Query 018446
Match_columns 355
No_of_seqs 217 out of 1244
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 15:24:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018446.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018446hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a29_A Engineered retro-aldol 100.0 6.3E-66 2.2E-70 487.1 19.4 199 123-339 5-203 (258)
2 3tsm_A IGPS, indole-3-glycerol 100.0 1.5E-64 5.1E-69 480.2 22.6 215 121-338 4-218 (272)
3 1pii_A N-(5'phosphoribosyl)ant 100.0 1.7E-62 5.7E-67 494.0 18.4 206 124-339 2-207 (452)
4 1i4n_A Indole-3-glycerol phosp 100.0 5.1E-62 1.7E-66 458.2 19.2 201 125-339 1-201 (251)
5 3qja_A IGPS, indole-3-glycerol 100.0 5.9E-60 2E-64 447.1 20.4 208 123-337 3-210 (272)
6 1vc4_A Indole-3-glycerol phosp 100.0 3.1E-54 1.1E-58 403.4 18.1 198 120-337 5-202 (254)
7 2yzr_A Pyridoxal biosynthesis 99.9 2E-26 6.8E-31 224.2 -9.6 131 196-331 23-221 (330)
8 3q58_A N-acetylmannosamine-6-p 99.9 1.2E-22 4.2E-27 187.3 11.4 146 178-335 19-179 (229)
9 4adt_A Pyridoxine biosynthetic 99.9 7.7E-24 2.6E-28 203.2 1.4 120 190-318 21-154 (297)
10 3igs_A N-acetylmannosamine-6-p 99.9 3.4E-22 1.2E-26 184.5 11.4 145 179-335 20-179 (232)
11 1hg3_A Triosephosphate isomera 99.8 3.4E-20 1.2E-24 171.9 8.9 114 220-337 41-173 (225)
12 1w0m_A TIM, triosephosphate is 99.8 3E-20 1E-24 172.4 4.6 114 220-337 38-170 (226)
13 2h6r_A Triosephosphate isomera 99.7 4.1E-17 1.4E-21 148.8 5.4 113 220-336 35-166 (219)
14 2nv1_A Pyridoxal biosynthesis 99.5 4.2E-15 1.4E-19 140.7 2.5 117 192-315 24-151 (305)
15 3o07_A Pyridoxine biosynthesis 99.4 7E-15 2.4E-19 140.9 -2.9 111 199-315 20-141 (291)
16 2w6r_A Imidazole glycerol phos 99.4 9.1E-13 3.1E-17 120.4 8.8 144 190-336 23-198 (266)
17 2y88_A Phosphoribosyl isomeras 99.3 2E-12 6.7E-17 116.5 8.0 135 198-336 32-191 (244)
18 1thf_D HISF protein; thermophI 99.3 3.4E-11 1.1E-15 109.0 11.9 141 194-336 27-193 (253)
19 1yxy_A Putative N-acetylmannos 99.2 5.2E-11 1.8E-15 107.2 11.9 128 198-335 37-184 (234)
20 1y0e_A Putative N-acetylmannos 99.2 1.7E-11 5.7E-16 109.2 8.4 133 193-335 19-172 (223)
21 1ka9_F Imidazole glycerol phos 99.2 5.1E-11 1.7E-15 107.7 10.0 139 195-336 29-194 (252)
22 1vzw_A Phosphoribosyl isomeras 99.2 2.5E-11 8.4E-16 109.8 7.3 135 198-336 33-188 (244)
23 1qo2_A Molecule: N-((5-phospho 99.0 8.9E-11 3E-15 106.3 1.6 135 197-336 30-186 (241)
24 2v82_A 2-dehydro-3-deoxy-6-pho 98.9 4.7E-09 1.6E-13 93.1 9.1 125 198-337 20-145 (212)
25 1h5y_A HISF; histidine biosynt 98.8 2E-08 6.8E-13 89.1 10.3 138 195-336 31-196 (253)
26 2zbt_A Pyridoxal biosynthesis 98.8 1.2E-09 4.2E-14 102.3 1.9 112 200-317 31-153 (297)
27 1wa3_A 2-keto-3-deoxy-6-phosph 98.7 3.7E-08 1.3E-12 86.7 9.4 135 178-336 11-147 (205)
28 2qjg_A Putative aldolase MJ040 98.7 5.2E-09 1.8E-13 96.2 3.4 145 177-336 26-200 (273)
29 1p0k_A Isopentenyl-diphosphate 98.7 7.9E-08 2.7E-12 92.2 10.6 124 193-318 123-282 (349)
30 3tdn_A FLR symmetric alpha-bet 98.6 3E-08 1E-12 90.2 5.5 138 195-336 33-198 (247)
31 1gox_A (S)-2-hydroxy-acid oxid 98.6 2.8E-08 9.4E-13 97.0 5.3 151 180-336 114-276 (370)
32 3f4w_A Putative hexulose 6 pho 98.3 5E-07 1.7E-11 79.6 4.7 131 200-335 16-155 (211)
33 1wbh_A KHG/KDPG aldolase; lyas 97.8 0.00017 6E-09 65.5 12.5 119 178-315 17-135 (214)
34 1xi3_A Thiamine phosphate pyro 97.8 9.3E-05 3.2E-09 64.6 9.3 121 198-335 27-159 (215)
35 4e38_A Keto-hydroxyglutarate-a 97.7 0.00029 1E-08 65.5 11.6 118 178-315 35-153 (232)
36 1vhc_A Putative KHG/KDPG aldol 97.6 0.00024 8.3E-09 65.2 9.9 119 178-315 18-136 (224)
37 3o63_A Probable thiamine-phosp 97.6 4E-05 1.4E-09 71.3 3.7 125 198-335 44-186 (243)
38 1mxs_A KDPG aldolase; 2-keto-3 97.5 0.00031 1.1E-08 64.5 9.6 119 178-315 27-145 (225)
39 2yw3_A 4-hydroxy-2-oxoglutarat 97.4 0.00074 2.5E-08 60.8 10.2 117 178-315 14-130 (207)
40 1ypf_A GMP reductase; GUAC, pu 97.2 0.00064 2.2E-08 65.2 7.8 127 198-326 106-249 (336)
41 4avf_A Inosine-5'-monophosphat 97.1 0.0012 4.2E-08 66.6 9.3 128 197-326 228-371 (490)
42 1vrd_A Inosine-5'-monophosphat 97.0 0.0027 9.1E-08 63.4 10.0 118 197-317 236-370 (494)
43 3lab_A Putative KDPG (2-keto-3 97.0 0.0035 1.2E-07 57.9 9.8 119 178-315 14-138 (217)
44 4fxs_A Inosine-5'-monophosphat 96.9 0.0027 9.2E-08 64.3 9.6 128 197-326 230-373 (496)
45 1jcn_A Inosine monophosphate d 96.9 0.0042 1.4E-07 62.4 10.9 125 197-324 254-395 (514)
46 3usb_A Inosine-5'-monophosphat 96.8 0.0037 1.3E-07 63.5 9.8 128 197-326 255-398 (511)
47 1geq_A Tryptophan synthase alp 96.8 0.0015 5.2E-08 58.7 6.0 128 175-315 3-162 (248)
48 2qr6_A IMP dehydrogenase/GMP r 96.8 0.0049 1.7E-07 59.9 9.9 124 198-324 166-314 (393)
49 3vkj_A Isopentenyl-diphosphate 96.7 0.011 3.9E-07 57.9 11.7 122 197-320 135-300 (368)
50 2c6q_A GMP reductase 2; TIM ba 96.6 0.0069 2.4E-07 58.8 9.3 122 201-325 121-261 (351)
51 1yad_A Regulatory protein TENI 96.4 0.0047 1.6E-07 54.8 6.1 101 203-318 35-139 (221)
52 1zfj_A Inosine monophosphate d 96.4 0.0099 3.4E-07 59.1 9.0 122 198-322 233-371 (491)
53 1ka9_F Imidazole glycerol phos 96.4 0.0085 2.9E-07 53.7 7.7 92 197-290 152-248 (252)
54 2tps_A Protein (thiamin phosph 96.3 0.014 4.8E-07 51.4 8.8 123 199-336 33-169 (227)
55 3ajx_A 3-hexulose-6-phosphate 96.3 0.0049 1.7E-07 53.8 5.7 109 200-315 16-133 (207)
56 4fo4_A Inosine 5'-monophosphat 96.3 0.013 4.3E-07 57.6 9.0 125 199-325 109-249 (366)
57 3khj_A Inosine-5-monophosphate 96.3 0.017 5.9E-07 56.4 9.9 122 200-324 107-244 (361)
58 1eep_A Inosine 5'-monophosphat 96.2 0.013 4.6E-07 57.1 8.9 118 198-318 153-287 (404)
59 3sgz_A Hydroxyacid oxidase 2; 96.2 0.03 1E-06 54.9 11.4 95 221-318 198-303 (352)
60 3sr7_A Isopentenyl-diphosphate 96.2 0.008 2.7E-07 59.1 7.2 153 197-352 155-358 (365)
61 1thf_D HISF protein; thermophI 96.2 0.012 4.2E-07 52.7 7.7 93 197-291 151-248 (253)
62 2w6r_A Imidazole glycerol phos 96.1 0.011 3.8E-07 53.5 6.9 91 197-289 156-251 (266)
63 2nli_A Lactate oxidase; flavoe 96.0 0.028 9.6E-07 54.9 10.1 92 224-318 215-315 (368)
64 1h5y_A HISF; histidine biosynt 95.9 0.018 6.2E-07 50.6 7.4 93 197-291 154-251 (253)
65 3ffs_A Inosine-5-monophosphate 95.9 0.018 6.1E-07 57.3 8.1 124 200-326 146-285 (400)
66 1jub_A Dihydroorotate dehydrog 95.8 0.026 9.1E-07 52.6 8.4 119 198-320 107-275 (311)
67 3r2g_A Inosine 5'-monophosphat 95.8 0.018 6.3E-07 56.6 7.5 123 198-324 100-236 (361)
68 1xm3_A Thiazole biosynthesis p 95.7 0.025 8.4E-07 52.6 7.7 134 178-315 4-153 (264)
69 1rpx_A Protein (ribulose-phosp 95.7 0.02 6.8E-07 51.0 6.7 117 198-316 24-150 (230)
70 1me8_A Inosine-5'-monophosphat 95.6 0.023 7.9E-07 57.3 7.8 125 197-323 241-388 (503)
71 1wv2_A Thiazole moeity, thiazo 95.6 0.034 1.2E-06 52.9 8.2 74 198-273 145-221 (265)
72 1h1y_A D-ribulose-5-phosphate 95.5 0.11 3.7E-06 46.6 11.1 120 198-320 20-149 (228)
73 1vcf_A Isopentenyl-diphosphate 95.5 0.038 1.3E-06 52.5 8.4 122 197-321 132-290 (332)
74 1vzw_A Phosphoribosyl isomeras 95.4 0.022 7.4E-07 51.0 6.1 94 190-284 139-239 (244)
75 1kbi_A Cytochrome B2, L-LCR; f 95.2 0.086 2.9E-06 53.7 10.3 92 227-321 332-437 (511)
76 2cu0_A Inosine-5'-monophosphat 95.1 0.039 1.3E-06 55.2 7.5 121 200-325 230-366 (486)
77 1rd5_A Tryptophan synthase alp 95.1 0.012 4E-07 53.8 3.5 122 175-306 16-164 (262)
78 2wqp_A Polysialic acid capsule 95.1 0.025 8.5E-07 55.6 5.9 53 272-325 88-140 (349)
79 3ovp_A Ribulose-phosphate 3-ep 95.0 0.13 4.3E-06 47.1 9.9 127 186-318 7-143 (228)
80 1tqj_A Ribulose-phosphate 3-ep 94.9 0.05 1.7E-06 49.4 7.1 129 187-321 8-146 (230)
81 3g8r_A Probable spore coat pol 94.8 0.08 2.7E-06 52.1 8.6 54 271-325 74-127 (350)
82 1yxy_A Putative N-acetylmannos 94.7 0.69 2.3E-05 41.0 13.8 134 178-317 71-216 (234)
83 3ctl_A D-allulose-6-phosphate 94.7 0.063 2.2E-06 49.3 7.1 126 187-320 4-139 (231)
84 2fli_A Ribulose-phosphate 3-ep 94.7 0.063 2.2E-06 47.0 6.9 112 198-313 17-135 (220)
85 2nzl_A Hydroxyacid oxidase 1; 94.6 0.13 4.3E-06 50.8 9.4 93 225-320 239-340 (392)
86 3jr2_A Hexulose-6-phosphate sy 94.6 0.02 6.8E-07 51.2 3.4 112 200-315 22-138 (218)
87 1qop_A Tryptophan synthase alp 94.3 0.06 2E-06 49.8 5.9 124 175-307 15-169 (268)
88 2zbt_A Pyridoxal biosynthesis 94.1 0.077 2.6E-06 49.3 6.4 114 197-320 133-286 (297)
89 2e6f_A Dihydroorotate dehydrog 94.1 0.074 2.5E-06 49.6 6.3 121 198-320 107-277 (314)
90 3nvt_A 3-deoxy-D-arabino-heptu 94.1 0.049 1.7E-06 54.0 5.2 68 255-324 163-240 (385)
91 1vli_A Spore coat polysacchari 94.0 0.036 1.2E-06 55.1 4.1 54 271-325 97-150 (385)
92 2ekc_A AQ_1548, tryptophan syn 93.9 0.2 6.8E-06 46.3 8.7 121 176-306 16-168 (262)
93 1y0e_A Putative N-acetylmannos 93.8 1.7 5.7E-05 38.0 14.2 146 162-316 46-204 (223)
94 1zco_A 2-dehydro-3-deoxyphosph 93.7 0.064 2.2E-06 50.3 4.9 49 274-324 73-121 (262)
95 3f4w_A Putative hexulose 6 pho 93.7 0.037 1.3E-06 48.3 3.2 78 198-276 115-195 (211)
96 3inp_A D-ribulose-phosphate 3- 93.6 0.1 3.4E-06 48.7 6.2 128 185-317 29-164 (246)
97 1jvn_A Glutamine, bifunctional 93.5 0.076 2.6E-06 54.4 5.6 139 197-337 280-495 (555)
98 3zwt_A Dihydroorotate dehydrog 93.5 0.1 3.6E-06 51.0 6.3 74 198-272 235-331 (367)
99 1ep3_A Dihydroorotate dehydrog 93.5 0.2 6.8E-06 46.2 7.9 120 199-321 113-275 (311)
100 3bo9_A Putative nitroalkan dio 93.4 0.31 1E-05 46.4 9.2 113 198-323 39-158 (326)
101 1ep3_A Dihydroorotate dehydrog 93.4 0.061 2.1E-06 49.6 4.2 74 198-272 177-274 (311)
102 1ypf_A GMP reductase; GUAC, pu 93.1 0.079 2.7E-06 50.6 4.6 71 201-272 161-243 (336)
103 3gr7_A NADPH dehydrogenase; fl 93.1 0.18 6.3E-06 48.5 7.2 91 197-290 229-327 (340)
104 1qo2_A Molecule: N-((5-phospho 93.0 0.069 2.4E-06 47.8 4.0 87 196-283 143-239 (241)
105 3qja_A IGPS, indole-3-glycerol 93.0 0.12 4.3E-06 48.5 5.8 84 198-284 171-258 (272)
106 2y88_A Phosphoribosyl isomeras 93.0 0.12 4.2E-06 45.9 5.5 85 198-283 150-241 (244)
107 2htm_A Thiazole biosynthesis p 92.9 0.21 7.3E-06 47.6 7.2 75 198-273 134-212 (268)
108 3tdn_A FLR symmetric alpha-bet 92.8 0.019 6.6E-07 51.8 0.0 81 196-277 155-238 (247)
109 3i65_A Dihydroorotate dehydrog 92.8 0.089 3E-06 52.7 4.8 74 198-272 284-378 (415)
110 1to3_A Putative aldolase YIHT; 92.8 0.05 1.7E-06 51.9 2.8 114 197-317 48-198 (304)
111 1vrd_A Inosine-5'-monophosphat 92.8 0.14 4.8E-06 51.0 6.1 123 193-318 170-308 (494)
112 2gjl_A Hypothetical protein PA 92.7 0.45 1.5E-05 44.8 9.2 117 187-320 21-149 (328)
113 4adt_A Pyridoxine biosynthetic 92.6 0.038 1.3E-06 52.9 1.8 90 224-322 193-288 (297)
114 2pgw_A Muconate cycloisomerase 92.6 0.54 1.8E-05 45.2 9.7 92 199-295 206-299 (384)
115 3lmz_A Putative sugar isomeras 92.6 0.56 1.9E-05 41.5 9.2 117 196-316 29-161 (257)
116 1jvn_A Glutamine, bifunctional 92.5 0.26 9E-06 50.4 7.9 92 197-290 452-549 (555)
117 1gox_A (S)-2-hydroxy-acid oxid 92.5 0.3 1E-05 47.3 7.9 89 226-317 213-310 (370)
118 3igs_A N-acetylmannosamine-6-p 92.5 0.43 1.5E-05 43.5 8.5 74 201-276 140-218 (232)
119 2nv1_A Pyridoxal biosynthesis 92.2 0.58 2E-05 43.8 9.2 115 198-322 134-288 (305)
120 3nav_A Tryptophan synthase alp 92.1 0.087 3E-06 49.7 3.5 125 175-307 18-172 (271)
121 4ef8_A Dihydroorotate dehydrog 92.1 0.084 2.9E-06 51.6 3.5 81 193-273 200-311 (354)
122 3khj_A Inosine-5-monophosphate 92.0 0.47 1.6E-05 46.2 8.7 84 230-315 87-172 (361)
123 1jub_A Dihydroorotate dehydrog 92.0 0.061 2.1E-06 50.1 2.2 73 199-272 174-275 (311)
124 1f76_A Dihydroorotate dehydrog 91.9 0.36 1.2E-05 45.5 7.5 116 199-316 152-318 (336)
125 2q02_A Putative cytoplasmic pr 91.9 0.93 3.2E-05 39.8 9.8 64 251-315 88-167 (272)
126 3b0p_A TRNA-dihydrouridine syn 91.8 0.21 7.1E-06 48.1 5.8 73 198-272 145-229 (350)
127 1f76_A Dihydroorotate dehydrog 91.8 0.13 4.3E-06 48.7 4.2 74 198-272 226-322 (336)
128 2p10_A MLL9387 protein; putati 91.8 0.22 7.5E-06 47.9 5.8 116 201-318 39-192 (286)
129 1pii_A N-(5'phosphoribosyl)ant 91.8 0.48 1.7E-05 47.8 8.6 154 176-354 157-312 (452)
130 3vnd_A TSA, tryptophan synthas 91.8 0.14 4.6E-06 48.3 4.3 125 175-307 16-170 (267)
131 3ffs_A Inosine-5-monophosphate 91.7 0.26 8.9E-06 49.0 6.6 138 160-316 55-212 (400)
132 3p6l_A Sugar phosphate isomera 91.4 1.3 4.3E-05 39.1 10.1 59 253-315 96-161 (262)
133 2nli_A Lactate oxidase; flavoe 91.4 0.28 9.4E-06 47.9 6.2 70 200-270 240-315 (368)
134 2ovl_A Putative racemase; stru 91.3 0.8 2.8E-05 43.8 9.3 101 199-306 207-309 (371)
135 2o55_A Putative glycerophospho 91.2 1.7 5.7E-05 39.3 10.9 126 176-316 108-244 (258)
136 3hgj_A Chromate reductase; TIM 91.2 0.22 7.5E-06 47.9 5.2 90 198-290 240-338 (349)
137 1rd5_A Tryptophan synthase alp 91.2 0.3 1E-05 44.4 5.9 71 200-272 156-234 (262)
138 1p4c_A L(+)-mandelate dehydrog 91.1 0.22 7.5E-06 48.6 5.3 90 226-318 213-309 (380)
139 3bw2_A 2-nitropropane dioxygen 91.0 1.6 5.3E-05 41.9 11.1 65 251-320 112-176 (369)
140 3q58_A N-acetylmannosamine-6-p 91.0 0.7 2.4E-05 42.1 8.1 74 201-276 140-218 (229)
141 3cwo_X Beta/alpha-barrel prote 90.5 0.77 2.6E-05 39.0 7.6 94 197-291 130-227 (237)
142 1mdl_A Mandelate racemase; iso 90.4 0.53 1.8E-05 44.7 7.1 95 199-300 205-301 (359)
143 3dx5_A Uncharacterized protein 90.4 0.51 1.7E-05 42.0 6.6 63 253-315 89-169 (286)
144 1rvk_A Isomerase/lactonizing e 90.4 1.3 4.4E-05 42.4 9.8 91 199-294 216-309 (382)
145 2og9_A Mandelate racemase/muco 90.3 0.92 3.2E-05 43.9 8.8 97 199-302 223-321 (393)
146 1tv5_A Dhodehase, dihydroorota 90.3 0.24 8.3E-06 49.8 4.8 74 198-272 312-406 (443)
147 2agk_A 1-(5-phosphoribosyl)-5- 90.2 0.34 1.2E-05 45.0 5.4 132 195-337 36-200 (260)
148 3iwp_A Copper homeostasis prot 90.2 0.52 1.8E-05 45.2 6.8 126 202-335 51-204 (287)
149 2rdx_A Mandelate racemase/muco 90.2 0.89 3E-05 43.6 8.5 88 199-294 205-294 (379)
150 1mzh_A Deoxyribose-phosphate a 89.9 0.46 1.6E-05 42.9 5.9 64 198-264 133-200 (225)
151 2qgy_A Enolase from the enviro 89.9 0.91 3.1E-05 43.9 8.3 93 199-298 210-304 (391)
152 1nu5_A Chloromuconate cycloiso 89.8 1.3 4.5E-05 42.2 9.3 92 199-297 204-297 (370)
153 3usb_A Inosine-5'-monophosphat 89.8 0.14 4.6E-06 52.1 2.5 73 200-272 308-392 (511)
154 4ef8_A Dihydroorotate dehydrog 89.7 1.2 4.1E-05 43.4 9.0 116 200-319 142-309 (354)
155 3kws_A Putative sugar isomeras 89.7 1.5 5.2E-05 39.1 9.1 117 197-315 38-195 (287)
156 3sgz_A Hydroxyacid oxidase 2; 89.6 0.91 3.1E-05 44.5 8.1 71 201-272 229-305 (352)
157 2jbm_A Nicotinate-nucleotide p 89.5 0.91 3.1E-05 43.2 7.9 69 244-318 140-226 (299)
158 3l5l_A Xenobiotic reductase A; 89.5 0.42 1.4E-05 46.2 5.6 90 198-290 247-345 (363)
159 2nzl_A Hydroxyacid oxidase 1; 89.5 0.43 1.5E-05 47.0 5.8 72 200-272 263-340 (392)
160 1gte_A Dihydropyrimidine dehyd 89.5 0.43 1.5E-05 51.9 6.3 92 198-290 716-844 (1025)
161 4gj1_A 1-(5-phosphoribosyl)-5- 89.5 0.4 1.4E-05 43.9 5.2 137 196-336 30-193 (243)
162 1qop_A Tryptophan synthase alp 89.4 1 3.5E-05 41.5 8.0 43 227-271 194-237 (268)
163 2tps_A Protein (thiamin phosph 89.3 0.63 2.1E-05 40.7 6.1 74 198-274 125-206 (227)
164 2hzg_A Mandelate racemase/muco 89.3 1.1 3.8E-05 43.4 8.4 92 199-297 211-305 (401)
165 2nql_A AGR_PAT_674P, isomerase 89.2 0.76 2.6E-05 44.3 7.2 92 199-297 224-316 (388)
166 3oix_A Putative dihydroorotate 89.2 1.2 4.2E-05 43.2 8.7 116 199-318 143-306 (345)
167 3tqv_A Nicotinate-nucleotide p 89.1 0.47 1.6E-05 45.5 5.5 67 250-320 149-229 (287)
168 1kbi_A Cytochrome B2, L-LCR; f 89.1 0.4 1.4E-05 48.9 5.3 69 200-269 354-433 (511)
169 2e6f_A Dihydroorotate dehydrog 89.0 0.44 1.5E-05 44.3 5.2 74 198-272 175-277 (314)
170 3oix_A Putative dihydroorotate 88.9 0.25 8.7E-06 48.0 3.6 77 193-270 200-306 (345)
171 3ceu_A Thiamine phosphate pyro 88.9 0.13 4.3E-06 45.7 1.4 97 200-317 16-115 (210)
172 3cu2_A Ribulose-5-phosphate 3- 88.8 0.22 7.6E-06 46.0 3.0 123 186-317 16-156 (237)
173 1yx1_A Hypothetical protein PA 88.7 0.84 2.9E-05 40.5 6.6 64 252-316 88-161 (264)
174 1vs1_A 3-deoxy-7-phosphoheptul 88.7 1.1 3.8E-05 42.3 7.8 50 274-325 88-137 (276)
175 1xi3_A Thiamine phosphate pyro 88.7 0.48 1.7E-05 40.9 4.9 74 198-274 117-196 (215)
176 1tqx_A D-ribulose-5-phosphate 88.5 0.38 1.3E-05 44.1 4.3 128 187-320 9-149 (227)
177 1tkk_A Similar to chloromucona 88.5 2.2 7.4E-05 40.6 9.7 91 199-294 201-295 (366)
178 2qjg_A Putative aldolase MJ040 88.5 0.76 2.6E-05 41.7 6.3 89 177-275 146-244 (273)
179 2b7n_A Probable nicotinate-nuc 88.3 1.2 4E-05 41.7 7.6 67 249-318 131-211 (273)
180 1xm3_A Thiazole biosynthesis p 88.2 0.9 3.1E-05 42.0 6.7 71 201-273 138-212 (264)
181 1p4c_A L(+)-mandelate dehydrog 88.2 0.53 1.8E-05 45.9 5.4 72 200-272 236-311 (380)
182 1gte_A Dihydropyrimidine dehyd 88.2 1.2 4.1E-05 48.5 8.6 116 200-317 651-817 (1025)
183 3dg3_A Muconate cycloisomerase 88.0 1.2 4.1E-05 42.7 7.7 89 200-294 202-292 (367)
184 1p0k_A Isopentenyl-diphosphate 88.0 0.71 2.4E-05 43.9 6.0 75 197-272 190-284 (349)
185 1jcn_A Inosine monophosphate d 87.9 0.12 4E-06 52.0 0.5 74 200-274 307-393 (514)
186 4fo4_A Inosine 5'-monophosphat 87.9 0.68 2.3E-05 45.3 6.0 74 201-274 161-246 (366)
187 3bo9_A Putative nitroalkan dio 87.9 2.5 8.5E-05 40.0 9.7 120 198-327 90-216 (326)
188 2qde_A Mandelate racemase/muco 87.8 1.8 6.2E-05 41.8 8.9 91 199-294 205-297 (397)
189 2pp0_A L-talarate/galactarate 87.8 1.7 5.7E-05 42.2 8.6 97 199-302 236-334 (398)
190 3o07_A Pyridoxine biosynthesis 87.8 1.4 4.6E-05 42.6 7.7 115 198-322 124-279 (291)
191 3c2e_A Nicotinate-nucleotide p 87.7 1.2 3.9E-05 42.4 7.2 66 249-320 148-230 (294)
192 2p8b_A Mandelate racemase/muco 87.7 1.4 4.8E-05 41.9 7.9 92 198-294 200-294 (369)
193 1vr6_A Phospho-2-dehydro-3-deo 87.6 1.3 4.4E-05 43.4 7.7 50 274-325 156-205 (350)
194 2ox4_A Putative mandelate race 87.6 1 3.6E-05 43.4 7.0 93 199-298 225-319 (403)
195 1sjd_A N-acylamino acid racema 87.4 2 6.7E-05 40.9 8.7 92 200-296 199-292 (368)
196 2ps2_A Putative mandelate race 87.3 1.8 6.1E-05 41.3 8.4 89 200-296 207-298 (371)
197 1ujp_A Tryptophan synthase alp 87.2 0.51 1.7E-05 44.2 4.4 120 175-306 14-165 (271)
198 3vnd_A TSA, tryptophan synthas 87.1 1.1 3.7E-05 42.1 6.6 39 227-267 195-234 (267)
199 3bw2_A 2-nitropropane dioxygen 87.0 0.59 2E-05 44.8 4.8 72 202-274 157-243 (369)
200 4avf_A Inosine-5'-monophosphat 86.9 0.23 7.9E-06 50.1 2.0 74 200-273 281-366 (490)
201 3ks6_A Glycerophosphoryl diest 86.9 10 0.00035 34.2 12.8 137 161-316 86-232 (250)
202 3my9_A Muconate cycloisomerase 86.7 2.4 8.4E-05 40.7 9.0 117 163-293 180-298 (377)
203 4fxs_A Inosine-5'-monophosphat 86.6 0.21 7.1E-06 50.5 1.5 74 200-273 283-368 (496)
204 3cny_A Inositol catabolism pro 86.6 2.7 9.2E-05 37.4 8.6 64 252-315 94-187 (301)
205 2z6i_A Trans-2-enoyl-ACP reduc 86.4 3.8 0.00013 38.7 10.0 109 198-319 25-140 (332)
206 2czd_A Orotidine 5'-phosphate 86.3 3.3 0.00011 36.3 9.0 134 162-320 41-188 (208)
207 3i4k_A Muconate lactonizing en 86.3 2.1 7.2E-05 41.3 8.3 115 163-294 183-302 (383)
208 1z41_A YQJM, probable NADH-dep 86.1 2.7 9.4E-05 39.9 8.9 132 200-336 147-323 (338)
209 3nav_A Tryptophan synthase alp 86.0 0.78 2.7E-05 43.2 5.0 39 227-267 197-236 (271)
210 3ozy_A Putative mandelate race 86.0 2.1 7.3E-05 41.4 8.2 93 199-298 211-306 (389)
211 1tzz_A Hypothetical protein L1 86.0 1.6 5.4E-05 42.2 7.3 102 199-307 226-338 (392)
212 1i60_A IOLI protein; beta barr 85.9 2.7 9.3E-05 36.7 8.2 106 197-315 46-171 (278)
213 1eep_A Inosine 5'-monophosphat 85.9 1.1 3.7E-05 43.6 6.1 63 252-315 156-221 (404)
214 3gr7_A NADPH dehydrogenase; fl 85.8 3.1 0.00011 39.9 9.2 128 203-336 150-323 (340)
215 2poz_A Putative dehydratase; o 85.8 1.5 5.2E-05 42.2 7.0 93 199-298 215-309 (392)
216 4dwd_A Mandelate racemase/muco 85.7 2 6.9E-05 41.9 7.9 93 199-298 207-300 (393)
217 1r0m_A N-acylamino acid racema 85.7 1.7 5.9E-05 41.5 7.3 118 162-295 178-297 (375)
218 1vcf_A Isopentenyl-diphosphate 85.7 0.85 2.9E-05 43.2 5.1 74 197-272 193-289 (332)
219 3jva_A Dipeptide epimerase; en 85.5 2.7 9.3E-05 40.0 8.6 117 163-296 172-293 (354)
220 3gnn_A Nicotinate-nucleotide p 85.5 1.2 4.2E-05 42.8 6.1 68 250-321 160-241 (298)
221 1vd6_A Glycerophosphoryl diest 85.5 12 0.00041 33.0 12.3 130 162-316 81-214 (224)
222 1vyr_A Pentaerythritol tetrani 85.4 0.8 2.7E-05 44.4 4.9 77 199-277 253-332 (364)
223 4djd_D C/Fe-SP, corrinoid/iron 85.2 2.5 8.5E-05 41.0 8.2 161 175-339 52-236 (323)
224 2zds_A Putative DNA-binding pr 85.1 4.9 0.00017 36.4 9.8 63 253-315 116-207 (340)
225 2gl5_A Putative dehydratase pr 85.1 1.6 5.5E-05 42.2 6.9 93 199-298 234-328 (410)
226 2oz8_A MLL7089 protein; struct 85.1 3.3 0.00011 39.9 9.0 87 199-294 206-296 (389)
227 2zad_A Muconate cycloisomerase 84.9 2.8 9.6E-05 39.5 8.3 90 199-294 198-291 (345)
228 1z41_A YQJM, probable NADH-dep 84.7 0.82 2.8E-05 43.5 4.5 88 198-288 230-325 (338)
229 2qdd_A Mandelate racemase/muco 84.7 3.8 0.00013 39.2 9.2 68 226-294 225-294 (378)
230 3stp_A Galactonate dehydratase 84.5 2.4 8.1E-05 41.7 7.9 100 200-304 247-348 (412)
231 2z6i_A Trans-2-enoyl-ACP reduc 84.4 0.72 2.5E-05 43.7 4.0 96 160-275 99-198 (332)
232 2pz0_A Glycerophosphoryl diest 84.3 3.7 0.00013 37.0 8.5 136 161-316 100-239 (252)
233 3ngf_A AP endonuclease, family 84.0 5.4 0.00019 35.3 9.4 62 253-315 98-182 (269)
234 3i6e_A Muconate cycloisomerase 84.0 4.4 0.00015 39.2 9.4 116 163-293 182-299 (385)
235 1vhn_A Putative flavin oxidore 84.0 0.87 3E-05 42.8 4.3 77 198-277 141-222 (318)
236 1wa3_A 2-keto-3-deoxy-6-phosph 83.9 2.2 7.4E-05 36.9 6.5 105 198-317 72-179 (205)
237 3qc0_A Sugar isomerase; TIM ba 83.7 2.5 8.4E-05 37.0 6.9 62 253-315 88-174 (275)
238 2r8c_A Putative amidohydrolase 83.6 2.4 8.1E-05 39.9 7.2 73 255-334 182-267 (426)
239 1o4u_A Type II quinolic acid p 83.6 2 6.8E-05 40.9 6.6 41 277-318 179-222 (285)
240 3l0g_A Nicotinate-nucleotide p 83.6 1.6 5.6E-05 42.1 6.0 68 249-320 157-238 (300)
241 3r2g_A Inosine 5'-monophosphat 83.5 5.6 0.00019 39.0 9.9 108 201-316 57-169 (361)
242 2gjl_A Hypothetical protein PA 83.4 1.7 5.8E-05 40.8 6.1 74 201-276 129-209 (328)
243 3mqt_A Mandelate racemase/muco 83.3 2 6.7E-05 41.8 6.6 93 199-298 217-311 (394)
244 2qq6_A Mandelate racemase/muco 83.1 2.7 9.3E-05 40.7 7.5 93 199-298 226-320 (410)
245 3ajx_A 3-hexulose-6-phosphate 83.0 0.52 1.8E-05 40.8 2.2 77 198-277 115-195 (207)
246 4e5t_A Mandelate racemase / mu 82.9 3.2 0.00011 40.5 8.0 93 199-298 224-318 (404)
247 2v82_A 2-dehydro-3-deoxy-6-pho 82.7 3.1 0.00011 36.1 7.1 100 202-317 72-177 (212)
248 3bjs_A Mandelate racemase/muco 82.6 2 6.7E-05 42.3 6.4 91 199-294 245-338 (428)
249 1chr_A Chloromuconate cycloiso 82.6 3.6 0.00012 39.3 8.1 117 163-293 177-295 (370)
250 1yad_A Regulatory protein TENI 82.3 2.7 9.2E-05 36.9 6.6 86 198-286 119-214 (221)
251 2zc8_A N-acylamino acid racema 82.3 3.7 0.00013 39.0 8.0 119 163-297 172-292 (369)
252 2o56_A Putative mandelate race 82.3 1.7 6E-05 41.9 5.8 93 199-298 231-325 (407)
253 3mwc_A Mandelate racemase/muco 82.3 5.3 0.00018 39.0 9.2 116 163-293 194-311 (400)
254 2h9a_B CO dehydrogenase/acetyl 82.2 1.9 6.6E-05 41.4 6.0 126 175-304 45-190 (310)
255 1nvm_A HOA, 4-hydroxy-2-oxoval 82.2 5.8 0.0002 37.9 9.3 136 198-338 31-188 (345)
256 2c6q_A GMP reductase 2; TIM ba 82.2 2 7E-05 41.4 6.2 72 201-272 173-256 (351)
257 3b0p_A TRNA-dihydrouridine syn 82.1 7.5 0.00026 37.2 10.1 114 200-316 73-225 (350)
258 3mkc_A Racemase; metabolic pro 81.9 2.9 0.0001 40.6 7.2 93 199-298 222-316 (394)
259 3sbf_A Mandelate racemase / mu 81.8 3.2 0.00011 40.3 7.5 93 199-298 217-311 (401)
260 3eez_A Putative mandelate race 81.8 3.6 0.00012 39.6 7.8 90 199-296 205-296 (378)
261 1tv5_A Dhodehase, dihydroorota 81.6 5.2 0.00018 40.1 9.1 80 238-318 295-404 (443)
262 3gd6_A Muconate cycloisomerase 81.5 4.8 0.00016 39.0 8.6 89 199-294 203-295 (391)
263 2gdq_A YITF; mandelate racemas 81.3 2.3 7.8E-05 41.0 6.2 89 201-294 202-293 (382)
264 3ro6_B Putative chloromuconate 81.2 1.5 5.2E-05 41.9 4.9 116 163-295 173-294 (356)
265 3p3b_A Mandelate racemase/muco 80.8 3.8 0.00013 39.6 7.6 87 200-293 218-310 (392)
266 3rcy_A Mandelate racemase/muco 80.7 4.6 0.00016 39.9 8.3 92 199-297 219-312 (433)
267 4e4u_A Mandalate racemase/muco 80.6 4.8 0.00016 39.4 8.3 93 199-298 217-311 (412)
268 1ydn_A Hydroxymethylglutaryl-C 80.5 3.3 0.00011 38.4 6.8 131 199-338 28-194 (295)
269 1k77_A EC1530, hypothetical pr 80.4 3.1 0.00011 36.2 6.3 112 196-315 39-175 (260)
270 1mzh_A Deoxyribose-phosphate a 80.4 2.7 9.2E-05 37.9 6.0 112 203-317 76-205 (225)
271 3ugv_A Enolase; enzyme functio 80.2 4.7 0.00016 39.2 8.0 125 163-306 208-337 (390)
272 3dgb_A Muconate cycloisomerase 80.2 5.9 0.0002 38.2 8.7 90 199-293 210-301 (382)
273 3d0c_A Dihydrodipicolinate syn 80.1 2.8 9.6E-05 39.7 6.3 59 175-244 80-142 (314)
274 3vk5_A MOEO5; TIM barrel, tran 80.0 1.3 4.4E-05 42.6 3.9 75 198-274 182-262 (286)
275 3r4e_A Mandelate racemase/muco 79.9 2.2 7.4E-05 41.9 5.6 93 199-298 236-330 (418)
276 1qwg_A PSL synthase;, (2R)-pho 79.8 4.1 0.00014 38.4 7.2 97 200-318 58-170 (251)
277 3ddm_A Putative mandelate race 79.7 3.7 0.00013 39.9 7.2 93 199-298 215-310 (392)
278 1x1o_A Nicotinate-nucleotide p 79.6 3.6 0.00012 39.1 6.8 38 280-318 185-225 (286)
279 3cpr_A Dihydrodipicolinate syn 79.6 3.3 0.00011 39.0 6.5 62 175-246 84-149 (304)
280 3r0u_A Enzyme of enolase super 79.4 9 0.00031 37.1 9.7 93 199-294 202-296 (379)
281 3glc_A Aldolase LSRF; TIM barr 79.3 1.7 5.9E-05 41.4 4.6 64 252-316 129-209 (295)
282 3cqj_A L-ribulose-5-phosphate 79.3 13 0.00043 33.2 10.1 64 252-315 112-193 (295)
283 3qvq_A Phosphodiesterase OLEI0 79.3 6.2 0.00021 35.6 8.1 86 225-317 151-239 (252)
284 3l5l_A Xenobiotic reductase A; 79.3 8.8 0.0003 36.9 9.5 113 203-316 164-325 (363)
285 3feq_A Putative amidohydrolase 79.1 2.5 8.4E-05 39.3 5.4 74 254-334 178-264 (423)
286 3fcp_A L-Ala-D/L-Glu epimerase 79.0 7 0.00024 37.6 8.8 90 199-293 209-300 (381)
287 3v3w_A Starvation sensing prot 78.7 2.6 9E-05 41.5 5.8 93 199-298 242-336 (424)
288 2ftp_A Hydroxymethylglutaryl-C 78.5 11 0.00038 35.2 9.8 131 198-339 31-199 (302)
289 3dip_A Enolase; structural gen 78.5 6.2 0.00021 38.5 8.4 114 163-293 202-321 (410)
290 3tj4_A Mandelate racemase; eno 78.5 4.8 0.00017 38.6 7.4 116 163-297 186-306 (372)
291 1qap_A Quinolinic acid phospho 78.2 8.5 0.00029 36.6 8.9 70 244-317 152-236 (296)
292 3nl6_A Thiamine biosynthetic b 78.1 4.9 0.00017 41.2 7.8 108 196-316 24-138 (540)
293 2gou_A Oxidoreductase, FMN-bin 78.1 1.9 6.6E-05 41.7 4.5 75 199-277 252-331 (365)
294 3go2_A Putative L-alanine-DL-g 78.0 7 0.00024 38.1 8.5 115 163-298 202-320 (409)
295 3toy_A Mandelate racemase/muco 77.8 4.3 0.00015 39.3 6.9 100 200-306 230-331 (383)
296 3fs2_A 2-dehydro-3-deoxyphosph 77.4 3.3 0.00011 39.8 5.9 50 274-325 98-147 (298)
297 3rr1_A GALD, putative D-galact 77.2 4 0.00014 40.0 6.5 92 199-297 194-287 (405)
298 1w8s_A FBP aldolase, fructose- 77.1 16 0.00053 33.7 10.2 123 195-335 39-192 (263)
299 3kw3_A Alanine racemase; niaid 77.1 11 0.00038 36.6 9.6 105 198-316 58-177 (376)
300 3q45_A Mandelate racemase/muco 76.9 4.3 0.00015 39.0 6.5 91 200-295 201-293 (368)
301 4ab4_A Xenobiotic reductase B; 76.9 2.6 8.8E-05 41.1 5.0 74 198-277 243-317 (362)
302 2akz_A Gamma enolase, neural; 76.8 7.7 0.00026 38.7 8.6 107 196-307 269-389 (439)
303 3obe_A Sugar phosphate isomera 76.5 16 0.00054 33.4 10.0 81 198-298 77-173 (305)
304 3l0g_A Nicotinate-nucleotide p 76.4 2.8 9.7E-05 40.4 5.1 135 159-317 132-280 (300)
305 1me8_A Inosine-5'-monophosphat 76.3 2.7 9.2E-05 42.2 5.2 72 201-272 296-385 (503)
306 1xky_A Dihydrodipicolinate syn 76.3 3.9 0.00013 38.5 5.9 62 175-246 80-145 (301)
307 3sz8_A 2-dehydro-3-deoxyphosph 76.2 2.8 9.7E-05 40.0 5.0 50 274-325 77-126 (285)
308 3paj_A Nicotinate-nucleotide p 76.1 4.6 0.00016 39.2 6.5 135 159-317 156-304 (320)
309 3t6c_A RSPA, putative MAND fam 75.9 5 0.00017 39.8 6.9 93 199-298 256-350 (440)
310 3flu_A DHDPS, dihydrodipicolin 75.8 3.8 0.00013 38.4 5.8 62 175-246 75-140 (297)
311 3gk0_A PNP synthase, pyridoxin 75.8 26 0.0009 33.5 11.5 115 197-315 53-182 (278)
312 1o1z_A GDPD, glycerophosphodie 75.7 17 0.00058 32.4 9.8 128 161-316 91-225 (234)
313 2r8w_A AGR_C_1641P; APC7498, d 75.7 4.3 0.00015 38.9 6.1 62 175-246 102-167 (332)
314 3sjn_A Mandelate racemase/muco 75.4 3.6 0.00012 39.6 5.6 93 199-298 210-304 (374)
315 1qpo_A Quinolinate acid phosph 75.4 6.2 0.00021 37.4 7.1 39 279-318 183-223 (284)
316 3tva_A Xylose isomerase domain 75.3 4.4 0.00015 36.1 5.8 115 199-315 53-181 (290)
317 3o63_A Probable thiamine-phosp 75.3 4.2 0.00014 37.4 5.8 78 197-276 143-227 (243)
318 1muw_A Xylose isomerase; atomi 75.2 14 0.00049 35.0 9.7 119 198-316 34-214 (386)
319 2yxg_A DHDPS, dihydrodipicolin 75.2 3.5 0.00012 38.4 5.4 62 175-246 68-133 (289)
320 2r14_A Morphinone reductase; H 74.9 1.8 6.3E-05 42.2 3.4 77 199-277 257-337 (377)
321 3vcn_A Mannonate dehydratase; 74.7 3.2 0.00011 40.9 5.1 120 163-298 216-337 (425)
322 3u0h_A Xylose isomerase domain 74.7 9.1 0.00031 33.5 7.6 64 253-316 89-177 (281)
323 2r91_A 2-keto-3-deoxy-(6-phosp 74.7 3.9 0.00013 38.0 5.5 44 198-243 78-126 (286)
324 2ekc_A AQ_1548, tryptophan syn 74.6 1.9 6.4E-05 39.7 3.2 42 228-272 196-238 (262)
325 3gka_A N-ethylmaleimide reduct 74.4 3.2 0.00011 40.4 5.0 73 199-277 252-325 (361)
326 3tml_A 2-dehydro-3-deoxyphosph 74.4 2.8 9.4E-05 40.1 4.4 50 274-325 74-123 (288)
327 1w8s_A FBP aldolase, fructose- 74.3 16 0.00053 33.7 9.4 98 178-284 140-247 (263)
328 2ehh_A DHDPS, dihydrodipicolin 74.0 4.5 0.00016 37.8 5.8 62 175-246 68-133 (294)
329 2nuw_A 2-keto-3-deoxygluconate 74.0 4 0.00014 38.1 5.4 45 198-244 79-128 (288)
330 3tsm_A IGPS, indole-3-glycerol 74.0 3.9 0.00013 38.5 5.3 87 177-278 170-259 (272)
331 2rfg_A Dihydrodipicolinate syn 73.9 3.7 0.00013 38.5 5.1 59 175-243 68-130 (297)
332 3fkr_A L-2-keto-3-deoxyarabona 73.9 3.9 0.00013 38.7 5.3 71 175-255 76-158 (309)
333 3tqv_A Nicotinate-nucleotide p 73.9 5.2 0.00018 38.2 6.2 134 158-315 122-269 (287)
334 3qze_A DHDPS, dihydrodipicolin 73.9 4.4 0.00015 38.4 5.7 62 175-246 91-156 (314)
335 2ojp_A DHDPS, dihydrodipicolin 73.8 3.4 0.00012 38.6 4.8 60 175-244 69-132 (292)
336 1xla_A D-xylose isomerase; iso 73.6 20 0.00067 34.3 10.2 119 198-316 34-214 (394)
337 3tji_A Mandelate racemase/muco 73.6 4.4 0.00015 39.9 5.8 93 199-298 238-332 (422)
338 2oog_A Glycerophosphoryl diest 73.5 44 0.0015 30.5 12.2 133 161-316 121-269 (287)
339 3zwt_A Dihydroorotate dehydrog 73.5 7.7 0.00026 37.7 7.4 120 198-318 162-329 (367)
340 3l21_A DHDPS, dihydrodipicolin 73.4 4.2 0.00014 38.3 5.4 62 175-246 83-148 (304)
341 1h1y_A D-ribulose-5-phosphate 73.4 2.2 7.6E-05 38.0 3.3 74 201-276 127-209 (228)
342 2yw3_A 4-hydroxy-2-oxoglutarat 73.2 4.5 0.00015 36.0 5.3 84 198-286 113-196 (207)
343 1f6k_A N-acetylneuraminate lya 73.2 3.4 0.00012 38.6 4.6 62 175-246 72-137 (293)
344 3sr7_A Isopentenyl-diphosphate 73.0 4.3 0.00015 39.7 5.5 72 201-272 221-311 (365)
345 1q6o_A Humps, 3-keto-L-gulonat 72.9 6.2 0.00021 34.7 6.1 108 198-307 14-128 (216)
346 3gnh_A L-lysine, L-arginine ca 72.8 8.1 0.00028 35.5 7.1 72 257-335 176-260 (403)
347 1o5k_A DHDPS, dihydrodipicolin 72.6 4.5 0.00015 38.1 5.4 62 175-246 80-145 (306)
348 3tcs_A Racemase, putative; PSI 72.6 15 0.00053 35.6 9.4 116 163-297 188-308 (388)
349 2hk0_A D-psicose 3-epimerase; 72.6 19 0.00065 32.4 9.4 63 253-315 112-200 (309)
350 2vc6_A MOSA, dihydrodipicolina 72.5 5.1 0.00017 37.4 5.7 61 175-245 68-132 (292)
351 2g0w_A LMO2234 protein; putati 72.5 14 0.00048 33.2 8.5 117 197-315 36-181 (296)
352 2nwr_A 2-dehydro-3-deoxyphosph 72.5 3.7 0.00013 38.6 4.8 49 274-324 61-109 (267)
353 3si9_A DHDPS, dihydrodipicolin 72.4 5 0.00017 38.1 5.7 62 175-246 90-155 (315)
354 3ctl_A D-allulose-6-phosphate 72.3 1.9 6.5E-05 39.4 2.7 138 162-320 47-199 (231)
355 3l23_A Sugar phosphate isomera 72.3 7.9 0.00027 35.3 6.9 82 197-297 59-168 (303)
356 3eb2_A Putative dihydrodipicol 72.2 5.7 0.00019 37.3 6.0 62 175-246 72-137 (300)
357 3kts_A Glycerol uptake operon 72.1 1.9 6.3E-05 39.1 2.5 58 203-266 120-177 (192)
358 3vni_A Xylose isomerase domain 72.1 20 0.00067 31.7 9.3 117 198-315 18-181 (294)
359 3m5v_A DHDPS, dihydrodipicolin 71.9 5.3 0.00018 37.5 5.7 60 176-245 77-140 (301)
360 1w3i_A EDA, 2-keto-3-deoxy glu 71.7 4.7 0.00016 37.7 5.2 45 198-244 79-128 (293)
361 3ngj_A Deoxyribose-phosphate a 71.7 9.7 0.00033 35.4 7.3 111 204-317 102-230 (239)
362 2v9d_A YAGE; dihydrodipicolini 71.5 5 0.00017 38.6 5.5 61 175-245 99-163 (343)
363 3ch0_A Glycerophosphodiester p 71.5 13 0.00046 33.4 8.1 127 176-316 130-264 (272)
364 2wkj_A N-acetylneuraminate lya 71.3 3.9 0.00013 38.5 4.6 62 175-246 79-145 (303)
365 1wuf_A Hypothetical protein LI 71.3 8 0.00027 37.3 7.0 115 163-293 192-308 (393)
366 2fym_A Enolase; RNA degradosom 71.1 13 0.00044 36.6 8.5 93 197-294 267-368 (431)
367 1wue_A Mandelate racemase/muco 71.1 9.3 0.00032 36.7 7.3 115 163-293 192-308 (386)
368 2yci_X 5-methyltetrahydrofolat 70.8 11 0.00038 35.2 7.6 116 175-297 8-133 (271)
369 4e4f_A Mannonate dehydratase; 70.8 4.4 0.00015 39.9 5.1 116 163-297 217-337 (426)
370 3s83_A Ggdef family protein; s 70.7 11 0.00037 33.5 7.2 109 178-313 124-234 (259)
371 2hxt_A L-fuconate dehydratase; 70.7 6 0.0002 38.8 6.0 91 200-297 259-352 (441)
372 3s5o_A 4-hydroxy-2-oxoglutarat 70.5 3.2 0.00011 39.1 3.9 62 175-246 82-149 (307)
373 1geq_A Tryptophan synthase alp 70.4 4.2 0.00014 36.1 4.4 74 198-274 144-226 (248)
374 4a3q_A Alanine racemase 1; iso 70.4 20 0.0007 34.8 9.6 106 198-317 46-167 (382)
375 3tak_A DHDPS, dihydrodipicolin 70.3 5.5 0.00019 37.1 5.4 62 175-246 69-134 (291)
376 1o60_A 2-dehydro-3-deoxyphosph 70.3 4.4 0.00015 38.5 4.7 50 274-325 75-124 (292)
377 2ptz_A Enolase; lyase, glycoly 70.3 24 0.00083 34.8 10.3 125 164-294 229-373 (432)
378 2al1_A Enolase 1, 2-phospho-D- 70.2 13 0.00046 36.9 8.4 93 197-294 273-372 (436)
379 2p3z_A L-rhamnonate dehydratas 70.1 8.4 0.00029 37.9 6.9 96 196-298 232-333 (415)
380 2qgh_A Diaminopimelate decarbo 69.8 35 0.0012 32.9 11.2 84 201-297 72-158 (425)
381 2qr6_A IMP dehydrogenase/GMP r 69.8 4.7 0.00016 38.9 4.9 76 198-274 221-312 (393)
382 3vkj_A Isopentenyl-diphosphate 69.4 7.7 0.00026 37.8 6.4 71 201-272 202-300 (368)
383 3gnn_A Nicotinate-nucleotide p 69.3 8.1 0.00028 37.1 6.4 135 159-317 134-282 (298)
384 3qn3_A Enolase; structural gen 69.2 14 0.00048 36.7 8.3 94 197-295 261-363 (417)
385 1xfc_A Alanine racemase; alpha 69.2 22 0.00077 33.7 9.5 104 199-316 50-170 (384)
386 2agk_A 1-(5-phosphoribosyl)-5- 68.9 3 0.0001 38.5 3.2 87 196-285 156-257 (260)
387 3aty_A Tcoye, prostaglandin F2 68.8 10 0.00034 37.0 7.1 74 199-277 268-345 (379)
388 4dxk_A Mandelate racemase / mu 68.6 7.5 0.00026 37.8 6.1 90 199-293 226-317 (400)
389 3hgj_A Chromate reductase; TIM 68.6 21 0.0007 34.1 9.1 128 203-336 158-334 (349)
390 2f6u_A GGGPS, (S)-3-O-geranylg 68.5 7.2 0.00025 36.0 5.7 71 197-272 146-222 (234)
391 1m5w_A Pyridoxal phosphate bio 68.5 49 0.0017 31.1 11.3 117 197-316 25-155 (243)
392 1twd_A Copper homeostasis prot 68.4 10 0.00035 35.8 6.7 107 202-313 13-145 (256)
393 3daq_A DHDPS, dihydrodipicolin 68.4 5 0.00017 37.5 4.7 61 175-245 70-134 (292)
394 2qkf_A 3-deoxy-D-manno-octulos 68.3 4.1 0.00014 38.4 4.0 49 274-324 72-120 (280)
395 4dye_A Isomerase; enolase fami 68.0 13 0.00044 36.2 7.7 89 199-294 228-318 (398)
396 3tlq_A Regulatory protein YDIV 67.8 4.2 0.00014 36.3 3.9 107 178-312 114-222 (242)
397 3na8_A Putative dihydrodipicol 67.6 7 0.00024 37.0 5.6 62 175-246 92-157 (315)
398 3kru_A NADH:flavin oxidoreduct 67.6 8.2 0.00028 37.2 6.1 78 198-277 231-316 (343)
399 2qul_A D-tagatose 3-epimerase; 67.6 9.3 0.00032 33.6 6.1 64 252-315 92-182 (290)
400 3inp_A D-ribulose-phosphate 3- 67.2 3 0.0001 38.7 2.9 112 198-315 97-222 (246)
401 1vyr_A Pentaerythritol tetrani 67.0 22 0.00074 34.3 9.0 115 200-316 164-323 (364)
402 3kru_A NADH:flavin oxidoreduct 67.0 21 0.0007 34.4 8.8 113 203-316 149-307 (343)
403 3fv9_G Mandelate racemase/muco 67.0 35 0.0012 32.9 10.5 69 226-295 231-301 (386)
404 2hsa_B 12-oxophytodienoate red 66.8 6 0.00021 38.9 5.1 77 199-277 262-357 (402)
405 3co8_A Alanine racemase; prote 66.7 34 0.0012 32.5 10.2 103 199-316 48-165 (380)
406 3qfe_A Putative dihydrodipicol 66.6 6 0.00021 37.6 4.9 62 175-246 79-146 (318)
407 1twi_A Diaminopimelate decarbo 66.6 34 0.0012 32.9 10.3 83 201-296 75-160 (434)
408 2otd_A Glycerophosphodiester p 66.5 20 0.00068 31.9 8.1 85 226-317 149-236 (247)
409 3b4u_A Dihydrodipicolinate syn 66.3 6.3 0.00021 36.8 4.9 72 175-256 71-156 (294)
410 3a5f_A Dihydrodipicolinate syn 66.2 5.2 0.00018 37.3 4.3 60 175-244 69-132 (291)
411 2yzr_A Pyridoxal biosynthesis 66.0 4 0.00014 39.9 3.5 88 225-321 227-320 (330)
412 2hmc_A AGR_L_411P, dihydrodipi 65.9 7.3 0.00025 37.6 5.4 62 175-246 91-158 (344)
413 1ps9_A 2,4-dienoyl-COA reducta 65.6 4.7 0.00016 41.3 4.2 79 198-277 229-319 (671)
414 1vfs_A Alanine racemase; TIM-b 65.5 37 0.0013 32.3 10.2 105 198-316 45-166 (386)
415 4e8g_A Enolase, mandelate race 65.4 42 0.0014 32.5 10.7 93 195-295 219-316 (391)
416 1ub3_A Aldolase protein; schif 65.0 14 0.00047 33.6 6.8 112 204-316 78-205 (220)
417 3v7q_A Probable ribosomal prot 64.6 35 0.0012 26.9 8.4 81 227-316 8-88 (101)
418 4hjf_A Ggdef family protein; s 64.6 7 0.00024 37.1 4.9 109 178-313 197-307 (340)
419 1tqj_A Ribulose-phosphate 3-ep 64.1 1.2 4.1E-05 40.2 -0.5 73 204-279 129-212 (230)
420 3noy_A 4-hydroxy-3-methylbut-2 64.1 17 0.00058 36.0 7.6 91 199-294 48-139 (366)
421 4af0_A Inosine-5'-monophosphat 64.0 25 0.00086 36.6 9.2 118 198-317 281-414 (556)
422 1bd0_A Alanine racemase; isome 64.0 23 0.0008 33.9 8.5 103 199-316 47-164 (388)
423 2cw6_A Hydroxymethylglutaryl-C 63.9 18 0.00062 33.6 7.5 131 198-338 28-195 (298)
424 2yxx_A Diaminopimelate decarbo 63.7 41 0.0014 31.8 10.1 81 201-295 52-133 (386)
425 4af0_A Inosine-5'-monophosphat 63.5 3 0.0001 43.4 2.3 85 182-267 315-412 (556)
426 3paj_A Nicotinate-nucleotide p 63.4 6.2 0.00021 38.3 4.4 74 244-320 175-262 (320)
427 2bas_A YKUI protein; EAL domai 63.3 7.6 0.00026 37.9 5.0 109 178-312 142-251 (431)
428 1rpx_A Protein (ribulose-phosp 63.3 4.6 0.00016 35.6 3.2 74 203-279 134-218 (230)
429 3e5p_A Alanine racemase; ALR, 63.3 18 0.00061 35.0 7.6 105 198-316 47-167 (371)
430 4f3h_A Fimxeal, putative uncha 62.5 7.2 0.00025 34.5 4.3 108 178-312 128-237 (250)
431 3tha_A Tryptophan synthase alp 62.1 5.2 0.00018 37.4 3.4 56 227-285 188-247 (252)
432 2pa6_A Enolase; glycolysis, ly 62.0 17 0.00059 35.5 7.3 84 205-293 279-365 (427)
433 1zfj_A Inosine monophosphate d 61.8 12 0.0004 37.0 6.1 72 201-272 286-369 (491)
434 3ayv_A Putative uncharacterize 61.4 8.7 0.0003 33.5 4.6 54 253-306 81-151 (254)
435 1w6t_A Enolase; bacterial infe 61.2 16 0.00055 36.1 7.0 92 197-293 279-379 (444)
436 2nx9_A Oxaloacetate decarboxyl 60.8 21 0.0007 36.0 7.8 136 198-338 31-197 (464)
437 2b7n_A Probable nicotinate-nuc 60.8 9.4 0.00032 35.6 5.0 138 159-317 106-258 (273)
438 3oa3_A Aldolase; structural ge 60.7 36 0.0012 32.5 9.0 111 204-317 133-264 (288)
439 4d9a_A 2-pyrone-4,6-dicarbaxyl 60.6 20 0.00067 33.2 7.1 120 191-313 48-177 (303)
440 1icp_A OPR1, 12-oxophytodienoa 60.6 6.8 0.00023 38.1 4.1 76 199-277 258-339 (376)
441 2j66_A BTRK, decarboxylase; bu 60.2 96 0.0033 29.7 12.1 85 200-297 54-141 (428)
442 3qld_A Mandelate racemase/muco 60.1 25 0.00084 34.0 8.0 86 203-293 209-296 (388)
443 2o0t_A Diaminopimelate decarbo 59.9 98 0.0034 30.3 12.4 85 200-297 79-166 (467)
444 3e96_A Dihydrodipicolinate syn 59.7 8.5 0.00029 36.4 4.5 61 175-246 80-144 (316)
445 1viz_A PCRB protein homolog; s 59.6 10 0.00036 35.0 5.0 72 198-273 140-215 (240)
446 3ble_A Citramalate synthase fr 59.6 21 0.00072 34.0 7.3 127 198-337 42-207 (337)
447 1bxb_A Xylose isomerase; xylos 59.4 30 0.001 32.8 8.4 121 195-316 31-214 (387)
448 3glc_A Aldolase LSRF; TIM barr 59.4 11 0.00039 35.8 5.3 95 177-285 172-274 (295)
449 3iv3_A Tagatose 1,6-diphosphat 59.1 5.4 0.00019 38.8 3.1 46 250-295 112-167 (332)
450 3nvt_A 3-deoxy-D-arabino-heptu 59.1 16 0.00053 36.1 6.4 129 199-334 158-307 (385)
451 1vhn_A Putative flavin oxidore 58.9 5.2 0.00018 37.5 2.9 88 228-318 116-215 (318)
452 2vd8_A Alanine racemase; pyrid 58.9 38 0.0013 32.3 9.0 104 198-316 50-168 (391)
453 3jr2_A Hexulose-6-phosphate sy 58.5 1.4 4.7E-05 39.1 -1.1 79 198-278 121-204 (218)
454 1o94_A Tmadh, trimethylamine d 58.4 21 0.00071 37.1 7.5 78 198-277 239-330 (729)
455 3n2b_A Diaminopimelate decarbo 58.2 1.2E+02 0.004 29.7 12.5 84 200-296 90-176 (441)
456 4hnl_A Mandelate racemase/muco 58.1 14 0.00048 36.0 5.8 92 200-298 238-331 (421)
457 3qtp_A Enolase 1; glycolysis, 58.0 24 0.00082 35.7 7.6 95 197-296 279-381 (441)
458 3qz6_A HPCH/HPAI aldolase; str 57.0 15 0.00053 33.8 5.7 67 249-316 25-95 (261)
459 1xim_A D-xylose isomerase; iso 56.8 45 0.0015 31.7 9.1 120 195-315 31-213 (393)
460 3h5d_A DHDPS, dihydrodipicolin 56.8 17 0.00057 34.4 6.0 62 175-246 75-141 (311)
461 2cu0_A Inosine-5'-monophosphat 56.7 9.8 0.00034 37.8 4.6 45 227-272 317-361 (486)
462 1ps9_A 2,4-dienoyl-COA reducta 56.3 27 0.00092 35.7 7.8 116 200-316 144-310 (671)
463 2nva_A Arginine decarboxylase, 56.1 94 0.0032 29.1 11.1 82 201-297 54-136 (372)
464 3on1_A BH2414 protein; structu 55.8 30 0.001 27.2 6.5 80 228-316 8-87 (101)
465 3ik4_A Mandelate racemase/muco 55.7 26 0.0009 33.4 7.3 97 196-295 197-297 (365)
466 3l12_A Putative glycerophospho 55.5 18 0.0006 33.7 5.8 128 176-316 143-296 (313)
467 3o21_A Glutamate receptor 3; p 55.3 23 0.0008 33.0 6.7 89 199-291 118-212 (389)
468 3vab_A Diaminopimelate decarbo 55.3 1.2E+02 0.0041 29.7 12.1 84 200-296 87-173 (443)
469 2yr1_A 3-dehydroquinate dehydr 55.2 66 0.0023 29.5 9.6 111 200-315 35-175 (257)
470 3fwz_A Inner membrane protein 54.7 80 0.0027 25.2 9.8 100 201-313 21-122 (140)
471 2ztj_A Homocitrate synthase; ( 54.7 20 0.0007 34.8 6.4 132 198-337 26-182 (382)
472 2bdq_A Copper homeostasis prot 54.6 12 0.00042 34.6 4.5 104 206-314 17-151 (224)
473 3kzp_A LMO0111 protein, putati 54.4 12 0.00041 32.4 4.3 112 178-311 102-222 (235)
474 3uj2_A Enolase 1; enzyme funct 54.3 29 0.00098 34.8 7.5 94 197-295 289-391 (449)
475 3ixl_A Amdase, arylmalonate de 54.2 14 0.00047 33.6 4.8 119 199-324 55-195 (240)
476 3llv_A Exopolyphosphatase-rela 54.1 72 0.0025 25.0 8.6 100 201-313 20-120 (141)
477 1qap_A Quinolinic acid phospho 53.9 19 0.00065 34.2 5.8 133 160-316 134-280 (296)
478 3eoo_A Methylisocitrate lyase; 53.8 10 0.00036 36.2 4.0 64 199-268 173-239 (298)
479 3q94_A Fructose-bisphosphate a 53.6 32 0.0011 32.7 7.3 69 196-265 158-233 (288)
480 1viz_A PCRB protein homolog; s 53.3 3.2 0.00011 38.4 0.4 85 200-294 23-118 (240)
481 1kko_A 3-methylaspartate ammon 53.3 20 0.00069 35.0 6.1 99 197-296 249-360 (413)
482 1xg4_A Probable methylisocitra 53.2 14 0.00049 35.0 4.9 68 198-271 168-238 (295)
483 1o4u_A Type II quinolic acid p 52.7 10 0.00035 36.0 3.8 88 225-317 177-269 (285)
484 3tqp_A Enolase; energy metabol 52.5 34 0.0012 34.0 7.6 96 196-296 262-366 (428)
485 2fli_A Ribulose-phosphate 3-ep 52.4 4.3 0.00015 35.2 1.1 75 202-279 124-209 (220)
486 3v7e_A Ribosome-associated pro 52.4 30 0.001 26.4 5.8 67 248-315 13-80 (82)
487 2jbm_A Nicotinate-nucleotide p 52.3 6.2 0.00021 37.5 2.2 140 158-317 118-273 (299)
488 2r6o_A Putative diguanylate cy 52.2 11 0.00039 34.8 4.0 108 178-312 148-257 (294)
489 3be7_A Zn-dependent arginine c 52.1 23 0.00078 32.7 6.0 55 257-312 175-242 (408)
490 3pjx_A Cyclic dimeric GMP bind 52.0 17 0.00058 34.7 5.3 109 178-313 309-418 (430)
491 4ecl_A Serine racemase, vantg; 51.8 44 0.0015 32.1 8.2 103 198-316 45-158 (374)
492 3vdg_A Probable glucarate dehy 51.5 51 0.0018 32.7 8.8 80 214-299 265-346 (445)
493 3cyj_A Mandelate racemase/muco 51.1 18 0.00062 34.4 5.3 119 163-301 177-302 (372)
494 3sy8_A ROCR; TIM barrel phosph 50.6 13 0.00044 35.3 4.1 36 276-312 334-370 (400)
495 2xed_A Putative maleate isomer 50.4 19 0.00066 33.2 5.2 88 199-293 79-176 (273)
496 1qpo_A Quinolinate acid phosph 50.1 12 0.00041 35.4 3.7 140 159-317 119-270 (284)
497 3vc5_A Mandelate racemase/muco 49.9 60 0.0021 32.1 9.0 80 214-299 260-341 (441)
498 3i65_A Dihydroorotate dehydrog 49.9 60 0.002 32.4 8.9 80 239-319 268-377 (415)
499 3llx_A Predicted amino acid al 49.9 27 0.00093 33.2 6.3 104 200-317 52-171 (376)
500 4h1z_A Enolase Q92ZS5; dehydra 49.5 36 0.0012 33.1 7.2 90 200-294 249-339 (412)
No 1
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=100.00 E-value=6.3e-66 Score=487.09 Aligned_cols=199 Identities=33% Similarity=0.470 Sum_probs=176.5
Q ss_pred cccHHHHHHHHHHHHHHHHhccCCHHHHHHhhhcCCCCccHHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHH
Q 018446 123 PRNILEEIVWHKDVEVTQLKQRRPLSMLKNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEI 202 (355)
Q Consensus 123 p~~iLe~Iv~~K~~EV~~~k~~~pl~~L~~~l~~~pp~rdF~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~i 202 (355)
.+.+|++|++.+.++.... .....|.++|.+++..... +++++|||||||+|||+|.|+ +||.++
T Consensus 5 l~g~L~div~~~~~~~~~~------------~~~~~p~~~~~~~l~~~~~-~~~~~iIAEiKraSPSkg~i~--~dp~~i 69 (258)
T 4a29_A 5 LKGWLEDVVQLSLRRPSVR------------ASRQRPIISLNERILEFNK-RNITAIIAVYERKSPSGLDVE--RDPIEY 69 (258)
T ss_dssp CCHHHHHHHHHHHTCCCCC------------CCCSSCCCCHHHHHHHHHH-TTCCCEEEEECSBCTTSCBCC--CCHHHH
T ss_pred HHHHHHHHHHHHHhChHHH------------HhhcCCccCHHHHHHHHhh-CCCcEEEEEEecCCCCCCCcc--CCHHHH
Confidence 3578999987665432111 0122467899999876543 467899999999999999994 689999
Q ss_pred HHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHHHHH
Q 018446 203 ARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTK 282 (355)
Q Consensus 203 A~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~ 282 (355)
|+.|+ +||+|||||||++||+||++||..||++ +++||||||||||||||||||.+||||||||+++|++++|++|++
T Consensus 70 A~~~~-~GA~aiSVLTd~~~F~Gs~~~L~~vr~~-v~lPvLrKDFiid~yQI~eAr~~GADaILLI~a~L~~~~l~~l~~ 147 (258)
T 4a29_A 70 AKFME-RYAVGLSITTEEKYFNGSYETLRKIASS-VSIPILMSDFIVKESQIDDAYNLGADTVLLIVKILTERELESLLE 147 (258)
T ss_dssp HHHHT-TTCSEEEEECCSTTTCCCHHHHHHHHTT-CSSCEEEESCCCSHHHHHHHHHHTCSEEEEEGGGSCHHHHHHHHH
T ss_pred HHHHh-CCCeEEEEeCCCCCCCCCHHHHHHHHHh-cCCCEeeccccccHHHHHHHHHcCCCeeehHHhhcCHHHHHHHHH
Confidence 98665 7999999999999999999999999986 999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCccccChhhHHhhhccccc
Q 018446 283 ICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERG 339 (355)
Q Consensus 283 ~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~TfevDl~~t~~L~~~~~~ 339 (355)
+|++|||++||||||++|+++|+.+ |+++||||||||+||+||+++|.+|++.+|.
