~~~~~~~~gGG~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~-~~~~d~~~~~~l~~~~g~ 243 (350)
T 4had_A 170 VQGAFTYFNRDA-----SNMRNIPELGGGGLPDIGVYPVMSTRFSTGKEPLRIQANTERDP-DFGTDIYSSVKADFDDFE 243 (350)
T ss_dssp EEEEEEEECCCC-----------------CCHHHHHHHHHHHHHHHCCCCSEEEEEEEECT-TTCCEEEEEEEEECSSCE
T ss_pred eeEEEeeccccc-----ccccCChhhcCCcccCCceehhHHHHHHcCCCceEEEEEEEEcC-CCCceEEEEEEEEECCEE
Confidence 999876433221 23333 3789999999999999999999988999999876533 345788999999999997
Q ss_pred EEEEEEEEecCCCCeEEEEEeeeeEEEEecCCCCC-CCceeEEEeCCCCcce--eeecCCCChHHHHHHHHHHHHHhhcC
Q 018445 239 SGVFVMVVSSRSPKIFWRVVGMKGTLQVERGNQDG-RHGYLVTQYGADGQSK--SMFYPFSGVTEELKAFIHDISEAKKG 315 (355)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~f~~~i~~~~~~ 315 (355)
.+.+...+.. ....++|+|++|++.++...... .....+.......... ......++|..++++|+++|+++.
T Consensus 244 ~~~~~~~~~~--~~~~~~i~G~~G~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~i~~g~-- 319 (350)
T 4had_A 244 LSFYVSTQMA--NRQIMVFHGTNGYIEVKSPFNANRWGPEEIELADRSHNESRIFRFQDSRQYRREVEAFARAVENGK-- 319 (350)
T ss_dssp EEEEEESEEE--EEEEEEEEESSCEEEESSTTTGGGTSCCEEEEECSSSSEEEEEECTTCCHHHHHHHHHHHHHHHSC--
T ss_pred EEEEEecCCC--CCcccccccCceEEEEccccccccCCcceEEEecCCCCceeEeecCCChHHHHHHHHHHHHHHcCC--
Confidence 6654433332 24678999999999998754321 1122344433333222 223345689999999999999998
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHchhcCCcEEec
Q 018445 316 INHVPEPRSSFLEGARDVALLEAMLESGSKQGALVHV 352 (355)
Q Consensus 316 ~~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~v~~ 352 (355)
++.++++|+++++++++|+++| +++|+||.|
T Consensus 320 -----~~~~~~~dal~~~~iieai~~S-a~~g~wv~V 350 (350)
T 4had_A 320 -----EEVVTLENSKLNQKVIDAIYRA-SEKDGWEAV 350 (350)
T ss_dssp -----SCCCCHHHHHHHHHHHHHHHHH-TTSSSCEEC
T ss_pred -----CCCCCHHHHHHHHHHHHHHHHH-HHhCCCcCC
Confidence 8899999999999999999999 599999976
No 2
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=100.00 E-value=4.3e-61 Score=449.25 Aligned_cols=331 Identities=23% Similarity=0.290 Sum_probs=269.5
Q ss_pred CC-ceEEEEecccccchhccchhhhcCC------eEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCC
Q 018445 1 MA-PRIAILGAGIFVKTQYIPRLAEISD------LVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDS 73 (355)
Q Consensus 1 m~-~rigiiG~G~~~~~~~~~~l~~~~~------~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~ 73 (355)
|+ +||||||+|.||.. |++++..++. .++|+||||+++++++++++ ++ +++..| +|+++||++++
T Consensus 4 M~klrvgiIG~G~ig~~-h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~---~~--g~~~~~--~d~~~ll~~~~ 75 (390)
T 4h3v_A 4 MTNLGIGLIGYAFMGAA-HSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAG---KL--GWSTTE--TDWRTLLERDD 75 (390)
T ss_dssp CCEEEEEEECHHHHHHH-HHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHH---HH--TCSEEE--SCHHHHTTCTT
T ss_pred CCcCcEEEEcCCHHHHH-HHHHHHhCccccccccCceEEEEEcCCHHHHHHHHH---Hc--CCCccc--CCHHHHhcCCC
Confidence 65 89999999999986 9998886542 46999999999999999987 44 555555 99999999999
Q ss_pred ccEEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHH---hhccCCCCCCCCeEEEEecccCchHHHHHHH
Q 018445 74 ILGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSR---YNSICPDPPGQPIWAVAENYRFEPAFVECKK 150 (355)
Q Consensus 74 ~D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~---a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~ 150 (355)
+|+|+|+||+..|++++++||++|||||||||++.|++|+++|+++ +++ +|++++|++++||+|.++++|+
T Consensus 76 iDaV~I~tP~~~H~~~~~~al~aGkhVl~EKPla~t~~ea~~l~~~~~~~~~------~g~~~~v~~~~R~~p~~~~~k~ 149 (390)
T 4h3v_A 76 VQLVDVCTPGDSHAEIAIAALEAGKHVLCEKPLANTVAEAEAMAAAAAKAAA------GGIRSMVGFTYRRVPAIALARK 149 (390)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHHH------TTCCEEEECGGGGSHHHHHHHH
T ss_pred CCEEEEeCChHHHHHHHHHHHHcCCCceeecCcccchhHHHHHHHHHHHHHh------cCCceEEEeeeccCchHHHHHH
Confidence 9999999999999999999999999999999999999999999666 666 4999999999999999999999
Q ss_pred HHHH--hCCeeEEEEEEeeccCCCCCccCcccccc---ccCccccchhhHHHHHHHHHhCCcceeEEEeecccCC-----
Q 018445 151 LIAE--IGDMMSVQVIVEGSMNSSNPYFSSSWRRN---FTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDK----- 220 (355)
Q Consensus 151 ~i~~--iG~i~~v~~~~~~~~~~~~~~~~~~w~~~---~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~----- 220 (355)
+|++ ||+|+++++.+..++.. .+....+|+.+ .|||+|+|+|+|.+|+++||+|.+|++|+|......+
T Consensus 150 ~i~~g~iG~i~~v~~~~~~~~~~-~~~~~~~wr~~~~~~GgG~l~d~g~H~iD~~~~l~G~~~~~V~a~~~~~~~~~~~~ 228 (390)
T 4h3v_A 150 LVADGKIGTVRHVRAQYLQDWIA-DPEAPLSWRLDKDKAGSGALGDIGAHIVDLTQFITGDRIAEVSGRLETFVKERPKP 228 (390)
T ss_dssp HHHTTSSCSEEEEEEEEECCTTC-STTSCCCGGGCHHHHSCSHHHHTHHHHHHHHHHHHSCCEEEEEEEEECSCCEEECT
T ss_pred HHHcCCCCcceeeEEEEeeeccC-CCCCCccccccccccCCcchhhhHHHHHHHHHHHhCCCceEEEEEEEeecccCCcc
Confidence 9997 99999999988654332 23344678875 5889999999999999999999889999998754321
Q ss_pred ---------------CCCCCceEEEEEEecCCcEEEEEEEEecCCCC--eEEEEEeeeeEEEEecCCCCC----------
Q 018445 221 ---------------TLPPPDNISSNFQLENGCSGVFVMVVSSRSPK--IFWRVVGMKGTLQVERGNQDG---------- 273 (355)
Q Consensus 221 ---------------~~~~~d~~~~~l~~~~G~~~~~~~~~~~~~~~--~~~~i~G~~G~i~~~~~~~~~---------- 273 (355)
..+.+|.+.++++|++|.++++..++..+... .+++|+|++|++.++......
T Consensus 229 ~~~~~~~~~~~~~~~~~~vdd~~~~~~~~~~G~~~~~~~s~~~~~~~~~~~~~i~G~~G~l~~~~~~~~~~~~~~~~~~~ 308 (390)
T 4h3v_A 229 EAHSGLSGTASAERGPVTVDDAAVFLATFRGGALGVFEATRFATGRKNAIRIEINGSKGSLAFDFEDMNLLHFYDATEDP 308 (390)
T ss_dssp TCCCCC--CCGGGEEECCSCSEEEEEEEETTSCEEEEEEESCCTTCSSEEEEEEEESSEEEEEEGGGTTEEEEEETTSCT
T ss_pred cccccccccccccccccccccceeeEEecCCCcEEeeeeeccccCCCCcceeEEEcceEEEEEecCCCceEEEecCCCCc
Confidence 12468999999999999999999998775443 578999999999998643210
Q ss_pred -CCceeEEEeCCCC-cceeee-------cCCCChHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHchh
Q 018445 274 -RHGYLVTQYGADG-QSKSMF-------YPFSGVTEELKAFIHDISEAKKGINHVPEPRSSFLEGARDVALLEAMLESGS 344 (355)
Q Consensus 274 -~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~ 344 (355)
.....-....... ...... ...++|..++++|+++|+++. ++.++++|+++++++++|+++| +
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ai~~g~-------~~~~~~~dal~~~~i~~A~~~S-a 380 (390)
T 4h3v_A 309 ETAGFRRILATEPVHPYVAGWWPPGHLLGYEHGFTHQVVDLVTAIAEGK-------DPEPSFADGLQVQRVLAAVETS-S 380 (390)
T ss_dssp TTCCEEEEESCSTTSTTGGGSCCTTCCCCTTHHHHHHHHHHHHHHHHTC-------CCSSCHHHHHHHHHHHHHHHHH-H
T ss_pred cccccccccccCccccccccccCCCcccchhHHHHHHHHHHHHHHHcCC-------CCCCCHHHHHHHHHHHHHHHHH-H
Confidence 0001110000000 000000 012357889999999999998 8899999999999999999999 6
Q ss_pred cCCcEEeccC
Q 018445 345 KQGALVHVKK 354 (355)
Q Consensus 345 ~~g~~v~~~~ 354 (355)
++|+||+|++
T Consensus 381 ~~g~~V~vpe 390 (390)
T 4h3v_A 381 TSRQWQEIPE 390 (390)
T ss_dssp HHTBCEECCC
T ss_pred hCCCCeECcC
Confidence 9999999986
No 3
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=100.00 E-value=2.2e-60 Score=447.00 Aligned_cols=329 Identities=20% Similarity=0.286 Sum_probs=268.6
Q ss_pred CceEEEEecccccchhccchhhhcC-------CeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCc
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEIS-------DLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSI 74 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~-------~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~ 74 (355)
+|||||||+|.||+. |++++.+++ ++++|+||||+++++++++++ ++ +++..| +|+++||+++++
T Consensus 26 klrvgiIG~G~ig~~-h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~---~~--~~~~~y--~d~~~ll~~~~v 97 (412)
T 4gqa_A 26 RLNIGLIGSGFMGQA-HADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAA---KL--GAEKAY--GDWRELVNDPQV 97 (412)
T ss_dssp EEEEEEECCSHHHHH-HHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHH---HH--TCSEEE--SSHHHHHHCTTC
T ss_pred cceEEEEcCcHHHHH-HHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHH---Hc--CCCeEE--CCHHHHhcCCCC
Confidence 489999999999986 999998642 458999999999999999987 44 555555 999999999999
Q ss_pred cEEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH
Q 018445 75 LGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE 154 (355)
Q Consensus 75 D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~ 154 (355)
|+|+|+||+..|++++++||++|||||||||++.|++|+++|++++++ +|++++|++++||+|.++++|++|++
T Consensus 98 D~V~I~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~------~g~~~~v~~~~R~~p~~~~~k~~i~~ 171 (412)
T 4gqa_A 98 DVVDITSPNHLHYTMAMAAIAAGKHVYCEKPLAVNEQQAQEMAQAARR------AGVKTMVAFNNIKTPAALLAKQIIAR 171 (412)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHH------HTCCEEEECGGGTSHHHHHHHHHHHH
T ss_pred CEEEECCCcHHHHHHHHHHHHcCCCeEeecCCcCCHHHHHHHHHHHHH------hCCeeeeccceecCHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999 49999999999999999999999997
Q ss_pred --hCCeeEEEEEEeeccCCCCCccCcccccc---ccCccccchhhHHHHHHHHHhCCcceeEEEeecccCC---------
Q 018445 155 --IGDMMSVQVIVEGSMNSSNPYFSSSWRRN---FTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDK--------- 220 (355)
Q Consensus 155 --iG~i~~v~~~~~~~~~~~~~~~~~~w~~~---~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~--------- 220 (355)
||+|+.+++.+..++.. .+..+.+|+.+ .|||+|+|+|+|.+|+++||+| +|++|++.......
T Consensus 172 G~iG~i~~~~~~~~~~~~~-~~~~~~~wr~~~~~~GgG~l~d~g~H~iD~~~~l~G-~~~~V~a~~~~~~~~r~~~~~~~ 249 (412)
T 4gqa_A 172 GDIGEPVRFRGTFDQGFYN-DPNLPWSWRCSKTLGGSGALGDLGAHTLSVAQFLLG-GIREVTASAQTCLRQRPVPQRDA 249 (412)
T ss_dssp TTTCSEEEEEEEEECCSTT-STTSCCCGGGCTTTTCCSHHHHTHHHHHHHHHHHHC-CEEEEEEEEECCSCEEECC----
T ss_pred CCcCCeEEEEEEecccccc-CCCCCccceeccccCCCcchhhhhhhHHHHHHHHhC-CCeEEEEEEEecccccccccccc
Confidence 99999999988654332 23345678765 5789999999999999999999 89999997754321
Q ss_pred -------------CCCCCceEEEEEEecCCcEEEEEEEEecCCCC--eEEEEEeeeeEEEEecCCCCC--------C---
Q 018445 221 -------------TLPPPDNISSNFQLENGCSGVFVMVVSSRSPK--IFWRVVGMKGTLQVERGNQDG--------R--- 274 (355)
Q Consensus 221 -------------~~~~~d~~~~~l~~~~G~~~~~~~~~~~~~~~--~~~~i~G~~G~i~~~~~~~~~--------~--- 274 (355)
..+.+|++.++++|+||.+++++.+|..+... .+++|+|++|++.++...... .
T Consensus 250 ~~~~~~~~~~~~~~~~~eD~~~~~l~f~~G~~~~~~~s~~~~~~~~~~~~~i~Gt~G~l~~~~~~~~~l~~~~~~~~~~~ 329 (412)
T 4gqa_A 250 GYASRVAADAEWREVENDDQVQCLVNFDSGAAGVIEASRIAAGRIFGVFWEVSGTEGTLYMDGERFNELQVYRFNDDKHD 329 (412)
T ss_dssp --------CCCEEECCSCSEEEEEEEETTSCEEEEEEESCCTTCSSEEEEEEEETTEEEEEEGGGTTEEEEEETTSCGGG
T ss_pred cccccccccccccccccceEEEEEEEeCCCcEEEEEEEeeecCCCCceEEEEEeCeEEEEEeccCCceEEEEecCCCccc
Confidence 12568999999999999999999999876543 578999999999998643210 0
Q ss_pred CceeEEEeCCCCcceeeecC----------CCChHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHchh
Q 018445 275 HGYLVTQYGADGQSKSMFYP----------FSGVTEELKAFIHDISEAKKGINHVPEPRSSFLEGARDVALLEAMLESGS 344 (355)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~ 344 (355)
.+.................. .+.|..++++|+++|+++. ++.++++|+++++++++|+++| +
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~f~~ai~~g~-------~~~~~~~dal~~~~v~~Ai~~S-a 401 (412)
T 4gqa_A 330 RGFKTLYAGSQIPAYAGFFGFDFGGGGLGYFDVKVIEVHDLVQGICGDD-------DCYPNFEFGLQNQRVLSAIEAS-M 401 (412)
T ss_dssp CCEEEEECBTTSGGGGGTCCCSSCBCCCCHHHHHHHHHHHHHHHHSSSS-------CCSSCHHHHHHHHHHHHHHHHH-H
T ss_pred cceeeeccCCcCCcccccccccCcccccchhhHHHHHHHHHHHHHhCCC-------CCCCCHHHHHHHHHHHHHHHHH-H
Confidence 00000000000000000000 1235678999999999987 8889999999999999999999 6
Q ss_pred cCCcEEeccC
Q 018445 345 KQGALVHVKK 354 (355)
Q Consensus 345 ~~g~~v~~~~ 354 (355)
++|+||.|++
T Consensus 402 ~~g~~V~v~~ 411 (412)
T 4gqa_A 402 VSRRWVNVVK 411 (412)
T ss_dssp HHCSCEECCC
T ss_pred HcCCceECCC
Confidence 9999999975
No 4
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=100.00 E-value=1.8e-58 Score=432.03 Aligned_cols=328 Identities=20% Similarity=0.238 Sum_probs=261.4
Q ss_pred CceEEEEecccccchhccchhhhcC------CeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCcc
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEIS------DLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSIL 75 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~------~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D 75 (355)
++||||||+|.||+. |++++..++ ++++|+||||+++++++++++ ++ +++..| +|++|||+++++|
T Consensus 25 kirvgiIG~G~ig~~-H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~---~~--g~~~~y--~d~~ell~~~~iD 96 (393)
T 4fb5_A 25 PLGIGLIGTGYMGKC-HALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAG---EF--GFEKAT--ADWRALIADPEVD 96 (393)
T ss_dssp CCEEEEECCSHHHHH-HHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHH---HH--TCSEEE--SCHHHHHHCTTCC
T ss_pred CccEEEEcCCHHHHH-HHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHH---Hh--CCCeec--CCHHHHhcCCCCc
Confidence 489999999999986 888876532 248999999999999999987 44 555555 9999999999999
Q ss_pred EEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH-
Q 018445 76 GVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE- 154 (355)
Q Consensus 76 ~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~- 154 (355)
+|+||||+..|++++++||++|||||||||++.|++|+++|++++++ +|++++|++++||+|.++++|++|++
T Consensus 97 aV~IatP~~~H~~~a~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~------~g~~l~vg~~~R~~p~~~~~k~~i~~G 170 (393)
T 4fb5_A 97 VVSVTTPNQFHAEMAIAALEAGKHVWCEKPMAPAYADAERMLATAER------SGKVAALGYNYIQNPVMRHIRKLVGDG 170 (393)
T ss_dssp EEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHH------SSSCEEECCGGGGCHHHHHHHHHHHTT
T ss_pred EEEECCChHHHHHHHHHHHhcCCeEEEccCCcccHHHHHHhhhhHHh------cCCccccccccccChHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999 59999999999999999999999997
Q ss_pred -hCCeeEEEEEEeeccCCCCCccCccccc--cccCccccchhhHHHHHHHHHhCCcceeEEEeecccCC----------C
Q 018445 155 -IGDMMSVQVIVEGSMNSSNPYFSSSWRR--NFTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDK----------T 221 (355)
Q Consensus 155 -iG~i~~v~~~~~~~~~~~~~~~~~~w~~--~~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~----------~ 221 (355)
||+|..+++.+..++..... ....|+. ..+||+|+|+|+|.+|+++||+| +|.+|.+......+ .
T Consensus 171 ~iG~i~~v~~~~~~~~~~~~~-~~~~~~~~~~~ggG~l~d~g~H~iD~~~~l~G-~~~~v~a~~~~~~~~~~~~~~~~~~ 248 (393)
T 4fb5_A 171 VIGRVNHVRVEMDEDFMADPD-IFFYWKSELSAGYGALDDFAVHPLSLLWYLFG-HVEAVITDMVKPYPDRPLSEGGRRA 248 (393)
T ss_dssp TTCSEEEEEEEEECCTTTCTT-SCCCGGGCGGGCCBHHHHTTHHHHHHHHHHTC-CEEEEEEEEECCCSEEECTTSSEEE
T ss_pred CCccccceeeeeccccCCCcc-ccccccccccCCCceecceeeehHHHHHHhcC-CCeEEEEEeeecccCcccccCCccc
Confidence 99999999988755433222 2234443 37899999999999999999999 78999886654321 1
Q ss_pred CCCCceEEEEEEecCCcEEEEEEEEecCCCC--eEEEEEeeeeEEEEecCCCCCC-----------CceeEEEeCCCCcc
Q 018445 222 LPPPDNISSNFQLENGCSGVFVMVVSSRSPK--IFWRVVGMKGTLQVERGNQDGR-----------HGYLVTQYGADGQS 288 (355)
Q Consensus 222 ~~~~d~~~~~l~~~~G~~~~~~~~~~~~~~~--~~~~i~G~~G~i~~~~~~~~~~-----------~~~~~~~~~~~~~~ 288 (355)
.+.+|...+.++|++|..+++..++...... .+++|+|++|++.++....... .+............
T Consensus 249 ~~~~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~i~G~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (393)
T 4fb5_A 249 VENHDAANVLMRLDGGISAVLMANRAAWGRKGRIALQIYGSKGSILYDQERMNEFELYQAEGPGSEQGFRKILAAPAHRP 328 (393)
T ss_dssp CCSBSEEEEEEEEGGGCEEEEEEESCCTTCSSEEEEEEEESSEEEEEEGGGTTEEEEEESCSCGGGCCCEEEECCTTSTT
T ss_pred ccccccceeeeecCCCeEEEEEEEeeeccCCCceEEEEEeeeeEEEeccCCcceEEEeccCCCcccccceeecccccccc
Confidence 2456789999999999999999998875543 6889999999999886543100 00000000000000
Q ss_pred eeeec--------CCCChHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHchhcCCcEEecc
Q 018445 289 KSMFY--------PFSGVTEELKAFIHDISEAKKGINHVPEPRSSFLEGARDVALLEAMLESGSKQGALVHVK 353 (355)
Q Consensus 289 ~~~~~--------~~~~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~v~~~ 353 (355)
..... ..+.|..++++|+++|+++. ++.++++|+++++++++|+++| +++|++|+|.
T Consensus 329 ~~~~~~~~~~~~g~~~~~~~e~~~f~~~i~~~~-------~~~~~~~d~l~~~~i~~A~~~S-a~~gr~V~lG 393 (393)
T 4fb5_A 329 YDRFIPAPGHGLGFNDLKIIECRELIRAITGEP-------SSIVTFKDGLRIEKSVHAMAQS-FHERRWIEIG 393 (393)
T ss_dssp HHHHCSSTTSCCCTTHHHHHHHHHHHHHHHCSC-------CCCCBHHHHHHHHHHHHHHHHH-HHTTSCEEC-
T ss_pred cccccccCCcccchhHHHHHHHHHHHHHHhCCC-------CCCCCHHHHHHHHHHHHHHHHH-HHcCCEEeCC
Confidence 00000 11346788999999999987 8899999999999999999999 6999999873
No 5
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=100.00 E-value=1.5e-57 Score=416.71 Aligned_cols=317 Identities=26% Similarity=0.432 Sum_probs=270.4
Q ss_pred CceEEEEecc-cccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEe
Q 018445 2 APRIAILGAG-IFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 2 ~~rigiiG~G-~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
++||||||+| .+|.. |++.+.+.+++++|++|||+++++++++++ ++ ++...| +|+++||+++++|+|+|+
T Consensus 18 ~irvgiIG~G~~~g~~-~~~~l~~~~~~~~lvav~d~~~~~~~~~a~---~~--~~~~~~--~~~~~ll~~~~vD~V~i~ 89 (340)
T 1zh8_A 18 KIRLGIVGCGIAAREL-HLPALKNLSHLFEITAVTSRTRSHAEEFAK---MV--GNPAVF--DSYEELLESGLVDAVDLT 89 (340)
T ss_dssp CEEEEEECCSHHHHHT-HHHHHHTTTTTEEEEEEECSSHHHHHHHHH---HH--SSCEEE--SCHHHHHHSSCCSEEEEC
T ss_pred ceeEEEEecCHHHHHH-HHHHHHhCCCceEEEEEEcCCHHHHHHHHH---Hh--CCCccc--CCHHHHhcCCCCCEEEEe
Confidence 5899999999 78875 999999883349999999999999999887 34 443444 899999999999999999
Q ss_pred cCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH--hCCe
Q 018445 81 LAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--IGDM 158 (355)
Q Consensus 81 tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--iG~i 158 (355)
||+..|++++++||++|||||||||++.|++|+++|++++++ +|+.+++++++||.|.++++|++|++ ||+|
T Consensus 90 tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~------~g~~~~v~~~~R~~p~~~~~k~~i~~g~iG~i 163 (340)
T 1zh8_A 90 LPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEK------SEKTVYIAENFRHVPAFWKAKELVESGAIGDP 163 (340)
T ss_dssp CCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHH------CSSCEEEECGGGGCHHHHHHHHHHHTTTTSSE
T ss_pred CCchHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHH------cCCeEEEEecccCCHHHHHHHHHHhcCCCCCc
Confidence 999999999999999999999999999999999999999999 59999999999999999999999986 9999
Q ss_pred eEEEEEEeeccCCCCCccCcccccc--ccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCceEEEEEEecC
Q 018445 159 MSVQVIVEGSMNSSNPYFSSSWRRN--FTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISSNFQLEN 236 (355)
Q Consensus 159 ~~v~~~~~~~~~~~~~~~~~~w~~~--~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~ 236 (355)
..+++.+..++....++...+|+.+ .+||.++|+|+|.+|+++|++| +|++|++......+..+.+|++.++++|+|
T Consensus 164 ~~v~~~~~~~~~~~~~~~~~~w~~~~~~~GG~l~d~g~H~ld~~~~l~G-~~~~V~a~~~~~~~~~~~~D~~~~~l~~~~ 242 (340)
T 1zh8_A 164 VFMNWQIWVGMDENNKYVHTDWRKKPKHVGGFLSDGGVHHAAAMRLILG-EIEWISAVAKDLSPLLGGMDFLSSIFEFEN 242 (340)
T ss_dssp EEEEEEEEBCCCTTCSGGGCHHHHTTCSTTTHHHHHHHHHHHHHHHHHC-CEEEEEEEEECCCTTSSSCCEEEEEEEETT
T ss_pred EEEEEEEeccccccCCCCCcCceECCcCCCceeeeccHHHHHHHHHhhC-CCeEEEEEEEccCCCCCCcceEEEEEEeCC
Confidence 9999987665554445555678765 6889999999999999999999 999999988765544567899999999999
Q ss_pred CcEEEEEEEEecCCCCeEEEEEeeeeEEEEecCCCCCCCceeEEEeCCCCcceeeecCCCChHHHHHHHHHHHHHhhcCC
Q 018445 237 GCSGVFVMVVSSRSPKIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGADGQSKSMFYPFSGVTEELKAFIHDISEAKKGI 316 (355)
Q Consensus 237 G~~~~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~~~~~~ 316 (355)
|..+++..+|..+... +++|+|++|++.+.... ... .. ........++|..++++|+++|+++.
T Consensus 243 G~~~~~~~s~~~~~~~-~~~i~G~~G~i~~~~~~--------~~~---~~-~~~~~~~~~~~~~~~~~f~~~i~~g~--- 306 (340)
T 1zh8_A 243 GTVGNYTISYSLKGNE-RFEITGTKGKISISWDK--------IVL---NE-EEMKVPQENSYQKEFEDFYQVVAEGK--- 306 (340)
T ss_dssp SCEEEEEEESSSBCCC-EEEEEESSCEEEEETTE--------EEE---TT-EEEECCCCCHHHHHHHHHHHHHHSCC---
T ss_pred CCEEEEEEEeeecCCC-EEEEEeCcEEEEEEeCC--------ccc---cc-eeecCCCcccHHHHHHHHHHHHHhCC---
Confidence 9999999999887666 99999999999984311 000 01 11112223679999999999999865
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHchhcCCcEEeccCC
Q 018445 317 NHVPEPRSSFLEGARDVALLEAMLESGSKQGALVHVKKF 355 (355)
Q Consensus 317 ~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~v~~~~~ 355 (355)
+.+.+++++++.++++++++++| +|++|.++++
T Consensus 307 ---~~p~~~~~~~l~~~~i~~a~~~S---~g~~V~l~~~ 339 (340)
T 1zh8_A 307 ---PNDLGSPVQALKDLAFIEACVRS---AGNKVFVSSL 339 (340)
T ss_dssp ---CCSSSCHHHHHHHHHHHHHHHHH---TTSCEEGGGG
T ss_pred ---CCCCCCHHHHHHHHHHHHHHHHc---CCCEEeCccc
Confidence 24678999999999999999999 7999999864
No 6
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=100.00 E-value=2.8e-57 Score=417.61 Aligned_cols=326 Identities=15% Similarity=0.199 Sum_probs=272.8
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEe
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
|++||||||+|.||.. |++.+.++++ ++|+++||+++++++.+++ ++ +++. | +|+++|++++++|+|+|+
T Consensus 4 ~~~~vgiiG~G~~g~~-~~~~l~~~~~-~~lvav~d~~~~~~~~~~~---~~--g~~~-~--~~~~~~l~~~~~D~V~i~ 73 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYV-MADAYTKSEK-LKLVTCYSRTEDKREKFGK---RY--NCAG-D--ATMEALLAREDVEMVIIT 73 (354)
T ss_dssp CCEEEEEECCSHHHHH-HHHHHTTCSS-EEEEEEECSSHHHHHHHHH---HH--TCCC-C--SSHHHHHHCSSCCEEEEC
T ss_pred CcceEEEEccCHHHHH-HHHHHHhCCC-cEEEEEECCCHHHHHHHHH---Hc--CCCC-c--CCHHHHhcCCCCCEEEEe
Confidence 3579999999999985 9999998876 9999999999999999887 34 5543 3 899999999999999999
Q ss_pred cCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH--hCCe
Q 018445 81 LAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--IGDM 158 (355)
Q Consensus 81 tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--iG~i 158 (355)
||+..|++++++|+++||||+||||++.+++++++|.+++++ +|+.+++++++||+|.++++|++|++ ||+|
T Consensus 74 tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~------~~~~~~v~~~~R~~p~~~~~k~~i~~g~iG~i 147 (354)
T 3db2_A 74 VPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKE------TGVKFLCGHSSRRLGALRKMKEMIDTKEIGEV 147 (354)
T ss_dssp SCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHH------HCCCEEEECGGGGSHHHHHHHHHHHTTTTCCE
T ss_pred CChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHH------cCCeEEEeechhcCHHHHHHHHHHhcCCCCCe
Confidence 999999999999999999999999999999999999999999 49999999999999999999999996 9999
Q ss_pred eEEEEEEeeccCCCCCccCcccccc---ccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCceEEEEEEec
Q 018445 159 MSVQVIVEGSMNSSNPYFSSSWRRN---FTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISSNFQLE 235 (355)
Q Consensus 159 ~~v~~~~~~~~~~~~~~~~~~w~~~---~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~l~~~ 235 (355)
..+++.+..+ ....+...+|+.+ .+||.++|+|+|.+|+++|++| +|++|++.........+.+|++.++++|+
T Consensus 148 ~~v~~~~~~~--~~~~~~~~~w~~~~~~~ggG~l~d~g~H~ld~~~~l~G-~~~~V~a~~~~~~~~~~~~d~~~~~l~~~ 224 (354)
T 3db2_A 148 SSIEAVFSNE--RGLELKKGNWRGEPATAPGGPLTQLGVHQIDNLQFLLG-PVARVFNFGKPMYTEVENITVNQTLLEFE 224 (354)
T ss_dssp EEEEEEEECS--GGGTCCTTCGGGCTTTSTTTHHHHTHHHHHHHHHHHHC-CEEEEEEEEECCSCSSSSCCEEEEEEEET
T ss_pred EEEEEEEEec--cCcccccCCCccccccCCCceeccchhHHHHHHHHHhC-CCeEEEEEeeccCCCCCCCceEEEEEEEC
Confidence 9999987532 2223334568765 4788999999999999999999 69999998876654456899999999999
Q ss_pred CCcEEEEEEEEecCCCCeEEEEEeeeeEEEEecCCCC----CCCc-e--eEE--EeCC-----CCccee--eecCCCChH
Q 018445 236 NGCSGVFVMVVSSRSPKIFWRVVGMKGTLQVERGNQD----GRHG-Y--LVT--QYGA-----DGQSKS--MFYPFSGVT 299 (355)
Q Consensus 236 ~G~~~~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~----~~~~-~--~~~--~~~~-----~~~~~~--~~~~~~~~~ 299 (355)
||.++++..+|..+.. .+++|+|++|++.++..... .... . .+. .... ...... .....++|.
T Consensus 225 ~G~~~~~~~s~~~~~~-~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (354)
T 3db2_A 225 DGKQAYLGTNWACPGV-FSINVYGTKANLFYQLDFSWWSNSDVTDEHSTLIKREFASMSDDPDNRILRDVKVDFESVDHL 303 (354)
T ss_dssp TSCEEEEEEESSSSCE-EEEEEEESSEEEEEEECGGGTTSTTSGGGGEEEEEEEECC------CCCEEEEECCCCCCCHH
T ss_pred CCCEEEEEEEeccCCc-eEEEEEeccEEEEEeCCCcEEEEccCCCccccccccccccccCCCccCCCcccceeccccccc
Confidence 9999999999987655 89999999999999875410 0000 0 111 1000 000000 112346788
Q ss_pred H-HHHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHchhcCCcEEeccC
Q 018445 300 E-ELKAFIHDISEAKKGINHVPEPRSSFLEGARDVALLEAMLESGSKQGALVHVKK 354 (355)
Q Consensus 300 ~-~~~~f~~~i~~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~v~~~~ 354 (355)
. ++++|+++|+++. ++.++++|+++++++++|+++| +++|++|.+++
T Consensus 304 ~~~~~~f~~ai~~g~-------~~~~~~~d~~~~~~i~~a~~~S-a~~g~~V~l~e 351 (354)
T 3db2_A 304 RVEVEEVADVIRNGG-------ETEIGAEASLRNLAVVLAAVKS-VHEKRPVEIAE 351 (354)
T ss_dssp HHHHHHHHHHHHHCC-------CCSSCHHHHHHHHHHHHHHHHH-HHHTSCEEHHH
T ss_pred HHHHHHHHHHHhCCC-------CCCCCHHHHHHHHHHHHHHHHH-HhcCCceeHHH
Confidence 8 9999999999998 8899999999999999999999 68999999875
No 7
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=100.00 E-value=8.7e-57 Score=413.84 Aligned_cols=322 Identities=17% Similarity=0.205 Sum_probs=267.1
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
++||||||+|.+|...|++.+.++++ ++|++|||++++++++ .+++.. .| +|+++|++++++|+|+|+|
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~~-~~l~av~d~~~~~~~~-------~~~~~~-~~--~~~~~ll~~~~vD~V~i~t 75 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTPG-LELAGVSSSDASKVHA-------DWPAIP-VV--SDPQMLFNDPSIDLIVIPT 75 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTT-EEEEEEECSCHHHHHT-------TCSSCC-EE--SCHHHHHHCSSCCEEEECS
T ss_pred CceEEEECCCHHHHHHHHHHHhhCCC-cEEEEEECCCHHHHHh-------hCCCCc-eE--CCHHHHhcCCCCCEEEEeC
Confidence 48999999999998558999998877 9999999999998761 223443 33 8999999999999999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH--hCCee
Q 018445 82 AGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--IGDMM 159 (355)
Q Consensus 82 p~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--iG~i~ 159 (355)
|+..|++++++||++|||||||||++.+++|+++|++++++ +|+.+++++++||+|.++++|++|++ ||+|.
T Consensus 76 p~~~H~~~~~~al~aGkhV~~EKPla~~~~e~~~l~~~a~~------~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~ 149 (352)
T 3kux_A 76 PNDTHFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADD------AGLLLSVFHNRRWDSDFLTLKTLLAEGSLGNVV 149 (352)
T ss_dssp CTTTHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHH------TTCCEEECCGGGGCHHHHHHHHHHHHTTTCSEE
T ss_pred ChHHHHHHHHHHHHCCCcEEEECCCcCCHHHHHHHHHHHHH------cCCeEEEEeecccCHHHHHHHHHHhcCCCCceE
Confidence 99999999999999999999999999999999999999999 59999999999999999999999997 99999
Q ss_pred EEEEEEeeccCCCCCccCcccccc--ccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCceEEEEEEecCC
Q 018445 160 SVQVIVEGSMNSSNPYFSSSWRRN--FTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISSNFQLENG 237 (355)
Q Consensus 160 ~v~~~~~~~~~~~~~~~~~~w~~~--~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~G 237 (355)
.+++.+.... +....+|+.+ .+||.++|+|+|.+|+++||+| +|++|++......+..+.+|++.++++| +|
T Consensus 150 ~~~~~~~~~~----~~~~~~w~~~~~~ggG~l~d~g~H~id~~~~l~G-~p~~v~a~~~~~~~~~~~~d~~~~~l~~-~g 223 (352)
T 3kux_A 150 YFESHFDRYR----PEIRQRWREQAGAGGGIWYDLGPHLLDQALQLFG-LPETLNVDLGMLRPGSQSVDYFHAVLSY-PG 223 (352)
T ss_dssp EEEEEEECBC----CSSCSSCSCC---CBCHHHHHHHHHHHHHHHHHC-CCSEEEEEEECCSTTCCSBCEEEEEEEE-TT
T ss_pred EEEEEEeccC----CCCCcccccCCCCCCceeehhhhHHHHHHHHHhC-CCeEEEEEEEEecCCCCcccEEEEEEEE-CC
Confidence 9999875322 2223467764 7899999999999999999999 7999999887655556789999999999 88
Q ss_pred cEEEEEEEEecCCCCeEEEEEeeeeEEEEecCCC---------------CCCC--ceeEEEeCCCCcceeee-cCCCChH
Q 018445 238 CSGVFVMVVSSRSPKIFWRVVGMKGTLQVERGNQ---------------DGRH--GYLVTQYGADGQSKSMF-YPFSGVT 299 (355)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~---------------~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~ 299 (355)
..+++..++..+....+++|+|++|++.++.... .... ...+............. .....|.
T Consensus 224 ~~~~~~~s~~~~~~~~~~~i~G~~G~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (352)
T 3kux_A 224 QRVVLHSTVLAAAETARYIVHGTQGSYIKFGVDPQEDRLKAGERLPQADWGYDMRDGIVTLSHDNVLTEKPLLTLPGNYP 303 (352)
T ss_dssp EEEEEEEESBCCSCCCSEEEEESSEEEEECSCCSHHHHHHTTCCSCCTTTTCCCCCEEEEEESSSCEEEEEECCCCCCTH
T ss_pred EEEEEEEEeecCCCCCEEEEEeCCcEEEEeCCChhHHHHhcCCCCCCcccCcCCCCCeeEeccCCcceeeeccCCCCCHH
Confidence 9999999998877678899999999999764321 0000 11122221111111111 2234799
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHchhcCCcEEeccC
Q 018445 300 EELKAFIHDISEAKKGINHVPEPRSSFLEGARDVALLEAMLESGSKQGALVHVKK 354 (355)
Q Consensus 300 ~~~~~f~~~i~~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~v~~~~ 354 (355)
.++++|+++|+++. ++.++++|+++++++++|+++| +++|++|.|+.
T Consensus 304 ~~~~~f~~ai~~~~-------~~~~~~~d~~~~~~i~~a~~~S-a~~g~~V~l~~ 350 (352)
T 3kux_A 304 AYYAGIRDAIWGTA-------PNPVPATEAIKVMELIELGIAS-DQQKKALPIIA 350 (352)
T ss_dssp HHHHHHHHHHTTSS-------CCSSBHHHHHHHHHHHHHHHHH-HHHTSCEECCC
T ss_pred HHHHHHHHHHhCCC-------CCCCCHHHHHHHHHHHHHHHHH-HhcCCEEEeec
Confidence 99999999999998 8899999999999999999999 69999999974
No 8
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=100.00 E-value=7.7e-58 Score=418.41 Aligned_cols=316 Identities=18% Similarity=0.220 Sum_probs=263.5
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCH-HHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEE
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSE-ESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I 79 (355)
|++||||||+|.++. .|++.+ .++ ++|+||||+++ ++++.+++..+++..+ ...| +|+++||+++++|+|+|
T Consensus 1 M~~rvgiiG~G~~~~-~~~~~l--~~~-~~lvav~d~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~ll~~~~vD~V~I 73 (337)
T 3ip3_A 1 MSLKICVIGSSGHFR-YALEGL--DEE-CSITGIAPGVPEEDLSKLEKAISEMNIK-PKKY--NNWWEMLEKEKPDILVI 73 (337)
T ss_dssp -CEEEEEECSSSCHH-HHHTTC--CTT-EEEEEEECSSTTCCCHHHHHHHHTTTCC-CEEC--SSHHHHHHHHCCSEEEE
T ss_pred CceEEEEEccchhHH-HHHHhc--CCC-cEEEEEecCCchhhHHHHHHHHHHcCCC-Cccc--CCHHHHhcCCCCCEEEE
Confidence 899999999999998 499998 555 99999999998 5777776655455222 2344 99999999999999999
Q ss_pred ecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCe--EEEEecccCchHHHHHHHHHHH--h
Q 018445 80 VLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPI--WAVAENYRFEPAFVECKKLIAE--I 155 (355)
Q Consensus 80 ~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~--~~v~~~~r~~p~~~~~k~~i~~--i 155 (355)
+||+..|++++++||++|||||||||++.|++|+++|+++++++ |+. +++++++||+|.++++|++|++ |
T Consensus 74 ~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~------g~~~~~~v~~~~R~~p~~~~~k~~i~~g~i 147 (337)
T 3ip3_A 74 NTVFSLNGKILLEALERKIHAFVEKPIATTFEDLEKIRSVYQKV------RNEVFFTAMFGIRYRPHFLTAKKLVSEGAV 147 (337)
T ss_dssp CSSHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHH------TTTCCEEECCGGGGSHHHHHHHHHHHHTTT
T ss_pred eCCcchHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHh------CCceEEEecccccCCHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999999995 887 9999999999999999999997 9
Q ss_pred CCeeEEEEEEeeccCCCCCccCcccccc--ccCccccchhhHHHHHHHHHhCCcceeEEEeecccCC--CCCCCceEEEE
Q 018445 156 GDMMSVQVIVEGSMNSSNPYFSSSWRRN--FTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDK--TLPPPDNISSN 231 (355)
Q Consensus 156 G~i~~v~~~~~~~~~~~~~~~~~~w~~~--~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~--~~~~~d~~~~~ 231 (355)
|+|+.+++.+..++... ..|... .+||.++|+|+|.+|+++||+|.+|++|++....... ..+.+|++.++
T Consensus 148 G~i~~i~~~~~~~~~~~-----~~~~~~~~~~gG~l~d~g~H~iD~~~~l~G~~~~~V~a~~~~~~~~~~~~~~d~~~~~ 222 (337)
T 3ip3_A 148 GEIRLVNTQKSYKLGQR-----PDFYKKRETYGGTIPWVGIHAIDWIHWITGKKFLSVYATHSRLHNSGHGELETTALCH 222 (337)
T ss_dssp SSEEEEEEEEEBCCCSC-----CGGGGSHHHHCCHHHHTTHHHHHHHHHHHCCCEEEEEEEEECTTCTTCTTCCSEEEEE
T ss_pred cceEEEEEEecccCCCC-----cchhhcccccCCchhhcchHHHHHHHHhcCCCceEEEEEecccccCCCCCcceEEEEE
Confidence 99999999876443321 234433 6899999999999999999999779999998765432 24678999999
Q ss_pred EEecCCcEEEEEEEEecCC-----CCeEEEEEeeeeEEEEecCCCCCCCceeEEEeCCCCcceeeecCCCChHHHHHHHH
Q 018445 232 FQLENGCSGVFVMVVSSRS-----PKIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGADGQSKSMFYPFSGVTEELKAFI 306 (355)
Q Consensus 232 l~~~~G~~~~~~~~~~~~~-----~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 306 (355)
++|+||.++++..+|..+. ...+++|+|++|++.+... .+......+. ...+.+++..++++|+
T Consensus 223 l~~~~G~~~~~~~s~~~~~~~~~~~~~~~~i~G~~G~i~~~~~--------~~~~~~~~~~---~~~~~~~~~~~~~~f~ 291 (337)
T 3ip3_A 223 FTLENEVFASLSIDYLRPQGAPTHDDDRMRIVGTRGIVEVINE--------RVFLTDEKGH---REVPLVEKGQIFEDFL 291 (337)
T ss_dssp EEEGGGEEEEEEEESCCCTTSSSSBCCEEEEEESSCEEEEETT--------EEEEEETTEE---EEECCCCCCCHHHHHH
T ss_pred EEECCCcEEEEEEEEEcCCCCCCCCCcEEEEEecceEEEEeCC--------EEEEecCCCc---eeccCCchHHHHHHHH
Confidence 9999999999999997653 2368999999999998642 2333332221 1223456778999999
Q ss_pred HHHHHhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHchhcCCcEEecc
Q 018445 307 HDISEAKKGINHVPEPRSSFLEGARDVALLEAMLESGSKQGALVHVK 353 (355)
Q Consensus 307 ~~i~~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~v~~~ 353 (355)
++|+++. ++.++++|+++++++++|+++| +++|++|.+.
T Consensus 292 ~~i~~~~-------~~~~~~~d~~~~~~i~~a~~~S-a~~g~~V~~~ 330 (337)
T 3ip3_A 292 REIRGQG-------KCMVTPEDSILTTEIALKARLS-ADTGQIVLIE 330 (337)
T ss_dssp HHHTTSS-------CCSSCHHHHHHHHHHHHHHHHH-HHHTSCEEC-
T ss_pred HHhcCCC-------CCCCCHHHHHHHHHHHHHHHHH-HHhCCeEEee
Confidence 9999987 8899999999999999999999 6999999986
No 9
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=100.00 E-value=2.1e-57 Score=419.36 Aligned_cols=322 Identities=14% Similarity=0.180 Sum_probs=258.7
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
+||||||+|.+|...|++.+.+.++ ++|+||||++++++. +.++++. .| +|+++|++++++|+|+||||
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~-~~l~av~d~~~~~~~-------~~~~~~~-~~--~~~~~ll~~~~vD~V~i~tp 74 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPH-FELYKIVERSKELSK-------ERYPQAS-IV--RSFKELTEDPEIDLIVVNTP 74 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTT-EEEEEEECSSCCGGG-------TTCTTSE-EE--SCSHHHHTCTTCCEEEECSC
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCC-eEEEEEEcCCHHHHH-------HhCCCCc-eE--CCHHHHhcCCCCCEEEEeCC
Confidence 6999999999998668999998877 999999999988732 2333443 33 89999999999999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH--hCCeeE
Q 018445 83 GQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--IGDMMS 160 (355)
Q Consensus 83 ~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--iG~i~~ 160 (355)
+..|++++++||++|||||||||++.+++|+++|++++++ +|+.++|++++||+|.++++|++|++ ||+|+.
T Consensus 75 ~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~------~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG~i~~ 148 (362)
T 3fhl_A 75 DNTHYEYAGMALEAGKNVVVEKPFTSTTKQGEELIALAKK------KGLMLSVYQNRRWDADFLTVRDILAKSLLGRLVE 148 (362)
T ss_dssp GGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHH------HTCCEEEECGGGGSHHHHHHHHHHHTTTTSSEEE
T ss_pred hHHHHHHHHHHHHCCCeEEEecCCCCCHHHHHHHHHHHHH------cCCEEEEEecceeCHHHHHHHHHHHcCCCCCeEE
Confidence 9999999999999999999999999999999999999999 49999999999999999999999997 999999
Q ss_pred EEEEEeeccCCCCCccCcccccc--ccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCceEEEEEEecC--
Q 018445 161 VQVIVEGSMNSSNPYFSSSWRRN--FTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISSNFQLEN-- 236 (355)
Q Consensus 161 v~~~~~~~~~~~~~~~~~~w~~~--~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~-- 236 (355)
+++.+..+.+. +....|+.+ .+||+++|+|+|.+|+++||+| +|++|++......+..+.+|++.++++|+|
T Consensus 149 v~~~~~~~~~~---~~~~~w~~~~~~ggG~l~d~g~H~id~~~~l~G-~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~~~ 224 (362)
T 3fhl_A 149 YESTFARYRNF---IKPNTWKETGESGGGLTYNLGSHLIDQAIQLFG-MPEAVFADLGILREGGKVDDYFIIHLLHPSLA 224 (362)
T ss_dssp EEEEEECBCCC-----------------CHHHHTHHHHHHHHHHHHC-CEEEEEEEEECCSTTCCSCCEEEEEEEEETTS
T ss_pred EEEEecccCCC---CCccccccCCCCCCceeeeehhhHHHHHHHHhC-CCcEEEEEEEEeCCCCCcceEEEEEEEECCCC
Confidence 99987532221 112347765 7899999999999999999999 899999988766555678999999999999
Q ss_pred -CcEEEEEEEEecCCCCeEEEEEeeeeEEEEecCCCCCC----------Cc---------eeEEEeCCCCcc--eeeecC
Q 018445 237 -GCSGVFVMVVSSRSPKIFWRVVGMKGTLQVERGNQDGR----------HG---------YLVTQYGADGQS--KSMFYP 294 (355)
Q Consensus 237 -G~~~~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~~~----------~~---------~~~~~~~~~~~~--~~~~~~ 294 (355)
|.++++..+|..+....+++|+|++|++.++....... .. ..+.... ++.. ......
T Consensus 225 ~G~~~~~~~s~~~~~~~~~~~i~G~~G~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~ 303 (362)
T 3fhl_A 225 PNVKITLKASYLMREAEPRFALHGTLGSYVKYGVDKQEAALLAGEIPERPNWGEESEQEWGLLHTEI-NGKEICRKYPGI 303 (362)
T ss_dssp TTSEEEEEEESBCSSCCCSEEEEESSCEEEECCC---------------CCCSCCCGGGCEEEEEEE-TTEEEEEEECCC
T ss_pred CCeEEEEEEEeccCCCCCEEEEEECCcEEEEeCCCccHHHHhcCCCCCCCccCCCchhhCcEEEecC-CCcceeeecCCC
Confidence 99999999998877667899999999999865331100 00 0111111 1111 111122
Q ss_pred CCChHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHchhcCCcEEeccC
Q 018445 295 FSGVTEELKAFIHDISEAKKGINHVPEPRSSFLEGARDVALLEAMLESGSKQGALVHVKK 354 (355)
Q Consensus 295 ~~~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~v~~~~ 354 (355)
...|..++++|+++|+++. ++.++++|+++++++++|+++| +++|++|.++.
T Consensus 304 ~~~~~~~~~~f~~ai~~g~-------~~~~~~~dal~~~~ii~a~~~S-a~~g~~V~l~~ 355 (362)
T 3fhl_A 304 AGNYGGFYQNIYEHLCLGQ-------PLETHAQDILNVIRIIEAAYQS-HRENKIVNLKE 355 (362)
T ss_dssp CCCTTHHHHHHHHHHHHCC-------CCSCBTHHHHHHHHHHHHHHHH-HHHTSCEEC--
T ss_pred CCCHHHHHHHHHHHHhCCC-------CCCCCHHHHHHHHHHHHHHHhh-hhcCCEEEecc
Confidence 4578999999999999998 8889999999999999999999 69999999874
No 10
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=100.00 E-value=6.3e-57 Score=414.15 Aligned_cols=321 Identities=15% Similarity=0.177 Sum_probs=267.1
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEe
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
|++||||||+|.+|...|++.+.+.++ ++|++|||++ +++.++++.. .+++. .| +|+++|++++++|+|+|+
T Consensus 1 M~~rvgiiG~G~~g~~~~~~~l~~~~~-~~l~av~d~~--~~~~~a~~~~--~~~~~-~~--~~~~~ll~~~~~D~V~i~ 72 (349)
T 3i23_A 1 MTVKMGFIGFGKSANRYHLPYVMIRET-LEVKTIFDLH--VNEKAAAPFK--EKGVN-FT--ADLNELLTDPEIELITIC 72 (349)
T ss_dssp CCEEEEEECCSHHHHHTTHHHHTTCTT-EEEEEEECTT--CCHHHHHHHH--TTTCE-EE--SCTHHHHSCTTCCEEEEC
T ss_pred CeeEEEEEccCHHHHHHHHHHHhhCCC-eEEEEEECCC--HHHHHHHhhC--CCCCe-EE--CCHHHHhcCCCCCEEEEe
Confidence 899999999999998559999988776 9999999999 5666665221 13443 33 899999999999999999
Q ss_pred cCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH--hCCe
Q 018445 81 LAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--IGDM 158 (355)
Q Consensus 81 tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--iG~i 158 (355)
||+..|++++++||++||||+||||++.|++|+++|++++++ +|+.+++++++||+|.++++|++|++ ||+|
T Consensus 73 tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~------~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i 146 (349)
T 3i23_A 73 TPAHTHYDLAKQAILAGKSVIVEKPFCDTLEHAEELFALGQE------KGVVVMPYQNRRFDGDYLAMKQVVEQGFLGEI 146 (349)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHH------TTCCEEECCGGGGCHHHHHHHHHHHHTTTCSE
T ss_pred CCcHHHHHHHHHHHHcCCEEEEECCCcCCHHHHHHHHHHHHH------cCCeEEEEecccCCHHHHHHHHHHhcCCCCCE
Confidence 999999999999999999999999999999999999999999 59999999999999999999999997 9999
Q ss_pred eEEEEEEeeccCCCCCccCcccccc-ccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCceEEEEEEecCC
Q 018445 159 MSVQVIVEGSMNSSNPYFSSSWRRN-FTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISSNFQLENG 237 (355)
Q Consensus 159 ~~v~~~~~~~~~~~~~~~~~~w~~~-~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~G 237 (355)
..+++.+..+. +. .+|+.. .+||+++|+|+|.+|+++||+| +|++|++.........+.+|++.++++|+||
T Consensus 147 ~~~~~~~~~~~----~~--~~w~~~~~ggG~l~d~g~H~id~~~~l~G-~p~~V~a~~~~~~~~~~~~d~~~~~l~~~~G 219 (349)
T 3i23_A 147 NEVETHIDYYR----PG--SITEQGPKENGSFYGLGIHLMDRMIALFG-RPDQVTYDIRNNEVSEAVDNYFDVDLHYGSK 219 (349)
T ss_dssp EEEEEECCCBC----TT--SCCSCCCGGGSHHHHTHHHHHHHHHHHHC-CCSEEEECEECSSSTTSCCCEEEEEEEETTT
T ss_pred EEEEEEecccC----Cc--hhhcccCCCCCeehhhhhHHHHHHHHHhC-CCeEEEEEEEeeCCCCCcceEEEEEEEeCCC
Confidence 99998764321 11 357665 7899999999999999999999 8999999876655555689999999999999
Q ss_pred cEEEEEEEEecCCCCeEEEEEeeeeEEEEecCCC----------CCC---------CceeEEEeCCCCcceee-e-cCCC
Q 018445 238 CSGVFVMVVSSRSPKIFWRVVGMKGTLQVERGNQ----------DGR---------HGYLVTQYGADGQSKSM-F-YPFS 296 (355)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~----------~~~---------~~~~~~~~~~~~~~~~~-~-~~~~ 296 (355)
.++++..++..+....+++|+|++|++.+..... ... ....+.....++..... . ...+
T Consensus 220 ~~~~~~~s~~~~~~~~~~~i~G~~G~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~ 299 (349)
T 3i23_A 220 LKVKVKTNHSVASPYPRFIVHGSNGSFIKYGEDQQENDLKAGIMPDAPGFGEDSPMYYGEVTYRNGNGDWIKKQIKTPVG 299 (349)
T ss_dssp EEEEEEECSBCSSCCCSEEEEESSEEEEECSCCCHHHHHTTTCCTTSTTTTCCCGGGCEEEEEECTTSCEEEEEECCCCC
T ss_pred cEEEEEEecccCCCCCEEEEEecceEEEEcCCCchHHHHhcCCCCCCCCCCCCchhhceEEEeccCCCceeeeecCCCCC
Confidence 9999999998877667899999999999764321 000 01123334434433322 2 2246
Q ss_pred ChHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHchhcCCcEE
Q 018445 297 GVTEELKAFIHDISEAKKGINHVPEPRSSFLEGARDVALLEAMLESGSKQGALV 350 (355)
Q Consensus 297 ~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~v 350 (355)
+|..++++|+++|+++. ++.++++|+++++++++|+++| +++|++.
T Consensus 300 ~~~~~~~~f~~ai~~g~-------~~~~~~~da~~~~~ii~a~~~S-a~~Gr~~ 345 (349)
T 3i23_A 300 DYGRYYDAVYETLKNGA-------PQLVTKEQALTNIEILEAGFLN-PSPSVYH 345 (349)
T ss_dssp CTTHHHHHHHHHHHHCC-------CCSSCHHHHHHHHHHHHHTTTS-CSSEEEE
T ss_pred CHHHHHHHHHHHHhCCC-------CCCCCHHHHHHHHHHHHHHHHh-HHHHHhh
Confidence 79999999999999998 8899999999999999999999 5777754
No 11
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=100.00 E-value=2e-56 Score=411.94 Aligned_cols=317 Identities=20% Similarity=0.317 Sum_probs=263.5
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
+||||||+|.+|.. |++.+.+.++ ++|+++||+++++++.+ + ++ ++. .| +|+++|++++++|+|+||||
T Consensus 6 ~~vgiiG~G~~g~~-~~~~l~~~~~-~~l~av~d~~~~~~~~a-~---~~--g~~-~~--~~~~~ll~~~~~D~V~i~tp 74 (359)
T 3e18_A 6 YQLVIVGYGGMGSY-HVTLASAADN-LEVHGVFDILAEKREAA-A---QK--GLK-IY--ESYEAVLADEKVDAVLIATP 74 (359)
T ss_dssp EEEEEECCSHHHHH-HHHHHHTSTT-EEEEEEECSSHHHHHHH-H---TT--TCC-BC--SCHHHHHHCTTCCEEEECSC
T ss_pred CcEEEECcCHHHHH-HHHHHHhCCC-cEEEEEEcCCHHHHHHH-H---hc--CCc-ee--CCHHHHhcCCCCCEEEEcCC
Confidence 69999999999985 9999998876 99999999999998643 2 34 553 33 89999999999999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH--hCCeeE
Q 018445 83 GQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--IGDMMS 160 (355)
Q Consensus 83 ~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--iG~i~~ 160 (355)
+..|++++++||++||||+||||++.+++|+++|++++++ +|+.++|++++||.|.++++|++|++ ||+|..
T Consensus 75 ~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~------~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~ 148 (359)
T 3e18_A 75 NDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKR------VNKHFMVHQNRRWDEDFLIIKEMFEQKTIGEMFH 148 (359)
T ss_dssp GGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHH------HTCCEEEECGGGGCHHHHHHHHHHHHTTTSSEEE
T ss_pred cHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHH------hCCeEEEEeeeccCHHHHHHHHHHHcCCCCCeEE
Confidence 9999999999999999999999999999999999999999 49999999999999999999999997 999999
Q ss_pred EEEEEeeccCCCCCccCcccccc--ccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCceEEEEEEecCCc
Q 018445 161 VQVIVEGSMNSSNPYFSSSWRRN--FTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISSNFQLENGC 238 (355)
Q Consensus 161 v~~~~~~~~~~~~~~~~~~w~~~--~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~G~ 238 (355)
+++.+..+.. .+.+|+.+ .+||+++|+|+|.+|+++||+|.+|++|++...... ..+.+|++.++++|+||+
T Consensus 149 ~~~~~~~~~~-----~~~~wr~~~~~gGG~l~d~g~H~iD~~~~l~G~~~~~v~a~~~~~~-~~~~~d~~~~~l~~~~G~ 222 (359)
T 3e18_A 149 LESRVHGANG-----IPGDWRHLKAHGGGMVLDWGVHLLDQLLFLVDSNVKSVSANLSFAL-GDEVDDGFVTFITFENGI 222 (359)
T ss_dssp EEEEEECSSC-----SCSSGGGCGGGTCSHHHHTHHHHHHHHHHHCCSCEEEEEEEEECTT-CCSSCSEEEEEEEETTSC
T ss_pred EEEEEecCCC-----CCCCcccCcCCCCcHHHHHhhHHHHHHHHHhCCCCeEEEEEEEecC-CCCCCceEEEEEEECCCC
Confidence 9987643211 12457764 789999999999999999999988999999876543 235789999999999999
Q ss_pred EEEEEEEEecCCCCeEEEEEeeeeEEEEecCCCCCCCceeEEEeCCC-------------C-----------cceeeec-
Q 018445 239 SGVFVMVVSSRSPKIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGAD-------------G-----------QSKSMFY- 293 (355)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~-------------~-----------~~~~~~~- 293 (355)
+++++.++.......+++|+|++|++.++..... ..+...... + .......
T Consensus 223 ~~~i~~s~~~~~~~~~~~i~G~~G~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 298 (359)
T 3e18_A 223 TAQIEVGTTNFIKLPRWYVKGTEGTGIIHDWDLS----GEIVKPTALAKTSEPTPIKAGQGLTKTMAPPSEEATNTLSLP 298 (359)
T ss_dssp EEEEEEESSCSSCCCSEEEEETTEEEEECSTTCC----EEEEEECTTTTTCCCCCEEETTEEESTTSCCCGGGEEEECCC
T ss_pred EEEEEEeeccCCCCCeEEEEeeeEEEEEcCcCcc----chhhccccccccccCCccccccccccccCCcCCCcccceecC
Confidence 9999999887665578999999999999865321 011111000 0 0001111
Q ss_pred -CCCChHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHchhcCCcEEeccC
Q 018445 294 -PFSGVTEELKAFIHDISEAKKGINHVPEPRSSFLEGARDVALLEAMLESGSKQGALVHVKK 354 (355)
Q Consensus 294 -~~~~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~v~~~~ 354 (355)
....|..++++|+++|+++. ++.++.+|+++++++++|+++| +++|++|.+++
T Consensus 299 ~~~~~~~~~~~~f~~ai~~~~-------~~~~~~~dal~~~~ii~A~~~S-a~~g~~V~l~~ 352 (359)
T 3e18_A 299 APAKLAPSFYNNFVDVLNNTS-------EPIVQNEEVYQVLKLIEAIFEA-AETNRTVHSIE 352 (359)
T ss_dssp CCCCCCSCHHHHHHHHHTTSS-------CCSSCHHHHHHHHHHHHHHHHH-HHHTSCEEC--
T ss_pred CCCCCHHHHHHHHHHHHhCCC-------CCCCCHHHHHHHHHHHHHHHHH-HhhCcEEEEec
Confidence 12468889999999999987 8899999999999999999999 69999999975
No 12
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=100.00 E-value=2.1e-56 Score=411.88 Aligned_cols=321 Identities=20% Similarity=0.244 Sum_probs=260.4
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
+||||||+|.+|...|++.+.+.++ ++|+++||++++++ ++ .+++.. .| +|+++|++++++|+|+|+||
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~-~~l~av~d~~~~~~---~~----~~~~~~-~~--~~~~~ll~~~~vD~V~i~tp 74 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVLDE-YQISKIMTSRTEEV---KR----DFPDAE-VV--HELEEITNDPAIELVIVTTP 74 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTT-EEEEEEECSCHHHH---HH----HCTTSE-EE--SSTHHHHTCTTCCEEEECSC
T ss_pred ceEEEEccCHHHHHHHHHHHhhCCC-eEEEEEEcCCHHHH---Hh----hCCCCc-eE--CCHHHHhcCCCCCEEEEcCC
Confidence 7999999999998558999988876 99999999999763 22 233443 33 89999999999999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH--hCCeeE
Q 018445 83 GQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--IGDMMS 160 (355)
Q Consensus 83 ~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--iG~i~~ 160 (355)
+..|++++++||++|||||||||++.+++|+++|++++++ +|+.++|++++||+|.++++|++|++ ||+|..
T Consensus 75 ~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~------~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~ 148 (358)
T 3gdo_A 75 SGLHYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADE------KGVLLSVYHNRRWDNDFLTIKKLISEGSLEDINT 148 (358)
T ss_dssp TTTHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHH------HTCCEEEECGGGGSHHHHHHHHHHHTTSSCSCCE
T ss_pred cHHHHHHHHHHHHcCCeEEEecCCcCCHHHHHHHHHHHHH------cCCeEEEeeecccCHHHHHHHHHHhcCCCCceEE
Confidence 9999999999999999999999999999999999999999 49999999999999999999999997 999999
Q ss_pred EEEEEeeccCCCCCccCcccccc--ccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCceEEEEEEecCCc
Q 018445 161 VQVIVEGSMNSSNPYFSSSWRRN--FTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISSNFQLENGC 238 (355)
Q Consensus 161 v~~~~~~~~~~~~~~~~~~w~~~--~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~G~ 238 (355)
+++.+... .+.....|+.+ .+||.++|+|+|.+|+++|++| +|++|++......+..+.+|++.++++|+| .
T Consensus 149 ~~~~~~~~----~~~~~~~w~~~~~~ggG~l~d~g~H~id~~~~l~G-~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~-~ 222 (358)
T 3gdo_A 149 YQVSYNRY----RPEVQARWREKEGTATGTLYDLGSHIIDQTLHLFG-MPKAVTANVMAQRENAETVDYFHLTLDYGK-L 222 (358)
T ss_dssp EEEECCCB----CCCC----------CCSHHHHTHHHHHHHHHHHHC-CCSEEEEEEECCSTTCCSCCEEEEEEEETT-E
T ss_pred EEEEEecc----CCCCCcccccCCCCCCceeeeehhHHHHHHHHHcC-CCeEEEEEEEeecCCCCcCceEEEEEEECC-E
Confidence 99876432 22223457765 7899999999999999999999 899999988766555678999999999999 8
Q ss_pred EEEEEEEEecCCCCeEEEEEeeeeEEEEecCCCC----------CCCc---------eeEEEeCCCCcceee-ecCCCCh
Q 018445 239 SGVFVMVVSSRSPKIFWRVVGMKGTLQVERGNQD----------GRHG---------YLVTQYGADGQSKSM-FYPFSGV 298 (355)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~----------~~~~---------~~~~~~~~~~~~~~~-~~~~~~~ 298 (355)
.+++..++..+....+++|+|++|++.++..... .... ..+......+..... ....+.|
T Consensus 223 ~~~~~~s~~~~~~~~~~~i~G~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 302 (358)
T 3gdo_A 223 QAILYGGSIVPANGPRYQIHGKDSSFIKYGIDGQEDALRAGRKPEDDSWGADVPEFYGKLTTIRGSDKKTETIPSVNGSY 302 (358)
T ss_dssp EEEEEECSBCSSCCCSEEEECSSEEEEECCCCSHHHHHHTTCCCCSTTTTCCCGGGCEEEEEEETTEEEEEEECCCCCCT
T ss_pred EEEEEEEeccCCCCCEEEEEeCceEEEEeCCChHHHHHhcCCCCCccccCcCcccccceEEecCCCceeeeeecCCCCcH
Confidence 9999999988776678999999999998653210 0000 111111111111111 1233679
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHchhcCCcEEeccC
Q 018445 299 TEELKAFIHDISEAKKGINHVPEPRSSFLEGARDVALLEAMLESGSKQGALVHVKK 354 (355)
Q Consensus 299 ~~~~~~f~~~i~~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~v~~~~ 354 (355)
..++++|+++|+++. ++.++++|+++++++++|+++| +++|++|.+..
T Consensus 303 ~~~~~~f~~ai~~g~-------~~~~~~~da~~~~~i~~a~~~S-a~~g~~V~~~~ 350 (358)
T 3gdo_A 303 LTYYRKIAESIREGA-------ALPVTAEEGINVIRIIEAAMES-SKEKRTIMLEH 350 (358)
T ss_dssp HHHHHHHHHHHHHCC-------CCSSCHHHHHHHHHHHHHHHHH-HHHTBCEECC-
T ss_pred HHHHHHHHHHHhCCC-------CCCCCHHHHHHHHHHHHHHHHH-HhcCCEEEeee
Confidence 999999999999998 8899999999999999999999 69999999863
No 13
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=100.00 E-value=2.2e-56 Score=410.04 Aligned_cols=320 Identities=23% Similarity=0.289 Sum_probs=268.4
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEe
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
|++||||||+|.+|.. |++.+.+.++ ++|+++||+++++++.+++ ++ ++...| +|+++|++++++|+|+|+
T Consensus 1 M~~rvgiIG~G~~g~~-~~~~l~~~~~-~~l~av~d~~~~~~~~~~~---~~--~~~~~~--~~~~~ll~~~~~D~V~i~ 71 (344)
T 3ezy_A 1 MSLRIGVIGLGRIGTI-HAENLKMIDD-AILYAISDVREDRLREMKE---KL--GVEKAY--KDPHELIEDPNVDAVLVC 71 (344)
T ss_dssp -CEEEEEECCSHHHHH-HHHHGGGSTT-EEEEEEECSCHHHHHHHHH---HH--TCSEEE--SSHHHHHHCTTCCEEEEC
T ss_pred CeeEEEEEcCCHHHHH-HHHHHHhCCC-cEEEEEECCCHHHHHHHHH---Hh--CCCcee--CCHHHHhcCCCCCEEEEc
Confidence 8899999999999986 9999998876 9999999999999998887 34 444444 899999999999999999
Q ss_pred cCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH--hCCe
Q 018445 81 LAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--IGDM 158 (355)
Q Consensus 81 tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--iG~i 158 (355)
||+..|++++++|+++||||+||||++.+++++++|.+++++ +|+.+++++++||+|.++++|++|++ ||+|
T Consensus 72 tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~------~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG~i 145 (344)
T 3ezy_A 72 SSTNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKK------ADVILFTGFNRRFDRNFKKLKEAVENGTIGKP 145 (344)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHH------HTCCEEEECGGGGCHHHHHHHHHHHTTTTSSE
T ss_pred CCCcchHHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHH------hCCcEEEeecccCCHHHHHHHHHHHcCCCCCe
Confidence 999999999999999999999999999999999999999999 49999999999999999999999997 9999
Q ss_pred eEEEEEEeeccCCCCCccCccccccccCccccchhhHHHHHHHHHhCCcceeEEEeecccCC----CCCCCceEEEEEEe
Q 018445 159 MSVQVIVEGSMNSSNPYFSSSWRRNFTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDK----TLPPPDNISSNFQL 234 (355)
Q Consensus 159 ~~v~~~~~~~~~~~~~~~~~~w~~~~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~----~~~~~d~~~~~l~~ 234 (355)
..+++.+..+.. + ...|.. .+||.++|+|+|.+|+++||+|.+|++|++.+..... ..+.+|++.++++|
T Consensus 146 ~~~~~~~~~~~~---~--~~~~~~-~~GG~l~d~g~H~lDl~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~D~~~~~l~~ 219 (344)
T 3ezy_A 146 HVLRITSRDPAP---P--PLDYIR-VSGGIFLDMTIHDFDMARYIMGEEVEEVFADGSVLVDEEIGKAGDVDTAVVVLRF 219 (344)
T ss_dssp EEEEEEEECSSC---C--CHHHHH-TTTCHHHHTHHHHHHHHHHHHSSCEEEEEEEEECCSCHHHHHTTCCSEEEEEEEE
T ss_pred EEEEEEeeCCCC---C--Cccccc-CCCceEecccchHHHHHHHHcCCCCeEEEEEeccccccccccCCCCceEEEEEEE
Confidence 999987542211 1 122322 6899999999999999999999889999998765432 12346899999999
Q ss_pred cCCcEEEEEEEEecCCC-CeEEEEEeeeeEEEEecCCCCCCCceeEEEeCCCCcceeeecC------CCChHHHHHHHHH
Q 018445 235 ENGCSGVFVMVVSSRSP-KIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGADGQSKSMFYP------FSGVTEELKAFIH 307 (355)
Q Consensus 235 ~~G~~~~~~~~~~~~~~-~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~f~~ 307 (355)
+||.++++..+|..+.. ..+++|+|++|++.++..... .+.....++.......+ .++|..++++|++
T Consensus 220 ~~G~~~~~~~s~~~~~~~~~~~~i~G~~G~i~~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~f~~ 294 (344)
T 3ezy_A 220 KSGALGVIDNSRRAVYGYDQRIEVFGSKGRIFADNVRET-----TVVLTDEQGDRGSRYLYFFLERYRDSYLEELKTFIK 294 (344)
T ss_dssp TTSCEEEEEEESCCTTSCEEEEEEEETTEEEEECCCBSC-----SEEEEETTEEEECCBCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEecccCCCCceEEEEEECcEEEEEccCCCc-----eEEEEcCCCcccCCCccchhhhhhHHHHHHHHHHHH
Confidence 99999999999987654 478999999999999875321 23333333322111111 2468899999999
Q ss_pred HHHHhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHchhcCCcEEeccC
Q 018445 308 DISEAKKGINHVPEPRSSFLEGARDVALLEAMLESGSKQGALVHVKK 354 (355)
Q Consensus 308 ~i~~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~v~~~~ 354 (355)
+|+++. .+.++++|+++++++++|+++| +++|++|.|+.
T Consensus 295 ~i~~~~-------~~~~~~~~~~~~~~i~~a~~~S-~~~g~~V~~~~ 333 (344)
T 3ezy_A 295 NVKSGE-------PPAVSGEDGKMALLLGYAAKKS-LEEKRSVKLEE 333 (344)
T ss_dssp HHHHTC-------CCSSCHHHHHHHHHHHHHHHHH-HHHTBCEEGGG
T ss_pred HHhcCC-------CCCCCHHHHHHHHHHHHHHHHH-HHhCCeEEecc
Confidence 999998 8899999999999999999999 68999999974
No 14
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=3.9e-56 Score=410.84 Aligned_cols=321 Identities=20% Similarity=0.275 Sum_probs=260.3
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
++||||||+|.+|...|++.+.+.++ ++|+++||++++++++ .+++.. .| +|+++|++++++|+|+|||
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~-~~l~av~d~~~~~~~~-------~~~~~~-~~--~~~~~ll~~~~~D~V~i~t 75 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPG-LNLAFVASRDEEKVKR-------DLPDVT-VI--ASPEAAVQHPDVDLVVIAS 75 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTT-EEEEEEECSCHHHHHH-------HCTTSE-EE--SCHHHHHTCTTCSEEEECS
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCC-eEEEEEEcCCHHHHHh-------hCCCCc-EE--CCHHHHhcCCCCCEEEEeC
Confidence 37999999999998558999998877 9999999999987652 223443 33 8999999999999999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH--hCCee
Q 018445 82 AGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--IGDMM 159 (355)
Q Consensus 82 p~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--iG~i~ 159 (355)
|+..|++++++||++|||||||||++.+++|+++|++++++ +|+.++|++++||+|.++++|++|++ ||+|.
T Consensus 76 p~~~H~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~------~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~ 149 (364)
T 3e82_A 76 PNATHAPLARLALNAGKHVVVDKPFTLDMQEARELIALAEE------KQRLLSVFHNRRWDSDYLGIRQVIEQGTLGAVK 149 (364)
T ss_dssp CGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHH------TTCCEEECCCCTTCHHHHHHHHHHHHTTTCSEE
T ss_pred ChHHHHHHHHHHHHCCCcEEEeCCCcCCHHHHHHHHHHHHH------hCCeEEEEeecccCHHHHHHHHHHHcCCCcceE
Confidence 99999999999999999999999999999999999999999 59999999999999999999999997 99999
Q ss_pred EEEEEEeeccCCCCCccCcccccc--ccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCceEEEEEEecCC
Q 018445 160 SVQVIVEGSMNSSNPYFSSSWRRN--FTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISSNFQLENG 237 (355)
Q Consensus 160 ~v~~~~~~~~~~~~~~~~~~w~~~--~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~G 237 (355)
.+++.+.... +....+|+.+ .+||.++|+|+|.+|+++||+| +|++|++......+..+.+|++.++++|+|
T Consensus 150 ~~~~~~~~~~----~~~~~~w~~~~~~ggG~l~d~g~H~id~~~~l~G-~p~~V~a~~~~~~~~~~~~d~~~~~l~~~~- 223 (364)
T 3e82_A 150 HFESHFDRFR----PEVRVRWREQNVPGSGLWFDLGPHLIDQALQLFG-LPQSVQGNIATLRDGAEINDWAHVVLNYPA- 223 (364)
T ss_dssp EEEEEEECBC----CCC-----------CCHHHHHHHHHHHHHHHHHC-CCSEEEEEEECCSTTCCSCCEEEEEEECSS-
T ss_pred EEEEEeeccC----CCCCcccccCCCCCCChHHhhhhHHHHHHHHHhC-CCeEEEEEEEeecCCCCcccEEEEEEEECC-
Confidence 9998875322 2223467765 7899999999999999999999 799999988765555678999999999999
Q ss_pred cEEEEEEEEecCCCCeEEEEEeeeeEEEEecCCCC----------CCCce-----eEEEeCCCCcceeeecCCCChHHHH
Q 018445 238 CSGVFVMVVSSRSPKIFWRVVGMKGTLQVERGNQD----------GRHGY-----LVTQYGADGQSKSMFYPFSGVTEEL 302 (355)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~----------~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (355)
..+++..++..+....+++|+|++|++.++..... ....+ ..................+.|..++
T Consensus 224 ~~~~~~~s~~~~~~~~~~~i~G~~G~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (364)
T 3e82_A 224 HKVILHCSMLVAGGSSRFTVHGDKGSVIKARADQQESQLLAGVVPGSADWGQDDDPLVIYDASLQAHAQATPQGDQRQYY 303 (364)
T ss_dssp CEEEEEEESBCCSCCCSEEEEESSEEEEECSCCCHHHHHHHTCCTTSTTTTCCCSCEEEEETTSCEEEECCCCCCTHHHH
T ss_pred EEEEEEEecccCCCCCEEEEEeCCEEEEEecCChhHHHHhcCCCCCccccccCCCCceeecCCccceecCCCCCCHHHHH
Confidence 88999999988776678999999999998643210 00000 0111111111111112235799999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHchhcCCcEEecc
Q 018445 303 KAFIHDISEAKKGINHVPEPRSSFLEGARDVALLEAMLESGSKQGALVHVK 353 (355)
Q Consensus 303 ~~f~~~i~~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~v~~~ 353 (355)
++|+++|+++. ++.++++|+++++++++|+++| +++|++|.|+
T Consensus 304 ~~f~~ai~~g~-------~~~~~~~dal~~~~i~~A~~~S-a~~g~~V~l~ 346 (364)
T 3e82_A 304 MLIRDALKGQI-------ANPVPPVEALAVMAVLEAAVRS-AESGMVQTLD 346 (364)
T ss_dssp HHHHHHHTTSS-------CCSSCHHHHHHHHHHHHHHHHH-HHHSBCBCCC
T ss_pred HHHHHHHhcCC-------CCCCCHHHHHHHHHHHHHHHHH-HhcCCEEEEE
Confidence 99999999998 8889999999999999999999 6999999886
No 15
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=100.00 E-value=1.5e-56 Score=411.06 Aligned_cols=314 Identities=19% Similarity=0.247 Sum_probs=264.1
Q ss_pred CCceEEEEecccccchhccchhh-hcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCc-cccccCcchhhhhcCCCccEEE
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLA-EISDLVSLKFIWSRSEESAKSAAEVARKHFADV-ECVWGDNGLEQIIKEDSILGVA 78 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~-~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ell~~~~~D~V~ 78 (355)
|++||||||+|.||.. |++.+. +.++ ++|+++||+++++++.+++ ++ ++ ...| +|+++|++++++|+|+
T Consensus 1 M~~rigiIG~G~~g~~-~~~~l~~~~~~-~~l~av~d~~~~~~~~~~~---~~--g~~~~~~--~~~~~ll~~~~~D~V~ 71 (344)
T 3mz0_A 1 MSLRIGVIGTGAIGKE-HINRITNKLSG-AEIVAVTDVNQEAAQKVVE---QY--QLNATVY--PNDDSLLADENVDAVL 71 (344)
T ss_dssp CCEEEEEECCSHHHHH-HHHHHHHTCSS-EEEEEEECSSHHHHHHHHH---HT--TCCCEEE--SSHHHHHHCTTCCEEE
T ss_pred CeEEEEEECccHHHHH-HHHHHHhhCCC-cEEEEEEcCCHHHHHHHHH---Hh--CCCCeee--CCHHHHhcCCCCCEEE
Confidence 8899999999999986 999998 6666 9999999999999999887 34 32 2233 8999999999999999
Q ss_pred EecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeE-EEEecccCchHHHHHHHHHHH--h
Q 018445 79 VVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIW-AVAENYRFEPAFVECKKLIAE--I 155 (355)
Q Consensus 79 I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~-~v~~~~r~~p~~~~~k~~i~~--i 155 (355)
|+||+..|++++++|+++||||+||||++.+++++++|++++++. |+.+ +|++++||+|.++++|++|++ |
T Consensus 72 i~tp~~~h~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~------g~~~~~v~~~~r~~p~~~~~k~~i~~g~i 145 (344)
T 3mz0_A 72 VTSWGPAHESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKV------GKRLVQVGFMRRYDSGYVQLKEALDNHVI 145 (344)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHH------SSCCEEECCGGGGSHHHHHHHHHHHTTTT
T ss_pred ECCCchhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHH------CCEEEEEecccccCHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999994 8877 999999999999999999997 9
Q ss_pred CCeeEEEEEEeeccCCCCCccCccccccccCccccchhhHHHHHHHHHhCCcceeEEEeecccCC--CCCCCceEEEEEE
Q 018445 156 GDMMSVQVIVEGSMNSSNPYFSSSWRRNFTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDK--TLPPPDNISSNFQ 233 (355)
Q Consensus 156 G~i~~v~~~~~~~~~~~~~~~~~~w~~~~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~--~~~~~d~~~~~l~ 233 (355)
|+|..+++.+..+. .+..|+ +||.++|+|+|.+|+++||+|.+|++|++....... ..+.+|++.++++
T Consensus 146 G~i~~v~~~~~~~~------~~~~w~---ggg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~~~D~~~~~l~ 216 (344)
T 3mz0_A 146 GEPLMIHCAHRNPT------VGDNYT---TDMAVVDTLVHEIDVLHWLVNDDYESVQVIYPKKSKNALPHLKDPQIVVIE 216 (344)
T ss_dssp SSEEEEEEEEECSC------CCTTCC---TTHHHHTTTHHHHHHHHHHHTCCEEEEEEECCSCCTTSCTTCCCSEEEEEE
T ss_pred CCcEEEEEEecCCC------CCcccc---CCchhhhhhhHHHHHHHHhcCCCcEEEEEEEeccccccCCCCCceEEEEEE
Confidence 99999998754221 123465 788999999999999999999779999998754322 2357899999999
Q ss_pred ecCCcEEEEEEEEecCCC-CeEEEEEeeeeEEEEecCCCCCCCceeEEEeCCCCcceeee-----cCCCChHHHHHHHHH
Q 018445 234 LENGCSGVFVMVVSSRSP-KIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGADGQSKSMF-----YPFSGVTEELKAFIH 307 (355)
Q Consensus 234 ~~~G~~~~~~~~~~~~~~-~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~f~~ 307 (355)
|+||.+++++.+|..+.. ..+++|+|++|++.++.... +.+....+...... ...++|..++++|++
T Consensus 217 ~~~G~~~~~~~s~~~~~~~~~~~~i~G~~G~i~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 289 (344)
T 3mz0_A 217 TKGGIVINAEIYVNCKYGYDIQCEIVGEDGIIKLPEPSS-------ISLRKEGRFSTDILMDWQRRFVAAYDVEIQDFID 289 (344)
T ss_dssp ETTCCEEEEEEETTCSSCCEEEEEEEESSCEEECCCCCC-------CEEEETTEEEECCCSCHHHHSHHHHHHHHHHHHH
T ss_pred ECCCCEEEEEEEeccCCCCcceEEEEeCCCEEEEcCCCc-------EEEEeCCCccccccCchhhhhhHHHHHHHHHHHH
Confidence 999999999999877544 46899999999999984332 22222221111111 112578899999999
Q ss_pred HH-HHhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHchhcCCcEEecc
Q 018445 308 DI-SEAKKGINHVPEPRSSFLEGARDVALLEAMLESGSKQGALVHVK 353 (355)
Q Consensus 308 ~i-~~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~v~~~ 353 (355)
+| +++. ++.++++|+++++++++|+++| +++|++|.++
T Consensus 290 ~i~~~g~-------~~~~~~~d~~~~~~i~~a~~~S-a~~g~~V~l~ 328 (344)
T 3mz0_A 290 SIQKKGE-------VSGPTAWDGYIAAVTTDACVKA-QESGQKEKVE 328 (344)
T ss_dssp HHHHHSS-------CCSSCHHHHHHHHHHHHHHHHH-HHHCSCEECC
T ss_pred HHHhCCC-------CCCCCHHHHHHHHHHHHHHHHH-HHhCCcEEEe
Confidence 99 9987 8889999999999999999999 6999999986
No 16
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=100.00 E-value=8.6e-56 Score=413.45 Aligned_cols=330 Identities=15% Similarity=0.152 Sum_probs=259.8
Q ss_pred CceEEEEeccc---ccchhccchhhhcCCeEEEEE-EEeCCHHHHHHHHHHHhhhcCCcc--ccccCcchhhhhcC----
Q 018445 2 APRIAILGAGI---FVKTQYIPRLAEISDLVSLKF-IWSRSEESAKSAAEVARKHFADVE--CVWGDNGLEQIIKE---- 71 (355)
Q Consensus 2 ~~rigiiG~G~---~~~~~~~~~l~~~~~~~~vva-i~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ell~~---- 71 (355)
++||||||+|. ||.. |++++...++ ++|++ +||+++++++.+++ ++ +++ ..| +|+++||++
T Consensus 12 ~~rvgiiG~G~~~~ig~~-h~~~~~~~~~-~~lva~v~d~~~~~a~~~a~---~~--g~~~~~~~--~~~~~ll~~~~~~ 82 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYI-HRCAALRDNT-FVLVAGAFDIDPIRGSAFGE---QL--GVDSERCY--ADYLSMFEQEARR 82 (398)
T ss_dssp CEEEEEEECCTTCSSHHH-HHHHHHGGGS-EEEEEEECCSSHHHHHHHHH---HT--TCCGGGBC--SSHHHHHHHHTTC
T ss_pred cceEEEEcCCccchhHHH-HHHHHhhCCC-eEEEEEEeCCCHHHHHHHHH---Hh--CCCcceee--CCHHHHHhccccc
Confidence 37999999999 9985 8999888776 99998 89999999999887 44 553 344 999999997
Q ss_pred -CCccEEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHH
Q 018445 72 -DSILGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKK 150 (355)
Q Consensus 72 -~~~D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~ 150 (355)
+++|+|+|+||+..|++++++||++|||||||||++.|++|+++|++++++ +|+.++|++++||.|.++++|+
T Consensus 83 ~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~------~g~~~~v~~~~r~~p~~~~~k~ 156 (398)
T 3dty_A 83 ADGIQAVSIATPNGTHYSITKAALEAGLHVVCEKPLCFTVEQAENLRELSHK------HNRIVGVTYGYAGHQLIEQARE 156 (398)
T ss_dssp TTCCSEEEEESCGGGHHHHHHHHHHTTCEEEECSCSCSCHHHHHHHHHHHHH------TTCCEEECCGGGGSHHHHHHHH
T ss_pred CCCCCEEEECCCcHHHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHH------cCCeEEEEecccCCHHHHHHHH
Confidence 679999999999999999999999999999999999999999999999999 5999999999999999999999
Q ss_pred HHHH--hCCeeEEEEEEeeccCCCCC---ccCcccccc--cc--CccccchhhHHHHHHHHH-hCCcceeEEEeecccCC
Q 018445 151 LIAE--IGDMMSVQVIVEGSMNSSNP---YFSSSWRRN--FT--GGFILDMGVHFIAGLRMI-TGCEVVSVSAITSHIDK 220 (355)
Q Consensus 151 ~i~~--iG~i~~v~~~~~~~~~~~~~---~~~~~w~~~--~~--gg~l~d~g~H~id~~~~l-~G~~~~~V~a~~~~~~~ 220 (355)
+|++ ||+|+.+++.+...+..... +....|+.+ .+ ||+|.|+|+|.+|+++|| +|.+|++|++......+
T Consensus 157 ~i~~G~iG~i~~v~~~~~~~~~~~~~~~~~~~~~Wr~~~~~~G~gG~l~d~g~H~idl~~~l~~G~~~~~V~a~~~~~~~ 236 (398)
T 3dty_A 157 MIAAGELGDVRMVHMQFAHGFHSAPVEAQSQATQWRVDPRQAGPSYVLGDVGTHPLYLSEVMLPDLKIKRLMCSRQSFVA 236 (398)
T ss_dssp HHHTTTTCSEEEEEEEEECCTTCC------------------CCCSHHHHTTHHHHHHHHHHCTTCCEEEEEEEEECSSG
T ss_pred HHhcCCCCCeEEEEEEEecccccCccccccCCCCcccCHHHcCCccHHHHHHHHHHHHHHHHhcCCCcEEEEEEeEeecC
Confidence 9996 99999999988654432211 234568765 33 489999999999999999 99889999998876544
Q ss_pred CC-CCCceEEEEEEecCCcEEEEEEEEecCCC--CeEEEEEeeeeEEEEecCCCCCCCceeEEEeCCCCccee-------
Q 018445 221 TL-PPPDNISSNFQLENGCSGVFVMVVSSRSP--KIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGADGQSKS------- 290 (355)
Q Consensus 221 ~~-~~~d~~~~~l~~~~G~~~~~~~~~~~~~~--~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~------- 290 (355)
.. +.+|++.++++|+||++++++.++..+.. ..+++|+|++|++.++..... .+.+...++....
T Consensus 237 ~~~~~~D~~~~~l~~~~G~~~~~~~s~~~~~~~~~~~~~i~G~~G~i~~~~~~~~-----~l~~~~~~~~~~~~~~~~~~ 311 (398)
T 3dty_A 237 SRAPLEDNAYTLMEYEGGAMGMVWSSAVNAGSMHGQKIRVIGSRASLEWWDERPN-----QLSFEVQGQPAQILERGMGY 311 (398)
T ss_dssp GGTTSCSEEEEEEEETTSCEEEEEEESCCTTCSCCEEEEEEESSEEEEEETTSTT-----EEEEEETTSCEEEEETTCTT
T ss_pred CCCCcceEEEEEEEECCCCEEEEEEeccccCCCCCcEEEEEecceEEEEecCCCC-----EEEEEECCCCcEEEEcCCCC
Confidence 43 48999999999999999999999987654 379999999999999864321 1222222221110
Q ss_pred ---------eecCC------CChHHHHHHHHHHHH---HhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHchhcCCcEEec
Q 018445 291 ---------MFYPF------SGVTEELKAFIHDIS---EAKKGINHVPEPRSSFLEGARDVALLEAMLESGSKQGALVHV 352 (355)
Q Consensus 291 ---------~~~~~------~~~~~~~~~f~~~i~---~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~v~~ 352 (355)
...+. +.|..++++|+++|+ +|.... .+..+.++++|+++++++++|+++| .++|++|.+
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~~~~g~~~~-p~~~~~~~~~dg~~~~~i~eA~~~S-~~~g~~v~~ 389 (398)
T 3dty_A 312 LHPNALIDDRIGGGHPEGLFEAWANLYYRFALAMDATDRSDTQA-LSAVRYPGIDAGVEGVRWVERCVLS-ADNDSIWVA 389 (398)
T ss_dssp SCGGGTTTCCSCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCHHH-HHTCCCCCHHHHHHHHHHHHHHHHH-HHTTTCCEE
T ss_pred CChhhhhhcccCCCCcCcHHHHHHHHHHHHHHHHHhhhCCCCCc-cccCCCCCHHHHHHHHHHHHHHHHH-HhcCCeEEE
Confidence 00111 246789999999999 454000 0001589999999999999999999 588888776
Q ss_pred c
Q 018445 353 K 353 (355)
Q Consensus 353 ~ 353 (355)
+
T Consensus 390 ~ 390 (398)
T 3dty_A 390 Y 390 (398)
T ss_dssp S
T ss_pred e
Confidence 5
No 17
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=100.00 E-value=1.3e-55 Score=402.33 Aligned_cols=316 Identities=19% Similarity=0.191 Sum_probs=266.2
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
+||||||+|.+|.. |++.|.+.++ ++|+++||+++++++.+++ ++ +++..| +|+++|++++++|+|+|+||
T Consensus 6 ~~igiiG~G~~g~~-~~~~l~~~~~-~~l~av~d~~~~~~~~~~~---~~--~~~~~~--~~~~~ll~~~~~D~V~i~tp 76 (330)
T 3e9m_A 6 IRYGIMSTAQIVPR-FVAGLRESAQ-AEVRGIASRRLENAQKMAK---EL--AIPVAY--GSYEELCKDETIDIIYIPTY 76 (330)
T ss_dssp EEEEECSCCTTHHH-HHHHHHHSSS-EEEEEEBCSSSHHHHHHHH---HT--TCCCCB--SSHHHHHHCTTCSEEEECCC
T ss_pred EEEEEECchHHHHH-HHHHHHhCCC-cEEEEEEeCCHHHHHHHHH---Hc--CCCcee--CCHHHHhcCCCCCEEEEcCC
Confidence 69999999999986 9999998876 9999999999999998887 34 444444 89999999999999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH--hCCeeE
Q 018445 83 GQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--IGDMMS 160 (355)
Q Consensus 83 ~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--iG~i~~ 160 (355)
+..|++++++|+++||||+||||++.+++|+++|.+++++ +|+.+++++++||+|.++++|++|++ ||+|+.
T Consensus 77 ~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~------~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~ 150 (330)
T 3e9m_A 77 NQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQE------QGVFLMEAQKSVFLPITQKVKATIQEGGLGEILW 150 (330)
T ss_dssp GGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHH------TTCCEEECCSGGGCHHHHHHHHHHHTTTTCSEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHH------cCCeEEEEEhhhhCHHHHHHHHHHhCCCCCCeEE
Confidence 9999999999999999999999999999999999999999 59999999999999999999999996 999999
Q ss_pred EEEEEeeccCCCCCccCcccccc--ccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCceEEEEEEecCCc
Q 018445 161 VQVIVEGSMNSSNPYFSSSWRRN--FTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISSNFQLENGC 238 (355)
Q Consensus 161 v~~~~~~~~~~~~~~~~~~w~~~--~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~G~ 238 (355)
+++.+..++ .....|+.+ .+||.++|+|+|.+|+++|++|.+|++|++...... .+.+|++.++++|+||.
T Consensus 151 i~~~~~~~~-----~~~~~w~~~~~~ggG~l~d~g~H~id~~~~l~G~~~~~v~a~~~~~~--~~~~d~~~~~l~~~~G~ 223 (330)
T 3e9m_A 151 VQSVTAYPN-----VDHIPWFYSREAGGGALHGSGSYPLQYLQYVLGKEIQEVTGTATYQQ--GATDSQCNLALKFAEGT 223 (330)
T ss_dssp EEEEEEESC-----CTTCGGGGCTTTTCSHHHHHSHHHHHHHHHHHTCCEEEEEEEEEECS--SSCEEEEEEEEEETTTE
T ss_pred EEEEecccC-----CCCcCcccCcccCCCHHHHhhHHHHHHHHHHhCCCceEEEEEEEeCC--CCcceEEEEEEEECCCC
Confidence 999986543 122456654 789999999999999999999988999999874332 35789999999999999
Q ss_pred EEEEEEEEecCCCCeEEEEEeeeeEEEEecCCCCCCCceeEEEeCCCCcc-eeeecCCCChHHHHHHHHHHHHHhhcCCC
Q 018445 239 SGVFVMVVSSRSPKIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGADGQS-KSMFYPFSGVTEELKAFIHDISEAKKGIN 317 (355)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~f~~~i~~~~~~~~ 317 (355)
++++..+|..+. ..+++|+|++|++.++.... ...+.+...++.. .........|..++++|+++|+++..
T Consensus 224 ~~~~~~s~~~~~-~~~~~i~G~~G~i~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~e~~~f~~~i~~g~~--- 295 (330)
T 3e9m_A 224 LGNIFINVGLKI-PSEMTICGTKGQIVIPNFWK----TDCAYYTDAQGNTVKWSEQFTSEFTYEINHVNQCLQDKKL--- 295 (330)
T ss_dssp EEEEEEEESCCC-CCEEEEEETTEEEEEETTTT----CSEEEEECSSSCEEEEECCCSCHHHHHHHHHHHHHHTTCS---
T ss_pred EEEEEEEeccCC-CCEEEEEeCceEEEECCCCC----CCEEEEEECCCceEEEEEcCCcccHHHHHHHHHHHHcCCC---
Confidence 999999998764 46899999999999975432 1234454444443 22222233499999999999998861
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHchhcCCcEEe
Q 018445 318 HVPEPRSSFLEGARDVALLEAMLESGSKQGALVH 351 (355)
Q Consensus 318 ~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~v~ 351 (355)
..+.++++|+++++++++++++| ...+++..
T Consensus 296 --~~~~~~~~d~l~~~~i~~ai~~s-~~~~~~~~ 326 (330)
T 3e9m_A 296 --TSPVMTKELTIATVKIVESFYQE-WFDNEGHH 326 (330)
T ss_dssp --SCSSSCHHHHHHHHHHHHHHHHH-HTCCC---
T ss_pred --CCCCCCHHHHHHHHHHHHHHHHh-cCCCcccc
Confidence 15788999999999999999999 57887764
No 18
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=100.00 E-value=4.6e-56 Score=409.29 Aligned_cols=314 Identities=18% Similarity=0.212 Sum_probs=262.8
Q ss_pred CCceEEEEecccccchhccchhh-hcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCc-cccccCcchhhhhcCCCccEEE
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLA-EISDLVSLKFIWSRSEESAKSAAEVARKHFADV-ECVWGDNGLEQIIKEDSILGVA 78 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~-~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ell~~~~~D~V~ 78 (355)
|++||||||+|.||.. |++.+. ..++ ++|+++||+++++++.+++ ++ ++ ...| +|+++|++++++|+|+
T Consensus 22 ~~~rvgiIG~G~~g~~-~~~~l~~~~~~-~~lvav~d~~~~~~~~~a~---~~--g~~~~~~--~~~~~ll~~~~~D~V~ 92 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSD-HLRRLANTVSG-VEVVAVCDIVAGRAQAALD---KY--AIEAKDY--NDYHDLINDKDVEVVI 92 (357)
T ss_dssp CCEEEEEECCSHHHHH-HHHHHHHTCTT-EEEEEEECSSTTHHHHHHH---HH--TCCCEEE--SSHHHHHHCTTCCEEE
T ss_pred CeeeEEEECCcHHHHH-HHHHHHhhCCC-cEEEEEEeCCHHHHHHHHH---Hh--CCCCeee--CCHHHHhcCCCCCEEE
Confidence 4679999999999986 999998 6666 9999999999999999887 34 32 2333 8999999999999999
Q ss_pred EecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeE-EEEecccCchHHHHHHHHHHH--h
Q 018445 79 VVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIW-AVAENYRFEPAFVECKKLIAE--I 155 (355)
Q Consensus 79 I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~-~v~~~~r~~p~~~~~k~~i~~--i 155 (355)
|+||+..|++++++|+++|||||||||++.+++|+++|++++++. |+.+ +|++++||.|.++++|++|++ |
T Consensus 93 i~tp~~~h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~------g~~~~~v~~~~R~~p~~~~~k~~i~~g~i 166 (357)
T 3ec7_A 93 ITASNEAHADVAVAALNANKYVFCEKPLAVTAADCQRVIEAEQKN------GKRMVQIGFMRRYDKGYVQLKNIIDSGEI 166 (357)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHH------TSCCEEEECGGGGSHHHHHHHHHHHHTTT
T ss_pred EcCCcHHHHHHHHHHHHCCCCEEeecCccCCHHHHHHHHHHHHHh------CCeEEEEeecccCCHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999999994 8766 999999999999999999997 9
Q ss_pred CCeeEEEEEEeeccCCCCCccCccccccccCccccchhhHHHHHHHHHhCCcceeEEEeecccC-CCCCCCceEEEEEEe
Q 018445 156 GDMMSVQVIVEGSMNSSNPYFSSSWRRNFTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHID-KTLPPPDNISSNFQL 234 (355)
Q Consensus 156 G~i~~v~~~~~~~~~~~~~~~~~~w~~~~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~-~~~~~~d~~~~~l~~ 234 (355)
|+|..+++.+..+. .+..|+ +||.++|+|+|.+|+++||+|.+|++|++...... ...+.+|++.++++|
T Consensus 167 G~i~~v~~~~~~~~------~p~~w~---ggg~l~d~g~H~iDl~~~l~G~~~~~V~a~~~~~~~~~~~~~D~~~~~l~~ 237 (357)
T 3ec7_A 167 GQPLMVHGRHYNAS------TVPEYK---TPQAIYETLIHEIDVMHWLLNEDYKTVKVYFPRQSSLVTTLRDPQLVVMET 237 (357)
T ss_dssp CSEEEEEEEEECSC------CCTTCC---TTHHHHTTHHHHHHHHHHHHTCCEEEEEEECCSCCTTCCSSCCSEEEEEEE
T ss_pred CCeEEEEEEEeCCC------CCcccc---CCchhhhcccHHHHHHHHHcCCCceEEEEEEecccccCCCcceeEEEEEEE
Confidence 99999998654221 123465 78899999999999999999977999999875432 224578999999999
Q ss_pred cCCcEEEEEEEEecCCC-CeEEEEEeeeeEEEEecCCCCCCCceeEEEeCCCCcceeee-----cCCCChHHHHHHHHHH
Q 018445 235 ENGCSGVFVMVVSSRSP-KIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGADGQSKSMF-----YPFSGVTEELKAFIHD 308 (355)
Q Consensus 235 ~~G~~~~~~~~~~~~~~-~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~f~~~ 308 (355)
+||+++++..+|..+.. ..+++|+|++|++.++.... +.+....+...... ...++|..++++|+++
T Consensus 238 ~~G~~~~~~~s~~~~~~~~~~~~i~G~~G~i~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~ 310 (357)
T 3ec7_A 238 TSGINIVVEVFVNCQYGYDIHCDVTGEKGMAELPTVAS-------AAVRKAAKYSTDILVDWKQRFIDAYDIEFQDFFDR 310 (357)
T ss_dssp TTCCEEEEEEETTCSSCCEEEEEEEESSEEEECCCCCC-------CEEEETTEEEEECCCCGGGTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEEeccCCCCCcEEEEEECCcEEEecCCCc-------EEEEcCCCcccccCCcchhhhhHHHHHHHHHHHHH
Confidence 99999999999877544 46899999999999984332 22222221111110 1124688999999999
Q ss_pred HHHh-hcCCCCCCCCCCCHHHHHHHHHHHHHHHHchhcCCcEEecc
Q 018445 309 ISEA-KKGINHVPEPRSSFLEGARDVALLEAMLESGSKQGALVHVK 353 (355)
Q Consensus 309 i~~~-~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~v~~~ 353 (355)
|+++ . ++.++++|+++++++++|+++| +++|++|.|+
T Consensus 311 i~~g~~-------~~~~~~~d~~~~~~i~~a~~~S-a~~G~~V~l~ 348 (357)
T 3ec7_A 311 LNAGLP-------PAGPTSWDGYLAAVTADACVKS-QETGNTEIVE 348 (357)
T ss_dssp HHTTCC-------CCSSCHHHHHHHHHHHHHHHHH-HHHSSCEECC
T ss_pred HHcCCC-------CCCCCHHHHHHHHHHHHHHHHH-HHhCCeEEEe
Confidence 9999 7 8889999999999999999999 6999999985
No 19
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=100.00 E-value=2.3e-56 Score=411.52 Aligned_cols=323 Identities=19% Similarity=0.261 Sum_probs=267.5
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
++||||||+|.+|.. |++.+.+.+++++|+++||+++++++.+++ ++ ++ ..| +|+++|++++++|+|+|+|
T Consensus 13 ~~rvgiiG~G~~g~~-~~~~l~~~~~~~~lvav~d~~~~~~~~~~~---~~--~~-~~~--~~~~~ll~~~~~D~V~i~t 83 (354)
T 3q2i_A 13 KIRFALVGCGRIANN-HFGALEKHADRAELIDVCDIDPAALKAAVE---RT--GA-RGH--ASLTDMLAQTDADIVILTT 83 (354)
T ss_dssp CEEEEEECCSTTHHH-HHHHHHHTTTTEEEEEEECSSHHHHHHHHH---HH--CC-EEE--SCHHHHHHHCCCSEEEECS
T ss_pred cceEEEEcCcHHHHH-HHHHHHhCCCCeEEEEEEcCCHHHHHHHHH---Hc--CC-cee--CCHHHHhcCCCCCEEEECC
Confidence 479999999999986 899999883339999999999999999887 34 55 333 8999999999999999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH--hCCee
Q 018445 82 AGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--IGDMM 159 (355)
Q Consensus 82 p~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--iG~i~ 159 (355)
|+..|++++++|+++||||+||||++.+++++++|.+++++ +|+.+++++++||+|.++++|++|++ ||+|.
T Consensus 84 p~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~------~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~ 157 (354)
T 3q2i_A 84 PSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADK------AKKHLFVVKQNRRNATLQLLKRAMQEKRFGRIY 157 (354)
T ss_dssp CGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHH------HTCCEEECCGGGGSHHHHHHHHHHHTTTTCSEE
T ss_pred CcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHH------hCCeEEEEEcccCCHHHHHHHHHHhcCCCCceE
Confidence 99999999999999999999999999999999999999999 49999999999999999999999997 99999
Q ss_pred EEEEEEeeccCCCCCcc-Ccccccc--ccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCceEEEEEEecC
Q 018445 160 SVQVIVEGSMNSSNPYF-SSSWRRN--FTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISSNFQLEN 236 (355)
Q Consensus 160 ~v~~~~~~~~~~~~~~~-~~~w~~~--~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~ 236 (355)
.+++.+.. ..+..++ ..+|+.+ .+||.++|+|+|.+|+++|++| +|++|++.........+.+|++.++++|+|
T Consensus 158 ~v~~~~~~--~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G-~~~~v~a~~~~~~~~~~~~d~~~~~l~~~~ 234 (354)
T 3q2i_A 158 MVNVNVFW--TRPQEYYDAAGWRGTWEFDGGAFMNQASHYVDLLDWLIG-PVESVQAYTATLARNIEVEDTGTVSVKWRS 234 (354)
T ss_dssp EEEEEEEC--BCCHHHHHTSTTTTCTTTTCCCCCCCTHHHHHHHHHHHC-CEEEEEEEEECSSSSSSSCSEEEEEEEETT
T ss_pred EEEEEEEE--ecCchhccccCccccccCCCchhhhhhhHHHHHHHHhcC-CceEEEEEeeccCCCCCccceeEEEEEECC
Confidence 99987642 2222222 2357654 6799999999999999999999 999999988765555678999999999999
Q ss_pred CcEEEEEEEEecCCC--CeEEEEEeeeeEEEEecCCCCCCCceeEEEeCC-CCcce----eee----cCCCChHHHHHHH
Q 018445 237 GCSGVFVMVVSSRSP--KIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGA-DGQSK----SMF----YPFSGVTEELKAF 305 (355)
Q Consensus 237 G~~~~~~~~~~~~~~--~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~----~~~~~~~~~~~~f 305 (355)
|.+++++.+|..+.. ..+++|+|++|++.++..... ......... ..... ... ....++..++++|
T Consensus 235 G~~~~~~~s~~~~~~~~~~~~~i~G~~G~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 311 (354)
T 3q2i_A 235 GALGSMNVTMLTYPKNLEGSITILGEKGSVRVGGVAVN---EIQHWEFSEPHAMDEEIKDASYATTSVYGFGHPLYYDNV 311 (354)
T ss_dssp SCEEEEEEESBCSSSCCEEEEEEEETTEEEEEETTTTC---EEEEEEESSCCGGGGGHHHHC-------CCSHHHHHHHH
T ss_pred CCEEEEEEEeeecCCCCCcEEEEEeccEEEEECCcccc---cceeeeecccCCccccccccccCCcccCCccHHHHHHHH
Confidence 999999999987543 478999999999999853221 111111111 11000 000 1112568999999
Q ss_pred HHHHHHhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHchhcCCcEEecc
Q 018445 306 IHDISEAKKGINHVPEPRSSFLEGARDVALLEAMLESGSKQGALVHVK 353 (355)
Q Consensus 306 ~~~i~~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~v~~~ 353 (355)
+++|+++. ++.++++|+++++++++|+++| +++|++|.|+
T Consensus 312 ~~~i~~~~-------~~~~~~~d~~~~~~i~~a~~~S-a~~g~~V~l~ 351 (354)
T 3q2i_A 312 IKTMRGEA-------TPETDGREGLKSLELLIAMYLS-ARDGRRVSLP 351 (354)
T ss_dssp HHHHTTSC-------CCSSBHHHHHHHHHHHHHHHHH-HHHTSCEESC
T ss_pred HHHHhcCC-------CCCCCHHHHHHHHHHHHHHHHH-HhcCCeEeCC
Confidence 99999987 8899999999999999999999 6999999986
No 20
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=100.00 E-value=4.7e-56 Score=408.16 Aligned_cols=313 Identities=18% Similarity=0.218 Sum_probs=264.2
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
++||||||+|.||...|++.|.+.++ ++|+++||+++++++.+++ ++ +++. | +|++||++++++|+|+|+|
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~~-~~l~av~d~~~~~~~~~a~---~~--g~~~-~--~~~~~ll~~~~~D~V~i~t 97 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEPL-TEVTAIASRRWDRAKRFTE---RF--GGEP-V--EGYPALLERDDVDAVYVPL 97 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCTT-EEEEEEEESSHHHHHHHHH---HH--CSEE-E--ESHHHHHTCTTCSEEEECC
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCCC-eEEEEEEcCCHHHHHHHHH---Hc--CCCC-c--CCHHHHhcCCCCCEEEECC
Confidence 36999999999997458999998876 9999999999999999887 34 5543 3 8999999999999999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH--hCCee
Q 018445 82 AGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--IGDMM 159 (355)
Q Consensus 82 p~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--iG~i~ 159 (355)
|+..|++++++||++||||+||||++.+++|+++|++++++ +|+.+++++++||+|.++++|++|++ ||+|+
T Consensus 98 p~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~------~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG~i~ 171 (350)
T 3rc1_A 98 PAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARE------RGLLLMENFMFLHHPQHRQVADMLDEGVIGEIR 171 (350)
T ss_dssp CGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHH------TTCCEEEECGGGGCTHHHHHHHHHHTTTTCSEE
T ss_pred CcHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHH------hCCEEEEEecccCCHHHHHHHHHHhcCCCCCeE
Confidence 99999999999999999999999999999999999999999 59999999999999999999999996 99999
Q ss_pred EEEEEEeeccCCCCCccCcccccc--ccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCceEEEEEEecCC
Q 018445 160 SVQVIVEGSMNSSNPYFSSSWRRN--FTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISSNFQLENG 237 (355)
Q Consensus 160 ~v~~~~~~~~~~~~~~~~~~w~~~--~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~G 237 (355)
.+++.+..+. ....+|+.+ .+||.++|+|+|.+|+++||+|.+|+.|++..... ...+.+|.+.++++|+||
T Consensus 172 ~v~~~~~~~~-----~~~~~wr~~~~~gGG~l~d~g~H~ld~~~~l~G~~~~~v~a~~~~~-~~~~~d~~~~~~l~~~~G 245 (350)
T 3rc1_A 172 SFAASFTIPP-----KPQGDIRYQADVGGGALLDIGVYPIRAAGLFLGADLEFVGAVLRHE-RDRDVVVGGNALLTTRQG 245 (350)
T ss_dssp EEEEEEECCC-----CCTTCGGGCTTTTCHHHHHTTHHHHHHHHHHHCTTCEEEEEEEEEE-TTTTEEEEEEEEEECTTC
T ss_pred EEEEEEecCC-----CCccccccCcccCccHHHHHHHHHHHHHHHHcCCCcEEEEEEEEeC-CCCCccceEEEEEEECCC
Confidence 9999876432 123456654 78999999999999999999998899999976542 234567888999999999
Q ss_pred cEEEEEEEEecCCCCeEEEEEeeeeEEEEecCCCCCC-CceeEEEeCCCCcceeeecCCCChHHHHHHHHHHHHHhhcCC
Q 018445 238 CSGVFVMVVSSRSPKIFWRVVGMKGTLQVERGNQDGR-HGYLVTQYGADGQSKSMFYPFSGVTEELKAFIHDISEAKKGI 316 (355)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~~~~~~ 316 (355)
.++++.++|..+ ...+++|+|++|++.++....... ....+.....++.........++|..++++|+++|+++.
T Consensus 246 ~~~~~~~s~~~~-~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~f~~~i~~g~--- 321 (350)
T 3rc1_A 246 VTAQLTFGMEHA-YTNNYEFRGSTGRLWMNRVFTPPATYQPVVHIERQDHAEQFVLPAHDQFAKSIRAFAQAVLSGE--- 321 (350)
T ss_dssp CEEEEEEESSSC-CEEEEEEEESSCEEEEESCSCCCTTCCCEEEEEETTEEEEEECCCCCHHHHHHHHHHHHHHHCC---
T ss_pred CEEEEEEecCCC-CCCEEEEEeCCEEEEECcccCCCCCCceEEEEecCCceEEEEcCCccHHHHHHHHHHHHHHcCC---
Confidence 999999999753 346899999999999997543221 122344443333322333345679999999999999997
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHch
Q 018445 317 NHVPEPRSSFLEGARDVALLEAMLESG 343 (355)
Q Consensus 317 ~~~~~~~~~~~d~~~~~~i~~a~~~S~ 343 (355)
++.++++|+++++++++++++|+
T Consensus 322 ----~~~~~~~dal~~~~ii~ai~~Sa 344 (350)
T 3rc1_A 322 ----HPREWSEDSLRQASLVDAVRTGA 344 (350)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHHS
T ss_pred ----CCCCCHHHHHHHHHHHHHHHHHh
Confidence 77899999999999999999995
No 21
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.6e-55 Score=413.41 Aligned_cols=330 Identities=18% Similarity=0.243 Sum_probs=259.6
Q ss_pred CceEEEEeccc---ccchhccchhhhcCCeEEEEE-EEeCCHHHHHHHHHHHhhhcCCcc--ccccCcchhhhhcC----
Q 018445 2 APRIAILGAGI---FVKTQYIPRLAEISDLVSLKF-IWSRSEESAKSAAEVARKHFADVE--CVWGDNGLEQIIKE---- 71 (355)
Q Consensus 2 ~~rigiiG~G~---~~~~~~~~~l~~~~~~~~vva-i~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ell~~---- 71 (355)
++||||||+|. ||.. |++++...++ ++|++ +||+++++++++++ ++ +++ ..| +|+++|+++
T Consensus 37 ~~rvgiiG~G~~~~ig~~-h~~~~~~~~~-~~lva~v~d~~~~~a~~~a~---~~--g~~~~~~~--~~~~~ll~~~~~~ 107 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAV-HRIAARLDDH-YELVAGALSSTPEKAEASGR---EL--GLDPSRVY--SDFKEMAIREAKL 107 (417)
T ss_dssp CEEEEEESCC--CHHHHH-HHHHHHHTSC-EEEEEEECCSSHHHHHHHHH---HH--TCCGGGBC--SCHHHHHHHHHHC
T ss_pred cceEEEEcCCCchHHHHH-HHHHHhhCCC-cEEEEEEeCCCHHHHHHHHH---Hc--CCCccccc--CCHHHHHhccccc
Confidence 37999999998 8975 8998887776 99997 99999999999887 34 554 344 999999998
Q ss_pred -CCccEEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHH
Q 018445 72 -DSILGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKK 150 (355)
Q Consensus 72 -~~~D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~ 150 (355)
+++|+|+|+||+..|++++++||++|||||||||++.+++|+++|++++++ +|+.++|++++||.|.++++|+
T Consensus 108 ~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~------~g~~~~v~~~~R~~p~~~~~k~ 181 (417)
T 3v5n_A 108 KNGIEAVAIVTPNHVHYAAAKEFLKRGIHVICDKPLTSTLADAKKLKKAADE------SDALFVLTHNYTGYPMVRQARE 181 (417)
T ss_dssp TTCCSEEEECSCTTSHHHHHHHHHTTTCEEEEESSSCSSHHHHHHHHHHHHH------CSSCEEEECGGGGSHHHHHHHH
T ss_pred CCCCcEEEECCCcHHHHHHHHHHHhCCCeEEEECCCcCCHHHHHHHHHHHHH------cCCEEEEEecccCCHHHHHHHH
Confidence 889999999999999999999999999999999999999999999999999 5999999999999999999999
Q ss_pred HHHH--hCCeeEEEEEEeeccCCCCC----ccCcccccc--cc--CccccchhhHHHHHHHHHhCCcceeEEEeecccCC
Q 018445 151 LIAE--IGDMMSVQVIVEGSMNSSNP----YFSSSWRRN--FT--GGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDK 220 (355)
Q Consensus 151 ~i~~--iG~i~~v~~~~~~~~~~~~~----~~~~~w~~~--~~--gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~ 220 (355)
+|++ ||+|+.+++.+...|..... .....|+.+ .+ ||++.|+|+|.+|+++|++|.+|++|++......+
T Consensus 182 ~i~~G~iG~i~~v~~~~~~~~~~~~~~~~~~~~~~Wr~~~~~~G~gG~l~d~g~H~lDl~~~l~G~~~~~V~a~~~~~~~ 261 (417)
T 3v5n_A 182 MIENGDIGAVRLVQMEYPQDWLTENIEQSGQKQAAWRTDPARSGAGGSTGDIGTHAYNLGCFVSGLELEELAADLDSFVG 261 (417)
T ss_dssp HHHTTTTCSEEEEEEEEECCTTSCC--------------------CCHHHHTHHHHHHHHHHHHCCCEEEEEEEEECCST
T ss_pred HHhcCCCCCeEEEEEEEecccccCccccccCCCcCcccCHHHcCCccHHHHHHHHHHHHHHHhcCCCceEEEEEEEecCC
Confidence 9996 99999999998655433221 233568765 33 59999999999999999999889999998877666
Q ss_pred CCCCCceEEEEEEecC----CcEEEEEEEEecCCC--CeEEEEEeeeeEEEEecCCCCCCCceeEEEeCCCCccee----
Q 018445 221 TLPPPDNISSNFQLEN----GCSGVFVMVVSSRSP--KIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGADGQSKS---- 290 (355)
Q Consensus 221 ~~~~~d~~~~~l~~~~----G~~~~~~~~~~~~~~--~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~---- 290 (355)
..+.+|++.++++|+| |+++++..++..+.. ..+++|+|++|++.++..... .+.....++....
T Consensus 262 ~~~~~D~~~~~l~~~~~~~~G~~~~~~~s~~~~~~~~~~~~~i~Gt~G~l~~~~~~~~-----~l~~~~~~~~~~~~~~~ 336 (417)
T 3v5n_A 262 GRQLDDNAHVLMRFREKDGTRAKGMLWCSQVAPGHENGLMVRVYGTKGGLEWTQKDPN-----YLWYTPFGEPKRLLTRA 336 (417)
T ss_dssp TCCSCCEEEEEEEECCBTTBCCEEEEEEESCCTTCSSCCEEEEEESSEEEEEETTSTT-----EEEEEETTSCEEEEETT
T ss_pred CCCCceEEEEEEEECCCCCCCeEEEEEEEecccCCCCCeEEEEEecceEEEEccCCCC-----eEEEEeCCCCcEEEecC
Confidence 6678999999999999 999999999987643 368999999999999864321 1222222211100
Q ss_pred ------------eecC--C----CChHHHHHHHHHHHHHhhcCCCCC-CCCCCCHHHHHHHHHHHHHHHHchhcC-CcEE
Q 018445 291 ------------MFYP--F----SGVTEELKAFIHDISEAKKGINHV-PEPRSSFLEGARDVALLEAMLESGSKQ-GALV 350 (355)
Q Consensus 291 ------------~~~~--~----~~~~~~~~~f~~~i~~~~~~~~~~-~~~~~~~~d~~~~~~i~~a~~~S~~~~-g~~v 350 (355)
..++ . +.|..++++|+++|+++..+.+.+ ....++++|+++++++++|+++|+ ++ |+||
T Consensus 337 ~~~~~~~~~~~~~~~~g~~~~~~~~f~~~~~~f~~ai~~~~~G~~p~~~~~~~~~~dg~~~~~i~~A~~~S~-~~~g~~V 415 (417)
T 3v5n_A 337 GAGASPAAARVSRIPSGHPEGYLEGFANIYSEAARAIYAKRNGGKADPSVIYPTIDDGMRGMTFVDACVRSS-ERNGAWI 415 (417)
T ss_dssp STTCCHHHHTTCCSCTTSCCCHHHHHHHHHHHHHHHHHTTC----CCTTCCCCCHHHHHHHHHHHHHHHHHH-HTTSCCB
T ss_pred CCccCchhhhhccCCCCCCccHHHHHHHHHHHHHHHHHhhccCCCCcccCCCCCHHHHHHHHHHHHHHHHHH-hcCCCce
Confidence 0011 1 235789999999999732111000 123689999999999999999995 66 9998
Q ss_pred ec
Q 018445 351 HV 352 (355)
Q Consensus 351 ~~ 352 (355)
.|
T Consensus 416 ~v 417 (417)
T 3v5n_A 416 KV 417 (417)
T ss_dssp C-
T ss_pred eC
Confidence 75
No 22
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=9.7e-56 Score=403.79 Aligned_cols=316 Identities=22% Similarity=0.278 Sum_probs=265.8
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEe
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
|++||||||+|.+|.. |++.+.+.++ ++|+++||+++++++.+++ ++ ++. | +|+++|++++++|+|+|+
T Consensus 2 m~~~vgiiG~G~~g~~-~~~~l~~~~~-~~l~av~d~~~~~~~~~~~---~~--~~~--~--~~~~~~l~~~~~D~V~i~ 70 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGKV-HAKAVSGNAD-ARLVAVADAFPAAAEAIAG---AY--GCE--V--RTIDAIEAAADIDAVVIC 70 (331)
T ss_dssp -CEEEEEECCSHHHHH-HHHHHHHCTT-EEEEEEECSSHHHHHHHHH---HT--TCE--E--CCHHHHHHCTTCCEEEEC
T ss_pred CceEEEEECCCHHHHH-HHHHHhhCCC-cEEEEEECCCHHHHHHHHH---Hh--CCC--c--CCHHHHhcCCCCCEEEEe
Confidence 7899999999999986 9999998876 9999999999999998887 34 554 4 899999999999999999
Q ss_pred cCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH--hCCe
Q 018445 81 LAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--IGDM 158 (355)
Q Consensus 81 tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--iG~i 158 (355)
||+..|++++++|+++||||+||||++.+++++++|.+++++ +|+.+++++++||+|.++++|++|++ ||+|
T Consensus 71 tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~------~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i 144 (331)
T 4hkt_A 71 TPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSD------TKAKLMVGFNRRFDPHFMAVRKAIDDGRIGEV 144 (331)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHH------TTCCEEECCGGGGCHHHHHHHHHHHTTTTCSE
T ss_pred CCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHH------cCCeEEEcccccCCHHHHHHHHHHHcCCCCce
Confidence 999999999999999999999999999999999999999999 59999999999999999999999997 9999
Q ss_pred eEEEEEEeeccCCCCCccCccccccccCccccchhhHHHHHHHHHhCCcceeEEEeecccCC----CCCCCceEEEEEEe
Q 018445 159 MSVQVIVEGSMNSSNPYFSSSWRRNFTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDK----TLPPPDNISSNFQL 234 (355)
Q Consensus 159 ~~v~~~~~~~~~~~~~~~~~~w~~~~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~----~~~~~d~~~~~l~~ 234 (355)
..+++.+..+.. + +..|. ..+||.++|+|+|.+|+++||+|.+|++|++....... ..+.+|++.++++|
T Consensus 145 ~~~~~~~~~~~~---~--~~~~~-~~~gG~l~d~g~H~ld~~~~l~G~~~~~v~a~~~~~~~~~~~~~~~~d~~~~~l~~ 218 (331)
T 4hkt_A 145 EMVTITSRDPSA---P--PVDYI-KRSGGIFRDMTIHDFDMARFLLGEEPVSVTATAAVLIDKAIGDAGDYDSVSVILQT 218 (331)
T ss_dssp EEEEEEEECSSC---C--CHHHH-HTTTCHHHHTHHHHHHHHHHHHCSCEEEEEEEEECCSCHHHHHTTCCSEEEEEEEE
T ss_pred EEEEEEecCCCC---C--chhhh-hcCCCeeehheehHHHHHHHHhCCCccEEEEEeccccccccccCCCcceEEEEEEE
Confidence 999987542211 1 12233 36899999999999999999999889999998865322 13467999999999
Q ss_pred cCCcEEEEEEEEecCCC-CeEEEEEeeeeEEEEecCCCCCCCceeEEEeCCCCcceeeec------CCCChHHHHHHHHH
Q 018445 235 ENGCSGVFVMVVSSRSP-KIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGADGQSKSMFY------PFSGVTEELKAFIH 307 (355)
Q Consensus 235 ~~G~~~~~~~~~~~~~~-~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~f~~ 307 (355)
+||.++++..+|..+.. ..+++|+|++|++.++.... ..+.....++....... ..++|..++++|++
T Consensus 219 ~~G~~~~~~~s~~~~~~~~~~~~i~G~~G~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 293 (331)
T 4hkt_A 219 ASGKQAIISNSRRATYGYDQRIEVHGSKGAVAAENQRP-----VSIEIATGDGYTRPPLHDFFMTRYTEAYANEIESFIA 293 (331)
T ss_dssp TTCCEEEEEEESCCTTCCEEEEEEEESSCEEEECCCCS-----CCEEEEETTEEEECCCCSSHHHHTHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEecccCCCCccEEEEEeCceEEEeccCCC-----ccEEEEcCCCcccCCCCccchhhhhHHHHHHHHHHHH
Confidence 99999999999987654 47899999999999986432 12333333222111111 12468899999999
Q ss_pred HHHHhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHchhcCCcEEec
Q 018445 308 DISEAKKGINHVPEPRSSFLEGARDVALLEAMLESGSKQGALVHV 352 (355)
Q Consensus 308 ~i~~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~v~~ 352 (355)
+|+++. ++.++++|+++++++++++++| +++|++|.|
T Consensus 294 ~i~~~~-------~~~~~~~d~~~~~~i~~a~~~S-~~~g~~V~l 330 (331)
T 4hkt_A 294 AIEKGA-------EIAPSGNDGLAALALADAAVRS-VAEKRQISI 330 (331)
T ss_dssp HHHTTC-------CCSSCHHHHHHHHHHHHHHHHH-HHHTBCEEC
T ss_pred HHhCCC-------CCCCCHHHHHHHHHHHHHHHHH-HhcCCeEec
Confidence 999998 8899999999999999999999 699999987
No 23
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=100.00 E-value=1.9e-55 Score=409.76 Aligned_cols=331 Identities=23% Similarity=0.240 Sum_probs=266.5
Q ss_pred CceEEEEe-cccccchhcc----chhhhcCCeEEEE---------EEEeCCHHHHHHHHHHHhhhcCCccccccCcchhh
Q 018445 2 APRIAILG-AGIFVKTQYI----PRLAEISDLVSLK---------FIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQ 67 (355)
Q Consensus 2 ~~rigiiG-~G~~~~~~~~----~~l~~~~~~~~vv---------ai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 67 (355)
+||||||| +|.+|...|+ +.+.+.+. +.++ ++||+++++++.+++ ++ +++..| +|+++
T Consensus 6 ~irigiiG~~G~~g~~~h~~~~~~~~~~~~~-~~l~~~~~~~~~~av~~~~~~~a~~~a~---~~--~~~~~~--~~~~~ 77 (383)
T 3oqb_A 6 RLGLIMNGVTGRMGLNQHLIRSIVAIRDQGG-VRLKNGDRIMPDPILVGRSAEKVEALAK---RF--NIARWT--TDLDA 77 (383)
T ss_dssp EEEEEEESTTSTHHHHTTTTTTHHHHHHHTS-EECTTSCEEEEEEEEECSSSHHHHHHHH---HT--TCCCEE--SCHHH
T ss_pred eeEEEEEeccchhhhhhhHHHHHHHHhhcCc-eeecCCcccceeeEEEcCCHHHHHHHHH---Hh--CCCccc--CCHHH
Confidence 47999999 9999975377 77776654 4443 899999999999887 44 554444 89999
Q ss_pred hhcCCCccEEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHH
Q 018445 68 IIKEDSILGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVE 147 (355)
Q Consensus 68 ll~~~~~D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~ 147 (355)
||+++++|+|+|+||+..|++++++||++|||||||||++.+++|+++|++++++ +|+.+++++++||.|.+++
T Consensus 78 ll~~~~iD~V~i~tp~~~h~~~~~~al~~Gk~V~~EKP~a~~~~~~~~l~~~a~~------~~~~~~v~~~~r~~p~~~~ 151 (383)
T 3oqb_A 78 ALADKNDTMFFDAATTQARPGLLTQAINAGKHVYCEKPIATNFEEALEVVKLANS------KGVKHGTVQDKLFLPGLKK 151 (383)
T ss_dssp HHHCSSCCEEEECSCSSSSHHHHHHHHTTTCEEEECSCSCSSHHHHHHHHHHHHH------TTCCEEECCGGGGSHHHHH
T ss_pred HhcCCCCCEEEECCCchHHHHHHHHHHHCCCeEEEcCCCCCCHHHHHHHHHHHHH------cCCeEEEEeccccCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 5999999999999999999
Q ss_pred HHHHHHH--hCCeeEEEEEEeeccC--CCCCccCcccccc--ccCccccchhhHHHHHHHHHhCCcceeEEEeecccCC-
Q 018445 148 CKKLIAE--IGDMMSVQVIVEGSMN--SSNPYFSSSWRRN--FTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDK- 220 (355)
Q Consensus 148 ~k~~i~~--iG~i~~v~~~~~~~~~--~~~~~~~~~w~~~--~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~- 220 (355)
+|++|++ ||+|+.+++.+..+.. .+.+..+.+|+.+ .+||.++|+|+|.+|+++|++| +|++|++......+
T Consensus 152 ~~~~i~~g~iG~i~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ggG~l~d~g~H~id~~~~l~G-~~~~v~a~~~~~~~~ 230 (383)
T 3oqb_A 152 IAFLRDSGFFGRILSVRGEFGYWVFEGGWQEAQRPSWNYRDEDGGGIILDMVCHWRYVLDNLFG-NVQSVVCIGNTDIPE 230 (383)
T ss_dssp HHHHHHTTTTSSEEEEEEEEECCCCCSSSSCCSSCGGGGCTTTTCCHHHHHHHHHHHHHHHHTC-CEEEEEEEEECSCSE
T ss_pred HHHHHHcCCCCCcEEEEEEeccccccccccccCCCCcccccccCCceeeehhhHHHHHHHHHcC-CCeEEEEEEeecccc
Confidence 9999997 9999999998753221 1122223467654 6899999999999999999999 89999998865432
Q ss_pred ---------CCCCCceEEEEEEecCCcEEEEEEEEecCCCC---eEEEEEeeeeEEEEecCCCCCCC--ceeEEEeCCCC
Q 018445 221 ---------TLPPPDNISSNFQLENGCSGVFVMVVSSRSPK---IFWRVVGMKGTLQVERGNQDGRH--GYLVTQYGADG 286 (355)
Q Consensus 221 ---------~~~~~d~~~~~l~~~~G~~~~~~~~~~~~~~~---~~~~i~G~~G~i~~~~~~~~~~~--~~~~~~~~~~~ 286 (355)
..+.+|++.++++|+||.+++++.+|..+... .+++|+|++|++.++........ ......+....
T Consensus 231 ~~~~~g~~~~~~~~D~~~~~l~~~~G~~~~~~~s~~~~~~~~~~~~~~i~Gt~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (383)
T 3oqb_A 231 RFDEQGKKYKATADDSAYATFQLEGGVIAHINMSWVTRVYRDDLVTFQVDGTHGSAVAGLSDCMIQARQATPRPVWNPDE 310 (383)
T ss_dssp EECTTSCEEECCSCCEEEEEEEETTTEEEEEEEESSCCCCSSSSEEEEEEESSEEEEECSSCEEEEEGGGCCCCCCCC--
T ss_pred cccCCCceeccccCCcEEEEEEeCCCCEEEEEEEeecccCCCCceEEEEEecccEEEEecccccccccCCCCccccCCCC
Confidence 13578999999999999999999999876432 58999999999998753210000 00000000000
Q ss_pred --------cceee---ecCCCChHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHchhcCCcEEeccCC
Q 018445 287 --------QSKSM---FYPFSGVTEELKAFIHDISEAKKGINHVPEPRSSFLEGARDVALLEAMLESGSKQGALVHVKKF 355 (355)
Q Consensus 287 --------~~~~~---~~~~~~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~v~~~~~ 355 (355)
.+... ....++|..++++|+++|+++. ++.++++|+++++++++|+++| +++|++|.+++|
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~ai~~g~-------~~~~~~~d~~~~~~i~~a~~~S-a~~g~~V~l~~~ 382 (383)
T 3oqb_A 311 KRLHDFYGDWQKLPDNVSYDNGFKEQWEMFIRHVYEDA-------PYKFTLLEGAKGVQLAECALKS-WKERRWIDVAPI 382 (383)
T ss_dssp --CCCGGGGSEECCCCSCCCCHHHHHHHHHHHHHHHCC-------CCCCSHHHHHHHHHHHHHHHHH-HHHTBCEECCCC
T ss_pred CcccccccccccCCCCCCccchHHHHHHHHHHHHhcCC-------CCCCCHHHHHHHHHHHHHHHHH-HhhCCeEeccCC
Confidence 00000 0123578999999999999998 8889999999999999999999 699999999986
No 24
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=100.00 E-value=2.2e-55 Score=401.79 Aligned_cols=311 Identities=20% Similarity=0.239 Sum_probs=256.9
Q ss_pred CCceEEEEecccccchhccchhhhcCC-eEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEE
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISD-LVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~-~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I 79 (355)
|++||||||+|.||.. |++.+...++ +++|+++||+++++++.+++ ++ +++..| +|+++|++++++|+|+|
T Consensus 1 M~~rigiiG~G~ig~~-~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~---~~--~~~~~~--~~~~~ll~~~~vD~V~i 72 (334)
T 3ohs_X 1 MALRWGIVSVGLISSD-FTAVLQTLPRSEHQVVAVAARDLSRAKEFAQ---KH--DIPKAY--GSYEELAKDPNVEVAYV 72 (334)
T ss_dssp -CEEEEEECCSHHHHH-HHHHHTTSCTTTEEEEEEECSSHHHHHHHHH---HH--TCSCEE--SSHHHHHHCTTCCEEEE
T ss_pred CccEEEEECchHHHHH-HHHHHHhCCCCCeEEEEEEcCCHHHHHHHHH---Hc--CCCccc--CCHHHHhcCCCCCEEEE
Confidence 8999999999999986 9999988764 38999999999999999887 34 554444 89999999999999999
Q ss_pred ecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH--hCC
Q 018445 80 VLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--IGD 157 (355)
Q Consensus 80 ~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--iG~ 157 (355)
+||+..|++++++||++|||||||||++.+++|+++|++++++ +|+.+++++++||.|.++++|++|++ ||+
T Consensus 73 ~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~------~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~ 146 (334)
T 3ohs_X 73 GTQHPQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARS------RGLFLMEAIWTRFFPASEALRSVLAQGTLGD 146 (334)
T ss_dssp CCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHH------TTCCEEEECGGGGSHHHHHHHHHHHHTTTCS
T ss_pred CCCcHHHHHHHHHHHhcCCEEEEECCCCCCHHHHHHHHHHHHH------hCCEEEEEEhHhcCHHHHHHHHHHhcCCCCC
Confidence 9999999999999999999999999999999999999999999 59999999999999999999999987 999
Q ss_pred eeEEEEEEeeccCCCCCccCccccccccCccccchhhHHHHHHHHHhC-CcceeEEEeecccCCCCCCCceEEEEEEecC
Q 018445 158 MMSVQVIVEGSMNSSNPYFSSSWRRNFTGGFILDMGVHFIAGLRMITG-CEVVSVSAITSHIDKTLPPPDNISSNFQLEN 236 (355)
Q Consensus 158 i~~v~~~~~~~~~~~~~~~~~~w~~~~~gg~l~d~g~H~id~~~~l~G-~~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~ 236 (355)
|+.+++.+..+... . ...|....+||.|+|+|+|.+|+++|++| ..|++|++.+..... +.+|++.++++|+|
T Consensus 147 i~~v~~~~~~~~~~--~--~~~~~~~~gGG~l~d~g~H~id~~~~l~G~~~p~~v~a~~~~~~~--~~~d~~~~~l~~~~ 220 (334)
T 3ohs_X 147 LRVARAEFGKNLTH--V--PRAVDWAQAGGALLDLGIYCVQFISMVFGGQKPEKISVMGRRHET--GVDDTVTVLLQYPG 220 (334)
T ss_dssp EEEEEEEEECCCTT--C--HHHHCTTTTCSHHHHTHHHHHHHHHHHTTTCCCSEEEEEEEECTT--SSEEEEEEEEEETT
T ss_pred eEEEEEEccCCCCC--c--CcCCCcccCCCCHHHhhhHHHHHHHHHhCCCCCeEEEEEEEECCC--CcceEEEEEEEeCC
Confidence 99999987643211 1 01122337899999999999999999999 689999998764332 57899999999999
Q ss_pred CcEEEEEEEEecCCCCeEEEEEeeeeEEEEecCCCCCCCceeEEEeCCCCccee----------eecCCCChHHHHHHHH
Q 018445 237 GCSGVFVMVVSSRSPKIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGADGQSKS----------MFYPFSGVTEELKAFI 306 (355)
Q Consensus 237 G~~~~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~f~ 306 (355)
|.++++.+++..+.. .+++|+|++|++.+...... ...+.. .+.... .....++|..|+++|+
T Consensus 221 G~~~~~~~s~~~~~~-~~~~i~G~~G~i~~~~~~~~---~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~f~ 293 (334)
T 3ohs_X 221 EVHGSFTCSITAQLS-NTASVSGTKGMAQLLNPCWC---PTELVV---KGEHKEFLLPPVPKNCNFDNGAGMSYEAKHVR 293 (334)
T ss_dssp TEEEEEEEESSSCCC-CCEEEEETTEEEEECSSTTS---CCEEEE---TTEEEECCCCSCCCSCSSTTGGGHHHHHHHHH
T ss_pred CCEEEEEEEeccCCC-CeEEEEeeeEEEEECCCCCC---CeEEEE---CCeEEEEeCCCcccccccCCCCccHHHHHHHH
Confidence 999999999987543 57999999999999322221 111221 111110 0111257999999999
Q ss_pred HHHHHhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHch
Q 018445 307 HDISEAKKGINHVPEPRSSFLEGARDVALLEAMLESG 343 (355)
Q Consensus 307 ~~i~~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~ 343 (355)
++|++|..+ .+..++++++.++++++++++|+
T Consensus 294 ~~i~~g~~~-----~~~~~~~~~l~~~~i~~~i~~~~ 325 (334)
T 3ohs_X 294 ECLRKGLKE-----SPVIPLVESELLADILEEVRRAI 325 (334)
T ss_dssp HHHHTTCSS-----CSSSCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHcCCCC-----CCCCCHHHHHHHHHHHHHHHHHc
Confidence 999988522 67889999999999999999993
No 25
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=100.00 E-value=2.6e-55 Score=400.39 Aligned_cols=313 Identities=18% Similarity=0.172 Sum_probs=261.2
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
+||||||+|.||.. |++.+.+.++ ++|+++||+++++++.+++ ++ ++...| +|+++|++++++|+|+|+||
T Consensus 6 ~rigiiG~G~ig~~-~~~~l~~~~~-~~~~av~d~~~~~~~~~a~---~~--~~~~~~--~~~~~ll~~~~~D~V~i~tp 76 (329)
T 3evn_A 6 VRYGVVSTAKVAPR-FIEGVRLAGN-GEVVAVSSRTLESAQAFAN---KY--HLPKAY--DKLEDMLADESIDVIYVATI 76 (329)
T ss_dssp EEEEEEBCCTTHHH-HHHHHHHHCS-EEEEEEECSCSSTTCC------CC--CCSCEE--SCHHHHHTCTTCCEEEECSC
T ss_pred eEEEEEechHHHHH-HHHHHHhCCC-cEEEEEEcCCHHHHHHHHH---Hc--CCCccc--CCHHHHhcCCCCCEEEECCC
Confidence 69999999999986 8999988876 9999999999999988876 44 444444 89999999999999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH--hCCeeE
Q 018445 83 GQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--IGDMMS 160 (355)
Q Consensus 83 ~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--iG~i~~ 160 (355)
+..|++++++||++||||+||||++.+++|+++|++++++ +|+.+++++++||.|.++++|++|++ ||+|..
T Consensus 77 ~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~------~~~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~~ 150 (329)
T 3evn_A 77 NQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAES------CNLFLMEAQKSVFIPMTQVIKKLLASGEIGEVIS 150 (329)
T ss_dssp GGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHH------TTCCEEEECSSCSSHHHHHHHHHHHTTTTCSEEE
T ss_pred cHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHH------cCCEEEEEEcccCCHHHHHHHHHHhCCCCCCeEE
Confidence 9999999999999999999999999999999999999999 59999999999999999999999996 999999
Q ss_pred EEEEEeeccCCCCCccCcccccc--ccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCceEEEEEEecCCc
Q 018445 161 VQVIVEGSMNSSNPYFSSSWRRN--FTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISSNFQLENGC 238 (355)
Q Consensus 161 v~~~~~~~~~~~~~~~~~~w~~~--~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~G~ 238 (355)
+++.+..+. +....|+.+ .+||+++|+|+|.+|+++||+|.+++.|++..... ..+.+|++.++++|+||.
T Consensus 151 v~~~~~~~~-----~~~~~w~~~~~~gGG~l~d~g~H~id~~~~l~G~~~~~v~~~~~~~--~~~~~d~~~~~l~~~~G~ 223 (329)
T 3evn_A 151 ISSTTAYPN-----IDHVTWFRELELGGGTVHFMAPYALSYLQYLFDATITHASGTATFP--KGQSDSQSKLLLQLSNGV 223 (329)
T ss_dssp EEEEEECTT-----GGGSTTTTCGGGTCSHHHHHHHHHHHHHHHHTTCCEEEEEEEEECC--TTSCCSEEEEEEEETTSC
T ss_pred EEEEeccCC-----CCCcccccCcccCCcHHHHHHHHHHHHHHHHhCCCceEEEEEEEeC--CCCcceEEEEEEEECCCC
Confidence 999875321 123456654 79999999999999999999998888999877432 235789999999999999
Q ss_pred EEEEEEEEecCCCCeEEEEEeeeeEEEEecCCCCCCCceeEEEeCCCCccee-eecCCCChHHHHHHHHHHHHHhhcCCC
Q 018445 239 SGVFVMVVSSRSPKIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGADGQSKS-MFYPFSGVTEELKAFIHDISEAKKGIN 317 (355)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~f~~~i~~~~~~~~ 317 (355)
++++..+|..+. ..+++|+|++|++.++..... ....+...++.... .....++|..++++|+++|+++..
T Consensus 224 ~~~~~~s~~~~~-~~~~~i~G~~G~i~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~e~~~f~~~i~~g~~--- 295 (329)
T 3evn_A 224 LVDIFLTTRLNL-PHEMIIYGTEGRLIIPHFWKT----THAKLVRNDTSARTIQVDMVSDFEKEAYHVSQMILEGQR--- 295 (329)
T ss_dssp EEEEEEESSSCC-CCEEEEEETTEEEEEETTTSC----SEEEEEESSSCEEEEECCCSCTTHHHHHHHHHHHHTTCS---
T ss_pred EEEEEEEccCCC-CCEEEEEeCceEEEECCCCCC----CeEEEEECCCeeEEEEcCCCCCCHHHHHHHHHHHHcCCC---
Confidence 999999997754 468999999999999864321 12333333443322 223346899999999999998861
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHchhcCCc
Q 018445 318 HVPEPRSSFLEGARDVALLEAMLESGSKQGA 348 (355)
Q Consensus 318 ~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~ 348 (355)
..+.++++++++++++++++++|+ +++.