T Consensus 148 ~A~~lGl~~LvEVh~~~El~rAl~~-~a~iIGINNRnL~tf~vdl~~t~~L~~~ip~ 203 (258)
T 4a29_A 148 YARSYGMEPLILINDENDLDIALRI-GARFIGIMSRDFETGEINKENQRKLISMIPS 203 (258)
T ss_dssp HHHHTTCCCEEEESSHHHHHHHHHT-TCSEEEECSBCTTTCCBCHHHHHHHHTTSCT
T ss_pred HHHHHhHHHHHhcchHHHHHHHhcC-CCcEEEEeCCCccccccCHHHHHHHHhhCCC
Confidence 9999999999999999999999997 9999999999999999999999999876553
No 2
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=100.00 E-value=1.5e-64 Score=480.21 Aligned_cols=215 Identities=43% Similarity=0.654 Sum_probs=202.8
Q ss_pred CCcccHHHHHHHHHHHHHHHHhccCCHHHHHHhhhcCCCCccHHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHH
Q 018446 121 NTPRNILEEIVWHKDVEVTQLKQRRPLSMLKNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPV 200 (355)
Q Consensus 121 ~~p~~iLe~Iv~~K~~EV~~~k~~~pl~~L~~~l~~~pp~rdF~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~ 200 (355)
+-+++||++|+++|++||+++|+..|+.+|++.+...+++++|.++|++... .++++|||||||+|||||+|+++|||+
T Consensus 4 ~m~~~iL~~I~~~k~~ev~~~~~~~~~~~l~~~~~~~~~~~~f~~al~~~~~-~~~~~vIaE~KraSPSkG~i~~~~dp~ 82 (272)
T 3tsm_A 4 SMSTDILRKIEAYKREEIAAAKARLALDELKARTRDQSAPRGFLKALEAKRA-AGQFALIAEIKKASPSKGLIRPDFDPP 82 (272)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCCHHHHHHHHHH-TTCCEEEEEECSEETTTEESCSSCCHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhCCCCCCHHHHHhhccc-cCCceEEEEeccCCCCCCccCCCCCHH
Confidence 3346899999999999999999999999999999988999999999986422 367899999999999999999999999
Q ss_pred HHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHHH
Q 018446 201 EIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYM 280 (355)
Q Consensus 201 ~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L 280 (355)
++|+.|+++||+|||||||+.||+||++||..||++ +++||||||||+|+|||++|+.+|||+||||++.|++++|++|
T Consensus 83 ~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~-v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L~~~~l~~l 161 (272)
T 3tsm_A 83 ALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQA-CSLPALRKDFLFDPYQVYEARSWGADCILIIMASVDDDLAKEL 161 (272)
T ss_dssp HHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHT-SSSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTSCHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHh-cCCCEEECCccCCHHHHHHHHHcCCCEEEEcccccCHHHHHHH
Confidence 999999999999999999999999999999999996 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCccccChhhHHhhhcccc
Q 018446 281 TKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGER 338 (355)
Q Consensus 281 ~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~TfevDl~~t~~L~~~~~ 338 (355)
+++|+++||++||||||.+|+++|+.+ |+++||||||||+||++|+++|.+|++.++
T Consensus 162 ~~~a~~lGl~~lvevh~~eEl~~A~~~-ga~iIGinnr~l~t~~~dl~~~~~L~~~ip 218 (272)
T 3tsm_A 162 EDTAFALGMDALIEVHDEAEMERALKL-SSRLLGVNNRNLRSFEVNLAVSERLAKMAP 218 (272)
T ss_dssp HHHHHHTTCEEEEEECSHHHHHHHTTS-CCSEEEEECBCTTTCCBCTHHHHHHHHHSC
T ss_pred HHHHHHcCCeEEEEeCCHHHHHHHHhc-CCCEEEECCCCCccCCCChHHHHHHHHhCC
Confidence 999999999999999999999999997 999999999999999999999999987654
No 3
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=100.00 E-value=1.7e-62 Score=494.03 Aligned_cols=206 Identities=42% Similarity=0.683 Sum_probs=196.2
Q ss_pred ccHHHHHHHHHHHHHHHHhccCCHHHHHHhhhcCCCCccHHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHH
Q 018446 124 RNILEEIVWHKDVEVTQLKQRRPLSMLKNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIA 203 (355)
Q Consensus 124 ~~iLe~Iv~~K~~EV~~~k~~~pl~~L~~~l~~~pp~rdF~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA 203 (355)
.+||++|+++|++||+++++..|+.+|++.+. +++++|.++|++. +++|||||||+|||||.|+++|||.++|
T Consensus 2 ~~iL~~I~~~k~~ev~~~~~~~~~~~l~~~~~--~~~r~f~~al~~~-----~~~vIaEvKraSPSkG~i~~~~~~~~iA 74 (452)
T 1pii_A 2 QTVLAKIVADKAIWVEARKQQQPLASFQNEVQ--PSTRHFYDALQGA-----RTAFILECKKASPSKGVIRDDFDPARIA 74 (452)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHSCGGGTGGGCC--CCCSCHHHHHCSS-----SCEEEEEECSEETTTEESCSSCCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhcCCHHHHHhhcc--cCCCCHHHHHhcC-----CCceEEEecCCCCCCCccCCCCCHHHHH
Confidence 47999999999999999999999999987653 6789999999742 4799999999999999999999999999
Q ss_pred HHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHH
Q 018446 204 RSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKI 283 (355)
Q Consensus 204 ~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~ 283 (355)
++|+++ |+|||||||++||+||++||..||++ +++||||||||+|+|||+|||.+|||+||||+++|++++|++|+++
T Consensus 75 ~~y~~~-A~~IsvLTd~~~F~gs~~dL~~vr~~-v~lPvLrKDFI~d~~Qi~ea~~~GAD~ILLi~a~l~~~~l~~l~~~ 152 (452)
T 1pii_A 75 AIYKHY-ASAISVLTDEKYFQGSFNFLPIVSQI-APQPILCKDFIIDPYQIYLARYYQADACLLMLSVLDDDQYRQLAAV 152 (452)
T ss_dssp HHHTTT-CSEEEEECCSTTTCCCTTHHHHHHHH-CCSCEEEESCCCSHHHHHHHHHTTCSEEEEETTTCCHHHHHHHHHH
T ss_pred HHHHhh-CcEEEEEecccccCCCHHHHHHHHHh-cCCCeEEEeccCCHHHHHHHHHcCCCEEEEEcccCCHHHHHHHHHH
Confidence 999998 99999999999999999999999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCccccChhhHHhhhccccc
Q 018446 284 CKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERG 339 (355)
Q Consensus 284 A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~TfevDl~~t~~L~~~~~~ 339 (355)
|++|||++||||||++|+++|+.+ |+++||||||||+||++|+++|.+|++.++.
T Consensus 153 a~~lgm~~LvEvh~~eE~~~A~~l-ga~iIGinnr~L~t~~~dl~~~~~L~~~ip~ 207 (452)
T 1pii_A 153 AHSLEMGVLTEVSNEEEQERAIAL-GAKVVGINNRDLRDLSIDLNRTRELAPKLGH 207 (452)
T ss_dssp HHHTTCEEEEEECSHHHHHHHHHT-TCSEEEEESEETTTTEECTHHHHHHHHHHCT
T ss_pred HHHcCCeEEEEeCCHHHHHHHHHC-CCCEEEEeCCCCCCCCCCHHHHHHHHHhCCC
Confidence 999999999999999999999998 9999999999999999999999999876543
No 4
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=100.00 E-value=5.1e-62 Score=458.24 Aligned_cols=201 Identities=33% Similarity=0.489 Sum_probs=190.4
Q ss_pred cHHHHHHHHHHHHHHHHhccCCHHHHHHhhhcCCCCccHHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHH
Q 018446 125 NILEEIVWHKDVEVTQLKQRRPLSMLKNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIAR 204 (355)
Q Consensus 125 ~iLe~Iv~~K~~EV~~~k~~~pl~~L~~~l~~~pp~rdF~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~ 204 (355)
|||++|+++|+.||+++++..|+. . +++++|.++|++. ++++|||||||+|||+|.|+++|||.++|+
T Consensus 1 ~iL~~I~~~k~~ev~~~~~~~~~~------~--~~~~~f~~al~~~----~~~~vIaE~K~aSPSkG~i~~~~~~~~iA~ 68 (251)
T 1i4n_A 1 RRLWEIVEAKKKDILEIDGENLIV------Q--RRNHRFLEVLSGK----ERVKIIAEFKKASPSAGDINADASLEDFIR 68 (251)
T ss_dssp CCHHHHHHHHHHHGGGCCGGGCCC------C--CCCCHHHHHHCCS----SSCEEEEEECSBCSSSCBSCTTCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhhhCCCc------C--CCCcCHHHHHhhC----CCceEEEeecCCCCCCCccCCCCCHHHHHH
Confidence 689999999999999999999987 1 6789999999743 458999999999999999999999999999
Q ss_pred HHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHH
Q 018446 205 SYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKIC 284 (355)
Q Consensus 205 ~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A 284 (355)
+|+++ |+|||||||++||+||++||..||++ +++||||||||+|+|||++|+.+|||+||||+++|++++|++|+++|
T Consensus 69 ~y~~~-A~~IsVlTd~~~F~gs~~dL~~ir~~-v~lPvLrKDfi~~~~qi~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a 146 (251)
T 1i4n_A 69 MYDEL-ADAISILTEKHYFKGDPAFVRAARNL-TCRPILAKDFYIDTVQVKLASSVGADAILIIARILTAEQIKEIYEAA 146 (251)
T ss_dssp HHHHH-CSEEEEECCCSSSCCCTHHHHHHHTT-CCSCEEEECCCCSTHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHH
T ss_pred HHHHh-CCceEEEecccccCCCHHHHHHHHHh-CCCCEEEeeCCCCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHH
Confidence 99999 99999999999999999999999996 99999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCccccChhhHHhhhccccc
Q 018446 285 KLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGERG 339 (355)
Q Consensus 285 ~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~TfevDl~~t~~L~~~~~~ 339 (355)
+++||++||||||.+|+++|+.+.|+++||||||||+||++|+++|.+|++.++.
T Consensus 147 ~~lGl~~lvEv~~~eE~~~A~~l~g~~iIGinnr~l~t~~~d~~~~~~l~~~ip~ 201 (251)
T 1i4n_A 147 EELGMDSLVEVHSREDLEKVFSVIRPKIIGINTRDLDTFEIKKNVLWELLPLVPD 201 (251)
T ss_dssp HTTTCEEEEEECSHHHHHHHHTTCCCSEEEEECBCTTTCCBCTTHHHHHGGGSCT
T ss_pred HHcCCeEEEEeCCHHHHHHHHhcCCCCEEEEeCcccccCCCCHHHHHHHHHhCCC
Confidence 9999999999999999999999538999999999999999999999999887654
No 5
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=100.00 E-value=5.9e-60 Score=447.06 Aligned_cols=208 Identities=40% Similarity=0.615 Sum_probs=187.4
Q ss_pred cccHHHHHHHHHHHHHHHHhccCCHHHHHHhhhcCCCCccHHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHH
Q 018446 123 PRNILEEIVWHKDVEVTQLKQRRPLSMLKNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEI 202 (355)
Q Consensus 123 p~~iLe~Iv~~K~~EV~~~k~~~pl~~L~~~l~~~pp~rdF~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~i 202 (355)
|||||++|+++|++||+++|+..|+.+|++.+...|++++|.++|++. .++|||||||+|||+|+|+++|||.++
T Consensus 3 ~~~il~~i~~~k~~~v~~~~~~~~~~~l~~~~~~~~~~~~f~~al~~~-----~~~~IaE~K~asPs~g~i~~~~~p~~~ 77 (272)
T 3qja_A 3 PATVLDSILEGVRADVAAREASVSLSEIKAAAAAAPPPLDVMAALREP-----GIGVIAEVKRASPSAGALATIADPAKL 77 (272)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHSCCCCCHHHHHTSS-----SCEEEEEEC-------------CHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHhhCCHHHHHHHHhhCCCCCCHHHHHhcC-----CCeEEEEEecCCCCCCccCCCCCHHHH
Confidence 689999999999999999999999999999998889999999999742 379999999999999999999999999
Q ss_pred HHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHHHHH
Q 018446 203 ARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTK 282 (355)
Q Consensus 203 A~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~ 282 (355)
|+.|+++||+|||||||+.||+||++||..+|++ +++||||||||+|+|||++|+.+|||+|+||.+.|+++++.+|++
T Consensus 78 A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~-v~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~ 156 (272)
T 3qja_A 78 AQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRAS-VSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLD 156 (272)
T ss_dssp HHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHH-CSSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHh-CCCCEEECccccCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHH
Confidence 9999999999999999999999999999999996 999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCccccChhhHHhhhccc
Q 018446 283 ICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGE 337 (355)
Q Consensus 283 ~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~TfevDl~~t~~L~~~~ 337 (355)
.|+++||++||||||.+|+++|+.+ |+++|||||||++||++|++++.+|.+..
T Consensus 157 ~a~~lGl~~lvev~t~ee~~~A~~~-Gad~IGv~~r~l~~~~~dl~~~~~l~~~v 210 (272)
T 3qja_A 157 RTESLGMTALVEVHTEQEADRALKA-GAKVIGVNARDLMTLDVDRDCFARIAPGL 210 (272)
T ss_dssp HHHHTTCEEEEEESSHHHHHHHHHH-TCSEEEEESBCTTTCCBCTTHHHHHGGGS
T ss_pred HHHHCCCcEEEEcCCHHHHHHHHHC-CCCEEEECCCcccccccCHHHHHHHHHhC
Confidence 9999999999999999999999997 99999999999999999999999998754
No 6
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=100.00 E-value=3.1e-54 Score=403.41 Aligned_cols=198 Identities=40% Similarity=0.573 Sum_probs=185.7
Q ss_pred CCCcccHHHHHHHHHHHHHHHHhccCCHHHHHHhhhcCCCCccHHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCH
Q 018446 120 GNTPRNILEEIVWHKDVEVTQLKQRRPLSMLKNALDNAPPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDP 199 (355)
Q Consensus 120 ~~~p~~iLe~Iv~~K~~EV~~~k~~~pl~~L~~~l~~~pp~rdF~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp 199 (355)
.+.+.+||++|+++|++||+++++ . ..|++++|.++|+.. .++|||||||+|||||+|++ +||
T Consensus 5 ~~~~~~~l~~i~~~k~~~v~~~~~----------~-~~~~~~~~~~al~~~-----~~~~IaE~k~aSPskg~i~~-~~p 67 (254)
T 1vc4_A 5 LSRVPGVLGEIARKRASEVAPYPL----------P-EPPSVPSFKEALLRP-----GLSVIAEVKRQSPSEGLIRE-VDP 67 (254)
T ss_dssp CTTCCHHHHHHHHHHHHTCCCCCC----------C-CCCCCCCHHHHHTSS-----SCEEEEEECSCCTTTCCCCS-CCH
T ss_pred cchhhHHHHHHHHHHHHHHHHHHh----------c-cCCCccCHHHHHhhc-----CCcEEeeecCCCcCCCcCCC-CCH
Confidence 345568999999999999987766 1 447789999999742 37999999999999999999 999
Q ss_pred HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHH
Q 018446 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRY 279 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~ 279 (355)
.++|+.|+++||+|||||||+.||+|+++||..+|++ +++||||||||+|+|||++|+.+|||+|+|+++.|+ +++++
T Consensus 68 ~~~A~~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~~-v~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l~-~~l~~ 145 (254)
T 1vc4_A 68 VEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREA-VDLPLLRKDFVVDPFMLEEARAFGASAALLIVALLG-ELTGA 145 (254)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHHH-CCSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHHG-GGHHH
T ss_pred HHHHHHHHHcCCCEEEEecchhhhccCHHHHHHHHHh-cCCCEEECCcCCCHHHHHHHHHcCCCEEEECccchH-HHHHH
Confidence 9999999999999999999999999999999999996 999999999999999999999999999999999999 89999
Q ss_pred HHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCccccChhhHHhhhccc
Q 018446 280 MTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGE 337 (355)
Q Consensus 280 L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~TfevDl~~t~~L~~~~ 337 (355)
|++.|+++||+++|||||++|+++|+.+ |+++|||||||++||.+|++++.+|.+..
T Consensus 146 l~~~a~~lGl~~lvev~~~~E~~~a~~~-gad~IGvn~~~l~~~~~dl~~~~~L~~~i 202 (254)
T 1vc4_A 146 YLEEARRLGLEALVEVHTERELEIALEA-GAEVLGINNRDLATLHINLETAPRLGRLA 202 (254)
T ss_dssp HHHHHHHHTCEEEEEECSHHHHHHHHHH-TCSEEEEESBCTTTCCBCTTHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECCHHHHHHHHHc-CCCEEEEccccCcCCCCCHHHHHHHHHhC
Confidence 9999999999999999999999999998 99999999999999999999999998754
No 7
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=99.89 E-value=2e-26 Score=224.23 Aligned_cols=131 Identities=24% Similarity=0.205 Sum_probs=111.2
Q ss_pred CCCHHHHHHHHHHcCceEEEEe----ccCCCCCC-----CHHHHHHHHhcCCCCCeeccccc--cCHHHHHHHHHcCCcc
Q 018446 196 DFDPVEIARSYEKGGAACLSIL----TDEKYFKG-----SFENLEAVRSAGVKCPLLCKEFI--VDAWQIYYARTKGADA 264 (355)
Q Consensus 196 ~~Dp~~iA~~Ye~~GAaaISVL----TD~~fF~G-----S~edL~~VR~a~v~lPVLrKDFI--IdpyQI~eAr~~GADA 264 (355)
++++.++|+.|+++||+|||+| ||.+||+| +++++..++++ |++||++|||| +++|||+|| +|||+
T Consensus 23 d~~~~e~A~~ae~aGA~aI~~l~~v~~d~~~~~G~arm~~p~~i~~I~~a-v~iPV~~K~rig~~~e~qilea--~GaD~ 99 (330)
T 2yzr_A 23 DVTNVEQAQIAEEAGAVAVMALERVPADIRAAGGVARMSDPALIEEIMDA-VSIPVMAKCRIGHTTEALVLEA--IGVDM 99 (330)
T ss_dssp EESSHHHHHHHHHHTCSEEEECSSCHHHHC--CCCCCCCCHHHHHHHHHH-CSSCEEEEEETTCHHHHHHHHH--TTCSE
T ss_pred eCCHHHHHHHHHHcCCCEEEecCCccccccCCcchhhcCCHHHHHHHHHh-cCCCeEEEEeecchHHHHHHHH--cCCCE
Confidence 5577899999999999999999 89999999 99999999997 99999999999 999999999 99999
Q ss_pred hHHHHhcCCHHHH--------------------HHHHHHHH----------HcCCcEEEEe--C--------------CH
Q 018446 265 VLLIAAVLPDLDI--------------------RYMTKICK----------LLGLTALVEV--H--------------DE 298 (355)
Q Consensus 265 VLLIaaiL~~~~L--------------------~~L~~~A~----------~LGLeaLVEV--H--------------~~ 298 (355)
|+ +..+|++.++ .+.++.+. +-||+.|||+ | |.
T Consensus 100 Id-~s~~l~p~d~~~~i~k~~~~~~~~~~a~~lgea~r~~~~Ga~~i~t~ge~g~~~~ve~v~H~r~~~~~~~~~s~~~~ 178 (330)
T 2yzr_A 100 ID-ESEVLTQADPFFHIYKKKFNVPFVCGARNLGEAVRRIWEGAAMIRTKGEAGTGNIVEAVRHMRLMNEAIAQLQRMTD 178 (330)
T ss_dssp EE-EETTSCCSCSSCCCCGGGCSSCEEEECSSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHTTSCH
T ss_pred Ee-hhccCCHHHHHHHhhhhhcccchhhccccHHHHHHHHhcCcceeeccCCCCcccchhHHHHHHHHHHHHHHhccCCH
Confidence 96 9889887654 22222221 1349999999 7 99
Q ss_pred HHHHH-HhccCCCeE----------EEeeCCCCCccccChhhHH
Q 018446 299 REMDR-VLGIEGIEL----------IGINNRNLETFEVDNSNTK 331 (355)
Q Consensus 299 eELer-Al~l~ga~i----------IGINNRdL~TfevDl~~t~ 331 (355)
+|+.+ |... |+++ +|+|||||.+|.+++..|.
T Consensus 179 ~El~~~A~~~-gadyv~~~~~vt~~~G~~~r~Lg~G~Vf~T~TK 221 (330)
T 2yzr_A 179 EEVYGVAKFY-ANRYAELAKTVREGMGLPATVLENEPIYEGFTL 221 (330)
T ss_dssp HHHHHHHHHH-HGGGGHHHHHHHHHTTSCSCCCTTSEEETTEEH
T ss_pred HHHHHHHHHc-CCCEeecccchhhhccccccccccccccCCCcc
Confidence 99977 7776 8999 9999999999999994444
No 8
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=99.88 E-value=1.2e-22 Score=187.26 Aligned_cols=146 Identities=21% Similarity=0.277 Sum_probs=127.4
Q ss_pred eEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCee---ccc-----ccc
Q 018446 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL---CKE-----FIV 249 (355)
Q Consensus 178 aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVL---rKD-----FII 249 (355)
++|+.| ..+..+.++..+++.++|++|+++||.|||+ |++++++.+|+. +++||| +|| |+|
T Consensus 19 ~livsc--q~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~--------~~~~~i~~ir~~-v~~Pvig~~k~~~~~~~~~I 87 (229)
T 3q58_A 19 GLIVSC--QPVPGSPMDKPEIVAAMAQAAASAGAVAVRI--------EGIENLRTVRPH-LSVPIIGIIKRDLTGSPVRI 87 (229)
T ss_dssp CEEEEC--CCCTTSTTCSHHHHHHHHHHHHHTTCSEEEE--------ESHHHHHHHGGG-CCSCEEEECBCCCSSCCCCB
T ss_pred CEEEEE--eCCCCCCCCCcchHHHHHHHHHHCCCcEEEE--------CCHHHHHHHHHh-cCCCEEEEEeecCCCCceEe
Confidence 366665 3355556788889999999999999999998 789999999996 999998 777 889
Q ss_pred CHH--HHHHHHHcCCcchHHHHhcC-CHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCC----c
Q 018446 250 DAW--QIYYARTKGADAVLLIAAVL-PDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLE----T 322 (355)
Q Consensus 250 dpy--QI~eAr~~GADAVLLIaaiL-~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~----T 322 (355)
+|| |+++++.+|||.|+|+++.+ .++.+.++++.++++|+.++++|||.+|++++.++ |+++||+|++++. +
T Consensus 88 ~~~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~-Gad~Ig~~~~g~t~~~~~ 166 (229)
T 3q58_A 88 TPYLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLHGLLAMADCSTVNEGISCHQK-GIEFIGTTLSGYTGPITP 166 (229)
T ss_dssp SCSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECSSHHHHHHHHHT-TCSEEECTTTTSSSSCCC
T ss_pred CccHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHCCCEEEEecCCHHHHHHHHhC-CCCEEEecCccCCCCCcC
Confidence 987 89999999999999999874 67789999999999999999999999999999997 9999999999885 4
Q ss_pred cccChhhHHhhhc
Q 018446 323 FEVDNSNTKKLLE 335 (355)
Q Consensus 323 fevDl~~t~~L~~ 335 (355)
+..|++...++.+
T Consensus 167 ~~~~~~li~~l~~ 179 (229)
T 3q58_A 167 VEPDLAMVTQLSH 179 (229)
T ss_dssp SSCCHHHHHHHHT
T ss_pred CCCCHHHHHHHHH
Confidence 5677777777754
No 9
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=99.87 E-value=7.7e-24 Score=203.23 Aligned_cols=120 Identities=21% Similarity=0.187 Sum_probs=98.7
Q ss_pred CCCCCCCCCHHHHHHHHHHcCceEEEEe----ccCCCCCC-----CHHHHHHHHhcCCCCCeecc---ccccCHHHHHHH
Q 018446 190 RGILREDFDPVEIARSYEKGGAACLSIL----TDEKYFKG-----SFENLEAVRSAGVKCPLLCK---EFIVDAWQIYYA 257 (355)
Q Consensus 190 kG~I~~~~Dp~~iA~~Ye~~GAaaISVL----TD~~fF~G-----S~edL~~VR~a~v~lPVLrK---DFIIdpyQI~eA 257 (355)
||-+..+|+|.++|+.|+++||+||||| ||..||+| ++++|+.||++ +++|||+| || +++||+++
T Consensus 21 kggv~~d~~~~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~-v~iPvl~k~~i~~-ide~qil~- 97 (297)
T 4adt_A 21 KGGVIMDVKNVEQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKC-ISINVLAKVRIGH-FVEAQILE- 97 (297)
T ss_dssp TTCEEEEESSHHHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTT-CCSEEEEEEETTC-HHHHHHHH-
T ss_pred cCCcccCCCcHHHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHh-cCCCEEEeccCCc-HHHHHHHH-
Confidence 4444456688899999999999999999 79999999 99999999996 99999988 55 89999998
Q ss_pred HHcCCcchHHHHhcCCHHHHHHHHHHHHH--cCCcEEEEeCCHHHHHHHhccCCCeEEEeeCC
Q 018446 258 RTKGADAVLLIAAVLPDLDIRYMTKICKL--LGLTALVEVHDEREMDRVLGIEGIELIGINNR 318 (355)
Q Consensus 258 r~~GADAVLLIaaiL~~~~L~~L~~~A~~--LGLeaLVEVH~~eELerAl~l~ga~iIGINNR 318 (355)
.+|||+| .....++ +.++++.+++ +|+..++||||.+|+.+++.+ |+++||+|||
T Consensus 98 -aaGAD~I-d~s~~~~---~~~li~~i~~~~~g~~vvv~v~~~~Ea~~a~~~-Gad~I~v~g~ 154 (297)
T 4adt_A 98 -ELKVDML-DESEVLT---MADEYNHINKHKFKTPFVCGCTNLGEALRRISE-GASMIRTKGE 154 (297)
T ss_dssp -HTTCSEE-EEETTSC---CSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHH-TCSEEEECCC
T ss_pred -HcCCCEE-EcCCCCC---HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhC-CCCEEEECCC
Confidence 5999999 4444444 3456777777 799999999999999999997 9999999988
No 10
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=99.87 E-value=3.4e-22 Score=184.45 Aligned_cols=145 Identities=17% Similarity=0.204 Sum_probs=126.7
Q ss_pred EEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCee---ccc-----cccC
Q 018446 179 LIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL---CKE-----FIVD 250 (355)
Q Consensus 179 VIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVL---rKD-----FIId 250 (355)
+|+.| ..+..+.++..+++.++|++|+++||.|||+ |++++++.+|+. +++||| +|| |+|+
T Consensus 20 livsc--q~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~--------~~~~~i~~ir~~-v~~Pvig~~k~d~~~~~~~I~ 88 (232)
T 3igs_A 20 LIVSC--QPVPGSPLDKPEIVAAMALAAEQAGAVAVRI--------EGIDNLRMTRSL-VSVPIIGIIKRDLDESPVRIT 88 (232)
T ss_dssp EEEEC--CCCTTCTTCSHHHHHHHHHHHHHTTCSEEEE--------ESHHHHHHHHTT-CCSCEEEECBCCCSSCCCCBS
T ss_pred EEEEE--eCCCCCCCCCcchHHHHHHHHHHCCCeEEEE--------CCHHHHHHHHHh-cCCCEEEEEeecCCCcceEeC
Confidence 56655 3345566788899999999999999999998 789999999996 999998 776 7899
Q ss_pred HH--HHHHHHHcCCcchHHHHhcC-CHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCc----c
Q 018446 251 AW--QIYYARTKGADAVLLIAAVL-PDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLET----F 323 (355)
Q Consensus 251 py--QI~eAr~~GADAVLLIaaiL-~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~T----f 323 (355)
+| |+++++.+|||.|+|+++.+ .++.+.++++.++++|+.++++|||.+|++++.++ |+++||+|++++.+ +
T Consensus 89 ~~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~-Gad~Ig~~~~g~t~~~~~~ 167 (232)
T 3igs_A 89 PFLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHHHLLTMADCSSVDDGLACQRL-GADIIGTTMSGYTTPDTPE 167 (232)
T ss_dssp CSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECCSHHHHHHHHHT-TCSEEECTTTTSSSSSCCS
T ss_pred ccHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHhC-CCCEEEEcCccCCCCCCCC
Confidence 87 99999999999999999874 56789999999999999999999999999999997 99999999998854 5
Q ss_pred ccChhhHHhhhc
Q 018446 324 EVDNSNTKKLLE 335 (355)
Q Consensus 324 evDl~~t~~L~~ 335 (355)
..|++...++.+
T Consensus 168 ~~~~~~i~~l~~ 179 (232)
T 3igs_A 168 EPDLPLVKALHD 179 (232)
T ss_dssp SCCHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 677777777754
No 11
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=99.81 E-value=3.4e-20 Score=171.85 Aligned_cols=114 Identities=15% Similarity=0.202 Sum_probs=107.9
Q ss_pred CCCCCCCHHHHHHHHhcCCCCCeeccccccCHHH---------HHHHHHcCCcchHHHHhc--CCHHHHHHHHHHHHHcC
Q 018446 220 EKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQ---------IYYARTKGADAVLLIAAV--LPDLDIRYMTKICKLLG 288 (355)
Q Consensus 220 ~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQ---------I~eAr~~GADAVLLIaai--L~~~~L~~L~~~A~~LG 288 (355)
+.||.|++.+|..+|+. +++||++|| +|+|| +++++.+|||+|||+.+. +...++..+++.|.++|
T Consensus 41 ~~~~~~~~~~L~~v~~~-~~i~v~aQd--v~~~~~Ga~TGeis~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~G 117 (225)
T 1hg3_A 41 TIVVAPQLVDLRMIAES-VEIPVFAQH--IDPIKPGSHTGHVLPEAVKEAGAVGTLLNHSENRMILADLEAAIRRAEEVG 117 (225)
T ss_dssp EEEEECCHHHHHHHHHS-CSSCBEESC--CCSCCSBSCTTCCCHHHHHHTTCCEEEESCGGGCCBHHHHHHHHHHHHHHT
T ss_pred cEEEeCCHHHHHHHHHh-cCCceeeee--CCcccCCCccCcccHHHHHHcCCCEEEECcchhcCCHHHHHHHHHHHHHCC
Confidence 46999999999999996 799999999 99999 999999999999999999 99999999999999999
Q ss_pred CcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCC-------ccccC-hhhHHhhhccc
Q 018446 289 LTALVEVHDEREMDRVLGIEGIELIGINNRNLE-------TFEVD-NSNTKKLLEGE 337 (355)
Q Consensus 289 LeaLVEVH~~eELerAl~l~ga~iIGINNRdL~-------TfevD-l~~t~~L~~~~ 337 (355)
|++|||||+.+|++++..+ ++.+||+|||++. ||++| ++++.++++..
T Consensus 118 L~~ivcVge~~e~~~~~~~-~~~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~ 173 (225)
T 1hg3_A 118 LMTMVCSNNPAVSAAVAAL-NPDYVAVEPPELIGTGIPVSKAKPEVITNTVELVKKV 173 (225)
T ss_dssp CEEEEEESSHHHHHHHHTT-CCSEEEECCTTTTTTSCCTTTSCTHHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHhcC-CCCEEEEeChhhhccCCCCCCCChhHHHHHHHHHHhc
Confidence 9999999999999999887 7899999999997 99999 99999998754
No 12
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=99.79 E-value=3e-20 Score=172.40 Aligned_cols=114 Identities=18% Similarity=0.217 Sum_probs=107.8
Q ss_pred CCCCCCCHHHHHHHHhcCCCCCeeccccccCHHH---------HHHHHHcCCcchHHHHhc--CCHHHHHHHHHHHHHcC
Q 018446 220 EKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQ---------IYYARTKGADAVLLIAAV--LPDLDIRYMTKICKLLG 288 (355)
Q Consensus 220 ~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQ---------I~eAr~~GADAVLLIaai--L~~~~L~~L~~~A~~LG 288 (355)
+.||.|++.+|..+|+. +++||++|| +|+|| +++++.+|||+|||+.+. +...++..+++.|.++|
T Consensus 38 ~~~~~p~~~~L~~v~~~-~~i~v~aQd--v~~~~~Ga~TGeis~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~G 114 (226)
T 1w0m_A 38 NIVVAPNHLELGLVSQS-VDIPVYAQG--ADVEAGGAHTAHVSLENIKEAGGSGVILNHSEAPLKLNDLARLVAKAKSLG 114 (226)
T ss_dssp EEEEECCGGGHHHHHTT-CSSCBEESC--CSBSSCSSCTTCCBHHHHHHHTCCEEEECCTTSCCBHHHHHHHHHHHHHTT
T ss_pred cEEEeCCHHHHHHHHHh-cCCceEeeE--CChhhCCCccCCCCHHHHHHcCCCEEEEeeeeccCCHHHHHHHHHHHHHCC
Confidence 46999999999999986 799999999 99999 999999999999999999 99999999999999999
Q ss_pred CcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCC-------ccccC-hhhHHhhhccc
Q 018446 289 LTALVEVHDEREMDRVLGIEGIELIGINNRNLE-------TFEVD-NSNTKKLLEGE 337 (355)
Q Consensus 289 LeaLVEVH~~eELerAl~l~ga~iIGINNRdL~-------TfevD-l~~t~~L~~~~ 337 (355)
|++|||||+..|++++..+ ++.+||+|||++. ||++| ++++.++++.+
T Consensus 115 L~~ivcVge~~e~~~~~~~-~~~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~ 170 (226)
T 1w0m_A 115 LDVVVCAPDPRTSLAAAAL-GPHAVAVEPPELIGTGRAVSRYKPEAIVETVGLVSRH 170 (226)
T ss_dssp CEEEEEESSHHHHHHHHHT-CCSEEEECCGGGTTTSCCHHHHCHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHhcC-CCCEEEEcChhhhccCCCCCCCChhHHHHHHHHHHhc
Confidence 9999999999999999887 7899999999998 99999 99999998754
No 13
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=99.66 E-value=4.1e-17 Score=148.80 Aligned_cols=113 Identities=17% Similarity=0.236 Sum_probs=98.6
Q ss_pred CCCCCCCHHHHHHHHhcCCCCCeeccccccCHHH---------HHHHHHcCCcchHHHHh--cCCHHHHHHHHHHHHHcC
Q 018446 220 EKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQ---------IYYARTKGADAVLLIAA--VLPDLDIRYMTKICKLLG 288 (355)
Q Consensus 220 ~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQ---------I~eAr~~GADAVLLIaa--iL~~~~L~~L~~~A~~LG 288 (355)
+.||.|++.+|..+|+. +++||++|| +|+|| +.+++.+|||+|+|+.+ .|+.+++.++++.|+++|
T Consensus 35 ~~~~~~~~~~l~~v~~~-~~~~v~aqd--~~~~~~ga~tGei~~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~G 111 (219)
T 2h6r_A 35 TIGVAPQFVDLRMIVEN-VNIPVYAQH--IDNINPGSHTGHILAEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLG 111 (219)
T ss_dssp CEEEECCTTTHHHHHHH-CCSCBEESC--CCSCCSBSCTTCCCHHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHT
T ss_pred cEEEECCHHHHHHHHHH-cCCcEEEEE--CChhhcCCccCchHHHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCC
Confidence 56999999999999996 799999999 78999 99999999999999987 798889999999999999
Q ss_pred CcEEEEeCCHHHHHHHhccCCCeEEEeeCCCC-------CccccC-hhhHHhhhcc
Q 018446 289 LTALVEVHDEREMDRVLGIEGIELIGINNRNL-------ETFEVD-NSNTKKLLEG 336 (355)
Q Consensus 289 LeaLVEVH~~eELerAl~l~ga~iIGINNRdL-------~TfevD-l~~t~~L~~~ 336 (355)
|+++++||+.+|.+++..+ ++.+||+|+|++ +||+.| ++.+.++++.
T Consensus 112 l~~iv~v~~~~e~~~~~~~-~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~ 166 (219)
T 2h6r_A 112 LETIVCTNNINTSKAVAAL-SPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKE 166 (219)
T ss_dssp CEEEEEESSSHHHHHHTTT-CCSEEEECCCC--------------CSHHHHHHHHH
T ss_pred CeEEEEeCCchHHHHHHhC-CCCEEEEEeccccccCCCCccCCHHHHHHHHHHHHh
Confidence 9999999999999999887 889999999999 899998 8888777764
No 14
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=99.50 E-value=4.2e-15 Score=140.65 Aligned_cols=117 Identities=22% Similarity=0.242 Sum_probs=99.8
Q ss_pred CCCCCCCHHHHHHHHHHcCceEEEEec----cCCCCCC-----CHHHHHHHHhcCCCCCeeccccc--cCHHHHHHHHHc
Q 018446 192 ILREDFDPVEIARSYEKGGAACLSILT----DEKYFKG-----SFENLEAVRSAGVKCPLLCKEFI--VDAWQIYYARTK 260 (355)
Q Consensus 192 ~I~~~~Dp~~iA~~Ye~~GAaaISVLT----D~~fF~G-----S~edL~~VR~a~v~lPVLrKDFI--IdpyQI~eAr~~ 260 (355)
+|. +.||.++|+.|+++||++|++|+ +.++|+| +++.+..+++. +++||++||++ ++.+|++++ +
T Consensus 24 ~i~-~~~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~-~~iPv~~k~r~g~~~~~~~~~a--~ 99 (305)
T 2nv1_A 24 VIM-DVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNA-VSIPVMAKARIGHIVEARVLEA--M 99 (305)
T ss_dssp EEE-EESSHHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHH-CSSCEEEEECTTCHHHHHHHHH--H
T ss_pred eee-cCCHHHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHh-CCCCEEecccccchHHHHHHHH--C
Confidence 443 45888999999999999999997 7889999 89999999986 89999999999 888888776 9
Q ss_pred CCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEe
Q 018446 261 GADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGI 315 (355)
Q Consensus 261 GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGI 315 (355)
|||+|+ +...+++.++.++++ ++.+|+..++.+||.+|+.++++. |+++|++
T Consensus 100 GAd~V~-~~~~l~~~~~~~~i~-~~~~g~~v~~~~~~~~e~~~a~~~-Gad~V~~ 151 (305)
T 2nv1_A 100 GVDYID-ESEVLTPADEEFHLN-KNEYTVPFVCGCRDLGEATRRIAE-GASMLRT 151 (305)
T ss_dssp TCSEEE-ECTTSCCSCSSCCCC-GGGCSSCEEEEESSHHHHHHHHHT-TCSEEEE
T ss_pred CCCEEE-EeccCCHHHHHHHHH-HhccCCcEEEEeCCHHHHHHHHHC-CCCEEEe
Confidence 999997 777778777777777 889999999999999999999985 9998877
No 15
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=99.41 E-value=7e-15 Score=140.87 Aligned_cols=111 Identities=22% Similarity=0.167 Sum_probs=96.1
Q ss_pred HHHHHHHHHHcCceEEEEe----ccCCCCCC-----CHHHHHHHHhcCCCCCeeccccccC--HHHHHHHHHcCCcchHH
Q 018446 199 PVEIARSYEKGGAACLSIL----TDEKYFKG-----SFENLEAVRSAGVKCPLLCKEFIVD--AWQIYYARTKGADAVLL 267 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVL----TD~~fF~G-----S~edL~~VR~a~v~lPVLrKDFIId--pyQI~eAr~~GADAVLL 267 (355)
..++|+.|+++||.|+++| ||.++|+| ++++++.|+++ |++||+.|++|-| +.|+.++ +|||.| -
T Consensus 20 ~~eqa~iae~aGa~av~~l~~~p~d~r~~gGv~Rm~dp~~I~~I~~a-VsIPVm~k~righ~~EAqilea--~GaD~I-D 95 (291)
T 3o07_A 20 TPEQAKIAEKSGACAVMALESIPADMRKSGKVCRMSDPKMIKDIMNS-VSIPVMAKVRIGHFVEAQIIEA--LEVDYI-D 95 (291)
T ss_dssp SHHHHHHHHHHTCSEEEECSSCHHHHHTTTCCCCCCCHHHHHHHHTT-CSSCEEEEEETTCHHHHHHHHH--TTCSEE-E
T ss_pred CHHHHHHHHHhCchhhhhccCCCchhhhcCCccccCCHHHHHHHHHh-CCCCeEEEEecCcHHHHHHHHH--cCCCEE-e
Confidence 3479999999999999999 99999999 49999999996 9999999999999 9999999 999988 5
Q ss_pred HHhcCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEe
Q 018446 268 IAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGI 315 (355)
Q Consensus 268 IaaiL~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGI 315 (355)
-..+|++.++.+.++. +.++.--+.+++|.+|+.|++.. ||++||.
T Consensus 96 esevltpad~~~~I~k-~~f~vpfv~~~~~l~EAlrri~e-GA~mIrT 141 (291)
T 3o07_A 96 ESEVLTPADWTHHIEK-DKFKVPFVCGAKDLGEALRRINE-GAAMIRT 141 (291)
T ss_dssp EETTSCCSCSSCCCCG-GGCSSCEEEEESSHHHHHHHHHH-TCSEEEE
T ss_pred cccCCCHHHHHHHhhh-hcCCCcEEeeCCCHHHHHHHHHC-CCCEEEe
Confidence 5677777666554444 45677444599999999999996 9999996
No 16
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=99.37 E-value=9.1e-13 Score=120.36 Aligned_cols=144 Identities=18% Similarity=0.074 Sum_probs=112.0
Q ss_pred CCCCCCCCCHHHHHHHHHHcCceEEEEeccCCC-CCCC---HHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcch
Q 018446 190 RGILREDFDPVEIARSYEKGGAACLSILTDEKY-FKGS---FENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAV 265 (355)
Q Consensus 190 kG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~f-F~GS---~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAV 265 (355)
.|....+.|+.++|+.|+++||++|.| ||... |.|. ++.++.+++. +++||+.+++|-+++|+.++...|||+|
T Consensus 23 ~g~~~~~~~~~~~a~~~~~~Ga~~i~v-~d~~~~~~~~g~~~~~i~~i~~~-~~iPvi~~ggi~~~~~i~~~~~~Gad~v 100 (266)
T 2w6r_A 23 SGKKNTGILLRDWVVEVEKRGAGEILL-TSIDRDGTKSGYDTEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLAGADKA 100 (266)
T ss_dssp TTTEEEEEEHHHHHHHHHHHTCSEEEE-EETTTSSCSSCCCHHHHHHHGGG-CCSCEEEESCCCSTHHHHHHHHHTCSEE
T ss_pred CCeeccCCCHHHHHHHHHHCCCCEEEE-EecCcccCCCcccHHHHHHHHHh-cCCCEEEECCCCCHHHHHHHHHcCCcHh
Confidence 344445568999999999999999999 66553 3444 8999999986 8999999999999999999999999999
Q ss_pred HHHHhcC----CHHHHHHHHHHHH--H----cCCcE-------EEEeCC--------HHH-HHHHhccCCCeEEEeeC--
Q 018446 266 LLIAAVL----PDLDIRYMTKICK--L----LGLTA-------LVEVHD--------ERE-MDRVLGIEGIELIGINN-- 317 (355)
Q Consensus 266 LLIaaiL----~~~~L~~L~~~A~--~----LGLea-------LVEVH~--------~eE-LerAl~l~ga~iIGINN-- 317 (355)
++..+.+ +++.++++.+.+. . +++++ .|++|+ ..| ++++..+ |+..|.+++
T Consensus 101 ~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~-G~~~i~~t~~~ 179 (266)
T 2w6r_A 101 LAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEKR-GAGEILLTSID 179 (266)
T ss_dssp ECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHT-TCSEEEEEETT
T ss_pred hhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHHc-CCCEEEEEeec
Confidence 9999999 4455555554443 2 56776 688886 345 4777776 999999987
Q ss_pred CCCCccccChhhHHhhhcc
Q 018446 318 RNLETFEVDNSNTKKLLEG 336 (355)
Q Consensus 318 RdL~TfevDl~~t~~L~~~ 336 (355)
||...+.+|++...+|.+.
T Consensus 180 ~~g~~~g~~~~~i~~l~~~ 198 (266)
T 2w6r_A 180 RDGTKSGYDTEMIRFVRPL 198 (266)
T ss_dssp TTTTCSCCCHHHHHHHGGG
T ss_pred CCCCcCCCCHHHHHHHHHH
Confidence 6777788999999888765
No 17
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=99.33 E-value=2e-12 Score=116.53 Aligned_cols=135 Identities=14% Similarity=0.132 Sum_probs=108.6
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCCCH--HHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHH
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKGSF--ENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDL 275 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~--edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~ 275 (355)
||.++|+.|+++||++|+|.+...+|.|.. +.++.+++. +++|++.+++|.++.|+.++..+|||+|.+....|.+.
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~~~i~~i~~~-~~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~l~~p 110 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGSNHELLAEVVGK-LDVQVELSGGIRDDESLAAALATGCARVNVGTAALENP 110 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCCCHHHHHHHHHH-CSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHCH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCChHHHHHHHHHh-cCCcEEEECCCCCHHHHHHHHHcCCCEEEECchHhhCh
Confidence 899999999999999999998777787776 788999886 89999999999999999999999999999999887532
Q ss_pred HHHHHHHHHHH------cCCcEE-------EEeCC--------HHHHHHHhccCCCeEEEeeCCCCCcc--ccChhhHHh
Q 018446 276 DIRYMTKICKL------LGLTAL-------VEVHD--------EREMDRVLGIEGIELIGINNRNLETF--EVDNSNTKK 332 (355)
Q Consensus 276 ~L~~L~~~A~~------LGLeaL-------VEVH~--------~eELerAl~l~ga~iIGINNRdL~Tf--evDl~~t~~ 332 (355)
..+.+..+. +|+++. |.+|. .+.++++.+. |++.|.+++|+.... .+|++...+
T Consensus 111 --~~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~-G~~~i~~~~~~~~~~~~g~~~~~~~~ 187 (244)
T 2y88_A 111 --QWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSE-GCSRFVVTDITKDGTLGGPNLDLLAG 187 (244)
T ss_dssp --HHHHHHHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHT-TCCCEEEEETTTTTTTSCCCHHHHHH
T ss_pred --HHHHHHHHHcCCCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHhC-CCCEEEEEecCCccccCCCCHHHHHH
Confidence 233344444 345655 33333 5666888886 999999999998644 578888888
Q ss_pred hhcc
Q 018446 333 LLEG 336 (355)
Q Consensus 333 L~~~ 336 (355)
+.+.
T Consensus 188 l~~~ 191 (244)
T 2y88_A 188 VADR 191 (244)
T ss_dssp HHTT
T ss_pred HHHh
Confidence 8764
No 18
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.25 E-value=3.4e-11 Score=109.00 Aligned_cols=141 Identities=20% Similarity=0.138 Sum_probs=110.5
Q ss_pred CCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCH---HHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHh
Q 018446 194 REDFDPVEIARSYEKGGAACLSILTDEKYFKGSF---ENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA 270 (355)
Q Consensus 194 ~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~---edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaa 270 (355)
....||.++|+.|+++||++|+|..-..+|.|.. +.++.+++. +++||+..++|.++.|+.++..+|||+|.+..+
T Consensus 27 ~~~~d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~-~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~ 105 (253)
T 1thf_D 27 RDSGDPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQ-IDIPFTVGGGIHDFETASELILRGADKVSINTA 105 (253)
T ss_dssp SCTTCHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTT-CCSCEEEESSCCSHHHHHHHHHTTCSEEEESHH
T ss_pred eeccCHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHh-CCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChH
Confidence 3456999999999999999999996666777654 445667774 799999999999999999999999999999888
Q ss_pred cCCH-HHHHHHHHHHH----HcCCcE-------EEEeCCH---------HHHHHHhccCCCeEEEee--CCCCCccccCh
Q 018446 271 VLPD-LDIRYMTKICK----LLGLTA-------LVEVHDE---------REMDRVLGIEGIELIGIN--NRNLETFEVDN 327 (355)
Q Consensus 271 iL~~-~~L~~L~~~A~----~LGLea-------LVEVH~~---------eELerAl~l~ga~iIGIN--NRdL~TfevDl 327 (355)
.+.+ +.+.++.+... .+|+++ .|++|.. +.++++.++ |+..|.++ +|+.....+|+
T Consensus 106 ~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~-G~~~i~~~~~~~~g~~~g~~~ 184 (253)
T 1thf_D 106 AVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKR-GAGEILLTSIDRDGTKSGYDT 184 (253)
T ss_dssp HHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHT-TCSEEEEEETTTTTSCSCCCH
T ss_pred HHhChHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHHC-CCCEEEEEeccCCCCCCCCCH
Confidence 8853 33555554432 256776 6787763 446778886 89988887 56777778899
Q ss_pred hhHHhhhcc
Q 018446 328 SNTKKLLEG 336 (355)
Q Consensus 328 ~~t~~L~~~ 336 (355)
+...++.+.
T Consensus 185 ~~~~~l~~~ 193 (253)
T 1thf_D 185 EMIRFVRPL 193 (253)
T ss_dssp HHHHHHGGG
T ss_pred HHHHHHHHh
Confidence 999888764
No 19
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=99.23 E-value=5.2e-11 Score=107.22 Aligned_cols=128 Identities=13% Similarity=0.148 Sum_probs=107.6
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCee---cccc-----ccC--HHHHHHHHHcCCcchHH
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL---CKEF-----IVD--AWQIYYARTKGADAVLL 267 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVL---rKDF-----IId--pyQI~eAr~~GADAVLL 267 (355)
+..++|++|+++||.+|++. +++++..+|+. +++|++ ++|| +++ ..|+.++..+|||.|.+
T Consensus 37 ~~~~~a~~~~~~G~~~i~~~--------~~~~i~~i~~~-~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l 107 (234)
T 1yxy_A 37 IMPLMAKAAQEAGAVGIRAN--------SVRDIKEIQAI-TDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAM 107 (234)
T ss_dssp SHHHHHHHHHHHTCSEEEEE--------SHHHHHHHHTT-CCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEE
T ss_pred hHHHHHHHHHHCCCcEeecC--------CHHHHHHHHHh-CCCCEEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEE
Confidence 78899999999999999985 67999999986 899996 6775 343 46999999999999999
Q ss_pred HHhcCCH---HHHHHHHHHHHHc--CCcEEEEeCCHHHHHHHhccCCCeEE-----EeeCCCCCccccChhhHHhhhc
Q 018446 268 IAAVLPD---LDIRYMTKICKLL--GLTALVEVHDEREMDRVLGIEGIELI-----GINNRNLETFEVDNSNTKKLLE 335 (355)
Q Consensus 268 IaaiL~~---~~L~~L~~~A~~L--GLeaLVEVH~~eELerAl~l~ga~iI-----GINNRdL~TfevDl~~t~~L~~ 335 (355)
....+.. ..+.++++.++++ |+..++++|+.+|+.++... |++.| |+|+....++..+++...++.+
T Consensus 108 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t~~ea~~a~~~-Gad~i~~~v~g~~~~~~~~~~~~~~~i~~~~~ 184 (234)
T 1yxy_A 108 DCTKRDRHDGLDIASFIRQVKEKYPNQLLMADISTFDEGLVAHQA-GIDFVGTTLSGYTPYSRQEAGPDVALIEALCK 184 (234)
T ss_dssp ECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECSSHHHHHHHHHT-TCSEEECTTTTSSTTSCCSSSCCHHHHHHHHH
T ss_pred cccccCCCCCccHHHHHHHHHHhCCCCeEEEeCCCHHHHHHHHHc-CCCEEeeeccccCCCCcCCCCCCHHHHHHHHh
Confidence 8887743 3677889999988 99999999999999999986 99999 6777665566778877777765
No 20
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.23 E-value=1.7e-11 Score=109.24 Aligned_cols=133 Identities=14% Similarity=0.257 Sum_probs=106.4
Q ss_pred CCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCee---cccc-----ccC--HHHHHHHHHcCC
Q 018446 193 LREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL---CKEF-----IVD--AWQIYYARTKGA 262 (355)
Q Consensus 193 I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVL---rKDF-----IId--pyQI~eAr~~GA 262 (355)
+....++.++|+.|+++||.+|++. +.+.++.+|+. +++|++ ++|| +++ ..|+.++..+||
T Consensus 19 ~~~~~~~~~~a~~~~~~Ga~~i~~~--------~~~~i~~i~~~-~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Ga 89 (223)
T 1y0e_A 19 LHSSFIMSKMALAAYEGGAVGIRAN--------TKEDILAIKET-VDLPVIGIVKRDYDHSDVFITATSKEVDELIESQC 89 (223)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEEEE--------SHHHHHHHHHH-CCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTC
T ss_pred CCCCccHHHHHHHHHHCCCeeeccC--------CHHHHHHHHHh-cCCCEEeeeccCCCccccccCCcHHHHHHHHhCCC
Confidence 4444678899999999999999874 68999999996 899997 5663 444 459999999999
Q ss_pred cchHHHHhcCCH--HHHHHHHHHHHHc--CCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCc-------cccChhhHH
Q 018446 263 DAVLLIAAVLPD--LDIRYMTKICKLL--GLTALVEVHDEREMDRVLGIEGIELIGINNRNLET-------FEVDNSNTK 331 (355)
Q Consensus 263 DAVLLIaaiL~~--~~L~~L~~~A~~L--GLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~T-------fevDl~~t~ 331 (355)
|.|.+....+.. ..+.++++.++++ |+.+++++|+.+|+.++... |+++|++++..... ...+++...
T Consensus 90 d~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t~~e~~~~~~~-G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~ 168 (223)
T 1y0e_A 90 EVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIATVEEAKNAARL-GFDYIGTTLHGYTSYTQGQLLYQNDFQFLK 168 (223)
T ss_dssp SEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHT-TCSEEECTTTTSSTTSTTCCTTHHHHHHHH
T ss_pred CEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCCCHHHHHHHHHc-CCCEEEeCCCcCcCCCCCCCCCcccHHHHH
Confidence 999998887643 4678899999999 99999999999999999886 99999998864322 334445555
Q ss_pred hhhc
Q 018446 332 KLLE 335 (355)
Q Consensus 332 ~L~~ 335 (355)
++.+
T Consensus 169 ~~~~ 172 (223)
T 1y0e_A 169 DVLQ 172 (223)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5544
No 21
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=99.20 E-value=5.1e-11 Score=107.74 Aligned_cols=139 Identities=24% Similarity=0.190 Sum_probs=110.5
Q ss_pred CCCCHHHHHHHHHHcCceEEEEeccCC-CCCCCH---HHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHh
Q 018446 195 EDFDPVEIARSYEKGGAACLSILTDEK-YFKGSF---ENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA 270 (355)
Q Consensus 195 ~~~Dp~~iA~~Ye~~GAaaISVLTD~~-fF~GS~---edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaa 270 (355)
...||.++|+.|+++||++|+|. |.. .|.|.. +.++.+++. +++||+...+|.++.|+.++...|||+|++..+
T Consensus 29 ~~~d~~~~a~~~~~~Gad~i~v~-d~~~~~~~~~~~~~~i~~i~~~-~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~ 106 (252)
T 1ka9_F 29 DAGDPVEAARAYDEAGADELVFL-DISATHEERAILLDVVARVAER-VFIPLTVGGGVRSLEDARKLLLSGADKVSVNSA 106 (252)
T ss_dssp STTCHHHHHHHHHHHTCSCEEEE-ECCSSTTCHHHHHHHHHHHHTT-CCSCEEEESSCCSHHHHHHHHHHTCSEEEECHH
T ss_pred ecCCHHHHHHHHHHcCCCEEEEE-cCCccccCccccHHHHHHHHHh-CCCCEEEECCcCCHHHHHHHHHcCCCEEEEChH
Confidence 45699999999999999999887 555 444544 447778875 899999999999999999999999999999988
Q ss_pred cCCH-HHHHHHHHHHH----HcCCcE-------EEEeCC---------HHHHHHHhccCCCeEEEee--CCCCCccccCh
Q 018446 271 VLPD-LDIRYMTKICK----LLGLTA-------LVEVHD---------EREMDRVLGIEGIELIGIN--NRNLETFEVDN 327 (355)
Q Consensus 271 iL~~-~~L~~L~~~A~----~LGLea-------LVEVH~---------~eELerAl~l~ga~iIGIN--NRdL~TfevDl 327 (355)
.+.+ +.+.++.+... .+|+++ .|++|+ .++++++.++ |+..|.++ +||.....+|+
T Consensus 107 ~l~~p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~-G~~~i~~~~~~~~g~~~g~~~ 185 (252)
T 1ka9_F 107 AVRRPELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVEL-GAGEILLTSMDRDGTKEGYDL 185 (252)
T ss_dssp HHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHH-TCCEEEEEETTTTTTCSCCCH
T ss_pred HHhCcHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHc-CCCEEEEecccCCCCcCCCCH
Confidence 8853 34566655542 367776 677775 5667888886 89988888 56777778899
Q ss_pred hhHHhhhcc
Q 018446 328 SNTKKLLEG 336 (355)
Q Consensus 328 ~~t~~L~~~ 336 (355)
+...++.+.
T Consensus 186 ~~i~~l~~~ 194 (252)
T 1ka9_F 186 RLTRMVAEA 194 (252)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 998888764
No 22
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=99.19 E-value=2.5e-11 Score=109.78 Aligned_cols=135 Identities=19% Similarity=0.173 Sum_probs=103.9
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCCCH--HHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHH
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKGSF--ENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDL 275 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~--edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~ 275 (355)
||.++|+.|+++||++|+|.+...+|.|.. +.++.+++. +++|++.+.+|.++.|+.++..+|||+|.+....+.+.
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~~~i~~i~~~-~~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~l~~p 111 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNRALIAEVAQA-MDIKVELSGGIRDDDTLAAALATGCTRVNLGTAALETP 111 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCHHHHHHHHHH-CSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHCH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChHHHHHHHHHh-cCCcEEEECCcCCHHHHHHHHHcCCCEEEECchHhhCH
Confidence 899999999999999999998766776665 558888886 89999999999999999999999999999988887532
Q ss_pred HHHHHHHHHHHcC------CcEE---EEeC-------CHHH-HHHHhccCCCeEEEeeC--CCCCccccChhhHHhhhcc
Q 018446 276 DIRYMTKICKLLG------LTAL---VEVH-------DERE-MDRVLGIEGIELIGINN--RNLETFEVDNSNTKKLLEG 336 (355)
Q Consensus 276 ~L~~L~~~A~~LG------LeaL---VEVH-------~~eE-LerAl~l~ga~iIGINN--RdL~TfevDl~~t~~L~~~ 336 (355)
..+.+..+.+| +++. |++| +..| ++++.++ |++.|.+++ |+.....+|++...++.+.
T Consensus 112 --~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~-G~~~i~~~~~~~~~~~~g~~~~~~~~i~~~ 188 (244)
T 1vzw_A 112 --EWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKE-GCARYVVTDIAKDGTLQGPNLELLKNVCAA 188 (244)
T ss_dssp --HHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHT-TCCCEEEEEC-------CCCHHHHHHHHHT
T ss_pred --HHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhC-CCCEEEEeccCcccccCCCCHHHHHHHHHh
Confidence 23444455544 4443 5566 5555 4778886 999999998 5555566899999998764
No 23
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.98 E-value=8.9e-11 Score=106.33 Aligned_cols=135 Identities=20% Similarity=0.151 Sum_probs=102.3
Q ss_pred CCHHHHHHHHHHcCceEEEEeccCCC----CCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcC
Q 018446 197 FDPVEIARSYEKGGAACLSILTDEKY----FKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVLTD~~f----F~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL 272 (355)
.||.++|+.|+++||++|.| +|... .+-.++.++.++ . +++||+...+|-++.|+.++...|||+|.+..+.|
T Consensus 30 ~~~~~~a~~~~~~Gad~i~v-~d~~~~~~~~~~~~~~i~~i~-~-~~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l 106 (241)
T 1qo2_A 30 KDPVELVEKLIEEGFTLIHV-VDLSNAIENSGENLPVLEKLS-E-FAEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSKVL 106 (241)
T ss_dssp SCHHHHHHHHHHTTCCCEEE-EEHHHHHHCCCTTHHHHHHGG-G-GGGGEEEESSCCSHHHHHHHHHTTCCEEEECHHHH
T ss_pred cCHHHHHHHHHHcCCCEEEE-ecccccccCCchhHHHHHHHH-h-cCCcEEEECCCCCHHHHHHHHHCCCCEEEECchHh
Confidence 58999999999999999998 77543 233466666666 5 78999999999999999999999999999888887
Q ss_pred CHHH-HHHHHHHH---HHcCCcE---EEEeC--------CHHHH-HHHhccCCCeEEEeeCC--CCCccccChhhHHhhh
Q 018446 273 PDLD-IRYMTKIC---KLLGLTA---LVEVH--------DEREM-DRVLGIEGIELIGINNR--NLETFEVDNSNTKKLL 334 (355)
Q Consensus 273 ~~~~-L~~L~~~A---~~LGLea---LVEVH--------~~eEL-erAl~l~ga~iIGINNR--dL~TfevDl~~t~~L~ 334 (355)
.+.+ +.++ +.. ..+|+++ .|++| +..|+ +++.++ |+..|.++++ |-....+|++...++.
T Consensus 107 ~~p~~~~~~-~~~g~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~-G~~~i~~t~~~~~g~~~g~~~~~i~~l~ 184 (241)
T 1qo2_A 107 EDPSFLKSL-REIDVEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEY-GLEEIVHTEIEKDGTLQEHDFSLTKKIA 184 (241)
T ss_dssp HCTTHHHHH-HTTTCEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHTT-TCCEEEEEETTHHHHTCCCCHHHHHHHH
T ss_pred hChHHHHHH-HHcCCcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHhC-CCCEEEEEeecccccCCcCCHHHHHHHH
Confidence 5433 3333 221 1345666 66666 66775 567776 9999999995 4445668898888887
Q ss_pred cc
Q 018446 335 EG 336 (355)
Q Consensus 335 ~~ 336 (355)
+.
T Consensus 185 ~~ 186 (241)
T 1qo2_A 185 IE 186 (241)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 24
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.89 E-value=4.7e-09 Score=93.11 Aligned_cols=125 Identities=13% Similarity=0.047 Sum_probs=95.3
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeec-cccccCHHHHHHHHHcCCcchHHHHhcCCHHH
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLC-KEFIVDAWQIYYARTKGADAVLLIAAVLPDLD 276 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLr-KDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~ 276 (355)
++.++++.|.++|+.+|.+ +++. .+..+.++.+++. .++|++- -.++.+++|+..|..+|||+|. ++. .
T Consensus 20 ~~~~~~~~~~~~G~~~i~l-~~~~--~~~~~~i~~i~~~-~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~-----~~~-~ 89 (212)
T 2v82_A 20 EALAHVGAVIDAGFDAVEI-PLNS--PQWEQSIPAIVDA-YGDKALIGAGTVLKPEQVDALARMGCQLIV-----TPN-I 89 (212)
T ss_dssp HHHHHHHHHHHHTCCEEEE-ETTS--TTHHHHHHHHHHH-HTTTSEEEEECCCSHHHHHHHHHTTCCEEE-----CSS-C
T ss_pred HHHHHHHHHHHCCCCEEEE-eCCC--hhHHHHHHHHHHh-CCCCeEEEeccccCHHHHHHHHHcCCCEEE-----eCC-C
Confidence 5788999999999999998 6554 2345667777663 4556443 3566789999999999999996 222 1
Q ss_pred HHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCccccChhhHHhhhccc
Q 018446 277 IRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLEGE 337 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~TfevDl~~t~~L~~~~ 337 (355)
..++++.++++|+..++++||.+|+.++... |++.|+|+.. ...+++...++.+..
T Consensus 90 ~~~~~~~~~~~g~~~~~g~~t~~e~~~a~~~-G~d~v~v~~t----~~~g~~~~~~l~~~~ 145 (212)
T 2v82_A 90 HSEVIRRAVGYGMTVCPGCATATEAFTALEA-GAQALKIFPS----SAFGPQYIKALKAVL 145 (212)
T ss_dssp CHHHHHHHHHTTCEEECEECSHHHHHHHHHT-TCSEEEETTH----HHHCHHHHHHHHTTS
T ss_pred CHHHHHHHHHcCCCEEeecCCHHHHHHHHHC-CCCEEEEecC----CCCCHHHHHHHHHhc
Confidence 2356789999999999999999999999886 9999999653 245667777776543
No 25
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.80 E-value=2e-08 Score=89.15 Aligned_cols=138 Identities=21% Similarity=0.204 Sum_probs=102.1
Q ss_pred CCCCHHHHHHHHHHcCceEEEEeccCCCCC---CCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhc
Q 018446 195 EDFDPVEIARSYEKGGAACLSILTDEKYFK---GSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (355)
Q Consensus 195 ~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~---GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaai 271 (355)
...++.++++.|+++||++|.|..-...|. ..++.++.+++. +++||+..+.|.++.|+.++..+|||+|.+....
T Consensus 31 ~~~~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~-~~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~~ 109 (253)
T 1h5y_A 31 EVGDPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEA-VSIPVLVGGGVRSLEDATTLFRAGADKVSVNTAA 109 (253)
T ss_dssp EEECHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHH-CSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHH
T ss_pred ecccHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHh-cCCCEEEECCCCCHHHHHHHHHcCCCEEEEChHH
Confidence 345899999999999999999862111111 246778888886 7999999999999999999999999999998877
Q ss_pred CCHHHHHHHHHHHHHcCCcEE--------------EEeC---------CHHHHHHHhccCCCeEEEeeCCCCCcc--ccC
Q 018446 272 LPDLDIRYMTKICKLLGLTAL--------------VEVH---------DEREMDRVLGIEGIELIGINNRNLETF--EVD 326 (355)
Q Consensus 272 L~~~~L~~L~~~A~~LGLeaL--------------VEVH---------~~eELerAl~l~ga~iIGINNRdL~Tf--evD 326 (355)
+.+ ...+.++++.+|++.+ |-+| ..+.++.+.++ |++.|.+++++.... ..|
T Consensus 110 ~~~--~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~-G~d~i~~~~~~~~g~~~~~~ 186 (253)
T 1h5y_A 110 VRN--PQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEEL-GAGEILLTSIDRDGTGLGYD 186 (253)
T ss_dssp HHC--THHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHH-TCSEEEEEETTTTTTCSCCC
T ss_pred hhC--cHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhC-CCCEEEEecccCCCCcCcCC
Confidence 743 2345667777886522 2222 24557777776 999999999987544 346
Q ss_pred hhhHHhhhcc
Q 018446 327 NSNTKKLLEG 336 (355)
Q Consensus 327 l~~t~~L~~~ 336 (355)
++...++.+.
T Consensus 187 ~~~i~~l~~~ 196 (253)
T 1h5y_A 187 VELIRRVADS 196 (253)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 7777777653
No 26
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=98.79 E-value=1.2e-09 Score=102.26 Aligned_cols=112 Identities=18% Similarity=0.134 Sum_probs=89.0
Q ss_pred HHHHHHHHHcCceEE----EEeccCCCCCC-----CHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHh
Q 018446 200 VEIARSYEKGGAACL----SILTDEKYFKG-----SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA 270 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaI----SVLTD~~fF~G-----S~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaa 270 (355)
.++|+.|.++||.+| +|.+|..+|+| +++.++.+|+. +++|++.++.+-+..++..+..+|||+|... .
T Consensus 31 ~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~~-~~~Pvi~~~~~~~~~~~~~~~~aGad~v~~~-~ 108 (297)
T 2zbt_A 31 PEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAA-VSIPVMAKVRIGHFVEAMILEAIGVDFIDES-E 108 (297)
T ss_dssp HHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHTT-CSSCEEEEEETTCHHHHHHHHHTTCSEEEEE-T
T ss_pred HHHHHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHHh-cCCCeEEEeccCCHHHHHHHHHCCCCEEeee-C
Confidence 689999999999999 56788788888 89999999985 8999998766667888888999999999221 1
Q ss_pred cCCHHHHHHHHHHHHH--cCCcEEEEeCCHHHHHHHhccCCCeEEEeeC
Q 018446 271 VLPDLDIRYMTKICKL--LGLTALVEVHDEREMDRVLGIEGIELIGINN 317 (355)
Q Consensus 271 iL~~~~L~~L~~~A~~--LGLeaLVEVH~~eELerAl~l~ga~iIGINN 317 (355)
..+ +.++++.+++ +++..+++|||.+|+.++.+. |+++|++++
T Consensus 109 ~~~---~~~~~~~~~~~~~~i~l~~~v~~~~~~~~a~~~-Gad~I~v~G 153 (297)
T 2zbt_A 109 VLT---PADEEHHIDKWKFKVPFVCGARNLGEALRRIAE-GAAMIRTKG 153 (297)
T ss_dssp TSC---CSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHT-TCSEEEECC
T ss_pred CCC---hHHHHHHHHHhCCCceEEeecCCHHHHHHHHHc-CCCEEEEcc
Confidence 111 1233444443 488888999999999999886 999999985
No 27
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.73 E-value=3.7e-08 Score=86.69 Aligned_cols=135 Identities=15% Similarity=0.169 Sum_probs=102.9
Q ss_pred eEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCC--CCCeeccccccCHHHHH
Q 018446 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGV--KCPLLCKEFIVDAWQIY 255 (355)
Q Consensus 178 aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v--~lPVLrKDFIIdpyQI~ 255 (355)
.+|+=++-.++. +..++++.+.++|+.+|+|.++.. +..+.++.+|+. . +++ +--+.+.++.|+.
T Consensus 11 ~~i~~~~~~~~~--------~~~~~~~~~~~~G~~~iev~~~~~---~~~~~i~~ir~~-~~~~~~-ig~~~v~~~~~~~ 77 (205)
T 1wa3_A 11 KIVAVLRANSVE--------EAKEKALAVFEGGVHLIEITFTVP---DADTVIKELSFL-KEKGAI-IGAGTVTSVEQCR 77 (205)
T ss_dssp CEEEEECCSSHH--------HHHHHHHHHHHTTCCEEEEETTST---THHHHHHHTHHH-HHTTCE-EEEESCCSHHHHH
T ss_pred CEEEEEecCCHH--------HHHHHHHHHHHCCCCEEEEeCCCh---hHHHHHHHHHHH-CCCCcE-EEecccCCHHHHH
Confidence 467767655553 477899999999999999987743 456778888875 2 222 3334567999999
Q ss_pred HHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCccccChhhHHhhhc
Q 018446 256 YARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKLLE 335 (355)
Q Consensus 256 eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~TfevDl~~t~~L~~ 335 (355)
+|...|||.| +...++ .+++++|+++|+..+.++||..|+.+|+++ |+++|.++..+. ..++...++.+
T Consensus 78 ~a~~~Gad~i--v~~~~~----~~~~~~~~~~g~~vi~g~~t~~e~~~a~~~-Gad~vk~~~~~~----~g~~~~~~l~~ 146 (205)
T 1wa3_A 78 KAVESGAEFI--VSPHLD----EEISQFCKEKGVFYMPGVMTPTELVKAMKL-GHTILKLFPGEV----VGPQFVKAMKG 146 (205)
T ss_dssp HHHHHTCSEE--ECSSCC----HHHHHHHHHHTCEEECEECSHHHHHHHHHT-TCCEEEETTHHH----HHHHHHHHHHT
T ss_pred HHHHcCCCEE--EcCCCC----HHHHHHHHHcCCcEECCcCCHHHHHHHHHc-CCCEEEEcCccc----cCHHHHHHHHH
Confidence 9999999999 445555 357899999999999999999999999997 999999987533 23455555554
Q ss_pred c
Q 018446 336 G 336 (355)
Q Consensus 336 ~ 336 (355)
.
T Consensus 147 ~ 147 (205)
T 1wa3_A 147 P 147 (205)
T ss_dssp T
T ss_pred h
Confidence 3
No 28
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=98.70 E-value=5.2e-09 Score=96.20 Aligned_cols=145 Identities=15% Similarity=0.255 Sum_probs=99.5
Q ss_pred ceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccC-------CCCCCCHHHHHHHHhcCCCCCeecccccc
Q 018446 177 PALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDE-------KYFKGSFENLEAVRSAGVKCPLLCKEFIV 249 (355)
Q Consensus 177 ~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~-------~fF~GS~edL~~VR~a~v~lPVLrKDFII 249 (355)
..++.-+.-.- .-|.+....|+..+++.|+++|+++|.+ ++ ++|.|+...+..+.. +. ++ +||+ +
T Consensus 26 ~~~~~~id~~~-~l~p~~~~~~~~~~~~~~~~~g~~~i~~--~~~~~~~~~~~~~~~~~~~v~~~~-~~--~~-~~d~-~ 97 (273)
T 2qjg_A 26 KTVIVPMDHGV-SNGPIKGLIDIRKTVNDVAEGGANAVLL--HKGIVRHGHRGYGKDVGLIIHLSG-GT--AI-SPNP-L 97 (273)
T ss_dssp CEEEEECCHHH-HHCSCTTSSSHHHHHHHHHHHTCSEEEE--CHHHHHSCCCSSSCCCEEEEECEE-CC--TT-SSST-T
T ss_pred CEEEEEccccc-ccCCCcchhhHHHHHHHHHhcCCCEEEe--CHHHHHHHHHhhcCCCCEEEEEcC-CC--cC-CCCc-c
Confidence 35666665411 0223556679999999999999999975 33 223332111111110 11 22 6774 5
Q ss_pred C---HHHHHHHHHcCCcch--HHHHhcCCHH----HHHHHHHHHHHcCCcEEEEe----------CCH---HHH-HHHhc
Q 018446 250 D---AWQIYYARTKGADAV--LLIAAVLPDL----DIRYMTKICKLLGLTALVEV----------HDE---REM-DRVLG 306 (355)
Q Consensus 250 d---pyQI~eAr~~GADAV--LLIaaiL~~~----~L~~L~~~A~~LGLeaLVEV----------H~~---eEL-erAl~ 306 (355)
+ .+|+.+|...|||.| .++...++.+ +++.+.+.|+.+|+..++|+ ++. +|+ +.|.+
T Consensus 98 ~~~~~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~ 177 (273)
T 2qjg_A 98 KKVIVTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAE 177 (273)
T ss_dssp CCEECSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHH
Confidence 5 899999999999999 7777777764 47788899999999999999 555 555 66777
Q ss_pred cCCCeEEEeeCCCCCccccChhhHHhhhcc
Q 018446 307 IEGIELIGINNRNLETFEVDNSNTKKLLEG 336 (355)
Q Consensus 307 l~ga~iIGINNRdL~TfevDl~~t~~L~~~ 336 (355)
+ |+++|++++ ..|++...++.+.
T Consensus 178 ~-Gad~i~~~~------~~~~~~l~~i~~~ 200 (273)
T 2qjg_A 178 L-GADIVKTSY------TGDIDSFRDVVKG 200 (273)
T ss_dssp T-TCSEEEECC------CSSHHHHHHHHHH
T ss_pred c-CCCEEEECC------CCCHHHHHHHHHh
Confidence 5 999999995 3688888887654
No 29
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=98.67 E-value=7.9e-08 Score=92.18 Aligned_cols=124 Identities=19% Similarity=0.249 Sum_probs=95.0
Q ss_pred CCCCCCHHHHHHHHHHcCceEEEEecc----------CCCCCCCHHHHHHHHhcCCCCCeecc--ccccCHHHHHHHHHc
Q 018446 193 LREDFDPVEIARSYEKGGAACLSILTD----------EKYFKGSFENLEAVRSAGVKCPLLCK--EFIVDAWQIYYARTK 260 (355)
Q Consensus 193 I~~~~Dp~~iA~~Ye~~GAaaISVLTD----------~~fF~GS~edL~~VR~a~v~lPVLrK--DFIIdpyQI~eAr~~ 260 (355)
+..++++..+++.++..||++|.|.++ ...|.|.++.+..+|+. +++||+.| +|++++.++..+..+
T Consensus 123 i~~~~~~~~~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~-~~~Pv~vK~~~~~~~~~~a~~a~~~ 201 (349)
T 1p0k_A 123 LGSEATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSR-VSVPVIVKEVGFGMSKASAGKLYEA 201 (349)
T ss_dssp EETTCCHHHHHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHH-CSSCEEEEEESSCCCHHHHHHHHHH
T ss_pred ecCCCCHHHHHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHH-cCCCEEEEecCCCCCHHHHHHHHHc
Confidence 333567888999999999999999987 23555667899999986 89999999 788999999999999
Q ss_pred CCcchHHHH------------hc-------C--CHHHHHHHHHHHHHc-CCcEEEE--eCCHHHHHHHhccCCCeEEEee
Q 018446 261 GADAVLLIA------------AV-------L--PDLDIRYMTKICKLL-GLTALVE--VHDEREMDRVLGIEGIELIGIN 316 (355)
Q Consensus 261 GADAVLLIa------------ai-------L--~~~~L~~L~~~A~~L-GLeaLVE--VH~~eELerAl~l~ga~iIGIN 316 (355)
|||+|.++. .- + .......+.+++..+ ++..+.+ |++.+++.+++.+ ||+.++|-
T Consensus 202 Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~k~l~~-GAd~V~iG 280 (349)
T 1p0k_A 202 GAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIASGGLQDALDVAKAIAL-GASCTGMA 280 (349)
T ss_dssp TCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHT-TCSEEEEC
T ss_pred CCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHc-CCCEEEEc
Confidence 999999952 10 1 111333455555555 6766664 8999999999997 99999986
Q ss_pred CC
Q 018446 317 NR 318 (355)
Q Consensus 317 NR 318 (355)
.-
T Consensus 281 ~~ 282 (349)
T 1p0k_A 281 GH 282 (349)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 30
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.61 E-value=3e-08 Score=90.21 Aligned_cols=138 Identities=17% Similarity=0.096 Sum_probs=72.0
Q ss_pred CCCCHHHHHHHHHHcCceEEEEeccCCCC---CCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhc
Q 018446 195 EDFDPVEIARSYEKGGAACLSILTDEKYF---KGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (355)
Q Consensus 195 ~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF---~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaai 271 (355)
.++|+.++|+.|+++||++|.|..-...+ +-.++.++.+++. +++||+....|-++.++.++...|||+|.+-.+.
T Consensus 33 ~~~~~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~-~~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~ 111 (247)
T 3tdn_A 33 TGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLRGADKVSINTAA 111 (247)
T ss_dssp EEEEHHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGG-CCSCEEEESCCCSHHHHHHHHHTTCSEECCSHHH
T ss_pred CCCCHHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHh-CCCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHH
Confidence 35789999999999999999865322222 2357888999986 8999999999999999999999999999999888
Q ss_pred CCHHHHHHHHHHHHHcCCcEEE------------Ee--CC---------HHHHHHHhccCCCeEEEeeCCCCC--ccccC
Q 018446 272 LPDLDIRYMTKICKLLGLTALV------------EV--HD---------EREMDRVLGIEGIELIGINNRNLE--TFEVD 326 (355)
Q Consensus 272 L~~~~L~~L~~~A~~LGLeaLV------------EV--H~---------~eELerAl~l~ga~iIGINNRdL~--TfevD 326 (355)
|.+.++ +.+.++.+|-+.++ +| |. .+.++++..+ |+..|.+++++.. ....|
T Consensus 112 l~dp~~--~~~~~~~~g~~~iv~~ld~~~~~~~~~v~~~g~~~~~~~~~~~~a~~~~~~-G~~~i~~t~~~~~g~~~g~~ 188 (247)
T 3tdn_A 112 VENPSL--ITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKR-GAGEILLTSIDRDGTKSGYD 188 (247)
T ss_dssp HHCTHH--HHHHHHHHC---------------------------------------------------------------
T ss_pred hhChHH--HHHHHHHhCCCcEEEEEEeccCCCCEEEEECCCcccCCCCHHHHHHHHHhc-CCCEEEEecccCCCCcCCCC
Confidence 854332 34555555533322 22 21 1223444454 8999999997554 23456
Q ss_pred hhhHHhhhcc
Q 018446 327 NSNTKKLLEG 336 (355)
Q Consensus 327 l~~t~~L~~~ 336 (355)
++...++.+.
T Consensus 189 ~~~~~~i~~~ 198 (247)
T 3tdn_A 189 TEMIRFVRPL 198 (247)
T ss_dssp ----------
T ss_pred HHHHHHHHHh
Confidence 6666666543
No 31
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=98.60 E-value=2.8e-08 Score=96.96 Aligned_cols=151 Identities=14% Similarity=0.163 Sum_probs=110.1
Q ss_pred EeEeeecCCCCCCCCC--CCCH---HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeec--cccccCHH
Q 018446 180 IAEVKKASPSRGILRE--DFDP---VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLC--KEFIVDAW 252 (355)
Q Consensus 180 IAEvKRaSPSkG~I~~--~~Dp---~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLr--KDFIIdpy 252 (355)
|.|+++++|..++++- .-|+ .++++.++++|+.+|.|.+|..+|++...++ |. +..+|+.. ++|+-+++
T Consensus 114 ieev~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~---r~-~~~~p~~~~~~~~~~~~~ 189 (370)
T 1gox_A 114 VEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADI---KN-RFVLPPFLTLKNFEGIDL 189 (370)
T ss_dssp HHHHHTTCCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHH---HT-TCCCCTTCCCGGGSSSCC
T ss_pred HHHHHhhcCCCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHH---Hh-ccCCCcccchhhhhhhhh
Confidence 4677777775555541 2233 4678889999999999999999999999887 55 36788765 78887778
Q ss_pred HHHHHHHcCCcchHHHHhcCCHH-HHHHHHHHHHHcCCcEEE-EeCCHHHHHHHhccCCCeEEEeeC---CCCCccccCh
Q 018446 253 QIYYARTKGADAVLLIAAVLPDL-DIRYMTKICKLLGLTALV-EVHDEREMDRVLGIEGIELIGINN---RNLETFEVDN 327 (355)
Q Consensus 253 QI~eAr~~GADAVLLIaaiL~~~-~L~~L~~~A~~LGLeaLV-EVH~~eELerAl~l~ga~iIGINN---RdL~TfevDl 327 (355)
|..+. ..|++...++...+++. .++.+..+++..++..+| ++++.++++++.++ |++.|.|+| |.+.+...++
T Consensus 190 ~~~~~-~~g~~~~~~v~~~~~~~~~~~~i~~l~~~~~~pv~vK~~~~~e~a~~a~~~-Gad~I~vs~~ggr~~~~~~~~~ 267 (370)
T 1gox_A 190 GKMDK-ANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVKGVITAEDARLAVQH-GAAGIIVSNHGARQLDYVPATI 267 (370)
T ss_dssp C----------HHHHHHHTBCTTCCHHHHHHHHHHCCSCEEEECCCSHHHHHHHHHT-TCSEEEECCGGGTSSTTCCCHH
T ss_pred hcccc-ccCccHHHHHHhhcCccchHHHHHHHHHHhCCCEEEEecCCHHHHHHHHHc-CCCEEEECCCCCccCCCcccHH
Confidence 87643 56888777887766554 456677788889999999 99999999999997 999999998 7777766666
Q ss_pred hhHHhhhcc
Q 018446 328 SNTKKLLEG 336 (355)
Q Consensus 328 ~~t~~L~~~ 336 (355)
+...++.+.
T Consensus 268 ~~l~~v~~~ 276 (370)
T 1gox_A 268 MALEEVVKA 276 (370)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666666543
No 32
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.28 E-value=5e-07 Score=79.63 Aligned_cols=131 Identities=11% Similarity=0.149 Sum_probs=94.4
Q ss_pred HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccC---HHHHHHHHHcCCcchHHHHhcCCHHH
Q 018446 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVD---AWQIYYARTKGADAVLLIAAVLPDLD 276 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIId---pyQI~eAr~~GADAVLLIaaiL~~~~ 276 (355)
.++++... +|++.|-+=+ |.++.+.++.++.+|+...++||.+ |+++. .|++.++..+|||+|++.... .++.
T Consensus 16 ~~~~~~~~-~~~diie~G~-p~~~~~g~~~i~~ir~~~~~~~i~~-~~~~~~~~~~~~~~~~~~Gad~v~v~~~~-~~~~ 91 (211)
T 3f4w_A 16 MVFMDKVV-DDVDIIEVGT-PFLIREGVNAIKAIKEKYPHKEVLA-DAKIMDGGHFESQLLFDAGADYVTVLGVT-DVLT 91 (211)
T ss_dssp HHHHHHHG-GGCSEEEECH-HHHHHHTTHHHHHHHHHCTTSEEEE-EEEECSCHHHHHHHHHHTTCSEEEEETTS-CHHH
T ss_pred HHHHHHhh-cCccEEEeCc-HHHHhccHHHHHHHHHhCCCCEEEE-EEEeccchHHHHHHHHhcCCCEEEEeCCC-ChhH
Confidence 35666664 5888877765 3335667899999998535889855 66554 567999999999999997654 3568
Q ss_pred HHHHHHHHHHcCCcEEEEeC---CH-HHHHHHhccCCCeEEEeeCC-CCCcccc-ChhhHHhhhc
Q 018446 277 IRYMTKICKLLGLTALVEVH---DE-REMDRVLGIEGIELIGINNR-NLETFEV-DNSNTKKLLE 335 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH---~~-eELerAl~l~ga~iIGINNR-dL~Tfev-Dl~~t~~L~~ 335 (355)
+.++++.++++|+.+++|+. +. ++++++.+. |+++|++|+- +-.+|.. +++...++.+
T Consensus 92 ~~~~~~~~~~~g~~~~v~~~~~~t~~~~~~~~~~~-g~d~i~v~~g~~g~~~~~~~~~~i~~l~~ 155 (211)
T 3f4w_A 92 IQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEA-GADMLAVHTGTDQQAAGRKPIDDLITMLK 155 (211)
T ss_dssp HHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHH-TCCEEEEECCHHHHHTTCCSHHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHc-CCCEEEEcCCCcccccCCCCHHHHHHHHH
Confidence 89999999999999999964 43 558888886 8999999732 2223322 4455555543
No 33
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=97.84 E-value=0.00017 Score=65.51 Aligned_cols=119 Identities=12% Similarity=0.165 Sum_probs=92.5
Q ss_pred eEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHH
Q 018446 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYA 257 (355)
Q Consensus 178 aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eA 257 (355)
.||+=+..-++. +..++++...++|+.+|=+- +.. .+..+-++.+++. ..-.++.-+.+++..|+..|
T Consensus 17 ~~i~v~r~~~~~--------~~~~~~~al~~gGv~~iel~-~k~--~~~~~~i~~l~~~-~~~~~vgagtvi~~d~~~~A 84 (214)
T 1wbh_A 17 PVVPVIVVKKLE--------HAVPMAKALVAGGVRVLNVT-LRT--ECAVDAIRAIAKE-VPEAIVGAGTVLNPQQLAEV 84 (214)
T ss_dssp SEEEEECCSSGG--------GHHHHHHHHHHTTCCEEEEE-SCS--TTHHHHHHHHHHH-CTTSEEEEESCCSHHHHHHH
T ss_pred CEEEEEECCCHH--------HHHHHHHHHHHcCCCEEEEe-CCC--hhHHHHHHHHHHH-CcCCEEeeCEEEEHHHHHHH
Confidence 477777555553 56789999999999988664 443 3456777777664 32234455678999999999
Q ss_pred HHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEe
Q 018446 258 RTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGI 315 (355)
Q Consensus 258 r~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGI 315 (355)
..+|||.|. ++. .-.+..+.|+.+|+..+.-+||.+|+.+|+.. |++.|++
T Consensus 85 ~~aGAd~v~-----~p~-~d~~v~~~~~~~g~~~i~G~~t~~e~~~A~~~-Gad~v~~ 135 (214)
T 1wbh_A 85 TEAGAQFAI-----SPG-LTEPLLKAATEGTIPLIPGISTVSELMLGMDY-GLKEFKF 135 (214)
T ss_dssp HHHTCSCEE-----ESS-CCHHHHHHHHHSSSCEEEEESSHHHHHHHHHT-TCCEEEE
T ss_pred HHcCCCEEE-----cCC-CCHHHHHHHHHhCCCEEEecCCHHHHHHHHHC-CCCEEEE
Confidence 999999985 332 33467899999999999999999999999996 9999999
No 34
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=97.78 E-value=9.3e-05 Score=64.64 Aligned_cols=121 Identities=18% Similarity=0.144 Sum_probs=82.5
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCCCH----HHHHHHHhc--CCCCCeeccccccCHHHHHHHHHcCCcchHHHHhc
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKGSF----ENLEAVRSA--GVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~----edL~~VR~a--~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaai 271 (355)
++.+.++.+.++||++| .++++. .+. +.++.+++. ...+|++..| ++..+..+|||.|.+-..-
T Consensus 27 ~~~~~~~~~~~~G~~~i-~l~~~~---~~~~~~~~~~~~l~~~~~~~~v~v~v~~------~~~~a~~~gad~v~l~~~~ 96 (215)
T 1xi3_A 27 PEVESVREALEGGATAI-QMRIKN---APTREMYEIGKTLRQLTREYDALFFVDD------RVDVALAVDADGVQLGPED 96 (215)
T ss_dssp CHHHHHHHHHHTTCSEE-EECCCS---CCHHHHHHHHHHHHHHHHHTTCEEEEES------CHHHHHHHTCSEEEECTTS
T ss_pred hHHHHHHHHHHCCCCEE-EECCCC---CCHHHHHHHHHHHHHHHHHcCCeEEEcC------hHHHHHHcCCCEEEECCcc
Confidence 89999999999999999 566543 343 333334331 1356666654 4577889999999776555
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCc------cccChhhHHhhhc
Q 018446 272 LPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLET------FEVDNSNTKKLLE 335 (355)
Q Consensus 272 L~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~T------fevDl~~t~~L~~ 335 (355)
++.+.++.+ . .|+-..+++||.+|+.++... |++.|.+++.. .| ...+++...++.+
T Consensus 97 ~~~~~~~~~----~-~~~~~~v~~~t~~e~~~~~~~-g~d~i~~~~~~-~~~~~~~~~~~~~~~l~~l~~ 159 (215)
T 1xi3_A 97 MPIEVAKEI----A-PNLIIGASVYSLEEALEAEKK-GADYLGAGSVF-PTKTKEDARVIGLEGLRKIVE 159 (215)
T ss_dssp CCHHHHHHH----C-TTSEEEEEESSHHHHHHHHHH-TCSEEEEECSS-CC----CCCCCHHHHHHHHHH
T ss_pred CCHHHHHHh----C-CCCEEEEecCCHHHHHHHHhc-CCCEEEEcCCc-cCCCCCCCCCcCHHHHHHHHH
Confidence 655444443 2 588899999999999998876 99999997642 22 2345555555543
No 35
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=97.68 E-value=0.00029 Score=65.50 Aligned_cols=118 Identities=16% Similarity=0.259 Sum_probs=97.0
Q ss_pred eEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEE-eccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHH
Q 018446 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSI-LTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYY 256 (355)
Q Consensus 178 aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISV-LTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~e 256 (355)
.||+=+.-.+|. +...+|++..++|+.+|=| ++.+ +.++.++.+|+. +.-.++--.-+++.-|...
T Consensus 35 ~vv~Vir~~~~~--------~a~~~a~al~~gGi~~iEvt~~t~----~a~e~I~~l~~~-~~~~~iGaGTVlt~~~a~~ 101 (232)
T 4e38_A 35 KVIPVIAIDNAE--------DIIPLGKVLAENGLPAAEITFRSD----AAVEAIRLLRQA-QPEMLIGAGTILNGEQALA 101 (232)
T ss_dssp CEEEEECCSSGG--------GHHHHHHHHHHTTCCEEEEETTST----THHHHHHHHHHH-CTTCEEEEECCCSHHHHHH
T ss_pred CEEEEEEcCCHH--------HHHHHHHHHHHCCCCEEEEeCCCC----CHHHHHHHHHHh-CCCCEEeECCcCCHHHHHH
Confidence 478777666664 5889999999999999998 3333 467899999885 4345666677899999999
Q ss_pred HHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEe
Q 018446 257 ARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGI 315 (355)
Q Consensus 257 Ar~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGI 315 (355)
|..+|||-|.+- ..-.+++++|++.|+-.+--|.|..|+.+|+++ |+++|++
T Consensus 102 Ai~AGA~fIvsP------~~~~~vi~~~~~~gi~~ipGv~TptEi~~A~~~-Gad~vK~ 153 (232)
T 4e38_A 102 AKEAGATFVVSP------GFNPNTVRACQEIGIDIVPGVNNPSTVEAALEM-GLTTLKF 153 (232)
T ss_dssp HHHHTCSEEECS------SCCHHHHHHHHHHTCEEECEECSHHHHHHHHHT-TCCEEEE
T ss_pred HHHcCCCEEEeC------CCCHHHHHHHHHcCCCEEcCCCCHHHHHHHHHc-CCCEEEE
Confidence 999999998642 233567899999999999999999999999997 9999988
No 36
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.62 E-value=0.00024 Score=65.16 Aligned_cols=119 Identities=18% Similarity=0.290 Sum_probs=89.3
Q ss_pred eEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHH
Q 018446 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYA 257 (355)
Q Consensus 178 aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eA 257 (355)
.||+=+.-.++. +..++++...++|+.+|=+- +.. ....+.++.+++...++- +--+.+++..|+..|
T Consensus 18 ~ii~vir~~~~~--------~~~~~~~al~~gGv~~iel~-~k~--~~~~~~i~~l~~~~~~l~-vgaGtvl~~d~~~~A 85 (224)
T 1vhc_A 18 KIVPVIALDNAD--------DILPLADTLAKNGLSVAEIT-FRS--EAAADAIRLLRANRPDFL-IAAGTVLTAEQVVLA 85 (224)
T ss_dssp CEEEEECCSSGG--------GHHHHHHHHHHTTCCEEEEE-TTS--TTHHHHHHHHHHHCTTCE-EEEESCCSHHHHHHH
T ss_pred CeEEEEeCCCHH--------HHHHHHHHHHHcCCCEEEEe-ccC--chHHHHHHHHHHhCcCcE-EeeCcEeeHHHHHHH
Confidence 366655444443 56789999999999998764 443 244677776766422222 233567799999999
Q ss_pred HHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEe
Q 018446 258 RTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGI 315 (355)
Q Consensus 258 r~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGI 315 (355)
..+|||.|. ++. .-..+++.|+++|+..++-|||.+|+.+|... |++.|++
T Consensus 86 ~~aGAd~v~-----~p~-~d~~v~~~ar~~g~~~i~Gv~t~~e~~~A~~~-Gad~vk~ 136 (224)
T 1vhc_A 86 KSSGADFVV-----TPG-LNPKIVKLCQDLNFPITPGVNNPMAIEIALEM-GISAVKF 136 (224)
T ss_dssp HHHTCSEEE-----CSS-CCHHHHHHHHHTTCCEECEECSHHHHHHHHHT-TCCEEEE
T ss_pred HHCCCCEEE-----ECC-CCHHHHHHHHHhCCCEEeccCCHHHHHHHHHC-CCCEEEE
Confidence 999999993 332 33567889999999999999999999999996 9999999
No 37
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=97.55 E-value=4e-05 Score=71.27 Aligned_cols=125 Identities=18% Similarity=0.105 Sum_probs=80.2
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCC-----CC-CCH-HHHHHH------HhcCCCCCeeccccccCHHHHHHHHHcCCcc
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKY-----FK-GSF-ENLEAV------RSAGVKCPLLCKEFIVDAWQIYYARTKGADA 264 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~f-----F~-GS~-edL~~V------R~a~v~lPVLrKDFIIdpyQI~eAr~~GADA 264 (355)
+..+..+.-.++|+.+|=+- ++.. |+ -+. +.+..+ ++. ...|++-. |.+|+ |+.+|||+
T Consensus 44 ~~~~~~~~al~~Gv~~vqlR-~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~-~~~~liIn----d~~~l--A~~~gAdG 115 (243)
T 3o63_A 44 DLAQFAEAALAGGVDIIQLR-DKGSPGELRFGPLQARDELAACEILADAAHR-YGALFAVN----DRADI--ARAAGADV 115 (243)
T ss_dssp CHHHHHHHHHHTTCSEEEEC-CTTCHHHHHHCSCCHHHHHHHHHHHHHHHHH-TTCEEEEE----SCHHH--HHHHTCSE
T ss_pred hHHHHHHHHHHCCCCEEEEc-cCCCCccccccCCCHHHHHHHHHHHHHHHHh-hCCEEEEe----CHHHH--HHHhCCCE
Confidence 56777777778898886543 4331 11 112 223222 221 34564433 67788 88899999
Q ss_pred hHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCC---CCcc--ccChhhHHhhhc
Q 018446 265 VLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRN---LETF--EVDNSNTKKLLE 335 (355)
Q Consensus 265 VLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRd---L~Tf--evDl~~t~~L~~ 335 (355)
|.|...-|+..+++.++. .++..=+.+||.+|+.+|... |++.||+++.- .++. .++++...++..