T Consensus 296 --~~~~~~~~~~l~~~~ii~ai~~s~-~~~~ 323 (329)
T 3evn_A 296 --VSHIMTPQLTLSGVKIIEDLYRSW-GKEG 323 (329)
T ss_dssp --SCSSSCHHHHHHHHHHHHHHHHHT-TCCC
T ss_pred --CCCCCCHHHHHHHHHHHHHHHHHh-hhcc
Confidence 157899999999999999999995 5544
No 26
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.7e-55 Score=405.88 Aligned_cols=318 Identities=15% Similarity=0.148 Sum_probs=259.7
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
++||||||+|.++...|++.+.. ++ ++|+||||+++++++.+++ ++ +....| +|+++||+++++|+|+|+|
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~-~~-~~lvav~d~~~~~a~~~a~---~~--~~~~~~--~~~~~ll~~~~vD~V~I~t 96 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLR-AG-ARLAGFHEKDDALAAEFSA---VY--ADARRI--ATAEEILEDENIGLIVSAA 96 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHH-TT-CEEEEEECSCHHHHHHHHH---HS--SSCCEE--SCHHHHHTCTTCCEEEECC
T ss_pred CcEEEEECcCHHHHHHHHHHhhc-CC-cEEEEEEcCCHHHHHHHHH---Hc--CCCccc--CCHHHHhcCCCCCEEEEeC
Confidence 57999999999996557888764 55 9999999999999999887 34 333344 9999999999999999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccC-chHHHHHHHHHHH--hCCe
Q 018445 82 AGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRF-EPAFVECKKLIAE--IGDM 158 (355)
Q Consensus 82 p~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~-~p~~~~~k~~i~~--iG~i 158 (355)
|+..|++++++||++|||||||||++.+++|+++|++++++ +|+.++|++++|| .|.++++|++|++ ||+|
T Consensus 97 p~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~------~g~~l~v~~~~R~~~p~~~~~k~~i~~g~iG~i 170 (361)
T 3u3x_A 97 VSSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAE------TGRIFSILYSEHFESPATVKAGELVAAGAIGEV 170 (361)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHT------TCCCEEEECHHHHTCHHHHHHHHHHHTTTTSSE
T ss_pred ChHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHH------cCCEEEEechHhhCCHHHHHHHHHHHcCCCCCe
Confidence 99999999999999999999999999999999999999999 5999999999999 5999999999997 9999
Q ss_pred eEEEEEEeeccCCCCCccCcccccc--ccCccccchhhHHHHHHHHHhCCcc-eeEEEeecccCC--CCCCCceEEEEEE
Q 018445 159 MSVQVIVEGSMNSSNPYFSSSWRRN--FTGGFILDMGVHFIAGLRMITGCEV-VSVSAITSHIDK--TLPPPDNISSNFQ 233 (355)
Q Consensus 159 ~~v~~~~~~~~~~~~~~~~~~w~~~--~~gg~l~d~g~H~id~~~~l~G~~~-~~V~a~~~~~~~--~~~~~d~~~~~l~ 233 (355)
..+++.+...+ .++....|+.+ .+||+++|+|+|.+|+++||+|.++ +.|++...+... ..+.+|++.++++
T Consensus 171 ~~~~~~~~~~~---~~~~~~~w~~~~~~~GG~l~d~g~H~iD~~~~l~G~~~~~~v~a~~~~~~~~~~~~~~d~~~~~l~ 247 (361)
T 3u3x_A 171 VHIVGLGPHRL---RRETRPDWFFRRADYGGILTDIASHQCEQFLFFTGVNDATVLSASVGNQSVPDAPELQDTGSIHLS 247 (361)
T ss_dssp EEEEEEEECCC---CGGGSCGGGTCHHHHCCHHHHHSHHHHHHHHHHHCCSCCEEEEEEEECCSCTTSTTSCCEEEEEEE
T ss_pred EEEEEeccccc---CCCCCCCcccCcCccCchHHhhhhHHHHHHHHHhCCCCeEEEEEEeecccCCCCCCCCceEEEEEE
Confidence 99998754322 22334567765 7899999999999999999999755 457887754422 2468999999999
Q ss_pred ecCCcEEEEEEEEecCCC-----CeEEEEEeeeeEEEEecCCCC--CCCceeEEEeCCCCcceeeecCCCChHHHHHHHH
Q 018445 234 LENGCSGVFVMVVSSRSP-----KIFWRVVGMKGTLQVERGNQD--GRHGYLVTQYGADGQSKSMFYPFSGVTEELKAFI 306 (355)
Q Consensus 234 ~~~G~~~~~~~~~~~~~~-----~~~~~i~G~~G~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 306 (355)
|+||. +++..+|..+.. ..+++|+|++|++.++..... ......+.+...++..... ....+..++++|+
T Consensus 248 ~~~G~-~~~~~s~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~l~~~~~~g~~~~~--~~~~~~~~~~~F~ 324 (361)
T 3u3x_A 248 TGRTT-GMIHVNWLTPEGMPTWGDGRLFIVGTSGTIEVRKTVDLAGREGGNHLFLADRNGVEHID--CSRVDLPFGRQFL 324 (361)
T ss_dssp CSSCE-EEEEEESCCCTTCSSSCCCEEEEEESSCEEEEECSCCTTSSSSSCEEEEECSSCEEEEE--CTTSCCTHHHHHH
T ss_pred ECCce-EEEEEEeecCCCCCCCCCceEEEEeCCeEEEEeccccccccCCCceEEEECCCCceecC--ccccCChHHHHHH
Confidence 99999 999999987643 358999999999999864321 1123345555544432221 1244567889999
Q ss_pred HHHHHhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHchhcCCc
Q 018445 307 HDISEAKKGINHVPEPRSSFLEGARDVALLEAMLESGSKQGA 348 (355)
Q Consensus 307 ~~i~~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~ 348 (355)
++|+++. ++.++.+|+++++++++|+++| +++.+
T Consensus 325 ~ai~~~~-------~~~~~~~d~l~~l~i~~a~~~S-a~~~~ 358 (361)
T 3u3x_A 325 ADIRDRT-------ETAMPQERCFKAMELALQAQAI-AEQNG 358 (361)
T ss_dssp HHHHHSC-------CSSSCHHHHHHHHHHHHHHHHH-HC---
T ss_pred HHHHcCC-------CCCCCHHHHHHHHHHHHHHHHH-HHHhh
Confidence 9999997 8899999999999999999999 46654
No 27
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=100.00 E-value=9.4e-56 Score=405.87 Aligned_cols=320 Identities=16% Similarity=0.190 Sum_probs=260.0
Q ss_pred CCceEEEEecccccchhccc-hhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEE
Q 018445 1 MAPRIAILGAGIFVKTQYIP-RLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~-~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I 79 (355)
|++||||||+|.||...|++ .+...++ ++|++|||+++++++.++ .++++. .| +|+++|++++++|+|+|
T Consensus 1 m~~rvgiiG~G~~g~~~~~~~~~~~~~~-~~l~av~d~~~~~~~~~~-----~~~~~~-~~--~~~~~ll~~~~~D~V~i 71 (345)
T 3f4l_A 1 MVINCAFIGFGKSTTRYHLPYVLNRKDS-WHVAHIFRRHAKPEEQAP-----IYSHIH-FT--SDLDEVLNDPDVKLVVV 71 (345)
T ss_dssp -CEEEEEECCSHHHHHHTHHHHTTCTTT-EEEEEEECSSCCGGGGSG-----GGTTCE-EE--SCTHHHHTCTTEEEEEE
T ss_pred CceEEEEEecCHHHHHHHHHHHHhcCCC-eEEEEEEcCCHhHHHHHH-----hcCCCc-eE--CCHHHHhcCCCCCEEEE
Confidence 88999999999999866898 5566666 999999999998874332 223443 33 89999999999999999
Q ss_pred ecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH--hCC
Q 018445 80 VLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--IGD 157 (355)
Q Consensus 80 ~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--iG~ 157 (355)
+||+..|++++++|+++||||+||||++.+++|+++|++++++ +|+.++|++++||+|.++++|++|++ ||+
T Consensus 72 ~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~------~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~ 145 (345)
T 3f4l_A 72 CTHADSHFEYAKRALEAGKNVLVEKPFTPTLAQAKELFALAKS------KGLTVTPYQNRRFDSCFLTAKKAIESGKLGE 145 (345)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHH------HTCCEEECCGGGGCHHHHHHHHHHHHSTTCS
T ss_pred cCChHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHH------cCCeEEEEechhcCHHHHHHHHHHhcCCCCC
Confidence 9999999999999999999999999999999999999999999 49999999999999999999999997 999
Q ss_pred eeEEEEEEeeccCCCCCccCccccccccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCceEEEEEEecCC
Q 018445 158 MMSVQVIVEGSMNSSNPYFSSSWRRNFTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISSNFQLENG 237 (355)
Q Consensus 158 i~~v~~~~~~~~~~~~~~~~~~w~~~~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~G 237 (355)
|+.+++.+..+.+ .. ..|....+||.++|+|+|.+|+++|++| +|++|++.........+.+|++.++++|+||
T Consensus 146 i~~~~~~~~~~~~--~~---~~~~~~~~gG~l~d~g~H~id~~~~l~G-~~~~v~a~~~~~~~~~~~~d~~~~~l~~~~~ 219 (345)
T 3f4l_A 146 IVEVESHFDYYRP--VA---ETKPGLPQDGAFYGLGVHTMDQIISLFG-RPDHVAYDIRSLRNKANPDDTFEAQLFYGDL 219 (345)
T ss_dssp EEEEEEECCCBCC--CC---CCCCCCGGGSHHHHTHHHHHHHHHHHHC-SCSEEEEEEECCSCTTSSCCEEEEEEEETTE
T ss_pred eEEEEEEeeccCC--cc---ccCCCCCCCchhheehHHHHHHHHHHhC-CCeEEEEEEEEecCCCCcceEEEEEEEECCE
Confidence 9999987542211 11 1223347899999999999999999999 7999999887665556789999999999997
Q ss_pred cEEEEEEEEecCCCCeEEEEEeeeeEEEEecCCC----------C-------CCCceeEEEeCCCCcceeee--cCCCCh
Q 018445 238 CSGVFVMVVSSRSPKIFWRVVGMKGTLQVERGNQ----------D-------GRHGYLVTQYGADGQSKSMF--YPFSGV 298 (355)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~----------~-------~~~~~~~~~~~~~~~~~~~~--~~~~~~ 298 (355)
. +.+..++..+....+++|+|++|++.++.... . ......+......+...... ...+.|
T Consensus 220 ~-~~~~~s~~~~~~~~~~~i~G~~G~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 298 (345)
T 3f4l_A 220 K-AIVKTSHLVKIDYPKFIVHGKKGSFIKYGIDQQETSLKANIMPGEPGFAADDSVGVLEYVNDEGVTVREEMKPEMGDY 298 (345)
T ss_dssp E-EEEEECSBCSSCCCSEEEEESSEEEEECSCCSHHHHHHTTCCTTSTTTTCCCCCEEEEEECTTSCEEEEEECCCCCCT
T ss_pred E-EEEEEEecccCCCCEEEEEecceEEEEeCCChhHHHHhcCCCCCCCCCCcCCCcceEEEecCCCcccceecCCCCCCH
Confidence 4 67777777666667899999999999765321 0 00112344444444332221 224589
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHchhcCCcEE
Q 018445 299 TEELKAFIHDISEAKKGINHVPEPRSSFLEGARDVALLEAMLESGSKQGALV 350 (355)
Q Consensus 299 ~~~~~~f~~~i~~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~v 350 (355)
..++++|+++|+++. ++.++.+|+++++++++|+++| +++|++.
T Consensus 299 ~~~~~~f~~ai~~g~-------~~~~~~~da~~~~~iiea~~~S-a~~g~~~ 342 (345)
T 3f4l_A 299 GRVYDALYQTITHGA-------PNYVKESEVLTNLEILERGFEQ-ASPSTVT 342 (345)
T ss_dssp THHHHHHHHHHHHCC-------CCSSCHHHHHHHHHHHHHTTSS-SSSEEEE
T ss_pred HHHHHHHHHHHhcCC-------CCCCCHHHHHHHHHHHHHHHHh-hhcCccc
Confidence 999999999999998 8889999999999999999999 5888764
No 28
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=100.00 E-value=1.2e-54 Score=397.03 Aligned_cols=324 Identities=20% Similarity=0.254 Sum_probs=270.1
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
|||||||+|.||..+|++.+.+ ++ ++++++||+++++++.+++ ++ ++...| +|+++|++++++|+|+|+||
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~-~~-~~~vav~d~~~~~~~~~~~---~~--g~~~~~--~~~~~~l~~~~~D~V~i~tp 71 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA-TG-GEVVSMMSTSAERGAAYAT---EN--GIGKSV--TSVEELVGDPDVDAVYVSTT 71 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH-TT-CEEEEEECSCHHHHHHHHH---HT--TCSCCB--SCHHHHHTCTTCCEEEECSC
T ss_pred CeEEEEcccHHHHHhhhHHhhc-CC-CeEEEEECCCHHHHHHHHH---Hc--CCCccc--CCHHHHhcCCCCCEEEEeCC
Confidence 6999999999998733888888 65 8999999999999988876 33 443333 89999999889999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH--hCCeeE
Q 018445 83 GQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--IGDMMS 160 (355)
Q Consensus 83 ~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--iG~i~~ 160 (355)
+..|++++++||++||||+||||++.+.+++++|.+++++ +|+.+++++++||+|.++++|++|++ ||+|.+
T Consensus 72 ~~~h~~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~------~g~~~~~~~~~r~~p~~~~~~~~i~~g~iG~i~~ 145 (332)
T 2glx_A 72 NELHREQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAARE------AGVVLGTNHHLRNAAAHRAMRDAIAEGRIGRPIA 145 (332)
T ss_dssp GGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHH------HTCCEEECCCGGGSHHHHHHHHHHHTTTTSSEEE
T ss_pred hhHhHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHH------cCCEEEEeehhhcCHHHHHHHHHHHcCCCCCeEE
Confidence 9999999999999999999999999999999999999999 49999999999999999999999996 999999
Q ss_pred EEEEEeeccCCCCCccCcccccc---ccCccccchhhHHHHHHHHHhCCcceeEEEeeccc-CCCCCCCceEEEEEEecC
Q 018445 161 VQVIVEGSMNSSNPYFSSSWRRN---FTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHI-DKTLPPPDNISSNFQLEN 236 (355)
Q Consensus 161 v~~~~~~~~~~~~~~~~~~w~~~---~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~-~~~~~~~d~~~~~l~~~~ 236 (355)
+++.+..+.+ ....+|+.+ .+||.++|+|+|.+|+++|++|.+|++|++..... .+..+.+|++.++++|+|
T Consensus 146 v~~~~~~~~~----~~~~~w~~~~~~~ggG~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~~d~~~~~l~~~~ 221 (332)
T 2glx_A 146 ARVFHAVYLP----PHLQGWRLERPEAGGGVILDITVHDADTLRFVLNDDPAEAVAISHSAGMGKEGVEDGVMGVLRFQS 221 (332)
T ss_dssp EEEEEECBCC----GGGTTGGGSCTTTTCSHHHHTHHHHHHHHHHHHTSCEEEEEEEEECCSSSCTTCCSEEEEEEEETT
T ss_pred EEEEEcccCC----CCCCCcccccCCCCCchHhhhhHHHHHHHHHHcCCCCcEEEEEEecCCCCCCCccceEEEEEEECC
Confidence 9998765431 223467754 68999999999999999999998899999987554 334568999999999999
Q ss_pred CcEEEEEEEEecCCCCeEEEEEeeeeEEEEecCCCCCCCceeEEEeCCCCcceeeecCCCChHHHHHHHHHHHHHhhcCC
Q 018445 237 GCSGVFVMVVSSRSPKIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGADGQSKSMFYPFSGVTEELKAFIHDISEAKKGI 316 (355)
Q Consensus 237 G~~~~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~~~~~~ 316 (355)
|.++++..+|..+....+++|+|++|++.+....... ....+.+....+.........++|..++++|+++|+++.
T Consensus 222 G~~~~~~~s~~~~~~~~~~~i~G~~G~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~~~--- 297 (332)
T 2glx_A 222 GVIAQFHDAFTTKFAETGFEVHGTEGSLIGRNVMTQK-PVGTVTLRNAEGESQLPLDPANLYETALAAFHSAIEGHG--- 297 (332)
T ss_dssp SCEEEEEEESBCSSCCCEEEEEESSCEEEEESCSSSS-SCCEEEEEETTEEEECCCCCCCHHHHHHHHHHHHHTTSS---
T ss_pred CcEEEEEEEeecCCCCceEEEEECceEEEeecccCCC-CCceEEEEcCCCceEEecCCcchHHHHHHHHHHHHhcCC---
Confidence 9999999999876666899999999999765433211 111333333222211222233578899999999999987
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHchhcCCcEEeccC
Q 018445 317 NHVPEPRSSFLEGARDVALLEAMLESGSKQGALVHVKK 354 (355)
Q Consensus 317 ~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~v~~~~ 354 (355)
.+.++++|+++++++++++++| +++|++|.++.
T Consensus 298 ----~~~~~~~~~~~~~~i~~a~~~S-~~~g~~v~~~~ 330 (332)
T 2glx_A 298 ----QPSATGEDGVWSLATGLAVVKA-AATGQAAEIET 330 (332)
T ss_dssp ----CCSSBHHHHHHHHHHHHHHHHH-HHHSSCEECCC
T ss_pred ----CCCCCHHHHHHHHHHHHHHHHH-hhcCceEecCC
Confidence 7889999999999999999999 68999999864
No 29
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.2e-54 Score=398.56 Aligned_cols=317 Identities=21% Similarity=0.263 Sum_probs=268.1
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
++||||||+|.+|.. |++.|.+.++ ++|+++||+++++++.+++ ++ ++ ..| +|+++|++++++|+|+|+|
T Consensus 4 ~~rvgiiG~G~~g~~-~~~~l~~~~~-~~l~av~d~~~~~~~~~a~---~~--g~-~~~--~~~~~~l~~~~~D~V~i~t 73 (344)
T 3euw_A 4 TLRIALFGAGRIGHV-HAANIAANPD-LELVVIADPFIEGAQRLAE---AN--GA-EAV--ASPDEVFARDDIDGIVIGS 73 (344)
T ss_dssp CEEEEEECCSHHHHH-HHHHHHHCTT-EEEEEEECSSHHHHHHHHH---TT--TC-EEE--SSHHHHTTCSCCCEEEECS
T ss_pred ceEEEEECCcHHHHH-HHHHHHhCCC-cEEEEEECCCHHHHHHHHH---Hc--CC-cee--CCHHHHhcCCCCCEEEEeC
Confidence 479999999999986 9999998876 9999999999999998876 44 33 233 8999999999999999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH--hCCee
Q 018445 82 AGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--IGDMM 159 (355)
Q Consensus 82 p~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--iG~i~ 159 (355)
|+..|++++++|+++||||+||||++.+++++++|.+++++ +|+.+++++++||+|.++++|++|++ ||+|.
T Consensus 74 p~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~------~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~ 147 (344)
T 3euw_A 74 PTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGD------GASKVMLGFNRRFDPSFAAINARVANQEIGNLE 147 (344)
T ss_dssp CGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGG------GGGGEEECCGGGGCHHHHHHHHHHHTTTTSSEE
T ss_pred CchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHh------cCCeEEecchhhcCHHHHHHHHHHhcCCCCceE
Confidence 99999999999999999999999999999999999999999 59999999999999999999999997 99999
Q ss_pred EEEEEEeeccCCCCCccCccccccccCccccchhhHHHHHHHHHhCCcceeEEEeecccCC----CCCCCceEEEEEEec
Q 018445 160 SVQVIVEGSMNSSNPYFSSSWRRNFTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDK----TLPPPDNISSNFQLE 235 (355)
Q Consensus 160 ~v~~~~~~~~~~~~~~~~~~w~~~~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~----~~~~~d~~~~~l~~~ 235 (355)
.+++.+..+.. .+..|. ..+||.++|+|+|.+|+++||+| +|++|++....... ..+.+|++.++++|+
T Consensus 148 ~v~~~~~~~~~-----~~~~~~-~~~gG~l~d~g~H~ld~~~~l~G-~~~~v~a~~~~~~~~~~~~~~~~D~~~~~l~~~ 220 (344)
T 3euw_A 148 QLVIISRDPAP-----APKDYI-AGSGGIFRDMTIHDLDMARFFVP-NIVEVTATGANVFSQEIAEFNDYDQVIVTLRGS 220 (344)
T ss_dssp EEEEEEECSSC-----CCHHHH-HHSCHHHHHTHHHHHHHHHHHCS-CEEEEEEEEECSSCHHHHHTTCCSEEEEEEEET
T ss_pred EEEEEecCCCC-----CCcccc-cCCCceeecchhhHHHHHHHhcC-CcEEEEEEecccccccccccCCCceEEEEEEEC
Confidence 99987643211 123453 35899999999999999999999 99999998865432 123578999999999
Q ss_pred CCcEEEEEEEEecCCC-CeEEEEEeeeeEEEEecCCCCCCCceeEEEeCCCCcce-eee------cCCCChHHHHHHHHH
Q 018445 236 NGCSGVFVMVVSSRSP-KIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGADGQSK-SMF------YPFSGVTEELKAFIH 307 (355)
Q Consensus 236 ~G~~~~~~~~~~~~~~-~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~f~~ 307 (355)
||.++++..+|..+.. ..+++|+|++|++.++.... ..+.....++... ... ...++|..++++|++
T Consensus 221 ~G~~~~~~~s~~~~~~~~~~~~i~G~~G~i~~~~~~~-----~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 295 (344)
T 3euw_A 221 KGELINIVNSRHCSYGYDQRLEAFGSKGMLAADNIRP-----TTVRKHNAESTEQADPIFNFFLERYDAAYKAELATFAQ 295 (344)
T ss_dssp TSCEEEEEEESCCTTSCEEEEEEEETTEEEEECCCCS-----SCEEEESSSCBSEECCCCCSHHHHTHHHHHHHHHHHHH
T ss_pred CCcEEEEEEEeccCCCCceEEEEEECcEEEEEcCCCC-----ceEEEEcCCCccccCCccccchhhhhHHHHHHHHHHHH
Confidence 9999999999987654 47899999999999987432 1244444443322 111 112468899999999
Q ss_pred HHHHhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHchhcCCcEEeccC
Q 018445 308 DISEAKKGINHVPEPRSSFLEGARDVALLEAMLESGSKQGALVHVKK 354 (355)
Q Consensus 308 ~i~~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~v~~~~ 354 (355)
+|+++. ++.++++|+++++++++++++| +++|++|.++.
T Consensus 296 ~i~~~~-------~~~~~~~d~~~~~~i~~a~~~S-a~~g~~V~~~~ 334 (344)
T 3euw_A 296 GIRDGQ-------GFSPNFEDGVIALELANACLES-AQTGRTVTLNP 334 (344)
T ss_dssp HHHHCS-------CCSSBHHHHHHHHHHHHHHHHH-HHHTBCEESSC
T ss_pred HHhcCC-------CCCCCHHHHHHHHHHHHHHHHH-HHhCCeEECCC
Confidence 999998 8899999999999999999999 69999999975
No 30
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=100.00 E-value=2.4e-54 Score=406.92 Aligned_cols=328 Identities=22% Similarity=0.316 Sum_probs=267.4
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccc--cccCcchhhhhcCCCccEEEE
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVEC--VWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ell~~~~~D~V~I 79 (355)
++||||||+|.||...|++.|.+.++ ++|++|||+++++++.+++ ++ ++.. ...|+|+++|++++++|+|+|
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~~~-~~lvav~d~~~~~~~~~a~---~~--g~~~~~~~~~~~~~~ll~~~~vD~V~i 156 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGCQH-SRIEALVSGNAEKAKIVAA---EY--GVDPRKIYDYSNFDKIAKDPKIDAVYI 156 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTCSS-EEEEEEECSCHHHHHHHHH---HT--TCCGGGEECSSSGGGGGGCTTCCEEEE
T ss_pred ceEEEEECCcHHHHHHHHHHHhhCCC-cEEEEEEcCCHHHHHHHHH---Hh--CCCcccccccCCHHHHhcCCCCCEEEE
Confidence 47999999999996349999988776 9999999999999988876 34 3321 112389999999999999999
Q ss_pred ecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH--hCC
Q 018445 80 VLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--IGD 157 (355)
Q Consensus 80 ~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--iG~ 157 (355)
+||+..|++++++||++||||+||||++.+++|+++|.+++++ +|+.+++++++||+|.++++|++|++ ||+
T Consensus 157 atp~~~h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~------~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG~ 230 (433)
T 1h6d_A 157 ILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKA------ANKKLMIGYRCHYDPMNRAAVKLIRENQLGK 230 (433)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHH------HTCCEEECCGGGGCHHHHHHHHHHHTTSSCS
T ss_pred cCCchhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHH------hCCeEEEEechhcCHHHHHHHHHHHcCCCCC
Confidence 9999999999999999999999999999999999999999999 49999999999999999999999996 999
Q ss_pred eeEEEEEEeeccCCCCCccCcc-cccc--c-cCccccchhhHHHHHHHHHhCCcceeEEEe-ecccC-CC-CCCCceEEE
Q 018445 158 MMSVQVIVEGSMNSSNPYFSSS-WRRN--F-TGGFILDMGVHFIAGLRMITGCEVVSVSAI-TSHID-KT-LPPPDNISS 230 (355)
Q Consensus 158 i~~v~~~~~~~~~~~~~~~~~~-w~~~--~-~gg~l~d~g~H~id~~~~l~G~~~~~V~a~-~~~~~-~~-~~~~d~~~~ 230 (355)
|..+++.+..+... +.+.. |+.+ . +||.++|+|+|.+|+++|++|.+|++|++. ..... .. .+.+|++.+
T Consensus 231 i~~v~~~~~~~~~~---~~~~~~wr~~~~~~gGG~l~d~g~H~lD~~~~l~G~~p~~V~a~~~~~~~~~~~~~veD~~~~ 307 (433)
T 1h6d_A 231 LGMVTTDNSDVMDQ---NDPAQQWRLRRELAGGGSLMDIGIYGLNGTRYLLGEEPIEVRAYTYSDPNDERFVEVEDRIIW 307 (433)
T ss_dssp EEEEEEEEECCCCT---TSHHHHGGGCHHHHSSSHHHHTHHHHHHHHHHHHTSCEEEEEEEEECCTTCGGGSSSCSEEEE
T ss_pred cEEEEEEEeccccc---CCCCcccccccccCCCCceecccchHHHHHHHHcCCCCEEEEEEecccCCCccccccCceEEE
Confidence 99999887543311 11235 7765 4 899999999999999999999779999998 43322 11 257899999
Q ss_pred EEEecCCcEEEEEEEEecCCCCeEEEEEeeeeEEEEecCCCCCCCceeEEEeCC----CCc-ceeeecCCCChHHHHHHH
Q 018445 231 NFQLENGCSGVFVMVVSSRSPKIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGA----DGQ-SKSMFYPFSGVTEELKAF 305 (355)
Q Consensus 231 ~l~~~~G~~~~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~f 305 (355)
+++|+||.++++..+|... ...+++|+|++|++.++........ .+..... .+. ........++|..++++|
T Consensus 308 ~l~f~~G~~~~l~~s~~~~-~~~~~~I~Gt~G~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F 384 (433)
T 1h6d_A 308 QMRFRSGALSHGASSYSTT-TTSRFSVQGDKAVLLMDPATGYYQN--LISVQTPGHANQSMMPQFIMPANNQFSAQLDHL 384 (433)
T ss_dssp EEEETTSCEEEEEEESSSC-CEEEEEEEESSCEEEESSSSCSSCC--CEEEEETTEEEEECCCSSCCSSCCHHHHHHHHH
T ss_pred EEEECCCCEEEEEEEeccC-CCcEEEEEecCeEEEEECCcccccc--EEEEeccccccCCceeeccCCCccHHHHHHHHH
Confidence 9999999999999998763 4578999999999999864421111 1111111 011 011122345788999999
Q ss_pred HHHHHHhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHchhcCCcEEeccCC
Q 018445 306 IHDISEAKKGINHVPEPRSSFLEGARDVALLEAMLESGSKQGALVHVKKF 355 (355)
Q Consensus 306 ~~~i~~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~v~~~~~ 355 (355)
+++|+++. .+.++++|+++++++++++++| +++|++|.++++
T Consensus 385 ~~~I~~g~-------~~~~~~~d~l~~~~ii~a~~~S-a~~g~~V~l~~~ 426 (433)
T 1h6d_A 385 AEAVINNK-------PVRSPGEEGMQDVRLIQAIYEA-ARTGRPVNTDWG 426 (433)
T ss_dssp HHHHHTTC-------CCSSBHHHHHHHHHHHHHHHHH-HHHSSCEECCSC
T ss_pred HHHHhcCC-------CCCCCHHHHHHHHHHHHHHHHH-HhcCCeEEcCCc
Confidence 99999987 7889999999999999999999 689999999763
No 31
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=100.00 E-value=8.2e-55 Score=405.39 Aligned_cols=326 Identities=18% Similarity=0.224 Sum_probs=260.1
Q ss_pred CCceEEEEecc-cccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEE
Q 018445 1 MAPRIAILGAG-IFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 1 m~~rigiiG~G-~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I 79 (355)
|++||||||+| .++.. |++.+.+.++ ++|+++||+++++++.+++ ++ +++ .| +|++||++++++|+|+|
T Consensus 1 ~~~rigiiG~G~~~~~~-~~~~l~~~~~-~~l~av~d~~~~~~~~~a~---~~--g~~-~~--~~~~ell~~~~vD~V~i 70 (387)
T 3moi_A 1 MKIRFGICGLGFAGSVL-MAPAMRHHPD-AQIVAACDPNEDVRERFGK---EY--GIP-VF--ATLAEMMQHVQMDAVYI 70 (387)
T ss_dssp CCEEEEEECCSHHHHTT-HHHHHHHCTT-EEEEEEECSCHHHHHHHHH---HH--TCC-EE--SSHHHHHHHSCCSEEEE
T ss_pred CceEEEEEeCCHHHHHH-HHHHHHhCCC-eEEEEEEeCCHHHHHHHHH---Hc--CCC-eE--CCHHHHHcCCCCCEEEE
Confidence 78999999999 78875 9999998876 9999999999999998887 44 554 33 89999999999999999
Q ss_pred ecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH--hCC
Q 018445 80 VLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--IGD 157 (355)
Q Consensus 80 ~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--iG~ 157 (355)
+||+..|++++++||++|||||||||++.+++++++|++++++ +|+.+++++++||+|.++++|++|++ ||+
T Consensus 71 ~tp~~~H~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~------~g~~~~v~~~~R~~p~~~~~k~~i~~g~iG~ 144 (387)
T 3moi_A 71 ASPHQFHCEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVER------AGVHLVVGTSRSHDPVVRTLRAIVQEGSVGR 144 (387)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHH------HTCCEEECCCGGGSHHHHHHHHHHHHCTTCC
T ss_pred cCCcHHHHHHHHHHHHCCCceeeeCCccCCHHHHHHHHHHHHH------hCCeEEEEeccccCHHHHHHHHHHhcCCCCC
Confidence 9999999999999999999999999999999999999999999 49999999999999999999999997 999
Q ss_pred eeEEEEEEeeccCCCCCccCccccccccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCceEEEEEEecCC
Q 018445 158 MMSVQVIVEGSMNSSNPYFSSSWRRNFTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISSNFQLENG 237 (355)
Q Consensus 158 i~~v~~~~~~~~~~~~~~~~~~w~~~~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~G 237 (355)
|..++..+...+. ..++....|+...+||+++|+|+|.+|+++||+|.+|++|++......+..+.+|++.++++|+||
T Consensus 145 i~~~~~~~~~~~~-~~~~~~~~~~~~~ggG~l~d~g~H~id~~~~l~g~~~~~V~a~~~~~~~~~~~~d~~~~~l~f~~G 223 (387)
T 3moi_A 145 VSMLNCFNYTDFL-YRPRRPEELDTSKGGGIIYNQLPHQIDSIKTITGQRITAVRAMTGRLDPKRPTEGNCAAMLTLEDG 223 (387)
T ss_dssp EEEEEEEEECCGG-GSCCCGGGGCGGGTCSHHHHTHHHHHHHHHHHHCCCEEEEEEEEECCCTTSCSCCEEEEEEEETTS
T ss_pred eEEEEEEeccccc-cCCCChhhcccccCCcchhhhHHHHHHHHHHHhCCCceEEEEEEeecCCCCCcceEEEEEEEECCC
Confidence 9999986533221 112222234445799999999999999999999988999999987766666789999999999999
Q ss_pred cEEEEEEEEecCCCC-eEEEEEeeeeEEEEecCCCC------------------------------------CCC--c--
Q 018445 238 CSGVFVMVVSSRSPK-IFWRVVGMKGTLQVERGNQD------------------------------------GRH--G-- 276 (355)
Q Consensus 238 ~~~~~~~~~~~~~~~-~~~~i~G~~G~i~~~~~~~~------------------------------------~~~--~-- 276 (355)
+++++..+|..+... ....+.|++|.+........ ... +
T Consensus 224 ~~~~~~~s~~~~~~~~~~~~~~g~~g~~~~p~~g~~~~~~~~~g~d~qe~~l~~~~~~g~~~~~d~~~~~~~~~~~fG~~ 303 (387)
T 3moi_A 224 ACAVMVYSGYDHFDSDEMHFWLAEGGRAKQPNHGGARKVLRQLEGDEAELRRSRYGFGGPISKSMESGNTDRKQPHFGVM 303 (387)
T ss_dssp CEEEEEEECSSSSCGGGGTTTBCTTSSBCCCCSSHHHHHHHHCCSCHHHHHHHHHSTTSTTCCC------CCCCCCCSEE
T ss_pred CEEEEEEecccCCCCCeEEEEEEcCCeecCccccccccceeccCCcchhhhccccccCCccccccccccccccccccCcc
Confidence 999999998765432 33445555555544220000 000 0
Q ss_pred -------------eeEEEeCCCCcceeeecCCC---ChHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 018445 277 -------------YLVTQYGADGQSKSMFYPFS---GVTEELKAFIHDISEAKKGINHVPEPRSSFLEGARDVALLEAML 340 (355)
Q Consensus 277 -------------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~ 340 (355)
..+.....++.........+ .|..++++|+++|+++. ++.++.+++++++++++|++
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~g~-------~~~~~~e~a~~~l~v~eA~~ 376 (387)
T 3moi_A 304 LVTCEHADLRASPEGVLVYGDEGVREVPAITGRGPFSQGDTIDELRDAIAGVA-------PALRDARWGKDTLEVCLAVL 376 (387)
T ss_dssp EEEESSEEEEECSSEEEEEETTEEEEEECCCCSSSTHHHHHHHHHHHHHTTSS-------CCSSCHHHHHHHHHHHHHHH
T ss_pred ccchhccCCCCCCCceEEecCCCceeeccCCCCCCcchHHHHHHHHHHHhCCC-------CCCCCHHHHHHHHHHHHHHH
Confidence 01111111111111111112 27899999999999997 89999999999999999999
Q ss_pred HchhcCCcEEe
Q 018445 341 ESGSKQGALVH 351 (355)
Q Consensus 341 ~S~~~~g~~v~ 351 (355)
+| .++|++|+
T Consensus 377 ~S-a~~g~~V~ 386 (387)
T 3moi_A 377 ES-SATGRQVE 386 (387)
T ss_dssp HH-HHHSSCEE
T ss_pred Hh-hhcCCcCc
Confidence 99 58999985
No 32
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=100.00 E-value=3.3e-55 Score=403.87 Aligned_cols=312 Identities=16% Similarity=0.236 Sum_probs=259.6
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
+||||||+|.+|..+|++.|.+.++ ++|+++||+++++++.+++ ++ ++. ..| +|+++|++++++|+|+|+||
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~~~-~~l~av~d~~~~~~~~~a~---~~-~~~-~~~--~~~~~ll~~~~vD~V~i~tp 77 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQMQD-IRIVAACDSDLERARRVHR---FI-SDI-PVL--DNVPAMLNQVPLDAVVMAGP 77 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTCTT-EEEEEEECSSHHHHGGGGG---TS-CSC-CEE--SSHHHHHHHSCCSEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCC-cEEEEEEcCCHHHHHHHHH---hc-CCC-ccc--CCHHHHhcCCCCCEEEEcCC
Confidence 7999999999998668999998877 9999999999999988875 32 233 333 89999999999999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH--hCCeeE
Q 018445 83 GQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--IGDMMS 160 (355)
Q Consensus 83 ~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--iG~i~~ 160 (355)
+..|++++++||++|||||||||++.+++++++|++++++ +|+.++|++++||.|.++++|++|++ ||+|..
T Consensus 78 ~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~------~g~~~~v~~~~R~~p~~~~~k~~i~~g~iG~i~~ 151 (359)
T 3m2t_A 78 PQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARR------SDVVSGVGMNFKFARPVRQLREMTQVDEFGETLH 151 (359)
T ss_dssp HHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHH------HTCCEEECCHHHHCHHHHHHHHHHTSGGGCCEEE
T ss_pred cHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHH------cCCEEEEEecccCcHHHHHHHHHHHCCCCCCeEE
Confidence 9999999999999999999999999999999999999999 49999999999999999999999986 999999
Q ss_pred EEEEEeeccCCCCCccCcccccc-ccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCceEEEEEEecCCcE
Q 018445 161 VQVIVEGSMNSSNPYFSSSWRRN-FTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISSNFQLENGCS 239 (355)
Q Consensus 161 v~~~~~~~~~~~~~~~~~~w~~~-~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~G~~ 239 (355)
+++.+.... + ....|+.+ .+||.++|+++|.+|+++||+|.+|++|++...... .+|.+.++++|+||.+
T Consensus 152 ~~~~~~~~~----~-~~~~w~~~~~~gg~l~d~~~H~iD~~~~l~G~~~~~V~a~~~~~~----~~d~~~~~l~~~~G~~ 222 (359)
T 3m2t_A 152 IQLNHYANK----P-RAPLWGLDSTLRSFLLAQAIHTIDLAITFGDGELRRVQSSVQRHD----DALIVRADMAFSSGAT 222 (359)
T ss_dssp EEEEEECCC----C-SSCCTTCSCHHHHHHHHTHHHHHHHHHHHHCSCEEEEEEEEEEET----TEEEEEEEEEETTSCE
T ss_pred EEEEEecCC----C-CCCCcccCCCccchhhhcccHHHHHHHHHhCCCceEEEEEeeccC----CCeEEEEEEEECCCCE
Confidence 998864321 1 12457765 467899999999999999999989999999876532 4688999999999999
Q ss_pred EEEEEEEecCCCCeEEEEEeeeeEEEEecCCCCCCCceeEEEeCCCC--------cc-e---e-----eecCCCChHHHH
Q 018445 240 GVFVMVVSSRSPKIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGADG--------QS-K---S-----MFYPFSGVTEEL 302 (355)
Q Consensus 240 ~~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~--------~~-~---~-----~~~~~~~~~~~~ 302 (355)
+++..+|..+....+++|+|++|.+....... .+....... .. . . .....++|..++
T Consensus 223 ~~~~~s~~~~~~~~~~~i~g~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei 296 (359)
T 3m2t_A 223 ASLLAGTSFPYFEFDMKLVSSSSTLVELDNLW------NITLHEPEHATRPTGAAKRWRGAWQPGPLDSGYERSGYHGEL 296 (359)
T ss_dssp EEEEEESCSSSCEEEEEEEETTSCEEEEETTT------EEEEECTTCCBTTTBSCTTCCEEECCCTTCCBSTTTSHHHHH
T ss_pred EEEEEecccCCCceeEEEEeCCceEEEecCce------EEEecCCCcceeeccCCCccccccCCCccccCcCchhHHHHH
Confidence 99999998877668899999999754333221 122211110 00 0 0 011235799999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHchhcCCcEEe
Q 018445 303 KAFIHDISEAKKGINHVPEPRSSFLEGARDVALLEAMLESGSKQGALVH 351 (355)
Q Consensus 303 ~~f~~~i~~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~v~ 351 (355)
++|+++|+++. ++.+++++++.++++++++++| +++|++|+
T Consensus 297 ~~F~~ai~~g~-------~~~~~~~d~l~~~~l~eai~~S-a~~~~~~~ 337 (359)
T 3m2t_A 297 HQFFQAIREHR-------RFEADFASLLPTYRVIEEICSA-DAVAQGLQ 337 (359)
T ss_dssp HHHHHHHHTTC-------CCTTSTGGGHHHHHHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHhcCC-------CCCCCHHHHHHHHHHHHHHHHh-hhcCCCCC
Confidence 99999999997 7999999999999999999999 58887764
No 33
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=100.00 E-value=5.5e-53 Score=398.40 Aligned_cols=328 Identities=15% Similarity=0.175 Sum_probs=263.3
Q ss_pred CceEEEEec----ccccchhccchhhhc-CCeEEEEEEEeCCHHHHHHHHHHHhhhcCCcc--ccccCcchhhhhcCCCc
Q 018445 2 APRIAILGA----GIFVKTQYIPRLAEI-SDLVSLKFIWSRSEESAKSAAEVARKHFADVE--CVWGDNGLEQIIKEDSI 74 (355)
Q Consensus 2 ~~rigiiG~----G~~~~~~~~~~l~~~-~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ell~~~~~ 74 (355)
++||||||+ |.+|.. |++.|.++ ++ ++|++|||+++++++.+++ ++ +++ ..| +|+++|++++++
T Consensus 20 ~irvgiIG~g~~gG~~g~~-~~~~l~~~~~~-~~lvav~d~~~~~~~~~a~---~~--g~~~~~~~--~~~~~ll~~~~v 90 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKT-HYPAILQLSSQ-FQITALYSPKIETSIATIQ---RL--KLSNATAF--PTLESFASSSTI 90 (438)
T ss_dssp CEEEEEESCCTTSSSTTTT-HHHHHHHTTTT-EEEEEEECSSHHHHHHHHH---HT--TCTTCEEE--SSHHHHHHCSSC
T ss_pred CCEEEEEcccCCCChHHHH-HHHHHHhcCCC-eEEEEEEeCCHHHHHHHHH---Hc--CCCcceee--CCHHHHhcCCCC
Confidence 379999999 888875 99999988 65 9999999999999998887 34 333 233 899999999999
Q ss_pred cEEEEecCCcccHHHHHHHHHcC------CeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHH
Q 018445 75 LGVAVVLAGQAQVDTSLKLLKAG------KHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVEC 148 (355)
Q Consensus 75 D~V~I~tp~~~H~~~~~~al~~G------khVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~ 148 (355)
|+|+|+||+..|++++++||++| ||||||||++.+++|+++|++++++ +|+.+++++++||+|.++++
T Consensus 91 D~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a~~------~g~~~~v~~~~R~~p~~~~~ 164 (438)
T 3btv_A 91 DMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAAAE------RGVQTIISLQGRKSPYILRA 164 (438)
T ss_dssp SEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESSCCSSHHHHHHHHHHHHT------TTCEEEEECGGGGCHHHHHH
T ss_pred CEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCcccCCHHHHHHHHHHHHH------cCCeEEEecccccCHHHHHH
Confidence 99999999999999999999999 9999999999999999999999999 59999999999999999999
Q ss_pred HHHHHH--hCCeeEEEEEEeeccCCCCC-ccCcccccc--ccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCC--
Q 018445 149 KKLIAE--IGDMMSVQVIVEGSMNSSNP-YFSSSWRRN--FTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKT-- 221 (355)
Q Consensus 149 k~~i~~--iG~i~~v~~~~~~~~~~~~~-~~~~~w~~~--~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~-- 221 (355)
|++|++ ||+|..+++.+..++..... +...+|+.+ .+||+++|+|+|.+|+++|++|.+|++|++......+.
T Consensus 165 k~~i~~G~iG~i~~v~~~~~~~~~~~~~~~~~~~w~~~~~~gGG~l~d~g~H~lDl~~~l~G~~~~~V~a~~~~~~~~~~ 244 (438)
T 3btv_A 165 KELISQGYIGDINSIEIAGNGGWYGYERPVKSPKYIYEIGNGVDLVTTTFGHTIDILQYMTSSYFSRINAMVFNNIPEQE 244 (438)
T ss_dssp HHHHHTTTTCSEEEEEEEEECSSSSSEEETTSCGGGGSTTSSCSTTTTHHHHHHHHHHHHHTCCEEEEEEEEECCCSEEE
T ss_pred HHHHHcCCCCCcEEEEEEEccCcccccccCCccccccccccCCCeeeeeeeeHHHHHHHHhCCCceEEEEEeeccCCccc
Confidence 999996 99999999987654432211 223457754 78899999999999999999998899999987643221
Q ss_pred --------------CCCCceEEEEEEecCC-cEEEEEEEEecC----CCCeEEEEEeeeeEEEEecCCCCCCCceeEEE-
Q 018445 222 --------------LPPPDNISSNFQLENG-CSGVFVMVVSSR----SPKIFWRVVGMKGTLQVERGNQDGRHGYLVTQ- 281 (355)
Q Consensus 222 --------------~~~~d~~~~~l~~~~G-~~~~~~~~~~~~----~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~- 281 (355)
.+.+|++.++++|+|| +++++..++..+ ....+++|+|++|++.++..... .....+.+
T Consensus 245 ~~d~~~~~~g~~~~~~~~D~~~~~l~~~~G~~~~~~~~s~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~-~~~~~l~~~ 323 (438)
T 3btv_A 245 LIDERGNRLGQRVPKTVPDHLLFQGTLLNGNVPVSCSFKGGKPTKKFTKNLVIDIHGTKRDLKLEGDAGF-AEISNLVLY 323 (438)
T ss_dssp EECTTSCEEEEEEECCSCSEEEEEEEETTTTEEEEEEEESSCCC---CCSEEEEEEESSCEEEEECC------CCEEEEE
T ss_pred cccccccccccccCCCCCceEEEEEEECCCcEEEEEEEEccCCCCCCCCCeEEEEEecCcEEEEecCccc-cccCceEEE
Confidence 2478999999999999 999999987654 34578999999999999876200 00011221
Q ss_pred -eCCCCc---c---eeee-cC--------------------CCChHHHHHHHHHHHHHhhcCCCCCCC------------
Q 018445 282 -YGADGQ---S---KSMF-YP--------------------FSGVTEELKAFIHDISEAKKGINHVPE------------ 321 (355)
Q Consensus 282 -~~~~~~---~---~~~~-~~--------------------~~~~~~~~~~f~~~i~~~~~~~~~~~~------------ 321 (355)
....+. + .... .+ ...+..++++|++ |+++. +
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~-i~~g~-------~~~~~~~~~~~~~ 395 (438)
T 3btv_A 324 YSGTRANDFPLANGQQAPLDPGYDAGKEIMEVYHLRNYNAIVGNIHRLYQSISD-FHFNT-------KKIPELPSQFVMQ 395 (438)
T ss_dssp EEC----------------------CCEEEEEECCSSCCHHHHHHHHHHHHHHH-HHTTT-------TCCTTCCSCCSCC
T ss_pred eccCccccccccccceeecCcccccccccCCCcccccCChHHHHHHHHHHHHHH-HhCCC-------Ccccccccccccc
Confidence 111110 0 0000 00 0235679999999 99887 4
Q ss_pred -----CCCCHHHHHHHHHHHHHHHHchhcCCcEEeccC
Q 018445 322 -----PRSSFLEGARDVALLEAMLESGSKQGALVHVKK 354 (355)
Q Consensus 322 -----~~~~~~d~~~~~~i~~a~~~S~~~~g~~v~~~~ 354 (355)
+.++++|+++++++++|+++| +++|++|.+++
T Consensus 396 ~~~~~~~~~~~d~~~~~~i~~a~~~S-a~~g~~V~~~~ 432 (438)
T 3btv_A 396 GFDFEGFPTLMDALILHRLIESVYKS-NMMGSTLNVSN 432 (438)
T ss_dssp TTCSSSCCCHHHHHHHHHHHHHHHHH-HHHTBCEECTT
T ss_pred ccccCCCCCHHHHHHHHHHHHHHHHH-HhcCCeEEecc
Confidence 789999999999999999999 58999999874
No 34
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=100.00 E-value=4e-53 Score=387.23 Aligned_cols=318 Identities=17% Similarity=0.168 Sum_probs=252.5
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
++||||||+|.++...|++.+.. ++ ++|++|||+++++++.+++ ++ ++. ..| +|+++|++++++|+|+|+|
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~-~~-~~lvav~d~~~~~~~~~a~---~~-~~~-~~~--~~~~~ll~~~~~D~V~i~t 74 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLID-AG-AELAGVFESDSDNRAKFTS---LF-PSV-PFA--ASAEQLITDASIDLIACAV 74 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHH-TT-CEEEEEECSCTTSCHHHHH---HS-TTC-CBC--SCHHHHHTCTTCCEEEECS
T ss_pred ccEEEEECCChHHHHHhhhhhcC-CC-cEEEEEeCCCHHHHHHHHH---hc-CCC-ccc--CCHHHHhhCCCCCEEEEeC
Confidence 47999999999986447888753 44 8999999999999998886 33 233 233 8999999999999999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchH-HHHHHHHHHH--hCCe
Q 018445 82 AGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPA-FVECKKLIAE--IGDM 158 (355)
Q Consensus 82 p~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~-~~~~k~~i~~--iG~i 158 (355)
|+..|++++++||++||||+||||++.+++|+++|++++++ +|+.++|++++||+|. ++++|++|++ ||+|
T Consensus 75 p~~~h~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~------~g~~~~v~~~~R~~p~~~~~~~~~i~~g~iG~i 148 (336)
T 2p2s_A 75 IPCDRAELALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAE------TGRKFAVYFNERINVDSALFAGELVQRGEIGRV 148 (336)
T ss_dssp CGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHH------HCCCEEECCTTTTTCHHHHHHHHHHHTTTTSSE
T ss_pred ChhhHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHH------cCCEEEEeeccccCcHHHHHHHHHHhCCCCCce
Confidence 99999999999999999999999999999999999999999 4999999999999998 9999999996 9999
Q ss_pred eEEEEEEeeccCCCCCccCcccccc--ccCccccchhhHHHHHHHHHhCCc-ceeEEEeecccC--CCCCCCceEEEEEE
Q 018445 159 MSVQVIVEGSMNSSNPYFSSSWRRN--FTGGFILDMGVHFIAGLRMITGCE-VVSVSAITSHID--KTLPPPDNISSNFQ 233 (355)
Q Consensus 159 ~~v~~~~~~~~~~~~~~~~~~w~~~--~~gg~l~d~g~H~id~~~~l~G~~-~~~V~a~~~~~~--~~~~~~d~~~~~l~ 233 (355)
..+++.+...+. + ...+|+.+ .+||.++|+|+|.+|+++|++|.+ |+.|++...... ...+.+|++.++++
T Consensus 149 ~~v~~~~~~~~~---~-~~~~w~~~~~~~gG~l~d~g~H~id~~~~l~G~~~~~~v~a~~~~~~~~~~~~~~d~~~~~l~ 224 (336)
T 2p2s_A 149 IQTMGVGPHRER---G-ARPDWFYQKRQYGGILCDIGIHQIEQFLYFTGNTNARVVTSQTANYHHPHHPEFEDFGDAMLL 224 (336)
T ss_dssp EEEEEEEECBCC---S-CCCGGGGCHHHHCCHHHHTHHHHHHHHHHHHTCSCEEEEEEEEECSSCTTSTTCCSEEEEEEE
T ss_pred EEEEEEccccCC---C-CCCCceecccccCCeeehhhhhHHHHHHHHhCCCCceEEEEeEEeecCCCCCCccchheEEEE
Confidence 999987532222 1 23467765 689999999999999999999965 688998775432 22357899999999
Q ss_pred ecCCcEEEEEEEEecCCC-----CeEEEEEeeeeEEEEecCCCCC-CCceeEEEeCCCCcceeeecCCCChHHHHHHHHH
Q 018445 234 LENGCSGVFVMVVSSRSP-----KIFWRVVGMKGTLQVERGNQDG-RHGYLVTQYGADGQSKSMFYPFSGVTEELKAFIH 307 (355)
Q Consensus 234 ~~~G~~~~~~~~~~~~~~-----~~~~~i~G~~G~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 307 (355)
|+||.++++..+|..+.. ..+++|+|++|++.++...... .....+......+ ......+.......+.+|++
T Consensus 225 ~~~G~~~~~~~s~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~f~~ 303 (336)
T 2p2s_A 225 GDNGATGYFRCDWFTPDGLSVWGDGRLTILGTEGYIEIRKYVDLTRGESNVVYLVNGKG-EQRFTPAGSVERAFFPDFLR 303 (336)
T ss_dssp ETTSCEEEEEEESBCCTTSSSSCCCEEEEEESSCEEEEECSCBTTTTBCSEEEEESSSC-EEEECCTTSSCCCHHHHHHH
T ss_pred ECCCcEEEEEEEecCCCCccccCCceEEEEecceEEEEecccccccCCCceEEeecCCC-cceeccCCCccHHHHHHHHH
Confidence 999999999999987543 3689999999999997542211 1112233322222 11111111111234678999
Q ss_pred HHHHhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHchhcCC
Q 018445 308 DISEAKKGINHVPEPRSSFLEGARDVALLEAMLESGSKQG 347 (355)
Q Consensus 308 ~i~~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g 347 (355)
+|+++. .+.++.+|+++++++++++++|+ +++
T Consensus 304 ~i~~~~-------~~~~~~~d~l~~~~i~~a~~~Sa-~~~ 335 (336)
T 2p2s_A 304 DCRERT-------ENAMSQSHIFKATELSILAQQAA-NKI 335 (336)
T ss_dssp HHHHCC-------CCSSCHHHHHHHHHHHHHHHHHC-EEC
T ss_pred HHhcCC-------CCCCCHHHHHHHHHHHHHHHHhh-hhc
Confidence 999887 78899999999999999999994 554
No 35
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=100.00 E-value=1.7e-52 Score=397.89 Aligned_cols=337 Identities=19% Similarity=0.200 Sum_probs=263.3
Q ss_pred CceEEEEec----ccccchhccchhhhc-CCeEEEEEEEeCCHHHHHHHHHHHhhhcCCcc--ccccCcchhhhhcCCCc
Q 018445 2 APRIAILGA----GIFVKTQYIPRLAEI-SDLVSLKFIWSRSEESAKSAAEVARKHFADVE--CVWGDNGLEQIIKEDSI 74 (355)
Q Consensus 2 ~~rigiiG~----G~~~~~~~~~~l~~~-~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ell~~~~~ 74 (355)
++||||||+ |.+|.. |++.|.+. ++ ++|++|||+++++++.+++ ++ +++ ..| +|+++|++++++
T Consensus 39 ~irvgiIG~g~~GG~~g~~-h~~~l~~~~~~-~~lvav~d~~~~~a~~~a~---~~--g~~~~~~~--~d~~ell~~~~v 109 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKT-HFLAIQQLSSQ-FQIVALYNPTLKSSLQTIE---QL--QLKHATGF--DSLESFAQYKDI 109 (479)
T ss_dssp CEEEEEECCCSTTSHHHHT-HHHHHHHTTTT-EEEEEEECSCHHHHHHHHH---HT--TCTTCEEE--SCHHHHHHCTTC
T ss_pred cCEEEEEcccCCCCHHHHH-HHHHHHhcCCC-eEEEEEEeCCHHHHHHHHH---Hc--CCCcceee--CCHHHHhcCCCC
Confidence 379999999 888875 99999988 55 9999999999999999887 34 333 334 899999999999
Q ss_pred cEEEEecCCcccHHHHHHHHHcC------CeEEEecCCCCCHHHHHHHHHHhhccCCCCCCC-CeEEEEecccCchHHHH
Q 018445 75 LGVAVVLAGQAQVDTSLKLLKAG------KHVIQEKPAAANISEIENALSRYNSICPDPPGQ-PIWAVAENYRFEPAFVE 147 (355)
Q Consensus 75 D~V~I~tp~~~H~~~~~~al~~G------khVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~-~~~~v~~~~r~~p~~~~ 147 (355)
|+|+|+||+..|++++++||++| ||||||||++.+++|+++|++++++ +| +.++|++++||.|.+++
T Consensus 110 D~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKPla~~~~ea~~l~~~a~~------~g~~~~~v~~~~R~~p~~~~ 183 (479)
T 2nvw_A 110 DMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWALAASVQQAEELYSISQQ------RANLQTIICLQGRKSPYIVR 183 (479)
T ss_dssp SEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSSSSSHHHHHHHHHHHHT------CTTCEEEEECGGGGCHHHHH
T ss_pred CEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCCCcCCHHHHHHHHHHHHH------cCCeEEEEEeccccCHHHHH
Confidence 99999999999999999999999 9999999999999999999999999 58 99999999999999999
Q ss_pred HHHHHHH--hCCeeEEEEEEeeccCCCC-CccCcccccc--ccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCC-
Q 018445 148 CKKLIAE--IGDMMSVQVIVEGSMNSSN-PYFSSSWRRN--FTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKT- 221 (355)
Q Consensus 148 ~k~~i~~--iG~i~~v~~~~~~~~~~~~-~~~~~~w~~~--~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~- 221 (355)
+|++|++ ||+|..+++.+..++.... ++....|+.+ .+||+|+|+|+|.+|+++|++|.+|++|++......+.
T Consensus 184 ~k~~i~~G~iG~i~~v~~~~~~~~~~~~~~~~~~~w~~~~~~gGG~l~d~g~H~lDl~~~l~G~~p~~V~a~~~~~~~~~ 263 (479)
T 2nvw_A 184 AKELISEGCIGDINSIEISGNGGWYGYERPMRSPEYLYDIESGVNLISNSFGHTIDVLQYITGSYFQKINAMISNNIPTQ 263 (479)
T ss_dssp HHHHHHTTTTCSEEEEEEEEECSBSSSEEETTCCGGGGCGGGSCSTTTTHHHHHHHHHHHHHTCCEEEEEEEEECCCSEE
T ss_pred HHHHHHcCCCCCeEEEEEEecCCccCCcccccccccccCcccCccHHHHHHHHHHHHHHHHHCCCCCEEEEEEEeccCcc
Confidence 9999996 9999999998765443221 1223467754 78899999999999999999998899999987643221
Q ss_pred ---------------CCCCceEEEEEEecCC-cEEEEEEEEecC----CCCeEEEEEeeeeEEEEecCCCC-CCCceeEE
Q 018445 222 ---------------LPPPDNISSNFQLENG-CSGVFVMVVSSR----SPKIFWRVVGMKGTLQVERGNQD-GRHGYLVT 280 (355)
Q Consensus 222 ---------------~~~~d~~~~~l~~~~G-~~~~~~~~~~~~----~~~~~~~i~G~~G~i~~~~~~~~-~~~~~~~~ 280 (355)
.+.+|++.++++|+|| +++++..++..+ ....+++|+|++|++.++..... ......+.
T Consensus 264 ~~~~~~g~~~g~~~~~~~~D~~~~~l~f~~G~~~~~~~~s~~~~~~~~~~~~~~~I~Gt~G~i~~~~~~~~~~~~~~~~~ 343 (479)
T 2nvw_A 264 FLLDENGKRTKETISKTCPDHLLFQGILENGKVPVSCSFKGGTPVKKLTKNLVIDIHGTKGDLKIEGDAGFVEISNLVLY 343 (479)
T ss_dssp EEEC--CCCCSCEEECCSCCEEEEEEEESGGGCEEEEEEECBSSCCSSSCSEEEEEEESSCEEEEEEC------CCEEEE
T ss_pred cccccccccccccccCCcCeEEEEEEEECCCCEEEEEEEEeccCCCcCCCceEEEEEeCCeEEEEecCCcccccCccEEE
Confidence 2478999999999999 999999988654 33478999999999999876310 00111121
Q ss_pred EeCCCC------------c--c---eee---ecC---C-------------------CChHHHHHHHHHHHHHhh-cC--
Q 018445 281 QYGADG------------Q--S---KSM---FYP---F-------------------SGVTEELKAFIHDISEAK-KG-- 315 (355)
Q Consensus 281 ~~~~~~------------~--~---~~~---~~~---~-------------------~~~~~~~~~f~~~i~~~~-~~-- 315 (355)
.....+ . + ... ..+ . ..+..++++|+++|+++. ..
T Consensus 344 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~f~~~i~~g~~~~~~ 423 (479)
T 2nvw_A 344 FYGIKNGNGSSNGTDNNGAAAIKDKEKVTKSPSPSTGTSEEEQTMEVFHLRNYNSVVGNILRIYESIADYHFLGKPESKS 423 (479)
T ss_dssp EEEESCC---------------------------------CCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHC-------
T ss_pred EeccCCcccccccccccccccccccccccccCCCchhhhccccccCCccccccchHHHHHHHHHHHHHHHHhcCCCcccc
Confidence 111000 0 0 000 000 0 246789999999999775 20
Q ss_pred --------------CCC-CCCCCCCHHHHHHHHHHHHHHHHchhcCCcEEeccC
Q 018445 316 --------------INH-VPEPRSSFLEGARDVALLEAMLESGSKQGALVHVKK 354 (355)
Q Consensus 316 --------------~~~-~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~v~~~~ 354 (355)
.+. ...+.++++|+++++++++|+++| +++|++|.+++
T Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~da~~~~~i~~a~~~S-~~~g~~v~v~~ 476 (479)
T 2nvw_A 424 SRGPDDLFASTKFDKQGFRFEGFPTFKDAIILHRLIDAVFRS-DKEEKTLDVSK 476 (479)
T ss_dssp -----------CCCCCTTCSSSCCCHHHHHHHHHHHHHHHHH-HHHTBCEECTT
T ss_pred cccccccccccccccccccccCCCCHHHHHHHHHHHHHHHHH-HhcCCeeechh
Confidence 000 001788999999999999999999 68999999975
No 36
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=100.00 E-value=1.2e-51 Score=379.30 Aligned_cols=319 Identities=19% Similarity=0.296 Sum_probs=262.5
Q ss_pred CceEEEEecccccchhccchhh-hcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEe
Q 018445 2 APRIAILGAGIFVKTQYIPRLA-EISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~-~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
++||||||+|.+|.. |++.+. +.++ ++++++||+++++++.+++ ++ ++...| +|+++|++++++|+|+|+
T Consensus 8 ~~~v~iiG~G~ig~~-~~~~l~~~~~~-~~~vav~d~~~~~~~~~a~---~~--g~~~~~--~~~~~~l~~~~~D~V~i~ 78 (346)
T 3cea_A 8 PLRAAIIGLGRLGER-HARHLVNKIQG-VKLVAACALDSNQLEWAKN---EL--GVETTY--TNYKDMIDTENIDAIFIV 78 (346)
T ss_dssp CEEEEEECCSTTHHH-HHHHHHHTCSS-EEEEEEECSCHHHHHHHHH---TT--CCSEEE--SCHHHHHTTSCCSEEEEC
T ss_pred cceEEEEcCCHHHHH-HHHHHHhcCCC-cEEEEEecCCHHHHHHHHH---Hh--CCCccc--CCHHHHhcCCCCCEEEEe
Confidence 479999999999985 899988 6665 9999999999999988876 34 443344 899999998889999999
Q ss_pred cCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCC-CCeEEEEecccCchHHHHHHHHHHH--hCC
Q 018445 81 LAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPG-QPIWAVAENYRFEPAFVECKKLIAE--IGD 157 (355)
Q Consensus 81 tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~-~~~~~v~~~~r~~p~~~~~k~~i~~--iG~ 157 (355)
||+..|.+++++||++||||+||||++.+.+++++|.+++++ + ++.+++++++||.|.++.++++|++ ||+
T Consensus 79 tp~~~h~~~~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~------~~~~~~~~~~~~r~~p~~~~~~~~i~~g~iG~ 152 (346)
T 3cea_A 79 APTPFHPEMTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKS------HPNQIFQSGFMRRYDDSYRYAKKIVDNGDIGK 152 (346)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHT------CTTSCEECCCGGGTCHHHHHHHHHHHTTTTCS
T ss_pred CChHhHHHHHHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHh------CCCCeEEEecccccCHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999 7 9999999999999999999999996 999
Q ss_pred eeEEEEEEeeccCCCCCccCcccccc-----ccCccccchhhHHHHHHHHHhCCcceeEEEeecccC-C---CCCCCceE
Q 018445 158 MMSVQVIVEGSMNSSNPYFSSSWRRN-----FTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHID-K---TLPPPDNI 228 (355)
Q Consensus 158 i~~v~~~~~~~~~~~~~~~~~~w~~~-----~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~-~---~~~~~d~~ 228 (355)
|..+++.+..+.. +..|+.+ .+||.++|+|+|.+|+++|++|.+|++|++...... + ..+.+|++
T Consensus 153 i~~v~~~~~~~~~------~~~~~~~~~~~~~~gG~l~d~g~H~lD~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~D~~ 226 (346)
T 3cea_A 153 IIYMRGYGIDPIS------GMESFTKFATEADSGGIFVDMNIHDIDLIRWFTGQDPVQAYGLTSNIAAPQLADIGEFETG 226 (346)
T ss_dssp EEEEEEEEEEEGG------GHHHHHHHHHHSCCCCHHHHTTHHHHHHHHHHHSCCEEEEEEEEECSSCGGGGGGTCCSEE
T ss_pred eEEEEEEecCCCC------CChhHhhhcccCCCCchHHHhhccHHHHHHHHcCCCCeEEEEEEeeccCccccccCCceeE
Confidence 9999987654321 1234333 289999999999999999999977999999876431 1 12346899
Q ss_pred EEEEEecCCcEEEEEEEEecCCC-CeEEEEEeeeeEEEEecCCCCCCCceeEEEeCCCCcceeee-----cCCCChHHHH
Q 018445 229 SSNFQLENGCSGVFVMVVSSRSP-KIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGADGQSKSMF-----YPFSGVTEEL 302 (355)
Q Consensus 229 ~~~l~~~~G~~~~~~~~~~~~~~-~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 302 (355)
.++++|+||.++++..+|..+.. ..+++|+|++|++.++.... ...+......+...... ...++|..++
T Consensus 227 ~~~l~~~~G~~~~~~~s~~~~~~~~~~~~i~G~~G~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (346)
T 3cea_A 227 VAQLKMSDGVIATLIGGRHAAHGNQVELEVMGSNGWVRIGEHPD----LNRVTVFNDQGVVRPSLQSFGERFDTAFTDEV 302 (346)
T ss_dssp EEEEEETTSCEEEEEEEEEESSSCEEEEEEEESSCEEEECSSCB----CSSEEEEETTEEEECBCCCHHHHSHHHHHHHH
T ss_pred EEEEEECCCcEEEEEEEEecCCCCceEEEEEECCCEEEEcCCCC----CccEEEEeCCCcccCCCcchhhHhhHHHHHHH
Confidence 99999999999999999987543 47899999999999986541 11233332222111100 0124688899
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHchhcCCcEEecc
Q 018445 303 KAFIHDISEAKKGINHVPEPRSSFLEGARDVALLEAMLESGSKQGALVHVK 353 (355)
Q Consensus 303 ~~f~~~i~~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~v~~~ 353 (355)
++|+++|+++. .+.++++|+++++++++++++| .++|++|.++
T Consensus 303 ~~f~~~i~~~~-------~~~~~~~~~~~~~~i~~a~~~S-~~~g~~v~~~ 345 (346)
T 3cea_A 303 QDFVNNVIVGK-------QPEVTVDDGIKALKIAKACQQS-ANIGKLVDIQ 345 (346)
T ss_dssp HHHHHHHHHTC-------CCSSCHHHHHHHHHHHHHHHHH-HHHTSCEECC
T ss_pred HHHHHHHhcCC-------CCCCCHHHHHHHHHHHHHHHHH-HHcCCeEecC
Confidence 99999999987 7789999999999999999999 6899999885
No 37
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=100.00 E-value=5.1e-51 Score=368.89 Aligned_cols=296 Identities=17% Similarity=0.150 Sum_probs=245.8
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
++||||||+|.+|..+|++.+.++++ ++++++||+++++++.+++ ++ ++.. | +|+++|++ ++|+|+|+|
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~-~~l~av~d~~~~~~~~~a~---~~--~~~~-~--~~~~~ll~--~~D~V~i~t 74 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSER-FEFVGAFTPNKVKREKICS---DY--RIMP-F--DSIESLAK--KCDCIFLHS 74 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSS-SEEEEEECSCHHHHHHHHH---HH--TCCB-C--SCHHHHHT--TCSEEEECC
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCC-eEEEEEECCCHHHHHHHHH---Hc--CCCC-c--CCHHHHHh--cCCEEEEeC
Confidence 57999999999998558999998876 9999999999999999887 34 5544 4 89999999 699999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHHhCCeeEE
Q 018445 82 AGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAEIGDMMSV 161 (355)
Q Consensus 82 p~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~iG~i~~v 161 (355)
|+..|++++++|+++||||+||||++.+++++++|.+++++ +|+.+++++++||+|.++++|++| |++..+
T Consensus 75 p~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~------~g~~~~v~~~~r~~p~~~~~~~~i---g~~~~~ 145 (308)
T 3uuw_A 75 STETHYEIIKILLNLGVHVYVDKPLASTVSQGEELIELSTK------KNLNLMVGFNRRFCPMYKEIKNNA---TEIVSI 145 (308)
T ss_dssp CGGGHHHHHHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHH------HTCCEEECCGGGGCHHHHHHHHHC---CSEEEE
T ss_pred CcHhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHH------cCCEEEEeeccccCHHHHHHHHHc---CCCcEE
Confidence 99999999999999999999999999999999999999999 599999999999999999999974 777777
Q ss_pred EEEEeeccCCCCCccCccccccccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCceEEEEEEecCCcEEE
Q 018445 162 QVIVEGSMNSSNPYFSSSWRRNFTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISSNFQLENGCSGV 241 (355)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~w~~~~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~G~~~~ 241 (355)
++.+..+ +.+..|+ ++|.++|+|+|.+|+++||+| .|.+|.+..... ...+.+|++.++++|++| .++
T Consensus 146 ~~~~~r~------~~~~~~~---~~g~l~d~g~H~id~~~~l~G-~~~~v~~~~~~~-~~~~~~d~~~~~l~~~~g-~~~ 213 (308)
T 3uuw_A 146 NICKHGL------NSLRNVR---FDSTLIDDYIHVIDTALWLAN-EDVEISGEDLFL-TDNKNLIFVSHKLKGKNF-SIN 213 (308)
T ss_dssp EEEEECS------SCCCSSC---HHHHHHHTHHHHHHHHHHHHC-SCCEEEEEEEEE-CTTSCEEEEEEEEECSSC-EEE
T ss_pred EEEeccC------CCCCccc---cCceeeecchHHHHHHHHHcC-CCceEEEeeeee-cCCCceeEEEEEEEeCCE-EEE
Confidence 7664321 2234675 457999999999999999999 677777765442 223468899999999997 588
Q ss_pred EEEEEecCCCCeEEEEEeeeeEEEEecCCCCCCCceeEEEeCCCCcceeeec------CCCChHHHHHHHHHHHHHhhcC
Q 018445 242 FVMVVSSRSPKIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGADGQSKSMFY------PFSGVTEELKAFIHDISEAKKG 315 (355)
Q Consensus 242 ~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~f~~~i~~~~~~ 315 (355)
+..++..+....+++|+|++|++.++.... +.+...++....... ..++|..++++|+++|+++.
T Consensus 214 ~~~s~~~~~~~~~~~i~G~~G~i~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~F~~~i~~g~-- 284 (308)
T 3uuw_A 214 TSMHRDSGTKLEQVEILSKGKIQRVKNLNV-------LEIEEGGNLTLKQSGAWVNILKQKGFEDISNHFIDCIENNI-- 284 (308)
T ss_dssp EEEETTCSSCEEEEEEEETTEEEEEETTTE-------EEEEETTEEEEEECCTTCCHHHHHTHHHHHHHHHHHHHTTC--
T ss_pred EEEEcCCCCCeEEEEEEECCcEEEEecCce-------EEEEcCCcceecccCCccchhhccchHHHHHHHHHHHhCCC--
Confidence 888888766667999999999999986542 333333222111111 12478999999999999997
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHch
Q 018445 316 INHVPEPRSSFLEGARDVALLEAMLESG 343 (355)
Q Consensus 316 ~~~~~~~~~~~~d~~~~~~i~~a~~~S~ 343 (355)
++.++++|+++++++++++++|+
T Consensus 285 -----~~~~~~~d~~~~~~i~~ai~~S~ 307 (308)
T 3uuw_A 285 -----KPAINGEECIKAQRLLEKIINSV 307 (308)
T ss_dssp -----CCSSCGGGGTHHHHHHHHHHHTC
T ss_pred -----CCCcCHHHHHHHHHHHHHHHHhc
Confidence 88999999999999999999993
No 38
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=100.00 E-value=8.3e-52 Score=382.20 Aligned_cols=328 Identities=16% Similarity=0.164 Sum_probs=254.6
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhc-CCccccccCcchhhhhcCCCccEEEEe
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHF-ADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
++||||||+|.||.. |++.|...++ ++++++||+++++++.+++ ++. +.....| +|+++|++++++|+|+|+
T Consensus 6 ~~~vgiiG~G~ig~~-~~~~l~~~~~-~~lv~v~d~~~~~~~~~a~---~~~~~~~~~~~--~~~~~ll~~~~~D~V~i~ 78 (362)
T 1ydw_A 6 QIRIGVMGCADIARK-VSRAIHLAPN-ATISGVASRSLEKAKAFAT---ANNYPESTKIH--GSYESLLEDPEIDALYVP 78 (362)
T ss_dssp CEEEEEESCCTTHHH-HHHHHHHCTT-EEEEEEECSSHHHHHHHHH---HTTCCTTCEEE--SSHHHHHHCTTCCEEEEC
T ss_pred ceEEEEECchHHHHH-HHHHHhhCCC-cEEEEEEcCCHHHHHHHHH---HhCCCCCCeee--CCHHHHhcCCCCCEEEEc
Confidence 479999999999985 8999988776 9999999999999988876 331 1112333 899999999999999999
Q ss_pred cCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH---hCC
Q 018445 81 LAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE---IGD 157 (355)
Q Consensus 81 tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~---iG~ 157 (355)
||+..|++++++||++||||+||||++.+.+|+++|++++++ +|+.+++++++||+|.++++|++|++ ||+
T Consensus 79 tp~~~h~~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~------~g~~~~~~~~~r~~p~~~~~~~~i~~g~~iG~ 152 (362)
T 1ydw_A 79 LPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEA------NGVQIMDGTMWVHNPRTALLKEFLSDSERFGQ 152 (362)
T ss_dssp CCGGGHHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHT------TTCCEEECCCGGGSGGGTTTTTGGGCTTTTCS
T ss_pred CChHHHHHHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHH------cCCEEEEEEeeccCHHHHHHHHHHHhcCCccc
Confidence 999999999999999999999999999999999999999999 59999999999999999999999974 999
Q ss_pred eeEEEEEEeeccCCCCCccCcccccc---ccCccccchhhHHHHHHHHHhCC-cceeEEEeecccCCCCCCCceEEEEEE
Q 018445 158 MMSVQVIVEGSMNSSNPYFSSSWRRN---FTGGFILDMGVHFIAGLRMITGC-EVVSVSAITSHIDKTLPPPDNISSNFQ 233 (355)
Q Consensus 158 i~~v~~~~~~~~~~~~~~~~~~w~~~---~~gg~l~d~g~H~id~~~~l~G~-~~~~V~a~~~~~~~~~~~~d~~~~~l~ 233 (355)
|..+++.+..+.. ..+...+|+.+ .+||+|+|+|+|.+|+++|++|. .|++|++.........+.+|++.++++
T Consensus 153 i~~v~~~~~~~~~--~~~~~~~wr~~~~~~ggG~l~d~g~H~id~~~~l~g~~~p~~V~a~~~~~~~~~~~~d~~~~~l~ 230 (362)
T 1ydw_A 153 LKTVQSCFSFAGD--EDFLKNDIRVKPGLDGLGALGDAGWYAIRATLLANNFELPKTVTAFPGAVLNEAGVILSCGASLS 230 (362)
T ss_dssp EEEEEEEEEEECC--HHHHHHCGGGCTTSSTTHHHHHTHHHHHHHHHHHTTTCCCSEEEECSCCEECTTSCEEEEEEEEE
T ss_pred eEEEEEEEEecCC--cccccCCcccCcccCCCceeecccHHHHHHHHHhcCCCCCeEEEEeccccccCCCCceEEEEEEE
Confidence 9999988764321 12223457665 36799999999999999999984 599999976433333357889999999
Q ss_pred ecCCcEEEEEEEEecCCCCeEEEEEeeeeEEEEecCCCCCCC-ceeEEEeCCCC------cc----ee-ee-cCCCChHH
Q 018445 234 LENGCSGVFVMVVSSRSPKIFWRVVGMKGTLQVERGNQDGRH-GYLVTQYGADG------QS----KS-MF-YPFSGVTE 300 (355)
Q Consensus 234 ~~~G~~~~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~~~~-~~~~~~~~~~~------~~----~~-~~-~~~~~~~~ 300 (355)
|+||.++++..+|..+ ...+++|+|++|++.++........ ..........+ .+ .. .. ...+.+..
T Consensus 231 ~~~G~~~~~~~s~~~~-~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (362)
T 1ydw_A 231 WEDGRTATIYCSFLAN-LTMEITAIGTKGTLRVHDFIIPYKETEASFTTSTKAWFNDLVTAWVSPPSEHTVKTELPQEAC 309 (362)
T ss_dssp CSSSCEEEEEEESEEE-EEEEEEEEESSEEEEESSCSSCSBTTEEEEEEEESCCBCTTSSSBSSCCEEEEEECSSCHHHH
T ss_pred ECCCCEEEEEEEcccC-CCceEEEEeccEEEEECceeecccCCcceEEEecCccccccccccccCcceeccCCCchHHHH
Confidence 9999999999999874 3478999999999999864321111 11111111110 00 00 01 11122557
Q ss_pred HHHHHHHHH----HHhhcCCCCCCCC-CCCHHHHHHHHHHHHHHHHchhcCC-cEEecc
Q 018445 301 ELKAFIHDI----SEAKKGINHVPEP-RSSFLEGARDVALLEAMLESGSKQG-ALVHVK 353 (355)
Q Consensus 301 ~~~~f~~~i----~~~~~~~~~~~~~-~~~~~d~~~~~~i~~a~~~S~~~~g-~~v~~~ 353 (355)
++++|+++| +++. .+ ..+.+++++++++++|+++| .++| ++|.++
T Consensus 310 ~~~~f~~~i~~i~~~g~-------~~~~~~~~~~l~~~~ii~a~~~S-~~~g~~~V~l~ 360 (362)
T 1ydw_A 310 MVREFARLVGEIKNNGA-------KPDGYWPSISRKTQLVVDAVKES-VDKNYQQISLS 360 (362)
T ss_dssp HHHHHTTCC-------------------CHHHHHHHHHHHHHHHHHH-HHTTTCCEECC
T ss_pred HHHHHHHHHhhhhhcCC-------CCCCcCHHHHHHHHHHHHHHHHH-HHcCCeEEEec
Confidence 899999988 5554 33 45679999999999999999 5787 899985
No 39
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=100.00 E-value=1.7e-50 Score=368.14 Aligned_cols=309 Identities=18% Similarity=0.187 Sum_probs=246.0
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
+|||||||+|.+|.. |++.+.+.++ ++++++||+++++++.+++ ++ +....| +|+++|+ ++++|+|+|+|
T Consensus 1 ~~~vgiiG~G~~g~~-~~~~l~~~~~-~~~~~v~d~~~~~~~~~~~---~~--~~~~~~--~~~~~~l-~~~~D~V~i~t 70 (325)
T 2ho3_A 1 MLKLGVIGTGAISHH-FIEAAHTSGE-YQLVAIYSRKLETAATFAS---RY--QNIQLF--DQLEVFF-KSSFDLVYIAS 70 (325)
T ss_dssp CEEEEEECCSHHHHH-HHHHHHHTTS-EEEEEEECSSHHHHHHHGG---GS--SSCEEE--SCHHHHH-TSSCSEEEECS
T ss_pred CeEEEEEeCCHHHHH-HHHHHHhCCC-eEEEEEEeCCHHHHHHHHH---Hc--CCCeEe--CCHHHHh-CCCCCEEEEeC
Confidence 379999999999986 8999988776 9999999999999988765 33 333334 8999999 78899999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHHhCCeeEE
Q 018445 82 AGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAEIGDMMSV 161 (355)
Q Consensus 82 p~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~iG~i~~v 161 (355)
|+..|.+++++|+++||||+||||++.+.+++++|.+++++ +|+.+++++++||+|.++.+|++|++ |+|..+
T Consensus 71 p~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~------~g~~~~~~~~~r~~p~~~~~~~~i~~-G~i~~v 143 (325)
T 2ho3_A 71 PNSLHFAQAKAALSAGKHVILEKPAVSQPQEWFDLIQTAEK------NNCFIFEAARNYHEKAFTTIKNFLAD-XQVLGA 143 (325)
T ss_dssp CGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHH------TTCCEEEECTTTTCHHHHHHHHHHTT-SCEEEE
T ss_pred ChHHHHHHHHHHHHcCCcEEEecCCcCCHHHHHHHHHHHHH------cCCEEEEEEhhhcChHHHHHHHHhhh-cCccEE
Confidence 99999999999999999999999999999999999999999 59999999999999999999999999 999999
Q ss_pred EEEEeeccCCCCCccC--ccc--cccccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCceEEEEEEecCC
Q 018445 162 QVIVEGSMNSSNPYFS--SSW--RRNFTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISSNFQLENG 237 (355)
Q Consensus 162 ~~~~~~~~~~~~~~~~--~~w--~~~~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~G 237 (355)
++.+..+..+...+.. .+| ..+.+||.++|+|+|.+|+++|++| .|.+|++....... +.+|++.++++|+||
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~l~d~g~H~ld~~~~l~G-~~~~v~a~~~~~~~--~~~d~~~~~l~~~~g 220 (325)
T 2ho3_A 144 DFNYAKYSSKMPDLLAGQTPNVFSDRFAGGALMDLGIYPLYAAVRLFG-KANDATYHAQQLDN--SIDLNGDGILFYPDY 220 (325)
T ss_dssp EEEEECCCCC------------------CCHHHHTTHHHHHHHHHHHC-SCSEEEEEEEECTT--SCEEEEEEEEECSSC
T ss_pred EEEeccccccccccccCcccccCCcCCCCcchhhhHHHHHHHHHHHcC-CCcEEEEEEeecCC--CccceEEEEEEeCCc
Confidence 9887643222222111 123 3336899999999999999999999 79999998765443 467899999999998
Q ss_pred cEEEEEEEEecCCCCeEEEEEeeeeEEEEecCCCCCCCceeEEEeCCCCcceeee--cCCCChHHHHHHHHHHHHHhhcC
Q 018445 238 CSGVFVMVVSSRSPKIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGADGQSKSMF--YPFSGVTEELKAFIHDISEAKKG 315 (355)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~f~~~i~~~~~~ 315 (355)
. +++..++..+. ..+++|+|++|++.++..... ..+.+...++...... ...++|..++++|+++|+++.
T Consensus 221 ~-~~~~~~~~~~~-~~~~~i~G~~G~i~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~e~~~f~~~i~~g~-- 292 (325)
T 2ho3_A 221 Q-VHIKAGKNITS-NLPCEIYTTDGTLTLNTIEHI----RSAIFTDHQGNQVQLPIQQAPHTMTEEVAAFAHMIQQPD-- 292 (325)
T ss_dssp E-EEEEEESSSCC-CCCEEEEETTEEEEESCSSSC----CCEEEEETTSCEEECCCCCCSSTTHHHHHHHHHHHHSCC--
T ss_pred E-EEEEEEEecCC-CCeEEEEeCCeEEEECCcCCC----ceEEEEeCCCCEEEEecCCcCcchHHHHHHHHHHHHcCC--
Confidence 4 67888876544 345999999999999765421 1233333333322211 224689999999999999886
Q ss_pred CCCCCC--CCCCHHHHHHHHHHHHHHHHch
Q 018445 316 INHVPE--PRSSFLEGARDVALLEAMLESG 343 (355)
Q Consensus 316 ~~~~~~--~~~~~~d~~~~~~i~~a~~~S~ 343 (355)
. +..++++++.++++++++++|+
T Consensus 293 -----~~~~~~~~~~~~~~~~i~~a~~~s~ 317 (325)
T 2ho3_A 293 -----LNLYQTWLYDAGSVHELLYTMRQTA 317 (325)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----ccCCCccHHHHHHHHHHHHHHHHHC
Confidence 3 3678999999999999999994
No 40
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=100.00 E-value=2.2e-51 Score=388.58 Aligned_cols=333 Identities=15% Similarity=0.134 Sum_probs=257.0
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh-cCCccccccCc----chhhhhcCCCccE
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH-FADVECVWGDN----GLEQIIKEDSILG 76 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~ell~~~~~D~ 76 (355)
++||||||+|.+|.. |++.|.++++ ++|++|||+++++++.+++...++ .|.. ..| + |+++||+++++|+
T Consensus 20 ~~rvgiIG~G~~g~~-h~~~l~~~~~-~~lvav~d~~~~~~~~~a~~~~~~g~~~~-~~~--~~~~~~~~~ll~~~~vD~ 94 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQT-HVENMARRDD-VEIVAFADPDPYMVGRAQEILKKNGKKPA-KVF--GNGNDDYKNMLKDKNIDA 94 (444)
T ss_dssp CEEEEEECCSHHHHH-HHHHHHTCTT-EEEEEEECSCHHHHHHHHHHHHHTTCCCC-EEE--CSSTTTHHHHTTCTTCCE
T ss_pred CceEEEEecCHHHHH-HHHHHHhCCC-cEEEEEEeCCHHHHHHHHHHHHhcCCCCC-cee--ccCCCCHHHHhcCCCCCE
Confidence 579999999999986 9999998876 999999999999999988754333 1222 233 6 9999999999999
Q ss_pred EEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH--
Q 018445 77 VAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE-- 154 (355)
Q Consensus 77 V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~-- 154 (355)
|+|+||+..|++++++||++||||+||||++.|++|+++|++++++ +|+.++|++++||.|.++.+|++|++
T Consensus 95 V~i~tp~~~h~~~~~~al~aGkhV~~EKP~a~~~~ea~~l~~~a~~------~g~~~~v~~~~r~~p~~~~~~~~i~~G~ 168 (444)
T 2ixa_A 95 VFVSSPWEWHHEHGVAAMKAGKIVGMEVSGAITLEECWDYVKVSEQ------TGVPLMALENVCYRRDVMAILNMVRKGM 168 (444)
T ss_dssp EEECCCGGGHHHHHHHHHHTTCEEEECCCCCSSHHHHHHHHHHHHH------HCCCEEECCGGGGCHHHHHHHHHHHTTT
T ss_pred EEEcCCcHHHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHH------hCCeEEEEeccccCHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999999 49999999999999999999999996
Q ss_pred hCCeeEEEEEEeeccC----CCC--------------CccCccccccc------------cCc-cccchhhHHHHHHHHH
Q 018445 155 IGDMMSVQVIVEGSMN----SSN--------------PYFSSSWRRNF------------TGG-FILDMGVHFIAGLRMI 203 (355)
Q Consensus 155 iG~i~~v~~~~~~~~~----~~~--------------~~~~~~w~~~~------------~gg-~l~d~g~H~id~~~~l 203 (355)
||+|+++++.+..++. .+. .+...+|+.+. +|| ++.|+++|.+|+++||
T Consensus 169 iG~i~~v~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~g~~~~~~ggG~vl~d~giH~~D~~~~l 248 (444)
T 2ixa_A 169 FGELVHGTGGYQHDLRPVLFNSGINGKNGDGVEFGEKAFSEAKWRTNHYKNRNGELYPTHGVGPLHTMMDINRGNRLLRL 248 (444)
T ss_dssp TCSEEEEEECCBCCCHHHHCBCSCTTCCSSCCBCSTTSCGGGGTHHHHHHHCCSCCCCHHHHHHHHHHHTBTTTBCEEEE
T ss_pred CCCeEEEEEEEeccchhhhcccccccccccccccccccccCCCcccchhhccCCCcccccccCHHHHhhcccccchhhee
Confidence 9999999987653221 100 01224687641 345 5999999999999999
Q ss_pred hCC--cceeEEEeeccc----CC----CCCCCceEEEEEEecCCcEEEEEEEEecCCC-CeEEEEEeeeeEEEEecCCCC
Q 018445 204 TGC--EVVSVSAITSHI----DK----TLPPPDNISSNFQLENGCSGVFVMVVSSRSP-KIFWRVVGMKGTLQVERGNQD 272 (355)
Q Consensus 204 ~G~--~~~~V~a~~~~~----~~----~~~~~d~~~~~l~~~~G~~~~~~~~~~~~~~-~~~~~i~G~~G~i~~~~~~~~ 272 (355)
+|. ++..|++..... .+ ..+.+|.+.++++|+||++++++.+|..+.. ..+++|+|++|++.++.....
T Consensus 249 ~g~~~~~~~v~a~~~~~~~~~~~~~~~~~~~~D~~~~~l~~~~G~~~~~~~s~~~~~~~~~~~~v~Gt~G~i~~~~~~~~ 328 (444)
T 2ixa_A 249 SSFASKARGLHKYIVDKGGESHPNAKVEWKQGDIVTTQIQCHNGETIVLTHDTSLQRPYNLGFKVQGTEGLWEDFGWGEA 328 (444)
T ss_dssp EEEECCCCHHHHHHHHHHCTTSGGGGCCCCSCSCEEEEEEETTSCEEEEEEBCSSCCCCCCCCEEEESSCEEEECSSSCT
T ss_pred ecccccccchhhhHHHhcCCCCcccccccccCceeEEEEEECCCCEEEEEEEeccCCCCCceEEEEEeeeEEEecccccC
Confidence 993 344454433211 11 1346899999999999999999999987654 367999999999998654211
Q ss_pred CCCceeEEEeCCCC---cceee--e--cCCCChHHH-----------------HHHHHHHHHHhhcCCCCCCCCCCCHHH
Q 018445 273 GRHGYLVTQYGADG---QSKSM--F--YPFSGVTEE-----------------LKAFIHDISEAKKGINHVPEPRSSFLE 328 (355)
Q Consensus 273 ~~~~~~~~~~~~~~---~~~~~--~--~~~~~~~~~-----------------~~~f~~~i~~~~~~~~~~~~~~~~~~d 328 (355)
. ...+.+....+ .+... . ...+++..+ +.+|+++|+++. ++.++++|
T Consensus 329 ~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~gh~g~~~~~~~~fi~~i~~g~-------~~~~~~~d 399 (444)
T 2ixa_A 329 A--QGFIYFEKIMNHSHRWDSSEKWIKEYDHPMWKKHEQKAVGAGHGGMDYFLDNTFVECIKRNE-------AFPLDVYD 399 (444)
T ss_dssp T--SEEEECTTTTTTCCSCEESHHHHHHTCCHHHHHHHHHHSTTSCCTHHHHHHHHHHHHHHHTC-------CCSSCHHH
T ss_pred C--CceEEecCCCCCccccccchhhHHhcCChhhhhhhhhcccCCCCCccHHHHHHHHHHHhcCC-------CCCCCHHH
Confidence 0 10122222111 11100 0 001233333 458999999997 88999999
Q ss_pred HHHHHHHHHHHHHchhcCC-cEEeccCC
Q 018445 329 GARDVALLEAMLESGSKQG-ALVHVKKF 355 (355)
Q Consensus 329 ~~~~~~i~~a~~~S~~~~g-~~v~~~~~ 355 (355)
+++++++++++++|+ ++| ++|.|++|
T Consensus 400 a~~~~~i~~aa~~Sa-~~gg~~V~ip~~ 426 (444)
T 2ixa_A 400 LATWYSITPLSEKSI-AENGAVQEIPDF 426 (444)
T ss_dssp HHHHHHHHHHHHHHH-HTTTCCEECCCT
T ss_pred HHHHHHHHHHHHHHH-HcCCceeecccc
Confidence 999999999999995 666 99999876
No 41
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=100.00 E-value=5.6e-50 Score=363.06 Aligned_cols=296 Identities=18% Similarity=0.225 Sum_probs=244.9
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
++||||||+|.+|.. |++.|.+.++ ++++++||+++++++.+++ .+. .| +|++++++++++|+|+|+|
T Consensus 10 ~~~igiIG~G~~g~~-~~~~l~~~~~-~~~v~v~d~~~~~~~~~~~-------~~~-~~--~~~~~~l~~~~~D~V~i~t 77 (315)
T 3c1a_A 10 PVRLALIGAGRWGKN-YIRTIAGLPG-AALVRLASSNPDNLALVPP-------GCV-IE--SDWRSVVSAPEVEAVIIAT 77 (315)
T ss_dssp CEEEEEEECTTTTTT-HHHHHHHCTT-EEEEEEEESCHHHHTTCCT-------TCE-EE--SSTHHHHTCTTCCEEEEES
T ss_pred cceEEEECCcHHHHH-HHHHHHhCCC-cEEEEEEeCCHHHHHHHHh-------hCc-cc--CCHHHHhhCCCCCEEEEeC
Confidence 589999999999975 9999998776 9999999999998876554 122 33 8999999988899999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHHhCCeeEE
Q 018445 82 AGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAEIGDMMSV 161 (355)
Q Consensus 82 p~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~iG~i~~v 161 (355)
|+..|.+++++|+++||||+||||++.+.+++++|.+++++ +|+.+++++++||+|.++++|++|+.||+|..+
T Consensus 78 p~~~h~~~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~------~g~~~~~~~~~r~~p~~~~~~~~i~~lG~i~~v 151 (315)
T 3c1a_A 78 PPATHAEITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKA------TGVMVWVEHTQLFNPAWEALKADLTSIGPILAV 151 (315)
T ss_dssp CGGGHHHHHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHH------HCCCEEEECGGGGCHHHHHHHHTHHHHCSEEEE
T ss_pred ChHHHHHHHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHH------cCCEEEEeechhcCHHHHHHHHHHHHcCCeEEE
Confidence 99999999999999999999999999999999999999999 499999999999999999999999999999999
Q ss_pred EEEEeeccCCCCCccCccccccccCccccchhhHHHHHHHHHhCCcceeEEEeecccCC-CCCCCceEEEEEEecCCcEE
Q 018445 162 QVIVEGSMNSSNPYFSSSWRRNFTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDK-TLPPPDNISSNFQLENGCSG 240 (355)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~w~~~~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~-~~~~~d~~~~~l~~~~G~~~ 240 (355)
++.+. ...+| ...|||.++|+|+|.+|+++|++|.+|++|++....... ..+.+|++.++++| ||.++
T Consensus 152 ~~~~~---------~~~~~-~~~ggG~l~d~g~H~id~~~~l~G~~~~~v~a~~~~~~~~~~~~~d~~~~~l~~-~g~~~ 220 (315)
T 3c1a_A 152 RSEAG---------NHGPY-RPGGVPMLWDWGAHDVSMVLDLMGRDPDSTSASWAARGEKDGGEAGDVTLTLAF-STVEA 220 (315)
T ss_dssp EEEEE---------EECCC-CTTCCCHHHHHHHHHHHHHHHHHSSCCSEEEEEEEEEEEETTEEEEEEEEEEEE-TTEEE
T ss_pred EEEEe---------cCCCc-cccCCcchhhhhchHHHHHHHHhCCCCcEEEEEeEeecCCCCCCCceEEEEEEE-CCEEE
Confidence 98751 01235 224789999999999999999999669999998754321 13468999999999 99999
Q ss_pred EEEEEEecCCCCeEEEEEeeeeEEEEecCCCCCCCceeEEEeCC-------CCccee-eecCCCChHHHHHHHHHHHHHh
Q 018445 241 VFVMVVSSRSPKIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGA-------DGQSKS-MFYPFSGVTEELKAFIHDISEA 312 (355)
Q Consensus 241 ~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~f~~~i~~~ 312 (355)
++..+ ..+....+++|+|++|++.++..... .+..... .+.... .....++|..++++|+++|+++
T Consensus 221 ~~~~s-~~~~~~~~~~i~G~~G~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~~ 294 (315)
T 3c1a_A 221 HIRLC-NTMDKCRRLAVFGEAGTLVMDDRATD-----KLTLHPPQPDGNWPVGQGHALTVTDEMPLTRAVRLFAGAVRQP 294 (315)
T ss_dssp EEEEE-SEEEEEEEEEEEESSCEEEEETTSSS-----SSEEECCCSSCCCCCSCCEECCCCCCCHHHHHHHHHHHHTTSC
T ss_pred EEEEe-cCCCCCceEEEEecccEEEEccCCCc-----eEEEEcCCcccccCCCcccccCCCccchHHHHHHHHHHHHhcC
Confidence 99999 55445578999999999999865421 1111111 010111 1122467899999999999998
Q ss_pred hcCCCCCCCCCCCHHHHHHHHHHHHHH
Q 018445 313 KKGINHVPEPRSSFLEGARDVALLEAM 339 (355)
Q Consensus 313 ~~~~~~~~~~~~~~~d~~~~~~i~~a~ 339 (355)
. .+.++++|+++++++++++
T Consensus 295 ~-------~~~~~~~~~~~~~~i~~a~ 314 (315)
T 3c1a_A 295 E-------PGPSPLELGLRVVRVLGAC 314 (315)
T ss_dssp C-------CCSSBHHHHHHHHHHHHHH
T ss_pred C-------CCCCCHHHHHHHHHHHHhh
Confidence 7 7889999999999999987
No 42
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.4e-49 Score=359.83 Aligned_cols=284 Identities=15% Similarity=0.144 Sum_probs=231.4
Q ss_pred CceEEEEec-ccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhh---------cC
Q 018445 2 APRIAILGA-GIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQII---------KE 71 (355)
Q Consensus 2 ~~rigiiG~-G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell---------~~ 71 (355)
.+||||||+ |.++.. |++++.+. + .+|+++||++++++ .++ +.+++.. .| +|+++|+ ++
T Consensus 3 mirvgiIG~gG~i~~~-h~~~l~~~-~-~~lvav~d~~~~~~-~~~----~~~~~~~-~~--~~~~~ll~~~~~l~~~~~ 71 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPR-HMRAIKDT-G-NCLVSAYDINDSVG-IID----SISPQSE-FF--TEFEFFLDHASNLKRDSA 71 (318)
T ss_dssp CCEEEEETTTSSSHHH-HHHHHHHT-T-CEEEEEECSSCCCG-GGG----GTCTTCE-EE--SSHHHHHHHHHHHTTSTT
T ss_pred ceEEEEECCCcHHHHH-HHHHHHhC-C-CEEEEEEcCCHHHH-HHH----hhCCCCc-EE--CCHHHHHHhhhhhhhccC
Confidence 379999999 678975 99999986 4 79999999998874 222 3444543 33 8999999 47
Q ss_pred CCccEEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHH
Q 018445 72 DSILGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKL 151 (355)
Q Consensus 72 ~~~D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~ 151 (355)
+++|+|+|+||+..|++++++||++|||||||||++.|++|+++|++++++ +|+.+++++++||+|.++++|++
T Consensus 72 ~~vD~V~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~------~g~~~~v~~~~R~~p~~~~~k~~ 145 (318)
T 3oa2_A 72 TALDYVSICSPNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERE------TDKRLYNILQLRHHQAIIALKDK 145 (318)
T ss_dssp TSCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHH------HTCCEEECCGGGGCHHHHHHHHH
T ss_pred CCCcEEEECCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHH------hCCEEEEEEhhhcCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 59999999999999999999999
Q ss_pred HHH--hCCeeEEEEEEeeccCCCCCccCcccccc--ccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCce
Q 018445 152 IAE--IGDMMSVQVIVEGSMNSSNPYFSSSWRRN--FTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDN 227 (355)
Q Consensus 152 i~~--iG~i~~v~~~~~~~~~~~~~~~~~~w~~~--~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~ 227 (355)
|++ ||+|+.+++.+..+. .+++..+|+.+ .+||.++|+|+|.+|+++|++| .|.+|.+.. ..+|+
T Consensus 146 i~~g~iG~i~~v~~~~~~~~---~~~~~~~w~~~~~~~gG~l~d~g~H~id~~~~l~G-~~~~v~~~~-------~~~d~ 214 (318)
T 3oa2_A 146 VAREKSPHKYEVDLTYITSR---GNWYLKSWKGDPRKSFGVATNIGVHFYDMLHFIFG-KLQRNVVHF-------TSEYK 214 (318)
T ss_dssp HHHS-CSSCEEEEEEEEECC---CHHHHHSGGGCHHHHCCHHHHHHHHHHHHHHHHHC-SEEEEEEEE-------ECSSE
T ss_pred HhcCCCCceEEEEEEEEecC---CCCCCcccccCCCcCCCccccCCcHHHHHHHHHhC-CCceEEEEe-------cCCcE
Confidence 997 999999999876422 12223467765 7899999999999999999999 788888764 25789
Q ss_pred EEEEEEecCCcEEEEEEEEecCCCCeEEEEEeeeeEEEEecCCCCCCCceeEEEeCCCCcceeeecCCCChHHHHHHHHH
Q 018445 228 ISSNFQLENGCSGVFVMVVSSRSPKIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGADGQSKSMFYPFSGVTEELKAFIH 307 (355)
Q Consensus 228 ~~~~l~~~~G~~~~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 307 (355)
+.++++|++|....+ +++... ...+ +|+|++|++.....+. . ...-.++|..+...|++
T Consensus 215 ~~~~l~~~~g~~~~~-~s~~~~-~~~~-~i~G~~G~~~~~~~d~---------------q---e~~~~~g~~~~~~~~~~ 273 (318)
T 3oa2_A 215 TAGYLEYEQARVRWF-LSVDAN-DLPE-SVKGKKPTYRSITVNG---------------E---EMEFSEGFTDLHTTSYE 273 (318)
T ss_dssp EEEEEEETTEEEEEE-EECCGG-GSCT-TTTTTCSEEEEEEETT---------------E---ECCC-----CHHHHHHH
T ss_pred EEEEEEeCCCeEEEE-EEecCC-CCCe-EEEecCcEEEEEeECc---------------c---HHHHhcCCchhhHHHHH
Confidence 999999999976655 555432 2233 9999999998764322 0 01122579999999999
Q ss_pred HHHHhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHch
Q 018445 308 DISEAKKGINHVPEPRSSFLEGARDVALLEAMLESG 343 (355)
Q Consensus 308 ~i~~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~ 343 (355)
+|+.|+ .+ +++|+..+++++++++.+.
T Consensus 274 ~i~~g~-------~~--~~~da~~~~~i~~~i~~~~ 300 (318)
T 3oa2_A 274 EILAGR-------GY--GIDDARHCVETVNTIRSAV 300 (318)
T ss_dssp HHHTTC-------CC--CHHHHHHHHHHHHHHHHCC
T ss_pred HHHcCC-------CC--CHHHHHHHHHHHHHHhcCC
Confidence 999885 44 8999999999999999883
No 43
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=100.00 E-value=7.5e-49 Score=357.07 Aligned_cols=276 Identities=21% Similarity=0.268 Sum_probs=228.1
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcC-CCccEEEEe
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKE-DSILGVAVV 80 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~-~~~D~V~I~ 80 (355)
++||||||+|.+|...|++.+.+.++ ++|+|+||+++++ + +++ .| +|+++||++ +++|+|+|+
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~~-~~lvav~d~~~~~----------~--g~~-~~--~~~~~ll~~~~~vD~V~i~ 88 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNAN-FKLVATASRHGTV----------E--GVN-SY--TTIEAMLDAEPSIDAVSLC 88 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCTT-EEEEEEECSSCCC----------T--TSE-EE--SSHHHHHHHCTTCCEEEEC
T ss_pred CceEEEEecCHHHHHHHHHHHHhCCC-eEEEEEEeCChhh----------c--CCC-cc--CCHHHHHhCCCCCCEEEEe
Confidence 37999999999997449999999887 9999999999653 2 555 33 899999998 999999999
Q ss_pred cCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHHhCCeeE
Q 018445 81 LAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAEIGDMMS 160 (355)
Q Consensus 81 tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~iG~i~~ 160 (355)
||+..|++++++||++|||||||||++.+++|+++|++++++ +|+.+++++++||.|.++++|++|++ |+|-.
T Consensus 89 tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~------~g~~~~v~~~~r~~p~~~~~k~~i~~-g~iG~ 161 (330)
T 4ew6_A 89 MPPQYRYEAAYKALVAGKHVFLEKPPGATLSEVADLEALANK------QGASLFASWHSRYAPAVEAAKAFLAS-TTIKS 161 (330)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHH------HTCCEEECCGGGGSTTHHHHHHHHHS-SCEEE
T ss_pred CCcHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHh------cCCeEEEEehhhccHHHHHHHHHHhc-CCceE
Confidence 999999999999999999999999999999999999999999 49999999999999999999999998 44444
Q ss_pred EEEEEeeccCCCCCccCccccccccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCceEEEEEEecCCcEE
Q 018445 161 VQVIVEGSMNSSNPYFSSSWRRNFTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISSNFQLENGCSG 240 (355)
Q Consensus 161 v~~~~~~~~~~~~~~~~~~w~~~~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~G~~~ 240 (355)
+++.+......+.+ ...|+.+.+||.++|+|+|.+|+++|++| .|.+|.+.........+.+|++.+.+++++|..+
T Consensus 162 v~~~~~~~~~~~~~--~~~w~~~~ggG~l~d~g~H~ld~~~~l~g-~~~~v~~~~~~~~~~~~~~~~a~l~~~~~~g~~~ 238 (330)
T 4ew6_A 162 VHVIWKEDVRHWHP--NQDWIWQAGGLGVFDPGINALSIVTHILP-RPVFITGAVLEFPENRDAPIAADIHFRDADGLPV 238 (330)
T ss_dssp EEEEEECBHHHHST--TCSGGGSTTSCTTHHHHHHHHHHHHHHSS-SCCEEEEEEEEEEESCSSCSEEEEEEECTTCCEE
T ss_pred EEEEEccCccccCC--CCCceEcCCCcEEEEchhHHHHHHHHHcC-CCeEEEEEEEecCCCCcccEEEEEEEEcCCceEE
Confidence 44444332211111 24688788999999999999999999999 7899988776555555678999999999999999
Q ss_pred EEEEEEecCCC-CeEEEEEeeeeEEEEecCCCCCCCceeEEEeCCCCcceeeecCCCChHHHHHHHHHHHHHhh
Q 018445 241 VFVMVVSSRSP-KIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGADGQSKSMFYPFSGVTEELKAFIHDISEAK 313 (355)
Q Consensus 241 ~~~~~~~~~~~-~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~~~ 313 (355)
++..+|..+.. ...++|+|++|++.++.... .+.. ++. .....+.+.|..++++|+++|++|.
T Consensus 239 ~~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~------~l~~---~g~-~~~~~~~~~y~~~~~~F~~~v~~g~ 302 (330)
T 4ew6_A 239 HAEFDWRQTGKQSWDIVAETAAGQMVLSEGGA------KLSI---DGR-LTFAEPEQEYPSLYRRFAEIIKAGK 302 (330)
T ss_dssp EEEEESBCCSSCEEEEEEEESSCCEEEETTTT------EEEE---TTC-CC--CCCCHHHHHHHHHHHHHHHTC
T ss_pred EEEEEeccCCCCceEEEEEeCCEEEEEECCcc------EEEE---CCE-EEecCCCcchHHHHHHHHHHHHcCC
Confidence 99999977653 36899999999999996532 3322 122 2234455789999999999999986
No 44
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=100.00 E-value=1.6e-48 Score=354.69 Aligned_cols=302 Identities=16% Similarity=0.141 Sum_probs=241.5
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEe
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
|++||||||+|.||...|++.|.+.++ ++|+ +||+++++++.+++ ++ ++...+ .++.+++ ++++|+|+|+
T Consensus 1 m~~~igiIG~G~ig~~~~~~~l~~~~~-~~l~-v~d~~~~~~~~~a~---~~--g~~~~~--~~~~~~l-~~~~D~V~i~ 70 (323)
T 1xea_A 1 MSLKIAMIGLGDIAQKAYLPVLAQWPD-IELV-LCTRNPKVLGTLAT---RY--RVSATC--TDYRDVL-QYGVDAVMIH 70 (323)
T ss_dssp -CEEEEEECCCHHHHHTHHHHHTTSTT-EEEE-EECSCHHHHHHHHH---HT--TCCCCC--SSTTGGG-GGCCSEEEEC
T ss_pred CCcEEEEECCCHHHHHHHHHHHHhCCC-ceEE-EEeCCHHHHHHHHH---Hc--CCCccc--cCHHHHh-hcCCCEEEEE
Confidence 889999999999997448999988776 8999 99999999998876 34 443323 5666777 6789999999
Q ss_pred cCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH--hCCe
Q 018445 81 LAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--IGDM 158 (355)
Q Consensus 81 tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--iG~i 158 (355)
||+..|.+++++||++||||+||||++.+++++++|.+++++ +|+.+++++++||+|.++++|++|++ ||+|
T Consensus 71 tp~~~h~~~~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~------~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i 144 (323)
T 1xea_A 71 AATDVHSTLAAFFLHLGIPTFVDKPLAASAQECENLYELAEK------HHQPLYVGFNRRHIPLYNQHLSELAQQECGAL 144 (323)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHH------TTCCEEEECGGGCCHHHHHHCHHHHHTSCTTC
T ss_pred CCchhHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHh------cCCeEEEeeccccCHHHHHHHHHHhcCCcCCc
Confidence 999999999999999999999999999999999999999999 59999999999999999999999997 9999
Q ss_pred eEEEEEEeeccCCCCCccCccccccccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCceEEEEEEecCCc
Q 018445 159 MSVQVIVEGSMNSSNPYFSSSWRRNFTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISSNFQLENGC 238 (355)
Q Consensus 159 ~~v~~~~~~~~~~~~~~~~~~w~~~~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~G~ 238 (355)
..+++.+..+.. +..| +|.++|+|+|.+|+++|++|.+|++|++..... .+|...++++|++|.
T Consensus 145 ~~v~~~~~~~~~------p~~~-----~g~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~-----~~d~~~~~~~~~~g~ 208 (323)
T 1xea_A 145 RSLRWEKHRHAL------PGDI-----RTFVFDDFIHPLDSVNLSRQCNLDDLHLTYHMS-----EGLLARLDVQWQTGD 208 (323)
T ss_dssp SEEEEEEECBSC------CBCH-----HHHHHTTTHHHHHHHCTTCCCSCTTEEEEEEEE-----TTEEEEEEEEEEETT
T ss_pred eEEEEEecCCCC------cccc-----hhhhhhcceeHHHHHHHHhCCCceEEEEEEeec-----CCceEEEEEEEcCCC
Confidence 999887542211 1223 468999999999999999997689999987543 356777888888774
Q ss_pred -EEEEEEEEecCCCCeEEEEEeeeeEEEEecCCCCCCCceeEEEeCCC----CcceeeecCCCChHHHHHHHHHHHHHhh
Q 018445 239 -SGVFVMVVSSRSPKIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGAD----GQSKSMFYPFSGVTEELKAFIHDISEAK 313 (355)
Q Consensus 239 -~~~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~f~~~i~~~~ 313 (355)
++++..++..+....+++|+|++|++.++..... ..+...... ..+. .....++|..++++|+++|+++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~f~~~i~~g~ 283 (323)
T 1xea_A 209 TLLHASMNRQFGITTEHVTASYDNVAYLFDSFTQG----KMWRDNQESRVALKDWT-PMLASKGFDAMVQDWLQVAAAGK 283 (323)
T ss_dssp EEEEEEEETTBSSCEEEEEEEETTEEEEESSSSEE----EEEETTEEEEEECCTTC-CHHHHTTHHHHHHHHHHHHHHTC
T ss_pred EEEEEEEEecCCCceEEEEEEECCcEEEEecCccc----ceEeeccCCccccCCcC-chhhhccHHHHHHHHHHHHHcCC
Confidence 6777766655445578999999999999765421 001110000 0000 01123578999999999999997
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHHHHchhcCC
Q 018445 314 KGINHVPEPRSSFLEGARDVALLEAMLESGSKQG 347 (355)
Q Consensus 314 ~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g 347 (355)
.+.++++|+++++++++++++| +++|
T Consensus 284 -------~~~~~~~d~l~~~~i~~a~~~s-~~~g 309 (323)
T 1xea_A 284 -------LPTHIIERNLASHQLAEAICQQ-ITQQ 309 (323)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHHH-HHHH
T ss_pred -------CCCCCHHHHHHHHHHHHHHHHH-hhhc
Confidence 7888999999999999999999 5666
No 45
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=100.00 E-value=4.5e-47 Score=344.69 Aligned_cols=298 Identities=18% Similarity=0.198 Sum_probs=233.2
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
+||||||+|.+|...|++.+.+.++ ++|+++||+++++++.+++ ++ +++ .| +++++| ++++|+|+|+||
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~-~~lvav~d~~~~~~~~~~~---~~--g~~-~~--~~~~~l--~~~~D~V~i~tp 74 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASD-WTLQGAWSPTRAKALPICE---SW--RIP-YA--DSLSSL--AASCDAVFVHSS 74 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSS-EEEEEEECSSCTTHHHHHH---HH--TCC-BC--SSHHHH--HTTCSEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCC-eEEEEEECCCHHHHHHHHH---Hc--CCC-cc--CcHHHh--hcCCCEEEEeCC
Confidence 6999999999997548888887776 9999999999999998876 33 443 33 888887 467999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHHhCCeeEEE
Q 018445 83 GQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAEIGDMMSVQ 162 (355)
Q Consensus 83 ~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~iG~i~~v~ 162 (355)
+..|.+++++|+++||||+||||++.+++++++|.+++++ +|+.+++++++||+|.++++|++| |++..++
T Consensus 75 ~~~h~~~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~------~g~~~~~~~~~r~~p~~~~~k~~i---~~~~~i~ 145 (319)
T 1tlt_A 75 TASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAAR------KKLTLMVGFNRRFAPLYGELKTQL---ATAASLR 145 (319)
T ss_dssp TTHHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHH------TTCCEEEECGGGGCHHHHHHTTTG---GGCCEEE
T ss_pred chhHHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHH------cCCeEEEeeecccCHHHHHHHHHh---CCCcEEE
Confidence 9999999999999999999999999999999999999999 599999999999999999999996 5565665
Q ss_pred EEEeeccCCCCCccCccccccccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCceEEEEEEecCCcEEEE
Q 018445 163 VIVEGSMNSSNPYFSSSWRRNFTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISSNFQLENGCSGVF 242 (355)
Q Consensus 163 ~~~~~~~~~~~~~~~~~w~~~~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~G~~~~~ 242 (355)
+.+... ..+ .+| ..+|.++|+|+|.+|+++||+| .+++|++...... +.+|...++++|++|. +++
T Consensus 146 ~~~~~~----~~~--~p~---~~~g~l~d~g~H~id~~~~l~G-~~~~V~a~~~~~~---~~~d~~~~~~~~~~g~-~~~ 211 (319)
T 1tlt_A 146 MDKHRS----NSV--GPH---DLYFTLLDDYLHVVDTALWLSG-GKASLDGGTLLTN---DAGEMLFAEHHFSAGP-LQI 211 (319)
T ss_dssp EEECCS----SCC--CSS---CHHHHHHHTHHHHHHHHHHHTT-TCCCEEEEEEEEC---TTCCEEEEEEEEEETT-EEE
T ss_pred EEecCC----Ccc--CCC---CCCceeecccccHHHHHHHHcC-CCeEEEEEEEecC---CCCcEEEEEEEEcCCC-EEE
Confidence 543211 110 012 2457899999999999999999 5699999765432 3567888889999886 556
Q ss_pred EEEEecC--CCCeEEEEEeeeeEEEEecCCCCCCCceeEEEeCCCCcce------eeecCCCChHHHHHHHHHHHHHhhc
Q 018445 243 VMVVSSR--SPKIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGADGQSK------SMFYPFSGVTEELKAFIHDISEAKK 314 (355)
Q Consensus 243 ~~~~~~~--~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~f~~~i~~~~~ 314 (355)
..++... ....+++|+|++|++.++.... +......+... ......++|..++++|+++|+++.
T Consensus 212 ~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~i~~g~- 283 (319)
T 1tlt_A 212 TTCMHRRAGSQRETVQAVTDGALIDITDMRE-------WREERGQGVVHKPIPGWQSTLEQRGFVGCARHFIECVQNQT- 283 (319)
T ss_dssp EEEEESSSSCCCEEEEEEETTEEEEEETTTE-------EEEESSSCEEECCCCTTCCHHHHTTHHHHHHHHHHHHHHTC-
T ss_pred EEEEeccCCCCcEEEEEEECCCEEEEecCce-------EEEecCCceecccCCCCccccccccHHHHHHHHHHHHhcCC-
Confidence 6665543 3457899999999999986532 22221111100 000112578999999999999997
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHchhcCCcE
Q 018445 315 GINHVPEPRSSFLEGARDVALLEAMLESGSKQGAL 349 (355)
Q Consensus 315 ~~~~~~~~~~~~~d~~~~~~i~~a~~~S~~~~g~~ 349 (355)
.+.++++|++.++++++++++| +++|+.
T Consensus 284 ------~~~~~~~~~~~~~~i~~a~~~S-a~~g~~ 311 (319)
T 1tlt_A 284 ------VPQTAGEQAVLAQRIVDKIWRD-AMSEEG 311 (319)
T ss_dssp ------CCTTSGGGGSHHHHHHHHHHHH-HTC---
T ss_pred ------CCCCCHHHHHHHHHHHHHHHHH-hhcCCC
Confidence 7889999999999999999999 578765
No 46
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=100.00 E-value=2.5e-47 Score=344.22 Aligned_cols=285 Identities=15% Similarity=0.155 Sum_probs=233.6
Q ss_pred CceEEEEec-ccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhh--------cCC
Q 018445 2 APRIAILGA-GIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQII--------KED 72 (355)
Q Consensus 2 ~~rigiiG~-G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell--------~~~ 72 (355)
.+||||||+ |.++.. |++++.+. + ++|+++||+++++++ ++ +.+++.. .| +|+++|+ +++
T Consensus 3 mirvgiIG~gG~i~~~-h~~~l~~~-~-~~lvav~d~~~~~~~-~~----~~~~~~~-~~--~~~~~ll~~~~~l~~~~~ 71 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPR-HLKAIKEV-G-GVLVASLDPATNVGL-VD----SFFPEAE-FF--TEPEAFEAYLEDLRDRGE 71 (312)
T ss_dssp CCEEEEECTTSSSHHH-HHHHHHHT-T-CEEEEEECSSCCCGG-GG----GTCTTCE-EE--SCHHHHHHHHHHHHHTTC
T ss_pred ceEEEEECCChHHHHH-HHHHHHhC-C-CEEEEEEcCCHHHHH-HH----hhCCCCc-ee--CCHHHHHHHhhhhcccCC
Confidence 379999999 678975 99999986 4 799999999998842 22 3444543 33 8999999 789
Q ss_pred CccEEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHH
Q 018445 73 SILGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLI 152 (355)
Q Consensus 73 ~~D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i 152 (355)
++|+|+|+||+..|++++++||++||||+||||++.|++|+++|++++++ +|+.+++++++||+|.++++|++|
T Consensus 72 ~vD~V~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~------~g~~~~v~~~~R~~p~~~~~k~~i 145 (312)
T 3o9z_A 72 GVDYLSIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEAR------TGRRVYTVLQLRVHPSLLALKERL 145 (312)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSCHHHHHHHHHHHHH------HCCCEEECCGGGGCHHHHHHHHHH
T ss_pred CCcEEEECCCchhhHHHHHHHHHCCCeEEEECCCCCCHHHHHHHHHHHHH------cCCEEEEEeehhcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 599999999999999999999999
Q ss_pred HHhCCeeEEEEEEeeccCCCCCccCcccccc--ccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCceEEE
Q 018445 153 AEIGDMMSVQVIVEGSMNSSNPYFSSSWRRN--FTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISS 230 (355)
Q Consensus 153 ~~iG~i~~v~~~~~~~~~~~~~~~~~~w~~~--~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~ 230 (355)
++-|+|+.+++.+..+.. +++..+|+.+ .+||.++|+|+|.+|+++|++| .|.+|++.. ..+|.+.+
T Consensus 146 ~~gG~i~~v~~~~~~~~~---~~~~~~w~~~~~~~gG~l~d~g~H~id~~~~l~G-~~~~v~~~~-------~~~d~~~~ 214 (312)
T 3o9z_A 146 GQEKGAKDVVLTYVTGRG---KWYGKSWKVDEAKSGGLATNIGIHFFDLLAWLFG-RALHVEVHA-------RTPTVNAG 214 (312)
T ss_dssp HTCCSCEEEEEEEEECCC---TTGGGSGGGCHHHHCCHHHHTTHHHHHHHHHHHC-CEEEEEEEE-------ECSSEEEE
T ss_pred HcCCCEEEEEEEEEccCC---CccccccccCcccCCCeeeecccCHHHHHHHHhC-CCeEEEEEe-------cCCceEEE
Confidence 976899999998764322 2234578876 7899999999999999999999 799998864 26789999
Q ss_pred EEEecCCcEEEEEEEEecCCCCeEEEEEeeeeEEEEecCCCCCCCceeEEEeCCCCcceeeecCCCChHHHHHHHHHHHH
Q 018445 231 NFQLENGCSGVFVMVVSSRSPKIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGADGQSKSMFYPFSGVTEELKAFIHDIS 310 (355)
Q Consensus 231 ~l~~~~G~~~~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~ 310 (355)
+++|+||....+ .+... ....+++|+|++|++....... .... -..+|......+++.|.
T Consensus 215 ~l~~~~g~v~~~-~s~~~-~~~~~~~v~G~~G~~~~~~~d~-----qe~~-------------l~~g~~~~h~~~~~~i~ 274 (312)
T 3o9z_A 215 YLELEGARVRWF-LSIDP-SFVPEPLRRQGKRTYRSIAVDG-----EEVE-------------FSEGFTDLHTEVYRKTL 274 (312)
T ss_dssp EEEETTEEEEEE-EESCG-GGSCHHHHTTTCCEEEEEEETT-----EEEE-------------CCTTTTSCHHHHHHHHH
T ss_pred EEEECCCcEEEE-EEecC-CCCCeEEEEecCcEEEEEeecc-----cHHH-------------HhcCChhhhHHHHHHHH
Confidence 999999976444 55433 3346789999999998764332 0011 12456666778888888
Q ss_pred HhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHch
Q 018445 311 EAKKGINHVPEPRSSFLEGARDVALLEAMLESG 343 (355)
Q Consensus 311 ~~~~~~~~~~~~~~~~~d~~~~~~i~~a~~~S~ 343 (355)
.+. ..+++|+..+++++++++.|.
T Consensus 275 ~g~---------~~g~~~~~~~~~~~~~ir~~~ 298 (312)
T 3o9z_A 275 AGE---------GFGLDEAAEAIRVAALLRTLP 298 (312)
T ss_dssp TTC---------CEEHHHHHHHHHHHHHHTTCC
T ss_pred cCC---------CCChHHhHHHHHHHHHHhcCC
Confidence 774 238999999999999999884
No 47
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=100.00 E-value=4.7e-40 Score=294.32 Aligned_cols=280 Identities=13% Similarity=0.079 Sum_probs=211.9
Q ss_pred CceEEEEecccccchhccchhhh---cCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEE
Q 018445 2 APRIAILGAGIFVKTQYIPRLAE---ISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVA 78 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~---~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~ 78 (355)
++||||||+|.+|.. |++.+.. .++ ++|+++||++.. ++ ++ +++ + +|++||++++++|+|+
T Consensus 7 ~~rvgiIG~G~iG~~-~~~~l~~~~~~~~-~~lvav~d~~~~-----a~---~~--g~~--~--~~~~ell~~~~vD~V~ 70 (294)
T 1lc0_A 7 KFGVVVVGVGRAGSV-RLRDLKDPRSAAF-LNLIGFVSRREL-----GS---LD--EVR--Q--ISLEDALRSQEIDVAY 70 (294)
T ss_dssp SEEEEEECCSHHHHH-HHHHHTSHHHHTT-EEEEEEECSSCC-----CE---ET--TEE--B--CCHHHHHHCSSEEEEE
T ss_pred cceEEEEEEcHHHHH-HHHHHhccccCCC-EEEEEEECchHH-----HH---Hc--CCC--C--CCHHHHhcCCCCCEEE
Confidence 479999999999986 8998876 455 999999998742 11 22 443 3 7999999999999999
Q ss_pred EecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHHhCCe
Q 018445 79 VVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAEIGDM 158 (355)
Q Consensus 79 I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~iG~i 158 (355)
|+||+..|++++++||++||||+||||++.+++|+++|++++++ +|+.+++++++||.|.++++|++|.+ |.|
T Consensus 71 i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~------~g~~~~~~~~~r~~p~~~~~~~~i~~-g~i 143 (294)
T 1lc0_A 71 ICSESSSHEDYIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQ------KGRVLHEEHVELLMEEFEFLRREVLG-KEL 143 (294)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHH------TTCCEEEECGGGGSHHHHHHHHHHTT-CCE
T ss_pred EeCCcHhHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHH------hCCEEEEEEhHhccHHHHHHHHHHhc-CCe
Confidence 99999999999999999999999999999999999999999999 59999999999999999999999987 776
Q ss_pred eEEEEEEeeccCCCCCccCccccccccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCceEEEEEEecCCc
Q 018445 159 MSVQVIVEGSMNSSNPYFSSSWRRNFTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISSNFQLENGC 238 (355)
Q Consensus 159 ~~v~~~~~~~~~~~~~~~~~~w~~~~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~G~ 238 (355)
...++.+... .. ...|.. .....|+|.+|++++++| +|..|++...... ....|.+.+.+.+.+|.
T Consensus 144 ~~g~~~~~~~--~~----~~~~~~-----~~~~~Gi~~l~~~~~l~G-~~~~v~a~~~~~~--~~~~~~~~~~~~~~~~~ 209 (294)
T 1lc0_A 144 LKGSLRFTAS--PL----EEERFG-----FPAFSGISRLTWLVSLFG-ELSLISATLEERK--EDQYMKMTVQLETQNKG 209 (294)
T ss_dssp EEEEEEEEES--CC----CHHHHC-----CHHHHTHHHHHHHHHHHC-SCEEEEEEEEEEG--GGTEEEEEEEEECTTSC
T ss_pred eEEEEEEecC--CC----Chhhcc-----ChhhcCccHHHHHHHhcC-CceEEEEEEeecC--ccccccEEEEEECCCCc
Confidence 4444443211 11 112211 112357999999999999 6888888764322 22457889999999998
Q ss_pred EEEEEEEEecC-CCCeEEEEEeeeeEEEEecCCCCCCCceeEEEeCCCCcceeeecCCCChHHH-HHHHHHHHHHhhcCC
Q 018445 239 SGVFVMVVSSR-SPKIFWRVVGMKGTLQVERGNQDGRHGYLVTQYGADGQSKSMFYPFSGVTEE-LKAFIHDISEAKKGI 316 (355)
Q Consensus 239 ~~~~~~~~~~~-~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~f~~~i~~~~~~~ 316 (355)
.+.+..+.... ....++++.|++|.+..... ....+++..+ +++|++.|+++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----------------------~~~~~~~~~~~~~~F~~~i~~~~--- 264 (294)
T 1lc0_A 210 LLSWIEEKGPGLKRNRYVNFQFTSGSLEEVPS----------------------VGVNKNIFLKDQDIFVQKLLDQV--- 264 (294)
T ss_dssp EEEEEEEECTTCCCEEEEEEEESSCEECCCCC----------------------CSCCTTHHHHHHHHHHHHHTTCS---
T ss_pred eEEEEeccccccCCCcEEEEEecCCeeEEcCC----------------------CCCcCceehHhHHHHHHHHccCC---
Confidence 87765443221 12367888888886532100 0122456666 799999999875
Q ss_pred CCCCCCCCCHHH--HHHHHHHHHHHHHchhcCC
Q 018445 317 NHVPEPRSSFLE--GARDVALLEAMLESGSKQG 347 (355)
Q Consensus 317 ~~~~~~~~~~~d--~~~~~~i~~a~~~S~~~~g 347 (355)
+.+.++.++ +++++++++++.+|+ +++
T Consensus 265 ---~~~~~~~~~~~~~~~l~~~~ai~~s~-~~~ 293 (294)
T 1lc0_A 265 ---SAEDLAAEKKRIMHCLGLASDIQKLC-HQK 293 (294)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred ---CchhcChHHhhhhHHHHHHHHHHHHh-hcC
Confidence 234567878 999999999999994 553
No 48
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=100.00 E-value=2.9e-31 Score=243.21 Aligned_cols=220 Identities=14% Similarity=0.106 Sum_probs=162.0
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
++||||||+| +|+. |++++.+.+++++|+||||+++++++++++ ++ +++ .| +|+++|+++ +|+|+|+|
T Consensus 7 ~~rv~VvG~G-~g~~-h~~a~~~~~~~~elvav~~~~~~~a~~~a~---~~--gv~-~~--~~~~~l~~~--~D~v~i~~ 74 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEM-YLNAFMQPPEGLELVGLLAQGSARSRELAH---AF--GIP-LY--TSPEQITGM--PDIACIVV 74 (372)
T ss_dssp CEEEEEECST-TTHH-HHHTTSSCCTTEEEEEEECCSSHHHHHHHH---HT--TCC-EE--SSGGGCCSC--CSEEEECC
T ss_pred CCEEEEEehH-HHHH-HHHHHHhCCCCeEEEEEECCCHHHHHHHHH---Hh--CCC-EE--CCHHHHhcC--CCEEEEEC
Confidence 5899999999 6875 999999887669999999999999999987 45 665 34 899999985 99999999
Q ss_pred CCccc----HHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH---
Q 018445 82 AGQAQ----VDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--- 154 (355)
Q Consensus 82 p~~~H----~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--- 154 (355)
|+..| ++++++||++|||||||||+ +++|+++|+++|++ +|+.++||+++||.|.++++.+..+.
T Consensus 75 p~~~h~~~~~~~a~~al~aGkhVl~EKPl--~~~ea~~l~~~A~~------~g~~~~v~~~yr~~p~vr~~i~~~~~l~~ 146 (372)
T 4gmf_A 75 RSTVAGGAGTQLARHFLARGVHVIQEHPL--HPDDISSLQTLAQE------QGCCYWINTFYPHTRAGRTWLRDAQQLRR 146 (372)
T ss_dssp C--CTTSHHHHHHHHHHHTTCEEEEESCC--CHHHHHHHHHHHHH------HTCCEEEECSGGGSHHHHHHHHHHHHHHH
T ss_pred CCcccchhHHHHHHHHHHcCCcEEEecCC--CHHHHHHHHHHHHH------cCCEEEEcCcccCCHHHHHHHHHHHHHHh
Confidence 99999 99999999999999999997 78999999999999 59999999999999999887665542
Q ss_pred --hCCeeEEEEEEeeccCCCCCccCccccccccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCceEEEEE
Q 018445 155 --IGDMMSVQVIVEGSMNSSNPYFSSSWRRNFTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISSNF 232 (355)
Q Consensus 155 --iG~i~~v~~~~~~~~~~~~~~~~~~w~~~~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~l 232 (355)
.+++..+++.+. .+...+.+|++...+|.....+.+..... ..+.-.+..
T Consensus 147 ~~~~~~~~i~~~~s-----------------------~q~~y~~~dil~~alg~~~~~~~~~~~~~-----~~~~~~l~~ 198 (372)
T 4gmf_A 147 CLAKTPPVVHATTS-----------------------RQLLYSTLDLLLLALGVDTAAVECDVVGS-----FSDFHCLRL 198 (372)
T ss_dssp HHTSCCSEEEEEEC-----------------------TTTHHHHHHHHHHHHTCCGGGCEEEEEEE-----CSSEEEEEE
T ss_pred hccCCceEEEEEec-----------------------cccccchHHHHHHhcCCCcccccccccCC-----CCCeeEEEE
Confidence 578888887642 12345777888888775332222222111 112233344
Q ss_pred EecCCcEEEEEEE-EecCCC-------CeEEEEEeeeeEEEEecCC
Q 018445 233 QLENGCSGVFVMV-VSSRSP-------KIFWRVVGMKGTLQVERGN 270 (355)
Q Consensus 233 ~~~~G~~~~~~~~-~~~~~~-------~~~~~i~G~~G~i~~~~~~ 270 (355)
.. ++..+.+... +..+.. ..++++.++.|++.+....
T Consensus 199 ~~-~~vp~~l~v~n~l~p~dpD~~~~l~hri~l~~~~G~L~L~~t~ 243 (372)
T 4gmf_A 199 FW-PEGEACLLLQRYLDPDDPDMHSLIMHRLLLGWPEGHLSLEASY 243 (372)
T ss_dssp EE-TTEEEEEEEECEECTTSTTCCCSCSEEEEEEETTEEEEECSTT
T ss_pred Ee-CCeeEEEEEeceecCCCCCccceEEEEEEEEcCCEEEEeecCC
Confidence 44 3344444332 222211 1477888888888776643
No 49
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=99.93 E-value=8.6e-29 Score=221.98 Aligned_cols=138 Identities=14% Similarity=0.108 Sum_probs=117.7
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
++||||||+|.+|.. |++.+.++++ ++|+++||+++++++. + ++. + .+++++++.+++|+|+|||
T Consensus 9 ~irv~IIG~G~iG~~-~~~~l~~~~~-~elvav~d~~~~~~~~-------~--g~~--~--~~~~~l~~~~~~DvViiat 73 (304)
T 3bio_A 9 KIRAAIVGYGNIGRY-ALQALREAPD-FEIAGIVRRNPAEVPF-------E--LQP--F--RVVSDIEQLESVDVALVCS 73 (304)
T ss_dssp CEEEEEECCSHHHHH-HHHHHHHCTT-EEEEEEECC--------------C--CTT--S--CEESSGGGSSSCCEEEECS
T ss_pred CCEEEEECChHHHHH-HHHHHhcCCC-CEEEEEEcCCHHHHHH-------c--CCC--c--CCHHHHHhCCCCCEEEECC
Confidence 489999999999986 8999998876 9999999999987653 1 443 2 6677777777899999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEecCC-CCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH--hCCe
Q 018445 82 AGQAQVDTSLKLLKAGKHVIQEKPA-AANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--IGDM 158 (355)
Q Consensus 82 p~~~H~~~~~~al~~GkhVl~EKP~-a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--iG~i 158 (355)
|+..|.+++.+|+++||||+||||+ +.+.+++++|.+++++. |+.+++++ ||.|.++.++++|.+ +|++
T Consensus 74 p~~~h~~~~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~------g~~~~v~~--~~~p~~~~~~~~i~~g~lG~~ 145 (304)
T 3bio_A 74 PSREVERTALEILKKGICTADSFDIHDGILALRRSLGDAAGKS------GAAAVIAS--GWDPGSDSVVRTLMQAIVPKG 145 (304)
T ss_dssp CHHHHHHHHHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHH------TCEEECSC--BBTTBHHHHHHHHHHHHSCEE
T ss_pred CchhhHHHHHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhC------CCEEEEeC--CCCHHHHHHHHHHHCCCCCCc
Confidence 9999999999999999999999997 89999999999999994 88999997 999999999999997 9999
Q ss_pred eEEE
Q 018445 159 MSVQ 162 (355)
Q Consensus 159 ~~v~ 162 (355)
..+.
T Consensus 146 ~~~~ 149 (304)
T 3bio_A 146 ITYT 149 (304)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8654
No 50
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=99.87 E-value=4.6e-23 Score=191.35 Aligned_cols=144 Identities=12% Similarity=0.098 Sum_probs=120.5
Q ss_pred CceEEEEecccccchhccchhhh--------cCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCC
Q 018445 2 APRIAILGAGIFVKTQYIPRLAE--------ISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDS 73 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~--------~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~ 73 (355)
++||||||+|.+|.. ++..|.+ .+.+++|++|||+++++++.+.. +.. . ++|+++|+++++
T Consensus 10 ~irIgIIG~G~VG~~-~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~-------~~~-~--~~d~~ell~d~d 78 (444)
T 3mtj_A 10 PIHVGLLGLGTVGGG-TLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAG-------GLP-L--TTNPFDVVDDPE 78 (444)
T ss_dssp CEEEEEECCHHHHHH-HHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHT-------TCC-E--ESCTHHHHTCTT
T ss_pred cccEEEECCCHHHHH-HHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcc-------cCc-c--cCCHHHHhcCCC
Confidence 479999999999986 6665543 12349999999999998776521 322 2 389999999999
Q ss_pred ccEEEEecCC-cccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeE-EEEecccCchHHHHHHHH
Q 018445 74 ILGVAVVLAG-QAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIW-AVAENYRFEPAFVECKKL 151 (355)
Q Consensus 74 ~D~V~I~tp~-~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~-~v~~~~r~~p~~~~~k~~ 151 (355)
+|+|+++||+ ..|++++++||++||||+|||| +.+.+++++|.++|++. |+.+ +.+...++.|.++.++++
T Consensus 79 iDvVve~tp~~~~h~~~~~~AL~aGKhVvtenk-al~a~~~~eL~~~A~~~------gv~l~~Ea~V~~giPii~~Lrel 151 (444)
T 3mtj_A 79 IDIVVELIGGLEPARELVMQAIANGKHVVTANK-HLVAKYGNEIFAAAQAK------GVMVTFEAAVAGGIPIIKALREG 151 (444)
T ss_dssp CCEEEECCCSSTTHHHHHHHHHHTTCEEEECCH-HHHHHHHHHHHHHHHHH------TCCEECGGGSSTTSCHHHHHHTT
T ss_pred CCEEEEcCCCchHHHHHHHHHHHcCCEEEECCc-ccCHHHHHHHHHHHHHh------CCeEEEEEeeeCChHHHHHHHHH
Confidence 9999999997 8999999999999999999999 88999999999999994 8777 568899999999999999
Q ss_pred HHHhCCeeEEEEE
Q 018445 152 IAEIGDMMSVQVI 164 (355)
Q Consensus 152 i~~iG~i~~v~~~ 164 (355)
+.. |+|..+...
T Consensus 152 L~~-~~Ig~I~GI 163 (444)
T 3mtj_A 152 LTA-NRIEWLAGI 163 (444)
T ss_dssp TTT-SCEEEEEEE
T ss_pred HhC-CCCceEEEE
Confidence 976 555555544
No 51
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=99.84 E-value=4.9e-21 Score=176.97 Aligned_cols=149 Identities=15% Similarity=0.164 Sum_probs=116.4
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHH-h-hh---------------cCCccccccCcc
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVA-R-KH---------------FADVECVWGDNG 64 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~-~-~~---------------~~~~~~~~~~~~ 64 (355)
++||||||+|.||+. |+..+.+.++ ++|++|||+++++++.++++. . +. ..+.... |+|
T Consensus 23 ~IRVGIIGaG~iG~~-~~~~l~~~~~-veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v--~~D 98 (446)
T 3upl_A 23 PIRIGLIGAGEMGTD-IVTQVARMQG-IEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAV--TDD 98 (446)
T ss_dssp CEEEEEECCSHHHHH-HHHHHTTSSS-EEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEE--ESC
T ss_pred ceEEEEECChHHHHH-HHHHHhhCCC-cEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceE--ECC
Confidence 689999999999986 8888888776 999999999999999887632 1 00 0011223 389
Q ss_pred hhhhhcCCCccEEEEecCC-cccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCch
Q 018445 65 LEQIIKEDSILGVAVVLAG-QAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEP 143 (355)
Q Consensus 65 ~~ell~~~~~D~V~I~tp~-~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p 143 (355)
+++|++++++|+|+|+||+ ..|++++++||++||||+|+++ ..+..++.+|.++|++ +|++++++..-+..
T Consensus 99 ~eeLL~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~~nk-~l~~~eg~eL~~~A~e------~Gvvl~~~~gdqp~- 170 (446)
T 3upl_A 99 NDLILSNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVMMNV-EADVTIGPYLKAQADK------QGVIYSLGAGDEPS- 170 (446)
T ss_dssp HHHHHTCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEECCH-HHHHHHHHHHHHHHHH------HTCCEEECTTSHHH-
T ss_pred HHHHhcCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEecCc-ccCHHHHHHHHHHHHH------hCCeeeecCCcchH-
Confidence 9999999999999999987 4799999999999999999665 4678899999999999 49999888754433
Q ss_pred HHHHHHHHHHH--hCCeeEEEEEE
Q 018445 144 AFVECKKLIAE--IGDMMSVQVIV 165 (355)
Q Consensus 144 ~~~~~k~~i~~--iG~i~~v~~~~ 165 (355)
.+.++++. ++.+.-+.+-.