T Consensus 116 VHLg~~dl~~~~~r~~~~----~~~~iG~S~ht~~Ea~~A~~~-GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~ 186 (243)
T 3o63_A 116 LHLGQRDLPVNVARQILA----PDTLIGRSTHDPDQVAAAAAG-DADYFCVGPCWPTPTKPGRAAPGLGLVRVAAE 186 (243)
T ss_dssp EEECTTSSCHHHHHHHSC----TTCEEEEEECSHHHHHHHHHS-SCSEEEECCSSCCCC-----CCCHHHHHHHHT
T ss_pred EEecCCcCCHHHHHHhhC----CCCEEEEeCCCHHHHHHHhhC-CCCEEEEcCccCCCCCCCcchhhHHHHHHHHH
Confidence 999999998866665432 244455588999999999986 99999999843 2222 355666666654
No 38
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=97.55 E-value=0.00031 Score=64.49 Aligned_cols=119 Identities=13% Similarity=0.143 Sum_probs=89.4
Q ss_pred eEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHH
Q 018446 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYA 257 (355)
Q Consensus 178 aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eA 257 (355)
.||+=+...++. +..+++++..++|+.+|=+- +.. .+..+.++.+++...++-+- -+.+++..|+..|
T Consensus 27 ~ii~V~r~~~~~--------~~~~~~~al~~gGv~~iel~-~k~--~~~~~~i~~l~~~~~~~~ig-agtvl~~d~~~~A 94 (225)
T 1mxs_A 27 RILPVITIAREE--------DILPLADALAAGGIRTLEVT-LRS--QHGLKAIQVLREQRPELCVG-AGTVLDRSMFAAV 94 (225)
T ss_dssp SEEEEECCSCGG--------GHHHHHHHHHHTTCCEEEEE-SSS--THHHHHHHHHHHHCTTSEEE-EECCCSHHHHHHH
T ss_pred CEEEEEeCCCHH--------HHHHHHHHHHHCCCCEEEEe-cCC--ccHHHHHHHHHHhCcccEEe-eCeEeeHHHHHHH
Confidence 366666544443 57789999999999998764 432 23456666666542233332 3567899999999
Q ss_pred HHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEe
Q 018446 258 RTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGI 315 (355)
Q Consensus 258 r~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGI 315 (355)
..+|||.|. ++. .-..+.+.|+.+|+..+..+||.+|+.+|+.. |++.|++
T Consensus 95 ~~aGAd~v~-----~p~-~d~~v~~~~~~~g~~~i~G~~t~~e~~~A~~~-Gad~vk~ 145 (225)
T 1mxs_A 95 EAAGAQFVV-----TPG-ITEDILEAGVDSEIPLLPGISTPSEIMMGYAL-GYRRFKL 145 (225)
T ss_dssp HHHTCSSEE-----CSS-CCHHHHHHHHHCSSCEECEECSHHHHHHHHTT-TCCEEEE
T ss_pred HHCCCCEEE-----eCC-CCHHHHHHHHHhCCCEEEeeCCHHHHHHHHHC-CCCEEEE
Confidence 999999995 332 33567899999999999999999999999996 9999999
No 39
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=97.43 E-value=0.00074 Score=60.83 Aligned_cols=117 Identities=21% Similarity=0.255 Sum_probs=87.7
Q ss_pred eEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHH
Q 018446 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYA 257 (355)
Q Consensus 178 aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eA 257 (355)
.||+=+...+|. +..++++...++|+.+|=+ |+..- ...+.++.+|+ .++.+- -+.+++..|+..|
T Consensus 14 ~ii~vi~~~~~~--------~~~~~~~~l~~gGv~~iel-~~k~~--~~~~~i~~~~~--~~~~~g-ag~vl~~d~~~~A 79 (207)
T 2yw3_A 14 RLLPLLTVRGGE--------DLLGLARVLEEEGVGALEI-TLRTE--KGLEALKALRK--SGLLLG-AGTVRSPKEAEAA 79 (207)
T ss_dssp CEEEEECCCSCC--------CHHHHHHHHHHTTCCEEEE-ECSST--HHHHHHHHHTT--SSCEEE-EESCCSHHHHHHH
T ss_pred CEEEEEeCCCHH--------HHHHHHHHHHHcCCCEEEE-eCCCh--HHHHHHHHHhC--CCCEEE-eCeEeeHHHHHHH
Confidence 467666554443 5788999999999999975 44321 22455555554 344443 3567799999999
Q ss_pred HHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEe
Q 018446 258 RTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGI 315 (355)
Q Consensus 258 r~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGI 315 (355)
..+|||.|. ++. .-..+.+.++.+|+..+..|||.+|+.+|... |++.|++
T Consensus 80 ~~~GAd~v~-----~~~-~d~~v~~~~~~~g~~~i~G~~t~~e~~~A~~~-Gad~v~~ 130 (207)
T 2yw3_A 80 LEAGAAFLV-----SPG-LLEEVAALAQARGVPYLPGVLTPTEVERALAL-GLSALKF 130 (207)
T ss_dssp HHHTCSEEE-----ESS-CCHHHHHHHHHHTCCEEEEECSHHHHHHHHHT-TCCEEEE
T ss_pred HHcCCCEEE-----cCC-CCHHHHHHHHHhCCCEEecCCCHHHHHHHHHC-CCCEEEE
Confidence 999999985 332 22467899999999999999999999999996 9999999
No 40
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=97.22 E-value=0.00064 Score=65.21 Aligned_cols=127 Identities=9% Similarity=0.069 Sum_probs=97.0
Q ss_pred CHHHHHHHHHHcC--ceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHH---hcC
Q 018446 198 DPVEIARSYEKGG--AACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIA---AVL 272 (355)
Q Consensus 198 Dp~~iA~~Ye~~G--AaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIa---aiL 272 (355)
+..+.++.+.+.| +.+|.+.+-..++...+++++.+|+. ++.|++-|..+.++-+...+..+|||+|.+.- ..+
T Consensus 106 ~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~-~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~hgG~~~ 184 (336)
T 1ypf_A 106 DEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKH-LPESFVIAGNVGTPEAVRELENAGADATKVGIGPGKVC 184 (336)
T ss_dssp HHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHH-CTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTC
T ss_pred HHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHh-CCCCEEEECCcCCHHHHHHHHHcCCCEEEEecCCCcee
Confidence 3456788888999 99998755222333456788999986 66566668889999999999999999998821 011
Q ss_pred --------CHH--HHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhccCCCeEEEeeCCCCCccccC
Q 018446 273 --------PDL--DIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNLETFEVD 326 (355)
Q Consensus 273 --------~~~--~L~~L~~~A~~LGLeaLV--EVH~~eELerAl~l~ga~iIGINNRdL~TfevD 326 (355)
... .+..+.+.+...++..+. -|++..|+.+|+.+ ||+.++|-..-|.|.|-.
T Consensus 185 ~~~~~~~~g~~g~~~~~l~~v~~~~~ipVIa~GGI~~g~Dv~kalal-GAdaV~iGr~~l~t~Es~ 249 (336)
T 1ypf_A 185 ITKIKTGFGTGGWQLAALRWCAKAASKPIIADGGIRTNGDVAKSIRF-GATMVMIGSLFAGHEESP 249 (336)
T ss_dssp HHHHHHSCSSTTCHHHHHHHHHHTCSSCEEEESCCCSTHHHHHHHHT-TCSEEEESGGGTTCTTSS
T ss_pred ecccccCcCCchhHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHc-CCCEEEeChhhhccccCC
Confidence 101 466777888888999999 89999999999997 999999999988765543
No 41
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.14 E-value=0.0012 Score=66.59 Aligned_cols=128 Identities=16% Similarity=0.106 Sum_probs=98.8
Q ss_pred CCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHH------HHh
Q 018446 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLL------IAA 270 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLL------Iaa 270 (355)
-|..+.++.+.++||++|.+-|-..+..+..+.++.+|+...++||+..+ +.++-+...+..+|||+|.+ +..
T Consensus 228 ~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~-v~t~e~a~~l~~aGaD~I~vg~g~Gs~~~ 306 (490)
T 4avf_A 228 ADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGN-IATAEAAKALAEAGADAVKVGIGPGSICT 306 (490)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEE-ECSHHHHHHHHHTTCSEEEECSSCSTTCH
T ss_pred cchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEee-eCcHHHHHHHHHcCCCEEEECCCCCcCCC
Confidence 46788999999999999999988777777789999999862378999864 67888999999999999985 211
Q ss_pred -----cCCHHH---HHHHHHHHHHcCCcEEE--EeCCHHHHHHHhccCCCeEEEeeCCCCCccccC
Q 018446 271 -----VLPDLD---IRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNLETFEVD 326 (355)
Q Consensus 271 -----iL~~~~---L~~L~~~A~~LGLeaLV--EVH~~eELerAl~l~ga~iIGINNRdL~TfevD 326 (355)
-.+..+ +.++.+.++..++..+. =|.+.+++.+|+.+ ||+.++|-..=+.|-|-.
T Consensus 307 t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~-GAd~V~vGs~~~~~~Esp 371 (490)
T 4avf_A 307 TRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVA-GAYCVMMGSMFAGTEEAP 371 (490)
T ss_dssp HHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHH-TCSEEEECTTTTTBTTSS
T ss_pred ccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHc-CCCeeeecHHHhcCCCCC
Confidence 111113 34445555566888888 59999999999997 999999987766665533
No 42
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=96.99 E-value=0.0027 Score=63.40 Aligned_cols=118 Identities=17% Similarity=0.229 Sum_probs=90.5
Q ss_pred CCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCC-CCCeeccccccCHHHHHHHHHcCCcchHHH-------
Q 018446 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLI------- 268 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v-~lPVLrKDFIIdpyQI~eAr~~GADAVLLI------- 268 (355)
.+..+.+..+.++|+++|.+-+...++.+.++.+..+|+. + ++||+.+ .+.++-+...+..+|||+|.+-
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~-~p~~pvi~g-~~~t~e~a~~l~~~G~d~I~v~~~~G~~~ 313 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKAD-YPDLPVVAG-NVATPEGTEALIKAGADAVKVGVGPGSIC 313 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH-CTTSCEEEE-EECSHHHHHHHHHTTCSEEEECSSCSTTC
T ss_pred HhHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHH-CCCceEEeC-CcCCHHHHHHHHHcCCCEEEEcCCCCccc
Confidence 4567889999999999999977655566678899999986 5 7999886 5788888899999999999761
Q ss_pred -----Hhc-CCH-HHHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhccCCCeEEEeeC
Q 018446 269 -----AAV-LPD-LDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINN 317 (355)
Q Consensus 269 -----aai-L~~-~~L~~L~~~A~~LGLeaLV--EVH~~eELerAl~l~ga~iIGINN 317 (355)
... .+. ..+.++.+.+...++..+. -|++..++.+++.+ ||+.+++-.
T Consensus 314 ~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~-GAd~V~iGr 370 (494)
T 1vrd_A 314 TTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAA-GAESVMVGS 370 (494)
T ss_dssp HHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHT-TCSEEEESH
T ss_pred cccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHc-CCCEEEECH
Confidence 111 222 2234444555557898888 89999999999997 999999643
No 43
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=96.96 E-value=0.0035 Score=57.90 Aligned_cols=119 Identities=18% Similarity=0.178 Sum_probs=97.0
Q ss_pred eEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHH
Q 018446 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYA 257 (355)
Q Consensus 178 aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eA 257 (355)
.||+=+.-.+|. +...+|++..++|+.+|=|--.. .+.++.++.+++. ..-+++==.-++++-|..+|
T Consensus 14 ~vi~Vir~~~~~--------~a~~~a~al~~gGi~~iEvt~~t---~~a~~~I~~l~~~-~p~~~IGAGTVlt~~~a~~a 81 (217)
T 3lab_A 14 PLIPVIVIDDLV--------HAIPMAKALVAGGVHLLEVTLRT---EAGLAAISAIKKA-VPEAIVGAGTVCTADDFQKA 81 (217)
T ss_dssp SEEEEECCSCGG--------GHHHHHHHHHHTTCCEEEEETTS---TTHHHHHHHHHHH-CTTSEEEEECCCSHHHHHHH
T ss_pred CEEEEEEcCCHH--------HHHHHHHHHHHcCCCEEEEeCCC---ccHHHHHHHHHHH-CCCCeEeeccccCHHHHHHH
Confidence 577766555553 57899999999999999983222 3678999999986 55567777888999999999
Q ss_pred HHcCCcchHHHHhcCCHHHHHHHHHHHHHcCC------cEEEEeCCHHHHHHHhccCCCeEEEe
Q 018446 258 RTKGADAVLLIAAVLPDLDIRYMTKICKLLGL------TALVEVHDEREMDRVLGIEGIELIGI 315 (355)
Q Consensus 258 r~~GADAVLLIaaiL~~~~L~~L~~~A~~LGL------eaLVEVH~~eELerAl~l~ga~iIGI 315 (355)
..+||+-|+-- -+ ..+++++|++.|+ -.+=-|.|..|+.+|+++ |+++|.+
T Consensus 82 i~AGA~fivsP--~~----~~evi~~~~~~~v~~~~~~~~~PG~~TptE~~~A~~~-Gad~vK~ 138 (217)
T 3lab_A 82 IDAGAQFIVSP--GL----TPELIEKAKQVKLDGQWQGVFLPGVATASEVMIAAQA-GITQLKC 138 (217)
T ss_dssp HHHTCSEEEES--SC----CHHHHHHHHHHHHHCSCCCEEEEEECSHHHHHHHHHT-TCCEEEE
T ss_pred HHcCCCEEEeC--CC----cHHHHHHHHHcCCCccCCCeEeCCCCCHHHHHHHHHc-CCCEEEE
Confidence 99999987542 13 3478999999999 999999999999999997 9999965
No 44
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=96.94 E-value=0.0027 Score=64.32 Aligned_cols=128 Identities=14% Similarity=0.139 Sum_probs=100.0
Q ss_pred CCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHH------HH-
Q 018446 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLL------IA- 269 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLL------Ia- 269 (355)
-|..+.|+.+.++||++|.+-+-..++.+-++.++.+|+...++||+.. .+.+.-+...+..+|||+|.+ +.
T Consensus 230 ~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g-~v~t~e~a~~l~~aGaD~I~Vg~g~Gs~~~ 308 (496)
T 4fxs_A 230 PGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGG-NVATAEGARALIEAGVSAVKVGIGPGSICT 308 (496)
T ss_dssp SCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEE-EECSHHHHHHHHHHTCSEEEECSSCCTTBC
T ss_pred cchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEEc-ccCcHHHHHHHHHhCCCEEEECCCCCcCcc
Confidence 4567889999999999999998876677778999999986337899884 467888999999999999974 11
Q ss_pred ----hcC--C-HHHHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhccCCCeEEEeeCCCCCccccC
Q 018446 270 ----AVL--P-DLDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNLETFEVD 326 (355)
Q Consensus 270 ----aiL--~-~~~L~~L~~~A~~LGLeaLV--EVH~~eELerAl~l~ga~iIGINNRdL~TfevD 326 (355)
.-. + ...+.++.+.++..|+-.+. =|.+.+++.+|+.+ ||+.++|-.+=+.|.|-.
T Consensus 309 tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~-GAd~V~iGs~f~~t~Esp 373 (496)
T 4fxs_A 309 TRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAA-GASCVMVGSMFAGTEEAP 373 (496)
T ss_dssp HHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHT-TCSEEEESTTTTTBTTSS
T ss_pred cccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHc-CCCeEEecHHHhcCCCCC
Confidence 111 1 12345566666678988888 49999999999997 999999988877776644
No 45
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=96.93 E-value=0.0042 Score=62.43 Aligned_cols=125 Identities=10% Similarity=0.072 Sum_probs=95.6
Q ss_pred CCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCC-CCCeeccccccCHHHHHHHHHcCCcchHHHH------
Q 018446 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIA------ 269 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v-~lPVLrKDFIIdpyQI~eAr~~GADAVLLIa------ 269 (355)
.+..+.++.+.++|+++|.+.+-..+-.+.++.++.+|+. + ++||+.|+. .+.-+...+..+|||+|.+-.
T Consensus 254 ~~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~-~~~~pvi~~~v-~t~~~a~~l~~aGad~I~vg~~~G~~~ 331 (514)
T 1jcn_A 254 EDDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQK-YPHLQVIGGNV-VTAAQAKNLIDAGVDGLRVGMGCGSIC 331 (514)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHH-CTTCEEEEEEE-CSHHHHHHHHHHTCSEEEECSSCSCCB
T ss_pred hhhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHh-CCCCceEeccc-chHHHHHHHHHcCCCEEEECCCCCccc
Confidence 4567888899999999999977532222235788999986 6 899998875 678888899999999997711
Q ss_pred --------hcCCHHHHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhccCCCeEEEeeCCCCCccc
Q 018446 270 --------AVLPDLDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNLETFE 324 (355)
Q Consensus 270 --------aiL~~~~L~~L~~~A~~LGLeaLV--EVH~~eELerAl~l~ga~iIGINNRdL~Tfe 324 (355)
.......+..+.+++...++..+. -|.+..++.+++.+ ||+.++|-..=+.+-+
T Consensus 332 ~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~kala~-GAd~V~iG~~~l~~~e 395 (514)
T 1jcn_A 332 ITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALAL-GASTVMMGSLLAATTE 395 (514)
T ss_dssp TTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHT-TCSEEEESTTTTTSTT
T ss_pred ccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHHHHHc-CCCeeeECHHHHcCCc
Confidence 011133456666777888988887 89999999999997 9999999887766543
No 46
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=96.85 E-value=0.0037 Score=63.52 Aligned_cols=128 Identities=15% Similarity=0.176 Sum_probs=100.2
Q ss_pred CCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHH------H--
Q 018446 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLL------I-- 268 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLL------I-- 268 (355)
.|..+.++.+.++|+++|.|-+...++.|-++.++.+|+...++||+.++. .+.-+...+..+|||+|.+ |
T Consensus 255 ~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v-~t~e~a~~~~~aGad~i~vg~g~gsi~~ 333 (511)
T 3usb_A 255 ADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNV-ATAEATKALIEAGANVVKVGIGPGSICT 333 (511)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEE-CSHHHHHHHHHHTCSEEEECSSCSTTCC
T ss_pred cchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeee-ccHHHHHHHHHhCCCEEEECCCCccccc
Confidence 356788889999999999999988778888889999998634689999884 5788888999999999974 1
Q ss_pred ----Hhc-CCH-HHHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhccCCCeEEEeeCCCCCccccC
Q 018446 269 ----AAV-LPD-LDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNLETFEVD 326 (355)
Q Consensus 269 ----aai-L~~-~~L~~L~~~A~~LGLeaLV--EVH~~eELerAl~l~ga~iIGINNRdL~TfevD 326 (355)
..+ .+. ..+.++.+.+..+|+..+. -|.+..++.+|+.+ ||+.++|-..=+.|-+-.
T Consensus 334 ~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala~-GA~~V~vGs~~~~~~es~ 398 (511)
T 3usb_A 334 TRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKALAA-GAHVVMLGSMFAGVAESP 398 (511)
T ss_dssp HHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHT-TCSEEEESTTTTTBTTSS
T ss_pred cccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHh-CchhheecHHHhcCccCc
Confidence 111 221 2344556677888988777 79999999999997 999999988766666543
No 47
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=96.82 E-value=0.0015 Score=58.74 Aligned_cols=128 Identities=16% Similarity=0.244 Sum_probs=90.2
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEe---ccCCCCCC---------------C----HHHHHH
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSIL---TDEKYFKG---------------S----FENLEA 232 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVL---TD~~fF~G---------------S----~edL~~ 232 (355)
++..+|+=+-...|+. -+..+.++.++++ |+.|-+- +||. ..| + ++.++.
T Consensus 3 ~~~~~~~~i~~~~~~~------~~~~~~a~~~~~~-ad~iel~~p~sdp~-~DG~~~~~~~~~al~~g~~~~~~~~~i~~ 74 (248)
T 1geq_A 3 KDGSLIPYLTAGDPDK------QSTLNFLLALDEY-AGAIELGIPFSDPI-ADGKTIQESHYRALKNGFKLREAFWIVKE 74 (248)
T ss_dssp CTTEEEEEEETTSSCH------HHHHHHHHHHGGG-BSCEEEECCCSCCT-TSCHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred CCccEEEEEeCCCCCH------HHHHHHHHHHHHc-CCEEEECCCCCCCC-CCCHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 3456777776666642 1356889999999 9999988 4443 333 2 678888
Q ss_pred HHhcCCCCCeeccccccCH-------HHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeC--CHHHHHH
Q 018446 233 VRSAGVKCPLLCKEFIVDA-------WQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH--DEREMDR 303 (355)
Q Consensus 233 VR~a~v~lPVLrKDFIIdp-------yQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH--~~eELer 303 (355)
+|+. +++||..... +++ ..+..+..+|||.|.+- .++.++...+++.++++|+..++=+. |..|.-+
T Consensus 75 i~~~-~~~pv~~~~~-~~~~~~~~~~~~~~~~~~~Gad~v~~~--~~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~ 150 (248)
T 1geq_A 75 FRRH-SSTPIVLMTY-YNPIYRAGVRNFLAEAKASGVDGILVV--DLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLK 150 (248)
T ss_dssp HHTT-CCCCEEEEEC-HHHHHHHCHHHHHHHHHHHTCCEEEET--TCCGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHH
T ss_pred HHhh-CCCCEEEEec-cchhhhcCHHHHHHHHHHCCCCEEEEC--CCChhhHHHHHHHHHHhCCCeEEEECCCCHHHHHH
Confidence 8885 7899775432 243 68888999999999885 45556889999999999999887764 5555555
Q ss_pred HhccCCCe-EEEe
Q 018446 304 VLGIEGIE-LIGI 315 (355)
Q Consensus 304 Al~l~ga~-iIGI 315 (355)
++.. +++ +|.+
T Consensus 151 ~~~~-~~d~~i~~ 162 (248)
T 1geq_A 151 VIDD-MTTGFVYL 162 (248)
T ss_dssp HHHH-HCSSEEEE
T ss_pred HHHh-cCCCeEEE
Confidence 4442 344 5544
No 48
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=96.80 E-value=0.0049 Score=59.89 Aligned_cols=124 Identities=15% Similarity=0.171 Sum_probs=89.5
Q ss_pred CHHHHHHHHHHcCceEEEEeccC---CCCC--CCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHh--
Q 018446 198 DPVEIARSYEKGGAACLSILTDE---KYFK--GSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA-- 270 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~---~fF~--GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaa-- 270 (355)
+..+.++.+.+.||++|.+-..+ .|++ +.++++..+|+. +++||+.|+ |.++-+...+..+|||+|.+-..
T Consensus 166 ~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~-~~~pvi~gg-i~t~e~a~~~~~~Gad~i~vg~Gg~ 243 (393)
T 2qr6_A 166 NVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGS-LDVPVIAGG-VNDYTTALHMMRTGAVGIIVGGGEN 243 (393)
T ss_dssp THHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHH-CSSCEEEEC-CCSHHHHHHHHTTTCSEEEESCCSC
T ss_pred cHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHh-cCCCEEECC-cCCHHHHHHHHHcCCCEEEECCCcc
Confidence 56788999989999999774332 2443 367889999986 899999985 67888999999999999988320
Q ss_pred ------cCCHHHHHHHHHHHHH-------cC---CcEEE--EeCCHHHHHHHhccCCCeEEEeeCCCCCccc
Q 018446 271 ------VLPDLDIRYMTKICKL-------LG---LTALV--EVHDEREMDRVLGIEGIELIGINNRNLETFE 324 (355)
Q Consensus 271 ------iL~~~~L~~L~~~A~~-------LG---LeaLV--EVH~~eELerAl~l~ga~iIGINNRdL~Tfe 324 (355)
-.+...+..+.+.+.. +| +..+. -|++..++.+++.+ ||+.++|-..-+.+.+
T Consensus 244 ~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kalal-GA~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 244 TNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKAIAC-GADAVVLGSPLARAEE 314 (393)
T ss_dssp CHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHHH-TCSEEEECGGGGGSTT
T ss_pred cccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHHc-CCCEEEECHHHHcCCC
Confidence 0112244445444443 56 66665 49999999999998 9999999888776665
No 49
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=96.70 E-value=0.011 Score=57.88 Aligned_cols=122 Identities=10% Similarity=0.120 Sum_probs=85.7
Q ss_pred CCHHHHHHHHHHcCceEEEEec---------c-CCCCC-CCHHHHHHHHhcCCCCCeeccc--cccCHHHHHHHHHcCCc
Q 018446 197 FDPVEIARSYEKGGAACLSILT---------D-EKYFK-GSFENLEAVRSAGVKCPLLCKE--FIVDAWQIYYARTKGAD 263 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVLT---------D-~~fF~-GS~edL~~VR~a~v~lPVLrKD--FIIdpyQI~eAr~~GAD 263 (355)
+++..+.++.+..+|.|+-|-. + ..-|. |..+.++.+|+. +++||+.|- +.+++.....+..+|||
T Consensus 135 ~~~~~~~~av~~~~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~-~~vPVivK~vG~g~s~~~A~~l~~aGad 213 (368)
T 3vkj_A 135 YGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKE-LSVPIIVKESGNGISMETAKLLYSYGIK 213 (368)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTT-CSSCEEEECSSSCCCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHhcCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHHHHhCCCC
Confidence 5677666656555555555532 1 23344 789999999985 899999995 44899999999999999
Q ss_pred chHHHHh------------c-------------C---CHHHHHHHHHHHHHcC-CcEEE--EeCCHHHHHHHhccCCCeE
Q 018446 264 AVLLIAA------------V-------------L---PDLDIRYMTKICKLLG-LTALV--EVHDEREMDRVLGIEGIEL 312 (355)
Q Consensus 264 AVLLIaa------------i-------------L---~~~~L~~L~~~A~~LG-LeaLV--EVH~~eELerAl~l~ga~i 312 (355)
+|.+.-. . + +......+...+..++ +..+. -|+|..++.+++.+ ||+.
T Consensus 214 ~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~~ipvia~GGI~~~~d~~kal~l-GA~~ 292 (368)
T 3vkj_A 214 NFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIAL-GADI 292 (368)
T ss_dssp EEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHSTTCEEEEESSCCSHHHHHHHHHH-TCSE
T ss_pred EEEEeCCCCCcccchhhhhcccccccchhhccccccccccHHHHHHHHHHHcCCCcEEEECCCCCHHHHHHHHHc-CCCE
Confidence 9976321 0 0 1112234556666664 65555 48999999999998 9999
Q ss_pred EEeeCCCC
Q 018446 313 IGINNRNL 320 (355)
Q Consensus 313 IGINNRdL 320 (355)
++|-..-|
T Consensus 293 v~ig~~~l 300 (368)
T 3vkj_A 293 AGMALPVL 300 (368)
T ss_dssp EEECHHHH
T ss_pred EEEcHHHH
Confidence 99976444
No 50
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=96.61 E-value=0.0069 Score=58.80 Aligned_cols=122 Identities=11% Similarity=0.100 Sum_probs=88.7
Q ss_pred HHHHHHHHc--CceEEEEeccCCCCCCCHHHHHHHHhcCC-CCCeeccccccCHHHHHHHHHcCCcchHHHH--------
Q 018446 201 EIARSYEKG--GAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIA-------- 269 (355)
Q Consensus 201 ~iA~~Ye~~--GAaaISVLTD~~fF~GS~edL~~VR~a~v-~lPVLrKDFIIdpyQI~eAr~~GADAVLLIa-------- 269 (355)
+.++...+. |+.++++-+...+..+.+++++.+|+. . ++||+.++ +.++-+...|..+|||+|.+-.
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~-~~~~~vi~g~-v~t~e~A~~a~~aGaD~I~v~~g~G~~~~~ 198 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKR-FPQHTIMAGN-VVTGEMVEELILSGADIIKVGIGPGSVCTT 198 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHH-CTTSEEEEEE-ECSHHHHHHHHHTTCSEEEECSSCSTTBCH
T ss_pred HHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHh-cCCCeEEEEe-CCCHHHHHHHHHhCCCEEEECCCCCcCcCc
Confidence 455555555 899998755322222345678888886 5 79999885 6788999999999999994411
Q ss_pred ----h-cCCH-HHHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhccCCCeEEEeeCCCCCcccc
Q 018446 270 ----A-VLPD-LDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNLETFEV 325 (355)
Q Consensus 270 ----a-iL~~-~~L~~L~~~A~~LGLeaLV--EVH~~eELerAl~l~ga~iIGINNRdL~Tfev 325 (355)
. -.+. .-|.++.+.+...++..+. =+.|..|+.+|+.+ ||+.++|=.+=|.+-|.
T Consensus 199 r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlal-GA~~V~vG~~fl~~~Es 261 (351)
T 2c6q_A 199 RKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGA-GADFVMLGGMLAGHSES 261 (351)
T ss_dssp HHHHCBCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHT-TCSEEEESTTTTTBTTS
T ss_pred cccCCCCccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHc-CCCceeccHHHhcCccC
Confidence 0 0111 2345556667778998888 89999999999998 99999999988876443
No 51
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=96.40 E-value=0.0047 Score=54.83 Aligned_cols=101 Identities=13% Similarity=0.044 Sum_probs=70.6
Q ss_pred HHHHHHcCceEEEEeccCCCCCCCHHH----HHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHH
Q 018446 203 ARSYEKGGAACLSILTDEKYFKGSFEN----LEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIR 278 (355)
Q Consensus 203 A~~Ye~~GAaaISVLTD~~fF~GS~ed----L~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~ 278 (355)
+....++|++.+-+ +.+. .+.+. ++.+++. ..|.. .|+++. ++..+..+|||+|.|....++.+.++
T Consensus 35 ~~~~~~~G~~~v~l--r~~~--~~~~~~~~~~~~l~~~--~~~~~--~l~v~~-~~~~a~~~gad~v~l~~~~~~~~~~~ 105 (221)
T 1yad_A 35 IIITIQNEVDFIHI--RERS--KSAADILKLLDLIFEG--GIDKR--KLVMNG-RVDIALFSTIHRVQLPSGSFSPKQIR 105 (221)
T ss_dssp HHHHHGGGCSEEEE--CCTT--SCHHHHHHHHHHHHHT--TCCGG--GEEEES-CHHHHHTTTCCEEEECTTSCCHHHHH
T ss_pred HHHHHHCCCCEEEE--ccCC--CCHHHHHHHHHHHHHh--cCcCC--eEEEeC-hHHHHHHcCCCEEEeCCCccCHHHHH
Confidence 44556789997643 3332 34443 3344442 23422 677774 67889999999999987766655554
Q ss_pred HHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCC
Q 018446 279 YMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNR 318 (355)
Q Consensus 279 ~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNR 318 (355)
.+. . |+..-+.|||.+|+.++... |++.|++.+-
T Consensus 106 ~~~----~-~~~ig~sv~t~~~~~~a~~~-gaD~i~~~~~ 139 (221)
T 1yad_A 106 ARF----P-HLHIGRSVHSLEEAVQAEKE-DADYVLFGHV 139 (221)
T ss_dssp HHC----T-TCEEEEEECSHHHHHHHHHT-TCSEEEEECC
T ss_pred HHC----C-CCEEEEEcCCHHHHHHHHhC-CCCEEEECCc
Confidence 432 2 89999999999999999986 9999999874
No 52
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=96.37 E-value=0.0099 Score=59.06 Aligned_cols=122 Identities=19% Similarity=0.164 Sum_probs=93.1
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCC-CCCeeccccccCHHHHHHHHHcCCcchHHH--------
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLI-------- 268 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v-~lPVLrKDFIIdpyQI~eAr~~GADAVLLI-------- 268 (355)
+..+.|+.+.++|+++|.+-+-..+|.+.++.+..+++. + ++|++.+ .+.+.-....+..+|||+|.+-
T Consensus 233 ~~~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~-~p~~pvi~G-~v~t~~~a~~~~~~Gad~I~vg~g~g~~~~ 310 (491)
T 1zfj_A 233 DTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAH-FPNRTLIAG-NIATAEGARALYDAGVDVVKVGIGPGSICT 310 (491)
T ss_dssp THHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHH-CSSSCEEEE-EECSHHHHHHHHHTTCSEEEECSSCCTTBC
T ss_pred hHHHHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHH-CCCCcEeCC-CccCHHHHHHHHHcCCCEEEECccCCcceE
Confidence 456788999999999999888666777777888899886 5 8999965 5567888889999999998431
Q ss_pred ---Hh---cCCHHHHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhccCCCeEEEeeCCCCCc
Q 018446 269 ---AA---VLPDLDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNLET 322 (355)
Q Consensus 269 ---aa---iL~~~~L~~L~~~A~~LGLeaLV--EVH~~eELerAl~l~ga~iIGINNRdL~T 322 (355)
.. .-..+.+.++...+...++..+. -|++..++.+|+.+ ||+.+++-..=+.+
T Consensus 311 tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal~~-GA~~v~vG~~~~~~ 371 (491)
T 1zfj_A 311 TRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAA-GGNAVMLGSMFAGT 371 (491)
T ss_dssp HHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHT-TCSEEEESTTTTTB
T ss_pred EeeecCCCCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHHHc-CCcceeeCHHhhCC
Confidence 10 11123455566666678888887 68999999999997 99999996555443
No 53
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=96.35 E-value=0.0085 Score=53.71 Aligned_cols=92 Identities=18% Similarity=0.071 Sum_probs=75.0
Q ss_pred CCHHHHHHHHHHcCceEEEEe---ccCCCCCCCHHHHHHHHhcCCCCCeeccccccC-HHHHHHHHHcCCcchHHHHhcC
Q 018446 197 FDPVEIARSYEKGGAACLSIL---TDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVD-AWQIYYARTKGADAVLLIAAVL 272 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVL---TD~~fF~GS~edL~~VR~a~v~lPVLrKDFIId-pyQI~eAr~~GADAVLLIaaiL 272 (355)
.++.+.++.+++.||..|-+. .|..+++=+++.++.+++. +++||+.- +.|. +-++.+....|||+|+..-+++
T Consensus 152 ~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~-~~ipvia~-GGI~~~~d~~~~~~~Gadgv~vgsal~ 229 (252)
T 1ka9_F 152 LHAVEWAVKGVELGAGEILLTSMDRDGTKEGYDLRLTRMVAEA-VGVPVIAS-GGAGRMEHFLEAFQAGAEAALAASVFH 229 (252)
T ss_dssp EEHHHHHHHHHHHTCCEEEEEETTTTTTCSCCCHHHHHHHHHH-CSSCEEEE-SCCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred CcHHHHHHHHHHcCCCEEEEecccCCCCcCCCCHHHHHHHHHH-cCCCEEEe-CCCCCHHHHHHHHHCCCHHHHHHHHHH
Confidence 467899999999999988775 2444554479999999986 89999986 5555 7999999999999999988888
Q ss_pred CHH-HHHHHHHHHHHcCCc
Q 018446 273 PDL-DIRYMTKICKLLGLT 290 (355)
Q Consensus 273 ~~~-~L~~L~~~A~~LGLe 290 (355)
... .++++.+++.+-|+.
T Consensus 230 ~~~~~~~~~~~~l~~~~~~ 248 (252)
T 1ka9_F 230 FGEIPIPKLKRYLAEKGVH 248 (252)
T ss_dssp TTSSCHHHHHHHHHHTTCC
T ss_pred cCCCCHHHHHHHHHHCCCC
Confidence 765 788888888888874
No 54
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=96.32 E-value=0.014 Score=51.36 Aligned_cols=123 Identities=15% Similarity=0.157 Sum_probs=75.5
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCH----HHHHHHHhc--CCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcC
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSF----ENLEAVRSA--GVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~----edL~~VR~a--~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL 272 (355)
+.+.++...++|+++|-+- ++..-...+ +.+..+++. ...+||+-.|+ +..|..+|||.|.| ...
T Consensus 33 ~~~~~~~~~~~G~~~i~l~-~~~~~~~~~~~~~~~~~~l~~~~~~~~v~v~v~~~------~~~a~~~gad~v~l--~~~ 103 (227)
T 2tps_A 33 PVTVVQKALKGGATLYQFR-EKGGDALTGEARIKFAEKAQAACREAGVPFIVNDD------VELALNLKADGIHI--GQE 103 (227)
T ss_dssp HHHHHHHHHHHTCSEEEEC-CCSTTCCCHHHHHHHHHHHHHHHHHHTCCEEEESC------HHHHHHHTCSEEEE--CTT
T ss_pred HHHHHHHHHHCCCCEEEEe-cCCCCHhHHHHHHHHHHHHHHHHHHcCCeEEEcCH------HHHHHHcCCCEEEE--CCC
Confidence 8899999999999998654 322111222 333333321 13578877654 46788999999976 222
Q ss_pred CHHHHHHHHHHHHHcCCcEEEE--eCCHHHHHHHhccCCCeEEEe---eCCCCC---ccccChhhHHhhhcc
Q 018446 273 PDLDIRYMTKICKLLGLTALVE--VHDEREMDRVLGIEGIELIGI---NNRNLE---TFEVDNSNTKKLLEG 336 (355)
Q Consensus 273 ~~~~L~~L~~~A~~LGLeaLVE--VH~~eELerAl~l~ga~iIGI---NNRdL~---TfevDl~~t~~L~~~ 336 (355)
+. . +.++++.+|. .++. +||.+|+.++... |++.|.+ ....-+ ....+++...++...
T Consensus 104 ~~-~---~~~~~~~~g~-~~~~~s~~t~~e~~~a~~~-g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~ 169 (227)
T 2tps_A 104 DA-N---AKEVRAAIGD-MILGVSAHTMSEVKQAEED-GADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQ 169 (227)
T ss_dssp SS-C---HHHHHHHHTT-SEEEEEECSHHHHHHHHHH-TCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHT
T ss_pred cc-C---HHHHHHhcCC-cEEEEecCCHHHHHHHHhC-CCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHh
Confidence 22 1 3455566786 5555 5999999998886 9999986 222111 123455666666543
No 55
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=96.31 E-value=0.0049 Score=53.83 Aligned_cols=109 Identities=17% Similarity=0.190 Sum_probs=78.5
Q ss_pred HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCC-CCCeec--cccccC-HHH-HHHHHHcCCcchHHHHhcCCH
Q 018446 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLC--KEFIVD-AWQ-IYYARTKGADAVLLIAAVLPD 274 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v-~lPVLr--KDFIId-pyQ-I~eAr~~GADAVLLIaaiL~~ 274 (355)
.++++.... |+.+|=| +++.|....++.++.+|+. . +.|++. | +.| +.+ +..+..+|||.|.+-.. -++
T Consensus 16 ~~~~~~~~~-~v~~iev-~~~~~~~~g~~~i~~l~~~-~~~~~i~~~l~--~~di~~~~~~~a~~~Gad~v~vh~~-~~~ 89 (207)
T 3ajx_A 16 LELAGKVAE-YVDIIEL-GTPLIKAEGLSVITAVKKA-HPDKIVFADMK--TMDAGELEADIAFKAGADLVTVLGS-ADD 89 (207)
T ss_dssp HHHHHHHGG-GCSEEEE-CHHHHHHHCTHHHHHHHHH-STTSEEEEEEE--ECSCHHHHHHHHHHTTCSEEEEETT-SCH
T ss_pred HHHHHHhhc-cCCEEEE-CcHHHHhhCHHHHHHHHHh-CCCCeEEEEEE--ecCccHHHHHHHHhCCCCEEEEecc-CCh
Confidence 345555555 7788888 5555555667889999985 4 788774 4 335 444 88899999999875433 234
Q ss_pred HHHHHHHHHHHHcCCcEEEEeC---CHHH-HHHHhccCCCeEEEe
Q 018446 275 LDIRYMTKICKLLGLTALVEVH---DERE-MDRVLGIEGIELIGI 315 (355)
Q Consensus 275 ~~L~~L~~~A~~LGLeaLVEVH---~~eE-LerAl~l~ga~iIGI 315 (355)
+.+..+.+.+++.|+..-|.+| |.+| ++.+... |++.|++
T Consensus 90 ~~~~~~~~~~~~~g~~~gv~~~s~~~p~~~~~~~~~~-g~d~v~~ 133 (207)
T 3ajx_A 90 STIAGAVKAAQAHNKGVVVDLIGIEDKATRAQEVRAL-GAKFVEM 133 (207)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHT-TCSEEEE
T ss_pred HHHHHHHHHHHHcCCceEEEEecCCChHHHHHHHHHh-CCCEEEE
Confidence 6788999999999999778887 6666 5565554 7888854
No 56
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=96.28 E-value=0.013 Score=57.64 Aligned_cols=125 Identities=15% Similarity=0.181 Sum_probs=91.4
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHH------HH--h
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLL------IA--A 270 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLL------Ia--a 270 (355)
-.+.++...++|++.|.|-|-..+..+-.+.++.+|+...++||+.. .+.++-+...+..+|||+|.+ +. .
T Consensus 109 ~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G-~v~t~e~A~~a~~aGAD~I~vG~gpGs~~~tr 187 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGG-NVATAEGARALIEAGVSAVKVGIGPGSICTTR 187 (366)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEE-EECSHHHHHHHHHHTCSEEEECSSCSTTBCHH
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEee-eeCCHHHHHHHHHcCCCEEEEecCCCCCCCcc
Confidence 45778888999999999877433333334557778875337888875 467889999999999999987 10 0
Q ss_pred ----c-CCH-HHHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhccCCCeEEEeeCCCCCcccc
Q 018446 271 ----V-LPD-LDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNLETFEV 325 (355)
Q Consensus 271 ----i-L~~-~~L~~L~~~A~~LGLeaLV--EVH~~eELerAl~l~ga~iIGINNRdL~Tfev 325 (355)
. .+. ..+.++.+.++..++-.+. =+.+..++.+|+.+ ||+.+++-.+=+.|-|-
T Consensus 188 ~~~g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~-GAd~V~vGs~f~~t~Es 249 (366)
T 4fo4_A 188 IVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAA-GASCVMVGSMFAGTEEA 249 (366)
T ss_dssp HHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHT-TCSEEEESTTTTTBTTS
T ss_pred cccCcccchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHc-CCCEEEEChHhhcCCCC
Confidence 1 121 2344455555678988888 79999999999997 99999998887776653
No 57
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=96.27 E-value=0.017 Score=56.35 Aligned_cols=122 Identities=15% Similarity=0.223 Sum_probs=89.1
Q ss_pred HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHH--------Hh-
Q 018446 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLI--------AA- 270 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLI--------aa- 270 (355)
.+.++.+.++||+.|.|.+-.....+-.+.++.+|+. .++||+.+. +.++-+...+..+|||+|.+- ..
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~-~~~~Vivg~-v~t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~ 184 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSK-MNIDVIVGN-VVTEEATKELIENGADGIKVGIGPGSICTTRI 184 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHH-CCCEEEEEE-ECSHHHHHHHHHTTCSEEEECSSCCTTCCHHH
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHh-cCCcEEEcc-CCCHHHHHHHHHcCcCEEEEecCCCcCCCccc
Confidence 6788999999999998866532222224677778875 589999865 578889999999999999861 01
Q ss_pred ---c-CCH-HHHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhccCCCeEEEeeCCCCCccc
Q 018446 271 ---V-LPD-LDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNLETFE 324 (355)
Q Consensus 271 ---i-L~~-~~L~~L~~~A~~LGLeaLV--EVH~~eELerAl~l~ga~iIGINNRdL~Tfe 324 (355)
. .+. ..+.++.+.++..++-.+. =|+|.+++.+++.+ ||+.+++-..=+.|-|
T Consensus 185 ~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~-GAd~V~vGs~~~~t~E 244 (361)
T 3khj_A 185 VAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAV-GASSVMIGSILAGTEE 244 (361)
T ss_dssp HTCBCCCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHH-TCSEEEESTTTTTBTT
T ss_pred ccCCCCCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHc-CCCEEEEChhhhcCCc
Confidence 1 221 2344555556778887777 48999999999997 9999998777666544
No 58
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=96.22 E-value=0.013 Score=57.11 Aligned_cols=118 Identities=16% Similarity=0.159 Sum_probs=81.4
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCC-CCCeeccccccCHHHHHHHHHcCCcchHH------H--
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLL------I-- 268 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v-~lPVLrKDFIIdpyQI~eAr~~GADAVLL------I-- 268 (355)
+-.+.++...++|+++|.+.+-..+-....+.+..+|+. + ++||+.+ .+.++-+...+..+|||+|.+ +
T Consensus 153 ~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~-~~~~pviv~-~v~~~~~a~~a~~~Gad~I~vg~~~G~~~~ 230 (404)
T 1eep_A 153 DTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTK-YPNLDLIAG-NIVTKEAALDLISVGADCLKVGIGPGSICT 230 (404)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH-CTTCEEEEE-EECSHHHHHHHHTTTCSEEEECSSCSTTSH
T ss_pred hHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHH-CCCCeEEEc-CCCcHHHHHHHHhcCCCEEEECCCCCcCcC
Confidence 345677788889999999843211111136677888885 5 7999875 456788888899999999977 1
Q ss_pred ---HhcCCHHHH---HHHHHHHHHcCCcEEE--EeCCHHHHHHHhccCCCeEEEeeCC
Q 018446 269 ---AAVLPDLDI---RYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNR 318 (355)
Q Consensus 269 ---aaiL~~~~L---~~L~~~A~~LGLeaLV--EVH~~eELerAl~l~ga~iIGINNR 318 (355)
..-.+..++ ..+.+.+...++..+. -|+|.+++.+++.+ ||+.++|-..
T Consensus 231 ~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~-GAd~V~iG~~ 287 (404)
T 1eep_A 231 TRIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAA-GADSVMIGNL 287 (404)
T ss_dssp HHHHHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHH-TCSEEEECHH
T ss_pred ccccCCCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHc-CCCHHhhCHH
Confidence 111221133 3333444456777777 69999999999997 9999999433
No 59
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=96.22 E-value=0.03 Score=54.88 Aligned_cols=95 Identities=13% Similarity=0.247 Sum_probs=72.9
Q ss_pred CCCCC--CHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHh---cC--CHHHHHHHHHHHHHc--CCcE
Q 018446 221 KYFKG--SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA---VL--PDLDIRYMTKICKLL--GLTA 291 (355)
Q Consensus 221 ~fF~G--S~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaa---iL--~~~~L~~L~~~A~~L--GLea 291 (355)
.+|.+ ++++++.+|+. +++||+.|.. .++-....|..+|||+|.+.-. .+ ....+..|.+++..+ .+..
T Consensus 198 ~~~d~~~~w~~i~~lr~~-~~~PvivK~v-~~~e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipV 275 (352)
T 3sgz_A 198 LFPKASFCWNDLSLLQSI-TRLPIILKGI-LTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEV 275 (352)
T ss_dssp -CCCTTCCHHHHHHHHHH-CCSCEEEEEE-CSHHHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEE
T ss_pred hccCCCCCHHHHHHHHHh-cCCCEEEEec-CcHHHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeE
Confidence 34554 47999999996 8999999986 6788888999999999986221 11 123556666776767 5777
Q ss_pred EEE--eCCHHHHHHHhccCCCeEEEeeCC
Q 018446 292 LVE--VHDEREMDRVLGIEGIELIGINNR 318 (355)
Q Consensus 292 LVE--VH~~eELerAl~l~ga~iIGINNR 318 (355)
+.. |++.+++.+++.+ ||+.++|-..
T Consensus 276 ia~GGI~~g~Dv~kaLal-GA~aV~iGr~ 303 (352)
T 3sgz_A 276 YMDGGVRTGTDVLKALAL-GARCIFLGRP 303 (352)
T ss_dssp EEESSCCSHHHHHHHHHT-TCSEEEESHH
T ss_pred EEECCCCCHHHHHHHHHc-CCCEEEECHH
Confidence 776 8999999999997 9999998653
No 60
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=96.20 E-value=0.008 Score=59.07 Aligned_cols=153 Identities=14% Similarity=0.140 Sum_probs=102.8
Q ss_pred CCHHHHHHHHHHcCceEEEEeccC----------CCCCCCHHHHHHHHhcCCCCCeecccc--ccCHHHHHHHHHcCCcc
Q 018446 197 FDPVEIARSYEKGGAACLSILTDE----------KYFKGSFENLEAVRSAGVKCPLLCKEF--IVDAWQIYYARTKGADA 264 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVLTD~----------~fF~GS~edL~~VR~a~v~lPVLrKDF--IIdpyQI~eAr~~GADA 264 (355)
....+..+..+..||+||.+-.+. .-|.+-+++++.+|+. +++||+.|.. ..++.....+..+|||+
T Consensus 155 ~~~e~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~-~~~PVivK~vg~g~s~e~A~~l~~aGad~ 233 (365)
T 3sr7_A 155 KPYQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKK-LQLPFILKEVGFGMDVKTIQTAIDLGVKT 233 (365)
T ss_dssp SCHHHHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHH-CCSCEEEEECSSCCCHHHHHHHHHHTCCE
T ss_pred CCHHHHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHh-hCCCEEEEECCCCCCHHHHHHHHHcCCCE
Confidence 345678888889999999988764 2244545889999986 8999999952 27899999999999999
Q ss_pred hHHHHh-----------------cC---CHHHHHHHHHHHHHc--CCcEEEE--eCCHHHHHHHhccCCCeEEEeeCCCC
Q 018446 265 VLLIAA-----------------VL---PDLDIRYMTKICKLL--GLTALVE--VHDEREMDRVLGIEGIELIGINNRNL 320 (355)
Q Consensus 265 VLLIaa-----------------iL---~~~~L~~L~~~A~~L--GLeaLVE--VH~~eELerAl~l~ga~iIGINNRdL 320 (355)
|.+.-. .+ +...+..|. .+..+ .+..+.. |+|..|+-+++.+ ||+.++|-..-|
T Consensus 234 I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~-~v~~~~~~ipvia~GGI~~g~Dv~KaLal-GAdaV~ig~~~l 311 (365)
T 3sr7_A 234 VDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLL-NAQPLMDKVEILASGGIRHPLDIIKALVL-GAKAVGLSRTML 311 (365)
T ss_dssp EECCCBC--------------CGGGTTCSCBHHHHHH-HHGGGTTTSEEEECSSCCSHHHHHHHHHH-TCSEEEESHHHH
T ss_pred EEEeCCCCcccchhhccccccccccccccccHHHHHH-HHHHhcCCCeEEEeCCCCCHHHHHHHHHc-CCCEEEECHHHH
Confidence 976311 00 111222333 34455 4555554 8999999999998 999999965433
Q ss_pred ---------------CccccChhhHHhhhccccccccccCceEEecc
Q 018446 321 ---------------ETFEVDNSNTKKLLEGERGEIIRQKNIIVSGP 352 (355)
Q Consensus 321 ---------------~TfevDl~~t~~L~~~~~~~~l~~~~i~~V~~ 352 (355)
..+.-++..+..+...-.-..|+...+++-|+
T Consensus 312 ~a~~~~G~~~v~~~l~~l~~eL~~~m~~~G~~si~eL~~~~~~~~~~ 358 (365)
T 3sr7_A 312 ELVEQHSVHEVIAIVNGWKEDLRLIMCALNCQTIAELRNVDYLLYGR 358 (365)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHHHHHTTCSSTGGGGGCCEEECHH
T ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHHHhCCcCHHHhccCCEEEccc
Confidence 23334445555555443445666666555554
No 61
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=96.16 E-value=0.012 Score=52.69 Aligned_cols=93 Identities=20% Similarity=0.125 Sum_probs=74.3
Q ss_pred CCHHHHHHHHHHcCceEEEEec---cCCCCCCCHHHHHHHHhcCCCCCeeccccccC-HHHHHHHHHcCCcchHHHHhcC
Q 018446 197 FDPVEIARSYEKGGAACLSILT---DEKYFKGSFENLEAVRSAGVKCPLLCKEFIVD-AWQIYYARTKGADAVLLIAAVL 272 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVLT---D~~fF~GS~edL~~VR~a~v~lPVLrKDFIId-pyQI~eAr~~GADAVLLIaaiL 272 (355)
.++.+.++.+++.|+..|-+.+ |..+++=+++.+..+++. +++||+.- ..|. +-++.+...+|||+|+..-+++
T Consensus 151 ~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~~-~~ipvia~-GGI~~~~d~~~~~~~Gadgv~vGsal~ 228 (253)
T 1thf_D 151 ILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-TTLPIIAS-GGAGKMEHFLEAFLAGADAALAASVFH 228 (253)
T ss_dssp EEHHHHHHHHHHTTCSEEEEEETTTTTSCSCCCHHHHHHHGGG-CCSCEEEE-SCCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred CCHHHHHHHHHHCCCCEEEEEeccCCCCCCCCCHHHHHHHHHh-cCCCEEEE-CCCCCHHHHHHHHHcCChHHHHHHHHH
Confidence 3688999999999999888753 223333468999999986 79999884 6666 6999999999999999988888
Q ss_pred CHH-HHHHHHHHHHHcCCcE
Q 018446 273 PDL-DIRYMTKICKLLGLTA 291 (355)
Q Consensus 273 ~~~-~L~~L~~~A~~LGLea 291 (355)
... ++++..++.++.|+.+
T Consensus 229 ~~~~~~~~~~~~l~~~g~~~ 248 (253)
T 1thf_D 229 FREIDVRELKEYLKKHGVNV 248 (253)
T ss_dssp TTCSCHHHHHHHHHHTTCCC
T ss_pred cCCCCHHHHHHHHHHcCCcc
Confidence 765 7888888888888753
No 62
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=96.05 E-value=0.011 Score=53.51 Aligned_cols=91 Identities=21% Similarity=0.123 Sum_probs=60.9
Q ss_pred CCHHHHHHHHHHcCceEEEEec---cCCCCCCCHHHHHHHHhcCCCCCeeccccccC-HHHHHHHHHcCCcchHHHHhcC
Q 018446 197 FDPVEIARSYEKGGAACLSILT---DEKYFKGSFENLEAVRSAGVKCPLLCKEFIVD-AWQIYYARTKGADAVLLIAAVL 272 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVLT---D~~fF~GS~edL~~VR~a~v~lPVLrKDFIId-pyQI~eAr~~GADAVLLIaaiL 272 (355)
.++.+.++.+++.|+..|-+.. |..+++=+++.++.+++. +++||+.- +.|. +-++.+...+|||+|++.-+++
T Consensus 156 ~~~~e~~~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~-~~ipvia~-GGI~~~ed~~~~~~~Gadgv~vgsal~ 233 (266)
T 2w6r_A 156 ILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-TTLPIIAS-GGAGKMEHFLEAFLAGADAALAASVFH 233 (266)
T ss_dssp EEHHHHHHHHHHTTCSEEEEEETTTTTTCSCCCHHHHHHHGGG-CCSCEEEE-SCCCSHHHHHHHHHHTCSEEEESTTTC
T ss_pred hhHHHHHHHHHHcCCCEEEEEeecCCCCcCCCCHHHHHHHHHH-cCCCEEEe-CCCCCHHHHHHHHHcCCHHHHccHHHH
Confidence 3688999999999999998732 344555578999999986 89999886 5555 7999999999999999998888
Q ss_pred CHH-HHHHHHHHHHHcCC
Q 018446 273 PDL-DIRYMTKICKLLGL 289 (355)
Q Consensus 273 ~~~-~L~~L~~~A~~LGL 289 (355)
... .++++.++..+.|+
T Consensus 234 ~~~~~~~~~~~~l~~~g~ 251 (266)
T 2w6r_A 234 FREIDMRELKEYLKKHGV 251 (266)
T ss_dssp ------------------
T ss_pred cCCCCHHHHHHHHHHCCC
Confidence 765 67777777766665
No 63
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=96.04 E-value=0.028 Score=54.85 Aligned_cols=92 Identities=14% Similarity=0.227 Sum_probs=71.4
Q ss_pred CCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHH---hcC--CHHHHHHHHHHHHHc--CCcEEEE--
Q 018446 224 KGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIA---AVL--PDLDIRYMTKICKLL--GLTALVE-- 294 (355)
Q Consensus 224 ~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIa---aiL--~~~~L~~L~~~A~~L--GLeaLVE-- 294 (355)
..++++++.+|+. +++||+-|.. .++-....+..+|||+|.+.- ..+ ....+..+.++...+ ++..+..
T Consensus 215 ~~~~~~i~~lr~~-~~~PvivK~v-~~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~GG 292 (368)
T 2nli_A 215 KISPRDIEEIAGH-SGLPVFVKGI-QHPEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFDSG 292 (368)
T ss_dssp BCCHHHHHHHHHH-SSSCEEEEEE-CSHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEECSS
T ss_pred hhhHHHHHHHHHH-cCCCEEEEcC-CCHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEECC
Confidence 3578999999996 8999999974 778888889999999998732 122 123556666666666 4777764
Q ss_pred eCCHHHHHHHhccCCCeEEEeeCC
Q 018446 295 VHDEREMDRVLGIEGIELIGINNR 318 (355)
Q Consensus 295 VH~~eELerAl~l~ga~iIGINNR 318 (355)
|++.+++.+++.+ ||+.++|-.-
T Consensus 293 I~~g~D~~kalal-GAd~V~iGr~ 315 (368)
T 2nli_A 293 VRRGEHVAKALAS-GADVVALGRP 315 (368)
T ss_dssp CCSHHHHHHHHHT-TCSEEEECHH
T ss_pred CCCHHHHHHHHHc-CCCEEEECHH
Confidence 8999999999997 9999999653
No 64
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=95.92 E-value=0.018 Score=50.62 Aligned_cols=93 Identities=25% Similarity=0.283 Sum_probs=72.5
Q ss_pred CCHHHHHHHHHHcCceEEEEec-cCCCC-CC-CHHHHHHHHhcCCCCCeeccccccC-HHHHHHHHHcCCcchHHHHhcC
Q 018446 197 FDPVEIARSYEKGGAACLSILT-DEKYF-KG-SFENLEAVRSAGVKCPLLCKEFIVD-AWQIYYARTKGADAVLLIAAVL 272 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVLT-D~~fF-~G-S~edL~~VR~a~v~lPVLrKDFIId-pyQI~eAr~~GADAVLLIaaiL 272 (355)
.++.+.++.+.+.||+.|-+.. ++... +| +++.+..+++. +++||+. +..|. +-++.+...+|||+|++--+++
T Consensus 154 ~~~~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~-~~~pvia-~GGi~~~~~~~~~~~~Ga~~v~vgsal~ 231 (253)
T 1h5y_A 154 LDAVKWAKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADS-VRIPVIA-SGGAGRVEHFYEAAAAGADAVLAASLFH 231 (253)
T ss_dssp EEHHHHHHHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHH-CSSCEEE-ESCCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred CCHHHHHHHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHh-cCCCEEE-eCCCCCHHHHHHHHHcCCcHHHHHHHHH
Confidence 4788999999999999998753 22111 11 57889999986 7899886 57776 6899999999999999888877
Q ss_pred CHH-HHHHHHHHHHHcCCcE
Q 018446 273 PDL-DIRYMTKICKLLGLTA 291 (355)
Q Consensus 273 ~~~-~L~~L~~~A~~LGLea 291 (355)
... .++++.++..+.|+.+
T Consensus 232 ~~~~~~~~~~~~l~~~g~~~ 251 (253)
T 1h5y_A 232 FRVLSIAQVKRYLKERGVEV 251 (253)
T ss_dssp TTSSCHHHHHHHHHHTTCBC
T ss_pred cCCCCHHHHHHHHHHcCCCC
Confidence 543 5788888888888763
No 65
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=95.90 E-value=0.018 Score=57.32 Aligned_cols=124 Identities=14% Similarity=0.206 Sum_probs=88.0
Q ss_pred HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHH------H--hc
Q 018446 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLI------A--AV 271 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLI------a--ai 271 (355)
.+.++.+.++|++.|++-|-..+-.+-.+.++.+|+. .++||+.+.. .++-+...+..+|||+|.+- . ..
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~-~~i~Vi~g~V-~t~e~A~~a~~aGAD~I~vG~g~Gs~~~tr~ 223 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSK-MNIDVIVGNV-VTEEATKELIENGADGIKVGIGPGSICTTRI 223 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTT-CCCEEEEEEE-CSHHHHHHHHHTTCSEEEECC---------C
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhc-CCCeEEEeec-CCHHHHHHHHHcCCCEEEEeCCCCcCccccc
Confidence 5789999999999998755421111115777888875 5899998754 67889999999999999871 1 11
Q ss_pred -----CCH-HHHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhccCCCeEEEeeCCCCCccccC
Q 018446 272 -----LPD-LDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNLETFEVD 326 (355)
Q Consensus 272 -----L~~-~~L~~L~~~A~~LGLeaLV--EVH~~eELerAl~l~ga~iIGINNRdL~TfevD 326 (355)
.+. ..+.++.+.++..++-.+. -|+|.+++.+++.+ ||+.++|-.+=+.|-|-.
T Consensus 224 ~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalal-GAd~V~vGt~f~~t~Es~ 285 (400)
T 3ffs_A 224 VAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAV-GASSVMIGSILAGTEESP 285 (400)
T ss_dssp CSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTT-TCSEEEECGGGTTBTTSS
T ss_pred ccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHc-CCCEEEEChHHhcCCCCC
Confidence 111 1234444445557888877 49999999999997 999999877766665543
No 66
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=95.80 E-value=0.026 Score=52.57 Aligned_cols=119 Identities=13% Similarity=0.116 Sum_probs=77.4
Q ss_pred CHHHHHHHHHHcCce-EEEEecc------CCCCCCCHHH----HHHHHhcCCCCCeecc---ccccCHHHH----HHHHH
Q 018446 198 DPVEIARSYEKGGAA-CLSILTD------EKYFKGSFEN----LEAVRSAGVKCPLLCK---EFIVDAWQI----YYART 259 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAa-aISVLTD------~~fF~GS~ed----L~~VR~a~v~lPVLrK---DFIIdpyQI----~eAr~ 259 (355)
+..+.|+..+++|++ +|-+.-- ...|+|+++. ++.+|++ +++||+.| |+ +..++ ..+..
T Consensus 107 ~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~-~~~Pv~vKi~~~~--~~~~~~~~a~~~~~ 183 (311)
T 1jub_A 107 ENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTF-FTKPLGVKLPPYF--DLVHFDIMAEILNQ 183 (311)
T ss_dssp HHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTT-CCSCEEEEECCCC--SHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHh-cCCCEEEEECCCC--CHHHHHHHHHHHHH
Confidence 455677777888999 8888432 1235667754 5566664 68999877 53 65564 34455
Q ss_pred cCCcchHHHHhc-----C-------------------C----HHHHHHHHHHHHHc--CCcEEE--EeCCHHHHHHHhcc
Q 018446 260 KGADAVLLIAAV-----L-------------------P----DLDIRYMTKICKLL--GLTALV--EVHDEREMDRVLGI 307 (355)
Q Consensus 260 ~GADAVLLIaai-----L-------------------~----~~~L~~L~~~A~~L--GLeaLV--EVH~~eELerAl~l 307 (355)
+|+|+|.+.-.. + + +..+..+.++.+.+ ++..+. -|+|.+++.+++.+
T Consensus 184 ~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~ 263 (311)
T 1jub_A 184 FPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLC 263 (311)
T ss_dssp SCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHH
T ss_pred cCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHc
Confidence 699998775432 1 1 12344555555556 454444 36899999999986
Q ss_pred CCCeEEEeeCCCC
Q 018446 308 EGIELIGINNRNL 320 (355)
Q Consensus 308 ~ga~iIGINNRdL 320 (355)
||+.|+|-..-+
T Consensus 264 -GAd~V~vg~~~l 275 (311)
T 1jub_A 264 -GATMLQIGTALH 275 (311)
T ss_dssp -TCSEEEECHHHH
T ss_pred -CCCEEEEchHHH
Confidence 999999865433
No 67
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=95.76 E-value=0.018 Score=56.56 Aligned_cols=123 Identities=12% Similarity=0.112 Sum_probs=87.2
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHh---c---
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA---V--- 271 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaa---i--- 271 (355)
+-.+.++...++|+++|-|-|-..+..+-.+.++.+|++..++||+.|. +.++-+...+..+|||+|.+-.. .
T Consensus 100 ~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G~-V~T~e~A~~a~~aGaD~I~Vg~g~G~~~~t 178 (361)
T 3r2g_A 100 NELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGN-VATYAGADYLASCGADIIKAGIGGGSVCST 178 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEEE-ECSHHHHHHHHHTTCSEEEECCSSSSCHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEcC-cCCHHHHHHHHHcCCCEEEEcCCCCcCccc
Confidence 3467888999999998887654333222246888888752378999986 57888999999999999986110 0
Q ss_pred -----CCHHHHHHHHHHHHHcCCcEEE---EeCCHHHHHHHhccCCCeEEEeeCCCCCccc
Q 018446 272 -----LPDLDIRYMTKICKLLGLTALV---EVHDEREMDRVLGIEGIELIGINNRNLETFE 324 (355)
Q Consensus 272 -----L~~~~L~~L~~~A~~LGLeaLV---EVH~~eELerAl~l~ga~iIGINNRdL~Tfe 324 (355)
.+..++..+.+.+.... +++ -|.+..++.+|+.+ ||+.|+|-.+=+.|-|
T Consensus 179 r~~~g~g~p~l~aI~~~~~~~~--PVIAdGGI~~~~di~kALa~-GAd~V~iGr~f~~t~E 236 (361)
T 3r2g_A 179 RIKTGFGVPMLTCIQDCSRADR--SIVADGGIKTSGDIVKALAF-GADFVMIGGMLAGSAP 236 (361)
T ss_dssp HHHHCCCCCHHHHHHHHTTSSS--EEEEESCCCSHHHHHHHHHT-TCSEEEESGGGTTBTT
T ss_pred cccCCccHHHHHHHHHHHHhCC--CEEEECCCCCHHHHHHHHHc-CCCEEEEChHHhCCcc
Confidence 01115555555555444 666 58999999999997 9999999766555543
No 68
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=95.69 E-value=0.025 Score=52.57 Aligned_cols=134 Identities=13% Similarity=-0.020 Sum_probs=79.2
Q ss_pred eEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCC-C-CCCHHHHH-HHHhcCCCCCeeccccccCHH--
Q 018446 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKY-F-KGSFENLE-AVRSAGVKCPLLCKEFIVDAW-- 252 (355)
Q Consensus 178 aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~f-F-~GS~edL~-~VR~a~v~lPVLrKDFIIdpy-- 252 (355)
-.|+-++-.||-----..+-|+....+.++++||++|.|-. +.. . +.+.+++- .+++ ...|++-........
T Consensus 4 ~~i~~~~~~~~~~~~t~g~p~~~~~~~~l~~~Gad~ielg~-pr~~~~g~~~~~~~~~l~~--~~~~~~pn~~~~~~~~~ 80 (264)
T 1xm3_A 4 LTIGGKSFQSRLLLGTGKYPSFDIQKEAVAVSESDILTFAV-RRMNIFEASQPNFLEQLDL--SKYTLLPNTAGASTAEE 80 (264)
T ss_dssp EEETTEEESCCEEEECSCSSCHHHHHHHHHHHTCSEEEEET-TSSTTC-------CTTCCG--GGSEEEEECTTCSSHHH
T ss_pred eEECCEEecCCCEEEecCCCCHHHHHHHHHHcCCeEEEEcc-cccccCCCCHHHHHHHHHh--cCCeEcCCccccCCHHH
Confidence 45777777888210011245788889999999999997654 321 1 22333332 2222 345555554432222
Q ss_pred ---HHHHHHHc-CCcchHH-HHhcCC--HHHHHHHHHHHHHc---CCcEE-EEeCCHHHHHHHhccCCCeEEEe
Q 018446 253 ---QIYYARTK-GADAVLL-IAAVLP--DLDIRYMTKICKLL---GLTAL-VEVHDEREMDRVLGIEGIELIGI 315 (355)
Q Consensus 253 ---QI~eAr~~-GADAVLL-IaaiL~--~~~L~~L~~~A~~L---GLeaL-VEVH~~eELerAl~l~ga~iIGI 315 (355)
-...++.+ |++.|.| +..-++ .+++.++++.|+++ |+.++ +++||.++++++.+. |++.|+.
T Consensus 81 ~~~f~~~a~~agg~~~i~l~i~~d~~~~~~e~~~~~~~a~~~~~~g~~vi~~~~~~~~~a~~~~~~-gad~v~~ 153 (264)
T 1xm3_A 81 AVRIARLAKASGLCDMIKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLARKLEEL-GVHAIMP 153 (264)
T ss_dssp HHHHHHHHHHTTCCSSEEECCBCCTTTCCBCHHHHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHH-TCSCBEE
T ss_pred HHHHHHHHHHcCCCCeEEEeecCCCcccccchHHHHHHHHHHHCCCeEEEEEcCCCHHHHHHHHHh-CCCEEEE
Confidence 22335555 4454332 222121 24678999999999 99999 899999999999886 8887643
No 69
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=95.66 E-value=0.02 Score=51.04 Aligned_cols=117 Identities=17% Similarity=0.188 Sum_probs=80.4
Q ss_pred CHHHHHHHHHHcCceEEEEe-ccCCCCC---CCHHHHHHHHhcCCCCCeeccccccCH-HHHHHHHHcCCcchHHHHhcC
Q 018446 198 DPVEIARSYEKGGAACLSIL-TDEKYFK---GSFENLEAVRSAGVKCPLLCKEFIVDA-WQIYYARTKGADAVLLIAAVL 272 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVL-TD~~fF~---GS~edL~~VR~a~v~lPVLrKDFIIdp-yQI~eAr~~GADAVLLIaaiL 272 (355)
+..+.++...++|+++|=+- -|..|++ ..++.++.+|+. ++.|+...=++-|+ ..+..+..+|||.|.+-....
T Consensus 24 ~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~-~~~~~~v~l~vnd~~~~v~~~~~~Gad~v~vh~~~~ 102 (230)
T 1rpx_A 24 KLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPI-TDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQS 102 (230)
T ss_dssp GHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGG-CCSCEEEEEESSSHHHHHHHHHHTTCSEEEEECSTT
T ss_pred HHHHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhc-cCCcEEEEEEecCHHHHHHHHHHcCCCEEEEEecCc
Confidence 45677888889999998774 2544533 348899999875 56675443344444 478899999999986654311
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEe--CCHHHHHHHhccCCCeEE---Eee
Q 018446 273 PDLDIRYMTKICKLLGLTALVEV--HDEREMDRVLGIEGIELI---GIN 316 (355)
Q Consensus 273 ~~~~L~~L~~~A~~LGLeaLVEV--H~~eELerAl~l~ga~iI---GIN 316 (355)
+.+.+.++++.+++.|+...+-+ ++..|.-++.. .+++.| +++
T Consensus 103 ~~~~~~~~~~~~~~~g~~ig~~~~p~t~~e~~~~~~-~~~d~vl~~~~~ 150 (230)
T 1rpx_A 103 STIHLHRTINQIKSLGAKAGVVLNPGTPLTAIEYVL-DAVDLVLIMSVN 150 (230)
T ss_dssp TCSCHHHHHHHHHHTTSEEEEEECTTCCGGGGTTTT-TTCSEEEEESSC
T ss_pred cchhHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHH-hhCCEEEEEEEc
Confidence 33466788899999999999999 44444444443 378888 554
No 70
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=95.64 E-value=0.023 Score=57.32 Aligned_cols=125 Identities=14% Similarity=0.053 Sum_probs=94.2
Q ss_pred CCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCC-CCeeccccccCHHHHHHHHHcCCcchHHHH------
Q 018446 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVK-CPLLCKEFIVDAWQIYYARTKGADAVLLIA------ 269 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~-lPVLrKDFIIdpyQI~eAr~~GADAVLLIa------ 269 (355)
.+..+.++...+.|+.++.|-+...+-.|..+.+..+++...+ +||+.++ +.+.-+...+..+|||+|.+=.
T Consensus 241 ~~~~e~~~~l~e~gv~~l~Vd~~~g~~~~~~~~i~~lk~~~~~~~~Vi~G~-V~t~~~a~~l~~aGad~I~Vg~~~g~~~ 319 (503)
T 1me8_A 241 RDFRERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGDKVKVGAGN-IVDGEGFRYLADAGADFIKIGIGGGSIC 319 (503)
T ss_dssp SSHHHHHHHHHHHTCSEEEECCSCCCSHHHHHHHHHHHHHHGGGSCEEEEE-ECSHHHHHHHHHHTCSEEEECSSCSTTC
T ss_pred hhHHHHHHHHHhhhccceEEecccCcccchhhHHHHHHHhCCCCceEeecc-ccCHHHHHHHHHhCCCeEEecccCCcCc
Confidence 4566778888888999999977766667778888888875225 8998765 6678888889999999985521
Q ss_pred --hc-----CCH-HHHHHHHHHHHHc------CCcEEE--EeCCHHHHHHHhccCCCeEEEeeCCCCCcc
Q 018446 270 --AV-----LPD-LDIRYMTKICKLL------GLTALV--EVHDEREMDRVLGIEGIELIGINNRNLETF 323 (355)
Q Consensus 270 --ai-----L~~-~~L~~L~~~A~~L------GLeaLV--EVH~~eELerAl~l~ga~iIGINNRdL~Tf 323 (355)
.. .+. .-+.+..+.+..+ ++..+. -+++..|+-+|+.+ ||+.++|-.+=+.|-
T Consensus 320 ~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAlal-GA~~V~iG~~~~~~~ 388 (503)
T 1me8_A 320 ITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALAM-GADFIMLGRYFARFE 388 (503)
T ss_dssp CSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHHT-TCSEEEESHHHHTBT
T ss_pred ccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHHc-CCCEEEECchhhccc
Confidence 11 121 2344555566666 888888 79999999999998 999999988766553
No 71
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=95.56 E-value=0.034 Score=52.93 Aligned_cols=74 Identities=26% Similarity=0.205 Sum_probs=62.6
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCC---CCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCC
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFK---GSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~---GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~ 273 (355)
|| .+|+.+++.|++++-.+..+---+ -+++.|+.+++. .++||++.==|-+|-|..+|..+|||+|++--+|..
T Consensus 145 d~-~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~-~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgSAI~~ 221 (265)
T 1wv2_A 145 DP-IIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEE-AKVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAH 221 (265)
T ss_dssp CH-HHHHHHHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHHH-CSSCBEEESCCCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred CH-HHHHHHHHhCCCEEEeCCccCCCCCCcCCHHHHHHHHhc-CCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhC
Confidence 45 599999999999997777753222 268999999985 899999977888999999999999999999888765
No 72
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=95.53 E-value=0.11 Score=46.64 Aligned_cols=120 Identities=17% Similarity=0.153 Sum_probs=81.7
Q ss_pred CHHHHHHHHHHcCceEEEEe-ccCCCCCC---CHHHHHHHHhcCCCCCeeccccccCH--HHHHHHHHcCCcchHHHHhc
Q 018446 198 DPVEIARSYEKGGAACLSIL-TDEKYFKG---SFENLEAVRSAGVKCPLLCKEFIVDA--WQIYYARTKGADAVLLIAAV 271 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVL-TD~~fF~G---S~edL~~VR~a~v~lPVLrKDFIIdp--yQI~eAr~~GADAVLLIaai 271 (355)
+..+..+...++||+.|=+- -|..|+.. .++.++.+|+. ++.|+...=|+-|| | +..+..+|||.|.+-...
T Consensus 20 ~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~-~~~~~~v~lmv~d~~~~-i~~~~~agad~v~vH~~~ 97 (228)
T 1h1y_A 20 NLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKH-TKAYLDCHLMVTNPSDY-VEPLAKAGASGFTFHIEV 97 (228)
T ss_dssp GHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTT-CCSEEEEEEESSCGGGG-HHHHHHHTCSEEEEEGGG
T ss_pred HHHHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhh-cCCcEEEEEEecCHHHH-HHHHHHcCCCEEEECCCC
Confidence 56677788889999997544 34444433 47899999985 56665544444444 5 778888999999887766
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEe--CCHHHHHHHhccC--CCeEEEeeCCCC
Q 018446 272 LPDLDIRYMTKICKLLGLTALVEV--HDEREMDRVLGIE--GIELIGINNRNL 320 (355)
Q Consensus 272 L~~~~L~~L~~~A~~LGLeaLVEV--H~~eELerAl~l~--ga~iIGINNRdL 320 (355)
.+. .+...++.++..|+.+.+-+ ++..|.-+.+... +++.|++-..+-
T Consensus 98 ~~~-~~~~~~~~i~~~g~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~p 149 (228)
T 1h1y_A 98 SRD-NWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEP 149 (228)
T ss_dssp CTT-THHHHHHHHHHTTCEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCT
T ss_pred ccc-HHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecC
Confidence 542 23677888899999999999 5544433333211 578888855543
No 73
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=95.50 E-value=0.038 Score=52.52 Aligned_cols=122 Identities=18% Similarity=0.206 Sum_probs=85.5
Q ss_pred CCHHHHHHHHHHcCceEEEEecc--------C-CCCCCCHHHHHHHHhcCCCCCeeccc--cccCHHHHHHHHHcCCcch
Q 018446 197 FDPVEIARSYEKGGAACLSILTD--------E-KYFKGSFENLEAVRSAGVKCPLLCKE--FIVDAWQIYYARTKGADAV 265 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVLTD--------~-~fF~GS~edL~~VR~a~v~lPVLrKD--FIIdpyQI~eAr~~GADAV 265 (355)
+++..+.+..+..||.++-+-.+ + .-|.+..+.++.+|+ +++||+.|. +..++-....+..+|||+|
T Consensus 132 ~~~~~~~~a~~~~~~~a~~i~~n~~~~~~~~~~~~~~~~~~~i~~vr~--~~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I 209 (332)
T 1vcf_A 132 YGRDDLLRLVEMLEADALAFHVNPLQEAVQRGDTDFRGLVERLAELLP--LPFPVMVKEVGHGLSREAALALRDLPLAAV 209 (332)
T ss_dssp CCHHHHHHHHHHHTCSEEEEECCHHHHHHTTSCCCCTTHHHHHHHHCS--CSSCEEEECSSSCCCHHHHHHHTTSCCSEE
T ss_pred cChHHHHHHHhhcCCCceeeccchHHHHhcCCCccHHHHHHHHHHHHc--CCCCEEEEecCCCCCHHHHHHHHHcCCCEE
Confidence 56777776666667776544321 1 124555789999986 699999996 2278888888999999999
Q ss_pred HHHH------------hc---------C--CHHHHHHHHHHHHHc-CCcEEE--EeCCHHHHHHHhccCCCeEEEeeCCC
Q 018446 266 LLIA------------AV---------L--PDLDIRYMTKICKLL-GLTALV--EVHDEREMDRVLGIEGIELIGINNRN 319 (355)
Q Consensus 266 LLIa------------ai---------L--~~~~L~~L~~~A~~L-GLeaLV--EVH~~eELerAl~l~ga~iIGINNRd 319 (355)
.+.- .. + ....+..+.+....+ ++..+. -|++.+++.+++.+ ||+.++|-..-
T Consensus 210 ~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~kal~~-GAd~V~igr~~ 288 (332)
T 1vcf_A 210 DVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLVASGGVYTGTDGAKALAL-GADLLAVARPL 288 (332)
T ss_dssp ECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCSSSCEEEESSCCSHHHHHHHHHH-TCSEEEECGGG
T ss_pred EeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHh-CCChHhhhHHH
Confidence 7732 11 1 112445556666677 677777 68999999999997 99999997765
Q ss_pred CC
Q 018446 320 LE 321 (355)
Q Consensus 320 L~ 321 (355)
|.
T Consensus 289 l~ 290 (332)
T 1vcf_A 289 LR 290 (332)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 74
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=95.43 E-value=0.022 Score=51.01 Aligned_cols=94 Identities=17% Similarity=0.157 Sum_probs=69.0
Q ss_pred CCCCCCCCCHHHHHHHHHHcCceEEEEec---cCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHc---CCc
Q 018446 190 RGILREDFDPVEIARSYEKGGAACLSILT---DEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTK---GAD 263 (355)
Q Consensus 190 kG~I~~~~Dp~~iA~~Ye~~GAaaISVLT---D~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~---GAD 263 (355)
+|+....-++.+.++.+++.|+..|-+.+ |..+++-+++.+.++++. +++||+.-==|-++-.+.+...+ |||
T Consensus 139 ~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~i~~~-~~ipvia~GGI~~~~d~~~~~~~~~~Gad 217 (244)
T 1vzw_A 139 RGWTRDGGDLYETLDRLNKEGCARYVVTDIAKDGTLQGPNLELLKNVCAA-TDRPVVASGGVSSLDDLRAIAGLVPAGVE 217 (244)
T ss_dssp SSSCCCCCBHHHHHHHHHHTTCCCEEEEEC-------CCCHHHHHHHHHT-CSSCEEEESCCCSHHHHHHHHTTGGGTEE
T ss_pred cCcccCCCCHHHHHHHHHhCCCCEEEEeccCcccccCCCCHHHHHHHHHh-cCCCEEEECCCCCHHHHHHHHhhccCCCc
Confidence 45444333889999999999999887765 222344468999999985 89999986555667999999999 999
Q ss_pred chHHHHhcCCHH-HHHHHHHHH
Q 018446 264 AVLLIAAVLPDL-DIRYMTKIC 284 (355)
Q Consensus 264 AVLLIaaiL~~~-~L~~L~~~A 284 (355)
+|++.-+++... .+++..++.
T Consensus 218 gv~vG~al~~~~~~~~~~~~~~ 239 (244)
T 1vzw_A 218 GAIVGKALYAKAFTLEEALEAT 239 (244)
T ss_dssp EEEECHHHHTTSSCHHHHHHHH
T ss_pred eeeeeHHHHcCCCCHHHHHHHh
Confidence 999988888653 455555543
No 75
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=95.18 E-value=0.086 Score=53.73 Aligned_cols=92 Identities=20% Similarity=0.316 Sum_probs=67.9
Q ss_pred HHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHh---cC--CHHHHHHHHHHHHHc-------CCcEEE-
Q 018446 227 FENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA---VL--PDLDIRYMTKICKLL-------GLTALV- 293 (355)
Q Consensus 227 ~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaa---iL--~~~~L~~L~~~A~~L-------GLeaLV- 293 (355)
++++..+|+. +++||+.|.. .++-....+..+|||+|.+.-. .+ ....+..+..++..+ ++..+.
T Consensus 332 ~~~i~~lr~~-~~~PvivKgv-~~~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~ 409 (511)
T 1kbi_A 332 WKDIEELKKK-TKLPIVIKGV-QRTEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVD 409 (511)
T ss_dssp HHHHHHHHHH-CSSCEEEEEE-CSHHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEE
T ss_pred HHHHHHHHHH-hCCcEEEEeC-CCHHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEE
Confidence 7899999996 8999999964 4566677888999999988211 11 112355555666655 566666
Q ss_pred -EeCCHHHHHHHhccCCCeEEEeeCCCCC
Q 018446 294 -EVHDEREMDRVLGIEGIELIGINNRNLE 321 (355)
Q Consensus 294 -EVH~~eELerAl~l~ga~iIGINNRdL~ 321 (355)
-|++.+++.+++.+ ||+.++|-..-|.
T Consensus 410 GGI~~g~Dv~kaLal-GAdaV~iGr~~l~ 437 (511)
T 1kbi_A 410 GGVRRGTDVLKALCL-GAKGVGLGRPFLY 437 (511)
T ss_dssp SSCCSHHHHHHHHHH-TCSEEEECHHHHH
T ss_pred CCCCCHHHHHHHHHc-CCCEEEECHHHHH
Confidence 48999999999998 9999999764443
No 76
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=95.14 E-value=0.039 Score=55.19 Aligned_cols=121 Identities=14% Similarity=0.157 Sum_probs=91.5
Q ss_pred HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHH-----------
Q 018446 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLI----------- 268 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLI----------- 268 (355)
.+.+..+.+.|++++-|-|...+|.+-++.+..+++. .++|++.|... ++-....+. |||+|-+=
T Consensus 230 ~~~a~~l~~~gvd~lvvdta~G~~~~~L~~I~~l~~~-~~vpvi~k~v~-~~~~a~~l~--G~d~v~vg~g~g~~~~~r~ 305 (486)
T 2cu0_A 230 IKRAIELDKAGVDVIVVDTAHAHNLKAIKSMKEMRQK-VDADFIVGNIA-NPKAVDDLT--FADAVKVGIGPGSICTTRI 305 (486)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCCCHHHHHHHHHHHHT-CCSEEEEEEEC-CHHHHTTCT--TSSEEEECSSCSTTBCHHH
T ss_pred HHHHHHHHHhcCCceEEEecCCcEeehhhHHHHHHHH-hCCccccCCcC-CHHHHHHhh--CCCeEEEeeeeccceeeeE
Confidence 6678889999999998888777888888899999985 69999999988 444443333 99998750
Q ss_pred ---HhcCCHHHHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhccCCCeEEEeeCCCCCcccc
Q 018446 269 ---AAVLPDLDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGINNRNLETFEV 325 (355)
Q Consensus 269 ---aaiL~~~~L~~L~~~A~~LGLeaLV--EVH~~eELerAl~l~ga~iIGINNRdL~Tfev 325 (355)
..+-....+..+.+.+...++.++. -+.+..++-+|+.+ ||+.+++-.+=+.|.|.
T Consensus 306 ~~~~g~~~~~~l~~~~~~~~~~~vpVia~GGi~~~~di~kalal-GA~~v~~g~~~~~~~e~ 366 (486)
T 2cu0_A 306 VAGVGVPQITAVAMVADRAQEYGLYVIADGGIRYSGDIVKAIAA-GADAVMLGNLLAGTKEA 366 (486)
T ss_dssp HTCCCCCHHHHHHHHHHHHHHHTCEEEEESCCCSHHHHHHHHHT-TCSEEEESTTTTTBTTC
T ss_pred EeecCcchHHHHHHHHHHHHHcCCcEEecCCCCCHHHHHHHHHc-CCCceeeChhhhcCccC
Confidence 0011123455556667777886666 59999999999997 99999999998877553
No 77
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=95.13 E-value=0.012 Score=53.84 Aligned_cols=122 Identities=18% Similarity=0.265 Sum_probs=77.4
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEec---cCCC----C---------CC-----CHHHHHHH
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILT---DEKY----F---------KG-----SFENLEAV 233 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLT---D~~f----F---------~G-----S~edL~~V 233 (355)
++..+|.=+--..|+. -+..++++.++++||++|-+-+ ||.. . +| .++.++.+
T Consensus 16 ~~~~~~~~i~~g~~~~------~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~i 89 (262)
T 1rd5_A 16 GKTAFIPYITAGDPDL------ATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREV 89 (262)
T ss_dssp TCCEEEEEEETTSSCH------HHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred CCceEEEEeeCCCCCH------HHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 3446766663333331 1356789999999999999953 2211 0 11 25678888
Q ss_pred HhcCCCCCeeccccccCH---HHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEe--CC-HHHHHHHhc
Q 018446 234 RSAGVKCPLLCKEFIVDA---WQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEV--HD-EREMDRVLG 306 (355)
Q Consensus 234 R~a~v~lPVLrKDFIIdp---yQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEV--H~-~eELerAl~ 306 (355)
|+. +++||...+. .++ |-+..+..+|||+|.+. -++.+++.++++.+++.|+..++=+ ++ .+.++.+..
T Consensus 90 r~~-~~~Pv~~m~~-~~~~~~~~~~~a~~aGadgv~v~--d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~ 164 (262)
T 1rd5_A 90 TPE-LSCPVVLLSY-YKPIMFRSLAKMKEAGVHGLIVP--DLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITK 164 (262)
T ss_dssp GGG-CSSCEEEECC-SHHHHSCCTHHHHHTTCCEEECT--TCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHHHH
T ss_pred Hhc-CCCCEEEEec-CcHHHHHHHHHHHHcCCCEEEEc--CCChhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHh
Confidence 886 8999865431 122 12345999999998875 3344578899999999999865544 34 444455444
No 78
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=95.11 E-value=0.025 Score=55.55 Aligned_cols=53 Identities=11% Similarity=0.159 Sum_probs=49.7
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCcccc
Q 018446 272 LPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEV 325 (355)
Q Consensus 272 L~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~Tfev 325 (355)
|+.+.++.|.++|+++||..+-|+.|.+.++.+.+. +++++=|-.||+..|..
T Consensus 88 l~~e~~~~L~~~~~~~Gi~~~st~~d~~svd~l~~~-~v~~~KI~S~~~~n~~L 140 (349)
T 2wqp_A 88 LNEEDEIKLKEYVESKGMIFISTLFSRAAALRLQRM-DIPAYKIGSGECNNYPL 140 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHH-TCSCEEECGGGTTCHHH
T ss_pred CCHHHHHHHHHHHHHhCCeEEEeeCCHHHHHHHHhc-CCCEEEECcccccCHHH
Confidence 788999999999999999999999999999998886 89999999999998765
No 79
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=95.01 E-value=0.13 Score=47.06 Aligned_cols=127 Identities=13% Similarity=0.109 Sum_probs=90.5
Q ss_pred cCCCCCCCCCCC-CHHHHHHHHHHcCceEEEE-eccCCC---CCCCHHHHHHHHhc-CCCCCeeccccccCHH-HHHHHH
Q 018446 186 ASPSRGILREDF-DPVEIARSYEKGGAACLSI-LTDEKY---FKGSFENLEAVRSA-GVKCPLLCKEFIVDAW-QIYYAR 258 (355)
Q Consensus 186 aSPSkG~I~~~~-Dp~~iA~~Ye~~GAaaISV-LTD~~f---F~GS~edL~~VR~a-~v~lPVLrKDFIIdpy-QI~eAr 258 (355)
-||| +++-|| +..+-.+..+++||..+=| .-|..| +.-..+.++.+|+. +.++|+.++=.+-+|. -+..+.
T Consensus 7 i~ps--il~~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~i~~~~ 84 (228)
T 3ovp_A 7 IGPS--ILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMA 84 (228)
T ss_dssp EEEB--CTTSCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGGGGHHHHH
T ss_pred eeee--heeCCchhHHHHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCCHHHHHHHHH
Confidence 3577 466665 5667778888999998887 445555 45678899999986 2578877655555443 366778
Q ss_pred HcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeCC---HHHHHHHhccCCCeEEEeeCC
Q 018446 259 TKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHD---EREMDRVLGIEGIELIGINNR 318 (355)
Q Consensus 259 ~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH~---~eELerAl~l~ga~iIGINNR 318 (355)
.+|||.|.+-..... .+.++++.++++|+.+-|-++. .+.++..+. .++.|.+-..
T Consensus 85 ~aGad~itvH~Ea~~--~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~l~--~~D~Vl~msv 143 (228)
T 3ovp_A 85 VAGANQYTFHLEATE--NPGALIKDIRENGMKVGLAIKPGTSVEYLAPWAN--QIDMALVMTV 143 (228)
T ss_dssp HHTCSEEEEEGGGCS--CHHHHHHHHHHTTCEEEEEECTTSCGGGTGGGGG--GCSEEEEESS
T ss_pred HcCCCEEEEccCCch--hHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHhc--cCCeEEEeee
Confidence 899999999876653 6788999999999999999984 444444443 3566655333
No 80
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=94.95 E-value=0.05 Score=49.42 Aligned_cols=129 Identities=19% Similarity=0.139 Sum_probs=90.5
Q ss_pred CCCCCCCCCCC-CHHHHHHHHHHcCceEEEEe-ccCCCC---CCCHHHHHHHHhcCCCCCeeccccccCH-HHHHHHHHc
Q 018446 187 SPSRGILREDF-DPVEIARSYEKGGAACLSIL-TDEKYF---KGSFENLEAVRSAGVKCPLLCKEFIVDA-WQIYYARTK 260 (355)
Q Consensus 187 SPSkG~I~~~~-Dp~~iA~~Ye~~GAaaISVL-TD~~fF---~GS~edL~~VR~a~v~lPVLrKDFIIdp-yQI~eAr~~ 260 (355)
+||- +.-|+ +..+..+..+++||+.|=+= -|..|. .-.++.++.+|+. ++.|+.+.=.+-|| .-+..+..+
T Consensus 8 ~psi--la~D~~~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~-~~~~~~vhlmv~dp~~~i~~~~~a 84 (230)
T 1tqj_A 8 APSI--LSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPL-TKKTLDVHLMIVEPEKYVEDFAKA 84 (230)
T ss_dssp EEBG--GGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGG-CCSEEEEEEESSSGGGTHHHHHHH
T ss_pred EEEe--eecCHhHHHHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhh-cCCcEEEEEEccCHHHHHHHHHHc
Confidence 5652 34343 56677888889999985332 254443 3456889999985 67776554444454 126778999
Q ss_pred CCcchHHHHh--cCCHHHHHHHHHHHHHcCCcEEEEe--CCHHHHHHHhccCCCeEEEeeCCCCC
Q 018446 261 GADAVLLIAA--VLPDLDIRYMTKICKLLGLTALVEV--HDEREMDRVLGIEGIELIGINNRNLE 321 (355)
Q Consensus 261 GADAVLLIaa--iL~~~~L~~L~~~A~~LGLeaLVEV--H~~eELerAl~l~ga~iIGINNRdL~ 321 (355)
|||.|.+-.. .. +.+.++++.+++.|+.+-+-+ +|..|.-+++. .+++.|++=..+-.
T Consensus 85 Gadgv~vh~e~~~~--~~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~~~-~~~D~v~~msv~pg 146 (230)
T 1tqj_A 85 GADIISVHVEHNAS--PHLHRTLCQIRELGKKAGAVLNPSTPLDFLEYVL-PVCDLILIMSVNPG 146 (230)
T ss_dssp TCSEEEEECSTTTC--TTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTG-GGCSEEEEESSCC-
T ss_pred CCCEEEECcccccc--hhHHHHHHHHHHcCCcEEEEEeCCCcHHHHHHHH-hcCCEEEEEEeccc
Confidence 9999987755 33 367889999999999999999 78777666554 37899977777665
No 81
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=94.84 E-value=0.08 Score=52.05 Aligned_cols=54 Identities=22% Similarity=0.325 Sum_probs=50.6
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCcccc
Q 018446 271 VLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEV 325 (355)
Q Consensus 271 iL~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~Tfev 325 (355)
-|+.+.++.|.++|+++||..+-|+-|.+.++...+. |++++=|-.||+..|..
T Consensus 74 el~~e~~~~L~~~~~~~Gi~~~st~fD~~svd~l~~~-~v~~~KI~S~~~~N~pL 127 (350)
T 3g8r_A 74 RLQPEQMQKLVAEMKANGFKAICTPFDEESVDLIEAH-GIEIIKIASCSFTDWPL 127 (350)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHT-TCCEEEECSSSTTCHHH
T ss_pred cCCHHHHHHHHHHHHHcCCcEEeccCCHHHHHHHHHc-CCCEEEECcccccCHHH
Confidence 4899999999999999999999999999999999887 89999999999988864
No 82
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=94.74 E-value=0.69 Score=41.00 Aligned_cols=134 Identities=16% Similarity=0.217 Sum_probs=85.6
Q ss_pred eEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCC-C-C-HHHHHHHHhcCCCCCeeccccccCHHHH
Q 018446 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFK-G-S-FENLEAVRSAGVKCPLLCKEFIVDAWQI 254 (355)
Q Consensus 178 aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~-G-S-~edL~~VR~a~v~lPVLrKDFIIdpyQI 254 (355)
.+|.-+++.-|..+.+-. ++.+.++.+.++||++|.+-++...-. | . .+.+..+|+...+++++..= -++-+.
T Consensus 71 p~i~~~~~~~~~~~~~i~--~~~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~--~t~~ea 146 (234)
T 1yxy_A 71 PIIGIIKKDYPPQEPFIT--ATMTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADI--STFDEG 146 (234)
T ss_dssp CEEEECBCCCTTSCCCBS--CSHHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEEC--SSHHHH
T ss_pred CEEeeEcCCCCccccccC--ChHHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeC--CCHHHH
Confidence 456555655554333221 356778889999999998877643221 2 2 57788888752366766532 245567
Q ss_pred HHHHHcCCcch--HHHH---hcC--CHHHHHHHHHHHHHcCCcEEEE--eCCHHHHHHHhccCCCeEEEeeC
Q 018446 255 YYARTKGADAV--LLIA---AVL--PDLDIRYMTKICKLLGLTALVE--VHDEREMDRVLGIEGIELIGINN 317 (355)
Q Consensus 255 ~eAr~~GADAV--LLIa---aiL--~~~~L~~L~~~A~~LGLeaLVE--VH~~eELerAl~l~ga~iIGINN 317 (355)
..+..+|||.| ++.- .-. ...++..+-++... ++..++. |+|.+++..++.+ ||+.+.|=.
T Consensus 147 ~~a~~~Gad~i~~~v~g~~~~~~~~~~~~~~~i~~~~~~-~ipvia~GGI~s~~~~~~~~~~-Gad~v~vGs 216 (234)
T 1yxy_A 147 LVAHQAGIDFVGTTLSGYTPYSRQEAGPDVALIEALCKA-GIAVIAEGKIHSPEEAKKINDL-GVAGIVVGG 216 (234)
T ss_dssp HHHHHTTCSEEECTTTTSSTTSCCSSSCCHHHHHHHHHT-TCCEEEESCCCSHHHHHHHHTT-CCSEEEECH
T ss_pred HHHHHcCCCEEeeeccccCCCCcCCCCCCHHHHHHHHhC-CCCEEEECCCCCHHHHHHHHHC-CCCEEEEch
Confidence 78889999998 4442 110 11234445455555 6666664 8899999999996 999888754
No 83
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=94.71 E-value=0.063 Score=49.29 Aligned_cols=126 Identities=16% Similarity=0.150 Sum_probs=87.9
Q ss_pred CCCCCCCCCCC-CHHHHHHHHHHcCceEE--EEeccCCC---CCCCHHHHHHHHhcCCCCCeeccccccCHHH-HHHHHH
Q 018446 187 SPSRGILREDF-DPVEIARSYEKGGAACL--SILTDEKY---FKGSFENLEAVRSAGVKCPLLCKEFIVDAWQ-IYYART 259 (355)
Q Consensus 187 SPSkG~I~~~~-Dp~~iA~~Ye~~GAaaI--SVLTD~~f---F~GS~edL~~VR~a~v~lPVLrKDFIIdpyQ-I~eAr~ 259 (355)
||| +++-|| +..+-.+.. ++||+.+ =|. |..| +.=.+..++.+|+. ++.|+.+.=-+-||-+ +..+..
T Consensus 4 ~pS--ila~D~~~l~~~i~~~-~~gad~lHvDvm-DG~fvpn~t~G~~~v~~lr~~-~~~~~dvhLmv~dp~~~i~~~~~ 78 (231)
T 3ctl_A 4 SPS--LMCMDLLKFKEQIEFI-DSHADYFHIDIM-DGHFVPNLTLSPFFVSQVKKL-ATKPLDCHLMVTRPQDYIAQLAR 78 (231)
T ss_dssp EEB--GGGSCGGGHHHHHHHH-HTTCSCEEEEEE-CSSSSSCCCBCHHHHHHHHTT-CCSCEEEEEESSCGGGTHHHHHH
T ss_pred Eee--hhhCChhhHHHHHHHH-HcCCCEEEEEEE-eCccCccchhcHHHHHHHHhc-cCCcEEEEEEecCHHHHHHHHHH
Confidence 576 355554 555556666 8899874 444 5443 33357899999985 6788766555556554 788899
Q ss_pred cCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeC--CHH-HHHHHhccCCCeEEEeeCCCC
Q 018446 260 KGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH--DER-EMDRVLGIEGIELIGINNRNL 320 (355)
Q Consensus 260 ~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH--~~e-ELerAl~l~ga~iIGINNRdL 320 (355)
+|||.|.+.+..+++ .+.++++.++++|+.+-|.++ |.. .++..+. ++++|.+=..|.
T Consensus 79 aGAd~itvh~Ea~~~-~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~~l~--~~D~VlvmsV~p 139 (231)
T 3ctl_A 79 AGADFITLHPETING-QAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIH--KADKITVMTVDP 139 (231)
T ss_dssp HTCSEEEECGGGCTT-THHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGG--GCSEEEEESSCT
T ss_pred cCCCEEEECcccCCc-cHHHHHHHHHHcCCeEEEEEECCCcHHHHHHHHh--cCCEEEEeeecc
Confidence 999999988777443 688999999999999999986 333 3333333 688887655544
No 84
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=94.70 E-value=0.063 Score=47.01 Aligned_cols=112 Identities=16% Similarity=0.091 Sum_probs=78.4
Q ss_pred CHHHHHHHHHHcCceEEEEec-cC---CCCCCCHHHHHHHHhcCCCCCeeccccccCHH-HHHHHHHcCCcchHHHHhcC
Q 018446 198 DPVEIARSYEKGGAACLSILT-DE---KYFKGSFENLEAVRSAGVKCPLLCKEFIVDAW-QIYYARTKGADAVLLIAAVL 272 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLT-D~---~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpy-QI~eAr~~GADAVLLIaaiL 272 (355)
+..+.++...++||..+-+-- |. .++.-.++.++.+|+. ++.|+..-=++-|+- .+..+..+|||.|.+-....
T Consensus 17 ~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~-~~~~~~v~l~v~d~~~~i~~~~~~gad~v~vh~~~~ 95 (220)
T 2fli_A 17 NFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKH-SKLVFDCHLMVVDPERYVEAFAQAGADIMTIHTEST 95 (220)
T ss_dssp GHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTT-CCSEEEEEEESSSGGGGHHHHHHHTCSEEEEEGGGC
T ss_pred HHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHh-CCCCEEEEEeecCHHHHHHHHHHcCCCEEEEccCcc
Confidence 567788889999999875542 32 3334448999999985 677776543333432 47889999999998866554
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEe--CCHHHHHHHhccCCCeEE
Q 018446 273 PDLDIRYMTKICKLLGLTALVEV--HDEREMDRVLGIEGIELI 313 (355)
Q Consensus 273 ~~~~L~~L~~~A~~LGLeaLVEV--H~~eELerAl~l~ga~iI 313 (355)
+.+..+.+.+++.|+...+-+ ++..|.-+++. .+++.|
T Consensus 96 --~~~~~~~~~~~~~g~~i~~~~~~~t~~e~~~~~~-~~~d~v 135 (220)
T 2fli_A 96 --RHIHGALQKIKAAGMKAGVVINPGTPATALEPLL-DLVDQV 135 (220)
T ss_dssp --SCHHHHHHHHHHTTSEEEEEECTTSCGGGGGGGT-TTCSEE
T ss_pred --ccHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHH-hhCCEE
Confidence 356778888888999999999 55555444444 357777
No 85
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=94.61 E-value=0.13 Score=50.78 Aligned_cols=93 Identities=15% Similarity=0.264 Sum_probs=69.6
Q ss_pred CCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHh---cC--CHHHHHHHHHHHHHcC--CcEEEE--e
Q 018446 225 GSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA---VL--PDLDIRYMTKICKLLG--LTALVE--V 295 (355)
Q Consensus 225 GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaa---iL--~~~~L~~L~~~A~~LG--LeaLVE--V 295 (355)
.++++++.+|+. +++||+.|.. .++-....+..+|||+|.+.-. .+ +...+..+.+....++ +..+.. |
T Consensus 239 ~~~~~i~~lr~~-~~~PvivKgv-~~~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~GGI 316 (392)
T 2nzl_A 239 ISWEDIKWLRRL-TSLPIVAKGI-LRGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGV 316 (392)
T ss_dssp CCHHHHHHHC---CCSCEEEEEE-CCHHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEECSSC
T ss_pred HHHHHHHHHHHh-hCCCEEEEec-CCHHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEECCC
Confidence 468999999985 8999999965 6788888899999999987321 11 1235566666766664 666663 8
Q ss_pred CCHHHHHHHhccCCCeEEEeeCCCC
Q 018446 296 HDEREMDRVLGIEGIELIGINNRNL 320 (355)
Q Consensus 296 H~~eELerAl~l~ga~iIGINNRdL 320 (355)
++.+++.+++.+ ||+.++|-.--|
T Consensus 317 ~~g~Dv~kalal-GAd~V~iGr~~l 340 (392)
T 2nzl_A 317 RKGTDVLKALAL-GAKAVFVGRPIV 340 (392)
T ss_dssp CSHHHHHHHHHT-TCSEEEECHHHH
T ss_pred CCHHHHHHHHHh-CCCeeEECHHHH
Confidence 999999999997 999999965433
No 86
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=94.59 E-value=0.02 Score=51.15 Aligned_cols=112 Identities=18% Similarity=0.081 Sum_probs=77.0
Q ss_pred HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCee--ccccccCHHHHHHHHHcCCcchHHHHhcCCHHHH
Q 018446 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLL--CKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDI 277 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVL--rKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L 277 (355)
.++++.. .+|++.+=+=+.. ++...++.++.+|+...+.|+. .|=.-...+.+.++..+|||.|.+-... +++.+
T Consensus 22 ~~~~~~~-~~~vd~ie~g~~~-~~~~G~~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~i~vh~~~-~~~~~ 98 (218)
T 3jr2_A 22 VAVASNV-ASYVDVIEVGTIL-AFAEGMKAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGADWITVSAAA-HIATI 98 (218)
T ss_dssp HHHHHHH-GGGCSEEEECHHH-HHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTCSEEEEETTS-CHHHH
T ss_pred HHHHHHh-cCCceEEEeCcHH-HHhcCHHHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCCCEEEEecCC-CHHHH
Confidence 3555554 4577777654422 2334578899998752345553 3322245678889999999987765433 34568
Q ss_pred HHHHHHHHHcCCcEEEE---eCCHHHHHHHhccCCCeEEEe
Q 018446 278 RYMTKICKLLGLTALVE---VHDEREMDRVLGIEGIELIGI 315 (355)
Q Consensus 278 ~~L~~~A~~LGLeaLVE---VH~~eELerAl~l~ga~iIGI 315 (355)
+++++.+++.|+.+.++ +.|.++++.+... |++.+++
T Consensus 99 ~~~~~~~~~~g~~~~~d~l~~~T~~~~~~~~~~-g~d~v~~ 138 (218)
T 3jr2_A 99 AACKKVADELNGEIQIEIYGNWTMQDAKAWVDL-GITQAIY 138 (218)
T ss_dssp HHHHHHHHHHTCEEEEECCSSCCHHHHHHHHHT-TCCEEEE
T ss_pred HHHHHHHHHhCCccceeeeecCCHHHHHHHHHc-Cccceee
Confidence 89999999999998654 5688899998886 8987776
No 87
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=94.26 E-value=0.06 Score=49.82 Aligned_cols=124 Identities=17% Similarity=0.206 Sum_probs=79.9
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEec---cCCCCCC-------------------CHHHHHH
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILT---DEKYFKG-------------------SFENLEA 232 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLT---D~~fF~G-------------------S~edL~~ 232 (355)
++.++|.=+=-..|+.. +-.++++.++++||++|=+=+ ||. ..| .++.++.
T Consensus 15 ~~~~~i~~i~~gdp~~~------~~~~~~~~l~~~GaD~ieig~P~sdp~-~DG~~i~~a~~~al~~G~~~~~~~~~v~~ 87 (268)
T 1qop_A 15 REGAFVPFVTLGDPGIE------QSLKIIDTLIDAGADALELGVPFSDPL-ADGPTIQNANLRAFAAGVTPAQCFEMLAI 87 (268)
T ss_dssp TCCEEEEEEETTSSCHH------HHHHHHHHHHHTTCSSEEEECCCSCCT-TCCHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred CCceEEEEeeCCCCCHH------HHHHHHHHHHHCCCCEEEECCCCCCcc-CCCHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 34567777644444321 346789999999999988744 221 112 2467888
Q ss_pred HHhcCCCCCeec---cccccC---HHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEe---CCHHHHHH
Q 018446 233 VRSAGVKCPLLC---KEFIVD---AWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEV---HDEREMDR 303 (355)
Q Consensus 233 VR~a~v~lPVLr---KDFIId---pyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEV---H~~eELer 303 (355)
+|+..+++||.. -+-+.. ..-+..+..+|||+|++. -++.+++..+++.+++.|+..++=+ .+.+.++.
T Consensus 88 ir~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~--d~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~~ 165 (268)
T 1qop_A 88 IREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVA--DVPVEESAPFRQAALRHNIAPIFICPPNADDDLLRQ 165 (268)
T ss_dssp HHHHCSSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEET--TCCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHH
T ss_pred HHhcCCCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEc--CCCHHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHH
Confidence 887547899754 111110 345677889999987764 4445678999999999999754422 44566666
Q ss_pred Hhcc
Q 018446 304 VLGI 307 (355)
Q Consensus 304 Al~l 307 (355)
....
T Consensus 166 i~~~ 169 (268)
T 1qop_A 166 VASY 169 (268)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 5543
No 88
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=94.14 E-value=0.077 Score=49.28 Aligned_cols=114 Identities=18% Similarity=0.167 Sum_probs=73.1
Q ss_pred CCHHHHHHHHHHcCceEEEEec----------------------------cCC------CCCCCHHHHHHHHhcCCCCCe
Q 018446 197 FDPVEIARSYEKGGAACLSILT----------------------------DEK------YFKGSFENLEAVRSAGVKCPL 242 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVLT----------------------------D~~------fF~GS~edL~~VR~a~v~lPV 242 (355)
.+|.+..+ ..+.||+.|+|-- +.. .+..+++.+..+++. +++|+
T Consensus 133 ~~~~~~~~-a~~~Gad~I~v~G~~~~g~~~e~~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~-~~~pv 210 (297)
T 2zbt_A 133 RNLGEALR-RIAEGAAMIRTKGEAGTGNVVEAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDH-GRLPV 210 (297)
T ss_dssp SSHHHHHH-HHHTTCSEEEECCCSSSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHH-SSCSS
T ss_pred CCHHHHHH-HHHcCCCEEEEcccccCcchHHHHhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHh-cCCCc
Confidence 46666544 5788999998751 111 245567888999885 78997
Q ss_pred e-cccccc-CHHHHHHHHHcCCcchHHHHhcCCH----HHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEee
Q 018446 243 L-CKEFIV-DAWQIYYARTKGADAVLLIAAVLPD----LDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGIN 316 (355)
Q Consensus 243 L-rKDFII-dpyQI~eAr~~GADAVLLIaaiL~~----~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGIN 316 (355)
+ -=+-.| ++-++.++..+|||+|++--+++.. +.++.|.+..+. ..+.+.+....+.-|..+.+|+
T Consensus 211 i~~a~GGI~~~e~i~~~~~aGadgvvvGsai~~~~dp~~~~~~l~~~i~~--------~~~~~~~~~~~~~~g~~~~~~~ 282 (297)
T 2zbt_A 211 VNFAAGGIATPADAALMMHLGMDGVFVGSGIFKSGDPRKRARAIVRAVAH--------YNDPEVLAEVSEDLGEPMVGIN 282 (297)
T ss_dssp CEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGGSSCHHHHHHHHHHHHHT--------TTCHHHHHHHHTTCCCCC----
T ss_pred EEEeeCCCCCHHHHHHHHHcCCCEEEEchHHhCCCCHHHHHHHHHHHHHH--------HhchHhhhHHHHhcCceeEEee
Confidence 5 246788 9999999999999999998888832 344555544443 2355666655555566788888
Q ss_pred CCCC
Q 018446 317 NRNL 320 (355)
Q Consensus 317 NRdL 320 (355)
-++|
T Consensus 283 ~~~~ 286 (297)
T 2zbt_A 283 LDQL 286 (297)
T ss_dssp ----
T ss_pred chhc
Confidence 7765
No 89
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=94.12 E-value=0.074 Score=49.62 Aligned_cols=121 Identities=12% Similarity=0.043 Sum_probs=77.1
Q ss_pred CHHHHHHHHHHcCce---EEEEecc------CCCCCCCHH----HHHHHHhcCCCCCeeccccc-cCHHH----HHHHHH
Q 018446 198 DPVEIARSYEKGGAA---CLSILTD------EKYFKGSFE----NLEAVRSAGVKCPLLCKEFI-VDAWQ----IYYART 259 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAa---aISVLTD------~~fF~GS~e----dL~~VR~a~v~lPVLrKDFI-IdpyQ----I~eAr~ 259 (355)
+..+.|+...++|++ +|-+.-- ...|+|+++ .++.+|++ +++||+.|=-. ++..+ ...+..