T Consensus 171 ---~~~eLv~~a~~~G~~~v~~Gk 191 (446)
T 3upl_A 171 ---SCMELIEFVSALGYEVVSAGK 191 (446)
T ss_dssp ---HHHHHHHHHHHTTCEEEEEEE
T ss_pred ---HHHHHHHHHHhCCCeEEEecc
Confidence 24455553 46666666553
No 52
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=99.82 E-value=2.1e-21 Score=174.35 Aligned_cols=148 Identities=18% Similarity=0.163 Sum_probs=117.0
Q ss_pred ceEEEEecccccchhccchhhhc--------CCeEEEEEEEeCCHHHHHH------HHHHHhhhcCCccccccCcchhhh
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEI--------SDLVSLKFIWSRSEESAKS------AAEVARKHFADVECVWGDNGLEQI 68 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~--------~~~~~vvai~d~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~el 68 (355)
+||||||+|.+|.. |++.|.++ ++ ++|++|||+++.+.+. +.. ++ .....|...|++++
T Consensus 3 irvgIiG~G~VG~~-~~~~l~~~~~~l~~~g~~-~~lvaV~d~~~~~~~~id~~~~~~~---~~--~~~~~~~~~d~~~l 75 (327)
T 3do5_A 3 IKIAIVGFGTVGQG-VAELLIRKREEIEKAIGE-FKVTAVADSKSSISGDFSLVEALRM---KR--ETGMLRDDAKAIEV 75 (327)
T ss_dssp EEEEEECCSHHHHH-HHHHHHHTHHHHHHHHCC-EEEEEEECSSCEEESSCCHHHHHHH---HH--HHSSCSBCCCHHHH
T ss_pred EEEEEEeccHHHHH-HHHHHHhhHHHHHhcCCC-EEEEEEEeCChHhccccCHHHHHhh---hc--cCccccCCCCHHHH
Confidence 79999999999986 89988876 55 9999999998765322 222 11 11112201399999
Q ss_pred hcCCCccEEEEecCCccc----HHHHHHHHHcCCeEEEe--cCCCCCHHHHHHHHHHhhccCCCCCCCCeE-EEEecccC
Q 018445 69 IKEDSILGVAVVLAGQAQ----VDTSLKLLKAGKHVIQE--KPAAANISEIENALSRYNSICPDPPGQPIW-AVAENYRF 141 (355)
Q Consensus 69 l~~~~~D~V~I~tp~~~H----~~~~~~al~~GkhVl~E--KP~a~~~~e~~~l~~~a~~~~~~~~~~~~~-~v~~~~r~ 141 (355)
++++++|+|+++||+..| ++++++||++||||+|| ||++ .+.++|.++|++ +|+.+ +.+...++
T Consensus 76 l~~~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~NKkpla---~~~~eL~~~A~~------~g~~~~~ea~v~~g 146 (327)
T 3do5_A 76 VRSADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTSNKGPLV---AEFHGLMSLAER------NGVRLMYEATVGGA 146 (327)
T ss_dssp HHHSCCSEEEECCCCC----CHHHHHHHHHTTTCEEEECCSHHHH---HHHHHHHHHHHH------TTCCEECGGGSSTT
T ss_pred hcCCCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEecCchhhH---HHHHHHHHHHHh------hCCcEEEEEEeeec
Confidence 999999999999999999 99999999999999999 9998 478899999999 47754 56888999
Q ss_pred chHHHHHHHHHHHhCCeeEEEEEEee
Q 018445 142 EPAFVECKKLIAEIGDMMSVQVIVEG 167 (355)
Q Consensus 142 ~p~~~~~k~~i~~iG~i~~v~~~~~~ 167 (355)
.|.++.+++++.. |+|..+...+.+
T Consensus 147 ~Pii~~l~~~l~~-~~I~~I~GIlnG 171 (327)
T 3do5_A 147 MPVVKLAKRYLAL-CEIESVKGIFNG 171 (327)
T ss_dssp SCCHHHHHTTTTT-SCEEEEEEECCH
T ss_pred CHHHHHHHHHhhC-CCccEEEEEECC
Confidence 9999999999875 677777766543
No 53
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=99.81 E-value=3.4e-20 Score=167.31 Aligned_cols=129 Identities=13% Similarity=0.140 Sum_probs=111.2
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
++||||||+|+||+. |++.+.+.++ ++++++||+++++ .+. + ++. .+ +|+++++ .++|+|+++|
T Consensus 3 ~irV~IiG~G~mG~~-~~~~l~~~~~-~elvav~d~~~~~--~~~-----~--gv~-~~--~d~~~ll--~~~DvViiat 66 (320)
T 1f06_A 3 NIRVAIVGYGNLGRS-VEKLIAKQPD-MDLVGIFSRRATL--DTK-----T--PVF-DV--ADVDKHA--DDVDVLFLCM 66 (320)
T ss_dssp CEEEEEECCSHHHHH-HHHHHTTCSS-EEEEEEEESSSCC--SSS-----S--CEE-EG--GGGGGTT--TTCSEEEECS
T ss_pred CCEEEEEeecHHHHH-HHHHHhcCCC-CEEEEEEcCCHHH--hhc-----C--CCc-ee--CCHHHHh--cCCCEEEEcC
Confidence 579999999999986 8999988776 9999999999766 211 1 443 22 8899998 5699999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEecCCCCCHHHH-HHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH
Q 018445 82 AGQAQVDTSLKLLKAGKHVIQEKPAAANISEI-ENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE 154 (355)
Q Consensus 82 p~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~-~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~ 154 (355)
|+..|.+.+.+++++||||+||||++.+.+++ ++|.+++++ +..+.+.++ ||.|.+..+++++.+
T Consensus 67 p~~~h~~~~~~al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~-------~~~v~v~~~-~~~p~~~~l~~~l~~ 132 (320)
T 1f06_A 67 GSATDIPEQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATA-------AGNVALVST-GWDPGMFSINRVYAA 132 (320)
T ss_dssp CTTTHHHHHHHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHH-------HTCEEECSC-SBTTBHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHCCCEEEECCCCcCCHHHHHHHHHHHHHh-------CCCEEEEec-CChHHHHHHHHHHhh
Confidence 99999999999999999999999999999999 999999987 344666677 999999999999986
No 54
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=99.78 E-value=1.6e-18 Score=153.84 Aligned_cols=213 Identities=12% Similarity=0.138 Sum_probs=163.2
Q ss_pred CC-ceEEEEe-cccccchhccchhhhcCCeEEEEEE-EeCCHHHHHHHHHHHhhhcCCccccc--------------cCc
Q 018445 1 MA-PRIAILG-AGIFVKTQYIPRLAEISDLVSLKFI-WSRSEESAKSAAEVARKHFADVECVW--------------GDN 63 (355)
Q Consensus 1 m~-~rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai-~d~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~ 63 (355)
|+ .||+|+| +|.||.. ++..+.++ ++++|+|+ |+++.+++.+.++ ++.|...... +.+
T Consensus 1 M~~k~i~ILGsTGSIG~~-tldVi~~~-~~~~vvaL~a~~n~~~l~~q~~---~f~p~~v~v~~~~~~~~~l~~~~~G~~ 75 (376)
T 3a06_A 1 MEERTLVILGATGSIGTQ-TLDVLKKV-KGIRLIGISFHSNLELAFKIVK---EFNVKNVAITGDVEFEDSSINVWKGSH 75 (376)
T ss_dssp --CEEEEEETTTSHHHHH-HHHHHHHS-CSEEEEEEEESSCHHHHHHHHH---HHTCCEEEECSSCCCCCSSSEEEESTT
T ss_pred CCcceEEEECCCCHHHHH-HHHHHHhC-CCeEEEEEEccCCHHHHHHHHH---HcCCCEEEEccHHHHHHHHHHHccCHH
Confidence 65 4899999 7999986 99999988 55999998 8999999888776 4544433211 112
Q ss_pred chhhhhcCCCccEEEEecCCcccHHHHHHHHHcCCeEEE-ecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCc
Q 018445 64 GLEQIIKEDSILGVAVVLAGQAQVDTSLKLLKAGKHVIQ-EKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFE 142 (355)
Q Consensus 64 ~~~ell~~~~~D~V~I~tp~~~H~~~~~~al~~GkhVl~-EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~ 142 (355)
.+.++++.+++|+|+++++...|...+.+|+++||||.+ +| ...+.....++++++++ |+.+++... +++
T Consensus 76 ~l~el~~~~~~D~Vv~AivG~aGL~ptlaAi~aGK~vaLANK--EsLV~aG~li~~~a~~~------g~~llPVDS-EHs 146 (376)
T 3a06_A 76 SIEEMLEALKPDITMVAVSGFSGLRAVLASLEHSKRVCLANK--ESLVCGGFLVKKKLKEK------GTELIPVDS-EHS 146 (376)
T ss_dssp HHHHHHHHHCCSEEEECCCSTTHHHHHHHHHHHCSEEEECCS--HHHHHHHHHHHHHHHHH------CCEEEECSH-HHH
T ss_pred HHHHHhcCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEeCh--HHHHhhHHHHHHHHHHc------CCEEEEEcc-ccC
Confidence 337888888899999999999999999999999999999 99 56667778888999994 888988888 999
Q ss_pred hHHHHHHHHHHHhCCeeEEEEEEee-ccCCCC--------C---ccCcccccc----ccCccccchhhHHHHHHHHHhCC
Q 018445 143 PAFVECKKLIAEIGDMMSVQVIVEG-SMNSSN--------P---YFSSSWRRN----FTGGFILDMGVHFIAGLRMITGC 206 (355)
Q Consensus 143 p~~~~~k~~i~~iG~i~~v~~~~~~-~~~~~~--------~---~~~~~w~~~----~~gg~l~d~g~H~id~~~~l~G~ 206 (355)
+.+|.++ ++|..+..+-++ |+..+. + -..++|.-. .++..|++.|.|.|+ ..||||.
T Consensus 147 AifQ~L~------~~v~kiiLTASGGpFr~~~~~~l~~vt~~~Al~HPnW~MG~KITiDSATmmNKGlEvIE-A~wLF~~ 219 (376)
T 3a06_A 147 AIFQVME------PEVEKVVLTASGGALRDWKISKIDRARPEDVLKHPVWNMGARITVDSATMVNKAFEVLE-AMELFEL 219 (376)
T ss_dssp HHHHHCC------SSCSEEEEEECCCTTSSSCHHHHTTCCGGGTCCCSSCCCCHHHHHHHHHTHHHHHHHHH-HHHHHTC
T ss_pred HHHHHHH------hhhceEEEeccCCcccCCCHHHHhhCCHHHhccCCCCCCCCeEEecHHHHHHHHHHHHH-HHHHcCC
Confidence 9999988 345444444333 222211 0 012467642 356789999999999 8999998
Q ss_pred cceeEEEeecccCCCCCCCceEEEEEEecCCcEEE
Q 018445 207 EVVSVSAITSHIDKTLPPPDNISSNFQLENGCSGV 241 (355)
Q Consensus 207 ~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~G~~~~ 241 (355)
++++|....+ ..+..+.+++|.||.+..
T Consensus 220 ~~~~I~vvvH-------pqSiIHsmVef~DGsv~A 247 (376)
T 3a06_A 220 PFEKIEVKIH-------REGLVHGAVVLPDGNVKM 247 (376)
T ss_dssp CGGGEEEEEC-------TTCCEEEEEECTTSCEEE
T ss_pred ChheEEEEEC-------CCCeEEEEEEEcCCcEEE
Confidence 8898988764 368999999999996543
No 55
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=99.78 E-value=8.2e-20 Score=164.94 Aligned_cols=149 Identities=10% Similarity=0.034 Sum_probs=115.0
Q ss_pred CceEEEEecccccchhccchhhhcC------CeEEEEEEEeCCHHHHHH------HHHHHhhhcCCccccccCc---chh
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEIS------DLVSLKFIWSRSEESAKS------AAEVARKHFADVECVWGDN---GLE 66 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~------~~~~vvai~d~~~~~~~~------~~~~~~~~~~~~~~~~~~~---~~~ 66 (355)
++||||||+|.+|.. |++.|.+.+ .+++|++|||+++++++. +.+.... .++...+ + |++
T Consensus 6 ~irvgIiG~G~VG~~-~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~d~~ 80 (331)
T 3c8m_A 6 TINLSIFGLGNVGLN-LLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEK--GSLDSLE--YESISAS 80 (331)
T ss_dssp EEEEEEECCSHHHHH-HHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHT--TCGGGCC--SEECCHH
T ss_pred EEeEEEEecCHHHHH-HHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhcc--CCccccc--CCCCCHH
Confidence 489999999999986 888887654 148999999999876554 1221101 1332222 5 999
Q ss_pred hhhcCCCccEEEEecCCc----ccHHHHHHHHHcCCeEEE--ecCCCCCHHHHHHHHHHhhccCCCCCCCCeE-EEEecc
Q 018445 67 QIIKEDSILGVAVVLAGQ----AQVDTSLKLLKAGKHVIQ--EKPAAANISEIENALSRYNSICPDPPGQPIW-AVAENY 139 (355)
Q Consensus 67 ell~~~~~D~V~I~tp~~----~H~~~~~~al~~GkhVl~--EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~-~v~~~~ 139 (355)
+|+ ++++|+|++|||+. .|++++++||++||||+| +||+ ..++++|.++|++. |+.+ +-+...
T Consensus 81 ~ll-~~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGkhVvtanK~pl---a~~~~eL~~~A~~~------gv~~~~ea~vg 150 (331)
T 3c8m_A 81 EAL-ARDFDIVVDATPASADGKKELAFYKETFENGKDVVTANKSGL---ANFWPEIMEYARSN------NRRIRYEATVA 150 (331)
T ss_dssp HHH-HSSCSEEEECSCCCSSSHHHHHHHHHHHHTTCEEEECCCHHH---HHHHHHHHHHHHHH------TCCEECGGGSS
T ss_pred HHh-CCCCCEEEECCCCCCccchHHHHHHHHHHCCCeEEecCchhh---HHHHHHHHHHHHHc------CCEEEEEeecc
Confidence 999 89999999999997 899999999999999999 4576 47899999999994 7544 445566
Q ss_pred cCchHHHHHHHHHHHhCCeeEEEEEEe
Q 018445 140 RFEPAFVECKKLIAEIGDMMSVQVIVE 166 (355)
Q Consensus 140 r~~p~~~~~k~~i~~iG~i~~v~~~~~ 166 (355)
++.|.++.+++++.. |+|..+...+.
T Consensus 151 ~giPii~~l~~~l~g-~~I~~I~GI~n 176 (331)
T 3c8m_A 151 GGVPLFSFIDYSVLP-SRIKKFRGIVS 176 (331)
T ss_dssp TTSCCHHHHHHHSTT-CCCCEEEEECC
T ss_pred cccHHHHHHHHHhhc-CcccEEEEEEe
Confidence 777999999999975 66666665543
No 56
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=99.74 E-value=1.5e-18 Score=149.98 Aligned_cols=111 Identities=15% Similarity=0.130 Sum_probs=94.2
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
|||||||+|.||.. |...+.+ ++ ++|+++||+++ +++ . .+ +|++++++ +++|+|+++||
T Consensus 1 m~vgiIG~G~mG~~-~~~~l~~-~g-~~lv~v~d~~~-~~~-----------~---~~--~~~~~l~~-~~~DvVv~~~~ 59 (236)
T 2dc1_A 1 MLVGLIGYGAIGKF-LAEWLER-NG-FEIAAILDVRG-EHE-----------K---MV--RGIDEFLQ-REMDVAVEAAS 59 (236)
T ss_dssp CEEEEECCSHHHHH-HHHHHHH-TT-CEEEEEECSSC-CCT-----------T---EE--SSHHHHTT-SCCSEEEECSC
T ss_pred CEEEEECCCHHHHH-HHHHHhc-CC-CEEEEEEecCc-chh-----------h---hc--CCHHHHhc-CCCCEEEECCC
Confidence 59999999999986 8888874 44 89999999984 321 1 22 89999997 67999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEecCCCCCHHHH-HHHHHHhhccCCCCCCCCeEEEEeccc
Q 018445 83 GQAQVDTSLKLLKAGKHVIQEKPAAANISEI-ENALSRYNSICPDPPGQPIWAVAENYR 140 (355)
Q Consensus 83 ~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~-~~l~~~a~~~~~~~~~~~~~~v~~~~r 140 (355)
+..|.+++..++++||||+||||++.+..++ ++|.+++++. |+.+++..+..
T Consensus 60 ~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~------g~~~~i~~~~~ 112 (236)
T 2dc1_A 60 QQAVKDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKT------GRRVYIASGAI 112 (236)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHH------CCCEEECCTTC
T ss_pred HHHHHHHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhc------CCeEEecCccc
Confidence 9999999999999999999999999999998 8999999984 77776655543
No 57
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=99.73 E-value=5.4e-19 Score=158.68 Aligned_cols=188 Identities=18% Similarity=0.164 Sum_probs=130.3
Q ss_pred CCceEEEEecccccchhccchhhhcCC-------eEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCC
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISD-------LVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDS 73 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~-------~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~ 73 (355)
+++||||||+|.+|.. |+..+.+++. +++|++|||+++++.+. . ..... ++|+++|+ +
T Consensus 2 k~irvgIiG~G~VG~~-~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~-------~--~~~~~--~~d~~~ll---~ 66 (332)
T 2ejw_A 2 EALKIALLGGGTVGSA-FYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRA-------I--PQELL--RAEPFDLL---E 66 (332)
T ss_dssp EEEEEEEECCSHHHHH-HHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCCS-------S--CGGGE--ESSCCCCT---T
T ss_pred CeeEEEEEcCCHHHHH-HHHHHHhChhhHhhcCCCEEEEEEEECCHHHhhc-------c--Ccccc--cCCHHHHh---C
Confidence 1489999999999986 8888877652 48999999999776432 1 12222 38999999 5
Q ss_pred ccEEEEecCCc-ccHHHHHHHHHcCCeEEE--ecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHH
Q 018445 74 ILGVAVVLAGQ-AQVDTSLKLLKAGKHVIQ--EKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKK 150 (355)
Q Consensus 74 ~D~V~I~tp~~-~H~~~~~~al~~GkhVl~--EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~ 150 (355)
+|+|++|||+. .|++++++||++||||+| |||++ +++++|.++|++ + ..++-+....+.|.++.++
T Consensus 67 iDvVve~t~~~~~a~~~~~~AL~aGKhVVtaNkkpla---~~~~eL~~~A~~------~-~~~~Ea~vg~giPii~~l~- 135 (332)
T 2ejw_A 67 ADLVVEAMGGVEAPLRLVLPALEAGIPLITANKALLA---EAWESLRPFAEE------G-LIYHEASVMAGTPALSFLE- 135 (332)
T ss_dssp CSEEEECCCCSHHHHHHHHHHHHTTCCEEECCHHHHH---HSHHHHHHHHHT------T-CEECGGGTTTTSSSHHHHH-
T ss_pred CCEEEECCCCcHHHHHHHHHHHHcCCeEEECCchhHH---HHHHHHHHHHHh------C-CeEEEEEcccCCHHHHHHH-
Confidence 99999999998 468899999999999999 78988 789999999998 4 5566666667779999999
Q ss_pred HHHHhCCeeEEEEEEeeccC-------CCCCccCc-ccccc---ccCccccchhh----HHHHHHHHH-hCC--cceeEE
Q 018445 151 LIAEIGDMMSVQVIVEGSMN-------SSNPYFSS-SWRRN---FTGGFILDMGV----HFIAGLRMI-TGC--EVVSVS 212 (355)
Q Consensus 151 ~i~~iG~i~~v~~~~~~~~~-------~~~~~~~~-~w~~~---~~gg~l~d~g~----H~id~~~~l-~G~--~~~~V~ 212 (355)
.+.. |+|..+...+.+..+ ...++... ..... ...++..|+.- |-+..+-++ +|. ++..|.
T Consensus 136 ~l~~-~~I~~I~gI~nGT~nyil~~m~~g~~f~~~l~eAq~~GyaE~dP~~Dv~G~d~a~Kl~iLa~~~~G~~~~~~~v~ 214 (332)
T 2ejw_A 136 TLRG-SELLELHGILNGTTLYILQEMEKGRTYAEALLEAQRLGYAEADPTLDVEGIDAAHKLTLLARLLVDPGFPFAEVE 214 (332)
T ss_dssp HHTT-SEEEEEEEECCHHHHHHHHHHHTTCCHHHHHHHHHHTTSSCSSCHHHHTTHHHHHHHHHHHHHHTCTTCCGGGCE
T ss_pred HhcC-CCcceEEEEEecccccccCccccCCCHHHHHHHHHHCCCCCCCCccccCchhHHHHHHHHHHHHhCCCCCHHHeE
Confidence 7765 566666554432211 11111000 00000 12345555554 448888888 896 345666
Q ss_pred Eee
Q 018445 213 AIT 215 (355)
Q Consensus 213 a~~ 215 (355)
..+
T Consensus 215 ~eg 217 (332)
T 2ejw_A 215 AQG 217 (332)
T ss_dssp ECC
T ss_pred ecC
Confidence 655
No 58
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=99.73 E-value=3.7e-17 Score=148.09 Aligned_cols=213 Identities=13% Similarity=0.145 Sum_probs=157.0
Q ss_pred ceEEEEec-ccccchhccchhhhcCCeEEEEEE-EeCCHHHHHHHHHHHhhhcCCcc---------------------cc
Q 018445 3 PRIAILGA-GIFVKTQYIPRLAEISDLVSLKFI-WSRSEESAKSAAEVARKHFADVE---------------------CV 59 (355)
Q Consensus 3 ~rigiiG~-G~~~~~~~~~~l~~~~~~~~vvai-~d~~~~~~~~~~~~~~~~~~~~~---------------------~~ 59 (355)
+||+|+|+ |.+|.. ++..+.++++.++++++ ++++.+++.+.++ ++.|... ..
T Consensus 5 ~rI~ILGsTGSIG~~-~l~vi~~~p~~~~v~al~ag~ni~~l~~~~~---~f~~~~v~v~d~~~~~~l~~~l~~~~~~v~ 80 (388)
T 1r0k_A 5 RTVTVLGATGSIGHS-TLDLIERNLDRYQVIALTANRNVKDLADAAK---RTNAKRAVIADPSLYNDLKEALAGSSVEAA 80 (388)
T ss_dssp EEEEEETTTSHHHHH-HHHHHHHTGGGEEEEEEEESSCHHHHHHHHH---HTTCSEEEESCGGGHHHHHHHTTTCSSEEE
T ss_pred eEEEEECCCeEeHHH-HHHHHHhCcCcEEEEEEEcCCCHHHHHHHHH---HcCCcEEEEcChHHHHHHHHHhccCCcEEE
Confidence 58999999 999986 89999998877999999 9999998887766 3322211 11
Q ss_pred ccCcchhhhhcCCCccEEEEecCCcccHHHHHHHHHcCCeEEEe-cCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEec
Q 018445 60 WGDNGLEQIIKEDSILGVAVVLAGQAQVDTSLKLLKAGKHVIQE-KPAAANISEIENALSRYNSICPDPPGQPIWAVAEN 138 (355)
Q Consensus 60 ~~~~~~~ell~~~~~D~V~I~tp~~~H~~~~~~al~~GkhVl~E-KP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~ 138 (355)
++.++++++++++ +|+|+.+++...|...+.+|+++||||.+. |+ ..+.....|.++|+++ |+.+.+.
T Consensus 81 ~g~~~~~el~~~~-iDvVV~ai~G~aGl~ptlaAi~aGK~VvlANKE--~lv~~G~~l~~~A~~~------gv~liPV-- 149 (388)
T 1r0k_A 81 AGADALVEAAMMG-ADWTMAAIIGCAGLKATLAAIRKGKTVALANKE--SLVSAGGLMIDAVREH------GTTLLPV-- 149 (388)
T ss_dssp ESHHHHHHHHTSC-CSEEEECCCSGGGHHHHHHHHHTTSEEEECCSH--HHHTTHHHHHHHHHHH------TCEEEEC--
T ss_pred eCccHHHHHHcCC-CCEEEEeCCCHHHHHHHHHHHHCCCEEEEeCcH--HHHhhHHHHHHHHHHc------CCEEEEe--
Confidence 1224456788888 999999999999999999999999999995 96 4566678889999994 8888554
Q ss_pred ccCchHHHHHHHHHHH--hCCeeEEEEEEeec-cCCCC-Cc----------cCcccccc----ccCccccchhhHHHHHH
Q 018445 139 YRFEPAFVECKKLIAE--IGDMMSVQVIVEGS-MNSSN-PY----------FSSSWRRN----FTGGFILDMGVHFIAGL 200 (355)
Q Consensus 139 ~r~~p~~~~~k~~i~~--iG~i~~v~~~~~~~-~~~~~-~~----------~~~~w~~~----~~gg~l~d~g~H~id~~ 200 (355)
++....+++.+.. +++|..+...-.+. +..+. +. ..++|.-. ..+..+++.|.|.++ .
T Consensus 150 ---Dseh~Ai~q~L~g~~i~~v~~IilTaSGGpfr~~~~~~l~~vt~~~Al~hp~W~mG~KitiDSAtm~NkglevIE-a 225 (388)
T 1r0k_A 150 ---DSEHNAIFQCFPHHNRDYVRRIIITASGGPFRTTSLAEMATVTPERAVQHPNWSMGAKISIDSATMMNKGLELIE-A 225 (388)
T ss_dssp ---SHHHHHHHHHCCTTCGGGEEEEEEEECCCTTTTCCHHHHTTCCHHHHHC------CHHHHHHHHHTHHHHHHHHH-H
T ss_pred ---chhHHHHHHHhhCCCccceeEEEEEeecccccCCCHHHHhcCCHHHhccCCCCCCcchhhhHHHHHHcCcCcccc-c
Confidence 5667778887764 67787777665442 21111 00 01357642 356788999999999 8
Q ss_pred HHHhCCcceeEEEeecccCCCCCCCceEEEEEEecCCcEEE
Q 018445 201 RMITGCEVVSVSAITSHIDKTLPPPDNISSNFQLENGCSGV 241 (355)
Q Consensus 201 ~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~G~~~~ 241 (355)
.||||.++.++....+ .++..+.+++|.||.+..
T Consensus 226 ~~Lf~~~~~~I~vvvh-------pqsiihsmV~f~dGsv~a 259 (388)
T 1r0k_A 226 FHLFQIPLEKFEILVH-------PQSVIHSMVEYLDGSILA 259 (388)
T ss_dssp HHHHCCCGGGEEEEEC-------TTCCEEEEEEETTSCEEE
T ss_pred cccCCCCHHHeeeeec-------hhHeeEEEEEEcCCcEEE
Confidence 8999988888888764 246889999999996543
No 59
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=99.72 E-value=2.5e-18 Score=156.36 Aligned_cols=147 Identities=11% Similarity=0.151 Sum_probs=115.1
Q ss_pred CceEEEEecccccchhccchhhhcC--CeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCC-----Cc
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEIS--DLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKED-----SI 74 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~--~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~-----~~ 74 (355)
++||||||+|.+|.. |++.|.+++ .+++|++|||++... +. ..++++. . +++++++++++ ++
T Consensus 4 ~i~vgIiG~G~VG~~-~~~~l~~~~~g~~~~vvaV~d~~~~~---~~----~~~~gi~-~--~~~~~e~l~~~~~~~~di 72 (358)
T 1ebf_A 4 VVNVAVIGAGVVGSA-FLDQLLAMKSTITYNLVLLAEAERSL---IS----KDFSPLN-V--GSDWKAALAASTTKTLPL 72 (358)
T ss_dssp EEEEEEECCSHHHHH-HHHHHHHCCCSSEEEEEEEECSSBEE---EC----SSCSCCS-C--TTCHHHHHHTCCCBCCCH
T ss_pred eEEEEEEecCHHHHH-HHHHHHhcCCCCCEEEEEEEECChhh---hc----cccCCCC-c--cccHHHHHhcccCCCCCH
Confidence 479999999999986 899998764 248999999975421 11 1222333 1 27888888876 55
Q ss_pred -------------cEEEEecCCcccHHHHHHHHHcCCeEEE--ecCCCCCHHHHHHHHHHhhccCCCCCCCCeEE-EEec
Q 018445 75 -------------LGVAVVLAGQAQVDTSLKLLKAGKHVIQ--EKPAAANISEIENALSRYNSICPDPPGQPIWA-VAEN 138 (355)
Q Consensus 75 -------------D~V~I~tp~~~H~~~~~~al~~GkhVl~--EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~-v~~~ 138 (355)
|+|++|||+..|+....+||++||||+| |||++.+.+++++|. +|++ +|+.+. -+..
T Consensus 73 d~v~e~~~~~~~~DvVV~~t~~~~~a~~~~~AL~aGkhVVtaNkkpla~~~~~~~eL~-~A~~------~gv~~~~Ea~v 145 (358)
T 1ebf_A 73 DDLIAHLKTSPKPVILVDNTSSAYIAGFYTKFVENGISIATPNKKAFSSDLATWKALF-SNKP------TNGFVYHEATV 145 (358)
T ss_dssp HHHHHHHTTCSSCEEEEECSCCHHHHTTHHHHHHTTCEEECCCCGGGSSCHHHHHHHT-CCCT------TCCCEECGGGT
T ss_pred HHHHHHhhhccCCcEEEEcCCChHHHHHHHHHHHCCCeEEecCcccccCCHHHHHHHH-HHHH------cCCEEEEcccc
Confidence 7999999999999999999999999999 999999999999999 9999 475553 3445
Q ss_pred ccCchHHHHHHHHHHHhCCeeEEEEEEe
Q 018445 139 YRFEPAFVECKKLIAEIGDMMSVQVIVE 166 (355)
Q Consensus 139 ~r~~p~~~~~k~~i~~iG~i~~v~~~~~ 166 (355)
..+.|.++.+|+++++-++|..++..+.
T Consensus 146 g~giPii~~l~~~l~~G~~I~~I~GIln 173 (358)
T 1ebf_A 146 GAGLPIISFLREIIQTGDEVEKIEGIFS 173 (358)
T ss_dssp TTTSSCHHHHHHHHHHTCCEEEEEEECC
T ss_pred ccCCcHHHHHHHHHHcCCCeEEEEEEEe
Confidence 5667999999999975357777776543
No 60
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=99.69 E-value=5.3e-17 Score=145.44 Aligned_cols=155 Identities=10% Similarity=-0.016 Sum_probs=115.8
Q ss_pred CCceEEEEecccccchhccchhhhc-----CCeEEEEEEEeCCHHH------HHHHHHHHhhhcCCccccccCcchhhhh
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEI-----SDLVSLKFIWSRSEES------AKSAAEVARKHFADVECVWGDNGLEQII 69 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~-----~~~~~vvai~d~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ell 69 (355)
.++||||||+|.+|.. ++..|.+. +.+++|++|||++++. ...+.+..++.. .+... .+ |+++++
T Consensus 3 k~irVgIiG~G~VG~~-~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g-~~~~~-~~-d~~e~l 78 (325)
T 3ing_A 3 KEIRIILMGTGNVGLN-VLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTG-RISDR-AF-SGPEDL 78 (325)
T ss_dssp CEEEEEEECCSHHHHH-HHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHS-CSCSS-BC-CSGGGG
T ss_pred ceEEEEEEcCcHHHHH-HHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcC-CCCcc-cC-CHHHHh
Confidence 1479999999999986 89888764 2359999999998652 122222111221 12211 12 789999
Q ss_pred cCCCccEEEEecCCccc----HHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCe-EEEEecccCchH
Q 018445 70 KEDSILGVAVVLAGQAQ----VDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPI-WAVAENYRFEPA 144 (355)
Q Consensus 70 ~~~~~D~V~I~tp~~~H----~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~-~~v~~~~r~~p~ 144 (355)
+++++|+|++|||+..| ++++++||++||||+++++. ...++.++|.++|++. |+. ++-+....+.|.
T Consensus 79 ~~~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVtaNK~-~la~~~~eL~~lA~~~------g~~~~~Ea~vg~giPi 151 (325)
T 3ing_A 79 MGEAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTANKS-GLANKWHDIMDSANQN------SKYIRYEATVAGGVPL 151 (325)
T ss_dssp TTSCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEECCCH-HHHHHHHHHHHHHHHH------TCCEECGGGSSTTSCC
T ss_pred cCCCCCEEEECCCCccccchHHHHHHHHHHCCCeEEEcCch-hHHHHHHHHHHHHHHc------CCeEEEEeeecccCHH
Confidence 99999999999999888 58999999999999997442 2248899999999995 664 455666778899
Q ss_pred HHHHHHHHHHhCCeeEEEEEEee
Q 018445 145 FVECKKLIAEIGDMMSVQVIVEG 167 (355)
Q Consensus 145 ~~~~k~~i~~iG~i~~v~~~~~~ 167 (355)
.+.+++++.. ++|..++..+.+
T Consensus 152 i~~l~~~l~g-~~I~~i~Gi~nG 173 (325)
T 3ing_A 152 FSVLDYSILP-SKVKRFRGIVSS 173 (325)
T ss_dssp HHHHHHTCTT-CCEEEEEEECCH
T ss_pred HHHHHHHhhC-CCeeEEEEEEEe
Confidence 9999999854 788888877654
No 61
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=99.64 E-value=2.1e-16 Score=141.23 Aligned_cols=98 Identities=22% Similarity=0.269 Sum_probs=83.7
Q ss_pred CceEEEEecccccchhccchhhh-cCCeEEEEEEEeCCHHH-HHHHHHHHhhhcCCccccccCcchhhhhcC---CCccE
Q 018445 2 APRIAILGAGIFVKTQYIPRLAE-ISDLVSLKFIWSRSEES-AKSAAEVARKHFADVECVWGDNGLEQIIKE---DSILG 76 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~-~~~~~~vvai~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ell~~---~~~D~ 76 (355)
++||||||+|.+|.. |+..+.+ +++ +++++++|+++++ ++.+++ ++ +....+ +++++++++ +++|+
T Consensus 4 ~irVaIIG~G~iG~~-~~~~l~~~~~~-~elvav~d~~~~~~~~~~a~---~~--g~~~~~--~~~e~ll~~~~~~~iDv 74 (312)
T 1nvm_B 4 KLKVAIIGSGNIGTD-LMIKVLRNAKY-LEMGAMVGIDAASDGLARAQ---RM--GVTTTY--AGVEGLIKLPEFADIDF 74 (312)
T ss_dssp CEEEEEECCSHHHHH-HHHHHHHHCSS-EEEEEEECSCTTCHHHHHHH---HT--TCCEES--SHHHHHHHSGGGGGEEE
T ss_pred CCEEEEEcCcHHHHH-HHHHHHhhCcC-eEEEEEEeCChhhhHHHHHH---Hc--CCCccc--CCHHHHHhccCCCCCcE
Confidence 589999999999986 8888865 665 9999999999998 677665 33 333222 789999987 78999
Q ss_pred EEEecCCcccHHHHHHHHHc--CCeEEEecCCCC
Q 018445 77 VAVVLAGQAQVDTSLKLLKA--GKHVIQEKPAAA 108 (355)
Q Consensus 77 V~I~tp~~~H~~~~~~al~~--GkhVl~EKP~a~ 108 (355)
|+++||+..|.+++.+|+++ ||||+||||++.
T Consensus 75 V~~atp~~~h~~~a~~al~a~~Gk~Vi~ekp~~~ 108 (312)
T 1nvm_B 75 VFDATSASAHVQNEALLRQAKPGIRLIDLTPAAI 108 (312)
T ss_dssp EEECSCHHHHHHHHHHHHHHCTTCEEEECSTTCS
T ss_pred EEECCChHHHHHHHHHHHHhCCCCEEEEcCcccc
Confidence 99999999999999999999 999999999874
No 62
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=99.63 E-value=5.8e-16 Score=140.17 Aligned_cols=101 Identities=16% Similarity=0.117 Sum_probs=82.5
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHh-hhcC---Cc--------cccccCcchhhh
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVAR-KHFA---DV--------ECVWGDNGLEQI 68 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~-~~~~---~~--------~~~~~~~~~~el 68 (355)
|.+||||+|+|.+|+. |++.+.++++ ++|++++|++++++..+++... ..++ +. ... +++++++
T Consensus 1 M~irVgIiG~G~iG~~-~~r~l~~~~~-~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v--~~d~~~l 76 (334)
T 2czc_A 1 MKVKVGVNGYGTIGKR-VAYAVTKQDD-MELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEV--AGTLNDL 76 (334)
T ss_dssp CCEEEEEECCSHHHHH-HHHHHHTCTT-EEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCC--SCBHHHH
T ss_pred CCcEEEEEeEhHHHHH-HHHHHhcCCC-CEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEE--cCcHHHh
Confidence 7789999999999986 9999998876 9999999999888877665210 0000 00 012 3789999
Q ss_pred hcCCCccEEEEecCCcccHHHHHHHHHcCCeEEEecCCC
Q 018445 69 IKEDSILGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAA 107 (355)
Q Consensus 69 l~~~~~D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a 107 (355)
+. ++|+|++|||+..|++.+.+++++||||+||||..
T Consensus 77 ~~--~vDvV~~aTp~~~h~~~a~~~l~aGk~Vi~sap~~ 113 (334)
T 2czc_A 77 LE--KVDIIVDATPGGIGAKNKPLYEKAGVKAIFQGGEK 113 (334)
T ss_dssp HT--TCSEEEECCSTTHHHHHHHHHHHHTCEEEECTTSC
T ss_pred cc--CCCEEEECCCccccHHHHHHHHHcCCceEeecccc
Confidence 97 59999999999999999999999999999999984
No 63
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=99.50 E-value=5.6e-14 Score=123.14 Aligned_cols=148 Identities=16% Similarity=0.120 Sum_probs=107.2
Q ss_pred ceEEEEec-ccccchhccchhhhcCCeEEEEEEEeCCHHHH--HHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEE
Q 018445 3 PRIAILGA-GIFVKTQYIPRLAEISDLVSLKFIWSRSEESA--KSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 3 ~rigiiG~-G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I 79 (355)
|||+|+|+ |+||+. ++..+...++ ++|++++|+++++. +.+.+...-...++. . ++|++++++ ++|+|+.
T Consensus 6 mkV~V~Ga~G~mG~~-~~~~~~~~~~-~elva~~d~~~~~~~g~d~~~~~g~~~~~v~-~--~~dl~~~l~--~~DvVID 78 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQ-LIQAALALEG-VQLGAALEREGSSLLGSDAGELAGAGKTGVT-V--QSSLDAVKD--DFDVFID 78 (273)
T ss_dssp EEEEETTTTSHHHHH-HHHHHHHSTT-EECCCEECCTTCTTCSCCTTCSSSSSCCSCC-E--ESCSTTTTT--SCSEEEE
T ss_pred cEEEEECCCCHHHHH-HHHHHHhCCC-CEEEEEEecCchhhhhhhHHHHcCCCcCCce-e--cCCHHHHhc--CCCEEEE
Confidence 79999998 999986 8888887776 99999999987542 111110000000222 1 278999996 4899999
Q ss_pred ecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHHhC---
Q 018445 80 VLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAEIG--- 156 (355)
Q Consensus 80 ~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~iG--- 156 (355)
+|+|..|.+++..|+++|+||+|+|| +.+.++..+|.+++++ .++++..++....+..++.++++.+-++
T Consensus 79 ft~p~~~~~~~~~a~~~G~~vVigTt-G~~~e~~~~L~~~a~~------~~vv~a~N~siGvn~~~~l~~~aa~~~~~~~ 151 (273)
T 1dih_A 79 FTRPEGTLNHLAFCRQHGKGMVIGTT-GFDEAGKQAIRDAAAD------IAIVFAANFSVGVNVMLKLLEKAAKVMGDYT 151 (273)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEECCC-CCCHHHHHHHHHHTTT------SCEEECSCCCHHHHHHHHHHHHHHHHHTTTS
T ss_pred cCChHHHHHHHHHHHhCCCCEEEECC-CCCHHHHHHHHHhcCC------CCEEEEecCcHHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999 7888999999999877 4666655555555555555555544476
Q ss_pred CeeEEEEE
Q 018445 157 DMMSVQVI 164 (355)
Q Consensus 157 ~i~~v~~~ 164 (355)
+|.-++.+
T Consensus 152 dieiiE~H 159 (273)
T 1dih_A 152 DIEIIEAH 159 (273)
T ss_dssp EEEEEEEE
T ss_pred CEEEEEee
Confidence 55555544
No 64
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=99.45 E-value=1.2e-14 Score=121.87 Aligned_cols=100 Identities=13% Similarity=0.061 Sum_probs=82.1
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
..||+|||+|.+|.. |+..+.... +++++|++|.++++...... +++. +.++++++++++ ++|+|+||+
T Consensus 80 ~~rV~IIGaG~~G~~-la~~~~~~~-g~~iVg~~D~dp~k~g~~i~-------gv~V-~~~~dl~ell~~-~ID~ViIA~ 148 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSA-LADYPGFGE-SFELRGFFDVDPEKVGRPVR-------GGVI-EHVDLLPQRVPG-RIEIALLTV 148 (211)
T ss_dssp CEEEEEECCSHHHHH-HHHCSCCCS-SEEEEEEEESCTTTTTCEET-------TEEE-EEGGGHHHHSTT-TCCEEEECS
T ss_pred CCEEEEECccHHHHH-HHHhHhhcC-CcEEEEEEeCCHHHHhhhhc-------CCee-ecHHhHHHHHHc-CCCEEEEeC
Confidence 368999999999985 777643334 59999999999988754322 3332 224899999998 999999999
Q ss_pred CCcccHHHHHHHHHcCCe-EEEecCCCCCHHH
Q 018445 82 AGQAQVDTSLKLLKAGKH-VIQEKPAAANISE 112 (355)
Q Consensus 82 p~~~H~~~~~~al~~Gkh-Vl~EKP~a~~~~e 112 (355)
|+..|.+++..++++|+| |++|||++.++.+
T Consensus 149 Ps~~~~ei~~~l~~aGi~~Ilnf~P~~l~vp~ 180 (211)
T 2dt5_A 149 PREAAQKAADLLVAAGIKGILNFAPVVLEVPK 180 (211)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECSSSCCCCCT
T ss_pred CchhHHHHHHHHHHcCCCEEEECCcccccCCC
Confidence 999999999999999977 9999999999875
No 65
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=99.34 E-value=9e-13 Score=123.90 Aligned_cols=192 Identities=14% Similarity=0.099 Sum_probs=132.7
Q ss_pred CCc-eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccc---ccc-CcchhhhhcCCCcc
Q 018445 1 MAP-RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVEC---VWG-DNGLEQIIKEDSIL 75 (355)
Q Consensus 1 m~~-rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~ell~~~~~D 75 (355)
|+. +|+|+|+|.+|+. ++..|.+.+ .+ +.++++++++++.+++. . +++.. ... .++++++++ ++|
T Consensus 1 M~~k~VlViGaG~iG~~-ia~~L~~~G--~~-V~v~~R~~~~a~~la~~---~-~~~~~~~~Dv~d~~~l~~~l~--~~D 70 (450)
T 1ff9_A 1 MATKSVLMLGSGFVTRP-TLDVLTDSG--IK-VTVACRTLESAKKLSAG---V-QHSTPISLDVNDDAALDAEVA--KHD 70 (450)
T ss_dssp -CCCEEEEECCSTTHHH-HHHHHHTTT--CE-EEEEESSHHHHHHTTTT---C-TTEEEEECCTTCHHHHHHHHT--TSS
T ss_pred CCCCEEEEECCCHHHHH-HHHHHHhCc--CE-EEEEECCHHHHHHHHHh---c-CCceEEEeecCCHHHHHHHHc--CCc
Confidence 654 8999999999985 888888644 56 57889999988776541 1 11111 110 024556776 499
Q ss_pred EEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHHh
Q 018445 76 GVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAEI 155 (355)
Q Consensus 76 ~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~i 155 (355)
+|+.++|...|..+..+++++|+||+++ +....+..+|.+.|+++ |+.++.++.++..+....+++++.+.
T Consensus 71 vVIn~a~~~~~~~i~~a~l~~g~~vvd~---~~~~~~~~~l~~aA~~a------Gv~~i~g~g~~pg~~~~~a~~li~q~ 141 (450)
T 1ff9_A 71 LVISLIPYTFHATVIKSAIRQKKHVVTT---SYVSPAMMELDQAAKDA------GITVMNEIGLDPGIDHLYAIKTIEEV 141 (450)
T ss_dssp EEEECCC--CHHHHHHHHHHHTCEEEES---SCCCHHHHHTHHHHHHT------TCEEECSCBBTTBHHHHHHHHHHHHH
T ss_pred EEEECCccccchHHHHHHHhCCCeEEEe---ecccHHHHHHHHHHHHC------CCeEEeCCCCcCchHHHHHHHHHHHh
Confidence 9999999999999999999999999998 45566789999999994 99999999999999999999999985
Q ss_pred ----CCeeEEEEEEeeccCCCCCccCcccccc-ccCccccchhhHHHHHHHHHhCCcceeEEEee
Q 018445 156 ----GDMMSVQVIVEGSMNSSNPYFSSSWRRN-FTGGFILDMGVHFIAGLRMITGCEVVSVSAIT 215 (355)
Q Consensus 156 ----G~i~~v~~~~~~~~~~~~~~~~~~w~~~-~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~ 215 (355)
|++.++............+..+..|+.. .+.|.+. |..|.++++.+.+++.|.+..
T Consensus 142 ~~~gg~i~~~~~~~G~~p~~~~~~~~l~~~~~~s~~g~l~----~~~~~~~~~~~G~~~~v~~~~ 202 (450)
T 1ff9_A 142 HAAGGKIKTFLSYCGGLPAPESSDNPLGYKFSWSSRGVLL----ALRNAASFYKDGKVTNVAGPE 202 (450)
T ss_dssp HHTTCEEEEEEEEEEEEECGGGCCSTTSCCCSSCHHHHHH----HTTSCEEEEETTEEEEECTHH
T ss_pred cccCCeeeEEEEEEcccCccccCCccccceeccChHHHHH----HhhChhheEeCCeEEEEeCcc
Confidence 8899888765433211111111223221 1123322 666777777743677776643
No 66
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=99.33 E-value=1.2e-11 Score=109.38 Aligned_cols=116 Identities=8% Similarity=0.055 Sum_probs=93.9
Q ss_pred CceEEEEec-ccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEe
Q 018445 2 APRIAILGA-GIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 2 ~~rigiiG~-G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
.+||+|+|+ |++|+. |++.+.+.+ +++++.+++.... +. .. +++. | +|++|+++++++|+|+|+
T Consensus 7 ~~rVaViG~sG~~G~~-~~~~l~~~g--~~~V~~V~p~~~g-~~------~~--G~~v-y--~sl~el~~~~~~D~viI~ 71 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTF-HSEQAIAYG--TKMVGGVTPGKGG-TT------HL--GLPV-F--NTVREAVAATGATASVIY 71 (288)
T ss_dssp TCEEEEETTTSHHHHH-HHHHHHHHT--CEEEEEECTTCTT-CE------ET--TEEE-E--SSHHHHHHHHCCCEEEEC
T ss_pred CCEEEEECCCChHHHH-HHHHHHHCC--CeEEEEeCCCccc-ce------eC--Ceec-c--CCHHHHhhcCCCCEEEEe
Confidence 579999998 999986 899988764 6777777764210 10 11 5543 3 899999985569999999
Q ss_pred cCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecc
Q 018445 81 LAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENY 139 (355)
Q Consensus 81 tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~ 139 (355)
||+..|.+++.+|+++|+|++++.+...+.++.++|.+.++++ ++.+ +|.|.
T Consensus 72 tP~~~~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~------gv~l-iGPNc 123 (288)
T 2nu8_A 72 VPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEA------GVRM-IGPNT 123 (288)
T ss_dssp CCGGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHH------TCEE-ECSSC
T ss_pred cCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHc------CCEE-EecCC
Confidence 9999999999999999999999999888999999999999994 7755 55554
No 67
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=99.26 E-value=5.8e-13 Score=111.94 Aligned_cols=101 Identities=15% Similarity=0.252 Sum_probs=77.6
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
..||+|||+|.+|.. ++..+.....+++++|++|.++++...... +++. +.++++++++++. |+|+|++
T Consensus 85 ~~rV~IIGAG~~G~~-La~~~~~~~~g~~iVg~~D~dp~k~g~~i~-------gv~V-~~~~dl~eli~~~--D~ViIAv 153 (215)
T 2vt3_A 85 MTDVILIGVGNLGTA-FLHYNFTKNNNTKISMAFDINESKIGTEVG-------GVPV-YNLDDLEQHVKDE--SVAILTV 153 (215)
T ss_dssp --CEEEECCSHHHHH-HHHCC------CCEEEEEESCTTTTTCEET-------TEEE-EEGGGHHHHCSSC--CEEEECS
T ss_pred CCEEEEEccCHHHHH-HHHHHhcccCCcEEEEEEeCCHHHHHhHhc-------CCee-echhhHHHHHHhC--CEEEEec
Confidence 368999999999985 676433222348999999999998754322 4332 2247899999874 9999999
Q ss_pred CCcccHHHHHHHHHcCCe-EEEecCCCCCHHHH
Q 018445 82 AGQAQVDTSLKLLKAGKH-VIQEKPAAANISEI 113 (355)
Q Consensus 82 p~~~H~~~~~~al~~Gkh-Vl~EKP~a~~~~e~ 113 (355)
|+..|.+++..++++|++ |++|||+..++.++
T Consensus 154 Ps~~~~ei~~~l~~aGi~~Ilnf~P~~l~vp~~ 186 (215)
T 2vt3_A 154 PAVAAQSITDRLVALGIKGILNFTPARLNVPEH 186 (215)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEECSSCCCCCCTT
T ss_pred CchhHHHHHHHHHHcCCCEEEEcCceeccCCCc
Confidence 999999999999999988 99999999998753
No 68
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=99.24 E-value=1.5e-11 Score=112.43 Aligned_cols=143 Identities=15% Similarity=0.147 Sum_probs=108.8
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccc-cCcchhhhhcCCCccEEEEe
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVW-GDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ell~~~~~D~V~I~ 80 (355)
..||+|||+|.+|+. ++..|.+. .+ +.++|+++++++.+++ +.. .+.... ..+++++++++ +|+|+++
T Consensus 16 ~~~v~IiGaG~iG~~-ia~~L~~~---~~-V~V~~R~~~~a~~la~---~~~-~~~~d~~~~~~l~~ll~~--~DvVIn~ 84 (365)
T 2z2v_A 16 HMKVLILGAGNIGRA-IAWDLKDE---FD-VYIGDVNNENLEKVKE---FAT-PLKVDASNFDKLVEVMKE--FELVIGA 84 (365)
T ss_dssp CCEEEEECCSHHHHH-HHHHHTTT---SE-EEEEESCHHHHHHHTT---TSE-EEECCTTCHHHHHHHHTT--CSCEEEC
T ss_pred CCeEEEEcCCHHHHH-HHHHHHcC---Ce-EEEEECCHHHHHHHHh---hCC-eEEEecCCHHHHHHHHhC--CCEEEEC
Confidence 468999999999985 78888765 35 4789999999998775 221 011100 01567888885 8999999
Q ss_pred cCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHH--HHHHHHHhCCe
Q 018445 81 LAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVE--CKKLIAEIGDM 158 (355)
Q Consensus 81 tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~--~k~~i~~iG~i 158 (355)
+|+..|.+++++|+++|+|++. ++.+..+.++|.+.|++ .|+.++.+. .++|.... +..++++++ +
T Consensus 85 ~P~~~~~~v~~a~l~~G~~~vD---~s~~~~~~~~l~~~Ak~------aG~~~l~g~--G~dPG~~~~~a~~~~~~~~-v 152 (365)
T 2z2v_A 85 LPGFLGFKSIKAAIKSKVDMVD---VSFMPENPLELRDEAEK------AQVTIVFDA--GFAPGLSNILMGRIFQELD-L 152 (365)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEE---CCCCSSCGGGGHHHHHH------TTCEEECSC--BTTTBHHHHHHHHHHHHSC-E
T ss_pred CChhhhHHHHHHHHHhCCeEEE---ccCCcHHHHHHHHHHHH------cCCEEEECC--CCcchHHHHHHHHHHHhcC-C
Confidence 9999999999999999999987 55666777899999999 488887655 58888854 444555688 9
Q ss_pred eEEEEEEee
Q 018445 159 MSVQVIVEG 167 (355)
Q Consensus 159 ~~v~~~~~~ 167 (355)
.++.+..++
T Consensus 153 ~~i~~~~Gg 161 (365)
T 2z2v_A 153 KEGYIYVGG 161 (365)
T ss_dssp EEEEEEEEE
T ss_pred CEEEEEecc
Confidence 999987643
No 69
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=99.22 E-value=2.9e-10 Score=99.38 Aligned_cols=145 Identities=15% Similarity=0.120 Sum_probs=103.0
Q ss_pred CCceEEEEe-cccccchhccchhhhcCCeEEEEEEEeCCHHH--HHHHHHHHhhhcCCccccccCcchhhhhcCCCccEE
Q 018445 1 MAPRIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWSRSEES--AKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGV 77 (355)
Q Consensus 1 m~~rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V 77 (355)
|++||+|+| +|+||+. ++..+.+.++ ++|++++|+++.. .+.+.+.......+++. ++|+++++++ +|+|
T Consensus 20 ~~irV~V~Ga~GrMGr~-i~~~v~~~~~-~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v---~~dl~~ll~~--aDVv 92 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRE-LITAIQRRKD-VELCAVLVRKGSSFVDKDASILIGSDFLGVRI---TDDPESAFSN--TEGI 92 (288)
T ss_dssp -CEEEEESSTTSHHHHH-HHHHHHTCSS-EEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBC---BSCHHHHTTS--CSEE
T ss_pred CCeEEEEECCCCHHHHH-HHHHHHhCCC-CEEEEEEecCCccccccchHHhhccCcCCcee---eCCHHHHhcC--CCEE
Confidence 457999999 9999986 8888888776 9999999997532 11111100000113332 3899999984 8999
Q ss_pred EEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH---
Q 018445 78 AVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--- 154 (355)
Q Consensus 78 ~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--- 154 (355)
+-+|++..+++.+..|+++|+||.+-.. ..+.++..+|.++|++. + +-+..-|+..+..+.++++.
T Consensus 93 IDFT~p~a~~~~~~~~l~~Gv~vViGTT-G~~~e~~~~L~~aa~~~------~----~~~a~N~SiGv~ll~~l~~~aa~ 161 (288)
T 3ijp_A 93 LDFSQPQASVLYANYAAQKSLIHIIGTT-GFSKTEEAQIADFAKYT------T----IVKSGNMSLGVNLLANLVKRAAK 161 (288)
T ss_dssp EECSCHHHHHHHHHHHHHHTCEEEECCC-CCCHHHHHHHHHHHTTS------E----EEECSCCCHHHHHHHHHHHHHHH
T ss_pred EEcCCHHHHHHHHHHHHHcCCCEEEECC-CCCHHHHHHHHHHhCcC------C----EEEECCCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999764 35677777888888762 2 34455567777777776664
Q ss_pred -hC---CeeEEEE
Q 018445 155 -IG---DMMSVQV 163 (355)
Q Consensus 155 -iG---~i~~v~~ 163 (355)
++ ++--++.
T Consensus 162 ~l~~~~dieIiE~ 174 (288)
T 3ijp_A 162 ALDDDFDIEIYEM 174 (288)
T ss_dssp HSCTTSEEEEEEE
T ss_pred hcCCCCCEEEEEc
Confidence 77 4444443
No 70
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=99.21 E-value=2.1e-10 Score=99.98 Aligned_cols=135 Identities=13% Similarity=0.090 Sum_probs=99.3
Q ss_pred CC-ceEEEEe-cccccchhccchhhhcCCeEEEEEEEeCCHHHH--HHHHHHHhhhcCCccccccCcchhhhhcCCCccE
Q 018445 1 MA-PRIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWSRSEESA--KSAAEVARKHFADVECVWGDNGLEQIIKEDSILG 76 (355)
Q Consensus 1 m~-~rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~ 76 (355)
|+ |||+|+| +|+||+. ++..+.+.++ ++|++++|++.... +.+.+.. ...+++.. ++|+++++++ +|+
T Consensus 5 M~mikV~V~Ga~G~MG~~-i~~~l~~~~~-~eLv~~~d~~~~~~~G~d~gel~-g~~~gv~v---~~dl~~ll~~--~DV 76 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRM-LIEAVLAAPD-ATLVGALDRTGSPQLGQDAGAFL-GKQTGVAL---TDDIERVCAE--ADY 76 (272)
T ss_dssp -CCEEEEESSTTSHHHHH-HHHHHHHCTT-EEEEEEBCCTTCTTTTSBTTTTT-TCCCSCBC---BCCHHHHHHH--CSE
T ss_pred ccccEEEEECCCCHHHHH-HHHHHHhCCC-CEEEEEEEecCcccccccHHHHh-CCCCCcee---cCCHHHHhcC--CCE
Confidence 65 6999999 8999986 8888888776 99999999975421 1111100 01123332 3899999985 899
Q ss_pred EEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH
Q 018445 77 VAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE 154 (355)
Q Consensus 77 V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~ 154 (355)
|+.+|++..+.+++..|+++|+||.+-.. ..+.++..+|.++|++. + +-+..-|+..+..+.++++.
T Consensus 77 VIDfT~p~a~~~~~~~al~~G~~vVigTT-G~s~~~~~~L~~aa~~~------~----vv~a~N~s~Gv~l~~~~~~~ 143 (272)
T 4f3y_A 77 LIDFTLPEGTLVHLDAALRHDVKLVIGTT-GFSEPQKAQLRAAGEKI------A----LVFSANMSVGVNVTMKLLEF 143 (272)
T ss_dssp EEECSCHHHHHHHHHHHHHHTCEEEECCC-CCCHHHHHHHHHHTTTS------E----EEECSCCCHHHHHHHHHHHH
T ss_pred EEEcCCHHHHHHHHHHHHHcCCCEEEECC-CCCHHHHHHHHHHhccC------C----EEEECCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999764 46778888888888762 3 34455567777777666653
No 71
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=99.17 E-value=2.7e-10 Score=105.82 Aligned_cols=153 Identities=14% Similarity=0.136 Sum_probs=113.4
Q ss_pred ceEEEEecccccchhccchhhhcCCeE-EEEEEEeCCHHHHHHHHHHHhhhc-CCccc---cc-cCcchhhhhcCCCccE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLV-SLKFIWSRSEESAKSAAEVARKHF-ADVEC---VW-GDNGLEQIIKEDSILG 76 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~-~vvai~d~~~~~~~~~~~~~~~~~-~~~~~---~~-~~~~~~ell~~~~~D~ 76 (355)
+||+|||+|.+|.. ++..|.+.++ + ..+.++|+++++++.+++...... +.+.. .. ..+++++++++.++|+
T Consensus 2 ~kVlIiGaGgiG~~-ia~~L~~~g~-~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv 79 (405)
T 4ina_A 2 AKVLQIGAGGVGGV-VAHKMAMNRE-VFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI 79 (405)
T ss_dssp CEEEEECCSHHHHH-HHHHHHTCTT-TCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCC-CceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence 49999999999985 8888887765 3 456889999999999887442210 11211 00 0146778888767899
Q ss_pred EEEecCCcccHHHHHHHHHcCCeEE----EecCCC--CCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHH--
Q 018445 77 VAVVLAGQAQVDTSLKLLKAGKHVI----QEKPAA--ANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVEC-- 148 (355)
Q Consensus 77 V~I~tp~~~H~~~~~~al~~GkhVl----~EKP~a--~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~-- 148 (355)
|+.++|+..|..++.+|+++|+|++ +++|.. ....+..++.+.++++ |+.++.+.. +.|....+
T Consensus 80 Vin~ag~~~~~~v~~a~l~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~a------G~~~i~g~G--~~PG~~~l~a 151 (405)
T 4ina_A 80 VLNIALPYQDLTIMEACLRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEK------GVMALLGSG--FDPGVTNVFC 151 (405)
T ss_dssp EEECSCGGGHHHHHHHHHHHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHH------TCEEEECCB--TTTBHHHHHH
T ss_pred EEECCCcccChHHHHHHHHhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHh------CCEEEEcCC--CCccHHHHHH
Confidence 9999999999999999999999998 676632 2356667899999995 888888887 67766544
Q ss_pred HHHHHH-hCCeeEEEEEE
Q 018445 149 KKLIAE-IGDMMSVQVIV 165 (355)
Q Consensus 149 k~~i~~-iG~i~~v~~~~ 165 (355)
..+.++ ++++..+.+..
T Consensus 152 ~~~~~~~~~~i~~i~i~~ 169 (405)
T 4ina_A 152 AYAQKHYFDEIHEIDILD 169 (405)
T ss_dssp HHHHHHTCSEEEEEEEEE
T ss_pred HHHHHhccCcccEEEEEE
Confidence 444555 89999888753
No 72
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=99.16 E-value=6e-10 Score=95.55 Aligned_cols=117 Identities=15% Similarity=0.140 Sum_probs=94.3
Q ss_pred ceEEEEec-ccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 3 PRIAILGA-GIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 3 ~rigiiG~-G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
|||+|+|+ |.||+. ++..+.+.++ .+|++++|++ +++++++. .++|+|+-+|
T Consensus 1 mkV~V~Ga~G~mG~~-i~~~~~~~~~-~elva~~d~~------------------------~dl~~~~~-~~~DvvIDfT 53 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTT-MVRAVAAADD-LTLSAELDAG------------------------DPLSLLTD-GNTEVVIDFT 53 (245)
T ss_dssp CEEEEETTTSHHHHH-HHHHHHHCTT-CEEEEEECTT------------------------CCTHHHHH-TTCCEEEECS
T ss_pred CEEEEECCCCHHHHH-HHHHHHhCCC-CEEEEEEccC------------------------CCHHHHhc-cCCcEEEEcc
Confidence 59999996 999986 7888776666 8999999864 34667766 3589999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH
Q 018445 82 AGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE 154 (355)
Q Consensus 82 p~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~ 154 (355)
++..+.+++..|+++|+|+++.++ +.+.++..+|.++++++ +++.+++..|+ +.....+.++++.
T Consensus 54 ~p~a~~~~~~~a~~~g~~~VigTT-G~~~e~~~~l~~aa~~~-----~~~~vv~a~N~--siGv~ll~~l~~~ 118 (245)
T 1p9l_A 54 HPDVVMGNLEFLIDNGIHAVVGTT-GFTAERFQQVESWLVAK-----PNTSVLIAPNF--AIGAVLSMHFAKQ 118 (245)
T ss_dssp CTTTHHHHHHHHHHTTCEEEECCC-CCCHHHHHHHHHHHHTS-----TTCEEEECSCC--CHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHcCCCEEEcCC-CCCHHHHHHHHHHHHhC-----CCCCEEEECCc--cHHHHHHHHHHHH
Confidence 999999999999999999999999 57888888999999873 36666665554 6666667777664
No 73
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=99.16 E-value=5e-11 Score=107.34 Aligned_cols=103 Identities=14% Similarity=0.102 Sum_probs=77.5
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeC--CHHHHHHHHHHHhhh--cCCcc--------------ccccC
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSR--SEESAKSAAEVARKH--FADVE--------------CVWGD 62 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~--~~~~~~~~~~~~~~~--~~~~~--------------~~~~~ 62 (355)
|.+||||+|+|++|+. +++.+.++++ ++|++|.|+ +++.+..+.+.-.-+ +++.. ..+..
T Consensus 2 M~ikVgI~G~G~iGr~-~~R~l~~~~~-vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~ 79 (335)
T 1u8f_O 2 GKVKVGVNGFGRIGRL-VTRAAFNSGK-VDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQE 79 (335)
T ss_dssp -CCEEEEECCSHHHHH-HHHHHHHHCS-SEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECC
T ss_pred CceEEEEEccCHHHHH-HHHHHHcCCC-cEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEec
Confidence 5689999999999986 8999888876 999999996 777766654310000 11110 00111
Q ss_pred cchhhh-hcCCCccEEEEecCCcccHHHHHHHHHcC-CeEEEecC
Q 018445 63 NGLEQI-IKEDSILGVAVVLAGQAQVDTSLKLLKAG-KHVIQEKP 105 (355)
Q Consensus 63 ~~~~el-l~~~~~D~V~I~tp~~~H~~~~~~al~~G-khVl~EKP 105 (355)
.|++++ +.+.++|+|+.|||...|.+.+.+++++| |+|++++|
T Consensus 80 ~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 80 RDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAP 124 (335)
T ss_dssp SSGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSC
T ss_pred CCHHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccC
Confidence 367777 44467999999999999999999999999 99999999
No 74
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=99.14 E-value=1.2e-10 Score=99.75 Aligned_cols=130 Identities=7% Similarity=0.001 Sum_probs=95.6
Q ss_pred CC-ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEE
Q 018445 1 MA-PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 1 m~-~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I 79 (355)
|+ |||+|+|+|+||+. +...+.+.++ +|++++|++++. .. +++. ++|+++++ ++|+|+-
T Consensus 1 M~MmkI~ViGaGrMG~~-i~~~l~~~~~--eLva~~d~~~~~---------~~--gv~v---~~dl~~l~---~~DVvID 60 (243)
T 3qy9_A 1 MASMKILLIGYGAMNQR-VARLAEEKGH--EIVGVIENTPKA---------TT--PYQQ---YQHIADVK---GADVAID 60 (243)
T ss_dssp --CCEEEEECCSHHHHH-HHHHHHHTTC--EEEEEECSSCC-----------C--CSCB---CSCTTTCT---TCSEEEE
T ss_pred CCceEEEEECcCHHHHH-HHHHHHhCCC--EEEEEEecCccc---------cC--CCce---eCCHHHHh---CCCEEEE
Confidence 65 69999999999985 8888887764 999999998762 12 5443 28999988 4899998
Q ss_pred ecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH----h
Q 018445 80 VLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE----I 155 (355)
Q Consensus 80 ~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~----i 155 (355)
+|++....+.+. +++|+||++..+ +.+.++.++|.++|++. + + -+..-|+-....+.++++. +
T Consensus 61 ft~p~a~~~~~~--l~~g~~vVigTT-G~s~e~~~~l~~aa~~~------~--v--~~a~N~S~Gv~l~~~~~~~aa~~l 127 (243)
T 3qy9_A 61 FSNPNLLFPLLD--EDFHLPLVVATT-GEKEKLLNKLDELSQNM------P--V--FFSANMSYGVHALTKILAAAVPLL 127 (243)
T ss_dssp CSCHHHHHHHHT--SCCCCCEEECCC-SSHHHHHHHHHHHTTTS------E--E--EECSSCCHHHHHHHHHHHHHHHHT
T ss_pred eCChHHHHHHHH--HhcCCceEeCCC-CCCHHHHHHHHHHHhcC------C--E--EEECCccHHHHHHHHHHHHHHHhc
Confidence 888877777776 999999999987 56778888888888762 3 2 3444566666666666653 7
Q ss_pred CCeeEEEEE
Q 018445 156 GDMMSVQVI 164 (355)
Q Consensus 156 G~i~~v~~~ 164 (355)
++ +.+++.
T Consensus 128 ~~-~dieI~ 135 (243)
T 3qy9_A 128 DD-FDIELT 135 (243)
T ss_dssp TT-SEEEEE
T ss_pred CC-CCEEEE
Confidence 75 555554
No 75
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.12 E-value=1.5e-10 Score=101.06 Aligned_cols=100 Identities=19% Similarity=0.178 Sum_probs=78.6
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
.|||||||+|.||.. +...|.+.+ .+ +.++|+++++++.+.+ ++ ++.. ++++++++++ +|+|++++
T Consensus 3 ~m~i~iiG~G~mG~~-~a~~l~~~g--~~-v~~~~~~~~~~~~~~~---~~--g~~~---~~~~~~~~~~--~D~Vi~~v 68 (259)
T 2ahr_A 3 AMKIGIIGVGKMASA-IIKGLKQTP--HE-LIISGSSLERSKEIAE---QL--ALPY---AMSHQDLIDQ--VDLVILGI 68 (259)
T ss_dssp CCEEEEECCSHHHHH-HHHHHTTSS--CE-EEEECSSHHHHHHHHH---HH--TCCB---CSSHHHHHHT--CSEEEECS
T ss_pred ccEEEEECCCHHHHH-HHHHHHhCC--Ce-EEEECCCHHHHHHHHH---Hc--CCEe---eCCHHHHHhc--CCEEEEEe
Confidence 479999999999985 788887654 34 5789999999988775 23 3332 2789999985 89999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHH
Q 018445 82 AGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENAL 117 (355)
Q Consensus 82 p~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~ 117 (355)
|+..|.+++.. ++.|+ ++|++|.+.+.++..++.
T Consensus 69 ~~~~~~~v~~~-l~~~~-~vv~~~~~~~~~~l~~~~ 102 (259)
T 2ahr_A 69 KPQLFETVLKP-LHFKQ-PIISMAAGISLQRLATFV 102 (259)
T ss_dssp CGGGHHHHHTT-SCCCS-CEEECCTTCCHHHHHHHH
T ss_pred CcHhHHHHHHH-hccCC-EEEEeCCCCCHHHHHHhc
Confidence 98888877765 45666 999999999988766654
No 76
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=99.10 E-value=1.3e-10 Score=104.36 Aligned_cols=104 Identities=17% Similarity=0.130 Sum_probs=75.5
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeC--CHHHHHHHHHHHhhh--cC-Ccc---------------ccc
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSR--SEESAKSAAEVARKH--FA-DVE---------------CVW 60 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~--~~~~~~~~~~~~~~~--~~-~~~---------------~~~ 60 (355)
|++||||+|+|++|+. +++.+.++++ ++|++|.|+ +++.+....+.-..+ ++ +.. ..+
T Consensus 2 m~ikVgI~G~GrIGr~-l~R~l~~~p~-vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~ 79 (337)
T 3e5r_O 2 GKIKIGINGFGRIGRL-VARVALQSED-VELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVF 79 (337)
T ss_dssp CCEEEEEECCSHHHHH-HHHHHHTCSS-EEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEE
T ss_pred CceEEEEECcCHHHHH-HHHHHhCCCC-eEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEE
Confidence 5689999999999986 8999888876 999999995 565554443110111 11 100 011
Q ss_pred cCcchhhh-hcCCCccEEEEecCCcccHHHHHHHHHcCC-eEEEecCC
Q 018445 61 GDNGLEQI-IKEDSILGVAVVLAGQAQVDTSLKLLKAGK-HVIQEKPA 106 (355)
Q Consensus 61 ~~~~~~el-l~~~~~D~V~I~tp~~~H~~~~~~al~~Gk-hVl~EKP~ 106 (355)
...|++++ ..+.++|+|+.|||...|.+.+.+++++|+ +|++++|.
T Consensus 80 ~~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa 127 (337)
T 3e5r_O 80 GIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPS 127 (337)
T ss_dssp CCSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred ecCChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCC
Confidence 11267776 333569999999999999999999999995 79999996
No 77
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=99.08 E-value=2.7e-10 Score=102.82 Aligned_cols=100 Identities=11% Similarity=0.027 Sum_probs=76.4
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHh-hhcCCccc---------cccCcchhhhhcCC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVAR-KHFADVEC---------VWGDNGLEQIIKED 72 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~-~~~~~~~~---------~~~~~~~~ell~~~ 72 (355)
+||||+|+|.+|+. +++.|.++++ ++|++++|++++.....+.+-. ..++.... .....+.++++.
T Consensus 2 ikVgIiGaG~iG~~-l~r~L~~~~~-~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~-- 77 (337)
T 1cf2_P 2 KAVAINGYGTVGKR-VADAIAQQDD-MKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLD-- 77 (337)
T ss_dssp EEEEEECCSTTHHH-HHHHHHTSSS-EEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHH--
T ss_pred eEEEEEeECHHHHH-HHHHHHcCCC-cEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhc--
Confidence 69999999999986 8999988877 9999999998776655444200 00111000 000136778876
Q ss_pred CccEEEEecCCcccHHHHHHHHHcCCeEEEecCC
Q 018445 73 SILGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPA 106 (355)
Q Consensus 73 ~~D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~ 106 (355)
++|+|+.|||+..|.+.+.+++++|++|++++|-
T Consensus 78 ~vDvV~~atp~~~~~~~a~~~l~aG~~VId~sp~ 111 (337)
T 1cf2_P 78 EADIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGE 111 (337)
T ss_dssp TCSEEEECCSTTHHHHHHHHHHHHTCCEEECTTS
T ss_pred CCCEEEECCCchhhHHHHHHHHHcCCEEEEecCC
Confidence 4999999999999999999999999999999997
No 78
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=99.01 E-value=1.2e-09 Score=100.15 Aligned_cols=143 Identities=17% Similarity=0.184 Sum_probs=100.8
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccc-cCcchhhhhcCCCccEEEEe
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVW-GDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ell~~~~~D~V~I~ 80 (355)
+|||+|+|+|.+|+. .+..|.+. .+| .++|++.++++.+.+.. ..+.... ..+++++++++ .|+|+.+
T Consensus 16 ~mkilvlGaG~vG~~-~~~~L~~~---~~v-~~~~~~~~~~~~~~~~~----~~~~~d~~d~~~l~~~~~~--~DvVi~~ 84 (365)
T 3abi_A 16 HMKVLILGAGNIGRA-IAWDLKDE---FDV-YIGDVNNENLEKVKEFA----TPLKVDASNFDKLVEVMKE--FELVIGA 84 (365)
T ss_dssp CCEEEEECCSHHHHH-HHHHHTTT---SEE-EEEESCHHHHHHHTTTS----EEEECCTTCHHHHHHHHTT--CSEEEEC
T ss_pred ccEEEEECCCHHHHH-HHHHHhcC---CCe-EEEEcCHHHHHHHhccC----CcEEEecCCHHHHHHHHhC--CCEEEEe
Confidence 589999999999975 67777653 344 47799999888765421 1111111 01345566665 8999999
Q ss_pred cCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHH--HHHHHHHhCCe
Q 018445 81 LAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVE--CKKLIAEIGDM 158 (355)
Q Consensus 81 tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~--~k~~i~~iG~i 158 (355)
+|+..|..++++|+++|+|++- ++.+.++.++|.+.|+++ |+.++.+. =++|.... ++.+++++ ++
T Consensus 85 ~p~~~~~~v~~~~~~~g~~yvD---~s~~~~~~~~l~~~a~~~------g~~~i~~~--G~~PG~~~~~a~~~~~~~-~~ 152 (365)
T 3abi_A 85 LPGFLGFKSIKAAIKSKVDMVD---VSFMPENPLELRDEAEKA------QVTIVFDA--GFAPGLSNILMGRIFQEL-DL 152 (365)
T ss_dssp CCGGGHHHHHHHHHHHTCEEEE---CCCCSSCGGGGHHHHHHT------TCEEECCC--BTTTBHHHHHHHHHHHHS-CE
T ss_pred cCCcccchHHHHHHhcCcceEe---eeccchhhhhhhhhhccC------CceeeecC--CCCCchHHHHHHHHHHhc-cc
Confidence 9999999999999999999876 566666778888999994 88777654 47787754 44455566 46
Q ss_pred eEEEEEEee
Q 018445 159 MSVQVIVEG 167 (355)
Q Consensus 159 ~~v~~~~~~ 167 (355)
..+....++
T Consensus 153 ~~~~~~~gg 161 (365)
T 3abi_A 153 KEGYIYVGG 161 (365)
T ss_dssp EEEEEEEEE
T ss_pred cceeEEecc
Confidence 666665543
No 79
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=98.90 E-value=1.8e-09 Score=97.35 Aligned_cols=102 Identities=14% Similarity=0.020 Sum_probs=74.6
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHH--hhhcC----C-c---c--ccccCcchhhh
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVA--RKHFA----D-V---E--CVWGDNGLEQI 68 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~--~~~~~----~-~---~--~~~~~~~~~el 68 (355)
|.+||||+|+|.+|+. +++.+..+++ ++|++++|.+++....+.+.- .-+.. + + . ......+.+++
T Consensus 1 MmikVgI~G~G~IGr~-v~r~l~~~~~-~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~ 78 (343)
T 2yyy_A 1 MPAKVLINGYGSIGKR-VADAVSMQDD-MEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDI 78 (343)
T ss_dssp -CEEEEEECCSHHHHH-HHHHHHHSSS-EEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGT
T ss_pred CceEEEEECCCHHHHH-HHHHHHhCCC-ceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHh
Confidence 6689999999999986 8999887776 999999998876665544310 00000 0 0 0 00001355666
Q ss_pred hcCCCccEEEEecCCcccHHHHH-HHHHcCCeEEEecCC
Q 018445 69 IKEDSILGVAVVLAGQAQVDTSL-KLLKAGKHVIQEKPA 106 (355)
Q Consensus 69 l~~~~~D~V~I~tp~~~H~~~~~-~al~~GkhVl~EKP~ 106 (355)
+. ++|+|+.|||...|.+.+. .++++|++|++.+|.
T Consensus 79 ~~--~vDiV~eatg~~~s~~~a~~~~l~aG~~VI~sap~ 115 (343)
T 2yyy_A 79 IE--DADIVVDGAPKKIGKQNLENIYKPHKVKAILQGGE 115 (343)
T ss_dssp GG--GCSEEEECCCTTHHHHHHHHTTTTTTCEEEECTTS
T ss_pred cc--CCCEEEECCCccccHHHHHHHHHHCCCEEEECCCc
Confidence 65 5999999999999999996 999999999999996
No 80
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=98.82 E-value=7.4e-09 Score=93.45 Aligned_cols=92 Identities=15% Similarity=0.092 Sum_probs=70.1
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccc--------------cCcchhhh
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVW--------------GDNGLEQI 68 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~el 68 (355)
+||||+|+|.+|+. |++.+.++++ ++|++++|++++.....+. +. +++... ..++++++
T Consensus 2 ikVgIiGaG~iG~~-~~r~L~~~p~-~elvav~d~~~~~~~~~a~---~~--g~~~~~~~~~~~~~~~~~v~v~~~~e~l 74 (340)
T 1b7g_O 2 VNVAVNGYGTIGKR-VADAIIKQPD-MKLVGVAKTSPNYEAFIAH---RR--GIRIYVPQQSIKKFEESGIPVAGTVEDL 74 (340)
T ss_dssp EEEEEECCSHHHHH-HHHHHHTCTT-EEEEEEECSSCSHHHHHHH---HT--TCCEECCGGGHHHHHTTTCCCCCCHHHH
T ss_pred eEEEEEecCHHHHH-HHHHHHcCCC-CEEEEEEcCChHHHHHHHH---hc--CcceecCcCHHHHhcccccccccCHhHh
Confidence 79999999999986 8999998877 9999999998777665554 21 221110 00234444
Q ss_pred hcCCCccEEEEecCCcccHHHHHHHHHcCCeEEEe
Q 018445 69 IKEDSILGVAVVLAGQAQVDTSLKLLKAGKHVIQE 103 (355)
Q Consensus 69 l~~~~~D~V~I~tp~~~H~~~~~~al~~GkhVl~E 103 (355)
++ ++|+|+.|||+..+.+.+..++++|+.++.-
T Consensus 75 ~~--~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~ 107 (340)
T 1b7g_O 75 IK--TSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQ 107 (340)
T ss_dssp HH--HCSEEEECCSTTHHHHHHHHHHHTTCEEEEC
T ss_pred hc--CCCEEEECCCCchhHHHHHHHHHcCCeEEEe
Confidence 43 4999999999999999999999999776654
No 81
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.80 E-value=7.5e-08 Score=90.62 Aligned_cols=145 Identities=12% Similarity=0.116 Sum_probs=105.2
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccc-cccC---cchhhhhcCCCccEEE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVEC-VWGD---NGLEQIIKEDSILGVA 78 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~ell~~~~~D~V~ 78 (355)
.||+|+|+|.+|+. ++..|.+.++ ++ +.+++|++++++.+++ .. ++.. .... ++++++++. +|+|+
T Consensus 24 k~VlIiGAGgiG~a-ia~~L~~~~g-~~-V~v~~R~~~ka~~la~---~~--~~~~~~~D~~d~~~l~~~l~~--~DvVI 93 (467)
T 2axq_A 24 KNVLLLGSGFVAQP-VIDTLAANDD-IN-VTVACRTLANAQALAK---PS--GSKAISLDVTDDSALDKVLAD--NDVVI 93 (467)
T ss_dssp EEEEEECCSTTHHH-HHHHHHTSTT-EE-EEEEESSHHHHHHHHG---GG--TCEEEECCTTCHHHHHHHHHT--SSEEE
T ss_pred CEEEEECChHHHHH-HHHHHHhCCC-Ce-EEEEECCHHHHHHHHH---hc--CCcEEEEecCCHHHHHHHHcC--CCEEE
Confidence 38999999999985 8888887755 67 5788999999988765 21 2211 1101 245566664 99999
Q ss_pred EecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHHh---
Q 018445 79 VVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAEI--- 155 (355)
Q Consensus 79 I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~i--- 155 (355)
.++|...|..++.+|+++|+|++.. +....+..++.+.|+++ |+.++.+....-......++++++++
T Consensus 94 n~tp~~~~~~v~~a~l~~g~~vvd~---~~~~p~~~~Ll~~Ak~a------Gv~~i~g~G~~PG~~~~~a~~li~q~~~~ 164 (467)
T 2axq_A 94 SLIPYTFHPNVVKSAIRTKTDVVTS---SYISPALRELEPEIVKA------GITVMNEIGLDPGIDHLYAVKTIDEVHRA 164 (467)
T ss_dssp ECSCGGGHHHHHHHHHHHTCEEEEC---SCCCHHHHHHHHHHHHH------TCEEECSCBBTTBHHHHHHHHHHHHHHHT
T ss_pred ECCchhhhHHHHHHHHhcCCEEEEe---ecCCHHHHHHHHHHHHc------CCEEEecCCcCccchHHHHHHHHHHHHhc
Confidence 9999999999999999999999973 34345578899999995 88888777664333344556677665
Q ss_pred -CCeeEEEEEEe
Q 018445 156 -GDMMSVQVIVE 166 (355)
Q Consensus 156 -G~i~~v~~~~~ 166 (355)
|++.++.....
T Consensus 165 g~~~~s~~~wtG 176 (467)
T 2axq_A 165 GGKLKSFLSYCG 176 (467)
T ss_dssp TCEEEEEEEEEE
T ss_pred cCcceEEEEEec
Confidence 67777766543
No 82
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.72 E-value=4.9e-08 Score=73.86 Aligned_cols=109 Identities=14% Similarity=0.066 Sum_probs=82.5
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCcccccc-C---cchhhhhcCCCccE
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWG-D---NGLEQIIKEDSILG 76 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~ell~~~~~D~ 76 (355)
|.+||+|+|+|.+|.. .+..|.+.+. .+| .++++++++.+.+.. . ++..... . ++++++++ ++|+
T Consensus 4 ~~~~v~I~G~G~iG~~-~~~~l~~~g~-~~v-~~~~r~~~~~~~~~~----~--~~~~~~~d~~~~~~~~~~~~--~~d~ 72 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQM-IAALLKTSSN-YSV-TVADHDLAALAVLNR----M--GVATKQVDAKDEAGLAKALG--GFDA 72 (118)
T ss_dssp TCEEEEEECCSHHHHH-HHHHHHHCSS-EEE-EEEESCHHHHHHHHT----T--TCEEEECCTTCHHHHHHHTT--TCSE
T ss_pred CcCeEEEECCCHHHHH-HHHHHHhCCC-ceE-EEEeCCHHHHHHHHh----C--CCcEEEecCCCHHHHHHHHc--CCCE
Confidence 4569999999999985 7778877653 565 567999998887652 1 2111100 1 23455565 4999
Q ss_pred EEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhcc
Q 018445 77 VAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSI 123 (355)
Q Consensus 77 V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~ 123 (355)
|+.++|...+..++..++++|++++. ++.+.+..+++.++++++
T Consensus 73 vi~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~a 116 (118)
T 3ic5_A 73 VISAAPFFLTPIIAKAAKAAGAHYFD---LTEDVAATNAVRALVEDS 116 (118)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCEEEC---CCSCHHHHHHHHHHHHCC
T ss_pred EEECCCchhhHHHHHHHHHhCCCEEE---ecCcHHHHHHHHHHHHhh
Confidence 99999999999999999999999885 788999999999988874
No 83
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.68 E-value=5.7e-09 Score=93.73 Aligned_cols=102 Identities=12% Similarity=0.132 Sum_probs=77.9
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|+|||+|.+|.. |+.++....+ ++.+.+++++++++++++++..... +...+ +++++++ + .|+|++|||
T Consensus 126 ~~v~iIGaG~~a~~-~~~al~~~~~-~~~V~v~~r~~~~a~~la~~~~~~~--~~~~~--~~~~e~v-~--aDvVi~aTp 196 (322)
T 1omo_A 126 SVFGFIGCGTQAYF-QLEALRRVFD-IGEVKAYDVREKAAKKFVSYCEDRG--ISASV--QPAEEAS-R--CDVLVTTTP 196 (322)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHSC-CCEEEEECSSHHHHHHHHHHHHHTT--CCEEE--CCHHHHT-S--SSEEEECCC
T ss_pred CEEEEEcCcHHHHH-HHHHHHHhCC-ccEEEEECCCHHHHHHHHHHHHhcC--ceEEE--CCHHHHh-C--CCEEEEeeC
Confidence 58999999999985 8888887554 6778999999999999987543221 22123 7899999 5 899999999
Q ss_pred CcccHHHHHHHHHcCCeEEEecCCCCCHHHHH
Q 018445 83 GQAQVDTSLKLLKAGKHVIQEKPAAANISEIE 114 (355)
Q Consensus 83 ~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~ 114 (355)
...+. +...+++.|+||+++++...+..|+.
T Consensus 197 ~~~pv-~~~~~l~~G~~V~~ig~~~p~~~el~ 227 (322)
T 1omo_A 197 SRKPV-VKAEWVEEGTHINAIGADGPGKQELD 227 (322)
T ss_dssp CSSCC-BCGGGCCTTCEEEECSCCSTTCCCBC
T ss_pred CCCce-ecHHHcCCCeEEEECCCCCCCccccC
Confidence 86532 12467889999999988877765543
No 84
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.66 E-value=3.5e-08 Score=77.03 Aligned_cols=102 Identities=12% Similarity=0.181 Sum_probs=78.1
Q ss_pred CceEEEEec----ccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEE
Q 018445 2 APRIAILGA----GIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGV 77 (355)
Q Consensus 2 ~~rigiiG~----G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V 77 (355)
+.+|+|||+ |.+|.. ++..|.+.+ ++ +++.++... . . .+.+ .| .|++|+.+. +|+|
T Consensus 14 p~~IavIGaS~~~g~~G~~-~~~~L~~~G--~~---V~~vnp~~~-~-------i-~G~~-~~--~s~~el~~~--vDlv 73 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNI-ILKDLLSKG--FE---VLPVNPNYD-E-------I-EGLK-CY--RSVRELPKD--VDVI 73 (138)
T ss_dssp CCEEEEETCCSCTTSHHHH-HHHHHHHTT--CE---EEEECTTCS-E-------E-TTEE-CB--SSGGGSCTT--CCEE
T ss_pred CCeEEEEeecCCCCCHHHH-HHHHHHHCC--CE---EEEeCCCCC-e-------E-CCee-ec--CCHHHhCCC--CCEE
Confidence 468999999 999985 888887754 66 445555431 1 1 1554 33 899999874 9999
Q ss_pred EEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeE
Q 018445 78 AVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIW 133 (355)
Q Consensus 78 ~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~ 133 (355)
+|++|+..+.+++.+++++|...++..+-+. ++++.+.++++ |+.+
T Consensus 74 ii~vp~~~v~~v~~~~~~~g~~~i~~~~~~~----~~~l~~~a~~~------Gi~~ 119 (138)
T 1y81_A 74 VFVVPPKVGLQVAKEAVEAGFKKLWFQPGAE----SEEIRRFLEKA------GVEY 119 (138)
T ss_dssp EECSCHHHHHHHHHHHHHTTCCEEEECTTSC----CHHHHHHHHHH------TCEE
T ss_pred EEEeCHHHHHHHHHHHHHcCCCEEEEcCccH----HHHHHHHHHHC------CCEE
Confidence 9999999999999999999987777777543 68889999984 7664
No 85
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=98.64 E-value=3.4e-08 Score=87.29 Aligned_cols=106 Identities=9% Similarity=0.120 Sum_probs=82.0
Q ss_pred ceEEEEec-ccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 3 PRIAILGA-GIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 3 ~rigiiG~-G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
.|++|+|+ |++|.. |++.+.+.+ +++++-.++ .+.. +...+++. | .|++|+.++.++|+++|+|
T Consensus 14 ~~v~V~Gasg~~G~~-~~~~l~~~g--~~~V~~VnP--~~~g-------~~i~G~~v-y--~sl~el~~~~~~Dv~ii~v 78 (294)
T 2yv1_A 14 TKAIVQGITGRQGSF-HTKKMLECG--TKIVGGVTP--GKGG-------QNVHGVPV-F--DTVKEAVKETDANASVIFV 78 (294)
T ss_dssp CCEEEETTTSHHHHH-HHHHHHHTT--CCEEEEECT--TCTT-------CEETTEEE-E--SSHHHHHHHHCCCEEEECC
T ss_pred CEEEEECCCCCHHHH-HHHHHHhCC--CeEEEEeCC--CCCC-------ceECCEee-e--CCHHHHhhcCCCCEEEEcc
Confidence 58899998 889975 888888753 665554454 3310 01115553 3 8999999844599999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhcc
Q 018445 82 AGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSI 123 (355)
Q Consensus 82 p~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~ 123 (355)
|+..|.+++.+|+++|++.++..+-..+.++.++|.+.++++
T Consensus 79 p~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~ 120 (294)
T 2yv1_A 79 PAPFAKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDV 120 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHc
Confidence 999999999999999999767667677888899999999994
No 86
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=98.62 E-value=2e-08 Score=83.69 Aligned_cols=99 Identities=10% Similarity=0.194 Sum_probs=73.7
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHH-HHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEE-SAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
.||+|||+|..|.. .+..+.....+++++|++|.+++ +... ....+++. ++.+++++++++.++|.++||+
T Consensus 85 ~~V~IvGaG~lG~a-La~~~~~~~~g~~iVg~~D~dp~~kiG~------~~i~GvpV-~~~~dL~~~v~~~~Id~vIIAv 156 (212)
T 3keo_A 85 TNVMLVGCGNIGRA-LLHYRFHDRNKMQISMAFDLDSNDLVGK------TTEDGIPV-YGISTINDHLIDSDIETAILTV 156 (212)
T ss_dssp EEEEEECCSHHHHH-HTTCCCCTTSSEEEEEEEECTTSTTTTC------BCTTCCBE-EEGGGHHHHC-CCSCCEEEECS
T ss_pred CEEEEECcCHHHHH-HHHhhhcccCCeEEEEEEeCCchhccCc------eeECCeEE-eCHHHHHHHHHHcCCCEEEEec
Confidence 48999999999975 56654322334999999999998 6432 01125543 2347899999999999999999
Q ss_pred CCcccHHHHHHHHHcC-CeEEEecCCCCC
Q 018445 82 AGQAQVDTSLKLLKAG-KHVIQEKPAAAN 109 (355)
Q Consensus 82 p~~~H~~~~~~al~~G-khVl~EKP~a~~ 109 (355)
|...+.+++..++++| +.|+.=-|...+
T Consensus 157 Ps~~aq~v~d~lv~~GIk~I~nFap~~l~ 185 (212)
T 3keo_A 157 PSTEAQEVADILVKAGIKGILSFSPVHLT 185 (212)
T ss_dssp CGGGHHHHHHHHHHHTCCEEEECSSSCCC
T ss_pred CchhHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 9999999999999999 456655565544
No 87
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=98.57 E-value=1.9e-07 Score=82.60 Aligned_cols=104 Identities=16% Similarity=0.227 Sum_probs=78.3
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
.+||||||+|.||.. +...|.+.+ .+|+ ++|+++++++.+.+ . ++.. ++++++++++ .|+|++++
T Consensus 1 s~~i~iIG~G~mG~~-~a~~l~~~G--~~V~-~~dr~~~~~~~~~~----~--g~~~---~~~~~~~~~~--aDvvi~~v 65 (287)
T 3pef_A 1 SQKFGFIGLGIMGSA-MAKNLVKAG--CSVT-IWNRSPEKAEELAA----L--GAER---AATPCEVVES--CPVTFAML 65 (287)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHTT--CEEE-EECSSGGGGHHHHH----T--TCEE---CSSHHHHHHH--CSEEEECC
T ss_pred CCEEEEEeecHHHHH-HHHHHHHCC--CeEE-EEcCCHHHHHHHHH----C--CCee---cCCHHHHHhc--CCEEEEEc
Confidence 479999999999985 788887765 5664 78999999988875 2 3332 2789999987 79999999
Q ss_pred CCcccHHHHH-------HHHHcCCeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 82 AGQAQVDTSL-------KLLKAGKHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 82 p~~~H~~~~~-------~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
|+..+.+-+. ..++.|+.|+.. -+.++...+++.+..++
T Consensus 66 p~~~~~~~v~~~~~~l~~~l~~~~~vi~~--st~~~~~~~~~~~~~~~ 111 (287)
T 3pef_A 66 ADPAAAEEVCFGKHGVLEGIGEGRGYVDM--STVDPATSQRIGVAVVA 111 (287)
T ss_dssp SSHHHHHHHHHSTTCHHHHCCTTCEEEEC--SCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHcCcchHhhcCCCCCEEEeC--CCCCHHHHHHHHHHHHH
Confidence 9765554443 445566665555 47788888999888877
No 88
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=98.56 E-value=2.7e-07 Score=81.99 Aligned_cols=105 Identities=15% Similarity=0.185 Sum_probs=74.8
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEe
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
|+|||+|||+|.+|.. +...|.+.+ .+| .++|+++++.+.+.+ . ++.. ++++++++++ .|+|+++
T Consensus 4 M~m~i~iiG~G~~G~~-~a~~l~~~g--~~V-~~~~~~~~~~~~~~~----~--g~~~---~~~~~~~~~~--~D~vi~~ 68 (299)
T 1vpd_A 4 MTMKVGFIGLGIMGKP-MSKNLLKAG--YSL-VVSDRNPEAIADVIA----A--GAET---ASTAKAIAEQ--CDVIITM 68 (299)
T ss_dssp --CEEEEECCSTTHHH-HHHHHHHTT--CEE-EEECSCHHHHHHHHH----T--TCEE---CSSHHHHHHH--CSEEEEC
T ss_pred ccceEEEECchHHHHH-HHHHHHhCC--CEE-EEEeCCHHHHHHHHH----C--CCee---cCCHHHHHhC--CCEEEEE
Confidence 7789999999999985 788887654 565 688999999888765 1 3332 2789998875 8999999
Q ss_pred cCCcccHHHHH-------HHHHcCCeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 81 LAGQAQVDTSL-------KLLKAGKHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 81 tp~~~H~~~~~-------~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
+|+..|.+.+. ..++.|+. ++.. .+......++|.+...+
T Consensus 69 v~~~~~~~~~~~~~~~l~~~l~~~~~-vv~~-s~~~~~~~~~l~~~~~~ 115 (299)
T 1vpd_A 69 LPNSPHVKEVALGENGIIEGAKPGTV-LIDM-SSIAPLASREISDALKA 115 (299)
T ss_dssp CSSHHHHHHHHHSTTCHHHHCCTTCE-EEEC-SCCCHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHhCcchHhhcCCCCCE-EEEC-CCCCHHHHHHHHHHHHH
Confidence 99888766554 33445654 4665 24445566777777666
No 89
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=98.55 E-value=1.3e-07 Score=83.23 Aligned_cols=107 Identities=10% Similarity=0.146 Sum_probs=82.5
Q ss_pred CceEEEEec-ccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEe
Q 018445 2 APRIAILGA-GIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 2 ~~rigiiG~-G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
..||+|+|+ |++|+. ++..+.+.+ +++++..++.... +...+++. | .|++|+.+..++|+++|+
T Consensus 7 ~~~VaVvGasG~~G~~-~~~~l~~~g--~~~v~~VnP~~~g---------~~i~G~~v-y--~sl~el~~~~~~Dv~Ii~ 71 (288)
T 1oi7_A 7 ETRVLVQGITGREGQF-HTKQMLTYG--TKIVAGVTPGKGG---------MEVLGVPV-Y--DTVKEAVAHHEVDASIIF 71 (288)
T ss_dssp TCEEEEETTTSHHHHH-HHHHHHHHT--CEEEEEECTTCTT---------CEETTEEE-E--SSHHHHHHHSCCSEEEEC
T ss_pred CCEEEEECCCCCHHHH-HHHHHHHcC--CeEEEEECCCCCC---------ceECCEEe-e--CCHHHHhhcCCCCEEEEe
Confidence 469999998 999985 888888763 7777666665311 01115543 3 899999985569999999
Q ss_pred cCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhcc
Q 018445 81 LAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSI 123 (355)
Q Consensus 81 tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~ 123 (355)
+|+..+.+++.+|+++|++.++.-.-..+.++.++|.+.+++.
T Consensus 72 vp~~~~~~~~~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~a~~~ 114 (288)
T 1oi7_A 72 VPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKAL 114 (288)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHc
Confidence 9999999999999999998555555566778888999999994
No 90
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.54 E-value=1.2e-07 Score=74.66 Aligned_cols=102 Identities=14% Similarity=0.122 Sum_probs=76.5
Q ss_pred CceEEEEec----ccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEE
Q 018445 2 APRIAILGA----GIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGV 77 (355)
Q Consensus 2 ~~rigiiG~----G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V 77 (355)
+-+|+|||+ |.+|.. ++..|.+.+ ++ |++.++... ...+.+ .| .|++|+.+. +|+|
T Consensus 22 p~~iaVVGas~~~g~~G~~-~~~~l~~~G--~~---v~~Vnp~~~---------~i~G~~-~y--~sl~~l~~~--vDlv 81 (144)
T 2d59_A 22 YKKIALVGASPKPERDANI-VMKYLLEHG--YD---VYPVNPKYE---------EVLGRK-CY--PSVLDIPDK--IEVV 81 (144)
T ss_dssp CCEEEEETCCSCTTSHHHH-HHHHHHHTT--CE---EEEECTTCS---------EETTEE-CB--SSGGGCSSC--CSEE
T ss_pred CCEEEEEccCCCCCchHHH-HHHHHHHCC--CE---EEEECCCCC---------eECCee-cc--CCHHHcCCC--CCEE
Confidence 458999999 578875 788887754 56 556666541 112554 33 889998764 9999
Q ss_pred EEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeE
Q 018445 78 AVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIW 133 (355)
Q Consensus 78 ~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~ 133 (355)
+|++|+..+.+++.+|+++|...++-.|-+. .+++.+.++++ |+.+
T Consensus 82 vi~vp~~~~~~vv~~~~~~gi~~i~~~~g~~----~~~l~~~a~~~------Gi~v 127 (144)
T 2d59_A 82 DLFVKPKLTMEYVEQAIKKGAKVVWFQYNTY----NREASKKADEA------GLII 127 (144)
T ss_dssp EECSCHHHHHHHHHHHHHHTCSEEEECTTCC----CHHHHHHHHHT------TCEE
T ss_pred EEEeCHHHHHHHHHHHHHcCCCEEEECCCch----HHHHHHHHHHc------CCEE
Confidence 9999999999999999999977667665443 67889999994 7764
No 91
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.46 E-value=6.9e-08 Score=87.46 Aligned_cols=104 Identities=11% Similarity=0.116 Sum_probs=77.4
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|+|||+|.+|.. |+.++....+ ++-+.+|+++++++++++++.... +++.... ++++++++++ .|+|++|||
T Consensus 130 ~~v~iIGaG~~a~~-~a~al~~~~~-~~~V~V~~r~~~~a~~la~~~~~~-~g~~~~~-~~~~~eav~~--aDiVi~aTp 203 (350)
T 1x7d_A 130 RKMALIGNGAQSEF-QALAFHKHLG-IEEIVAYDTDPLATAKLIANLKEY-SGLTIRR-ASSVAEAVKG--VDIITTVTA 203 (350)
T ss_dssp CEEEEECCSTTHHH-HHHHHHHHSC-CCEEEEECSSHHHHHHHHHHHTTC-TTCEEEE-CSSHHHHHTT--CSEEEECCC
T ss_pred CeEEEECCcHHHHH-HHHHHHHhCC-CcEEEEEcCCHHHHHHHHHHHHhc-cCceEEE-eCCHHHHHhc--CCEEEEecc
Confidence 48999999999985 8888765444 567799999999999998754221 2322111 2789999976 899999999
Q ss_pred CcccHHHH-HHHHHcCCeEEEecCCCCCHHH
Q 018445 83 GQAQVDTS-LKLLKAGKHVIQEKPAAANISE 112 (355)
Q Consensus 83 ~~~H~~~~-~~al~~GkhVl~EKP~a~~~~e 112 (355)
...|.+++ ..+++.|+||.+....+....|
T Consensus 204 s~~~~pvl~~~~l~~G~~V~~vgs~~p~~~E 234 (350)
T 1x7d_A 204 DKAYATIITPDMLEPGMHLNAVGGDCPGKTE 234 (350)
T ss_dssp CSSEEEEECGGGCCTTCEEEECSCCBTTBEE
T ss_pred CCCCCceecHHHcCCCCEEEECCCCCCCcee
Confidence 98654443 3678899999999876655444
No 92
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=98.46 E-value=1.8e-07 Score=81.75 Aligned_cols=80 Identities=23% Similarity=0.270 Sum_probs=63.3
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
|||||||+|.+|.. +...+.+.+ .+++.++|+++++++.+.+ ++ ++.. ++++++++++ .|+|++++|
T Consensus 11 m~i~iiG~G~mG~~-~a~~l~~~g--~~~v~~~~~~~~~~~~~~~---~~--g~~~---~~~~~~~~~~--~Dvvi~av~ 77 (266)
T 3d1l_A 11 TPIVLIGAGNLATN-LAKALYRKG--FRIVQVYSRTEESARELAQ---KV--EAEY---TTDLAEVNPY--AKLYIVSLK 77 (266)
T ss_dssp CCEEEECCSHHHHH-HHHHHHHHT--CCEEEEECSSHHHHHHHHH---HT--TCEE---ESCGGGSCSC--CSEEEECCC
T ss_pred CeEEEEcCCHHHHH-HHHHHHHCC--CeEEEEEeCCHHHHHHHHH---Hc--CCce---eCCHHHHhcC--CCEEEEecC
Confidence 69999999999985 788887664 5678999999999988776 22 3332 2788888874 899999999
Q ss_pred CcccHHHHHHHHH
Q 018445 83 GQAQVDTSLKLLK 95 (355)
Q Consensus 83 ~~~H~~~~~~al~ 95 (355)
+..|.+++..+.+
T Consensus 78 ~~~~~~v~~~l~~ 90 (266)
T 3d1l_A 78 DSAFAELLQGIVE 90 (266)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 9988888776544
No 93
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.45 E-value=6.4e-08 Score=76.27 Aligned_cols=104 Identities=15% Similarity=0.083 Sum_probs=75.8
Q ss_pred CceEEEEec----ccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEE
Q 018445 2 APRIAILGA----GIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGV 77 (355)
Q Consensus 2 ~~rigiiG~----G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V 77 (355)
+-+|+|||+ |.+|.. ++..|.+.+ ++ |++.++.+.- +...+.+ .| .|++|+.+. +|+|
T Consensus 13 p~~IavIGas~~~g~~G~~-~~~~L~~~G--~~---v~~vnp~~~g-------~~i~G~~-~~--~sl~el~~~--~Dlv 74 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYR-VMKYLLDQG--YH---VIPVSPKVAG-------KTLLGQQ-GY--ATLADVPEK--VDMV 74 (145)
T ss_dssp CCCEEEESCCSCTTSHHHH-HHHHHHHHT--CC---EEEECSSSTT-------SEETTEE-CC--SSTTTCSSC--CSEE
T ss_pred CCEEEEECcCCCCCChHHH-HHHHHHHCC--CE---EEEeCCcccc-------cccCCee-cc--CCHHHcCCC--CCEE
Confidence 458999999 788875 788887665 55 4455554420 0111554 33 889998764 9999
Q ss_pred EEecCCcccHHHHHHHHHcC-CeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEE
Q 018445 78 AVVLAGQAQVDTSLKLLKAG-KHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWA 134 (355)
Q Consensus 78 ~I~tp~~~H~~~~~~al~~G-khVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~ 134 (355)
+|++|+..+.+++.+++++| +.|+++. -+. .+++.+.++++ |+.+.
T Consensus 75 ii~vp~~~v~~v~~~~~~~g~~~i~i~~-~~~----~~~l~~~a~~~------Gi~~i 121 (145)
T 2duw_A 75 DVFRNSEAAWGVAQEAIAIGAKTLWLQL-GVI----NEQAAVLAREA------GLSVV 121 (145)
T ss_dssp ECCSCSTHHHHHHHHHHHHTCCEEECCT-TCC----CHHHHHHHHTT------TCEEE
T ss_pred EEEeCHHHHHHHHHHHHHcCCCEEEEcC-ChH----HHHHHHHHHHc------CCEEE
Confidence 99999999999999999999 8899983 222 68889999994 76654
No 94
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=98.44 E-value=7.1e-07 Score=79.34 Aligned_cols=104 Identities=13% Similarity=0.164 Sum_probs=74.7
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
++||+|||+|.||.. +...|.+.+ .+| .++|+++++++.+.+ . ++.. ++++++++++ .|+|++++
T Consensus 4 ~~~i~iiG~G~~G~~-~a~~l~~~g--~~V-~~~~~~~~~~~~~~~----~--g~~~---~~~~~~~~~~--~D~vi~~v 68 (301)
T 3cky_A 4 SIKIGFIGLGAMGKP-MAINLLKEG--VTV-YAFDLMEANVAAVVA----Q--GAQA---CENNQKVAAA--SDIIFTSL 68 (301)
T ss_dssp CCEEEEECCCTTHHH-HHHHHHHTT--CEE-EEECSSHHHHHHHHT----T--TCEE---CSSHHHHHHH--CSEEEECC
T ss_pred CCEEEEECccHHHHH-HHHHHHHCC--CeE-EEEeCCHHHHHHHHH----C--CCee---cCCHHHHHhC--CCEEEEEC
Confidence 479999999999985 788887654 566 478999999887764 2 3332 2789998875 89999999
Q ss_pred CCcccHHHHH-------HHHHcCCeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 82 AGQAQVDTSL-------KLLKAGKHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 82 p~~~H~~~~~-------~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
|...|.+.+. ..++.|+.|+.-- +..+...++|.+...+
T Consensus 69 p~~~~~~~v~~~~~~l~~~l~~~~~vv~~~--~~~~~~~~~l~~~~~~ 114 (301)
T 3cky_A 69 PNAGIVETVMNGPGGVLSACKAGTVIVDMS--SVSPSSTLKMAKVAAE 114 (301)
T ss_dssp SSHHHHHHHHHSTTCHHHHSCTTCEEEECC--CCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHcCcchHhhcCCCCCEEEECC--CCCHHHHHHHHHHHHH
Confidence 9988876555 2344566555432 3444566777777666
No 95
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=98.43 E-value=1.7e-07 Score=84.96 Aligned_cols=93 Identities=17% Similarity=0.195 Sum_probs=65.2
Q ss_pred CceEEEEe-cccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCC----------ccccccCcchhhhhc
Q 018445 2 APRIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFAD----------VECVWGDNGLEQIIK 70 (355)
Q Consensus 2 ~~rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~ell~ 70 (355)
.+||||+| +|.+|+. +++.|.+++. ++|+++++.+....+.+.+. + +. ....+...+.+++
T Consensus 4 ~~kV~IiGAtG~iG~~-llr~L~~~p~-~elvai~~s~~~~g~~~~~~---~-~~~~~~~~~~~~~~~~~~~~d~~~~-- 75 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQK-MVKMLAKHPY-LELVKVSASPSKIGKKYKDA---V-KWIEQGDIPEEVQDLPIVSTNYEDH-- 75 (350)
T ss_dssp CEEEEEESCSSHHHHH-HHHHHTTCSS-EEEEEEECCGGGTTSBHHHH---C-CCCSSSSCCHHHHTCBEECSSGGGG--
T ss_pred CcEEEEECcCCHHHHH-HHHHHHhCCC-cEEEEEecChhhcCCCHHHh---c-CcccccccccCCceeEEeeCCHHHh--
Confidence 47999999 8999986 8998888876 99999984332332323221 1 11 1111100133443
Q ss_pred CCCccEEEEecCCcccHHHHHHHHHcCCeEEEe
Q 018445 71 EDSILGVAVVLAGQAQVDTSLKLLKAGKHVIQE 103 (355)
Q Consensus 71 ~~~~D~V~I~tp~~~H~~~~~~al~~GkhVl~E 103 (355)
.++|+|+.|||+..|.+++.+++++|++|+.=
T Consensus 76 -~~vDvVf~atp~~~s~~~a~~~~~aG~~VId~ 107 (350)
T 2ep5_A 76 -KDVDVVLSALPNELAESIELELVKNGKIVVSN 107 (350)
T ss_dssp -TTCSEEEECCCHHHHHHHHHHHHHTTCEEEEC
T ss_pred -cCCCEEEECCChHHHHHHHHHHHHCCCEEEEC
Confidence 36999999999999999999999999997763
No 96
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.43 E-value=1.1e-07 Score=74.91 Aligned_cols=87 Identities=18% Similarity=0.222 Sum_probs=63.7
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
..||+|||+|.+|.. ++..|...+ ++ +.++++++++++.+++. + +.... .++++++++++ .|+|+.+|
T Consensus 21 ~~~v~iiG~G~iG~~-~a~~l~~~g--~~-v~v~~r~~~~~~~~a~~---~--~~~~~-~~~~~~~~~~~--~Divi~at 88 (144)
T 3oj0_A 21 GNKILLVGNGMLASE-IAPYFSYPQ--YK-VTVAGRNIDHVRAFAEK---Y--EYEYV-LINDIDSLIKN--NDVIITAT 88 (144)
T ss_dssp CCEEEEECCSHHHHH-HGGGCCTTT--CE-EEEEESCHHHHHHHHHH---H--TCEEE-ECSCHHHHHHT--CSEEEECS
T ss_pred CCEEEEECCCHHHHH-HHHHHHhCC--CE-EEEEcCCHHHHHHHHHH---h--CCceE-eecCHHHHhcC--CCEEEEeC
Confidence 358999999999985 888887743 78 78999999999988763 3 22211 12788888876 89999999
Q ss_pred CCcccHHHHHHHHHcCCeEE
Q 018445 82 AGQAQVDTSLKLLKAGKHVI 101 (355)
Q Consensus 82 p~~~H~~~~~~al~~GkhVl 101 (355)
|.... .+....++.|++|+
T Consensus 89 ~~~~~-~~~~~~l~~g~~vi 107 (144)
T 3oj0_A 89 SSKTP-IVEERSLMPGKLFI 107 (144)
T ss_dssp CCSSC-SBCGGGCCTTCEEE
T ss_pred CCCCc-EeeHHHcCCCCEEE
Confidence 98733 23335666676654
No 97
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=98.42 E-value=4.1e-08 Score=86.33 Aligned_cols=79 Identities=20% Similarity=0.200 Sum_probs=55.0
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEe
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
|.|||||||+|.||.. +...|.+. .+|+.++|+++++++.+.+ +. +. . ++++++++++ .|+|+++
T Consensus 1 M~m~I~iIG~G~mG~~-la~~l~~~---~~v~~v~~~~~~~~~~~~~---~~--g~--~--~~~~~~~~~~--~DvVila 65 (276)
T 2i76_A 1 MSLVLNFVGTGTLTRF-FLECLKDR---YEIGYILSRSIDRARNLAE---VY--GG--K--AATLEKHPEL--NGVVFVI 65 (276)
T ss_dssp ---CCEEESCCHHHHH-HHHTTC-------CCCEECSSHHHHHHHHH---HT--CC--C--CCSSCCCCC-----CEEEC
T ss_pred CCceEEEEeCCHHHHH-HHHHHHHc---CcEEEEEeCCHHHHHHHHH---Hc--CC--c--cCCHHHHHhc--CCEEEEe
Confidence 7789999999999975 77777654 5777899999999988765 22 22 2 2788888765 8999999
Q ss_pred cCCcccHHHHHHHH
Q 018445 81 LAGQAQVDTSLKLL 94 (355)
Q Consensus 81 tp~~~H~~~~~~al 94 (355)
+|+..+.+++....
T Consensus 66 v~~~~~~~v~~~l~ 79 (276)
T 2i76_A 66 VPDRYIKTVANHLN 79 (276)
T ss_dssp SCTTTHHHHHTTTC
T ss_pred CChHHHHHHHHHhc
Confidence 99999888876543
No 98
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=98.41 E-value=6.8e-07 Score=79.03 Aligned_cols=106 Identities=11% Similarity=0.118 Sum_probs=77.8
Q ss_pred CceEEEEec-ccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCC-ccEEEE
Q 018445 2 APRIAILGA-GIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDS-ILGVAV 79 (355)
Q Consensus 2 ~~rigiiG~-G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~-~D~V~I 79 (355)
..|++|+|+ |++|.. ++..+.+.+ +++++-.++.... + + ..+++. | +|++|+.+... +|+++|
T Consensus 13 ~~~vvV~Gasg~~G~~-~~~~l~~~g--~~~v~~VnP~~~g-~-------~-i~G~~v-y--~sl~el~~~~~~~DvaIi 77 (297)
T 2yv2_A 13 ETRVLVQGITGREGSF-HAKAMLEYG--TKVVAGVTPGKGG-S-------E-VHGVPV-Y--DSVKEALAEHPEINTSIV 77 (297)
T ss_dssp TCEEEEETTTSHHHHH-HHHHHHHHT--CEEEEEECTTCTT-C-------E-ETTEEE-E--SSHHHHHHHCTTCCEEEE
T ss_pred CCEEEEECCCCCHHHH-HHHHHHhCC--CcEEEEeCCCCCC-c-------e-ECCEee-e--CCHHHHhhcCCCCCEEEE
Confidence 358889998 888875 888888763 6766555544210 1 1 115553 3 89999987433 999999
Q ss_pred ecCCcccHHHHHHHHHcCCe-EEEecCCCCCHHHHHHHHHHhhcc
Q 018445 80 VLAGQAQVDTSLKLLKAGKH-VIQEKPAAANISEIENALSRYNSI 123 (355)
Q Consensus 80 ~tp~~~H~~~~~~al~~Gkh-Vl~EKP~a~~~~e~~~l~~~a~~~ 123 (355)
++|+..+.+++.+|+++|++ +++ -.-..+.++.++|.+.++++
T Consensus 78 ~vp~~~~~~~v~ea~~~Gi~~vVi-~t~G~~~~~~~~l~~~A~~~ 121 (297)
T 2yv2_A 78 FVPAPFAPDAVYEAVDAGIRLVVV-ITEGIPVHDTMRFVNYARQK 121 (297)
T ss_dssp CCCGGGHHHHHHHHHHTTCSEEEE-CCCCCCHHHHHHHHHHHHHH
T ss_pred ecCHHHHHHHHHHHHHCCCCEEEE-ECCCCCHHHHHHHHHHHHHc
Confidence 99999999999999999988 444 22234667789999999994
No 99
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=98.41 E-value=5.5e-07 Score=79.86 Aligned_cols=103 Identities=9% Similarity=0.131 Sum_probs=77.4
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
|||||||+|.||.. +...|.+.+ .+| .++|+++++++.+.+ . ++.. ++++++++++ .|+|++++|
T Consensus 1 m~i~iiG~G~mG~~-~a~~l~~~g--~~V-~~~~~~~~~~~~~~~----~--g~~~---~~~~~~~~~~--~Dvvi~~vp 65 (296)
T 2gf2_A 1 MPVGFIGLGNMGNP-MAKNLMKHG--YPL-IIYDVFPDACKEFQD----A--GEQV---VSSPADVAEK--ADRIITMLP 65 (296)
T ss_dssp CCEEEECCSTTHHH-HHHHHHHTT--CCE-EEECSSTHHHHHHHT----T--TCEE---CSSHHHHHHH--CSEEEECCS
T ss_pred CeEEEEeccHHHHH-HHHHHHHCC--CEE-EEEeCCHHHHHHHHH----c--CCee---cCCHHHHHhc--CCEEEEeCC
Confidence 58999999999985 788887654 455 578999999887754 2 3332 2788998875 799999999
Q ss_pred CcccHHHHHHH-------HHcCCeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 83 GQAQVDTSLKL-------LKAGKHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 83 ~~~H~~~~~~a-------l~~GkhVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
...|.+.+... ++.|+ +++. .-+.++...+++.+...+
T Consensus 66 ~~~~~~~v~~~~~~~~~~l~~~~-~vv~-~s~~~~~~~~~~~~~~~~ 110 (296)
T 2gf2_A 66 TSINAIEAYSGANGILKKVKKGS-LLID-SSTIDPAVSKELAKEVEK 110 (296)
T ss_dssp SHHHHHHHHHSTTSGGGTCCTTC-EEEE-CSCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhCchhHHhcCCCCC-EEEE-CCCCCHHHHHHHHHHHHH
Confidence 88877665543 23344 7777 788899888888777665
No 100
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=98.39 E-value=2e-07 Score=84.82 Aligned_cols=99 Identities=15% Similarity=0.158 Sum_probs=66.6
Q ss_pred CCceEEEEe-cccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcC-------CccccccCcchhhhhcCC
Q 018445 1 MAPRIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFA-------DVECVWGDNGLEQIIKED 72 (355)
Q Consensus 1 m~~rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ell~~~ 72 (355)
|++||||+| +|.+|+. +++.|.+++. ++|+++++......+.+.+.. ..+. +....+...+++++++ .
T Consensus 7 M~~kV~IiGAtG~iG~~-llr~L~~~p~-~ev~~i~~s~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 82 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQR-FVQLLADHPM-FELTALAASERSAGKKYKDAC-YWFQDRDIPENIKDMVVIPTDPKHEEF-E 82 (354)
T ss_dssp CCEEEEEETTTSHHHHH-HHHHHTTCSS-EEEEEEEECTTTTTSBHHHHS-CCCCSSCCCHHHHTCBCEESCTTSGGG-T
T ss_pred ccceEEEECcCCHHHHH-HHHHHhcCCC-CEEEEEEcccccccccHHHhc-ccccccccccCceeeEEEeCCHHHHhc-C
Confidence 668999999 8999986 8888888876 999999852212222222110 0000 0000110125566555 3
Q ss_pred CccEEEEecCCcccHHHHHHHHHcCCeEEEe
Q 018445 73 SILGVAVVLAGQAQVDTSLKLLKAGKHVIQE 103 (355)
Q Consensus 73 ~~D~V~I~tp~~~H~~~~~~al~~GkhVl~E 103 (355)
++|+|+.|||...|.+++..++++|++|+.-
T Consensus 83 ~~DvV~~atp~~~~~~~a~~~~~aG~~VId~ 113 (354)
T 1ys4_A 83 DVDIVFSALPSDLAKKFEPEFAKEGKLIFSN 113 (354)
T ss_dssp TCCEEEECCCHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCCEEEECCCchHHHHHHHHHHHCCCEEEEC
Confidence 5999999999999999999999999997653
No 101
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=98.38 E-value=1.3e-06 Score=77.51 Aligned_cols=109 Identities=10% Similarity=0.086 Sum_probs=82.1
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecCC
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLAG 83 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp~ 83 (355)
|||+||+|.||.. ...+|.+.+ .+| .+||+++++++.+.+ . +.... +|+.|+.+. .|+|++|.|+
T Consensus 5 kIgfIGlG~MG~~-mA~~L~~~G--~~v-~v~dr~~~~~~~l~~----~--Ga~~a---~s~~e~~~~--~dvv~~~l~~ 69 (300)
T 3obb_A 5 QIAFIGLGHMGAP-MATNLLKAG--YLL-NVFDLVQSAVDGLVA----A--GASAA---RSARDAVQG--ADVVISMLPA 69 (300)
T ss_dssp EEEEECCSTTHHH-HHHHHHHTT--CEE-EEECSSHHHHHHHHH----T--TCEEC---SSHHHHHTT--CSEEEECCSC
T ss_pred EEEEeeehHHHHH-HHHHHHhCC--CeE-EEEcCCHHHHHHHHH----c--CCEEc---CCHHHHHhc--CCceeecCCc
Confidence 8999999999986 788888765 565 578999999998876 2 44332 899999987 8999999999
Q ss_pred cccHHHHHHH-------HHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEE
Q 018445 84 QAQVDTSLKL-------LKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAV 135 (355)
Q Consensus 84 ~~H~~~~~~a-------l~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v 135 (355)
..+.+-+... ++.| .++++-- +.+++.++++.+.+++ +|+.+.-
T Consensus 70 ~~~v~~V~~~~~g~~~~~~~g-~iiId~s-T~~p~~~~~~a~~~~~------~G~~~lD 120 (300)
T 3obb_A 70 SQHVEGLYLDDDGLLAHIAPG-TLVLECS-TIAPTSARKIHAAARE------RGLAMLD 120 (300)
T ss_dssp HHHHHHHHHSSSSSTTSCCC--CEEEECS-CCCHHHHHHHHHHHHT------TTCEEEE
T ss_pred hHHHHHHHhchhhhhhcCCCC-CEEEECC-CCCHHHHHHHHHHHHH------cCCEEEe
Confidence 8776655432 1122 3666632 7899999999999988 4665543
No 102
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=98.36 E-value=6.4e-07 Score=79.43 Aligned_cols=115 Identities=20% Similarity=0.149 Sum_probs=77.7
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEe
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
|+-|||+||+|.||.. ...+|.+.+ ++| .+||+++++.+.+.+ . +.... +|+.|+.+. .|+|+++
T Consensus 4 Ms~kIgfIGLG~MG~~-mA~~L~~~G--~~V-~v~dr~~~~~~~l~~----~--G~~~~---~s~~e~~~~--~dvvi~~ 68 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTP-IAEILLEAG--YEL-VVWNRTASKAEPLTK----L--GATVV---ENAIDAITP--GGIVFSV 68 (297)
T ss_dssp CCCEEEEECCSTTHHH-HHHHHHHTT--CEE-EEC-------CTTTT----T--TCEEC---SSGGGGCCT--TCEEEEC
T ss_pred CCCcEEEEecHHHHHH-HHHHHHHCC--CeE-EEEeCCHHHHHHHHH----c--CCeEe---CCHHHHHhc--CCceeee
Confidence 7779999999999986 788888765 576 578999999887654 2 33332 789999986 7999999
Q ss_pred cCCcccHHHH-----HHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEec
Q 018445 81 LAGQAQVDTS-----LKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAEN 138 (355)
Q Consensus 81 tp~~~H~~~~-----~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~ 138 (355)
.|+..+.+-+ ...+..|. ++++-- +.+++.++++.+.+++ +|+.+.-+-.
T Consensus 69 l~~~~~~~~v~~~~~~~~~~~~~-iiid~s-T~~p~~~~~~~~~~~~------~g~~~ldapV 123 (297)
T 4gbj_A 69 LADDAAVEELFSMELVEKLGKDG-VHVSMS-TISPETSRQLAQVHEW------YGAHYVGAPI 123 (297)
T ss_dssp CSSHHHHHHHSCHHHHHHHCTTC-EEEECS-CCCHHHHHHHHHHHHH------TTCEEEECCE
T ss_pred ccchhhHHHHHHHHHHhhcCCCe-EEEECC-CCChHHHHHHHHHHHh------cCCceecCCc
Confidence 9998765432 23333443 555543 7889999999999888 4766654433
No 103
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.34 E-value=5.7e-07 Score=76.18 Aligned_cols=91 Identities=15% Similarity=0.114 Sum_probs=64.5
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
+||+|||+|.||.. +...|.+.+ .+|+.++|+++++++.+++ ++ ++... .+..+.+++ .|+|++++|
T Consensus 24 mkI~IIG~G~mG~~-la~~l~~~g--~~V~~v~~r~~~~~~~l~~---~~--g~~~~---~~~~~~~~~--aDvVilavp 90 (220)
T 4huj_A 24 TTYAIIGAGAIGSA-LAERFTAAQ--IPAIIANSRGPASLSSVTD---RF--GASVK---AVELKDALQ--ADVVILAVP 90 (220)
T ss_dssp CCEEEEECHHHHHH-HHHHHHHTT--CCEEEECTTCGGGGHHHHH---HH--TTTEE---ECCHHHHTT--SSEEEEESC
T ss_pred CEEEEECCCHHHHH-HHHHHHhCC--CEEEEEECCCHHHHHHHHH---Hh--CCCcc---cChHHHHhc--CCEEEEeCC
Confidence 59999999999985 788887754 5787789999999998776 23 33222 334444554 899999999
Q ss_pred CcccHHHHHHHHH-cCCe-EEEecCC
Q 018445 83 GQAQVDTSLKLLK-AGKH-VIQEKPA 106 (355)
Q Consensus 83 ~~~H~~~~~~al~-~Gkh-Vl~EKP~ 106 (355)
+..+.+++.+... .|+. |-+-+|+
T Consensus 91 ~~~~~~v~~~l~~~~~~ivi~~~~g~ 116 (220)
T 4huj_A 91 YDSIADIVTQVSDWGGQIVVDASNAI 116 (220)
T ss_dssp GGGHHHHHTTCSCCTTCEEEECCCCB
T ss_pred hHHHHHHHHHhhccCCCEEEEcCCCC
Confidence 9988888765421 2332 4445565
No 104
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=98.33 E-value=1.7e-06 Score=77.58 Aligned_cols=104 Identities=23% Similarity=0.280 Sum_probs=75.8
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
.+||||||+|.||.. ....|.+.+ .+| .++|+++++++.+.+ . ++... +++++++++ .|+|++++
T Consensus 31 ~~~I~iIG~G~mG~~-~a~~l~~~G--~~V-~~~dr~~~~~~~l~~----~--g~~~~---~~~~e~~~~--aDvVi~~v 95 (320)
T 4dll_A 31 ARKITFLGTGSMGLP-MARRLCEAG--YAL-QVWNRTPARAASLAA----L--GATIH---EQARAAARD--ADIVVSML 95 (320)
T ss_dssp CSEEEEECCTTTHHH-HHHHHHHTT--CEE-EEECSCHHHHHHHHT----T--TCEEE---SSHHHHHTT--CSEEEECC
T ss_pred CCEEEEECccHHHHH-HHHHHHhCC--CeE-EEEcCCHHHHHHHHH----C--CCEee---CCHHHHHhc--CCEEEEEC
Confidence 369999999999985 778887764 565 568999999988765 2 34322 789999986 79999999
Q ss_pred CCcccHHHHHH------HHHcCCeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 82 AGQAQVDTSLK------LLKAGKHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 82 p~~~H~~~~~~------al~~GkhVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
|+..+.+.+.. .+..|+.|+.. -+.++...+++.+..++
T Consensus 96 p~~~~~~~v~~~~~~~~~l~~~~~vi~~--st~~~~~~~~~~~~~~~ 140 (320)
T 4dll_A 96 ENGAVVQDVLFAQGVAAAMKPGSLFLDM--ASITPREARDHAARLGA 140 (320)
T ss_dssp SSHHHHHHHHTTTCHHHHCCTTCEEEEC--SCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHcchhHHhhCCCCCEEEec--CCCCHHHHHHHHHHHHH
Confidence 98766555442 23445544443 25677888888888777
No 105
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=98.33 E-value=2e-06 Score=74.91 Aligned_cols=102 Identities=14% Similarity=0.085 Sum_probs=76.8
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeC--CHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEe
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSR--SEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
|||||||+|.||.. +...|.+.+ .+|+. +|+ +++..+.+.+ . ++. +++++++++ .|+|+++
T Consensus 1 M~I~iIG~G~mG~~-la~~l~~~g--~~V~~-~~~~~~~~~~~~~~~----~--g~~-----~~~~~~~~~--aDvvi~~ 63 (264)
T 1i36_A 1 LRVGFIGFGEVAQT-LASRLRSRG--VEVVT-SLEGRSPSTIERART----V--GVT-----ETSEEDVYS--CPVVISA 63 (264)
T ss_dssp CEEEEESCSHHHHH-HHHHHHHTT--CEEEE-CCTTCCHHHHHHHHH----H--TCE-----ECCHHHHHT--SSEEEEC
T ss_pred CeEEEEechHHHHH-HHHHHHHCC--CeEEE-eCCccCHHHHHHHHH----C--CCc-----CCHHHHHhc--CCEEEEE
Confidence 58999999999985 788887654 56655 788 6677766554 2 332 467788875 8999999
Q ss_pred cCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 81 LAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 81 tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
+|+..+.+.+...+...+++++.. -+.++...++|.+...+
T Consensus 64 v~~~~~~~~~~~~~~~~~~~vi~~-s~~~~~~~~~l~~~~~~ 104 (264)
T 1i36_A 64 VTPGVALGAARRAGRHVRGIYVDI-NNISPETVRMASSLIEK 104 (264)
T ss_dssp SCGGGHHHHHHHHHTTCCSEEEEC-SCCCHHHHHHHHHHCSS
T ss_pred CCCHHHHHHHHHHHHhcCcEEEEc-cCCCHHHHHHHHHHHhh
Confidence 999998888876655444489988 57777778888887766
No 106
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=98.33 E-value=1.4e-06 Score=76.63 Aligned_cols=101 Identities=14% Similarity=0.047 Sum_probs=69.1
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
.+||||||+|.||.. +...|.+.+....-+.++|+++++++.+.+ ++ ++... ++..+++++ .|+|++++
T Consensus 3 ~~~I~iIG~G~mG~a-ia~~l~~~g~~~~~V~v~dr~~~~~~~l~~---~~--gi~~~---~~~~~~~~~--aDvVilav 71 (280)
T 3tri_A 3 TSNITFIGGGNMARN-IVVGLIANGYDPNRICVTNRSLDKLDFFKE---KC--GVHTT---QDNRQGALN--ADVVVLAV 71 (280)
T ss_dssp CSCEEEESCSHHHHH-HHHHHHHTTCCGGGEEEECSSSHHHHHHHH---TT--CCEEE---SCHHHHHSS--CSEEEECS
T ss_pred CCEEEEEcccHHHHH-HHHHHHHCCCCCCeEEEEeCCHHHHHHHHH---Hc--CCEEe---CChHHHHhc--CCeEEEEe
Confidence 479999999999985 788887654212234688999999988876 33 44322 688888876 89999999
Q ss_pred CCcccHHHHHHHHH---cCCeEEEecCCCCCHHHH
Q 018445 82 AGQAQVDTSLKLLK---AGKHVIQEKPAAANISEI 113 (355)
Q Consensus 82 p~~~H~~~~~~al~---~GkhVl~EKP~a~~~~e~ 113 (355)
|+....+++.+... .++++++-==-+.+.+..
T Consensus 72 ~p~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~~l 106 (280)
T 3tri_A 72 KPHQIKMVCEELKDILSETKILVISLAVGVTTPLI 106 (280)
T ss_dssp CGGGHHHHHHHHHHHHHTTTCEEEECCTTCCHHHH
T ss_pred CHHHHHHHHHHHHhhccCCCeEEEEecCCCCHHHH
Confidence 99877777766543 245455532223444443
No 107
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=98.32 E-value=6.9e-07 Score=77.08 Aligned_cols=103 Identities=15% Similarity=0.124 Sum_probs=69.1
Q ss_pred CCceEEEEecccccchhccchhhhcCC-eEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEE
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISD-LVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~-~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I 79 (355)
|.+||||||+|.||.. +...|.+.+. ...-+.++|+++++++.+.+ ++ ++... ++.++++++ .|+|++
T Consensus 1 M~~~i~iIG~G~mG~~-~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~---~~--g~~~~---~~~~e~~~~--aDvVil 69 (247)
T 3gt0_A 1 MDKQIGFIGCGNMGMA-MIGGMINKNIVSSNQIICSDLNTANLKNASE---KY--GLTTT---TDNNEVAKN--ADILIL 69 (247)
T ss_dssp CCCCEEEECCSHHHHH-HHHHHHHTTSSCGGGEEEECSCHHHHHHHHH---HH--CCEEC---SCHHHHHHH--CSEEEE
T ss_pred CCCeEEEECccHHHHH-HHHHHHhCCCCCCCeEEEEeCCHHHHHHHHH---Hh--CCEEe---CChHHHHHh--CCEEEE
Confidence 7889999999999985 7888876541 01124578999999988875 23 44322 788998886 899999
Q ss_pred ecCCcccHHHHHHHHH---cCCeEEEecCCCCCHHHHHH
Q 018445 80 VLAGQAQVDTSLKLLK---AGKHVIQEKPAAANISEIEN 115 (355)
Q Consensus 80 ~tp~~~H~~~~~~al~---~GkhVl~EKP~a~~~~e~~~ 115 (355)
++|+....+++..... .|+ +++----+.+.+...+
T Consensus 70 av~~~~~~~v~~~l~~~l~~~~-~vvs~~~gi~~~~l~~ 107 (247)
T 3gt0_A 70 SIKPDLYASIINEIKEIIKNDA-IIVTIAAGKSIESTEN 107 (247)
T ss_dssp CSCTTTHHHHC---CCSSCTTC-EEEECSCCSCHHHHHH
T ss_pred EeCHHHHHHHHHHHHhhcCCCC-EEEEecCCCCHHHHHH
Confidence 9988877777655432 234 4443333555554443
No 108
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=98.30 E-value=2.2e-07 Score=79.28 Aligned_cols=131 Identities=14% Similarity=0.026 Sum_probs=94.7
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
-|||+++|+|.+|+. .+.. + .++++++++ +++. +. ++.. ++|++++++ ++|+|+=|.
T Consensus 12 ~~rV~i~G~GaIG~~-v~~~----~-~leLv~v~~---~k~g-------el--gv~a---~~d~d~lla--~pD~VVe~A 68 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKK-LVEL----G-NFEKIYAYD---RISK-------DI--PGVV---RLDEFQVPS--DVSTVVECA 68 (253)
T ss_dssp CCEEEEECCSHHHHH-HHHH----S-CCSEEEEEC---SSCC-------CC--SSSE---ECSSCCCCT--TCCEEEECS
T ss_pred cceEEEECcCHHHHH-HHhc----C-CcEEEEEEe---cccc-------cc--Ccee---eCCHHHHhh--CCCEEEECC
Confidence 389999999999985 4444 2 499999999 3321 11 3322 278999995 699999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEecCCCC-CHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHHhCCeeE
Q 018445 82 AGQAQVDTSLKLLKAGKHVIQEKPAAA-NISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAEIGDMMS 160 (355)
Q Consensus 82 p~~~H~~~~~~al~~GkhVl~EKP~a~-~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~iG~i~~ 160 (355)
+...=.+++.++|++|++|++=-+.+. +.+-.++|.++|++ +|..+++..- -.|....+ .... |.|..
T Consensus 69 ~~~av~e~~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~------gg~~l~vpSG--Ai~GlD~l-~aa~--g~l~~ 137 (253)
T 1j5p_A 69 SPEAVKEYSLQILKNPVNYIIISTSAFADEVFRERFFSELKN------SPARVFFPSG--AIGGLDVL-SSIK--DFVKN 137 (253)
T ss_dssp CHHHHHHHHHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHT------CSCEEECCCT--TCCCHHHH-HHHG--GGEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHH------CCCeEEecCC--cccchhHH-HHhc--CCccE
Confidence 888777889999999999999887643 45556888888988 5777765333 33444444 3333 88888
Q ss_pred EEEEEe
Q 018445 161 VQVIVE 166 (355)
Q Consensus 161 v~~~~~ 166 (355)
+++...
T Consensus 138 V~~~t~ 143 (253)
T 1j5p_A 138 VRIETI 143 (253)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 888743
No 109
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.29 E-value=3e-07 Score=80.21 Aligned_cols=109 Identities=14% Similarity=0.065 Sum_probs=78.3
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecCC
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLAG 83 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp~ 83 (355)
||+|||+|.+|+. ++..|.+.+ .+ +.+|++++++++.+++. + +.. + ++++++ . +.|+|+++||+
T Consensus 118 ~v~iiG~G~~g~~-~a~~l~~~g--~~-v~v~~r~~~~~~~l~~~---~--~~~--~--~~~~~~-~--~~Divi~~tp~ 181 (263)
T 2d5c_A 118 PALVLGAGGAGRA-VAFALREAG--LE-VWVWNRTPQRALALAEE---F--GLR--A--VPLEKA-R--EARLLVNATRV 181 (263)
T ss_dssp CEEEECCSHHHHH-HHHHHHHTT--CC-EEEECSSHHHHHHHHHH---H--TCE--E--CCGGGG-G--GCSEEEECSST
T ss_pred eEEEECCcHHHHH-HHHHHHHCC--CE-EEEEECCHHHHHHHHHH---h--ccc--h--hhHhhc-c--CCCEEEEccCC
Confidence 7999999999985 788887764 44 57899999998888762 3 222 2 678887 4 48999999999
Q ss_pred cccHH----HHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEec
Q 018445 84 QAQVD----TSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAEN 138 (355)
Q Consensus 84 ~~H~~----~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~ 138 (355)
..|.. +...+++.|++|+ + ++.++.+. ++.+.+++ .|..++.|..
T Consensus 182 ~~~~~~~~~l~~~~l~~g~~vi-D--~~~~p~~t-~l~~~a~~------~g~~~v~g~~ 230 (263)
T 2d5c_A 182 GLEDPSASPLPAELFPEEGAAV-D--LVYRPLWT-RFLREAKA------KGLKVQTGLP 230 (263)
T ss_dssp TTTCTTCCSSCGGGSCSSSEEE-E--SCCSSSSC-HHHHHHHH------TTCEEECSHH
T ss_pred CCCCCCCCCCCHHHcCCCCEEE-E--eecCCccc-HHHHHHHH------CcCEEECcHH
Confidence 98742 2245567787665 5 44444444 47788888 4887776643
No 110
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=98.29 E-value=2.6e-06 Score=75.87 Aligned_cols=104 Identities=13% Similarity=0.125 Sum_probs=73.8
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
.+||||||+|.||.. +...|.+.+ .+| .++|+++++++.+.+. ++.. .+++++++++ .|+|++++
T Consensus 9 ~~~IgiIG~G~mG~~-~A~~l~~~G--~~V-~~~dr~~~~~~~~~~~------g~~~---~~~~~e~~~~--aDvVi~~v 73 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTI-MAQVLLKQG--KRV-AIWNRSPGKAAALVAA------GAHL---CESVKAALSA--SPATIFVL 73 (306)
T ss_dssp SCSEEEECCSHHHHH-HHHHHHHTT--CCE-EEECSSHHHHHHHHHH------TCEE---CSSHHHHHHH--SSEEEECC
T ss_pred CCeEEEECCCHHHHH-HHHHHHHCC--CEE-EEEeCCHHHHHHHHHC------CCee---cCCHHHHHhc--CCEEEEEe
Confidence 368999999999986 788887765 455 4679999999887752 3332 2789999987 79999999
Q ss_pred CCcccHHHHHH-----HHHcCCeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 82 AGQAQVDTSLK-----LLKAGKHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 82 p~~~H~~~~~~-----al~~GkhVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
|+..+.+-+.. .+..|+-| +.. -+.++..++++.+..++
T Consensus 74 p~~~~~~~v~~~~~l~~~~~g~iv-id~-st~~~~~~~~l~~~~~~ 117 (306)
T 3l6d_A 74 LDNHATHEVLGMPGVARALAHRTI-VDY-TTNAQDEGLALQGLVNQ 117 (306)
T ss_dssp SSHHHHHHHHTSTTHHHHTTTCEE-EEC-CCCCTTHHHHHHHHHHH
T ss_pred CCHHHHHHHhcccchhhccCCCEE-EEC-CCCCHHHHHHHHHHHHH
Confidence 98876544332 23445444 433 35666777777777666
No 111
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=98.29 E-value=2.4e-06 Score=75.72 Aligned_cols=104 Identities=13% Similarity=0.134 Sum_probs=75.0
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
.+||||||+|.||.. +...|.+.+ .+| .++|+++++.+.+.+ . ++.. ++|++++++ .|+|++++
T Consensus 15 ~~~I~vIG~G~mG~~-~A~~l~~~G--~~V-~~~dr~~~~~~~~~~----~--g~~~---~~~~~~~~~---aDvvi~~v 78 (296)
T 3qha_A 15 QLKLGYIGLGNMGAP-MATRMTEWP--GGV-TVYDIRIEAMTPLAE----A--GATL---ADSVADVAA---ADLIHITV 78 (296)
T ss_dssp CCCEEEECCSTTHHH-HHHHHTTST--TCE-EEECSSTTTSHHHHH----T--TCEE---CSSHHHHTT---SSEEEECC
T ss_pred CCeEEEECcCHHHHH-HHHHHHHCC--CeE-EEEeCCHHHHHHHHH----C--CCEE---cCCHHHHHh---CCEEEEEC
Confidence 569999999999985 777887765 455 567999999888765 2 3432 278999987 79999999
Q ss_pred CCcccHHHHHHHHHcC---CeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 82 AGQAQVDTSLKLLKAG---KHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 82 p~~~H~~~~~~al~~G---khVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
|+..+.+-+...+... ..+++.. -+..+...+++.+..++
T Consensus 79 p~~~~~~~v~~~l~~~l~~g~ivv~~-st~~~~~~~~~~~~~~~ 121 (296)
T 3qha_A 79 LDDAQVREVVGELAGHAKPGTVIAIH-STISDTTAVELARDLKA 121 (296)
T ss_dssp SSHHHHHHHHHHHHTTCCTTCEEEEC-SCCCHHHHHHHHHHHGG
T ss_pred CChHHHHHHHHHHHHhcCCCCEEEEe-CCCCHHHHHHHHHHHHH
Confidence 9877655433333332 2355555 26677888888888777
No 112
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=98.28 E-value=5.6e-06 Score=74.07 Aligned_cols=109 Identities=14% Similarity=0.007 Sum_probs=76.3
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCH---HHHHHHHHHHhhhcCCccccccCc-chhhhhcCCCccE
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSE---ESAKSAAEVARKHFADVECVWGDN-GLEQIIKEDSILG 76 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~ell~~~~~D~ 76 (355)
|.+||||||+|.||.. ....|.+.+. .+| .++|+++ ++++...+.+.+. ++ . + ++++++++ .|+
T Consensus 23 M~m~IgvIG~G~mG~~-lA~~L~~~G~-~~V-~~~dr~~~~~~~~~~~~~~~~~~--g~---~--~~s~~e~~~~--aDv 90 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQS-IAGGLGGRNA-ARL-AAYDLRFNDPAASGALRARAAEL--GV---E--PLDDVAGIAC--ADV 90 (317)
T ss_dssp SCCEEEEECCSHHHHH-HHHHHHTTTC-SEE-EEECGGGGCTTTHHHHHHHHHHT--TC---E--EESSGGGGGG--CSE
T ss_pred cCCeEEEECccHHHHH-HHHHHHHcCC-CeE-EEEeCCCccccchHHHHHHHHHC--CC---C--CCCHHHHHhc--CCE
Confidence 6789999999999985 7777877651 355 4789987 2333333222222 33 2 6 88999886 799
Q ss_pred EEEecCCcccHHHHHHHHHcC--CeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 77 VAVVLAGQAQVDTSLKLLKAG--KHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 77 V~I~tp~~~H~~~~~~al~~G--khVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
|++++|+....+.+...+..- ..+++..- +.++...+++.+..++
T Consensus 91 Vi~avp~~~~~~~~~~i~~~l~~~~ivv~~s-t~~p~~~~~~~~~l~~ 137 (317)
T 4ezb_A 91 VLSLVVGAATKAVAASAAPHLSDEAVFIDLN-SVGPDTKALAAGAIAT 137 (317)
T ss_dssp EEECCCGGGHHHHHHHHGGGCCTTCEEEECC-SCCHHHHHHHHHHHHT
T ss_pred EEEecCCHHHHHHHHHHHhhcCCCCEEEECC-CCCHHHHHHHHHHHHH
Confidence 999999999888876554432 24666654 6778888888887776
No 113
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=98.28 E-value=2.5e-06 Score=75.87 Aligned_cols=105 Identities=11% Similarity=0.118 Sum_probs=74.4
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
.+||||||+|.||.. ....|.+.+ .+| .++|+++++++.+.+ . +..... ++++|++++ .|+|++++
T Consensus 7 ~~~I~iIG~G~mG~~-~a~~l~~~G--~~V-~~~dr~~~~~~~~~~----~--g~~~~~--~~~~e~~~~--aDvvi~~v 72 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMG-AARSCLRAG--LST-WGADLNPQACANLLA----E--GACGAA--ASAREFAGV--VDALVILV 72 (303)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHTT--CEE-EEECSCHHHHHHHHH----T--TCSEEE--SSSTTTTTT--CSEEEECC
T ss_pred CCeEEEECCCHHHHH-HHHHHHHCC--CeE-EEEECCHHHHHHHHH----c--CCcccc--CCHHHHHhc--CCEEEEEC
Confidence 579999999999985 778887764 465 567999999988775 2 332212 788998886 79999999
Q ss_pred CCcccHHHHH-------HHHHcCCeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 82 AGQAQVDTSL-------KLLKAGKHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 82 p~~~H~~~~~-------~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
|+..+.+.+. ..++.|+.| +.. -+..+...+++.+..++
T Consensus 73 p~~~~~~~v~~~~~~l~~~l~~g~iv-v~~-st~~~~~~~~~~~~~~~ 118 (303)
T 3g0o_A 73 VNAAQVRQVLFGEDGVAHLMKPGSAV-MVS-STISSADAQEIAAALTA 118 (303)
T ss_dssp SSHHHHHHHHC--CCCGGGSCTTCEE-EEC-SCCCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHhChhhHHhhCCCCCEE-Eec-CCCCHHHHHHHHHHHHH
Confidence 9976655543 223344444 443 24667777888777766
No 114
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=98.27 E-value=1.6e-06 Score=76.78 Aligned_cols=105 Identities=9% Similarity=-0.004 Sum_probs=81.3
Q ss_pred ceEEEE-ec-ccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEe
Q 018445 3 PRIAIL-GA-GIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 3 ~rigii-G~-G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
-+++|| |+ |..|.. |+..+.+.+ +++++-+++.... + ...+++. | .+++|+.+...+|+++|+
T Consensus 14 ~siaVV~Gasg~~G~~-~~~~l~~~G--~~~v~~VnP~~~g-~--------~i~G~~v-y--~sl~el~~~~~vD~avI~ 78 (305)
T 2fp4_A 14 NTKVICQGFTGKQGTF-HSQQALEYG--TNLVGGTTPGKGG-K--------THLGLPV-F--NTVKEAKEQTGATASVIY 78 (305)
T ss_dssp TCEEEEETTTSHHHHH-HHHHHHHHT--CEEEEEECTTCTT-C--------EETTEEE-E--SSHHHHHHHHCCCEEEEC
T ss_pred CcEEEEECCCCCHHHH-HHHHHHHCC--CcEEEEeCCCcCc-c--------eECCeee-e--chHHHhhhcCCCCEEEEe
Confidence 368888 98 888875 888888765 6765555554211 0 1125553 3 899999984459999999
Q ss_pred cCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 81 LAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 81 tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
+|+..+.+++.+|+++|.+.++...-..+.++..++.+.+++
T Consensus 79 vP~~~~~~~~~e~i~~Gi~~iv~~t~G~~~~~~~~l~~~a~~ 120 (305)
T 2fp4_A 79 VPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLR 120 (305)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHh
Confidence 999999999999999999888777777788888899999999
No 115
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=98.25 E-value=2.7e-06 Score=79.80 Aligned_cols=114 Identities=11% Similarity=0.104 Sum_probs=69.7
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHh-hhcCCcc----------ccccCcchhhhh
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVAR-KHFADVE----------CVWGDNGLEQII 69 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~-~~~~~~~----------~~~~~~~~~ell 69 (355)
|+|||+|||+|.+|.. ....|.+.+ .+|+ ++|+++++.+.+.+... .+.|+.. ....++|+++.+
T Consensus 1 M~mkI~VIG~G~vG~~-lA~~La~~G--~~V~-~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~ 76 (450)
T 3gg2_A 1 MSLDIAVVGIGYVGLV-SATCFAELG--ANVR-CIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAV 76 (450)
T ss_dssp -CCEEEEECCSHHHHH-HHHHHHHTT--CEEE-EECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHG
T ss_pred CCCEEEEECcCHHHHH-HHHHHHhcC--CEEE-EEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHH
Confidence 8899999999999985 677777654 5775 77999999988765100 0011110 001127888888
Q ss_pred cCCCccEEEEecCCcc----------cHHHHHHH---HHcCCeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 70 KEDSILGVAVVLAGQA----------QVDTSLKL---LKAGKHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 70 ~~~~~D~V~I~tp~~~----------H~~~~~~a---l~~GkhVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
++ .|+|+||+|+.. -.+++... ++.|+-|+.+- +..+..++++.+..++
T Consensus 77 ~~--aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S--Tv~pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 77 PE--ADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS--TVPVGSYRLIRKAIQE 138 (450)
T ss_dssp GG--CSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS--CCCTTHHHHHHHHHHH
T ss_pred hc--CCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee--eCCCcchHHHHHHHHH
Confidence 76 799999999884 23333332 33454555554 4445555555544433
No 116
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=98.24 E-value=3.6e-06 Score=74.86 Aligned_cols=103 Identities=12% Similarity=0.137 Sum_probs=74.5
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
+||||||+|.||.. +...|.+.+ .+| .++|+++++++.+.+. ++.. ++++++++++ .|+|++++|
T Consensus 4 ~~I~iiG~G~mG~~-~a~~l~~~G--~~V-~~~d~~~~~~~~~~~~------g~~~---~~~~~~~~~~--aDvvi~~vp 68 (302)
T 2h78_A 4 KQIAFIGLGHMGAP-MATNLLKAG--YLL-NVFDLVQSAVDGLVAA------GASA---ARSARDAVQG--ADVVISMLP 68 (302)
T ss_dssp CEEEEECCSTTHHH-HHHHHHHTT--CEE-EEECSSHHHHHHHHHT------TCEE---CSSHHHHHTT--CSEEEECCS
T ss_pred CEEEEEeecHHHHH-HHHHHHhCC--CeE-EEEcCCHHHHHHHHHC------CCeE---cCCHHHHHhC--CCeEEEECC
Confidence 59999999999985 788887764 465 5679999999888762 3332 2789999986 799999999
Q ss_pred CcccHHHHHH-------HHHcCCeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 83 GQAQVDTSLK-------LLKAGKHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 83 ~~~H~~~~~~-------al~~GkhVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
...+.+.+.. .+..|+.|+ .. -+..+...+++.+..++
T Consensus 69 ~~~~~~~v~~~~~~~~~~l~~~~~vi-~~-st~~~~~~~~l~~~~~~ 113 (302)
T 2h78_A 69 ASQHVEGLYLDDDGLLAHIAPGTLVL-EC-STIAPTSARKIHAAARE 113 (302)
T ss_dssp CHHHHHHHHHSSSCGGGSSCSSCEEE-EC-SCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHcCchhHHhcCCCCcEEE-EC-CCCCHHHHHHHHHHHHH
Confidence 8877665554 233444444 33 25667777788877776
No 117
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.23 E-value=2.5e-06 Score=77.68 Aligned_cols=99 Identities=14% Similarity=0.201 Sum_probs=69.4
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCc--c------ccccCcchhhhhcCCC
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADV--E------CVWGDNGLEQIIKEDS 73 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~ell~~~~ 73 (355)
.|||+|||+|.+|.. +...|.+.+ .+| .++|+++++++.+.+......++. . .. ++++++++++
T Consensus 4 ~mki~iiG~G~~G~~-~a~~L~~~g--~~V-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-- 75 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHA-FAAYLALKG--QSV-LAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLL--TSDIGLAVKD-- 75 (359)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHTT--CEE-EEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEE--ESCHHHHHTT--
T ss_pred cCeEEEECCCHHHHH-HHHHHHhCC--CEE-EEEeCCHHHHHHHHhcCCeEEecccccccccccee--cCCHHHHHhc--
Confidence 469999999999985 777777654 465 577999999888766310000010 0 12 2688888764
Q ss_pred ccEEEEecCCcccHHHHHHH---HHcCCeEEEecCCCC
Q 018445 74 ILGVAVVLAGQAQVDTSLKL---LKAGKHVIQEKPAAA 108 (355)
Q Consensus 74 ~D~V~I~tp~~~H~~~~~~a---l~~GkhVl~EKP~a~ 108 (355)
.|+|++++|+..|.+++..+ ++.|+.|++.+-...