T Consensus 107 ~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~-~~~Pv~vK~~~~~~~~~~~~~a~~~~~ 185 (314)
T 2e6f_A 107 ENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLA-YGLPFGVKMPPYFDIAHFDTAAAVLNE 185 (314)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHH-HCSCEEEEECCCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHh-cCCCEEEEECCCCCHHHHHHHHHHHHh
Confidence 345566666777888 7777432 123455765 56667775 68999877211 36556 344567
Q ss_pred cC-CcchHHHHhc--------------C--------------CHHHHHHHHHHHHHc-CCcEEE--EeCCHHHHHHHhcc
Q 018446 260 KG-ADAVLLIAAV--------------L--------------PDLDIRYMTKICKLL-GLTALV--EVHDEREMDRVLGI 307 (355)
Q Consensus 260 ~G-ADAVLLIaai--------------L--------------~~~~L~~L~~~A~~L-GLeaLV--EVH~~eELerAl~l 307 (355)
+| +|+|.+.-.. + .+..+..+.++.+.+ ++..+. -|+|.+++.+++.+
T Consensus 186 aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~GGI~~~~da~~~l~~ 265 (314)
T 2e6f_A 186 FPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGCGGVYSGEDAFLHILA 265 (314)
T ss_dssp CTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHH
T ss_pred cCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEECCCCCHHHHHHHHHc
Confidence 89 9998754322 0 022355555666666 555444 47999999999986
Q ss_pred CCCeEEEeeCCCC
Q 018446 308 EGIELIGINNRNL 320 (355)
Q Consensus 308 ~ga~iIGINNRdL 320 (355)
||+.|+|-..-+
T Consensus 266 -GAd~V~ig~~~l 277 (314)
T 2e6f_A 266 -GASMVQVGTALQ 277 (314)
T ss_dssp -TCSSEEECHHHH
T ss_pred -CCCEEEEchhhH
Confidence 999999865433
No 90
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=94.09 E-value=0.049 Score=53.96 Aligned_cols=68 Identities=21% Similarity=0.319 Sum_probs=55.6
Q ss_pred HHHHHcCCcchHHHHh----------cCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCccc
Q 018446 255 YYARTKGADAVLLIAA----------VLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFE 324 (355)
Q Consensus 255 ~eAr~~GADAVLLIaa----------iL~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~Tfe 324 (355)
..++.+|||+|-.-+- -|+.+.++.|.++|+++||..+.|+|+.+.++.+.+. ++++=|..|+...|.
T Consensus 163 ~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~Gl~~~te~~d~~~~~~l~~~--vd~lkIgs~~~~n~~ 240 (385)
T 3nvt_A 163 ESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYGLGVISEIVTPADIEVALDY--VDVIQIGARNMQNFE 240 (385)
T ss_dssp HHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECCSGGGHHHHTTT--CSEEEECGGGTTCHH
T ss_pred HHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcCCEEEEecCCHHHHHHHHhh--CCEEEECcccccCHH
Confidence 3455667776543221 2678899999999999999999999999999999875 899999999998873
No 91
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=94.00 E-value=0.036 Score=55.14 Aligned_cols=54 Identities=17% Similarity=0.180 Sum_probs=50.2
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCcccc
Q 018446 271 VLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEV 325 (355)
Q Consensus 271 iL~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~Tfev 325 (355)
-|+.+.++.|.++|+++||..+-|+.|.+.++.+.+. +++++=|-.||+..|..
T Consensus 97 ~l~~e~~~~L~~~~~~~Gi~~~stpfD~~svd~l~~~-~vd~~KIgS~~~~N~pL 150 (385)
T 1vli_A 97 EMPAEWILPLLDYCREKQVIFLSTVCDEGSADLLQST-SPSAFKIASYEINHLPL 150 (385)
T ss_dssp SSCGGGHHHHHHHHHHTTCEEECBCCSHHHHHHHHTT-CCSCEEECGGGTTCHHH
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEccCCHHHHHHHHhc-CCCEEEECcccccCHHH
Confidence 4789999999999999999999999999999998886 89999999999998764
No 92
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=93.91 E-value=0.2 Score=46.30 Aligned_cols=121 Identities=18% Similarity=0.191 Sum_probs=77.4
Q ss_pred CceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEec---cCCCCCC-------------------CHHHHHHH
Q 018446 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILT---DEKYFKG-------------------SFENLEAV 233 (355)
Q Consensus 176 ~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLT---D~~fF~G-------------------S~edL~~V 233 (355)
+.++|.=+=.-.|+.. .-.++++.++++||++|=+=+ ||.. .| .++.++.+
T Consensus 16 ~~~~i~~i~~g~p~~~------~~~~~~~~l~~~G~D~IElG~P~sdP~a-dgp~i~~a~~~al~~G~~~~~~~~~v~~i 88 (262)
T 2ekc_A 16 EKALVSYLMVGYPDYE------TSLKAFKEVLKNGTDILEIGFPFSDPVA-DGPTIQVAHEVALKNGIRFEDVLELSETL 88 (262)
T ss_dssp BCEEEEEEETTSSCHH------HHHHHHHHHHHTTCSEEEEECCCSCCTT-SCHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred CceEEEEecCCCCChH------HHHHHHHHHHHcCCCEEEECCCCCCccc-ccHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 4466766644444421 346799999999999998843 1110 11 24668888
Q ss_pred HhcCC-CCCeecc-ccc-cC----HHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEE--EEe-CCHHHHHH
Q 018446 234 RSAGV-KCPLLCK-EFI-VD----AWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTAL--VEV-HDEREMDR 303 (355)
Q Consensus 234 R~a~v-~lPVLrK-DFI-Id----pyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaL--VEV-H~~eELer 303 (355)
|+. + ++|++.- ++= ++ ..-+..+..+|||+|++. -|+.+++..+.+.|++.|++.+ +.- ++.+.++.
T Consensus 89 r~~-~~~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~--dl~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ 165 (262)
T 2ekc_A 89 RKE-FPDIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVP--DLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKL 165 (262)
T ss_dssp HHH-CTTSCEEEECCHHHHHHHCHHHHHHHHHHTTCCEEECT--TCCHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHH
T ss_pred Hhh-cCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEEC--CCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHH
Confidence 886 6 8998772 000 00 122456889999997764 4566789999999999998743 333 44555655
Q ss_pred Hhc
Q 018446 304 VLG 306 (355)
Q Consensus 304 Al~ 306 (355)
...
T Consensus 166 ia~ 168 (262)
T 2ekc_A 166 ICE 168 (262)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 93
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=93.82 E-value=1.7 Score=38.01 Aligned_cols=146 Identities=12% Similarity=0.110 Sum_probs=92.8
Q ss_pred cHHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCC-CC-HHHHHHHHhcCCC
Q 018446 162 DFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFK-GS-FENLEAVRSAGVK 239 (355)
Q Consensus 162 dF~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~-GS-~edL~~VR~a~v~ 239 (355)
+....++... + ..++.-+|+.-|..+.+-. .+.+.+..+.+.||+.+.+-++-..-. .+ .+.+..+|+....
T Consensus 46 ~~i~~i~~~~---~-~pv~~~~~~~~~~~~~~i~--~~~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~ 119 (223)
T 1y0e_A 46 EDILAIKETV---D-LPVIGIVKRDYDHSDVFIT--ATSKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPN 119 (223)
T ss_dssp HHHHHHHHHC---C-SCEEEECBCCCTTCCCCBS--CSHHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTT
T ss_pred HHHHHHHHhc---C-CCEEeeeccCCCccccccC--CcHHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCC
Confidence 3444555432 3 3466666665433232211 234556677888999999988643211 23 4667888875225
Q ss_pred CCeeccccccCHHHHHHHHHcCCcchHHHHh-------cC--CHHHHHHHHHHHHHcCCcEEEE--eCCHHHHHHHhccC
Q 018446 240 CPLLCKEFIVDAWQIYYARTKGADAVLLIAA-------VL--PDLDIRYMTKICKLLGLTALVE--VHDEREMDRVLGIE 308 (355)
Q Consensus 240 lPVLrKDFIIdpyQI~eAr~~GADAVLLIaa-------iL--~~~~L~~L~~~A~~LGLeaLVE--VH~~eELerAl~l~ 308 (355)
.+++. + +-++.+..++..+|||.|.+-.. -. ....+..+-+++..+++..++. |+|.+++.+++.+
T Consensus 120 ~~v~~-~-~~t~~e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvia~GGI~~~~~~~~~~~~- 196 (223)
T 1y0e_A 120 VEIMA-D-IATVEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIAEGNVITPDMYKRVMDL- 196 (223)
T ss_dssp SEEEE-E-CSSHHHHHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEEESSCCSHHHHHHHHHT-
T ss_pred ceEEe-c-CCCHHHHHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCCCCEEEecCCCCHHHHHHHHHc-
Confidence 56654 3 23566788889999998754221 12 3445666767777788777774 7899999999996
Q ss_pred CCeEEEee
Q 018446 309 GIELIGIN 316 (355)
Q Consensus 309 ga~iIGIN 316 (355)
|++.+.|-
T Consensus 197 Gad~v~vG 204 (223)
T 1y0e_A 197 GVHCSVVG 204 (223)
T ss_dssp TCSEEEEC
T ss_pred CCCEEEEC
Confidence 99999885
No 94
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=93.67 E-value=0.064 Score=50.25 Aligned_cols=49 Identities=29% Similarity=0.506 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCccc
Q 018446 274 DLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFE 324 (355)
Q Consensus 274 ~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~Tfe 324 (355)
.+.|+.|.++|+++||..+.|+||...++.+.++ ++++-|..|++..+.
T Consensus 73 ~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~--vd~~kIga~~~~n~~ 121 (262)
T 1zco_A 73 EKALRWMREAADEYGLVTVTEVMDTRHVELVAKY--SDILQIGARNSQNFE 121 (262)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHHH--CSEEEECGGGTTCHH
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHHhh--CCEEEECcccccCHH
Confidence 8899999999999999999999999999999886 899999999998765
No 95
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=93.66 E-value=0.037 Score=48.28 Aligned_cols=78 Identities=18% Similarity=0.154 Sum_probs=59.0
Q ss_pred CHHHHHHHHHHcCceEEEEecc--CCCCC-CCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCH
Q 018446 198 DPVEIARSYEKGGAACLSILTD--EKYFK-GSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPD 274 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD--~~fF~-GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~ 274 (355)
++.+.++.+.+.|++.|.|-+. ..-|. ..++.++.+|+...++||.. ++.|.+-++.++..+|||+|..--++...
T Consensus 115 t~~~~~~~~~~~g~d~i~v~~g~~g~~~~~~~~~~i~~l~~~~~~~~i~~-~gGI~~~~~~~~~~~Gad~vvvGsai~~~ 193 (211)
T 3f4w_A 115 DLPARVRLLEEAGADMLAVHTGTDQQAAGRKPIDDLITMLKVRRKARIAV-AGGISSQTVKDYALLGPDVVIVGSAITHA 193 (211)
T ss_dssp SHHHHHHHHHHHTCCEEEEECCHHHHHTTCCSHHHHHHHHHHCSSCEEEE-ESSCCTTTHHHHHTTCCSEEEECHHHHTC
T ss_pred CHHHHHHHHHHcCCCEEEEcCCCcccccCCCCHHHHHHHHHHcCCCcEEE-ECCCCHHHHHHHHHcCCCEEEECHHHcCC
Confidence 5778889999999999876421 00122 26889999998523788754 99999999999999999999988777754
Q ss_pred HH
Q 018446 275 LD 276 (355)
Q Consensus 275 ~~ 276 (355)
++
T Consensus 194 ~d 195 (211)
T 3f4w_A 194 AD 195 (211)
T ss_dssp SS
T ss_pred CC
Confidence 33
No 96
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=93.65 E-value=0.1 Score=48.73 Aligned_cols=128 Identities=17% Similarity=0.187 Sum_probs=91.4
Q ss_pred ecCCCCCCCCCCC-CHHHHHHHHHHcCceEEEE-eccCCC---CCCCHHHHHHHHhcCC-CCCeeccccccCHHH-HHHH
Q 018446 185 KASPSRGILREDF-DPVEIARSYEKGGAACLSI-LTDEKY---FKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQ-IYYA 257 (355)
Q Consensus 185 RaSPSkG~I~~~~-Dp~~iA~~Ye~~GAaaISV-LTD~~f---F~GS~edL~~VR~a~v-~lPVLrKDFIIdpyQ-I~eA 257 (355)
+-||| +++-|| +..+-.+..+++||.-+=| .-|..| +.=..+.++.+|+. + ++|+.++=-+-+|.. +..+
T Consensus 29 ~i~pS--ilsaD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~-~p~~~ldvHLmv~~p~~~i~~~ 105 (246)
T 3inp_A 29 QINPS--ILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDY-GITAGMDVHLMVKPVDALIESF 105 (246)
T ss_dssp EEEEB--GGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHH-TCCSCEEEEEECSSCHHHHHHH
T ss_pred eeehh--hhcCChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHh-CCCCeEEEEEeeCCHHHHHHHH
Confidence 34788 466665 4777888889999997777 335444 45567999999986 5 889877555665543 6677
Q ss_pred HHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcc-CCCeEEEeeC
Q 018446 258 RTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGI-EGIELIGINN 317 (355)
Q Consensus 258 r~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l-~ga~iIGINN 317 (355)
..+|||.|.+-....+ .+.+.++.++++|+.+-|.++....++++..+ ++.+.|.+=.
T Consensus 106 ~~aGAd~itvH~Ea~~--~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~~vD~VlvMs 164 (246)
T 3inp_A 106 AKAGATSIVFHPEASE--HIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMS 164 (246)
T ss_dssp HHHTCSEEEECGGGCS--CHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGGGCSEEEEEC
T ss_pred HHcCCCEEEEccccch--hHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHhcCCEEEEee
Confidence 8899999999877763 68889999999999999999744444432211 2466665433
No 97
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=93.50 E-value=0.076 Score=54.36 Aligned_cols=139 Identities=18% Similarity=0.151 Sum_probs=86.1
Q ss_pred CCHHHHHHHHHHcCceEEEEeccCCCCCC------CHHHHHHHHhcCCCCCee----ccc------cccCHHH-HHHHHH
Q 018446 197 FDPVEIARSYEKGGAACLSILTDEKYFKG------SFENLEAVRSAGVKCPLL----CKE------FIVDAWQ-IYYART 259 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVLTD~~fF~G------S~edL~~VR~a~v~lPVL----rKD------FIIdpyQ-I~eAr~ 259 (355)
-||+++|+.|.++||..|.|+-=.-+..| +++.++.+++. +.+||. -+| ||..-.+ +.+...
T Consensus 280 ~dp~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~-~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~ 358 (555)
T 1jvn_A 280 GKPVQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKT-VFVPLTVGGGIKDIVDVDGTKIPALEVASLYFR 358 (555)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTT-CCSCEEEESSCSCEECTTCCEECHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhh-CCCcEEEeCccccchhcccccchHHHHHHHHHH
Confidence 49999999999999999988543333332 35677777764 789987 333 2333333 455567
Q ss_pred cCCcchHHHHhcCCHH-H----------HHHHHHHHHHcC-------CcEEE----------------------------
Q 018446 260 KGADAVLLIAAVLPDL-D----------IRYMTKICKLLG-------LTALV---------------------------- 293 (355)
Q Consensus 260 ~GADAVLLIaaiL~~~-~----------L~~L~~~A~~LG-------LeaLV---------------------------- 293 (355)
+|||.|.+-...+.+- . -.-+-++++.+| +++--
T Consensus 359 aGad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 438 (555)
T 1jvn_A 359 SGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEKYCW 438 (555)
T ss_dssp HTCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEEECEEEEEESSGGGCSSCCEECSSCCTTCCCEEE
T ss_pred cCCCEEEECCHHhhCchhhccccccccCHHHHHHHHHHhCCCcEEEEEEccccccccccccccccccccccCCCCCccee
Confidence 8999998876665320 0 112334555555 44320
Q ss_pred ------------EeCCHHHHHHHhccCCCeEEEeeCCCCCcc--ccChhhHHhhhccc
Q 018446 294 ------------EVHDEREMDRVLGIEGIELIGINNRNLETF--EVDNSNTKKLLEGE 337 (355)
Q Consensus 294 ------------EVH~~eELerAl~l~ga~iIGINNRdL~Tf--evDl~~t~~L~~~~ 337 (355)
++...+.++++.++ |+.-|-+++++-... -.|++...+|.+..
T Consensus 439 ~~v~~~Gw~~~~~~~~~e~a~~~~~~-Ga~~il~t~~~~dG~~~G~d~~li~~l~~~~ 495 (555)
T 1jvn_A 439 YQCTIKGGRESRDLGVWELTRACEAL-GAGEILLNCIDKDGSNSGYDLELIEHVKDAV 495 (555)
T ss_dssp EEEEETTTTEEEEEEHHHHHHHHHHT-TCCEEEECCGGGTTTCSCCCHHHHHHHHHHC
T ss_pred EEEEEecCccCCCCCHHHHHHHHHHc-CCCEEEEeCCCCCCCCCCCCHHHHHHHHHhC
Confidence 01124666777775 899888998876332 25777788877643
No 98
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=93.48 E-value=0.1 Score=50.99 Aligned_cols=74 Identities=19% Similarity=0.185 Sum_probs=59.8
Q ss_pred CHHHHHHHHHHcCceEEEEe-cc--C---------CCCCC---------CHHHHHHHHhcCC--CCCeeccccccCHHHH
Q 018446 198 DPVEIARSYEKGGAACLSIL-TD--E---------KYFKG---------SFENLEAVRSAGV--KCPLLCKEFIVDAWQI 254 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVL-TD--~---------~fF~G---------S~edL~~VR~a~v--~lPVLrKDFIIdpyQI 254 (355)
+..++|+..+++||++|.|- |- . ..++| +++.+..++++ + ++||+.-==|-++-++
T Consensus 235 ~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~-v~~~ipvI~~GGI~s~~da 313 (367)
T 3zwt_A 235 DKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYAL-TQGRVPIIGVGGVSSGQDA 313 (367)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHH-TTTCSCEEEESSCCSHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHH-cCCCceEEEECCCCCHHHH
Confidence 46789999999999999975 21 1 12344 46889999986 7 8999999999999999
Q ss_pred HHHHHcCCcchHHHHhcC
Q 018446 255 YYARTKGADAVLLIAAVL 272 (355)
Q Consensus 255 ~eAr~~GADAVLLIaaiL 272 (355)
.++..+|||+|.+--+++
T Consensus 314 ~~~l~~GAd~V~vgra~l 331 (367)
T 3zwt_A 314 LEKIRAGASLVQLYTALT 331 (367)
T ss_dssp HHHHHHTCSEEEESHHHH
T ss_pred HHHHHcCCCEEEECHHHH
Confidence 999999999998766654
No 99
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=93.47 E-value=0.2 Score=46.15 Aligned_cols=120 Identities=13% Similarity=0.220 Sum_probs=76.5
Q ss_pred HHHHHHHHHH-cCceEEEEecc-------CCCCCCCH----HHHHHHHhcCCCCCeecc---ccccCHHH-HHHHHHcCC
Q 018446 199 PVEIARSYEK-GGAACLSILTD-------EKYFKGSF----ENLEAVRSAGVKCPLLCK---EFIVDAWQ-IYYARTKGA 262 (355)
Q Consensus 199 p~~iA~~Ye~-~GAaaISVLTD-------~~fF~GS~----edL~~VR~a~v~lPVLrK---DFIIdpyQ-I~eAr~~GA 262 (355)
..+.|+...+ +|+++|-+.-- ...|+++. +.++.+|++ +++||..| ++ -+..+ ...+..+|+
T Consensus 113 ~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~-~~~pv~vk~~~~~-~~~~~~a~~l~~~G~ 190 (311)
T 1ep3_A 113 YVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAV-SKVPLYVKLSPNV-TDIVPIAKAVEAAGA 190 (311)
T ss_dssp HHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHH-CSSCEEEEECSCS-SCSHHHHHHHHHTTC
T ss_pred HHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHh-cCCCEEEEECCCh-HHHHHHHHHHHHcCC
Confidence 4455555555 89998866432 12355564 556667775 68999987 44 24445 556778999
Q ss_pred cchHHHH-----------h----------cCCHH----HHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhccCCCeEEEe
Q 018446 263 DAVLLIA-----------A----------VLPDL----DIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGI 315 (355)
Q Consensus 263 DAVLLIa-----------a----------iL~~~----~L~~L~~~A~~LGLeaLV--EVH~~eELerAl~l~ga~iIGI 315 (355)
|+|.+.- . .-++. .+..+.++...+++..+. -|+|.+++.+++.+ ||+.|+|
T Consensus 191 d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~ipvia~GGI~~~~d~~~~l~~-GAd~V~v 269 (311)
T 1ep3_A 191 DGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPIIGMGGVANAQDVLEMYMA-GASAVAV 269 (311)
T ss_dssp SEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSCEEECSSCCSHHHHHHHHHH-TCSEEEE
T ss_pred CEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHc-CCCEEEE
Confidence 9998732 0 11111 123333445555666555 47999999999986 9999999
Q ss_pred eCCCCC
Q 018446 316 NNRNLE 321 (355)
Q Consensus 316 NNRdL~ 321 (355)
-..-+.
T Consensus 270 g~~~l~ 275 (311)
T 1ep3_A 270 GTANFA 275 (311)
T ss_dssp CTHHHH
T ss_pred CHHHHc
Confidence 765443
No 100
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=93.39 E-value=0.31 Score=46.36 Aligned_cols=113 Identities=14% Similarity=0.118 Sum_probs=76.4
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCCCHHH----HHHHHhcCCCCCeeccccccC---HHHHHHHHHcCCcchHHHHh
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFEN----LEAVRSAGVKCPLLCKEFIVD---AWQIYYARTKGADAVLLIAA 270 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~ed----L~~VR~a~v~lPVLrKDFIId---pyQI~eAr~~GADAVLLIaa 270 (355)
++ ++|.+..++|+ +.++.- .+ -+.+. +..+|+. ++.|+-..=|+.+ .-++..+...|+|.|.+-..
T Consensus 39 ~~-~la~av~~aGg--lG~i~~-~~--~~~~~l~~~i~~i~~~-~~~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~~g 111 (326)
T 3bo9_A 39 TP-TLAAAVSEAGG--LGIIGS-GA--MKPDDLRKAISELRQK-TDKPFGVNIILVSPWADDLVKVCIEEKVPVVTFGAG 111 (326)
T ss_dssp CH-HHHHHHHHTTS--BEEEEC-TT--CCHHHHHHHHHHHHTT-CSSCEEEEEETTSTTHHHHHHHHHHTTCSEEEEESS
T ss_pred CH-HHHHHHHhCCC--cEEeCC-CC--CCHHHHHHHHHHHHHh-cCCCEEEEEeccCCCHHHHHHHHHHCCCCEEEECCC
Confidence 44 46777777774 333321 12 15554 4455653 5567644433322 35677788999999887544
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCcc
Q 018446 271 VLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETF 323 (355)
Q Consensus 271 iL~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~Tf 323 (355)
.+ ..+++..++.|+.+++.|++.+++.++.+. |++.|.+.++...+.
T Consensus 112 -~p----~~~~~~l~~~g~~v~~~v~s~~~a~~a~~~-GaD~i~v~g~~~GG~ 158 (326)
T 3bo9_A 112 -NP----TKYIRELKENGTKVIPVVASDSLARMVERA-GADAVIAEGMESGGH 158 (326)
T ss_dssp -CC----HHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCSCEEEECTTSSEE
T ss_pred -Cc----HHHHHHHHHcCCcEEEEcCCHHHHHHHHHc-CCCEEEEECCCCCcc
Confidence 33 345677788899999999999999999986 999999998776554
No 101
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=93.38 E-value=0.061 Score=49.61 Aligned_cols=74 Identities=26% Similarity=0.332 Sum_probs=56.3
Q ss_pred CHHHHHHHHHHcCceEEEEe-----------ccCC-------CCCCC------HHHHHHHHhcCCCCCeeccccccCHHH
Q 018446 198 DPVEIARSYEKGGAACLSIL-----------TDEK-------YFKGS------FENLEAVRSAGVKCPLLCKEFIVDAWQ 253 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVL-----------TD~~-------fF~GS------~edL~~VR~a~v~lPVLrKDFIIdpyQ 253 (355)
++.++|+.+++.|+++|.|- |... .|.|. ++.+..++++ +++||+.-==|-++-+
T Consensus 177 ~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~-~~ipvia~GGI~~~~d 255 (311)
T 1ep3_A 177 DIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQD-VDIPIIGMGGVANAQD 255 (311)
T ss_dssp CSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTT-CSSCEEECSSCCSHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHh-cCCCEEEECCcCCHHH
Confidence 67889999999999999993 1111 13343 4788889885 7999988555558999
Q ss_pred HHHHHHcCCcchHHHHhcC
Q 018446 254 IYYARTKGADAVLLIAAVL 272 (355)
Q Consensus 254 I~eAr~~GADAVLLIaaiL 272 (355)
+.++..+|||+|.+--+++
T Consensus 256 ~~~~l~~GAd~V~vg~~~l 274 (311)
T 1ep3_A 256 VLEMYMAGASAVAVGTANF 274 (311)
T ss_dssp HHHHHHHTCSEEEECTHHH
T ss_pred HHHHHHcCCCEEEECHHHH
Confidence 9999999999997655444
No 102
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=93.07 E-value=0.079 Score=50.64 Aligned_cols=71 Identities=20% Similarity=0.153 Sum_probs=57.8
Q ss_pred HHHHHHHHcCceEEEEeccC--------CCCCC----CHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHH
Q 018446 201 EIARSYEKGGAACLSILTDE--------KYFKG----SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLI 268 (355)
Q Consensus 201 ~iA~~Ye~~GAaaISVLTD~--------~fF~G----S~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLI 268 (355)
+.|+..+++||++|.|-.-. ....| .++.|..++++ +++||+.-==|-++-.+.+|.++|||+|.+=
T Consensus 161 e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~-~~ipVIa~GGI~~g~Dv~kalalGAdaV~iG 239 (336)
T 1ypf_A 161 EAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKA-ASKPIIADGGIRTNGDVAKSIRFGATMVMIG 239 (336)
T ss_dssp HHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHT-CSSCEEEESCCCSTHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHH-cCCcEEEeCCCCCHHHHHHHHHcCCCEEEeC
Confidence 68899999999999992211 01112 58888999886 7999999888999999999999999999987
Q ss_pred HhcC
Q 018446 269 AAVL 272 (355)
Q Consensus 269 aaiL 272 (355)
-++|
T Consensus 240 r~~l 243 (336)
T 1ypf_A 240 SLFA 243 (336)
T ss_dssp GGGT
T ss_pred hhhh
Confidence 7777
No 103
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=93.05 E-value=0.18 Score=48.47 Aligned_cols=91 Identities=21% Similarity=0.237 Sum_probs=71.3
Q ss_pred CCHHHHHHHHHHcCceEEEEec---cCC---CCCC-CHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHH
Q 018446 197 FDPVEIARSYEKGGAACLSILT---DEK---YFKG-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLI 268 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVLT---D~~---fF~G-S~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLI 268 (355)
-|..++|+.+++.|++.|.|-. ++. ...| .++.+..+|++ +++||+.--=|-++-+..++...| ||+|.+=
T Consensus 229 ~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~-~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iG 307 (340)
T 3gr7_A 229 KDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRRE-ADIPTGAVGLITSGWQAEEILQNGRADLVFLG 307 (340)
T ss_dssp GGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH-TTCCEEEESSCCCHHHHHHHHHTTSCSEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHH-cCCcEEeeCCCCCHHHHHHHHHCCCeeEEEec
Confidence 4788999999999999999963 211 1233 57788899986 899999998888999999999999 9999887
Q ss_pred HhcCCHHHHHHHHHHHHHcCCc
Q 018446 269 AAVLPDLDIRYMTKICKLLGLT 290 (355)
Q Consensus 269 aaiL~~~~L~~L~~~A~~LGLe 290 (355)
-++|.+-++ ..++++.+|.+
T Consensus 308 R~~lanPdl--~~ki~~~l~~~ 327 (340)
T 3gr7_A 308 RELLRNPYW--PYAAARELGAK 327 (340)
T ss_dssp HHHHHCTTH--HHHHHHHTTCC
T ss_pred HHHHhCchH--HHHHHHHCCCC
Confidence 666655444 34677778865
No 104
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=93.04 E-value=0.069 Score=47.82 Aligned_cols=87 Identities=17% Similarity=0.227 Sum_probs=66.0
Q ss_pred CCCHHHHHHHHHHcCceEEEEec---cCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHc-----C-CcchH
Q 018446 196 DFDPVEIARSYEKGGAACLSILT---DEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTK-----G-ADAVL 266 (355)
Q Consensus 196 ~~Dp~~iA~~Ye~~GAaaISVLT---D~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~-----G-ADAVL 266 (355)
+.++.++++.+++.|+..|-+.+ |..+++=+++.++.+++. +++||+.-==|-++-++.+.+.+ | ||+|+
T Consensus 143 ~~~~~e~~~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~-~~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~ 221 (241)
T 1qo2_A 143 EIDPVSLLKRLKEYGLEEIVHTEIEKDGTLQEHDFSLTKKIAIE-AEVKVLAAGGISSENSLKTAQKVHTETNGLLKGVI 221 (241)
T ss_dssp CCCHHHHHHHHHTTTCCEEEEEETTHHHHTCCCCHHHHHHHHHH-HTCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEE
T ss_pred CCCHHHHHHHHHhCCCCEEEEEeecccccCCcCCHHHHHHHHHh-cCCcEEEECCCCCHHHHHHHHhcccccCCeEeEEE
Confidence 35899999999999999887743 223455579999999986 79999987444447999999988 9 99999
Q ss_pred HHHhcCCH-HHHHHHHHH
Q 018446 267 LIAAVLPD-LDIRYMTKI 283 (355)
Q Consensus 267 LIaaiL~~-~~L~~L~~~ 283 (355)
+.-+++.. -.++++.++
T Consensus 222 vgsal~~~~~~~~~~~~~ 239 (241)
T 1qo2_A 222 VGRAFLEGILTVEVMKRY 239 (241)
T ss_dssp ECHHHHTTSSCHHHHHHH
T ss_pred eeHHHHcCCCCHHHHHHH
Confidence 88777643 244555444
No 105
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=92.98 E-value=0.12 Score=48.47 Aligned_cols=84 Identities=19% Similarity=0.147 Sum_probs=64.8
Q ss_pred CHHHHHHHHHHcCceEEEEec-cCCCCCCCHHHHHHHHhcCC--CCCeeccccccC-HHHHHHHHHcCCcchHHHHhcCC
Q 018446 198 DPVEIARSYEKGGAACLSILT-DEKYFKGSFENLEAVRSAGV--KCPLLCKEFIVD-AWQIYYARTKGADAVLLIAAVLP 273 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLT-D~~fF~GS~edL~~VR~a~v--~lPVLrKDFIId-pyQI~eAr~~GADAVLLIaaiL~ 273 (355)
++.++.++. +.||+.|.|.- +.+-|.-+++.+..+++. + ++|++. .++|. +-++.+.+.+|||+|+..-+++.
T Consensus 171 t~ee~~~A~-~~Gad~IGv~~r~l~~~~~dl~~~~~l~~~-v~~~~pvVa-egGI~t~edv~~l~~~GadgvlVGsal~~ 247 (272)
T 3qja_A 171 TEQEADRAL-KAGAKVIGVNARDLMTLDVDRDCFARIAPG-LPSSVIRIA-ESGVRGTADLLAYAGAGADAVLVGEGLVT 247 (272)
T ss_dssp SHHHHHHHH-HHTCSEEEEESBCTTTCCBCTTHHHHHGGG-SCTTSEEEE-ESCCCSHHHHHHHHHTTCSEEEECHHHHT
T ss_pred CHHHHHHHH-HCCCCEEEECCCcccccccCHHHHHHHHHh-CcccCEEEE-ECCCCCHHHHHHHHHcCCCEEEEcHHHhC
Confidence 566766655 45999999973 335677788999988875 5 689888 78887 99999999999999999888876
Q ss_pred HHHHHHHHHHH
Q 018446 274 DLDIRYMTKIC 284 (355)
Q Consensus 274 ~~~L~~L~~~A 284 (355)
..+....++.-
T Consensus 248 a~dp~~~~~~l 258 (272)
T 3qja_A 248 SGDPRAAVADL 258 (272)
T ss_dssp CSCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 55555544433
No 106
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=92.98 E-value=0.12 Score=45.86 Aligned_cols=85 Identities=11% Similarity=0.150 Sum_probs=65.6
Q ss_pred CHHHHHHHHHHcCceEEEEec-cCCCC-CC-CHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHc---CCcchHHHHhc
Q 018446 198 DPVEIARSYEKGGAACLSILT-DEKYF-KG-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTK---GADAVLLIAAV 271 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLT-D~~fF-~G-S~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~---GADAVLLIaai 271 (355)
++.+.++.+++.|+..|-|.+ ++..+ +| +++.+.++++. +++||+.-==|-++-.+.+...+ |||+|++--++
T Consensus 150 ~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~l~~~-~~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~al 228 (244)
T 2y88_A 150 DLWDVLERLDSEGCSRFVVTDITKDGTLGGPNLDLLAGVADR-TDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKAL 228 (244)
T ss_dssp EHHHHHHHHHHTTCCCEEEEETTTTTTTSCCCHHHHHHHHTT-CSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHH
T ss_pred CHHHHHHHHHhCCCCEEEEEecCCccccCCCCHHHHHHHHHh-CCCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHHH
Confidence 688999999999999998876 43322 33 67888899885 89999987666667999999988 99999998887
Q ss_pred CCHH-HHHHHHHH
Q 018446 272 LPDL-DIRYMTKI 283 (355)
Q Consensus 272 L~~~-~L~~L~~~ 283 (355)
+... .+.++.++
T Consensus 229 ~~~~~~~~~~~~~ 241 (244)
T 2y88_A 229 YARRFTLPQALAA 241 (244)
T ss_dssp HTTSSCHHHHHHH
T ss_pred HCCCcCHHHHHHH
Confidence 7643 34444443
No 107
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=92.89 E-value=0.21 Score=47.57 Aligned_cols=75 Identities=19% Similarity=0.065 Sum_probs=60.8
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCC---CCHHHHHHHHhcCCC-CCeeccccccCHHHHHHHHHcCCcchHHHHhcCC
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFK---GSFENLEAVRSAGVK-CPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~---GS~edL~~VR~a~v~-lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~ 273 (355)
|| .+|+..++.|++++=.+..+---+ -+.++|..+++...+ +||++-==|-+|-+.++|..+|||+||+--+|..
T Consensus 134 D~-~~ak~l~~~G~~aVmPlg~pIGsG~Gi~~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgSAI~~ 212 (268)
T 2htm_A 134 DL-VLAKRLAALGTATVMPLAAPIGSGWGVRTRALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNTAIAE 212 (268)
T ss_dssp CH-HHHHHHHHHTCSCBEEBSSSTTTCCCSTTHHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEEESHHHHT
T ss_pred CH-HHHHHHHhcCCCEEEecCccCcCCcccCCHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhC
Confidence 56 699999999999997666653221 147789999882368 9999977778899999999999999999888876
No 108
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=92.84 E-value=0.019 Score=51.78 Aligned_cols=81 Identities=19% Similarity=0.121 Sum_probs=0.0
Q ss_pred CCCHHHHHHHHHHcCceEEEEec---cCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcC
Q 018446 196 DFDPVEIARSYEKGGAACLSILT---DEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (355)
Q Consensus 196 ~~Dp~~iA~~Ye~~GAaaISVLT---D~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL 272 (355)
..++.++|+.+++.|+..|-+.+ |..+.+=+++.++.+++. +++||+.-==|-++-++.+...+|||+|++.-+++
T Consensus 155 ~~~~~~~a~~~~~~G~~~i~~t~~~~~g~~~g~~~~~~~~i~~~-~~iPvia~GGI~~~~d~~~~~~~Gad~v~vg~al~ 233 (247)
T 3tdn_A 155 GILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLRGADKVSINTAAV 233 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCHHHHHHHHHhcCCCEEEEecccCCCCcCCCCHHHHHHHHHh-CCCCEEEECCCCCHHHHHHHHHcCCcHhhccHHHH
Confidence 45788999999999999987643 122333356778888875 89999887666679999999999999999999998
Q ss_pred CHHHH
Q 018446 273 PDLDI 277 (355)
Q Consensus 273 ~~~~L 277 (355)
...++
T Consensus 234 ~~p~~ 238 (247)
T 3tdn_A 234 ENPSL 238 (247)
T ss_dssp -----
T ss_pred cCcHH
Confidence 86554
No 109
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=92.84 E-value=0.089 Score=52.71 Aligned_cols=74 Identities=15% Similarity=0.118 Sum_probs=59.0
Q ss_pred CHHHHHHHHHHcCceEEEEec-cC---------CCCC---C------CHHHHHHHHhcCC--CCCeeccccccCHHHHHH
Q 018446 198 DPVEIARSYEKGGAACLSILT-DE---------KYFK---G------SFENLEAVRSAGV--KCPLLCKEFIVDAWQIYY 256 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLT-D~---------~fF~---G------S~edL~~VR~a~v--~lPVLrKDFIIdpyQI~e 256 (355)
+..++|+..+++||++|.|-. -. .-++ | +++.+..++++ + ++||+.-==|-++-++++
T Consensus 284 ~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~-v~~~iPIIg~GGI~s~eDa~e 362 (415)
T 3i65_A 284 QKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNY-TNKQIPIIASGGIFSGLDALE 362 (415)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHH-TTTCSCEEECSSCCSHHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHH-hCCCCCEEEECCCCCHHHHHH
Confidence 368899999999999998752 11 0123 2 35788888886 6 799999999999999999
Q ss_pred HHHcCCcchHHHHhcC
Q 018446 257 ARTKGADAVLLIAAVL 272 (355)
Q Consensus 257 Ar~~GADAVLLIaaiL 272 (355)
+..+|||+|.+--+++
T Consensus 363 ~l~aGAd~VqIgra~l 378 (415)
T 3i65_A 363 KIEAGASVCQLYSCLV 378 (415)
T ss_dssp HHHHTEEEEEESHHHH
T ss_pred HHHcCCCEEEEcHHHH
Confidence 9999999998866665
No 110
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=92.82 E-value=0.05 Score=51.92 Aligned_cols=114 Identities=16% Similarity=0.191 Sum_probs=75.7
Q ss_pred CCHHHHHHHHHHcCceEEEEeccCCCCCCCHHH-HHHHHhcCCCCCee---------cccc----ccC-HHHHHHHHHcC
Q 018446 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFEN-LEAVRSAGVKCPLL---------CKEF----IVD-AWQIYYARTKG 261 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~ed-L~~VR~a~v~lPVL---------rKDF----IId-pyQI~eAr~~G 261 (355)
.|+..+......+|++| ||.|+.|- ++ +...+....++|++ +.|+ .++ .|.+.+|..+|
T Consensus 48 ~~~k~lv~~~~~~~~~a--vl~~~g~~----~~a~~~~~~~~~~~glil~l~~~~~l~~~~~~~~l~~~~~~ve~a~~~G 121 (304)
T 1to3_A 48 TDFKVNAAKILSPYASA--VLLDQQFC----YRQAVEQNAVAKSCAMIVAADDFIPGNGIPVDNVVLDKKINAQAVKRDG 121 (304)
T ss_dssp HHHHHHHHHHHGGGCSE--EEECTTTT----HHHHHHTTCSCTTSEEEEECEEEEEETTEEEEEEEECSSCCHHHHHHTT
T ss_pred hhHHHHHHHHHhcCCCE--EEeCHHHH----HHHhhcccccCCCCcEEEEECCCCCCCCCccchhhccCchhHHHHHHcC
Confidence 46777888888888887 56666532 11 00011112344544 4333 333 68999999999
Q ss_pred CcchHHHHhcCCH-------HHHHHHHHHHHHcCCcEEEEeC--------------CHHH-HHHHhccCCCeEEEeeC
Q 018446 262 ADAVLLIAAVLPD-------LDIRYMTKICKLLGLTALVEVH--------------DERE-MDRVLGIEGIELIGINN 317 (355)
Q Consensus 262 ADAVLLIaaiL~~-------~~L~~L~~~A~~LGLeaLVEVH--------------~~eE-LerAl~l~ga~iIGINN 317 (355)
||+|-+.+.+=++ +.+.++.+.|+++||..++|+- ...+ +..+.++ |+++|++.-
T Consensus 122 AdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~l-GaD~iKv~~ 198 (304)
T 1to3_A 122 AKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDS-GADLYKVEM 198 (304)
T ss_dssp CCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTS-SCSEEEECC
T ss_pred CCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHc-CCCEEEeCC
Confidence 9999755544443 5788889999999999999983 2345 5556665 999999876
No 111
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=92.77 E-value=0.14 Score=50.99 Aligned_cols=123 Identities=11% Similarity=0.123 Sum_probs=56.5
Q ss_pred CCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeecccc--------ccC-----HHHHHHHHH
Q 018446 193 LREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEF--------IVD-----AWQIYYART 259 (355)
Q Consensus 193 I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDF--------IId-----pyQI~eAr~ 259 (355)
+.++.+..+.++.+.+.+...+-|+.+...+-|-...-.-++. ..-|+.+||+ .+. ..++..+..
T Consensus 170 v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~--~~~~~~~~D~~~~l~vga~ig~~~~~~~~a~~l~~ 247 (494)
T 1vrd_A 170 APPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSV--IEHPNAARDEKGRLLVGAAVGTSPETMERVEKLVK 247 (494)
T ss_dssp ---------------------------------------CHHH--HTCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhh--hccccccccchhhhccccccCcCHhHHHHHHHHHH
Confidence 4556678889999999999999999888778886654443443 2446667775 122 468888899
Q ss_pred cCCcchHHHHhc-CCHHHHHHHHHHHHHc-CCcEEE-EeCCHHHHHHHhccCCCeEEEeeCC
Q 018446 260 KGADAVLLIAAV-LPDLDIRYMTKICKLL-GLTALV-EVHDEREMDRVLGIEGIELIGINNR 318 (355)
Q Consensus 260 ~GADAVLLIaai-L~~~~L~~L~~~A~~L-GLeaLV-EVH~~eELerAl~l~ga~iIGINNR 318 (355)
+|+|+|.+..+. .....++.+-.+...+ |+-.++ .+.+.+|+.++.++ |++.|-|.|.
T Consensus 248 aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~-G~d~I~v~~~ 308 (494)
T 1vrd_A 248 AGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKA-GADAVKVGVG 308 (494)
T ss_dssp TTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHT-TCSEEEECSS
T ss_pred hCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHc-CCCEEEEcCC
Confidence 999998874443 2333444444555555 676654 59999999999986 9999999663
No 112
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=92.72 E-value=0.45 Score=44.79 Aligned_cols=117 Identities=15% Similarity=0.122 Sum_probs=78.2
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHH----HHHHHhcCCCCCeeccccccC--------HHHH
Q 018446 187 SPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFEN----LEAVRSAGVKCPLLCKEFIVD--------AWQI 254 (355)
Q Consensus 187 SPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~ed----L~~VR~a~v~lPVLrKDFIId--------pyQI 254 (355)
+|-.|+ . ++ ++|.+..++|+ +.++.... ..+.+. +..+|+. .+.|+-. .++++ ..++
T Consensus 21 apM~gv-s---~~-~la~av~~aGg--lG~i~~~~--~~s~~~l~~~i~~i~~~-~~~p~~v-~l~v~~~~~~~~~~~~~ 89 (328)
T 2gjl_A 21 GGMQWV-G---RA-EMAAAVANAGG--LATLSALT--QPSPEALAAEIARCREL-TDRPFGV-NLTLLPTQKPVPYAEYR 89 (328)
T ss_dssp CCCTTT-C---SH-HHHHHHHHTTS--BCEEETTT--SSSHHHHHHHHHHHHHH-CSSCCEE-EEEECCCSSCCCHHHHH
T ss_pred CCCCCC-C---cH-HHHHHHHHCCC--eEEeCCCC--CCCHHHHHHHHHHHHHh-cCCCeEE-EEeccccccCccHHHHH
Confidence 455452 2 45 47777777774 33332221 123555 4556664 5566533 33443 3678
Q ss_pred HHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCC
Q 018446 255 YYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNL 320 (355)
Q Consensus 255 ~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL 320 (355)
..+..+|+|.|.+-.. .+ .++++..++.|+..++-|++.+++.++... |++.|.+.++.-
T Consensus 90 ~~~~~~g~d~V~~~~g-~p----~~~~~~l~~~gi~vi~~v~t~~~a~~~~~~-GaD~i~v~g~~~ 149 (328)
T 2gjl_A 90 AAIIEAGIRVVETAGN-DP----GEHIAEFRRHGVKVIHKCTAVRHALKAERL-GVDAVSIDGFEC 149 (328)
T ss_dssp HHHHHTTCCEEEEEES-CC----HHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCSEEEEECTTC
T ss_pred HHHHhcCCCEEEEcCC-Cc----HHHHHHHHHcCCCEEeeCCCHHHHHHHHHc-CCCEEEEECCCC
Confidence 8899999999887654 23 356677788899999999999999999886 999999987754
No 113
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=92.62 E-value=0.038 Score=52.90 Aligned_cols=90 Identities=9% Similarity=0.039 Sum_probs=62.9
Q ss_pred CCCHHHHHHHHhcCCCCCee-cccccc-CHHHHHHHHHcCCcchHHHHhcCCH----HHHHHHHHHHHHcCCcEEEEeCC
Q 018446 224 KGSFENLEAVRSAGVKCPLL-CKEFIV-DAWQIYYARTKGADAVLLIAAVLPD----LDIRYMTKICKLLGLTALVEVHD 297 (355)
Q Consensus 224 ~GS~edL~~VR~a~v~lPVL-rKDFII-dpyQI~eAr~~GADAVLLIaaiL~~----~~L~~L~~~A~~LGLeaLVEVH~ 297 (355)
+.+++.+..+++. +++||+ -=+..| ++-++.+++.+|||+|++.-+++.. +.++.|.+..+ +..+
T Consensus 193 ~~~~~ll~~i~~~-~~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a~dp~~~~~~l~~ai~--------~~~~ 263 (297)
T 4adt_A 193 RAPIDLILLTRKL-KRLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFESENPQKMASSIVMAVS--------NFNN 263 (297)
T ss_dssp TCCHHHHHHHHHH-TSCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHH--------TTTC
T ss_pred CCCHHHHHHHHHh-cCCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcCCCHHHHHHHHHHHHH--------hhCC
Confidence 4467888888885 789986 478888 9999999999999999998888842 24555555443 3467
Q ss_pred HHHHHHHhccCCCeEEEeeCCCCCc
Q 018446 298 EREMDRVLGIEGIELIGINNRNLET 322 (355)
Q Consensus 298 ~eELerAl~l~ga~iIGINNRdL~T 322 (355)
.+++..+-.--|-.+.|||..+|..
T Consensus 264 ~~~~~~i~~~~~~~~~~~~~~~~~~ 288 (297)
T 4adt_A 264 PKILLNVSLGLGKAMHGNTKVSNKW 288 (297)
T ss_dssp HHHHHHTTTTCCCCCCCCCC-----
T ss_pred HHHHHHHHhhcccCCCCCCcccccc
Confidence 7776665432266799999887754
No 114
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=92.56 E-value=0.54 Score=45.22 Aligned_cols=92 Identities=14% Similarity=0.216 Sum_probs=73.4
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHH-HHhcCCHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLL-IAAVLPDLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLL-IaaiL~~~~ 276 (355)
..++++..++.|...| |+.+-..+++.+..+|+. +++||..-+-+.++.++.++...| +|.|.+ ...+=+-.+
T Consensus 206 a~~~~~~l~~~~i~~i----EqP~~~~~~~~~~~l~~~-~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~ 280 (384)
T 2pgw_A 206 AINMCRKLEKYDIEFI----EQPTVSWSIPAMAHVREK-VGIPIVADQAAFTLYDVYEICRQRAADMICIGPREIGGIQP 280 (384)
T ss_dssp HHHHHHHHGGGCCSEE----ECCSCTTCHHHHHHHHHH-CSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHH
T ss_pred HHHHHHHHHhcCCCEE----eCCCChhhHHHHHHHHhh-CCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcchhhCCHHH
Confidence 4467788888887765 344556789999999986 899999999999999999988876 788888 444435567
Q ss_pred HHHHHHHHHHcCCcEEEEe
Q 018446 277 IRYMTKICKLLGLTALVEV 295 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEV 295 (355)
...+.++|+..|+.+.+-.
T Consensus 281 ~~~i~~~A~~~g~~~~~~~ 299 (384)
T 2pgw_A 281 MMKAAAVAEAAGLKICIHS 299 (384)
T ss_dssp HHHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHHCCCeEeecc
Confidence 7889999999999976643
No 115
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=92.56 E-value=0.56 Score=41.52 Aligned_cols=117 Identities=15% Similarity=0.088 Sum_probs=77.9
Q ss_pred CCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHh----cCCCCCeecccc----ccCHHHHHHHHHcCCcchHH
Q 018446 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRS----AGVKCPLLCKEF----IVDAWQIYYARTKGADAVLL 267 (355)
Q Consensus 196 ~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~----a~v~lPVLrKDF----IIdpyQI~eAr~~GADAVLL 267 (355)
+.++.+..+...+.|..+|-+..+.-.+.-+.+++..+|+ ++..+..+.-.+ =.-.-.|..|..+||..|.+
T Consensus 29 ~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~ 108 (257)
T 3lmz_A 29 NFDLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVG 108 (257)
T ss_dssp TSCHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEECSHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCCHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCCHHHHHHHHHHHHHhCCCEEEe
Confidence 3578888888888999999888762113445666666553 233333322111 11133577899999999886
Q ss_pred HHhcCCHHHHHHHHHHHHHcCCcEEEEeC--------CHHHHHHHhccCCCeEEEee
Q 018446 268 IAAVLPDLDIRYMTKICKLLGLTALVEVH--------DEREMDRVLGIEGIELIGIN 316 (355)
Q Consensus 268 IaaiL~~~~L~~L~~~A~~LGLeaLVEVH--------~~eELerAl~l~ga~iIGIN 316 (355)
.. +.+.|+++.++|.+.|+...+|-| +.+++.+.++. .-+-+|++
T Consensus 109 ~p---~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~ll~~-~~p~vg~~ 161 (257)
T 3lmz_A 109 VP---NYELLPYVDKKVKEYDFHYAIHLHGPDIKTYPDATDVWVHTKD-LDPRIGMC 161 (257)
T ss_dssp EE---CGGGHHHHHHHHHHHTCEEEEECCCTTCSSSCSHHHHHHHHTT-SCTTEEEE
T ss_pred cC---CHHHHHHHHHHHHHcCCEEEEecCCCcccccCCHHHHHHHHHh-CCCCccEE
Confidence 42 357899999999999999999999 46778777763 22345553
No 116
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=92.55 E-value=0.26 Score=50.42 Aligned_cols=92 Identities=22% Similarity=0.125 Sum_probs=73.2
Q ss_pred CCHHHHHHHHHHcCceEEEEecc----CCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHH-cCCcchHHHHhc
Q 018446 197 FDPVEIARSYEKGGAACLSILTD----EKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYART-KGADAVLLIAAV 271 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVLTD----~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~-~GADAVLLIaai 271 (355)
.++.++|+.+++.||+.|- +|+ ..+-+=+++.++.++++ +++||+.-==|-++-++.++.. .|||+|+.=-++
T Consensus 452 ~~~~e~a~~~~~~Ga~~il-~t~~~~dG~~~G~d~~li~~l~~~-~~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a~ 529 (555)
T 1jvn_A 452 LGVWELTRACEALGAGEIL-LNCIDKDGSNSGYDLELIEHVKDA-VKIPVIASSGAGVPEHFEEAFLKTRADACLGAGMF 529 (555)
T ss_dssp EEHHHHHHHHHHTTCCEEE-ECCGGGTTTCSCCCHHHHHHHHHH-CSSCEEECSCCCSHHHHHHHHHHSCCSEEEESHHH
T ss_pred CCHHHHHHHHHHcCCCEEE-EeCCCCCCCCCCCCHHHHHHHHHh-CCccEEEECCCCCHHHHHHHHHhcCChHHHHHHHH
Confidence 5789999999999999995 455 33333368888999986 8999999888889999999997 899999876666
Q ss_pred CCH-HHHHHHHHHHHHcCCc
Q 018446 272 LPD-LDIRYMTKICKLLGLT 290 (355)
Q Consensus 272 L~~-~~L~~L~~~A~~LGLe 290 (355)
+.. -.++++.++...-|+.
T Consensus 530 ~~~~~~~~e~~~~l~~~gi~ 549 (555)
T 1jvn_A 530 HRGEFTVNDVKEYLLEHGLK 549 (555)
T ss_dssp HTTSCCHHHHHHHHHHTTCC
T ss_pred HcCCCCHHHHHHHHHHCCCc
Confidence 554 3577777888887764
No 117
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=92.47 E-value=0.3 Score=47.33 Aligned_cols=89 Identities=17% Similarity=0.281 Sum_probs=69.7
Q ss_pred CHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHH---hcCC--HHHHHHHHHHHHHc--CCcEEEE--eC
Q 018446 226 SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIA---AVLP--DLDIRYMTKICKLL--GLTALVE--VH 296 (355)
Q Consensus 226 S~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIa---aiL~--~~~L~~L~~~A~~L--GLeaLVE--VH 296 (355)
+++++..+|+. +++||+-|-. .++-.+..+..+|||+|.+.- ..++ ...+..+.++...+ .+..+.. |+
T Consensus 213 ~~~~i~~l~~~-~~~pv~vK~~-~~~e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~GGI~ 290 (370)
T 1gox_A 213 SWKDVAWLQTI-TSLPILVKGV-ITAEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVR 290 (370)
T ss_dssp CHHHHHHHHHH-CCSCEEEECC-CSHHHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCC
T ss_pred hHHHHHHHHHH-hCCCEEEEec-CCHHHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 57899999986 8999999875 678899999999999998732 1111 12555666666667 5766664 89
Q ss_pred CHHHHHHHhccCCCeEEEeeC
Q 018446 297 DEREMDRVLGIEGIELIGINN 317 (355)
Q Consensus 297 ~~eELerAl~l~ga~iIGINN 317 (355)
+.+++.+++.+ ||+.++|-.