T Consensus 76 ~D~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~~~~~~ 113 (359)
T 1bg6_A 76 ADVILIVVPAIHHASIAANIASYISEGQLIILNPGATG 113 (359)
T ss_dssp CSEEEECSCGGGHHHHHHHHGGGCCTTCEEEESSCCSS
T ss_pred CCEEEEeCCchHHHHHHHHHHHhCCCCCEEEEcCCCch
Confidence 89999999999998888765 345777888843243
No 118
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=98.23 E-value=1.1e-06 Score=77.82 Aligned_cols=103 Identities=17% Similarity=0.133 Sum_probs=72.9
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
.|||||||+|.+|.. +...|.+.+ .+| .++| ++++++.+.+ . ++.. ++++++++++ .|+|++++
T Consensus 3 ~m~i~iiG~G~~G~~-~a~~l~~~g--~~V-~~~~-~~~~~~~~~~----~--g~~~---~~~~~~~~~~--~D~vi~~v 66 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSP-MAINLARAG--HQL-HVTT-IGPVADELLS----L--GAVN---VETARQVTEF--ADIIFIMV 66 (295)
T ss_dssp -CEEEECCCSTTHHH-HHHHHHHTT--CEE-EECC-SSCCCHHHHT----T--TCBC---CSSHHHHHHT--CSEEEECC
T ss_pred CCEEEEEccCHHHHH-HHHHHHhCC--CEE-EEEc-CHHHHHHHHH----c--CCcc---cCCHHHHHhc--CCEEEEEC
Confidence 379999999999985 788887654 576 4778 8888877654 2 3322 2789998875 89999999
Q ss_pred CCcccHHHHHH-------HHHcCCeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 82 AGQAQVDTSLK-------LLKAGKHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 82 p~~~H~~~~~~-------al~~GkhVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
|...|.+.+.. .++.|+.| +..- +.++...++|.+..++
T Consensus 67 p~~~~~~~v~~~~~~l~~~l~~~~~v-v~~s-~~~~~~~~~l~~~~~~ 112 (295)
T 1yb4_A 67 PDTPQVEDVLFGEHGCAKTSLQGKTI-VDMS-SISPIETKRFAQRVNE 112 (295)
T ss_dssp SSHHHHHHHHHSTTSSTTSCCTTEEE-EECS-CCCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHhCchhHhhcCCCCCEE-EECC-CCCHHHHHHHHHHHHH
Confidence 99988766554 23345555 4442 3455667788877766
No 119
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=98.21 E-value=4.3e-06 Score=74.97 Aligned_cols=105 Identities=21% Similarity=0.162 Sum_probs=72.9
Q ss_pred CCceEEEEecccccchhccchhhhc--CCeEEEEEEEeC-CHHHHHHHHHHHhhh--cCCc-------------c-cccc
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEI--SDLVSLKFIWSR-SEESAKSAAEVARKH--FADV-------------E-CVWG 61 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~--~~~~~vvai~d~-~~~~~~~~~~~~~~~--~~~~-------------~-~~~~ 61 (355)
|++||||+|+|.+|+. .++.|.++ ++ ++|++|.|+ +++.+..+.+.-+.+ +++. . ..+.
T Consensus 1 M~ikVgI~G~G~IGr~-v~r~l~~~~~~~-~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~ 78 (339)
T 3b1j_A 1 MTIRVAINGFGRIGRN-FLRCWFGRQNTD-LEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVC 78 (339)
T ss_dssp CCEEEEEECCSHHHHH-HHHHHHHCSCCS-EEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEEC
T ss_pred CceEEEEECCCHHHHH-HHHHHHhcCCCC-eEEEEEecCCCHHHHHHHhccccccCCCCCcEEEcCCeeeecCceEEEEe
Confidence 7889999999999986 88888877 55 999999998 555444332200001 0000 0 0111
Q ss_pred Ccchhhhh-cCCCccEEEEecCCcccHHHHHHHHHcC-CeEEEecCCC
Q 018445 62 DNGLEQII-KEDSILGVAVVLAGQAQVDTSLKLLKAG-KHVIQEKPAA 107 (355)
Q Consensus 62 ~~~~~ell-~~~~~D~V~I~tp~~~H~~~~~~al~~G-khVl~EKP~a 107 (355)
..+++++. .+.++|+|+-|||...-.+.+.+.+++| |-|++.=|-.
T Consensus 79 ~~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~~ 126 (339)
T 3b1j_A 79 DRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGK 126 (339)
T ss_dssp CSCGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCB
T ss_pred cCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCCC
Confidence 13566663 3347999999999999999999999999 6677877754
No 120
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=98.20 E-value=2.9e-06 Score=75.74 Aligned_cols=103 Identities=15% Similarity=0.198 Sum_probs=74.8
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
+||||||+|.||.. ....|.+.+ .+| .++|+++++++.+.+ . ++.. .+++++++++ .|+|++++|
T Consensus 22 ~~I~iIG~G~mG~~-~A~~l~~~G--~~V-~~~dr~~~~~~~l~~----~--g~~~---~~~~~~~~~~--aDvvi~~vp 86 (310)
T 3doj_A 22 MEVGFLGLGIMGKA-MSMNLLKNG--FKV-TVWNRTLSKCDELVE----H--GASV---CESPAEVIKK--CKYTIAMLS 86 (310)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CEE-EEECSSGGGGHHHHH----T--TCEE---CSSHHHHHHH--CSEEEECCS
T ss_pred CEEEEECccHHHHH-HHHHHHHCC--CeE-EEEeCCHHHHHHHHH----C--CCeE---cCCHHHHHHh--CCEEEEEcC
Confidence 59999999999985 788887765 465 468999999988765 2 3332 2789999986 799999999
Q ss_pred CcccHHHHH-------HHHHcCCeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 83 GQAQVDTSL-------KLLKAGKHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 83 ~~~H~~~~~-------~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
...+.+-+. ..+..|+ +++.. -+.++..++++.+..++
T Consensus 87 ~~~~~~~v~~~~~~l~~~l~~g~-~vv~~-st~~~~~~~~~~~~~~~ 131 (310)
T 3doj_A 87 DPCAALSVVFDKGGVLEQICEGK-GYIDM-STVDAETSLKINEAITG 131 (310)
T ss_dssp SHHHHHHHHHSTTCGGGGCCTTC-EEEEC-SCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhCchhhhhccCCCC-EEEEC-CCCCHHHHHHHHHHHHH
Confidence 876655443 1223344 44553 26678888888887777
No 121
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=98.20 E-value=5.6e-06 Score=73.12 Aligned_cols=84 Identities=14% Similarity=0.103 Sum_probs=61.7
Q ss_pred CC-ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCcc-ccccCcchhhhhcCCCccEEE
Q 018445 1 MA-PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVE-CVWGDNGLEQIIKEDSILGVA 78 (355)
Q Consensus 1 m~-~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ell~~~~~D~V~ 78 (355)
|. +||||||+|.||.. +...|.+.+.+.+| .++|+++++.+.+.+ . +.. .. ++++++++++ .|+|+
T Consensus 4 M~~~~I~iIG~G~mG~~-~a~~l~~~g~~~~V-~~~d~~~~~~~~~~~----~--g~~~~~--~~~~~~~~~~--aDvVi 71 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGAS-LALGIKRDHPHYKI-VGYNRSDRSRDIALE----R--GIVDEA--TADFKVFAAL--ADVII 71 (290)
T ss_dssp GCCCEEEEECCSHHHHH-HHHHHHHHCTTSEE-EEECSSHHHHHHHHH----T--TSCSEE--ESCTTTTGGG--CSEEE
T ss_pred cccceEEEEeeCHHHHH-HHHHHHhCCCCcEE-EEEcCCHHHHHHHHH----c--CCcccc--cCCHHHhhcC--CCEEE
Confidence 53 69999999999985 78888765322565 578999998887654 2 221 12 2678888875 89999
Q ss_pred EecCCcccHHHHHHHHHc
Q 018445 79 VVLAGQAQVDTSLKLLKA 96 (355)
Q Consensus 79 I~tp~~~H~~~~~~al~~ 96 (355)
+++|+..+.+++......
T Consensus 72 lavp~~~~~~v~~~l~~~ 89 (290)
T 3b1f_A 72 LAVPIKKTIDFIKILADL 89 (290)
T ss_dssp ECSCHHHHHHHHHHHHTS
T ss_pred EcCCHHHHHHHHHHHHhc
Confidence 999999988888775443
No 122
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=98.19 E-value=2.5e-06 Score=75.29 Aligned_cols=101 Identities=16% Similarity=0.153 Sum_probs=71.3
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
+||+|||+|.+|.. +...|.+ + .+| .++|+++++++.+.+. ++.. + + +++++++ .|+|++++|
T Consensus 2 ~~i~iiG~G~~G~~-~a~~l~~-g--~~V-~~~~~~~~~~~~~~~~------g~~~-~--~-~~~~~~~--~D~vi~~v~ 64 (289)
T 2cvz_A 2 EKVAFIGLGAMGYP-MAGHLAR-R--FPT-LVWNRTFEKALRHQEE------FGSE-A--V-PLERVAE--ARVIFTCLP 64 (289)
T ss_dssp CCEEEECCSTTHHH-HHHHHHT-T--SCE-EEECSSTHHHHHHHHH------HCCE-E--C-CGGGGGG--CSEEEECCS
T ss_pred CeEEEEcccHHHHH-HHHHHhC-C--CeE-EEEeCCHHHHHHHHHC------CCcc-c--C-HHHHHhC--CCEEEEeCC
Confidence 58999999999985 7888877 4 465 5789999998887652 2221 1 4 6777764 899999999
Q ss_pred CcccHHHHHHHH----HcCCeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 83 GQAQVDTSLKLL----KAGKHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 83 ~~~H~~~~~~al----~~GkhVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
+..|.+.+...+ +.|+.|+..- .......++|.+..++
T Consensus 65 ~~~~~~~v~~~l~~~l~~~~~vv~~s--~~~~~~~~~l~~~~~~ 106 (289)
T 2cvz_A 65 TTREVYEVAEALYPYLREGTYWVDAT--SGEPEASRRLAERLRE 106 (289)
T ss_dssp SHHHHHHHHHHHTTTCCTTEEEEECS--CCCHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHhhCCCCCEEEECC--CCCHHHHHHHHHHHHH
Confidence 988766544333 3456666542 4556667778877776
No 123
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=98.18 E-value=8.4e-07 Score=80.23 Aligned_cols=94 Identities=10% Similarity=0.056 Sum_probs=65.6
Q ss_pred CceEEEEe-cccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCC-ccccccCcchhhhhcCCCccEEEE
Q 018445 2 APRIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFAD-VECVWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 2 ~~rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ell~~~~~D~V~I 79 (355)
.+||||+| +|.+|+. +++.|.+++. ++|++++++.... +.+.+.. ..+.+ ....+ .++++ + .++|+|+.
T Consensus 4 ~~kV~IiGAtG~iG~~-llr~L~~~p~-~elv~v~s~~~~g-~~~~~~~-~~~~g~~~~~~--~~~~~-~--~~vDvV~~ 74 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGE-FLRLALSHPY-LEVKQVTSRRFAG-EPVHFVH-PNLRGRTNLKF--VPPEK-L--EPADILVL 74 (345)
T ss_dssp CEEEEEETTTSHHHHH-HHHHHHTCTT-EEEEEEBCSTTTT-SBGGGTC-GGGTTTCCCBC--BCGGG-C--CCCSEEEE
T ss_pred CCEEEEECCCCHHHHH-HHHHHHcCCC-cEEEEEECchhhC-chhHHhC-chhcCcccccc--cchhH-h--cCCCEEEE
Confidence 47999999 7999986 8898888876 9999999964322 2221100 00111 11111 34444 3 36999999
Q ss_pred ecCCcccHHHHHHHHHcCCeEEEec
Q 018445 80 VLAGQAQVDTSLKLLKAGKHVIQEK 104 (355)
Q Consensus 80 ~tp~~~H~~~~~~al~~GkhVl~EK 104 (355)
|+|...|.+++.+++++|++|+.=-
T Consensus 75 a~g~~~s~~~a~~~~~aG~~VId~S 99 (345)
T 2ozp_A 75 ALPHGVFAREFDRYSALAPVLVDLS 99 (345)
T ss_dssp CCCTTHHHHTHHHHHTTCSEEEECS
T ss_pred cCCcHHHHHHHHHHHHCCCEEEEcC
Confidence 9999999999999999999877643
No 124
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=98.17 E-value=1.1e-05 Score=73.34 Aligned_cols=105 Identities=10% Similarity=0.161 Sum_probs=75.9
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcC-CCccEEEEec
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKE-DSILGVAVVL 81 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~-~~~D~V~I~t 81 (355)
+||||||+|.||.. +...|.+.+ .+| .++|+++++++.+.+ . ++.. +++++|++++ +.+|+|++++
T Consensus 23 mkIgiIGlG~mG~~-~A~~L~~~G--~~V-~v~dr~~~~~~~l~~----~--g~~~---~~s~~e~~~~a~~~DvVi~~v 89 (358)
T 4e21_A 23 MQIGMIGLGRMGAD-MVRRLRKGG--HEC-VVYDLNVNAVQALER----E--GIAG---ARSIEEFCAKLVKPRVVWLMV 89 (358)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CEE-EEECSCHHHHHHHHT----T--TCBC---CSSHHHHHHHSCSSCEEEECS
T ss_pred CEEEEECchHHHHH-HHHHHHhCC--CEE-EEEeCCHHHHHHHHH----C--CCEE---eCCHHHHHhcCCCCCEEEEeC
Confidence 69999999999986 788888765 465 578999999988765 2 3332 2789999886 3569999999
Q ss_pred CCcccHHHHHHHHHcC---CeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 82 AGQAQVDTSLKLLKAG---KHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 82 p~~~H~~~~~~al~~G---khVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
|+. +.+-+...+... ..+++.. -+..+..+.++.+..++
T Consensus 90 p~~-~v~~vl~~l~~~l~~g~iiId~-st~~~~~~~~~~~~l~~ 131 (358)
T 4e21_A 90 PAA-VVDSMLQRMTPLLAANDIVIDG-GNSHYQDDIRRADQMRA 131 (358)
T ss_dssp CGG-GHHHHHHHHGGGCCTTCEEEEC-SSCCHHHHHHHHHHHHT
T ss_pred CHH-HHHHHHHHHHhhCCCCCEEEeC-CCCChHHHHHHHHHHHH
Confidence 999 555444444332 2355553 35667788888887777
No 125
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=98.16 E-value=1.1e-06 Score=68.79 Aligned_cols=90 Identities=18% Similarity=0.146 Sum_probs=68.4
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
-|+.|||+|..|.. ++..+.+.++ ++++|++|.++.... ....+++.. +.+++.+++.+..+|.|+|+.|
T Consensus 5 ~~vlIiGaG~~g~~-l~~~l~~~~g-~~vvg~~d~~~~~~g-------~~i~g~pV~-g~~~l~~~~~~~~id~viia~~ 74 (141)
T 3nkl_A 5 KKVLIYGAGSAGLQ-LANMLRQGKE-FHPIAFIDDDRKKHK-------TTMQGITIY-RPKYLERLIKKHCISTVLLAVP 74 (141)
T ss_dssp EEEEEECCSHHHHH-HHHHHHHSSS-EEEEEEECSCGGGTT-------CEETTEEEE-CGGGHHHHHHHHTCCEEEECCT
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCC-cEEEEEEECCcccCC-------CEecCeEEE-CHHHHHHHHHHCCCCEEEEeCC
Confidence 48999999999986 7888887664 999999998876421 112244322 2367888888788999999999
Q ss_pred Cccc---HHHHHHHHHcCCeEEE
Q 018445 83 GQAQ---VDTSLKLLKAGKHVIQ 102 (355)
Q Consensus 83 ~~~H---~~~~~~al~~GkhVl~ 102 (355)
...+ .+++..+.+.|..|.+
T Consensus 75 ~~~~~~~~~i~~~l~~~gv~v~~ 97 (141)
T 3nkl_A 75 SASQVQKKVIIESLAKLHVEVLT 97 (141)
T ss_dssp TSCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCeEEE
Confidence 8776 6777888888988764
No 126
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=98.14 E-value=1.3e-06 Score=79.39 Aligned_cols=94 Identities=14% Similarity=0.150 Sum_probs=64.4
Q ss_pred CceEEEEe-cccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCcc-ccccCcchhhhhcCCCccEEEE
Q 018445 2 APRIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVE-CVWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 2 ~~rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ell~~~~~D~V~I 79 (355)
++||||+| +|.+|+. +++.|.+++. +++++++++.... +.+.+.. ..+.+.. ......+ +++++ ++|+|+.
T Consensus 16 ~~kV~IiGAtG~iG~~-llr~L~~~p~-~elvai~~~~~~g-~~~~~~~-~~~~~~v~~dl~~~~-~~~~~--~vDvVf~ 88 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAE-IVRLLANHPH-FQVTLMTADRKAG-QSMESVF-PHLRAQKLPTLVSVK-DADFS--TVDAVFC 88 (359)
T ss_dssp CEEEEEECCSSHHHHH-HHHHHHTCSS-EEEEEEBCSTTTT-SCHHHHC-GGGTTSCCCCCBCGG-GCCGG--GCSEEEE
T ss_pred CcEEEEECcCCHHHHH-HHHHHHcCCC-cEEEEEeCchhcC-CCHHHhC-chhcCcccccceecc-hhHhc--CCCEEEE
Confidence 37999999 8999986 8999988876 9999999974332 2332210 0111110 0000123 44444 5999999
Q ss_pred ecCCcccHHHHHHHHHcCCeEEEe
Q 018445 80 VLAGQAQVDTSLKLLKAGKHVIQE 103 (355)
Q Consensus 80 ~tp~~~H~~~~~~al~~GkhVl~E 103 (355)
|||...|.+.+..+ ++|++|+-=
T Consensus 89 atp~~~s~~~a~~~-~aG~~VId~ 111 (359)
T 1xyg_A 89 CLPHGTTQEIIKEL-PTALKIVDL 111 (359)
T ss_dssp CCCTTTHHHHHHTS-CTTCEEEEC
T ss_pred cCCchhHHHHHHHH-hCCCEEEEC
Confidence 99999999999999 999876543
No 127
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=98.14 E-value=9.9e-06 Score=76.58 Aligned_cols=111 Identities=12% Similarity=0.246 Sum_probs=76.2
Q ss_pred CC-ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcC-CCccEEE
Q 018445 1 MA-PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKE-DSILGVA 78 (355)
Q Consensus 1 m~-~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~-~~~D~V~ 78 (355)
|+ +||||||+|.||.. +...|.+.+ .+| .++|+++++++.+.+... ..++.. ++|++++++. +++|+|+
T Consensus 3 m~~~~IgvIG~G~mG~~-lA~~L~~~G--~~V-~v~dr~~~~~~~l~~~~~--~~gi~~---~~s~~e~v~~l~~aDvVi 73 (474)
T 2iz1_A 3 MAQANFGVVGMAVMGKN-LALNVESRG--YTV-AIYNRTTSKTEEVFKEHQ--DKNLVF---TKTLEEFVGSLEKPRRIM 73 (474)
T ss_dssp CTTBSEEEECCSHHHHH-HHHHHHHTT--CCE-EEECSSHHHHHHHHHHTT--TSCEEE---CSSHHHHHHTBCSSCEEE
T ss_pred CCCCcEEEEeeHHHHHH-HHHHHHhCC--CEE-EEEcCCHHHHHHHHHhCc--CCCeEE---eCCHHHHHhhccCCCEEE
Confidence 53 69999999999986 788887764 454 688999999988876211 113322 2789999875 4589999
Q ss_pred EecCCcccHHHHHHHH----HcCCeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 79 VVLAGQAQVDTSLKLL----KAGKHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 79 I~tp~~~H~~~~~~al----~~GkhVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
+++|+..+.+-+...+ +.|+ +++.- -+....+..++.+..++
T Consensus 74 lavp~~~~v~~vl~~l~~~l~~g~-iiId~-s~~~~~~~~~l~~~l~~ 119 (474)
T 2iz1_A 74 LMVQAGAATDATIKSLLPLLDIGD-ILIDG-GNTHFPDTMRRNAELAD 119 (474)
T ss_dssp ECCCTTHHHHHHHHHHGGGCCTTC-EEEEC-SCCCHHHHHHHHHHTTT
T ss_pred EEccCchHHHHHHHHHHhhCCCCC-EEEEC-CCCCHHHHHHHHHHHHH
Confidence 9999987765554433 3355 45552 23344567777777665
No 128
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.14 E-value=9.7e-07 Score=78.88 Aligned_cols=106 Identities=16% Similarity=0.209 Sum_probs=74.0
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
..+|||||+|.+|.. ++..+.+..+ ++-+.++|+++++++.+++. ....+.. ++++++++++ .|+|+++|
T Consensus 135 ~~~igiIG~G~~g~~-~a~~l~~~~g-~~~V~v~dr~~~~~~~l~~~---~~~~~~~---~~~~~e~v~~--aDiVi~at 204 (312)
T 2i99_A 135 SEVLCILGAGVQAYS-HYEIFTEQFS-FKEVRIWNRTKENAEKFADT---VQGEVRV---CSSVQEAVAG--ADVIITVT 204 (312)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHHCC-CSEEEEECSSHHHHHHHHHH---SSSCCEE---CSSHHHHHTT--CSEEEECC
T ss_pred CcEEEEECCcHHHHH-HHHHHHHhCC-CcEEEEEcCCHHHHHHHHHH---hhCCeEE---eCCHHHHHhc--CCEEEEEe
Confidence 358999999999985 8888876533 55568999999999998762 2101322 2789999986 79999999
Q ss_pred CCcccHHHHH-HHHHcCCeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 82 AGQAQVDTSL-KLLKAGKHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 82 p~~~H~~~~~-~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
|.. + +++. ..++.|+||++-.-.... ..++.+.+.+
T Consensus 205 p~~-~-~v~~~~~l~~g~~vi~~g~~~p~---~~el~~~~~~ 241 (312)
T 2i99_A 205 LAT-E-PILFGEWVKPGAHINAVGASRPD---WRELDDELMK 241 (312)
T ss_dssp CCS-S-CCBCGGGSCTTCEEEECCCCSTT---CCSBCHHHHH
T ss_pred CCC-C-cccCHHHcCCCcEEEeCCCCCCC---ceeccHHHHh
Confidence 963 2 2222 567889999987544333 2444445555
No 129
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=98.13 E-value=4.7e-06 Score=74.82 Aligned_cols=104 Identities=21% Similarity=0.228 Sum_probs=70.5
Q ss_pred CCceEEEEecccccchhccchhhh---cCCeEEEEEEEeC-CHHHHHHHHHHHhhh--cC-------------Ccc-ccc
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAE---ISDLVSLKFIWSR-SEESAKSAAEVARKH--FA-------------DVE-CVW 60 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~---~~~~~~vvai~d~-~~~~~~~~~~~~~~~--~~-------------~~~-~~~ 60 (355)
|++||||+|+|.+|+. .++.|.+ +++ ++|++|.|+ +++.+....+.-.-+ ++ +-. ..+
T Consensus 1 M~ikVgI~G~G~iGr~-l~r~l~~~~~~~~-~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~ 78 (339)
T 2x5j_O 1 MTVRVAINGFGRIGRN-VVRALYESGRRAE-ITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVL 78 (339)
T ss_dssp -CEEEEEECCSHHHHH-HHHHHHHTSGGGT-EEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEE
T ss_pred CCeEEEEECcCHHHHH-HHHHHHcCCCCCC-EEEEEEeCCCCHHHHHHHhcccccCCCCCceEEEcCCeeEECCEEEEEE
Confidence 7899999999999986 8888887 766 999999997 545444433200000 11 000 000
Q ss_pred cCcchhhhh-cCCCccEEEEecCCcccHHHHHHHHHcC-CeEEEecCC
Q 018445 61 GDNGLEQII-KEDSILGVAVVLAGQAQVDTSLKLLKAG-KHVIQEKPA 106 (355)
Q Consensus 61 ~~~~~~ell-~~~~~D~V~I~tp~~~H~~~~~~al~~G-khVl~EKP~ 106 (355)
...+++++. .+.++|+|+-|||.....+.+.+.+++| |.|++.-|-
T Consensus 79 ~~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~a 126 (339)
T 2x5j_O 79 HERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPG 126 (339)
T ss_dssp CCSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCC
T ss_pred ecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccc
Confidence 012444442 2236999999999999999999999999 568888775
No 130
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=98.11 E-value=6e-06 Score=74.78 Aligned_cols=105 Identities=21% Similarity=0.181 Sum_probs=72.3
Q ss_pred CCceEEEEecccccchhccchhhhc--CCeEEEEEEEeC-CHHHHHHHHHHHhhh--cCC--------c-----c-cccc
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEI--SDLVSLKFIWSR-SEESAKSAAEVARKH--FAD--------V-----E-CVWG 61 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~--~~~~~vvai~d~-~~~~~~~~~~~~~~~--~~~--------~-----~-~~~~ 61 (355)
|++||||+|+|++|+. .++.|..+ ++ ++|++|.|+ +++.+..+.+.-+-+ +++ + . ..+.
T Consensus 1 M~ikVgInGfGrIGr~-vlR~l~~~~~~~-veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~~~~~~l~v~g~~i~v~~ 78 (380)
T 2d2i_A 1 MTIRVAINGFGRIGRN-FLRCWFGRQNTD-LEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVC 78 (380)
T ss_dssp CCEEEEEECCSHHHHH-HHHHHHHCSSCS-EEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEEC
T ss_pred CCcEEEEECcCHHHHH-HHHHHhcCCCCC-EEEEEEecCCCHHHHHHhhcccccCCCCCCcEEEeCCeEEECCeEEEEEe
Confidence 7889999999999986 88888776 55 999999997 555544433210001 000 0 0 0111
Q ss_pred Ccchhhhh-cCCCccEEEEecCCcccHHHHHHHHHcC-CeEEEecCCC
Q 018445 62 DNGLEQII-KEDSILGVAVVLAGQAQVDTSLKLLKAG-KHVIQEKPAA 107 (355)
Q Consensus 62 ~~~~~ell-~~~~~D~V~I~tp~~~H~~~~~~al~~G-khVl~EKP~a 107 (355)
..+++++. .+.++|+|+-||+...-.+.+.+.+++| |-|++.=|-.
T Consensus 79 ~~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps~ 126 (380)
T 2d2i_A 79 DRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGK 126 (380)
T ss_dssp CSCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCB
T ss_pred cCChHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEEcCCCC
Confidence 13555553 2236999999999999999999999999 6688877754
No 131
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=98.07 E-value=1.6e-05 Score=70.99 Aligned_cols=105 Identities=10% Similarity=0.068 Sum_probs=75.6
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCC--HHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEe
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRS--EESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
+||||||+|.||.. ....|.+.+ .+-|.++|++ +++.+.+.+ . ++... ++++|++++ .|+|+++
T Consensus 25 ~~I~iIG~G~mG~~-~A~~L~~~G--~~~V~~~dr~~~~~~~~~~~~----~--g~~~~---~~~~e~~~~--aDvVi~~ 90 (312)
T 3qsg_A 25 MKLGFIGFGEAASA-IASGLRQAG--AIDMAAYDAASAESWRPRAEE----L--GVSCK---ASVAEVAGE--CDVIFSL 90 (312)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHS--CCEEEEECSSCHHHHHHHHHH----T--TCEEC---SCHHHHHHH--CSEEEEC
T ss_pred CEEEEECccHHHHH-HHHHHHHCC--CCeEEEEcCCCCHHHHHHHHH----C--CCEEe---CCHHHHHhc--CCEEEEe
Confidence 59999999999985 788887764 4234678997 466665543 2 44322 789999886 8999999
Q ss_pred cCCcccHHHHHHHHHcC--CeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 81 LAGQAQVDTSLKLLKAG--KHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 81 tp~~~H~~~~~~al~~G--khVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
+|+..+.+++...++.- ..+++..- +..+...+++.+..++
T Consensus 91 vp~~~~~~~~~~l~~~l~~~~ivvd~s-t~~~~~~~~~~~~~~~ 133 (312)
T 3qsg_A 91 VTAQAALEVAQQAGPHLCEGALYADFT-SCSPAVKRAIGDVISR 133 (312)
T ss_dssp SCTTTHHHHHHHHGGGCCTTCEEEECC-CCCHHHHHHHHHHHHH
T ss_pred cCchhHHHHHHhhHhhcCCCCEEEEcC-CCCHHHHHHHHHHHHh
Confidence 99999988876655432 34666653 6677778877776665
No 132
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.07 E-value=1.2e-06 Score=68.53 Aligned_cols=114 Identities=13% Similarity=-0.034 Sum_probs=80.0
Q ss_pred CceEEEEec----ccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEE
Q 018445 2 APRIAILGA----GIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGV 77 (355)
Q Consensus 2 ~~rigiiG~----G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V 77 (355)
+-+|+|||+ |.+|.. ++..|.+.+ ++ +++.++.+.. +...+.+. | .|++|+-+ .+|++
T Consensus 13 p~~vaVvGas~~~g~~G~~-~~~~l~~~G--~~---v~~vnp~~~~-------~~i~G~~~-~--~sl~el~~--~vDla 74 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHY-VPRYLREQG--YR---VLPVNPRFQG-------EELFGEEA-V--ASLLDLKE--PVDIL 74 (140)
T ss_dssp CCEEEEETCCSSTTSHHHH-HHHHHHHTT--CE---EEEECGGGTT-------SEETTEEC-B--SSGGGCCS--CCSEE
T ss_pred CCEEEEECCCCCCCChHHH-HHHHHHHCC--CE---EEEeCCCccc-------CcCCCEEe-c--CCHHHCCC--CCCEE
Confidence 348999999 678875 778877654 55 6677877421 11125543 3 88888876 49999
Q ss_pred EEecCCcccHHHHHHHHHcC-CeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEE-EecccCchH
Q 018445 78 AVVLAGQAQVDTSLKLLKAG-KHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAV-AENYRFEPA 144 (355)
Q Consensus 78 ~I~tp~~~H~~~~~~al~~G-khVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v-~~~~r~~p~ 144 (355)
+|++|+....+++.+|+++| +.|++-.+.. .+++.+.++++ |..+.- +......|.
T Consensus 75 vi~vp~~~~~~v~~~~~~~gi~~i~~~~g~~-----~~~~~~~a~~~------Gir~vgpnc~g~~~~~ 132 (140)
T 1iuk_A 75 DVFRPPSALMDHLPEVLALRPGLVWLQSGIR-----HPEFEKALKEA------GIPVVADRCLMVEHKR 132 (140)
T ss_dssp EECSCHHHHTTTHHHHHHHCCSCEEECTTCC-----CHHHHHHHHHT------TCCEEESCCHHHHHHH
T ss_pred EEEeCHHHHHHHHHHHHHcCCCEEEEcCCcC-----HHHHHHHHHHc------CCEEEcCCccceEChh
Confidence 99999999999999999999 5677765543 37888999984 665432 344444443
No 133
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=98.06 E-value=0.00023 Score=63.45 Aligned_cols=208 Identities=13% Similarity=0.188 Sum_probs=137.3
Q ss_pred eEEEEe-cccccchhccchhhhcCCeEEEEEEEe--CCHHHHHHHHHHHhhhcCCcc--------------ccccCcchh
Q 018445 4 RIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWS--RSEESAKSAAEVARKHFADVE--------------CVWGDNGLE 66 (355)
Q Consensus 4 rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d--~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~ 66 (355)
||.|+| +|+||.. -+..++++|++++|+|+.. .+.+.+.+-+. ++.|... ..++.+.+.
T Consensus 23 ~i~ILGSTGSIGtq-tLdVi~~~pd~f~V~aLaa~g~nv~~L~~q~~---~f~p~~v~v~d~~~~~~~~~~v~~G~~~l~ 98 (398)
T 2y1e_A 23 RVVVLGSTGSIGTQ-ALQVIADNPDRFEVVGLAAGGAHLDTLLRQRA---QTGVTNIAVADEHAAQRVGDIPYHGSDAAT 98 (398)
T ss_dssp EEEEESTTSHHHHH-HHHHHHHCTTTEEEEEEEECSSCHHHHHHHHH---HHCCCCEEESCHHHHHHHCCCSEESTTHHH
T ss_pred EEEEEccCcHHHHH-HHHHHHhCCCceEEEEEEecCCCHHHHHHHHH---HcCCCEEEEcCHHHhhhcCCEEEecHHHHH
Confidence 699999 7999986 7999999998899999876 56666655544 4444322 222334567
Q ss_pred hhhcCCCccEEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHH-HHHHhhccCCCCCCCCeEEEEecccCchHH
Q 018445 67 QIIKEDSILGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIEN-ALSRYNSICPDPPGQPIWAVAENYRFEPAF 145 (355)
Q Consensus 67 ell~~~~~D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~-l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~ 145 (355)
++.+.+++|.|+.+..-..-...+.+|+++||.|.+-- =.++--+-+ +.+++++ ++ ++ .-+.-.
T Consensus 99 ~~a~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK~iaLAN--KEsLV~aG~lv~~~a~~------~~-il------PVDSEH 163 (398)
T 2y1e_A 99 RLVEQTEADVVLNALVGALGLRPTLAALKTGARLALAN--KESLVAGGSLVLRAARP------GQ-IV------PVDSEH 163 (398)
T ss_dssp HHHHHSCCSEEEECCCSGGGHHHHHHHHHHTCEEEECC--HHHHHHHTHHHHHHCCT------TC-EE------ECSHHH
T ss_pred HHhcCCCCCEEEEeCcCHHHHHHHHHHHHCCCceEEcc--cchheecHHHHHHHHHH------cC-ce------EecchH
Confidence 77777889999999999999999999999999988742 022222333 3455666 35 33 336666
Q ss_pred HHHHHHHHH--hCCeeEEEEEEeeccCCCCC------------ccCcccccc----ccCccccchhhHHHHHHHHHhCCc
Q 018445 146 VECKKLIAE--IGDMMSVQVIVEGSMNSSNP------------YFSSSWRRN----FTGGFILDMGVHFIAGLRMITGCE 207 (355)
Q Consensus 146 ~~~k~~i~~--iG~i~~v~~~~~~~~~~~~~------------~~~~~w~~~----~~gg~l~d~g~H~id~~~~l~G~~ 207 (355)
-.+.+.+.. ..+|..+-.+-++...+..+ -..++|.=. .+.-.|++-|.--|.. .||||-+
T Consensus 164 sAIfQ~L~g~~~~~V~kiiLTASGGPFR~~~~e~L~~vT~eqAl~HPnWsMG~KITIDSATmmNKGLEvIEA-~~LF~~~ 242 (398)
T 2y1e_A 164 SALAQCLRGGTPDEVAKLVLTASGGPFRGWSAADLEHVTPEQAGAHPTWSMGPMNTLNSASLVNKGLEVIET-HLLFGIP 242 (398)
T ss_dssp HHHHHHGGGSCGGGEEEEEEEECCCTTTTCCHHHHTTCCTTTC-------CCHHHHHHHHHSHHHHHHHHHH-HHHHCCC
T ss_pred hHHHHHhCCCCcccccEEEEECCccccCCCCHHHHhCCCHHHHhhCCCcccCceeeehhHhHhhhhHHHHHH-HHHcCCC
Confidence 667776653 44577777765543222111 012567421 2234666777777775 4999988
Q ss_pred ceeEEEeecccCCCCCCCceEEEEEEecCCc
Q 018445 208 VVSVSAITSHIDKTLPPPDNISSNFQLENGC 238 (355)
Q Consensus 208 ~~~V~a~~~~~~~~~~~~d~~~~~l~~~~G~ 238 (355)
++++....+ .....+.+++|.||.
T Consensus 243 ~d~I~VvVH-------PQSiIHSmVef~DGS 266 (398)
T 2y1e_A 243 YDRIDVVVH-------PQSIIHSMVTFIDGS 266 (398)
T ss_dssp GGGEEEEEC-------TTCCEEEEEEETTSC
T ss_pred HHHeEEEEC-------CCCceeEEEEEeCCc
Confidence 888888774 345789999999995
No 134
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=98.05 E-value=8.7e-06 Score=71.78 Aligned_cols=103 Identities=11% Similarity=0.135 Sum_probs=73.6
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
+||||||+|.||.. ....|.+.+ .+| .++|+++++++.+.+. ++... ++++|++++ .|+|++++|
T Consensus 2 ~~I~iiG~G~mG~~-~a~~l~~~G--~~V-~~~dr~~~~~~~~~~~------g~~~~---~~~~~~~~~--advvi~~v~ 66 (287)
T 3pdu_A 2 TTYGFLGLGIMGGP-MAANLVRAG--FDV-TVWNRNPAKCAPLVAL------GARQA---SSPAEVCAA--CDITIAMLA 66 (287)
T ss_dssp CCEEEECCSTTHHH-HHHHHHHHT--CCE-EEECSSGGGGHHHHHH------TCEEC---SCHHHHHHH--CSEEEECCS
T ss_pred CeEEEEccCHHHHH-HHHHHHHCC--CeE-EEEcCCHHHHHHHHHC------CCeec---CCHHHHHHc--CCEEEEEcC
Confidence 48999999999985 778887765 455 5679999999887752 33322 789999986 799999999
Q ss_pred CcccHHHHH-------HHHHcCCeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 83 GQAQVDTSL-------KLLKAGKHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 83 ~~~H~~~~~-------~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
+..+.+-+. ..++.|+ +++..- +.++...+++.+..++
T Consensus 67 ~~~~~~~v~~~~~~l~~~l~~g~-~vv~~s-t~~~~~~~~~~~~~~~ 111 (287)
T 3pdu_A 67 DPAAAREVCFGANGVLEGIGGGR-GYIDMS-TVDDETSTAIGAAVTA 111 (287)
T ss_dssp SHHHHHHHHHSTTCGGGTCCTTC-EEEECS-CCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHcCchhhhhcccCCC-EEEECC-CCCHHHHHHHHHHHHH
Confidence 976554443 1223343 445542 5667788888887776
No 135
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=98.03 E-value=1.1e-05 Score=72.30 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=71.2
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeC-CHHHHHHHHHHHhhh--cC-------------Ccccccc-Ccch
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSR-SEESAKSAAEVARKH--FA-------------DVECVWG-DNGL 65 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~-~~~~~~~~~~~~~~~--~~-------------~~~~~~~-~~~~ 65 (355)
+||||+|.|.+|+. .++.+.++++ ++|++|.|. +++.+....+.-.-+ ++ +-...+. ..+.
T Consensus 2 ikVgI~G~G~iGr~-l~R~l~~~~~-veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp 79 (334)
T 3cmc_O 2 VKVGINGFGRIGRN-VFRAALKNPD-IEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDP 79 (334)
T ss_dssp EEEEEESCSHHHHH-HHHHHTTCTT-EEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred eEEEEECCCHHHHH-HHHHHhCCCC-eEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEEccCcEEECCEEEEEEecCCh
Confidence 79999999999986 8888888876 999999997 444444433200011 00 0000110 1245
Q ss_pred hhh-hcCCCccEEEEecCCcccHHHHHHHHHcC-CeEEEecCCC
Q 018445 66 EQI-IKEDSILGVAVVLAGQAQVDTSLKLLKAG-KHVIQEKPAA 107 (355)
Q Consensus 66 ~el-l~~~~~D~V~I~tp~~~H~~~~~~al~~G-khVl~EKP~a 107 (355)
+++ ..+.++|+|+-|||.....+.+.+.+++| |.|++.=|-.
T Consensus 80 ~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~pa~ 123 (334)
T 3cmc_O 80 ENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAK 123 (334)
T ss_dssp GGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB
T ss_pred hhcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCCCc
Confidence 554 23347999999999999999999999999 6688887754
No 136
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=97.96 E-value=0.00069 Score=60.62 Aligned_cols=210 Identities=11% Similarity=0.201 Sum_probs=136.7
Q ss_pred eEEEEe-cccccchhccchhhhcCCeEEEEEEEeC-CHHHHHHHHHHHhhhcCCc-----------------------cc
Q 018445 4 RIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWSR-SEESAKSAAEVARKHFADV-----------------------EC 58 (355)
Q Consensus 4 rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d~-~~~~~~~~~~~~~~~~~~~-----------------------~~ 58 (355)
||.|+| +|+||.. -+..++++|++++|+|+..- +.+.+.+-+. ++.|.. ..
T Consensus 11 ~i~ILGSTGSIGtq-tLdVi~~~pd~f~V~aL~ag~nv~~L~~q~~---~f~p~~v~v~d~~~~~~L~~~l~~~~~~~~v 86 (406)
T 1q0q_A 11 QLTILGSTGSIGCS-TLDVVRHNPEHFRVVALVAGKNVTRMVEQCL---EFSPRYAVMDDEASAKLLKTMLQQQGSRTEV 86 (406)
T ss_dssp EEEEETTTSHHHHH-HHHHHHHCTTTEEEEEEEESSCHHHHHHHHH---HHCCSEEEESSHHHHHHHHHHHHHTTCCCEE
T ss_pred eEEEEccCcHHHHH-HHHHHHhCCCccEEEEEEcCCCHHHHHHHHH---HhCCCEEEEcCHHHHHHHHHHhhcCCCCcEE
Confidence 899999 7999986 79999999988999997653 4444443333 333332 12
Q ss_pred cccCcchhhhhcCCCccEEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHH-HHHHhhccCCCCCCCCeEEEEe
Q 018445 59 VWGDNGLEQIIKEDSILGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIEN-ALSRYNSICPDPPGQPIWAVAE 137 (355)
Q Consensus 59 ~~~~~~~~ell~~~~~D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~-l~~~a~~~~~~~~~~~~~~v~~ 137 (355)
.++.+.+.++.+.+++|.|+.+..-..=...+.+|+++||.|.+--= .++--+-+ +.++++++ +..+..
T Consensus 87 ~~G~~~l~~~a~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK~iaLANK--EsLV~aG~lv~~~a~~~------~~~ilP-- 156 (406)
T 1q0q_A 87 LSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANK--ESLVTCGRLFMDAVKQS------KAQLLP-- 156 (406)
T ss_dssp EESHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEECCH--HHHHHHTHHHHHHHHHH------TCEEEE--
T ss_pred EeCHHHHHHHhcCCCCCEEEEccccHhHHHHHHHHHHCCCeEEEech--HHHHhchHHHHHHHHHc------CCeEEE--
Confidence 22224456667777899999999999999999999999999887420 22222222 45677774 655543
Q ss_pred cccCchHHHHHHHHH----HH--------hCCeeEEEEEEeeccCCCCCc------------cCcccccc----ccCccc
Q 018445 138 NYRFEPAFVECKKLI----AE--------IGDMMSVQVIVEGSMNSSNPY------------FSSSWRRN----FTGGFI 189 (355)
Q Consensus 138 ~~r~~p~~~~~k~~i----~~--------iG~i~~v~~~~~~~~~~~~~~------------~~~~w~~~----~~gg~l 189 (355)
-+.-.-.+.+.+ .. ..+|..+-.+-++...+..+. ..++|.=. .+.-.|
T Consensus 157 ---VDSEHsAIfQ~L~~~~~g~~~~~~~~~~~V~kiiLTASGGPFR~~~~e~L~~vT~eqAl~HPnWsMG~KITIDSATm 233 (406)
T 1q0q_A 157 ---VDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATM 233 (406)
T ss_dssp ---CSHHHHHHHHTSCHHHHTTTTTSCTGGGTEEEEEEEECCCTTTTSCGGGGGGCCHHHHHCCSSCCCCHHHHHHHHHT
T ss_pred ---ecchHHHHHHHcccccCCccccccCCcccccEEEEECCCcccCCCCHHHHhCCCHHHHhcCCCccCCCeeeehHHhH
Confidence 355555555555 21 134777776654432221111 13567421 223466
Q ss_pred cchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCceEEEEEEecCCc
Q 018445 190 LDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISSNFQLENGC 238 (355)
Q Consensus 190 ~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~G~ 238 (355)
++-|.--|.. .||||-+++++....+ .....+.+++|.||.
T Consensus 234 mNKGLEvIEA-~~LF~~~~d~I~VvVH-------PQSiIHSmVef~DGS 274 (406)
T 1q0q_A 234 MNKGLEYIEA-RWLFNASASQMEVLIH-------PQSVIHSMVRYQDGS 274 (406)
T ss_dssp HHHHHHHHHH-HHHHTCCGGGEEEEEC-------TTCCEEEEEEETTSC
T ss_pred HhhhHHHHHH-HHHcCCCHHHeEEEEC-------CCCceeEEEEEcCCc
Confidence 7777777775 4999988888888774 345789999999995
No 137
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=97.95 E-value=6e-05 Score=71.26 Aligned_cols=112 Identities=10% Similarity=0.234 Sum_probs=73.3
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh--cCCccccccCcchhhhhcC-CCccEEE
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH--FADVECVWGDNGLEQIIKE-DSILGVA 78 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ell~~-~~~D~V~ 78 (355)
+|||||||+|.||.. +...|.+.+ .+| .++|+++++++.+.+..... ..++. . ++|+++++++ +++|+|+
T Consensus 1 ~MkIgVIG~G~mG~~-lA~~La~~G--~~V-~v~dr~~~~~~~l~~~~g~~~~~~~i~-~--~~~~~e~v~~l~~aDvVi 73 (478)
T 1pgj_A 1 SMDVGVVGLGVMGAN-LALNIAEKG--FKV-AVFNRTYSKSEEFMKANASAPFAGNLK-A--FETMEAFAASLKKPRKAL 73 (478)
T ss_dssp CBSEEEECCSHHHHH-HHHHHHHTT--CCE-EEECSSHHHHHHHHHHTTTSTTGGGEE-E--CSCHHHHHHHBCSSCEEE
T ss_pred CCEEEEEChHHHHHH-HHHHHHHCC--CEE-EEEeCCHHHHHHHHHhcCCCCCCCCeE-E--ECCHHHHHhcccCCCEEE
Confidence 369999999999986 788887765 454 68899999998887621000 01122 1 2789998873 3589999
Q ss_pred EecCCcccHHHHHHHH----HcCCeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 79 VVLAGQAQVDTSLKLL----KAGKHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 79 I~tp~~~H~~~~~~al----~~GkhVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
+++|+..+.+-+...+ +.|+ +++.. .+....+..++.+..++
T Consensus 74 laVp~~~~v~~vl~~l~~~l~~g~-iIId~-sng~~~~~~~l~~~l~~ 119 (478)
T 1pgj_A 74 ILVQAGAATDSTIEQLKKVFEKGD-ILVDT-GNAHFKDQGRRAQQLEA 119 (478)
T ss_dssp ECCCCSHHHHHHHHHHHHHCCTTC-EEEEC-CCCCHHHHHHHHHHHHT
T ss_pred EecCChHHHHHHHHHHHhhCCCCC-EEEEC-CCCChHHHHHHHHHHHH
Confidence 9999986655444333 3344 55553 23344556667666665
No 138
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=97.93 E-value=5.5e-05 Score=67.45 Aligned_cols=91 Identities=11% Similarity=0.038 Sum_probs=63.5
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhh-hhcCCCccEEEEe
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQ-IIKEDSILGVAVV 80 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e-ll~~~~~D~V~I~ 80 (355)
.+||||||+|.||.. ....|.+.+...+| .++|+++++++.+.+ . ++...+ ++++++ ++++ .|+|++|
T Consensus 33 ~~kI~IIG~G~mG~s-lA~~l~~~G~~~~V-~~~dr~~~~~~~a~~----~--G~~~~~-~~~~~~~~~~~--aDvVila 101 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGS-FAKSLRRSGFKGKI-YGYDINPESISKAVD----L--GIIDEG-TTSIAKVEDFS--PDFVMLS 101 (314)
T ss_dssp CSEEEEESCSHHHHH-HHHHHHHTTCCSEE-EEECSCHHHHHHHHH----T--TSCSEE-ESCTTGGGGGC--CSEEEEC
T ss_pred CCEEEEEeeCHHHHH-HHHHHHhCCCCCEE-EEEECCHHHHHHHHH----C--CCcchh-cCCHHHHhhcc--CCEEEEe
Confidence 369999999999985 78888765421155 568999998887654 2 221111 267888 7776 8999999
Q ss_pred cCCcccHHHHHHHHHc--CCeEEEe
Q 018445 81 LAGQAQVDTSLKLLKA--GKHVIQE 103 (355)
Q Consensus 81 tp~~~H~~~~~~al~~--GkhVl~E 103 (355)
+|+..-.+++...... ...+++.
T Consensus 102 vp~~~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 102 SPVRTFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp SCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred CCHHHHHHHHHHHhhccCCCcEEEE
Confidence 9999877777665442 2346666
No 139
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=97.93 E-value=5.8e-06 Score=71.84 Aligned_cols=93 Identities=13% Similarity=0.164 Sum_probs=61.1
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
|||+|||+|.||.. +...|.+.+. .+| .++|+++++++.+.+ ++ ++... +++++++ + .|+|++++|
T Consensus 1 m~i~iiG~G~mG~~-~a~~l~~~g~-~~v-~~~~r~~~~~~~~~~---~~--g~~~~---~~~~~~~-~--~D~vi~~v~ 66 (263)
T 1yqg_A 1 MNVYFLGGGNMAAA-VAGGLVKQGG-YRI-YIANRGAEKRERLEK---EL--GVETS---ATLPELH-S--DDVLILAVK 66 (263)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHCS-CEE-EEECSSHHHHHHHHH---HT--CCEEE---SSCCCCC-T--TSEEEECSC
T ss_pred CEEEEECchHHHHH-HHHHHHHCCC-CeE-EEECCCHHHHHHHHH---hc--CCEEe---CCHHHHh-c--CCEEEEEeC
Confidence 58999999999985 7888876551 244 678999999988775 23 34322 6777777 4 899999999
Q ss_pred CcccHHHHHHHHHcCCeEEEecCCCCCH
Q 018445 83 GQAQVDTSLKLLKAGKHVIQEKPAAANI 110 (355)
Q Consensus 83 ~~~H~~~~~~al~~GkhVl~EKP~a~~~ 110 (355)
+....+++.. +.....+++.---+.+.
T Consensus 67 ~~~~~~v~~~-l~~~~~ivv~~~~g~~~ 93 (263)
T 1yqg_A 67 PQDMEAACKN-IRTNGALVLSVAAGLSV 93 (263)
T ss_dssp HHHHHHHHTT-CCCTTCEEEECCTTCCH
T ss_pred chhHHHHHHH-hccCCCEEEEecCCCCH
Confidence 5544444432 22113455554334444
No 140
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=97.92 E-value=3.3e-05 Score=73.17 Aligned_cols=110 Identities=13% Similarity=0.222 Sum_probs=72.6
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHH-HHhhhcCCccccccCcchhhhhcC-CCccEEEE
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAE-VARKHFADVECVWGDNGLEQIIKE-DSILGVAV 79 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ell~~-~~~D~V~I 79 (355)
++||||||+|.||.. +...|.+.+ .+| .++|+++++++.+.+ .. ...++.. ++|++++++. .++|+|++
T Consensus 2 ~m~IgvIG~G~mG~~-lA~~La~~G--~~V-~v~dr~~~~~~~l~~~~~--~g~gi~~---~~~~~e~v~~l~~aDvVil 72 (482)
T 2pgd_A 2 QADIALIGLAVMGQN-LILNMNDHG--FVV-CAFNRTVSKVDDFLANEA--KGTKVLG---AHSLEEMVSKLKKPRRIIL 72 (482)
T ss_dssp CBSEEEECCSHHHHH-HHHHHHHTT--CCE-EEECSSTHHHHHHHHTTT--TTSSCEE---CSSHHHHHHHBCSSCEEEE
T ss_pred CCeEEEEChHHHHHH-HHHHHHHCC--CeE-EEEeCCHHHHHHHHhccc--cCCCeEE---eCCHHHHHhhccCCCEEEE
Confidence 479999999999986 788887764 454 688999999988765 10 0013322 2789998862 35899999
Q ss_pred ecCCcccHHHHHHHH----HcCCeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 80 VLAGQAQVDTSLKLL----KAGKHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 80 ~tp~~~H~~~~~~al----~~GkhVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
++|+..+.+-+...+ +.|+ +++.- -+....+..++.+..++
T Consensus 73 aVp~~~~v~~vl~~l~~~l~~g~-iII~~-s~~~~~~~~~l~~~l~~ 117 (482)
T 2pgd_A 73 LVKAGQAVDNFIEKLVPLLDIGD-IIIDG-GNSEYRDTMRRCRDLKD 117 (482)
T ss_dssp CSCTTHHHHHHHHHHHHHCCTTC-EEEEC-SCCCHHHHHHHHHHHHH
T ss_pred eCCChHHHHHHHHHHHhhcCCCC-EEEEC-CCCCHHHHHHHHHHHHH
Confidence 999986655444322 3454 55542 13344456666666655
No 141
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=97.90 E-value=2.5e-05 Score=69.85 Aligned_cols=101 Identities=17% Similarity=0.134 Sum_probs=68.2
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeC-CHHHHHHHHHHHhhhcCCccc-----------------cccCcc
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSR-SEESAKSAAEVARKHFADVEC-----------------VWGDNG 64 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~-~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~ 64 (355)
+||||+|.|++|+. .++.+.++++ ++|++|.|. +++....+.+. ....+.... .+...+
T Consensus 2 ikVgI~G~G~iG~~-l~R~l~~~~~-veiv~i~~~~~~~~~a~l~~~-ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~d 78 (330)
T 1gad_O 2 IKVGINGFGRIGRI-VFRAAQKRSD-IEIVAINDLLDADYMAYMLKY-DSTHGRFDGTVEVKDGHLIVNGKKIRVTAERD 78 (330)
T ss_dssp EEEEEECCSHHHHH-HHHHHHTCSS-EEEEEEECSSCHHHHHHHHHC-CTTTCSCSSCEEEETTEEEETTEEEEEECCSS
T ss_pred eEEEEECcCHHHHH-HHHHHHcCCC-eEEEEEcCCCChhHHhHhhcc-cccCCCCCCeEEEcCCEEEECCEEEEEEEcCC
Confidence 79999999999986 8888888876 999999997 34433322221 011111110 010123
Q ss_pred hhhh-hcCCCccEEEEecCCcccHHHHHHHHHcC-CeEEEecCC
Q 018445 65 LEQI-IKEDSILGVAVVLAGQAQVDTSLKLLKAG-KHVIQEKPA 106 (355)
Q Consensus 65 ~~el-l~~~~~D~V~I~tp~~~H~~~~~~al~~G-khVl~EKP~ 106 (355)
.+++ ..+.++|+|+-|||.....+.+.+.+++| |-|.+--|+
T Consensus 79 p~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~ 122 (330)
T 1gad_O 79 PANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPS 122 (330)
T ss_dssp GGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred hhhCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEECCCC
Confidence 4444 12235899999999999999999999999 456666555
No 142
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=97.89 E-value=2.6e-05 Score=69.66 Aligned_cols=103 Identities=11% Similarity=0.212 Sum_probs=70.8
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
+||||||+|.||.. +...|.+.+ .+| .++|+++++++.+.+ . ++.. ++++++++++ .|+|++++|
T Consensus 31 ~~I~iIG~G~mG~~-~a~~l~~~g--~~V-~~~~~~~~~~~~~~~----~--g~~~---~~~~~~~~~~--~DvVi~av~ 95 (316)
T 2uyy_A 31 KKIGFLGLGLMGSG-IVSNLLKMG--HTV-TVWNRTAEKCDLFIQ----E--GARL---GRTPAEVVST--CDITFACVS 95 (316)
T ss_dssp SCEEEECCSHHHHH-HHHHHHHTT--CCE-EEECSSGGGGHHHHH----T--TCEE---CSCHHHHHHH--CSEEEECCS
T ss_pred CeEEEEcccHHHHH-HHHHHHhCC--CEE-EEEeCCHHHHHHHHH----c--CCEE---cCCHHHHHhc--CCEEEEeCC
Confidence 79999999999985 777787654 454 678999999887764 2 3322 2678888875 899999999
Q ss_pred CcccHHHHHH-------HHHcCCeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 83 GQAQVDTSLK-------LLKAGKHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 83 ~~~H~~~~~~-------al~~GkhVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
+..+.+-+.. .+..|+.|+.- -+.+....++|.+...+
T Consensus 96 ~~~~~~~v~~~~~~~~~~l~~~~~vv~~--s~~~~~~~~~l~~~~~~ 140 (316)
T 2uyy_A 96 DPKAAKDLVLGPSGVLQGIRPGKCYVDM--STVDADTVTELAQVIVS 140 (316)
T ss_dssp SHHHHHHHHHSTTCGGGGCCTTCEEEEC--SCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHcCchhHhhcCCCCCEEEEC--CCCCHHHHHHHHHHHHH
Confidence 7666555443 23345555522 13455566777776655
No 143
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=97.85 E-value=1.5e-05 Score=71.92 Aligned_cols=96 Identities=22% Similarity=0.265 Sum_probs=61.3
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhh-hcCC----ccccccCcchhhhhcCCCcc
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARK-HFAD----VECVWGDNGLEQIIKEDSIL 75 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~ell~~~~~D 75 (355)
|++||+|||+|.||.. +...|.+.+ .+| .++++++++++.+.+.... +.|+ +. . ++++++ +++ .|
T Consensus 13 ~~~kI~iIG~G~mG~a-la~~L~~~G--~~V-~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~-~--~~~~~~-~~~--aD 82 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTV-FAQMLHENG--EEV-ILWARRKEIVDLINVSHTSPYVEESKITVR-A--TNDLEE-IKK--ED 82 (335)
T ss_dssp -CCEEEEECCSHHHHH-HHHHHHHTT--CEE-EEECSSHHHHHHHHHHSCBTTBTTCCCCSE-E--ESCGGG-CCT--TE
T ss_pred cCCcEEEECcCHHHHH-HHHHHHhCC--CeE-EEEeCCHHHHHHHHHhCCcccCCCCeeeEE-E--eCCHHH-hcC--CC
Confidence 8999999999999985 778887765 355 5789999998887762100 1111 12 1 267777 554 89
Q ss_pred EEEEecCCcccHHHHHHHHH-cCCe-EEEecCCC
Q 018445 76 GVAVVLAGQAQVDTSLKLLK-AGKH-VIQEKPAA 107 (355)
Q Consensus 76 ~V~I~tp~~~H~~~~~~al~-~Gkh-Vl~EKP~a 107 (355)
+|++++|+....+++.. +. .|+. |.+-|.+.
T Consensus 83 vVil~vk~~~~~~v~~~-l~~~~~~vv~~~nGi~ 115 (335)
T 1z82_A 83 ILVIAIPVQYIREHLLR-LPVKPSMVLNLSKGIE 115 (335)
T ss_dssp EEEECSCGGGHHHHHTT-CSSCCSEEEECCCCCC
T ss_pred EEEEECCHHHHHHHHHH-hCcCCCEEEEEeCCCC
Confidence 99999998544444432 32 3433 44455554
No 144
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=97.84 E-value=2.4e-05 Score=70.34 Aligned_cols=102 Identities=18% Similarity=0.116 Sum_probs=68.1
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEe-C-CHHHHHHHHHHHhhh---cCCcc-------------c-cccC
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWS-R-SEESAKSAAEVARKH---FADVE-------------C-VWGD 62 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d-~-~~~~~~~~~~~~~~~---~~~~~-------------~-~~~~ 62 (355)
.+||||+|.|.+|+. .++.|.++++ ++|++|.| . +.+......+. ... +++.. . .+..
T Consensus 17 ~ikVgI~G~G~iGr~-llR~l~~~p~-veivaindp~~~~~~~a~ll~~-ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~ 93 (354)
T 3cps_A 17 QGTLGINGFGRIGRL-VLRACMERND-ITVVAINDPFMDVEYMAYLLKY-DSVHGNFNGTVEVSGKDLCINGKVVKVFQA 93 (354)
T ss_dssp -CEEEEECCSHHHHH-HHHHHHTCSS-CEEEEEECTTSCHHHHHHHHHC-CTTTCSCSSCEEECC-CEEETTEEEEEECC
T ss_pred ceEEEEECCCHHHHH-HHHHHHcCCC-eEEEEecCCCCChhHhhhhhcc-cccCCCCCCcEEEeCCEEEECCeEEEEEec
Confidence 469999999999986 8888888776 99999999 3 33322222110 011 11110 0 1101
Q ss_pred cchhhhh-cCCCccEEEEecCCcccHHHHHHHHHcC-CeEEEecCC
Q 018445 63 NGLEQII-KEDSILGVAVVLAGQAQVDTSLKLLKAG-KHVIQEKPA 106 (355)
Q Consensus 63 ~~~~ell-~~~~~D~V~I~tp~~~H~~~~~~al~~G-khVl~EKP~ 106 (355)
.+.+++. .+.++|+|+-|||.....+.+.+.+++| |.|++.-|-
T Consensus 94 ~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~pa 139 (354)
T 3cps_A 94 KDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPP 139 (354)
T ss_dssp SCGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCC
T ss_pred CChHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCCC
Confidence 2455542 1245899999999999999999999999 568888775
No 145
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=97.84 E-value=8.6e-05 Score=70.40 Aligned_cols=112 Identities=12% Similarity=0.213 Sum_probs=75.2
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHH-HHhhhcCCccccccCcchhhhhcC-CCccEEE
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAE-VARKHFADVECVWGDNGLEQIIKE-DSILGVA 78 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ell~~-~~~D~V~ 78 (355)
|..||||||+|.||.. ....|.+.+ .+| .++|+++++++.+.+ ... ..++.. ++|++++++. .++|+|+
T Consensus 9 ~~~~IgvIGlG~MG~~-lA~~La~~G--~~V-~v~dr~~~~~~~l~~~~~~--~~gi~~---~~s~~e~v~~l~~aDvVi 79 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQN-LILNAADHG--FTV-CAYNRTQSKVDHFLANEAK--GKSIIG---ATSIEDFISKLKRPRKVM 79 (497)
T ss_dssp CCCSEEEECCSHHHHH-HHHHHHHTT--CCE-EEECSSSHHHHHHHHTTTT--TSSEEC---CSSHHHHHHTSCSSCEEE
T ss_pred CCCCEEEEeeHHHHHH-HHHHHHHCC--CEE-EEEeCCHHHHHHHHccccc--CCCeEE---eCCHHHHHhcCCCCCEEE
Confidence 7889999999999986 778887765 465 588999999988765 110 013332 2789998875 4589999
Q ss_pred EecCCcccHHHHHHHHHcC---CeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 79 VVLAGQAQVDTSLKLLKAG---KHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 79 I~tp~~~H~~~~~~al~~G---khVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
+++|+....+-+...+... -.+++.- -+....+..++.+..++
T Consensus 80 l~Vp~~~~v~~vl~~l~~~l~~g~iIId~-s~~~~~~~~~l~~~l~~ 125 (497)
T 2p4q_A 80 LLVKAGAPVDALINQIVPLLEKGDIIIDG-GNSHFPDSNRRYEELKK 125 (497)
T ss_dssp ECCCSSHHHHHHHHHHGGGCCTTCEEEEC-SCCCHHHHHHHHHHHHH
T ss_pred EEcCChHHHHHHHHHHHHhCCCCCEEEEC-CCCChhHHHHHHHHHHH
Confidence 9999976554443333321 1355552 24455666777776666
No 146
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=97.82 E-value=6.1e-05 Score=65.94 Aligned_cols=100 Identities=17% Similarity=0.146 Sum_probs=67.8
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCcc-ccccCcchhhhhcCCCccEEEEec
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVE-CVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
|||+|||+|.||.. +...|.+.+ .+| .++|+++++++.+.+ . ++. ..+ ++++++ . +.|+|++++
T Consensus 1 m~i~iiG~G~~G~~-~a~~l~~~g--~~V-~~~~~~~~~~~~~~~----~--g~~~~~~--~~~~~~-~--~~D~vi~av 65 (279)
T 2f1k_A 1 MKIGVVGLGLIGAS-LAGDLRRRG--HYL-IGVSRQQSTCEKAVE----R--QLVDEAG--QDLSLL-Q--TAKIIFLCT 65 (279)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CEE-EEECSCHHHHHHHHH----T--TSCSEEE--SCGGGG-T--TCSEEEECS
T ss_pred CEEEEEcCcHHHHH-HHHHHHHCC--CEE-EEEECCHHHHHHHHh----C--CCCcccc--CCHHHh-C--CCCEEEEEC
Confidence 58999999999985 788887654 465 456999999887653 2 221 112 678888 4 489999999
Q ss_pred CCcccHHHHHHHHHc---CCeEEEecCCCCCHHHHHHHHHH
Q 018445 82 AGQAQVDTSLKLLKA---GKHVIQEKPAAANISEIENALSR 119 (355)
Q Consensus 82 p~~~H~~~~~~al~~---GkhVl~EKP~a~~~~e~~~l~~~ 119 (355)
|+..+.+++...... |+ +++.- -+.+....+.+.+.
T Consensus 66 ~~~~~~~~~~~l~~~~~~~~-~vv~~-~~~~~~~~~~~~~~ 104 (279)
T 2f1k_A 66 PIQLILPTLEKLIPHLSPTA-IVTDV-ASVKTAIAEPASQL 104 (279)
T ss_dssp CHHHHHHHHHHHGGGSCTTC-EEEEC-CSCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCCCC-EEEEC-CCCcHHHHHHHHHH
Confidence 999888877665432 33 44542 34555555554443
No 147
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=97.81 E-value=3.5e-05 Score=66.18 Aligned_cols=78 Identities=17% Similarity=0.169 Sum_probs=56.6
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHH--------------HHHHHHHHhhhcCCccccccCcchhh
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEES--------------AKSAAEVARKHFADVECVWGDNGLEQ 67 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~e 67 (355)
.+||||||+|.||.. ....|.+.+ .+| .++|+++++ .+.+.+ + .+.. . +++.+|
T Consensus 19 ~~kIgiIG~G~mG~a-lA~~L~~~G--~~V-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~--~--~~~~~e 86 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRT-MAGALADLG--HEV-TIGTRDPKATLARAEPDAMGAPPFSQWLP---E-HPHV--H--LAAFAD 86 (245)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHTT--CEE-EEEESCHHHHHTCC-------CCHHHHGG---G-STTC--E--EEEHHH
T ss_pred CCeEEEECCCHHHHH-HHHHHHHCC--CEE-EEEeCChhhhhhhhhhhhhcchhhhHHHh---h-cCce--e--ccCHHH
Confidence 579999999999985 778887765 465 467999987 333322 1 1122 1 278889
Q ss_pred hhcCCCccEEEEecCCcccHHHHHHH
Q 018445 68 IIKEDSILGVAVVLAGQAQVDTSLKL 93 (355)
Q Consensus 68 ll~~~~~D~V~I~tp~~~H~~~~~~a 93 (355)
++++ .|+|++++|+....+.+...
T Consensus 87 ~~~~--aDvVilavp~~~~~~~~~~i 110 (245)
T 3dtt_A 87 VAAG--AELVVNATEGASSIAALTAA 110 (245)
T ss_dssp HHHH--CSEEEECSCGGGHHHHHHHH
T ss_pred HHhc--CCEEEEccCcHHHHHHHHHh
Confidence 8886 79999999999888777543
No 148
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=97.78 E-value=9.8e-06 Score=70.96 Aligned_cols=110 Identities=21% Similarity=0.251 Sum_probs=74.8
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.||+|||+|.+|+. .+..|.+.+ ++ +.++++++++++.+++ ++ ++. .+ +++++++++ .|+|+++||
T Consensus 130 ~~v~iiGaG~~g~a-ia~~L~~~g--~~-V~v~~r~~~~~~~l~~---~~--g~~-~~--~~~~~~~~~--aDiVi~atp 195 (275)
T 2hk9_A 130 KSILVLGAGGASRA-VIYALVKEG--AK-VFLWNRTKEKAIKLAQ---KF--PLE-VV--NSPEEVIDK--VQVIVNTTS 195 (275)
T ss_dssp SEEEEECCSHHHHH-HHHHHHHHT--CE-EEEECSSHHHHHHHTT---TS--CEE-EC--SCGGGTGGG--CSEEEECSS
T ss_pred CEEEEECchHHHHH-HHHHHHHcC--CE-EEEEECCHHHHHHHHH---Hc--CCe-ee--hhHHhhhcC--CCEEEEeCC
Confidence 58999999999985 788887765 44 4789999999888765 22 332 11 578888865 899999999
Q ss_pred CcccHH---HH-HHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEec
Q 018445 83 GQAQVD---TS-LKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAEN 138 (355)
Q Consensus 83 ~~~H~~---~~-~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~ 138 (355)
...|.+ .+ ...++.|+.|+ + ++. ...++++.+++ .|..++.|..
T Consensus 196 ~~~~~~~~~~i~~~~l~~g~~vi-D--v~~---~~t~ll~~a~~------~g~~~v~g~~ 243 (275)
T 2hk9_A 196 VGLKDEDPEIFNYDLIKKDHVVV-D--IIY---KETKLLKKAKE------KGAKLLDGLP 243 (275)
T ss_dssp TTSSTTCCCSSCGGGCCTTSEEE-E--SSS---SCCHHHHHHHH------TTCEEECSHH
T ss_pred CCCCCCCCCCCCHHHcCCCCEEE-E--cCC---ChHHHHHHHHH------CcCEEECCHH
Confidence 988642 22 23455566543 3 222 33456777777 4777776643
No 149
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=97.77 E-value=3.5e-05 Score=72.91 Aligned_cols=81 Identities=7% Similarity=0.049 Sum_probs=51.9
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHh-hhcCCc---------cccccCcchhhhhcC
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVAR-KHFADV---------ECVWGDNGLEQIIKE 71 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~-~~~~~~---------~~~~~~~~~~ell~~ 71 (355)
.|||+|||+|.+|.. +...|.+.+.+.+|+ ++|+++++.+.+.+... -+.++. .....++++++.+++
T Consensus 9 ~mkI~VIG~G~vG~~-~A~~La~~g~g~~V~-~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~ 86 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGP-TCAMIAHKCPHITVT-VVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAE 86 (481)
T ss_dssp CCEEEEECCSTTHHH-HHHHHHHHCTTSEEE-EECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHH
T ss_pred CCEEEEECCCHHHHH-HHHHHHhcCCCCEEE-EEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhc
Confidence 369999999999986 677777653225765 46999999888753000 000110 000112577777765
Q ss_pred CCccEEEEecCCccc
Q 018445 72 DSILGVAVVLAGQAQ 86 (355)
Q Consensus 72 ~~~D~V~I~tp~~~H 86 (355)
.|+|+||+|+..+
T Consensus 87 --aDvvii~Vptp~~ 99 (481)
T 2o3j_A 87 --ADLIFISVNTPTK 99 (481)
T ss_dssp --CSEEEECCCCCBC
T ss_pred --CCEEEEecCCccc
Confidence 8999999877653
No 150
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=97.76 E-value=0.0013 Score=59.68 Aligned_cols=211 Identities=13% Similarity=0.211 Sum_probs=131.6
Q ss_pred eEEEEe-cccccchhccchhhh---cCCeEEEEEEEe-CCHHHHHHHHHHHhhhcCCcccc-------------------
Q 018445 4 RIAILG-AGIFVKTQYIPRLAE---ISDLVSLKFIWS-RSEESAKSAAEVARKHFADVECV------------------- 59 (355)
Q Consensus 4 rigiiG-~G~~~~~~~~~~l~~---~~~~~~vvai~d-~~~~~~~~~~~~~~~~~~~~~~~------------------- 59 (355)
||.|+| +|+||.. -+..+++ +|+.++|+|+.. .+.+.+.+-+. ++.|.....
T Consensus 79 ~I~ILGSTGSIGtq-TLdVi~~~p~~pd~f~V~aLaAg~Nv~lL~eQ~~---ef~P~~v~v~d~~~~~~L~~~l~~~~~~ 154 (488)
T 3au8_A 79 NVAIFGSTGSIGTN-ALNIIRECNKIENVFNVKALYVNKSVNELYEQAR---EFLPEYLCIHDKSVYEELKELVKNIKDY 154 (488)
T ss_dssp EEEEETTTSHHHHH-HHHHHHHHHHHSCCEEEEEEEESSCHHHHHHHHH---HHCCSEEEESCGGGTHHHHTGGGGSTTC
T ss_pred EEEEEccCcHHHHH-HHHHHHcccCCCCeEEEEEEEcCCCHHHHHHHHH---HcCCCEEEEcCHHHHHHHHHHhhhhcCC
Confidence 799999 7999986 7888888 667899999765 34444444333 444433211
Q ss_pred -----ccCcchhhhhcCCCccEEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHH-HHHhhccCCCCCCCCeE
Q 018445 60 -----WGDNGLEQIIKEDSILGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENA-LSRYNSICPDPPGQPIW 133 (355)
Q Consensus 60 -----~~~~~~~ell~~~~~D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l-~~~a~~~~~~~~~~~~~ 133 (355)
++.+.+.++.+.+++|.|+.+..-..-...+.+|+++||.|.+-- =.++--+-+| .++++++ ++..+
T Consensus 155 ~~~v~~G~egl~e~a~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK~IALAN--KESLV~aG~Lv~~~a~~~-----~g~~I 227 (488)
T 3au8_A 155 KPIILCGDEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAIMNNKIVALAN--KESIVSAGFFLKKLLNIH-----KNAKI 227 (488)
T ss_dssp CCEEEEHHHHHHHHHHCTTCCEEEECCCHHHHHHHHHHHHHTTCEEEECC--SHHHHHHHHHHHHHHHHS-----TTCEE
T ss_pred CceEEeCHHHHHHHhcCCCCCEEEEccccHhHHHHHHHHHHCCCcEEEec--chhhhhchHHHHHHHHhc-----CCCeE
Confidence 112334566666789999999999999999999999999988742 1333334443 4666662 15555
Q ss_pred EEEecccCchHHHHHHHHHH---------------HhCCeeEEEEEEeeccCCCCC------------ccCcccccc---
Q 018445 134 AVAENYRFEPAFVECKKLIA---------------EIGDMMSVQVIVEGSMNSSNP------------YFSSSWRRN--- 183 (355)
Q Consensus 134 ~v~~~~r~~p~~~~~k~~i~---------------~iG~i~~v~~~~~~~~~~~~~------------~~~~~w~~~--- 183 (355)
.. -+.-.-.+.+.+. ...+|..+-.+-++...+..+ -..++|.=.
T Consensus 228 lP-----VDSEHsAIFQcL~g~~~~~~~~~~~~~~~~~~V~kIiLTASGGPFR~~~~eeL~~VTpeqALkHPnWsMG~KI 302 (488)
T 3au8_A 228 IP-----VDSEHSAIFQCLDNNKVLKTKCLQDNFSKINNINKIFLCSSGGPFQNLTMDELKNVTSENALKHPKWKMGKKI 302 (488)
T ss_dssp EE-----CSHHHHHHHHHSCHHHHTTSCTTCTTHHHHTTEEEEEEEECCCTTTTCCHHHHTTCCTTTC---------CHH
T ss_pred EE-----echhHHHHHHHhcCCcccccccccccccccccccEEEEECCCcccCCCCHHHHhCCCHHHHhcCCCccCCcee
Confidence 43 2444444444442 124577777765543222111 013567421
Q ss_pred -ccCccccchhhHHHHHHHHHhCCcceeEEEeecccCCCCCCCceEEEEEEecCCc
Q 018445 184 -FTGGFILDMGVHFIAGLRMITGCEVVSVSAITSHIDKTLPPPDNISSNFQLENGC 238 (355)
Q Consensus 184 -~~gg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~G~ 238 (355)
.+.-.|++-|.--|..- ||||-+++++....+ .....+.+++|.||.
T Consensus 303 TIDSATMmNKGLEvIEA~-~LF~v~~d~IeVvVH-------PQSIIHSmVef~DGS 350 (488)
T 3au8_A 303 TIDSATMMNKGLEVIETH-FLFDVDYNDIEVIVH-------KECIIHSCVEFIDKS 350 (488)
T ss_dssp HHHHHSSHHHHHHHHHHH-HHHTCCGGGEEEEEC-------TTCCEEEEEEETTSC
T ss_pred eeehHhHhhhhHHHhHHH-HHcCCCHHHeEEEEC-------CCCceeEEEEEeCCc
Confidence 22346777777777754 999988888888774 355789999999995
No 151
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=97.73 E-value=0.0001 Score=68.26 Aligned_cols=107 Identities=8% Similarity=0.037 Sum_probs=68.6
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHH--------hhh----cCCccccccCcchhhhhc
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVA--------RKH----FADVECVWGDNGLEQIIK 70 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~--------~~~----~~~~~~~~~~~~~~ell~ 70 (355)
|||+|||+|.+|.. ....|.+ + .+|+ ++|+++++.+.+.+.. .+. ..++.. ++|+++.++
T Consensus 37 mkIaVIGlG~mG~~-lA~~La~--G-~~V~-~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~---ttd~~ea~~ 108 (432)
T 3pid_A 37 MKITISGTGYVGLS-NGVLIAQ--N-HEVV-ALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRA---TTDKHDAYR 108 (432)
T ss_dssp CEEEEECCSHHHHH-HHHHHHT--T-SEEE-EECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEE---ESCHHHHHT
T ss_pred CEEEEECcCHHHHH-HHHHHHc--C-CeEE-EEecCHHHhhHHhccCCccccccHHHHHhhccCCeEE---EcCHHHHHh
Confidence 69999999999985 5556665 3 5775 5799999998876510 000 001221 278888888
Q ss_pred CCCccEEEEecCCcccH-------HHH-------HHHHHcCCeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 71 EDSILGVAVVLAGQAQV-------DTS-------LKLLKAGKHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 71 ~~~~D~V~I~tp~~~H~-------~~~-------~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
+ .|+|++++|+.... ..+ .. ++.|.-|..+. +..+..++++.+...+
T Consensus 109 ~--aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~S--Tv~pgtt~~l~~~l~~ 169 (432)
T 3pid_A 109 N--ADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKS--TIPVGFTRDIKERLGI 169 (432)
T ss_dssp T--CSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECS--CCCTTHHHHHHHHHTC
T ss_pred C--CCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeC--CCChHHHHHHHHHHhh
Confidence 6 89999999997431 111 22 45565555554 5556667777666554
No 152
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=97.72 E-value=4.9e-05 Score=67.89 Aligned_cols=103 Identities=20% Similarity=0.137 Sum_probs=69.7
Q ss_pred ceEEEEecccccchhccchhhhc--CCeEEEEEEEeC-CHHHHHHHHHHHhhh--cC-------------Ccccccc-Cc
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEI--SDLVSLKFIWSR-SEESAKSAAEVARKH--FA-------------DVECVWG-DN 63 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~--~~~~~vvai~d~-~~~~~~~~~~~~~~~--~~-------------~~~~~~~-~~ 63 (355)
+||||+|.|.+|+. .++.|.++ ++ ++|++|.|. +++.+....+.-+-+ ++ +....+. ..
T Consensus 1 ~kVgI~G~G~iGr~-llR~l~~~~~p~-~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~ 78 (332)
T 1hdg_O 1 ARVAINGFGRIGRL-VYRIIYERKNPD-IEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEP 78 (332)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHTCTT-CEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCS
T ss_pred CEEEEEccCHHHHH-HHHHHHhCCCCC-eEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecC
Confidence 58999999999986 88888887 66 999999997 444444333100011 10 0000110 12
Q ss_pred chhhh-hcCCCccEEEEecCCcccHHHHHHHHHcC-CeEEEecCCC
Q 018445 64 GLEQI-IKEDSILGVAVVLAGQAQVDTSLKLLKAG-KHVIQEKPAA 107 (355)
Q Consensus 64 ~~~el-l~~~~~D~V~I~tp~~~H~~~~~~al~~G-khVl~EKP~a 107 (355)
+.+++ ..+.++|+|+-|||...-.+.+.+.+++| |.|++.=|-.
T Consensus 79 dp~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVId~~a~ 124 (332)
T 1hdg_O 79 DPSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAK 124 (332)
T ss_dssp SGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB
T ss_pred ChHHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEEeCCCC
Confidence 44544 23236999999999999999999999999 5688887754
No 153
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=97.72 E-value=0.00026 Score=66.61 Aligned_cols=111 Identities=11% Similarity=0.214 Sum_probs=72.8
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcC-CCccEEEEec
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKE-DSILGVAVVL 81 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~-~~~D~V~I~t 81 (355)
+||||||+|.||.. ....|.+.+ .+| .++|+++++.+.+.+ ....+.... .++|++|+++. +++|+|++++
T Consensus 5 ~kIgiIGlG~MG~~-lA~~L~~~G--~~V-~v~dr~~~~~~~l~~---~g~~g~~i~-~~~s~~e~v~~l~~aDvVil~V 76 (484)
T 4gwg_A 5 ADIALIGLAVMGQN-LILNMNDHG--FVV-CAFNRTVSKVDDFLA---NEAKGTKVV-GAQSLKEMVSKLKKPRRIILLV 76 (484)
T ss_dssp BSEEEECCSHHHHH-HHHHHHHTT--CCE-EEECSSTHHHHHHHH---TTTTTSSCE-ECSSHHHHHHTBCSSCEEEECS
T ss_pred CEEEEEChhHHHHH-HHHHHHHCC--CEE-EEEeCCHHHHHHHHh---cccCCCcee-ccCCHHHHHhhccCCCEEEEec
Confidence 59999999999986 778887765 455 577999999998876 211121111 12789999874 4589999999
Q ss_pred CCcccHHHHHHHHHcC---CeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 82 AGQAQVDTSLKLLKAG---KHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 82 p~~~H~~~~~~al~~G---khVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
|+....+-+...+... -.+++..= +..+.+..++.+..++
T Consensus 77 p~~~~v~~vl~~l~~~L~~g~iIId~s-t~~~~~t~~~~~~l~~ 119 (484)
T 4gwg_A 77 KAGQAVDDFIEKLVPLLDTGDIIIDGG-NSEYRDTTRRCRDLKA 119 (484)
T ss_dssp CSSHHHHHHHHHHGGGCCTTCEEEECS-CCCHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHhcCCCCEEEEcC-CCCchHHHHHHHHHHh
Confidence 9986554333333321 23555531 3445566676666665
No 154
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=97.71 E-value=9.6e-05 Score=69.10 Aligned_cols=75 Identities=9% Similarity=0.018 Sum_probs=52.7
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhh-hc------------CC-ccccccCcchhhh
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARK-HF------------AD-VECVWGDNGLEQI 68 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~-~~------------~~-~~~~~~~~~~~el 68 (355)
|||+|||+|.+|.. +...|.+.+ .+| .++|+++++.+.+.+.... +. .+ +. . ++++++.
T Consensus 1 mkI~VIG~G~vG~~-~A~~la~~G--~~V-~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~-~--t~~~~~~ 73 (436)
T 1mv8_A 1 MRISIFGLGYVGAV-CAGCLSARG--HEV-IGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLS-G--TTDFKKA 73 (436)
T ss_dssp CEEEEECCSTTHHH-HHHHHHHTT--CEE-EEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEE-E--ESCHHHH
T ss_pred CEEEEECCCHHHHH-HHHHHHHCC--CEE-EEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceE-E--eCCHHHH
Confidence 58999999999985 677777654 465 4569999998887541000 00 11 21 1 2688888
Q ss_pred hcCCCccEEEEecCCccc
Q 018445 69 IKEDSILGVAVVLAGQAQ 86 (355)
Q Consensus 69 l~~~~~D~V~I~tp~~~H 86 (355)
+++ .|+|+||+|+..+
T Consensus 74 ~~~--aDvviiaVptp~~ 89 (436)
T 1mv8_A 74 VLD--SDVSFICVGTPSK 89 (436)
T ss_dssp HHT--CSEEEECCCCCBC
T ss_pred hcc--CCEEEEEcCCCcc
Confidence 875 8999999998876
No 155
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=97.69 E-value=2e-05 Score=71.18 Aligned_cols=87 Identities=18% Similarity=0.193 Sum_probs=61.2
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
+||||||+|.||.. +...|.+.+ .+| .++++++++....+. +. ++. . .++++++++ .|+|++++|
T Consensus 17 ~~I~IIG~G~mG~a-lA~~L~~~G--~~V-~~~~~~~~~~~~~a~---~~--G~~--~--~~~~e~~~~--aDvVilavp 81 (338)
T 1np3_A 17 KKVAIIGYGSQGHA-HACNLKDSG--VDV-TVGLRSGSATVAKAE---AH--GLK--V--ADVKTAVAA--ADVVMILTP 81 (338)
T ss_dssp SCEEEECCSHHHHH-HHHHHHHTT--CCE-EEECCTTCHHHHHHH---HT--TCE--E--ECHHHHHHT--CSEEEECSC
T ss_pred CEEEEECchHHHHH-HHHHHHHCc--CEE-EEEECChHHHHHHHH---HC--CCE--E--ccHHHHHhc--CCEEEEeCC
Confidence 58999999999985 888888754 465 467888766433332 23 432 1 378888875 899999999
Q ss_pred CcccHHHHH-HH---HHcCCeEEEec
Q 018445 83 GQAQVDTSL-KL---LKAGKHVIQEK 104 (355)
Q Consensus 83 ~~~H~~~~~-~a---l~~GkhVl~EK 104 (355)
+..+.+++. +. ++.|+.|..-+
T Consensus 82 ~~~~~~v~~~~i~~~l~~~~ivi~~~ 107 (338)
T 1np3_A 82 DEFQGRLYKEEIEPNLKKGATLAFAH 107 (338)
T ss_dssp HHHHHHHHHHHTGGGCCTTCEEEESC
T ss_pred cHHHHHHHHHHHHhhCCCCCEEEEcC
Confidence 999988877 43 33456565543
No 156
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=97.67 E-value=6.8e-05 Score=65.72 Aligned_cols=82 Identities=13% Similarity=0.073 Sum_probs=58.7
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
+||||||+|.||.. +...|.+.+...+| .++|+++++.+.+.+ . ++.... ++++++++++ +.|+|++++|
T Consensus 2 ~~I~iIG~G~mG~~-~a~~l~~~g~~~~V-~~~d~~~~~~~~~~~----~--g~~~~~-~~~~~~~~~~-~aDvVilavp 71 (281)
T 2g5c_A 2 QNVLIVGVGFMGGS-FAKSLRRSGFKGKI-YGYDINPESISKAVD----L--GIIDEG-TTSIAKVEDF-SPDFVMLSSP 71 (281)
T ss_dssp CEEEEESCSHHHHH-HHHHHHHTTCCSEE-EEECSCHHHHHHHHH----T--TSCSEE-ESCGGGGGGT-CCSEEEECSC
T ss_pred cEEEEEecCHHHHH-HHHHHHhcCCCcEE-EEEeCCHHHHHHHHH----C--CCcccc-cCCHHHHhcC-CCCEEEEcCC
Confidence 48999999999985 78888765421255 568999998877543 2 322111 1678888872 4899999999
Q ss_pred CcccHHHHHHHH
Q 018445 83 GQAQVDTSLKLL 94 (355)
Q Consensus 83 ~~~H~~~~~~al 94 (355)
+..+.+++....
T Consensus 72 ~~~~~~v~~~l~ 83 (281)
T 2g5c_A 72 VRTFREIAKKLS 83 (281)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 998888876644
No 157
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=97.67 E-value=0.00017 Score=68.04 Aligned_cols=77 Identities=14% Similarity=0.145 Sum_probs=52.0
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHH------------HHhhh-cCCccccccCcchhhhh
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAE------------VARKH-FADVECVWGDNGLEQII 69 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~------------~~~~~-~~~~~~~~~~~~~~ell 69 (355)
|||+|||+|.+|.. +...|.+.+.+.+| .++|+++++.+.+.+ ...+. ..++.. ++++++.+
T Consensus 6 mkI~VIG~G~mG~~-lA~~La~~g~G~~V-~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~---t~~~~e~~ 80 (467)
T 2q3e_A 6 KKICCIGAGYVGGP-TCSVIAHMCPEIRV-TVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFF---STNIDDAI 80 (467)
T ss_dssp CEEEEECCSTTHHH-HHHHHHHHCTTSEE-EEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE---ESCHHHHH
T ss_pred cEEEEECCCHHHHH-HHHHHHhcCCCCEE-EEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEE---ECCHHHHH
Confidence 69999999999986 77777766312576 456999999887532 00000 012221 26788888
Q ss_pred cCCCccEEEEecCCccc
Q 018445 70 KEDSILGVAVVLAGQAQ 86 (355)
Q Consensus 70 ~~~~~D~V~I~tp~~~H 86 (355)
++ .|+|++|+|+..+
T Consensus 81 ~~--aDvViiaVptp~~ 95 (467)
T 2q3e_A 81 KE--ADLVFISVNTPTK 95 (467)
T ss_dssp HH--CSEEEECCCCCBC
T ss_pred hc--CCEEEEEcCCchh
Confidence 75 8999999887665
No 158
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=97.65 E-value=4.2e-05 Score=67.33 Aligned_cols=77 Identities=16% Similarity=0.146 Sum_probs=57.6
Q ss_pred CceEEEEec-ccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEe
Q 018445 2 APRIAILGA-GIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 2 ~~rigiiG~-G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
.+||+|||+ |.||.. ....|.+.+ .+|+ ++|+++++++.+.+ . ++.. .+.++++++ .|+|+++
T Consensus 11 mm~I~iIG~tG~mG~~-la~~l~~~g--~~V~-~~~r~~~~~~~~~~----~--g~~~----~~~~~~~~~--aDvVi~a 74 (286)
T 3c24_A 11 PKTVAILGAGGKMGAR-ITRKIHDSA--HHLA-AIEIAPEGRDRLQG----M--GIPL----TDGDGWIDE--ADVVVLA 74 (286)
T ss_dssp CCEEEEETTTSHHHHH-HHHHHHHSS--SEEE-EECCSHHHHHHHHH----T--TCCC----CCSSGGGGT--CSEEEEC
T ss_pred CCEEEEECCCCHHHHH-HHHHHHhCC--CEEE-EEECCHHHHHHHHh----c--CCCc----CCHHHHhcC--CCEEEEc
Confidence 369999999 999985 777787654 5765 78999998887654 2 3321 466777765 8999999
Q ss_pred cCCcccHHHHHHHH
Q 018445 81 LAGQAQVDTSLKLL 94 (355)
Q Consensus 81 tp~~~H~~~~~~al 94 (355)
+|+....+++....
T Consensus 75 v~~~~~~~v~~~l~ 88 (286)
T 3c24_A 75 LPDNIIEKVAEDIV 88 (286)
T ss_dssp SCHHHHHHHHHHHG
T ss_pred CCchHHHHHHHHHH
Confidence 99988666665543
No 159
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=97.63 E-value=0.00041 Score=65.47 Aligned_cols=110 Identities=11% Similarity=0.200 Sum_probs=72.2
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcC-CCccEEEEe
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKE-DSILGVAVV 80 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~-~~~D~V~I~ 80 (355)
+.||||||+|.||.. ....|.+.+ .+| .++++++++++.+.+... ..++.. ++|++|++++ ++.|+|+++
T Consensus 15 ~~~IgvIGlG~MG~~-lA~~La~~G--~~V-~v~~r~~~~~~~l~~~~~--~~gi~~---~~s~~e~v~~l~~aDvVil~ 85 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRN-LALNIESRG--YTV-SIFNRSREKTEEVIAENP--GKKLVP---YYTVKEFVESLETPRRILLM 85 (480)
T ss_dssp CBSEEEECCSHHHHH-HHHHHHTTT--CCE-EEECSSHHHHHHHHHHST--TSCEEE---CSSHHHHHHTBCSSCEEEEC
T ss_pred CCeEEEEccHHHHHH-HHHHHHhCC--CeE-EEEeCCHHHHHHHHhhCC--CCCeEE---eCCHHHHHhCCCCCCEEEEE
Confidence 469999999999986 777887654 455 678999999988876210 113332 2789998875 458999999
Q ss_pred cCCcccHHHHHHHHHc----CCeEEEecCCCCCHHHHHHHHHHhhc
Q 018445 81 LAGQAQVDTSLKLLKA----GKHVIQEKPAAANISEIENALSRYNS 122 (355)
Q Consensus 81 tp~~~H~~~~~~al~~----GkhVl~EKP~a~~~~e~~~l~~~a~~ 122 (355)
+|+....+-+..-+.. |+ +++.- -+....+..++.+..++
T Consensus 86 Vp~~~~v~~vl~~l~~~l~~g~-iIId~-s~g~~~~t~~l~~~l~~ 129 (480)
T 2zyd_A 86 VKAGAGTDAAIDSLKPYLDKGD-IIIDG-GNTFFQDTIRRNRELSA 129 (480)
T ss_dssp SCSSSHHHHHHHHHGGGCCTTC-EEEEC-SCCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhcCCCC-EEEEC-CCCCHHHHHHHHHHHHH
Confidence 9997654444333332 33 45531 23344455666666655
No 160
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.63 E-value=0.0002 Score=55.72 Aligned_cols=105 Identities=13% Similarity=0.145 Sum_probs=66.3
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcC---CCccEE
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKE---DSILGV 77 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~---~~~D~V 77 (355)
|.-+|.|+|+|.+|.. ....|.+.+ .+++ ++|+++++.+.+.+ . ++...++..+-++.+.. .+.|+|
T Consensus 6 ~~~~viIiG~G~~G~~-la~~L~~~g--~~v~-vid~~~~~~~~~~~----~--g~~~i~gd~~~~~~l~~a~i~~ad~v 75 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSL-LGEKLLASD--IPLV-VIETSRTRVDELRE----R--GVRAVLGNAANEEIMQLAHLECAKWL 75 (140)
T ss_dssp CCSCEEEECCSHHHHH-HHHHHHHTT--CCEE-EEESCHHHHHHHHH----T--TCEEEESCTTSHHHHHHTTGGGCSEE
T ss_pred CCCCEEEECcCHHHHH-HHHHHHHCC--CCEE-EEECCHHHHHHHHH----c--CCCEEECCCCCHHHHHhcCcccCCEE
Confidence 4568999999999986 777887654 4664 45999999888764 2 34333332222333432 458999
Q ss_pred EEecCCcccHH-HHHHHHHc--CCeEEEecCCCCCHHHHHHHHH
Q 018445 78 AVVLAGQAQVD-TSLKLLKA--GKHVIQEKPAAANISEIENALS 118 (355)
Q Consensus 78 ~I~tp~~~H~~-~~~~al~~--GkhVl~EKP~a~~~~e~~~l~~ 118 (355)
++++|++.... ++..+-+. +.+|++- +.+.+..+.|.+
T Consensus 76 i~~~~~~~~n~~~~~~a~~~~~~~~iiar---~~~~~~~~~l~~ 116 (140)
T 3fwz_A 76 ILTIPNGYEAGEIVASARAKNPDIEIIAR---AHYDDEVAYITE 116 (140)
T ss_dssp EECCSCHHHHHHHHHHHHHHCSSSEEEEE---ESSHHHHHHHHH
T ss_pred EEECCChHHHHHHHHHHHHHCCCCeEEEE---ECCHHHHHHHHH
Confidence 99999976544 33333332 4667764 556666655543
No 161
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=97.62 E-value=5.4e-05 Score=69.09 Aligned_cols=86 Identities=15% Similarity=0.167 Sum_probs=57.2
Q ss_pred CCc-eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHh--hhcCCcc---ccccCcchhhhhcCCCc
Q 018445 1 MAP-RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVAR--KHFADVE---CVWGDNGLEQIIKEDSI 74 (355)
Q Consensus 1 m~~-rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~ell~~~~~ 74 (355)
|.| ||+|||+|.||.. +...|.+.+ .+| .++|+++++++.+.+... .+.++.. ....++++++++++ .
T Consensus 13 m~M~kI~iIG~G~mG~~-la~~L~~~G--~~V-~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--a 86 (366)
T 1evy_A 13 LYLNKAVVFGSGAFGTA-LAMVLSKKC--REV-CVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNG--A 86 (366)
T ss_dssp CCEEEEEEECCSHHHHH-HHHHHTTTE--EEE-EEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTT--C
T ss_pred hccCeEEEECCCHHHHH-HHHHHHhCC--CEE-EEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcC--C
Confidence 567 9999999999985 777776543 565 578999999888765310 0111110 00012678887775 8
Q ss_pred cEEEEecCCcccHHHHHH
Q 018445 75 LGVAVVLAGQAQVDTSLK 92 (355)
Q Consensus 75 D~V~I~tp~~~H~~~~~~ 92 (355)
|+|++++|+....+++..
T Consensus 87 DvVilav~~~~~~~v~~~ 104 (366)
T 1evy_A 87 EIILFVIPTQFLRGFFEK 104 (366)
T ss_dssp SSEEECCCHHHHHHHHHH
T ss_pred CEEEECCChHHHHHHHHH
Confidence 999999998666665544
No 162
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=97.58 E-value=1.8e-05 Score=70.49 Aligned_cols=92 Identities=13% Similarity=0.054 Sum_probs=65.5
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
-+++|||+|.+|.. |+.+|....+ ++-+.+++++ ++++++++..+.+ ++.... .++++++.+ .|+|+.|||
T Consensus 122 ~~v~iIGaG~~a~~-~~~al~~~~~-~~~V~v~~r~--~a~~la~~l~~~~-g~~~~~--~~~~eav~~--aDIVi~aT~ 192 (313)
T 3hdj_A 122 SVLGLFGAGTQGAE-HAAQLSARFA-LEAILVHDPY--ASPEILERIGRRC-GVPARM--AAPADIAAQ--ADIVVTATR 192 (313)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHSC-CCEEEEECTT--CCHHHHHHHHHHH-TSCEEE--CCHHHHHHH--CSEEEECCC
T ss_pred cEEEEECccHHHHH-HHHHHHHhCC-CcEEEEECCc--HHHHHHHHHHHhc-CCeEEE--eCHHHHHhh--CCEEEEccC
Confidence 47999999999985 8888886544 5666899999 7777776443222 343222 289999986 899999999
Q ss_pred CcccHHHHHHHHHcCCeEEEec
Q 018445 83 GQAQVDTSLKLLKAGKHVIQEK 104 (355)
Q Consensus 83 ~~~H~~~~~~al~~GkhVl~EK 104 (355)
...- -+-...++.|.||..=-
T Consensus 193 s~~p-vl~~~~l~~G~~V~~vG 213 (313)
T 3hdj_A 193 STTP-LFAGQALRAGAFVGAIG 213 (313)
T ss_dssp CSSC-SSCGGGCCTTCEEEECC
T ss_pred CCCc-ccCHHHcCCCcEEEECC
Confidence 8631 11234578899998753
No 163
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=97.58 E-value=0.00011 Score=61.41 Aligned_cols=80 Identities=24% Similarity=0.231 Sum_probs=56.7
Q ss_pred ceEEEEe-cccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcC--CccccccCcchhhhhcCCCccEEEE
Q 018445 3 PRIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFA--DVECVWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 3 ~rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ell~~~~~D~V~I 79 (355)
|||+||| +|.+|.. ....|.+.+ .+|+ ++++++++.+.+.+......+ .+. . +++++++++ .|+|++
T Consensus 1 m~i~iiGa~G~~G~~-ia~~l~~~g--~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~--~D~Vi~ 70 (212)
T 1jay_A 1 MRVALLGGTGNLGKG-LALRLATLG--HEIV-VGSRREEKAEAKAAEYRRIAGDASIT--G--MKNEDAAEA--CDIAVL 70 (212)
T ss_dssp CEEEEETTTSHHHHH-HHHHHHTTT--CEEE-EEESSHHHHHHHHHHHHHHHSSCCEE--E--EEHHHHHHH--CSEEEE
T ss_pred CeEEEEcCCCHHHHH-HHHHHHHCC--CEEE-EEeCCHHHHHHHHHHhccccccCCCC--h--hhHHHHHhc--CCEEEE
Confidence 5899999 9999985 777777654 4654 579999988877653211111 121 2 678888875 899999
Q ss_pred ecCCcccHHHHHH
Q 018445 80 VLAGQAQVDTSLK 92 (355)
Q Consensus 80 ~tp~~~H~~~~~~ 92 (355)
++|+..+.+++.+
T Consensus 71 ~~~~~~~~~~~~~ 83 (212)
T 1jay_A 71 TIPWEHAIDTARD 83 (212)
T ss_dssp CSCHHHHHHHHHH
T ss_pred eCChhhHHHHHHH
Confidence 9998877766654
No 164
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=97.54 E-value=0.00017 Score=65.25 Aligned_cols=89 Identities=20% Similarity=0.224 Sum_probs=63.0
Q ss_pred CceEEEEe-cccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcC------------CccccccCcchhhh
Q 018445 2 APRIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFA------------DVECVWGDNGLEQI 68 (355)
Q Consensus 2 ~~rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~el 68 (355)
++|||||| +|..|.. .++.|.++|. ++|+.+.+++.. .+.+.+ .+| +.... ..+.++
T Consensus 7 ~~kVaIvGATGyvG~e-LlrlL~~hP~-~el~~l~S~~sa-Gk~~~~----~~p~~~~~~~~~~~~~~~v~--~~~~~~- 76 (359)
T 4dpl_A 7 TLKAAILGATGLVGIE-YVRMLSNHPY-IKPAYLAGKGSV-GKPYGE----VVRWQTVGQVPKEIADMEIK--PTDPKL- 76 (359)
T ss_dssp CEEEEETTTTSTTHHH-HHHHHTTCSS-EEEEEEEESTTT-TSBHHH----HCCCCSSSCCCHHHHTCBCE--ECCGGG-
T ss_pred CCeEEEECCCCHHHHH-HHHHHHhCCC-ceEEEEECchhc-CCChhH----hcccccccccccccccceEE--eCCHHH-
Confidence 47999999 6989987 7888888887 999999887542 222222 111 11110 012333
Q ss_pred hcCCCccEEEEecCCcccHHHHHHHHHcCCeEEE
Q 018445 69 IKEDSILGVAVVLAGQAQVDTSLKLLKAGKHVIQ 102 (355)
Q Consensus 69 l~~~~~D~V~I~tp~~~H~~~~~~al~~GkhVl~ 102 (355)
+ .++|+|+.|+|+....+++..++++|..|+-
T Consensus 77 ~--~~vDvvf~a~p~~~s~~~a~~~~~~G~~vID 108 (359)
T 4dpl_A 77 M--DDVDIIFSPLPQGAAGPVEEQFAKEGFPVIS 108 (359)
T ss_dssp C--TTCCEEEECCCTTTHHHHHHHHHHTTCEEEE
T ss_pred h--cCCCEEEECCChHHHHHHHHHHHHCCCEEEE
Confidence 2 3699999999999999999999999987665
No 165
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=97.54 E-value=0.00017 Score=65.25 Aligned_cols=89 Identities=20% Similarity=0.224 Sum_probs=63.0
Q ss_pred CceEEEEe-cccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcC------------CccccccCcchhhh
Q 018445 2 APRIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFA------------DVECVWGDNGLEQI 68 (355)
Q Consensus 2 ~~rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~el 68 (355)
++|||||| +|..|.. .++.|.++|. ++|+.+.+++.. .+.+.+ .+| +.... ..+.++
T Consensus 7 ~~kVaIvGATGyvG~e-LlrlL~~hP~-~el~~l~S~~sa-Gk~~~~----~~p~~~~~~~~~~~~~~~v~--~~~~~~- 76 (359)
T 4dpk_A 7 TLKAAILGATGLVGIE-YVRMLSNHPY-IKPAYLAGKGSV-GKPYGE----VVRWQTVGQVPKEIADMEIK--PTDPKL- 76 (359)
T ss_dssp CEEEEETTTTSTTHHH-HHHHHTTCSS-EEEEEEEESTTT-TSBHHH----HCCCCSSSCCCHHHHTCBCE--ECCGGG-
T ss_pred CCeEEEECCCCHHHHH-HHHHHHhCCC-ceEEEEECchhc-CCChhH----hcccccccccccccccceEE--eCCHHH-
Confidence 47999999 6989987 7888888887 999999887542 222222 111 11110 012333
Q ss_pred hcCCCccEEEEecCCcccHHHHHHHHHcCCeEEE
Q 018445 69 IKEDSILGVAVVLAGQAQVDTSLKLLKAGKHVIQ 102 (355)
Q Consensus 69 l~~~~~D~V~I~tp~~~H~~~~~~al~~GkhVl~ 102 (355)
+ .++|+|+.|+|+....+++..++++|..|+-
T Consensus 77 ~--~~vDvvf~a~p~~~s~~~a~~~~~~G~~vID 108 (359)
T 4dpk_A 77 M--DDVDIIFSPLPQGAAGPVEEQFAKEGFPVIS 108 (359)
T ss_dssp C--TTCCEEEECCCTTTHHHHHHHHHHTTCEEEE
T ss_pred h--cCCCEEEECCChHHHHHHHHHHHHCCCEEEE
Confidence 2 3699999999999999999999999987665
No 166
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=97.52 E-value=0.00013 Score=68.07 Aligned_cols=114 Identities=11% Similarity=0.092 Sum_probs=70.7
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHH-hhhcCCcc----------ccccCcchhhhhc
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVA-RKHFADVE----------CVWGDNGLEQIIK 70 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~-~~~~~~~~----------~~~~~~~~~ell~ 70 (355)
.+||+|||+|.||.. ....|.+.+ .+|+ ++|+++++.+.+.+.. ..+.|++. ....++|+++.++
T Consensus 8 ~~~~~vIGlG~vG~~-~A~~La~~G--~~V~-~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~ 83 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLV-SGACFSDFG--HEVV-CVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVK 83 (446)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHTT--CEEE-EECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHT
T ss_pred ceEEEEEcCCHHHHH-HHHHHHHCC--CEEE-EEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHh
Confidence 479999999999985 666777654 4664 5699999998876510 00111111 0011278888888
Q ss_pred CCCccEEEEecCCccc----------H-HHHHHHH---HcCCeEEEecCCCCCHHHHHHHHHHhhcc
Q 018445 71 EDSILGVAVVLAGQAQ----------V-DTSLKLL---KAGKHVIQEKPAAANISEIENALSRYNSI 123 (355)
Q Consensus 71 ~~~~D~V~I~tp~~~H----------~-~~~~~al---~~GkhVl~EKP~a~~~~e~~~l~~~a~~~ 123 (355)
+ .|+|+||.|+... . +++.... +.|+ +++.|- +..+..++++.+..++.
T Consensus 84 ~--aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~-iVV~~S-Tv~pgtt~~l~~~l~e~ 146 (446)
T 4a7p_A 84 D--ADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPS-VIVTKS-TVPVGTGDEVERIIAEV 146 (446)
T ss_dssp T--CSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCC-EEEECS-CCCTTHHHHHHHHHHHH
T ss_pred c--CCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCC-EEEEeC-CCCchHHHHHHHHHHHh
Confidence 6 7999999666542 2 2222222 2344 444453 67777777777766653
No 167
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=97.51 E-value=0.0002 Score=63.97 Aligned_cols=104 Identities=20% Similarity=0.136 Sum_probs=68.8
Q ss_pred CceEEEEecccccchhccchhhhc--CCeEEEEEEEeC-CHHHHHHHHHHHhhh--c--------CC---c---c-cccc
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEI--SDLVSLKFIWSR-SEESAKSAAEVARKH--F--------AD---V---E-CVWG 61 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~--~~~~~vvai~d~-~~~~~~~~~~~~~~~--~--------~~---~---~-~~~~ 61 (355)
++||||+|.|.+|+. .++.|.++ +. ++|++|.|. +++....+.+.-+.+ + ++ + . ..+.
T Consensus 1 ~ikVgInG~G~IGr~-llR~l~~~~~p~-~eivaInd~~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~~i~v~~ 78 (337)
T 1rm4_O 1 KLKVAINGFGRIGRN-FLRCWHGRKDSP-LDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVS 78 (337)
T ss_dssp CEEEEEECCSHHHHH-HHHHHHTCSSCS-EEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEEC
T ss_pred CeEEEEECCCHHHHH-HHHHHHhCCCCC-eEEEEEEcCCCHHHHHHHhcccccCCCccceeEEecCCeEEECCeEEEEEe
Confidence 379999999999986 88888877 65 999999986 333333332200000 0 10 0 0 0000
Q ss_pred Ccchhhh-hcCCCccEEEEecCCcccHHHHHHHHHcC-CeEEEecCCC
Q 018445 62 DNGLEQI-IKEDSILGVAVVLAGQAQVDTSLKLLKAG-KHVIQEKPAA 107 (355)
Q Consensus 62 ~~~~~el-l~~~~~D~V~I~tp~~~H~~~~~~al~~G-khVl~EKP~a 107 (355)
..+.+++ ..+.++|+|+-|||...-.+.+.+.+++| |-|.+--|..
T Consensus 79 ~~dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~r 126 (337)
T 1rm4_O 79 DRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGK 126 (337)
T ss_dssp CSCGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCB
T ss_pred cCChhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEECCccc
Confidence 1244444 23236999999999999999999999999 6677776764
No 168
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=97.50 E-value=8.6e-05 Score=66.52 Aligned_cols=92 Identities=12% Similarity=0.144 Sum_probs=63.9
Q ss_pred ceEEEEe-cccccchhccchhhhcCCeEEEEEEEeCCH--HHHHHHHHHHhhhcCCccc--cccCc---chhhhhcCCCc
Q 018445 3 PRIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWSRSE--ESAKSAAEVARKHFADVEC--VWGDN---GLEQIIKEDSI 74 (355)
Q Consensus 3 ~rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d~~~--~~~~~~~~~~~~~~~~~~~--~~~~~---~~~ell~~~~~ 74 (355)
+||+|+| +|.+|.. .+..|.++++ ++++++.+++. ...+.+.+ .+|.... ..... +.+++++ ++
T Consensus 5 ~kv~IvGatG~vG~~-l~~~L~~~p~-~el~~l~s~~~~~saGk~~~~----~~p~~~~~~~~~v~~~~~~~~~~~--~~ 76 (337)
T 3dr3_A 5 LNTLIVGASGYAGAE-LVTYVNRHPH-MNITALTVSAQSNDAGKLISD----LHPQLKGIVELPLQPMSDISEFSP--GV 76 (337)
T ss_dssp EEEEEETTTSHHHHH-HHHHHHHCTT-EEEEEEEEETTCTTTTSBHHH----HCGGGTTTCCCBEEEESSGGGTCT--TC
T ss_pred eEEEEECCCChHHHH-HHHHHHhCCC-CcEEEEEecCchhhcCCchHH----hCccccCccceeEeccCCHHHHhc--CC
Confidence 6999999 6989986 7888888887 99999988762 33333332 2222111 00002 3444443 59
Q ss_pred cEEEEecCCcccHHHHHHHHHcCCeEEE
Q 018445 75 LGVAVVLAGQAQVDTSLKLLKAGKHVIQ 102 (355)
Q Consensus 75 D~V~I~tp~~~H~~~~~~al~~GkhVl~ 102 (355)
|+|+.|+|+..-.+++.+++++|..|+-
T Consensus 77 Dvvf~a~p~~~s~~~~~~~~~~g~~vID 104 (337)
T 3dr3_A 77 DVVFLATAHEVSHDLAPQFLEAGCVVFD 104 (337)
T ss_dssp SEEEECSCHHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEECCChHHHHHHHHHHHHCCCEEEE
Confidence 9999999999999999999999976554
No 169
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=97.49 E-value=6.3e-05 Score=67.65 Aligned_cols=78 Identities=21% Similarity=0.249 Sum_probs=56.9
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcC--CCccEEEEe
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKE--DSILGVAVV 80 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~--~~~D~V~I~ 80 (355)
.||||||+|.||.. +...|.+.+ .+| .++|+++++++.+.+ . ++... +++++++++ .+.|+|+++
T Consensus 9 ~kIgIIG~G~mG~s-lA~~L~~~G--~~V-~~~dr~~~~~~~a~~----~--G~~~~---~~~~e~~~~a~~~aDlVila 75 (341)
T 3ktd_A 9 RPVCILGLGLIGGS-LLRDLHAAN--HSV-FGYNRSRSGAKSAVD----E--GFDVS---ADLEATLQRAAAEDALIVLA 75 (341)
T ss_dssp SCEEEECCSHHHHH-HHHHHHHTT--CCE-EEECSCHHHHHHHHH----T--TCCEE---SCHHHHHHHHHHTTCEEEEC
T ss_pred CEEEEEeecHHHHH-HHHHHHHCC--CEE-EEEeCCHHHHHHHHH----c--CCeee---CCHHHHHHhcccCCCEEEEe
Confidence 59999999999986 788888765 455 577999998887654 2 33222 788888874 247999999
Q ss_pred cCCcccHHHHHHH
Q 018445 81 LAGQAQVDTSLKL 93 (355)
Q Consensus 81 tp~~~H~~~~~~a 93 (355)
+|+..-.+++...
T Consensus 76 vP~~~~~~vl~~l 88 (341)
T 3ktd_A 76 VPMTAIDSLLDAV 88 (341)
T ss_dssp SCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 9986555555443
No 170
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=97.48 E-value=0.00056 Score=59.94 Aligned_cols=102 Identities=14% Similarity=0.129 Sum_probs=64.1
Q ss_pred CCc-eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhc-------------------CCccccc
Q 018445 1 MAP-RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHF-------------------ADVECVW 60 (355)
Q Consensus 1 m~~-rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~-------------------~~~~~~~ 60 (355)
|.+ ||+|||+|.||.. ....+...+ .+| .++|+++++++.+.+...+.. ..+..
T Consensus 2 m~~~kV~VIGaG~mG~~-iA~~la~~G--~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-- 75 (283)
T 4e12_A 2 TGITNVTVLGTGVLGSQ-IAFQTAFHG--FAV-TAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-- 75 (283)
T ss_dssp CSCCEEEEECCSHHHHH-HHHHHHHTT--CEE-EEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE--
T ss_pred CCCCEEEEECCCHHHHH-HHHHHHhCC--CeE-EEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE--
Confidence 454 8999999999985 677777654 566 457999999887765321110 01111
Q ss_pred cCcchhhhhcCCCccEEEEecCCc--ccHHHHHHHHHcC--CeEEEecCCCCCHH
Q 018445 61 GDNGLEQIIKEDSILGVAVVLAGQ--AQVDTSLKLLKAG--KHVIQEKPAAANIS 111 (355)
Q Consensus 61 ~~~~~~ell~~~~~D~V~I~tp~~--~H~~~~~~al~~G--khVl~EKP~a~~~~ 111 (355)
.+++++.+++ .|+|++++|.. ....+..+..+.- ..+++----+.+..
T Consensus 76 -~~~~~~~~~~--aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~ 127 (283)
T 4e12_A 76 -SDDLAQAVKD--ADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPS 127 (283)
T ss_dssp -ESCHHHHTTT--CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH
T ss_pred -eCCHHHHhcc--CCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHH
Confidence 2788888876 89999999997 4445554443321 23555433334443
No 171
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=97.48 E-value=9.7e-05 Score=62.06 Aligned_cols=68 Identities=19% Similarity=0.260 Sum_probs=50.1
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
.+||+|||+|.+|.. +...|.+.+ .+| .++|+++++++.+.+ . ++. . .++++++++ .|+|++++
T Consensus 28 ~~~I~iiG~G~~G~~-la~~l~~~g--~~V-~~~~r~~~~~~~~~~----~--g~~--~--~~~~~~~~~--~DvVi~av 91 (215)
T 2vns_A 28 APKVGILGSGDFARS-LATRLVGSG--FKV-VVGSRNPKRTARLFP----S--AAQ--V--TFQEEAVSS--PEVIFVAV 91 (215)
T ss_dssp -CCEEEECCSHHHHH-HHHHHHHTT--CCE-EEEESSHHHHHHHSB----T--TSE--E--EEHHHHTTS--CSEEEECS
T ss_pred CCEEEEEccCHHHHH-HHHHHHHCC--CEE-EEEeCCHHHHHHHHH----c--CCc--e--ecHHHHHhC--CCEEEECC
Confidence 369999999999985 788887654 455 468999988776543 1 332 1 377888765 89999999
Q ss_pred CCcc
Q 018445 82 AGQA 85 (355)
Q Consensus 82 p~~~ 85 (355)
|+..
T Consensus 92 ~~~~ 95 (215)
T 2vns_A 92 FREH 95 (215)
T ss_dssp CGGG
T ss_pred ChHH
Confidence 9754
No 172
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=97.47 E-value=4.1e-05 Score=66.35 Aligned_cols=75 Identities=11% Similarity=0.160 Sum_probs=53.9
Q ss_pred CC-ceEEEEecccccchhccchhhhcCC--eEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEE
Q 018445 1 MA-PRIAILGAGIFVKTQYIPRLAEISD--LVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGV 77 (355)
Q Consensus 1 m~-~rigiiG~G~~~~~~~~~~l~~~~~--~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V 77 (355)
|. |||||||+|.||.. +...|.+.+. ..+| .++|+++++ . ++... ++.++++++ .|+|
T Consensus 2 m~~m~i~iiG~G~mG~~-~a~~l~~~g~~~~~~v-~~~~~~~~~----------~--g~~~~---~~~~~~~~~--~D~v 62 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGSA-LAHGIANANIIKKENL-FYYGPSKKN----------T--TLNYM---SSNEELARH--CDII 62 (262)
T ss_dssp CSSSCEEEECCSHHHHH-HHHHHHHHTSSCGGGE-EEECSSCCS----------S--SSEEC---SCHHHHHHH--CSEE
T ss_pred CCCCEEEEECcCHHHHH-HHHHHHHCCCCCCCeE-EEEeCCccc----------C--ceEEe---CCHHHHHhc--CCEE
Confidence 44 79999999999985 7777776541 0133 578998776 1 44322 678888875 8999
Q ss_pred EEecCCcccHHHHHHHH
Q 018445 78 AVVLAGQAQVDTSLKLL 94 (355)
Q Consensus 78 ~I~tp~~~H~~~~~~al 94 (355)
++++|+....+++....
T Consensus 63 i~~v~~~~~~~v~~~l~ 79 (262)
T 2rcy_A 63 VCAVKPDIAGSVLNNIK 79 (262)
T ss_dssp EECSCTTTHHHHHHHSG
T ss_pred EEEeCHHHHHHHHHHHH
Confidence 99999887777776543
No 173
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=97.46 E-value=0.00011 Score=65.50 Aligned_cols=104 Identities=19% Similarity=0.183 Sum_probs=68.3
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeC-CHHHHHHHHHHHhhh--cCCccc--------------cccCc
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSR-SEESAKSAAEVARKH--FADVEC--------------VWGDN 63 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~-~~~~~~~~~~~~~~~--~~~~~~--------------~~~~~ 63 (355)
|++||||.|.|+||+. .++.+...++ ++|++|-|. +++....+.+.=.-+ +++... .+...
T Consensus 1 m~ikV~InGfGrIGr~-v~r~l~~~~~-~evvaInd~~~~~~~a~ll~yDs~hG~~~~~v~~~~~~l~v~Gk~i~v~~~~ 78 (342)
T 2ep7_A 1 MAIKVGINGFGRIGRS-FFRASWGREE-IEIVAINDLTDAKHLAHLLKYDSVHGIFKGSVEAKDDSIVVDGKEIKVFAQK 78 (342)
T ss_dssp --CEEEEECCSHHHHH-HHHHHTTCTT-CEEEEEECSSCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEEEECCS
T ss_pred CceEEEEECCCHHHHH-HHHHHHhCCC-ceEEEEecCCChHHHhhhhhcccccccCCCcEEEcCCEEEECCEEEEEEEcC
Confidence 7899999999999986 8888877665 999999996 555444433210001 111100 00001
Q ss_pred chhhh-hcCCCccEEEEecCCcccHHHHHHHHHcC-CeEEEecCC
Q 018445 64 GLEQI-IKEDSILGVAVVLAGQAQVDTSLKLLKAG-KHVIQEKPA 106 (355)
Q Consensus 64 ~~~el-l~~~~~D~V~I~tp~~~H~~~~~~al~~G-khVl~EKP~ 106 (355)
+.+++ ..+.++|+|+=||+...-.+.+...+++| |.|++--|-
T Consensus 79 dp~~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps 123 (342)
T 2ep7_A 79 DPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPA 123 (342)
T ss_dssp SGGGCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCC
T ss_pred ChhhCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCC
Confidence 22222 11226999999999999999999999999 678888774
No 174
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=97.44 E-value=0.00036 Score=65.82 Aligned_cols=112 Identities=13% Similarity=0.096 Sum_probs=66.8
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHh-hhcCCcc----------ccccCcchhhhhc
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVAR-KHFADVE----------CVWGDNGLEQIIK 70 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~-~~~~~~~----------~~~~~~~~~ell~ 70 (355)
.|||+|||+|.+|.. ....|.+.+ .+| -++|+++++.+.+.+... .+.|++. ....++|+++.++
T Consensus 8 ~~~I~VIG~G~vG~~-lA~~la~~G--~~V-~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~ 83 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLV-TGACLADIG--HDV-FCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVA 83 (478)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHTT--CEE-EEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHH
T ss_pred CceEEEECcCHHHHH-HHHHHHhCC--CEE-EEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhh
Confidence 589999999999985 666676654 465 456999999988765100 0012210 0011267777777
Q ss_pred CCCccEEEEecCCc----------ccHHHHHHHHHc--CCeEEEecCCCCCHHHHHHHHHHh
Q 018445 71 EDSILGVAVVLAGQ----------AQVDTSLKLLKA--GKHVIQEKPAAANISEIENALSRY 120 (355)
Q Consensus 71 ~~~~D~V~I~tp~~----------~H~~~~~~al~~--GkhVl~EKP~a~~~~e~~~l~~~a 120 (355)
+ .|+|+||+|+. .-.+++....+. .-.+++.|= +..+..++++.+..
T Consensus 84 ~--aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~S-Tv~~gt~~~l~~~l 142 (478)
T 2y0c_A 84 H--GDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKS-TVPVGTAERVRAAV 142 (478)
T ss_dssp H--CSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHH
T ss_pred c--CCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeC-CcCCCchHHHHHHH
Confidence 5 89999999883 333333333221 124566664 55455555554443
No 175
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=97.44 E-value=0.00042 Score=61.96 Aligned_cols=79 Identities=6% Similarity=0.016 Sum_probs=55.2
Q ss_pred CceEEEEecccccchhccchhhhcCC--eEEEEEEEeCCHH--HHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEE
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISD--LVSLKFIWSRSEE--SAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGV 77 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~--~~~vvai~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V 77 (355)
.|||||||+|.||.. +...|.+.+. ..+| .+++++++ +++.+.+ . ++... ++..+++++ .|+|
T Consensus 22 ~mkI~iIG~G~mG~a-la~~L~~~G~~~~~~V-~v~~r~~~~~~~~~l~~----~--G~~~~---~~~~e~~~~--aDvV 88 (322)
T 2izz_A 22 SMSVGFIGAGQLAFA-LAKGFTAAGVLAAHKI-MASSPDMDLATVSALRK----M--GVKLT---PHNKETVQH--SDVL 88 (322)
T ss_dssp CCCEEEESCSHHHHH-HHHHHHHTTSSCGGGE-EEECSCTTSHHHHHHHH----H--TCEEE---SCHHHHHHH--CSEE
T ss_pred CCEEEEECCCHHHHH-HHHHHHHCCCCCcceE-EEECCCccHHHHHHHHH----c--CCEEe---CChHHHhcc--CCEE
Confidence 369999999999985 7778876540 0244 57799986 6666643 2 44322 577888775 8999
Q ss_pred EEecCCcccHHHHHHH
Q 018445 78 AVVLAGQAQVDTSLKL 93 (355)
Q Consensus 78 ~I~tp~~~H~~~~~~a 93 (355)
++++|+..-.+++...
T Consensus 89 ilav~~~~~~~vl~~l 104 (322)
T 2izz_A 89 FLAVKPHIIPFILDEI 104 (322)
T ss_dssp EECSCGGGHHHHHHHH
T ss_pred EEEeCHHHHHHHHHHH
Confidence 9999977666665543
No 176
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.41 E-value=0.00038 Score=53.66 Aligned_cols=91 Identities=18% Similarity=0.100 Sum_probs=56.3
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCcccccc-Ccchhhhhc--CCCccEEEE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWG-DNGLEQIIK--EDSILGVAV 79 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ell~--~~~~D~V~I 79 (355)
|+|+|||+|.+|.. +...|.+.+ .+|+ ++|+++++.+.+.+ +. ++....+ .++.+.+.+ -.+.|+|++
T Consensus 5 m~i~IiG~G~iG~~-~a~~L~~~g--~~v~-~~d~~~~~~~~~~~---~~--~~~~~~~d~~~~~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 5 MYIIIAGIGRVGYT-LAKSLSEKG--HDIV-LIDIDKDICKKASA---EI--DALVINGDCTKIKTLEDAGIEDADMYIA 75 (140)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CEEE-EEESCHHHHHHHHH---HC--SSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred CEEEEECCCHHHHH-HHHHHHhCC--CeEE-EEECCHHHHHHHHH---hc--CcEEEEcCCCCHHHHHHcCcccCCEEEE
Confidence 68999999999985 778887654 5654 56999988877654 22 2211111 134444432 246899999
Q ss_pred ecCCcccHHHHHHHH-HcC-CeEEE
Q 018445 80 VLAGQAQVDTSLKLL-KAG-KHVIQ 102 (355)
Q Consensus 80 ~tp~~~H~~~~~~al-~~G-khVl~ 102 (355)
++|+......+..++ +.+ +++++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~ii~ 100 (140)
T 1lss_A 76 VTGKEEVNLMSSLLAKSYGINKTIA 100 (140)
T ss_dssp CCSCHHHHHHHHHHHHHTTCCCEEE
T ss_pred eeCCchHHHHHHHHHHHcCCCEEEE
Confidence 999875444333333 334 34554
No 177
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=97.39 E-value=0.00013 Score=66.07 Aligned_cols=101 Identities=17% Similarity=0.187 Sum_probs=64.9
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHh--hhcCCccc---cccCcchhhhhcCCCccE
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVAR--KHFADVEC---VWGDNGLEQIIKEDSILG 76 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~ell~~~~~D~ 76 (355)
.|||+|||+|.||.. ....|.+.+ .+| -++++++++.+.+.+... .+.|+... ...++|+++.+++ .|+
T Consensus 29 ~mkI~VIGaG~mG~a-lA~~La~~G--~~V-~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~--aDv 102 (356)
T 3k96_A 29 KHPIAILGAGSWGTA-LALVLARKG--QKV-RLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEG--VTD 102 (356)
T ss_dssp CSCEEEECCSHHHHH-HHHHHHTTT--CCE-EEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTT--CCE
T ss_pred CCeEEEECccHHHHH-HHHHHHHCC--CeE-EEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhc--CCE
Confidence 469999999999985 777777665 344 478999999888776311 12333210 0012688888876 899
Q ss_pred EEEecCCcccHHHHHHHHH---cCCe-EEEecCCCC
Q 018445 77 VAVVLAGQAQVDTSLKLLK---AGKH-VIQEKPAAA 108 (355)
Q Consensus 77 V~I~tp~~~H~~~~~~al~---~Gkh-Vl~EKP~a~ 108 (355)
|++++|+....+++..... .+.. |.+-|.+..
T Consensus 103 VilaVp~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~ 138 (356)
T 3k96_A 103 ILIVVPSFAFHEVITRMKPLIDAKTRIAWGTKGLAK 138 (356)
T ss_dssp EEECCCHHHHHHHHHHHGGGCCTTCEEEECCCSCBT
T ss_pred EEECCCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCc
Confidence 9999998755555544322 2322 445665543
No 178
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=97.38 E-value=0.00035 Score=62.30 Aligned_cols=102 Identities=17% Similarity=0.115 Sum_probs=69.7
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeC-CHHHHHHHHHHHhhhc--CC--------c-----cccc-cCcch
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSR-SEESAKSAAEVARKHF--AD--------V-----ECVW-GDNGL 65 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~-~~~~~~~~~~~~~~~~--~~--------~-----~~~~-~~~~~ 65 (355)
+||||+|.|++|+. .++.+.++ + ++|++|-|. +++....+.+.-+.++ ++ + .... ...+.
T Consensus 1 ikVgInG~G~IGr~-vlr~l~~~-~-~evvaind~~~~~~~a~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp 77 (331)
T 2g82_O 1 MKVGINGFGRIGRQ-VFRILHSR-G-VEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDP 77 (331)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHH-T-CCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred CEEEEECcCHHHHH-HHHHHHhC-C-CEEEEEecCCCHHHHhHhhhccccCCCCCceEEEcCCEEEECCEEEEEEecCCh
Confidence 59999999999986 88888776 4 999999997 5555544432100011 00 0 0000 00144
Q ss_pred hhh-hcCCCccEEEEecCCcccHHHHHHHHHcC-CeEEEecCCC
Q 018445 66 EQI-IKEDSILGVAVVLAGQAQVDTSLKLLKAG-KHVIQEKPAA 107 (355)
Q Consensus 66 ~el-l~~~~~D~V~I~tp~~~H~~~~~~al~~G-khVl~EKP~a 107 (355)
+++ ..+.++|+|+-|||...-.+.+.+.+++| |.|++.-|-.
T Consensus 78 ~~l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~ 121 (331)
T 2g82_O 78 KEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAK 121 (331)
T ss_dssp GGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB
T ss_pred hhCcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCc
Confidence 444 23347999999999999999999999999 7788887754
No 179
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=97.35 E-value=0.00026 Score=63.57 Aligned_cols=83 Identities=18% Similarity=0.169 Sum_probs=55.6
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeC--CHHHHHHHHHHHhhhcCCcc----ccccCc--chhhhhcCCCc
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSR--SEESAKSAAEVARKHFADVE----CVWGDN--GLEQIIKEDSI 74 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~--~~~~~~~~~~~~~~~~~~~~----~~~~~~--~~~ell~~~~~ 74 (355)
|||+|||+|.||.. +...|.+.+ .+| .++|+ ++++.+.+.+......-+.. .. ++ ++++.+++ .
T Consensus 1 m~I~iiG~G~mG~~-~a~~L~~~g--~~V-~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~ 72 (335)
T 1txg_A 1 MIVSILGAGAMGSA-LSVPLVDNG--NEV-RIWGTEFDTEILKSISAGREHPRLGVKLNGVEI--FWPEQLEKCLEN--A 72 (335)
T ss_dssp CEEEEESCCHHHHH-HHHHHHHHC--CEE-EEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEE--ECGGGHHHHHTT--C
T ss_pred CEEEEECcCHHHHH-HHHHHHhCC--CeE-EEEEccCCHHHHHHHHHhCcCcccCccccceEE--ecHHhHHHHHhc--C
Confidence 58999999999985 777787655 355 46788 88888776541100000100 11 14 67777664 8
Q ss_pred cEEEEecCCcccHHHHHHH
Q 018445 75 LGVAVVLAGQAQVDTSLKL 93 (355)
Q Consensus 75 D~V~I~tp~~~H~~~~~~a 93 (355)
|+|++++|+..+.+++...
T Consensus 73 D~vi~~v~~~~~~~v~~~i 91 (335)
T 1txg_A 73 EVVLLGVSTDGVLPVMSRI 91 (335)
T ss_dssp SEEEECSCGGGHHHHHHHH
T ss_pred CEEEEcCChHHHHHHHHHH
Confidence 9999999999877776654
No 180
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.34 E-value=0.00025 Score=60.92 Aligned_cols=95 Identities=15% Similarity=0.050 Sum_probs=65.0
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCH-------------------HHHHHHHHHHhhhcCCccccccC-
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSE-------------------ESAKSAAEVARKHFADVECVWGD- 62 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~- 62 (355)
.||.|||+|.+|.. .+..|.+.+ +.-+.++|++. .+++.++++..+..|.+......
T Consensus 32 ~~VlVvG~Gg~G~~-va~~La~~G--v~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~ 108 (249)
T 1jw9_B 32 SRVLIVGLGGLGCA-ASQYLASAG--VGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA 108 (249)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHT--CSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred CeEEEEeeCHHHHH-HHHHHHHcC--CCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec
Confidence 48999999999985 788887765 43346779988 78888887766665665322110
Q ss_pred ----cchhhhhcCCCccEEEEecCCc-ccHHHHHHHHHcCCeEEE
Q 018445 63 ----NGLEQIIKEDSILGVAVVLAGQ-AQVDTSLKLLKAGKHVIQ 102 (355)
Q Consensus 63 ----~~~~ell~~~~~D~V~I~tp~~-~H~~~~~~al~~GkhVl~ 102 (355)
.++++++++ .|+|+.+|++. ....+...|.+.|++++.
T Consensus 109 ~~~~~~~~~~~~~--~DvVi~~~d~~~~~~~l~~~~~~~~~p~i~ 151 (249)
T 1jw9_B 109 LLDDAELAALIAE--HDLVLDCTDNVAVRNQLNAGCFAAKVPLVS 151 (249)
T ss_dssp CCCHHHHHHHHHT--SSEEEECCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred cCCHhHHHHHHhC--CCEEEEeCCCHHHHHHHHHHHHHcCCCEEE
Confidence 245567765 89999999875 334455566677776555
No 181
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=97.32 E-value=0.00031 Score=62.43 Aligned_cols=90 Identities=12% Similarity=-0.036 Sum_probs=54.4
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhc--CCc-cccccCcchhhhhcC-CCccE
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHF--ADV-ECVWGDNGLEQIIKE-DSILG 76 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~ell~~-~~~D~ 76 (355)
|.|||+|||+|.+|.. +...|.+.+ .+| .++|+++++.+.+.+..-... ++. .......+.+++.+. .+.|+
T Consensus 2 ~~m~i~iiG~G~~G~~-~a~~l~~~g--~~V-~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 77 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSR-LGIMLHQGG--NDV-TLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDL 77 (316)
T ss_dssp --CEEEEECCSHHHHH-HHHHHHHTT--CEE-EEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSE
T ss_pred CCCeEEEECcCHHHHH-HHHHHHhCC--CcE-EEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCE
Confidence 4479999999999985 777777654 465 467999999888765210000 000 000000233444331 25899
Q ss_pred EEEecCCcccHHHHHHHH
Q 018445 77 VAVVLAGQAQVDTSLKLL 94 (355)
Q Consensus 77 V~I~tp~~~H~~~~~~al 94 (355)
|++++|+....+++....
T Consensus 78 vi~~v~~~~~~~v~~~l~ 95 (316)
T 2ew2_A 78 IIALTKAQQLDAMFKAIQ 95 (316)
T ss_dssp EEECSCHHHHHHHHHHHG
T ss_pred EEEEeccccHHHHHHHHH
Confidence 999999987766665543
No 182
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=97.31 E-value=4.1e-05 Score=68.98 Aligned_cols=90 Identities=18% Similarity=0.161 Sum_probs=60.4
Q ss_pred CCceEEEEe-cccccchhccchhh--hcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEE
Q 018445 1 MAPRIAILG-AGIFVKTQYIPRLA--EISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGV 77 (355)
Q Consensus 1 m~~rigiiG-~G~~~~~~~~~~l~--~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V 77 (355)
|++||+|+| +|.+|+. .++.|. .++. ++++++.+++.... .+ .+.+....+...+.++ + .++|+|
T Consensus 5 m~~kV~IiGAtG~iG~~-llr~L~~~~~~~-~elv~i~s~~~~g~-~~------~~~g~~i~~~~~~~~~-~--~~~DvV 72 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEA-LVGLLDERDFPL-HRLHLLASAESAGQ-RM------GFAESSLRVGDVDSFD-F--SSVGLA 72 (340)
T ss_dssp CCCCEEEETTTSHHHHH-HHHHHHHTTCCC-SCEEEEECTTTTTC-EE------EETTEEEECEEGGGCC-G--GGCSEE
T ss_pred CCcEEEEECCCCHHHHH-HHHHHHhCCCCc-EEEEEEecCCCCCC-cc------ccCCcceEEecCCHHH-h--cCCCEE
Confidence 468999999 8999986 788877 5565 89999988642210 00 0111111110012222 3 359999
Q ss_pred EEecCCcccHHHHHHHHHcCCeEEE
Q 018445 78 AVVLAGQAQVDTSLKLLKAGKHVIQ 102 (355)
Q Consensus 78 ~I~tp~~~H~~~~~~al~~GkhVl~ 102 (355)
+.|+|...+.+++..++++|..|+.
T Consensus 73 ~~a~g~~~s~~~a~~~~~aG~kvId 97 (340)
T 2hjs_A 73 FFAAAAEVSRAHAERARAAGCSVID 97 (340)
T ss_dssp EECSCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEcCCcHHHHHHHHHHHHCCCEEEE
Confidence 9999999999999999999976654
No 183
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=97.30 E-value=0.00038 Score=65.38 Aligned_cols=106 Identities=15% Similarity=0.096 Sum_probs=61.8
Q ss_pred ceEEEEecccccchhccchhhhcCCeE-EEEEEEeCCHH----HHHHHHHHHhh----hcCCc----------cccccCc
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLV-SLKFIWSRSEE----SAKSAAEVARK----HFADV----------ECVWGDN 63 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~-~vvai~d~~~~----~~~~~~~~~~~----~~~~~----------~~~~~~~ 63 (355)
+||+|||+|.+|.. ....|.+.++ . +|+ ++|++++ +.+.+.+- .. +.|+. .....++
T Consensus 19 mkIaVIGlG~mG~~-lA~~la~~~G-~~~V~-~~D~~~~~~~~kv~~l~~g-~~~i~~~e~gl~~l~~~~~~~g~l~~tt 94 (478)
T 3g79_A 19 KKIGVLGMGYVGIP-AAVLFADAPC-FEKVL-GFQRNSKSSGYKIEMLNRG-ESPLKGEEPGLEELIGKVVKAGKFECTP 94 (478)
T ss_dssp CEEEEECCSTTHHH-HHHHHHHSTT-CCEEE-EECCCCTTTTTHHHHHTTT-CCCSSCCGGGHHHHHHHHHHTTCEEEES
T ss_pred CEEEEECcCHHHHH-HHHHHHHhCC-CCeEE-EEECChhHhHHHHHHHHhc-CCCccccCCCHHHHHHhhcccCCeEEeC
Confidence 59999999999985 6677776633 5 664 5799999 77776530 00 11110 0011124
Q ss_pred chhhhhcCCCccEEEEecCCccc--------HHH-------HHHHHHcCCeEEEecCCCCCHHHHHHHH
Q 018445 64 GLEQIIKEDSILGVAVVLAGQAQ--------VDT-------SLKLLKAGKHVIQEKPAAANISEIENAL 117 (355)
Q Consensus 64 ~~~ell~~~~~D~V~I~tp~~~H--------~~~-------~~~al~~GkhVl~EKP~a~~~~e~~~l~ 117 (355)
+ .+.+++ .|+|++++|+... .+. +...++.|+-|..++ +..+..++++.
T Consensus 95 d-~ea~~~--aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S--Tv~pgtt~~v~ 158 (478)
T 3g79_A 95 D-FSRISE--LDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLES--TITPGTTEGMA 158 (478)
T ss_dssp C-GGGGGG--CSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECS--CCCTTTTTTHH
T ss_pred c-HHHHhc--CCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeC--CCChHHHHHHH
Confidence 5 456665 7999999888742 122 223344566566665 44444444444
No 184
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=97.30 E-value=4.7e-05 Score=68.48 Aligned_cols=89 Identities=20% Similarity=0.181 Sum_probs=61.2
Q ss_pred CceEEEEe-cccccchhccchhhhcC-CeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhh-hhcCCCccEEE
Q 018445 2 APRIAILG-AGIFVKTQYIPRLAEIS-DLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQ-IIKEDSILGVA 78 (355)
Q Consensus 2 ~~rigiiG-~G~~~~~~~~~~l~~~~-~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e-ll~~~~~D~V~ 78 (355)
.+||||+| +|.+|+. .++.|.+++ +.++++++.+++... +.. .+.+....+ .+.+. .+ .++|+|+
T Consensus 3 ~~kV~I~GAtG~iG~~-llr~L~~~~~p~~elv~i~s~~~~G-~~~------~~~~~~i~~--~~~~~~~~--~~vDvVf 70 (336)
T 2r00_A 3 QFNVAIFGATGAVGET-MLEVLQEREFPVDELFLLASERSEG-KTY------RFNGKTVRV--QNVEEFDW--SQVHIAL 70 (336)
T ss_dssp CEEEEEETTTSHHHHH-HHHHHHHTTCCEEEEEEEECTTTTT-CEE------EETTEEEEE--EEGGGCCG--GGCSEEE
T ss_pred ccEEEEECCCCHHHHH-HHHHHhcCCCCCEEEEEEECCCCCC-Cce------eecCceeEE--ecCChHHh--cCCCEEE
Confidence 47999999 9999986 788888762 349999999864221 000 011111111 22221 22 3599999
Q ss_pred EecCCcccHHHHHHHHHcCCeEEE
Q 018445 79 VVLAGQAQVDTSLKLLKAGKHVIQ 102 (355)
Q Consensus 79 I~tp~~~H~~~~~~al~~GkhVl~ 102 (355)
.|+|...+.+.+..++++|..|+.
T Consensus 71 ~a~g~~~s~~~a~~~~~~G~~vId 94 (336)
T 2r00_A 71 FSAGGELSAKWAPIAAEAGVVVID 94 (336)
T ss_dssp ECSCHHHHHHHHHHHHHTTCEEEE
T ss_pred ECCCchHHHHHHHHHHHcCCEEEE
Confidence 999999999999999999986655
No 185
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.26 E-value=0.00097 Score=54.20 Aligned_cols=101 Identities=16% Similarity=0.127 Sum_probs=61.5
Q ss_pred ceEEEEecccccchhccchhhhc-CCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccC-cchhhhhc---CCCccEE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEI-SDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGD-NGLEQIIK---EDSILGV 77 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~-~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ell~---~~~~D~V 77 (355)
.+|+|+|+|.+|.. ....|.+. + .+|+ ++|+++++.+.+.+ . +....++. ++.+.+.+ -.+.|+|
T Consensus 40 ~~v~IiG~G~~G~~-~a~~L~~~~g--~~V~-vid~~~~~~~~~~~----~--g~~~~~gd~~~~~~l~~~~~~~~ad~v 109 (183)
T 3c85_A 40 AQVLILGMGRIGTG-AYDELRARYG--KISL-GIEIREEAAQQHRS----E--GRNVISGDATDPDFWERILDTGHVKLV 109 (183)
T ss_dssp CSEEEECCSHHHHH-HHHHHHHHHC--SCEE-EEESCHHHHHHHHH----T--TCCEEECCTTCHHHHHTBCSCCCCCEE
T ss_pred CcEEEECCCHHHHH-HHHHHHhccC--CeEE-EEECCHHHHHHHHH----C--CCCEEEcCCCCHHHHHhccCCCCCCEE
Confidence 48999999999985 77777765 4 4554 55999999887654 2 33222211 23332221 2358999
Q ss_pred EEecCCcccHHHHHHHHHc-C--CeEEEecCCCCCHHHHHHH
Q 018445 78 AVVLAGQAQVDTSLKLLKA-G--KHVIQEKPAAANISEIENA 116 (355)
Q Consensus 78 ~I~tp~~~H~~~~~~al~~-G--khVl~EKP~a~~~~e~~~l 116 (355)
++++|+..-...+...++. | ..|++. +.+.+..+.+
T Consensus 110 i~~~~~~~~~~~~~~~~~~~~~~~~ii~~---~~~~~~~~~l 148 (183)
T 3c85_A 110 LLAMPHHQGNQTALEQLQRRNYKGQIAAI---AEYPDQLEGL 148 (183)
T ss_dssp EECCSSHHHHHHHHHHHHHTTCCSEEEEE---ESSHHHHHHH
T ss_pred EEeCCChHHHHHHHHHHHHHCCCCEEEEE---ECCHHHHHHH
Confidence 9999986554444444444 3 356553 4555555433
No 186
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=97.25 E-value=0.00037 Score=64.45 Aligned_cols=106 Identities=15% Similarity=0.063 Sum_probs=64.8
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEe---CCHHHHHHHHHHHh---h--hcCC--cc----ccccCcchh
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWS---RSEESAKSAAEVAR---K--HFAD--VE----CVWGDNGLE 66 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d---~~~~~~~~~~~~~~---~--~~~~--~~----~~~~~~~~~ 66 (355)
|.|||+|||+|.||.. +...|.+..+ .+|+ +++ +++++.+.+.+... . ..++ .. ....+++++
T Consensus 1 ~~mkI~ViGaG~~G~~-~a~~La~~~G-~~V~-~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (404)
T 3c7a_A 1 MTVKVCVCGGGNGAHT-LSGLAASRDG-VEVR-VLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPE 77 (404)
T ss_dssp -CEEEEEECCSHHHHH-HHHHHTTSTT-EEEE-EECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHH
T ss_pred CCceEEEECCCHHHHH-HHHHHHhCCC-CEEE-EEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHH
Confidence 6789999999999975 6666655323 5664 567 77777766432100 0 0011 10 000126788
Q ss_pred hhhcCCCccEEEEecCCcccHHHHHHHHHc--CCeEEEecCCCCCHH
Q 018445 67 QIIKEDSILGVAVVLAGQAQVDTSLKLLKA--GKHVIQEKPAAANIS 111 (355)
Q Consensus 67 ell~~~~~D~V~I~tp~~~H~~~~~~al~~--GkhVl~EKP~a~~~~ 111 (355)
+.+++ .|+|++++|+..+.+++...... ...+++-.|.+...+
T Consensus 78 ~a~~~--aD~Vilav~~~~~~~v~~~l~~~l~~~~ivv~~~~~~G~~ 122 (404)
T 3c7a_A 78 IAISG--ADVVILTVPAFAHEGYFQAMAPYVQDSALIVGLPSQAGFE 122 (404)
T ss_dssp HHHTT--CSEEEECSCGGGHHHHHHHHTTTCCTTCEEEETTCCTTHH
T ss_pred HHhCC--CCEEEEeCchHHHHHHHHHHHhhCCCCcEEEEcCCCccHH
Confidence 87765 89999999999988777664332 124666666555533
No 187
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=97.23 E-value=0.00037 Score=62.15 Aligned_cols=74 Identities=12% Similarity=0.247 Sum_probs=52.4
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh---------cCC----------ccccccCcc
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH---------FAD----------VECVWGDNG 64 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~---------~~~----------~~~~~~~~~ 64 (355)
||||||+|.||.. ....+.+.+ ++| -++|+++++++.+.+..++. .++ +. . ++|
T Consensus 8 kI~vIGaG~MG~~-iA~~la~~G--~~V-~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~-~--~~~ 80 (319)
T 2dpo_A 8 DVLIVGSGLVGRS-WAMLFASGG--FRV-KLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLIS-S--CTN 80 (319)
T ss_dssp EEEEECCSHHHHH-HHHHHHHTT--CCE-EEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEE-E--ECC
T ss_pred eEEEEeeCHHHHH-HHHHHHHCC--CEE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceE-E--eCC
Confidence 8999999999986 666676654 565 56799999988875432111 011 11 1 278
Q ss_pred hhhhhcCCCccEEEEecCCccc
Q 018445 65 LEQIIKEDSILGVAVVLAGQAQ 86 (355)
Q Consensus 65 ~~ell~~~~~D~V~I~tp~~~H 86 (355)
+++.+++ .|+|+.++|....
T Consensus 81 ~~eav~~--aDlVieavpe~~~ 100 (319)
T 2dpo_A 81 LAEAVEG--VVHIQECVPENLD 100 (319)
T ss_dssp HHHHTTT--EEEEEECCCSCHH
T ss_pred HHHHHhc--CCEEEEeccCCHH
Confidence 8888876 8999999998754
No 188
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=97.21 E-value=0.00022 Score=65.21 Aligned_cols=88 Identities=15% Similarity=0.158 Sum_probs=54.8
Q ss_pred CCceEEEEecccccchhccchhhhcCC-----eEEEEEEEeCCHH-----HHHHHHHHHh--hhcCCcc---ccccCcch
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISD-----LVSLKFIWSRSEE-----SAKSAAEVAR--KHFADVE---CVWGDNGL 65 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~-----~~~vvai~d~~~~-----~~~~~~~~~~--~~~~~~~---~~~~~~~~ 65 (355)
|.+||+|||+|.||.. ....|.+.+. ..+| .+++++++ +++.+.+... .+.++.. ....++|+
T Consensus 20 ~~~kI~iIGaG~mG~a-lA~~L~~~G~~~~~~~~~V-~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 97 (375)
T 1yj8_A 20 GPLKISILGSGNWASA-ISKVVGTNAKNNYLFENEV-RMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDL 97 (375)
T ss_dssp SCBCEEEECCSHHHHH-HHHHHHHHHHHCTTBCSCE-EEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESST
T ss_pred CCCEEEEECcCHHHHH-HHHHHHHcCCccCCCCCeE-EEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCH
Confidence 5579999999999985 7777765430 0233 56789888 7776654210 1112210 00012678
Q ss_pred hhhhcCCCccEEEEecCCcccHHHHHH
Q 018445 66 EQIIKEDSILGVAVVLAGQAQVDTSLK 92 (355)
Q Consensus 66 ~ell~~~~~D~V~I~tp~~~H~~~~~~ 92 (355)
++.+++ .|+|++++|+....+++..
T Consensus 98 ~ea~~~--aDvVilav~~~~~~~vl~~ 122 (375)
T 1yj8_A 98 ASVIND--ADLLIFIVPCQYLESVLAS 122 (375)
T ss_dssp HHHHTT--CSEEEECCCHHHHHHHHHH
T ss_pred HHHHcC--CCEEEEcCCHHHHHHHHHH
Confidence 887775 8999999998655555544
No 189
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=97.16 E-value=0.0013 Score=58.42 Aligned_cols=77 Identities=16% Similarity=0.056 Sum_probs=50.3
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh---c-CCccccccCcchhhhhcCCCccEEE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH---F-ADVECVWGDNGLEQIIKEDSILGVA 78 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~ell~~~~~D~V~ 78 (355)
+||+|||+|.+|.. ....|...+- ..-+.++|+++++++..+...... . ..+... .+++ +.+++ .|+|+
T Consensus 2 ~kI~VIGaG~~G~~-la~~L~~~g~-~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~d~-~~~~~--aDvVi 74 (309)
T 1hyh_A 2 RKIGIIGLGNVGAA-VAHGLIAQGV-ADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIV--INDW-AALAD--ADVVI 74 (309)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHTC-CSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEE--ESCG-GGGTT--CSEEE
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCC-CCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEE--eCCH-HHhCC--CCEEE
Confidence 69999999999985 6777765541 122467899999988776432111 0 012211 1567 45554 89999
Q ss_pred EecCCccc
Q 018445 79 VVLAGQAQ 86 (355)
Q Consensus 79 I~tp~~~H 86 (355)
++++....
T Consensus 75 iav~~~~~ 82 (309)
T 1hyh_A 75 STLGNIKL 82 (309)
T ss_dssp ECCSCGGG
T ss_pred EecCCccc
Confidence 99998764
No 190
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=97.16 E-value=0.0013 Score=58.37 Aligned_cols=102 Identities=19% Similarity=0.136 Sum_probs=67.7
Q ss_pred ceEEEEecccccchhccchhhhc---CCeEEEEEEEeC-CHHHHHHHHHHHhhh--cCCcc-------------c-cccC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEI---SDLVSLKFIWSR-SEESAKSAAEVARKH--FADVE-------------C-VWGD 62 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~---~~~~~vvai~d~-~~~~~~~~~~~~~~~--~~~~~-------------~-~~~~ 62 (355)
+||||.|.|+||+. .++.+... ++ ++||+|-|. +++.+..+.+.=.-+ +++.. . .+..
T Consensus 2 ikVaInGfGrIGr~-v~r~l~~~~~~~~-~evvaInd~~~~~~~a~ll~ydS~hg~f~~~v~~~~~~l~v~g~~i~v~~~ 79 (335)
T 1obf_O 2 IRVAINGYGRIGRN-ILRAHYEGGKSHD-IEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDAN 79 (335)
T ss_dssp EEEEEECCSHHHHH-HHHHHHHTTSCSS-EEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECC
T ss_pred cEEEEECCCHHHHH-HHHHHHhcCCCCC-cEEEEEeCCCCHHHHHHHhccCCcCCCCCCCEEEeCCEEEECCEEEEEEEc
Confidence 79999999999986 88888766 44 999999996 444443332200001 11110 0 0000
Q ss_pred cchhhh-hcCCCccEEEEecCCcccHHHHHHHHHcC-CeEEEecCC
Q 018445 63 NGLEQI-IKEDSILGVAVVLAGQAQVDTSLKLLKAG-KHVIQEKPA 106 (355)
Q Consensus 63 ~~~~el-l~~~~~D~V~I~tp~~~H~~~~~~al~~G-khVl~EKP~ 106 (355)
.+.+++ ..+.++|+|+-||+...-.+.+...+++| |-|++-=|.
T Consensus 80 ~dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps 125 (335)
T 1obf_O 80 RNPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPG 125 (335)
T ss_dssp SCGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCC
T ss_pred CCcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEECCcc
Confidence 233444 23357999999999999999999999999 567776554
No 191
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=97.11 E-value=0.0014 Score=60.46 Aligned_cols=70 Identities=13% Similarity=0.007 Sum_probs=49.8
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcC---------------CccccccCcchhh
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFA---------------DVECVWGDNGLEQ 67 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~e 67 (355)
|||+|||+|.+|.. +...|.+ + .+|+ ++|+++++.+.+.+ ...+ .+ .. ++++++
T Consensus 1 MkI~VIG~G~vG~~-~A~~La~-G--~~V~-~~d~~~~~~~~l~~---~~~~i~e~~l~~~~~~~~~~l-~~--t~~~~~ 69 (402)
T 1dlj_A 1 MKIAVAGSGYVGLS-LGVLLSL-Q--NEVT-IVDILPSKVDKINN---GLSPIQDEYIEYYLKSKQLSI-KA--TLDSKA 69 (402)
T ss_dssp CEEEEECCSHHHHH-HHHHHTT-T--SEEE-EECSCHHHHHHHHT---TCCSSCCHHHHHHHHHSCCCE-EE--ESCHHH
T ss_pred CEEEEECCCHHHHH-HHHHHhC-C--CEEE-EEECCHHHHHHHHc---CCCCcCCCCHHHHHHhccCcE-EE--eCCHHH
Confidence 58999999999985 6777776 4 5664 56999999888754 1110 01 11 256777
Q ss_pred hhcCCCccEEEEecCCcc
Q 018445 68 IIKEDSILGVAVVLAGQA 85 (355)
Q Consensus 68 ll~~~~~D~V~I~tp~~~ 85 (355)
.+++ .|+|+|++|+..
T Consensus 70 ~~~~--aDvviiavpt~~ 85 (402)
T 1dlj_A 70 AYKE--AELVIIATPTNY 85 (402)
T ss_dssp HHHH--CSEEEECCCCCE
T ss_pred HhcC--CCEEEEecCCCc
Confidence 7765 799999999985
No 192
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=97.07 E-value=0.0036 Score=55.31 Aligned_cols=102 Identities=21% Similarity=0.232 Sum_probs=70.5
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh------cCCccc--------------cc
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH------FADVEC--------------VW 60 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~------~~~~~~--------------~~ 60 (355)
|++||||=|.|+||+. .++++...++ ++||||-|... ++..+-.+ +| +++... .+
T Consensus 3 m~~kv~INGfGrIGr~-v~R~~~~~~~-~~ivaind~~d--~~~~a~l~-kyDS~hG~f~~~v~~~~~~l~inGk~I~v~ 77 (338)
T 3lvf_P 3 MAVKVAINGFGRIGRL-AFRRIQEVEG-LEVVAVNDLTD--DDMLAHLL-KYDTMQGRFTGEVEVVDGGFRVNGKEVKSF 77 (338)
T ss_dssp CCEEEEEECCSHHHHH-HHHHHHTSTT-EEEEEEECSSC--HHHHHHHH-HCCTTTCCCSSCEEEETTEEEETTEEEEEE
T ss_pred ccEEEEEECCCcHHHH-HHHHHHHCCC-ceEEEEecCCC--HHHHHHHh-ccCCCCCCcCCeEEEcCCEEEECCEEEEEE
Confidence 8899999999999985 7777776655 99999999632 22222222 12 121100 00
Q ss_pred cCcchhhh-hcCCCccEEEEecCCcccHHHHHHHHHcC-CeEEEecCCC
Q 018445 61 GDNGLEQI-IKEDSILGVAVVLAGQAQVDTSLKLLKAG-KHVIQEKPAA 107 (355)
Q Consensus 61 ~~~~~~el-l~~~~~D~V~I~tp~~~H~~~~~~al~~G-khVl~EKP~a 107 (355)
...+++++ ..+.++|.|+=||....-.+.+...+++| |-|++--|..
T Consensus 78 ~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~ 126 (338)
T 3lvf_P 78 SEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPAT 126 (338)
T ss_dssp CCSCGGGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCB
T ss_pred EecccccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCCC
Confidence 01334444 23457999999999999999999999999 7899987753
No 193
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=97.07 E-value=0.00069 Score=63.51 Aligned_cols=108 Identities=14% Similarity=0.072 Sum_probs=75.8
Q ss_pred CceEEEEecc----cccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEE
Q 018445 2 APRIAILGAG----IFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGV 77 (355)
Q Consensus 2 ~~rigiiG~G----~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V 77 (355)
+-+|+|||++ .+|.. ++..+.+.+ ...|..| .+ .. + ...+.++ | .|++|+.+ .+|++
T Consensus 8 p~siAVvGas~~~~~~g~~-v~~~l~~~g-~~~v~pV-nP--~~-~--------~i~G~~~-y--~sl~~lp~--~~Dla 68 (457)
T 2csu_A 8 PKGIAVIGASNDPKKLGYE-VFKNLKEYK-KGKVYPV-NI--KE-E--------EVQGVKA-Y--KSVKDIPD--EIDLA 68 (457)
T ss_dssp CSEEEEETCCSCTTSHHHH-HHHHHTTCC-SSEEEEE-CS--SC-S--------EETTEEC-B--SSTTSCSS--CCSEE
T ss_pred CCeEEEECcCCCCCchHHH-HHHHHHHcC-CCEEEEE-CC--CC-C--------eECCEec-c--CCHHHcCC--CCCEE
Confidence 3479999998 45764 788887765 3455444 33 31 1 1115543 3 88998876 49999
Q ss_pred EEecCCcccHHHHHHHHHcCCeEEEecCCCC--CHH----HHHHHHHHhhccCCCCCCCCeEE
Q 018445 78 AVVLAGQAQVDTSLKLLKAGKHVIQEKPAAA--NIS----EIENALSRYNSICPDPPGQPIWA 134 (355)
Q Consensus 78 ~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~--~~~----e~~~l~~~a~~~~~~~~~~~~~~ 134 (355)
+|++|+..+.+++.+|+++|.+.++-.+-.. .-+ ..+++.+.++++ |+.+.
T Consensus 69 vi~vp~~~~~~~v~e~~~~Gi~~vv~~s~G~~e~g~~g~~~~~~l~~~a~~~------g~~vi 125 (457)
T 2csu_A 69 IIVVPKRFVKDTLIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIAHKY------GMRII 125 (457)
T ss_dssp EECSCHHHHHHHHHHHHHHTCCEEEECCCSSTTSCHHHHHHHHHHHHHHHHH------TCEEE
T ss_pred EEecCHHHHHHHHHHHHHcCCCEEEEecCCCCccccccHHHHHHHHHHHHHc------CCEEE
Confidence 9999999999999999999987666665332 222 267889999985 66554
No 194
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=97.06 E-value=0.00086 Score=59.31 Aligned_cols=73 Identities=7% Similarity=0.142 Sum_probs=49.8
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhh-------hc----------------CCccccc
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARK-------HF----------------ADVECVW 60 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~-------~~----------------~~~~~~~ 60 (355)
||+|||+|.||.. ....+.+.+ .+| .++|+++++++.+.+...+ .. ..+..
T Consensus 17 ~I~VIG~G~mG~~-iA~~la~~G--~~V-~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~-- 90 (302)
T 1f0y_A 17 HVTVIGGGLMGAG-IAQVAAATG--HTV-VLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT-- 90 (302)
T ss_dssp EEEEECCSHHHHH-HHHHHHHTT--CEE-EEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE--
T ss_pred EEEEECCCHHHHH-HHHHHHhCC--CeE-EEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEE--
Confidence 7999999999975 666666654 566 4789999988765332110 00 01111
Q ss_pred cCcchhhhhcCCCccEEEEecCCcc
Q 018445 61 GDNGLEQIIKEDSILGVAVVLAGQA 85 (355)
Q Consensus 61 ~~~~~~ell~~~~~D~V~I~tp~~~ 85 (355)
++|+++.+++ .|+|++++|...
T Consensus 91 -~~~~~~~~~~--aD~Vi~avp~~~ 112 (302)
T 1f0y_A 91 -STDAASVVHS--TDLVVEAIVENL 112 (302)
T ss_dssp -ESCHHHHTTS--CSEEEECCCSCH
T ss_pred -ecCHHHhhcC--CCEEEEcCcCcH
Confidence 2678877765 899999999875
No 195
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.06 E-value=0.0023 Score=53.62 Aligned_cols=102 Identities=14% Similarity=0.104 Sum_probs=64.7
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccC-cchhhhhc--CCCccEEEE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGD-NGLEQIIK--EDSILGVAV 79 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ell~--~~~~D~V~I 79 (355)
|||.|+|+|.+|.. ....|.+.+ .+++ ++|+++++.+.+.+. . +....++. ++.+.+-+ -.+.|+|++
T Consensus 1 M~iiIiG~G~~G~~-la~~L~~~g--~~v~-vid~~~~~~~~l~~~---~--~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 71 (218)
T 3l4b_C 1 MKVIIIGGETTAYY-LARSMLSRK--YGVV-IINKDRELCEEFAKK---L--KATIIHGDGSHKEILRDAEVSKNDVVVI 71 (218)
T ss_dssp CCEEEECCHHHHHH-HHHHHHHTT--CCEE-EEESCHHHHHHHHHH---S--SSEEEESCTTSHHHHHHHTCCTTCEEEE
T ss_pred CEEEEECCCHHHHH-HHHHHHhCC--CeEE-EEECCHHHHHHHHHH---c--CCeEEEcCCCCHHHHHhcCcccCCEEEE
Confidence 58999999999985 777887654 4664 559999999887652 2 22222221 23333322 246899999
Q ss_pred ecCCcccHHHHHHHHHc--C-CeEEEecCCCCCHHHHHHH
Q 018445 80 VLAGQAQVDTSLKLLKA--G-KHVIQEKPAAANISEIENA 116 (355)
Q Consensus 80 ~tp~~~H~~~~~~al~~--G-khVl~EKP~a~~~~e~~~l 116 (355)
+|+++.--..+...++. | ++|++. +.+....+.+
T Consensus 72 ~~~~d~~n~~~~~~a~~~~~~~~iia~---~~~~~~~~~l 108 (218)
T 3l4b_C 72 LTPRDEVNLFIAQLVMKDFGVKRVVSL---VNDPGNMEIF 108 (218)
T ss_dssp CCSCHHHHHHHHHHHHHTSCCCEEEEC---CCSGGGHHHH
T ss_pred ecCCcHHHHHHHHHHHHHcCCCeEEEE---EeCcchHHHH
Confidence 99998655555554443 4 566663 5555555544
No 196
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.04 E-value=0.0012 Score=58.18 Aligned_cols=82 Identities=13% Similarity=0.151 Sum_probs=54.9
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.+|.. ....+...+ .+| -++|+++++.+.+.+ . +... +.+.+++++++. .|+|++++|
T Consensus 156 ~~v~IiG~G~iG~~-~a~~l~~~G--~~V-~~~dr~~~~~~~~~~----~--g~~~-~~~~~l~~~l~~--aDvVi~~~p 222 (293)
T 3d4o_A 156 ANVAVLGLGRVGMS-VARKFAALG--AKV-KVGARESDLLARIAE----M--GMEP-FHISKAAQELRD--VDVCINTIP 222 (293)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CEE-EEEESSHHHHHHHHH----T--TSEE-EEGGGHHHHTTT--CSEEEECCS
T ss_pred CEEEEEeeCHHHHH-HHHHHHhCC--CEE-EEEECCHHHHHHHHH----C--CCee-cChhhHHHHhcC--CCEEEECCC
Confidence 48999999999985 677777665 565 577999887665432 2 3221 112578888875 899999999
Q ss_pred CcccHHHHHHHHHcC
Q 018445 83 GQAQVDTSLKLLKAG 97 (355)
Q Consensus 83 ~~~H~~~~~~al~~G 97 (355)
...--+-..+.++.|
T Consensus 223 ~~~i~~~~l~~mk~~ 237 (293)
T 3d4o_A 223 ALVVTANVLAEMPSH 237 (293)
T ss_dssp SCCBCHHHHHHSCTT
T ss_pred hHHhCHHHHHhcCCC
Confidence 754333334445444
No 197
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=97.02 E-value=0.0004 Score=63.16 Aligned_cols=96 Identities=15% Similarity=0.113 Sum_probs=61.3
Q ss_pred CceEEEEe-cccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcC--Ccc---ccccCcchhh--hhcCCC
Q 018445 2 APRIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFA--DVE---CVWGDNGLEQ--IIKEDS 73 (355)
Q Consensus 2 ~~rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~e--ll~~~~ 73 (355)
++|||||| +|..|.. .++.|.++|. ++|+.++.......+.+.+.. .+.. .++ ......+.++ .++ +
T Consensus 19 ~~kVaIvGAtG~vG~e-ll~lL~~hp~-~el~~l~aS~~saGk~~~~~~-~~~~~~~~p~~~~~~~v~~~~~~~~~~--~ 93 (381)
T 3hsk_A 19 VKKAGVLGATGSVGQR-FILLLSKHPE-FEIHALGASSRSAGKKYKDAA-SWKQTETLPETEQDIVVQECKPEGNFL--E 93 (381)
T ss_dssp CEEEEEETTTSHHHHH-HHHHHTTCSS-EEEEEEEECTTTTTSBHHHHC-CCCCSSCCCHHHHTCBCEESSSCTTGG--G
T ss_pred ccEEEEECCCChHHHH-HHHHHHcCCC-ceEEEeeccccccCCCHHHhc-ccccccccccccccceEEeCchhhhcc--c
Confidence 46999999 6878886 8888888887 899988743333333333210 0000 000 0000122221 233 4
Q ss_pred ccEEEEecCCcccHHHHHHHHHcCCeEEE
Q 018445 74 ILGVAVVLAGQAQVDTSLKLLKAGKHVIQ 102 (355)
Q Consensus 74 ~D~V~I~tp~~~H~~~~~~al~~GkhVl~ 102 (355)
+|+|+.|+|+....+++.+++++|..|+-
T Consensus 94 ~Dvvf~alp~~~s~~~~~~~~~~G~~VID 122 (381)
T 3hsk_A 94 CDVVFSGLDADVAGDIEKSFVEAGLAVVS 122 (381)
T ss_dssp CSEEEECCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEECCChhHHHHHHHHHHhCCCEEEE
Confidence 99999999999999999999999977654
No 198
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.01 E-value=0.00088 Score=59.23 Aligned_cols=70 Identities=17% Similarity=0.176 Sum_probs=50.3
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.+|.. .+..+...+ .+| -++|+++++.+.+.+ . +.... .+.+++++++. .|+|++++|
T Consensus 158 ~~v~IiG~G~iG~~-~a~~l~~~G--~~V-~~~d~~~~~~~~~~~----~--g~~~~-~~~~l~~~l~~--aDvVi~~~p 224 (300)
T 2rir_A 158 SQVAVLGLGRTGMT-IARTFAALG--ANV-KVGARSSAHLARITE----M--GLVPF-HTDELKEHVKD--IDICINTIP 224 (300)
T ss_dssp SEEEEECCSHHHHH-HHHHHHHTT--CEE-EEEESSHHHHHHHHH----T--TCEEE-EGGGHHHHSTT--CSEEEECCS
T ss_pred CEEEEEcccHHHHH-HHHHHHHCC--CEE-EEEECCHHHHHHHHH----C--CCeEE-chhhHHHHhhC--CCEEEECCC
Confidence 48999999999985 777777665 565 567999987765543 2 32211 12678888875 899999999
Q ss_pred Ccc
Q 018445 83 GQA 85 (355)
Q Consensus 83 ~~~ 85 (355)
...
T Consensus 225 ~~~ 227 (300)
T 2rir_A 225 SMI 227 (300)
T ss_dssp SCC
T ss_pred hhh
Confidence 843
No 199
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=97.00 E-value=0.0016 Score=57.82 Aligned_cols=77 Identities=21% Similarity=0.110 Sum_probs=48.2
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh----cCCccccccCcchhhhhcCCCccE
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH----FADVECVWGDNGLEQIIKEDSILG 76 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ell~~~~~D~ 76 (355)
|.+||+|||+|.+|.. ....+...+. ++ +.++|+++++++..+....+. ....... .++++ +.+++ .|+
T Consensus 1 M~~kI~VIGaG~vG~~-~a~~la~~g~-~~-v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~-~t~d~-~a~~~--aD~ 73 (309)
T 1ur5_A 1 MRKKISIIGAGFVGST-TAHWLAAKEL-GD-IVLLDIVEGVPQGKALDLYEASPIEGFDVRVT-GTNNY-ADTAN--SDV 73 (309)
T ss_dssp -CCEEEEECCSHHHHH-HHHHHHHTTC-SE-EEEECSSSSHHHHHHHHHHTTHHHHTCCCCEE-EESCG-GGGTT--CSE
T ss_pred CCCEEEEECCCHHHHH-HHHHHHHCCC-Ce-EEEEeCCccHHHHHHHhHHHhHhhcCCCeEEE-ECCCH-HHHCC--CCE
Confidence 7789999999999985 5555655443 47 788999998887544322211 1111111 12677 44555 899
Q ss_pred EEEecCCc
Q 018445 77 VAVVLAGQ 84 (355)
Q Consensus 77 V~I~tp~~ 84 (355)
|+++.+..
T Consensus 74 Vi~a~g~p 81 (309)
T 1ur5_A 74 IVVTSGAP 81 (309)
T ss_dssp EEECCCC-
T ss_pred EEEcCCCC
Confidence 99997543
No 200
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=96.99 E-value=0.0008 Score=59.69 Aligned_cols=85 Identities=14% Similarity=0.052 Sum_probs=51.2
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh-cCCccccccCcchhhhhcCCCccEEEE
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH-FADVECVWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ell~~~~~D~V~I 79 (355)
|+|||+|||+|.||.. +...|. .+ .+| .++++++++.+.+.+..-.. .++.......+.-++.. ...|+|++
T Consensus 1 M~mkI~IiGaGa~G~~-~a~~L~-~g--~~V-~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~--~~~D~vil 73 (307)
T 3ego_A 1 MSLKIGIIGGGSVGLL-CAYYLS-LY--HDV-TVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSIN--SDFDLLVV 73 (307)
T ss_dssp -CCEEEEECCSHHHHH-HHHHHH-TT--SEE-EEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCC--SCCSEEEE
T ss_pred CCCEEEEECCCHHHHH-HHHHHh-cC--Cce-EEEECCHHHHHHHHhCCceEecCCCeeccccccccccc--CCCCEEEE
Confidence 8999999999999974 777777 43 465 46689988888776521000 00100000001112222 45899999
Q ss_pred ecCCcccHHHHHH
Q 018445 80 VLAGQAQVDTSLK 92 (355)
Q Consensus 80 ~tp~~~H~~~~~~ 92 (355)
++++..-.+++..
T Consensus 74 avK~~~~~~~l~~ 86 (307)
T 3ego_A 74 TVKQHQLQSVFSS 86 (307)
T ss_dssp CCCGGGHHHHHHH
T ss_pred EeCHHHHHHHHHH
Confidence 9999876666544
No 201
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=96.98 E-value=0.00041 Score=64.39 Aligned_cols=82 Identities=15% Similarity=0.084 Sum_probs=54.4
Q ss_pred ceEEEEecccccchhccchhhhc----CCeEEEEEEEeCCHHHHHHHHHHHhhhcCCcccc-ccCcchhhhhcCCCccEE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEI----SDLVSLKFIWSRSEESAKSAAEVARKHFADVECV-WGDNGLEQIIKEDSILGV 77 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~----~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ell~~~~~D~V 77 (355)
.||||||+|.||.. +..+|.+. .-+++|+...++++...+.+.+ . ++... ....+.+|++++ .|+|
T Consensus 55 KkIgIIGlGsMG~A-mA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e----~--G~~v~d~ta~s~aEAa~~--ADVV 125 (525)
T 3fr7_A 55 KQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARA----A--GFTEESGTLGDIWETVSG--SDLV 125 (525)
T ss_dssp SEEEEECCTTHHHH-HHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHH----T--TCCTTTTCEEEHHHHHHH--CSEE
T ss_pred CEEEEEeEhHHHHH-HHHHHHhcccccCCCCEEEEEeCCchhhHHHHHH----C--CCEEecCCCCCHHHHHhc--CCEE
Confidence 48999999999985 88888875 1025665444544444443332 2 33210 001578999887 7999
Q ss_pred EEecCCcccHHHHHHH
Q 018445 78 AVVLAGQAQVDTSLKL 93 (355)
Q Consensus 78 ~I~tp~~~H~~~~~~a 93 (355)
++++|+..+.++....
T Consensus 126 ILaVP~~~~~eVl~eI 141 (525)
T 3fr7_A 126 LLLISDAAQADNYEKI 141 (525)
T ss_dssp EECSCHHHHHHHHHHH
T ss_pred EECCChHHHHHHHHHH
Confidence 9999999887776543
No 202
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=96.98 E-value=0.00076 Score=60.80 Aligned_cols=67 Identities=18% Similarity=0.265 Sum_probs=49.6
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||.. ....+...+ .+| .++|+++...+.+.+ . ++... ++++++++. .|+|++++|
T Consensus 165 ktvGIIG~G~IG~~-vA~~l~~~G--~~V-~~~dr~~~~~~~~~~----~--g~~~~---~~l~ell~~--aDvV~l~~P 229 (351)
T 3jtm_A 165 KTIGTVGAGRIGKL-LLQRLKPFG--CNL-LYHDRLQMAPELEKE----T--GAKFV---EDLNEMLPK--CDVIVINMP 229 (351)
T ss_dssp CEEEEECCSHHHHH-HHHHHGGGC--CEE-EEECSSCCCHHHHHH----H--CCEEC---SCHHHHGGG--CSEEEECSC
T ss_pred CEEeEEEeCHHHHH-HHHHHHHCC--CEE-EEeCCCccCHHHHHh----C--CCeEc---CCHHHHHhc--CCEEEECCC
Confidence 48999999999986 778787765 675 467888655554433 2 33221 689999997 899999999
Q ss_pred Cc
Q 018445 83 GQ 84 (355)
Q Consensus 83 ~~ 84 (355)
..
T Consensus 230 lt 231 (351)
T 3jtm_A 230 LT 231 (351)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 203
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=96.98 E-value=0.0045 Score=54.97 Aligned_cols=103 Identities=14% Similarity=0.081 Sum_probs=69.4
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeC--CHHHHHHHHHHHh--hhcCCccc--------------cccCc
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSR--SEESAKSAAEVAR--KHFADVEC--------------VWGDN 63 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~--~~~~~~~~~~~~~--~~~~~~~~--------------~~~~~ 63 (355)
++||||.|.|+||+. .++.+...+ ++|++|.|+ +.+.+..+-+.=. ..+++... .+...
T Consensus 7 ~~kvgInGFGRIGrl-v~R~~~~~~--veivainDp~~d~~~~a~l~~yDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~ 83 (346)
T 3h9e_O 7 ELTVGINGFGRIGRL-VLRACMEKG--VKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVEFRNGQLVVDNHEISVYQCK 83 (346)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHTT--CEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCS
T ss_pred eeEEEEECCChHHHH-HHHHHHhCC--CEEEEEeCCCCChhHhcccccccCCCCCCCCcEEEcCCEEEECCEEEEEEecC
Confidence 579999999999985 677666553 899999996 5555544432100 00121100 00012
Q ss_pred chhhhh-cCCCccEEEEecCCcccHHHHHHHHHcC-CeEEEecCCC
Q 018445 64 GLEQII-KEDSILGVAVVLAGQAQVDTSLKLLKAG-KHVIQEKPAA 107 (355)
Q Consensus 64 ~~~ell-~~~~~D~V~I~tp~~~H~~~~~~al~~G-khVl~EKP~a 107 (355)
+.+++- .+.++|.|+-||......+.+..++++| |-|++.-|-+
T Consensus 84 dp~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps~ 129 (346)
T 3h9e_O 84 EPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSP 129 (346)
T ss_dssp SGGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCS
T ss_pred ChhhCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCC
Confidence 344432 2237999999999999999999999999 7899988853
No 204
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=96.97 E-value=0.0038 Score=57.80 Aligned_cols=71 Identities=8% Similarity=0.013 Sum_probs=45.3
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh----cCCcc----------ccccCcchhhhh
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH----FADVE----------CVWGDNGLEQII 69 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~----~~~~~----------~~~~~~~~~ell 69 (355)
+|+|||+|.+|.. ..-.+.+.+ .+|+++ |.|+++.+.+.+ .. -|++. ....++|+++.+
T Consensus 23 ~IaViGlGYVGLp-~A~~~A~~G--~~V~g~-Did~~kV~~ln~---G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai 95 (444)
T 3vtf_A 23 SLSVLGLGYVGVV-HAVGFALLG--HRVVGY-DVNPSIVERLRA---GRPHIYEPGLEEALGRALSSGRLSFAESAEEAV 95 (444)
T ss_dssp EEEEECCSHHHHH-HHHHHHHHT--CEEEEE-CSCHHHHHHHHT---TCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHH
T ss_pred EEEEEccCHHHHH-HHHHHHhCC--CcEEEE-ECCHHHHHHHHC---CCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHH
Confidence 8999999999975 555566554 588765 999999887753 11 01100 000126778877
Q ss_pred cCCCccEEEEecCC
Q 018445 70 KEDSILGVAVVLAG 83 (355)
Q Consensus 70 ~~~~~D~V~I~tp~ 83 (355)
++ .|+++||.|+
T Consensus 96 ~~--ad~~~I~VpT 107 (444)
T 3vtf_A 96 AA--TDATFIAVGT 107 (444)
T ss_dssp HT--SSEEEECCCC
T ss_pred hc--CCceEEEecC
Confidence 76 5666666544
No 205
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=96.97 E-value=0.00092 Score=59.41 Aligned_cols=81 Identities=11% Similarity=0.037 Sum_probs=52.0
Q ss_pred CCceEEEEecccccchhccchhhhc-----CCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccc--c---------Ccc
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEI-----SDLVSLKFIWSRSEESAKSAAEVARKHFADVECVW--G---------DNG 64 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~-----~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~--~---------~~~ 64 (355)
|+|||+|||+|.||.. +...|.+. +. .+|+ ++++ +++.+.+.++ . ++.... + +++
T Consensus 7 ~~m~I~iiG~G~mG~~-~a~~L~~~~~~~~g~-~~V~-~~~r-~~~~~~l~~~---~--g~~~~~~~~~~~~~~~~~~~~ 77 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGGY-YGAMLALRAAATDGL-LEVS-WIAR-GAHLEAIRAA---G--GLRVVTPSRDFLARPTCVTDN 77 (317)
T ss_dssp CCEEEEEECCSHHHHH-HHHHHHHHHHHTTSS-EEEE-EECC-HHHHHHHHHH---T--SEEEECSSCEEEECCSEEESC
T ss_pred CCCEEEEECcCHHHHH-HHHHHHhCccccCCC-CCEE-EEEc-HHHHHHHHhc---C--CeEEEeCCCCeEEecceEecC
Confidence 4579999999999974 77777765 31 3554 5677 7777776541 1 221110 0 023
Q ss_pred hhhhhcCCCccEEEEecCCcccHHHHHHH
Q 018445 65 LEQIIKEDSILGVAVVLAGQAQVDTSLKL 93 (355)
Q Consensus 65 ~~ell~~~~~D~V~I~tp~~~H~~~~~~a 93 (355)
. +.++ +.|+|++++|+....+++...
T Consensus 78 ~-~~~~--~~D~vil~vk~~~~~~v~~~i 103 (317)
T 2qyt_A 78 P-AEVG--TVDYILFCTKDYDMERGVAEI 103 (317)
T ss_dssp H-HHHC--CEEEEEECCSSSCHHHHHHHH
T ss_pred c-cccC--CCCEEEEecCcccHHHHHHHH
Confidence 3 3343 489999999999877766554
No 206
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=96.96 E-value=0.0022 Score=59.43 Aligned_cols=103 Identities=10% Similarity=0.156 Sum_probs=64.1
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhc-------------
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIK------------- 70 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~------------- 70 (355)
|+-|||+|.+|.. ....|.+.+ .+|+ ++|+++++.+.+.+ ... + .| ...++|+++
T Consensus 13 ~~~ViGlGyvGlp-~A~~La~~G--~~V~-~~D~~~~kv~~L~~---g~~---p-i~-epgl~~ll~~~~~~g~l~~ttd 80 (431)
T 3ojo_A 13 KLTVVGLGYIGLP-TSIMFAKHG--VDVL-GVDINQQTIDKLQN---GQI---S-IE-EPGLQEVYEEVLSSGKLKVSTT 80 (431)
T ss_dssp EEEEECCSTTHHH-HHHHHHHTT--CEEE-EECSCHHHHHHHHT---TCC---S-SC-CTTHHHHHHHHHHTTCEEEESS
T ss_pred ccEEEeeCHHHHH-HHHHHHHCC--CEEE-EEECCHHHHHHHHC---CCC---C-cC-CCCHHHHHHhhcccCceEEeCc
Confidence 7889999999986 677777664 5775 56999999998865 111 1 11 123343321
Q ss_pred CCCccEEEEecCCcccH--------HHHHH---H----HHcCCeEEEecCCCCCHHHHHHHHHHh
Q 018445 71 EDSILGVAVVLAGQAQV--------DTSLK---L----LKAGKHVIQEKPAAANISEIENALSRY 120 (355)
Q Consensus 71 ~~~~D~V~I~tp~~~H~--------~~~~~---a----l~~GkhVl~EKP~a~~~~e~~~l~~~a 120 (355)
-.+.|+|+||+|+..+. ..+.. . ++.|. +++.|- +..+..++++.+..
T Consensus 81 ~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~-iVV~~S-TV~pgtt~~v~~~i 143 (431)
T 3ojo_A 81 PEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGN-TIIVES-TIAPKTMDDFVKPV 143 (431)
T ss_dssp CCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTE-EEEECS-CCCTTHHHHTHHHH
T ss_pred hhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCC-EEEEec-CCChhHHHHHHHHH
Confidence 12589999999988742 12222 2 22344 555553 77777788876643
No 207
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.95 E-value=0.00039 Score=60.46 Aligned_cols=112 Identities=11% Similarity=0.044 Sum_probs=72.5
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecCC
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLAG 83 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp~ 83 (355)
++.|||+|.+++. .+..|...+ +.-+.|++|++++++.+++. + +. .+ ..+++ ..+.|+|+.+||.
T Consensus 121 ~vlvlGaGgaara-v~~~L~~~G--~~~i~v~nRt~~ka~~la~~---~--~~--~~-~~~~~----~~~~DivInaTp~ 185 (271)
T 1npy_A 121 KVIVHGSGGMAKA-VVAAFKNSG--FEKLKIYARNVKTGQYLAAL---Y--GY--AY-INSLE----NQQADILVNVTSI 185 (271)
T ss_dssp CEEEECSSTTHHH-HHHHHHHTT--CCCEEEECSCHHHHHHHHHH---H--TC--EE-ESCCT----TCCCSEEEECSST
T ss_pred EEEEECCcHHHHH-HHHHHHHCC--CCEEEEEeCCHHHHHHHHHH---c--CC--cc-chhhh----cccCCEEEECCCC
Confidence 7999999999975 777787764 44447889999999998873 2 21 11 01222 2458999999998
Q ss_pred cccHH-------HHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEeccc
Q 018445 84 QAQVD-------TSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYR 140 (355)
Q Consensus 84 ~~H~~-------~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r 140 (355)
..+.. +....+..++.| ++= ..++.+. .+++.|++ .|..+.-|..+-
T Consensus 186 gm~~~~~~~~~~~~~~~l~~~~~v-~Dl--vY~P~~T-~ll~~A~~------~G~~~i~Gl~ML 239 (271)
T 1npy_A 186 GMKGGKEEMDLAFPKAFIDNASVA-FDV--VAMPVET-PFIRYAQA------RGKQTISGAAVI 239 (271)
T ss_dssp TCTTSTTTTSCSSCHHHHHHCSEE-EEC--CCSSSSC-HHHHHHHH------TTCEEECHHHHH
T ss_pred CccCccccCCCCCCHHHcCCCCEE-EEe--ecCCCCC-HHHHHHHH------CCCEEECCHHHH
Confidence 87532 234566666543 331 2233333 67778888 487776666553
No 208
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=96.94 E-value=0.0016 Score=60.14 Aligned_cols=89 Identities=22% Similarity=0.169 Sum_probs=60.1
Q ss_pred ceEEEEecccccchhccchhhhcCCeE-EEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLV-SLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~-~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
-+|+|||+|.+|.. .+..+...+ + +| .++++++++++.+++. . +... ..++++++++.. .|+|+.+|
T Consensus 168 ~~VlIiGaG~iG~~-~a~~l~~~G--~~~V-~v~~r~~~ra~~la~~---~--g~~~-~~~~~l~~~l~~--aDvVi~at 235 (404)
T 1gpj_A 168 KTVLVVGAGEMGKT-VAKSLVDRG--VRAV-LVANRTYERAVELARD---L--GGEA-VRFDELVDHLAR--SDVVVSAT 235 (404)
T ss_dssp CEEEEESCCHHHHH-HHHHHHHHC--CSEE-EEECSSHHHHHHHHHH---H--TCEE-CCGGGHHHHHHT--CSEEEECC
T ss_pred CEEEEEChHHHHHH-HHHHHHHCC--CCEE-EEEeCCHHHHHHHHHH---c--CCce-ecHHhHHHHhcC--CCEEEEcc
Confidence 37999999999985 777777664 4 44 5779999998776652 3 2221 112677888864 89999999
Q ss_pred CCcccH---HHHHH-HHHc---CCeEEEe
Q 018445 82 AGQAQV---DTSLK-LLKA---GKHVIQE 103 (355)
Q Consensus 82 p~~~H~---~~~~~-al~~---GkhVl~E 103 (355)
|...+. +.+.. +++. |.-+++.
T Consensus 236 ~~~~~~~~~~~l~~~~lk~r~~~~~v~vd 264 (404)
T 1gpj_A 236 AAPHPVIHVDDVREALRKRDRRSPILIID 264 (404)
T ss_dssp SSSSCCBCHHHHHHHHHHCSSCCCEEEEE
T ss_pred CCCCceecHHHHHHHHHhccCCCCEEEEE
Confidence 987664 44444 4542 4455554
No 209
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=96.93 E-value=0.0037 Score=55.29 Aligned_cols=102 Identities=23% Similarity=0.210 Sum_probs=69.6
Q ss_pred CCceEEEEecccccchhccchhhhcC-CeEEEEEEEeCCHHHHHHHHHHHhhh------cCCccc--------------c
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEIS-DLVSLKFIWSRSEESAKSAAEVARKH------FADVEC--------------V 59 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~-~~~~vvai~d~~~~~~~~~~~~~~~~------~~~~~~--------------~ 59 (355)
|++||||=|.|+||+. .++++...+ ++++||||-|+. .++..+-.+ +| +++... .
T Consensus 1 m~~kv~INGfGrIGr~-v~Ra~~~~~~~~~~ivaiNd~~--d~~~~a~l~-kyDS~hG~f~~~v~~~~~~l~i~Gk~I~v 76 (335)
T 3doc_A 1 MAVRVAINGFGRIGRN-ILRAIVESGRTDIQVVAINDLG--PVETNAHLL-RYDSVHGRFPKEVEVAGDTIDVGYGPIKV 76 (335)
T ss_dssp CCEEEEEECCSHHHHH-HHHHHHHTTCCSEEEEEEECSS--CHHHHHHHH-HEETTTEECSSCCEECSSEEESSSSEEEE
T ss_pred CCEEEEEECCCcHHHH-HHHHHHhccCCCeEEEEEeCCC--CHHHHHHHh-cccCCCCCCCCeEEEecCEEEECCEEEEE
Confidence 8999999999999985 777766542 349999999983 233333222 12 222100 0
Q ss_pred ccCcchhhh-hcCCCccEEEEecCCcccHHHHHHHHHcC-CeEEEecCC
Q 018445 60 WGDNGLEQI-IKEDSILGVAVVLAGQAQVDTSLKLLKAG-KHVIQEKPA 106 (355)
Q Consensus 60 ~~~~~~~el-l~~~~~D~V~I~tp~~~H~~~~~~al~~G-khVl~EKP~ 106 (355)
+...+++++ ..+.++|.|+=||....-.+.+...+++| |-|++--|.
T Consensus 77 ~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps 125 (335)
T 3doc_A 77 HAVRNPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPA 125 (335)
T ss_dssp ECCSSTTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred EeecccccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCC
Confidence 001233333 23457999999999999999999999999 789998774
No 210
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.91 E-value=0.0014 Score=56.30 Aligned_cols=95 Identities=11% Similarity=0.076 Sum_probs=64.4
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCH-------------------HHHHHHHHHHhhhcCCccccccC-
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSE-------------------ESAKSAAEVARKHFADVECVWGD- 62 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~- 62 (355)
-||.|||+|..|.. .+..|.+.+ +.-+.++|.+. .+++.++++..+..|++......
T Consensus 29 ~~VlvvG~GglG~~-va~~La~~G--vg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~ 105 (251)
T 1zud_1 29 SQVLIIGLGGLGTP-AALYLAGAG--VGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQ 105 (251)
T ss_dssp CEEEEECCSTTHHH-HHHHHHHTT--CSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred CcEEEEccCHHHHH-HHHHHHHcC--CCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEec
Confidence 48999999999985 788888765 44456777654 67777777766666665432111
Q ss_pred ----cchhhhhcCCCccEEEEecCCc-ccHHHHHHHHHcCCeEEE
Q 018445 63 ----NGLEQIIKEDSILGVAVVLAGQ-AQVDTSLKLLKAGKHVIQ 102 (355)
Q Consensus 63 ----~~~~ell~~~~~D~V~I~tp~~-~H~~~~~~al~~GkhVl~ 102 (355)
+++++++++ .|+|+.+|.+. .+..+...|.+.|++++.
T Consensus 106 ~~~~~~~~~~~~~--~DvVi~~~d~~~~r~~l~~~~~~~~~p~i~ 148 (251)
T 1zud_1 106 RLTGEALKDAVAR--ADVVLDCTDNMATRQEINAACVALNTPLIT 148 (251)
T ss_dssp CCCHHHHHHHHHH--CSEEEECCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCHHHHHHHHhc--CCEEEECCCCHHHHHHHHHHHHHhCCCEEE
Confidence 245566664 89999998764 345555667777777655
No 211
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=96.91 E-value=0.00099 Score=60.28 Aligned_cols=87 Identities=13% Similarity=0.081 Sum_probs=54.7
Q ss_pred ceEEEEecccccchhccchhhhcCC-----eEEEEEEEeCCHH-----HHHHHHHHHh--hhcCCc--c-ccccCcchhh
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISD-----LVSLKFIWSRSEE-----SAKSAAEVAR--KHFADV--E-CVWGDNGLEQ 67 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~-----~~~vvai~d~~~~-----~~~~~~~~~~--~~~~~~--~-~~~~~~~~~e 67 (355)
+||+|||+|.||.. +...|.+.+. ..+| .++|++++ ..+.+.+... .+.++. . ....++|+++
T Consensus 9 mkI~iIG~G~mG~~-~a~~l~~~g~~~~~~~~~V-~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (354)
T 1x0v_A 9 KKVCIVGSGNWGSA-IAKIVGGNAAQLAQFDPRV-TMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQ 86 (354)
T ss_dssp EEEEEECCSHHHHH-HHHHHHHHHHHCTTEEEEE-EEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHH
T ss_pred CeEEEECCCHHHHH-HHHHHHhcCCcccCCCCeE-EEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHH
Confidence 69999999999985 7777765430 0344 67799888 7776654210 111121 0 0011267888
Q ss_pred hhcCCCccEEEEecCCcccHHHHHHH
Q 018445 68 IIKEDSILGVAVVLAGQAQVDTSLKL 93 (355)
Q Consensus 68 ll~~~~~D~V~I~tp~~~H~~~~~~a 93 (355)
.+++ .|+|++++|+....+++...
T Consensus 87 ~~~~--aD~Vilav~~~~~~~v~~~i 110 (354)
T 1x0v_A 87 AAED--ADILIFVVPHQFIGKICDQL 110 (354)
T ss_dssp HHTT--CSEEEECCCGGGHHHHHHHH
T ss_pred HHcC--CCEEEEeCCHHHHHHHHHHH
Confidence 7775 89999999987656555543
No 212
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=96.91 E-value=0.00028 Score=62.27 Aligned_cols=118 Identities=15% Similarity=0.044 Sum_probs=70.8
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+++|||+|.+|+. .+..|.+.+ +.-+.|++|++++++.+++...... + .....+++.+.+.+ .|+|+.+||
T Consensus 142 ~~vlVlGaGg~g~a-ia~~L~~~G--~~~V~v~nR~~~ka~~la~~~~~~~-~--~~~~~~~~~~~~~~--aDivIn~t~ 213 (297)
T 2egg_A 142 KRILVIGAGGGARG-IYFSLLSTA--AERIDMANRTVEKAERLVREGDERR-S--AYFSLAEAETRLAE--YDIIINTTS 213 (297)
T ss_dssp CEEEEECCSHHHHH-HHHHHHTTT--CSEEEEECSSHHHHHHHHHHSCSSS-C--CEECHHHHHHTGGG--CSEEEECSC
T ss_pred CEEEEECcHHHHHH-HHHHHHHCC--CCEEEEEeCCHHHHHHHHHHhhhcc-C--ceeeHHHHHhhhcc--CCEEEECCC
Confidence 47999999999975 777777654 4234688999999998887321100 0 11101345555554 899999999
Q ss_pred CcccHH-----HHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEec
Q 018445 83 GQAQVD-----TSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAEN 138 (355)
Q Consensus 83 ~~~H~~-----~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~ 138 (355)
...+.. +....++.|.. +++= ..++.+. ++++.+++ .|....-|..
T Consensus 214 ~~~~~~~~~~~i~~~~l~~~~~-v~D~--~y~P~~T-~ll~~A~~------~G~~~v~Gl~ 264 (297)
T 2egg_A 214 VGMHPRVEVQPLSLERLRPGVI-VSDI--IYNPLET-KWLKEAKA------RGARVQNGVG 264 (297)
T ss_dssp TTCSSCCSCCSSCCTTCCTTCE-EEEC--CCSSSSC-HHHHHHHH------TTCEEECSHH
T ss_pred CCCCCCCCCCCCCHHHcCCCCE-EEEc--CCCCCCC-HHHHHHHH------CcCEEECCHH
Confidence 887632 12233444543 3331 2222233 36777777 3777666643
No 213
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=96.91 E-value=0.00051 Score=63.79 Aligned_cols=94 Identities=17% Similarity=0.151 Sum_probs=61.7
Q ss_pred CceEEEEecccccchhccchhhhcCCeE---EEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcch----hhhhcCCCc
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLV---SLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGL----EQIIKEDSI 74 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~---~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ell~~~~~ 74 (355)
+.||.|||+|.+|+. .++.+.++++ + +|+ +.|++...++. .+.....+...... .+++ +++|.+ -
T Consensus 13 ~~rVlIIGaGgVG~~-va~lla~~~d-v~~~~I~-vaD~~~~~~~~-~~~~g~~~~~~~Vd--adnv~~~l~aLl~~--~ 84 (480)
T 2ph5_A 13 KNRFVILGFGCVGQA-LMPLIFEKFD-IKPSQVT-IIAAEGTKVDV-AQQYGVSFKLQQIT--PQNYLEVIGSTLEE--N 84 (480)
T ss_dssp CSCEEEECCSHHHHH-HHHHHHHHBC-CCGGGEE-EEESSCCSCCH-HHHHTCEEEECCCC--TTTHHHHTGGGCCT--T
T ss_pred CCCEEEECcCHHHHH-HHHHHHhCCC-CceeEEE-EeccchhhhhH-HhhcCCceeEEecc--chhHHHHHHHHhcC--C
Confidence 469999999999986 7888887765 4 343 44666554322 22111011111111 1333 456654 3
Q ss_pred cEEEEecCCcccHHHHHHHHHcCCeEEEe
Q 018445 75 LGVAVVLAGQAQVDTSLKLLKAGKHVIQE 103 (355)
Q Consensus 75 D~V~I~tp~~~H~~~~~~al~~GkhVl~E 103 (355)
|+|+.++++..-.+++.+|+++|.|++--
T Consensus 85 DvVIN~s~~~~~l~Im~acleaGv~YlDT 113 (480)
T 2ph5_A 85 DFLIDVSIGISSLALIILCNQKGALYINA 113 (480)
T ss_dssp CEEEECCSSSCHHHHHHHHHHHTCEEEES
T ss_pred CEEEECCccccCHHHHHHHHHcCCCEEEC
Confidence 99999999999999999999999997743
No 214
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.91 E-value=0.0016 Score=50.30 Aligned_cols=100 Identities=10% Similarity=0.033 Sum_probs=59.3
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccC-cchhhhhc--CCCccEEEEe
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGD-NGLEQIIK--EDSILGVAVV 80 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ell~--~~~~D~V~I~ 80 (355)
+|.|+|+|.+|.. ....|.+.+ .+|+ ++|+++++.+.+.+. +....++. ++.+.+-+ -.+.|+|+++
T Consensus 8 ~v~I~G~G~iG~~-la~~L~~~g--~~V~-~id~~~~~~~~~~~~------~~~~~~gd~~~~~~l~~~~~~~~d~vi~~ 77 (141)
T 3llv_A 8 EYIVIGSEAAGVG-LVRELTAAG--KKVL-AVDKSKEKIELLEDE------GFDAVIADPTDESFYRSLDLEGVSAVLIT 77 (141)
T ss_dssp SEEEECCSHHHHH-HHHHHHHTT--CCEE-EEESCHHHHHHHHHT------TCEEEECCTTCHHHHHHSCCTTCSEEEEC
T ss_pred EEEEECCCHHHHH-HHHHHHHCC--CeEE-EEECCHHHHHHHHHC------CCcEEECCCCCHHHHHhCCcccCCEEEEe
Confidence 7999999999985 777777654 4664 459999998877651 22222211 33333322 2468999999
Q ss_pred cCCcccHHHH-HHHHHcC-CeEEEecCCCCCHHHHHHH
Q 018445 81 LAGQAQVDTS-LKLLKAG-KHVIQEKPAAANISEIENA 116 (355)
Q Consensus 81 tp~~~H~~~~-~~al~~G-khVl~EKP~a~~~~e~~~l 116 (355)
+|+...-..+ ..+-+.| ..|++- +.+....+.|
T Consensus 78 ~~~~~~n~~~~~~a~~~~~~~iia~---~~~~~~~~~l 112 (141)
T 3llv_A 78 GSDDEFNLKILKALRSVSDVYAIVR---VSSPKKKEEF 112 (141)
T ss_dssp CSCHHHHHHHHHHHHHHCCCCEEEE---ESCGGGHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCceEEEE---EcChhHHHHH
Confidence 9965443333 3333334 445552 3444444444
No 215
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=96.90 E-value=0.00017 Score=65.31 Aligned_cols=89 Identities=18% Similarity=0.207 Sum_probs=58.8
Q ss_pred CCceEEEEe-cccccchhccchhhhc--CCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchh-hhhcCCCccE
Q 018445 1 MAPRIAILG-AGIFVKTQYIPRLAEI--SDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLE-QIIKEDSILG 76 (355)
Q Consensus 1 m~~rigiiG-~G~~~~~~~~~~l~~~--~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-ell~~~~~D~ 76 (355)
|++|||||| +|..|.. .++.|.++ |. ++++.+.+++..- +... +.+....+ .+.+ +.+ .++|+
T Consensus 1 m~~kVaIvGATG~vG~e-LlrlL~~~~~p~-~el~~~as~~saG-~~~~------~~~~~~~~--~~~~~~~~--~~~Dv 67 (366)
T 3pwk_A 1 MGYTVAVVGATGAVGAQ-MIKMLEESTLPI-DKIRYLASARSAG-KSLK------FKDQDITI--EETTETAF--EGVDI 67 (366)
T ss_dssp -CEEEEEETTTSHHHHH-HHHHHHTCCCCE-EEEEEEECTTTTT-CEEE------ETTEEEEE--EECCTTTT--TTCSE
T ss_pred CCcEEEEECCCChHHHH-HHHHHhcCCCCc-EEEEEEEccccCC-Ccce------ecCCCceE--eeCCHHHh--cCCCE
Confidence 899999999 7878886 78877775 54 8888887654321 1000 11111111 2221 223 35999
Q ss_pred EEEecCCcccHHHHHHHHHcCCeEEE
Q 018445 77 VAVVLAGQAQVDTSLKLLKAGKHVIQ 102 (355)
Q Consensus 77 V~I~tp~~~H~~~~~~al~~GkhVl~ 102 (355)
|+.|+|.....+++..++++|.-|+-
T Consensus 68 vf~a~~~~~s~~~a~~~~~~G~~vID 93 (366)
T 3pwk_A 68 ALFSAGSSTSAKYAPYAVKAGVVVVD 93 (366)
T ss_dssp EEECSCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEECCChHhHHHHHHHHHHCCCEEEE
Confidence 99999999999999999999986543
No 216
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=96.86 E-value=0.00092 Score=59.66 Aligned_cols=99 Identities=15% Similarity=0.111 Sum_probs=58.5
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHH---hh-hcCCccc--cccCcchhhhhcCCCc
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVA---RK-HFADVEC--VWGDNGLEQIIKEDSI 74 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~---~~-~~~~~~~--~~~~~~~~ell~~~~~ 74 (355)
|+|||+|||+|.+|.. +...|.+.+ .+|+ ++++++ . +.+.+.. .. +.++... .-.+++.+++.+ +.
T Consensus 1 M~mkI~IiGaGaiG~~-~a~~L~~~g--~~V~-~~~r~~-~-~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~--~~ 72 (320)
T 3i83_A 1 MSLNILVIGTGAIGSF-YGALLAKTG--HCVS-VVSRSD-Y-ETVKAKGIRIRSATLGDYTFRPAAVVRSAAELET--KP 72 (320)
T ss_dssp --CEEEEESCCHHHHH-HHHHHHHTT--CEEE-EECSTT-H-HHHHHHCEEEEETTTCCEEECCSCEESCGGGCSS--CC
T ss_pred CCCEEEEECcCHHHHH-HHHHHHhCC--CeEE-EEeCCh-H-HHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCC--CC
Confidence 8899999999999985 777777654 4654 557765 2 4444321 00 1111110 000256666653 48
Q ss_pred cEEEEecCCcccHHHHHHHHH---cCCe-EEEecCCC
Q 018445 75 LGVAVVLAGQAQVDTSLKLLK---AGKH-VIQEKPAA 107 (355)
Q Consensus 75 D~V~I~tp~~~H~~~~~~al~---~Gkh-Vl~EKP~a 107 (355)
|+|++++|+....+++..... .+.. |.+-|-+.
T Consensus 73 DlVilavK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 73 DCTLLCIKVVEGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp SEEEECCCCCTTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred CEEEEecCCCChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 999999999988777665432 2233 55677664
No 217
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=95.90 E-value=0.00017 Score=59.90 Aligned_cols=67 Identities=15% Similarity=0.127 Sum_probs=46.6
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEe
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
|.+||+|||+|.||.. +...|.+.+ .+| .+++++++ .+.+.+ . ++. . .+.+++++. .|+|+++
T Consensus 18 ~~~~I~iIG~G~mG~~-la~~L~~~G--~~V-~~~~r~~~-~~~~~~----~--g~~--~--~~~~~~~~~--aDvVila 80 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKS-LGLKMLQCG--YSV-VFGSRNPQ-VSSLLP----R--GAE--V--LCYSEAASR--SDVIVLA 80 (201)
Confidence 4679999999999985 777777654 465 45788876 333322 1 222 1 366777765 8999999
Q ss_pred cCCc
Q 018445 81 LAGQ 84 (355)
Q Consensus 81 tp~~ 84 (355)
+|+.
T Consensus 81 v~~~ 84 (201)
T 2yjz_A 81 VHRE 84 (201)
Confidence 9985
No 218
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.82 E-value=0.0055 Score=56.57 Aligned_cols=104 Identities=11% Similarity=0.118 Sum_probs=68.1
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcC---CCccEEE
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKE---DSILGVA 78 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~---~~~D~V~ 78 (355)
.++|.|||+|.+|.. ....|.+.+ .+++. .|.++++.+.+.+ . +....++..+=.++|.. .+.|+|+
T Consensus 4 ~~~viIiG~Gr~G~~-va~~L~~~g--~~vvv-Id~d~~~v~~~~~----~--g~~vi~GDat~~~~L~~agi~~A~~vi 73 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQI-TGRLLLSSG--VKMVV-LDHDPDHIETLRK----F--GMKVFYGDATRMDLLESAGAAKAEVLI 73 (413)
T ss_dssp CCSEEEECCSHHHHH-HHHHHHHTT--CCEEE-EECCHHHHHHHHH----T--TCCCEESCTTCHHHHHHTTTTTCSEEE
T ss_pred CCeEEEECCCHHHHH-HHHHHHHCC--CCEEE-EECCHHHHHHHHh----C--CCeEEEcCCCCHHHHHhcCCCccCEEE
Confidence 368999999999986 777887754 46654 4999999988764 2 44445543333344432 4589999
Q ss_pred EecCCcccHHHHHHHH-HcC--CeEEEecCCCCCHHHHHHHHH
Q 018445 79 VVLAGQAQVDTSLKLL-KAG--KHVIQEKPAAANISEIENALS 118 (355)
Q Consensus 79 I~tp~~~H~~~~~~al-~~G--khVl~EKP~a~~~~e~~~l~~ 118 (355)
+++++..--..+...+ +.+ .+|++- +.+..++..|.+
T Consensus 74 v~~~~~~~n~~i~~~ar~~~p~~~Iiar---a~~~~~~~~L~~ 113 (413)
T 3l9w_A 74 NAIDDPQTNLQLTEMVKEHFPHLQIIAR---ARDVDHYIRLRQ 113 (413)
T ss_dssp ECCSSHHHHHHHHHHHHHHCTTCEEEEE---ESSHHHHHHHHH
T ss_pred ECCCChHHHHHHHHHHHHhCCCCeEEEE---ECCHHHHHHHHH
Confidence 9999865444443333 334 367764 566777766644
No 219
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=96.81 E-value=0.0039 Score=55.17 Aligned_cols=105 Identities=17% Similarity=0.169 Sum_probs=70.4
Q ss_pred CC-ceEEEEecccccchhccchhhhcCCeEEEEEEEeC--CHHHHHHHHHHH--hhhcCC--cccc--------------
Q 018445 1 MA-PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSR--SEESAKSAAEVA--RKHFAD--VECV-------------- 59 (355)
Q Consensus 1 m~-~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~--~~~~~~~~~~~~--~~~~~~--~~~~-------------- 59 (355)
|+ +||||=|.|+||+. .++++...++ ++||||-|+ +.+.+..+-+.= ...+++ +...
T Consensus 1 m~~~kv~INGfGrIGr~-v~R~~~~~~~-~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~~v~~~~~~~l~i~Gk~I~v 78 (337)
T 3v1y_O 1 MGKIKIGINGFGRIGRL-VARVALQSED-VELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTV 78 (337)
T ss_dssp -CCEEEEEECCSHHHHH-HHHHHHTCSS-EEEEEEECTTSCHHHHHHHHHCCTTTCCCCSSCEEEEETTEEEETTEEEEE
T ss_pred CCceEEEEECCChHHHH-HHHHHHhCCC-cEEEEEeCCCCCHHHHHHHhhhccCCCcccCceEEEcCCcEEEECCEEEEE
Confidence 66 79999999999985 7777776655 999999997 666655543310 001233 1100
Q ss_pred ccCcchhhh-hcCCCccEEEEecCCcccHHHHHHHHHcC-CeEEEecCCC
Q 018445 60 WGDNGLEQI-IKEDSILGVAVVLAGQAQVDTSLKLLKAG-KHVIQEKPAA 107 (355)
Q Consensus 60 ~~~~~~~el-l~~~~~D~V~I~tp~~~H~~~~~~al~~G-khVl~EKP~a 107 (355)
+...+++++ ..+.++|.|+=||....-.+.+...+++| |-|++--|.+
T Consensus 79 ~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~ 128 (337)
T 3v1y_O 79 FGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSK 128 (337)
T ss_dssp ECCSSGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCS
T ss_pred EEecCcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCC
Confidence 000122222 11236999999999999999999999999 7899988853
No 220
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=96.73 E-value=0.0043 Score=55.30 Aligned_cols=105 Identities=11% Similarity=0.041 Sum_probs=69.0
Q ss_pred CCceEEEEecccccchhccch----hhhcCCeEEEEEEEeC--CHHHHHHHHHH--HhhhcCCcccc-------------
Q 018445 1 MAPRIAILGAGIFVKTQYIPR----LAEISDLVSLKFIWSR--SEESAKSAAEV--ARKHFADVECV------------- 59 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~----l~~~~~~~~vvai~d~--~~~~~~~~~~~--~~~~~~~~~~~------------- 59 (355)
|++||||=|.|+||+. .+++ +...++ ++||||-|+ +.+.+..+-+. ....+++....
T Consensus 1 m~~kv~INGFGrIGr~-v~Ra~~~~~~~~~~-~~vvaINd~~~d~~~~a~llkyDS~hG~f~~~v~~~~~~~~~~~~~~l 78 (359)
T 3ids_C 1 MPIKVGINGFGRIGRM-VFQALCEDGLLGTE-IDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDDTL 78 (359)
T ss_dssp CCEEEEEECTTHHHHH-HHHHHHHTTCBTTT-EEEEEEECSSCCHHHHHHHHHEETTTEECSSCEEEECSCTTSSSCCEE
T ss_pred CceEEEEECCChHHHH-HHHHhHHHHhcCCC-cEEEEEecCCCCHHHHHHHhcccCCCCCEeeEEEecccccccCCCCEE
Confidence 8999999999999985 7777 444444 999999995 55554443320 00002221110
Q ss_pred --------cc--Ccchhhhh-cCCCccEEEEecCCcccHHHHHHHHHcC-CeEEEecCCC
Q 018445 60 --------WG--DNGLEQII-KEDSILGVAVVLAGQAQVDTSLKLLKAG-KHVIQEKPAA 107 (355)
Q Consensus 60 --------~~--~~~~~ell-~~~~~D~V~I~tp~~~H~~~~~~al~~G-khVl~EKP~a 107 (355)
.. ..+++++- .+.++|.|+=||.-..-.+.+...+++| |-|++--|..
T Consensus 79 ~inGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps~ 138 (359)
T 3ids_C 79 VVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPAS 138 (359)
T ss_dssp EETTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCCB
T ss_pred EECCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCC
Confidence 00 01222221 1236999999999999999999999999 7799877753
No 221
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=96.71 E-value=0.011 Score=49.12 Aligned_cols=109 Identities=14% Similarity=-0.013 Sum_probs=74.6
Q ss_pred ceEEEEec-ccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 3 PRIAILGA-GIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 3 ~rigiiG~-G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
||.+|+|+ |+||+. ... +...++ .+|++..|+... +++ + ++|+|+-.|
T Consensus 13 ~~~~v~Ga~GrMG~~-i~~-~~~~~~-~elv~~id~~~~----------------------~~l----~--~~DVvIDFT 61 (228)
T 1vm6_A 13 MKYGIVGYSGRMGQE-IQK-VFSEKG-HELVLKVDVNGV----------------------EEL----D--SPDVVIDFS 61 (228)
T ss_dssp CEEEEETTTSHHHHH-HHH-HHHHTT-CEEEEEEETTEE----------------------EEC----S--CCSEEEECS
T ss_pred ceeEEEEecCHHHHH-HHH-HHhCCC-CEEEEEEcCCCc----------------------ccc----c--CCCEEEECC
Confidence 78999998 889985 444 445555 899999986421 122 2 479888899
Q ss_pred CCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHH
Q 018445 82 AGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIA 153 (355)
Q Consensus 82 p~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~ 153 (355)
.|..=.+.+..|+++|+++.+=-. ..+.++..++.+++ + .+.+..+.| |+-.+..+.++++
T Consensus 62 ~P~a~~~~~~~~~~~g~~~ViGTT-G~~~~~~~~l~~~a-~-------~~~vv~apN--fSlGvnll~~l~~ 122 (228)
T 1vm6_A 62 SPEALPKTVDLCKKYRAGLVLGTT-ALKEEHLQMLRELS-K-------EVPVVQAYN--FSIGINVLKRFLS 122 (228)
T ss_dssp CGGGHHHHHHHHHHHTCEEEECCC-SCCHHHHHHHHHHT-T-------TSEEEECSC--CCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHH-h-------hCCEEEecc--ccHHHHHHHHHHH
Confidence 999999999999999999887533 35556665666654 3 344555544 4555555555544
No 222
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=96.69 E-value=0.00048 Score=59.20 Aligned_cols=70 Identities=17% Similarity=0.207 Sum_probs=51.2
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecCC
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLAG 83 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp~ 83 (355)
|++|||+|.+|+. .+..|.+.+ ++-+.|++|++++++.+++ ++ +. .. ++++++.+++ .|+|+.+||.
T Consensus 110 ~vliiGaGg~a~a-i~~~L~~~G--~~~I~v~nR~~~ka~~la~---~~--~~-~~--~~~~~~~~~~--aDiVInatp~ 176 (253)
T 3u62_A 110 PVVVVGAGGAARA-VIYALLQMG--VKDIWVVNRTIERAKALDF---PV--KI-FS--LDQLDEVVKK--AKSLFNTTSV 176 (253)
T ss_dssp SEEEECCSHHHHH-HHHHHHHTT--CCCEEEEESCHHHHHTCCS---SC--EE-EE--GGGHHHHHHT--CSEEEECSST
T ss_pred eEEEECcHHHHHH-HHHHHHHcC--CCEEEEEeCCHHHHHHHHH---Hc--cc-CC--HHHHHhhhcC--CCEEEECCCC
Confidence 7999999999975 777787754 4334788999999887765 22 11 12 2667777776 8999999997
Q ss_pred ccc
Q 018445 84 QAQ 86 (355)
Q Consensus 84 ~~H 86 (355)
..+
T Consensus 177 gm~ 179 (253)
T 3u62_A 177 GMK 179 (253)
T ss_dssp TTT
T ss_pred CCC
Confidence 654
No 223
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.67 E-value=0.0034 Score=55.92 Aligned_cols=95 Identities=20% Similarity=0.153 Sum_probs=65.3
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCH-------------------HHHHHHHHHHhhhcCCccccccC-
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSE-------------------ESAKSAAEVARKHFADVECVWGD- 62 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~- 62 (355)
-||.|||+|..|.. .+..|...+ +.=+.++|.+. .+++.+++..++.+|.+......
T Consensus 35 ~~VlIvGaGGlGs~-va~~La~aG--Vg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~~ 111 (340)
T 3rui_A 35 TKVLLLGAGTLGCY-VSRALIAWG--VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKL 111 (340)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECC
T ss_pred CEEEEECCCHHHHH-HHHHHHHcC--CCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEec
Confidence 48999999999985 788887765 44446777754 56777777777777776432211
Q ss_pred -------------------cchhhhhcCCCccEEEEecCCc-ccHHHHHHHHHcCCeEEE
Q 018445 63 -------------------NGLEQIIKEDSILGVAVVLAGQ-AQVDTSLKLLKAGKHVIQ 102 (355)
Q Consensus 63 -------------------~~~~ell~~~~~D~V~I~tp~~-~H~~~~~~al~~GkhVl~ 102 (355)
++++++++. .|+|+.+|-+. .++.+...|.+.||+++.
T Consensus 112 ~i~~~g~~~~~~~~~~~~~~~l~~~l~~--~DlVvd~tDn~~tR~lin~~c~~~~~plI~ 169 (340)
T 3rui_A 112 SIPMIGHKLVNEEAQHKDFDRLRALIKE--HDIIFLLVDSRESRWLPSLLSNIENKTVIN 169 (340)
T ss_dssp CCCCTTSCCSCHHHHHHHHHHHHHHHHH--CSEEEECCSSTGGGHHHHHHHHHTTCEEEE
T ss_pred cccccCcccchhhhhcCCHHHHHhhhcc--CCEEEecCCCHHHHHHHHHHHHHcCCcEEE
Confidence 123556665 88999888774 566666777777877553
No 224
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=96.67 E-value=0.0054 Score=54.82 Aligned_cols=75 Identities=17% Similarity=0.237 Sum_probs=47.5
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh---c-CCccccccCcchhhhhcCCCccE
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH---F-ADVECVWGDNGLEQIIKEDSILG 76 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~ell~~~~~D~ 76 (355)
|++||+|||+|.+|.. ....+...+- ++ +.++|+++++++..+...... . .... ...++|+ +.+++ .|+
T Consensus 13 ~~~kI~ViGaG~vG~~-iA~~la~~g~-~~-V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~-i~~t~d~-~al~~--aD~ 85 (328)
T 2hjr_A 13 MRKKISIIGAGQIGST-IALLLGQKDL-GD-VYMFDIIEGVPQGKALDLNHCMALIGSPAK-IFGENNY-EYLQN--SDV 85 (328)
T ss_dssp CCCEEEEECCSHHHHH-HHHHHHHTTC-CE-EEEECSSTTHHHHHHHHHHHHHHHHTCCCC-EEEESCG-GGGTT--CSE
T ss_pred CCCEEEEECCCHHHHH-HHHHHHhCCC-Ce-EEEEECCHHHHHHHHHHHHhHhhccCCCCE-EEECCCH-HHHCC--CCE
Confidence 5679999999999985 5555555442 37 788999998887643221111 1 1111 1112677 55555 899
Q ss_pred EEEecC
Q 018445 77 VAVVLA 82 (355)
Q Consensus 77 V~I~tp 82 (355)
|+++.+
T Consensus 86 VI~avg 91 (328)
T 2hjr_A 86 VIITAG 91 (328)
T ss_dssp EEECCS
T ss_pred EEEcCC
Confidence 999973
No 225
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=96.64 E-value=0.002 Score=56.41 Aligned_cols=96 Identities=13% Similarity=0.137 Sum_probs=62.6
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCH------------------HHHHHHHHHHhhhcCCccccccC--
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSE------------------ESAKSAAEVARKHFADVECVWGD-- 62 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~------------------~~~~~~~~~~~~~~~~~~~~~~~-- 62 (355)
-||.|||+|..|.. .+..|.+.+ +.=+.++|.|. .|++.++++..+..|.+......
T Consensus 37 ~~VlVvGaGGlGs~-va~~La~aG--VG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~ 113 (292)
T 3h8v_A 37 FAVAIVGVGGVGSV-TAEMLTRCG--IGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYN 113 (292)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHT--CSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCC
T ss_pred CeEEEECcCHHHHH-HHHHHHHcC--CCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEeccc
Confidence 48999999999985 778887765 33346668766 67777777766666766433211
Q ss_pred ----cchhhhhc---------CCCccEEEEecCCc-ccHHHHHHHHHcCCeEE
Q 018445 63 ----NGLEQIIK---------EDSILGVAVVLAGQ-AQVDTSLKLLKAGKHVI 101 (355)
Q Consensus 63 ----~~~~ell~---------~~~~D~V~I~tp~~-~H~~~~~~al~~GkhVl 101 (355)
++++++++ ..++|+|+.||.+. .++.+-..|.+.|++.+
T Consensus 114 l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~~Pli 166 (292)
T 3h8v_A 114 ITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWM 166 (292)
T ss_dssp TTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHTCCEE
T ss_pred CCcHHHHHHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhCCCEE
Confidence 12344442 13588888888774 45566667777776653
No 226
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=96.62 E-value=0.0026 Score=56.97 Aligned_cols=65 Identities=23% Similarity=0.412 Sum_probs=47.9
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||.. ....+...+ .+| .++|++++. +...+ . ++. + .++++++++ .|+|++++|
T Consensus 147 ~~vgIIG~G~iG~~-vA~~l~~~G--~~V-~~~d~~~~~-~~~~~----~--g~~--~--~~l~e~l~~--aDiVil~vp 209 (333)
T 2d0i_A 147 KKVGILGMGAIGKA-IARRLIPFG--VKL-YYWSRHRKV-NVEKE----L--KAR--Y--MDIDELLEK--SDIVILALP 209 (333)
T ss_dssp CEEEEECCSHHHHH-HHHHHGGGT--CEE-EEECSSCCH-HHHHH----H--TEE--E--CCHHHHHHH--CSEEEECCC
T ss_pred CEEEEEccCHHHHH-HHHHHHHCC--CEE-EEECCCcch-hhhhh----c--Cce--e--cCHHHHHhh--CCEEEEcCC
Confidence 48999999999986 777777664 576 567988876 32222 2 332 2 578999886 899999999
Q ss_pred Cc
Q 018445 83 GQ 84 (355)
Q Consensus 83 ~~ 84 (355)
..
T Consensus 210 ~~ 211 (333)
T 2d0i_A 210 LT 211 (333)
T ss_dssp CC
T ss_pred CC
Confidence 87
No 227
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=96.60 E-value=0.0029 Score=56.40 Aligned_cols=98 Identities=11% Similarity=0.087 Sum_probs=57.8
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh-cCCcccc---ccCcchhhhhcCCCccEE
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH-FADVECV---WGDNGLEQIIKEDSILGV 77 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~ell~~~~~D~V 77 (355)
.+||+|||+|.||.. +...|.+.+ .+|+.+ +++++.+.+.+..... .++.... ..+++.+++ .+.|+|
T Consensus 19 ~~kI~IiGaGa~G~~-~a~~L~~~G--~~V~l~--~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~D~v 90 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCY-YGGMLARAG--HEVILI--ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSAV---QGADLV 90 (318)
T ss_dssp -CEEEEESCSHHHHH-HHHHHHHTT--CEEEEE--CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGGG---TTCSEE
T ss_pred CCcEEEECcCHHHHH-HHHHHHHCC--CeEEEE--EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHHc---CCCCEE
Confidence 579999999999985 777777654 466544 7888888876531000 1111000 001456553 358999
Q ss_pred EEecCCcccHHHHHHHHH---cCCe-EEEecCCC
Q 018445 78 AVVLAGQAQVDTSLKLLK---AGKH-VIQEKPAA 107 (355)
Q Consensus 78 ~I~tp~~~H~~~~~~al~---~Gkh-Vl~EKP~a 107 (355)
++++|+....+++..... .+.. |.+-|.+.
T Consensus 91 ilavk~~~~~~~l~~l~~~l~~~~~iv~~~nGi~ 124 (318)
T 3hwr_A 91 LFCVKSTDTQSAALAMKPALAKSALVLSLQNGVE 124 (318)
T ss_dssp EECCCGGGHHHHHHHHTTTSCTTCEEEEECSSSS
T ss_pred EEEcccccHHHHHHHHHHhcCCCCEEEEeCCCCC
Confidence 999999865555544322 2222 34566553
No 228
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=96.60 E-value=0.0057 Score=52.83 Aligned_cols=112 Identities=14% Similarity=0.053 Sum_probs=72.6
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecCC
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLAG 83 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp~ 83 (355)
|+.|||+|.+|+. .+..|.+.+ .+| .|++|++++++.++ .. ++.. .+++++- +.|+|+.+||.
T Consensus 120 ~vlvlGaGGaara-ia~~L~~~G--~~v-~V~nRt~~ka~~la-~~-----~~~~----~~~~~l~---~~DiVInaTp~ 182 (269)
T 3phh_A 120 NALILGAGGSAKA-LACELKKQG--LQV-SVLNRSSRGLDFFQ-RL-----GCDC----FMEPPKS---AFDLIINATSA 182 (269)
T ss_dssp EEEEECCSHHHHH-HHHHHHHTT--CEE-EEECSSCTTHHHHH-HH-----TCEE----ESSCCSS---CCSEEEECCTT
T ss_pred EEEEECCCHHHHH-HHHHHHHCC--CEE-EEEeCCHHHHHHHH-HC-----CCeE----ecHHHhc---cCCEEEEcccC
Confidence 7999999999975 777887765 355 67899999999887 32 2221 2344442 68999999998
Q ss_pred cccH------HHHHHHHHcCCeEEEe---cCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHH
Q 018445 84 QAQV------DTSLKLLKAGKHVIQE---KPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFV 146 (355)
Q Consensus 84 ~~H~------~~~~~al~~GkhVl~E---KP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~ 146 (355)
..+. +.+...++.+. ++++ +| .|. +++.|++ .|....-|..+-...+..
T Consensus 183 Gm~~~~~l~~~~l~~~l~~~~-~v~D~vY~P--~T~-----ll~~A~~------~G~~~~~Gl~MLv~Qa~~ 240 (269)
T 3phh_A 183 SLHNELPLNKEVLKGYFKEGK-LAYDLAYGF--LTP-----FLSLAKE------LKTPFQDGKDMLIYQAAL 240 (269)
T ss_dssp CCCCSCSSCHHHHHHHHHHCS-EEEESCCSS--CCH-----HHHHHHH------TTCCEECSHHHHHHHHHH
T ss_pred CCCCCCCCChHHHHhhCCCCC-EEEEeCCCC--chH-----HHHHHHH------CcCEEECCHHHHHHHHHH
Confidence 7652 22222455543 4455 45 332 6777777 477777666655444433
No 229
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=96.60 E-value=0.0015 Score=58.90 Aligned_cols=67 Identities=9% Similarity=0.081 Sum_probs=47.6
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||+. ....+...+ .+|+ ++|+++++... . .. ++.. + .+++|+++. .|+|++++|
T Consensus 169 ~tvGIIG~G~IG~~-vA~~l~~~G--~~V~-~~d~~~~~~~~--~---~~--g~~~-~--~~l~ell~~--aDvV~l~~P 232 (347)
T 1mx3_A 169 ETLGIIGLGRVGQA-VALRAKAFG--FNVL-FYDPYLSDGVE--R---AL--GLQR-V--STLQDLLFH--SDCVTLHCG 232 (347)
T ss_dssp CEEEEECCSHHHHH-HHHHHHTTT--CEEE-EECTTSCTTHH--H---HH--TCEE-C--SSHHHHHHH--CSEEEECCC
T ss_pred CEEEEEeECHHHHH-HHHHHHHCC--CEEE-EECCCcchhhH--h---hc--CCee-c--CCHHHHHhc--CCEEEEcCC
Confidence 48999999999986 777777664 6765 57887654221 1 12 3321 1 589999986 899999999
Q ss_pred Ccc
Q 018445 83 GQA 85 (355)
Q Consensus 83 ~~~ 85 (355)
...
T Consensus 233 ~t~ 235 (347)
T 1mx3_A 233 LNE 235 (347)
T ss_dssp CCT
T ss_pred CCH
Confidence 753
No 230
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.60 E-value=0.0017 Score=51.19 Aligned_cols=85 Identities=12% Similarity=-0.005 Sum_probs=53.6
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCcccccc-Ccchhhhhc--CCCccEEEE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWG-DNGLEQIIK--EDSILGVAV 79 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ell~--~~~~D~V~I 79 (355)
.+|.|+|+|.+|.. .+..|.+.+ .+|+ ++|+++++++.+.+ .. +.....+ .++.+.+.+ -.+.|+|++
T Consensus 20 ~~v~IiG~G~iG~~-la~~L~~~g--~~V~-vid~~~~~~~~~~~---~~--g~~~~~~d~~~~~~l~~~~~~~ad~Vi~ 90 (155)
T 2g1u_A 20 KYIVIFGCGRLGSL-IANLASSSG--HSVV-VVDKNEYAFHRLNS---EF--SGFTVVGDAAEFETLKECGMEKADMVFA 90 (155)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CEEE-EEESCGGGGGGSCT---TC--CSEEEESCTTSHHHHHTTTGGGCSEEEE
T ss_pred CcEEEECCCHHHHH-HHHHHHhCC--CeEE-EEECCHHHHHHHHh---cC--CCcEEEecCCCHHHHHHcCcccCCEEEE
Confidence 58999999999985 777777654 5664 56999888765431 11 2222111 123333322 135899999
Q ss_pred ecCCcccHHHHHHHHHc
Q 018445 80 VLAGQAQVDTSLKLLKA 96 (355)
Q Consensus 80 ~tp~~~H~~~~~~al~~ 96 (355)
++++..-...+..+++.
T Consensus 91 ~~~~~~~~~~~~~~~~~ 107 (155)
T 2g1u_A 91 FTNDDSTNFFISMNARY 107 (155)
T ss_dssp CSSCHHHHHHHHHHHHH
T ss_pred EeCCcHHHHHHHHHHHH
Confidence 99997666666555553
No 231
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=96.59 E-value=0.0015 Score=58.77 Aligned_cols=65 Identities=14% Similarity=0.281 Sum_probs=47.5
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||+. ....+...+ .+|++ +|+++...+.. . +.. + .++++++++. .|+|++++|
T Consensus 174 ktvGIIGlG~IG~~-vA~~l~~~G--~~V~~-~dr~~~~~~~~------~--g~~--~-~~~l~ell~~--sDvV~l~~P 236 (345)
T 4g2n_A 174 RRLGIFGMGRIGRA-IATRARGFG--LAIHY-HNRTRLSHALE------E--GAI--Y-HDTLDSLLGA--SDIFLIAAP 236 (345)
T ss_dssp CEEEEESCSHHHHH-HHHHHHTTT--CEEEE-ECSSCCCHHHH------T--TCE--E-CSSHHHHHHT--CSEEEECSC
T ss_pred CEEEEEEeChhHHH-HHHHHHHCC--CEEEE-ECCCCcchhhh------c--CCe--E-eCCHHHHHhh--CCEEEEecC
Confidence 48999999999986 777777664 67754 78876544321 1 222 1 1689999997 799999999
Q ss_pred Cc
Q 018445 83 GQ 84 (355)
Q Consensus 83 ~~ 84 (355)
..
T Consensus 237 lt 238 (345)
T 4g2n_A 237 GR 238 (345)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 232
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=96.59 E-value=0.0015 Score=58.89 Aligned_cols=67 Identities=12% Similarity=0.181 Sum_probs=47.4
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||+. ....+...+ .+|++ +|+++.. +...+ . ++.. .++++|+++. .|+|++++|
T Consensus 161 ~tvGIIGlG~IG~~-vA~~l~~~G--~~V~~-~d~~~~~-~~~~~----~--g~~~---~~~l~ell~~--aDiV~l~~P 224 (352)
T 3gg9_A 161 QTLGIFGYGKIGQL-VAGYGRAFG--MNVLV-WGRENSK-ERARA----D--GFAV---AESKDALFEQ--SDVLSVHLR 224 (352)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CEEEE-ECSHHHH-HHHHH----T--TCEE---CSSHHHHHHH--CSEEEECCC
T ss_pred CEEEEEeECHHHHH-HHHHHHhCC--CEEEE-ECCCCCH-HHHHh----c--CceE---eCCHHHHHhh--CCEEEEecc
Confidence 48999999999986 777777765 67754 5877533 22221 2 4321 1689999987 799999998
Q ss_pred Ccc
Q 018445 83 GQA 85 (355)
Q Consensus 83 ~~~ 85 (355)
...
T Consensus 225 lt~ 227 (352)
T 3gg9_A 225 LND 227 (352)
T ss_dssp CST
T ss_pred CcH
Confidence 653
No 233
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=96.58 E-value=0.0061 Score=54.27 Aligned_cols=77 Identities=13% Similarity=-0.023 Sum_probs=48.2
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhc---CCccccccCcchhhhhcCCCccEEEE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHF---ADVECVWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ell~~~~~D~V~I 79 (355)
|||+|||+|.+|.. .+..|...+. ..-+.++|+++++++.......... +...... +++++ ++ +.|+|++
T Consensus 1 mkI~VIGaG~~G~~-la~~l~~~g~-~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~--~d~~~-~~--~aDvVii 73 (319)
T 1a5z_A 1 MKIGIVGLGRVGSS-TAFALLMKGF-AREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA--GDYAD-LK--GSDVVIV 73 (319)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHTC-CSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE--CCGGG-GT--TCSEEEE
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCC-CCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe--CCHHH-hC--CCCEEEE
Confidence 58999999999985 6666665442 2224678999988877654221111 1111111 45543 44 4899999
Q ss_pred ecCCccc
Q 018445 80 VLAGQAQ 86 (355)
Q Consensus 80 ~tp~~~H 86 (355)
++|...+
T Consensus 74 av~~~~~ 80 (319)
T 1a5z_A 74 AAGVPQK 80 (319)
T ss_dssp CCCCCCC
T ss_pred ccCCCCC
Confidence 9998664
No 234
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.57 E-value=0.0029 Score=56.63 Aligned_cols=75 Identities=13% Similarity=0.049 Sum_probs=48.8
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhh---hcCCccccccCcchhhhhcCCCccEEE
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARK---HFADVECVWGDNGLEQIIKEDSILGVA 78 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ell~~~~~D~V~ 78 (355)
++||+|||+|.+|.. ....|...+. ++ +.++|+++++++........ +.+.......++|+++.+++ .|+|+
T Consensus 9 ~~kI~VIGaG~vG~~-lA~~la~~g~-~~-V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~--aDiVi 83 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGT-MGYLCALREL-AD-VVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTG--ADCVI 83 (331)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHHTC-CE-EEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTT--CSEEE
T ss_pred CCEEEEECCCHHHHH-HHHHHHhCCC-Ce-EEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCC--CCEEE
Confidence 479999999999985 5666665443 36 78899999888773322111 11111111113789877776 89999
Q ss_pred Eec
Q 018445 79 VVL 81 (355)
Q Consensus 79 I~t 81 (355)
++.
T Consensus 84 ~a~ 86 (331)
T 1pzg_A 84 VTA 86 (331)
T ss_dssp ECC
T ss_pred Ecc
Confidence 997
No 235
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=96.57 E-value=0.0028 Score=57.12 Aligned_cols=91 Identities=11% Similarity=0.111 Sum_probs=60.1
Q ss_pred CC-ceEEEEe-cccccchhccchhhhcC-----CeEEEEEEEeCCHHHHHHHHHHHhhhcCCcc----ccccCcchhhhh
Q 018445 1 MA-PRIAILG-AGIFVKTQYIPRLAEIS-----DLVSLKFIWSRSEESAKSAAEVARKHFADVE----CVWGDNGLEQII 69 (355)
Q Consensus 1 m~-~rigiiG-~G~~~~~~~~~~l~~~~-----~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ell 69 (355)
|+ +||+|+| +|.+|+. .++.|.+++ . ++++++.+++... +.+. ...|... ......+.++ +
T Consensus 7 M~m~kVaIvGATG~vG~~-llr~L~~~~~~~~~~-~ei~~l~s~~~ag-k~~~----~~~~~l~~~~~~~~~~~~~~~-~ 78 (352)
T 2nqt_A 7 ANATKVAVAGASGYAGGE-ILRLLLGHPAYADGR-LRIGALTAATSAG-STLG----EHHPHLTPLAHRVVEPTEAAV-L 78 (352)
T ss_dssp CSCEEEEEETTTSHHHHH-HHHHHHTCHHHHTTS-EEEEEEEESSCTT-SBGG----GTCTTCGGGTTCBCEECCHHH-H
T ss_pred ccCCEEEEECCCCHHHHH-HHHHHHcCCCCCCcc-EEEEEEECCCcCC-Cchh----hhcccccccceeeeccCCHHH-h
Confidence 54 5999999 9999986 788888776 5 8999998764321 1111 1111111 1110012233 3
Q ss_pred cCCCccEEEEecCCcccHHHHHHHHHcCCeEEE
Q 018445 70 KEDSILGVAVVLAGQAQVDTSLKLLKAGKHVIQ 102 (355)
Q Consensus 70 ~~~~~D~V~I~tp~~~H~~~~~~al~~GkhVl~ 102 (355)
. ++|+|+.|+|.....+++.++ ++|+-|+.
T Consensus 79 ~--~~DvVf~alg~~~s~~~~~~~-~~G~~vID 108 (352)
T 2nqt_A 79 G--GHDAVFLALPHGHSAVLAQQL-SPETLIID 108 (352)
T ss_dssp T--TCSEEEECCTTSCCHHHHHHS-CTTSEEEE
T ss_pred c--CCCEEEECCCCcchHHHHHHH-hCCCEEEE
Confidence 3 599999999999999999999 99976554
No 236
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=96.57 E-value=0.002 Score=57.24 Aligned_cols=66 Identities=15% Similarity=0.127 Sum_probs=48.3
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||.. ....+...+ .+|+ ++|+++++.. +. +. ++. + .+++++++. .|+|++++|
T Consensus 143 ~~vgIIG~G~IG~~-~A~~l~~~G--~~V~-~~d~~~~~~~-~~----~~--g~~--~--~~l~ell~~--aDvVvl~~P 205 (313)
T 2ekl_A 143 KTIGIVGFGRIGTK-VGIIANAMG--MKVL-AYDILDIREK-AE----KI--NAK--A--VSLEELLKN--SDVISLHVT 205 (313)
T ss_dssp CEEEEESCSHHHHH-HHHHHHHTT--CEEE-EECSSCCHHH-HH----HT--TCE--E--CCHHHHHHH--CSEEEECCC
T ss_pred CEEEEEeeCHHHHH-HHHHHHHCC--CEEE-EECCCcchhH-HH----hc--Cce--e--cCHHHHHhh--CCEEEEecc
Confidence 58999999999986 777777665 6764 6788877642 21 22 332 2 579999986 899999999
Q ss_pred Ccc
Q 018445 83 GQA 85 (355)
Q Consensus 83 ~~~ 85 (355)
...
T Consensus 206 ~~~ 208 (313)
T 2ekl_A 206 VSK 208 (313)
T ss_dssp CCT
T ss_pred CCh
Confidence 654
No 237
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=96.53 E-value=0.0027 Score=55.77 Aligned_cols=77 Identities=16% Similarity=0.022 Sum_probs=46.1
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhh---hcCCccccccCcchhhhhcCCCccEEEE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARK---HFADVECVWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ell~~~~~D~V~I 79 (355)
|||+|||+|.+|.. ....|...+. +.=+.++|+++++++..+-.... .++.-.....++| .+.+++ .|+|++
T Consensus 1 MkI~ViGaG~vG~~-la~~l~~~~~-~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~--aDiVVi 75 (294)
T 1oju_A 1 MKLGFVGAGRVGST-SAFTCLLNLD-VDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKG--SEIIVV 75 (294)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHSC-CSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTT--CSEEEE
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCC-CCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCC--CCEEEE
Confidence 69999999999975 5666665443 33347889999987632221111 1221111111256 555665 799999
Q ss_pred ecCCc
Q 018445 80 VLAGQ 84 (355)
Q Consensus 80 ~tp~~ 84 (355)
+.+..
T Consensus 76 aag~~ 80 (294)
T 1oju_A 76 TAGLA 80 (294)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 86543
No 238
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=96.52 E-value=0.0026 Score=58.14 Aligned_cols=67 Identities=16% Similarity=0.098 Sum_probs=48.3
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||.. ....+...+ .+|+ ++|+++...+...+ . ++.. + .+++++++. .|+|++++|
T Consensus 192 ktvGIIGlG~IG~~-vA~~l~a~G--~~V~-~~d~~~~~~~~~~~----~--G~~~-~--~~l~ell~~--aDvV~l~~P 256 (393)
T 2nac_A 192 MHVGTVAAGRIGLA-VLRRLAPFD--VHLH-YTDRHRLPESVEKE----L--NLTW-H--ATREDMYPV--CDVVTLNCP 256 (393)
T ss_dssp CEEEEECCSHHHHH-HHHHHGGGT--CEEE-EECSSCCCHHHHHH----H--TCEE-C--SSHHHHGGG--CSEEEECSC
T ss_pred CEEEEEeECHHHHH-HHHHHHhCC--CEEE-EEcCCccchhhHhh----c--Ccee-c--CCHHHHHhc--CCEEEEecC
Confidence 48999999999986 777777765 6764 66887655443322 2 3322 1 579999986 899999999
Q ss_pred Cc
Q 018445 83 GQ 84 (355)
Q Consensus 83 ~~ 84 (355)
..
T Consensus 257 lt 258 (393)
T 2nac_A 257 LH 258 (393)
T ss_dssp CC
T ss_pred Cc
Confidence 64
No 239
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=96.52 E-value=0.0022 Score=57.89 Aligned_cols=68 Identities=15% Similarity=0.191 Sum_probs=49.5
Q ss_pred ceEEEEecccccchhccchhh-hcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 3 PRIAILGAGIFVKTQYIPRLA-EISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~-~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
.+|||||+|.||.. ....+. ..+ .+|+ ++|+++++.+...+ . ++. + .+++++++++ .|+|++++
T Consensus 164 ~~vgIIG~G~IG~~-vA~~l~~~~G--~~V~-~~d~~~~~~~~~~~----~--g~~--~-~~~l~ell~~--aDvVil~v 228 (348)
T 2w2k_A 164 HVLGAVGLGAIQKE-IARKAVHGLG--MKLV-YYDVAPADAETEKA----L--GAE--R-VDSLEELARR--SDCVSVSV 228 (348)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTC--CEEE-EECSSCCCHHHHHH----H--TCE--E-CSSHHHHHHH--CSEEEECC
T ss_pred CEEEEEEECHHHHH-HHHHHHHhcC--CEEE-EECCCCcchhhHhh----c--CcE--E-eCCHHHHhcc--CCEEEEeC
Confidence 48999999999986 777776 654 5764 67998776654432 2 332 2 1589999986 89999999
Q ss_pred CCcc
Q 018445 82 AGQA 85 (355)
Q Consensus 82 p~~~ 85 (355)
|...
T Consensus 229 p~~~ 232 (348)
T 2w2k_A 229 PYMK 232 (348)
T ss_dssp CCSG
T ss_pred CCCh
Confidence 9863
No 240
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=96.51 E-value=0.0096 Score=53.01 Aligned_cols=104 Identities=16% Similarity=0.066 Sum_probs=68.1
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeC--CHHHHHHHHHHHh--hhcCCcccccc--------------Cc
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSR--SEESAKSAAEVAR--KHFADVECVWG--------------DN 63 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~--~~~~~~~~~~~~~--~~~~~~~~~~~--------------~~ 63 (355)
.+||||=|.|+||+. .++.+...++ ++||+|-|+ +++.+....+.=. ..+++....-. ..
T Consensus 11 ~~kv~INGfGrIGr~-v~ra~~~~~~-~evvaInd~~~~~~~~a~l~~yDS~hg~~~~~v~~~~~~l~v~Gk~i~v~~~~ 88 (345)
T 2b4r_O 11 ATKLGINGFGRIGRL-VFRAAFGRKD-IEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEK 88 (345)
T ss_dssp CEEEEEECCSHHHHH-HHHHHHTCSS-EEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCS
T ss_pred heEEEEeCCchHHHH-HHHHHhhCCC-cEEEEEcCCCCChHHHHHHhccCCCCCcCCCCEEEcCCEEEECCEEEEEEEcC
Confidence 479999999999986 8888877766 999999993 5555444332100 00111100000 01
Q ss_pred chhhh-hcCCCccEEEEecCCcccHHHHHHHHHcC-CeEEEecCCC
Q 018445 64 GLEQI-IKEDSILGVAVVLAGQAQVDTSLKLLKAG-KHVIQEKPAA 107 (355)
Q Consensus 64 ~~~el-l~~~~~D~V~I~tp~~~H~~~~~~al~~G-khVl~EKP~a 107 (355)
+.+++ ..+.++|+|+=||+...-.+.+...+++| |.|++--|-.
T Consensus 89 dp~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps~ 134 (345)
T 2b4r_O 89 DPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPK 134 (345)
T ss_dssp SGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCS
T ss_pred CcccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEECCCCC
Confidence 22222 11126999999999999999999999999 6688876643
No 241
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=96.51 E-value=0.0036 Score=56.07 Aligned_cols=111 Identities=18% Similarity=0.095 Sum_probs=69.6
Q ss_pred eEEEEecccccchhccc---hhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEe
Q 018445 4 RIAILGAGIFVKTQYIP---RLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~---~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
|+.|.|.|.++.. +.+ .|.+.....++|+++ ++ ...+.+.+.......+++.. .|++++++. .+|+++|+
T Consensus 24 ~~vi~~~g~~g~~-~aKta~gllr~~~~~~iVgvi-~~-~~Gkd~ge~~~g~~~gipv~---~d~~~al~~-~~d~lvig 96 (350)
T 2g0t_A 24 PAAIVAWGQLGTA-HAKTTYGLLRHSRLFKPVCVV-AE-HEGKMASDFVKPVRYDVPVV---SSVEKAKEM-GAEVLIIG 96 (350)
T ss_dssp EEEEECTTTTTSG-GGHHHHHHHHHCSSEEEEEEE-SS-CTTCBGGGTCC-CCSCCBEE---SSHHHHHHT-TCCEEEEC
T ss_pred CEEEEeCCCCChH-HHHHHHHHHhhCCCCeEEEEe-ec-CCCCcHHHhhCCCCCCceee---CCHHHHHhc-CCCEEEEE
Confidence 8999999999975 666 335553338999999 44 21222221100011244432 799999974 49999999
Q ss_pred cCCc------ccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhcc
Q 018445 81 LAGQ------AQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSI 123 (355)
Q Consensus 81 tp~~------~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~ 123 (355)
+.+. .-.+.+++|+++|++|.+==-. -+.+-.+|.++|++.
T Consensus 97 ~a~~gg~l~~~~~~~I~~Al~~G~nVvsglh~--~l~~~pel~~~A~~~ 143 (350)
T 2g0t_A 97 VSNPGGYLEEQIATLVKKALSLGMDVISGLHF--KISQQTEFLKIAHEN 143 (350)
T ss_dssp CCSCCHHHHHHHHHHHHHHHHTTCEEEECCCC----CCHHHHHHHHHHH
T ss_pred ecCCCCCCCHHHHHHHHHHHHcCCcEEeCChh--hhhCCHHHHHHHHHC
Confidence 7443 3357889999999999653221 133334477788884
No 242
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=96.51 E-value=0.0034 Score=55.06 Aligned_cols=75 Identities=17% Similarity=0.238 Sum_probs=52.2
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHH-hhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVA-RKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
.||||||+|.||.. ....+. . + ++| -++|+++++++.+.+.. .....++.. .+|+++ +++ .|+|+.++
T Consensus 13 ~~V~vIG~G~MG~~-iA~~la-a-G-~~V-~v~d~~~~~~~~~~~~l~~~~~~~i~~---~~~~~~-~~~--aDlVieav 81 (293)
T 1zej_A 13 MKVFVIGAGLMGRG-IAIAIA-S-K-HEV-VLQDVSEKALEAAREQIPEELLSKIEF---TTTLEK-VKD--CDIVMEAV 81 (293)
T ss_dssp CEEEEECCSHHHHH-HHHHHH-T-T-SEE-EEECSCHHHHHHHHHHSCGGGGGGEEE---ESSCTT-GGG--CSEEEECC
T ss_pred CeEEEEeeCHHHHH-HHHHHH-c-C-CEE-EEEECCHHHHHHHHHHHHHHHhCCeEE---eCCHHH-HcC--CCEEEEcC
Confidence 48999999999986 666676 4 3 565 57799999998877631 000012221 267776 554 89999999
Q ss_pred CCcccHH
Q 018445 82 AGQAQVD 88 (355)
Q Consensus 82 p~~~H~~ 88 (355)
|......
T Consensus 82 pe~~~vk 88 (293)
T 1zej_A 82 FEDLNTK 88 (293)
T ss_dssp CSCHHHH
T ss_pred cCCHHHH
Confidence 9998643
No 243
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.50 E-value=0.0031 Score=55.04 Aligned_cols=78 Identities=18% Similarity=0.140 Sum_probs=55.8
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCcccc-ccCcchhhhhcCCCccEEEEecC
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECV-WGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ell~~~~~D~V~I~tp 82 (355)
++.|+|+|.+|+. .+..|.+.+ +.-+.|++|++++++.+++.....+++.... +.++++++.+.+ .|+|+.+||
T Consensus 129 ~vlVlGaGG~g~a-ia~~L~~~G--~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~--~DiVInaTp 203 (283)
T 3jyo_A 129 SVVQVGAGGVGNA-VAYALVTHG--VQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAA--ADGVVNATP 203 (283)
T ss_dssp EEEEECCSHHHHH-HHHHHHHTT--CSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHH--SSEEEECSS
T ss_pred EEEEECCcHHHHH-HHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhc--CCEEEECCC
Confidence 7899999999975 677777764 5434788999999999887654444433221 111467777775 899999999
Q ss_pred Cccc
Q 018445 83 GQAQ 86 (355)
Q Consensus 83 ~~~H 86 (355)
-..+
T Consensus 204 ~Gm~ 207 (283)
T 3jyo_A 204 MGMP 207 (283)
T ss_dssp TTST
T ss_pred CCCC
Confidence 7765
No 244
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=96.49 E-value=0.02 Score=50.58 Aligned_cols=102 Identities=16% Similarity=0.152 Sum_probs=70.9
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeC--CHHHHHHHHHHHh--hhcCCccc--------------cccCcc
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSR--SEESAKSAAEVAR--KHFADVEC--------------VWGDNG 64 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~--~~~~~~~~~~~~~--~~~~~~~~--------------~~~~~~ 64 (355)
+||||=|.|+||+. .++++...++ ++||||-|+ +.+.+..+-+.=. ..+++... .+...+
T Consensus 2 ~kv~INGfGrIGr~-v~R~~~~~~~-~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~d 79 (332)
T 3pym_A 2 VRVAINGFGRIGRL-VMRIALSRPN-VEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVSHDDKHIIVDGKKIATYQERD 79 (332)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHSTT-CEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred eEEEEECCCcHHHH-HHHHHHhCCC-cEEEEEeCCCCCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEEEEeecc
Confidence 79999999999985 7777776665 999999997 6666555433100 00222100 000124
Q ss_pred hhhh-hcCCCccEEEEecCCcccHHHHHHHHHcC-CeEEEecCC
Q 018445 65 LEQI-IKEDSILGVAVVLAGQAQVDTSLKLLKAG-KHVIQEKPA 106 (355)
Q Consensus 65 ~~el-l~~~~~D~V~I~tp~~~H~~~~~~al~~G-khVl~EKP~ 106 (355)
++++ ..+.++|.|+=||.-..-.+.+.+.+++| |-|++--|.
T Consensus 80 p~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps 123 (332)
T 3pym_A 80 PANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPS 123 (332)
T ss_dssp GGGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCC
T ss_pred cccCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEECCCC
Confidence 4444 23457999999999999999999999999 789998874
No 245
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=96.48 E-value=0.0025 Score=56.82 Aligned_cols=67 Identities=10% Similarity=0.205 Sum_probs=47.6
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeC-CHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSR-SEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
.+|||||+|.||.. ....+...+ .+|+ ++|+ +++.. ... +. ++. + .++++++++. .|+|++++
T Consensus 147 ~~vgIIG~G~IG~~-~A~~l~~~G--~~V~-~~d~~~~~~~-~~~----~~--g~~--~-~~~l~ell~~--aDvVil~~ 210 (320)
T 1gdh_A 147 KTLGIYGFGSIGQA-LAKRAQGFD--MDID-YFDTHRASSS-DEA----SY--QAT--F-HDSLDSLLSV--SQFFSLNA 210 (320)
T ss_dssp CEEEEECCSHHHHH-HHHHHHTTT--CEEE-EECSSCCCHH-HHH----HH--TCE--E-CSSHHHHHHH--CSEEEECC
T ss_pred CEEEEECcCHHHHH-HHHHHHHCC--CEEE-EECCCCcChh-hhh----hc--CcE--E-cCCHHHHHhh--CCEEEEec
Confidence 48999999999986 777777654 6764 6688 76653 222 12 332 1 1589999986 89999999
Q ss_pred CCcc
Q 018445 82 AGQA 85 (355)
Q Consensus 82 p~~~ 85 (355)
|...
T Consensus 211 p~~~ 214 (320)
T 1gdh_A 211 PSTP 214 (320)
T ss_dssp CCCT
T ss_pred cCch
Confidence 9754
No 246
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=96.48 E-value=0.0043 Score=56.09 Aligned_cols=98 Identities=14% Similarity=0.033 Sum_probs=64.7
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|+|+|+|.+|.. ....|.+.+ .+|+ ++|+++++++.+++ ++ +. .+ .+.+++++ .+.|+++.|..
T Consensus 174 ktV~V~G~G~VG~~-~A~~L~~~G--akVv-v~D~~~~~l~~~a~---~~--ga--~~--v~~~~ll~-~~~DIvip~a~ 239 (364)
T 1leh_A 174 LAVSVQGLGNVAKA-LCKKLNTEG--AKLV-VTDVNKAAVSAAVA---EE--GA--DA--VAPNAIYG-VTCDIFAPCAL 239 (364)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CEEE-EECSCHHHHHHHHH---HH--CC--EE--CCGGGTTT-CCCSEEEECSC
T ss_pred CEEEEECchHHHHH-HHHHHHHCC--CEEE-EEcCCHHHHHHHHH---Hc--CC--EE--EChHHHhc-cCCcEeeccch
Confidence 48999999999985 677777765 6887 99999999888776 33 32 22 35677776 45899988754
Q ss_pred C-cccHHHHHHHHHcCCeEEEecCCCCCH-HHHHHHH
Q 018445 83 G-QAQVDTSLKLLKAGKHVIQEKPAAANI-SEIENAL 117 (355)
Q Consensus 83 ~-~~H~~~~~~al~~GkhVl~EKP~a~~~-~e~~~l~ 117 (355)
. ....+.+.. + |..+++|.--.... .++.+++
T Consensus 240 ~~~I~~~~~~~-l--g~~iV~e~An~p~t~~ea~~~L 273 (364)
T 1leh_A 240 GAVLNDFTIPQ-L--KAKVIAGSADNQLKDPRHGKYL 273 (364)
T ss_dssp SCCBSTTHHHH-C--CCSEECCSCSCCBSSHHHHHHH
T ss_pred HHHhCHHHHHh-C--CCcEEEeCCCCCcccHHHHHHH
Confidence 4 333343332 2 77788987443322 3444443
No 247
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=96.47 E-value=0.0024 Score=57.74 Aligned_cols=66 Identities=21% Similarity=0.210 Sum_probs=47.4
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||+. ....+...+ .+|+ ++|+++.. +...+ . ++. + .+++|+++. .|+|++++|
T Consensus 177 ktvGIIGlG~IG~~-vA~~l~~fG--~~V~-~~d~~~~~-~~~~~----~--g~~--~--~~l~ell~~--aDvV~l~~P 239 (365)
T 4hy3_A 177 SEIGIVGFGDLGKA-LRRVLSGFR--ARIR-VFDPWLPR-SMLEE----N--GVE--P--ASLEDVLTK--SDFIFVVAA 239 (365)
T ss_dssp SEEEEECCSHHHHH-HHHHHTTSC--CEEE-EECSSSCH-HHHHH----T--TCE--E--CCHHHHHHS--CSEEEECSC
T ss_pred CEEEEecCCcccHH-HHHhhhhCC--CEEE-EECCCCCH-HHHhh----c--Cee--e--CCHHHHHhc--CCEEEEcCc
Confidence 38999999999986 777777664 6775 56887532 22222 2 332 2 689999997 899999999
Q ss_pred Ccc
Q 018445 83 GQA 85 (355)
Q Consensus 83 ~~~ 85 (355)
...
T Consensus 240 lt~ 242 (365)
T 4hy3_A 240 VTS 242 (365)
T ss_dssp SSC
T ss_pred CCH
Confidence 764
No 248
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=96.46 E-value=0.0071 Score=56.67 Aligned_cols=82 Identities=11% Similarity=0.100 Sum_probs=50.4
Q ss_pred CceEEEEecccccchhccchhhhc-CCe-EEEEEEEeCCHHHHHHHHHHHhhhcCC--cc-ccccCcchhhhhcCCCccE
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEI-SDL-VSLKFIWSRSEESAKSAAEVARKHFAD--VE-CVWGDNGLEQIIKEDSILG 76 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~-~~~-~~vvai~d~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~ell~~~~~D~ 76 (355)
.+||+|||+|.++....+..|... ++- ..=+.++|+++++++...+......+. .+ ....++|+++.+++ .|+
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~--AD~ 105 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTD--VDF 105 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSS--CSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcC--CCE
Confidence 359999999997332233344443 121 344588999999988765433222111 11 11123688888886 899
Q ss_pred EEEecCCcc
Q 018445 77 VAVVLAGQA 85 (355)
Q Consensus 77 V~I~tp~~~ 85 (355)
|+++.|...
T Consensus 106 VViaag~~~ 114 (472)
T 1u8x_X 106 VMAHIRVGK 114 (472)
T ss_dssp EEECCCTTH
T ss_pred EEEcCCCcc
Confidence 999999843
No 249
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=96.45 E-value=0.0052 Score=58.85 Aligned_cols=95 Identities=20% Similarity=0.153 Sum_probs=68.4
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCH-------------------HHHHHHHHHHhhhcCCccccccC-
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSE-------------------ESAKSAAEVARKHFADVECVWGD- 62 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~- 62 (355)
-||.|||+|..|.. .+..|.+.+ +.=+.++|.+. .+++.+++..++..|++......
T Consensus 327 arVLIVGaGGLGs~-vA~~La~aG--VG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~~~ 403 (615)
T 4gsl_A 327 TKVLLLGAGTLGCY-VSRALIAWG--VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKL 403 (615)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECC
T ss_pred CeEEEECCCHHHHH-HHHHHHHcC--CCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEeec
Confidence 48999999999985 788888765 44456778865 57777777777777776533211
Q ss_pred -------------------cchhhhhcCCCccEEEEecCC-cccHHHHHHHHHcCCeEEE
Q 018445 63 -------------------NGLEQIIKEDSILGVAVVLAG-QAQVDTSLKLLKAGKHVIQ 102 (355)
Q Consensus 63 -------------------~~~~ell~~~~~D~V~I~tp~-~~H~~~~~~al~~GkhVl~ 102 (355)
++.+++++. .|+|+.||-+ ..+..+...|.+.||+++.
T Consensus 404 ~Ipm~gh~v~~e~~~~l~~~~l~~ll~~--~DlVvd~tDn~~tR~~ln~~c~~~~~PlI~ 461 (615)
T 4gsl_A 404 SIPMIGHKLVNEEAQHKDFDRLRALIKE--HDIIFLLVDSRESRWLPSLLSNIENKTVIN 461 (615)
T ss_dssp CCCCTTCCCSCHHHHHHHHHHHHHHHHH--CSEEEECCSSGGGTHHHHHHHHHTTCEEEE
T ss_pred cccccCccccchhhhcCCHHHHHHHhhc--CCEEEecCCCHHHHHHHHHHHHHcCCeEEE
Confidence 124556665 8999999887 5677788888888887664
No 250
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=96.43 E-value=0.00097 Score=59.42 Aligned_cols=65 Identities=8% Similarity=0.054 Sum_probs=47.1
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||.. ....+...+ .+|++ +|++++..+.+. . .+...++++++++ .|+|++++|
T Consensus 138 ktvGIiGlG~IG~~-vA~~l~~~G--~~V~~-~dr~~~~~~~~~--------~---~~~~~~l~ell~~--aDvV~l~lP 200 (324)
T 3evt_A 138 QQLLIYGTGQIGQS-LAAKASALG--MHVIG-VNTTGHPADHFH--------E---TVAFTATADALAT--ANFIVNALP 200 (324)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CEEEE-EESSCCCCTTCS--------E---EEEGGGCHHHHHH--CSEEEECCC
T ss_pred CeEEEECcCHHHHH-HHHHHHhCC--CEEEE-ECCCcchhHhHh--------h---ccccCCHHHHHhh--CCEEEEcCC
Confidence 48999999999986 777777765 67765 688765532211 1 1112789999987 899999999
Q ss_pred Cc
Q 018445 83 GQ 84 (355)
Q Consensus 83 ~~ 84 (355)
..
T Consensus 201 lt 202 (324)
T 3evt_A 201 LT 202 (324)
T ss_dssp CC
T ss_pred Cc
Confidence 65
No 251
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=96.42 E-value=0.0029 Score=47.68 Aligned_cols=99 Identities=17% Similarity=0.086 Sum_probs=67.7
Q ss_pred eEEEEeccc----ccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEE
Q 018445 4 RIAILGAGI----FVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 4 rigiiG~G~----~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I 79 (355)
+|+|||+.. .|.. .+..|.+.+ ++|..| +|.. ....+.+ .| .|+.++-+ +|+|+|
T Consensus 6 siAVVGaS~~~~~~g~~-v~~~L~~~g--~~V~pV---nP~~---------~~i~G~~-~y--~sl~dlp~---vDlavi 64 (122)
T 3ff4_A 6 KTLILGATPETNRYAYL-AAERLKSHG--HEFIPV---GRKK---------GEVLGKT-II--NERPVIEG---VDTVTL 64 (122)
T ss_dssp CEEEETCCSCTTSHHHH-HHHHHHHHT--CCEEEE---SSSC---------SEETTEE-CB--CSCCCCTT---CCEEEE
T ss_pred EEEEEccCCCCCCHHHH-HHHHHHHCC--CeEEEE---CCCC---------CcCCCee-cc--CChHHCCC---CCEEEE
Confidence 799999865 3443 566676654 566554 3332 1111443 23 77777753 999999
Q ss_pred ecCCcccHHHHHHHHHcC-CeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEE
Q 018445 80 VLAGQAQVDTSLKLLKAG-KHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWA 134 (355)
Q Consensus 80 ~tp~~~H~~~~~~al~~G-khVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~ 134 (355)
++|+..-.+++.+|.+.| |.|++. |-.. -+++.+.|+++ |+.+.
T Consensus 65 ~~p~~~v~~~v~e~~~~g~k~v~~~-~G~~----~~e~~~~a~~~------Girvv 109 (122)
T 3ff4_A 65 YINPQNQLSEYNYILSLKPKRVIFN-PGTE----NEELEEILSEN------GIEPV 109 (122)
T ss_dssp CSCHHHHGGGHHHHHHHCCSEEEEC-TTCC----CHHHHHHHHHT------TCEEE
T ss_pred EeCHHHHHHHHHHHHhcCCCEEEEC-CCCC----hHHHHHHHHHc------CCeEE
Confidence 999999999999999999 555543 3333 25889999994 87765
No 252
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=96.40 E-value=0.0048 Score=54.73 Aligned_cols=97 Identities=24% Similarity=0.174 Sum_probs=54.5
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhh-hc--CCcc--ccccCcchhhhhcCCCcc
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARK-HF--ADVE--CVWGDNGLEQIIKEDSIL 75 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~-~~--~~~~--~~~~~~~~~ell~~~~~D 75 (355)
|.+||+|||+|.||.. +...|.+.+ .+| .++++++ .+.+.+.... .. ++.. ..-.+++.++ +. ..|
T Consensus 1 M~mkI~IiGaGaiG~~-~a~~L~~~g--~~V-~~~~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~--~~D 71 (312)
T 3hn2_A 1 MSLRIAIVGAGALGLY-YGALLQRSG--EDV-HFLLRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IG--PMD 71 (312)
T ss_dssp ---CEEEECCSTTHHH-HHHHHHHTS--CCE-EEECSTT--HHHHHHTCEEEEETTCCEEESCCCEESCHHH-HC--CCS
T ss_pred CCCEEEEECcCHHHHH-HHHHHHHCC--CeE-EEEEcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCHHH-cC--CCC
Confidence 8899999999999985 777777654 355 4557765 2444431100 00 0110 0000145555 33 589
Q ss_pred EEEEecCCcccHHHHHHHHH---cCCe-EEEecCC
Q 018445 76 GVAVVLAGQAQVDTSLKLLK---AGKH-VIQEKPA 106 (355)
Q Consensus 76 ~V~I~tp~~~H~~~~~~al~---~Gkh-Vl~EKP~ 106 (355)
+|++++|+....+++..... .+.. |.+-|-+
T Consensus 72 ~vilavk~~~~~~~l~~l~~~l~~~~~iv~l~nGi 106 (312)
T 3hn2_A 72 LVLVGLKTFANSRYEELIRPLVEEGTQILTLQNGL 106 (312)
T ss_dssp EEEECCCGGGGGGHHHHHGGGCCTTCEEEECCSSS
T ss_pred EEEEecCCCCcHHHHHHHHhhcCCCCEEEEecCCC
Confidence 99999999988877766433 2333 3445544
No 253
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=96.40 E-value=0.0027 Score=57.64 Aligned_cols=68 Identities=18% Similarity=0.192 Sum_probs=49.1
Q ss_pred ceEEEEecccccchhccchhhhcCCeEE-EEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVS-LKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~-vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
.+|||||+|.||.. ....+...+ .+ | .++|+++...+...+ . ++.. ..+++++++. .|+|++++
T Consensus 165 ~tvgIIG~G~IG~~-vA~~l~~~G--~~~V-~~~d~~~~~~~~~~~----~--g~~~---~~~l~ell~~--aDvV~l~~ 229 (364)
T 2j6i_A 165 KTIATIGAGRIGYR-VLERLVPFN--PKEL-LYYDYQALPKDAEEK----V--GARR---VENIEELVAQ--ADIVTVNA 229 (364)
T ss_dssp CEEEEECCSHHHHH-HHHHHGGGC--CSEE-EEECSSCCCHHHHHH----T--TEEE---CSSHHHHHHT--CSEEEECC
T ss_pred CEEEEECcCHHHHH-HHHHHHhCC--CcEE-EEECCCccchhHHHh----c--CcEe---cCCHHHHHhc--CCEEEECC
Confidence 48999999999986 777777664 55 5 457888765554332 2 3321 1689999986 89999999
Q ss_pred CCcc
Q 018445 82 AGQA 85 (355)
Q Consensus 82 p~~~ 85 (355)
|...
T Consensus 230 P~t~ 233 (364)
T 2j6i_A 230 PLHA 233 (364)
T ss_dssp CCST
T ss_pred CCCh
Confidence 9864
No 254
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=96.39 E-value=0.0081 Score=53.37 Aligned_cols=80 Identities=14% Similarity=0.092 Sum_probs=46.2
Q ss_pred CCceEEEEecccccchhccchhhhcCCeE-EEEEEEeCCHHHHHHHHHHHhhhc---CCccccccCcchhhhhcCCCccE
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLV-SLKFIWSRSEESAKSAAEVARKHF---ADVECVWGDNGLEQIIKEDSILG 76 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~-~vvai~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ell~~~~~D~ 76 (355)
|.|||+|||+|.+|.. +...|...+. + +| .++|+++++++..+-...... +...... .++++ .+. +.|+
T Consensus 6 ~~mkI~IiGaG~vG~~-~a~~l~~~g~-~~~V-~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~-~~~--~aD~ 78 (319)
T 1lld_A 6 KPTKLAVIGAGAVGST-LAFAAAQRGI-AREI-VLEDIAKERVEAEVLDMQHGSSFYPTVSIDG-SDDPE-ICR--DADM 78 (319)
T ss_dssp -CCEEEEECCSHHHHH-HHHHHHHTTC-CSEE-EEECSSHHHHHHHHHHHHHTGGGSTTCEEEE-ESCGG-GGT--TCSE
T ss_pred CCCEEEEECCCHHHHH-HHHHHHhCCC-CCEE-EEEeCChhHHHHHHHHHHhhhhhcCCeEEEe-CCCHH-HhC--CCCE
Confidence 4579999999999985 6666665442 2 55 578999887763221111111 1111111 12554 344 4899
Q ss_pred EEEecCCcccH
Q 018445 77 VAVVLAGQAQV 87 (355)
Q Consensus 77 V~I~tp~~~H~ 87 (355)
|+++++.....
T Consensus 79 Vii~v~~~~~~ 89 (319)
T 1lld_A 79 VVITAGPRQKP 89 (319)
T ss_dssp EEECCCCCCCT
T ss_pred EEECCCCCCCC
Confidence 99999655443
No 255
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=96.39 E-value=0.0024 Score=57.05 Aligned_cols=66 Identities=11% Similarity=0.110 Sum_probs=47.9
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||.. ....+...+ .+|+ ++|+++.+.+...+ . ++. + .+++++++. .|+|++++|
T Consensus 146 ~tvGIIG~G~IG~~-vA~~l~~~G--~~V~-~~d~~~~~~~~~~~----~--g~~--~--~~l~ell~~--aDvV~l~~P 209 (330)
T 4e5n_A 146 ATVGFLGMGAIGLA-MADRLQGWG--ATLQ-YHEAKALDTQTEQR----L--GLR--Q--VACSELFAS--SDFILLALP 209 (330)
T ss_dssp CEEEEECCSHHHHH-HHHHTTTSC--CEEE-EECSSCCCHHHHHH----H--TEE--E--CCHHHHHHH--CSEEEECCC
T ss_pred CEEEEEeeCHHHHH-HHHHHHHCC--CEEE-EECCCCCcHhHHHh----c--Cce--e--CCHHHHHhh--CCEEEEcCC
Confidence 48999999999986 677777664 6764 56888744443332 2 332 2 689999987 799999999
Q ss_pred Cc
Q 018445 83 GQ 84 (355)
Q Consensus 83 ~~ 84 (355)
..
T Consensus 210 ~t 211 (330)
T 4e5n_A 210 LN 211 (330)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 256
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=96.36 E-value=0.0097 Score=52.72 Aligned_cols=76 Identities=22% Similarity=0.138 Sum_probs=47.4
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh----cCCccccccCcchhhhhcCCCccEEE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH----FADVECVWGDNGLEQIIKEDSILGVA 78 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ell~~~~~D~V~ 78 (355)
|||+|||+|.+|.. ....|...+-..+| .++|+++++++..+...... ..... ...++++++ +++ .|+|+
T Consensus 1 mkI~VIGaG~vG~~-la~~la~~~~g~~V-~l~D~~~~~~~~~~~~l~~~~~~~~~~~~-i~~t~d~~~-l~~--aDvVi 74 (310)
T 1guz_A 1 MKITVIGAGNVGAT-TAFRLAEKQLAREL-VLLDVVEGIPQGKALDMYESGPVGLFDTK-VTGSNDYAD-TAN--SDIVI 74 (310)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTCCSEE-EEECSSSSHHHHHHHHHHTTHHHHTCCCE-EEEESCGGG-GTT--CSEEE
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCCCCEE-EEEeCChhHHHHHHHhHHhhhhcccCCcE-EEECCCHHH-HCC--CCEEE
Confidence 58999999999985 56666653212354 67799998887654211111 11111 111267877 655 89999
Q ss_pred EecCCc
Q 018445 79 VVLAGQ 84 (355)
Q Consensus 79 I~tp~~ 84 (355)
+++|..
T Consensus 75 iav~~p 80 (310)
T 1guz_A 75 ITAGLP 80 (310)
T ss_dssp ECCSCC
T ss_pred EeCCCC
Confidence 999764
No 257
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=96.35 E-value=0.0081 Score=56.00 Aligned_cols=81 Identities=15% Similarity=0.122 Sum_probs=50.2
Q ss_pred CceEEEEecccc-cchhccchhhhc-CCe-EEEEEEEeCCH--HHHHHHHHHHhhhcC--Ccc-ccccCcchhhhhcCCC
Q 018445 2 APRIAILGAGIF-VKTQYIPRLAEI-SDL-VSLKFIWSRSE--ESAKSAAEVARKHFA--DVE-CVWGDNGLEQIIKEDS 73 (355)
Q Consensus 2 ~~rigiiG~G~~-~~~~~~~~l~~~-~~~-~~vvai~d~~~--~~~~~~~~~~~~~~~--~~~-~~~~~~~~~ell~~~~ 73 (355)
++||+|||+|++ +.. ++..|... ++- ..=+.++|+++ ++++..........+ +.+ ....++|+++.+++
T Consensus 7 ~~KIaVIGaGsv~~~a-l~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~g-- 83 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPE-LVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDG-- 83 (450)
T ss_dssp CEEEEEETTTCTTHHH-HHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTT--
T ss_pred CCEEEEECCCHHHHHH-HHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCC--
Confidence 679999999997 332 33334442 221 34457899999 988775443322211 111 12223688888886
Q ss_pred ccEEEEecCCcc
Q 018445 74 ILGVAVVLAGQA 85 (355)
Q Consensus 74 ~D~V~I~tp~~~ 85 (355)
.|+|+|+.|...
T Consensus 84 AD~VVitagv~~ 95 (450)
T 1s6y_A 84 ADFVTTQFRVGG 95 (450)
T ss_dssp CSEEEECCCTTH
T ss_pred CCEEEEcCCCCC
Confidence 899999999754
No 258
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.34 E-value=0.0027 Score=48.97 Aligned_cols=85 Identities=18% Similarity=0.191 Sum_probs=51.8
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCcccccc-Ccchhhhhc--CCCccEEEEe
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWG-DNGLEQIIK--EDSILGVAVV 80 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ell~--~~~~D~V~I~ 80 (355)
+|.|+|+|.+|.. ....|.+.+ .+|+ ++|+++++.+.+.+ . +.....+ .++.+.+.+ -.++|+|+++
T Consensus 8 ~v~I~G~G~iG~~-~a~~l~~~g--~~v~-~~d~~~~~~~~~~~----~--~~~~~~~d~~~~~~l~~~~~~~~d~vi~~ 77 (144)
T 2hmt_A 8 QFAVIGLGRFGGS-IVKELHRMG--HEVL-AVDINEEKVNAYAS----Y--ATHAVIANATEENELLSLGIRNFEYVIVA 77 (144)
T ss_dssp SEEEECCSHHHHH-HHHHHHHTT--CCCE-EEESCHHHHHTTTT----T--CSEEEECCTTCHHHHHTTTGGGCSEEEEC
T ss_pred cEEEECCCHHHHH-HHHHHHHCC--CEEE-EEeCCHHHHHHHHH----h--CCEEEEeCCCCHHHHHhcCCCCCCEEEEC
Confidence 6999999999985 777777654 4554 56888887765432 1 1111111 133333322 2358999999
Q ss_pred cCCccc--HHHHHHHHHcCC
Q 018445 81 LAGQAQ--VDTSLKLLKAGK 98 (355)
Q Consensus 81 tp~~~H--~~~~~~al~~Gk 98 (355)
+++..+ ..++..+-+.|.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~ 97 (144)
T 2hmt_A 78 IGANIQASTLTTLLLKELDI 97 (144)
T ss_dssp CCSCHHHHHHHHHHHHHTTC
T ss_pred CCCchHHHHHHHHHHHHcCC
Confidence 998533 344455555563
No 259
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=96.31 E-value=0.0036 Score=56.13 Aligned_cols=66 Identities=20% Similarity=0.323 Sum_probs=48.7
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||.. ....+...+ .+| .++|+++++ +...+ . ++. + .++++++++ .|+|++++|
T Consensus 151 ~~vgIIG~G~iG~~-iA~~l~~~G--~~V-~~~d~~~~~-~~~~~----~--g~~--~--~~l~~~l~~--aDvVil~vp 213 (334)
T 2dbq_A 151 KTIGIIGLGRIGQA-IAKRAKGFN--MRI-LYYSRTRKE-EVERE----L--NAE--F--KPLEDLLRE--SDFVVLAVP 213 (334)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CEE-EEECSSCCH-HHHHH----H--CCE--E--CCHHHHHHH--CSEEEECCC
T ss_pred CEEEEEccCHHHHH-HHHHHHhCC--CEE-EEECCCcch-hhHhh----c--Ccc--c--CCHHHHHhh--CCEEEECCC
Confidence 58999999999986 777777654 576 467888876 33222 2 332 2 689999986 899999999
Q ss_pred Ccc
Q 018445 83 GQA 85 (355)
Q Consensus 83 ~~~ 85 (355)
...
T Consensus 214 ~~~ 216 (334)
T 2dbq_A 214 LTR 216 (334)
T ss_dssp CCT
T ss_pred CCh
Confidence 875
No 260
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=96.29 E-value=0.0068 Score=57.98 Aligned_cols=95 Identities=20% Similarity=0.157 Sum_probs=66.5
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCC-------------------HHHHHHHHHHHhhhcCCccccccC-
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRS-------------------EESAKSAAEVARKHFADVECVWGD- 62 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~- 62 (355)
-||.|||+|..|.. .+..|.+.+ +.=+.++|.+ ..+++.+++..++..|++......
T Consensus 328 ~kVLIVGaGGLGs~-va~~La~aG--VG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~~~ 404 (598)
T 3vh1_A 328 TKVLLLGAGTLGCY-VSRALIAWG--VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKL 404 (598)
T ss_dssp CEEEEECCSHHHHH-HHHHHHTTT--CCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEECC
T ss_pred CeEEEECCCHHHHH-HHHHHHHcC--CCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEEec
Confidence 48999999999985 778887765 4444667765 357888888777767776432211
Q ss_pred -------------------cchhhhhcCCCccEEEEecCCc-ccHHHHHHHHHcCCeEEE
Q 018445 63 -------------------NGLEQIIKEDSILGVAVVLAGQ-AQVDTSLKLLKAGKHVIQ 102 (355)
Q Consensus 63 -------------------~~~~ell~~~~~D~V~I~tp~~-~H~~~~~~al~~GkhVl~ 102 (355)
+++++++++ .|+|+.||.+. .+..+...|.+.|++++.
T Consensus 405 ~I~~pgh~i~~~~~~~l~~~~l~~li~~--~DvVvdatDn~~tR~lin~~c~~~~~plI~ 462 (598)
T 3vh1_A 405 SIPMIGHKLVNEEAQHKDFDRLRALIKE--HDIIFLLVDSRESRWLPSLLSNIENKTVIN 462 (598)
T ss_dssp CCCCSSCCCCSHHHHHHHHHHHHHHHHH--CSEEEECCSBGGGTHHHHHHHHHTTCEEEE
T ss_pred cccccCcccccccccccCHHHHHHHHhc--CCEEEECCCCHHHHHHHHHHHHhcCCCEEE
Confidence 223556664 89999998874 567777888888887664
No 261
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=96.27 E-value=0.0066 Score=53.96 Aligned_cols=79 Identities=13% Similarity=0.070 Sum_probs=46.6
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCc--cccccCcchhhhhcCCCccEEEE
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADV--ECVWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ell~~~~~D~V~I 79 (355)
.+||+|||+|.+|.. .+..+...+- +.-+.++|+++++++..+.......+.. ......++++ .+++ .|+|++
T Consensus 6 ~~kI~IIGaG~vG~s-la~~l~~~~~-~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~-al~~--aDvVii 80 (316)
T 1ldn_A 6 GARVVVIGAGFVGAS-YVFALMNQGI-ADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYD-DCRD--ADLVVI 80 (316)
T ss_dssp SCEEEEECCSHHHHH-HHHHHHHHTC-CSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGG-GTTT--CSEEEE
T ss_pred CCEEEEECcCHHHHH-HHHHHHhCCC-CCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHH-HhCC--CCEEEE
Confidence 469999999999986 5555654432 3334677999987765433222221111 1111113443 4554 899999
Q ss_pred ecCCcc
Q 018445 80 VLAGQA 85 (355)
Q Consensus 80 ~tp~~~ 85 (355)
+.|...