T Consensus 291 ~~~D~~k~l~~-GAdaV~iGr 310 (370)
T 1gox_A 291 RGTDVFKALAL-GAAGVFIGR 310 (370)
T ss_dssp SHHHHHHHHHH-TCSEEEECH
T ss_pred CHHHHHHHHHc-CCCEEeecH
Confidence 99999999997 999999864
No 118
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=92.46 E-value=0.43 Score=43.51 Aligned_cols=74 Identities=16% Similarity=0.073 Sum_probs=58.5
Q ss_pred HHHHHHHHcCceEEEE----ecc-CCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHH
Q 018446 201 EIARSYEKGGAACLSI----LTD-EKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDL 275 (355)
Q Consensus 201 ~iA~~Ye~~GAaaISV----LTD-~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~ 275 (355)
+.|+..++.||+.|.+ +|+ .+-+..+++.+..+++. ++||+.-==|-++-++.++..+|||+|++--++..+.
T Consensus 140 eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~--~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsal~~p~ 217 (232)
T 3igs_A 140 DDGLACQRLGADIIGTTMSGYTTPDTPEEPDLPLVKALHDA--GCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAITRLE 217 (232)
T ss_dssp HHHHHHHHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHT--TCCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHCHH
T ss_pred HHHHHHHhCCCCEEEEcCccCCCCCCCCCCCHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHcCCCEEEEehHhcCHH
Confidence 5677788899999975 222 22467789999999884 8999976555589999999999999999988877664
Q ss_pred H
Q 018446 276 D 276 (355)
Q Consensus 276 ~ 276 (355)
+
T Consensus 218 ~ 218 (232)
T 3igs_A 218 H 218 (232)
T ss_dssp H
T ss_pred H
Confidence 4
No 119
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=92.21 E-value=0.58 Score=43.83 Aligned_cols=115 Identities=18% Similarity=0.185 Sum_probs=69.0
Q ss_pred CHHHHHHHHHHcCceEEEEe-------------------------c---cCCC------CCCCHHHHHHHHhcCCCCCee
Q 018446 198 DPVEIARSYEKGGAACLSIL-------------------------T---DEKY------FKGSFENLEAVRSAGVKCPLL 243 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVL-------------------------T---D~~f------F~GS~edL~~VR~a~v~lPVL 243 (355)
++.+..++. +.||++|.+- | .... ...+++.+..+++. +++||+
T Consensus 134 ~~~e~~~a~-~~Gad~V~~~G~~g~g~~~~~~~h~rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~-~~iPvi 211 (305)
T 2nv1_A 134 DLGEATRRI-AEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKD-GKLPVV 211 (305)
T ss_dssp SHHHHHHHH-HTTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHH-TSCSSC
T ss_pred CHHHHHHHH-HCCCCEEEeccccCccchHHHHhhhhhhhccchhhccccchhhhcccccccccHHHHHHHHHh-cCCCEE
Confidence 567777776 7899999982 1 1111 34678889999885 789987
Q ss_pred -cccccc-CHHHHHHHHHcCCcchHHHHhcCCH----HHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeC
Q 018446 244 -CKEFIV-DAWQIYYARTKGADAVLLIAAVLPD----LDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINN 317 (355)
Q Consensus 244 -rKDFII-dpyQI~eAr~~GADAVLLIaaiL~~----~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINN 317 (355)
-=...| ++-++.++..+|||+|.+--+++.. ..++.|.+..+. ..+.+.+...-+.-|..+-|||.
T Consensus 212 ~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~~~p~~~~~~l~~~~~~--------~~~~~~~~~~~~~~g~~~~~~~~ 283 (305)
T 2nv1_A 212 NFAAGGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAIVEATTH--------FTDYKLIAELSKELGTAMKGIEI 283 (305)
T ss_dssp EEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHHHHHT--------TTCHHHHHHHTSCC---------
T ss_pred EEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcCCCHHHHHHHHHHHHHH--------hcChhhHHHHHHHhhhhhcCCCh
Confidence 246667 8999999999999999999998842 234555544332 33566665544433667888887
Q ss_pred CCCCc
Q 018446 318 RNLET 322 (355)
Q Consensus 318 RdL~T 322 (355)
..|..
T Consensus 284 ~~~~~ 288 (305)
T 2nv1_A 284 SNLLP 288 (305)
T ss_dssp -----
T ss_pred hhcch
Confidence 77743
No 120
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=92.12 E-value=0.087 Score=49.74 Aligned_cols=125 Identities=15% Similarity=0.234 Sum_probs=79.5
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEec---cC----CCCC--------------CCHHHHHHH
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILT---DE----KYFK--------------GSFENLEAV 233 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLT---D~----~fF~--------------GS~edL~~V 233 (355)
++.++|.=+=--=|+.. .-.++++.++++||+.|.+=. || ...+ .-++.++.+
T Consensus 18 ~~~ali~yi~aGdP~~~------~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~ 91 (271)
T 3nav_A 18 QQGAFVPFVTIGDPNPE------QSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQI 91 (271)
T ss_dssp TBCEEEEEEETTSSCHH------HHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCHH------HHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 45577776622222211 235788899999999998853 21 1122 225677888
Q ss_pred HhcCCCCCeecc-c---cccCHHH--HHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEe--C-CHHHHHHH
Q 018446 234 RSAGVKCPLLCK-E---FIVDAWQ--IYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEV--H-DEREMDRV 304 (355)
Q Consensus 234 R~a~v~lPVLrK-D---FIIdpyQ--I~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEV--H-~~eELerA 304 (355)
|+..+++|++-. . +...++. +.+++.+|+|++++. =|+.++..++.+.|++.|++.+.=+ . +.+.++++
T Consensus 92 r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIip--Dlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i 169 (271)
T 3nav_A 92 RARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIA--DVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAV 169 (271)
T ss_dssp HHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEET--TSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHH
T ss_pred HhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEEC--CCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHH
Confidence 864478997542 1 1122223 778899999997663 4666789999999999999854333 2 35667776
Q ss_pred hcc
Q 018446 305 LGI 307 (355)
Q Consensus 305 l~l 307 (355)
.+.
T Consensus 170 ~~~ 172 (271)
T 3nav_A 170 AQL 172 (271)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 121
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=92.12 E-value=0.084 Score=51.58 Aligned_cols=81 Identities=15% Similarity=0.125 Sum_probs=59.9
Q ss_pred CCCCCCHHHH---HHHHHHcC-ceEEEEe------------cc------CCCCCC---------CHHHHHHHHhcCCCCC
Q 018446 193 LREDFDPVEI---ARSYEKGG-AACLSIL------------TD------EKYFKG---------SFENLEAVRSAGVKCP 241 (355)
Q Consensus 193 I~~~~Dp~~i---A~~Ye~~G-AaaISVL------------TD------~~fF~G---------S~edL~~VR~a~v~lP 241 (355)
|++++|..++ |+.++++| |++|++- +. ...++| +++.+..++++..++|
T Consensus 200 i~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ip 279 (354)
T 4ef8_A 200 MPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKL 279 (354)
T ss_dssp ECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSE
T ss_pred ecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCC
Confidence 3445666555 55556887 9999861 11 134555 5888999988623799
Q ss_pred eeccccccCHHHHHHHHHcCCcchHHHHhcCC
Q 018446 242 LLCKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (355)
Q Consensus 242 VLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~ 273 (355)
|+.-==|-++-++.++..+|||+|.+--+++-
T Consensus 280 II~~GGI~s~~da~~~l~aGAd~V~vgra~l~ 311 (354)
T 4ef8_A 280 IFGCGGVYTGEDAFLHVLAGASMVQVGTALQE 311 (354)
T ss_dssp EEEESCCCSHHHHHHHHHHTEEEEEECHHHHH
T ss_pred EEEECCcCCHHHHHHHHHcCCCEEEEhHHHHH
Confidence 99988899999999999999999987666653
No 122
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=92.04 E-value=0.47 Score=46.20 Aligned_cols=84 Identities=17% Similarity=0.131 Sum_probs=58.0
Q ss_pred HHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHHHHH-HHHHcCCcEEE-EeCCHHHHHHHhcc
Q 018446 230 LEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTK-ICKLLGLTALV-EVHDEREMDRVLGI 307 (355)
Q Consensus 230 L~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~-~A~~LGLeaLV-EVH~~eELerAl~l 307 (355)
++++|+. ..+|+-..=.+-+.-++..+..+|||.|.|-.+.-....+.+.++ +.+.+++..++ .|++.++++++.++
T Consensus 87 I~~vk~~-~~~pvga~ig~~~~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~a 165 (361)
T 3khj_A 87 VLKVKNS-GGLRVGAAIGVNEIERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIEN 165 (361)
T ss_dssp HHHHHHT-TCCCCEEEECTTCHHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHCCCEEEEEEECSHHHHHHHHHT
T ss_pred HHHHHhc-cCceEEEEeCCCHHHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhcCCcEEEccCCCHHHHHHHHHc
Confidence 4445553 566754443333366778888999998877544433334444444 44556999998 99999999999997
Q ss_pred CCCeEEEe
Q 018446 308 EGIELIGI 315 (355)
Q Consensus 308 ~ga~iIGI 315 (355)
|++.|.|
T Consensus 166 -GaD~I~V 172 (361)
T 3khj_A 166 -GADGIKV 172 (361)
T ss_dssp -TCSEEEE
T ss_pred -CcCEEEE
Confidence 9999988
No 123
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=91.97 E-value=0.061 Score=50.13 Aligned_cols=73 Identities=12% Similarity=0.060 Sum_probs=55.8
Q ss_pred HHHHHHHHHHcCceEEEEec--------c----CC---------CCCC------CHHHHHHHHhcCC--CCCeecccccc
Q 018446 199 PVEIARSYEKGGAACLSILT--------D----EK---------YFKG------SFENLEAVRSAGV--KCPLLCKEFIV 249 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLT--------D----~~---------fF~G------S~edL~~VR~a~v--~lPVLrKDFII 249 (355)
..++|+..+++||++|.|-. | .. .+.| +++.+..++++ + ++||+.-==|-
T Consensus 174 ~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~-~~~~ipvi~~GGI~ 252 (311)
T 1jub_A 174 FDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTR-LKPEIQIIGTGGIE 252 (311)
T ss_dssp HHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTT-SCTTSEEEEESSCC
T ss_pred HHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHh-cCCCCCEEEECCCC
Confidence 34569999999999998732 2 00 1114 36888889885 7 89999877777
Q ss_pred CHHHHHHHHHcCCcchHHHHhcC
Q 018446 250 DAWQIYYARTKGADAVLLIAAVL 272 (355)
Q Consensus 250 dpyQI~eAr~~GADAVLLIaaiL 272 (355)
++-++.++..+|||+|.+=-+++
T Consensus 253 ~~~da~~~l~~GAd~V~vg~~~l 275 (311)
T 1jub_A 253 TGQDAFEHLLCGATMLQIGTALH 275 (311)
T ss_dssp SHHHHHHHHHHTCSEEEECHHHH
T ss_pred CHHHHHHHHHcCCCEEEEchHHH
Confidence 99999999999999998766666
No 124
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=91.95 E-value=0.36 Score=45.51 Aligned_cols=116 Identities=15% Similarity=0.099 Sum_probs=69.8
Q ss_pred HHHHHHHHH--HcCceEEEEeccCCCCCCC---------HHHHHHHHhcCC---------CCCeeccccc-cCH---HH-
Q 018446 199 PVEIARSYE--KGGAACLSILTDEKYFKGS---------FENLEAVRSAGV---------KCPLLCKEFI-VDA---WQ- 253 (355)
Q Consensus 199 p~~iA~~Ye--~~GAaaISVLTD~~fF~GS---------~edL~~VR~a~v---------~lPVLrKDFI-Idp---yQ- 253 (355)
+.+++++.+ ..|+++|-+..-.....|. .+.+..||++ + ++||+.|=-. ++. .+
T Consensus 152 ~~~~~~aa~~~~~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~-~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~ 230 (336)
T 1f76_A 152 KDDYLICMEKIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNK-QNDLQAMHHKYVPIAVKIAPDLSEEELIQV 230 (336)
T ss_dssp HHHHHHHHHHHGGGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHH-HHHHHHHHTSCCCEEEECCSCCCHHHHHHH
T ss_pred HHHHHHHHHHHhccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHH-HHhhhhcccccCceEEEecCCCCHHHHHHH
Confidence 444444443 2268887765422222221 3667778875 5 8999888110 111 22
Q ss_pred HHHHHHcCCcchHHHHhc-----------------CC-----HHHHHHHHHHHHHc--CCcEEE--EeCCHHHHHHHhcc
Q 018446 254 IYYARTKGADAVLLIAAV-----------------LP-----DLDIRYMTKICKLL--GLTALV--EVHDEREMDRVLGI 307 (355)
Q Consensus 254 I~eAr~~GADAVLLIaai-----------------L~-----~~~L~~L~~~A~~L--GLeaLV--EVH~~eELerAl~l 307 (355)
...+..+|+|+|.+.-.. ++ +..+..+..+.+.+ ++..+. -|+|.+++++++.+
T Consensus 231 a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~ 310 (336)
T 1f76_A 231 ADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAA 310 (336)
T ss_dssp HHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHH
T ss_pred HHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHC
Confidence 245567899999875332 11 11234444555556 566655 48999999999997
Q ss_pred CCCeEEEee
Q 018446 308 EGIELIGIN 316 (355)
Q Consensus 308 ~ga~iIGIN 316 (355)
||+.|+|-
T Consensus 311 -GAd~V~ig 318 (336)
T 1f76_A 311 -GASLVQIY 318 (336)
T ss_dssp -TCSEEEES
T ss_pred -CCCEEEee
Confidence 99999884
No 125
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=91.94 E-value=0.93 Score=39.81 Aligned_cols=64 Identities=16% Similarity=0.110 Sum_probs=45.3
Q ss_pred HHHHHHHHHcCCcchHHHHhcCC--------HHHHHHHHHHHHHcCCcEEEEeC--------CHHHHHHHhccCCCeEEE
Q 018446 251 AWQIYYARTKGADAVLLIAAVLP--------DLDIRYMTKICKLLGLTALVEVH--------DEREMDRVLGIEGIELIG 314 (355)
Q Consensus 251 pyQI~eAr~~GADAVLLIaaiL~--------~~~L~~L~~~A~~LGLeaLVEVH--------~~eELerAl~l~ga~iIG 314 (355)
...|..|..+||+.|.+....-+ -+.|.++.++|.+.|+...+|-| +.+++.+.++.-+ +-+|
T Consensus 88 ~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~~~~~~~~~~~~~~~l~~~v~-~~~g 166 (272)
T 2q02_A 88 EGLLRDAQGVGARALVLCPLNDGTIVPPEVTVEAIKRLSDLFARYDIQGLVEPLGFRVSSLRSAVWAQQLIREAG-SPFK 166 (272)
T ss_dssp HHHHHHHHHHTCSEEEECCCCSSBCCCHHHHHHHHHHHHHHHHTTTCEEEECCCCSTTCSCCCHHHHHHHHHHHT-CCCE
T ss_pred HHHHHHHHHhCCCEEEEccCCCchhHHHHHHHHHHHHHHHHHHHcCCEEEEEecCCCcccccCHHHHHHHHHHhC-cCeE
Confidence 45677788999998876433211 45678889999999999999998 4677777665323 4455
Q ss_pred e
Q 018446 315 I 315 (355)
Q Consensus 315 I 315 (355)
+
T Consensus 167 ~ 167 (272)
T 2q02_A 167 V 167 (272)
T ss_dssp E
T ss_pred E
Confidence 4
No 126
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=91.85 E-value=0.21 Score=48.14 Aligned_cols=73 Identities=10% Similarity=0.125 Sum_probs=56.7
Q ss_pred CHHHHHHHHHHcCceEEEEeccCC--CCCC---------CHHHHHHHHhcCC-CCCeeccccccCHHHHHHHHHcCCcch
Q 018446 198 DPVEIARSYEKGGAACLSILTDEK--YFKG---------SFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAV 265 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~--fF~G---------S~edL~~VR~a~v-~lPVLrKDFIIdpyQI~eAr~~GADAV 265 (355)
+..++|+.++++|+++|.|-.-.. .|.| .++.+..++++ + ++||+.-==|-++-++.++.. |||+|
T Consensus 145 ~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~-~~~iPVianGgI~s~eda~~~l~-GaD~V 222 (350)
T 3b0p_A 145 GLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGD-FPQLTFVTNGGIRSLEEALFHLK-RVDGV 222 (350)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHH-CTTSEEEEESSCCSHHHHHHHHT-TSSEE
T ss_pred HHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHh-CCCCeEEEECCcCCHHHHHHHHh-CCCEE
Confidence 567899999999999999854321 2333 58889999986 7 899999888889999999987 99999
Q ss_pred HHHHhcC
Q 018446 266 LLIAAVL 272 (355)
Q Consensus 266 LLIaaiL 272 (355)
.+=-++|
T Consensus 223 ~iGRa~l 229 (350)
T 3b0p_A 223 MLGRAVY 229 (350)
T ss_dssp EECHHHH
T ss_pred EECHHHH
Confidence 7744443
No 127
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=91.83 E-value=0.13 Score=48.67 Aligned_cols=74 Identities=14% Similarity=0.132 Sum_probs=58.0
Q ss_pred CHHHHHHHHHHcCceEEEEecc---CC---------CC---CC------CHHHHHHHHhcCC--CCCeeccccccCHHHH
Q 018446 198 DPVEIARSYEKGGAACLSILTD---EK---------YF---KG------SFENLEAVRSAGV--KCPLLCKEFIVDAWQI 254 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD---~~---------fF---~G------S~edL~~VR~a~v--~lPVLrKDFIIdpyQI 254 (355)
|..++|+..+++|+++|.|-.- .. -+ .| +++.+..++++ + ++||+.-==|-++-++
T Consensus 226 ~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~-~~~~ipVi~~GGI~~~~da 304 (336)
T 1f76_A 226 ELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLE-LNGRLPIIGVGGIDSVIAA 304 (336)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHH-HTTSSCEEEESSCCSHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHH-hCCCCCEEEECCCCCHHHH
Confidence 4577899999999999997411 00 12 23 25788888886 6 8999999999999999
Q ss_pred HHHHHcCCcchHHHHhcC
Q 018446 255 YYARTKGADAVLLIAAVL 272 (355)
Q Consensus 255 ~eAr~~GADAVLLIaaiL 272 (355)
.++...|||+|.+=-++|
T Consensus 305 ~~~l~~GAd~V~igr~~l 322 (336)
T 1f76_A 305 REKIAAGASLVQIYSGFI 322 (336)
T ss_dssp HHHHHHTCSEEEESHHHH
T ss_pred HHHHHCCCCEEEeeHHHH
Confidence 999999999998766555
No 128
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=91.79 E-value=0.22 Score=47.89 Aligned_cols=116 Identities=15% Similarity=0.078 Sum_probs=82.0
Q ss_pred HHHHHHHHcCceEEEEeccCCC-------------CCCCHHHHHHH-Hh---cCCCCCeeccccccCH-----HHHHHHH
Q 018446 201 EIARSYEKGGAACLSILTDEKY-------------FKGSFENLEAV-RS---AGVKCPLLCKEFIVDA-----WQIYYAR 258 (355)
Q Consensus 201 ~iA~~Ye~~GAaaISVLTD~~f-------------F~GS~edL~~V-R~---a~v~lPVLrKDFIIdp-----yQI~eAr 258 (355)
--|+.-+++||+-|=++--..| |+-+.+-.... ++ ...++||++-=.-.|| +=+.+-+
T Consensus 39 lsAk~~e~gGaDlii~ynsGrfR~~G~~slag~lpygnaN~iv~e~~~evlp~v~~iPV~Agv~~~DP~~~~g~~Le~lk 118 (286)
T 2p10_A 39 LSAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVVDMAREVLPVVRHTPVLAGVNGTDPFMVMSTFLRELK 118 (286)
T ss_dssp HHHHHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGCSSSCEEEEECTTCTTCCHHHHHHHHH
T ss_pred hhhHHHHhCCCCEEEEeccchhhhcCccchhhhccccCHHHHHHHHHHhhhccCCCCCEEEEECCcCCCcCHHHHHHHHH
Confidence 4678888999999988765544 32222222222 21 1126788765222332 3346678
Q ss_pred HcCCcchHHHHh----------------cCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCC
Q 018446 259 TKGADAVLLIAA----------------VLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNR 318 (355)
Q Consensus 259 ~~GADAVLLIaa----------------iL~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNR 318 (355)
.+|+.+| +... =|+-++..++++.|+++||..++-|.|.+|...+..+ |+++|.++==
T Consensus 119 ~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti~~v~~~eeA~amA~a-gpDiI~~h~g 192 (286)
T 2p10_A 119 EIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTTPYVFSPEDAVAMAKA-GADILVCHMG 192 (286)
T ss_dssp HHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEECCEECSHHHHHHHHHH-TCSEEEEECS
T ss_pred HhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHc-CCCEEEECCC
Confidence 8999999 5544 2466788899999999999999999999999999887 9999988744
No 129
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=91.78 E-value=0.48 Score=47.84 Aligned_cols=154 Identities=14% Similarity=0.139 Sum_probs=111.7
Q ss_pred CceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEec-cCCCCCCCHHHHHHHHhc-CCCCCeeccccccCHHH
Q 018446 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILT-DEKYFKGSFENLEAVRSA-GVKCPLLCKEFIVDAWQ 253 (355)
Q Consensus 176 ~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLT-D~~fF~GS~edL~~VR~a-~v~lPVLrKDFIIdpyQ 253 (355)
..-+++|+ .|..++.++.. .||..|.|.- |-+-|.=+++....++.. ..+.++++-==|-.|-|
T Consensus 157 gm~~LvEv-------------h~~eE~~~A~~-lga~iIGinnr~L~t~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~ed 222 (452)
T 1pii_A 157 EMGVLTEV-------------SNEEEQERAIA-LGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGINTYAQ 222 (452)
T ss_dssp TCEEEEEE-------------CSHHHHHHHHH-TTCSEEEEESEETTTTEECTHHHHHHHHHHCTTSEEEEESCCCCHHH
T ss_pred CCeEEEEe-------------CCHHHHHHHHH-CCCCEEEEeCCCCCCCCCCHHHHHHHHHhCCCCCeEEEECCCCCHHH
Confidence 35789998 26677766654 6999999963 333466677777776653 12567888877888999
Q ss_pred HHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCccccChhhHHhh
Q 018446 254 IYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEVDNSNTKKL 333 (355)
Q Consensus 254 I~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~TfevDl~~t~~L 333 (355)
+..++.+ |||||.=-+++..++....++--. .|.--+.-+.+.+++..|.++ ||+.+|..=-.-.--.|+++++.+|
T Consensus 223 v~~~~~~-a~avLVGealmr~~d~~~~~~~l~-~~~~KICGit~~eda~~a~~~-Gad~iGfIf~~~SpR~V~~~~a~~i 299 (452)
T 1pii_A 223 VRELSHF-ANGFLIGSALMAHDDLHAAVRRVL-LGENKVCGLTRGQDAKAAYDA-GAIYGGLIFVATSPRCVNVEQAQEV 299 (452)
T ss_dssp HHHHTTT-CSEEEECHHHHTCSCHHHHHHHHH-HCSCEECCCCSHHHHHHHHHH-TCSEEEEECCTTCTTBCCHHHHHHH
T ss_pred HHHHHHh-CCEEEEcHHHcCCcCHHHHHHHHH-HHhccccCCCcHHHHHHHHhc-CCCEEEeecCCCCCCCCCHHHHHHH
Confidence 9999999 999998777665444333222111 366678888999999999997 9999999954334456899999999
Q ss_pred hccccccccccCceEEecccc
Q 018446 334 LEGERGEIIRQKNIIVSGPFT 354 (355)
Q Consensus 334 ~~~~~~~~l~~~~i~~V~~~~ 354 (355)
... ..+..||-|.
T Consensus 300 ~~~--------~~v~~VgVFv 312 (452)
T 1pii_A 300 MAA--------APLQYVGVFR 312 (452)
T ss_dssp HHH--------CCCEEEEEES
T ss_pred Hhc--------CCCCEEEEEe
Confidence 765 1467888774
No 130
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=91.77 E-value=0.14 Score=48.26 Aligned_cols=125 Identities=20% Similarity=0.263 Sum_probs=81.0
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEe---ccC----CCCC---------C-----CHHHHHHH
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSIL---TDE----KYFK---------G-----SFENLEAV 233 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVL---TD~----~fF~---------G-----S~edL~~V 233 (355)
++.++|.=+=-.=|+.. .-.++++.++++||+.|-+= +|| .+.+ | -++.++.+
T Consensus 16 ~~~ali~yi~aGdP~~~------~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~i 89 (267)
T 3vnd_A 16 DKGAFVPFVTIGDPSPE------LSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKV 89 (267)
T ss_dssp TCCEEEEEEETTSSCHH------HHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCHH------HHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 45578876622222210 23578899999999999985 232 2222 2 16778888
Q ss_pred HhcCCCCCeecc---ccc-cC--HHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeC---CHHHHHHH
Q 018446 234 RSAGVKCPLLCK---EFI-VD--AWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRV 304 (355)
Q Consensus 234 R~a~v~lPVLrK---DFI-Id--pyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH---~~eELerA 304 (355)
|+..+++||+-. +-| .. +--+..++.+|+|+|++. =|+.++..++.+.|++.|++.+.=+. +.+.++.+
T Consensus 90 r~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~--Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i 167 (267)
T 3vnd_A 90 RAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIA--DVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMV 167 (267)
T ss_dssp HHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEET--TSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHH
T ss_pred HhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeC--CCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHH
Confidence 874378997542 111 11 112778899999997663 56667899999999999999764442 35777777
Q ss_pred hcc
Q 018446 305 LGI 307 (355)
Q Consensus 305 l~l 307 (355)
.+.
T Consensus 168 ~~~ 170 (267)
T 3vnd_A 168 SEQ 170 (267)
T ss_dssp HHH
T ss_pred HHh
Confidence 665
No 131
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=91.74 E-value=0.26 Score=48.98 Aligned_cols=138 Identities=13% Similarity=0.053 Sum_probs=76.0
Q ss_pred CccHHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccC-----CCC--CCCHHHHHH
Q 018446 160 ARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDE-----KYF--KGSFENLEA 232 (355)
Q Consensus 160 ~rdF~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~-----~fF--~GS~edL~~ 232 (355)
...+..|+.+. |.+++|. .+.+|.++++...+....---+.++| +.| +-+++..+.
T Consensus 55 ~~~lA~Ava~a----GGlGvi~-------------~~~~~e~~~~~i~~vk~~~~g~~~~P~~~~~nL~~~~~~~~~~~~ 117 (400)
T 3ffs_A 55 EHLMAVGMARL----GGIGIIH-------------KNMDMESQVNEVLKVKNWISNLEKNESTPDQNLDKESTDGKDTKS 117 (400)
T ss_dssp SSHHHHHHHTT----TCEEEEC-------------SSSCHHHHHHHHHHHHCCC--------------------------
T ss_pred cHHHHHHHHHC----CCEEEeC-------------CCCCHHHHHHHHHHHHhhccCcccCCCCccccccCCCCCHHHHHH
Confidence 44677777664 6788887 14567777766654322110011121 112 112222333
Q ss_pred HHhcCCCCCeecccc-----------ccCHHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHH-cCCcEEE-EeCCHH
Q 018446 233 VRSAGVKCPLLCKEF-----------IVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKL-LGLTALV-EVHDER 299 (355)
Q Consensus 233 VR~a~v~lPVLrKDF-----------IIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~-LGLeaLV-EVH~~e 299 (355)
+.++ ...|--+||- +-+.-++..+...|+|.|.+-.+.-.+..+.++++..++ +|+..++ .|++.+
T Consensus 118 ~~~~-~~~p~~~~d~~g~l~v~~~v~~~~~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~~i~Vi~g~V~t~e 196 (400)
T 3ffs_A 118 NNNI-DAYSNENLDNKGRLRVGAAIGVNEIERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNVVTEE 196 (400)
T ss_dssp ------CCTTCCBCTTSSBCCEEEECCC-CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEEEEEECSHH
T ss_pred HHHh-hhCcchhhccccceeEEeecCCCHHHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcCCCeEEEeecCCHH
Confidence 3332 2345555551 012457777888999998774444333355555655544 5999997 999999
Q ss_pred HHHHHhccCCCeEEEee
Q 018446 300 EMDRVLGIEGIELIGIN 316 (355)
Q Consensus 300 ELerAl~l~ga~iIGIN 316 (355)
+++.+.++ |++.|.+.
T Consensus 197 ~A~~a~~a-GAD~I~vG 212 (400)
T 3ffs_A 197 ATKELIEN-GADGIKVG 212 (400)
T ss_dssp HHHHHHHT-TCSEEEEC
T ss_pred HHHHHHHc-CCCEEEEe
Confidence 99999997 99999884
No 132
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=91.44 E-value=1.3 Score=39.14 Aligned_cols=59 Identities=12% Similarity=0.134 Sum_probs=45.0
Q ss_pred HHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeCC-------HHHHHHHhccCCCeEEEe
Q 018446 253 QIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHD-------EREMDRVLGIEGIELIGI 315 (355)
Q Consensus 253 QI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH~-------~eELerAl~l~ga~iIGI 315 (355)
.|..|..+||+.|.+.. +.+.++.+.++|.+.|+...+|-|. .+++.+.++. +.+-+|+
T Consensus 96 ~i~~A~~lGa~~v~~~~---~~~~~~~l~~~a~~~gv~l~~En~~~~~~~~~~~~~~~ll~~-~~~~~g~ 161 (262)
T 3p6l_A 96 MFKFAKAMDLEFITCEP---ALSDWDLVEKLSKQYNIKISVHNHPQPSDYWKPENLLKAISG-RSQSLGS 161 (262)
T ss_dssp HHHHHHHTTCSEEEECC---CGGGHHHHHHHHHHHTCEEEEECCSSSSSSSSHHHHHHHHTT-SCTTEEE
T ss_pred HHHHHHHcCCCEEEecC---CHHHHHHHHHHHHHhCCEEEEEeCCCccccCCHHHHHHHHHh-CCCceEE
Confidence 57778899999887753 4578899999999999999999885 3677777653 3344454
No 133
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=91.37 E-value=0.28 Score=47.85 Aligned_cols=70 Identities=26% Similarity=0.233 Sum_probs=56.6
Q ss_pred HHHHHHHHHcCceEEEEec----cCCCCCCCHHHHHHHHhcCC--CCCeeccccccCHHHHHHHHHcCCcchHHHHh
Q 018446 200 VEIARSYEKGGAACLSILT----DEKYFKGSFENLEAVRSAGV--KCPLLCKEFIVDAWQIYYARTKGADAVLLIAA 270 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLT----D~~fF~GS~edL~~VR~a~v--~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaa 270 (355)
.+.|+..+++||++|.|-- ...+..+.++.|..++++ + ++||+.-==|-++-++.+|.++|||+|.+=-.
T Consensus 240 ~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~-v~~~ipVia~GGI~~g~D~~kalalGAd~V~iGr~ 315 (368)
T 2nli_A 240 PEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAER-VNKRVPIVFDSGVRRGEHVAKALASGADVVALGRP 315 (368)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHH-HTTSSCEEECSSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHH-hCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHH
Confidence 3678888999999999932 223445678888899875 5 69999999999999999999999999986433
No 134
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=91.27 E-value=0.8 Score=43.79 Aligned_cols=101 Identities=8% Similarity=0.002 Sum_probs=78.9
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~ 276 (355)
..++++..++.|...| |+.+-..+++.+..+|+. +++||..-+-+.++.++.+....| +|.|.+=..-+ +-.+
T Consensus 207 a~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~ 281 (371)
T 2ovl_A 207 AIRAARALAPFDLHWI----EEPTIPDDLVGNARIVRE-SGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNIGGYTT 281 (371)
T ss_dssp HHHHHHHHGGGCCSEE----ECCSCTTCHHHHHHHHHH-HCSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTTTSHHH
T ss_pred HHHHHHHHHhcCCCEE----ECCCCcccHHHHHHHHhh-CCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCccccCCHHH
Confidence 4467788888887765 455666789999999986 799999999999999999987776 78887744444 5667
Q ss_pred HHHHHHHHHHcCCcEEEEeCCHHHHHHHhc
Q 018446 277 IRYMTKICKLLGLTALVEVHDEREMDRVLG 306 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH~~eELerAl~ 306 (355)
...+.++|+..|+.+.+ |+.-|....+.
T Consensus 282 ~~~i~~~A~~~gi~~~~--h~~~~a~~hla 309 (371)
T 2ovl_A 282 FRKVAALAEANNMLLTS--HGVHDLTVHAL 309 (371)
T ss_dssp HHHHHHHHHHTTCCEEE--CSCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEcc--ccHHHHHHHHH
Confidence 78899999999999776 77666554443
No 135
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=91.24 E-value=1.7 Score=39.32 Aligned_cols=126 Identities=17% Similarity=0.086 Sum_probs=82.6
Q ss_pred CceEEeEeeecCCCCCCCCCCCC-HHHHHHHHHHcCceEEEEeccCCCCCC-CHHHHHHHHhcCCCCC--eec-cccccC
Q 018446 176 LPALIAEVKKASPSRGILREDFD-PVEIARSYEKGGAACLSILTDEKYFKG-SFENLEAVRSAGVKCP--LLC-KEFIVD 250 (355)
Q Consensus 176 ~~aVIAEvKRaSPSkG~I~~~~D-p~~iA~~Ye~~GAaaISVLTD~~fF~G-S~edL~~VR~a~v~lP--VLr-KDFIId 250 (355)
+..+..|+|...... ...+ ...+++...+.|.. +.-.|+. +.+.|..+|+....+| .|. ..+..+
T Consensus 108 ~~~l~iEiK~~~~~~----~~~~~~~~v~~~l~~~~~~------~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~ 177 (258)
T 2o55_A 108 NLKLNLELKGEEWKR----KESGDHQRLLLLVEKYHMQ------ERVDYCSFHHEALAHLKALCPDVKITYLFNYMGQPT 177 (258)
T ss_dssp CCEEEEEECCSSSSS----TTSSHHHHHHHHHHTTTCG------GGEEEEESSHHHHHHHHHHCTTCEEEEECCTTSCCC
T ss_pred ceEEEEEEccCCccc----cchHHHHHHHHHHHHcCCC------CCEEEEeCCHHHHHHHHHHCCCCcEEEEEeCCCCCC
Confidence 467999999644210 1112 23566666666643 2222322 5788888887545565 344 444445
Q ss_pred HHHH-HHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEe-----CCHHHHHHHhccCCCeEEEee
Q 018446 251 AWQI-YYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEV-----HDEREMDRVLGIEGIELIGIN 316 (355)
Q Consensus 251 pyQI-~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEV-----H~~eELerAl~l~ga~iIGIN 316 (355)
+++. ..++..|+++|-.-...+++ .+++.+++.|+.+.+=. .+.+++++.+++ |++.|--|
T Consensus 178 ~~~~~~~~~~~~~~~v~~~~~~~~~----~~v~~~~~~G~~v~~wTv~~~~n~~~~~~~l~~~-GvdgI~TD 244 (258)
T 2o55_A 178 PLDFVEQACYGDANGVSMLFHYLTK----EQVCTAHEKGLSVTVWMPWIFDDSEEDWKKCLEL-QVDLICSN 244 (258)
T ss_dssp CTTHHHHHHHTTCSEEEEEGGGCCH----HHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHH-TCSEEEES
T ss_pred HHHHHHHHHhcCCeEEecChhhcCH----HHHHHHHHCCCEEEEeeCCCCCCCHHHHHHHHHc-CCCEEEeC
Confidence 5543 23778999998776667764 67899999999998765 589999999987 88877654
No 136
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=91.19 E-value=0.22 Score=47.88 Aligned_cols=90 Identities=24% Similarity=0.162 Sum_probs=70.1
Q ss_pred CHHHHHHHHHHcCceEEEEec---cCC----CCC-CCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHH
Q 018446 198 DPVEIARSYEKGGAACLSILT---DEK----YFK-GSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLI 268 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLT---D~~----fF~-GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLI 268 (355)
|..++|+.+++.|++.|.|-. ++. ... -.++.+..+|++ +++||+.---|-++.+..++...| ||+|-+-
T Consensus 240 ~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~-~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iG 318 (349)
T 3hgj_A 240 DTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKR-VGLRTGAVGLITTPEQAETLLQAGSADLVLLG 318 (349)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHH-HCCEEEECSSCCCHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHH-cCceEEEECCCCCHHHHHHHHHCCCceEEEec
Confidence 466889999999999999873 211 112 257788899986 899999999889999999999999 9999887
Q ss_pred HhcCCHHHHHHHHHHHHHcCCc
Q 018446 269 AAVLPDLDIRYMTKICKLLGLT 290 (355)
Q Consensus 269 aaiL~~~~L~~L~~~A~~LGLe 290 (355)
-++|.+-++ ..+.++.||.+
T Consensus 319 R~~lanPdl--~~k~~~~l~~~ 338 (349)
T 3hgj_A 319 RVLLRDPYF--PLRAAKALGVA 338 (349)
T ss_dssp THHHHCTTH--HHHHHHHTTCC
T ss_pred HHHHhCchH--HHHHHHHCCCC
Confidence 777765554 34777788854
No 137
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=91.16 E-value=0.3 Score=44.41 Aligned_cols=71 Identities=13% Similarity=0.164 Sum_probs=49.0
Q ss_pred HHHHHHHHHcCceEEEEeccC-------CCCCCCHHHHHHHHhcCCCCCeeccccccC-HHHHHHHHHcCCcchHHHHhc
Q 018446 200 VEIARSYEKGGAACLSILTDE-------KYFKGSFENLEAVRSAGVKCPLLCKEFIVD-AWQIYYARTKGADAVLLIAAV 271 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~-------~fF~GS~edL~~VR~a~v~lPVLrKDFIId-pyQI~eAr~~GADAVLLIaai 271 (355)
.+..+.+.+.+...+-+.|=. .+-...++.+..+|+. +++||+. +|.|. +-++.+...+|||+|..--++
T Consensus 156 ~e~~~~~~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~-~~~pI~v-gGGI~~~e~~~~~~~~GAdgvvVGSai 233 (262)
T 1rd5_A 156 EDRMKEITKASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKV-TNKPVAV-GFGISKPEHVKQIAQWGADGVIIGSAM 233 (262)
T ss_dssp HHHHHHHHHHCCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHH-CSSCEEE-ESCCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred HHHHHHHHhcCCCeEEEecCCCCCCCCcCCCchHHHHHHHHHhh-cCCeEEE-ECCcCCHHHHHHHHHcCCCEEEEChHH
Confidence 344455555555455554421 1111234577888886 7899887 99999 999999999999999887665
Q ss_pred C
Q 018446 272 L 272 (355)
Q Consensus 272 L 272 (355)
.
T Consensus 234 ~ 234 (262)
T 1rd5_A 234 V 234 (262)
T ss_dssp H
T ss_pred H
Confidence 5
No 138
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=91.13 E-value=0.22 Score=48.62 Aligned_cols=90 Identities=20% Similarity=0.265 Sum_probs=67.8
Q ss_pred CHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHH--h-cC--CHHHHHHHHHHHHHcCCcEEE--EeCCH
Q 018446 226 SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIA--A-VL--PDLDIRYMTKICKLLGLTALV--EVHDE 298 (355)
Q Consensus 226 S~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIa--a-iL--~~~~L~~L~~~A~~LGLeaLV--EVH~~ 298 (355)
+++.++.+|+. +++||+.|. +..+-.+..+..+|||+|.+.- . .+ ....+..+.++...++...+. -|++.
T Consensus 213 ~~~~i~~i~~~-~~~Pv~vkg-v~t~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~~~pVia~GGI~~~ 290 (380)
T 1p4c_A 213 NWEALRWLRDL-WPHKLLVKG-LLSAEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKTGKPVLIDSGFRRG 290 (380)
T ss_dssp CHHHHHHHHHH-CCSEEEEEE-ECCHHHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHHCSCEEECSSCCSH
T ss_pred cHHHHHHHHHh-cCCCEEEEe-cCcHHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHcCCeEEEECCCCCH
Confidence 47999999986 899999996 6789999999999999998821 1 11 011344555666667774443 28999
Q ss_pred HHHHHHhccCCCeEEEeeCC
Q 018446 299 REMDRVLGIEGIELIGINNR 318 (355)
Q Consensus 299 eELerAl~l~ga~iIGINNR 318 (355)
+++.+++.+ ||+.++|-.-
T Consensus 291 ~dv~kal~~-GAdaV~iGr~ 309 (380)
T 1p4c_A 291 SDIVKALAL-GAEAVLLGRA 309 (380)
T ss_dssp HHHHHHHHT-TCSCEEESHH
T ss_pred HHHHHHHHh-CCcHhhehHH
Confidence 999999997 9999998654
No 139
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=91.05 E-value=1.6 Score=41.89 Aligned_cols=65 Identities=12% Similarity=0.016 Sum_probs=52.9
Q ss_pred HHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCC
Q 018446 251 AWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNL 320 (355)
Q Consensus 251 pyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL 320 (355)
..++..+...|+|.|.+.....+. ++++..++.|+.+++.|+|.+++.++.+. |++.|.+.++..
T Consensus 112 ~~~~~~~~~~g~~~V~~~~g~~~~----~~i~~~~~~g~~v~~~v~t~~~a~~a~~~-GaD~i~v~g~~~ 176 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSFHFGVPDR----EVIARLRRAGTLTLVTATTPEEARAVEAA-GADAVIAQGVEA 176 (369)
T ss_dssp HHHHHHHHHSCCSEEEEESSCCCH----HHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCSEEEEECTTC
T ss_pred HHHHHHHHhcCCCEEEEeCCCCcH----HHHHHHHHCCCeEEEECCCHHHHHHHHHc-CCCEEEEeCCCc
Confidence 457888889999999887665443 34555667899999999999999999986 999999988754
No 140
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=90.97 E-value=0.7 Score=42.13 Aligned_cols=74 Identities=15% Similarity=0.069 Sum_probs=58.0
Q ss_pred HHHHHHHHcCceEEEE----eccC-CCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHH
Q 018446 201 EIARSYEKGGAACLSI----LTDE-KYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDL 275 (355)
Q Consensus 201 ~iA~~Ye~~GAaaISV----LTD~-~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~ 275 (355)
+.|+..++.||+.|.+ +|+. +-+.-+++.+..+++. ++||+.-==|-++-++.++..+|||+|++--++..+.
T Consensus 140 eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~--~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsai~~p~ 217 (229)
T 3q58_A 140 NEGISCHQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSHA--GCRVIAEGRYNTPALAANAIEHGAWAVTVGSAITRIE 217 (229)
T ss_dssp HHHHHHHHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHTT--TCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHCHH
T ss_pred HHHHHHHhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHHc--CCCEEEECCCCCHHHHHHHHHcCCCEEEEchHhcChH
Confidence 5667778899999975 2322 2356688999999874 8999976555589999999999999999988877664
Q ss_pred H
Q 018446 276 D 276 (355)
Q Consensus 276 ~ 276 (355)
+
T Consensus 218 ~ 218 (229)
T 3q58_A 218 H 218 (229)
T ss_dssp H
T ss_pred H
Confidence 3
No 141
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=90.54 E-value=0.77 Score=39.03 Aligned_cols=94 Identities=20% Similarity=0.186 Sum_probs=69.4
Q ss_pred CCHHHHHHHHHHcCceEEEEec--cCCCCCCC-HHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcC-
Q 018446 197 FDPVEIARSYEKGGAACLSILT--DEKYFKGS-FENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL- 272 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVLT--D~~fF~GS-~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL- 272 (355)
.++.++.+.+...|+..+-+.. ......|- .+.+..+++. +++|++.-.=+-++-++.++...|||+++..-++.
T Consensus 130 ~~~~~~i~~~~~~~~~~vli~~~~~~g~~~g~~~~~i~~~~~~-~~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a~~~ 208 (237)
T 3cwo_X 130 ILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF 208 (237)
T ss_dssp EEHHHHHHHHHHHTCSEEEEEETTTTTCCSCCCHHHHHHHGGG-CCSCEEEESCCCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred cCHHHHHHHHhhcCCCeEEEEecCCCCccccccHHHHHHHHHh-cCCCEEecCCCCCHHHHHHHHHcCcHHHhhhHHHHc
Confidence 4678888999888888665543 33333332 6778888775 79999988777789999999999999998777663
Q ss_pred CHHHHHHHHHHHHHcCCcE
Q 018446 273 PDLDIRYMTKICKLLGLTA 291 (355)
Q Consensus 273 ~~~~L~~L~~~A~~LGLea 291 (355)
.+-.++++.++..+.|...
T Consensus 209 ~~~~~~~~~~~l~~~~~~~ 227 (237)
T 3cwo_X 209 REIDVRELKEYLKKHGVNV 227 (237)
T ss_dssp TSSCHHHHHHHHHTTTCCC
T ss_pred CCCCHHHHHHHHHHCCCce
Confidence 3446777777777777643
No 142
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=90.41 E-value=0.53 Score=44.70 Aligned_cols=95 Identities=13% Similarity=0.206 Sum_probs=74.9
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcCC-HHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL~-~~~ 276 (355)
..++++..++.|...| |+.+-..+++.+..+|+. +++||..-+-+.++.++.+....| +|.|.+=..-++ -.+
T Consensus 205 a~~~~~~l~~~~i~~i----E~P~~~~~~~~~~~l~~~-~~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~ 279 (359)
T 1mdl_A 205 AIKRSQALQQEGVTWI----EEPTLQHDYEGHQRIQSK-LNVPVQMGENWLGPEEMFKALSIGACRLAMPDAMKIGGVTG 279 (359)
T ss_dssp HHHHHHHHHHHTCSCE----ECCSCTTCHHHHHHHHHT-CSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTTTHHHH
T ss_pred HHHHHHHHHHhCCCeE----ECCCChhhHHHHHHHHHh-CCCCEEeCCCCCCHHHHHHHHHcCCCCEEeecchhhCCHHH
Confidence 4467788888887765 455666789999999985 899999999999999999988776 788877555553 456
Q ss_pred HHHHHHHHHHcCCcEEEEeCCHHH
Q 018446 277 IRYMTKICKLLGLTALVEVHDERE 300 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH~~eE 300 (355)
...+.++|+..|+.+.+ |+..+
T Consensus 280 ~~~i~~~A~~~g~~~~~--~~~~~ 301 (359)
T 1mdl_A 280 WIRASALAQQFGIPMSS--HLFQE 301 (359)
T ss_dssp HHHHHHHHHHTTCCBCC--BSCHH
T ss_pred HHHHHHHHHHcCCeEee--ccHHH
Confidence 77889999999999665 45444
No 143
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=90.40 E-value=0.51 Score=42.04 Aligned_cols=63 Identities=16% Similarity=0.089 Sum_probs=46.2
Q ss_pred HHHHHHHcCCcchHHHHhcCCH------------HHHHHHHHHHHHcCCcEEEEeC------CHHHHHHHhccCCCeEEE
Q 018446 253 QIYYARTKGADAVLLIAAVLPD------------LDIRYMTKICKLLGLTALVEVH------DEREMDRVLGIEGIELIG 314 (355)
Q Consensus 253 QI~eAr~~GADAVLLIaaiL~~------------~~L~~L~~~A~~LGLeaLVEVH------~~eELerAl~l~ga~iIG 314 (355)
.|..|..+||..|.+.....+. +.|.++.++|.+.|+...+|-| +.+++.+.++.-+.+-+|
T Consensus 89 ~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~l~~~~~~~~vg 168 (286)
T 3dx5_A 89 LAILANWFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLETHPNTLTDTLPSTLELLGEVDHPNLK 168 (286)
T ss_dssp HHHHHHHHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTSTTSSHHHHHHHHHHHCCTTEE
T ss_pred HHHHHHHhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEecCCCcCcCCHHHHHHHHHhcCCCCeE
Confidence 5777889999998765544321 4577888999999999999999 678888777542333445
Q ss_pred e
Q 018446 315 I 315 (355)
Q Consensus 315 I 315 (355)
+
T Consensus 169 ~ 169 (286)
T 3dx5_A 169 I 169 (286)
T ss_dssp E
T ss_pred E
Confidence 4
No 144
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=90.40 E-value=1.3 Score=42.40 Aligned_cols=91 Identities=15% Similarity=0.183 Sum_probs=73.3
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccC-HHHHHHHHHcC-CcchHH-HHhcCCHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVD-AWQIYYARTKG-ADAVLL-IAAVLPDL 275 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIId-pyQI~eAr~~G-ADAVLL-IaaiL~~~ 275 (355)
..++++..++.|...| |+.+-..+++.+..+|+. +++||..-+-+.+ +.++.+....| +|.|.+ +..+=+-.
T Consensus 216 a~~~~~~l~~~~i~~i----E~P~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 290 (382)
T 1rvk_A 216 ALALGRGLEKLGFDWI----EEPMDEQSLSSYKWLSDN-LDIPVVGPESAAGKHWHRAEWIKAGACDILRTGVNDVGGIT 290 (382)
T ss_dssp HHHHHHHHHTTTCSEE----ECCSCTTCHHHHHHHHHH-CSSCEEECSSCSSHHHHHHHHHHTTCCSEEEECHHHHTSHH
T ss_pred HHHHHHHHHhcCCCEE----eCCCChhhHHHHHHHHhh-CCCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCchhcCCHH
Confidence 3467788888887754 455666789999999986 8999999999999 99999998877 688887 44443556
Q ss_pred HHHHHHHHHHHcCCcEEEE
Q 018446 276 DIRYMTKICKLLGLTALVE 294 (355)
Q Consensus 276 ~L~~L~~~A~~LGLeaLVE 294 (355)
+...+.++|+..|+.+.+-
T Consensus 291 ~~~~i~~~A~~~g~~~~~~ 309 (382)
T 1rvk_A 291 PALKTMHLAEAFGMECEVH 309 (382)
T ss_dssp HHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHcCCeEeec
Confidence 7788999999999997766
No 145
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=90.29 E-value=0.92 Score=43.87 Aligned_cols=97 Identities=15% Similarity=0.087 Sum_probs=76.2
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHH-HHhcCCHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLL-IAAVLPDLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLL-IaaiL~~~~ 276 (355)
..++++..++.|...| |+.+-..+++.+..+|+. +++||..-+-+.++.++.++...| +|.|.+ +..+=+-.+
T Consensus 223 a~~~~~~l~~~~i~~i----E~P~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~ 297 (393)
T 2og9_A 223 AQRMCRIFEPFNLVWI----EEPLDAYDHEGHAALALQ-FDTPIATGEMLTSAAEHGDLIRHRAADYLMPDAPRVGGITP 297 (393)
T ss_dssp HHHHHHHHGGGCCSCE----ECCSCTTCHHHHHHHHHH-CSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHHH
T ss_pred HHHHHHHHHhhCCCEE----ECCCCcccHHHHHHHHHh-CCCCEEeCCCcCCHHHHHHHHHCCCCCEEeeCccccCCHHH
Confidence 3467777788787654 455666789999999986 899999999999999999998887 788877 444435567
Q ss_pred HHHHHHHHHHcCCcEEEEeCCHHHHH
Q 018446 277 IRYMTKICKLLGLTALVEVHDEREMD 302 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH~~eELe 302 (355)
...+.++|+..|+.+. +|..-+.-
T Consensus 298 ~~~i~~~A~~~gi~~~--~h~~~~~~ 321 (393)
T 2og9_A 298 FLKIASLAEHAGLMLA--PHFAMELH 321 (393)
T ss_dssp HHHHHHHHHHTTCEEC--CCSCHHHH
T ss_pred HHHHHHHHHHcCCEEe--ccCccHHH
Confidence 7889999999999876 67655543
No 146
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=90.29 E-value=0.24 Score=49.79 Aligned_cols=74 Identities=15% Similarity=0.118 Sum_probs=59.1
Q ss_pred CHHHHHHHHHHcCceEEEEeccC----------CCCCC---------CHHHHHHHHhcCC--CCCeeccccccCHHHHHH
Q 018446 198 DPVEIARSYEKGGAACLSILTDE----------KYFKG---------SFENLEAVRSAGV--KCPLLCKEFIVDAWQIYY 256 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~----------~fF~G---------S~edL~~VR~a~v--~lPVLrKDFIIdpyQI~e 256 (355)
|..++|+..+++||++|.|-.-- ..++| +++.+..++++ + ++||+.-==|-++-++++
T Consensus 312 d~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~-v~~~iPVIg~GGI~s~~DA~e 390 (443)
T 1tv5_A 312 QKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNY-TNKQIPIIASGGIFSGLDALE 390 (443)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHH-TTTCSCEEEESSCCSHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHH-cCCCCcEEEECCCCCHHHHHH
Confidence 46778999999999999875421 11223 36788899886 6 899999999999999999
Q ss_pred HHHcCCcchHHHHhcC
Q 018446 257 ARTKGADAVLLIAAVL 272 (355)
Q Consensus 257 Ar~~GADAVLLIaaiL 272 (355)
+..+|||+|.+--+++
T Consensus 391 ~l~aGAd~Vqigrall 406 (443)
T 1tv5_A 391 KIEAGASVCQLYSCLV 406 (443)
T ss_dssp HHHTTEEEEEESHHHH
T ss_pred HHHcCCCEEEEcHHHH
Confidence 9999999997755544
No 147
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=90.22 E-value=0.34 Score=44.97 Aligned_cols=132 Identities=14% Similarity=0.082 Sum_probs=83.8
Q ss_pred CCCCHHHHHHHHHHcCceEEEEe-ccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCC
Q 018446 195 EDFDPVEIARSYEKGGAACLSIL-TDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (355)
Q Consensus 195 ~~~Dp~~iA~~Ye~~GAaaISVL-TD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~ 273 (355)
..-||.++|+.|.+.||..|=++ -|. .+.+.++.+++. +.+||-- +-.|...++.+.. +|||-|.+=.+++.
T Consensus 36 ~~~dp~~~A~~~~~~Ga~~l~vvDL~~----~n~~~i~~i~~~-~~~pv~v-gGGir~~~~~~~l-~Ga~~Viigs~a~~ 108 (260)
T 2agk_A 36 SQHPSSYYAKLYKDRDVQGCHVIKLGP----NNDDAAREALQE-SPQFLQV-GGGINDTNCLEWL-KWASKVIVTSWLFT 108 (260)
T ss_dssp -CCCHHHHHHHHHHTTCTTCEEEEESS----SCHHHHHHHHHH-STTTSEE-ESSCCTTTHHHHT-TTCSCEEECGGGBC
T ss_pred cCCCHHHHHHHHHHcCCCEEEEEeCCC----CCHHHHHHHHhc-CCceEEE-eCCCCHHHHHHHh-cCCCEEEECcHHHh
Confidence 34589999999999999987663 122 678999999886 8899875 4444444777777 99999999888776
Q ss_pred H------HHHHHHHHHHHHcC-------CcEE--------EEeC--------CHH-HHHHHhccCCCeEEEeeCCCCCcc
Q 018446 274 D------LDIRYMTKICKLLG-------LTAL--------VEVH--------DER-EMDRVLGIEGIELIGINNRNLETF 323 (355)
Q Consensus 274 ~------~~L~~L~~~A~~LG-------LeaL--------VEVH--------~~e-ELerAl~l~ga~iIGINNRdL~Tf 323 (355)
+ +.++++ ++.+| +++= |=++ +.. |+-+.+... +.-|-++.++-...