T Consensus 81 a~~~~~ 86 (316)
T 1ldn_A 81 CAGANQ 86 (316)
T ss_dssp CCSCCC
T ss_pred cCCCCC
Confidence 988754
No 262
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=96.26 E-value=0.004 Score=55.76 Aligned_cols=66 Identities=17% Similarity=0.092 Sum_probs=47.8
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||.. ....+...+ .+|+ ++|+++... .+. .. ++. + .+++++++. .|+|++++|
T Consensus 166 ~tvgIIGlG~IG~~-vA~~l~~~G--~~V~-~~d~~~~~~-~~~----~~--g~~--~--~~l~ell~~--aDvV~l~~P 228 (335)
T 2g76_A 166 KTLGILGLGRIGRE-VATRMQSFG--MKTI-GYDPIISPE-VSA----SF--GVQ--Q--LPLEEIWPL--CDFITVHTP 228 (335)
T ss_dssp CEEEEECCSHHHHH-HHHHHHTTT--CEEE-EECSSSCHH-HHH----HT--TCE--E--CCHHHHGGG--CSEEEECCC
T ss_pred CEEEEEeECHHHHH-HHHHHHHCC--CEEE-EECCCcchh-hhh----hc--Cce--e--CCHHHHHhc--CCEEEEecC
Confidence 48999999999986 777777664 6764 568876652 221 22 332 2 589999986 899999999
Q ss_pred Ccc
Q 018445 83 GQA 85 (355)
Q Consensus 83 ~~~ 85 (355)
...
T Consensus 229 ~t~ 231 (335)
T 2g76_A 229 LLP 231 (335)
T ss_dssp CCT
T ss_pred CCH
Confidence 864
No 263
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=96.24 E-value=0.0066 Score=54.07 Aligned_cols=72 Identities=13% Similarity=0.161 Sum_probs=46.5
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh----cCCccccccCcchhhhhcCCCccEEE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH----FADVECVWGDNGLEQIIKEDSILGVA 78 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ell~~~~~D~V~ 78 (355)
+||+|||+|.+|.. ....+...+- ++ +.++|+++++++..+...... ..... ...++|+ +.+++ .|+|+
T Consensus 5 ~kI~VIGaG~vG~~-ia~~la~~g~-~~-v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~-i~~t~d~-~al~~--aD~Vi 77 (322)
T 1t2d_A 5 AKIVLVGSGMIGGV-MATLIVQKNL-GD-VVLFDIVKNMPHGKALDTSHTNVMAYSNCK-VSGSNTY-DDLAG--ADVVI 77 (322)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTC-CE-EEEECSSSSHHHHHHHHHHTHHHHHTCCCC-EEEECCG-GGGTT--CSEEE
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCC-Ce-EEEEeCCHHHHHHHHHHHHhhhhhcCCCcE-EEECCCH-HHhCC--CCEEE
Confidence 59999999999985 5555555432 47 788999998887644432221 11111 1112677 55665 89999
Q ss_pred Eec
Q 018445 79 VVL 81 (355)
Q Consensus 79 I~t 81 (355)
++.
T Consensus 78 ~a~ 80 (322)
T 1t2d_A 78 VTA 80 (322)
T ss_dssp ECC
T ss_pred EeC
Confidence 997
No 264
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=96.24 E-value=0.0078 Score=52.25 Aligned_cols=75 Identities=17% Similarity=0.100 Sum_probs=49.9
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.++.|+|+|.+|+. .+..|.+.+ .+| .+++|++++++.+++...... .+. . .+++++.+ .+.|+|+.+||
T Consensus 120 ~~vlvlGaGg~g~a-~a~~L~~~G--~~v-~v~~R~~~~a~~l~~~~~~~~-~~~--~--~~~~~~~~-~~~DivIn~t~ 189 (272)
T 1p77_A 120 QHVLILGAGGATKG-VLLPLLQAQ--QNI-VLANRTFSKTKELAERFQPYG-NIQ--A--VSMDSIPL-QTYDLVINATS 189 (272)
T ss_dssp CEEEEECCSHHHHT-THHHHHHTT--CEE-EEEESSHHHHHHHHHHHGGGS-CEE--E--EEGGGCCC-SCCSEEEECCC
T ss_pred CEEEEECCcHHHHH-HHHHHHHCC--CEE-EEEECCHHHHHHHHHHccccC-CeE--E--eeHHHhcc-CCCCEEEECCC
Confidence 37999999999975 777787765 455 578999999999887432211 111 1 34555433 36999999999
Q ss_pred CcccH
Q 018445 83 GQAQV 87 (355)
Q Consensus 83 ~~~H~ 87 (355)
...+.
T Consensus 190 ~~~~~ 194 (272)
T 1p77_A 190 AGLSG 194 (272)
T ss_dssp C----
T ss_pred CCCCC
Confidence 88763
No 265
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=96.23 E-value=0.011 Score=52.95 Aligned_cols=107 Identities=17% Similarity=0.092 Sum_probs=76.0
Q ss_pred eEEEEecccccchhccchh---hhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEe
Q 018445 4 RIAILGAGIFVKTQYIPRL---AEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l---~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
|+.|.+.|.++.. +.+.. .+.++ .++||+.|.+ ...+.+.+... ...+++.. .|++++++ .++|+++|.
T Consensus 9 ~~vi~~~g~~~~~-~aKta~gl~r~~~-~~iVgvid~~-~~G~d~ge~~g-~~~gipi~---~~l~~al~-~~~d~lvig 80 (349)
T 2obn_A 9 RVAILLHEGTTGT-IGKTGLALLRYSE-APIVAVIDRN-CAGQSLREITG-IYRYVPIV---KSVEAALE-YKPQVLVIG 80 (349)
T ss_dssp CEEEECTTTSSSS-SCHHHHHHHHHCC-SCEEEEECGG-GTTSCHHHHHC-CCSCCCEE---SSHHHHGG-GCCSEEEEC
T ss_pred cEEEEeCCCCCcH-HHHHhHHhhhcCC-CcEEEEEeCC-CCCCcHHHhcC-CcCCCCcc---CCHHHHHh-CCCCEEEEE
Confidence 7899999999864 66555 66666 7999999987 33333333221 12245543 89999996 469999999
Q ss_pred cCCc------ccHHHHHHHHHcCCeEEE--ecCCCCCHHHHHHHHHHhhc
Q 018445 81 LAGQ------AQVDTSLKLLKAGKHVIQ--EKPAAANISEIENALSRYNS 122 (355)
Q Consensus 81 tp~~------~H~~~~~~al~~GkhVl~--EKP~a~~~~e~~~l~~~a~~ 122 (355)
+.|. .-.+.+.+||++|++|.. +-|++.+++ |.++|++
T Consensus 81 ~a~~gG~l~~~~~~~i~~Al~~G~~Vvsglh~~l~~~pe----l~~~A~~ 126 (349)
T 2obn_A 81 IAPKGGGIPDDYWIELKTALQAGMSLVNGLHTPLANIPD----LNALLQP 126 (349)
T ss_dssp CCCCCC-SCGGGHHHHHHHHHTTCEEEECSSSCCTTCHH----HHHHCCT
T ss_pred ecCCCCCCCHHHHHHHHHHHHcCCcEEeCccchhhCCHH----HHHHHHc
Confidence 8443 446889999999999853 337777776 7777776
No 266
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=96.23 E-value=0.0031 Score=56.42 Aligned_cols=67 Identities=16% Similarity=0.259 Sum_probs=48.4
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
++|||||+|.||.. ....+...+ .+| .++|+++++.+... +. ++. + .++++++++ .|+|++++|
T Consensus 156 ~~vgIIG~G~iG~~-iA~~l~~~G--~~V-~~~d~~~~~~~~~~----~~--g~~--~--~~l~e~l~~--aDvVi~~vp 219 (330)
T 2gcg_A 156 STVGIIGLGRIGQA-IARRLKPFG--VQR-FLYTGRQPRPEEAA----EF--QAE--F--VSTPELAAQ--SDFIVVACS 219 (330)
T ss_dssp CEEEEECCSHHHHH-HHHHHGGGT--CCE-EEEESSSCCHHHHH----TT--TCE--E--CCHHHHHHH--CSEEEECCC
T ss_pred CEEEEECcCHHHHH-HHHHHHHCC--CEE-EEECCCCcchhHHH----hc--Cce--e--CCHHHHHhh--CCEEEEeCC
Confidence 58999999999986 677777654 565 46788776655432 22 332 2 478999886 899999999
Q ss_pred Ccc
Q 018445 83 GQA 85 (355)
Q Consensus 83 ~~~ 85 (355)
...
T Consensus 220 ~~~ 222 (330)
T 2gcg_A 220 LTP 222 (330)
T ss_dssp CCT
T ss_pred CCh
Confidence 863
No 267
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=96.20 E-value=0.0066 Score=52.89 Aligned_cols=73 Identities=18% Similarity=0.153 Sum_probs=52.3
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecCC
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLAG 83 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp~ 83 (355)
++.|+|+|.+|+. .+..|.+.+ +.-+.|++|++++++.+++...... .+.. .+++++. .+.|+|+.+||.
T Consensus 128 ~vlvlGaGg~g~a-ia~~L~~~G--~~~v~v~~R~~~~a~~la~~~~~~~-~~~~----~~~~~l~--~~aDiIInaTp~ 197 (281)
T 3o8q_A 128 TILLIGAGGAARG-VLKPLLDQQ--PASITVTNRTFAKAEQLAELVAAYG-EVKA----QAFEQLK--QSYDVIINSTSA 197 (281)
T ss_dssp EEEEECCSHHHHH-HHHHHHTTC--CSEEEEEESSHHHHHHHHHHHGGGS-CEEE----EEGGGCC--SCEEEEEECSCC
T ss_pred EEEEECchHHHHH-HHHHHHhcC--CCeEEEEECCHHHHHHHHHHhhccC-CeeE----eeHHHhc--CCCCEEEEcCcC
Confidence 7999999999975 777777654 4334788999999999887543221 1211 3566654 469999999999
Q ss_pred ccc
Q 018445 84 QAQ 86 (355)
Q Consensus 84 ~~H 86 (355)
..+
T Consensus 198 gm~ 200 (281)
T 3o8q_A 198 SLD 200 (281)
T ss_dssp CC-
T ss_pred CCC
Confidence 875
No 268
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=96.19 E-value=0.0036 Score=55.41 Aligned_cols=66 Identities=15% Similarity=0.203 Sum_probs=48.2
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||.. ....+...+ .+| .++|+++++ +.+. +. ++. + .+++++++. .|+|++++|
T Consensus 143 ~~vgIiG~G~IG~~-~A~~l~~~G--~~V-~~~d~~~~~-~~~~----~~--g~~--~--~~l~ell~~--aDvV~l~~p 205 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQ-VAKIANALG--MNI-LLYDPYPNE-ERAK----EV--NGK--F--VDLETLLKE--SDVVTIHVP 205 (307)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CEE-EEECSSCCH-HHHH----HT--TCE--E--CCHHHHHHH--CSEEEECCC
T ss_pred ceEEEEccCHHHHH-HHHHHHHCC--CEE-EEECCCCCh-hhHh----hc--Ccc--c--cCHHHHHhh--CCEEEEecC
Confidence 48999999999986 777777765 676 467888776 3222 22 332 2 579999986 899999999
Q ss_pred Ccc
Q 018445 83 GQA 85 (355)
Q Consensus 83 ~~~ 85 (355)
...
T Consensus 206 ~~~ 208 (307)
T 1wwk_A 206 LVE 208 (307)
T ss_dssp CST
T ss_pred CCh
Confidence 754
No 269
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=96.16 E-value=0.023 Score=50.28 Aligned_cols=100 Identities=17% Similarity=0.183 Sum_probs=69.2
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh------cCCccc--------------ccc
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH------FADVEC--------------VWG 61 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~------~~~~~~--------------~~~ 61 (355)
.+||||=|.|+||+. .++++...++ ++||||-|+. .++..+-.+ +| +++... .+.
T Consensus 4 ~~kv~INGfGrIGr~-v~Ra~~~~~~-~~ivaINd~~--d~~~~a~ll-kyDS~hG~f~~~v~~~~~~l~inGk~I~v~~ 78 (345)
T 4dib_A 4 MTRVAINGFGRIGRM-VFRQAIKESA-FEIVAINASY--PSETLAHLI-KYDTVHGKFDGTVEAFEDHLLVDGKMIRLLN 78 (345)
T ss_dssp CCEEEEECCSHHHHH-HHHHHTTCSS-SEEEEEECSS--CHHHHHHHH-HEETTTEECSSCEEECSSEEEETTEEEEEEC
T ss_pred cEEEEEECCCcHHHH-HHHHHHhCCC-ceEEEEcCCC--CHHHHHHHh-cccCCCCCCCCcEEEcCCEEEECCEEEEEee
Confidence 479999999999985 7777776655 9999999984 333333222 12 222100 000
Q ss_pred Ccchhhh-hcCCCccEEEEecCCcccHHHHHHHHHcC-CeEEEecCC
Q 018445 62 DNGLEQI-IKEDSILGVAVVLAGQAQVDTSLKLLKAG-KHVIQEKPA 106 (355)
Q Consensus 62 ~~~~~el-l~~~~~D~V~I~tp~~~H~~~~~~al~~G-khVl~EKP~ 106 (355)
..+++++ ..+.++|.|+=||.-..-.+.+...+++| |-|++--|.
T Consensus 79 e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps 125 (345)
T 4dib_A 79 NRDPKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPG 125 (345)
T ss_dssp CSCGGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred cCChhhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCC
Confidence 1234443 23457999999999999999999999999 789998774
No 270
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.15 E-value=0.0056 Score=54.52 Aligned_cols=75 Identities=17% Similarity=0.105 Sum_probs=46.9
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcC----CccccccCcchhhhhcCCCccEE
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFA----DVECVWGDNGLEQIIKEDSILGV 77 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ell~~~~~D~V 77 (355)
.+||+|||+|.+|.. .+..|...+- +.=+.++|+++++++..+.......| .+.. + .++++ .+++ .|+|
T Consensus 5 ~~kI~ViGaG~vG~~-~a~~l~~~~~-~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i-~-~~~~~-a~~~--aDvV 77 (326)
T 3pqe_A 5 VNKVALIGAGFVGSS-YAFALINQGI-TDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKT-S-YGTYE-DCKD--ADIV 77 (326)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHHTC-CSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEE-E-EECGG-GGTT--CSEE
T ss_pred CCEEEEECCCHHHHH-HHHHHHhCCC-CceEEEEecchHHHHHHHHHHHhccccccCCeEE-E-eCcHH-HhCC--CCEE
Confidence 469999999999985 6666765542 33346779999988774432222222 2221 1 24554 4444 8999
Q ss_pred EEecCC
Q 018445 78 AVVLAG 83 (355)
Q Consensus 78 ~I~tp~ 83 (355)
+|+...
T Consensus 78 vi~ag~ 83 (326)
T 3pqe_A 78 CICAGA 83 (326)
T ss_dssp EECCSC
T ss_pred EEeccc
Confidence 998644
No 271
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=96.13 E-value=0.0015 Score=57.95 Aligned_cols=65 Identities=25% Similarity=0.372 Sum_probs=46.2
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||+. ....+...+ .+|++ +|++++..+ ++...+...+++|++++ .|+|++++|
T Consensus 140 ~tvGIiG~G~IG~~-vA~~l~~~G--~~V~~-~dr~~~~~~-----------~~~~~~~~~~l~ell~~--aDiV~l~~P 202 (315)
T 3pp8_A 140 FSVGIMGAGVLGAK-VAESLQAWG--FPLRC-WSRSRKSWP-----------GVESYVGREELRAFLNQ--TRVLINLLP 202 (315)
T ss_dssp CCEEEECCSHHHHH-HHHHHHTTT--CCEEE-EESSCCCCT-----------TCEEEESHHHHHHHHHT--CSEEEECCC
T ss_pred CEEEEEeeCHHHHH-HHHHHHHCC--CEEEE-EcCCchhhh-----------hhhhhcccCCHHHHHhh--CCEEEEecC
Confidence 58999999999986 777777664 67754 577765432 12111112689999997 799999999
Q ss_pred Cc
Q 018445 83 GQ 84 (355)
Q Consensus 83 ~~ 84 (355)
..
T Consensus 203 lt 204 (315)
T 3pp8_A 203 NT 204 (315)
T ss_dssp CC
T ss_pred Cc
Confidence 65
No 272
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=96.13 E-value=0.0022 Score=57.12 Aligned_cols=103 Identities=16% Similarity=0.087 Sum_probs=65.1
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCC-HHHHHHHHHHHh--hhcCCcc-------------c-cccCc
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRS-EESAKSAAEVAR--KHFADVE-------------C-VWGDN 63 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~-~~~~~~~~~~~~--~~~~~~~-------------~-~~~~~ 63 (355)
|++||||.|.|++|+. .++.+.+. + ++||+|-|+. .+....+-+.-. ..+++.. . .+...
T Consensus 20 ~~~kVaInGfGrIGr~-vlr~l~e~-~-~~ivaIndl~d~~~~a~llkydS~hG~f~~~v~~~~~~l~i~Gk~I~v~~~~ 96 (356)
T 3hja_A 20 GSMKLAINGFGRIGRN-VFKIAFER-G-IDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVESRDGAIVVDGREIKIIAER 96 (356)
T ss_dssp --CEEEEECCSHHHHH-HHHHHHHT-T-CEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCS
T ss_pred CCeEEEEECCCHHHHH-HHHHHHHC-C-CCEEEEeCCCCHHHhhhhhccccCCCCCCCCEEEcCCEEEECCEEEEEEEcC
Confidence 5689999999999985 78887765 4 9999999883 222222221000 0011110 0 00012
Q ss_pred chhhhh-cCCCccEEEEecCCccc----HHHHHHHHH-cC-CeEEEecCC
Q 018445 64 GLEQII-KEDSILGVAVVLAGQAQ----VDTSLKLLK-AG-KHVIQEKPA 106 (355)
Q Consensus 64 ~~~ell-~~~~~D~V~I~tp~~~H----~~~~~~al~-~G-khVl~EKP~ 106 (355)
+.+++- .+.++|.|+=||....- .+.+...++ +| |.|++--|-
T Consensus 97 dp~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps 146 (356)
T 3hja_A 97 DPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPA 146 (356)
T ss_dssp SGGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCC
T ss_pred ChhhCCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCC
Confidence 344331 23469999999988887 788888899 88 789998885
No 273
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=96.12 E-value=0.0025 Score=56.70 Aligned_cols=66 Identities=17% Similarity=0.160 Sum_probs=46.8
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||+. ....+...+ .+|+ ++|+++...+.+ ... +.+.+++|++++ .|+|++++|
T Consensus 141 ~tvGIIGlG~IG~~-vA~~l~~~G--~~V~-~~dr~~~~~~~~--------~~~---~~~~~l~ell~~--aDvV~l~lP 203 (324)
T 3hg7_A 141 RTLLILGTGSIGQH-IAHTGKHFG--MKVL-GVSRSGRERAGF--------DQV---YQLPALNKMLAQ--ADVIVSVLP 203 (324)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CEEE-EECSSCCCCTTC--------SEE---ECGGGHHHHHHT--CSEEEECCC
T ss_pred ceEEEEEECHHHHH-HHHHHHhCC--CEEE-EEcCChHHhhhh--------hcc---cccCCHHHHHhh--CCEEEEeCC
Confidence 48999999999986 777777764 6775 458876432211 011 112789999987 899999999
Q ss_pred Ccc
Q 018445 83 GQA 85 (355)
Q Consensus 83 ~~~ 85 (355)
...
T Consensus 204 lt~ 206 (324)
T 3hg7_A 204 ATR 206 (324)
T ss_dssp CCS
T ss_pred CCH
Confidence 653
No 274
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=96.11 E-value=0.009 Score=53.10 Aligned_cols=74 Identities=14% Similarity=0.144 Sum_probs=45.9
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHH-hh--hc-CCccccccCcchhhhhcCCCccEE
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVA-RK--HF-ADVECVWGDNGLEQIIKEDSILGV 77 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~-~~--~~-~~~~~~~~~~~~~ell~~~~~D~V 77 (355)
.+||+|||+|.+|.. ....+...+- .+ +.++|+++++++...... .. .. ...... .++++ +.+++ .|+|
T Consensus 4 ~~kI~VIGaG~~G~~-ia~~la~~g~-~~-V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~-~t~d~-~a~~~--aDiV 76 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGN-IAYIVGKDNL-AD-VVLFDIAEGIPQGKALDITHSMVMFGSTSKVI-GTDDY-ADISG--SDVV 76 (317)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHHTC-CE-EEEECSSSSHHHHHHHHHHHHHHHHTCCCCEE-EESCG-GGGTT--CSEE
T ss_pred CCEEEEECCCHHHHH-HHHHHHhCCC-ce-EEEEeCCchHHHHHHHHHHhhhhhcCCCcEEE-ECCCH-HHhCC--CCEE
Confidence 369999999999985 6666665542 26 678899988877642111 11 00 011111 12567 55554 8999
Q ss_pred EEecC
Q 018445 78 AVVLA 82 (355)
Q Consensus 78 ~I~tp 82 (355)
+++.+
T Consensus 77 i~avg 81 (317)
T 2ewd_A 77 IITAS 81 (317)
T ss_dssp EECCC
T ss_pred EEeCC
Confidence 99984
No 275
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.11 E-value=0.0065 Score=52.89 Aligned_cols=117 Identities=10% Similarity=-0.034 Sum_probs=72.6
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecCC
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLAG 83 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp~ 83 (355)
++.|+|+|.+++. .+..|.+.+ +.-+.|++|++++++.+++ +. .. .. ++++++ + +.|+|+.+||-
T Consensus 124 ~vlvlGaGGaara-ia~~L~~~G--~~~v~v~nRt~~ka~~La~---~~--~~-~~--~~~l~~-l---~~DivInaTp~ 188 (282)
T 3fbt_A 124 ICVVLGSGGAARA-VLQYLKDNF--AKDIYVVTRNPEKTSEIYG---EF--KV-IS--YDELSN-L---KGDVIINCTPK 188 (282)
T ss_dssp EEEEECSSTTHHH-HHHHHHHTT--CSEEEEEESCHHHHHHHCT---TS--EE-EE--HHHHTT-C---CCSEEEECSST
T ss_pred EEEEECCcHHHHH-HHHHHHHcC--CCEEEEEeCCHHHHHHHHH---hc--Cc-cc--HHHHHh-c---cCCEEEECCcc
Confidence 7999999999875 677777764 5334788999999988775 22 11 11 134444 2 58999999998
Q ss_pred cccHH-----HHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHH
Q 018445 84 QAQVD-----TSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAF 145 (355)
Q Consensus 84 ~~H~~-----~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~ 145 (355)
..+.. +-...++.+ .+.++= .-++.+ -.+++.|++ .|..+.-|..+-...+.
T Consensus 189 Gm~~~~~~~pi~~~~l~~~-~~v~Dl--vY~P~~-T~ll~~A~~------~G~~~~~Gl~MLv~Qa~ 245 (282)
T 3fbt_A 189 GMYPKEGESPVDKEVVAKF-SSAVDL--IYNPVE-TLFLKYARE------SGVKAVNGLYMLVSQAA 245 (282)
T ss_dssp TSTTSTTCCSSCHHHHTTC-SEEEES--CCSSSS-CHHHHHHHH------TTCEEECSHHHHHHHHH
T ss_pred CccCCCccCCCCHHHcCCC-CEEEEE--eeCCCC-CHHHHHHHH------CcCeEeCcHHHHHHHHH
Confidence 65432 334555554 444551 122222 235677777 47777777665544433
No 276
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=96.09 E-value=0.009 Score=56.27 Aligned_cols=80 Identities=13% Similarity=0.117 Sum_probs=52.7
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhc-----CC-------------ccccccCcch
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHF-----AD-------------VECVWGDNGL 65 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~-----~~-------------~~~~~~~~~~ 65 (355)
||||||+|.||.. ....+.+.+ .+| -++|+++++++.+.+...+.. .+ +.. ++|+
T Consensus 7 kVgVIGaG~MG~~-IA~~la~aG--~~V-~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~---~~~~ 79 (483)
T 3mog_A 7 TVAVIGSGTMGAG-IAEVAASHG--HQV-LLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIP---VTDI 79 (483)
T ss_dssp CEEEECCSHHHHH-HHHHHHHTT--CCE-EEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEE---ECCG
T ss_pred EEEEECcCHHHHH-HHHHHHHCC--CeE-EEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeE---eCCH
Confidence 9999999999986 666776654 455 567999999988765321110 01 111 2567
Q ss_pred hhhhcCCCccEEEEecCCcccH--HHHHHH
Q 018445 66 EQIIKEDSILGVAVVLAGQAQV--DTSLKL 93 (355)
Q Consensus 66 ~ell~~~~~D~V~I~tp~~~H~--~~~~~a 93 (355)
++ +++ .|+|+.++|..... ++..+.
T Consensus 80 ~~-~~~--aDlVIeAVpe~~~vk~~v~~~l 106 (483)
T 3mog_A 80 HA-LAA--ADLVIEAASERLEVKKALFAQL 106 (483)
T ss_dssp GG-GGG--CSEEEECCCCCHHHHHHHHHHH
T ss_pred HH-hcC--CCEEEEcCCCcHHHHHHHHHHH
Confidence 53 554 89999999998543 444443
No 277
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=96.08 E-value=0.012 Score=51.95 Aligned_cols=77 Identities=16% Similarity=0.147 Sum_probs=44.0
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhc---CCccccccCcchhhhhcCCCccEEEE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHF---ADVECVWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ell~~~~~D~V~I 79 (355)
+||+|||+|.+|.. ....+...+. +.-+.++|+++++++..+....... +...... ++++ .+++ .|+|++
T Consensus 1 mkI~VIGaG~vG~~-la~~la~~g~-~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~--~~~~-a~~~--aDvVIi 73 (304)
T 2v6b_A 1 MKVGVVGTGFVGST-AAFALVLRGS-CSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH--GGHS-ELAD--AQVVIL 73 (304)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTC-CSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE--ECGG-GGTT--CSEEEE
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCC-CCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE--CCHH-HhCC--CCEEEE
Confidence 58999999999985 5656655432 2235778999988775443221111 1111111 3554 3444 899999
Q ss_pred ecCCccc
Q 018445 80 VLAGQAQ 86 (355)
Q Consensus 80 ~tp~~~H 86 (355)
+.+...+
T Consensus 74 ~~~~~~~ 80 (304)
T 2v6b_A 74 TAGANQK 80 (304)
T ss_dssp CC-----
T ss_pred cCCCCCC
Confidence 9976554
No 278
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=96.07 E-value=0.0049 Score=54.33 Aligned_cols=88 Identities=16% Similarity=0.158 Sum_probs=55.5
Q ss_pred CceEEEEe-cccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEe
Q 018445 2 APRIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 2 ~~rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
..||+||| +|.||.. ....|.+.+ .+| .++|++++ ++.++.+++ .|+|+++
T Consensus 21 ~~~I~iIGg~G~mG~~-la~~l~~~G--~~V-~~~~~~~~----------------------~~~~~~~~~--aDvVila 72 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGL-FARYLRASG--YPI-SILDREDW----------------------AVAESILAN--ADVVIVS 72 (298)
T ss_dssp CCCEEEETTTSHHHHH-HHHHHHTTT--CCE-EEECTTCG----------------------GGHHHHHTT--CSEEEEC
T ss_pred CCEEEEEcCCCHHHHH-HHHHHHhCC--CeE-EEEECCcc----------------------cCHHHHhcC--CCEEEEe
Confidence 34899999 9999985 778887654 455 35577653 134555554 8999999
Q ss_pred cCCcccHHHHHHHHHc--CCeEEEecCCCCCHHHHHHHHH
Q 018445 81 LAGQAQVDTSLKLLKA--GKHVIQEKPAAANISEIENALS 118 (355)
Q Consensus 81 tp~~~H~~~~~~al~~--GkhVl~EKP~a~~~~e~~~l~~ 118 (355)
+|+..-.+++.+.... ...|++.- -+......+++.+
T Consensus 73 vp~~~~~~vl~~l~~~l~~~~iv~~~-~svk~~~~~~~~~ 111 (298)
T 2pv7_A 73 VPINLTLETIERLKPYLTENMLLADL-TSVKREPLAKMLE 111 (298)
T ss_dssp SCGGGHHHHHHHHGGGCCTTSEEEEC-CSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhcCCCcEEEEC-CCCCcHHHHHHHH
Confidence 9999877776654332 12355553 2333334444433
No 279
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=96.03 E-value=0.0081 Score=56.28 Aligned_cols=80 Identities=19% Similarity=0.186 Sum_probs=49.1
Q ss_pred CceEEEEecccccch-hccchhhh---cCCeEEEEEEEeCCHHHHHHHHHHHhhhcCC---ccccccCcchhhhhcCCCc
Q 018445 2 APRIAILGAGIFVKT-QYIPRLAE---ISDLVSLKFIWSRSEESAKSAAEVARKHFAD---VECVWGDNGLEQIIKEDSI 74 (355)
Q Consensus 2 ~~rigiiG~G~~~~~-~~~~~l~~---~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ell~~~~~ 74 (355)
.+||+|||+|.+|.. ..+..|.. .+. .+| .++|+++++++..........+. ......++|+++.+++ .
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~-~eV-~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~d--A 78 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSG-STV-TLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIID--A 78 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTT-CEE-EEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTT--C
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCC-CEE-EEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCC--C
Confidence 479999999996422 12334432 222 344 78899999988765543332111 1111123688887876 8
Q ss_pred cEEEEecCCcc
Q 018445 75 LGVAVVLAGQA 85 (355)
Q Consensus 75 D~V~I~tp~~~ 85 (355)
|+|+++.|...
T Consensus 79 D~VIiaagv~~ 89 (480)
T 1obb_A 79 DFVINTAMVGG 89 (480)
T ss_dssp SEEEECCCTTH
T ss_pred CEEEECCCccc
Confidence 99999998643
No 280
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=96.03 E-value=0.0044 Score=55.48 Aligned_cols=64 Identities=9% Similarity=0.148 Sum_probs=46.8
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||+. ....+...+ .+|+ ++|++++.... + . ++. + .+++|++++ .|+|++++|
T Consensus 142 ~tvgIiG~G~IG~~-vA~~l~~~G--~~V~-~~d~~~~~~~~--~----~--g~~--~--~~l~ell~~--aDvV~l~~P 203 (334)
T 2pi1_A 142 LTLGVIGTGRIGSR-VAMYGLAFG--MKVL-CYDVVKREDLK--E----K--GCV--Y--TSLDELLKE--SDVISLHVP 203 (334)
T ss_dssp SEEEEECCSHHHHH-HHHHHHHTT--CEEE-EECSSCCHHHH--H----T--TCE--E--CCHHHHHHH--CSEEEECCC
T ss_pred ceEEEECcCHHHHH-HHHHHHHCc--CEEE-EECCCcchhhH--h----c--Cce--e--cCHHHHHhh--CCEEEEeCC
Confidence 48999999999986 777777765 6774 56887765422 1 1 332 2 569999987 899999999
Q ss_pred Cc
Q 018445 83 GQ 84 (355)
Q Consensus 83 ~~ 84 (355)
..
T Consensus 204 ~t 205 (334)
T 2pi1_A 204 YT 205 (334)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 281
>2bh9_A G6PD, glucose-6-phosphate 1-dehydrogenase; oxidoreductase, oxidoreductase (CHOH(D)-NADP), carbohydrate metabolism, glucose metabolism; HET: NAP; 2.5A {Homo sapiens} PDB: 2bhl_A* 1qki_A*
Probab=96.02 E-value=0.036 Score=51.38 Aligned_cols=191 Identities=11% Similarity=0.134 Sum_probs=105.5
Q ss_pred eEEEEe-cccccchhccchhhh------cCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCc------------ccccc---
Q 018445 4 RIAILG-AGIFVKTQYIPRLAE------ISDLVSLKFIWSRSEESAKSAAEVARKHFADV------------ECVWG--- 61 (355)
Q Consensus 4 rigiiG-~G~~~~~~~~~~l~~------~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~------------~~~~~--- 61 (355)
-+.|.| +|.-+++..+|+|-. ++.++.|+|+.-..- ..+.+.+..+...... ...|.
T Consensus 7 ~~VIFGatGDLA~RKL~PaLy~L~~~g~Lp~~~~iiG~aR~~~-~~~~~r~~~~~~l~~~~~~~~~~~~F~~~~~Y~~~d 85 (489)
T 2bh9_A 7 IFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRL-TVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAGQ 85 (489)
T ss_dssp EEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEESSCC-CHHHHHHHHGGGSCCCGGGHHHHHHHHHTEEEEECC
T ss_pred EEEEeCCcHHHHHHhHHHHHHHHHHcCCCCCCcEEEEEeCCCC-CHHHHHHHHHHHHhcccCCHHHHHHHHhcCEEEecC
Confidence 456777 455666667788764 566689999875432 2233333222221000 00010
Q ss_pred C---cchhhh---hcC-----CCccEEEEecCCcccHHHHHHHHHcCC------eEEEecCCCCCHHHHHHHHHHhhccC
Q 018445 62 D---NGLEQI---IKE-----DSILGVAVVLAGQAQVDTSLKLLKAGK------HVIQEKPAAANISEIENALSRYNSIC 124 (355)
Q Consensus 62 ~---~~~~el---l~~-----~~~D~V~I~tp~~~H~~~~~~al~~Gk------hVl~EKP~a~~~~e~~~l~~~a~~~~ 124 (355)
+ ++|+.| ++. ..--+.+.++||..-..++...-++|. -|.+|||++.|++.|++|.+...+.
T Consensus 86 ~~~~~~~~~L~~~l~~~~~~~~~nr~fYLA~pP~~f~~i~~~L~~~gl~~~g~~RvViEKPFG~DL~SA~~Ln~~l~~~- 164 (489)
T 2bh9_A 86 YDDAASYQRLNSHMNALHLGSQANRLFYLALPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDLQSSDRLSNHISSL- 164 (489)
T ss_dssp SSCHHHHHHHHHHHHTTTTTTTSEEEEEECSCTTSHHHHHHHHHHHSCCSSSCEEEEECSCSCSSHHHHHHHHHHHTTT-
T ss_pred CCCHHHHHHHHHHHHHhhccCCCceEEEEeCCHHHHHHHHHHHHHhCCCcCCceEEEEeCCCCCchhhHHHHHHHHHhh-
Confidence 0 233333 321 123488999999988888877766654 6999999999999999999988775
Q ss_pred CCCCCCCeEEEEecccCchHH--HHHHHHHH----H--h------CCeeEEEEEEeeccCCCCCccCccccccccCcccc
Q 018445 125 PDPPGQPIWAVAENYRFEPAF--VECKKLIA----E--I------GDMMSVQVIVEGSMNSSNPYFSSSWRRNFTGGFIL 190 (355)
Q Consensus 125 ~~~~~~~~~~v~~~~r~~p~~--~~~k~~i~----~--i------G~i~~v~~~~~~~~~~~~~~~~~~w~~~~~gg~l~ 190 (355)
+--...+|-+-.. ..+++++. . + --|-+|.+++.....- ..++..-...|++-
T Consensus 165 --------F~E~qIyRIDHYLGKE~VQNll~lRFaN~ifeplWNr~~Id~VqIt~aE~~Gv-----egRggYYD~~GalR 231 (489)
T 2bh9_A 165 --------FREDQIYRIDHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEPFGT-----EGRGGYFDEFGIIR 231 (489)
T ss_dssp --------SCGGGEEECCGGGGCHHHHHHHHHHHSCGGGSTTCSTTTEEEEEEEEECSCCC-----TTCHHHHTTTHHHH
T ss_pred --------CCHHHeeecccccchHHHHHHHHHHHhhHHHHhhhcccccceEEEEEecCCCc-----cchhhhhhccchHH
Confidence 2233333433222 22333322 0 1 2455666665432211 01111113568888
Q ss_pred chhh-HHHHHHHHHhCCcce
Q 018445 191 DMGV-HFIAGLRMITGCEVV 209 (355)
Q Consensus 191 d~g~-H~id~~~~l~G~~~~ 209 (355)
|+.- |.+-++..+.=++|.
T Consensus 232 DmvQNHLlQlL~lvAMEpP~ 251 (489)
T 2bh9_A 232 DVMQNHLLQMLCLVAMEKPA 251 (489)
T ss_dssp HTTTTHHHHHHHHHHCCCCS
T ss_pred HHHHHHHHHHHHHHHhCCCC
Confidence 8865 777766666533443
No 282
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=96.02 E-value=0.014 Score=52.01 Aligned_cols=74 Identities=11% Similarity=0.048 Sum_probs=46.7
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcC---CccccccCcchhhhhcCCCccEEEE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFA---DVECVWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ell~~~~~D~V~I 79 (355)
+||+|||+|.+|.. .+..|...+- +.-+.++|+++++++..+.......+ .+... .+++++ +++ .|+|+|
T Consensus 10 ~kV~ViGaG~vG~~-~a~~l~~~~~-~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~--~~~~~a-~~~--aDiVvi 82 (326)
T 3vku_A 10 QKVILVGDGAVGSS-YAYAMVLQGI-AQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIY--SAEYSD-AKD--ADLVVI 82 (326)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHTC-CSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE--ECCGGG-GTT--CSEEEE
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCC-CCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEE--ECcHHH-hcC--CCEEEE
Confidence 69999999999975 6666665443 33447789999988865543322211 22211 134544 444 799999
Q ss_pred ecCC
Q 018445 80 VLAG 83 (355)
Q Consensus 80 ~tp~ 83 (355)
+...
T Consensus 83 ~ag~ 86 (326)
T 3vku_A 83 TAGA 86 (326)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8654
No 283
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=96.01 E-value=0.015 Score=54.09 Aligned_cols=76 Identities=12% Similarity=0.094 Sum_probs=49.1
Q ss_pred ceEEEEeccccc--chhccchhhhcC--CeEEEEEEEeCCHHHHHHHHHHHhhhc-CCccccccCcchhhhhcCCCccEE
Q 018445 3 PRIAILGAGIFV--KTQYIPRLAEIS--DLVSLKFIWSRSEESAKSAAEVARKHF-ADVECVWGDNGLEQIIKEDSILGV 77 (355)
Q Consensus 3 ~rigiiG~G~~~--~~~~~~~l~~~~--~~~~vvai~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ell~~~~~D~V 77 (355)
+||+|||+|++| .. .+..|...+ .+ +| .++|+++++++......+... ...... .++|+++.+++ .|.|
T Consensus 6 ~KIaVIGaGs~g~g~~-la~~l~~~~~~~g-eV-~L~Di~~e~le~~~~~~~~l~~~~~~I~-~TtD~~eAl~d--ADfV 79 (450)
T 3fef_A 6 IKIAYIGGGSQGWARS-LMSDLSIDERMSG-TV-ALYDLDFEAAQKNEVIGNHSGNGRWRYE-AVSTLKKALSA--ADIV 79 (450)
T ss_dssp EEEEEETTTCSSHHHH-HHHHHHHCSSCCE-EE-EEECSSHHHHHHHHHHHTTSTTSCEEEE-EESSHHHHHTT--CSEE
T ss_pred CEEEEECCChhHhHHH-HHHHHHhccccCC-eE-EEEeCCHHHHHHHHHHHHHHhccCCeEE-EECCHHHHhcC--CCEE
Confidence 699999999974 33 444554322 23 54 788999998876644322110 111111 24799999987 8999
Q ss_pred EEecCCc
Q 018445 78 AVVLAGQ 84 (355)
Q Consensus 78 ~I~tp~~ 84 (355)
+++.+..
T Consensus 80 I~airvG 86 (450)
T 3fef_A 80 IISILPG 86 (450)
T ss_dssp EECCCSS
T ss_pred EeccccC
Confidence 9999864
No 284
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=95.98 E-value=0.0079 Score=52.15 Aligned_cols=73 Identities=18% Similarity=0.117 Sum_probs=52.0
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecCC
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLAG 83 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp~ 83 (355)
++.|+|+|.+|+. .+..|.+.+ +.-+.|++|++++++.+++.... ..+.. .+++++-. .+.|+|+.+||.
T Consensus 122 ~~lvlGaGg~~~a-ia~~L~~~G--~~~v~i~~R~~~~a~~la~~~~~--~~~~~----~~~~~l~~-~~~DivInaTp~ 191 (272)
T 3pwz_A 122 RVLLLGAGGAVRG-ALLPFLQAG--PSELVIANRDMAKALALRNELDH--SRLRI----SRYEALEG-QSFDIVVNATSA 191 (272)
T ss_dssp EEEEECCSHHHHH-HHHHHHHTC--CSEEEEECSCHHHHHHHHHHHCC--TTEEE----ECSGGGTT-CCCSEEEECSSG
T ss_pred EEEEECccHHHHH-HHHHHHHcC--CCEEEEEeCCHHHHHHHHHHhcc--CCeeE----eeHHHhcc-cCCCEEEECCCC
Confidence 7899999999975 677777754 43347889999999998874322 11221 34555543 569999999998
Q ss_pred ccc
Q 018445 84 QAQ 86 (355)
Q Consensus 84 ~~H 86 (355)
..+
T Consensus 192 gm~ 194 (272)
T 3pwz_A 192 SLT 194 (272)
T ss_dssp GGG
T ss_pred CCC
Confidence 875
No 285
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=95.96 E-value=0.0029 Score=55.40 Aligned_cols=62 Identities=11% Similarity=0.116 Sum_probs=46.2
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||.. ....+...+ .+|++ +|++++..+. .. . .+++++++++ .|+|++++|
T Consensus 123 ~tvGIIGlG~IG~~-vA~~l~~~G--~~V~~-~dr~~~~~~~-----------~~-~--~~~l~ell~~--aDiV~l~~P 182 (290)
T 3gvx_A 123 KALGILGYGGIGRR-VAHLAKAFG--MRVIA-YTRSSVDQNV-----------DV-I--SESPADLFRQ--SDFVLIAIP 182 (290)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHT--CEEEE-ECSSCCCTTC-----------SE-E--CSSHHHHHHH--CSEEEECCC
T ss_pred chheeeccCchhHH-HHHHHHhhC--cEEEE-Eecccccccc-----------cc-c--cCChHHHhhc--cCeEEEEee
Confidence 48999999999986 777777765 67754 5887654321 11 1 1689999987 899999999
Q ss_pred Cc
Q 018445 83 GQ 84 (355)
Q Consensus 83 ~~ 84 (355)
..
T Consensus 183 ~t 184 (290)
T 3gvx_A 183 LT 184 (290)
T ss_dssp CC
T ss_pred cc
Confidence 64
No 286
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=95.96 E-value=0.015 Score=51.63 Aligned_cols=77 Identities=13% Similarity=0.107 Sum_probs=46.6
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcC----CccccccCcchhhhhcCCCccEE
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFA----DVECVWGDNGLEQIIKEDSILGV 77 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ell~~~~~D~V 77 (355)
++||+|||+|.+|.. .+..|...+- +.-+.++|+++++++..+.......+ .+... .+++ +.+++ .|+|
T Consensus 6 ~~KI~IIGaG~vG~~-la~~l~~~~~-~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~--~~~~-~a~~~--aDvV 78 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSS-YAFSLVNQSI-VDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK--AGEY-SDCHD--ADLV 78 (317)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHHCS-CSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE--ECCG-GGGTT--CSEE
T ss_pred CCEEEEECCCHHHHH-HHHHHHhCCC-CCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE--eCCH-HHhCC--CCEE
Confidence 579999999999975 5555554432 34557889999887753332211111 11111 1333 34554 8999
Q ss_pred EEecCCcc
Q 018445 78 AVVLAGQA 85 (355)
Q Consensus 78 ~I~tp~~~ 85 (355)
+++.+...
T Consensus 79 vi~ag~~~ 86 (317)
T 3d0o_A 79 VICAGAAQ 86 (317)
T ss_dssp EECCCCCC
T ss_pred EECCCCCC
Confidence 99987653
No 287
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=95.94 E-value=0.018 Score=51.13 Aligned_cols=77 Identities=18% Similarity=0.141 Sum_probs=46.4
Q ss_pred CC-ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhc----CCccccccCcchhhhhcCCCcc
Q 018445 1 MA-PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHF----ADVECVWGDNGLEQIIKEDSIL 75 (355)
Q Consensus 1 m~-~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ell~~~~~D 75 (355)
|+ +||+|||+|.+|.. ....|...+- .+ +.++|+++++++..+....... ...... .++++ +.+++ .|
T Consensus 5 m~~~kI~viGaG~vG~~-~a~~l~~~~~-~~-v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~t~d~-~a~~~--aD 77 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGT-LAHLAGLKEL-GD-VVLFDIAEGTPQGKGLDIAESSPVDGFDAKFT-GANDY-AAIEG--AD 77 (324)
T ss_dssp -CCCEEEEECCSHHHHH-HHHHHHHTTC-CE-EEEECSSSSHHHHHHHHHHHHHHHHTCCCCEE-EESSG-GGGTT--CS
T ss_pred CcCCEEEEECCCHHHHH-HHHHHHhCCC-Ce-EEEEeCCchhHHHHHHHHhchhhhcCCCCEEE-EeCCH-HHHCC--CC
Confidence 44 49999999999975 5666655443 25 4788999988764333222211 011111 12677 55555 89
Q ss_pred EEEEecCCc
Q 018445 76 GVAVVLAGQ 84 (355)
Q Consensus 76 ~V~I~tp~~ 84 (355)
+|+|+.+..
T Consensus 78 iVIiaag~p 86 (324)
T 3gvi_A 78 VVIVTAGVP 86 (324)
T ss_dssp EEEECCSCC
T ss_pred EEEEccCcC
Confidence 999996543
No 288
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=95.92 E-value=0.0039 Score=55.86 Aligned_cols=62 Identities=24% Similarity=0.331 Sum_probs=44.1
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||.. ....+...+ .+| .++|+++++. . +.. . +.+++|++++ .|+|++++|
T Consensus 172 ktiGIIGlG~IG~~-vA~~l~~~G--~~V-~~~dr~~~~~---------~--~~~-~--~~sl~ell~~--aDvVil~vP 231 (340)
T 4dgs_A 172 KRIGVLGLGQIGRA-LASRAEAFG--MSV-RYWNRSTLSG---------V--DWI-A--HQSPVDLARD--SDVLAVCVA 231 (340)
T ss_dssp CEEEEECCSHHHHH-HHHHHHTTT--CEE-EEECSSCCTT---------S--CCE-E--CSSHHHHHHT--CSEEEECC-
T ss_pred CEEEEECCCHHHHH-HHHHHHHCC--CEE-EEEcCCcccc---------c--Cce-e--cCCHHHHHhc--CCEEEEeCC
Confidence 58999999999986 777777654 676 4678887541 1 221 1 2789999997 899999999
Q ss_pred Cc
Q 018445 83 GQ 84 (355)
Q Consensus 83 ~~ 84 (355)
..
T Consensus 232 ~t 233 (340)
T 4dgs_A 232 AS 233 (340)
T ss_dssp --
T ss_pred CC
Confidence 53
No 289
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=95.87 E-value=0.00074 Score=59.52 Aligned_cols=82 Identities=11% Similarity=0.004 Sum_probs=47.4
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEe
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
|.|||+|||+|.||.. +...|.+.+. +| .+++++++..+... ... ..+... ..+..+.+. .+.|+|+++
T Consensus 1 M~mkI~iiGaGa~G~~-~a~~L~~~g~--~V-~~~~r~~~~~~~~~----~~g-~~~~~~-~~~~~~~~~-~~~D~vila 69 (294)
T 3g17_A 1 MSLSVAIIGPGAVGTT-IAYELQQSLP--HT-TLIGRHAKTITYYT----VPH-APAQDI-VVKGYEDVT-NTFDVIIIA 69 (294)
T ss_dssp --CCEEEECCSHHHHH-HHHHHHHHCT--TC-EEEESSCEEEEEES----STT-SCCEEE-EEEEGGGCC-SCEEEEEEC
T ss_pred CCcEEEEECCCHHHHH-HHHHHHHCCC--eE-EEEEeccCcEEEEe----cCC-eeccce-ecCchHhcC-CCCCEEEEe
Confidence 8899999999999984 7777776553 44 35577765433110 111 011011 023333331 358999999
Q ss_pred cCCcccHHHHHHH
Q 018445 81 LAGQAQVDTSLKL 93 (355)
Q Consensus 81 tp~~~H~~~~~~a 93 (355)
+|+....+++...
T Consensus 70 vk~~~~~~~l~~l 82 (294)
T 3g17_A 70 VKTHQLDAVIPHL 82 (294)
T ss_dssp SCGGGHHHHGGGH
T ss_pred CCccCHHHHHHHH
Confidence 9999766665543
No 290
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=95.87 E-value=0.0054 Score=55.02 Aligned_cols=88 Identities=20% Similarity=0.259 Sum_probs=59.4
Q ss_pred ceEEEEe-cccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCcc--ccccCcchhhhhcCCCccEEEE
Q 018445 3 PRIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVE--CVWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 3 ~rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ell~~~~~D~V~I 79 (355)
+|||||| +|..|.. .++.|.++|. ++|+.+.+.+. ..+.+.+ .+|... ..+...+.++++++ +|+|+.
T Consensus 14 ~~V~IvGAtG~vG~e-llrlL~~hP~-~el~~l~S~~~-aG~~~~~----~~p~~~~~l~~~~~~~~~~~~~--~Dvvf~ 84 (351)
T 1vkn_A 14 IRAGIIGATGYTGLE-LVRLLKNHPE-AKITYLSSRTY-AGKKLEE----IFPSTLENSILSEFDPEKVSKN--CDVLFT 84 (351)
T ss_dssp EEEEEESTTSHHHHH-HHHHHHHCTT-EEEEEEECSTT-TTSBHHH----HCGGGCCCCBCBCCCHHHHHHH--CSEEEE
T ss_pred eEEEEECCCCHHHHH-HHHHHHcCCC-cEEEEEeCccc-ccCChHH----hChhhccCceEEeCCHHHhhcC--CCEEEE
Confidence 5999998 5777876 8999999987 99999987543 2233332 122221 11101245555443 999999
Q ss_pred ecCCcccHHHHHHHHHcCCeEE
Q 018445 80 VLAGQAQVDTSLKLLKAGKHVI 101 (355)
Q Consensus 80 ~tp~~~H~~~~~~al~~GkhVl 101 (355)
|+|+..-.+++.++ +|.-|+
T Consensus 85 alp~~~s~~~~~~~--~g~~VI 104 (351)
T 1vkn_A 85 ALPAGASYDLVREL--KGVKII 104 (351)
T ss_dssp CCSTTHHHHHHTTC--CSCEEE
T ss_pred CCCcHHHHHHHHHh--CCCEEE
Confidence 99999999998887 776544
No 291
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=95.86 E-value=0.0035 Score=56.08 Aligned_cols=63 Identities=14% Similarity=0.198 Sum_probs=46.5
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||.. ....+...+ .+| .++|++++..+ +.. .+ .++++++++ .|+|++++|
T Consensus 165 ~~vgIIG~G~iG~~-vA~~l~~~G--~~V-~~~dr~~~~~~-----------g~~-~~--~~l~ell~~--aDvVil~vP 224 (333)
T 3ba1_A 165 KRVGIIGLGRIGLA-VAERAEAFD--CPI-SYFSRSKKPNT-----------NYT-YY--GSVVELASN--SDILVVACP 224 (333)
T ss_dssp CCEEEECCSHHHHH-HHHHHHTTT--CCE-EEECSSCCTTC-----------CSE-EE--SCHHHHHHT--CSEEEECSC
T ss_pred CEEEEECCCHHHHH-HHHHHHHCC--CEE-EEECCCchhcc-----------Cce-ec--CCHHHHHhc--CCEEEEecC
Confidence 48999999999986 777777654 565 45788876421 222 12 789999987 899999999
Q ss_pred Ccc
Q 018445 83 GQA 85 (355)
Q Consensus 83 ~~~ 85 (355)
...
T Consensus 225 ~~~ 227 (333)
T 3ba1_A 225 LTP 227 (333)
T ss_dssp CCG
T ss_pred CCh
Confidence 853
No 292
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=95.86 E-value=0.018 Score=51.34 Aligned_cols=79 Identities=16% Similarity=0.143 Sum_probs=45.1
Q ss_pred CCceEEEEe-cccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcC-CccccccCcchhhhhcCCCccEEE
Q 018445 1 MAPRIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFA-DVECVWGDNGLEQIIKEDSILGVA 78 (355)
Q Consensus 1 m~~rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ell~~~~~D~V~ 78 (355)
++|||+||| +|.+|.. .+..|...+...+| .++|++++..+ ..+......+ .+....+++++++.+++ .|+|+
T Consensus 7 ~~mKI~ViGAaG~VG~~-la~~L~~~g~~~ev-~l~Di~~~~~~-~~dL~~~~~~~~v~~~~~t~d~~~al~g--aDvVi 81 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQP-LAMLMKMNPLVSVL-HLYDVVNAPGV-TADISHMDTGAVVRGFLGQQQLEAALTG--MDLII 81 (326)
T ss_dssp -CEEEEEETTTSTTHHH-HHHHHHHCTTEEEE-EEEESSSHHHH-HHHHHTSCSSCEEEEEESHHHHHHHHTT--CSEEE
T ss_pred CCCEEEEECCCChHHHH-HHHHHHhCCCCCEE-EEEeCCCcHhH-HHHhhcccccceEEEEeCCCCHHHHcCC--CCEEE
Confidence 468999999 8999985 56666654431345 44798876222 1111111111 11110012477888876 89999
Q ss_pred EecCCc
Q 018445 79 VVLAGQ 84 (355)
Q Consensus 79 I~tp~~ 84 (355)
++.+..
T Consensus 82 ~~ag~~ 87 (326)
T 1smk_A 82 VPAGVP 87 (326)
T ss_dssp ECCCCC
T ss_pred EcCCcC
Confidence 997543
No 293
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=95.83 E-value=0.018 Score=51.98 Aligned_cols=94 Identities=12% Similarity=0.020 Sum_probs=63.2
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCH-------------------HHHHHHHHHHhhhcCCccccccC-
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSE-------------------ESAKSAAEVARKHFADVECVWGD- 62 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~- 62 (355)
-||.|||+|..|.. .+..|.+.+ +.=+.++|.+. .+++.+++...+..|.+......
T Consensus 119 ~~VlvvG~GglGs~-va~~La~aG--vg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~ 195 (353)
T 3h5n_A 119 AKVVILGCGGIGNH-VSVILATSG--IGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIAL 195 (353)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHT--CSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred CeEEEECCCHHHHH-HHHHHHhCC--CCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeec
Confidence 48999999999975 778887765 33346667753 46777777776777776432211
Q ss_pred ----cc-hhhhhcCCCccEEEEecCCcc--cHHHHHHHHHcCCeEEE
Q 018445 63 ----NG-LEQIIKEDSILGVAVVLAGQA--QVDTSLKLLKAGKHVIQ 102 (355)
Q Consensus 63 ----~~-~~ell~~~~~D~V~I~tp~~~--H~~~~~~al~~GkhVl~ 102 (355)
.+ +++ ++ +.|+|+.++.+.. ++.+...|.+.|++++.
T Consensus 196 ~i~~~~~~~~-~~--~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p~i~ 239 (353)
T 3h5n_A 196 NINDYTDLHK-VP--EADIWVVSADHPFNLINWVNKYCVRANQPYIN 239 (353)
T ss_dssp CCCSGGGGGG-SC--CCSEEEECCCCSTTHHHHHHHHHHHTTCCEEE
T ss_pred ccCchhhhhH-hc--cCCEEEEecCChHHHHHHHHHHHHHhCCCEEE
Confidence 11 444 44 4899999987654 55566788888887653
No 294
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=95.82 E-value=0.00095 Score=58.11 Aligned_cols=119 Identities=15% Similarity=0.033 Sum_probs=68.4
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecCC
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLAG 83 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp~ 83 (355)
++.|||+|.+|+. .+..|.+.+ +.-+.|++|++++++.+++ .+... .++++++++.+ .|+|+.+||.
T Consensus 119 ~vlvlGaGg~g~a-ia~~L~~~G--~~~v~v~~R~~~~a~~la~-------~~~~~-~~~~~~~~~~~--aDiVInaTp~ 185 (277)
T 3don_A 119 YILILGAGGASKG-IANELYKIV--RPTLTVANRTMSRFNNWSL-------NINKI-NLSHAESHLDE--FDIIINTTPA 185 (277)
T ss_dssp CEEEECCSHHHHH-HHHHHHTTC--CSCCEEECSCGGGGTTCCS-------CCEEE-CHHHHHHTGGG--CSEEEECCC-
T ss_pred EEEEECCcHHHHH-HHHHHHHCC--CCEEEEEeCCHHHHHHHHH-------hcccc-cHhhHHHHhcC--CCEEEECccC
Confidence 7999999999975 677777654 4334678999999877653 22111 11456666654 8999999998
Q ss_pred cccHHH----HHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHH
Q 018445 84 QAQVDT----SLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAF 145 (355)
Q Consensus 84 ~~H~~~----~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~ 145 (355)
..+... -...++.+ .++++= ..++.+. .+++.|++ .|..+.-|..+-...+.
T Consensus 186 Gm~~~~~~~l~~~~l~~~-~~V~D~--vY~P~~T-~ll~~A~~------~G~~~~~Gl~MLv~Qa~ 241 (277)
T 3don_A 186 GMNGNTDSVISLNRLASH-TLVSDI--VYNPYKT-PILIEAEQ------RGNPIYNGLDMFVHQGA 241 (277)
T ss_dssp ------CCSSCCTTCCSS-CEEEES--CCSSSSC-HHHHHHHH------TTCCEECTHHHHHHHHH
T ss_pred CCCCCCcCCCCHHHcCCC-CEEEEe--cCCCCCC-HHHHHHHH------CcCEEeCCHHHHHHHHH
Confidence 754332 11222223 344551 1122222 46777777 47777776665544443
No 295
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=95.82 E-value=0.0099 Score=52.86 Aligned_cols=76 Identities=8% Similarity=-0.032 Sum_probs=48.2
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh--cCCccccccCcchhhhhcCCCccEEEEe
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH--FADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
+||+|||+|.+|.. ....+...+- +.-+.++|+++++++..+...... ++.......++||++ +++ .|+|+|+
T Consensus 22 ~kV~ViGaG~vG~~-~a~~la~~g~-~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~d--aDiVIit 96 (330)
T 3ldh_A 22 NKITVVGCDAVGMA-DAISVLMKDL-ADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAG--SKLVVIT 96 (330)
T ss_dssp CEEEEESTTHHHHH-HHHHHHHHCC-CSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSS--CSEEEEC
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCC-CCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCC--CCEEEEe
Confidence 69999999999975 5666655442 334577899999887754422221 222222222368887 655 8999998
Q ss_pred cCC
Q 018445 81 LAG 83 (355)
Q Consensus 81 tp~ 83 (355)
...
T Consensus 97 aG~ 99 (330)
T 3ldh_A 97 AGA 99 (330)
T ss_dssp CSC
T ss_pred CCC
Confidence 544
No 296
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=95.79 E-value=0.0071 Score=54.20 Aligned_cols=98 Identities=17% Similarity=0.163 Sum_probs=54.8
Q ss_pred CC-ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh-cCCccc---cccCcchhhhhcCCCcc
Q 018445 1 MA-PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH-FADVEC---VWGDNGLEQIIKEDSIL 75 (355)
Q Consensus 1 m~-~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~ell~~~~~D 75 (355)
|. |||+|||+|.||.. +...|.+.+ .+| .+++++ ++.+.+.+..... .++... ...+++++++ .+.|
T Consensus 1 M~~mkI~IiGaG~~G~~-~a~~L~~~g--~~V-~~~~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~D 72 (335)
T 3ghy_A 1 MSLTRICIVGAGAVGGY-LGARLALAG--EAI-NVLARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAAAL---GEQD 72 (335)
T ss_dssp -CCCCEEEESCCHHHHH-HHHHHHHTT--CCE-EEECCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHHHH---CCCS
T ss_pred CCCCEEEEECcCHHHHH-HHHHHHHCC--CEE-EEEECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHHHc---CCCC
Confidence 54 69999999999985 777777654 354 355674 5555554311000 011000 0001567764 3489
Q ss_pred EEEEecCCcccHHHHHHHH---HcCCe-EEEecCC
Q 018445 76 GVAVVLAGQAQVDTSLKLL---KAGKH-VIQEKPA 106 (355)
Q Consensus 76 ~V~I~tp~~~H~~~~~~al---~~Gkh-Vl~EKP~ 106 (355)
+|++++|+....+++.... ..+.. |.+-|.+
T Consensus 73 ~Vilavk~~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 73 VVIVAVKAPALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp EEEECCCHHHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred EEEEeCCchhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 9999999975554443321 12333 4457775
No 297
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=95.79 E-value=0.0083 Score=57.29 Aligned_cols=65 Identities=15% Similarity=0.217 Sum_probs=46.2
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||.. ....+...+ .+|+ ++|+++.. +.+.+ . ++. + .++++++++ .|+|++++|
T Consensus 143 ~~vgIIG~G~IG~~-vA~~l~~~G--~~V~-~~d~~~~~-~~a~~----~--g~~--~--~~l~e~~~~--aDvV~l~~P 205 (529)
T 1ygy_A 143 KTVGVVGLGRIGQL-VAQRIAAFG--AYVV-AYDPYVSP-ARAAQ----L--GIE--L--LSLDDLLAR--ADFISVHLP 205 (529)
T ss_dssp CEEEEECCSHHHHH-HHHHHHTTT--CEEE-EECTTSCH-HHHHH----H--TCE--E--CCHHHHHHH--CSEEEECCC
T ss_pred CEEEEEeeCHHHHH-HHHHHHhCC--CEEE-EECCCCCh-hHHHh----c--CcE--E--cCHHHHHhc--CCEEEECCC
Confidence 58999999999986 777777654 6765 46887643 22222 2 332 1 478898886 799999999
Q ss_pred Cc
Q 018445 83 GQ 84 (355)
Q Consensus 83 ~~ 84 (355)
..
T Consensus 206 ~~ 207 (529)
T 1ygy_A 206 KT 207 (529)
T ss_dssp CS
T ss_pred Cc
Confidence 86
No 298
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=95.77 E-value=0.0068 Score=55.07 Aligned_cols=64 Identities=13% Similarity=0.168 Sum_probs=46.4
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||.. ....+...+ ++|+ +||++++.. .. +. .+ .++++++++ .|+|++++|
T Consensus 117 ~tvGIIGlG~IG~~-vA~~l~~~G--~~V~-~~d~~~~~~--------~~--g~--~~--~~l~ell~~--aDvV~l~~P 176 (380)
T 2o4c_A 117 RTYGVVGAGQVGGR-LVEVLRGLG--WKVL-VCDPPRQAR--------EP--DG--EF--VSLERLLAE--ADVISLHTP 176 (380)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CEEE-EECHHHHHH--------ST--TS--CC--CCHHHHHHH--CSEEEECCC
T ss_pred CEEEEEeCCHHHHH-HHHHHHHCC--CEEE-EEcCChhhh--------cc--Cc--cc--CCHHHHHHh--CCEEEEecc
Confidence 48999999999986 777777765 6775 467654321 11 22 22 789999986 899999999
Q ss_pred Cccc
Q 018445 83 GQAQ 86 (355)
Q Consensus 83 ~~~H 86 (355)
....
T Consensus 177 lt~~ 180 (380)
T 2o4c_A 177 LNRD 180 (380)
T ss_dssp CCSS
T ss_pred Cccc
Confidence 7653
No 299
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=95.74 E-value=0.016 Score=51.59 Aligned_cols=75 Identities=9% Similarity=0.017 Sum_probs=46.9
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh--cCCccccccCcchhhhhcCCCccEEEEe
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH--FADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
+||+|||+|.+|.. ....+...+- +.-+.++|+++++++..+...... ++........++|++ +++ .|+|+|+
T Consensus 20 ~kV~ViGaG~vG~~-~a~~l~~~~~-~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~~-~~~--aDiVvi~ 94 (331)
T 4aj2_A 20 NKITVVGVGAVGMA-CAISILMKDL-ADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYSV-TAN--SKLVIIT 94 (331)
T ss_dssp SEEEEECCSHHHHH-HHHHHHHTTC-CSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGGG-GTT--EEEEEEC
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCC-CceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHHH-hCC--CCEEEEc
Confidence 69999999999975 4545544332 333578899998888755433221 222222222367875 554 8999998
Q ss_pred cC
Q 018445 81 LA 82 (355)
Q Consensus 81 tp 82 (355)
..
T Consensus 95 aG 96 (331)
T 4aj2_A 95 AG 96 (331)
T ss_dssp CS
T ss_pred cC
Confidence 53
No 300
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=95.74 E-value=0.0031 Score=57.45 Aligned_cols=102 Identities=14% Similarity=0.119 Sum_probs=62.5
Q ss_pred CceEEEEecccccchhccchhhhcCCe-----EEEEEEEeCCHHH-----HHHHHH--HHhhhcCCccc---cccCcchh
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDL-----VSLKFIWSRSEES-----AKSAAE--VARKHFADVEC---VWGDNGLE 66 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~-----~~vvai~d~~~~~-----~~~~~~--~~~~~~~~~~~---~~~~~~~~ 66 (355)
|+||+|||+|.||.. ....|.++..+ -.-|-+|.++++. .+.+.. .+.+|.|++.- ...++|++
T Consensus 34 p~KI~ViGaGsWGTA-LA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~ 112 (391)
T 4fgw_A 34 PFKVTVIGSGNWGTT-IAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLI 112 (391)
T ss_dssp CEEEEEECCSHHHHH-HHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHH
T ss_pred CCeEEEECcCHHHHH-HHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHH
Confidence 579999999999984 56666544221 1235777777653 222221 11234454321 01137899
Q ss_pred hhhcCCCccEEEEecCCcccHHHHHHHHH---cCCe-EEEecCC
Q 018445 67 QIIKEDSILGVAVVLAGQAQVDTSLKLLK---AGKH-VIQEKPA 106 (355)
Q Consensus 67 ell~~~~~D~V~I~tp~~~H~~~~~~al~---~Gkh-Vl~EKP~ 106 (355)
+.+++ .|+|++++|...-.+++.+... .++. |.|-|=+
T Consensus 113 ~al~~--ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 113 DSVKD--VDIIVFNIPHQFLPRICSQLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp HHHTT--CSEEEECSCGGGHHHHHHHHTTTSCTTCEEEECCCSC
T ss_pred HHHhc--CCEEEEECChhhhHHHHHHhccccCCCceeEEecccc
Confidence 99987 7999999999888777776532 2333 4455654
No 301
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=95.72 E-value=0.021 Score=50.68 Aligned_cols=77 Identities=13% Similarity=0.088 Sum_probs=46.6
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhc---CCccccccCcchhhhhcCCCccEEE
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHF---ADVECVWGDNGLEQIIKEDSILGVA 78 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ell~~~~~D~V~ 78 (355)
.+||+|||+|.+|.. .+..|...+- +.-+.++|+++++++..+....... ..+... .+++++ +++ .|+|+
T Consensus 5 ~~KI~IiGaG~vG~~-~a~~l~~~~~-~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~--~~~~~a-~~~--aDvVi 77 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSS-YAFAMAQQGI-AEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY--SGEYSD-CKD--ADLVV 77 (318)
T ss_dssp BCEEEEECCSHHHHH-HHHHHHHHTC-CSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE--ECCGGG-GTT--CSEEE
T ss_pred CCEEEEECCCHHHHH-HHHHHHcCCC-CCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE--ECCHHH-hCC--CCEEE
Confidence 479999999999975 4555554433 3445778999998886444322221 122111 134444 554 89999
Q ss_pred EecCCcc
Q 018445 79 VVLAGQA 85 (355)
Q Consensus 79 I~tp~~~ 85 (355)
++.+...
T Consensus 78 i~ag~~~ 84 (318)
T 1ez4_A 78 ITAGAPQ 84 (318)
T ss_dssp ECCCC--
T ss_pred ECCCCCC
Confidence 9987654
No 302
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=95.71 E-value=0.0042 Score=55.08 Aligned_cols=61 Identities=15% Similarity=0.188 Sum_probs=46.3
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||.. ....+...+ .+|+ ++|+++++.+ + .+ .+++++++. .|+|++++|
T Consensus 145 ~~vgIIG~G~IG~~-~A~~l~~~G--~~V~-~~d~~~~~~~------------~--~~--~~l~ell~~--aDvV~l~~p 202 (311)
T 2cuk_A 145 LTLGLVGMGRIGQA-VAKRALAFG--MRVV-YHARTPKPLP------------Y--PF--LSLEELLKE--ADVVSLHTP 202 (311)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CEEE-EECSSCCSSS------------S--CB--CCHHHHHHH--CSEEEECCC
T ss_pred CEEEEEEECHHHHH-HHHHHHHCC--CEEE-EECCCCcccc------------c--cc--CCHHHHHhh--CCEEEEeCC
Confidence 47999999999986 777777665 5764 5788765432 1 12 689999986 799999999
Q ss_pred Ccc
Q 018445 83 GQA 85 (355)
Q Consensus 83 ~~~ 85 (355)
...
T Consensus 203 ~~~ 205 (311)
T 2cuk_A 203 LTP 205 (311)
T ss_dssp CCT
T ss_pred CCh
Confidence 864
No 303
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=95.70 E-value=0.021 Score=50.86 Aligned_cols=78 Identities=10% Similarity=0.049 Sum_probs=47.1
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhc---CCccccccCcchhhhhcCCCccEEE
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHF---ADVECVWGDNGLEQIIKEDSILGVA 78 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ell~~~~~D~V~ 78 (355)
.+||+|||+|.+|.. .+..|...+- +.-+.++|+++++++..+....... ..+... .+++++ +++ .|+|+
T Consensus 9 ~~KI~IiGaG~vG~~-la~~l~~~~~-~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~--~~~~~a-~~~--aDvVi 81 (326)
T 2zqz_A 9 HQKVILVGDGAVGSS-YAYAMVLQGI-AQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY--SAEYSD-AKD--ADLVV 81 (326)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHHTC-CSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE--ECCGGG-GGG--CSEEE
T ss_pred CCEEEEECCCHHHHH-HHHHHHcCCC-CCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE--ECCHHH-hCC--CCEEE
Confidence 579999999999975 4555554432 3445778999998877544222211 122111 134444 554 89999
Q ss_pred EecCCccc
Q 018445 79 VVLAGQAQ 86 (355)
Q Consensus 79 I~tp~~~H 86 (355)
++.+...-
T Consensus 82 i~ag~~~k 89 (326)
T 2zqz_A 82 ITAGAPQK 89 (326)
T ss_dssp ECCCCC--
T ss_pred EcCCCCCC
Confidence 99876543
No 304
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=95.70 E-value=0.02 Score=53.77 Aligned_cols=74 Identities=9% Similarity=0.136 Sum_probs=47.0
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh---------c-C----CccccccCcchhhhh
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH---------F-A----DVECVWGDNGLEQII 69 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~---------~-~----~~~~~~~~~~~~ell 69 (355)
||||||+|.||.. ....+...+ .+| -++|+++++++...+..... . + ...... +++++ .+
T Consensus 39 kV~VIGaG~MG~~-iA~~la~~G--~~V-~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~-~~ 112 (463)
T 1zcj_A 39 SVGVLGLGTMGRG-IAISFARVG--ISV-VAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTK-EL 112 (463)
T ss_dssp EEEEECCSHHHHH-HHHHHHTTT--CEE-EEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGG-GG
T ss_pred EEEEECcCHHHHH-HHHHHHhCC--CeE-EEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHH-HH
Confidence 8999999999975 666666544 566 46799998887654421100 0 0 000011 25674 44
Q ss_pred cCCCccEEEEecCCcc
Q 018445 70 KEDSILGVAVVLAGQA 85 (355)
Q Consensus 70 ~~~~~D~V~I~tp~~~ 85 (355)
+ +.|+|++++|...
T Consensus 113 ~--~aDlVIeaVpe~~ 126 (463)
T 1zcj_A 113 S--TVDLVVEAVFEDM 126 (463)
T ss_dssp T--TCSEEEECCCSCH
T ss_pred C--CCCEEEEcCCCCH
Confidence 4 4899999999865
No 305
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=95.70 E-value=0.0089 Score=53.49 Aligned_cols=65 Identities=9% Similarity=0.222 Sum_probs=46.9
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||.. ....+...+ .+|+ ++|+++++. + + + .+ .+ .++++++++. .|+|++++|
T Consensus 147 ~~vgIiG~G~IG~~-~A~~l~~~G--~~V~-~~d~~~~~~--~-~---~---~~--~~-~~~l~ell~~--aDvV~l~~p 208 (333)
T 1j4a_A 147 QVVGVVGTGHIGQV-FMQIMEGFG--AKVI-TYDIFRNPE--L-E---K---KG--YY-VDSLDDLYKQ--ADVISLHVP 208 (333)
T ss_dssp SEEEEECCSHHHHH-HHHHHHHTT--CEEE-EECSSCCHH--H-H---H---TT--CB-CSCHHHHHHH--CSEEEECSC
T ss_pred CEEEEEccCHHHHH-HHHHHHHCC--CEEE-EECCCcchh--H-H---h---hC--ee-cCCHHHHHhh--CCEEEEcCC
Confidence 48999999999986 777777665 6764 578877654 2 2 1 11 12 1489999986 899999999
Q ss_pred Ccc
Q 018445 83 GQA 85 (355)
Q Consensus 83 ~~~ 85 (355)
...
T Consensus 209 ~~~ 211 (333)
T 1j4a_A 209 DVP 211 (333)
T ss_dssp CCG
T ss_pred CcH
Confidence 754
No 306
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=95.69 E-value=0.0024 Score=55.83 Aligned_cols=82 Identities=16% Similarity=0.134 Sum_probs=50.1
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCc--cccccCcchhhhhcCCCccEEEEe
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADV--ECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
|||+|||+|.||.. +...|.+.+ .+| .++++++++.+.+.. ....+. ......++. +.+++ .|+|+++
T Consensus 1 m~i~iiG~G~~G~~-~a~~l~~~g--~~V-~~~~r~~~~~~~l~~---~~~~~~~~~~~~~~~~~-~~~~~--~d~vi~~ 70 (291)
T 1ks9_A 1 MKITVLGCGALGQL-WLTALCKQG--HEV-QGWLRVPQPYCSVNL---VETDGSIFNESLTANDP-DFLAT--SDLLLVT 70 (291)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CEE-EEECSSCCSEEEEEE---ECTTSCEEEEEEEESCH-HHHHT--CSEEEEC
T ss_pred CeEEEECcCHHHHH-HHHHHHhCC--CCE-EEEEcCccceeeEEE---EcCCCceeeeeeeecCc-cccCC--CCEEEEE
Confidence 58999999999985 777777654 465 456888766543211 000010 000001333 44554 8999999
Q ss_pred cCCcccHHHHHHHH
Q 018445 81 LAGQAQVDTSLKLL 94 (355)
Q Consensus 81 tp~~~H~~~~~~al 94 (355)
+|+....+++....
T Consensus 71 v~~~~~~~v~~~l~ 84 (291)
T 1ks9_A 71 LKAWQVSDAVKSLA 84 (291)
T ss_dssp SCGGGHHHHHHHHH
T ss_pred ecHHhHHHHHHHHH
Confidence 99998766665543
No 307
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=95.67 E-value=0.025 Score=50.80 Aligned_cols=76 Identities=13% Similarity=0.094 Sum_probs=45.0
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCC-------------------HHHHHHHHHHHhhhcCCccccccCc
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRS-------------------EESAKSAAEVARKHFADVECVWGDN 63 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 63 (355)
-||.|||+|..|.. .+.+|...+ +.=+.++|.+ ..+++.++++..+..|.+.......
T Consensus 37 ~~VlivG~GGlG~~-ia~~La~~G--vg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~~ 113 (346)
T 1y8q_A 37 SRVLLVGLKGLGAE-IAKNLILAG--VKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDTE 113 (346)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHT--CSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEECS
T ss_pred CeEEEECCCHHHHH-HHHHHHHcC--CCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEec
Confidence 48999999999986 788887654 3333556654 2466666666655556654322111
Q ss_pred c----hhhhhcCCCccEEEEecCC
Q 018445 64 G----LEQIIKEDSILGVAVVLAG 83 (355)
Q Consensus 64 ~----~~ell~~~~~D~V~I~tp~ 83 (355)
+ .+++++. .|+|+.++-+
T Consensus 114 ~~~~~~~~~~~~--~dvVv~~~d~ 135 (346)
T 1y8q_A 114 DIEKKPESFFTQ--FDAVCLTCCS 135 (346)
T ss_dssp CGGGCCHHHHTT--CSEEEEESCC
T ss_pred ccCcchHHHhcC--CCEEEEcCCC
Confidence 2 2344433 5666665543
No 308
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.66 E-value=0.015 Score=54.55 Aligned_cols=81 Identities=20% Similarity=0.217 Sum_probs=54.4
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcC---CCccEEE
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKE---DSILGVA 78 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~---~~~D~V~ 78 (355)
+|||.|+|+|..|.. ....|...+ .+|+ +.|.++++++.+.+ ++ ++...++..+-.+.|.+ .+.|+++
T Consensus 3 ~M~iiI~G~G~vG~~-la~~L~~~~--~~v~-vId~d~~~~~~~~~---~~--~~~~i~Gd~~~~~~L~~Agi~~ad~~i 73 (461)
T 4g65_A 3 AMKIIILGAGQVGGT-LAENLVGEN--NDIT-IVDKDGDRLRELQD---KY--DLRVVNGHASHPDVLHEAGAQDADMLV 73 (461)
T ss_dssp CEEEEEECCSHHHHH-HHHHTCSTT--EEEE-EEESCHHHHHHHHH---HS--SCEEEESCTTCHHHHHHHTTTTCSEEE
T ss_pred cCEEEEECCCHHHHH-HHHHHHHCC--CCEE-EEECCHHHHHHHHH---hc--CcEEEEEcCCCHHHHHhcCCCcCCEEE
Confidence 589999999999974 566666544 4664 55999999998876 33 44444443333444442 5689999
Q ss_pred EecCCcccHHHHH
Q 018445 79 VVLAGQAQVDTSL 91 (355)
Q Consensus 79 I~tp~~~H~~~~~ 91 (355)
.+|+++.---++.
T Consensus 74 a~t~~De~Nl~~~ 86 (461)
T 4g65_A 74 AVTNTDETNMAAC 86 (461)
T ss_dssp ECCSCHHHHHHHH
T ss_pred EEcCChHHHHHHH
Confidence 8888875433333
No 309
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=95.65 E-value=0.014 Score=50.99 Aligned_cols=74 Identities=16% Similarity=0.036 Sum_probs=43.9
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh---cCCccccccCcchhhhhcCCCccEEEE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH---FADVECVWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ell~~~~~D~V~I 79 (355)
|||+|||+|++|.. ..-.|...+- +.=+.++|.++++++--+.-.... .+......+.++|+++ ++ .|+|+|
T Consensus 1 MKV~IiGaG~VG~~-~a~~l~~~~~-~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~-~~--aDvVvi 75 (294)
T 2x0j_A 1 MKLGFVGAGRVGST-SAFTCLLNLD-VDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLL-KG--SEIIVV 75 (294)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHSC-CSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGG-TT--CSEEEE
T ss_pred CEEEEECcCHHHHH-HHHHHHhCCC-CCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHh-CC--CCEEEE
Confidence 79999999999975 4444444332 333478899998776544322111 1111112223577654 43 799999
Q ss_pred ec
Q 018445 80 VL 81 (355)
Q Consensus 80 ~t 81 (355)
+.
T Consensus 76 tA 77 (294)
T 2x0j_A 76 TA 77 (294)
T ss_dssp CC
T ss_pred ec
Confidence 85
No 310
>1dpg_A G6PD, glucose 6-phosphate dehydrogenase; oxidoreductase, NADP/NAD, glucose metabolism, oxidoreductase (CHOH(D) - NAD(P)); 2.00A {Leuconostoc mesenteroides} SCOP: c.2.1.3 d.81.1.5 PDB: 1e7y_A* 1e7m_A* 1h93_A 1h94_A* 1h9a_A* 1e77_A* 1h9b_A 2dpg_A*
Probab=95.64 E-value=0.04 Score=51.10 Aligned_cols=121 Identities=13% Similarity=0.070 Sum_probs=71.0
Q ss_pred cEEEEecCCcccHHHHHHHHHcCC-------eEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHH
Q 018445 75 LGVAVVLAGQAQVDTSLKLLKAGK-------HVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVE 147 (355)
Q Consensus 75 D~V~I~tp~~~H~~~~~~al~~Gk-------hVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~ 147 (355)
-+.+.++||..-..++...-++|. -|.+|||++.|++.|++|.+...+.=.+ .-++-+.|-. --..+|-
T Consensus 112 r~fYLA~pP~~f~~i~~~L~~~gl~~~~g~~RvViEKPFG~DL~SA~~Ln~~l~~~F~E---~qIyRIDHYL-GKE~VQN 187 (485)
T 1dpg_A 112 RIFYMSVAPRFFGTIAKYLKSEGLLADTGYNRLMIEKPFGTSYDTAAELQNDLENAFDD---NQLFRIDHYL-GKEMVQN 187 (485)
T ss_dssp EEEEECSCGGGHHHHHHHHHHTTCSCSSSCEEEEECSCCCSSHHHHHHHHHHHTTTCCG---GGEEECCGGG-GSGGGGG
T ss_pred eEEEEeCCHHHHHHHHHHHHhcCCCCCCCceEEEEeCCCCCchhhHHHHHHHHHhhCCH---HHEeeccccc-cHHHHHH
Confidence 488999999988888877776663 6999999999999999999888775111 2222222211 0011111
Q ss_pred -----HHHH-HHH---hCCeeEEEEEEeeccCCCCCccCccccccccCccccchhh-HHHHHHHHHh
Q 018445 148 -----CKKL-IAE---IGDMMSVQVIVEGSMNSSNPYFSSSWRRNFTGGFILDMGV-HFIAGLRMIT 204 (355)
Q Consensus 148 -----~k~~-i~~---iG~i~~v~~~~~~~~~~~~~~~~~~w~~~~~gg~l~d~g~-H~id~~~~l~ 204 (355)
.-+. ... =--|-+|.+++.....- . .++..-...|++-|+.- |.+-++..+.
T Consensus 188 ll~lRFaN~ifeplWNr~~Id~VqIt~aE~~Gv---e--gRggYYD~~GalRDmvQNHLlQlL~lvA 249 (485)
T 1dpg_A 188 IAALRFGNPIFDAAWNKDYIKNVQVTLSEVLGV---E--ERAGYYDTAGALLDMIQNHTMQIVGWLA 249 (485)
T ss_dssp HHHHHHTCHHHHTTSSTTTEEEEEEEEECSCCC---T--TCHHHHHHHHHHHHTTTTHHHHHHHHHH
T ss_pred HHHHHHhhHhhhhhhcccCceeEEEEEecCCCc---C--hhhcchhccchHHHHHHHHHHHHHHHHH
Confidence 1111 111 24577777776432211 0 11111124588888854 7776666555
No 311
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=95.64 E-value=0.019 Score=51.07 Aligned_cols=113 Identities=4% Similarity=0.012 Sum_probs=70.5
Q ss_pred ceEEEEecc-cccchhccch--hhhcCCeEEEEEEEeCCHHH-HHHHHHHHhhhcCCccccccCcchhhhhcC-CCccEE
Q 018445 3 PRIAILGAG-IFVKTQYIPR--LAEISDLVSLKFIWSRSEES-AKSAAEVARKHFADVECVWGDNGLEQIIKE-DSILGV 77 (355)
Q Consensus 3 ~rigiiG~G-~~~~~~~~~~--l~~~~~~~~vvai~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ell~~-~~~D~V 77 (355)
.||.|-|+- ++.+. .+.. +.+.++ .++++..++.... .+.+. +.....+++. | .|++|+++. +++|++
T Consensus 11 tkviV~G~~Gk~~~~-ml~~~~~~~r~~-~~vVagV~P~~~g~~~~v~--~G~~~~Gvpv-y--~sv~ea~~~~p~~Dla 83 (334)
T 3mwd_B 11 TKAIVWGMQTRAVQG-MLDFDYVCSRDE-PSVAAMVYPFTGDHKQKFY--WGHKEILIPV-F--KNMADAMRKHPEVDVL 83 (334)
T ss_dssp CCEEEESCCHHHHHH-HHHHHHHTTCSS-CSEEEEECTTSCSEEEEEE--ETTEEEEEEE-E--SSHHHHHHHCTTCCEE
T ss_pred CeEEEECCchHHHHH-HHHhcccccCCC-ceEEEEEcCCCCCccceEe--ccCccCCcee-e--CCHHHHhhcCCCCcEE
Confidence 688888874 33222 2221 112233 7899999987541 00000 0000013443 3 899999875 479999
Q ss_pred EEecCCcccHHHHHHHHH-cCC-eEEEecCCCCCHHHHHHHHHHhhcc
Q 018445 78 AVVLAGQAQVDTSLKLLK-AGK-HVIQEKPAAANISEIENALSRYNSI 123 (355)
Q Consensus 78 ~I~tp~~~H~~~~~~al~-~Gk-hVl~EKP~a~~~~e~~~l~~~a~~~ 123 (355)
+|++|+..-.+.+.+++. +|. .|.|=- -....++.++|.++++++
T Consensus 84 Vi~vp~~~a~~ai~ea~~~~Gv~~vViiT-~G~~e~~~~~l~~~a~~~ 130 (334)
T 3mwd_B 84 INFASLRSAYDSTMETMNYAQIRTIAIIA-EGIPEALTRKLIKKADQK 130 (334)
T ss_dssp EECCCTTTHHHHHHHHTTSTTCCEEEECC-SCCCHHHHHHHHHHHHHH
T ss_pred EEecCHHHHHHHHHHHHHHCCCCEEEEEC-CCCCHHHHHHHHHHHHHc
Confidence 999999998888888888 884 566511 134446778999999994
No 312
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=95.59 E-value=0.016 Score=51.23 Aligned_cols=76 Identities=14% Similarity=0.078 Sum_probs=44.9
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh--c--CCccccccCcchhhhhcCCCccEEE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH--F--ADVECVWGDNGLEQIIKEDSILGVA 78 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~ell~~~~~D~V~ 78 (355)
|||+|||+|.+|.. .+..+...+- +.-+.++|+++++++..+...... + .... ...+++++ .+++ .|+|+
T Consensus 1 Mkv~ViGaG~vG~~-~a~~l~~~~~-~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~-v~~~~~~~-a~~~--aDvVi 74 (314)
T 3nep_X 1 MKVTVIGAGNVGAT-VAECVARQDV-AKEVVMVDIKDGMPQGKALDMRESSPIHGFDTR-VTGTNDYG-PTED--SDVCI 74 (314)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHTC-SSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCE-EEEESSSG-GGTT--CSEEE
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCC-CCEEEEEeCchHHHHHHHHHHhccccccCCCcE-EEECCCHH-HhCC--CCEEE
Confidence 69999999999975 6666665442 333477899998876543322111 1 0111 11113444 4444 79999
Q ss_pred EecCCc
Q 018445 79 VVLAGQ 84 (355)
Q Consensus 79 I~tp~~ 84 (355)
|+.+..
T Consensus 75 i~ag~~ 80 (314)
T 3nep_X 75 ITAGLP 80 (314)
T ss_dssp ECCCC-
T ss_pred ECCCCC
Confidence 997554
No 313
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=95.57 E-value=0.02 Score=52.64 Aligned_cols=63 Identities=14% Similarity=0.056 Sum_probs=46.5
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
.+|||||+|.+|+. ....+...+ .+| -++|+++.++..+.. . +.. + .+++|++.. .|+|+.++
T Consensus 212 ktVgIiG~G~IG~~-vA~~Lka~G--a~V-iv~D~~p~~a~~A~~----~--G~~--~--~sL~eal~~--ADVVilt~ 274 (436)
T 3h9u_A 212 KTACVCGYGDVGKG-CAAALRGFG--ARV-VVTEVDPINALQAAM----E--GYQ--V--LLVEDVVEE--AHIFVTTT 274 (436)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CEE-EEECSCHHHHHHHHH----T--TCE--E--CCHHHHTTT--CSEEEECS
T ss_pred CEEEEEeeCHHHHH-HHHHHHHCC--CEE-EEECCChhhhHHHHH----h--CCe--e--cCHHHHHhh--CCEEEECC
Confidence 48999999999986 777777765 575 568999987765543 1 332 1 689999987 78888644
No 314
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=95.57 E-value=0.0026 Score=57.08 Aligned_cols=88 Identities=18% Similarity=0.154 Sum_probs=58.5
Q ss_pred CceEEEEe-cccccchhccchhhhc--CCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchh-hhhcCCCccEE
Q 018445 2 APRIAILG-AGIFVKTQYIPRLAEI--SDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLE-QIIKEDSILGV 77 (355)
Q Consensus 2 ~~rigiiG-~G~~~~~~~~~~l~~~--~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-ell~~~~~D~V 77 (355)
.+|||||| +|..|.. .++.|.++ |. ++++.+.+.+..- +.+. +.+....+ .+.+ +.+ .++|+|
T Consensus 1 ~~~VaIvGatG~vG~e-l~~lL~~h~fp~-~el~~~~s~~~aG-~~~~------~~~~~~~~--~~~~~~~~--~~~Dvv 67 (344)
T 3tz6_A 1 GLSIGIVGATGQVGQV-MRTLLDERDFPA-SAVRFFASARSQG-RKLA------FRGQEIEV--EDAETADP--SGLDIA 67 (344)
T ss_dssp CEEEEEETTTSHHHHH-HHHHHHHTTCCE-EEEEEEECTTTSS-CEEE------ETTEEEEE--EETTTSCC--TTCSEE
T ss_pred CCEEEEECCCChHHHH-HHHHHHhCCCCc-eEEEEEECcccCC-Ccee------ecCCceEE--EeCCHHHh--ccCCEE
Confidence 37999999 7778886 78888876 54 8999887654321 1000 10111111 2222 122 359999
Q ss_pred EEecCCcccHHHHHHHHHcCCeEEE
Q 018445 78 AVVLAGQAQVDTSLKLLKAGKHVIQ 102 (355)
Q Consensus 78 ~I~tp~~~H~~~~~~al~~GkhVl~ 102 (355)
+.|+|.....+++..++++|..|+-
T Consensus 68 f~a~~~~~s~~~a~~~~~~G~~vID 92 (344)
T 3tz6_A 68 LFSAGSAMSKVQAPRFAAAGVTVID 92 (344)
T ss_dssp EECSCHHHHHHHHHHHHHTTCEEEE
T ss_pred EECCChHHHHHHHHHHHhCCCEEEE
Confidence 9999999999999999999986554
No 315
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=95.57 E-value=0.0067 Score=54.41 Aligned_cols=63 Identities=8% Similarity=0.106 Sum_probs=46.0
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||.. ....+...+ .+|+ ++|++++.. . .. . ..+ .++++++++ .|+|++++|
T Consensus 149 ktvgIiGlG~IG~~-vA~~l~~~G--~~V~-~~d~~~~~~--~-----~~--~--~~~--~~l~ell~~--aDvV~l~~P 209 (343)
T 2yq5_A 149 LTVGLIGVGHIGSA-VAEIFSAMG--AKVI-AYDVAYNPE--F-----EP--F--LTY--TDFDTVLKE--ADIVSLHTP 209 (343)
T ss_dssp SEEEEECCSHHHHH-HHHHHHHTT--CEEE-EECSSCCGG--G-----TT--T--CEE--CCHHHHHHH--CSEEEECCC
T ss_pred CeEEEEecCHHHHH-HHHHHhhCC--CEEE-EECCChhhh--h-----hc--c--ccc--cCHHHHHhc--CCEEEEcCC
Confidence 48999999999986 777777764 6775 568876541 1 11 1 122 689999987 899999999
Q ss_pred Cc
Q 018445 83 GQ 84 (355)
Q Consensus 83 ~~ 84 (355)
..
T Consensus 210 lt 211 (343)
T 2yq5_A 210 LF 211 (343)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 316
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=95.55 E-value=0.0075 Score=53.18 Aligned_cols=62 Identities=21% Similarity=0.293 Sum_probs=46.0
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||+. ....+...+ .+|+ ++|++++ +. +.. . +.+++++++. .|+|++++|
T Consensus 125 ~~vgIIG~G~IG~~-~A~~l~~~G--~~V~-~~dr~~~--~~----------~~~-~--~~~l~ell~~--aDvV~l~~P 183 (303)
T 1qp8_A 125 EKVAVLGLGEIGTR-VGKILAALG--AQVR-GFSRTPK--EG----------PWR-F--TNSLEEALRE--ARAAVCALP 183 (303)
T ss_dssp CEEEEESCSTHHHH-HHHHHHHTT--CEEE-EECSSCC--CS----------SSC-C--BSCSHHHHTT--CSEEEECCC
T ss_pred CEEEEEccCHHHHH-HHHHHHHCC--CEEE-EECCCcc--cc----------Ccc-c--CCCHHHHHhh--CCEEEEeCc
Confidence 58999999999986 777777665 6764 5788765 11 111 1 2689999987 899999999
Q ss_pred Ccc
Q 018445 83 GQA 85 (355)
Q Consensus 83 ~~~ 85 (355)
...
T Consensus 184 ~~~ 186 (303)
T 1qp8_A 184 LNK 186 (303)
T ss_dssp CST
T ss_pred Cch
Confidence 864
No 317
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.53 E-value=0.039 Score=43.06 Aligned_cols=104 Identities=13% Similarity=0.148 Sum_probs=59.5
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCC-HHHHHHHHHHHhhhcCCccccccC-cchhhhhc--CCCccEEE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRS-EESAKSAAEVARKHFADVECVWGD-NGLEQIIK--EDSILGVA 78 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ell~--~~~~D~V~ 78 (355)
-+|.|+|+|.+|.. ....|.+.+ .+|+.+ |++ +++.+.+.+.. ..++...++. ++.+.+.+ -.+.|+|+
T Consensus 4 ~~vlI~G~G~vG~~-la~~L~~~g--~~V~vi-d~~~~~~~~~~~~~~---~~~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (153)
T 1id1_A 4 DHFIVCGHSILAIN-TILQLNQRG--QNVTVI-SNLPEDDIKQLEQRL---GDNADVIPGDSNDSSVLKKAGIDRCRAIL 76 (153)
T ss_dssp SCEEEECCSHHHHH-HHHHHHHTT--CCEEEE-ECCCHHHHHHHHHHH---CTTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred CcEEEECCCHHHHH-HHHHHHHCC--CCEEEE-ECCChHHHHHHHHhh---cCCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence 58999999999985 777777654 466544 776 56666655421 1123222221 23333321 24589999
Q ss_pred EecCCcccHHHHHHHH-Hc-C-CeEEEecCCCCCHHHHHHH
Q 018445 79 VVLAGQAQVDTSLKLL-KA-G-KHVIQEKPAAANISEIENA 116 (355)
Q Consensus 79 I~tp~~~H~~~~~~al-~~-G-khVl~EKP~a~~~~e~~~l 116 (355)
++|+++.--..+...+ +. + .+|++. +.+.+..+.+
T Consensus 77 ~~~~~d~~n~~~~~~a~~~~~~~~ii~~---~~~~~~~~~l 114 (153)
T 1id1_A 77 ALSDNDADNAFVVLSAKDMSSDVKTVLA---VSDSKNLNKI 114 (153)
T ss_dssp ECSSCHHHHHHHHHHHHHHTSSSCEEEE---CSSGGGHHHH
T ss_pred EecCChHHHHHHHHHHHHHCCCCEEEEE---ECCHHHHHHH
Confidence 9999875444443333 33 3 467663 4455554444
No 318
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.50 E-value=0.019 Score=50.79 Aligned_cols=78 Identities=14% Similarity=-0.007 Sum_probs=51.3
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCC---HHHHHHHHHHHhhhcCCccccccCcch---hhhhcCCCccEE
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRS---EESAKSAAEVARKHFADVECVWGDNGL---EQIIKEDSILGV 77 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ell~~~~~D~V 77 (355)
++.|+|+|.+++. .+..|.+.+ +.-+.|++|+ .++++++++.....++.....+.+.+. .+.+.+ .|+|
T Consensus 150 ~~lVlGAGGaara-ia~~L~~~G--~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~--~DiI 224 (312)
T 3t4e_A 150 TMVLLGAGGAATA-IGAQAAIEG--IKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALAS--ADIL 224 (312)
T ss_dssp EEEEECCSHHHHH-HHHHHHHTT--CSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHH--CSEE
T ss_pred EEEEECcCHHHHH-HHHHHHHcC--CCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccC--ceEE
Confidence 7899999999875 677777754 5344788999 888888877543332111111111333 344554 8999
Q ss_pred EEecCCccc
Q 018445 78 AVVLAGQAQ 86 (355)
Q Consensus 78 ~I~tp~~~H 86 (355)
+.+||-..+
T Consensus 225 INaTp~Gm~ 233 (312)
T 3t4e_A 225 TNGTKVGMK 233 (312)
T ss_dssp EECSSTTST
T ss_pred EECCcCCCC
Confidence 999998874
No 319
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=95.40 E-value=0.022 Score=53.63 Aligned_cols=66 Identities=14% Similarity=0.051 Sum_probs=48.5
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
-+|+|||+|.+|.. .+..++..+ .+| -++|+++.+++.+.+ . ++. + .++++++.. .|+|+.+++
T Consensus 275 ktV~IiG~G~IG~~-~A~~lka~G--a~V-iv~d~~~~~~~~A~~----~--Ga~--~--~~l~e~l~~--aDvVi~atg 338 (494)
T 3ce6_A 275 KKVLICGYGDVGKG-CAEAMKGQG--ARV-SVTEIDPINALQAMM----E--GFD--V--VTVEEAIGD--ADIVVTATG 338 (494)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CEE-EEECSCHHHHHHHHH----T--TCE--E--CCHHHHGGG--CSEEEECSS
T ss_pred CEEEEEccCHHHHH-HHHHHHHCC--CEE-EEEeCCHHHHHHHHH----c--CCE--E--ecHHHHHhC--CCEEEECCC
Confidence 38999999999985 677777664 565 567999998876543 2 332 2 567888764 899999986
Q ss_pred Cc
Q 018445 83 GQ 84 (355)
Q Consensus 83 ~~ 84 (355)
+.
T Consensus 339 t~ 340 (494)
T 3ce6_A 339 NK 340 (494)
T ss_dssp SS
T ss_pred CH
Confidence 54
No 320
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=95.37 E-value=0.019 Score=49.58 Aligned_cols=74 Identities=15% Similarity=0.070 Sum_probs=52.0
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecCC
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLAG 83 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp~ 83 (355)
|+.|+|+|..++. .+..|...+ +.-+.|++|+.++++.+++.+...++..... ...+.+ ++.|+|+.+||-
T Consensus 127 ~~lilGaGGaara-i~~aL~~~g--~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~----~~~~~~--~~~dliiNaTp~ 197 (269)
T 3tum_A 127 RALVIGCGGVGSA-IAYALAEAG--IASITLCDPSTARMGAVCELLGNGFPGLTVS----TQFSGL--EDFDLVANASPV 197 (269)
T ss_dssp EEEEECCSHHHHH-HHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHHCTTCEEE----SCCSCS--TTCSEEEECSST
T ss_pred eEEEEecHHHHHH-HHHHHHHhC--CCeEEEeCCCHHHHHHHHHHHhccCCcceeh----hhhhhh--hcccccccCCcc
Confidence 7899999998875 677777655 4445888999999999988665555444321 112222 348999999997
Q ss_pred ccc
Q 018445 84 QAQ 86 (355)
Q Consensus 84 ~~H 86 (355)
..+
T Consensus 198 Gm~ 200 (269)
T 3tum_A 198 GMG 200 (269)
T ss_dssp TCS
T ss_pred ccC
Confidence 643
No 321
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=95.31 E-value=0.0051 Score=55.76 Aligned_cols=94 Identities=15% Similarity=0.197 Sum_probs=59.7
Q ss_pred ceEEEEe-cccccchhccc-hhhhcC-CeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccc-cCcchhhhhcCCCccEEE
Q 018445 3 PRIAILG-AGIFVKTQYIP-RLAEIS-DLVSLKFIWSRSEESAKSAAEVARKHFADVECVW-GDNGLEQIIKEDSILGVA 78 (355)
Q Consensus 3 ~rigiiG-~G~~~~~~~~~-~l~~~~-~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ell~~~~~D~V~ 78 (355)
+||||+| +|.+|+. .++ .+.+++ ..++++.+..++..+ ... .+.+....+ ...+.++ ++ ++|+|+
T Consensus 2 ~kVaIvGAtG~vG~~-llr~ll~~~~~~~v~i~~~~~~s~G~--~v~-----~~~g~~i~~~~~~~~~~-~~--~~DvVf 70 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSV-LMQRMVEERDFDAIRPVFFSTSQLGQ--AAP-----SFGGTTGTLQDAFDLEA-LK--ALDIIV 70 (367)
T ss_dssp CEEEEESTTSHHHHH-HHHHHHHTTGGGGSEEEEEESSSTTS--BCC-----GGGTCCCBCEETTCHHH-HH--TCSEEE
T ss_pred cEEEEECCCCHHHHH-HHHHHHhcCCCCeEEEEEEEeCCCCC--Ccc-----ccCCCceEEEecCChHH-hc--CCCEEE
Confidence 6999999 9999986 777 455442 125776666643221 110 000111111 0023444 34 599999
Q ss_pred EecCCcccHHHHHHHHHcCC-eEEEecCCC
Q 018445 79 VVLAGQAQVDTSLKLLKAGK-HVIQEKPAA 107 (355)
Q Consensus 79 I~tp~~~H~~~~~~al~~Gk-hVl~EKP~a 107 (355)
-|+|.....+++..++++|. -+++.-|-+
T Consensus 71 ~a~g~~~s~~~a~~~~~~G~k~vVID~ss~ 100 (367)
T 1t4b_A 71 TCQGGDYTNEIYPKLRESGWQGYWIDAASS 100 (367)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCCEEEECSST
T ss_pred ECCCchhHHHHHHHHHHCCCCEEEEcCChh
Confidence 99999999999999999995 577776544
No 322
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=95.30 E-value=0.014 Score=52.86 Aligned_cols=62 Identities=13% Similarity=0.126 Sum_probs=44.2
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||.. ....+...+ ++|++ +|+..+.. .. +. . +.+++|++++ .|+|++++|
T Consensus 120 ktvGIIGlG~IG~~-vA~~l~a~G--~~V~~-~d~~~~~~--------~~--~~--~--~~sl~ell~~--aDiV~l~~P 179 (381)
T 3oet_A 120 RTIGIVGVGNVGSR-LQTRLEALG--IRTLL-CDPPRAAR--------GD--EG--D--FRTLDELVQE--ADVLTFHTP 179 (381)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CEEEE-ECHHHHHT--------TC--CS--C--BCCHHHHHHH--CSEEEECCC
T ss_pred CEEEEEeECHHHHH-HHHHHHHCC--CEEEE-ECCChHHh--------cc--Cc--c--cCCHHHHHhh--CCEEEEcCc
Confidence 48999999999986 777777765 67754 46533211 11 21 2 2789999987 899999999
Q ss_pred Cc
Q 018445 83 GQ 84 (355)
Q Consensus 83 ~~ 84 (355)
..
T Consensus 180 lt 181 (381)
T 3oet_A 180 LY 181 (381)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 323
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=95.29 E-value=0.032 Score=48.30 Aligned_cols=74 Identities=14% Similarity=0.118 Sum_probs=51.7
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
-++.|+|+|.+|+. .+..|.+.+ .+| .++++++++++.+++...... .+ .. .+++++.+ .++|+|+.+||
T Consensus 120 k~vlViGaGg~g~a-~a~~L~~~G--~~V-~v~~R~~~~~~~la~~~~~~~-~~--~~--~~~~~~~~-~~~DivVn~t~ 189 (271)
T 1nyt_A 120 LRILLIGAGGASRG-VLLPLLSLD--CAV-TITNRTVSRAEELAKLFAHTG-SI--QA--LSMDELEG-HEFDLIINATS 189 (271)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CEE-EEECSSHHHHHHHHHHTGGGS-SE--EE--CCSGGGTT-CCCSEEEECCS
T ss_pred CEEEEECCcHHHHH-HHHHHHHcC--CEE-EEEECCHHHHHHHHHHhhccC-Ce--eE--ecHHHhcc-CCCCEEEECCC
Confidence 37999999999975 777777765 455 578999999988876432211 11 11 34555543 56999999999
Q ss_pred Cccc
Q 018445 83 GQAQ 86 (355)
Q Consensus 83 ~~~H 86 (355)
...+
T Consensus 190 ~~~~ 193 (271)
T 1nyt_A 190 SGIS 193 (271)
T ss_dssp CGGG
T ss_pred CCCC
Confidence 8765
No 324
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=95.24 E-value=0.022 Score=50.41 Aligned_cols=75 Identities=13% Similarity=0.054 Sum_probs=46.4
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhc---CCccccccCcchhhhhcCCCccEEEE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHF---ADVECVWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ell~~~~~D~V~I 79 (355)
+||+|||+|.+|.. .+..+...+. +.=+.++|+++++++..+....... ..+.... +++++ +++ .|+|++
T Consensus 1 ~KI~IiGaG~vG~~-~a~~l~~~~~-~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~--~~~~a-~~~--aD~Vii 73 (310)
T 2xxj_A 1 MKVGIVGSGMVGSA-TAYALALLGV-AREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA--GSYGD-LEG--ARAVVL 73 (310)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTC-CSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE--CCGGG-GTT--EEEEEE
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCC-CCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE--CCHHH-hCC--CCEEEE
Confidence 58999999999975 4545554432 3445778999998886444322211 1222211 35444 544 899999
Q ss_pred ecCCc
Q 018445 80 VLAGQ 84 (355)
Q Consensus 80 ~tp~~ 84 (355)
+.+..
T Consensus 74 ~ag~~ 78 (310)
T 2xxj_A 74 AAGVA 78 (310)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 98764
No 325
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=95.22 E-value=0.029 Score=51.29 Aligned_cols=74 Identities=12% Similarity=0.157 Sum_probs=50.4
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEE-EEEeCC----HHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEE
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLK-FIWSRS----EESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVA 78 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vv-ai~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~ 78 (355)
+|+|||+|..|.. |..+|+..+ ++|+ |+-.-+ ..+.+.+. +. +... .+++|+.+. .|+|+
T Consensus 39 ~IaVIGyGsQG~A-qAlNLRDSG--v~V~Vglr~~s~~e~~~S~~~A~----~~--Gf~v----~~~~eA~~~--ADvV~ 103 (491)
T 3ulk_A 39 KVVIVGCGAQGLN-QGLNMRDSG--LDISYALRKEAIAEKRASWRKAT----EN--GFKV----GTYEELIPQ--ADLVI 103 (491)
T ss_dssp EEEEESCSHHHHH-HHHHHHHTT--CEEEEEECHHHHHTTCHHHHHHH----HT--TCEE----EEHHHHGGG--CSEEE
T ss_pred EEEEeCCChHhHH-HHhHHHhcC--CcEEEEeCCCCcccccchHHHHH----HC--CCEe----cCHHHHHHh--CCEEE
Confidence 7999999999975 888888865 4443 442111 01122222 22 4432 578999887 79999
Q ss_pred EecCCcccHHHHHH
Q 018445 79 VVLAGQAQVDTSLK 92 (355)
Q Consensus 79 I~tp~~~H~~~~~~ 92 (355)
+.+|+..|.++...
T Consensus 104 ~L~PD~~q~~vy~~ 117 (491)
T 3ulk_A 104 NLTPDKQHSDVVRT 117 (491)
T ss_dssp ECSCGGGHHHHHHH
T ss_pred EeCChhhHHHHHHH
Confidence 99999999887765
No 326
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=95.20 E-value=0.033 Score=51.84 Aligned_cols=74 Identities=16% Similarity=0.249 Sum_probs=46.4
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHH----Hhhhc-----------CCccccccCcchhhh
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEV----ARKHF-----------ADVECVWGDNGLEQI 68 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~----~~~~~-----------~~~~~~~~~~~~~el 68 (355)
||||||+|.||.. ....+.+.+ .+| -++|++++++....++ ..+.. ..+.. ++|++ .
T Consensus 56 kVaVIGaG~MG~~-IA~~la~aG--~~V-~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~---t~dl~-a 127 (460)
T 3k6j_A 56 SVAIIGGGTMGKA-MAICFGLAG--IET-FLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKI---TSDFH-K 127 (460)
T ss_dssp EEEEECCSHHHHH-HHHHHHHTT--CEE-EEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEE---ESCGG-G
T ss_pred EEEEECCCHHHHH-HHHHHHHCC--CeE-EEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEE---eCCHH-H
Confidence 8999999999986 666666654 566 5679999865432211 10110 01111 26775 3
Q ss_pred hcCCCccEEEEecCCcccH
Q 018445 69 IKEDSILGVAVVLAGQAQV 87 (355)
Q Consensus 69 l~~~~~D~V~I~tp~~~H~ 87 (355)
+++ .|+|+.++|.....
T Consensus 128 l~~--aDlVIeAVpe~~~v 144 (460)
T 3k6j_A 128 LSN--CDLIVESVIEDMKL 144 (460)
T ss_dssp CTT--CSEEEECCCSCHHH
T ss_pred Hcc--CCEEEEcCCCCHHH
Confidence 444 89999999987543
No 327
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.18 E-value=0.055 Score=48.15 Aligned_cols=90 Identities=12% Similarity=0.006 Sum_probs=57.8
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHH--HHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEe
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEE--SAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
.||.|||.|.+|.......|.+.+ .+| .++|..+. ..+.+.+ . ++....+ .+.+++.+ .++|.|+++
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G--~~V-~~~D~~~~~~~~~~L~~----~--gi~v~~g-~~~~~l~~-~~~d~vV~S 73 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAG--FEV-SGCDAKMYPPMSTQLEA----L--GIDVYEG-FDAAQLDE-FKADVYVIG 73 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTT--CEE-EEEESSCCTTHHHHHHH----T--TCEEEES-CCGGGGGS-CCCSEEEEC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCC--CEE-EEEcCCCCcHHHHHHHh----C--CCEEECC-CCHHHcCC-CCCCEEEEC
Confidence 489999999999743444555554 566 45687542 3333332 2 5544433 34555541 238988887
Q ss_pred cCCcccHHHHHHHHHcCCeEEEe
Q 018445 81 LAGQAQVDTSLKLLKAGKHVIQE 103 (355)
Q Consensus 81 tp~~~H~~~~~~al~~GkhVl~E 103 (355)
..-....+.+.+|.++|++|+.|
T Consensus 74 pgi~~~~p~~~~a~~~gi~v~~~ 96 (326)
T 3eag_A 74 NVAKRGMDVVEAILNLGLPYISG 96 (326)
T ss_dssp TTCCTTCHHHHHHHHTTCCEEEH
T ss_pred CCcCCCCHHHHHHHHcCCcEEeH
Confidence 65556667778889999999988
No 328
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=95.14 E-value=0.013 Score=52.46 Aligned_cols=64 Identities=11% Similarity=0.179 Sum_probs=44.8
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|+||+. ....+...+ .+|.+ +|+.+... ..+ . ++ .+ .+++|+|+. .|+|.+++|
T Consensus 142 ~tvGIiG~G~IG~~-va~~~~~fg--~~v~~-~d~~~~~~--~~~----~--~~--~~--~~l~ell~~--sDivslh~P 203 (334)
T 3kb6_A 142 LTLGVIGTGRIGSR-VAMYGLAFG--MKVLC-YDVVKRED--LKE----K--GC--VY--TSLDELLKE--SDVISLHVP 203 (334)
T ss_dssp SEEEEECCSHHHHH-HHHHHHHTT--CEEEE-ECSSCCHH--HHH----T--TC--EE--CCHHHHHHH--CSEEEECCC
T ss_pred cEEEEECcchHHHH-HHHhhcccC--ceeee-cCCccchh--hhh----c--Cc--ee--cCHHHHHhh--CCEEEEcCC
Confidence 37999999999986 666666665 67764 57654321 111 1 22 22 789999997 799999988
Q ss_pred Cc
Q 018445 83 GQ 84 (355)
Q Consensus 83 ~~ 84 (355)
-.
T Consensus 204 lt 205 (334)
T 3kb6_A 204 YT 205 (334)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 329
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=95.13 E-value=0.029 Score=49.80 Aligned_cols=76 Identities=14% Similarity=0.128 Sum_probs=42.2
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcC---CccccccCcchhhhhcCCCccEEE
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFA---DVECVWGDNGLEQIIKEDSILGVA 78 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ell~~~~~D~V~ 78 (355)
++||+|||+|.+|.. .+..+...+. +.=+.++|+++++++..+.......+ .+... .+++++ +++ .|+|+
T Consensus 7 ~~KI~IiGaG~vG~~-~a~~l~~~~~-~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~--~~~~~a-~~~--aDvVi 79 (318)
T 1y6j_A 7 RSKVAIIGAGFVGAS-AAFTMALRQT-ANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY--AGDYSD-VKD--CDVIV 79 (318)
T ss_dssp CCCEEEECCSHHHHH-HHHHHHHTTC-SSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC----CGGG-GTT--CSEEE
T ss_pred CCEEEEECCCHHHHH-HHHHHHhCCC-CCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE--ECCHHH-hCC--CCEEE
Confidence 479999999999975 4555554432 33346779998887654332212111 11111 145444 544 89999
Q ss_pred EecCCc
Q 018445 79 VVLAGQ 84 (355)
Q Consensus 79 I~tp~~ 84 (355)
|+.+..
T Consensus 80 i~~g~p 85 (318)
T 1y6j_A 80 VTAGAN 85 (318)
T ss_dssp ECCCC-
T ss_pred EcCCCC
Confidence 998764
No 330
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=95.11 E-value=0.05 Score=51.77 Aligned_cols=92 Identities=12% Similarity=0.074 Sum_probs=62.4
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCH-------------------HHHHHHHHHHhhhcCCccccccCc
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSE-------------------ESAKSAAEVARKHFADVECVWGDN 63 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~ 63 (355)
-||.|||+|..|.. .+..|...+ +.=+.++|.+. .+++.++++..+..|.+.......
T Consensus 33 ~~VlvvG~GGlGse-iak~La~aG--Vg~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~lNp~v~v~~~~~ 109 (531)
T 1tt5_A 33 AHVCLINATATGTE-ILKNLVLPG--IGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEE 109 (531)
T ss_dssp CEEEEECCSHHHHH-HHHHHHTTT--CSEEEEECCCBBCHHHHHHCTTCCGGGBTSBHHHHHHHHHHTTCTTSBCCEESS
T ss_pred CeEEEECcCHHHHH-HHHHHHHcC--CCeEEEEeCCEechhhcccCccCChhhcCcHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 48999999999986 788887654 44446778653 456667776667777765443223
Q ss_pred chh-------hhhcCCCccEEEEecCCc-ccHHHHHHHHHcCCe
Q 018445 64 GLE-------QIIKEDSILGVAVVLAGQ-AQVDTSLKLLKAGKH 99 (355)
Q Consensus 64 ~~~-------ell~~~~~D~V~I~tp~~-~H~~~~~~al~~Gkh 99 (355)
.++ +++. +.|+|+.|+-+. ....+...|.+.|++
T Consensus 110 ~~~~~~~~~~~~~~--~~DvVi~~~d~~~~r~~ln~~c~~~~ip 151 (531)
T 1tt5_A 110 SPENLLDNDPSFFC--RFTVVVATQLPESTSLRLADVLWNSQIP 151 (531)
T ss_dssp CHHHHHHSCGGGGG--GCSEEEEESCCHHHHHHHHHHHHHTTCC
T ss_pred CcchhhhhhHHHhc--CCCEEEEeCCCHHHHHHHHHHHHHcCCC
Confidence 343 3444 389999997664 455666677778876
No 331
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=95.09 E-value=0.033 Score=53.86 Aligned_cols=94 Identities=17% Similarity=0.166 Sum_probs=60.5
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCH-------------------HHHHHHHHHHhhhcCCccccccCc
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSE-------------------ESAKSAAEVARKHFADVECVWGDN 63 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~ 63 (355)
.||.|||+|..|.. .+..|.+.+ +.=+.|+|.+. .+++.+++.+++..|++.......
T Consensus 18 s~VlVVGaGGLGse-vak~La~aG--VG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~~~ 94 (640)
T 1y8q_B 18 GRVLVVGAGGIGCE-LLKNLVLTG--FSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYHD 94 (640)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHT--CCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEEES
T ss_pred CeEEEECcCHHHHH-HHHHHHHcC--CCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEEec
Confidence 48999999999986 788888765 33446667643 456666666666666664322111
Q ss_pred ch------hhhhcCCCccEEEEecCCc-ccHHHHHHHHHcCCeEE
Q 018445 64 GL------EQIIKEDSILGVAVVLAGQ-AQVDTSLKLLKAGKHVI 101 (355)
Q Consensus 64 ~~------~ell~~~~~D~V~I~tp~~-~H~~~~~~al~~GkhVl 101 (355)
.+ ++++.. +|+|+.|+.+. .+..+...|.+.|++++
T Consensus 95 ~i~~~~~~~~~~~~--~DlVvda~Dn~~aR~~ln~~c~~~~iPlI 137 (640)
T 1y8q_B 95 SIMNPDYNVEFFRQ--FILVMNALDNRAARNHVNRMCLAADVPLI 137 (640)
T ss_dssp CTTSTTSCHHHHTT--CSEEEECCSCHHHHHHHHHHHHHHTCCEE
T ss_pred ccchhhhhHhhhcC--CCEEEECCCCHHHHHHHHHHHHHcCCCEE
Confidence 11 345544 88888887663 45556667777776643
No 332
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.08 E-value=0.037 Score=48.94 Aligned_cols=77 Identities=17% Similarity=0.114 Sum_probs=50.7
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCC---HHHHHHHHHHHhhhcCCccc-cccCcc---hhhhhcCCCccE
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRS---EESAKSAAEVARKHFADVEC-VWGDNG---LEQIIKEDSILG 76 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~ell~~~~~D~ 76 (355)
++.|+|+|.+|+. .+..|.+.+ +.-+.|++|+ .++++++++.....++ ... ...+++ +.+.+.+ .|+
T Consensus 156 ~~lVlGaGG~g~a-ia~~L~~~G--a~~V~i~nR~~~~~~~a~~la~~~~~~~~-~~~~~~~~~~~~~l~~~l~~--aDi 229 (315)
T 3tnl_A 156 KMTICGAGGAATA-ICIQAALDG--VKEISIFNRKDDFYANAEKTVEKINSKTD-CKAQLFDIEDHEQLRKEIAE--SVI 229 (315)
T ss_dssp EEEEECCSHHHHH-HHHHHHHTT--CSEEEEEECSSTTHHHHHHHHHHHHHHSS-CEEEEEETTCHHHHHHHHHT--CSE
T ss_pred EEEEECCChHHHH-HHHHHHHCC--CCEEEEEECCCchHHHHHHHHHHhhhhcC-CceEEeccchHHHHHhhhcC--CCE
Confidence 7899999999875 677777654 5334778999 8999988875433321 111 111133 3344554 899
Q ss_pred EEEecCCccc
Q 018445 77 VAVVLAGQAQ 86 (355)
Q Consensus 77 V~I~tp~~~H 86 (355)
|+.+||-..+
T Consensus 230 IINaTp~Gm~ 239 (315)
T 3tnl_A 230 FTNATGVGMK 239 (315)
T ss_dssp EEECSSTTST
T ss_pred EEECccCCCC
Confidence 9999997765
No 333
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.07 E-value=0.043 Score=51.28 Aligned_cols=93 Identities=13% Similarity=0.086 Sum_probs=58.8
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
-||.|||+|..|.. ....|.+.+ .+|. ++|.++.......+.+++. ++...++ .+.++++++ ++|+|+++.-
T Consensus 10 k~v~viG~G~sG~s-~A~~l~~~G--~~V~-~~D~~~~~~~~~~~~L~~~--gi~~~~g-~~~~~~~~~-~~d~vv~spg 81 (451)
T 3lk7_A 10 KKVLVLGLARSGEA-AARLLAKLG--AIVT-VNDGKPFDENPTAQSLLEE--GIKVVCG-SHPLELLDE-DFCYMIKNPG 81 (451)
T ss_dssp CEEEEECCTTTHHH-HHHHHHHTT--CEEE-EEESSCGGGCHHHHHHHHT--TCEEEES-CCCGGGGGS-CEEEEEECTT
T ss_pred CEEEEEeeCHHHHH-HHHHHHhCC--CEEE-EEeCCcccCChHHHHHHhC--CCEEEEC-CChHHhhcC-CCCEEEECCc
Confidence 38999999999976 466666654 5664 5687542111111122223 5544433 234555552 3899998876
Q ss_pred CcccHHHHHHHHHcCCeEEEe
Q 018445 83 GQAQVDTSLKLLKAGKHVIQE 103 (355)
Q Consensus 83 ~~~H~~~~~~al~~GkhVl~E 103 (355)
-..+.+.+.+|.++|++|+.|
T Consensus 82 i~~~~p~~~~a~~~gi~v~~~ 102 (451)
T 3lk7_A 82 IPYNNPMVKKALEKQIPVLTE 102 (451)
T ss_dssp SCTTSHHHHHHHHTTCCEECH
T ss_pred CCCCChhHHHHHHCCCcEEeH
Confidence 666667788899999999876
No 334
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=95.07 E-value=0.022 Score=48.01 Aligned_cols=101 Identities=19% Similarity=0.174 Sum_probs=59.7
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccC-cchhhhhc--CCCccEEE
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGD-NGLEQIIK--EDSILGVA 78 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ell~--~~~~D~V~ 78 (355)
..+|.|+|+|.+|.. .+..|.+. +. + -++|+++++.+.+.. ++...++. ++.+.|-+ -.+.|+|+
T Consensus 9 ~~~viI~G~G~~G~~-la~~L~~~--g~-v-~vid~~~~~~~~~~~-------~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (234)
T 2aef_A 9 SRHVVICGWSESTLE-CLRELRGS--EV-F-VLAEDENVRKKVLRS-------GANFVHGDPTRVSDLEKANVRGARAVI 76 (234)
T ss_dssp -CEEEEESCCHHHHH-HHHHSTTS--EE-E-EEESCGGGHHHHHHT-------TCEEEESCTTCHHHHHHTTCTTCSEEE
T ss_pred CCEEEEECCChHHHH-HHHHHHhC--Ce-E-EEEECCHHHHHHHhc-------CCeEEEcCCCCHHHHHhcCcchhcEEE
Confidence 358999999999975 66666654 25 4 466999988776541 33333221 33343322 24689999
Q ss_pred EecCCcccHHHH-HHHHHcC--CeEEEecCCCCCHHHHHHHH
Q 018445 79 VVLAGQAQVDTS-LKLLKAG--KHVIQEKPAAANISEIENAL 117 (355)
Q Consensus 79 I~tp~~~H~~~~-~~al~~G--khVl~EKP~a~~~~e~~~l~ 117 (355)
++|+++.--..+ ..|-+.+ .+|++. +.+......+.
T Consensus 77 ~~~~~d~~n~~~~~~a~~~~~~~~iia~---~~~~~~~~~l~ 115 (234)
T 2aef_A 77 VDLESDSETIHCILGIRKIDESVRIIAE---AERYENIEQLR 115 (234)
T ss_dssp ECCSCHHHHHHHHHHHHHHCSSSEEEEE---CSSGGGHHHHH
T ss_pred EcCCCcHHHHHHHHHHHHHCCCCeEEEE---ECCHhHHHHHH
Confidence 999987443333 3333445 367665 44555544333
No 335
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=95.06 E-value=0.0067 Score=54.31 Aligned_cols=64 Identities=11% Similarity=0.172 Sum_probs=46.6
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||+. ....+...+ .+|+ ++|+++... + + .. ..+ .+++++++. .|+|++++|
T Consensus 146 ~~vgIiG~G~IG~~-~A~~l~~~G--~~V~-~~d~~~~~~--~-~-------~~-~~~--~~l~ell~~--aDvV~~~~P 206 (333)
T 1dxy_A 146 QTVGVMGTGHIGQV-AIKLFKGFG--AKVI-AYDPYPMKG--D-H-------PD-FDY--VSLEDLFKQ--SDVIDLHVP 206 (333)
T ss_dssp SEEEEECCSHHHHH-HHHHHHHTT--CEEE-EECSSCCSS--C-C-------TT-CEE--CCHHHHHHH--CSEEEECCC
T ss_pred CEEEEECcCHHHHH-HHHHHHHCC--CEEE-EECCCcchh--h-H-------hc-ccc--CCHHHHHhc--CCEEEEcCC
Confidence 48999999999986 777777665 6764 678876542 1 1 11 122 589999986 899999999
Q ss_pred Ccc
Q 018445 83 GQA 85 (355)
Q Consensus 83 ~~~ 85 (355)
...
T Consensus 207 ~~~ 209 (333)
T 1dxy_A 207 GIE 209 (333)
T ss_dssp CCG
T ss_pred Cch
Confidence 764
No 336
>1gr0_A Inositol-3-phosphate synthase; isomerase, oxidoreductase, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: NAD; 1.95A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3
Probab=95.02 E-value=0.069 Score=47.46 Aligned_cols=128 Identities=12% Similarity=0.054 Sum_probs=79.1
Q ss_pred CceEEEEecccccchhccchhhhc---------------------CCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccc
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEI---------------------SDLVSLKFIWSRSEESAKSAAEVARKHFADVECVW 60 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~---------------------~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~ 60 (355)
.+||||||.|+-|.. .+.++..+ +++++|++.+|.|+.+.-.....+.-..|+....+
T Consensus 15 ~~rVaIVGvGN~Gsa-Lv~Gi~~yk~~~~~~~~~Gl~~~~~g~~~~~Di~iVaafDId~~KVG~~l~~A~~~~~n~~~~~ 93 (367)
T 1gr0_A 15 EVRVAIVGVGNCASS-LVQGVEYYYNADDTSTVPGLMHVRFGPYHVRDVKFVAAFDVDAKKVGFDLSDAIFASENNTIKI 93 (367)
T ss_dssp CEEEEEECCSHHHHH-HHHHHHHTTTCCTTSCCTTCSCSEETTEEGGGEEEEEEEECBTTTTTSBHHHHTTSTTCCCCCC
T ss_pred CCCEEEECcChHHHH-HHHHHHHHhccCcccccCCccccccCCccCCCeEEEEEEcCChHHHHHHhhCCEecCCCchhhh
Confidence 469999999998875 55533322 23489999999999875432222111111210000
Q ss_pred --------------------------------cCcchhhhhcCCCccEEEEecCCccc---HHHHHHHHHcCCeEEEecC
Q 018445 61 --------------------------------GDNGLEQIIKEDSILGVAVVLAGQAQ---VDTSLKLLKAGKHVIQEKP 105 (355)
Q Consensus 61 --------------------------------~~~~~~ell~~~~~D~V~I~tp~~~H---~~~~~~al~~GkhVl~EKP 105 (355)
...|+.+.+++.++|+|+.-.|.... .-++.+|+++|.+..==-|
T Consensus 94 ~~v~~~~v~v~~g~~ldgia~~~~~~i~~s~~~~~Di~~~~~~~~~dVvV~~lp~gs~~aS~~YA~Aal~ag~~fvN~~P 173 (367)
T 1gr0_A 94 ADVAPTNVIVQRGPTLDGIGKYYADTIELSDAEPVDVVQALKEAKVDVLVSYLPVGSEEADKFYAQCAIDAGVAFVNALP 173 (367)
T ss_dssp SCCCCCCCBCEECCCTTSCCHHHHTTSCBCSSCCCCHHHHHHHTTCSEEEECCCTTCHHHHHHHHHHHHHHTCEEEECSS
T ss_pred hcccccCceEccCCCCCchhhhhhhccccccchhhHHHHHHHHhCCcEEEEeeeCCCcCHHHHHHHHHHHcCCceEecCC
Confidence 01367788888899966666665533 2345789999999888888
Q ss_pred CCCC-HHHHHHHHHHhhccCCCCCCCCeEEEEeccc
Q 018445 106 AAAN-ISEIENALSRYNSICPDPPGQPIWAVAENYR 140 (355)
Q Consensus 106 ~a~~-~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r 140 (355)
-..- ..+ +.++++++ |++ ..|-...
T Consensus 174 ~~~~~~P~---~~el~~~~------g~p-i~GdD~K 199 (367)
T 1gr0_A 174 VFIASDPV---WAKKFTDA------RVP-IVGDDIK 199 (367)
T ss_dssp CCSTTSHH---HHHHHHHH------TCE-EEESSBC
T ss_pred ccccCCHH---HHHHHHHc------CCC-Eeccccc
Confidence 6433 233 56777773 655 4676655
No 337
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.98 E-value=0.014 Score=48.47 Aligned_cols=72 Identities=17% Similarity=0.157 Sum_probs=46.3
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
.+||+|||+|.||.. ....|.+.+ .+|+ ++|++++ .+ .+.|+|++++
T Consensus 19 ~~~I~iiG~G~mG~~-la~~l~~~g--~~V~-~~~~~~~---------------------------~~--~~aD~vi~av 65 (209)
T 2raf_A 19 GMEITIFGKGNMGQA-IGHNFEIAG--HEVT-YYGSKDQ---------------------------AT--TLGEIVIMAV 65 (209)
T ss_dssp -CEEEEECCSHHHHH-HHHHHHHTT--CEEE-EECTTCC---------------------------CS--SCCSEEEECS
T ss_pred CCEEEEECCCHHHHH-HHHHHHHCC--CEEE-EEcCCHH---------------------------Hh--ccCCEEEEcC
Confidence 469999999999985 777777654 4654 5577654 11 3479999999
Q ss_pred CCcccHHHHHHH---HHcCCeEE-EecCCC
Q 018445 82 AGQAQVDTSLKL---LKAGKHVI-QEKPAA 107 (355)
Q Consensus 82 p~~~H~~~~~~a---l~~GkhVl-~EKP~a 107 (355)
|+....+++... ++ ++-|+ +-+++.
T Consensus 66 ~~~~~~~v~~~l~~~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 66 PYPALAALAKQYATQLK-GKIVVDITNPLN 94 (209)
T ss_dssp CHHHHHHHHHHTHHHHT-TSEEEECCCCBC
T ss_pred CcHHHHHHHHHHHHhcC-CCEEEEECCCCC
Confidence 966555555432 33 54333 345554
No 338
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=94.96 E-value=0.038 Score=50.88 Aligned_cols=63 Identities=17% Similarity=0.012 Sum_probs=45.5
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
+|+|||+|.+|+. ....++..+ .+| -++|+++.++..+.. . +.. + .++++++.. .|+|+.+++
T Consensus 249 TVgVIG~G~IGr~-vA~~lrafG--a~V-iv~d~dp~~a~~A~~----~--G~~--v--v~LeElL~~--ADIVv~atg 311 (464)
T 3n58_A 249 VAVVCGYGDVGKG-SAQSLAGAG--ARV-KVTEVDPICALQAAM----D--GFE--V--VTLDDAAST--ADIVVTTTG 311 (464)
T ss_dssp EEEEECCSHHHHH-HHHHHHHTT--CEE-EEECSSHHHHHHHHH----T--TCE--E--CCHHHHGGG--CSEEEECCS
T ss_pred EEEEECcCHHHHH-HHHHHHHCC--CEE-EEEeCCcchhhHHHh----c--Cce--e--ccHHHHHhh--CCEEEECCC
Confidence 7999999999986 677777665 565 467999887654432 1 332 1 578999986 788887654
No 339
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=94.96 E-value=0.037 Score=50.81 Aligned_cols=61 Identities=15% Similarity=0.170 Sum_probs=45.2
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEe
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
+|+|+|+|.+|+. ....++..+ .+| -++|+++.++..+.. . +.. + .++++++.. .|+|+.|
T Consensus 222 tV~ViG~G~IGk~-vA~~Lra~G--a~V-iv~D~dp~ra~~A~~----~--G~~--v--~~Leeal~~--ADIVi~a 282 (435)
T 3gvp_A 222 QVVVCGYGEVGKG-CCAALKAMG--SIV-YVTEIDPICALQACM----D--GFR--L--VKLNEVIRQ--VDIVITC 282 (435)
T ss_dssp EEEEECCSHHHHH-HHHHHHHTT--CEE-EEECSCHHHHHHHHH----T--TCE--E--CCHHHHTTT--CSEEEEC
T ss_pred EEEEEeeCHHHHH-HHHHHHHCC--CEE-EEEeCChhhhHHHHH----c--CCE--e--ccHHHHHhc--CCEEEEC
Confidence 7999999999986 677777665 565 568999987655433 1 322 1 679999986 7889886
No 340
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=94.93 E-value=0.0077 Score=55.29 Aligned_cols=64 Identities=13% Similarity=0.204 Sum_probs=44.6
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||.. ....+...+ .+|+ ++|+++.... . +.. . ..+++|+++. .|+|++++|
T Consensus 157 ktvGIIGlG~IG~~-vA~~l~~~G--~~V~-~yd~~~~~~~--------~--~~~-~--~~sl~ell~~--aDvV~lhvP 217 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQ-VGNLAESLG--MTVR-YYDTSDKLQY--------G--NVK-P--AASLDELLKT--SDVVSLHVP 217 (416)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CEEE-EECTTCCCCB--------T--TBE-E--CSSHHHHHHH--CSEEEECCC
T ss_pred CEEEEEeeCHHHHH-HHHHHHHCC--CEEE-EECCcchhcc--------c--CcE-e--cCCHHHHHhh--CCEEEEeCC
Confidence 48999999999986 677777764 6774 5687643210 0 221 2 2789999997 899999999
Q ss_pred Ccc
Q 018445 83 GQA 85 (355)
Q Consensus 83 ~~~ 85 (355)
...
T Consensus 218 lt~ 220 (416)
T 3k5p_A 218 SSK 220 (416)
T ss_dssp C--
T ss_pred CCH
Confidence 753
No 341
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=94.85 E-value=0.054 Score=48.47 Aligned_cols=74 Identities=14% Similarity=0.203 Sum_probs=46.2
Q ss_pred ceEEEEec-ccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHh-hhcCCccccccCcchhhhhcCCCccEEEEe
Q 018445 3 PRIAILGA-GIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVAR-KHFADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 3 ~rigiiG~-G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
+||+|||+ |.+|.. .+..+...+-.-+| .++|+++++++..+.... ..++.....+ ++++.+.+++ .|+|+|+
T Consensus 9 ~KV~ViGaaG~VG~~-~a~~l~~~g~~~ev-vLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t~d~~~al~d--ADvVvit 83 (343)
T 3fi9_A 9 EKLTIVGAAGMIGSN-MAQTAAMMRLTPNL-CLYDPFAVGLEGVAEEIRHCGFEGLNLTF-TSDIKEALTD--AKYIVSS 83 (343)
T ss_dssp SEEEEETTTSHHHHH-HHHHHHHTTCCSCE-EEECSCHHHHHHHHHHHHHHCCTTCCCEE-ESCHHHHHTT--EEEEEEC
T ss_pred CEEEEECCCChHHHH-HHHHHHhcCCCCEE-EEEeCCchhHHHHHHhhhhCcCCCCceEE-cCCHHHHhCC--CCEEEEc
Confidence 59999997 999975 55445443320134 678999988776433221 1233222222 2678787876 8999998
Q ss_pred c
Q 018445 81 L 81 (355)
Q Consensus 81 t 81 (355)
.
T Consensus 84 a 84 (343)
T 3fi9_A 84 G 84 (343)
T ss_dssp C
T ss_pred c
Confidence 4
No 342
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=94.81 E-value=0.069 Score=47.26 Aligned_cols=76 Identities=18% Similarity=0.116 Sum_probs=44.4
Q ss_pred ceEEEEec-ccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh-cC-CccccccCcchhhhhcCCCccEEEE
Q 018445 3 PRIAILGA-GIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH-FA-DVECVWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 3 ~rigiiG~-G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~ell~~~~~D~V~I 79 (355)
|||+|||+ |.+|.. .+..|...+- +.-+.++|+++ ++..+...... .+ .+....+++|+++.+++ .|+|++
T Consensus 1 mKI~IiGa~G~VG~~-la~~L~~~~~-~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~--aDvVvi 74 (314)
T 1mld_A 1 AKVAVLGASGGIGQP-LSLLLKNSPL-VSRLTLYDIAH--TPGVAADLSHIETRATVKGYLGPEQLPDCLKG--CDVVVI 74 (314)
T ss_dssp CEEEEETTTSTTHHH-HHHHHHTCTT-CSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEESGGGHHHHHTT--CSEEEE
T ss_pred CEEEEECCCChHHHH-HHHHHHhCCC-CcEEEEEeCCc--cHHHHHHHhccCcCceEEEecCCCCHHHHhCC--CCEEEE
Confidence 59999998 999985 5666665442 23357779987 22222211111 11 11111012578888876 899999
Q ss_pred ecCCc
Q 018445 80 VLAGQ 84 (355)
Q Consensus 80 ~tp~~ 84 (355)
+....
T Consensus 75 ~ag~~ 79 (314)
T 1mld_A 75 PAGVP 79 (314)
T ss_dssp CCSCC
T ss_pred CCCcC
Confidence 86543
No 343
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=94.79 E-value=0.0098 Score=53.17 Aligned_cols=64 Identities=8% Similarity=0.016 Sum_probs=46.2
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||+. ....+...+ .+|+ ++|+++++. + + + .+ .+ .+++++++. .|+|++++|
T Consensus 147 ~~vgIiG~G~IG~~-~A~~l~~~G--~~V~-~~d~~~~~~--~-~---~---~~--~~--~~l~ell~~--aDvV~~~~p 207 (331)
T 1xdw_A 147 CTVGVVGLGRIGRV-AAQIFHGMG--ATVI-GEDVFEIKG--I-E---D---YC--TQ--VSLDEVLEK--SDIITIHAP 207 (331)
T ss_dssp SEEEEECCSHHHHH-HHHHHHHTT--CEEE-EECSSCCCS--C-T---T---TC--EE--CCHHHHHHH--CSEEEECCC
T ss_pred CEEEEECcCHHHHH-HHHHHHHCC--CEEE-EECCCccHH--H-H---h---cc--cc--CCHHHHHhh--CCEEEEecC
Confidence 48999999999986 777777665 6764 578876543 1 1 1 11 22 689999986 899999998
Q ss_pred Ccc
Q 018445 83 GQA 85 (355)
Q Consensus 83 ~~~ 85 (355)
...
T Consensus 208 ~t~ 210 (331)
T 1xdw_A 208 YIK 210 (331)
T ss_dssp CCT
T ss_pred Cch
Confidence 753
No 344
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=94.79 E-value=0.092 Score=44.60 Aligned_cols=95 Identities=23% Similarity=0.106 Sum_probs=55.9
Q ss_pred ceEEEEecccccchhccchhhhc-CCeEEEEEEEeCCHHHHHHHHHHHhhhc-CC-ccccccCcchhhhhcCCCccEEEE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEI-SDLVSLKFIWSRSEESAKSAAEVARKHF-AD-VECVWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~-~~~~~vvai~d~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~ell~~~~~D~V~I 79 (355)
.+|.-+|||. |. +...+.+. .+..+++++ |.+++..+.+.+..+... ++ +... ..|+.+.+.+..+|+|+.
T Consensus 95 ~~vldiG~G~-G~--~~~~l~~~~~~~~~v~~~-D~~~~~~~~a~~~~~~~~~~~~v~~~--~~d~~~~~~~~~~D~v~~ 168 (255)
T 3mb5_A 95 DFIVEAGVGS-GA--LTLFLANIVGPEGRVVSY-EIREDFAKLAWENIKWAGFDDRVTIK--LKDIYEGIEEENVDHVIL 168 (255)
T ss_dssp CEEEEECCTT-SH--HHHHHHHHHCTTSEEEEE-CSCHHHHHHHHHHHHHHTCTTTEEEE--CSCGGGCCCCCSEEEEEE
T ss_pred CEEEEecCCc-hH--HHHHHHHHhCCCeEEEEE-ecCHHHHHHHHHHHHHcCCCCceEEE--ECchhhccCCCCcCEEEE
Confidence 3788999996 53 33334432 322577665 999999888877554442 22 2222 267777777778999998
Q ss_pred ecCCcc-cHHHHHHHHHcCCeEEEe
Q 018445 80 VLAGQA-QVDTSLKLLKAGKHVIQE 103 (355)
Q Consensus 80 ~tp~~~-H~~~~~~al~~GkhVl~E 103 (355)
..|... -.+.+..+|+.|-.+++.
T Consensus 169 ~~~~~~~~l~~~~~~L~~gG~l~~~ 193 (255)
T 3mb5_A 169 DLPQPERVVEHAAKALKPGGFFVAY 193 (255)
T ss_dssp CSSCGGGGHHHHHHHEEEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHcCCCCEEEEE
Confidence 655431 334444444444334333
No 345
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=94.76 E-value=0.043 Score=48.73 Aligned_cols=76 Identities=17% Similarity=0.090 Sum_probs=46.8
Q ss_pred CC-ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhc----CCccccccCcchhhhhcCCCcc
Q 018445 1 MA-PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHF----ADVECVWGDNGLEQIIKEDSIL 75 (355)
Q Consensus 1 m~-~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ell~~~~~D 75 (355)
|+ +||+|||+|.+|.. ....|...+- .+ +.++|+++++++..+....... ...... .+++++ .+++ .|
T Consensus 3 m~~~kI~iiGaG~vG~~-~a~~l~~~~~-~~-v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~-~t~d~~-a~~~--aD 75 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGT-LAHLALIKQL-GD-VVLFDIAQGMPNGKALDLLQTCPIEGVDFKVR-GTNDYK-DLEN--SD 75 (321)
T ss_dssp CCCCEEEEECCSHHHHH-HHHHHHHTTC-CE-EEEECSSSSHHHHHHHHHHTTHHHHTCCCCEE-EESCGG-GGTT--CS
T ss_pred CCCCEEEEECCCHHHHH-HHHHHHhCCC-ce-EEEEeCChHHHHHHHHHHHhhhhhcCCCcEEE-EcCCHH-HHCC--CC
Confidence 54 59999999999975 6666665443 25 4688999988765443332221 111111 125664 5554 79
Q ss_pred EEEEecCC
Q 018445 76 GVAVVLAG 83 (355)
Q Consensus 76 ~V~I~tp~ 83 (355)
+|+++.+.
T Consensus 76 vVIi~ag~ 83 (321)
T 3p7m_A 76 VVIVTAGV 83 (321)
T ss_dssp EEEECCSC
T ss_pred EEEEcCCc
Confidence 99999644
No 346
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=94.76 E-value=0.0092 Score=54.81 Aligned_cols=64 Identities=8% Similarity=0.131 Sum_probs=45.9
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|||||+|.||.. ....+...+ .+| .++|+++... . .++. . ..+++|+++. .|+|++++|
T Consensus 146 ktlGiIGlG~IG~~-vA~~l~~~G--~~V-~~~d~~~~~~---------~-~~~~-~--~~~l~ell~~--aDvV~l~~P 206 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQ-LGILAESLG--MYV-YFYDIENKLP---------L-GNAT-Q--VQHLSDLLNM--SDVVSLHVP 206 (404)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CEE-EEECSSCCCC---------C-TTCE-E--CSCHHHHHHH--CSEEEECCC
T ss_pred CEEEEEeECHHHHH-HHHHHHHCC--CEE-EEEcCCchhc---------c-CCce-e--cCCHHHHHhc--CCEEEEccC
Confidence 48999999999986 677777665 677 4568865431 1 0222 1 1689999987 799999999
Q ss_pred Ccc
Q 018445 83 GQA 85 (355)
Q Consensus 83 ~~~ 85 (355)
...
T Consensus 207 ~t~ 209 (404)
T 1sc6_A 207 ENP 209 (404)
T ss_dssp SST
T ss_pred CCh
Confidence 753
No 347
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=94.72 E-value=0.032 Score=50.85 Aligned_cols=73 Identities=10% Similarity=0.068 Sum_probs=48.3
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccc-cCcchhhhhcCCCccEEEEec
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVW-GDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ell~~~~~D~V~I~t 81 (355)
-+|+|||+|.+|.. .+..+...+ .+| -++|+++++++.+.+. ....+...+ ...++++++.. .|+|+.++
T Consensus 169 ~~V~ViG~G~iG~~-~a~~a~~~G--a~V-~~~d~~~~~l~~~~~~---~g~~~~~~~~~~~~l~~~l~~--aDvVi~~~ 239 (377)
T 2vhw_A 169 ADVVVIGAGTAGYN-AARIANGMG--ATV-TVLDINIDKLRQLDAE---FCGRIHTRYSSAYELEGAVKR--ADLVIGAV 239 (377)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CEE-EEEESCHHHHHHHHHH---TTTSSEEEECCHHHHHHHHHH--CSEEEECC
T ss_pred CEEEEECCCHHHHH-HHHHHHhCC--CEE-EEEeCCHHHHHHHHHh---cCCeeEeccCCHHHHHHHHcC--CCEEEECC
Confidence 48999999999985 677777665 565 5679999988776542 211111100 01467777764 89999987
Q ss_pred CCc
Q 018445 82 AGQ 84 (355)
Q Consensus 82 p~~ 84 (355)
+..
T Consensus 240 ~~p 242 (377)
T 2vhw_A 240 LVP 242 (377)
T ss_dssp CCT
T ss_pred CcC
Confidence 543
No 348
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=94.50 E-value=0.085 Score=44.49 Aligned_cols=72 Identities=18% Similarity=0.160 Sum_probs=44.9
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhc--CCccccccCcchhhhh-cCCCccEEEE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHF--ADVECVWGDNGLEQII-KEDSILGVAV 79 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ell-~~~~~D~V~I 79 (355)
.+|..+||| .|. ....+.+. . .+++++ |.+++..+.+.+...... +.+... ..|+.+.+ .+...|+|+.
T Consensus 93 ~~vldiG~G-~G~--~~~~l~~~-~-~~v~~v-D~~~~~~~~a~~~~~~~~~~~~~~~~--~~d~~~~~~~~~~~D~v~~ 164 (248)
T 2yvl_A 93 KRVLEFGTG-SGA--LLAVLSEV-A-GEVWTF-EAVEEFYKTAQKNLKKFNLGKNVKFF--NVDFKDAEVPEGIFHAAFV 164 (248)
T ss_dssp CEEEEECCT-TSH--HHHHHHHH-S-SEEEEE-CSCHHHHHHHHHHHHHTTCCTTEEEE--CSCTTTSCCCTTCBSEEEE
T ss_pred CEEEEeCCC-ccH--HHHHHHHh-C-CEEEEE-ecCHHHHHHHHHHHHHcCCCCcEEEE--EcChhhcccCCCcccEEEE
Confidence 379999999 464 33334433 3 466554 999999888776544332 222221 25666665 5567999998
Q ss_pred ecC
Q 018445 80 VLA 82 (355)
Q Consensus 80 ~tp 82 (355)
..|
T Consensus 165 ~~~ 167 (248)
T 2yvl_A 165 DVR 167 (248)
T ss_dssp CSS
T ss_pred CCc
Confidence 655
No 349
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=94.46 E-value=0.037 Score=51.92 Aligned_cols=63 Identities=13% Similarity=0.013 Sum_probs=46.2
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
.+|||||+|.+|+. ....+...+ .+| -++|+++.+...... . +.. + .++++++.+ .|+|++++
T Consensus 278 ktVgIIG~G~IG~~-vA~~l~~~G--~~V-~v~d~~~~~~~~a~~----~--G~~--~--~~l~ell~~--aDiVi~~~ 340 (494)
T 3d64_A 278 KIAVVAGYGDVGKG-CAQSLRGLG--ATV-WVTEIDPICALQAAM----E--GYR--V--VTMEYAADK--ADIFVTAT 340 (494)
T ss_dssp CEEEEECCSHHHHH-HHHHHHTTT--CEE-EEECSCHHHHHHHHT----T--TCE--E--CCHHHHTTT--CSEEEECS
T ss_pred CEEEEEccCHHHHH-HHHHHHHCC--CEE-EEEeCChHhHHHHHH----c--CCE--e--CCHHHHHhc--CCEEEECC
Confidence 48999999999986 777777664 676 567999887533221 1 332 2 589999986 89999986
No 350
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.46 E-value=0.049 Score=49.26 Aligned_cols=74 Identities=12% Similarity=0.139 Sum_probs=48.5
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccc-cCcchhhhhcCCCccEEEEec
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVW-GDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ell~~~~~D~V~I~t 81 (355)
-+|.|+|+|.+|.. .+..+...+ .+| -++|+++++++.+.+..... +.... ...++++.+. +.|+|+.++
T Consensus 168 ~~VlViGaGgvG~~-aa~~a~~~G--a~V-~v~dr~~~r~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~DvVI~~~ 238 (361)
T 1pjc_A 168 GKVVILGGGVVGTE-AAKMAVGLG--AQV-QIFDINVERLSYLETLFGSR---VELLYSNSAEIETAVA--EADLLIGAV 238 (361)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CEE-EEEESCHHHHHHHHHHHGGG---SEEEECCHHHHHHHHH--TCSEEEECC
T ss_pred CEEEEECCCHHHHH-HHHHHHhCC--CEE-EEEeCCHHHHHHHHHhhCce---eEeeeCCHHHHHHHHc--CCCEEEECC
Confidence 48999999999975 677777665 554 56799999998876532111 10110 0134555565 489999998
Q ss_pred CCcc
Q 018445 82 AGQA 85 (355)
Q Consensus 82 p~~~ 85 (355)
+...
T Consensus 239 ~~~~ 242 (361)
T 1pjc_A 239 LVPG 242 (361)
T ss_dssp CCTT
T ss_pred CcCC
Confidence 7643
No 351
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=94.44 E-value=0.046 Score=51.06 Aligned_cols=63 Identities=14% Similarity=0.072 Sum_probs=46.5
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
.+|||||+|.+|+. ....+...+ .+| -++|+++.+...+.. . ++. + .++++++.. .|+|++++
T Consensus 258 ktVgIIG~G~IG~~-vA~~l~~~G--~~V-iv~d~~~~~~~~a~~----~--g~~--~--~~l~ell~~--aDiVi~~~ 320 (479)
T 1v8b_A 258 KIVVICGYGDVGKG-CASSMKGLG--ARV-YITEIDPICAIQAVM----E--GFN--V--VTLDEIVDK--GDFFITCT 320 (479)
T ss_dssp SEEEEECCSHHHHH-HHHHHHHHT--CEE-EEECSCHHHHHHHHT----T--TCE--E--CCHHHHTTT--CSEEEECC
T ss_pred CEEEEEeeCHHHHH-HHHHHHhCc--CEE-EEEeCChhhHHHHHH----c--CCE--e--cCHHHHHhc--CCEEEECC
Confidence 48999999999986 777777764 676 567999987644332 1 332 2 689999986 89999985
No 352
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=94.27 E-value=0.046 Score=51.30 Aligned_cols=76 Identities=20% Similarity=0.201 Sum_probs=46.0
Q ss_pred ceEEEEecccccch-hccchhhh---cCCeEEEEEEEeCCHHHHHHHHHHHhh----hcCCccccccCcchhhhhcCCCc
Q 018445 3 PRIAILGAGIFVKT-QYIPRLAE---ISDLVSLKFIWSRSEESAKSAAEVARK----HFADVECVWGDNGLEQIIKEDSI 74 (355)
Q Consensus 3 ~rigiiG~G~~~~~-~~~~~l~~---~~~~~~vvai~d~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ell~~~~~ 74 (355)
|||+|||.|+.+.. ..+..+.. ++....=+.++|+++++++.....+++ ....+.. ..++|++|.|++ .
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~~~~~~~~~~~i-~~t~d~~eAl~g--A 77 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARKYVEELNSPVKV-VKTESLDEAIEG--A 77 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHHHHHHHTCCCEE-EEESCHHHHHTT--C
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHHHHHHcCCCeEE-EEeCCHHHHhCC--C
Confidence 79999999986521 12222332 221112247889999998775443222 2223322 224899999987 8
Q ss_pred cEEEEec
Q 018445 75 LGVAVVL 81 (355)
Q Consensus 75 D~V~I~t 81 (355)
|.|+++.
T Consensus 78 D~Vi~~~ 84 (477)
T 3u95_A 78 DFIINTA 84 (477)
T ss_dssp SEEEECC
T ss_pred CEEEECc
Confidence 8899885
No 353
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=94.26 E-value=0.08 Score=48.74 Aligned_cols=80 Identities=16% Similarity=0.219 Sum_probs=46.2
Q ss_pred CceEEEEecccccchhccchhhh-cCCe-EEEEEEEeCCHHHHHHHHHHHhhhc-CCccccccCcchhhhhcCCCccEEE
Q 018445 2 APRIAILGAGIFVKTQYIPRLAE-ISDL-VSLKFIWSRSEESAKSAAEVARKHF-ADVECVWGDNGLEQIIKEDSILGVA 78 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~-~~~~-~~vvai~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ell~~~~~D~V~ 78 (355)
.+||+|||+|+......+..|.. .++- ..=+.++|+++++++.......... ... ....++|+++.+++ .|+|+
T Consensus 2 ~~KI~IIGaG~v~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~~~~~~~~~~~~-~v~~t~d~~~al~~--AD~Vi 78 (417)
T 1up7_A 2 HMRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRF-KVLISDTFEGAVVD--AKYVI 78 (417)
T ss_dssp CCEEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSS-EEEECSSHHHHHTT--CSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHHHHHHHHhhCCe-EEEEeCCHHHHhCC--CCEEE
Confidence 47999999998421111122233 1221 2334788999999876443322111 112 22224788888887 89999
Q ss_pred EecCCc
Q 018445 79 VVLAGQ 84 (355)
Q Consensus 79 I~tp~~ 84 (355)
++....
T Consensus 79 itagvg 84 (417)
T 1up7_A 79 FQFRPG 84 (417)
T ss_dssp ECCCTT
T ss_pred EcCCCC
Confidence 998553
No 354
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=94.25 E-value=0.088 Score=46.30 Aligned_cols=75 Identities=11% Similarity=-0.013 Sum_probs=43.4
Q ss_pred ceEEEEe-cccccchhccchhhhcCCeEEEEEEEeC--CHHHHHHHHHHHhhh---cCCccccccCcchhhhhcCCCccE
Q 018445 3 PRIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWSR--SEESAKSAAEVARKH---FADVECVWGDNGLEQIIKEDSILG 76 (355)
Q Consensus 3 ~rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ell~~~~~D~ 76 (355)
|||+|+| +|++|.. .+..|...+. +.-+.++|+ ++++++..+...... ...+.... ++ .+.+++ .|+
T Consensus 1 mKI~IiGAaG~vG~~-l~~~L~~~~~-~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~--~~-~~a~~~--aDv 73 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAA-AGYNIALRDI-ADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ--GG-YEDTAG--SDV 73 (303)
T ss_dssp CEEEEETTTSHHHHH-HHHHHHHTTC-CSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE--CC-GGGGTT--CSE
T ss_pred CEEEEECCCChHHHH-HHHHHHhCCC-CCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe--CC-HHHhCC--CCE
Confidence 5999999 9999985 5555654332 222466799 887765433222121 11222111 34 344554 899
Q ss_pred EEEecCCc
Q 018445 77 VAVVLAGQ 84 (355)
Q Consensus 77 V~I~tp~~ 84 (355)
|+++....
T Consensus 74 Vi~~ag~~ 81 (303)
T 1o6z_A 74 VVITAGIP 81 (303)
T ss_dssp EEECCCCC
T ss_pred EEEcCCCC
Confidence 99997643
No 355
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=94.23 E-value=0.022 Score=51.44 Aligned_cols=94 Identities=15% Similarity=0.163 Sum_probs=60.5
Q ss_pred ceEEEEec-ccccchhccc-hhhhcCC-eEEEEEEEeCCHHHHHHHHHHHhhhcCCcccccc-CcchhhhhcCCCccEEE
Q 018445 3 PRIAILGA-GIFVKTQYIP-RLAEISD-LVSLKFIWSRSEESAKSAAEVARKHFADVECVWG-DNGLEQIIKEDSILGVA 78 (355)
Q Consensus 3 ~rigiiG~-G~~~~~~~~~-~l~~~~~-~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ell~~~~~D~V~ 78 (355)
|||||||+ |..|.. .++ .|.+++- .++++.+.+++ ..+.+.+ +.+....+. .++.++ + .++|+|+
T Consensus 1 ~~VaIvGATG~vG~e-llr~lL~~hp~~~~~l~~~ss~~--aG~~~~~-----~~~~~~~~~~~~~~~~-~--~~~Dvvf 69 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSV-LMQRMVEERDFDLIEPVFFSTSQ--IGVPAPN-----FGKDAGMLHDAFDIES-L--KQLDAVI 69 (370)
T ss_dssp CEEEEESCSSHHHHH-HHHHHHHTTGGGGSEEEEEESSS--TTSBCCC-----SSSCCCBCEETTCHHH-H--TTCSEEE
T ss_pred CEEEEECCCCHHHHH-HHHHHHhcCCCCceEEEEEeccc--cCcCHHH-----hCCCceEEEecCChhH-h--ccCCEEE
Confidence 69999995 556776 787 7777761 26888887764 2221110 111111110 012233 3 3599999
Q ss_pred EecCCcccHHHHHHHHHcCC-eEEEecCCC
Q 018445 79 VVLAGQAQVDTSLKLLKAGK-HVIQEKPAA 107 (355)
Q Consensus 79 I~tp~~~H~~~~~~al~~Gk-hVl~EKP~a 107 (355)
.|+|+..-.+++..++++|. -+++.-|-.
T Consensus 70 ~a~~~~~s~~~~~~~~~~G~k~~VID~ss~ 99 (370)
T 3pzr_A 70 TCQGGSYTEKVYPALRQAGWKGYWIDAAST 99 (370)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCCEEEECSST
T ss_pred ECCChHHHHHHHHHHHHCCCCEEEEeCCch
Confidence 99999999999999999996 577777653
No 356
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=94.19 E-value=0.12 Score=44.73 Aligned_cols=71 Identities=15% Similarity=0.094 Sum_probs=45.8
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEe
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
|.+||.|+|+|.+|.. .+..|.+.+ .+|+++ ++++.+.+.+.. . ++.... -|+.++- -.++|+|+.+
T Consensus 4 m~~~ilVtGaG~iG~~-l~~~L~~~g--~~V~~~-~r~~~~~~~~~~----~--~~~~~~--~D~~d~~-~~~~d~vi~~ 70 (286)
T 3ius_A 4 MTGTLLSFGHGYTARV-LSRALAPQG--WRIIGT-SRNPDQMEAIRA----S--GAEPLL--WPGEEPS-LDGVTHLLIS 70 (286)
T ss_dssp -CCEEEEETCCHHHHH-HHHHHGGGT--CEEEEE-ESCGGGHHHHHH----T--TEEEEE--SSSSCCC-CTTCCEEEEC
T ss_pred CcCcEEEECCcHHHHH-HHHHHHHCC--CEEEEE-EcChhhhhhHhh----C--CCeEEE--ecccccc-cCCCCEEEEC
Confidence 7789999999999985 778887764 577765 677777665543 1 222211 2333321 3569999988
Q ss_pred cCCc
Q 018445 81 LAGQ 84 (355)
Q Consensus 81 tp~~ 84 (355)
....
T Consensus 71 a~~~ 74 (286)
T 3ius_A 71 TAPD 74 (286)
T ss_dssp CCCB
T ss_pred CCcc
Confidence 7654
No 357
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=94.00 E-value=0.094 Score=46.22 Aligned_cols=75 Identities=20% Similarity=0.071 Sum_probs=44.8
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh----cCCccccccCcchhhhhcCCCccEEEE
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH----FADVECVWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ell~~~~~D~V~I 79 (355)
||+|||+|.+|.. .+..+...+ +.-+.++|+++++++..+...... ...... ..+++++ .+++ .|+|++
T Consensus 1 KI~IiGaG~vG~~-~a~~l~~~~--l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i-~~t~d~~-a~~~--aD~Vi~ 73 (308)
T 2d4a_B 1 MITILGAGKVGMA-TAVMLMMRG--YDDLLLIARTPGKPQGEALDLAHAAAELGVDIRI-SGSNSYE-DMRG--SDIVLV 73 (308)
T ss_dssp CEEEECCSHHHHH-HHHHHHHHT--CSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCE-EEESCGG-GGTT--CSEEEE
T ss_pred CEEEECcCHHHHH-HHHHHHhCC--CCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEE-EECCCHH-HhCC--CCEEEE
Confidence 7999999999975 444444332 222467799998887644332221 112211 1125674 4555 899999
Q ss_pred ecCCcc
Q 018445 80 VLAGQA 85 (355)
Q Consensus 80 ~tp~~~ 85 (355)
+.+...
T Consensus 74 ~ag~~~ 79 (308)
T 2d4a_B 74 TAGIGR 79 (308)
T ss_dssp CCSCCC
T ss_pred eCCCCC
Confidence 966544
No 358
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=94.00 E-value=0.24 Score=43.15 Aligned_cols=72 Identities=14% Similarity=0.030 Sum_probs=46.6
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhc-CCccccccCcchhhhhcCCCccEEEEec
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHF-ADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
.||..||||..+.. .-.+.+.++ .+|++| |.+++..+.+.+.+.+.. .++. +...|..++- +...|+|++..
T Consensus 124 ~rVLDIGcG~G~~t--a~~lA~~~g-a~V~gI-Dis~~~l~~Ar~~~~~~gl~~v~--~v~gDa~~l~-d~~FDvV~~~a 196 (298)
T 3fpf_A 124 ERAVFIGGGPLPLT--GILLSHVYG-MRVNVV-EIEPDIAELSRKVIEGLGVDGVN--VITGDETVID-GLEFDVLMVAA 196 (298)
T ss_dssp CEEEEECCCSSCHH--HHHHHHTTC-CEEEEE-ESSHHHHHHHHHHHHHHTCCSEE--EEESCGGGGG-GCCCSEEEECT
T ss_pred CEEEEECCCccHHH--HHHHHHccC-CEEEEE-ECCHHHHHHHHHHHHhcCCCCeE--EEECchhhCC-CCCcCEEEECC
Confidence 48999999975432 112334444 788887 999999988877654432 2232 2225666654 57799999854
No 359
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=93.99 E-value=0.042 Score=45.56 Aligned_cols=104 Identities=11% Similarity=0.105 Sum_probs=65.1
Q ss_pred ceEEEEe-cccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCcccccc-Cc----chhhhhcCCCccE
Q 018445 3 PRIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWG-DN----GLEQIIKEDSILG 76 (355)
Q Consensus 3 ~rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~ell~~~~~D~ 76 (355)
|||.|+| +|.+|.. .+..|.+.+ .+|+++ ++++++.+.. +++....+ .+ +++++++ ++|+
T Consensus 1 M~ilItGatG~iG~~-l~~~L~~~g--~~V~~~-~R~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~--~~d~ 66 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKS-LLKSLSTTD--YQIYAG-ARKVEQVPQY--------NNVKAVHFDVDWTPEEMAKQLH--GMDA 66 (219)
T ss_dssp CEEEEESTTSHHHHH-HHHHHTTSS--CEEEEE-ESSGGGSCCC--------TTEEEEECCTTSCHHHHHTTTT--TCSE
T ss_pred CeEEEECCCCHHHHH-HHHHHHHCC--CEEEEE-ECCccchhhc--------CCceEEEecccCCHHHHHHHHc--CCCE
Confidence 4899999 7889975 777777654 677665 6776654322 11111100 02 3445555 4999
Q ss_pred EEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccC
Q 018445 77 VAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRF 141 (355)
Q Consensus 77 V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~ 141 (355)
|+.+..... +..+..+..-...+++++++.+ .+.++.++...-+
T Consensus 67 vi~~ag~~~-----------------~~~~~~n~~~~~~l~~a~~~~~----~~~iv~~SS~~~~ 110 (219)
T 3dqp_A 67 IINVSGSGG-----------------KSLLKVDLYGAVKLMQAAEKAE----VKRFILLSTIFSL 110 (219)
T ss_dssp EEECCCCTT-----------------SSCCCCCCHHHHHHHHHHHHTT----CCEEEEECCTTTT
T ss_pred EEECCcCCC-----------------CCcEeEeHHHHHHHHHHHHHhC----CCEEEEECccccc
Confidence 998877654 3366778888999999998852 1345555554444
No 360
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=93.97 E-value=0.05 Score=53.92 Aligned_cols=76 Identities=12% Similarity=0.157 Sum_probs=47.2
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh----c-CCc----------cccccCcchhhh
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH----F-ADV----------ECVWGDNGLEQI 68 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~----~-~~~----------~~~~~~~~~~el 68 (355)
||||||+|.||.. ....+.+.+ .+| -++|++++.++...+..++. . .+. .....++|++ .
T Consensus 314 kV~VIGaG~MG~~-iA~~la~aG--~~V-~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~-~ 388 (725)
T 2wtb_A 314 KVAIIGGGLMGSG-IATALILSN--YPV-ILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYE-S 388 (725)
T ss_dssp CEEEECCSHHHHH-HHHHHHTTT--CCE-EEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSSG-G
T ss_pred EEEEEcCCHhhHH-HHHHHHhCC--CEE-EEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCHH-H
Confidence 7999999999985 666666554 455 56799999887653321110 0 010 0000125674 4
Q ss_pred hcCCCccEEEEecCCccc
Q 018445 69 IKEDSILGVAVVLAGQAQ 86 (355)
Q Consensus 69 l~~~~~D~V~I~tp~~~H 86 (355)
+++ .|+|++++|....
T Consensus 389 ~~~--aDlVIeaVpe~~~ 404 (725)
T 2wtb_A 389 FRD--VDMVIEAVIENIS 404 (725)
T ss_dssp GTT--CSEEEECCCSCHH
T ss_pred HCC--CCEEEEcCcCCHH
Confidence 544 8999999998864
No 361
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=93.96 E-value=0.0045 Score=55.33 Aligned_cols=86 Identities=16% Similarity=0.143 Sum_probs=53.2
Q ss_pred ceEEEEe-cccccchhccchhh--hcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEE
Q 018445 3 PRIAILG-AGIFVKTQYIPRLA--EISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 3 ~rigiiG-~G~~~~~~~~~~l~--~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I 79 (355)
|||||+| +|.+|+. .++.|. .++. ++++.+.++..+. +.+ .+.+....+...+.++ + ++|+|+-
T Consensus 1 mkVaI~GAtG~iG~~-llr~L~~~~~~~-~~l~~~~s~~~~g-~~l------~~~g~~i~v~~~~~~~-~---~~DvV~~ 67 (331)
T 2yv3_A 1 MRVAVVGATGAVGRE-ILKVLEARNFPL-SELRLYASPRSAG-VRL------AFRGEEIPVEPLPEGP-L---PVDLVLA 67 (331)
T ss_dssp CCEEEETTTSHHHHH-HHHHHHHTTCCC-SCCEEEECGGGSS-CEE------EETTEEEEEEECCSSC-C---CCSEEEE
T ss_pred CEEEEECCCCHHHHH-HHHHHHhCCCCc-EEEEEeeccccCC-CEE------EEcCceEEEEeCChhh-c---CCCEEEE
Confidence 6899999 9999986 777776 4554 5665554431110 000 0001111110012222 2 6999999
Q ss_pred ecCCcccHHHHHHHHHcCCeEE
Q 018445 80 VLAGQAQVDTSLKLLKAGKHVI 101 (355)
Q Consensus 80 ~tp~~~H~~~~~~al~~GkhVl 101 (355)
|+|.....+.+..++++|.-|+
T Consensus 68 a~g~~~s~~~a~~~~~~G~~vI 89 (331)
T 2yv3_A 68 SAGGGISRAKALVWAEGGALVV 89 (331)
T ss_dssp CSHHHHHHHHHHHHHHTTCEEE
T ss_pred CCCccchHHHHHHHHHCCCEEE
Confidence 9999999999999999997544
No 362
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=93.93 E-value=0.11 Score=46.50 Aligned_cols=84 Identities=15% Similarity=0.102 Sum_probs=54.2
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec-
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL- 81 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t- 81 (355)
-+|+|+|+|++|.. ....+...+ .+|+ ++|+++++ +.+++ ++ +. .+ .+.+++++ .+.|+++-|.
T Consensus 176 ktV~I~G~GnVG~~-~A~~l~~~G--akVv-vsD~~~~~-~~~a~---~~--ga--~~--v~~~ell~-~~~DIliP~A~ 240 (355)
T 1c1d_A 176 LTVLVQGLGAVGGS-LASLAAEAG--AQLL-VADTDTER-VAHAV---AL--GH--TA--VALEDVLS-TPCDVFAPCAM 240 (355)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CEEE-EECSCHHH-HHHHH---HT--TC--EE--CCGGGGGG-CCCSEEEECSC
T ss_pred CEEEEECcCHHHHH-HHHHHHHCC--CEEE-EEeCCccH-HHHHH---hc--CC--EE--eChHHhhc-CccceecHhHH
Confidence 38999999999985 566666664 7888 99999876 44433 23 32 22 46688887 3478887543
Q ss_pred CCcccHHHHHHHHHcCCeEEEec
Q 018445 82 AGQAQVDTSLKLLKAGKHVIQEK 104 (355)
Q Consensus 82 p~~~H~~~~~~al~~GkhVl~EK 104 (355)
.+....+.+.. + +..+++|=
T Consensus 241 ~~~I~~~~~~~-l--k~~iVie~ 260 (355)
T 1c1d_A 241 GGVITTEVART-L--DCSVVAGA 260 (355)
T ss_dssp SCCBCHHHHHH-C--CCSEECCS
T ss_pred HhhcCHHHHhh-C--CCCEEEEC
Confidence 22333444322 3 45788885
No 363
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=93.93 E-value=0.55 Score=38.37 Aligned_cols=71 Identities=7% Similarity=-0.108 Sum_probs=44.0
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhc-C-CccccccCcchhhhhc-CCCccEEEE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHF-A-DVECVWGDNGLEQIIK-EDSILGVAV 79 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~ell~-~~~~D~V~I 79 (355)
.+|.-||||. |. ..-.+.+. + .+|+++ |.+++..+.+.+..+... + ++... ..|..+.+. .+.+|+|++
T Consensus 57 ~~vLDlGcG~-G~--~~~~la~~-~-~~v~~v-D~s~~~~~~a~~~~~~~g~~~~v~~~--~~d~~~~~~~~~~~D~v~~ 128 (204)
T 3njr_A 57 ELLWDIGGGS-GS--VSVEWCLA-G-GRAITI-EPRADRIENIQKNIDTYGLSPRMRAV--QGTAPAALADLPLPEAVFI 128 (204)
T ss_dssp CEEEEETCTT-CH--HHHHHHHT-T-CEEEEE-ESCHHHHHHHHHHHHHTTCTTTEEEE--ESCTTGGGTTSCCCSEEEE
T ss_pred CEEEEecCCC-CH--HHHHHHHc-C-CEEEEE-eCCHHHHHHHHHHHHHcCCCCCEEEE--eCchhhhcccCCCCCEEEE
Confidence 3788999996 53 33344444 3 577765 999999888777554442 2 22222 256666443 357999986
Q ss_pred ec
Q 018445 80 VL 81 (355)
Q Consensus 80 ~t 81 (355)
..
T Consensus 129 ~~ 130 (204)
T 3njr_A 129 GG 130 (204)
T ss_dssp CS
T ss_pred CC
Confidence 53
No 364
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=93.91 E-value=0.59 Score=41.18 Aligned_cols=131 Identities=13% Similarity=0.019 Sum_probs=72.6
Q ss_pred CceEEEEecccccchhccchhhh-cCCeEEEEEEEeCCHHHHHHHHHHHhhh-cCCccccccCcchhhhhc---CCCccE
Q 018445 2 APRIAILGAGIFVKTQYIPRLAE-ISDLVSLKFIWSRSEESAKSAAEVARKH-FADVECVWGDNGLEQIIK---EDSILG 76 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~-~~~~~~vvai~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ell~---~~~~D~ 76 (355)
++||.+||||.-+ ....+.+ .++ ++++ ++|.+++-.+.+.+.+... .+.+... ..|..+.+. +...|+
T Consensus 90 ~~rVLdIG~G~G~---la~~la~~~p~-~~v~-~VEidp~vi~~Ar~~~~~~~~~rv~v~--~~Da~~~l~~~~~~~fDv 162 (317)
T 3gjy_A 90 KLRITHLGGGACT---MARYFADVYPQ-SRNT-VVELDAELARLSREWFDIPRAPRVKIR--VDDARMVAESFTPASRDV 162 (317)
T ss_dssp GCEEEEESCGGGH---HHHHHHHHSTT-CEEE-EEESCHHHHHHHHHHSCCCCTTTEEEE--ESCHHHHHHTCCTTCEEE
T ss_pred CCEEEEEECCcCH---HHHHHHHHCCC-cEEE-EEECCHHHHHHHHHhccccCCCceEEE--ECcHHHHHhhccCCCCCE
Confidence 3589999999633 3444544 565 6775 4699999888876633211 1233322 267777764 356999
Q ss_pred EEEecCCcccHHHHHHHHHcCCeEEEecCCC-CCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH-
Q 018445 77 VAVVLAGQAQVDTSLKLLKAGKHVIQEKPAA-ANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE- 154 (355)
Q Consensus 77 V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a-~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~- 154 (355)
|++-.+..... |.. .+.+=.+++.+.-+. .|+.+.-.......+.++.+.+.+++
T Consensus 163 Ii~D~~~~~~~-----------------~~~L~t~efl~~~~r~Lkp------gGvlv~~~~~~~~~~~~~~~~~tL~~v 219 (317)
T 3gjy_A 163 IIRDVFAGAIT-----------------PQNFTTVEFFEHCHRGLAP------GGLYVANCGDHSDLRGAKSELAGMMEV 219 (317)
T ss_dssp EEECCSTTSCC-----------------CGGGSBHHHHHHHHHHEEE------EEEEEEEEEECTTCHHHHHHHHHHHHH
T ss_pred EEECCCCcccc-----------------chhhhHHHHHHHHHHhcCC------CcEEEEEecCCcchHHHHHHHHHHHHH
Confidence 99854433210 111 122334444455555 35554444333333455666666666
Q ss_pred hCCeeEEE
Q 018445 155 IGDMMSVQ 162 (355)
Q Consensus 155 iG~i~~v~ 162 (355)
++.+..+.
T Consensus 220 F~~v~~~~ 227 (317)
T 3gjy_A 220 FEHVAVIA 227 (317)
T ss_dssp CSEEEEEE
T ss_pred CCceEEEE
Confidence 77665443
No 365
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=93.89 E-value=0.26 Score=38.87 Aligned_cols=73 Identities=12% Similarity=0.024 Sum_probs=43.6
Q ss_pred ceEEEEecccccchhccchhh-hcCCeEEEEEEEeCCHHHHHHHHHHHhhhc-C-CccccccCcchhhhhcC--CCccEE
Q 018445 3 PRIAILGAGIFVKTQYIPRLA-EISDLVSLKFIWSRSEESAKSAAEVARKHF-A-DVECVWGDNGLEQIIKE--DSILGV 77 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~-~~~~~~~vvai~d~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~ell~~--~~~D~V 77 (355)
.+|.-||||. |. +...+. ..+. .+++++ |.+++..+.+.+...+.. + .+ .. ..+..+.+.+ ..+|+|
T Consensus 27 ~~vldiG~G~-G~--~~~~l~~~~~~-~~v~~v-D~~~~~~~~a~~~~~~~~~~~~~-~~--~~d~~~~~~~~~~~~D~i 98 (178)
T 3hm2_A 27 ETLWDIGGGS-GS--IAIEWLRSTPQ-TTAVCF-EISEERRERILSNAINLGVSDRI-AV--QQGAPRAFDDVPDNPDVI 98 (178)
T ss_dssp EEEEEESTTT-TH--HHHHHHTTSSS-EEEEEE-CSCHHHHHHHHHHHHTTTCTTSE-EE--ECCTTGGGGGCCSCCSEE
T ss_pred CeEEEeCCCC-CH--HHHHHHHHCCC-CeEEEE-eCCHHHHHHHHHHHHHhCCCCCE-EE--ecchHhhhhccCCCCCEE
Confidence 3789999996 53 333333 3444 677654 999998888776554431 1 22 11 1444344444 679999
Q ss_pred EEecCC
Q 018445 78 AVVLAG 83 (355)
Q Consensus 78 ~I~tp~ 83 (355)
++..+.
T Consensus 99 ~~~~~~ 104 (178)
T 3hm2_A 99 FIGGGL 104 (178)
T ss_dssp EECC-T
T ss_pred EECCcc
Confidence 865443
No 366
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=93.71 E-value=0.049 Score=49.35 Aligned_cols=94 Identities=16% Similarity=0.116 Sum_probs=60.2
Q ss_pred CceEEEEeccc-ccchhccc-hhhhcCC-eEEEEEEEeCCHHHHHHHHHHHhhhcCCcccccc-CcchhhhhcCCCccEE
Q 018445 2 APRIAILGAGI-FVKTQYIP-RLAEISD-LVSLKFIWSRSEESAKSAAEVARKHFADVECVWG-DNGLEQIIKEDSILGV 77 (355)
Q Consensus 2 ~~rigiiG~G~-~~~~~~~~-~l~~~~~-~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ell~~~~~D~V 77 (355)
++||||||+-+ .|.. .++ .|.+++- .++++.+.+++.. +.+.+ +.+....+. .++.++ ++ ++|+|
T Consensus 4 ~~~VaIvGATG~vG~e-llr~lL~~hp~~~~~l~~~ss~~aG--~~~~~-----~~~~~~~v~~~~~~~~-~~--~vDvv 72 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSV-LMQRMQEEGDFDLIEPVFFSTSNAG--GKAPS-----FAKNETTLKDATSIDD-LK--KCDVI 72 (377)
T ss_dssp CCEEEEESTTSHHHHH-HHHHHHHTTGGGGSEEEEEESSCTT--SBCCT-----TCCSCCBCEETTCHHH-HH--TCSEE
T ss_pred CCEEEEECCCCHHHHH-HHHHHHhhCCCCceEEEEEechhcC--CCHHH-----cCCCceEEEeCCChhH-hc--CCCEE
Confidence 58999999554 5765 787 7777761 3788888765322 11111 111111110 012333 33 49999
Q ss_pred EEecCCcccHHHHHHHHHcCC-eEEEecCC
Q 018445 78 AVVLAGQAQVDTSLKLLKAGK-HVIQEKPA 106 (355)
Q Consensus 78 ~I~tp~~~H~~~~~~al~~Gk-hVl~EKP~ 106 (355)
+.|+|+..-.+++..++++|. -+++.-|-
T Consensus 73 f~a~~~~~s~~~~~~~~~~G~k~~VID~ss 102 (377)
T 3uw3_A 73 ITCQGGDYTNDVFPKLRAAGWNGYWIDAAS 102 (377)
T ss_dssp EECSCHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred EECCChHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 999999999999999999996 47777665
No 367
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=93.59 E-value=0.055 Score=53.59 Aligned_cols=74 Identities=15% Similarity=0.116 Sum_probs=47.8
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhc-----CC-------------ccccccCcc
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHF-----AD-------------VECVWGDNG 64 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~-----~~-------------~~~~~~~~~ 64 (355)
.||||||+|.||.. ....+.+.+ .+| -++|+++++++...+...+.. .+ +.. ++|
T Consensus 315 ~kV~VIGaG~MG~~-iA~~la~aG--~~V-~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~---~~d 387 (715)
T 1wdk_A 315 KQAAVLGAGIMGGG-IAYQSASKG--TPI-LMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRP---TLS 387 (715)
T ss_dssp SSEEEECCHHHHHH-HHHHHHHTT--CCE-EEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEE---ESS
T ss_pred CEEEEECCChhhHH-HHHHHHhCC--CEE-EEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEE---ECC
Confidence 38999999999985 666666654 455 478999998876422111000 01 111 256
Q ss_pred hhhhhcCCCccEEEEecCCccc
Q 018445 65 LEQIIKEDSILGVAVVLAGQAQ 86 (355)
Q Consensus 65 ~~ell~~~~~D~V~I~tp~~~H 86 (355)
+ +.+++ .|+|+.++|....
T Consensus 388 ~-~~~~~--aDlVIeaV~e~~~ 406 (715)
T 1wdk_A 388 Y-GDFGN--VDLVVEAVVENPK 406 (715)
T ss_dssp S-TTGGG--CSEEEECCCSCHH
T ss_pred H-HHHCC--CCEEEEcCCCCHH
Confidence 6 45554 8999999998864
No 368
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=93.56 E-value=0.1 Score=45.79 Aligned_cols=71 Identities=13% Similarity=0.131 Sum_probs=38.4
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
+||+|||+|.+|.. ....+...+- +.-+.++|++++......+......+.+.. ++|++ .+++ .|+|+++.
T Consensus 15 ~kV~ViGaG~vG~~-~a~~l~~~g~-~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~---t~d~~-~l~~--aD~Vi~aa 85 (303)
T 2i6t_A 15 NKITVVGGGELGIA-CTLAISAKGI-ADRLVLLDLSEGTKGATMDLEIFNLPNVEI---SKDLS-ASAH--SKVVIFTV 85 (303)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHTC-CSEEEEECCC-----CHHHHHHHTCTTEEE---ESCGG-GGTT--CSEEEECC
T ss_pred CEEEEECCCHHHHH-HHHHHHhcCC-CCEEEEEcCCcchHHHHHHHhhhcCCCeEE---eCCHH-HHCC--CCEEEEcC
Confidence 58999999998864 3434443322 333477899986222222222111223322 26784 4555 89999986
No 369
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=93.50 E-value=0.075 Score=54.39 Aligned_cols=33 Identities=12% Similarity=0.088 Sum_probs=25.0
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRS 38 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~ 38 (355)
-||.|||+|..|.. .+..|...+ +.=+.++|.+
T Consensus 28 s~VlIvG~GGlGse-iak~La~aG--Vg~itlvD~D 60 (1015)
T 3cmm_A 28 SNVLILGLKGLGVE-IAKNVVLAG--VKSMTVFDPE 60 (1015)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHC--CSEEEEECCS
T ss_pred CEEEEECCChHHHH-HHHHHHHcC--CCeEEEecCC
Confidence 48999999999986 788887654 4444667775
No 370
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=93.47 E-value=0.2 Score=43.12 Aligned_cols=75 Identities=16% Similarity=0.035 Sum_probs=45.6
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhc--CCccccccCcchhhhhcCCCccEEEEe
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHF--ADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
.+|.-+|||. |.. -+..+.......+++++ |.+++..+.+.+...... +.+... ..|+.+.+.+..+|+|++.
T Consensus 114 ~~VLDiG~G~-G~~-~~~la~~~~~~~~v~~v-D~s~~~~~~a~~~~~~~~~~~~v~~~--~~d~~~~~~~~~~D~V~~~ 188 (277)
T 1o54_A 114 DRIIDTGVGS-GAM-CAVLARAVGSSGKVFAY-EKREEFAKLAESNLTKWGLIERVTIK--VRDISEGFDEKDVDALFLD 188 (277)
T ss_dssp CEEEEECCTT-SHH-HHHHHHHTTTTCEEEEE-CCCHHHHHHHHHHHHHTTCGGGEEEE--CCCGGGCCSCCSEEEEEEC
T ss_pred CEEEEECCcC-CHH-HHHHHHHhCCCcEEEEE-ECCHHHHHHHHHHHHHcCCCCCEEEE--ECCHHHcccCCccCEEEEC
Confidence 3789999997 542 23333332322577654 999999888776544332 122222 2567777666679999885
Q ss_pred cC
Q 018445 81 LA 82 (355)
Q Consensus 81 tp 82 (355)
.|
T Consensus 189 ~~ 190 (277)
T 1o54_A 189 VP 190 (277)
T ss_dssp CS
T ss_pred Cc
Confidence 44
No 371
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=93.42 E-value=0.14 Score=45.79 Aligned_cols=90 Identities=13% Similarity=0.199 Sum_probs=57.5
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccC-cc----hhhhhcCCCccEEE
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGD-NG----LEQIIKEDSILGVA 78 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~ell~~~~~D~V~ 78 (355)
+|.|+|+|.+|.. .+..++..+. .+|+++ |+++++.+.+.+ . +....+.+ ++ +.++.....+|+|+
T Consensus 174 ~vlv~GaG~vG~~-a~qla~~~g~-~~Vi~~-~~~~~~~~~~~~----l--Ga~~~i~~~~~~~~~v~~~t~g~g~d~v~ 244 (345)
T 3jv7_A 174 TAVVIGVGGLGHV-GIQILRAVSA-ARVIAV-DLDDDRLALARE----V--GADAAVKSGAGAADAIRELTGGQGATAVF 244 (345)
T ss_dssp EEEEECCSHHHHH-HHHHHHHHCC-CEEEEE-ESCHHHHHHHHH----T--TCSEEEECSTTHHHHHHHHHGGGCEEEEE
T ss_pred EEEEECCCHHHHH-HHHHHHHcCC-CEEEEE-cCCHHHHHHHHH----c--CCCEEEcCCCcHHHHHHHHhCCCCCeEEE
Confidence 6899999999974 5665555544 577655 778888877654 3 22222111 12 22233334799999
Q ss_pred EecCCcccHHHHHHHHHcC-CeEEE
Q 018445 79 VVLAGQAQVDTSLKLLKAG-KHVIQ 102 (355)
Q Consensus 79 I~tp~~~H~~~~~~al~~G-khVl~ 102 (355)
-++......+.+..+++.| +-|++
T Consensus 245 d~~G~~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 245 DFVGAQSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp ESSCCHHHHHHHHHHEEEEEEEEEC
T ss_pred ECCCCHHHHHHHHHHHhcCCEEEEE
Confidence 9999887777777777765 44444
No 372
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.34 E-value=0.056 Score=49.00 Aligned_cols=73 Identities=10% Similarity=0.057 Sum_probs=47.2
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccc-cCcchhhhhcCCCccEEEEec
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVW-GDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ell~~~~~D~V~I~t 81 (355)
.+|+|+|+|.+|.. .+..+...+ .+| -++|+++++++.+.+. ....+.... ...++++++.. +|+|+.++
T Consensus 167 ~~V~ViGaG~iG~~-~a~~l~~~G--a~V-~~~d~~~~~~~~~~~~---~g~~~~~~~~~~~~l~~~~~~--~DvVi~~~ 237 (369)
T 2eez_A 167 ASVVILGGGTVGTN-AAKIALGMG--AQV-TILDVNHKRLQYLDDV---FGGRVITLTATEANIKKSVQH--ADLLIGAV 237 (369)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CEE-EEEESCHHHHHHHHHH---TTTSEEEEECCHHHHHHHHHH--CSEEEECC
T ss_pred CEEEEECCCHHHHH-HHHHHHhCC--CEE-EEEECCHHHHHHHHHh---cCceEEEecCCHHHHHHHHhC--CCEEEECC
Confidence 58999999999985 677776665 565 5679999988776542 211111100 01456777764 89999988
Q ss_pred CCc
Q 018445 82 AGQ 84 (355)
Q Consensus 82 p~~ 84 (355)
+..
T Consensus 238 g~~ 240 (369)
T 2eez_A 238 LVP 240 (369)
T ss_dssp C--
T ss_pred CCC
Confidence 754
No 373
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=93.28 E-value=0.17 Score=42.39 Aligned_cols=30 Identities=13% Similarity=0.241 Sum_probs=23.8
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEE
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFI 34 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai 34 (355)
.|||||||+|.||.. ....|.+.+ .+|+++
T Consensus 6 ~mkI~IIG~G~~G~s-LA~~L~~~G--~~V~~~ 35 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVN-MAEKLDSVG--HYVTVL 35 (232)
T ss_dssp CCEEEEECCSCCCSC-HHHHHHHTT--CEEEEC
T ss_pred CcEEEEEeeCHHHHH-HHHHHHHCC--CEEEEe
Confidence 479999999999985 778888764 577654
No 374
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=93.22 E-value=0.14 Score=47.28 Aligned_cols=88 Identities=15% Similarity=0.083 Sum_probs=55.6
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCH-------------------HHHHHHHHHHhhhcCCccccccCc
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSE-------------------ESAKSAAEVARKHFADVECVWGDN 63 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~ 63 (355)
-||.|||+|..|.. .+..|...+ +.=+.++|.+. .+++.+++..++..|.+.......
T Consensus 41 ~~VlvvG~GGlGs~-va~~La~aG--vg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~~ 117 (434)
T 1tt5_B 41 CKVLVIGAGGLGCE-LLKNLALSG--FRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFN 117 (434)
T ss_dssp CCEEEECSSTHHHH-HHHHHHHTT--CCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEES
T ss_pred CEEEEECcCHHHHH-HHHHHHHcC--CCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEec
Confidence 48999999999986 788887654 33335666532 467777777766667664322111
Q ss_pred c----hhhhhcCCCccEEEEecCCcc-cHHHHHHHHH
Q 018445 64 G----LEQIIKEDSILGVAVVLAGQA-QVDTSLKLLK 95 (355)
Q Consensus 64 ~----~~ell~~~~~D~V~I~tp~~~-H~~~~~~al~ 95 (355)
. -.++++. .|+|+.++.+.. +..+-..|.+
T Consensus 118 ~i~~~~~~~~~~--~DlVi~~~Dn~~~R~~in~~c~~ 152 (434)
T 1tt5_B 118 KIQDFNDTFYRQ--FHIIVCGLDSIIARRWINGMLIS 152 (434)
T ss_dssp CGGGBCHHHHTT--CSEEEECCSCHHHHHHHHHHHHH
T ss_pred ccchhhHHHhcC--CCEEEECCCCHHHHHHHHHHHHH
Confidence 1 1355654 899999988754 3333344444
No 375
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=93.22 E-value=0.13 Score=45.49 Aligned_cols=75 Identities=19% Similarity=0.074 Sum_probs=42.7
Q ss_pred ceEEEEec-ccccchhccchhhhcCCeEEEEEEEeC--CHHHHHHHHHHHhhh--c--CCccccccCc-chhhhhcCCCc
Q 018445 3 PRIAILGA-GIFVKTQYIPRLAEISDLVSLKFIWSR--SEESAKSAAEVARKH--F--ADVECVWGDN-GLEQIIKEDSI 74 (355)
Q Consensus 3 ~rigiiG~-G~~~~~~~~~~l~~~~~~~~vvai~d~--~~~~~~~~~~~~~~~--~--~~~~~~~~~~-~~~ell~~~~~ 74 (355)
|||.|+|+ |++|.. .+..|...+. +.-+.++|+ ++++++..+...... + ....... .+ ++.+.+++ .
T Consensus 1 mKI~V~GaaG~vG~~-l~~~L~~~~~-~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~-~~d~l~~al~g--a 75 (313)
T 1hye_A 1 MKVTIIGASGRVGSA-TALLLAKEPF-MKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYV-ESDENLRIIDE--S 75 (313)
T ss_dssp CEEEEETTTSHHHHH-HHHHHHTCTT-CCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEE-EETTCGGGGTT--C
T ss_pred CEEEEECCCChhHHH-HHHHHHhCCC-CCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEe-CCcchHHHhCC--C
Confidence 59999999 999985 6666665433 333467798 776655422211111 1 1111110 02 24566665 8
Q ss_pred cEEEEecC
Q 018445 75 LGVAVVLA 82 (355)
Q Consensus 75 D~V~I~tp 82 (355)
|+|+++.-
T Consensus 76 D~Vi~~Ag 83 (313)
T 1hye_A 76 DVVIITSG 83 (313)
T ss_dssp SEEEECCS
T ss_pred CEEEECCC
Confidence 99998854
No 376
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=93.14 E-value=0.22 Score=40.60 Aligned_cols=74 Identities=12% Similarity=0.009 Sum_probs=44.7
Q ss_pred ceEEEEecccccchhccchhh-hcCCeEEEEEEEeCCHHHHHHHHHHHhhhc-CCccccccCcchhhhhc-CCCccEEEE
Q 018445 3 PRIAILGAGIFVKTQYIPRLA-EISDLVSLKFIWSRSEESAKSAAEVARKHF-ADVECVWGDNGLEQIIK-EDSILGVAV 79 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~-~~~~~~~vvai~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ell~-~~~~D~V~I 79 (355)
.+|.-||||. |. ....+. ..+. .+++++ |.+++..+.+.+..+... +.+... ..|..+.+. .+.+|+|++
T Consensus 42 ~~vLDiG~G~-G~--~~~~la~~~~~-~~v~~v-D~s~~~~~~a~~~~~~~~~~~v~~~--~~d~~~~~~~~~~~D~i~~ 114 (204)
T 3e05_A 42 LVMWDIGAGS-AS--VSIEASNLMPN-GRIFAL-ERNPQYLGFIRDNLKKFVARNVTLV--EAFAPEGLDDLPDPDRVFI 114 (204)
T ss_dssp CEEEEETCTT-CH--HHHHHHHHCTT-SEEEEE-ECCHHHHHHHHHHHHHHTCTTEEEE--ECCTTTTCTTSCCCSEEEE
T ss_pred CEEEEECCCC-CH--HHHHHHHHCCC-CEEEEE-eCCHHHHHHHHHHHHHhCCCcEEEE--eCChhhhhhcCCCCCEEEE
Confidence 3789999996 54 233343 3333 577665 999999888877554432 223222 145544443 367999987
Q ss_pred ecCC
Q 018445 80 VLAG 83 (355)
Q Consensus 80 ~tp~ 83 (355)
..+.
T Consensus 115 ~~~~ 118 (204)
T 3e05_A 115 GGSG 118 (204)
T ss_dssp SCCT
T ss_pred CCCC
Confidence 7544
No 377
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=92.97 E-value=0.3 Score=42.67 Aligned_cols=73 Identities=16% Similarity=0.195 Sum_probs=43.1
Q ss_pred ceEEEEe-cccccchhccchhhhcCCeEEEEEEEeCC-----HHHHHHHHHHHhhhcCCcccccc-Cc---chhhhhcCC
Q 018445 3 PRIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWSRS-----EESAKSAAEVARKHFADVECVWG-DN---GLEQIIKED 72 (355)
Q Consensus 3 ~rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~ell~~~ 72 (355)
++|.|+| +|.+|.. .+..|.+.+ .+|+++ +|+ +++++.+.+. .. +++....+ .+ +++++++.
T Consensus 5 ~~ilVtGatG~iG~~-l~~~L~~~g--~~V~~~-~R~~~~~~~~~~~~~~~~-~~--~~~~~~~~D~~d~~~l~~~~~~- 76 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKR-IVNASISLG--HPTYVL-FRPEVVSNIDKVQMLLYF-KQ--LGAKLIEASLDDHQRLVDALKQ- 76 (313)
T ss_dssp CCEEEESTTSTTHHH-HHHHHHHTT--CCEEEE-CCSCCSSCHHHHHHHHHH-HT--TTCEEECCCSSCHHHHHHHHTT-
T ss_pred CEEEEEcCCcHHHHH-HHHHHHhCC--CcEEEE-ECCCcccchhHHHHHHHH-Hh--CCeEEEeCCCCCHHHHHHHHhC-
Confidence 6899999 5999975 778887654 567655 555 4555443321 01 12221111 12 45566664
Q ss_pred CccEEEEecCCc
Q 018445 73 SILGVAVVLAGQ 84 (355)
Q Consensus 73 ~~D~V~I~tp~~ 84 (355)
+|+|+.++...
T Consensus 77 -~d~vi~~a~~~ 87 (313)
T 1qyd_A 77 -VDVVISALAGG 87 (313)
T ss_dssp -CSEEEECCCCS
T ss_pred -CCEEEECCccc
Confidence 99999887654
No 378
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=92.89 E-value=0.11 Score=46.15 Aligned_cols=78 Identities=17% Similarity=0.100 Sum_probs=45.1
Q ss_pred CceEEEEec-ccccchhccchhhhcCC-----eEEEEEEEeCC----HHHHHHHHHHHhhh-cCCccccccCcchhhhhc
Q 018445 2 APRIAILGA-GIFVKTQYIPRLAEISD-----LVSLKFIWSRS----EESAKSAAEVARKH-FADVECVWGDNGLEQIIK 70 (355)
Q Consensus 2 ~~rigiiG~-G~~~~~~~~~~l~~~~~-----~~~vvai~d~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ell~ 70 (355)
++||+|+|+ |++|.. .+..|...+- ..+| .++|++ +++++..+...... .+-......++++.+.++
T Consensus 5 ~~KI~ViGaaG~VG~~-l~~~L~~~~~~~~~~~~ev-~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~ 82 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYS-LLFRIANGDMLGKDQPVIL-QLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFK 82 (329)
T ss_dssp CEEEEESSTTSHHHHH-HHHHHHTTTTTCTTCCEEE-EEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTT
T ss_pred CCEEEEECCCChHHHH-HHHHHHhCCCcCCCCCCEE-EEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhC
Confidence 589999997 999975 5665654321 0245 457998 66565433222111 111111111257777777
Q ss_pred CCCccEEEEecCC
Q 018445 71 EDSILGVAVVLAG 83 (355)
Q Consensus 71 ~~~~D~V~I~tp~ 83 (355)
+ .|+|+++...
T Consensus 83 ~--aD~Vi~~ag~ 93 (329)
T 1b8p_A 83 D--ADVALLVGAR 93 (329)
T ss_dssp T--CSEEEECCCC
T ss_pred C--CCEEEEeCCC
Confidence 6 8999988653
No 379
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=92.86 E-value=0.11 Score=45.82 Aligned_cols=77 Identities=12% Similarity=0.231 Sum_probs=47.8
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhc---------C-Ccc------ccccCcchhh
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHF---------A-DVE------CVWGDNGLEQ 67 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~---------~-~~~------~~~~~~~~~e 67 (355)
||+|||+|.||.. ....+...+ ++| -++|++++.++...+..++.. . ... ..-.++|++|
T Consensus 8 ~VaViGaG~MG~g-iA~~~a~~G--~~V-~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~ 83 (319)
T 3ado_A 8 DVLIVGSGLVGRS-WAMLFASGG--FRV-KLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAE 83 (319)
T ss_dssp EEEEECCSHHHHH-HHHHHHHTT--CCE-EEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHH
T ss_pred eEEEECCcHHHHH-HHHHHHhCC--CeE-EEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHh
Confidence 8999999999986 444444443 565 577999988766544322111 0 000 0001267777
Q ss_pred hhcCCCccEEEEecCCccc
Q 018445 68 IIKEDSILGVAVVLAGQAQ 86 (355)
Q Consensus 68 ll~~~~~D~V~I~tp~~~H 86 (355)
.+++ +|.|+=+.|...-
T Consensus 84 a~~~--ad~ViEav~E~l~ 100 (319)
T 3ado_A 84 AVEG--VVHIQECVPENLD 100 (319)
T ss_dssp HTTT--EEEEEECCCSCHH
T ss_pred Hhcc--CcEEeeccccHHH
Confidence 7776 8888888877644
No 380
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=92.82 E-value=0.2 Score=44.75 Aligned_cols=92 Identities=18% Similarity=0.135 Sum_probs=56.4
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcch-h---hhhcCCCccEEEE
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGL-E---QIIKEDSILGVAV 79 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---ell~~~~~D~V~I 79 (355)
+|.|+|+|.+|.. .+..++.... .+|+++ |+++++.+.+.+ ........|...++ + ++.....+|.++.
T Consensus 166 ~VlV~GaG~~g~~-a~~~a~~~~g-~~Vi~~-~~~~~r~~~~~~----~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~ 238 (348)
T 4eez_A 166 WQVIFGAGGLGNL-AIQYAKNVFG-AKVIAV-DINQDKLNLAKK----IGADVTINSGDVNPVDEIKKITGGLGVQSAIV 238 (348)
T ss_dssp EEEEECCSHHHHH-HHHHHHHTSC-CEEEEE-ESCHHHHHHHHH----TTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEE
T ss_pred EEEEEcCCCccHH-HHHHHHHhCC-CEEEEE-ECcHHHhhhhhh----cCCeEEEeCCCCCHHHHhhhhcCCCCceEEEE
Confidence 6899999999864 5665655554 688766 778888766544 32121111111232 2 2333456899999
Q ss_pred ecCCcccHHHHHHHHHcC-CeEEE
Q 018445 80 VLAGQAQVDTSLKLLKAG-KHVIQ 102 (355)
Q Consensus 80 ~tp~~~H~~~~~~al~~G-khVl~ 102 (355)
++........+..+++.| +-+++
T Consensus 239 ~~~~~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 239 CAVARIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp CCSCHHHHHHHHHTEEEEEEEEEC
T ss_pred eccCcchhheeheeecCCceEEEE
Confidence 988877777777766654 44444
No 381
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=92.78 E-value=0.052 Score=44.25 Aligned_cols=108 Identities=18% Similarity=0.200 Sum_probs=63.6
Q ss_pred CC-ceEEEEec-ccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCcccccc-C---cchhhhhcCCCc
Q 018445 1 MA-PRIAILGA-GIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWG-D---NGLEQIIKEDSI 74 (355)
Q Consensus 1 m~-~rigiiG~-G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~ell~~~~~ 74 (355)
|+ ++|.|+|. |.+|.. .++.|.+.+ .+|+++ ++++++.+... .+++....+ . ++++++++. +
T Consensus 1 M~~~~ilVtGatG~iG~~-l~~~l~~~g--~~V~~~-~r~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~--~ 68 (206)
T 1hdo_A 1 MAVKKIAIFGATGQTGLT-TLAQAVQAG--YEVTVL-VRDSSRLPSEG------PRPAHVVVGDVLQAADVDKTVAG--Q 68 (206)
T ss_dssp CCCCEEEEESTTSHHHHH-HHHHHHHTT--CEEEEE-ESCGGGSCSSS------CCCSEEEESCTTSHHHHHHHHTT--C
T ss_pred CCCCEEEEEcCCcHHHHH-HHHHHHHCC--CeEEEE-EeChhhccccc------CCceEEEEecCCCHHHHHHHHcC--C
Confidence 55 79999997 889975 777777654 577654 67766543210 112211110 0 245556654 8
Q ss_pred cEEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEeccc
Q 018445 75 LGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYR 140 (355)
Q Consensus 75 D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r 140 (355)
|+|+.+...... +.|...+......+++++++.+ .+..++++...-
T Consensus 69 d~vi~~a~~~~~----------------~~~~~~n~~~~~~~~~~~~~~~----~~~~v~~Ss~~~ 114 (206)
T 1hdo_A 69 DAVIVLLGTRND----------------LSPTTVMSEGARNIVAAMKAHG----VDKVVACTSAFL 114 (206)
T ss_dssp SEEEECCCCTTC----------------CSCCCHHHHHHHHHHHHHHHHT----CCEEEEECCGGG
T ss_pred CEEEECccCCCC----------------CCccchHHHHHHHHHHHHHHhC----CCeEEEEeeeee
Confidence 999988765432 2344456667788888888752 134555554433
No 382
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=92.77 E-value=0.52 Score=42.39 Aligned_cols=97 Identities=13% Similarity=0.110 Sum_probs=60.2
Q ss_pred eEEEEe-cccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccC-cchhhhhc---CCCccEEE
Q 018445 4 RIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGD-NGLEQIIK---EDSILGVA 78 (355)
Q Consensus 4 rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ell~---~~~~D~V~ 78 (355)
+|.|+| +|.+|.. .+..++...+ .+|+++ ++++++.+.+.+ . +....+.+ +++.+-+. ...+|+|+
T Consensus 174 ~VlV~Ga~G~vG~~-a~qlak~~~g-~~Vi~~-~~~~~~~~~~~~----l--Gad~vi~~~~~~~~~v~~~~~~g~Dvvi 244 (363)
T 4dvj_A 174 AILIVGGAGGVGSI-AVQIARQRTD-LTVIAT-ASRPETQEWVKS----L--GAHHVIDHSKPLAAEVAALGLGAPAFVF 244 (363)
T ss_dssp EEEEESTTSHHHHH-HHHHHHHHCC-SEEEEE-CSSHHHHHHHHH----T--TCSEEECTTSCHHHHHHTTCSCCEEEEE
T ss_pred EEEEECCCCHHHHH-HHHHHHHhcC-CEEEEE-eCCHHHHHHHHH----c--CCCEEEeCCCCHHHHHHHhcCCCceEEE
Confidence 588999 8999974 5555544344 677765 667777776644 3 22222211 22333222 24699999
Q ss_pred EecCCcccHHHHHHHHHcC-CeEEEecCCCCC
Q 018445 79 VVLAGQAQVDTSLKLLKAG-KHVIQEKPAAAN 109 (355)
Q Consensus 79 I~tp~~~H~~~~~~al~~G-khVl~EKP~a~~ 109 (355)
-++......+.+..+++.| +-|++..|...+
T Consensus 245 d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~ 276 (363)
T 4dvj_A 245 STTHTDKHAAEIADLIAPQGRFCLIDDPSAFD 276 (363)
T ss_dssp ECSCHHHHHHHHHHHSCTTCEEEECSCCSSCC
T ss_pred ECCCchhhHHHHHHHhcCCCEEEEECCCCccc
Confidence 9998776777777777665 566776665444
No 383
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=92.64 E-value=0.64 Score=38.25 Aligned_cols=101 Identities=17% Similarity=0.118 Sum_probs=60.0
Q ss_pred ce-EEEEe-cccccchhccchhh-hcCCeEEEEEEEeCCHH-HHHHHHHHHhhhcCCcccccc-C---cchhhhhcCCCc
Q 018445 3 PR-IAILG-AGIFVKTQYIPRLA-EISDLVSLKFIWSRSEE-SAKSAAEVARKHFADVECVWG-D---NGLEQIIKEDSI 74 (355)
Q Consensus 3 ~r-igiiG-~G~~~~~~~~~~l~-~~~~~~~vvai~d~~~~-~~~~~~~~~~~~~~~~~~~~~-~---~~~~ell~~~~~ 74 (355)
|| |.|+| +|.+|.. .+..|. +. + .+|++ .+++++ +++.+.+ ..+++....+ . ++++++++ ++
T Consensus 5 mk~vlVtGasg~iG~~-~~~~l~~~~-g-~~V~~-~~r~~~~~~~~~~~----~~~~~~~~~~D~~d~~~~~~~~~--~~ 74 (221)
T 3r6d_A 5 YXYITILGAAGQIAQX-LTATLLTYT-D-MHITL-YGRQLKTRIPPEII----DHERVTVIEGSFQNPGXLEQAVT--NA 74 (221)
T ss_dssp CSEEEEESTTSHHHHH-HHHHHHHHC-C-CEEEE-EESSHHHHSCHHHH----TSTTEEEEECCTTCHHHHHHHHT--TC
T ss_pred EEEEEEEeCCcHHHHH-HHHHHHhcC-C-ceEEE-EecCccccchhhcc----CCCceEEEECCCCCHHHHHHHHc--CC
Confidence 45 99999 5889975 677777 44 3 67755 578887 6665532 1112211110 1 34555665 48
Q ss_pred cEEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCc
Q 018445 75 LGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFE 142 (355)
Q Consensus 75 D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~ 142 (355)
|+|+.+.... ++. ++.+++.+++.+ .+.++.++...-|.
T Consensus 75 d~vv~~ag~~------------------------n~~-~~~~~~~~~~~~----~~~iv~iSs~~~~~ 113 (221)
T 3r6d_A 75 EVVFVGAMES------------------------GSD-MASIVKALSRXN----IRRVIGVSMAGLSG 113 (221)
T ss_dssp SEEEESCCCC------------------------HHH-HHHHHHHHHHTT----CCEEEEEEETTTTS
T ss_pred CEEEEcCCCC------------------------Chh-HHHHHHHHHhcC----CCeEEEEeeceecC
Confidence 9999887653 222 777788777742 24566666555443
No 384
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.49 E-value=0.18 Score=42.02 Aligned_cols=129 Identities=11% Similarity=0.116 Sum_probs=68.1
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCH-HHHHHHHHHHhhhcCCccccccCcchh-hhhcCCCccEEEEe
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSE-ESAKSAAEVARKHFADVECVWGDNGLE-QIIKEDSILGVAVV 80 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-ell~~~~~D~V~I~ 80 (355)
.+|.|||.|.+|.. -+..|.+.+ .+|+-| +++. +..+.+++ .. ++... ...++ +.|+ ++|+|+.+
T Consensus 32 k~VLVVGgG~va~~-ka~~Ll~~G--A~VtVv-ap~~~~~l~~l~~---~~--~i~~i--~~~~~~~dL~--~adLVIaA 98 (223)
T 3dfz_A 32 RSVLVVGGGTIATR-RIKGFLQEG--AAITVV-APTVSAEINEWEA---KG--QLRVK--RKKVGEEDLL--NVFFIVVA 98 (223)
T ss_dssp CCEEEECCSHHHHH-HHHHHGGGC--CCEEEE-CSSCCHHHHHHHH---TT--SCEEE--CSCCCGGGSS--SCSEEEEC
T ss_pred CEEEEECCCHHHHH-HHHHHHHCC--CEEEEE-CCCCCHHHHHHHH---cC--CcEEE--ECCCCHhHhC--CCCEEEEC
Confidence 48999999999986 577777665 455433 3432 33444443 22 22211 12222 2344 48999999
Q ss_pred cCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHH-HHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH
Q 018445 81 LAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENA-LSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE 154 (355)
Q Consensus 81 tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l-~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~ 154 (355)
|.+..--..+.++.++|+.|-+ +.+++.+.=+ -+..++ .++.+.|..+-.---..+.+|+.|.+
T Consensus 99 T~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv~r------g~l~iaIST~G~sP~la~~iR~~ie~ 163 (223)
T 3dfz_A 99 TNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQFSR------GRLSLAISTDGASPLLTKRIKEDLSS 163 (223)
T ss_dssp CCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEE------TTEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEEEe------CCEEEEEECCCCCcHHHHHHHHHHHH
Confidence 9887665566555555654322 1222211111 122333 36666666655544455677777764
No 385
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.42 E-value=0.39 Score=42.38 Aligned_cols=73 Identities=16% Similarity=0.151 Sum_probs=41.7
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCC--HHHHHHHHHHHhhhc----CCccccccCcchhhhhcCCCccE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRS--EESAKSAAEVARKHF----ADVECVWGDNGLEQIIKEDSILG 76 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ell~~~~~D~ 76 (355)
.||+|||+|.+|.. ....+...+- -+| .++|++ +++++..+....... ...... .++++++ +++ .|+
T Consensus 9 ~kv~ViGaG~vG~~-ia~~l~~~g~-~~v-~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~-~t~d~~a-~~~--aDv 81 (315)
T 3tl2_A 9 KKVSVIGAGFTGAT-TAFLLAQKEL-ADV-VLVDIPQLENPTKGKALDMLEASPVQGFDANII-GTSDYAD-TAD--SDV 81 (315)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTC-CEE-EEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEE-EESCGGG-GTT--CSE
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCC-CeE-EEEeccchHHHHHHhhhhHHHhhhhccCCCEEE-EcCCHHH-hCC--CCE
Confidence 38999999999975 5666655432 144 678998 555554432211111 011111 1245654 443 899
Q ss_pred EEEecC
Q 018445 77 VAVVLA 82 (355)
Q Consensus 77 V~I~tp 82 (355)
|+++..
T Consensus 82 VIiaag 87 (315)
T 3tl2_A 82 VVITAG 87 (315)
T ss_dssp EEECCS
T ss_pred EEEeCC
Confidence 999964
No 386
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=92.28 E-value=0.29 Score=41.38 Aligned_cols=75 Identities=20% Similarity=0.124 Sum_probs=46.5
Q ss_pred ceEEEEecccccchhccchhhhc-CCeEEEEEEEeCCHHHHHHHHHHHhhh-c-CCccccccCcchhhh-hcCCCccEEE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEI-SDLVSLKFIWSRSEESAKSAAEVARKH-F-ADVECVWGDNGLEQI-IKEDSILGVA 78 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~-~~~~~vvai~d~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~el-l~~~~~D~V~ 78 (355)
.+|.-+|||. |. +...+.+. ....+++++ |.+++..+.+.+..+.. . +.+... ..|..+. +.+...|+|+
T Consensus 98 ~~vLdiG~G~-G~--~~~~l~~~~~~~~~v~~~-D~~~~~~~~a~~~~~~~~g~~~v~~~--~~d~~~~~~~~~~~D~v~ 171 (258)
T 2pwy_A 98 MRVLEAGTGS-GG--LTLFLARAVGEKGLVESY-EARPHHLAQAERNVRAFWQVENVRFH--LGKLEEAELEEAAYDGVA 171 (258)
T ss_dssp CEEEEECCTT-SH--HHHHHHHHHCTTSEEEEE-ESCHHHHHHHHHHHHHHCCCCCEEEE--ESCGGGCCCCTTCEEEEE
T ss_pred CEEEEECCCc-CH--HHHHHHHHhCCCCEEEEE-eCCHHHHHHHHHHHHHhcCCCCEEEE--ECchhhcCCCCCCcCEEE
Confidence 3789999996 54 33344433 322577655 99999988887754333 2 233222 2567776 6666799999
Q ss_pred EecCC
Q 018445 79 VVLAG 83 (355)
Q Consensus 79 I~tp~ 83 (355)
+..|.
T Consensus 172 ~~~~~ 176 (258)
T 2pwy_A 172 LDLME 176 (258)
T ss_dssp EESSC
T ss_pred ECCcC
Confidence 86553
No 387
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=92.16 E-value=0.2 Score=44.56 Aligned_cols=99 Identities=18% Similarity=0.164 Sum_probs=60.1
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccC-cchhhhhc--CCCccEEEE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGD-NGLEQIIK--EDSILGVAV 79 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ell~--~~~~D~V~I 79 (355)
.+|.|+|+|..|.. .+..|.+.+ . +-+.|+++++.+ +.+ . +....++. ++.+.|.+ -.+.|+|++
T Consensus 116 ~~viI~G~G~~g~~-l~~~L~~~g--~--v~vid~~~~~~~-~~~----~--~~~~i~gd~~~~~~L~~a~i~~a~~vi~ 183 (336)
T 1lnq_A 116 RHVVICGWSESTLE-CLRELRGSE--V--FVLAEDENVRKK-VLR----S--GANFVHGDPTRVSDLEKANVRGARAVIV 183 (336)
T ss_dssp CEEEEESCCHHHHH-HHTTGGGSC--E--EEEESCGGGHHH-HHH----T--TCEEEESCTTSHHHHHHTCSTTEEEEEE
T ss_pred CCEEEECCcHHHHH-HHHHHHhCC--c--EEEEeCChhhhh-HHh----C--CcEEEEeCCCCHHHHHhcChhhccEEEE
Confidence 37999999999975 677776643 5 455699999988 543 1 33333332 34444432 256999999
Q ss_pred ecCCcccHHHHHHHH-HcC--CeEEEecCCCCCHHHHHHH
Q 018445 80 VLAGQAQVDTSLKLL-KAG--KHVIQEKPAAANISEIENA 116 (355)
Q Consensus 80 ~tp~~~H~~~~~~al-~~G--khVl~EKP~a~~~~e~~~l 116 (355)
+++++..--.+...+ +.+ .+|++. +.+.+..+.+
T Consensus 184 ~~~~d~~n~~~~~~ar~~~~~~~iiar---~~~~~~~~~l 220 (336)
T 1lnq_A 184 DLESDSETIHCILGIRKIDESVRIIAE---AERYENIEQL 220 (336)
T ss_dssp CCSSHHHHHHHHHHHHTTCTTSEEEEE---CSSGGGHHHH
T ss_pred cCCccHHHHHHHHHHHHHCCCCeEEEE---ECCHHHHHHH
Confidence 999874433333333 334 366665 3555555444
No 388
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=91.95 E-value=0.26 Score=40.90 Aligned_cols=83 Identities=17% Similarity=0.168 Sum_probs=52.8
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecCC
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLAG 83 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp~ 83 (355)
|+.|+|+|..|+. .++.|.+ .+ ++++++.|.++.... ..+.+..-..++++++.+. .++.++++.|+
T Consensus 14 ~v~IiGAGg~g~~-v~~~l~~-~~-~~~vgfiDd~~~~~~---------~~g~~Vlg~~~~~~~~~~~-~~~~v~iAIg~ 80 (220)
T 4ea9_A 14 GVVIIGGGGHAKV-VIESLRA-CG-ETVAAIVDADPTRRA---------VLGVPVVGDDLALPMLREQ-GLSRLFVAIGD 80 (220)
T ss_dssp CEEEECCSHHHHH-HHHHHHH-TT-CCEEEEECSCC---C---------BTTBCEEESGGGHHHHHHT-TCCEEEECCCC
T ss_pred CEEEEcCCHHHHH-HHHHHHh-CC-CEEEEEEeCCcccCc---------CCCeeEECCHHHHHHhhcc-cccEEEEecCC
Confidence 7999999999986 6777776 34 899999998765421 1144322111345666654 37778888886
Q ss_pred c-ccHHHHHHHHHcCCe
Q 018445 84 Q-AQVDTSLKLLKAGKH 99 (355)
Q Consensus 84 ~-~H~~~~~~al~~Gkh 99 (355)
. .+.++...+.+.|..
T Consensus 81 ~~~R~~i~~~l~~~g~~ 97 (220)
T 4ea9_A 81 NRLRQKLGRKARDHGFS 97 (220)
T ss_dssp HHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHhcCCC
Confidence 3 445555666666643
No 389
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=91.89 E-value=0.034 Score=51.23 Aligned_cols=81 Identities=10% Similarity=-0.027 Sum_probs=53.7
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
-+|.|+|+|..|+. .+..+.+. + ++++|++|.++.+.. ....+++. ++.+++.++ ...+++.|+|+.
T Consensus 53 ~~v~IiGAG~~G~~-l~~~l~~~-g-~~ivgfiDdd~~~~g-------~~i~GipV-~~~~~l~~~-~~~~~~~viiai- 119 (409)
T 2py6_A 53 TRLVILGTKGFGAH-LMNVRHER-P-CEVIAAVDDFRYHSG-------ELYYGLPI-ISTDRFTEL-ATHDRDLVALNT- 119 (409)
T ss_dssp CEEEEECSSSTHHH-HHSCSSSC-S-SEEEEEECTTTTTSC-------CEETTEEE-ECHHHHHHH-HHTCTTEEEEEC-
T ss_pred CeEEEEeCCHHHHH-HHHHHHHC-C-CEEEEEEeCCccccc-------CEECCEEE-ECHHHHHHH-HhCCCCEEEEec-
Confidence 47999999999985 67766553 3 899999998765421 11224443 222233333 456688889888
Q ss_pred CcccHHHHHHHHHcC
Q 018445 83 GQAQVDTSLKLLKAG 97 (355)
Q Consensus 83 ~~~H~~~~~~al~~G 97 (355)
....+++..+.+.|
T Consensus 120 -~~r~~i~~~l~~~g 133 (409)
T 2py6_A 120 -CRYDGPKRFFDQIC 133 (409)
T ss_dssp -CCSHHHHHHHHHHH
T ss_pred -cHHHHHHHHHHhcC
Confidence 46677887777766
No 390
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=91.83 E-value=0.53 Score=41.22 Aligned_cols=88 Identities=19% Similarity=0.171 Sum_probs=50.4
Q ss_pred CCceEEEEec-ccccchhccchhhhcCCeEEEEEEEeCCH------HHHHHHHHHHhhhcCCcccccc-C---cchhhhh
Q 018445 1 MAPRIAILGA-GIFVKTQYIPRLAEISDLVSLKFIWSRSE------ESAKSAAEVARKHFADVECVWG-D---NGLEQII 69 (355)
Q Consensus 1 m~~rigiiG~-G~~~~~~~~~~l~~~~~~~~vvai~d~~~------~~~~~~~~~~~~~~~~~~~~~~-~---~~~~ell 69 (355)
|.++|.|+|. |.+|.. .+..|.+.+ .+|+++ +|++ ++.+.+.+.. . +++....+ . +++++++
T Consensus 3 ~~~~ilVtGatG~iG~~-l~~~L~~~g--~~V~~~-~R~~~~~~~~~~~~~l~~~~-~--~~v~~v~~D~~d~~~l~~a~ 75 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKF-MVRASLSFS--HPTFIY-ARPLTPDSTPSSVQLREEFR-S--MGVTIIEGEMEEHEKMVSVL 75 (321)
T ss_dssp -CCCEEEETTTSTTHHH-HHHHHHHTT--CCEEEE-ECCCCTTCCHHHHHHHHHHH-H--TTCEEEECCTTCHHHHHHHH
T ss_pred cccEEEEEcCCchhHHH-HHHHHHhCC--CcEEEE-ECCcccccChHHHHHHHHhh-c--CCcEEEEecCCCHHHHHHHH
Confidence 3468999995 999975 778887654 566654 5553 4444332210 1 12221111 1 2455666
Q ss_pred cCCCccEEEEecCC---cccHHHHHHHHHcC
Q 018445 70 KEDSILGVAVVLAG---QAQVDTSLKLLKAG 97 (355)
Q Consensus 70 ~~~~~D~V~I~tp~---~~H~~~~~~al~~G 97 (355)
+. +|+|+.+... .....++.+|.++|
T Consensus 76 ~~--~d~vi~~a~~~~~~~~~~l~~aa~~~g 104 (321)
T 3c1o_A 76 KQ--VDIVISALPFPMISSQIHIINAIKAAG 104 (321)
T ss_dssp TT--CSEEEECCCGGGSGGGHHHHHHHHHHC
T ss_pred cC--CCEEEECCCccchhhHHHHHHHHHHhC
Confidence 64 8999988764 34455666666666
No 391
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=91.81 E-value=0.26 Score=43.88 Aligned_cols=74 Identities=23% Similarity=0.302 Sum_probs=44.2
Q ss_pred ceEEEEec-ccccchhccchhhhcCCeEEEEEEEeCCH----HHHHHHHHHHhhhcCCcccccc----CcchhhhhcCCC
Q 018445 3 PRIAILGA-GIFVKTQYIPRLAEISDLVSLKFIWSRSE----ESAKSAAEVARKHFADVECVWG----DNGLEQIIKEDS 73 (355)
Q Consensus 3 ~rigiiG~-G~~~~~~~~~~l~~~~~~~~vvai~d~~~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~ell~~~~ 73 (355)
+||.|+|+ |.+|.. .+..|.+.+ .+|+++ +|++ ++.+.+.+.. . +++....+ .+++++++++.+
T Consensus 11 ~~IlVtGatG~iG~~-l~~~L~~~g--~~V~~l-~R~~~~~~~~~~~~~~l~-~--~~v~~~~~Dl~d~~~l~~~~~~~~ 83 (346)
T 3i6i_A 11 GRVLIAGATGFIGQF-VATASLDAH--RPTYIL-ARPGPRSPSKAKIFKALE-D--KGAIIVYGLINEQEAMEKILKEHE 83 (346)
T ss_dssp CCEEEECTTSHHHHH-HHHHHHHTT--CCEEEE-ECSSCCCHHHHHHHHHHH-H--TTCEEEECCTTCHHHHHHHHHHTT
T ss_pred CeEEEECCCcHHHHH-HHHHHHHCC--CCEEEE-ECCCCCChhHHHHHHHHH-h--CCcEEEEeecCCHHHHHHHHhhCC
Confidence 58999997 989975 778887765 566655 4443 4544333211 1 12221111 134666777446
Q ss_pred ccEEEEecCC
Q 018445 74 ILGVAVVLAG 83 (355)
Q Consensus 74 ~D~V~I~tp~ 83 (355)
+|+|+.+...
T Consensus 84 ~d~Vi~~a~~ 93 (346)
T 3i6i_A 84 IDIVVSTVGG 93 (346)
T ss_dssp CCEEEECCCG
T ss_pred CCEEEECCch
Confidence 9999988765
No 392
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=91.74 E-value=0.69 Score=41.08 Aligned_cols=91 Identities=12% Similarity=0.147 Sum_probs=56.1
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhc--CCCccEEEEec
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIK--EDSILGVAVVL 81 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~--~~~~D~V~I~t 81 (355)
+|.|+|+|.+|.. .+..++..+ .+|+++ ++++++.+.+.+ .+......+...++.+.+. ...+|+|+.++
T Consensus 169 ~VlV~GaG~vG~~-a~qla~~~G--a~Vi~~-~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~ 240 (340)
T 3s2e_A 169 WVVISGIGGLGHV-AVQYARAMG--LRVAAV-DIDDAKLNLARR----LGAEVAVNARDTDPAAWLQKEIGGAHGVLVTA 240 (340)
T ss_dssp EEEEECCSTTHHH-HHHHHHHTT--CEEEEE-ESCHHHHHHHHH----TTCSEEEETTTSCHHHHHHHHHSSEEEEEESS
T ss_pred EEEEECCCHHHHH-HHHHHHHCC--CeEEEE-eCCHHHHHHHHH----cCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeC
Confidence 6899999999974 555555543 677665 778888876644 3111111111123333322 13699999999
Q ss_pred CCcccHHHHHHHHHcC-CeEEE
Q 018445 82 AGQAQVDTSLKLLKAG-KHVIQ 102 (355)
Q Consensus 82 p~~~H~~~~~~al~~G-khVl~ 102 (355)
......+.+..+++.| .-|++
T Consensus 241 g~~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 241 VSPKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp CCHHHHHHHHHHEEEEEEEEEC
T ss_pred CCHHHHHHHHHHhccCCEEEEe
Confidence 8777777777777665 44444
No 393
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=91.74 E-value=0.91 Score=40.81 Aligned_cols=90 Identities=17% Similarity=0.199 Sum_probs=54.5
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcC-CCccEEEEecC
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKE-DSILGVAVVLA 82 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~-~~~D~V~I~tp 82 (355)
+|.|+|+|.+|.. .+..++..+ .+|+++ ++++++.+.+.+ +. +....+.+++.+.+.+. ..+|+|+.++.
T Consensus 190 ~VlV~GaG~vG~~-~~q~a~~~G--a~Vi~~-~~~~~~~~~~~~---~l--Ga~~v~~~~~~~~~~~~~~~~D~vid~~g 260 (366)
T 1yqd_A 190 HIGIVGLGGLGHV-AVKFAKAFG--SKVTVI-STSPSKKEEALK---NF--GADSFLVSRDQEQMQAAAGTLDGIIDTVS 260 (366)
T ss_dssp EEEEECCSHHHHH-HHHHHHHTT--CEEEEE-ESCGGGHHHHHH---TS--CCSEEEETTCHHHHHHTTTCEEEEEECCS
T ss_pred EEEEECCCHHHHH-HHHHHHHCC--CEEEEE-eCCHHHHHHHHH---hc--CCceEEeccCHHHHHHhhCCCCEEEECCC
Confidence 6899999999974 565555543 677655 667777776553 23 22222112333333221 36999999998
Q ss_pred CcccHHHHHHHHHcC-CeEEE
Q 018445 83 GQAQVDTSLKLLKAG-KHVIQ 102 (355)
Q Consensus 83 ~~~H~~~~~~al~~G-khVl~ 102 (355)
.....+.+..+++.| +-|.+
T Consensus 261 ~~~~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 261 AVHPLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp SCCCSHHHHHHEEEEEEEEEC
T ss_pred cHHHHHHHHHHHhcCCEEEEE
Confidence 765566666777664 44444
No 394
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=91.69 E-value=0.37 Score=45.79 Aligned_cols=90 Identities=13% Similarity=-0.041 Sum_probs=56.2
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCH--HHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEe
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSE--ESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
.||-+||.|..|.......|.+.+ .+| .++|... ...+.+.+ . ++....+ .+.+.+..+ +|.|+++
T Consensus 20 ~~i~~iGiGg~Gms~lA~~l~~~G--~~V-~~sD~~~~~~~~~~L~~----~--gi~~~~G-~~~~~~~~~--~d~vV~S 87 (524)
T 3hn7_A 20 MHIHILGICGTFMGSLALLARALG--HTV-TGSDANIYPPMSTQLEQ----A--GVTIEEG-YLIAHLQPA--PDLVVVG 87 (524)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CEE-EEEESCCCTTHHHHHHH----T--TCEEEES-CCGGGGCSC--CSEEEEC
T ss_pred CEEEEEEecHhhHHHHHHHHHhCC--CEE-EEECCCCCcHHHHHHHH----C--CCEEECC-CCHHHcCCC--CCEEEEC
Confidence 489999999998753344445544 565 5568753 22333332 3 5544433 244555443 7888887
Q ss_pred cCCcccHHHHHHHHHcCCeEEEec
Q 018445 81 LAGQAQVDTSLKLLKAGKHVIQEK 104 (355)
Q Consensus 81 tp~~~H~~~~~~al~~GkhVl~EK 104 (355)
.--....+.+.+|.++|++|+-|.
T Consensus 88 pgi~~~~p~l~~a~~~gi~v~~~~ 111 (524)
T 3hn7_A 88 NAMKRGMDVIEYMLDTGLRYTSGP 111 (524)
T ss_dssp TTCCTTSHHHHHHHHHTCCEEEHH
T ss_pred CCcCCCCHHHHHHHHCCCcEEEHH
Confidence 655555566688899999999873
No 395
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=91.67 E-value=0.5 Score=41.08 Aligned_cols=86 Identities=19% Similarity=0.258 Sum_probs=48.8
Q ss_pred ceEEEEec-ccccchhccchhhhcCCeEEEEEEEeCC------HHHHHHHHHHHhhhcCCcccccc-C---cchhhhhcC
Q 018445 3 PRIAILGA-GIFVKTQYIPRLAEISDLVSLKFIWSRS------EESAKSAAEVARKHFADVECVWG-D---NGLEQIIKE 71 (355)
Q Consensus 3 ~rigiiG~-G~~~~~~~~~~l~~~~~~~~vvai~d~~------~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~ell~~ 71 (355)
++|.|+|. |.+|.. .+..|.+.+ .+|+++ +|+ +++++.+.+. .. +++....+ . +++.++++.
T Consensus 5 ~~ilVtGatG~iG~~-l~~~L~~~g--~~V~~l-~R~~~~~~~~~~~~~~~~l-~~--~~v~~v~~D~~d~~~l~~~~~~ 77 (308)
T 1qyc_A 5 SRILLIGATGYIGRH-VAKASLDLG--HPTFLL-VRESTASSNSEKAQLLESF-KA--SGANIVHGSIDDHASLVEAVKN 77 (308)
T ss_dssp CCEEEESTTSTTHHH-HHHHHHHTT--CCEEEE-CCCCCTTTTHHHHHHHHHH-HT--TTCEEECCCTTCHHHHHHHHHT
T ss_pred CEEEEEcCCcHHHHH-HHHHHHhCC--CCEEEE-ECCcccccCHHHHHHHHHH-Hh--CCCEEEEeccCCHHHHHHHHcC
Confidence 58999996 999975 777787654 466554 554 4444433221 11 12221111 1 245556664
Q ss_pred CCccEEEEecCCc---ccHHHHHHHHHcC
Q 018445 72 DSILGVAVVLAGQ---AQVDTSLKLLKAG 97 (355)
Q Consensus 72 ~~~D~V~I~tp~~---~H~~~~~~al~~G 97 (355)
+|+|+.+++.. ....++.+|.++|
T Consensus 78 --~d~vi~~a~~~~~~~~~~l~~aa~~~g 104 (308)
T 1qyc_A 78 --VDVVISTVGSLQIESQVNIIKAIKEVG 104 (308)
T ss_dssp --CSEEEECCCGGGSGGGHHHHHHHHHHC
T ss_pred --CCEEEECCcchhhhhHHHHHHHHHhcC
Confidence 89999887643 3345555555555
No 396
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=91.56 E-value=0.52 Score=42.00 Aligned_cols=131 Identities=14% Similarity=0.092 Sum_probs=72.9
Q ss_pred eEEEEecccccchhccchhhhc-CCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcc----hhhhhcCCCccEEE
Q 018445 4 RIAILGAGIFVKTQYIPRLAEI-SDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNG----LEQIIKEDSILGVA 78 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~-~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ell~~~~~D~V~ 78 (355)
+|.|+|+|.+|.. .+..++.. ++ .+|++ .++++++.+.+.+ . +....+.+.+ .+++.....+|+|+
T Consensus 173 ~VlV~GaG~vG~~-aiqlak~~~~G-a~Vi~-~~~~~~~~~~~~~----l--Ga~~vi~~~~~~~~~~~~~~g~g~D~vi 243 (344)
T 2h6e_A 173 VVIVNGIGGLAVY-TIQILKALMKN-ITIVG-ISRSKKHRDFALE----L--GADYVSEMKDAESLINKLTDGLGASIAI 243 (344)
T ss_dssp EEEEECCSHHHHH-HHHHHHHHCTT-CEEEE-ECSCHHHHHHHHH----H--TCSEEECHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCCHHHHH-HHHHHHHhcCC-CEEEE-EeCCHHHHHHHHH----h--CCCEEeccccchHHHHHhhcCCCccEEE
Confidence 6899999999974 55555554 13 67655 4778888776654 3 3322221122 12232223699999
Q ss_pred EecCCcccHHHHHHHHHcC-CeEEEe---cCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH
Q 018445 79 VVLAGQAQVDTSLKLLKAG-KHVIQE---KPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE 154 (355)
Q Consensus 79 I~tp~~~H~~~~~~al~~G-khVl~E---KP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~ 154 (355)
-++......+.+..+++.| +-|++- +|+..+.. .+..+ ++.+ .+........+..+.+++.+
T Consensus 244 d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~------~~~~~-------~~~i-~g~~~~~~~~~~~~~~l~~~ 309 (344)
T 2h6e_A 244 DLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAF------DTAVW-------NKKL-LGSNYGSLNDLEDVVRLSES 309 (344)
T ss_dssp ESSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHH------HHHHT-------TCEE-EECCSCCHHHHHHHHHHHHT
T ss_pred ECCCChHHHHHHHHHhhcCCEEEEeCCCCCCcccCHH------HHhhC-------CcEE-EEEecCCHHHHHHHHHHHHc
Confidence 9998876667777777664 444432 33334432 22222 3333 33333223456677777766
Q ss_pred hCCe
Q 018445 155 IGDM 158 (355)
Q Consensus 155 iG~i 158 (355)
|++
T Consensus 310 -g~i 312 (344)
T 2h6e_A 310 -GKI 312 (344)
T ss_dssp -TSS
T ss_pred -CCC
Confidence 544
No 397
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=91.51 E-value=0.055 Score=46.93 Aligned_cols=91 Identities=13% Similarity=0.025 Sum_probs=54.0
Q ss_pred ceEEEEe-cccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCcccccc-C---cchhhhhcCCCccEE
Q 018445 3 PRIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWG-D---NGLEQIIKEDSILGV 77 (355)
Q Consensus 3 ~rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~ell~~~~~D~V 77 (355)
|||.|+| +|.+|.. .+..|.+.++ .+|+++ ++++++++.+.. +++....+ . ++++++++ ++|+|
T Consensus 1 M~ilVtGatG~iG~~-l~~~L~~~~g-~~V~~~-~R~~~~~~~~~~------~~v~~~~~D~~d~~~l~~~~~--~~d~v 69 (289)
T 3e48_A 1 MNIMLTGATGHLGTH-ITNQAIANHI-DHFHIG-VRNVEKVPDDWR------GKVSVRQLDYFNQESMVEAFK--GMDTV 69 (289)
T ss_dssp CCEEEETTTSHHHHH-HHHHHHHTTC-TTEEEE-ESSGGGSCGGGB------TTBEEEECCTTCHHHHHHHTT--TCSEE
T ss_pred CEEEEEcCCchHHHH-HHHHHhhCCC-CcEEEE-ECCHHHHHHhhh------CCCEEEEcCCCCHHHHHHHHh--CCCEE
Confidence 5899999 5889975 6777776533 566655 677766543211 12211110 1 33555665 48999
Q ss_pred EEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhcc
Q 018445 78 AVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSI 123 (355)
Q Consensus 78 ~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~ 123 (355)
+.+........ .+....+.++++++++
T Consensus 70 i~~a~~~~~~~-------------------~~~~~~~~l~~aa~~~ 96 (289)
T 3e48_A 70 VFIPSIIHPSF-------------------KRIPEVENLVYAAKQS 96 (289)
T ss_dssp EECCCCCCSHH-------------------HHHHHHHHHHHHHHHT
T ss_pred EEeCCCCccch-------------------hhHHHHHHHHHHHHHc
Confidence 98876543221 1345567788888875
No 398
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=91.36 E-value=0.13 Score=42.53 Aligned_cols=93 Identities=16% Similarity=0.078 Sum_probs=55.6
Q ss_pred ceEEEEec-ccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCcccccc-Ccchh-hhhcCCCccEEEE
Q 018445 3 PRIAILGA-GIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWG-DNGLE-QIIKEDSILGVAV 79 (355)
Q Consensus 3 ~rigiiG~-G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-ell~~~~~D~V~I 79 (355)
|||.|+|+ |.+|.. .+..|.+.+ .+|+++ +|++++.+.+.. +++....+ .++.+ +.+. ++|+|+.
T Consensus 1 MkilVtGatG~iG~~-l~~~L~~~g--~~V~~~-~R~~~~~~~~~~------~~~~~~~~D~~d~~~~~~~--~~d~vi~ 68 (224)
T 3h2s_A 1 MKIAVLGATGRAGSA-IVAEARRRG--HEVLAV-VRDPQKAADRLG------ATVATLVKEPLVLTEADLD--SVDAVVD 68 (224)
T ss_dssp CEEEEETTTSHHHHH-HHHHHHHTT--CEEEEE-ESCHHHHHHHTC------TTSEEEECCGGGCCHHHHT--TCSEEEE
T ss_pred CEEEEEcCCCHHHHH-HHHHHHHCC--CEEEEE-EecccccccccC------CCceEEecccccccHhhcc--cCCEEEE
Confidence 58999997 889975 777777654 577655 788877664421 12221110 02222 3344 4899998
Q ss_pred ecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhcc
Q 018445 80 VLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSI 123 (355)
Q Consensus 80 ~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~ 123 (355)
+...... .+....+....+.++++++++
T Consensus 69 ~ag~~~~----------------~~~~~~n~~~~~~l~~a~~~~ 96 (224)
T 3h2s_A 69 ALSVPWG----------------SGRGYLHLDFATHLVSLLRNS 96 (224)
T ss_dssp CCCCCTT----------------SSCTHHHHHHHHHHHHTCTTC
T ss_pred CCccCCC----------------cchhhHHHHHHHHHHHHHHHc
Confidence 8765400 111234566678888888885
No 399
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=91.24 E-value=3 Score=34.02 Aligned_cols=74 Identities=12% Similarity=0.166 Sum_probs=46.2
Q ss_pred eEEEEecccccchhccchhh-hcCCeEEEEEEEeCCHHHHHHHHHHHhhh-cCCccccccCcchhhh---hcCCCccEEE
Q 018445 4 RIAILGAGIFVKTQYIPRLA-EISDLVSLKFIWSRSEESAKSAAEVARKH-FADVECVWGDNGLEQI---IKEDSILGVA 78 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~-~~~~~~~vvai~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~el---l~~~~~D~V~ 78 (355)
+|.=||||. |. ++..+. ..++ .+++|| |.+++..+.+.+...+. .+++... ..|..++ +.+..+|.|+
T Consensus 41 ~vLDiGcG~-G~--~~~~la~~~p~-~~v~gi-D~s~~~l~~a~~~~~~~~~~nv~~~--~~d~~~l~~~~~~~~~d~v~ 113 (213)
T 2fca_A 41 IHIEVGTGK-GQ--FISGMAKQNPD-INYIGI-ELFKSVIVTAVQKVKDSEAQNVKLL--NIDADTLTDVFEPGEVKRVY 113 (213)
T ss_dssp EEEEECCTT-SH--HHHHHHHHCTT-SEEEEE-CSCHHHHHHHHHHHHHSCCSSEEEE--CCCGGGHHHHCCTTSCCEEE
T ss_pred eEEEEecCC-CH--HHHHHHHHCCC-CCEEEE-EechHHHHHHHHHHHHcCCCCEEEE--eCCHHHHHhhcCcCCcCEEE
Confidence 567799995 43 344444 3454 688877 99999988877655433 2233222 2455544 5566799998
Q ss_pred EecCCc
Q 018445 79 VVLAGQ 84 (355)
Q Consensus 79 I~tp~~ 84 (355)
+.-|+.
T Consensus 114 ~~~~~p 119 (213)
T 2fca_A 114 LNFSDP 119 (213)
T ss_dssp EESCCC
T ss_pred EECCCC
Confidence 876543
No 400
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=91.13 E-value=0.28 Score=44.30 Aligned_cols=41 Identities=12% Similarity=0.139 Sum_probs=33.2
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHH
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAE 47 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~ 47 (355)
-||+|||+|.+|.. .+..+...+ .+| -++|+++++++.+.+
T Consensus 185 ~kV~ViG~G~iG~~-aa~~a~~lG--a~V-~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 185 ASALVLGVGVAGLQ-ALATAKRLG--AKT-TGYDVRPEVAEQVRS 225 (381)
T ss_dssp CEEEEESCSHHHHH-HHHHHHHHT--CEE-EEECSSGGGHHHHHH
T ss_pred CEEEEECchHHHHH-HHHHHHHCC--CEE-EEEeCCHHHHHHHHH
Confidence 58999999999985 677777775 564 578999999888765
No 401
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.05 E-value=0.25 Score=44.96 Aligned_cols=41 Identities=10% Similarity=0.168 Sum_probs=32.2
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHH
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAE 47 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~ 47 (355)
-+|+|||+|.+|.. .+..+...+ .+ |-++|+++++++.+.+
T Consensus 173 ~~V~ViGaG~iG~~-aa~~a~~~G--a~-V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQ-AIATAKRLG--AV-VMATDVRAATKEQVES 213 (384)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CE-EEEECSCSTTHHHHHH
T ss_pred CEEEEECCCHHHHH-HHHHHHHCC--CE-EEEEeCCHHHHHHHHH
Confidence 48999999999975 677777665 56 6778999988877654
No 402
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=91.02 E-value=0.32 Score=45.39 Aligned_cols=60 Identities=8% Similarity=0.039 Sum_probs=47.4
Q ss_pred cchhhhhcCC-CccEEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhcc
Q 018445 63 NGLEQIIKED-SILGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSI 123 (355)
Q Consensus 63 ~~~~ell~~~-~~D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~ 123 (355)
.+|.++.+.+ .+|+++|++|...-.+.+.+|+++|.+++|= .-....+.-++|.+.++++
T Consensus 25 ~~~~~~~~~p~~~DlavI~vPa~~v~~~v~e~~~~Gv~~vii-s~Gf~~~~~~~l~~~A~~~ 85 (480)
T 3dmy_A 25 RRWDSACQKLPDANLALISVAGEYAAELANQALDRNLNVMMF-SDNVTLEDEIQLKTRAREK 85 (480)
T ss_dssp SSHHHHHHHSTTCCEEEECSCHHHHHHHHHHHHHTTCEEEEC-CCCCCHHHHHHHHHHHHHT
T ss_pred chHHHHHhcCCCCCEEEEecCHHHHHHHHHHHHhcCCCEEEE-CCCCCHHHHHHHHHHHHHc
Confidence 6677776653 6999999999999999999999999776661 1223356678899999994
No 403
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=91.00 E-value=0.83 Score=37.40 Aligned_cols=73 Identities=10% Similarity=0.077 Sum_probs=44.9
Q ss_pred eEEEEecccccchhccchhh-hcCCeEEEEEEEeCCHHHHHHHHHHHhhhc-CCccccccCcchhhh---hcCCCccEEE
Q 018445 4 RIAILGAGIFVKTQYIPRLA-EISDLVSLKFIWSRSEESAKSAAEVARKHF-ADVECVWGDNGLEQI---IKEDSILGVA 78 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~-~~~~~~~vvai~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~el---l~~~~~D~V~ 78 (355)
+|.=||||. |. ++..+. ..++ .+++|+ |.+++..+.+.+...... +++... ..|..++ +.+..+|+|+
T Consensus 44 ~vLDiGcG~-G~--~~~~la~~~p~-~~v~gv-D~s~~~l~~a~~~~~~~~~~~v~~~--~~d~~~~~~~~~~~~~D~i~ 116 (214)
T 1yzh_A 44 IHVEVGSGK-GA--FVSGMAKQNPD-INYIGI-DIQKSVLSYALDKVLEVGVPNIKLL--WVDGSDLTDYFEDGEIDRLY 116 (214)
T ss_dssp EEEEESCTT-SH--HHHHHHHHCTT-SEEEEE-ESCHHHHHHHHHHHHHHCCSSEEEE--ECCSSCGGGTSCTTCCSEEE
T ss_pred eEEEEccCc-CH--HHHHHHHHCCC-CCEEEE-EcCHHHHHHHHHHHHHcCCCCEEEE--eCCHHHHHhhcCCCCCCEEE
Confidence 678899995 43 333344 4454 688776 999999888776554332 233222 1444443 4456799999
Q ss_pred EecCC
Q 018445 79 VVLAG 83 (355)
Q Consensus 79 I~tp~ 83 (355)
+.-|.
T Consensus 117 ~~~~~ 121 (214)
T 1yzh_A 117 LNFSD 121 (214)
T ss_dssp EESCC
T ss_pred EECCC
Confidence 87554
No 404
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=90.98 E-value=0.37 Score=42.92 Aligned_cols=90 Identities=11% Similarity=0.030 Sum_probs=59.1
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccc--cCcchhhhh----cCCCccEE
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVW--GDNGLEQII----KEDSILGV 77 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ell----~~~~~D~V 77 (355)
+|.|+|+|.+|.. .+..++..+ ..++.++|+++++.+.+.+ . +....+ ...+..+.. +...+|+|
T Consensus 163 ~VlV~GaG~vG~~-aiq~ak~~G--~~~vi~~~~~~~k~~~a~~----l--Ga~~~i~~~~~~~~~~~~~~~~~~g~d~v 233 (346)
T 4a2c_A 163 NVIIIGAGTIGLL-AIQCAVALG--AKSVTAIDISSEKLALAKS----F--GAMQTFNSSEMSAPQMQSVLRELRFNQLI 233 (346)
T ss_dssp EEEEECCSHHHHH-HHHHHHHTT--CSEEEEEESCHHHHHHHHH----T--TCSEEEETTTSCHHHHHHHHGGGCSSEEE
T ss_pred EEEEECCCCcchH-HHHHHHHcC--CcEEEEEechHHHHHHHHH----c--CCeEEEeCCCCCHHHHHHhhcccCCcccc
Confidence 6899999999974 566555554 4566677999998876654 3 222221 112333332 33568999
Q ss_pred EEecCCcccHHHHHHHHHcCCeEEE
Q 018445 78 AVVLAGQAQVDTSLKLLKAGKHVIQ 102 (355)
Q Consensus 78 ~I~tp~~~H~~~~~~al~~GkhVl~ 102 (355)
+-++......+.+..+++.|-.+.+
T Consensus 234 ~d~~G~~~~~~~~~~~l~~~G~~v~ 258 (346)
T 4a2c_A 234 LETAGVPQTVELAVEIAGPHAQLAL 258 (346)
T ss_dssp EECSCSHHHHHHHHHHCCTTCEEEE
T ss_pred cccccccchhhhhhheecCCeEEEE
Confidence 9999887778888888877755443
No 405
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=90.95 E-value=0.38 Score=41.04 Aligned_cols=95 Identities=16% Similarity=0.271 Sum_probs=55.4
Q ss_pred ceEEEEecccccchhccchhhhc-CCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhh-hcCCCccEEEEe
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEI-SDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQI-IKEDSILGVAVV 80 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~-~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el-l~~~~~D~V~I~ 80 (355)
.+|.-||||. |. +...+.+. ++ .+++++ |.+++..+.+.+. .+++... ..|.+++ +.+...|+|+..
T Consensus 87 ~~vLdiG~G~-G~--~~~~l~~~~~~-~~v~~v-D~s~~~~~~a~~~----~~~~~~~--~~d~~~~~~~~~~fD~v~~~ 155 (269)
T 1p91_A 87 TAVLDIGCGE-GY--YTHAFADALPE-ITTFGL-DVSKVAIKAAAKR----YPQVTFC--VASSHRLPFSDTSMDAIIRI 155 (269)
T ss_dssp CEEEEETCTT-ST--THHHHHHTCTT-SEEEEE-ESCHHHHHHHHHH----CTTSEEE--ECCTTSCSBCTTCEEEEEEE
T ss_pred CEEEEECCCC-CH--HHHHHHHhCCC-CeEEEE-eCCHHHHHHHHHh----CCCcEEE--EcchhhCCCCCCceeEEEEe
Confidence 4799999997 64 44445443 44 577765 9999988877652 2333222 1455554 344569999854
Q ss_pred cCCcccHHHHHHHHHcCCeEEEecCCCCC
Q 018445 81 LAGQAQVDTSLKLLKAGKHVIQEKPAAAN 109 (355)
Q Consensus 81 tp~~~H~~~~~~al~~GkhVl~EKP~a~~ 109 (355)
. ......-+...|+-|=.+++.-|-...
T Consensus 156 ~-~~~~l~~~~~~L~pgG~l~~~~~~~~~ 183 (269)
T 1p91_A 156 Y-APCKAEELARVVKPGGWVITATPGPRH 183 (269)
T ss_dssp S-CCCCHHHHHHHEEEEEEEEEEEECTTT
T ss_pred C-ChhhHHHHHHhcCCCcEEEEEEcCHHH
Confidence 3 334455555555555444444444433
No 406
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=90.93 E-value=0.15 Score=44.59 Aligned_cols=112 Identities=13% Similarity=0.076 Sum_probs=62.2
Q ss_pred CCceEEEEe-cccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEE
Q 018445 1 MAPRIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 1 m~~rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I 79 (355)
|.+||.|+| +|.+|.. .+..|.+.+ .+|+++ ++++...+ +.. ..-...++. . ++++++++ ++|+|+.
T Consensus 1 M~~~vlVtGatG~iG~~-l~~~L~~~g--~~V~~~-~r~~~~~~-~~~-~~~~~~Dl~-~---~~~~~~~~--~~d~Vih 68 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQY-VVESIKNDG--NTPIIL-TRSIGNKA-IND-YEYRVSDYT-L---EDLINQLN--DVDAVVH 68 (311)
T ss_dssp -CCEEEEETTTSHHHHH-HHHHHHHTT--CEEEEE-ESCCC------C-CEEEECCCC-H---HHHHHHTT--TCSEEEE
T ss_pred CCCEEEEECCCcHHHHH-HHHHHHhCC--CEEEEE-eCCCCccc-CCc-eEEEEcccc-H---HHHHHhhc--CCCEEEE
Confidence 889999999 6889975 777887754 577665 55544433 210 000011221 1 45666776 5999998
Q ss_pred ecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccC
Q 018445 80 VLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRF 141 (355)
Q Consensus 80 ~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~ 141 (355)
+....... --++-+..++.....|++++++++ .+..+++....-|
T Consensus 69 ~a~~~~~~-------------~~~~~~~~n~~~~~~ll~a~~~~~----~~r~v~~SS~~vy 113 (311)
T 3m2p_A 69 LAATRGSQ-------------GKISEFHDNEILTQNLYDACYENN----ISNIVYASTISAY 113 (311)
T ss_dssp CCCCCCSS-------------SCGGGTHHHHHHHHHHHHHHHHTT----CCEEEEEEEGGGC
T ss_pred ccccCCCC-------------ChHHHHHHHHHHHHHHHHHHHHcC----CCEEEEEccHHHh
Confidence 76554322 112223345566788888888852 1235555554444
No 407
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A*
Probab=90.93 E-value=0.21 Score=42.85 Aligned_cols=88 Identities=7% Similarity=-0.038 Sum_probs=49.5
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEE------------------------eCCHHHHHHHHHHHhhhcCCc
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIW------------------------SRSEESAKSAAEVARKHFADV 56 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~------------------------d~~~~~~~~~~~~~~~~~~~~ 56 (355)
|++|+-|||||..|.. -+..|...+ .+++|+= ..+++++++.++
T Consensus 1 ~~vki~VvGvGGAG~N-ii~rL~~~G--a~~iAiNTD~q~L~~~k~~~~~~i~~gglGAGgdpe~g~e~a~--------- 68 (315)
T 3r4v_A 1 MPVKVCLIFAGGTGMN-VATKLVDLG--EAVHCFDTCDKNVVDVHRSVNVTLTKGTRGAGGNRKVILPLVR--------- 68 (315)
T ss_dssp -CBSCEEEEEHHHHHH-HHGGGGGGG--GGEEEEESSSTTCCGGGGGSEEEECTTCCC---CHHHHHHHHG---------
T ss_pred CCceEEEEEEcCcchH-HHHHHHHcC--CCEEEEECchHHhhhhhhhcceeeecccCCCCCChHHHHHHHH---------
Confidence 8999999999998876 565565432 3444441 112332222221
Q ss_pred cccccCcchhhhhcC-CCccEEEEecCC------cccHHHHHHHHHcCC--eEEEecCC
Q 018445 57 ECVWGDNGLEQIIKE-DSILGVAVVLAG------QAQVDTSLKLLKAGK--HVIQEKPA 106 (355)
Q Consensus 57 ~~~~~~~~~~ell~~-~~~D~V~I~tp~------~~H~~~~~~al~~Gk--hVl~EKP~ 106 (355)
++.+++.+. ++.|+|+|+..- ..=.-++..|-+.|. ..++-.|+
T Consensus 69 ------e~~~eI~~~l~~aD~VFVtaGLGGGTGTGaAPVvAeiake~GalvVavVt~~~ 121 (315)
T 3r4v_A 69 ------PQIPALMDTIPEADFYIVCYSLGGGSGSVLGPLITGQLADRKASFVSFVVGAM 121 (315)
T ss_dssp ------GGHHHHHHTSCCBSCEEEEEESSSSSHHHHHHHHHHHHHHTTCCEEEEEEECC
T ss_pred ------hhHHHHHHhcCCCCEEEEEeccCCccccchHHHHHHHHHHcCCCEEEEEecCC
Confidence 334444443 458999998433 344556666777774 35566664
No 408
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=90.78 E-value=1.7 Score=37.46 Aligned_cols=59 Identities=20% Similarity=0.180 Sum_probs=51.1
Q ss_pred chhhhhcCCCccEEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccC
Q 018445 64 GLEQIIKEDSILGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSIC 124 (355)
Q Consensus 64 ~~~ell~~~~~D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~ 124 (355)
+.+. +++- +|++-|++..-...++.+++.+.||+|++-++++.+++|.+..++..++.|
T Consensus 103 ~v~~-l~~~-vd~lqIgA~~~~n~~LLr~va~~gkPVilK~G~~~t~~ei~~ave~i~~~G 161 (285)
T 3sz8_A 103 QAAP-VAEI-ADVLQVPAFLARQTDLVVAIAKAGKPVNVKKPQFMSPTQLKHVVSKCGEVG 161 (285)
T ss_dssp GHHH-HHTT-CSEEEECGGGTTCHHHHHHHHHTSSCEEEECCTTSCGGGTHHHHHHHHHTT
T ss_pred HHHH-HHHh-CCEEEECccccCCHHHHHHHHccCCcEEEeCCCCCCHHHHHHHHHHHHHcC
Confidence 4444 4444 999999999999999999999999999999999999999988888888763
No 409
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=90.76 E-value=0.57 Score=44.14 Aligned_cols=87 Identities=16% Similarity=0.037 Sum_probs=55.2
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHH-HHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEES-AKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
||.|||.|..|.......|.+.+ .+|. ++|..+.. .+.+. +. ++....+ .+.+. +. ++|+|+++.-
T Consensus 24 ~v~viGiG~sG~s~~A~~l~~~G--~~V~-~~D~~~~~~~~~l~----~~--gi~~~~g-~~~~~-~~--~~d~vV~Spg 90 (494)
T 4hv4_A 24 HIHFVGIGGAGMGGIAEVLANEG--YQIS-GSDLAPNSVTQHLT----AL--GAQIYFH-HRPEN-VL--DASVVVVSTA 90 (494)
T ss_dssp EEEEETTTSTTHHHHHHHHHHTT--CEEE-EECSSCCHHHHHHH----HT--TCEEESS-CCGGG-GT--TCSEEEECTT
T ss_pred EEEEEEEcHhhHHHHHHHHHhCC--CeEE-EEECCCCHHHHHHH----HC--CCEEECC-CCHHH-cC--CCCEEEECCC
Confidence 89999999998743455556654 5764 56765433 22222 23 5544433 23333 43 3898888765
Q ss_pred CcccHHHHHHHHHcCCeEEEe
Q 018445 83 GQAQVDTSLKLLKAGKHVIQE 103 (355)
Q Consensus 83 ~~~H~~~~~~al~~GkhVl~E 103 (355)
-....+.+.+|.++|++|+-|
T Consensus 91 i~~~~p~~~~a~~~gi~v~~~ 111 (494)
T 4hv4_A 91 ISADNPEIVAAREARIPVIRR 111 (494)
T ss_dssp SCTTCHHHHHHHHTTCCEEEH
T ss_pred CCCCCHHHHHHHHCCCCEEcH
Confidence 555566777889999999987
No 410
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=90.62 E-value=0.82 Score=37.33 Aligned_cols=90 Identities=13% Similarity=0.125 Sum_probs=56.6
Q ss_pred ceEEEEe-cccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCcccccc-Ccchh-hhhcCCCccEEEE
Q 018445 3 PRIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWG-DNGLE-QIIKEDSILGVAV 79 (355)
Q Consensus 3 ~rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-ell~~~~~D~V~I 79 (355)
|||.|+| +|.+|.. .+..|.+.+ .+|+++ +|++++.+.+. +++....+ .++.+ +.+. ++|+|+.
T Consensus 1 MkvlVtGatG~iG~~-l~~~L~~~g--~~V~~~-~R~~~~~~~~~-------~~~~~~~~D~~d~~~~~~~--~~d~vi~ 67 (221)
T 3ew7_A 1 MKIGIIGATGRAGSR-ILEEAKNRG--HEVTAI-VRNAGKITQTH-------KDINILQKDIFDLTLSDLS--DQNVVVD 67 (221)
T ss_dssp CEEEEETTTSHHHHH-HHHHHHHTT--CEEEEE-ESCSHHHHHHC-------SSSEEEECCGGGCCHHHHT--TCSEEEE
T ss_pred CeEEEEcCCchhHHH-HHHHHHhCC--CEEEEE-EcCchhhhhcc-------CCCeEEeccccChhhhhhc--CCCEEEE
Confidence 5899999 5889975 777777654 577655 77777665432 13221111 02221 3444 4899998
Q ss_pred ecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhcc
Q 018445 80 VLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSI 123 (355)
Q Consensus 80 ~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~ 123 (355)
+...... ....+..-.+.+++.+++.
T Consensus 68 ~ag~~~~------------------~~~~~~~~~~~l~~a~~~~ 93 (221)
T 3ew7_A 68 AYGISPD------------------EAEKHVTSLDHLISVLNGT 93 (221)
T ss_dssp CCCSSTT------------------TTTSHHHHHHHHHHHHCSC
T ss_pred CCcCCcc------------------ccchHHHHHHHHHHHHHhc
Confidence 8766321 2345677788899999885
No 411
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=90.59 E-value=0.37 Score=41.87 Aligned_cols=74 Identities=22% Similarity=0.218 Sum_probs=47.6
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcC-C--ccccccCcchhhhhcCCCccEEEEe
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFA-D--VECVWGDNGLEQIIKEDSILGVAVV 80 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~ell~~~~~D~V~I~ 80 (355)
++.|+|+|.+|+. ....|.+.+ +| .+++++.++++.+++.....+. . +.... .++.+.+ .++|+|+.+
T Consensus 130 ~vlV~GaGgiG~a-ia~~L~~~G---~V-~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~--~~~~~~~--~~~DilVn~ 200 (287)
T 1nvt_A 130 NIVIYGAGGAARA-VAFELAKDN---NI-IIANRTVEKAEALAKEIAEKLNKKFGEEVKF--SGLDVDL--DGVDIIINA 200 (287)
T ss_dssp EEEEECCSHHHHH-HHHHHTSSS---EE-EEECSSHHHHHHHHHHHHHHHTCCHHHHEEE--ECTTCCC--TTCCEEEEC
T ss_pred EEEEECchHHHHH-HHHHHHHCC---CE-EEEECCHHHHHHHHHHHhhhcccccceeEEE--eeHHHhh--CCCCEEEEC
Confidence 7999999999875 677777654 44 5689999999888764322110 0 01111 2333333 349999999
Q ss_pred cCCccc
Q 018445 81 LAGQAQ 86 (355)
Q Consensus 81 tp~~~H 86 (355)
+|...+
T Consensus 201 ag~~~~ 206 (287)
T 1nvt_A 201 TPIGMY 206 (287)
T ss_dssp SCTTCT
T ss_pred CCCCCC
Confidence 997654
No 412
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=90.58 E-value=0.93 Score=37.67 Aligned_cols=107 Identities=14% Similarity=0.154 Sum_probs=64.1
Q ss_pred CceEEEEec-ccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCc-ccccc--CcchhhhhcCCCccEE
Q 018445 2 APRIAILGA-GIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADV-ECVWG--DNGLEQIIKEDSILGV 77 (355)
Q Consensus 2 ~~rigiiG~-G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~ell~~~~~D~V 77 (355)
.+||.|.|+ |.+|.. .+..|.+.+ .+|++ +++++++.+.+.+. ++ ....+ .+++.+.+. ++|+|
T Consensus 21 ~~~ilVtGatG~iG~~-l~~~L~~~G--~~V~~-~~R~~~~~~~~~~~------~~~~~~~~Dl~~~~~~~~~--~~D~v 88 (236)
T 3e8x_A 21 GMRVLVVGANGKVARY-LLSELKNKG--HEPVA-MVRNEEQGPELRER------GASDIVVANLEEDFSHAFA--SIDAV 88 (236)
T ss_dssp CCEEEEETTTSHHHHH-HHHHHHHTT--CEEEE-EESSGGGHHHHHHT------TCSEEEECCTTSCCGGGGT--TCSEE
T ss_pred CCeEEEECCCChHHHH-HHHHHHhCC--CeEEE-EECChHHHHHHHhC------CCceEEEcccHHHHHHHHc--CCCEE
Confidence 468999997 889975 777777654 57755 47888887766541 22 11110 034556665 49999
Q ss_pred EEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEe
Q 018445 78 AVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAE 137 (355)
Q Consensus 78 ~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~ 137 (355)
+.+........ .++-+..++.....+++.+++.+ .+.+++++.
T Consensus 89 i~~ag~~~~~~-------------~~~~~~~n~~~~~~l~~a~~~~~----~~~iv~~SS 131 (236)
T 3e8x_A 89 VFAAGSGPHTG-------------ADKTILIDLWGAIKTIQEAEKRG----IKRFIMVSS 131 (236)
T ss_dssp EECCCCCTTSC-------------HHHHHHTTTHHHHHHHHHHHHHT----CCEEEEECC
T ss_pred EECCCCCCCCC-------------ccccchhhHHHHHHHHHHHHHcC----CCEEEEEec
Confidence 98876542100 12223345666778888887752 234555544
No 413
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=90.56 E-value=0.51 Score=41.57 Aligned_cols=73 Identities=15% Similarity=0.153 Sum_probs=45.9
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeC-CHHH----------HHHHHHHHhhhcCCcccccc--Cc--ch
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSR-SEES----------AKSAAEVARKHFADVECVWG--DN--GL 65 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~-~~~~----------~~~~~~~~~~~~~~~~~~~~--~~--~~ 65 (355)
|+|||.++|+..++.. .+..|.+.+ .+|++|+.. +..+ .+.++. ++ +++.... .. ..
T Consensus 1 ~~mrivf~Gtp~fa~~-~L~~L~~~~--~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~---~~--gIpv~~~~~~~~~~~ 72 (314)
T 3tqq_A 1 MSLKIVFAGTPQFAVP-TLRALIDSS--HRVLAVYTQPDRPSGRGQKIMESPVKEIAR---QN--EIPIIQPFSLRDEVE 72 (314)
T ss_dssp CCCEEEEEECSGGGHH-HHHHHHHSS--SEEEEEECCCC----------CCHHHHHHH---HT--TCCEECCSCSSSHHH
T ss_pred CCcEEEEECCCHHHHH-HHHHHHHCC--CeEEEEEeCCCCccccCCccCCCHHHHHHH---Hc--CCCEECcccCCCHHH
Confidence 9999999999999975 788887653 689998873 3321 123333 34 4442210 01 23
Q ss_pred hhhhcCCCccEEEEec
Q 018445 66 EQIIKEDSILGVAVVL 81 (355)
Q Consensus 66 ~ell~~~~~D~V~I~t 81 (355)
-+.|.+.++|+++++.
T Consensus 73 ~~~l~~~~~Dliv~~~ 88 (314)
T 3tqq_A 73 QEKLIAMNADVMVVVA 88 (314)
T ss_dssp HHHHHTTCCSEEEEES
T ss_pred HHHHHhcCCCEEEEcC
Confidence 4556677899988873
No 414
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=90.48 E-value=0.47 Score=47.66 Aligned_cols=88 Identities=15% Similarity=0.076 Sum_probs=56.4
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCH-------------------HHHHHHHHHHhhhcCCccccccCc
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSE-------------------ESAKSAAEVARKHFADVECVWGDN 63 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~ 63 (355)
-||.|||+|..|.. .+..|.+.+ +.=+.|+|.+. .+++.++++.++..|.+.......
T Consensus 412 ~~vlvvG~GglG~~-~~~~L~~~G--vg~i~l~D~d~v~~snl~rq~~~~~~~vg~~Ka~~~~~~l~~~np~~~v~~~~~ 488 (805)
T 2nvu_B 412 CKVLVIGAGGLGCE-LLKNLALSG--FRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFN 488 (805)
T ss_dssp CCEEEECCSSHHHH-HHHHHHTTT--CCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCEEEEEES
T ss_pred CeEEEECCCHHHHH-HHHHHHHcC--CCcEEEECCCeecccccccccccchhhcCChHHHHHHHHHHHHCCCCEEEEEec
Confidence 58999999999986 788888755 44446777753 456667776666677764322111
Q ss_pred c----hhhhhcCCCccEEEEecCCccc-HHHHHHHHH
Q 018445 64 G----LEQIIKEDSILGVAVVLAGQAQ-VDTSLKLLK 95 (355)
Q Consensus 64 ~----~~ell~~~~~D~V~I~tp~~~H-~~~~~~al~ 95 (355)
. -.++++. .|+|+.|+.+..- .-+-..|.+
T Consensus 489 ~~~~~~~~~~~~--~d~vv~~~d~~~~r~~in~~~~~ 523 (805)
T 2nvu_B 489 KIQDFNDTFYRQ--FHIIVCGLDSIIARRWINGMLIS 523 (805)
T ss_dssp CGGGSCHHHHHT--CSEEEECCSCHHHHHHHHHHHHH
T ss_pred cccccHHHHHhc--CCEEEECCCCHHHHHHHHHHHHH
Confidence 1 1456664 8999999877543 334344444
No 415
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=90.46 E-value=0.27 Score=50.39 Aligned_cols=94 Identities=12% Similarity=0.080 Sum_probs=60.7
Q ss_pred CceEEEEecccccchhccchhhhcCCeE-----EEEEEEeCCH-------------------HHHHHHHHHHhhhcCCc-
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLV-----SLKFIWSRSE-------------------ESAKSAAEVARKHFADV- 56 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~-----~vvai~d~~~-------------------~~~~~~~~~~~~~~~~~- 56 (355)
..||.|||+|..|.. .+..|...+ + .=+.++|.|. .+++.+++..++..|.+
T Consensus 425 ~~~VlvVGaGGlGse-vlk~La~~G--v~~g~~G~i~lvD~D~Ve~SNLnRQ~lf~~~dvG~~Ka~~aa~~l~~iNP~v~ 501 (1015)
T 3cmm_A 425 NSKVFLVGSGAIGCE-MLKNWALLG--LGSGSDGYIVVTDNDSIEKSNLNRQFLFRPKDVGKNKSEVAAEAVCAMNPDLK 501 (1015)
T ss_dssp TCEEEEECCSHHHHH-HHHHHHHHT--TTCSTTCEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCGGGT
T ss_pred cCeEEEEecCHHHHH-HHHHHHHcC--cCcCCCCeEEEEeCCEeccccccccccCChhhCCCHHHHHHHHHHHHHCCCCc
Confidence 358999999999986 788887654 2 2235556532 45666677666777776
Q ss_pred -cccccCc-----ch----hhhhcCCCccEEEEecCCc-ccHHHHHHHHHcCCeE
Q 018445 57 -ECVWGDN-----GL----EQIIKEDSILGVAVVLAGQ-AQVDTSLKLLKAGKHV 100 (355)
Q Consensus 57 -~~~~~~~-----~~----~ell~~~~~D~V~I~tp~~-~H~~~~~~al~~GkhV 100 (355)
....... +. +++++. +|+|+.++.+. .+..+-..|...++++
T Consensus 502 ~~v~~~~~~i~~~~~~~~~~~~~~~--~D~Vi~a~Dn~~aR~~ln~~c~~~~~Pl 554 (1015)
T 3cmm_A 502 GKINAKIDKVGPETEEIFNDSFWES--LDFVTNALDNVDARTYVDRRCVFYRKPL 554 (1015)
T ss_dssp TTEEEECCCCSGGGTTTSCHHHHHH--CSEEEECCSSHHHHHHHHHHHHHHTCCE
T ss_pred ceEEEEecccCchhhhhccHhhhcc--CCEEEECCCCHHHHHHHHHHHHHcCCcE
Confidence 3221111 11 344554 89999999885 5666667788877763
No 416
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=90.45 E-value=0.91 Score=37.53 Aligned_cols=74 Identities=11% Similarity=0.163 Sum_probs=48.2
Q ss_pred eEEEEecccccchhccchhh-hcCCeEEEEEEEeCCHHHHHHHHHHHhhh-cCCccccccCcchhhh----hcCCCccEE
Q 018445 4 RIAILGAGIFVKTQYIPRLA-EISDLVSLKFIWSRSEESAKSAAEVARKH-FADVECVWGDNGLEQI----IKEDSILGV 77 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~-~~~~~~~vvai~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~el----l~~~~~D~V 77 (355)
+|.=||||. |. ++..+. ..++ .+++|| |.+++..+.+.+...+. ..++... ..|..++ +.+..+|.|
T Consensus 37 ~vLDiGcG~-G~--~~~~lA~~~p~-~~v~gi-D~s~~~l~~a~~~~~~~~l~nv~~~--~~Da~~~l~~~~~~~~~d~v 109 (218)
T 3dxy_A 37 VTLEIGFGM-GA--SLVAMAKDRPE-QDFLGI-EVHSPGVGACLASAHEEGLSNLRVM--CHDAVEVLHKMIPDNSLRMV 109 (218)
T ss_dssp EEEEESCTT-CH--HHHHHHHHCTT-SEEEEE-CSCHHHHHHHHHHHHHTTCSSEEEE--CSCHHHHHHHHSCTTCEEEE
T ss_pred eEEEEeeeC-hH--HHHHHHHHCCC-CeEEEE-EecHHHHHHHHHHHHHhCCCcEEEE--ECCHHHHHHHHcCCCChheE
Confidence 567799995 53 344444 4455 688887 99999888877655433 2233322 2677765 556789999
Q ss_pred EEecCCc
Q 018445 78 AVVLAGQ 84 (355)
Q Consensus 78 ~I~tp~~ 84 (355)
++.-|+.
T Consensus 110 ~~~~~~p 116 (218)
T 3dxy_A 110 QLFFPDP 116 (218)
T ss_dssp EEESCCC
T ss_pred EEeCCCC
Confidence 9886554
No 417
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=90.42 E-value=0.43 Score=44.52 Aligned_cols=64 Identities=14% Similarity=0.074 Sum_probs=46.5
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecCC
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLAG 83 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp~ 83 (355)
+++|+|+|.+|.. ....+...+ ++| .++|+++.+++.+.. . +.. + .+.++++.. .|+|+.++.+
T Consensus 267 tVvVtGaGgIG~a-iA~~Laa~G--A~V-iv~D~~~~~a~~Aa~----~--g~d--v--~~lee~~~~--aDvVi~atG~ 330 (488)
T 3ond_A 267 VAVVAGYGDVGKG-CAAALKQAG--ARV-IVTEIDPICALQATM----E--GLQ--V--LTLEDVVSE--ADIFVTTTGN 330 (488)
T ss_dssp EEEEECCSHHHHH-HHHHHHHTT--CEE-EEECSCHHHHHHHHH----T--TCE--E--CCGGGTTTT--CSEEEECSSC
T ss_pred EEEEECCCHHHHH-HHHHHHHCC--CEE-EEEcCCHHHHHHHHH----h--CCc--c--CCHHHHHHh--cCEEEeCCCC
Confidence 7899999999985 777777765 566 567999988877654 1 221 1 577888775 8888876543
No 418
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=90.35 E-value=2.6 Score=38.15 Aligned_cols=59 Identities=12% Similarity=0.035 Sum_probs=52.0
Q ss_pred chhhhhcCCCccEEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccC
Q 018445 64 GLEQIIKEDSILGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSIC 124 (355)
Q Consensus 64 ~~~ell~~~~~D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~ 124 (355)
+.+.+ ++- +|++-|++.+-..+++.+++.+.||+|++-+++..|++|....++..++.|
T Consensus 218 ~~~~l-~~~-vd~lkIgs~~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~G 276 (385)
T 3nvt_A 218 DIEVA-LDY-VDVIQIGARNMQNFELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQG 276 (385)
T ss_dssp GHHHH-TTT-CSEEEECGGGTTCHHHHHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTTT
T ss_pred HHHHH-Hhh-CCEEEECcccccCHHHHHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHcC
Confidence 44444 434 999999999999999999999999999999999999999999999998863
No 419
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=90.25 E-value=0.33 Score=44.26 Aligned_cols=42 Identities=17% Similarity=0.193 Sum_probs=33.2
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHH
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAE 47 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~ 47 (355)
+.||+|||+|.+|.. .+..+...+ .+| -++|+++++.+.+.+
T Consensus 190 ~~kV~ViG~G~iG~~-aa~~a~~lG--a~V-~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQ-AIATARRLG--AVV-SATDVRPAAKEQVAS 231 (405)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHTT--CEE-EEECSSTTHHHHHHH
T ss_pred CCEEEEECCcHHHHH-HHHHHHHCC--CEE-EEEcCCHHHHHHHHH
Confidence 359999999999985 677777765 565 578999999887764
No 420
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=90.25 E-value=0.71 Score=40.05 Aligned_cols=86 Identities=20% Similarity=0.148 Sum_probs=48.0
Q ss_pred ceEEEEec-ccccchhccchhhhcCCeEEEEEEEeCCH-------HHHHHHHHHHhhhcCCcccccc-Cc---chhhhhc
Q 018445 3 PRIAILGA-GIFVKTQYIPRLAEISDLVSLKFIWSRSE-------ESAKSAAEVARKHFADVECVWG-DN---GLEQIIK 70 (355)
Q Consensus 3 ~rigiiG~-G~~~~~~~~~~l~~~~~~~~vvai~d~~~-------~~~~~~~~~~~~~~~~~~~~~~-~~---~~~ell~ 70 (355)
++|.|+|+ |.+|.. .+..|.+.+ .+|+++ +|++ ++++.+.+. .. +++....+ .+ +++++++
T Consensus 3 ~~vlVtGatG~iG~~-l~~~L~~~g--~~V~~~-~R~~~~~~~~~~~~~~~~~l-~~--~~v~~v~~D~~d~~~l~~~~~ 75 (307)
T 2gas_A 3 NKILILGPTGAIGRH-IVWASIKAG--NPTYAL-VRKTITAANPETKEELIDNY-QS--LGVILLEGDINDHETLVKAIK 75 (307)
T ss_dssp CCEEEESTTSTTHHH-HHHHHHHHT--CCEEEE-ECCSCCSSCHHHHHHHHHHH-HH--TTCEEEECCTTCHHHHHHHHT
T ss_pred cEEEEECCCchHHHH-HHHHHHhCC--CcEEEE-ECCCcccCChHHHHHHHHHH-Hh--CCCEEEEeCCCCHHHHHHHHh
Confidence 58999996 889975 777787654 466554 5654 555443221 11 12221111 12 4555666
Q ss_pred CCCccEEEEecCCc---ccHHHHHHHHHcC
Q 018445 71 EDSILGVAVVLAGQ---AQVDTSLKLLKAG 97 (355)
Q Consensus 71 ~~~~D~V~I~tp~~---~H~~~~~~al~~G 97 (355)
. +|+|+.+.+.. ....++.+|.++|
T Consensus 76 ~--~d~vi~~a~~~~~~~~~~l~~aa~~~g 103 (307)
T 2gas_A 76 Q--VDIVICAAGRLLIEDQVKIIKAIKEAG 103 (307)
T ss_dssp T--CSEEEECSSSSCGGGHHHHHHHHHHHC
T ss_pred C--CCEEEECCcccccccHHHHHHHHHhcC
Confidence 4 99999887753 2233444444444
No 421
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=90.21 E-value=0.75 Score=39.39 Aligned_cols=75 Identities=13% Similarity=0.073 Sum_probs=45.2
Q ss_pred ceEEEEecccccchhccchhhh-cCCeEEEEEEEeCCHHHHHHHHHHHhhh-c---CCccccccCcchhhh-hcCCCccE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAE-ISDLVSLKFIWSRSEESAKSAAEVARKH-F---ADVECVWGDNGLEQI-IKEDSILG 76 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~-~~~~~~vvai~d~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~el-l~~~~~D~ 76 (355)
.+|.-|||| .|. +...+.+ .....+++++ |.+++..+.+.+..... . +.+... ..|..++ +.+..+|+
T Consensus 101 ~~vLdiG~G-~G~--~~~~l~~~~~~~~~v~~v-D~~~~~~~~a~~~~~~~~g~~~~~v~~~--~~d~~~~~~~~~~~D~ 174 (280)
T 1i9g_A 101 ARVLEAGAG-SGA--LTLSLLRAVGPAGQVISY-EQRADHAEHARRNVSGCYGQPPDNWRLV--VSDLADSELPDGSVDR 174 (280)
T ss_dssp CEEEEECCT-TSH--HHHHHHHHHCTTSEEEEE-CSCHHHHHHHHHHHHHHHTSCCTTEEEE--CSCGGGCCCCTTCEEE
T ss_pred CEEEEEccc-ccH--HHHHHHHHhCCCCEEEEE-eCCHHHHHHHHHHHHHhcCCCCCcEEEE--ECchHhcCCCCCceeE
Confidence 378999999 453 3334443 3222577655 99999988877654333 1 233222 2566655 34567999
Q ss_pred EEEecCC
Q 018445 77 VAVVLAG 83 (355)
Q Consensus 77 V~I~tp~ 83 (355)
|++..|.
T Consensus 175 v~~~~~~ 181 (280)
T 1i9g_A 175 AVLDMLA 181 (280)
T ss_dssp EEEESSC
T ss_pred EEECCcC
Confidence 9986653
No 422
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=90.15 E-value=1.2 Score=32.68 Aligned_cols=110 Identities=14% Similarity=0.091 Sum_probs=58.4
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccc-------cccCcchhhhhcC--
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVEC-------VWGDNGLEQIIKE-- 71 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ell~~-- 71 (355)
|++||.||.--..-.......+...++ ++++..+....+..+.+.+ ..|++-. .-+.+-++.+-+.
T Consensus 1 m~~~ilivdd~~~~~~~l~~~l~~~~~-~~~~~~~~~~~~a~~~~~~----~~~dlvllD~~l~~~~g~~~~~~l~~~~~ 75 (130)
T 1dz3_A 1 MSIKVCIADDNRELVSLLDEYISSQPD-MEVIGTAYNGQDCLQMLEE----KRPDILLLDIIMPHLDGLAVLERIRAGFE 75 (130)
T ss_dssp -CEEEEEECSCHHHHHHHHHHHHTSTT-EEEEEEESSHHHHHHHHHH----HCCSEEEEESCCSSSCHHHHHHHHHHHCS
T ss_pred CceEEEEEcCCHHHHHHHHHHHHhCCC-ceEEEEeCCHHHHHHHHhc----CCCCEEEEecCCCCCCHHHHHHHHHhcCC
Confidence 788999998776544423333444434 7887766654455444433 2122210 0000112333332
Q ss_pred CCccEEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHH
Q 018445 72 DSILGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSR 119 (355)
Q Consensus 72 ~~~D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~ 119 (355)
+.+-+|+++.. ...+....++++|..=|+.||+... +..+.++.
T Consensus 76 ~~~~ii~ls~~--~~~~~~~~~~~~ga~~~l~KP~~~~--~l~~~i~~ 119 (130)
T 1dz3_A 76 HQPNVIMLTAF--GQEDVTKKAVELGASYFILKPFDME--NLAHHIRQ 119 (130)
T ss_dssp SCCEEEEEEET--TCHHHHHHHHHTTCEEEEECSSCCT--THHHHHHH
T ss_pred CCCcEEEEecC--CCHHHHHHHHHcCCCEEEeCCCCHH--HHHHHHHH
Confidence 33334444433 3457778899999999999998543 34444433
No 423
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=90.13 E-value=2.3 Score=36.82 Aligned_cols=56 Identities=13% Similarity=0.045 Sum_probs=50.1
Q ss_pred hhcCCCccEEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccC
Q 018445 68 IIKEDSILGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSIC 124 (355)
Q Consensus 68 ll~~~~~D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~ 124 (355)
++++- +|++-|++.+-...++.+++.+.||+|++-++++.+++|.+..++..++.|
T Consensus 127 ~l~~~-vd~lkIgA~~~~n~~LLr~va~~gkPVilK~Gms~t~~ei~~ave~i~~~G 182 (298)
T 3fs2_A 127 AVAPV-VDVLQIPAFLCRQTDLLIAAARTGRVVNVKKGQFLAPWDMKNVLAKITESG 182 (298)
T ss_dssp HHTTT-CSEEEECGGGTTCHHHHHHHHHTTSEEEEECCTTCCGGGHHHHHHHHHTTT
T ss_pred HHHhh-CCEEEECccccCCHHHHHHHHccCCcEEEeCCCCCCHHHHHHHHHHHHHcC
Confidence 34444 999999999999999999999999999999999999999999999888864
No 424
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=90.13 E-value=0.65 Score=40.63 Aligned_cols=86 Identities=19% Similarity=0.182 Sum_probs=47.5
Q ss_pred ceEEEEec-ccccchhccchhhhcCCeEEEEEEEeCCHH-HHHHHHHHHhhhcCCcccccc-C---cchhhhhcCCCccE
Q 018445 3 PRIAILGA-GIFVKTQYIPRLAEISDLVSLKFIWSRSEE-SAKSAAEVARKHFADVECVWG-D---NGLEQIIKEDSILG 76 (355)
Q Consensus 3 ~rigiiG~-G~~~~~~~~~~l~~~~~~~~vvai~d~~~~-~~~~~~~~~~~~~~~~~~~~~-~---~~~~ell~~~~~D~ 76 (355)
.+|.|+|. |.+|.. .++.|.+.+ .+|+++ +|++. +.+.+.+. .. +++....+ . +++.++++. +|+
T Consensus 12 ~~ilVtGatG~iG~~-l~~~L~~~g--~~V~~l-~R~~~~~~~~~~~l-~~--~~v~~v~~Dl~d~~~l~~a~~~--~d~ 82 (318)
T 2r6j_A 12 SKILIFGGTGYIGNH-MVKGSLKLG--HPTYVF-TRPNSSKTTLLDEF-QS--LGAIIVKGELDEHEKLVELMKK--VDV 82 (318)
T ss_dssp CCEEEETTTSTTHHH-HHHHHHHTT--CCEEEE-ECTTCSCHHHHHHH-HH--TTCEEEECCTTCHHHHHHHHTT--CSE
T ss_pred CeEEEECCCchHHHH-HHHHHHHCC--CcEEEE-ECCCCchhhHHHHh-hc--CCCEEEEecCCCHHHHHHHHcC--CCE
Confidence 38999995 899975 778887754 566654 56553 33332211 01 12221111 1 245556654 999
Q ss_pred EEEecCCc---ccHHHHHHHHHcC
Q 018445 77 VAVVLAGQ---AQVDTSLKLLKAG 97 (355)
Q Consensus 77 V~I~tp~~---~H~~~~~~al~~G 97 (355)
|+.+++.. ....++.+|.++|
T Consensus 83 vi~~a~~~~~~~~~~l~~aa~~~g 106 (318)
T 2r6j_A 83 VISALAFPQILDQFKILEAIKVAG 106 (318)
T ss_dssp EEECCCGGGSTTHHHHHHHHHHHC
T ss_pred EEECCchhhhHHHHHHHHHHHhcC
Confidence 99887642 2344444455554
No 425
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=90.02 E-value=0.85 Score=40.84 Aligned_cols=90 Identities=19% Similarity=0.143 Sum_probs=54.5
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcC-CCccEEEEecC
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKE-DSILGVAVVLA 82 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~-~~~D~V~I~tp 82 (355)
+|.|+|+|.+|.. .+..++..+ .+|+++ ++++++.+.+.+ +. +....+.+++.+.+.+. ..+|+|+-++.
T Consensus 183 ~VlV~GaG~vG~~-a~qlak~~G--a~Vi~~-~~~~~~~~~~~~---~l--Ga~~vi~~~~~~~~~~~~~g~D~vid~~g 253 (357)
T 2cf5_A 183 RGGILGLGGVGHM-GVKIAKAMG--HHVTVI-SSSNKKREEALQ---DL--GADDYVIGSDQAKMSELADSLDYVIDTVP 253 (357)
T ss_dssp EEEEECCSHHHHH-HHHHHHHHT--CEEEEE-ESSTTHHHHHHT---TS--CCSCEEETTCHHHHHHSTTTEEEEEECCC
T ss_pred EEEEECCCHHHHH-HHHHHHHCC--CeEEEE-eCChHHHHHHHH---Hc--CCceeeccccHHHHHHhcCCCCEEEECCC
Confidence 6899999999974 565555544 577655 567777666542 23 32222212333333221 36999999998
Q ss_pred CcccHHHHHHHHHcC-CeEEE
Q 018445 83 GQAQVDTSLKLLKAG-KHVIQ 102 (355)
Q Consensus 83 ~~~H~~~~~~al~~G-khVl~ 102 (355)
.....+.+..+++.| +-|++
T Consensus 254 ~~~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 254 VHHALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp SCCCSHHHHTTEEEEEEEEEC
T ss_pred ChHHHHHHHHHhccCCEEEEe
Confidence 776666666766654 44554
No 426
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=90.00 E-value=2.9 Score=32.59 Aligned_cols=72 Identities=8% Similarity=0.020 Sum_probs=46.1
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhc-CCccccccCcchhhhhcCCCccEEEEec
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHF-ADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
.+|.=||||. |. +...+.. +. .+++++ |.+++..+.+.+...... +.+... ..|..+.+.+...|+|+...
T Consensus 37 ~~vLdiG~G~-G~--~~~~l~~-~~-~~v~~v-D~~~~~~~~a~~~~~~~~~~~~~~~--~~d~~~~~~~~~~D~i~~~~ 108 (183)
T 2yxd_A 37 DVVVDVGCGS-GG--MTVEIAK-RC-KFVYAI-DYLDGAIEVTKQNLAKFNIKNCQII--KGRAEDVLDKLEFNKAFIGG 108 (183)
T ss_dssp CEEEEESCCC-SH--HHHHHHT-TS-SEEEEE-ECSHHHHHHHHHHHHHTTCCSEEEE--ESCHHHHGGGCCCSEEEECS
T ss_pred CEEEEeCCCC-CH--HHHHHHh-cC-CeEEEE-eCCHHHHHHHHHHHHHcCCCcEEEE--ECCccccccCCCCcEEEECC
Confidence 3788899996 43 3334444 33 577665 999998888776554332 233222 25676666667799998876
Q ss_pred C
Q 018445 82 A 82 (355)
Q Consensus 82 p 82 (355)
+
T Consensus 109 ~ 109 (183)
T 2yxd_A 109 T 109 (183)
T ss_dssp C
T ss_pred c
Confidence 6
No 427
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=89.90 E-value=1.1 Score=42.91 Aligned_cols=103 Identities=12% Similarity=0.109 Sum_probs=61.6
Q ss_pred CceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcC---CCccEEE
Q 018445 2 APRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKE---DSILGVA 78 (355)
Q Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~---~~~D~V~ 78 (355)
+.+|.|+|+|..|.. .+..|.+.+ .+++ +.|.++++.+.+.+ .. +....++..+-++.|.. .+.|+|+
T Consensus 127 ~~hviI~G~g~~g~~-la~~L~~~~--~~vv-vid~~~~~~~~~~~---~~--~~~~i~Gd~~~~~~L~~a~i~~a~~vi 197 (565)
T 4gx0_A 127 RGHILIFGIDPITRT-LIRKLESRN--HLFV-VVTDNYDQALHLEE---QE--GFKVVYGSPTDAHVLAGLRVAAARSII 197 (565)
T ss_dssp CSCEEEESCCHHHHH-HHHHTTTTT--CCEE-EEESCHHHHHHHHH---SC--SSEEEESCTTCHHHHHHTTGGGCSEEE
T ss_pred CCeEEEECCChHHHH-HHHHHHHCC--CCEE-EEECCHHHHHHHHH---hc--CCeEEEeCCCCHHHHHhcCcccCCEEE
Confidence 468999999999985 777777654 3554 45999999888765 21 33334433323333332 4589998
Q ss_pred EecCCcccHHHHHHHHHc--CCeEEEecCCCCCHHHHHHHH
Q 018445 79 VVLAGQAQVDTSLKLLKA--GKHVIQEKPAAANISEIENAL 117 (355)
Q Consensus 79 I~tp~~~H~~~~~~al~~--GkhVl~EKP~a~~~~e~~~l~ 117 (355)
+ |+++..--.+...++. ..+|++. +.+.+..+.|.
T Consensus 198 ~-t~~D~~n~~~~~~ar~~~~~~iiar---~~~~~~~~~l~ 234 (565)
T 4gx0_A 198 A-NLSDPDNANLCLTVRSLCQTPIIAV---VKEPVHGELLR 234 (565)
T ss_dssp E-CSCHHHHHHHHHHHHTTCCCCEEEE---CSSGGGHHHHH
T ss_pred E-eCCcHHHHHHHHHHHHhcCceEEEE---ECCHHHHHHHH
Confidence 8 6665433233333332 4566665 55666665553
No 428
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=89.85 E-value=0.35 Score=44.24 Aligned_cols=41 Identities=12% Similarity=0.196 Sum_probs=32.1
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHH
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAE 47 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~ 47 (355)
.+|+|||+|.+|.. .+..+...+ .+ |-++|+++++++.+.+
T Consensus 173 ~~V~ViGaG~iG~~-aa~~a~~~G--a~-V~v~D~~~~~~~~~~~ 213 (401)
T 1x13_A 173 AKVMVIGAGVAGLA-AIGAANSLG--AI-VRAFDTRPEVKEQVQS 213 (401)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CE-EEEECSCGGGHHHHHH
T ss_pred CEEEEECCCHHHHH-HHHHHHHCC--CE-EEEEcCCHHHHHHHHH
Confidence 58999999999985 677777665 55 4678999998877643
No 429
>4e9i_A Glucose-6-phosphate 1-dehydrogenase; pentose phosphate pathway, alpha beta, NAD(P) rossmann-like domain, oxidoreductase; 2.85A {Trypanosoma cruzi} PDB: 4em5_A*
Probab=89.84 E-value=0.44 Score=44.71 Aligned_cols=119 Identities=16% Similarity=0.158 Sum_probs=73.1
Q ss_pred EEEEecCCcccHHHHHHHHHcC--------CeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHH--
Q 018445 76 GVAVVLAGQAQVDTSLKLLKAG--------KHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAF-- 145 (355)
Q Consensus 76 ~V~I~tp~~~H~~~~~~al~~G--------khVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~-- 145 (355)
+.+.++||..-..++...-++| .-|.+|||++.|++.|++|.+...+. +--...+|-+-..
T Consensus 167 lFYLAvPP~~F~~i~~~L~~~gl~~~~~g~~RVVIEKPFG~DL~SA~~Ln~~L~~~---------F~E~QIyRIDHYLGK 237 (541)
T 4e9i_A 167 LFYLALPPSVFVGVCRGLSKGAMQKPELGWVRLIVEKPFGRDTETSEQLSNQLKPL---------FNERQVFRIDHYLGK 237 (541)
T ss_dssp EEEECCCGGGHHHHHHHHHHHSCCCTTSCCEEEEECSCCCSSHHHHHHHHHHHTTT---------SCGGGEEECCGGGGS
T ss_pred EEEEeCCHHHHHHHHHHHHHhCCCCcCCCceEEEEeCCCCCchHhHHHHHHHHHhh---------CCHHHeecccccccH
Confidence 7889999999988888766665 26999999999999999999887764 2222233322211
Q ss_pred HHHHHHHH------------HhCCeeEEEEEEeeccCCCCCccCccccccccCccccchhh-HHHHHHHHHhCCcc
Q 018445 146 VECKKLIA------------EIGDMMSVQVIVEGSMNSSNPYFSSSWRRNFTGGFILDMGV-HFIAGLRMITGCEV 208 (355)
Q Consensus 146 ~~~k~~i~------------~iG~i~~v~~~~~~~~~~~~~~~~~~w~~~~~gg~l~d~g~-H~id~~~~l~G~~~ 208 (355)
..+++++. +=--|-+|.+.+.....- . .++..-...|++-|+.- |.+-++..+.=++|
T Consensus 238 E~VQNll~lRFaN~ifeplWNr~~Id~VQIt~aE~~Gv---e--gRggYYD~~GalRDmvQNHLlQlL~LvAMEpP 308 (541)
T 4e9i_A 238 EMVQNIIVTRFANRVFSALWNSNSIACVQITFKEKIGT---A--GRGGYFDSIGIIRDVIQNHLTQILSLLTMEKP 308 (541)
T ss_dssp HHHHTHHHHHHSCHHHHHHCSTTTEEEEEEEEECSCCC---T--TCHHHHHHHHHHHHTTTTHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHhhHhhhhhhcccCccceEEEecCCcCc---c--cccccccccchHHHHHHHHHHHHHHHHhcCCC
Confidence 12222211 124577777776532221 1 11111125588888865 87777766653343
No 430
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=89.82 E-value=1.3 Score=38.91 Aligned_cols=75 Identities=13% Similarity=0.072 Sum_probs=45.3
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhh-----h-cCCccccccCcchhhhhc--CCCc
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARK-----H-FADVECVWGDNGLEQIIK--EDSI 74 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~ell~--~~~~ 74 (355)
.||..||||.-+ ....+.+..+..++++ +|.+++..+.+.+.+.. . .+.+... ..|..+.+. +...
T Consensus 79 ~~VLdiG~G~G~---~~~~l~~~~~~~~v~~-vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~--~~D~~~~l~~~~~~f 152 (314)
T 1uir_A 79 KRVLIVGGGEGA---TLREVLKHPTVEKAVM-VDIDGELVEVAKRHMPEWHQGAFDDPRAVLV--IDDARAYLERTEERY 152 (314)
T ss_dssp CEEEEEECTTSH---HHHHHTTSTTCCEEEE-EESCHHHHHHHHHHCHHHHTTGGGCTTEEEE--ESCHHHHHHHCCCCE
T ss_pred CeEEEEcCCcCH---HHHHHHhcCCCCEEEE-EECCHHHHHHHHHHhHhhccccccCCceEEE--EchHHHHHHhcCCCc
Confidence 489999999643 2344444433246654 59999988877664322 1 1333322 256666553 4569
Q ss_pred cEEEEecCC
Q 018445 75 LGVAVVLAG 83 (355)
Q Consensus 75 D~V~I~tp~ 83 (355)
|+|++-.+.
T Consensus 153 D~Ii~d~~~ 161 (314)
T 1uir_A 153 DVVIIDLTD 161 (314)
T ss_dssp EEEEEECCC
T ss_pred cEEEECCCC
Confidence 999987654
No 431
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=89.75 E-value=1.9 Score=37.65 Aligned_cols=128 Identities=9% Similarity=0.011 Sum_probs=66.3
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh-----cCCccccccCcchhhhhc--CCCcc
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH-----FADVECVWGDNGLEQIIK--EDSIL 75 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ell~--~~~~D 75 (355)
-||..||||.-+ ....+.+..+..+++ .+|.+++..+.+.+.+... .+.+.... .|..+.+. +...|
T Consensus 97 ~~VLdiG~G~G~---~~~~l~~~~~~~~v~-~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~--~Da~~~l~~~~~~fD 170 (304)
T 2o07_A 97 RKVLIIGGGDGG---VLREVVKHPSVESVV-QCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV--GDGFEFMKQNQDAFD 170 (304)
T ss_dssp CEEEEEECTTSH---HHHHHTTCTTCCEEE-EEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE--SCHHHHHHTCSSCEE
T ss_pred CEEEEECCCchH---HHHHHHHcCCCCEEE-EEECCHHHHHHHHHHhHHhhcccCCCcEEEEE--CcHHHHHhhCCCCce
Confidence 489999999633 234444443324665 4599999888776643221 23333222 56666554 35699
Q ss_pred EEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEec-ccCchHHHHHHHHHHH
Q 018445 76 GVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAEN-YRFEPAFVECKKLIAE 154 (355)
Q Consensus 76 ~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~-~r~~p~~~~~k~~i~~ 154 (355)
+|++-.+...... ++ -.+.+-.+++.+..+. .|+.+.-..+ +........+++.+++
T Consensus 171 ~Ii~d~~~~~~~~--------------~~--l~~~~~l~~~~~~Lkp------gG~lv~~~~~~~~~~~~~~~~~~~l~~ 228 (304)
T 2o07_A 171 VIITDSSDPMGPA--------------ES--LFKESYYQLMKTALKE------DGVLCCQGECQWLHLDLIKEMRQFCQS 228 (304)
T ss_dssp EEEEECC---------------------------CHHHHHHHHHEEE------EEEEEEEEECTTTCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCcc--------------hh--hhHHHHHHHHHhccCC------CeEEEEecCCcccchHHHHHHHHHHHH
Confidence 9998655322100 00 0112224445555555 4555544433 2333455677777776
Q ss_pred -hCCe
Q 018445 155 -IGDM 158 (355)
Q Consensus 155 -iG~i 158 (355)
+..+
T Consensus 229 ~f~~v 233 (304)
T 2o07_A 229 LFPVV 233 (304)
T ss_dssp HCSEE
T ss_pred hCCCc
Confidence 5544
No 432
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=89.58 E-value=1 Score=41.91 Aligned_cols=83 Identities=17% Similarity=0.102 Sum_probs=50.9
Q ss_pred eEEEEec-ccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCc--ch---------------
Q 018445 4 RIAILGA-GIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDN--GL--------------- 65 (355)
Q Consensus 4 rigiiG~-G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--------------- 65 (355)
+|.|+|+ |.+|.. .+..++..+ .+++++. +++++.+.+.+ . ++...+.+. ++
T Consensus 231 ~VlV~GasG~vG~~-avqlak~~G--a~vi~~~-~~~~~~~~~~~----l--Ga~~vi~~~~~d~~~~~~~~~~~~~~~~ 300 (456)
T 3krt_A 231 NVLIWGASGGLGSY-ATQFALAGG--ANPICVV-SSPQKAEICRA----M--GAEAIIDRNAEGYRFWKDENTQDPKEWK 300 (456)
T ss_dssp EEEETTTTSHHHHH-HHHHHHHTT--CEEEEEE-SSHHHHHHHHH----H--TCCEEEETTTTTCCSEEETTEECHHHHH
T ss_pred EEEEECCCCHHHHH-HHHHHHHcC--CeEEEEE-CCHHHHHHHHh----h--CCcEEEecCcCcccccccccccchHHHH
Confidence 6899998 999974 555555543 6887765 68888877654 2 221111111 11
Q ss_pred ---hhh---hcCCCccEEEEecCCcccHHHHHHHHHcC
Q 018445 66 ---EQI---IKEDSILGVAVVLAGQAQVDTSLKLLKAG 97 (355)
Q Consensus 66 ---~el---l~~~~~D~V~I~tp~~~H~~~~~~al~~G 97 (355)
+++ .....+|+|+-++.. ..+..+..+++.|
T Consensus 301 ~~~~~i~~~t~g~g~Dvvid~~G~-~~~~~~~~~l~~~ 337 (456)
T 3krt_A 301 RFGKRIRELTGGEDIDIVFEHPGR-ETFGASVFVTRKG 337 (456)
T ss_dssp HHHHHHHHHHTSCCEEEEEECSCH-HHHHHHHHHEEEE
T ss_pred HHHHHHHHHhCCCCCcEEEEcCCc-hhHHHHHHHhhCC
Confidence 222 223579999999887 5666666666655
No 433
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=89.55 E-value=0.11 Score=44.94 Aligned_cols=111 Identities=19% Similarity=0.186 Sum_probs=62.0
Q ss_pred CC-ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh-cCCccccccCcchhhhhcCCCccEEE
Q 018445 1 MA-PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH-FADVECVWGDNGLEQIIKEDSILGVA 78 (355)
Q Consensus 1 m~-~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ell~~~~~D~V~ 78 (355)
|+ +||.|+|+|.+|.. .+..|.+.+ .+|+++ ++++++.. ... .. ..++.. .++++++++ .++|+|+
T Consensus 1 M~~~~ilVtGaG~iG~~-l~~~L~~~g--~~V~~~-~r~~~~~~---~~~-~~~~~Dl~d---~~~~~~~~~-~~~d~vi 68 (286)
T 3gpi_A 1 MSLSKILIAGCGDLGLE-LARRLTAQG--HEVTGL-RRSAQPMP---AGV-QTLIADVTR---PDTLASIVH-LRPEILV 68 (286)
T ss_dssp -CCCCEEEECCSHHHHH-HHHHHHHTT--CCEEEE-ECTTSCCC---TTC-CEEECCTTC---GGGCTTGGG-GCCSEEE
T ss_pred CCCCcEEEECCCHHHHH-HHHHHHHCC--CEEEEE-eCCccccc---cCC-ceEEccCCC---hHHHHHhhc-CCCCEEE
Confidence 65 49999999999985 777787654 577666 45544321 000 00 001110 134555665 2599998
Q ss_pred EecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccC
Q 018445 79 VVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRF 141 (355)
Q Consensus 79 I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~ 141 (355)
-+.... ... -++-+..++.....|++++++.+ .+..++++...-|
T Consensus 69 h~a~~~----------~~~----~~~~~~~n~~~~~~ll~a~~~~~----~~~~v~~SS~~vy 113 (286)
T 3gpi_A 69 YCVAAS----------EYS----DEHYRLSYVEGLRNTLSALEGAP----LQHVFFVSSTGVY 113 (286)
T ss_dssp ECHHHH----------HHC---------CCSHHHHHHHHHHTTTSC----CCEEEEEEEGGGC
T ss_pred EeCCCC----------CCC----HHHHHHHHHHHHHHHHHHHhhCC----CCEEEEEcccEEE
Confidence 775421 011 13344568888999999999852 1345666654443
No 434
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=89.54 E-value=0.38 Score=41.36 Aligned_cols=63 Identities=17% Similarity=0.169 Sum_probs=39.9
Q ss_pred CCceEEEEe-cccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEE
Q 018445 1 MAPRIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAV 79 (355)
Q Consensus 1 m~~rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I 79 (355)
|+|||.|+| +|.+|.. .+..|.+.+ .+|+++ ++.+ . ++... +++++++++.++|+|+-
T Consensus 4 M~m~ilVtGatG~iG~~-l~~~L~~~g--~~V~~~-~r~~------------~--D~~d~---~~~~~~~~~~~~d~vi~ 62 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQ-LQEELNPEE--YDIYPF-DKKL------------L--DITNI---SQVQQVVQEIRPHIIIH 62 (287)
T ss_dssp -CEEEEEESTTSHHHHH-HHHHSCTTT--EEEEEE-CTTT------------S--CTTCH---HHHHHHHHHHCCSEEEE
T ss_pred ceeEEEEECCCCHHHHH-HHHHHHhCC--CEEEEe-cccc------------c--CCCCH---HHHHHHHHhcCCCEEEE
Confidence 778999999 5889974 677777653 688766 4411 1 22111 45666776546899987
Q ss_pred ecCCc
Q 018445 80 VLAGQ 84 (355)
Q Consensus 80 ~tp~~ 84 (355)
+....
T Consensus 63 ~a~~~ 67 (287)
T 3sc6_A 63 CAAYT 67 (287)
T ss_dssp CCCCC
T ss_pred CCccc
Confidence 75443
No 435
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=89.54 E-value=0.4 Score=42.85 Aligned_cols=77 Identities=12% Similarity=0.026 Sum_probs=43.4
Q ss_pred CceEEEEec-ccccchhccchhhhcC----CeEEEEEEEeCCHHH--HHHHHHHHhh-hcCCccccccCcchhhhhcCCC
Q 018445 2 APRIAILGA-GIFVKTQYIPRLAEIS----DLVSLKFIWSRSEES--AKSAAEVARK-HFADVECVWGDNGLEQIIKEDS 73 (355)
Q Consensus 2 ~~rigiiG~-G~~~~~~~~~~l~~~~----~~~~vvai~d~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~ell~~~~ 73 (355)
++||+|+|+ |.+|.. .+..|...+ +...-+.++|..+.. ++-.+-.... .+|.....+..++..+.+++
T Consensus 24 ~vKVaViGAaG~IG~~-la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~a~~~-- 100 (345)
T 4h7p_A 24 AVKVAVTGAAGQIGYA-LVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPRVAFDG-- 100 (345)
T ss_dssp CEEEEEESTTSHHHHH-HHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHHHTTT--
T ss_pred CCEEEEECcCcHHHHH-HHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChHHHhCC--
Confidence 469999996 999975 454444322 111234788987643 2322221111 23333333333667777776
Q ss_pred ccEEEEec
Q 018445 74 ILGVAVVL 81 (355)
Q Consensus 74 ~D~V~I~t 81 (355)
.|+|+|+.
T Consensus 101 advVvi~a 108 (345)
T 4h7p_A 101 VAIAIMCG 108 (345)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 89999985
No 436
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=89.40 E-value=3.7 Score=35.54 Aligned_cols=56 Identities=14% Similarity=0.110 Sum_probs=50.3
Q ss_pred hhcCCCccEEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccC
Q 018445 68 IIKEDSILGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSIC 124 (355)
Q Consensus 68 ll~~~~~D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~ 124 (355)
++++ .+|+.-|++..-...++.+++.+.||+|++-++++.+++|....++..+..|
T Consensus 104 ~l~~-~vd~~kIgA~~~~n~~Ll~~~a~~~kPV~lk~G~~~t~~ei~~Av~~i~~~G 159 (292)
T 1o60_A 104 PVAD-VVDIIQLPAFLARQTDLVEAMAKTGAVINVKKPQFLSPSQMGNIVEKIEECG 159 (292)
T ss_dssp HHHT-TCSEEEECGGGTTCHHHHHHHHHTTCEEEEECCTTSCGGGHHHHHHHHHHTT
T ss_pred HHHh-cCCEEEECcccccCHHHHHHHHcCCCcEEEeCCCCCCHHHHHHHHHHHHHcC
Confidence 3444 5999999999999999999999999999999999999999999999988864
No 437
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=89.38 E-value=0.49 Score=40.99 Aligned_cols=74 Identities=19% Similarity=0.122 Sum_probs=48.2
Q ss_pred eEEEEe-cccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccc-cCcc---hhhhhcCCCccEEE
Q 018445 4 RIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVW-GDNG---LEQIIKEDSILGVA 78 (355)
Q Consensus 4 rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~ell~~~~~D~V~ 78 (355)
++.|+| +|.+|+. ....|.+.+ .+ +.++++++++++.+++...... ++.... ..++ +++++++ +|+|+
T Consensus 121 ~vlVtGaaGGiG~a-ia~~L~~~G--~~-V~i~~R~~~~~~~l~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~--~DvlV 193 (287)
T 1lu9_A 121 KAVVLAGTGPVGMR-SAALLAGEG--AE-VVLCGRKLDKAQAAADSVNKRF-KVNVTAAETADDASRAEAVKG--AHFVF 193 (287)
T ss_dssp EEEEETCSSHHHHH-HHHHHHHTT--CE-EEEEESSHHHHHHHHHHHHHHH-TCCCEEEECCSHHHHHHHTTT--CSEEE
T ss_pred EEEEECCCcHHHHH-HHHHHHHCc--CE-EEEEECCHHHHHHHHHHHHhcC-CcEEEEecCCCHHHHHHHHHh--CCEEE
Confidence 688999 8999975 677777764 57 5788999999888776442211 211110 0123 4555654 89999
Q ss_pred EecCCc
Q 018445 79 VVLAGQ 84 (355)
Q Consensus 79 I~tp~~ 84 (355)
.+++..
T Consensus 194 n~ag~g 199 (287)
T 1lu9_A 194 TAGAIG 199 (287)
T ss_dssp ECCCTT
T ss_pred ECCCcc
Confidence 999754
No 438
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=89.35 E-value=1.6 Score=39.82 Aligned_cols=102 Identities=10% Similarity=0.071 Sum_probs=65.6
Q ss_pred ceEEEEecccccchhccchhhh-cCCeEEEEEEEeC----------CHHHHHHHHHHHhh--hcCCccccccCcchhhhh
Q 018445 3 PRIAILGAGIFVKTQYIPRLAE-ISDLVSLKFIWSR----------SEESAKSAAEVARK--HFADVECVWGDNGLEQII 69 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~-~~~~~~vvai~d~----------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ell 69 (355)
.||+|.|.|..|.. .+..|.+ .+ .+|++++|. +++.+..+.+.... .+++. .+ -+.++++
T Consensus 210 ~~vaVqG~GnVG~~-~a~~L~e~~G--akvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a--~~--~~~~eil 282 (415)
T 2tmg_A 210 ATVAVQGFGNVGQF-AALLISQELG--SKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKG--ER--ITNEELL 282 (415)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTC--CEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSS--EE--ECHHHHT
T ss_pred CEEEEECCcHHHHH-HHHHHHHhcC--CEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCc--eE--cCchhhh
Confidence 58999999999974 5555655 43 899999998 77777777653110 11221 11 2457777
Q ss_pred cCCCccEEEEecCC-cccHHHHHHHHHcCCeEEEec---CCCCCHHHHHHHHH
Q 018445 70 KEDSILGVAVVLAG-QAQVDTSLKLLKAGKHVIQEK---PAAANISEIENALS 118 (355)
Q Consensus 70 ~~~~~D~V~I~tp~-~~H~~~~~~al~~GkhVl~EK---P~a~~~~e~~~l~~ 118 (355)
+ .++|+++=|+.. ..+.+-+.. -+..+++|= |++ .++.++++
T Consensus 283 ~-~~~DIliP~A~~n~i~~~~a~~---l~ak~V~EgAN~p~t---~~a~~~l~ 328 (415)
T 2tmg_A 283 E-LDVDILVPAALEGAIHAGNAER---IKAKAVVEGANGPTT---PEADEILS 328 (415)
T ss_dssp T-CSCSEEEECSSTTSBCHHHHTT---CCCSEEECCSSSCBC---HHHHHHHH
T ss_pred c-CCCcEEEecCCcCccCcccHHH---cCCeEEEeCCCcccC---HHHHHHHH
Confidence 6 569999987544 455554444 366788887 543 55666543
No 439
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=89.31 E-value=0.53 Score=38.93 Aligned_cols=77 Identities=10% Similarity=0.020 Sum_probs=40.7
Q ss_pred CCceEEEEeccc--ccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccC-----------cchhh
Q 018445 1 MAPRIAILGAGI--FVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGD-----------NGLEQ 67 (355)
Q Consensus 1 m~~rigiiG~G~--~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~e 67 (355)
|++||+|...|+ -... .+..+.. .-.++|++|+...+......++ ++ +++..... ..+.+
T Consensus 11 ~~~ri~vl~SG~gsnl~a-ll~~~~~-~~~~eI~~Vis~~~a~~~~~A~---~~--gIp~~~~~~~~~~~r~~~d~~~~~ 83 (215)
T 3da8_A 11 APARLVVLASGTGSLLRS-LLDAAVG-DYPARVVAVGVDRECRAAEIAA---EA--SVPVFTVRLADHPSRDAWDVAITA 83 (215)
T ss_dssp SSEEEEEEESSCCHHHHH-HHHHSST-TCSEEEEEEEESSCCHHHHHHH---HT--TCCEEECCGGGSSSHHHHHHHHHH
T ss_pred CCcEEEEEEeCChHHHHH-HHHHHhc-cCCCeEEEEEeCCchHHHHHHH---Hc--CCCEEEeCcccccchhhhhHHHHH
Confidence 467999995554 2221 2233222 1126888877654433434443 34 45433210 12345
Q ss_pred hhcCCCccEEEEecCCc
Q 018445 68 IIKEDSILGVAVVLAGQ 84 (355)
Q Consensus 68 ll~~~~~D~V~I~tp~~ 84 (355)
.|++.++|+++++.-..
T Consensus 84 ~l~~~~~Dlivlagy~~ 100 (215)
T 3da8_A 84 ATAAHEPDLVVSAGFMR 100 (215)
T ss_dssp HHHTTCCSEEEEEECCS
T ss_pred HHHhhCCCEEEEcCchh
Confidence 56677899888875443
No 440
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=89.17 E-value=2.4 Score=36.93 Aligned_cols=75 Identities=8% Similarity=0.019 Sum_probs=45.1
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhh-----hcCCccccccCcchhhhhc---CCCc
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARK-----HFADVECVWGDNGLEQIIK---EDSI 74 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ell~---~~~~ 74 (355)
.||..||||.-+ .+..+.+..+..+++ .+|.+++..+.+.+.+.. ..+.+... ..|..+++. +...
T Consensus 97 ~~VLdiG~G~G~---~~~~l~~~~~~~~v~-~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~--~~D~~~~~~~~~~~~f 170 (304)
T 3bwc_A 97 ERVLIIGGGDGG---VLREVLRHGTVEHCD-LVDIDGEVMEQSKQHFPQISRSLADPRATVR--VGDGLAFVRQTPDNTY 170 (304)
T ss_dssp CEEEEEECTTSH---HHHHHHTCTTCCEEE-EEESCHHHHHHHHHHCHHHHGGGGCTTEEEE--ESCHHHHHHSSCTTCE
T ss_pred CeEEEEcCCCCH---HHHHHHhCCCCCEEE-EEECCHHHHHHHHHHhHHhhcccCCCcEEEE--ECcHHHHHHhccCCce
Confidence 489999999633 344444443324665 459999888777654311 11233322 267777764 4679
Q ss_pred cEEEEecCC
Q 018445 75 LGVAVVLAG 83 (355)
Q Consensus 75 D~V~I~tp~ 83 (355)
|+|++-.+.
T Consensus 171 DvIi~d~~~ 179 (304)
T 3bwc_A 171 DVVIIDTTD 179 (304)
T ss_dssp EEEEEECC-
T ss_pred eEEEECCCC
Confidence 999986554
No 441
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=88.99 E-value=0.63 Score=41.73 Aligned_cols=83 Identities=16% Similarity=0.127 Sum_probs=50.3
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCc---chhhhhcCCCccEEEEe
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDN---GLEQIIKEDSILGVAVV 80 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ell~~~~~D~V~I~ 80 (355)
+|.|+|+|.+|.. .+..++..+ .+|+++ ++++++.+.+.+ . +....+.++ ++.+-+. ..+|+|+.+
T Consensus 182 ~VlV~GaG~vG~~-~~qlak~~G--a~Vi~~-~~~~~~~~~~~~----l--Ga~~v~~~~~~~~~~~~~~-~~~D~vid~ 250 (360)
T 1piw_A 182 KVGIVGLGGIGSM-GTLISKAMG--AETYVI-SRSSRKREDAMK----M--GADHYIATLEEGDWGEKYF-DTFDLIVVC 250 (360)
T ss_dssp EEEEECCSHHHHH-HHHHHHHHT--CEEEEE-ESSSTTHHHHHH----H--TCSEEEEGGGTSCHHHHSC-SCEEEEEEC
T ss_pred EEEEECCCHHHHH-HHHHHHHCC--CEEEEE-cCCHHHHHHHHH----c--CCCEEEcCcCchHHHHHhh-cCCCEEEEC
Confidence 7999999999974 565555554 576554 667777766544 2 222221111 3323233 469999999
Q ss_pred cCC--cccHHHHHHHHHcC
Q 018445 81 LAG--QAQVDTSLKLLKAG 97 (355)
Q Consensus 81 tp~--~~H~~~~~~al~~G 97 (355)
+.. ....+.+..+++.|
T Consensus 251 ~g~~~~~~~~~~~~~l~~~ 269 (360)
T 1piw_A 251 ASSLTDIDFNIMPKAMKVG 269 (360)
T ss_dssp CSCSTTCCTTTGGGGEEEE
T ss_pred CCCCcHHHHHHHHHHhcCC
Confidence 987 55555555666554
No 442
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=88.96 E-value=0.61 Score=41.03 Aligned_cols=76 Identities=14% Similarity=0.093 Sum_probs=41.1
Q ss_pred ceEEEEe-cccccchhccchhhhc-CCeEEEEEEEeCCHHHHHHHHHHHhhhcCC-cccc-ccCcchhhhhcCCCccEEE
Q 018445 3 PRIAILG-AGIFVKTQYIPRLAEI-SDLVSLKFIWSRSEESAKSAAEVARKHFAD-VECV-WGDNGLEQIIKEDSILGVA 78 (355)
Q Consensus 3 ~rigiiG-~G~~~~~~~~~~l~~~-~~~~~vvai~d~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~ell~~~~~D~V~ 78 (355)
|||+||| +|.+|.. .+..|... +- ..-+.++|+++ +++..+-.+. +.+. .... +..++..+.+++ .|+|+
T Consensus 1 mKV~IiGAaG~VG~~-~a~~L~~~~~~-~~el~L~Di~~-~~~G~a~Dl~-~~~~~~~v~~~~~~~~~~~~~~--aDivi 74 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQA-LALLLKTQLPS-GSELSLYDIAP-VTPGVAVDLS-HIPTAVKIKGFSGEDATPALEG--ADVVL 74 (312)
T ss_dssp CEEEEETTTSHHHHH-HHHHHHHHSCT-TEEEEEECSST-THHHHHHHHH-TSCSSEEEEEECSSCCHHHHTT--CSEEE
T ss_pred CEEEEECCCCHHHHH-HHHHHHhCCCC-CceEEEEecCC-CchhHHHHhh-CCCCCceEEEecCCCcHHHhCC--CCEEE
Confidence 6999999 8999985 66666543 32 23346779887 3332221111 2221 1111 000133444454 89999
Q ss_pred EecCCc
Q 018445 79 VVLAGQ 84 (355)
Q Consensus 79 I~tp~~ 84 (355)
|+.+..
T Consensus 75 i~ag~~ 80 (312)
T 3hhp_A 75 ISAGVA 80 (312)
T ss_dssp ECCSCS
T ss_pred EeCCCC
Confidence 987443
No 443
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=88.83 E-value=5.7 Score=34.13 Aligned_cols=76 Identities=11% Similarity=0.084 Sum_probs=45.1
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh-----cCCccccccCcchhhhhc--CCCcc
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH-----FADVECVWGDNGLEQIIK--EDSIL 75 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ell~--~~~~D 75 (355)
-||.+||||.-+ .+..+.+..+..+++ .+|.+++..+.+.+.+... .+.+... ..|..+.+. ....|
T Consensus 80 ~~VLdiG~G~G~---~~~~l~~~~~~~~v~-~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~--~~D~~~~l~~~~~~fD 153 (283)
T 2i7c_A 80 KNVLVVGGGDGG---IIRELCKYKSVENID-ICEIDETVIEVSKIYFKNISCGYEDKRVNVF--IEDASKFLENVTNTYD 153 (283)
T ss_dssp CEEEEEECTTSH---HHHHHTTCTTCCEEE-EEESCHHHHHHHHHHCTTTSGGGGSTTEEEE--ESCHHHHHHHCCSCEE
T ss_pred CeEEEEeCCcCH---HHHHHHHcCCCCEEE-EEECCHHHHHHHHHHhHHhccccCCCcEEEE--ECChHHHHHhCCCCce
Confidence 489999999644 234444443324554 5599999888777643221 1233222 256666553 35699
Q ss_pred EEEEecCCc
Q 018445 76 GVAVVLAGQ 84 (355)
Q Consensus 76 ~V~I~tp~~ 84 (355)
+|++-.+..
T Consensus 154 ~Ii~d~~~~ 162 (283)
T 2i7c_A 154 VIIVDSSDP 162 (283)
T ss_dssp EEEEECCCT
T ss_pred EEEEcCCCC
Confidence 999865543
No 444
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=88.83 E-value=0.53 Score=42.49 Aligned_cols=130 Identities=16% Similarity=0.079 Sum_probs=74.0
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccc--cCcchhhhhcC------CCcc
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVW--GDNGLEQIIKE------DSIL 75 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ell~~------~~~D 75 (355)
+|.|+|+|.+|.. .+..++..+ +..+.++++++++.+.+.+ . ++...+ ...++.+.+.+ ..+|
T Consensus 185 ~VlV~GaG~vG~~-aiqlak~~G--a~~Vi~~~~~~~~~~~a~~----l--Ga~~vi~~~~~~~~~~i~~~~~~~~gg~D 255 (370)
T 4ej6_A 185 TVAILGGGVIGLL-TVQLARLAG--ATTVILSTRQATKRRLAEE----V--GATATVDPSAGDVVEAIAGPVGLVPGGVD 255 (370)
T ss_dssp EEEEECCSHHHHH-HHHHHHHTT--CSEEEEECSCHHHHHHHHH----H--TCSEEECTTSSCHHHHHHSTTSSSTTCEE
T ss_pred EEEEECCCHHHHH-HHHHHHHcC--CCEEEEECCCHHHHHHHHH----c--CCCEEECCCCcCHHHHHHhhhhccCCCCC
Confidence 6899999999974 555555543 5333456888888776554 3 222221 11344443332 3699
Q ss_pred EEEEecCCcccHHHHHHHHHcC-CeEEEec-----CCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHH
Q 018445 76 GVAVVLAGQAQVDTSLKLLKAG-KHVIQEK-----PAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECK 149 (355)
Q Consensus 76 ~V~I~tp~~~H~~~~~~al~~G-khVl~EK-----P~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k 149 (355)
+|+-++......+.+..+++.| +-|++-- ++..+.. .+..+ ++.+.-.+ .+...+..+.
T Consensus 256 vvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~------~~~~~-------~~~i~g~~--~~~~~~~~~~ 320 (370)
T 4ej6_A 256 VVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPF------DILFR-------ELRVLGSF--INPFVHRRAA 320 (370)
T ss_dssp EEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHH------HHHHT-------TCEEEECC--SCTTCHHHHH
T ss_pred EEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHH------HHHhC-------CcEEEEec--cChHHHHHHH
Confidence 9999998776777777777765 4444432 3333332 22223 43343322 2334567777
Q ss_pred HHHHHhCCe
Q 018445 150 KLIAEIGDM 158 (355)
Q Consensus 150 ~~i~~iG~i 158 (355)
+++++ |++
T Consensus 321 ~l~~~-g~i 328 (370)
T 4ej6_A 321 DLVAT-GAI 328 (370)
T ss_dssp HHHHT-TCS
T ss_pred HHHHc-CCC
Confidence 77776 554
No 445
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=88.78 E-value=0.61 Score=46.49 Aligned_cols=60 Identities=3% Similarity=0.063 Sum_probs=47.4
Q ss_pred cchhhhhcC-CCccEEEEecCCcccHHHHHHHHH-cCCe-EEEecCCCCCHHHHHHHHHHhhcc
Q 018445 63 NGLEQIIKE-DSILGVAVVLAGQAQVDTSLKLLK-AGKH-VIQEKPAAANISEIENALSRYNSI 123 (355)
Q Consensus 63 ~~~~ell~~-~~~D~V~I~tp~~~H~~~~~~al~-~Gkh-Vl~EKP~a~~~~e~~~l~~~a~~~ 123 (355)
.|++|+.+. +++|+++|++|+..=.+.+.+|++ +|.. +.|= --.....+.++|.++|+++
T Consensus 554 ~sv~ea~~~~p~~DlaVI~vP~~~v~~av~ea~~~~Gvk~~Vii-s~Gf~e~~~~~l~~~A~~~ 616 (829)
T 3pff_A 554 KNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAII-AEGIPEALTRKLIKKADQK 616 (829)
T ss_dssp SSHHHHHHHCTTCCEEEECCCTTTHHHHHHHHTTSTTCCEEEEC-CSCCCHHHHHHHHHHHHHH
T ss_pred CcHHHHhhccCCCcEEEEeCCHHHHHHHHHHHHhhCCCCEEEEe-CCCCCHHHHHHHHHHHHHc
Confidence 899999875 479999999999999999999999 9955 3331 1133345678899999994
No 446
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=88.77 E-value=2.6 Score=36.18 Aligned_cols=59 Identities=10% Similarity=0.015 Sum_probs=51.8
Q ss_pred chhhhhcCCCccEEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccC
Q 018445 64 GLEQIIKEDSILGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSIC 124 (355)
Q Consensus 64 ~~~ell~~~~~D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~ 124 (355)
+.+.+.+ - +|+.-|++.+-.+.++.+++.+.||+|++-++++.|++|....++..+..|
T Consensus 114 ~~~~l~~-~-vd~~kIgs~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~ei~~Ave~i~~~G 172 (276)
T 1vs1_A 114 HVETVSR-Y-ADMLQIGARNMQNFPLLREVGRSGKPVLLKRGFGNTVEELLAAAEYILLEG 172 (276)
T ss_dssp GHHHHHH-H-CSEEEECGGGTTCHHHHHHHHHHTCCEEEECCTTCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHH-h-CCeEEECcccccCHHHHHHHHccCCeEEEcCCCCCCHHHHHHHHHHHHHcC
Confidence 4444444 4 899999999999999999999999999999999999999999999888863
No 447
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=88.74 E-value=2.9 Score=36.03 Aligned_cols=51 Identities=18% Similarity=0.181 Sum_probs=47.8
Q ss_pred ccEEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccC
Q 018445 74 ILGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSIC 124 (355)
Q Consensus 74 ~D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~ 124 (355)
+|++-|++....+.++.+++.+.||+|.+-++++.+++|....++..+..|
T Consensus 106 ~d~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~A~~~i~~~G 156 (280)
T 2qkf_A 106 CDVIQLPAFLARQTDLVVAMAKTGNVVNIKKPQFLSPSQMKNIVEKFHEAG 156 (280)
T ss_dssp CSEEEECGGGTTBHHHHHHHHHTCCEEEEECCTTSCGGGHHHHHHHHHHTT
T ss_pred CCEEEECcccccCHHHHHHHHcCCCcEEEECCCCCCHHHHHHHHHHHHHcC
Confidence 899999999999999999999999999999999999999999999988864
No 448
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=88.44 E-value=0.6 Score=41.41 Aligned_cols=72 Identities=13% Similarity=0.065 Sum_probs=42.2
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeC-C----HHHHHHHHHHHhhhcCCccccccC---------cchh
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSR-S----EESAKSAAEVARKHFADVECVWGD---------NGLE 66 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~-~----~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 66 (355)
|+|||+++|...++.. .+..|.+.+ .+|++|+.. + +...+..++ +. +++..... ..+-
T Consensus 21 ~~mrIvf~G~~~fa~~-~L~~L~~~~--~~i~~Vvt~pd~~~~~~~v~~~A~---~~--gIpv~~~~~~~~~~~~~~~~~ 92 (329)
T 2bw0_A 21 QSMKIAVIGQSLFGQE-VYCHLRKEG--HEVVGVFTVPDKDGKADPLGLEAE---KD--GVPVFKYSRWRAKGQALPDVV 92 (329)
T ss_dssp CCCEEEEECCHHHHHH-HHHHHHHTT--CEEEEEEECCCCSSCCCHHHHHHH---HH--TCCEEECSCCEETTEECHHHH
T ss_pred CCCEEEEEcCcHHHHH-HHHHHHHCC--CeEEEEEeCCCcCCCCCHHHHHHH---Hc--CCCEEecCcccccccccHHHH
Confidence 6799999998877753 566776543 689998862 1 122333333 33 44432210 1123
Q ss_pred hhhcCCCccEEEEe
Q 018445 67 QIIKEDSILGVAVV 80 (355)
Q Consensus 67 ell~~~~~D~V~I~ 80 (355)
+.|...++|+++++
T Consensus 93 ~~l~~~~~Dliv~a 106 (329)
T 2bw0_A 93 AKYQALGAELNVLP 106 (329)
T ss_dssp HHHHTTCCSEEEES
T ss_pred HHHHhcCCCEEEEe
Confidence 34556778988876
No 449
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=88.30 E-value=4.4 Score=37.53 Aligned_cols=117 Identities=12% Similarity=0.122 Sum_probs=75.6
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEe----------CCHHHHHHHHHHHhhh------c----CCccccccC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWS----------RSEESAKSAAEVARKH------F----ADVECVWGD 62 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d----------~~~~~~~~~~~~~~~~------~----~~~~~~~~~ 62 (355)
.||+|-|.|+.|.. .+..|.+.+ .+||+|+| .+++..+.+.+.-... + |+. .+
T Consensus 253 ~~vaVqG~GnVG~~-~a~~L~~~G--akvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~~a--~~-- 325 (470)
T 2bma_A 253 QTAVVSGSGNVALY-CVQKLLHLN--VKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTA--KY-- 325 (470)
T ss_dssp CEEEEECSSHHHHH-HHHHHHHTT--CEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCSSC--EE--
T ss_pred CEEEEECCcHHHHH-HHHHHHHCC--CEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcCCc--EE--
Confidence 48999999999974 556666654 79999999 4666666654421111 1 111 11
Q ss_pred cchhhhhcCCCccEEEEe-cCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEE
Q 018445 63 NGLEQIIKEDSILGVAVV-LAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVA 136 (355)
Q Consensus 63 ~~~~ell~~~~~D~V~I~-tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~ 136 (355)
-+.+++++ .++|+.+=| +++..+.+-+...++.+..+++|=-=..+..++.+++ ++ +|+.+...
T Consensus 326 v~~~~~~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak~V~EgAN~p~T~eA~~~L---~~------rGIl~~PD 390 (470)
T 2bma_A 326 FPNEKPWG-VPCTLAFPCATQNDVDLDQAKLLQKNGCILVGEGANMPSTVDAINLF---KS------NNIIYCPS 390 (470)
T ss_dssp CSSCCTTS-SCCSEEEECSSTTCBCSHHHHHHHHTTCCEEECCSSSCBCHHHHHHH---HH------TTCEEECH
T ss_pred ecCcCeee-cCccEEEeccccCcCCHHHHHHHHhcCcEEEEeCCCCCCCHHHHHHH---HH------CCcEEECh
Confidence 12256664 578998865 5777899999998889999999973222333444443 33 37777643
No 450
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=88.27 E-value=3.1 Score=37.50 Aligned_cols=57 Identities=11% Similarity=0.111 Sum_probs=51.9
Q ss_pred hhhcCCCccEEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccC
Q 018445 67 QIIKEDSILGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSIC 124 (355)
Q Consensus 67 ell~~~~~D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~ 124 (355)
++|++-++|+.=|++.+-.++++.+++.+.||+|++=.-++ |++|....++..++.|
T Consensus 128 d~l~~~~vd~~KIgS~~~~N~pLL~~va~~gKPViLStGma-Tl~Ei~~Ave~i~~~G 184 (385)
T 1vli_A 128 DLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMIFSTAGA-EISDVHEAWRTIRAEG 184 (385)
T ss_dssp HHHHTTCCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTC-CHHHHHHHHHHHHTTT
T ss_pred HHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCC-CHHHHHHHHHHHHHCC
Confidence 45666678999999999999999999999999999999998 9999999999999863
No 451
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=88.21 E-value=0.63 Score=38.56 Aligned_cols=74 Identities=20% Similarity=0.241 Sum_probs=40.7
Q ss_pred ceEEEE--ecccccchhccchhhhcCCeEEEEEEEeCCH-HHHHHHHHHHhhhcCCccccccC-cc----------hhhh
Q 018445 3 PRIAIL--GAGIFVKTQYIPRLAEISDLVSLKFIWSRSE-ESAKSAAEVARKHFADVECVWGD-NG----------LEQI 68 (355)
Q Consensus 3 ~rigii--G~G~~~~~~~~~~l~~~~~~~~vvai~d~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~----------~~el 68 (355)
+||+++ |.|..... .+..+.+..-.++|++|+...+ ......++ +. +++..+.. .+ +.+.
T Consensus 2 ~rI~vl~SG~g~~~~~-~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~---~~--gIp~~~~~~~~~~~r~~~~~~~~~~ 75 (216)
T 2ywr_A 2 LKIGVLVSGRGSNLQA-IIDAIESGKVNASIELVISDNPKAYAIERCK---KH--NVECKVIQRKEFPSKKEFEERMALE 75 (216)
T ss_dssp EEEEEEECSCCHHHHH-HHHHHHTTSSCEEEEEEEESCTTCHHHHHHH---HH--TCCEEECCGGGSSSHHHHHHHHHHH
T ss_pred CEEEEEEeCCcHHHHH-HHHHHHhCCCCCeEEEEEeCCCChHHHHHHH---Hc--CCCEEEeCcccccchhhhhHHHHHH
Confidence 599999 77765553 5566654331268888776533 33334443 33 45433210 11 2244
Q ss_pred hcCCCccEEEEecC
Q 018445 69 IKEDSILGVAVVLA 82 (355)
Q Consensus 69 l~~~~~D~V~I~tp 82 (355)
|+..++|+++++.-
T Consensus 76 l~~~~~Dliv~a~y 89 (216)
T 2ywr_A 76 LKKKGVELVVLAGF 89 (216)
T ss_dssp HHHTTCCEEEESSC
T ss_pred HHhcCCCEEEEeCc
Confidence 55567888887644
No 452
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=88.20 E-value=0.99 Score=40.28 Aligned_cols=129 Identities=10% Similarity=0.119 Sum_probs=72.0
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCc---c-hhhhhc------CCC
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDN---G-LEQIIK------EDS 73 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~ell~------~~~ 73 (355)
+|.|+|+|.+|.. .+..++..+ .+| .+.++++++.+.+.+ . +....+.++ + .+++.+ ...
T Consensus 171 ~VlV~GaG~vG~~-a~qla~~~G--a~V-i~~~~~~~~~~~~~~----l--Ga~~~~~~~~~~~~~~~i~~~~~~~~g~g 240 (352)
T 1e3j_A 171 TVLVIGAGPIGLV-SVLAAKAYG--AFV-VCTARSPRRLEVAKN----C--GADVTLVVDPAKEEESSIIERIRSAIGDL 240 (352)
T ss_dssp EEEEECCSHHHHH-HHHHHHHTT--CEE-EEEESCHHHHHHHHH----T--TCSEEEECCTTTSCHHHHHHHHHHHSSSC
T ss_pred EEEEECCCHHHHH-HHHHHHHcC--CEE-EEEcCCHHHHHHHHH----h--CCCEEEcCcccccHHHHHHHHhccccCCC
Confidence 6899999999974 555555544 575 456788888876654 3 222111111 1 233332 246
Q ss_pred ccEEEEecCCcccHHHHHHHHHcCCe-EEEe---cCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHH
Q 018445 74 ILGVAVVLAGQAQVDTSLKLLKAGKH-VIQE---KPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECK 149 (355)
Q Consensus 74 ~D~V~I~tp~~~H~~~~~~al~~Gkh-Vl~E---KP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k 149 (355)
+|+|+.++......+.+..+++.|-. |++- .+...+. ..+..+ ++.+. +. +++...+..+.
T Consensus 241 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~------~~~~~~-------~~~i~-g~-~~~~~~~~~~~ 305 (352)
T 1e3j_A 241 PNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPL------VNACAR-------EIDIK-SV-FRYCNDYPIAL 305 (352)
T ss_dssp CSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCH------HHHHTT-------TCEEE-EC-CSCSSCHHHHH
T ss_pred CCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccccH------HHHHhc-------CcEEE-Ee-ccchHHHHHHH
Confidence 99999999876666666777766533 3332 2333332 122222 33332 22 23455667777
Q ss_pred HHHHHhCCe
Q 018445 150 KLIAEIGDM 158 (355)
Q Consensus 150 ~~i~~iG~i 158 (355)
+++.+ |++
T Consensus 306 ~l~~~-g~i 313 (352)
T 1e3j_A 306 EMVAS-GRC 313 (352)
T ss_dssp HHHHT-TSC
T ss_pred HHHHc-CCC
Confidence 77776 553
No 453
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=88.11 E-value=4.6 Score=35.90 Aligned_cols=59 Identities=10% Similarity=-0.043 Sum_probs=51.7
Q ss_pred chhhhhcCCCccEEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccC
Q 018445 64 GLEQIIKEDSILGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSIC 124 (355)
Q Consensus 64 ~~~ell~~~~~D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~ 124 (355)
+.+.+.+ - +|+.-|++.+-.++++.+++.+.||+|++-++++.|++|....++.....|
T Consensus 182 ~~~~l~~-~-vd~lkIgAr~~~n~~LL~~va~~~kPVilk~G~~~tl~ei~~Ave~i~~~G 240 (350)
T 1vr6_A 182 DLPKVAE-Y-ADIIQIGARNAQNFRLLSKAGSYNKPVLLKRGFMNTIEEFLLSAEYIANSG 240 (350)
T ss_dssp GHHHHHH-H-CSEEEECGGGTTCHHHHHHHHTTCSCEEEECCTTCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHH-h-CCEEEECcccccCHHHHHHHHccCCcEEEcCCCCCCHHHHHHHHHHHHHCC
Confidence 4444444 3 899999999999999999999999999999999999999999999888863
No 454
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=87.81 E-value=0.34 Score=43.09 Aligned_cols=76 Identities=12% Similarity=0.069 Sum_probs=42.0
Q ss_pred CceEEEEe-cccccchhccchhhhcC-----CeEEEEEEEeCCH--HHHHHHHHHHhhh-cCCccccccCcchhhhhcCC
Q 018445 2 APRIAILG-AGIFVKTQYIPRLAEIS-----DLVSLKFIWSRSE--ESAKSAAEVARKH-FADVECVWGDNGLEQIIKED 72 (355)
Q Consensus 2 ~~rigiiG-~G~~~~~~~~~~l~~~~-----~~~~vvai~d~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~ell~~~ 72 (355)
++||+|+| +|.+|.. .+..|...+ ..+. +.++|+++ ++++..+...... .|-......+++..+.+++
T Consensus 3 ~~kV~V~GaaG~VG~~-la~~L~~~~~~~e~~~~~-l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~d- 79 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYS-LLYSIGNGSVFGKDQPII-LVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKD- 79 (333)
T ss_dssp CEEEEESSTTSHHHHT-THHHHHTTTTTCTTCCEE-EEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTT-
T ss_pred CeEEEEECCCCHHHHH-HHHHHHhCCCccccCCCE-EEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhCC-
Confidence 68999999 8999974 555554321 1133 57889874 3444433322121 1221111112444555655
Q ss_pred CccEEEEec
Q 018445 73 SILGVAVVL 81 (355)
Q Consensus 73 ~~D~V~I~t 81 (355)
.|+|+++.
T Consensus 80 -aDvVvitA 87 (333)
T 5mdh_A 80 -LDVAILVG 87 (333)
T ss_dssp -CSEEEECC
T ss_pred -CCEEEEeC
Confidence 89999874
No 455
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=87.81 E-value=2.7 Score=36.86 Aligned_cols=130 Identities=8% Similarity=0.030 Sum_probs=65.9
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh-----cCCccccccCcchhhhhc--CCCcc
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH-----FADVECVWGDNGLEQIIK--EDSIL 75 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ell~--~~~~D 75 (355)
-||..||||.-+ ....+.+..+..+++ .+|.+++..+.+.+.+... .+.+... ..|..+.+. +...|
T Consensus 110 ~~VLdIG~G~G~---~~~~l~~~~~~~~v~-~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~--~~D~~~~l~~~~~~fD 183 (314)
T 2b2c_A 110 KRVLIIGGGDGG---ILREVLKHESVEKVT-MCEIDEMVIDVAKKFLPGMSCGFSHPKLDLF--CGDGFEFLKNHKNEFD 183 (314)
T ss_dssp CEEEEESCTTSH---HHHHHTTCTTCCEEE-EECSCHHHHHHHHHHCTTTSGGGGCTTEEEE--CSCHHHHHHHCTTCEE
T ss_pred CEEEEEcCCcCH---HHHHHHHcCCCCEEE-EEECCHHHHHHHHHHHHHhccccCCCCEEEE--EChHHHHHHhcCCCce
Confidence 489999999643 233444443324665 4599999888777643221 1233222 256666553 35699
Q ss_pred EEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEe-cccCchHHHHHHHHHHH
Q 018445 76 GVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAE-NYRFEPAFVECKKLIAE 154 (355)
Q Consensus 76 ~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~-~~r~~p~~~~~k~~i~~ 154 (355)
+|++-.+.... ..++.+ +.+-.+++.+..+. .|+.+.-.. .+...+.+..+.+.+++
T Consensus 184 ~Ii~d~~~~~~---------~~~~l~-------t~~~l~~~~~~Lkp------gG~lv~~~~~~~~~~~~~~~~~~~l~~ 241 (314)
T 2b2c_A 184 VIITDSSDPVG---------PAESLF-------GQSYYELLRDALKE------DGILSSQGESVWLHLPLIAHLVAFNRK 241 (314)
T ss_dssp EEEECCC-----------------------------HHHHHHHHEEE------EEEEEEECCCTTTCHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCC---------cchhhh-------HHHHHHHHHhhcCC------CeEEEEECCCcccCHHHHHHHHHHHHH
Confidence 99985542210 001111 12233444555555 355444321 23334566777777777
Q ss_pred -hCCeeE
Q 018445 155 -IGDMMS 160 (355)
Q Consensus 155 -iG~i~~ 160 (355)
+..+..
T Consensus 242 vF~~v~~ 248 (314)
T 2b2c_A 242 IFPAVTY 248 (314)
T ss_dssp HCSEEEE
T ss_pred HCCcceE
Confidence 554443
No 456
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=87.79 E-value=2.6 Score=34.82 Aligned_cols=74 Identities=15% Similarity=0.052 Sum_probs=44.5
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcC---CccccccCcchhhhhc---CCCccEE
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFA---DVECVWGDNGLEQIIK---EDSILGV 77 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ell~---~~~~D~V 77 (355)
||.=||||. |.. -+......+.+.+|+++ |.+++..+.+.+.+++... .+... ..|..+++. +...|+|
T Consensus 59 ~vLdiG~G~-G~~-~~~la~~~~~~~~v~~v-D~~~~~~~~a~~~~~~~g~~~~~i~~~--~gda~~~l~~~~~~~fD~V 133 (221)
T 3dr5_A 59 GAIAITPAA-GLV-GLYILNGLADNTTLTCI-DPESEHQRQAKALFREAGYSPSRVRFL--LSRPLDVMSRLANDSYQLV 133 (221)
T ss_dssp EEEEESTTH-HHH-HHHHHHHSCTTSEEEEE-CSCHHHHHHHHHHHHHTTCCGGGEEEE--CSCHHHHGGGSCTTCEEEE
T ss_pred CEEEEcCCc-hHH-HHHHHHhCCCCCEEEEE-ECCHHHHHHHHHHHHHcCCCcCcEEEE--EcCHHHHHHHhcCCCcCeE
Confidence 788999995 422 12222334433677765 9999998887776544321 23222 256666654 3579999
Q ss_pred EEecC
Q 018445 78 AVVLA 82 (355)
Q Consensus 78 ~I~tp 82 (355)
++-.+
T Consensus 134 ~~d~~ 138 (221)
T 3dr5_A 134 FGQVS 138 (221)
T ss_dssp EECCC
T ss_pred EEcCc
Confidence 88643
No 457
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=87.61 E-value=1.1 Score=41.69 Aligned_cols=131 Identities=18% Similarity=0.206 Sum_probs=76.0
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcC---CCccEEEEe
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKE---DSILGVAVV 80 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~---~~~D~V~I~ 80 (355)
||.|+|.|.+|.. ..+.|.+. .++ -+.+.++++++.+++.. |+.....+..+-.++|.+ .+.|+++-.
T Consensus 237 ~v~I~GgG~ig~~-lA~~L~~~---~~v-~iIE~d~~r~~~la~~l----~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~ 307 (461)
T 4g65_A 237 RIMIVGGGNIGAS-LAKRLEQT---YSV-KLIERNLQRAEKLSEEL----ENTIVFCGDAADQELLTEENIDQVDVFIAL 307 (461)
T ss_dssp EEEEECCSHHHHH-HHHHHTTT---SEE-EEEESCHHHHHHHHHHC----TTSEEEESCTTCHHHHHHTTGGGCSEEEEC
T ss_pred EEEEEcchHHHHH-HHHHhhhc---Cce-EEEecCHHHHHHHHHHC----CCceEEeccccchhhHhhcCchhhcEEEEc
Confidence 7999999999975 56666432 444 56699999999998732 333333333333455554 458999888
Q ss_pred cCCccc-HHHHHHHHHcC-CeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHH--hC
Q 018445 81 LAGQAQ-VDTSLKLLKAG-KHVIQEKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAE--IG 156 (355)
Q Consensus 81 tp~~~H-~~~~~~al~~G-khVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~--iG 156 (355)
|.++.- .-.+..|-+.| +.+.+- .-+. +...+.++. |+...+ +|....+..+++. -|
T Consensus 308 T~~De~Ni~~~llAk~~gv~kvIa~---vn~~----~~~~l~~~~------gid~vi------sp~~~~a~~I~~~i~~~ 368 (461)
T 4g65_A 308 TNEDETNIMSAMLAKRMGAKKVMVL---IQRG----AYVDLVQGG------VIDVAI------SPQQATISALLTHVRRA 368 (461)
T ss_dssp CSCHHHHHHHHHHHHHTTCSEEEEE---CSCH----HHHHHHCSS------SSCEEE------CHHHHHHHHHHHHHHHT
T ss_pred ccCcHHHHHHHHHHHHcCCcccccc---cccc----chhhhhhcc------ccceee------CHHHHHHHHHHHHhhcc
Confidence 888643 33334444556 333331 1222 233445553 666665 6655555555443 35
Q ss_pred CeeEEE
Q 018445 157 DMMSVQ 162 (355)
Q Consensus 157 ~i~~v~ 162 (355)
++..+.
T Consensus 369 ~v~~v~ 374 (461)
T 4g65_A 369 DIVNVS 374 (461)
T ss_dssp TCCCEE
T ss_pred ccceEE
Confidence 655444
No 458
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=87.60 E-value=3.5 Score=36.49 Aligned_cols=74 Identities=14% Similarity=0.084 Sum_probs=44.4
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh-----cCCccccccCcchhhhhc---CCCc
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH-----FADVECVWGDNGLEQIIK---EDSI 74 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ell~---~~~~ 74 (355)
-||..||||.-+ ....+.+..+..+|++ +|.+++..+.+.+.+... .+.+... ..|..+.+. +...
T Consensus 122 ~~VLdIG~G~G~---~a~~la~~~~~~~V~~-VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~--~~D~~~~l~~~~~~~f 195 (334)
T 1xj5_A 122 KKVLVIGGGDGG---VLREVARHASIEQIDM-CEIDKMVVDVSKQFFPDVAIGYEDPRVNLV--IGDGVAFLKNAAEGSY 195 (334)
T ss_dssp CEEEEETCSSSH---HHHHHTTCTTCCEEEE-EESCHHHHHHHHHHCHHHHGGGGSTTEEEE--ESCHHHHHHTSCTTCE
T ss_pred CEEEEECCCccH---HHHHHHHcCCCCEEEE-EECCHHHHHHHHHHHHhhccccCCCcEEEE--ECCHHHHHHhccCCCc
Confidence 489999999633 2344444433256655 499999888776643221 1233322 267666654 3568
Q ss_pred cEEEEecC
Q 018445 75 LGVAVVLA 82 (355)
Q Consensus 75 D~V~I~tp 82 (355)
|+|++-.+
T Consensus 196 DlIi~d~~ 203 (334)
T 1xj5_A 196 DAVIVDSS 203 (334)
T ss_dssp EEEEECCC
T ss_pred cEEEECCC
Confidence 99998544
No 459
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=87.49 E-value=0.93 Score=40.61 Aligned_cols=90 Identities=17% Similarity=0.161 Sum_probs=52.9
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcc-h----hhhhcCCCccEEE
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNG-L----EQIIKEDSILGVA 78 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~ell~~~~~D~V~ 78 (355)
+|.|+|+|.+|.. .+..++...+ .+|+++ ++++++.+.+.+ . +....+.+++ + .++-....+|+|+
T Consensus 189 ~VlV~GaG~vG~~-avqlak~~~G-a~Vi~~-~~~~~~~~~~~~----l--Ga~~vi~~~~~~~~~v~~~~~g~g~Dvvi 259 (359)
T 1h2b_A 189 YVAIVGVGGLGHI-AVQLLKVMTP-ATVIAL-DVKEEKLKLAER----L--GADHVVDARRDPVKQVMELTRGRGVNVAM 259 (359)
T ss_dssp EEEEECCSHHHHH-HHHHHHHHCC-CEEEEE-ESSHHHHHHHHH----T--TCSEEEETTSCHHHHHHHHTTTCCEEEEE
T ss_pred EEEEECCCHHHHH-HHHHHHHcCC-CeEEEE-eCCHHHHHHHHH----h--CCCEEEeccchHHHHHHHHhCCCCCcEEE
Confidence 6899999999974 5665555523 676654 678888776643 3 3222211121 2 2222223699999
Q ss_pred EecCCcc--cHHHHHHHHHcCCeEEEe
Q 018445 79 VVLAGQA--QVDTSLKLLKAGKHVIQE 103 (355)
Q Consensus 79 I~tp~~~--H~~~~~~al~~GkhVl~E 103 (355)
-++.... ..+.+..+ ..|+-|++-
T Consensus 260 d~~G~~~~~~~~~~~~~-~~G~~v~~g 285 (359)
T 1h2b_A 260 DFVGSQATVDYTPYLLG-RMGRLIIVG 285 (359)
T ss_dssp ESSCCHHHHHHGGGGEE-EEEEEEECC
T ss_pred ECCCCchHHHHHHHhhc-CCCEEEEEe
Confidence 9998764 44444444 556556654
No 460
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=87.47 E-value=2.6 Score=35.88 Aligned_cols=59 Identities=10% Similarity=-0.000 Sum_probs=51.8
Q ss_pred chhhhhcCCCccEEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccC
Q 018445 64 GLEQIIKEDSILGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSIC 124 (355)
Q Consensus 64 ~~~ell~~~~~D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~ 124 (355)
+.+.+.+ - +|++-|++.+-.+.++.+++.+.||+|.+-++++.+++|....++..+..|
T Consensus 99 ~~~~l~~-~-vd~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~Av~~i~~~G 157 (262)
T 1zco_A 99 HVELVAK-Y-SDILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAEYIMAQG 157 (262)
T ss_dssp GHHHHHH-H-CSEEEECGGGTTCHHHHHHHTTSSSCEEEECCTTCCHHHHHHHHHHHHTTT
T ss_pred hHHHHHh-h-CCEEEECcccccCHHHHHHHHhcCCcEEEecCCCCCHHHHHHHHHHHHHCC
Confidence 4444444 4 899999999999999999999999999999999999999999999998863
No 461
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=87.36 E-value=9.7 Score=32.56 Aligned_cols=73 Identities=10% Similarity=0.024 Sum_probs=44.0
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh------------cCCccccccCcchhhhhc
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH------------FADVECVWGDNGLEQIIK 70 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~ell~ 70 (355)
-||..||||.-+ ....+.+.+. .++++ +|.+++..+.+.+.+ +. .+.+... ..|..+.+.
T Consensus 77 ~~VLdiG~G~G~---~~~~l~~~~~-~~v~~-vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~--~~D~~~~l~ 148 (281)
T 1mjf_A 77 KRVLVIGGGDGG---TVREVLQHDV-DEVIM-VEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLT--IGDGFEFIK 148 (281)
T ss_dssp CEEEEEECTTSH---HHHHHTTSCC-SEEEE-EESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEE--ESCHHHHHH
T ss_pred CeEEEEcCCcCH---HHHHHHhCCC-CEEEE-EECCHHHHHHHHHHH-hhccccccccccCCCCcEEEE--ECchHHHhc
Confidence 489999999643 2334444443 46654 599999888877643 11 1233222 256555543
Q ss_pred -CCCccEEEEecCC
Q 018445 71 -EDSILGVAVVLAG 83 (355)
Q Consensus 71 -~~~~D~V~I~tp~ 83 (355)
+...|+|++-.|.
T Consensus 149 ~~~~fD~Ii~d~~~ 162 (281)
T 1mjf_A 149 NNRGFDVIIADSTD 162 (281)
T ss_dssp HCCCEEEEEEECCC
T ss_pred ccCCeeEEEECCCC
Confidence 4569999987664
No 462
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=87.33 E-value=6.2 Score=34.16 Aligned_cols=74 Identities=8% Similarity=0.055 Sum_probs=42.2
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh------cCCccccccCcchhhhhc--CCCc
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH------FADVECVWGDNGLEQIIK--EDSI 74 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ell~--~~~~ 74 (355)
-||.+||||.-+. +..+.+.++..+|+ .+|.+++-.+.+.+.+... .+.+... ..|..+.+. +...
T Consensus 85 ~~VLdiG~G~G~~---~~~l~~~~~~~~V~-~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~--~~D~~~~l~~~~~~f 158 (294)
T 3adn_A 85 KHVLIIGGGDGAM---LREVTRHKNVESIT-MVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLV--IDDGVNFVNQTSQTF 158 (294)
T ss_dssp CEEEEESCTTCHH---HHHHHTCTTCCEEE-EECSCTTHHHHHHHHCHHHHSSCTTCTTCCEE--CSCSCC---CCCCCE
T ss_pred CEEEEEeCChhHH---HHHHHhCCCCCEEE-EEECCHHHHHHHHHhhhhcccccccCCceEEE--EChHHHHHhhcCCCc
Confidence 4899999996442 34445444324555 4599998888776643222 1233322 255555554 3569
Q ss_pred cEEEEecC
Q 018445 75 LGVAVVLA 82 (355)
Q Consensus 75 D~V~I~tp 82 (355)
|+|++-.+
T Consensus 159 DvIi~D~~ 166 (294)
T 3adn_A 159 DVIISDCT 166 (294)
T ss_dssp EEEEECC-
T ss_pred cEEEECCC
Confidence 99988544
No 463
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=87.29 E-value=2.1 Score=35.42 Aligned_cols=74 Identities=16% Similarity=0.098 Sum_probs=43.9
Q ss_pred ceEEEEecccccchhccchhh-hcCCeEEEEEEEeCCHHHHHHHHHHHhhhcC--CccccccCcchhhhhc----CCCcc
Q 018445 3 PRIAILGAGIFVKTQYIPRLA-EISDLVSLKFIWSRSEESAKSAAEVARKHFA--DVECVWGDNGLEQIIK----EDSIL 75 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~-~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ell~----~~~~D 75 (355)
.+|.-|||| .|.. ...+. ..++ .+++++ |.+++..+.+.+.+..... .+... ..|..+.+. +...|
T Consensus 56 ~~vLdiG~G-~G~~--~~~la~~~~~-~~v~~v-D~~~~~~~~a~~~~~~~~~~~~v~~~--~~d~~~~~~~~~~~~~fD 128 (233)
T 2gpy_A 56 ARILEIGTA-IGYS--AIRMAQALPE-ATIVSI-ERDERRYEEAHKHVKALGLESRIELL--FGDALQLGEKLELYPLFD 128 (233)
T ss_dssp SEEEEECCT-TSHH--HHHHHHHCTT-CEEEEE-CCCHHHHHHHHHHHHHTTCTTTEEEE--CSCGGGSHHHHTTSCCEE
T ss_pred CEEEEecCC-CcHH--HHHHHHHCCC-CEEEEE-ECCHHHHHHHHHHHHHcCCCCcEEEE--ECCHHHHHHhcccCCCcc
Confidence 478999999 4542 33333 3443 577665 9999998887765543321 22222 245544322 35699
Q ss_pred EEEEecCC
Q 018445 76 GVAVVLAG 83 (355)
Q Consensus 76 ~V~I~tp~ 83 (355)
+|++..+.
T Consensus 129 ~I~~~~~~ 136 (233)
T 2gpy_A 129 VLFIDAAK 136 (233)
T ss_dssp EEEEEGGG
T ss_pred EEEECCCH
Confidence 99986653
No 464
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=87.04 E-value=1.5 Score=35.77 Aligned_cols=137 Identities=12% Similarity=0.074 Sum_probs=79.3
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLA 82 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp 82 (355)
.+|.=||||. |. +...+.... .+++++ |.+++..+.+.+... .++... ..|+.++......|+|+....
T Consensus 47 ~~vLDiGcG~-G~--~~~~l~~~~--~~v~~v-D~s~~~~~~a~~~~~---~~~~~~--~~d~~~~~~~~~fD~v~~~~~ 115 (220)
T 3hnr_A 47 GNVLEFGVGT-GN--LTNKLLLAG--RTVYGI-EPSREMRMIAKEKLP---KEFSIT--EGDFLSFEVPTSIDTIVSTYA 115 (220)
T ss_dssp SEEEEECCTT-SH--HHHHHHHTT--CEEEEE-CSCHHHHHHHHHHSC---TTCCEE--SCCSSSCCCCSCCSEEEEESC
T ss_pred CeEEEeCCCC-CH--HHHHHHhCC--CeEEEE-eCCHHHHHHHHHhCC---CceEEE--eCChhhcCCCCCeEEEEECcc
Confidence 4788899995 43 455555543 577766 999988887766321 133222 245555543367999887632
Q ss_pred Ccc--------cHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhccCCCCCCCCe-EEEEecccCchHHHHHHHHHH
Q 018445 83 GQA--------QVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSICPDPPGQPI-WAVAENYRFEPAFVECKKLIA 153 (355)
Q Consensus 83 ~~~--------H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~-~~v~~~~r~~p~~~~~k~~i~ 153 (355)
-.. -..-+..+|+.|=.+++.-|...+......+....... +-. +.......+.+....++++++
T Consensus 116 l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~ 189 (220)
T 3hnr_A 116 FHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQR------GFHQLANDLQTEYYTRIPVMQTIFE 189 (220)
T ss_dssp GGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHT------TCHHHHHHHHHSCCCBHHHHHHHHH
T ss_pred hhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhC------CCccchhhcchhhcCCHHHHHHHHH
Confidence 221 12233445555655666667777777777777766552 211 111222234456678888888
Q ss_pred HhC
Q 018445 154 EIG 156 (355)
Q Consensus 154 ~iG 156 (355)
+-|
T Consensus 190 ~aG 192 (220)
T 3hnr_A 190 NNG 192 (220)
T ss_dssp HTT
T ss_pred HCC
Confidence 733
No 465
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=86.95 E-value=4.5 Score=35.57 Aligned_cols=74 Identities=9% Similarity=0.073 Sum_probs=44.3
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh-----cCCccccccCcchhhhhc--CCCcc
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH-----FADVECVWGDNGLEQIIK--EDSIL 75 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ell~--~~~~D 75 (355)
.||..||||.-+ ....+.+..+..++++ +|.+++..+.+.+.+... .+.+... ..|..+.+. +...|
T Consensus 118 ~~VLdiG~G~G~---~~~~l~~~~~~~~v~~-vDis~~~l~~ar~~~~~~~~~~~~~~v~~~--~~D~~~~l~~~~~~fD 191 (321)
T 2pt6_A 118 KNVLVVGGGDGG---IIRELCKYKSVENIDI-CEIDETVIEVSKIYFKNISCGYEDKRVNVF--IEDASKFLENVTNTYD 191 (321)
T ss_dssp CEEEEEECTTCH---HHHHHTTCTTCCEEEE-EESCHHHHHHHHHHCTTTSGGGGSTTEEEE--ESCHHHHHHHCCSCEE
T ss_pred CEEEEEcCCccH---HHHHHHHcCCCCEEEE-EECCHHHHHHHHHHHHhhccccCCCcEEEE--EccHHHHHhhcCCCce
Confidence 489999999643 2334444433256655 599999888877643221 1223222 256666553 35699
Q ss_pred EEEEecC
Q 018445 76 GVAVVLA 82 (355)
Q Consensus 76 ~V~I~tp 82 (355)
+|++-.+
T Consensus 192 vIi~d~~ 198 (321)
T 2pt6_A 192 VIIVDSS 198 (321)
T ss_dssp EEEEECC
T ss_pred EEEECCc
Confidence 9998654
No 466
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=86.92 E-value=2.2 Score=34.92 Aligned_cols=75 Identities=12% Similarity=-0.086 Sum_probs=43.6
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcC--CccccccCcchhhhhcC-------CC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFA--DVECVWGDNGLEQIIKE-------DS 73 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ell~~-------~~ 73 (355)
.+|.=||||. |.. -+......++..+|+++ |.+++..+.+.+.+++... .+... ..+..+.+.. ..
T Consensus 66 ~~vLdiG~G~-G~~-~~~la~~~~~~~~v~~v-D~~~~~~~~a~~~~~~~~~~~~v~~~--~~d~~~~~~~~~~~~~~~~ 140 (225)
T 3tr6_A 66 KKVIDIGTFT-GYS-AIAMGLALPKDGTLITC-DVDEKSTALAKEYWEKAGLSDKIGLR--LSPAKDTLAELIHAGQAWQ 140 (225)
T ss_dssp SEEEEECCTT-SHH-HHHHHTTCCTTCEEEEE-ESCHHHHHHHHHHHHHTTCTTTEEEE--ESCHHHHHHHHHTTTCTTC
T ss_pred CEEEEeCCcc-hHH-HHHHHHhCCCCCEEEEE-eCCHHHHHHHHHHHHHCCCCCceEEE--eCCHHHHHHHhhhccCCCC
Confidence 4788899996 432 22222334423677665 9999988887765544321 12222 2456555432 56
Q ss_pred ccEEEEecC
Q 018445 74 ILGVAVVLA 82 (355)
Q Consensus 74 ~D~V~I~tp 82 (355)
+|+|++-.+
T Consensus 141 fD~v~~~~~ 149 (225)
T 3tr6_A 141 YDLIYIDAD 149 (225)
T ss_dssp EEEEEECSC
T ss_pred ccEEEECCC
Confidence 999986554
No 467
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=86.88 E-value=0.55 Score=43.57 Aligned_cols=141 Identities=16% Similarity=0.081 Sum_probs=72.3
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhh---hcCCCccEE
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQI---IKEDSILGV 77 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el---l~~~~~D~V 77 (355)
|.|||.|||.|..... ....+.+.+. +..+.++.-++..... . +.. .+ . +.|++.+ ..+.++|+|
T Consensus 20 ~~m~ilvlG~ggre~a-la~~l~~s~~-v~~v~~~pgn~g~~~~-~----~~~-~i--~--~~d~~~l~~~a~~~~id~v 87 (442)
T 3lp8_A 20 GSMNVLVIGSGGREHS-MLHHIRKSTL-LNKLFIAPGREGMSGL-A----DII-DI--D--INSTIEVIQVCKKEKIELV 87 (442)
T ss_dssp CCEEEEEEECSHHHHH-HHHHHTTCTT-EEEEEEEECCGGGTTT-S----EEC-CC--C--TTCHHHHHHHHHHTTCCEE
T ss_pred CCCEEEEECCChHHHH-HHHHHHhCCC-CCEEEEECCChHHhhc-c----cee-ec--C--cCCHHHHHHHHHHhCCCEE
Confidence 5789999999943321 3345555555 6665666555443311 1 111 11 1 2455555 446779999
Q ss_pred EEecCCcccH-HHHHHHHHcCCeEEEecCCCCCHHHHH-HHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHHh
Q 018445 78 AVVLAGQAQV-DTSLKLLKAGKHVIQEKPAAANISEIE-NALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAEI 155 (355)
Q Consensus 78 ~I~tp~~~H~-~~~~~al~~GkhVl~EKP~a~~~~e~~-~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~i 155 (355)
++. |...-. .++..+-+.|.+++.-.|-+.....-+ .+.++++++ |+..-- ++.......+.+.++++
T Consensus 88 v~g-~E~~l~~~~~~~l~~~Gi~~~Gp~~~a~~~~~dK~~~k~~l~~~------GIp~p~---~~~~~~~~ea~~~~~~~ 157 (442)
T 3lp8_A 88 VIG-PETPLMNGLSDALTEEGILVFGPSKAAARLESSKGFTKELCMRY------GIPTAK---YGYFVDTNSAYKFIDKH 157 (442)
T ss_dssp EEC-SHHHHHTTHHHHHHHTTCEEESCCHHHHHHHHCHHHHHHHHHHH------TCCBCC---EEEESSHHHHHHHHHHS
T ss_pred EEC-CcHHHHHHHHHHHHhcCCcEecCCHHHHHHhhCHHHHHHHHHHC------CCCCCC---EEEECCHHHHHHHHHHc
Confidence 874 222211 344555567888874332222221112 233555664 655311 11222345666677777
Q ss_pred CCeeEEEE
Q 018445 156 GDMMSVQV 163 (355)
Q Consensus 156 G~i~~v~~ 163 (355)
|-+.-+..
T Consensus 158 g~PvVvKp 165 (442)
T 3lp8_A 158 KLPLVVKA 165 (442)
T ss_dssp CSSEEEEE
T ss_pred CCcEEEeE
Confidence 87665653
No 468
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=86.87 E-value=1.7 Score=37.47 Aligned_cols=87 Identities=13% Similarity=0.087 Sum_probs=51.6
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhc-CC-ccccccCcchhhhhcCCCccEEEEec
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHF-AD-VECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
+|.=+|||. |.- -++++.. +. .+|+| +|.++...+.+.+.++... .+ +. .+ ..|..++......|.|++..
T Consensus 128 ~VlD~~aG~-G~~-~i~~a~~-g~-~~V~a-vD~np~a~~~~~~N~~~N~v~~~v~-~~-~~D~~~~~~~~~~D~Vi~~~ 200 (278)
T 3k6r_A 128 LVVDMFAGI-GHL-SLPIAVY-GK-AKVIA-IEKDPYTFKFLVENIHLNKVEDRMS-AY-NMDNRDFPGENIADRILMGY 200 (278)
T ss_dssp EEEETTCTT-TTT-THHHHHH-TC-CEEEE-ECCCHHHHHHHHHHHHHTTCTTTEE-EE-CSCTTTCCCCSCEEEEEECC
T ss_pred EEEEecCcC-cHH-HHHHHHh-cC-CeEEE-EECCHHHHHHHHHHHHHcCCCCcEE-EE-eCcHHHhccccCCCEEEECC
Confidence 455567774 432 3444333 33 46655 5999999888776554431 11 22 11 25777777777799998887
Q ss_pred CCccc--HHHHHHHHHcC
Q 018445 82 AGQAQ--VDTSLKLLKAG 97 (355)
Q Consensus 82 p~~~H--~~~~~~al~~G 97 (355)
|+..+ .+.+..+++.|
T Consensus 201 p~~~~~~l~~a~~~lk~g 218 (278)
T 3k6r_A 201 VVRTHEFIPKALSIAKDG 218 (278)
T ss_dssp CSSGGGGHHHHHHHEEEE
T ss_pred CCcHHHHHHHHHHHcCCC
Confidence 77654 34445555555
No 469
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=86.69 E-value=2.2 Score=35.13 Aligned_cols=75 Identities=7% Similarity=-0.087 Sum_probs=42.0
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhc--CCccccccCcchhhhhcC-------CC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHF--ADVECVWGDNGLEQIIKE-------DS 73 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ell~~-------~~ 73 (355)
-+|.-|||| .|.. -+......++..+++++ |.+++..+.+.+.++... ..+... ..+..+.+.. ..
T Consensus 71 ~~vLdiG~G-~G~~-~~~la~~~~~~~~v~~v-D~~~~~~~~a~~~~~~~g~~~~i~~~--~~d~~~~~~~~~~~~~~~~ 145 (229)
T 2avd_A 71 KKALDLGTF-TGYS-ALALALALPADGRVVTC-EVDAQPPELGRPLWRQAEAEHKIDLR--LKPALETLDELLAAGEAGT 145 (229)
T ss_dssp CEEEEECCT-TSHH-HHHHHTTSCTTCEEEEE-ESCSHHHHHHHHHHHHTTCTTTEEEE--ESCHHHHHHHHHHTTCTTC
T ss_pred CEEEEEcCC-ccHH-HHHHHHhCCCCCEEEEE-ECCHHHHHHHHHHHHHCCCCCeEEEE--EcCHHHHHHHHHhcCCCCC
Confidence 478899999 4532 22222333423577655 999998888776544331 122211 1444444321 56
Q ss_pred ccEEEEecC
Q 018445 74 ILGVAVVLA 82 (355)
Q Consensus 74 ~D~V~I~tp 82 (355)
+|+|++-.+
T Consensus 146 ~D~v~~d~~ 154 (229)
T 2avd_A 146 FDVAVVDAD 154 (229)
T ss_dssp EEEEEECSC
T ss_pred ccEEEECCC
Confidence 899988544
No 470
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=86.62 E-value=0.25 Score=40.91 Aligned_cols=93 Identities=11% Similarity=0.090 Sum_probs=56.5
Q ss_pred ceEEEEe-cccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCcccccc----CcchhhhhcCCCccEE
Q 018445 3 PRIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWG----DNGLEQIIKEDSILGV 77 (355)
Q Consensus 3 ~rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ell~~~~~D~V 77 (355)
+||.|+| +|.+|.. .+..|.+.+ .+|+++ ++++++.+.+.. ++....+ .++++++++. +|+|
T Consensus 5 ~~ilItGatG~iG~~-l~~~L~~~g--~~V~~~-~r~~~~~~~~~~-------~~~~~~~Dl~d~~~~~~~~~~--~d~v 71 (227)
T 3dhn_A 5 KKIVLIGASGFVGSA-LLNEALNRG--FEVTAV-VRHPEKIKIENE-------HLKVKKADVSSLDEVCEVCKG--ADAV 71 (227)
T ss_dssp CEEEEETCCHHHHHH-HHHHHHTTT--CEEEEE-CSCGGGCCCCCT-------TEEEECCCTTCHHHHHHHHTT--CSEE
T ss_pred CEEEEEcCCchHHHH-HHHHHHHCC--CEEEEE-EcCcccchhccC-------ceEEEEecCCCHHHHHHHhcC--CCEE
Confidence 5999999 5889974 777777654 577554 777766432211 1111110 0345566664 8999
Q ss_pred EEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhcc
Q 018445 78 AVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSI 123 (355)
Q Consensus 78 ~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~ 123 (355)
+.+....... +..+..+..-...++++++++
T Consensus 72 i~~a~~~~~~---------------~~~~~~n~~~~~~l~~~~~~~ 102 (227)
T 3dhn_A 72 ISAFNPGWNN---------------PDIYDETIKVYLTIIDGVKKA 102 (227)
T ss_dssp EECCCC---------------------CCSHHHHHHHHHHHHHHHT
T ss_pred EEeCcCCCCC---------------hhHHHHHHHHHHHHHHHHHHh
Confidence 9887553111 113455777788899999885
No 471
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=86.50 E-value=0.5 Score=42.17 Aligned_cols=128 Identities=11% Similarity=0.094 Sum_probs=75.3
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEecCC
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVLAG 83 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~tp~ 83 (355)
+|.|+|+|.+|.. .+..++.. + .+|+++ ++++++.+.+.+ . +....+ .+.+++.+ .+|+|+-++..
T Consensus 179 ~VlV~GaG~vG~~-a~qla~~~-G-a~Vi~~-~~~~~~~~~~~~----l--Ga~~v~--~~~~~~~~--~~D~vid~~g~ 244 (348)
T 3two_A 179 KVGVAGFGGLGSM-AVKYAVAM-G-AEVSVF-ARNEHKKQDALS----M--GVKHFY--TDPKQCKE--ELDFIISTIPT 244 (348)
T ss_dssp EEEEESCSHHHHH-HHHHHHHT-T-CEEEEE-CSSSTTHHHHHH----T--TCSEEE--SSGGGCCS--CEEEEEECCCS
T ss_pred EEEEECCcHHHHH-HHHHHHHC-C-CeEEEE-eCCHHHHHHHHh----c--CCCeec--CCHHHHhc--CCCEEEECCCc
Confidence 7899999999974 55555554 3 677665 677777776543 3 333232 33344333 79999999998
Q ss_pred cccHHHHHHHHHcC-CeEEEec----CCC-CCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHHhCC
Q 018445 84 QAQVDTSLKLLKAG-KHVIQEK----PAA-ANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAEIGD 157 (355)
Q Consensus 84 ~~H~~~~~~al~~G-khVl~EK----P~a-~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~iG~ 157 (355)
....+.+..+++.| +-|++-. |.. .+. ..+... +++.+ .+........+..+.+++.+ |+
T Consensus 245 ~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~------~~~~~~------~~~~i-~g~~~~~~~~~~~~~~l~~~-g~ 310 (348)
T 3two_A 245 HYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSV------FDFIHL------GNRKV-YGSLIGGIKETQEMVDFSIK-HN 310 (348)
T ss_dssp CCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEH------HHHHHT------CSCEE-EECCSCCHHHHHHHHHHHHH-TT
T ss_pred HHHHHHHHHHHhcCCEEEEECCCCCCCcccCCH------HHHHhh------CCeEE-EEEecCCHHHHHHHHHHHHh-CC
Confidence 87788887777765 4455532 222 222 222211 14443 34433333556677777776 55
Q ss_pred ee
Q 018445 158 MM 159 (355)
Q Consensus 158 i~ 159 (355)
+.
T Consensus 311 l~ 312 (348)
T 3two_A 311 IY 312 (348)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 472
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=86.48 E-value=1.3 Score=41.24 Aligned_cols=85 Identities=13% Similarity=-0.001 Sum_probs=52.9
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCC-HHHHHHHHHHHhhhcCCccccccCcch-hhhhcCCCccEEEEe
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRS-EESAKSAAEVARKHFADVECVWGDNGL-EQIIKEDSILGVAVV 80 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ell~~~~~D~V~I~ 80 (355)
.||.|||.|..|.. -+..|.+.+ .+|+-+ |++ .+..+.+.+ +. ++.... ..+ ++.++ +.|+|+++
T Consensus 13 ~~vlVvGgG~va~~-k~~~L~~~g--a~V~vi-~~~~~~~~~~l~~---~~--~i~~~~--~~~~~~~l~--~~~lVi~a 79 (457)
T 1pjq_A 13 RDCLIVGGGDVAER-KARLLLEAG--ARLTVN-ALTFIPQFTVWAN---EG--MLTLVE--GPFDETLLD--SCWLAIAA 79 (457)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--BEEEEE-ESSCCHHHHHHHT---TT--SCEEEE--SSCCGGGGT--TCSEEEEC
T ss_pred CEEEEECCCHHHHH-HHHHHHhCc--CEEEEE-cCCCCHHHHHHHh---cC--CEEEEE--CCCCccccC--CccEEEEc
Confidence 58999999999986 677777765 465544 443 233333321 11 222111 222 22333 48999998
Q ss_pred cCCc-ccHHHHHHHHHcCCeE
Q 018445 81 LAGQ-AQVDTSLKLLKAGKHV 100 (355)
Q Consensus 81 tp~~-~H~~~~~~al~~GkhV 100 (355)
|... ....+...|-++|+.|
T Consensus 80 t~~~~~n~~i~~~a~~~~i~v 100 (457)
T 1pjq_A 80 TDDDTVNQRVSDAAESRRIFC 100 (457)
T ss_dssp CSCHHHHHHHHHHHHHTTCEE
T ss_pred CCCHHHHHHHHHHHHHcCCEE
Confidence 8887 5788888999999876
No 473
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=86.39 E-value=0.81 Score=41.01 Aligned_cols=83 Identities=13% Similarity=0.109 Sum_probs=53.0
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcC---CCccEEEE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKE---DSILGVAV 79 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~---~~~D~V~I 79 (355)
.++.|+|.|+.+.. ..+....++ ++|+ +||..++-+.. ..+|+..... ...+++.++. +.-++|+|
T Consensus 200 ~~L~I~GaGhva~a-La~la~~lg--f~V~-v~D~R~~~~~~------~~fp~a~~v~-~~~p~~~~~~~~~~~~t~vvv 268 (362)
T 3on5_A 200 ERLIIFGAGPDVPP-LVTFASNVG--FYTV-VTDWRPNQCEK------HFFPDADEII-VDFPADFLRKFLIRPDDFVLI 268 (362)
T ss_dssp EEEEEECCSTTHHH-HHHHHHHHT--EEEE-EEESCGGGGCG------GGCTTCSEEE-ESCHHHHHHHSCCCTTCEEEE
T ss_pred CEEEEECCCHHHHH-HHHHHHHCC--CeEE-EECCCcccccc------ccCCCceEEe-cCCHHHHHhhcCCCCCeEEEE
Confidence 58999999999974 555555664 8884 67887776432 3456654222 2456776654 34578899
Q ss_pred ecCCcccHHHH-HHHHHc
Q 018445 80 VLAGQAQVDTS-LKLLKA 96 (355)
Q Consensus 80 ~tp~~~H~~~~-~~al~~ 96 (355)
.|.++.+-..+ .++|+.
T Consensus 269 ~TH~h~~D~~~L~~aL~~ 286 (362)
T 3on5_A 269 MTHHFQKDQEILHFLLEK 286 (362)
T ss_dssp CCSCHHHHHHHHHHHSSS
T ss_pred EeCCchhhHHHHHHHhcC
Confidence 99876554444 444443
No 474
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=86.23 E-value=3.1 Score=29.78 Aligned_cols=108 Identities=19% Similarity=0.249 Sum_probs=57.8
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccc-------cccCcchhhhhc-CC
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVEC-------VWGDNGLEQIIK-ED 72 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ell~-~~ 72 (355)
|.+||.||.-...-.. .+..+....+ ++++..+....+..+.+.+ ..|++-. .-+.+-.+.+-+ .+
T Consensus 1 m~~~ilivdd~~~~~~-~l~~~l~~~g-~~vv~~~~~~~~a~~~~~~----~~~dlil~D~~l~~~~g~~~~~~l~~~~~ 74 (120)
T 1tmy_A 1 MGKRVLIVDDAAFMRM-MLKDIITKAG-YEVAGEATNGREAVEKYKE----LKPDIVTMDITMPEMNGIDAIKEIMKIDP 74 (120)
T ss_dssp -CCEEEEECSCHHHHH-HHHHHHHHTT-CEEEEEESSHHHHHHHHHH----HCCSEEEEECSCGGGCHHHHHHHHHHHCT
T ss_pred CCceEEEEcCcHHHHH-HHHHHHhhcC-cEEEEEECCHHHHHHHHHh----cCCCEEEEeCCCCCCcHHHHHHHHHhhCC
Confidence 7889999987665443 3333333333 7776666655555544433 2223210 000011223322 24
Q ss_pred CccEEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHH
Q 018445 73 SILGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALS 118 (355)
Q Consensus 73 ~~D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~ 118 (355)
.+-+++++... ..+....++++|..=++.||+ +.++..+.++
T Consensus 75 ~~~ii~~s~~~--~~~~~~~~~~~g~~~~l~KP~--~~~~l~~~i~ 116 (120)
T 1tmy_A 75 NAKIIVCSAMG--QQAMVIEAIKAGAKDFIVKPF--QPSRVVEALN 116 (120)
T ss_dssp TCCEEEEECTT--CHHHHHHHHHTTCCEEEESSC--CHHHHHHHHH
T ss_pred CCeEEEEeCCC--CHHHHHHHHHhCcceeEeCCC--CHHHHHHHHH
Confidence 45555555443 356778899999999999996 4455554443
No 475
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=86.17 E-value=3.4 Score=34.65 Aligned_cols=75 Identities=15% Similarity=-0.057 Sum_probs=44.9
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhc-C-CccccccCcchhhhhc----CCCccE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHF-A-DVECVWGDNGLEQIIK----EDSILG 76 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~ell~----~~~~D~ 76 (355)
.+|.=||||. |.. -+......++..+|+++ |.+++..+.+.+.+.+.. . .+... ..|..+.+. ....|+
T Consensus 65 ~~VLdiG~G~-G~~-~~~la~~~~~~~~v~~v-D~s~~~~~~a~~~~~~~g~~~~v~~~--~~d~~~~l~~~~~~~~fD~ 139 (248)
T 3tfw_A 65 KRILEIGTLG-GYS-TIWMARELPADGQLLTL-EADAHHAQVARENLQLAGVDQRVTLR--EGPALQSLESLGECPAFDL 139 (248)
T ss_dssp SEEEEECCTT-SHH-HHHHHTTSCTTCEEEEE-ECCHHHHHHHHHHHHHTTCTTTEEEE--ESCHHHHHHTCCSCCCCSE
T ss_pred CEEEEecCCc-hHH-HHHHHHhCCCCCEEEEE-ECCHHHHHHHHHHHHHcCCCCcEEEE--EcCHHHHHHhcCCCCCeEE
Confidence 4789999996 432 22222344423677665 999999888877554432 1 22222 256666554 236999
Q ss_pred EEEecC
Q 018445 77 VAVVLA 82 (355)
Q Consensus 77 V~I~tp 82 (355)
|++..+
T Consensus 140 V~~d~~ 145 (248)
T 3tfw_A 140 IFIDAD 145 (248)
T ss_dssp EEECSC
T ss_pred EEECCc
Confidence 998543
No 476
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=86.11 E-value=2.9 Score=34.21 Aligned_cols=74 Identities=15% Similarity=-0.024 Sum_probs=43.2
Q ss_pred ceEEEEecccccchhccchhh-hcCCeEEEEEEEeCCHHHHHHHHHHHhhhc-C-CccccccCcchhhhhcC------CC
Q 018445 3 PRIAILGAGIFVKTQYIPRLA-EISDLVSLKFIWSRSEESAKSAAEVARKHF-A-DVECVWGDNGLEQIIKE------DS 73 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~-~~~~~~~vvai~d~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~ell~~------~~ 73 (355)
.+|.=||||. |. +...+. ..+.+.+++++ |.+++..+.+.+.+.+.. + .+... ..|..+.+.. ..
T Consensus 60 ~~vLdiG~G~-G~--~~~~la~~~~~~~~v~~v-D~~~~~~~~a~~~~~~~~~~~~v~~~--~~d~~~~~~~~~~~~~~~ 133 (223)
T 3duw_A 60 RNILEIGTLG-GY--STIWLARGLSSGGRVVTL-EASEKHADIARSNIERANLNDRVEVR--TGLALDSLQQIENEKYEP 133 (223)
T ss_dssp SEEEEECCTT-SH--HHHHHHTTCCSSCEEEEE-ESCHHHHHHHHHHHHHTTCTTTEEEE--ESCHHHHHHHHHHTTCCC
T ss_pred CEEEEecCCc-cH--HHHHHHHhCCCCCEEEEE-ECCHHHHHHHHHHHHHcCCCCcEEEE--EcCHHHHHHHHHhcCCCC
Confidence 4788899995 43 233333 44423577665 999998888776554331 1 12222 2455554432 45
Q ss_pred ccEEEEecC
Q 018445 74 ILGVAVVLA 82 (355)
Q Consensus 74 ~D~V~I~tp 82 (355)
+|+|++..+
T Consensus 134 fD~v~~d~~ 142 (223)
T 3duw_A 134 FDFIFIDAD 142 (223)
T ss_dssp CSEEEECSC
T ss_pred cCEEEEcCC
Confidence 999987655
No 477
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=86.09 E-value=3.6 Score=33.98 Aligned_cols=92 Identities=12% Similarity=0.119 Sum_probs=48.1
Q ss_pred CCceEEEEecccccchhccchhhh---cCCeEEEEEEEeC---CHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCc
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAE---ISDLVSLKFIWSR---SEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSI 74 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~---~~~~~~vvai~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~ 74 (355)
|-+|||||=||++|....+..+.. -..++++.-+-+- +++.++..... .-++.++-++
T Consensus 2 mvvKiGiiKlGNigts~~idl~LDErAdRedI~vrv~gsGaKm~pe~~~~~~~~----------------~~~~~~~~~p 65 (283)
T 1qv9_A 2 TVAKAIFIKCGNLGTSMMMDMLLDERADREDVEFRVVGTSVKMDPECVEAAVEM----------------ALDIAEDFEP 65 (283)
T ss_dssp CCEEEEEEECSCCHHHHHTTGGGSTTSCCSSEEEEEEECTTCCSHHHHHHHHHH----------------HHHHHHHHCC
T ss_pred eeEEEEEEEecccchHHHHHHHHHhhhccCCceEEEeccCCCCCHHHHHHHHHH----------------hhhhhhhcCC
Confidence 567999999999998766655542 1112444333222 33443332221 0011122347
Q ss_pred cEEEEecCCcccH--HHHHHHHH-cCCe--EEEecCCCC
Q 018445 75 LGVAVVLAGQAQV--DTSLKLLK-AGKH--VIQEKPAAA 108 (355)
Q Consensus 75 D~V~I~tp~~~H~--~~~~~al~-~Gkh--Vl~EKP~a~ 108 (355)
|.|++.+||..-. .-+++++. +|++ |+.+-|...
T Consensus 66 DfvI~isPN~a~PGP~~ARE~l~~~~iP~IvI~D~p~~K 104 (283)
T 1qv9_A 66 DFIVYGGPNPAAPGPSKAREMLADSEYPAVIIGDAPGLK 104 (283)
T ss_dssp SEEEEECSCTTSHHHHHHHHHHHTSSSCEEEEEEGGGGG
T ss_pred CEEEEECCCCCCCCchHHHHHHHhCCCCEEEEcCCcchh
Confidence 7788888876543 33445553 4565 444555433
No 478
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=86.08 E-value=4.1 Score=35.27 Aligned_cols=75 Identities=8% Similarity=0.064 Sum_probs=43.5
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhh----h-cCCccccccCcchhhhhc--CCCcc
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARK----H-FADVECVWGDNGLEQIIK--EDSIL 75 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~ell~--~~~~D 75 (355)
.||..||||.-+. ...+.+..+..++++ +|.+++..+.+.+.+.. . .+.+.... .|..+.+. ....|
T Consensus 92 ~~VLdiG~G~G~~---~~~l~~~~~~~~v~~-vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~--~D~~~~l~~~~~~fD 165 (296)
T 1inl_A 92 KKVLIIGGGDGGT---LREVLKHDSVEKAIL-CEVDGLVIEAARKYLKQTSCGFDDPRAEIVI--ANGAEYVRKFKNEFD 165 (296)
T ss_dssp CEEEEEECTTCHH---HHHHTTSTTCSEEEE-EESCHHHHHHHHHHCHHHHGGGGCTTEEEEE--SCHHHHGGGCSSCEE
T ss_pred CEEEEEcCCcCHH---HHHHHhcCCCCEEEE-EECCHHHHHHHHHHhHhhccccCCCceEEEE--CcHHHHHhhCCCCce
Confidence 4899999996442 334444422246654 59999988877664322 1 23333222 56666554 34589
Q ss_pred EEEEecCC
Q 018445 76 GVAVVLAG 83 (355)
Q Consensus 76 ~V~I~tp~ 83 (355)
+|++-.+.
T Consensus 166 ~Ii~d~~~ 173 (296)
T 1inl_A 166 VIIIDSTD 173 (296)
T ss_dssp EEEEEC--
T ss_pred EEEEcCCC
Confidence 99986543
No 479
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=85.72 E-value=4.5 Score=31.71 Aligned_cols=72 Identities=15% Similarity=0.065 Sum_probs=43.3
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhc--CCccccccCcchhhhhcC-CCccEEEE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHF--ADVECVWGDNGLEQIIKE-DSILGVAV 79 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ell~~-~~~D~V~I 79 (355)
.+|.-+|||. |. ....+.+.. .+++++ |.+++..+.+.+...... +.+... ..|..+.+.+ ...|+|+.
T Consensus 35 ~~vldiG~G~-G~--~~~~l~~~~--~~v~~~-D~~~~~~~~a~~~~~~~~~~~~~~~~--~~d~~~~~~~~~~~D~v~~ 106 (192)
T 1l3i_A 35 DVAVDVGCGT-GG--VTLELAGRV--RRVYAI-DRNPEAISTTEMNLQRHGLGDNVTLM--EGDAPEALCKIPDIDIAVV 106 (192)
T ss_dssp CEEEEESCTT-SH--HHHHHHTTS--SEEEEE-ESCHHHHHHHHHHHHHTTCCTTEEEE--ESCHHHHHTTSCCEEEEEE
T ss_pred CEEEEECCCC-CH--HHHHHHHhc--CEEEEE-ECCHHHHHHHHHHHHHcCCCcceEEE--ecCHHHhcccCCCCCEEEE
Confidence 4789999997 53 333444333 466554 999998888776543331 122221 2566665544 57999887
Q ss_pred ecC
Q 018445 80 VLA 82 (355)
Q Consensus 80 ~tp 82 (355)
..+
T Consensus 107 ~~~ 109 (192)
T 1l3i_A 107 GGS 109 (192)
T ss_dssp SCC
T ss_pred CCc
Confidence 644
No 480
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=85.70 E-value=3 Score=34.73 Aligned_cols=74 Identities=14% Similarity=-0.010 Sum_probs=42.7
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcC--CccccccCcchhhhhc--------CC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFA--DVECVWGDNGLEQIIK--------ED 72 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ell~--------~~ 72 (355)
-+|.-||||.-.. -+......+++.+++++ |.+++..+.+.+.+++... .+... ..+..+.+. ..
T Consensus 72 ~~VLeiG~G~G~~--~~~la~~~~~~~~v~~i-D~~~~~~~~a~~~~~~~g~~~~i~~~--~gda~~~l~~l~~~~~~~~ 146 (237)
T 3c3y_A 72 KKTIEVGVFTGYS--LLLTALSIPDDGKITAI-DFDREAYEIGLPFIRKAGVEHKINFI--ESDAMLALDNLLQGQESEG 146 (237)
T ss_dssp CEEEEECCTTSHH--HHHHHHHSCTTCEEEEE-ESCHHHHHHHHHHHHHTTCGGGEEEE--ESCHHHHHHHHHHSTTCTT
T ss_pred CEEEEeCCCCCHH--HHHHHHhCCCCCEEEEE-ECCHHHHHHHHHHHHHcCCCCcEEEE--EcCHHHHHHHHHhccCCCC
Confidence 4788999995332 22223344433577665 9999998887765544311 12211 144444432 35
Q ss_pred CccEEEEec
Q 018445 73 SILGVAVVL 81 (355)
Q Consensus 73 ~~D~V~I~t 81 (355)
..|+|++-.
T Consensus 147 ~fD~I~~d~ 155 (237)
T 3c3y_A 147 SYDFGFVDA 155 (237)
T ss_dssp CEEEEEECS
T ss_pred CcCEEEECC
Confidence 699999853
No 481
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=85.61 E-value=0.3 Score=40.81 Aligned_cols=70 Identities=19% Similarity=0.232 Sum_probs=41.4
Q ss_pred ceEEEEe-cccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCcc---cccc-CcchhhhhcCCCccEE
Q 018445 3 PRIAILG-AGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVE---CVWG-DNGLEQIIKEDSILGV 77 (355)
Q Consensus 3 ~rigiiG-~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~ell~~~~~D~V 77 (355)
.+|.|.| +|.+|.. .+..|.+.+. .+|++ +++++++++.... .++. .... .++++++++. +|+|
T Consensus 24 k~vlVtGatG~iG~~-l~~~L~~~G~-~~V~~-~~R~~~~~~~~~~------~~~~~~~~Dl~d~~~~~~~~~~--~D~v 92 (236)
T 3qvo_A 24 KNVLILGAGGQIARH-VINQLADKQT-IKQTL-FARQPAKIHKPYP------TNSQIIMGDVLNHAALKQAMQG--QDIV 92 (236)
T ss_dssp EEEEEETTTSHHHHH-HHHHHTTCTT-EEEEE-EESSGGGSCSSCC------TTEEEEECCTTCHHHHHHHHTT--CSEE
T ss_pred cEEEEEeCCcHHHHH-HHHHHHhCCC-ceEEE-EEcChhhhccccc------CCcEEEEecCCCHHHHHHHhcC--CCEE
Confidence 3789999 6889975 7777776653 56654 5777776543211 0111 1110 0345566664 8999
Q ss_pred EEecCC
Q 018445 78 AVVLAG 83 (355)
Q Consensus 78 ~I~tp~ 83 (355)
+.+...
T Consensus 93 v~~a~~ 98 (236)
T 3qvo_A 93 YANLTG 98 (236)
T ss_dssp EEECCS
T ss_pred EEcCCC
Confidence 977654
No 482
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=85.58 E-value=4 Score=34.95 Aligned_cols=75 Identities=9% Similarity=-0.014 Sum_probs=44.6
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhh-----cCCccccccCcchhhhhc--CCCcc
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKH-----FADVECVWGDNGLEQIIK--EDSIL 75 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ell~--~~~~D 75 (355)
-||.+||||.-+ ....+.+..+..+++ .+|.+++-.+.+.+.+... .+.+.... .|..+.+. ....|
T Consensus 77 ~~VLdiG~G~G~---~~~~l~~~~~~~~v~-~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~--~D~~~~l~~~~~~fD 150 (275)
T 1iy9_A 77 EHVLVVGGGDGG---VIREILKHPSVKKAT-LVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQV--DDGFMHIAKSENQYD 150 (275)
T ss_dssp CEEEEESCTTCH---HHHHHTTCTTCSEEE-EEESCHHHHHHHHHHCHHHHTTTTSTTEEEEE--SCSHHHHHTCCSCEE
T ss_pred CEEEEECCchHH---HHHHHHhCCCCceEE-EEECCHHHHHHHHHHhHhhccccCCCceEEEE--CcHHHHHhhCCCCee
Confidence 489999999633 234444443324554 4599999888776643211 13333322 56666554 35699
Q ss_pred EEEEecCC
Q 018445 76 GVAVVLAG 83 (355)
Q Consensus 76 ~V~I~tp~ 83 (355)
+|++-.+.
T Consensus 151 ~Ii~d~~~ 158 (275)
T 1iy9_A 151 VIMVDSTE 158 (275)
T ss_dssp EEEESCSS
T ss_pred EEEECCCC
Confidence 99985544
No 483
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=85.57 E-value=2.6 Score=35.01 Aligned_cols=75 Identities=4% Similarity=-0.107 Sum_probs=41.8
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhc--CCccccccCcchhhhhc-----C--CC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHF--ADVECVWGDNGLEQIIK-----E--DS 73 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ell~-----~--~~ 73 (355)
-+|.-|||| .|.. -+......+.+.+++++ |.+++..+.+.+.+++.. +.+... ..+..+.+. + ..
T Consensus 74 ~~vLdiG~G-~G~~-~~~la~~~~~~~~v~~i-D~~~~~~~~a~~~~~~~g~~~~i~~~--~~d~~~~l~~l~~~~~~~~ 148 (232)
T 3cbg_A 74 KQVLEIGVF-RGYS-ALAMALQLPPDGQIIAC-DQDPNATAIAKKYWQKAGVAEKISLR--LGPALATLEQLTQGKPLPE 148 (232)
T ss_dssp CEEEEECCT-TSHH-HHHHHTTSCTTCEEEEE-ESCHHHHHHHHHHHHHHTCGGGEEEE--ESCHHHHHHHHHTSSSCCC
T ss_pred CEEEEecCC-CCHH-HHHHHHhCCCCCEEEEE-ECCHHHHHHHHHHHHHcCCCCcEEEE--EcCHHHHHHHHHhcCCCCC
Confidence 478899999 4532 22222334423577665 999998888776543331 112211 144444332 1 56
Q ss_pred ccEEEEecC
Q 018445 74 ILGVAVVLA 82 (355)
Q Consensus 74 ~D~V~I~tp 82 (355)
+|+|++..+
T Consensus 149 fD~V~~d~~ 157 (232)
T 3cbg_A 149 FDLIFIDAD 157 (232)
T ss_dssp EEEEEECSC
T ss_pred cCEEEECCC
Confidence 899987644
No 484
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=85.38 E-value=3.2 Score=34.39 Aligned_cols=73 Identities=15% Similarity=0.126 Sum_probs=44.4
Q ss_pred ceEEEEecccccchhccchhhh-cCCeEEEEEEEeCCHHHHHHHHHHHhhhc--CCccccccCcchhhhhc---CCCccE
Q 018445 3 PRIAILGAGIFVKTQYIPRLAE-ISDLVSLKFIWSRSEESAKSAAEVARKHF--ADVECVWGDNGLEQIIK---EDSILG 76 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~-~~~~~~vvai~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ell~---~~~~D~ 76 (355)
.+|.=||||. |. ....+.. .++ .+|+++ |.+++..+.+.+.+++.. +.+... ..|..+.+. +..+|+
T Consensus 73 ~~vLDiG~G~-G~--~~~~la~~~~~-~~v~~v-D~~~~~~~~a~~~~~~~~~~~~v~~~--~~d~~~~~~~~~~~~fD~ 145 (232)
T 3ntv_A 73 KNILEIGTAI-GY--SSMQFASISDD-IHVTTI-ERNETMIQYAKQNLATYHFENQVRII--EGNALEQFENVNDKVYDM 145 (232)
T ss_dssp CEEEEECCSS-SH--HHHHHHTTCTT-CEEEEE-ECCHHHHHHHHHHHHHTTCTTTEEEE--ESCGGGCHHHHTTSCEEE
T ss_pred CEEEEEeCch-hH--HHHHHHHhCCC-CEEEEE-ECCHHHHHHHHHHHHHcCCCCcEEEE--ECCHHHHHHhhccCCccE
Confidence 4788899995 43 2223333 333 677665 999999888877554442 123222 256656544 567999
Q ss_pred EEEecC
Q 018445 77 VAVVLA 82 (355)
Q Consensus 77 V~I~tp 82 (355)
|++..+
T Consensus 146 V~~~~~ 151 (232)
T 3ntv_A 146 IFIDAA 151 (232)
T ss_dssp EEEETT
T ss_pred EEEcCc
Confidence 987643
No 485
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=85.36 E-value=6 Score=30.37 Aligned_cols=101 Identities=17% Similarity=0.177 Sum_probs=53.5
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccc-------cCcchhhhhcCCCcc
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVW-------GDNGLEQIIKEDSIL 75 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ell~~~~~D 75 (355)
+||.||.-...-.......|...++ ..++..++...+..+.+.+ ..|++-..- +.+-++.+-+....-
T Consensus 26 ~~ILivdd~~~~~~~l~~~L~~~~~-~~~v~~~~~~~~al~~l~~----~~~dlvilD~~l~~~~g~~l~~~lr~~~~~~ 100 (164)
T 3t8y_A 26 IRVLVVDDSAFMRMVLKDIIDSQPD-MKVVGFAKDGLEAVEKAIE----LKPDVITMDIEMPNLNGIEALKLIMKKAPTR 100 (164)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTSTT-EEEEEEESSHHHHHHHHHH----HCCSEEEECSSCSSSCHHHHHHHHHHHSCCE
T ss_pred cEEEEEcCCHHHHHHHHHHHhcCCC-eEEEEecCCHHHHHHHhcc----CCCCEEEEeCCCCCCCHHHHHHHHHhcCCce
Confidence 4777777665444322333334443 5666666544444444433 212221100 001122222222345
Q ss_pred EEEEecCCcccHHHHHHHHHcCCeEEEecCCCC
Q 018445 76 GVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAA 108 (355)
Q Consensus 76 ~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~ 108 (355)
+|++++......+.+..++++|..=|+.||+..
T Consensus 101 ii~~s~~~~~~~~~~~~~~~~ga~~~l~KP~~~ 133 (164)
T 3t8y_A 101 VIMVSSLTEEGAAITIEALRNGAVDFITKPHGS 133 (164)
T ss_dssp EEEEESSCCTTCHHHHHHHHTTCCEEEECSSSS
T ss_pred EEEEecCCccchHHHHHHHHcCcCEEEeCCCCH
Confidence 566666556556778889999999999999874
No 486
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=85.26 E-value=3.5 Score=34.00 Aligned_cols=70 Identities=11% Similarity=-0.018 Sum_probs=43.8
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhc--CCccccccCcchhhhhcCCCccEEEEec
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHF--ADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
+|.=||||. |. ++..+.+ ++ .+++++ |.++...+.+.+...... ..+. +...|+.++..+...|+|+...
T Consensus 69 ~vLDiGcG~-G~--~~~~l~~-~~-~~v~gv-D~s~~~~~~a~~~~~~~~~~~~v~--~~~~d~~~~~~~~~fD~v~~~~ 140 (235)
T 3lcc_A 69 RALVPGCGG-GH--DVVAMAS-PE-RFVVGL-DISESALAKANETYGSSPKAEYFS--FVKEDVFTWRPTELFDLIFDYV 140 (235)
T ss_dssp EEEEETCTT-CH--HHHHHCB-TT-EEEEEE-CSCHHHHHHHHHHHTTSGGGGGEE--EECCCTTTCCCSSCEEEEEEES
T ss_pred CEEEeCCCC-CH--HHHHHHh-CC-CeEEEE-ECCHHHHHHHHHHhhccCCCcceE--EEECchhcCCCCCCeeEEEECh
Confidence 788899996 43 3444444 33 677665 999998888776543311 1122 2225677766666799888653
No 487
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=85.19 E-value=5.9 Score=35.17 Aligned_cols=56 Identities=13% Similarity=0.145 Sum_probs=51.0
Q ss_pred hhhcCCCccEEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhcc
Q 018445 67 QIIKEDSILGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSI 123 (355)
Q Consensus 67 ell~~~~~D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~ 123 (355)
+++++-++|+.=|++.+-.++++.+++.+.||+|++=.=++ |++|....++...+.
T Consensus 105 d~l~~~~v~~~KI~S~~~~N~pLL~~va~~gKPviLstGms-tl~Ei~~Ave~i~~~ 160 (350)
T 3g8r_A 105 DLIEAHGIEIIKIASCSFTDWPLLERIARSDKPVVASTAGA-RREDIDKVVSFMLHR 160 (350)
T ss_dssp HHHHHTTCCEEEECSSSTTCHHHHHHHHTSCSCEEEECTTC-CHHHHHHHHHHHHTT
T ss_pred HHHHHcCCCEEEECcccccCHHHHHHHHhhCCcEEEECCCC-CHHHHHHHHHHHHHc
Confidence 45565679999999999999999999999999999999998 999999999998885
No 488
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=85.11 E-value=0.59 Score=41.79 Aligned_cols=89 Identities=9% Similarity=0.088 Sum_probs=55.2
Q ss_pred eEEEEecccccchhccchhhhcCCeE-EEEEEEeCCHHHHHHHHHHHhhhcCCccccccC--cchhh----hhcCCCccE
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLV-SLKFIWSRSEESAKSAAEVARKHFADVECVWGD--NGLEQ----IIKEDSILG 76 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~-~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~e----ll~~~~~D~ 76 (355)
+|.|+|+|.+|.. .+..++..+ . +|++ .|+++++.+.+.+ . +....+.+ .++.+ +.....+|+
T Consensus 169 ~VlV~GaG~vG~~-a~qla~~~G--a~~Vi~-~~~~~~~~~~~~~----l--Ga~~vi~~~~~~~~~~v~~~t~g~g~D~ 238 (352)
T 3fpc_A 169 TVCVIGIGPVGLM-SVAGANHLG--AGRIFA-VGSRKHCCDIALE----Y--GATDIINYKNGDIVEQILKATDGKGVDK 238 (352)
T ss_dssp CEEEECCSHHHHH-HHHHHHTTT--CSSEEE-ECCCHHHHHHHHH----H--TCCEEECGGGSCHHHHHHHHTTTCCEEE
T ss_pred EEEEECCCHHHHH-HHHHHHHcC--CcEEEE-ECCCHHHHHHHHH----h--CCceEEcCCCcCHHHHHHHHcCCCCCCE
Confidence 6899999999974 555544443 5 5655 5888888776654 3 22222111 22222 222346999
Q ss_pred EEEecCCcccHHHHHHHHHcC-CeEEE
Q 018445 77 VAVVLAGQAQVDTSLKLLKAG-KHVIQ 102 (355)
Q Consensus 77 V~I~tp~~~H~~~~~~al~~G-khVl~ 102 (355)
|+-++......+.+..+++.| +-|++
T Consensus 239 v~d~~g~~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 239 VVIAGGDVHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp EEECSSCTTHHHHHHHHEEEEEEEEEC
T ss_pred EEECCCChHHHHHHHHHHhcCCEEEEe
Confidence 999998877777777777765 33433
No 489
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=85.09 E-value=1.9 Score=39.69 Aligned_cols=102 Identities=9% Similarity=0.047 Sum_probs=66.1
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeC----------CHHHHHHHHHHHhh--hcCCccccccCcchhhhhc
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSR----------SEESAKSAAEVARK--HFADVECVWGDNGLEQIIK 70 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~----------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ell~ 70 (355)
.||+|.|.|+.|.. .+..|.+.+ .+|++|+|. +.+.+.++.+.... .+++. .+ -+.+++++
T Consensus 236 ~~vaVqGfGnVG~~-~a~~L~e~G--akvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a--~~--i~~~ei~~ 308 (440)
T 3aog_A 236 ARVAIQGFGNVGNA-AARAFHDHG--ARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKA--EP--LPAADFWG 308 (440)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTT--CEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTS--EE--CCHHHHTT
T ss_pred CEEEEeccCHHHHH-HHHHHHHCC--CEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCc--eE--cCchhhhc
Confidence 58999999999975 566666654 799999998 67777776653110 12221 11 24577876
Q ss_pred CCCccEEEEecC-CcccHHHHHHHHHcCCeEEEec---CCCCCHHHHHHHHH
Q 018445 71 EDSILGVAVVLA-GQAQVDTSLKLLKAGKHVIQEK---PAAANISEIENALS 118 (355)
Q Consensus 71 ~~~~D~V~I~tp-~~~H~~~~~~al~~GkhVl~EK---P~a~~~~e~~~l~~ 118 (355)
.++|+++=|+. +..+.+-+... +..+++|= |++ .++.+++.
T Consensus 309 -~~~DIlvPcA~~n~i~~~na~~l---~ak~VvEgAN~p~t---~eA~~iL~ 353 (440)
T 3aog_A 309 -LPVEFLVPAALEKQITEQNAWRI---RARIVAEGANGPTT---PAADDILL 353 (440)
T ss_dssp -CCCSEEEECSSSSCBCTTTGGGC---CCSEEECCSSSCBC---HHHHHHHH
T ss_pred -CCCcEEEecCCcCccchhhHHHc---CCcEEEecCccccC---HHHHHHHH
Confidence 56999998754 44554444442 67788886 543 55666653
No 490
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=85.08 E-value=1.2 Score=37.20 Aligned_cols=76 Identities=16% Similarity=0.134 Sum_probs=41.2
Q ss_pred ceEEEE--ecccccchhccchhhhcCCeEEEEEEEeCCHH-HHHHHHHHHhhhcCCccccccC-c----------chhhh
Q 018445 3 PRIAIL--GAGIFVKTQYIPRLAEISDLVSLKFIWSRSEE-SAKSAAEVARKHFADVECVWGD-N----------GLEQI 68 (355)
Q Consensus 3 ~rigii--G~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~-~~~~~~~~~~~~~~~~~~~~~~-~----------~~~el 68 (355)
+||+|+ |.|..... .+..+.+...+.+|++|+...++ .....++ +. +++..+.. . .+-+.
T Consensus 23 ~rI~~l~SG~g~~~~~-~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~---~~--gIp~~~~~~~~~~~r~~~~~~~~~~ 96 (229)
T 3auf_A 23 IRIGVLISGSGTNLQA-ILDGCREGRIPGRVAVVISDRADAYGLERAR---RA--GVDALHMDPAAYPSRTAFDAALAER 96 (229)
T ss_dssp EEEEEEESSCCHHHHH-HHHHHHTTSSSEEEEEEEESSTTCHHHHHHH---HT--TCEEEECCGGGSSSHHHHHHHHHHH
T ss_pred cEEEEEEeCCcHHHHH-HHHHHHhCCCCCeEEEEEcCCCchHHHHHHH---Hc--CCCEEEECcccccchhhccHHHHHH
Confidence 599999 66655543 45555543213799887765433 2333333 34 55433210 1 12244
Q ss_pred hcCCCccEEEEecCCc
Q 018445 69 IKEDSILGVAVVLAGQ 84 (355)
Q Consensus 69 l~~~~~D~V~I~tp~~ 84 (355)
|+..++|+++++.-..
T Consensus 97 l~~~~~Dliv~agy~~ 112 (229)
T 3auf_A 97 LQAYGVDLVCLAGYMR 112 (229)
T ss_dssp HHHTTCSEEEESSCCS
T ss_pred HHhcCCCEEEEcChhH
Confidence 5556788888775433
No 491
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=85.02 E-value=3.8 Score=34.39 Aligned_cols=74 Identities=9% Similarity=-0.007 Sum_probs=42.5
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhc--CCccccccCcchhhhhc--------CC
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHF--ADVECVWGDNGLEQIIK--------ED 72 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ell~--------~~ 72 (355)
-+|.-||||.-.. -+......+.+.+|+++ |.+++..+.+.+.+++.. +.+... ..+..+.+. +.
T Consensus 81 ~~VLeiG~G~G~~--~~~la~~~~~~~~v~~i-D~s~~~~~~a~~~~~~~g~~~~i~~~--~gda~~~l~~l~~~~~~~~ 155 (247)
T 1sui_A 81 KNTMEIGVYTGYS--LLATALAIPEDGKILAM-DINKENYELGLPVIKKAGVDHKIDFR--EGPALPVLDEMIKDEKNHG 155 (247)
T ss_dssp CEEEEECCGGGHH--HHHHHHHSCTTCEEEEE-ESCCHHHHHHHHHHHHTTCGGGEEEE--ESCHHHHHHHHHHSGGGTT
T ss_pred CEEEEeCCCcCHH--HHHHHHhCCCCCEEEEE-ECCHHHHHHHHHHHHHcCCCCCeEEE--ECCHHHHHHHHHhccCCCC
Confidence 4788999995332 22222344423577665 999998887776554431 122211 145555432 45
Q ss_pred CccEEEEec
Q 018445 73 SILGVAVVL 81 (355)
Q Consensus 73 ~~D~V~I~t 81 (355)
..|+|++-.
T Consensus 156 ~fD~V~~d~ 164 (247)
T 1sui_A 156 SYDFIFVDA 164 (247)
T ss_dssp CBSEEEECS
T ss_pred CEEEEEEcC
Confidence 699999853
No 492
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=84.95 E-value=1.3 Score=39.34 Aligned_cols=89 Identities=15% Similarity=0.214 Sum_probs=52.4
Q ss_pred eEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccC--cchhhhhcC--CCccEEEE
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGD--NGLEQIIKE--DSILGVAV 79 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ell~~--~~~D~V~I 79 (355)
+|.|+|+|.+|.. .+..++..+ .+|++ .++++++.+.+.+ . +....+.+ .++.+.+.+ ..+|+|+.
T Consensus 167 ~VlV~GaG~vG~~-~~~~a~~~G--a~Vi~-~~~~~~~~~~~~~----l--Ga~~~~d~~~~~~~~~~~~~~~~~d~vid 236 (339)
T 1rjw_A 167 WVAIYGIGGLGHV-AVQYAKAMG--LNVVA-VDIGDEKLELAKE----L--GADLVVNPLKEDAAKFMKEKVGGVHAAVV 236 (339)
T ss_dssp EEEEECCSTTHHH-HHHHHHHTT--CEEEE-ECSCHHHHHHHHH----T--TCSEEECTTTSCHHHHHHHHHSSEEEEEE
T ss_pred EEEEECCCHHHHH-HHHHHHHcC--CEEEE-EeCCHHHHHHHHH----C--CCCEEecCCCccHHHHHHHHhCCCCEEEE
Confidence 7999999999974 555555543 67765 5778888876643 2 22211111 233222211 46999999
Q ss_pred ecCCcccHHHHHHHHHcC-CeEEE
Q 018445 80 VLAGQAQVDTSLKLLKAG-KHVIQ 102 (355)
Q Consensus 80 ~tp~~~H~~~~~~al~~G-khVl~ 102 (355)
++....-.+.+..+++.| +-|++
T Consensus 237 ~~g~~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 237 TAVSKPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp SSCCHHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCHHHHHHHHHHhhcCCEEEEe
Confidence 988655555555666554 43443
No 493
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=84.87 E-value=4.2 Score=34.27 Aligned_cols=71 Identities=11% Similarity=0.021 Sum_probs=44.1
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
.+|.-||||. |. ....+.+.. .+++++ |.++...+.+.+........+... ..+..+.+.+..+|+|+...
T Consensus 122 ~~VLDiGcG~-G~--l~~~la~~g--~~v~gv-Di~~~~v~~a~~n~~~~~~~v~~~--~~d~~~~~~~~~fD~Vv~n~ 192 (254)
T 2nxc_A 122 DKVLDLGTGS-GV--LAIAAEKLG--GKALGV-DIDPMVLPQAEANAKRNGVRPRFL--EGSLEAALPFGPFDLLVANL 192 (254)
T ss_dssp CEEEEETCTT-SH--HHHHHHHTT--CEEEEE-ESCGGGHHHHHHHHHHTTCCCEEE--ESCHHHHGGGCCEEEEEEEC
T ss_pred CEEEEecCCC-cH--HHHHHHHhC--CeEEEE-ECCHHHHHHHHHHHHHcCCcEEEE--ECChhhcCcCCCCCEEEECC
Confidence 4788999997 54 233344443 366655 999999888776554432122211 25666666556799998653
No 494
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=84.78 E-value=0.83 Score=42.40 Aligned_cols=143 Identities=20% Similarity=0.102 Sum_probs=70.5
Q ss_pred CCceEEEEecccccchhccchhhhcCCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhh---cCCCccEE
Q 018445 1 MAPRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQII---KEDSILGV 77 (355)
Q Consensus 1 m~~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell---~~~~~D~V 77 (355)
|.+||+|||.|..... ....+.+..+ ++++.+++.++..+ .++ +. ..+... +.+.++++ ...++|+|
T Consensus 23 m~~~IlIlG~g~r~~a-l~~~~a~~~g-~~~v~~~~~~~~~~-~~~----~~-~~~~~~--~~d~~~l~~~~~~~~~d~V 92 (452)
T 2qk4_A 23 MAARVLIIGSGGREHT-LAWKLAQSHH-VKQVLVAPGNAGTA-CSE----KI-SNTAIS--ISDHTALAQFCKEKKIEFV 92 (452)
T ss_dssp CSEEEEEEECSHHHHH-HHHHHTTCTT-EEEEEEEECCGGGS-BSS----SE-EECCCC--SSCHHHHHHHHHHHTCCEE
T ss_pred cCcEEEEECCCHHHHH-HHHHHHhcCC-CCEEEEECCChhhh-hhc----cc-cccccC--CCCHHHHHHHHHHcCCCEE
Confidence 6789999999953211 1223333334 77766655444322 111 11 011112 25555554 34669999
Q ss_pred EEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHH-HHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHHHHHHhC
Q 018445 78 AVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIE-NALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKKLIAEIG 156 (355)
Q Consensus 78 ~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~-~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~~i~~iG 156 (355)
+...-+..-..++..+-+.|.+++.-.|-+.....-+ .+.++++++ |+..--.. .+ .....+.+.++++|
T Consensus 93 ~~~~E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~------gip~p~~~--~~-~~~~~~~~~~~~~g 163 (452)
T 2qk4_A 93 VVGPEAPLAAGIVGNLRSAGVQCFGPTAEAAQLESSKRFAKEFMDRH------GIPTAQWK--AF-TKPEEACSFILSAD 163 (452)
T ss_dssp EECSSHHHHTTHHHHHHHTTCCEESCCTTTTHHHHBHHHHHHHHHHT------TCCBCCEE--EE-SSHHHHHHHHHHCS
T ss_pred EECCcHHHHHHHHHHHHhcCCcEeCcCHHHHHHhcCHHHHHHHHHHC------CCCCCCeE--EE-CCHHHHHHHHHhCC
Confidence 8643221111334444467888875544444333333 334566664 65532211 11 12344566666677
Q ss_pred Ce-eEEE
Q 018445 157 DM-MSVQ 162 (355)
Q Consensus 157 ~i-~~v~ 162 (355)
-+ .-+.
T Consensus 164 ~P~vvvK 170 (452)
T 2qk4_A 164 FPALVVK 170 (452)
T ss_dssp SCEEEEE
T ss_pred CCeEEEE
Confidence 66 5554
No 495
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=84.63 E-value=4.2 Score=34.51 Aligned_cols=110 Identities=14% Similarity=0.016 Sum_probs=60.7
Q ss_pred eEEEEecccccchhccchhhh-c-CCeEEEEEEEeCCHHHHHHHHHHHhhhcCCccccccCcchhhhhcCCCccEEEEec
Q 018445 4 RIAILGAGIFVKTQYIPRLAE-I-SDLVSLKFIWSRSEESAKSAAEVARKHFADVECVWGDNGLEQIIKEDSILGVAVVL 81 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~-~-~~~~~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ell~~~~~D~V~I~t 81 (355)
||.=||||. |. .+..|.+ . ..+++|+|| |.+++-.+.+.++...........+...|+.++- .++.|+|+...
T Consensus 73 ~vLDlGcGt-G~--~~~~la~~~~~~~~~v~gv-D~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~-~~~~d~v~~~~ 147 (261)
T 4gek_A 73 QVYDLGCSL-GA--ATLSVRRNIHHDNCKIIAI-DNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIA-IENASMVVLNF 147 (261)
T ss_dssp EEEEETCTT-TH--HHHHHHHTCCSSSCEEEEE-ESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCC-CCSEEEEEEES
T ss_pred EEEEEeCCC-CH--HHHHHHHhcCCCCCEEEEE-ECCHHHHHHHHHHHHhhccCceEEEeeccccccc-ccccccceeee
Confidence 788899995 43 2333332 2 123799887 9999988888776544432222222225666653 35688877643
Q ss_pred CC-ccc----HHHHH---HHHHc-CCeEEEecCCCCCHHHHHHHHH
Q 018445 82 AG-QAQ----VDTSL---KLLKA-GKHVIQEKPAAANISEIENALS 118 (355)
Q Consensus 82 p~-~~H----~~~~~---~al~~-GkhVl~EKP~a~~~~e~~~l~~ 118 (355)
-- ..+ ..+.. .+|+- |+=|+.|+-...+......+.+
T Consensus 148 ~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~ 193 (261)
T 4gek_A 148 TLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFN 193 (261)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHH
T ss_pred eeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHH
Confidence 21 111 12222 22333 4567888877666655444443
No 496
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=84.49 E-value=1.1 Score=40.23 Aligned_cols=89 Identities=11% Similarity=0.023 Sum_probs=54.2
Q ss_pred eEEEEecccccchhccchhhhcCCeE-EEEEEEeCCHHHHHHHHHHHhhhcCCccccccCc----chhhhhc---CCCcc
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLV-SLKFIWSRSEESAKSAAEVARKHFADVECVWGDN----GLEQIIK---EDSIL 75 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~-~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ell~---~~~~D 75 (355)
+|.|+|+|.+|.. .+..++..+ . +|++ .++++++.+.+.+ . ++...+.++ ++.+.+. ...+|
T Consensus 194 ~VlV~GaG~vG~~-aiqlak~~G--a~~Vi~-~~~~~~~~~~a~~----l--Ga~~vi~~~~~~~~~~~~i~~~t~gg~D 263 (373)
T 1p0f_A 194 TCAVFGLGGVGFS-AIVGCKAAG--ASRIIG-VGTHKDKFPKAIE----L--GATECLNPKDYDKPIYEVICEKTNGGVD 263 (373)
T ss_dssp EEEEECCSHHHHH-HHHHHHHHT--CSEEEE-ECSCGGGHHHHHH----T--TCSEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred EEEEECCCHHHHH-HHHHHHHcC--CCeEEE-ECCCHHHHHHHHH----c--CCcEEEecccccchHHHHHHHHhCCCCC
Confidence 6999999999974 555555544 4 5654 5778888776643 3 222221112 2333222 13699
Q ss_pred EEEEecCCcccHHHHHHHHHcC--CeEEE
Q 018445 76 GVAVVLAGQAQVDTSLKLLKAG--KHVIQ 102 (355)
Q Consensus 76 ~V~I~tp~~~H~~~~~~al~~G--khVl~ 102 (355)
+|+-++......+.+..+++.| +-|++
T Consensus 264 vvid~~g~~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 264 YAVECAGRIETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp EEEECSCCHHHHHHHHHTBCTTTCEEEEC
T ss_pred EEEECCCCHHHHHHHHHHHhcCCCEEEEE
Confidence 9999998766666667777654 44444
No 497
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=84.34 E-value=5.9 Score=36.51 Aligned_cols=108 Identities=13% Similarity=0.071 Sum_probs=66.5
Q ss_pred ceEEEEecccccchhccchhhhcCCeEEEEEEEeC-----------CHHHHHHHHHHHhhhcCCcc-------ccccCcc
Q 018445 3 PRIAILGAGIFVKTQYIPRLAEISDLVSLKFIWSR-----------SEESAKSAAEVARKHFADVE-------CVWGDNG 64 (355)
Q Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~~vvai~d~-----------~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 64 (355)
.+|.|.|.|.+|.. .+..|.+.+ .+||+++|. +++..+.+.+.-++....+. ..+ -+
T Consensus 231 ~~v~VqG~GnVG~~-~a~~L~~~G--akvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y~~~~~a~~--i~ 305 (449)
T 1bgv_A 231 KTVALAGFGNVAWG-AAKKLAELG--AKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKFGVQF--FP 305 (449)
T ss_dssp CEEEECCSSHHHHH-HHHHHHHHT--CEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHHTCEE--EE
T ss_pred CEEEEECCCHHHHH-HHHHHHHCC--CEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhcccccCCEE--eC
Confidence 48999999999975 455555554 799999993 55554444432111100110 111 12
Q ss_pred hhhhhcCCCccEEEEe-cCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHH
Q 018445 65 LEQIIKEDSILGVAVV-LAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENA 116 (355)
Q Consensus 65 ~~ell~~~~~D~V~I~-tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l 116 (355)
-++++. .++|+.+=| +++..+.+-+......|..+++|--=..+..++.++
T Consensus 306 ~~e~~~-~~~Dil~P~A~~~~I~~~na~~l~a~g~kiV~EgAN~p~T~eA~~~ 357 (449)
T 1bgv_A 306 GEKPWG-QKVDIIMPCATQNDVDLEQAKKIVANNVKYYIEVANMPTTNEALRF 357 (449)
T ss_dssp TCCGGG-SCCSEEECCSCTTCBCHHHHHHHHHTTCCEEECCSSSCBCHHHHHH
T ss_pred chhhhc-CCcceeeccccccccchhhHHHHHhcCCeEEEeCCCCcCCHHHHHH
Confidence 345665 568988855 566788888888777899999998222223445433
No 498
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=84.30 E-value=1.6 Score=39.04 Aligned_cols=129 Identities=9% Similarity=0.070 Sum_probs=71.1
Q ss_pred eEEEEecccccchhccchhhhcCCeE-EEEEEEeCCHHHHHHHHHHHhhhcCCccccccCc-----c-hhhhhc--CCCc
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLV-SLKFIWSRSEESAKSAAEVARKHFADVECVWGDN-----G-LEQIIK--EDSI 74 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~-~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~ell~--~~~~ 74 (355)
+|.|+|+|.+|.. .+..++..+ . +|+++ ++++++.+.+.+ . +....+.++ + .+++.+ ...+
T Consensus 174 ~VlV~GaG~vG~~-aiqlak~~G--a~~Vi~~-~~~~~~~~~a~~----l--Ga~~vi~~~~~~~~~~~~~i~~~~~~g~ 243 (356)
T 1pl8_A 174 KVLVCGAGPIGMV-TLLVAKAMG--AAQVVVT-DLSATRLSKAKE----I--GADLVLQISKESPQEIARKVEGQLGCKP 243 (356)
T ss_dssp EEEEECCSHHHHH-HHHHHHHTT--CSEEEEE-ESCHHHHHHHHH----T--TCSEEEECSSCCHHHHHHHHHHHHTSCC
T ss_pred EEEEECCCHHHHH-HHHHHHHcC--CCEEEEE-CCCHHHHHHHHH----h--CCCEEEcCcccccchHHHHHHHHhCCCC
Confidence 6899999999974 555555443 5 66554 678888776543 3 222222112 1 122222 1469
Q ss_pred cEEEEecCCcccHHHHHHHHHcC-CeEEE---ecCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccCchHHHHHHH
Q 018445 75 LGVAVVLAGQAQVDTSLKLLKAG-KHVIQ---EKPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRFEPAFVECKK 150 (355)
Q Consensus 75 D~V~I~tp~~~H~~~~~~al~~G-khVl~---EKP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~~p~~~~~k~ 150 (355)
|+|+.++......+.+..+++.| +-|++ .+|...+.. .+..+ ++.+. +. +++...+..+.+
T Consensus 244 D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~------~~~~~-------~~~i~-g~-~~~~~~~~~~~~ 308 (356)
T 1pl8_A 244 EVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLL------HAAIR-------EVDIK-GV-FRYCNTWPVAIS 308 (356)
T ss_dssp SEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHH------HHHHT-------TCEEE-EC-CSCSSCHHHHHH
T ss_pred CEEEECCCChHHHHHHHHHhcCCCEEEEEecCCCCCccCHH------HHHhc-------ceEEE-Ee-cccHHHHHHHHH
Confidence 99999998766666677777665 33333 233334432 22222 33333 22 233455677777
Q ss_pred HHHHhCCe
Q 018445 151 LIAEIGDM 158 (355)
Q Consensus 151 ~i~~iG~i 158 (355)
++++ |++
T Consensus 309 l~~~-g~i 315 (356)
T 1pl8_A 309 MLAS-KSV 315 (356)
T ss_dssp HHHT-TSC
T ss_pred HHHc-CCC
Confidence 7776 554
No 499
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=84.28 E-value=0.94 Score=40.36 Aligned_cols=130 Identities=9% Similarity=0.051 Sum_probs=71.7
Q ss_pred eEEEEecccccchhccchhhhcCCeE-EEEEEEeCCHHHHHHHHHHHhhhcCCcccccc--Ccchhhhh----cCCCccE
Q 018445 4 RIAILGAGIFVKTQYIPRLAEISDLV-SLKFIWSRSEESAKSAAEVARKHFADVECVWG--DNGLEQII----KEDSILG 76 (355)
Q Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~-~vvai~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ell----~~~~~D~ 76 (355)
+|.|+|+|.+|.. .+..++..+ . +|++ .++++++.+.+.+ . +....+. ..++.+.+ ....+|+
T Consensus 170 ~VlV~GaG~vG~~-~~q~a~~~G--a~~Vi~-~~~~~~~~~~~~~----~--Ga~~~~~~~~~~~~~~v~~~~~g~g~D~ 239 (348)
T 2d8a_A 170 SVLITGAGPLGLL-GIAVAKASG--AYPVIV-SEPSDFRRELAKK----V--GADYVINPFEEDVVKEVMDITDGNGVDV 239 (348)
T ss_dssp CEEEECCSHHHHH-HHHHHHHTT--CCSEEE-ECSCHHHHHHHHH----H--TCSEEECTTTSCHHHHHHHHTTTSCEEE
T ss_pred EEEEECCCHHHHH-HHHHHHHcC--CCEEEE-ECCCHHHHHHHHH----h--CCCEEECCCCcCHHHHHHHHcCCCCCCE
Confidence 6899999999974 566555543 5 6655 4778888776654 2 2221111 12333322 2246999
Q ss_pred EEEecCCcccHHHHHHHHHcC-CeEEEe---cCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEEecccC-chHHHHHHHH
Q 018445 77 VAVVLAGQAQVDTSLKLLKAG-KHVIQE---KPAAANISEIENALSRYNSICPDPPGQPIWAVAENYRF-EPAFVECKKL 151 (355)
Q Consensus 77 V~I~tp~~~H~~~~~~al~~G-khVl~E---KP~a~~~~e~~~l~~~a~~~~~~~~~~~~~~v~~~~r~-~p~~~~~k~~ 151 (355)
|+.++......+.+..+++.| +=|++- +|...+.. ..+..+ ++.+ .+...+. ...+..+.++
T Consensus 240 vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~-----~~~~~~-------~~~i-~g~~~~~~~~~~~~~~~l 306 (348)
T 2d8a_A 240 FLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFN-----NLIIFK-------ALTI-YGITGRHLWETWYTVSRL 306 (348)
T ss_dssp EEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHH-----HHTTTT-------TCEE-EECCCCCSHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCcccCch-----HHHHhC-------CcEE-EEecCCCcHHHHHHHHHH
Confidence 999998766666666666654 334332 23333320 112222 4443 4443333 4556677777
Q ss_pred HHHhCC
Q 018445 152 IAEIGD 157 (355)
Q Consensus 152 i~~iG~ 157 (355)
+++ |+
T Consensus 307 ~~~-g~ 311 (348)
T 2d8a_A 307 LQS-GK 311 (348)
T ss_dssp HHH-TC
T ss_pred HHc-CC
Confidence 776 54
No 500
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=84.26 E-value=3.3 Score=36.80 Aligned_cols=56 Identities=11% Similarity=0.041 Sum_probs=50.5
Q ss_pred hhhcCCCccEEEEecCCcccHHHHHHHHHcCCeEEEecCCCCCHHHHHHHHHHhhcc
Q 018445 67 QIIKEDSILGVAVVLAGQAQVDTSLKLLKAGKHVIQEKPAAANISEIENALSRYNSI 123 (355)
Q Consensus 67 ell~~~~~D~V~I~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~ 123 (355)
+++++-++|+.=|++.+-.++++.+++.+.||+|++=.-++ |++|....++..++.
T Consensus 118 d~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkPviLstGma-t~~Ei~~Ave~i~~~ 173 (349)
T 2wqp_A 118 LRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMN-SIESIKKSVEIIREA 173 (349)
T ss_dssp HHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTC-CHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCC-CHHHHHHHHHHHHHc
Confidence 34554568999999999999999999999999999999998 999999999999885
Done!