T Consensus 109 ~~g~~~p~~~~~~---~~~~g~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a~~~~~~-a~~il~t~i~~dG~ 184 (260)
T 2agk_A 109 KEGHFQLKRLERL---TELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTFRELRKY-TNEFLIHAADVEGL 184 (260)
T ss_dssp TTCCBCHHHHHHH---HHHHCGGGEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHHHHHTTT-CSEEEEEC------
T ss_pred hcCCCCHHHHHHH---HHHhCcCcEEEEEEeeecCCCceEEEEcCCccccCccHHHHHHHHHHHh-cCEEEEEeeccccC
Confidence 4 344444 44444 3321 1111 122 555555444 77777888877333
Q ss_pred --ccChhhHHhhhccc
Q 018446 324 --EVDNSNTKKLLEGE 337 (355)
Q Consensus 324 --evDl~~t~~L~~~~ 337 (355)
..|++...+|.+..
T Consensus 185 ~~G~d~eli~~l~~~~ 200 (260)
T 2agk_A 185 CGGIDELLVSKLFEWT 200 (260)
T ss_dssp -CCCCHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHhh
Confidence 25888888887653
No 148
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=90.18 E-value=0.52 Score=45.24 Aligned_cols=126 Identities=23% Similarity=0.325 Sum_probs=85.9
Q ss_pred HHHHHHHcCceEEEEeccCCCCCC---CHHHHHHHHhcCCCCCee------ccccccCHH-------HHHHHHHcCCcch
Q 018446 202 IARSYEKGGAACLSILTDEKYFKG---SFENLEAVRSAGVKCPLL------CKEFIVDAW-------QIYYARTKGADAV 265 (355)
Q Consensus 202 iA~~Ye~~GAaaISVLTD~~fF~G---S~edL~~VR~a~v~lPVL------rKDFIIdpy-------QI~eAr~~GADAV 265 (355)
=|..-+++||+-|=.+ +.-+.+| |+..++.+|+. +++||- --||+.+++ .|..++.+|||+|
T Consensus 51 ~a~~A~~gGAdRIELc-~~l~~GGlTPS~g~i~~a~~~-~~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~GAdGv 128 (287)
T 3iwp_A 51 SAVNAERGGADRIELC-SGLSEGGTTPSMGVLQVVKQS-VQIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLYGADGL 128 (287)
T ss_dssp HHHHHHHHTCSEEEEC-BCGGGTCBCCCHHHHHHHHTT-CCSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHhCCCEEEEC-CCCCCCCCCCCHHHHHHHHHh-cCCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHHcCCCEE
Confidence 3444567899999988 4455555 68999999985 789975 359999954 5778999999999
Q ss_pred HHHH----hcCCHHHHHHHHHHHHHcCCcEEEEeCCH--------HHHHHHhccCCCeEEEeeCCCCCccccChhhHHhh
Q 018446 266 LLIA----AVLPDLDIRYMTKICKLLGLTALVEVHDE--------REMDRVLGIEGIELIGINNRNLETFEVDNSNTKKL 333 (355)
Q Consensus 266 LLIa----aiL~~~~L~~L~~~A~~LGLeaLVEVH~~--------eELerAl~l~ga~iIGINNRdL~TfevDl~~t~~L 333 (355)
.+=+ .-++.+.++.|++.|..++++ .|-. +-++..+++ |++-|--.+-- .+-.-.++.-.+|
T Consensus 129 VfG~L~~dg~iD~~~~~~Li~~a~~l~vT----FHRAFD~~~d~~~Ale~Li~l-GvdrILTSG~~-~~a~~Gl~~Lk~L 202 (287)
T 3iwp_A 129 VFGALTEDGHIDKELCMSLMAICRPLPVT----FHRAFDMVHDPMAALETLLTL-GFERVLTSGCD-SSALEGLPLIKRL 202 (287)
T ss_dssp EECCBCTTSCBCHHHHHHHHHHHTTSCEE----ECGGGGGCSCHHHHHHHHHHH-TCSEEEECTTS-SSTTTTHHHHHHH
T ss_pred EEeeeCCCCCcCHHHHHHHHHHcCCCcEE----EECchhccCCHHHHHHHHHHc-CCCEEECCCCC-CChHHhHHHHHHH
Confidence 8753 346667899999988866533 4433 345566665 77777666642 2223344555555
Q ss_pred hc
Q 018446 334 LE 335 (355)
Q Consensus 334 ~~ 335 (355)
..
T Consensus 203 v~ 204 (287)
T 3iwp_A 203 IE 204 (287)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 149
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=90.17 E-value=0.89 Score=43.63 Aligned_cols=88 Identities=16% Similarity=0.128 Sum_probs=69.1
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~ 276 (355)
..++++.+++.|. .| -+| + . +++.+..+|+. +++||..-+-+.++.++.+....| +|.|.+=..-+ +-.+
T Consensus 205 a~~~~~~l~~~~i-~i---E~P-~-~-~~~~~~~l~~~-~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~ 276 (379)
T 2rdx_A 205 AIRLARATRDLDY-IL---EQP-C-R-SYEECQQVRRV-ADQPMKLDECVTGLHMAQRIVADRGAEICCLKISNLGGLSK 276 (379)
T ss_dssp HHHHHHHTTTSCC-EE---ECC-S-S-SHHHHHHHHTT-CCSCEEECTTCCSHHHHHHHHHHTCCSEEEEETTTTTSHHH
T ss_pred HHHHHHHHHhCCe-EE---eCC-c-C-CHHHHHHHHhh-CCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHH
Confidence 3456777777775 43 344 3 3 99999999985 899999999999999999987776 78888744444 5567
Q ss_pred HHHHHHHHHHcCCcEEEE
Q 018446 277 IRYMTKICKLLGLTALVE 294 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVE 294 (355)
...+.++|+..|+.+.+-
T Consensus 277 ~~~i~~~A~~~g~~~~~~ 294 (379)
T 2rdx_A 277 ARRTRDFLIDNRMPVVAE 294 (379)
T ss_dssp HHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHcCCeEEEe
Confidence 788999999999997766
No 150
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=89.92 E-value=0.46 Score=42.93 Aligned_cols=64 Identities=16% Similarity=0.145 Sum_probs=52.4
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCC--CHHHHHHHHhcCC--CCCeeccccccCHHHHHHHHHcCCcc
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKG--SFENLEAVRSAGV--KCPLLCKEFIVDAWQIYYARTKGADA 264 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~G--S~edL~~VR~a~v--~lPVLrKDFIIdpyQI~eAr~~GADA 264 (355)
+..++|+..+++||++|-+.| .|+.| +++++..+++. + ++||..-==|-++-+..+...+|||.
T Consensus 133 ~~~~~a~~a~eaGad~I~tst--g~~~gga~~~~i~~v~~~-v~~~ipVia~GGI~t~~da~~~l~aGA~~ 200 (225)
T 1mzh_A 133 EIKKAVEICIEAGADFIKTST--GFAPRGTTLEEVRLIKSS-AKGRIKVKASGGIRDLETAISMIEAGADR 200 (225)
T ss_dssp HHHHHHHHHHHHTCSEEECCC--SCSSSCCCHHHHHHHHHH-HTTSSEEEEESSCCSHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHhCCCEEEECC--CCCCCCCCHHHHHHHHHH-hCCCCcEEEECCCCCHHHHHHHHHhCchH
Confidence 356788999999999995455 45445 78999999875 4 79999888788899999999999993
No 151
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=89.86 E-value=0.91 Score=43.89 Aligned_cols=93 Identities=10% Similarity=-0.021 Sum_probs=73.5
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~ 276 (355)
..++++.+++.|...| |+.+-..+++.+..+|+. +++||..-+-+.++.++.+....| +|.|.+=..-. +-.+
T Consensus 210 a~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~ 284 (391)
T 2qgy_A 210 TKSFLKEVSSFNPYWI----EEPVDGENISLLTEIKNT-FNMKVVTGEKQSGLVHFRELISRNAADIFNPDISGMGGLID 284 (391)
T ss_dssp HHHHHHHHGGGCCSEE----ECSSCTTCHHHHHHHHHH-CSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTSSCHHH
T ss_pred HHHHHHHHHhcCCCeE----eCCCChhhHHHHHHHHhh-CCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcchhCCHHH
Confidence 4467788888887755 445566789999999986 899999999999999999988877 78877734443 5667
Q ss_pred HHHHHHHHHHcCCcEEEEeCCH
Q 018446 277 IRYMTKICKLLGLTALVEVHDE 298 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH~~ 298 (355)
...+.++|+..|+.+. +|+.
T Consensus 285 ~~~i~~~A~~~gi~~~--~~~~ 304 (391)
T 2qgy_A 285 IIEISNEASNNGIFIS--PHCW 304 (391)
T ss_dssp HHHHHHHHHHTTCEEC--CBCC
T ss_pred HHHHHHHHHHCCCEEe--ccCC
Confidence 7889999999999855 5544
No 152
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=89.82 E-value=1.3 Score=42.16 Aligned_cols=92 Identities=11% Similarity=0.123 Sum_probs=73.0
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHH-HHhcCCHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLL-IAAVLPDLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLL-IaaiL~~~~ 276 (355)
..++++..++.|...| |+.+-..+++.+..+|+. +++||..-+-+.++.++.+....| +|.|.+ ...+=+-.+
T Consensus 204 a~~~~~~l~~~~i~~i----EqP~~~~~~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~ 278 (370)
T 1nu5_A 204 ASIWIPRLEEAGVELV----EQPVPRANFGALRRLTEQ-NGVAILADESLSSLSSAFELARDHAVDAFSLKLCNMGGIAN 278 (370)
T ss_dssp HHHHHHHHHHHTCCEE----ECCSCTTCHHHHHHHHHH-CSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHH
T ss_pred HHHHHHHHHhcCcceE----eCCCCcccHHHHHHHHHh-CCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEchhhcCCHHH
Confidence 3467778888886653 444566889999999986 899999999999999999998887 788877 444445667
Q ss_pred HHHHHHHHHHcCCcEEEEeCC
Q 018446 277 IRYMTKICKLLGLTALVEVHD 297 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH~ 297 (355)
...+.++|+..|+.+. +|+
T Consensus 279 ~~~i~~~A~~~g~~~~--~~~ 297 (370)
T 1nu5_A 279 TLKVAAVAEAAGISSY--GGT 297 (370)
T ss_dssp HHHHHHHHHHHTCEEE--ECC
T ss_pred HHHHHHHHHHcCCcEE--ecC
Confidence 7889999999999976 554
No 153
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=89.79 E-value=0.14 Score=52.07 Aligned_cols=73 Identities=15% Similarity=0.120 Sum_probs=50.6
Q ss_pred HHHHHHHHHcCceEEEE-------eccC---CCCCCCHHHHHHHHhc--CCCCCeeccccccCHHHHHHHHHcCCcchHH
Q 018446 200 VEIARSYEKGGAACLSI-------LTDE---KYFKGSFENLEAVRSA--GVKCPLLCKEFIVDAWQIYYARTKGADAVLL 267 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISV-------LTD~---~fF~GS~edL~~VR~a--~v~lPVLrKDFIIdpyQI~eAr~~GADAVLL 267 (355)
.+.|+...++||++|.| +|.. .+-...++.+..++++ ..++||+.-==|-++-+|..|.++|||+|.+
T Consensus 308 ~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GA~~V~v 387 (511)
T 3usb_A 308 AEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKALAAGAHVVML 387 (511)
T ss_dssp HHHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHhCchhhee
Confidence 46788999999999987 2211 0112225555554322 2579999877777999999999999999987
Q ss_pred HHhcC
Q 018446 268 IAAVL 272 (355)
Q Consensus 268 IaaiL 272 (355)
=-+++
T Consensus 388 Gs~~~ 392 (511)
T 3usb_A 388 GSMFA 392 (511)
T ss_dssp STTTT
T ss_pred cHHHh
Confidence 55543
No 154
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=89.71 E-value=1.2 Score=43.42 Aligned_cols=116 Identities=13% Similarity=0.063 Sum_probs=73.7
Q ss_pred HHHHHHHH---HcCceEEEEeccC------CCCCCCHH----HHHHHHhcCCCCCeecc---ccccCHHHHHHHH----H
Q 018446 200 VEIARSYE---KGGAACLSILTDE------KYFKGSFE----NLEAVRSAGVKCPLLCK---EFIVDAWQIYYAR----T 259 (355)
Q Consensus 200 ~~iA~~Ye---~~GAaaISVLTD~------~fF~GS~e----dL~~VR~a~v~lPVLrK---DFIIdpyQI~eAr----~ 259 (355)
.+.|+..+ +.|+++|=++.-- ..|+.+.+ .++.||++ +++||+.| |+ |.-++.++. .
T Consensus 142 ~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~-~~~PV~vKi~p~~--d~~~~~~~a~~~~~ 218 (354)
T 4ef8_A 142 VEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEV-YPHSFGVKMPPYF--DFAHFDAAAEILNE 218 (354)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHH-CCSCEEEEECCCC--SHHHHHHHHHHHHT
T ss_pred HHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHh-hCCCeEEEecCCC--CHHHHHHHHHHHHh
Confidence 34444443 5688898887531 23444544 45566775 78999877 54 555555543 5
Q ss_pred cC-CcchHHHHhc-----------------------CC-----HHHHHHHHHHHHHcC-CcEEE--EeCCHHHHHHHhcc
Q 018446 260 KG-ADAVLLIAAV-----------------------LP-----DLDIRYMTKICKLLG-LTALV--EVHDEREMDRVLGI 307 (355)
Q Consensus 260 ~G-ADAVLLIaai-----------------------L~-----~~~L~~L~~~A~~LG-LeaLV--EVH~~eELerAl~l 307 (355)
+| ||+|.++-.+ |+ +..++.+.++.+..+ +..+. -|+|.+++.+++.+
T Consensus 219 ~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII~~GGI~s~~da~~~l~a 298 (354)
T 4ef8_A 219 FPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLA 298 (354)
T ss_dssp CTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEESCCCSHHHHHHHHHH
T ss_pred CCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCEEEECCcCCHHHHHHHHHc
Confidence 66 9999764221 11 235666666666653 44443 47999999999986
Q ss_pred CCCeEEEeeCCC
Q 018446 308 EGIELIGINNRN 319 (355)
Q Consensus 308 ~ga~iIGINNRd 319 (355)
||+.|+|-.-.
T Consensus 299 -GAd~V~vgra~ 309 (354)
T 4ef8_A 299 -GASMVQVGTAL 309 (354)
T ss_dssp -TEEEEEECHHH
T ss_pred -CCCEEEEhHHH
Confidence 99999986543
No 155
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=89.70 E-value=1.5 Score=39.12 Aligned_cols=117 Identities=17% Similarity=0.161 Sum_probs=73.8
Q ss_pred CCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHh-cCCCCCeeccc---cc--cCH-----------HHHHHHHH
Q 018446 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRS-AGVKCPLLCKE---FI--VDA-----------WQIYYART 259 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~-a~v~lPVLrKD---FI--Idp-----------yQI~eAr~ 259 (355)
.++.+..+...+.|..+|-+.... +....+.+++..+ .+..++.++-. ++ .|+ ..|..|..
T Consensus 38 ~~~~~~l~~~~~~G~~~vEl~~~~--~~~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~ 115 (287)
T 3kws_A 38 ESLNEKLDFMEKLGVVGFEPGGGG--LAGRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGE 115 (287)
T ss_dssp SSHHHHHHHHHHTTCCEEECBSTT--CGGGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEecCCc--hHHHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 577788888888888888877662 3444555544432 23333333332 11 133 35777899
Q ss_pred cCCcchHHHHhc------CC---------HHHHHHHHHHHHHcCCcEEEEeCC---------HHHHHHHhccCCCeEEEe
Q 018446 260 KGADAVLLIAAV------LP---------DLDIRYMTKICKLLGLTALVEVHD---------EREMDRVLGIEGIELIGI 315 (355)
Q Consensus 260 ~GADAVLLIaai------L~---------~~~L~~L~~~A~~LGLeaLVEVH~---------~eELerAl~l~ga~iIGI 315 (355)
+||+.|.+.... ++ -+.|.++.++|.+.|+...+|-|+ .+++.+.++.-+.+-+|+
T Consensus 116 lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~~~~ll~~v~~~~vg~ 195 (287)
T 3kws_A 116 LGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEPLNRKECFYLRQVADAASLCRDINNPGVRC 195 (287)
T ss_dssp TTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECCCCTTTCSSCCCHHHHHHHHHHHCCTTEEE
T ss_pred cCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcccCcccCCHHHHHHHHHHcCCCCeeE
Confidence 999988765431 11 246788889999999999999774 667766665323333554
No 156
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=89.60 E-value=0.91 Score=44.46 Aligned_cols=71 Identities=20% Similarity=0.156 Sum_probs=54.5
Q ss_pred HHHHHHHHcCceEEEEecc--CCCC--CCCHHHHHHHHhcCC--CCCeeccccccCHHHHHHHHHcCCcchHHHHhcC
Q 018446 201 EIARSYEKGGAACLSILTD--EKYF--KGSFENLEAVRSAGV--KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (355)
Q Consensus 201 ~iA~~Ye~~GAaaISVLTD--~~fF--~GS~edL~~VR~a~v--~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL 272 (355)
+.|+..++.||++|.|--- ..+. ..+++-|..++++ + ++||+.-==|-++-++.+|.++|||+|.+=-.+|
T Consensus 229 e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~a-v~~~ipVia~GGI~~g~Dv~kaLalGA~aV~iGr~~l 305 (352)
T 3sgz_A 229 EDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAA-VKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPIL 305 (352)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHH-HTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHH-hCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHH
Confidence 5788888999999998321 1111 2346788888775 5 7999999999999999999999999998744443
No 157
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=89.53 E-value=0.91 Score=43.22 Aligned_cols=69 Identities=19% Similarity=0.146 Sum_probs=44.7
Q ss_pred cccc-ccCHHHHHHHHHcCCc--------chHHHHhcCCHHHH-------HHHHHHHHHcC--CcEEEEeCCHHHHHHHh
Q 018446 244 CKEF-IVDAWQIYYARTKGAD--------AVLLIAAVLPDLDI-------RYMTKICKLLG--LTALVEVHDEREMDRVL 305 (355)
Q Consensus 244 rKDF-IIdpyQI~eAr~~GAD--------AVLLIaaiL~~~~L-------~~L~~~A~~LG--LeaLVEVH~~eELerAl 305 (355)
||.. .+-.++-|.++.-|++ +|++ .+..+ +.+-.+.+.++ ....|||+|.+|+..|+
T Consensus 140 Rkt~p~~r~~e~~A~~~GG~~~hr~~l~d~vli-----k~~Hi~~~g~~~~ai~~~r~~~~~~~~i~vev~tlee~~~A~ 214 (299)
T 2jbm_A 140 RKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMV-----KDNHVVAAGGVEKAVRAARQAADFALKVEVECSSLQEAVQAA 214 (299)
T ss_dssp SCCCTTCHHHHHHHHHHTTCBCCCCSTTSSEEE-----CHHHHHHHTSHHHHHHHHHHHHTTTSCEEEEESSHHHHHHHH
T ss_pred CCCChhhHHHHHHHHHHCCCCceecCccceEEe-----cccHHHHcCCHHHHHHHHHHhCCcCCeEEEecCCHHHHHHHH
Confidence 4443 2334555667777887 6652 22222 12223333344 57899999999999999
Q ss_pred ccCCCeEEEeeCC
Q 018446 306 GIEGIELIGINNR 318 (355)
Q Consensus 306 ~l~ga~iIGINNR 318 (355)
.. |+++|++.|-
T Consensus 215 ~a-GaD~I~ld~~ 226 (299)
T 2jbm_A 215 EA-GADLVLLDNF 226 (299)
T ss_dssp HT-TCSEEEEESC
T ss_pred Hc-CCCEEEECCC
Confidence 96 9999999883
No 158
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=89.52 E-value=0.42 Score=46.24 Aligned_cols=90 Identities=23% Similarity=0.159 Sum_probs=69.8
Q ss_pred CHHHHHHHHHHcCceEEEEecc---CC----CCCC-CHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHH
Q 018446 198 DPVEIARSYEKGGAACLSILTD---EK----YFKG-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLI 268 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD---~~----fF~G-S~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLI 268 (355)
|..++|+.+++.|++.|.|-.- +. +..| ..+.+..+|++ +++||+.---|-++.+..++...| ||.|-+-
T Consensus 247 ~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~-~~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iG 325 (363)
T 3l5l_A 247 ESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRRE-AKLPVTSAWGFGTPQLAEAALQANQLDLVSVG 325 (363)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH-HTCCEEECSSTTSHHHHHHHHHTTSCSEEECC
T ss_pred HHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHH-cCCcEEEeCCCCCHHHHHHHHHCCCccEEEec
Confidence 5678899999999999998641 11 1122 46778899986 899999998888999999999999 9999887
Q ss_pred HhcCCHHHHHHHHHHHHHcCCc
Q 018446 269 AAVLPDLDIRYMTKICKLLGLT 290 (355)
Q Consensus 269 aaiL~~~~L~~L~~~A~~LGLe 290 (355)
-++|.+-+| ..++++.||.+
T Consensus 326 R~~lanPdl--~~k~~~~lg~~ 345 (363)
T 3l5l_A 326 RAHLADPHW--AYFAAKELGVE 345 (363)
T ss_dssp HHHHHCTTH--HHHHHHHTTCT
T ss_pred HHHHhCchH--HHHHHHHcCCC
Confidence 777765454 34677788853
No 159
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=89.52 E-value=0.43 Score=47.00 Aligned_cols=72 Identities=18% Similarity=0.154 Sum_probs=54.7
Q ss_pred HHHHHHHHHcCceEEEEe--ccCCCC--CCCHHHHHHHHhcCC--CCCeeccccccCHHHHHHHHHcCCcchHHHHhcC
Q 018446 200 VEIARSYEKGGAACLSIL--TDEKYF--KGSFENLEAVRSAGV--KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVL--TD~~fF--~GS~edL~~VR~a~v--~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL 272 (355)
.+.|+..+++||++|.|= .-...+ ...++-|..++++ + ++||+.-==|-++-++.+|.++|||+|.+=-.+|
T Consensus 263 ~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~a-v~~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~l 340 (392)
T 2nzl_A 263 GDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEA-VEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIV 340 (392)
T ss_dssp HHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHH-HTTSSEEEECSSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHH-cCCCCEEEEECCCCCHHHHHHHHHhCCCeeEECHHHH
Confidence 356889999999999992 111112 2346778888875 4 5999999999999999999999999997644333
No 160
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=89.49 E-value=0.43 Score=51.94 Aligned_cols=92 Identities=22% Similarity=0.174 Sum_probs=68.7
Q ss_pred CHHHHHHHHHHcCceEEEEe------------------------ccCCCCCCC------HHHHHHHHhcCC-CCCeeccc
Q 018446 198 DPVEIARSYEKGGAACLSIL------------------------TDEKYFKGS------FENLEAVRSAGV-KCPLLCKE 246 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVL------------------------TD~~fF~GS------~edL~~VR~a~v-~lPVLrKD 246 (355)
|..++|+..+++||++|+|- +....+.|. ++.+..++++ + ++||+.-=
T Consensus 716 ~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~-~~~ipvi~~G 794 (1025)
T 1gte_A 716 DIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARA-LPGFPILATG 794 (1025)
T ss_dssp CHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHH-STTCCEEEES
T ss_pred HHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHH-cCCCCEEEec
Confidence 78999999999999999992 111112232 4678888886 6 89999999
Q ss_pred cccCHHHHHHHHHcCCcchHHHHhcCC--H----HHHHHHHHHHHHcCCc
Q 018446 247 FIVDAWQIYYARTKGADAVLLIAAVLP--D----LDIRYMTKICKLLGLT 290 (355)
Q Consensus 247 FIIdpyQI~eAr~~GADAVLLIaaiL~--~----~~L~~L~~~A~~LGLe 290 (355)
=|-++-++.++..+|||+|.+--++|. . +-+.+|-.+...+|..
T Consensus 795 GI~s~~da~~~l~~Ga~~v~vg~~~l~~~~~~~~~~~~~l~~~l~~~G~~ 844 (1025)
T 1gte_A 795 GIDSAESGLQFLHSGASVLQVCSAVQNQDFTVIQDYCTGLKALLYLKSIE 844 (1025)
T ss_dssp SCCSHHHHHHHHHTTCSEEEESHHHHTSCTTHHHHHHHHHHHHHHHTTCG
T ss_pred CcCCHHHHHHHHHcCCCEEEEeeccccCCccHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999998777763 2 2233445556666764
No 161
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=89.48 E-value=0.4 Score=43.92 Aligned_cols=137 Identities=20% Similarity=0.190 Sum_probs=91.2
Q ss_pred CCCHHHHHHHHHHcCceEEEEeccCCCCCCC---HHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcC
Q 018446 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGS---FENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (355)
Q Consensus 196 ~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS---~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL 272 (355)
.-||.++|+.|.+.||.-|-|+=-...+.|. ++-++.+.+. +.+|+--===|-+.-++.....+|||-|.+-.+++
T Consensus 30 ~~dP~~~a~~~~~~gad~lhvvDld~a~~~~~~~~~~i~~i~~~-~~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~ 108 (243)
T 4gj1_A 30 KYNPLKKFKEYEKAGAKELHLVDLTGAKDPSKRQFALIEKLAKE-VSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAI 108 (243)
T ss_dssp CCCHHHHHHHHHHHTCCEEEEEEHHHHHCGGGCCHHHHHHHHHH-CCSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTT
T ss_pred CCCHHHHHHHHHHCCCCEEEEEecCcccccchhHHHHHHHHHHh-cCCCeEeccccccHHHHHHHHHcCCCEEEEccccc
Confidence 3589999999999999998877433333343 4566677665 78898776667788899999999999999988777
Q ss_pred CHHHHHHHHHHHHHcCCcEEE---E----------eCC---------HHHHHHHhccCCCeEEEeeCC--CCCccccChh
Q 018446 273 PDLDIRYMTKICKLLGLTALV---E----------VHD---------EREMDRVLGIEGIELIGINNR--NLETFEVDNS 328 (355)
Q Consensus 273 ~~~~L~~L~~~A~~LGLeaLV---E----------VH~---------~eELerAl~l~ga~iIGINNR--dL~TfevDl~ 328 (355)
.+.++ +.+.+..+|=+.+| . +|. .+-+++..+. |+.=|-+|+= |=.---.|++
T Consensus 109 ~~p~l--i~e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~~-g~~eil~t~Id~DGt~~G~d~~ 185 (243)
T 4gj1_A 109 KDATL--CLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNK-GLKHILCTDISKDGTMQGVNVR 185 (243)
T ss_dssp TCHHH--HHHHHHHHCTTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHTT-TCCEEEEEETTC-----CCCHH
T ss_pred cCCch--HHHHHhcccCceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhhc-CCcEEEeeeecccccccCCCHH
Confidence 66443 34667777755433 1 121 2335555554 7777777744 4334446777
Q ss_pred hHHhhhcc
Q 018446 329 NTKKLLEG 336 (355)
Q Consensus 329 ~t~~L~~~ 336 (355)
...+|.+.
T Consensus 186 l~~~l~~~ 193 (243)
T 4gj1_A 186 LYKLIHEI 193 (243)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 77777654
No 162
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=89.42 E-value=1 Score=41.47 Aligned_cols=43 Identities=21% Similarity=0.210 Sum_probs=37.3
Q ss_pred HHHHHHHHhcCCCCCeeccccccC-HHHHHHHHHcCCcchHHHHhc
Q 018446 227 FENLEAVRSAGVKCPLLCKEFIVD-AWQIYYARTKGADAVLLIAAV 271 (355)
Q Consensus 227 ~edL~~VR~a~v~lPVLrKDFIId-pyQI~eAr~~GADAVLLIaai 271 (355)
.+.++.+|+. +++||.. ||.|+ +-|+.++...|||+|..=-++
T Consensus 194 ~~~i~~lr~~-~~~pi~v-ggGI~t~e~~~~~~~agAD~vVVGSai 237 (268)
T 1qop_A 194 HHLIEKLKEY-HAAPALQ-GFGISSPEQVSAAVRAGAAGAISGSAI 237 (268)
T ss_dssp HHHHHHHHHT-TCCCEEE-ESSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred HHHHHHHHhc-cCCcEEE-ECCCCCHHHHHHHHHcCCCEEEEChHH
Confidence 7899999986 7899776 99998 999999999999999874444
No 163
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=89.26 E-value=0.63 Score=40.70 Aligned_cols=74 Identities=23% Similarity=0.202 Sum_probs=54.7
Q ss_pred CHHHHHHHHHHcCceEEEE---e-ccCC---CCCCCHHHHHHHHhcCCC-CCeeccccccCHHHHHHHHHcCCcchHHHH
Q 018446 198 DPVEIARSYEKGGAACLSI---L-TDEK---YFKGSFENLEAVRSAGVK-CPLLCKEFIVDAWQIYYARTKGADAVLLIA 269 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISV---L-TD~~---fF~GS~edL~~VR~a~v~-lPVLrKDFIIdpyQI~eAr~~GADAVLLIa 269 (355)
++.++ ..+.+.||+.+-+ . |..+ +-..+++.+..+++. ++ +||+. ...|.+-.+.++..+|||+|.+.-
T Consensus 125 t~~e~-~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~-~~~~pvia-~GGI~~~nv~~~~~~Ga~gv~vgs 201 (227)
T 2tps_A 125 TMSEV-KQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQ-GISIPIVG-IGGITIDNAAPVIQAGADGVSMIS 201 (227)
T ss_dssp SHHHH-HHHHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHT-TCCCCEEE-ESSCCTTTSHHHHHTTCSEEEESH
T ss_pred CHHHH-HHHHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHh-CCCCCEEE-EcCCCHHHHHHHHHcCCCEEEEhH
Confidence 56664 4455679999886 2 2211 122368899999885 67 99766 788999999999999999999988
Q ss_pred hcCCH
Q 018446 270 AVLPD 274 (355)
Q Consensus 270 aiL~~ 274 (355)
++...
T Consensus 202 ~i~~~ 206 (227)
T 2tps_A 202 AISQA 206 (227)
T ss_dssp HHHTS
T ss_pred HhhcC
Confidence 88753
No 164
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=89.26 E-value=1.1 Score=43.36 Aligned_cols=92 Identities=11% Similarity=0.091 Sum_probs=73.2
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHh-cCCCCCeeccccccCHHHHHHHHHcC-CcchHH-HHhcCCHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRS-AGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLL-IAAVLPDL 275 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~-a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLL-IaaiL~~~ 275 (355)
..++++..++.|...| |..+-..+++.+..+++ . +++||..-+-+.++.++.+....| +|+|.+ +..+=+-.
T Consensus 211 a~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~~-~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 285 (401)
T 2hzg_A 211 AAARLPTLDAAGVLWL----EEPFDAGALAAHAALAGRG-ARVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGRIGGLG 285 (401)
T ss_dssp HHTTHHHHHHTTCSEE----ECCSCTTCHHHHHHHHTTC-CSSEEEECTTCSSHHHHHHHHHHSCCSEEEECHHHHTSHH
T ss_pred HHHHHHHHHhcCCCEE----ECCCCccCHHHHHHHHhhC-CCCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcchhCCHH
Confidence 3457788888887765 45566678999999997 6 799999999999999999888776 788877 44443556
Q ss_pred HHHHHHHHHHHcCCcEEEEeCC
Q 018446 276 DIRYMTKICKLLGLTALVEVHD 297 (355)
Q Consensus 276 ~L~~L~~~A~~LGLeaLVEVH~ 297 (355)
+...+.++|+..|+.+. +|+
T Consensus 286 ~~~~i~~~A~~~g~~~~--~h~ 305 (401)
T 2hzg_A 286 PAKRVADAAQARGITYV--NHT 305 (401)
T ss_dssp HHHHHHHHHHHHTCEEE--ECC
T ss_pred HHHHHHHHHHHcCCEEe--cCC
Confidence 77789999999999966 663
No 165
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=89.23 E-value=0.76 Score=44.31 Aligned_cols=92 Identities=11% Similarity=0.100 Sum_probs=72.5
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcCCHHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPDLDI 277 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL~~~~L 277 (355)
..++++..++.|...| |+.+-..+++.+..+|+. +++||..-+-+.++.++.++...| +|+|.+=..-=+-.+.
T Consensus 224 a~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~GGit~~ 298 (388)
T 2nql_A 224 ALELIAEMQPFDPWFA----EAPVWTEDIAGLEKVSKN-TDVPIAVGEEWRTHWDMRARIERCRIAIVQPEMGHKGITNF 298 (388)
T ss_dssp HHHHHHHHGGGCCSCE----ECCSCTTCHHHHHHHHTS-CCSCEEECTTCCSHHHHHHHHTTSCCSEECCCHHHHCHHHH
T ss_pred HHHHHHHHhhcCCCEE----ECCCChhhHHHHHHHHhh-CCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecCCCCCHHHH
Confidence 4467788888887755 455656789999999985 899999999999999999998877 7888772332345567
Q ss_pred HHHHHHHHHcCCcEEEEeCC
Q 018446 278 RYMTKICKLLGLTALVEVHD 297 (355)
Q Consensus 278 ~~L~~~A~~LGLeaLVEVH~ 297 (355)
..+.++|+..|+.+.+ |+
T Consensus 299 ~~i~~~A~~~g~~~~~--h~ 316 (388)
T 2nql_A 299 IRIGALAAEHGIDVIP--HA 316 (388)
T ss_dssp HHHHHHHHHHTCEECC--CC
T ss_pred HHHHHHHHHcCCeEEe--ec
Confidence 7889999999998766 73
No 166
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=89.21 E-value=1.2 Score=43.15 Aligned_cols=116 Identities=14% Similarity=0.083 Sum_probs=72.8
Q ss_pred HHHHHHHHHHcCce-EEEEeccC------CCCCCCHHHH----HHHHhcCCCCCeecc---ccccCHHHHHHH-HHcCCc
Q 018446 199 PVEIARSYEKGGAA-CLSILTDE------KYFKGSFENL----EAVRSAGVKCPLLCK---EFIVDAWQIYYA-RTKGAD 263 (355)
Q Consensus 199 p~~iA~~Ye~~GAa-aISVLTD~------~fF~GS~edL----~~VR~a~v~lPVLrK---DFIIdpyQI~eA-r~~GAD 263 (355)
..+.|+..++.|++ +|=++.-- ..|+.+.+.+ +.||++ +++||+.| | .|.-++.++ ..+|||
T Consensus 143 ~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~-~~~PV~vKi~p~--~~~~~~a~~~~~aga~ 219 (345)
T 3oix_A 143 THTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTY-FTKPLGIKLPPY--FDIVHFDQAAAIFNXY 219 (345)
T ss_dssp HHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTT-CCSCEEEEECCC--CCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHH-hCCCeEEEECCC--CCHHHHHHHHHHhCCC
Confidence 33444555556766 77776431 2344455444 455664 78999877 6 366776554 567999
Q ss_pred chHHHHhc------------------------CC-----HHHHHHHHHHHHHc--CCcEEE--EeCCHHHHHHHhccCCC
Q 018446 264 AVLLIAAV------------------------LP-----DLDIRYMTKICKLL--GLTALV--EVHDEREMDRVLGIEGI 310 (355)
Q Consensus 264 AVLLIaai------------------------L~-----~~~L~~L~~~A~~L--GLeaLV--EVH~~eELerAl~l~ga 310 (355)
+|-+|..+ |+ +..+..+.++.+.+ .+..+. -|+|.+++.+++.+ ||
T Consensus 220 ~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~a-GA 298 (345)
T 3oix_A 220 PLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILC-GA 298 (345)
T ss_dssp CCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHH-TC
T ss_pred ceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHh-CC
Confidence 98655322 11 11245566677777 354444 47999999999986 99
Q ss_pred eEEEeeCC
Q 018446 311 ELIGINNR 318 (355)
Q Consensus 311 ~iIGINNR 318 (355)
+.|+|---
T Consensus 299 d~V~igra 306 (345)
T 3oix_A 299 SMVQIGTA 306 (345)
T ss_dssp SEEEESHH
T ss_pred CEEEEChH
Confidence 99998543
No 167
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=89.08 E-value=0.47 Score=45.48 Aligned_cols=67 Identities=24% Similarity=0.272 Sum_probs=46.2
Q ss_pred CHHHHHHHHHcCC--------cchHH----HHhcCCHHHHHHHHHHHHHc--CCcEEEEeCCHHHHHHHhccCCCeEEEe
Q 018446 250 DAWQIYYARTKGA--------DAVLL----IAAVLPDLDIRYMTKICKLL--GLTALVEVHDEREMDRVLGIEGIELIGI 315 (355)
Q Consensus 250 dpyQI~eAr~~GA--------DAVLL----IaaiL~~~~L~~L~~~A~~L--GLeaLVEVH~~eELerAl~l~ga~iIGI 315 (355)
-..|-|-.+.-|+ |+||+ |+.. + .+..-++.+++. +....|||+|.+|++.|+.+ |+++|..
T Consensus 149 R~l~kyAV~~GGg~nHR~gL~d~vlikdNHi~~~-G--~i~~Av~~ar~~~~~~~IeVEv~tl~ea~eAl~a-GaD~I~L 224 (287)
T 3tqv_A 149 RLAQKYAVRCGGGFNHRIGLFDAYLIKENHIRSA-G--GIAKAVTKAKKLDSNKVVEVEVTNLDELNQAIAA-KADIVML 224 (287)
T ss_dssp HHHHHHHHHHTTCBCCCSSSSSSEEECTTTC-------CHHHHHHHHHHHCTTSCEEEEESSHHHHHHHHHT-TCSEEEE
T ss_pred HHHHHHHHHhcCchheeccCccEEEEeHHHHHHh-C--CHHHHHHHHHhhCCCCcEEEEeCCHHHHHHHHHc-CCCEEEE
Confidence 3466777777776 67666 3332 2 133444555554 47789999999999999997 9999999
Q ss_pred eCCCC
Q 018446 316 NNRNL 320 (355)
Q Consensus 316 NNRdL 320 (355)
.|-++
T Consensus 225 Dn~~~ 229 (287)
T 3tqv_A 225 DNFSG 229 (287)
T ss_dssp ESCCH
T ss_pred cCCCH
Confidence 99544
No 168
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=89.07 E-value=0.4 Score=48.87 Aligned_cols=69 Identities=14% Similarity=0.072 Sum_probs=53.6
Q ss_pred HHHHHHHHHcCceEEEEec--c--CCCCCCCHHHHHHHHhcCC-------CCCeeccccccCHHHHHHHHHcCCcchHHH
Q 018446 200 VEIARSYEKGGAACLSILT--D--EKYFKGSFENLEAVRSAGV-------KCPLLCKEFIVDAWQIYYARTKGADAVLLI 268 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLT--D--~~fF~GS~edL~~VR~a~v-------~lPVLrKDFIIdpyQI~eAr~~GADAVLLI 268 (355)
.+.|+..+++||++|.|=. - -......++.|..++++ + ++||+.-==|-++-++.+|.++|||+|.+=
T Consensus 354 ~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~-v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iG 432 (511)
T 1kbi_A 354 TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPI-LEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLG 432 (511)
T ss_dssp HHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHH-HHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHH-HHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 4678888999999999921 1 11122346788888775 4 799999999999999999999999999763
Q ss_pred H
Q 018446 269 A 269 (355)
Q Consensus 269 a 269 (355)
-
T Consensus 433 r 433 (511)
T 1kbi_A 433 R 433 (511)
T ss_dssp H
T ss_pred H
Confidence 3
No 169
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=88.99 E-value=0.44 Score=44.29 Aligned_cols=74 Identities=14% Similarity=0.069 Sum_probs=56.4
Q ss_pred CHHHHHHHHHHcC-ceEEEEec--------cCC----------CCC---C------CHHHHHHHHhcCC-CCCeeccccc
Q 018446 198 DPVEIARSYEKGG-AACLSILT--------DEK----------YFK---G------SFENLEAVRSAGV-KCPLLCKEFI 248 (355)
Q Consensus 198 Dp~~iA~~Ye~~G-AaaISVLT--------D~~----------fF~---G------S~edL~~VR~a~v-~lPVLrKDFI 248 (355)
+..++|+..+++| |++|.|-. |.. .++ | +++.+..++++ + ++||+.-==|
T Consensus 175 ~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~-~~~ipvi~~GGI 253 (314)
T 2e6f_A 175 HFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRR-CPDKLVFGCGGV 253 (314)
T ss_dssp HHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHH-CTTSEEEEESSC
T ss_pred HHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHh-cCCCCEEEECCC
Confidence 3455688899999 99998642 210 122 3 37888999886 7 8999987777
Q ss_pred cCHHHHHHHHHcCCcchHHHHhcC
Q 018446 249 VDAWQIYYARTKGADAVLLIAAVL 272 (355)
Q Consensus 249 IdpyQI~eAr~~GADAVLLIaaiL 272 (355)
-++-++.++..+|||+|-+=-+++
T Consensus 254 ~~~~da~~~l~~GAd~V~ig~~~l 277 (314)
T 2e6f_A 254 YSGEDAFLHILAGASMVQVGTALQ 277 (314)
T ss_dssp CSHHHHHHHHHHTCSSEEECHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEchhhH
Confidence 789999999999999998766666
No 170
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=88.95 E-value=0.25 Score=47.98 Aligned_cols=77 Identities=17% Similarity=0.156 Sum_probs=60.5
Q ss_pred CCCCCCHHHHHHHHHHcCceEEEEe-------------ccCC------CCCC---------CHHHHHHHHhcCC--CCCe
Q 018446 193 LREDFDPVEIARSYEKGGAACLSIL-------------TDEK------YFKG---------SFENLEAVRSAGV--KCPL 242 (355)
Q Consensus 193 I~~~~Dp~~iA~~Ye~~GAaaISVL-------------TD~~------fF~G---------S~edL~~VR~a~v--~lPV 242 (355)
|++++|..++|+..+.+||++|+.. ++.. -++| +++.+..++++ + ++||
T Consensus 200 i~p~~~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~-~~~~ipI 278 (345)
T 3oix_A 200 LPPYFDIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKR-LNPSIQI 278 (345)
T ss_dssp ECCCCCHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTT-SCTTSEE
T ss_pred ECCCCCHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHH-cCCCCcE
Confidence 4556799999999999999887632 1111 1333 26888999986 6 7999
Q ss_pred eccccccCHHHHHHHHHcCCcchHHHHh
Q 018446 243 LCKEFIVDAWQIYYARTKGADAVLLIAA 270 (355)
Q Consensus 243 LrKDFIIdpyQI~eAr~~GADAVLLIaa 270 (355)
+.-==|-++-++.++..+|||+|.+=-+
T Consensus 279 Ig~GGI~s~~da~~~l~aGAd~V~igra 306 (345)
T 3oix_A 279 IGTGGVXTGRDAFEHILCGASMVQIGTA 306 (345)
T ss_dssp EEESSCCSHHHHHHHHHHTCSEEEESHH
T ss_pred EEECCCCChHHHHHHHHhCCCEEEEChH
Confidence 9999999999999999999999987555
No 171
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=88.94 E-value=0.13 Score=45.73 Aligned_cols=97 Identities=8% Similarity=-0.017 Sum_probs=63.1
Q ss_pred HHHHHHHHHcCceEEEEeccCCCCCCCHH-HHHHHHhc--CCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHH
Q 018446 200 VEIARSYEKGGAACLSILTDEKYFKGSFE-NLEAVRSA--GVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLD 276 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~fF~GS~e-dL~~VR~a--~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~ 276 (355)
.+.++...++|+.+|-+- ++. -+.+ .+..+++. ....|++-.| ++..|..+|||.|-| +.++
T Consensus 16 ~~~~~~a~~~Gv~~v~lr-~k~---~~~~~~~~~i~~l~~~~~~~livnd------~~~~A~~~gadgvhl-----~~~~ 80 (210)
T 3ceu_A 16 DKIITALFEEGLDILHLR-KPE---TPAMYSERLLTLIPEKYHRRIVTHE------HFYLKEEFNLMGIHL-----NARN 80 (210)
T ss_dssp HHHHHHHHHTTCCEEEEC-CSS---CCHHHHHHHHHHSCGGGGGGEEESS------CTTHHHHTTCSEEEC-----CSSS
T ss_pred HHHHHHHHHCCCCEEEEc-cCC---CCHHHHHHHHHHHHHHhCCeEEEeC------CHHHHHHcCCCEEEE-----Cccc
Confidence 467777788999999654 543 2333 33344432 1234554443 336788999999944 4433
Q ss_pred HHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeC
Q 018446 277 IRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINN 317 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINN 317 (355)
+. .+...++-..+-+||.+|+.+|. . |++.|++-.
T Consensus 81 ~~----~~~~~~~~ig~s~~t~~e~~~A~-~-GaDyv~~g~ 115 (210)
T 3ceu_A 81 PS----EPHDYAGHVSCSCHSVEEVKNRK-H-FYDYVFMSP 115 (210)
T ss_dssp CS----CCTTCCSEEEEEECSHHHHHTTG-G-GSSEEEECC
T ss_pred cc----cccccCCEEEEecCCHHHHHHHh-h-CCCEEEECC
Confidence 31 12224888889999999999997 6 999999643
No 172
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=88.76 E-value=0.22 Score=45.96 Aligned_cols=123 Identities=11% Similarity=0.015 Sum_probs=81.2
Q ss_pred cCCCCCCCCCCC-CHHHHHHHHHHcCceEEEEec-cCCCC---CCCHHHHHHHHhcCC--CCCeeccccccCHHHHHHHH
Q 018446 186 ASPSRGILREDF-DPVEIARSYEKGGAACLSILT-DEKYF---KGSFENLEAVRSAGV--KCPLLCKEFIVDAWQIYYAR 258 (355)
Q Consensus 186 aSPSkG~I~~~~-Dp~~iA~~Ye~~GAaaISVLT-D~~fF---~GS~edL~~VR~a~v--~lPVLrKDFIIdpyQI~eAr 258 (355)
-||| ++.-|| +..+..+..+++||+.+=+=. |..|. .=.+..++.+|+. + ++.++..|- .+.+..+.
T Consensus 16 i~ps--ila~D~~~l~~~i~~~~~~gad~lhvDvmDG~fvpn~t~G~~~v~~lr~~-~~~DvhLMv~~p---~~~i~~~~ 89 (237)
T 3cu2_A 16 LSVG--ILSANWLQLNEEVTTLLENQINVLHFDIADGQFSSLFTVGAIGIKYFPTH-CFKDVHLMVRNQ---LEVAKAVV 89 (237)
T ss_dssp EEEE--GGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCTHHHHTSCTT-SEEEEEEECSCH---HHHHHHHH
T ss_pred EEEe--eeeCCcccHHHHHHHHHHcCCCEEEEEEecCccccchhhhHHHHHHHhhh-CCCCeEEEEECH---HHHHHHHH
Confidence 4676 356555 566777888899999854332 54433 2223667777653 3 333332221 35678889
Q ss_pred HcCCcchHHHHhcCCHHHHHHHHHHHHHc---------CCcEEEEe--CCHHHHHHHhccCCCeEEEeeC
Q 018446 259 TKGADAVLLIAAVLPDLDIRYMTKICKLL---------GLTALVEV--HDEREMDRVLGIEGIELIGINN 317 (355)
Q Consensus 259 ~~GADAVLLIaaiL~~~~L~~L~~~A~~L---------GLeaLVEV--H~~eELerAl~l~ga~iIGINN 317 (355)
.+|||.|.+.+..- ..+...++.++++ |+.+-|.+ +|..|.-+.+. ++++.|++=.
T Consensus 90 ~aGAd~itvH~ea~--~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~l~~~l-~~~D~vlvMs 156 (237)
T 3cu2_A 90 ANGANLVTLQLEQY--HDFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEPYL-DQIDVIQLLT 156 (237)
T ss_dssp HTTCSEEEEETTCT--TSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGTTTT-TTCSEEEEES
T ss_pred HcCCCEEEEecCCc--ccHHHHHHHHHhcccccccccCCceEEEEEeCCChHHHHHHHh-hcCceeeeee
Confidence 99999988877664 3588899999999 99999999 56555444333 3789997733
No 173
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=88.68 E-value=0.84 Score=40.52 Aligned_cols=64 Identities=19% Similarity=0.283 Sum_probs=47.9
Q ss_pred HHHHHHHHcCCcchHHHHhcCCH-HHHHHHHHHHHHcCCcEEEEeCC------HHHHHHHhccC---CCeEEEee
Q 018446 252 WQIYYARTKGADAVLLIAAVLPD-LDIRYMTKICKLLGLTALVEVHD------EREMDRVLGIE---GIELIGIN 316 (355)
Q Consensus 252 yQI~eAr~~GADAVLLIaaiL~~-~~L~~L~~~A~~LGLeaLVEVH~------~eELerAl~l~---ga~iIGIN 316 (355)
-.|..|..+||..|.+...-... ..|..+.++|.+.|+...+|-|. .+++.+.++.- +.+ +|++
T Consensus 88 ~~i~~A~~lGa~~v~~~~g~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~ll~~v~~~~~~-vg~~ 161 (264)
T 1yx1_A 88 PTLRRAEACGAGWLKVSLGLLPEQPDLAALGRRLARHGLQLLVENDQTPQGGRIEVLERFFRLAERQQLD-LAMT 161 (264)
T ss_dssp HHHHHHHHTTCSEEEEEEECCCSSCCHHHHHHHHTTSSCEEEEECCSSHHHHCHHHHHHHHHHHHHTTCS-EEEE
T ss_pred HHHHHHHHcCCCEEEEecCCCCcHHHHHHHHHHHHhcCCEEEEecCCCCCCCCHHHHHHHHHHHHhcCCC-eEEE
Confidence 45777889999988775544332 37899999999999999999985 47777766532 346 7774
No 174
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=88.68 E-value=1.1 Score=42.27 Aligned_cols=50 Identities=22% Similarity=0.407 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCcccc
Q 018446 274 DLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEV 325 (355)
Q Consensus 274 ~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~Tfev 325 (355)
.+.|+.|.++|+++||..+.|+||.+.++.+.++ ++++-|-.|++..+..
T Consensus 88 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~--vd~~kIgs~~~~n~~l 137 (276)
T 1vs1_A 88 LEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRY--ADMLQIGARNMQNFPL 137 (276)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHH--CSEEEECGGGTTCHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHh--CCeEEECcccccCHHH
Confidence 6789999999999999999999999999999886 7999999999987754
No 175
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=88.67 E-value=0.48 Score=40.87 Aligned_cols=74 Identities=23% Similarity=0.184 Sum_probs=54.6
Q ss_pred CHHHHHHHHHHcCceEEEEec--c----CCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhc
Q 018446 198 DPVEIARSYEKGGAACLSILT--D----EKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLT--D----~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaai 271 (355)
++.++. .+.+.||+.|-+-+ + +.+...+++.+..+++. .++||+. +..|.+-++.++..+|||+|.+.-++
T Consensus 117 t~~e~~-~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~pvia-~GGI~~~nv~~~~~~Ga~gv~vgs~i 193 (215)
T 1xi3_A 117 SLEEAL-EAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVES-VKIPVVA-IGGINKDNAREVLKTGVDGIAVISAV 193 (215)
T ss_dssp SHHHHH-HHHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHH-CSSCEEE-ESSCCTTTHHHHHTTTCSEEEESHHH
T ss_pred CHHHHH-HHHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHh-CCCCEEE-ECCcCHHHHHHHHHcCCCEEEEhHHH
Confidence 566644 45567999987632 1 11123367888888875 6899877 88999999999999999999988887
Q ss_pred CCH
Q 018446 272 LPD 274 (355)
Q Consensus 272 L~~ 274 (355)
...
T Consensus 194 ~~~ 196 (215)
T 1xi3_A 194 MGA 196 (215)
T ss_dssp HTS
T ss_pred hCC
Confidence 753
No 176
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=88.52 E-value=0.38 Score=44.08 Aligned_cols=128 Identities=10% Similarity=0.072 Sum_probs=88.7
Q ss_pred CCCCCCCCCCC-CHHHHHHHHHHcCceEE--EEeccCCC---CCCCHHHHHHHHhcCC-CCCeeccccccCHHHHHHHHH
Q 018446 187 SPSRGILREDF-DPVEIARSYEKGGAACL--SILTDEKY---FKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYART 259 (355)
Q Consensus 187 SPSkG~I~~~~-Dp~~iA~~Ye~~GAaaI--SVLTD~~f---F~GS~edL~~VR~a~v-~lPVLrKDFIIdpyQI~eAr~ 259 (355)
||| +++-|| +..+-.+..+++||+.+ =|. |..| +.=....++.+|+. + +.|+.+.=.|-||....+...
T Consensus 9 ~pS--ila~D~~~l~~~i~~~~~~g~d~iHvDvm-Dg~fvpn~t~G~~~v~~lr~~-~p~~~~dvhLmv~dp~~~i~~~~ 84 (227)
T 1tqx_A 9 APS--VLASNISKLAEETQRMESLGAEWIHLDVM-DMHFVPNLSFGPPVINNLKKY-TKSIFFDVHLMVEYPEKYVPLLK 84 (227)
T ss_dssp EEB--GGGSCGGGHHHHHHHHHHTTCSEEEEEEE-BSSSSSCBCCCHHHHHHHGGG-CSSCEEEEEEESSCGGGGGGGCT
T ss_pred Eee--hhcCChhhHHHHHHHHHHcCCCEEEEEEE-eCCcCcchhcCHHHHHHHHHh-CCCCcEEEEEEEcCHHHHHHHHH
Confidence 677 356554 66677778888899984 444 5442 33347889999986 6 789888777888776666666
Q ss_pred cCCcchHHHHhcCCHHHHHHHHH---HHHHcCCcEEEEeC--C-HHHHHHHhccCCCeEEEeeCCCC
Q 018446 260 KGADAVLLIAAVLPDLDIRYMTK---ICKLLGLTALVEVH--D-EREMDRVLGIEGIELIGINNRNL 320 (355)
Q Consensus 260 ~GADAVLLIaaiL~~~~L~~L~~---~A~~LGLeaLVEVH--~-~eELerAl~l~ga~iIGINNRdL 320 (355)
. ||.|...+..-. +.+...++ .++++|+.+-|.++ | .+.++..+.+..++.|.+=..|.
T Consensus 85 ~-Ad~itvH~ea~~-~~~~~~i~~~~~i~~~G~k~gvalnp~tp~~~~~~~l~~g~~D~VlvmsV~p 149 (227)
T 1tqx_A 85 T-SNQLTFHFEALN-EDTERCIQLAKEIRDNNLWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEP 149 (227)
T ss_dssp T-SSEEEEEGGGGT-TCHHHHHHHHHHHHTTTCEEEEEECTTSCGGGGHHHHTTTCCSEEEEESSCT
T ss_pred h-CCEEEEeecCCc-cCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHhhcCCcCEEEEeeecc
Confidence 6 999987776642 24677788 99999999999993 3 34556666531388884444443
No 177
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=88.46 E-value=2.2 Score=40.56 Aligned_cols=91 Identities=16% Similarity=0.239 Sum_probs=70.6
Q ss_pred HHHHHHHHHH--cCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHH-HHhcCCH
Q 018446 199 PVEIARSYEK--GGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLL-IAAVLPD 274 (355)
Q Consensus 199 p~~iA~~Ye~--~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLL-IaaiL~~ 274 (355)
..++++..++ .|...| |+.+-..+++.+..+|+. +++||..-+-+.++.++.+....| +|.|.+ +..+=+-
T Consensus 201 a~~~~~~l~~~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi 275 (366)
T 1tkk_A 201 AVTAIRKMEDAGLGIELV----EQPVHKDDLAGLKKVTDA-TDTPIMADESVFTPRQAFEVLQTRSADLINIKLMKAGGI 275 (366)
T ss_dssp HHHHHHHHHHTTCCEEEE----ECCSCTTCHHHHHHHHHH-CSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSH
T ss_pred HHHHHHHHhhcCCCceEE----ECCCCcccHHHHHHHHhh-CCCCEEEcCCCCCHHHHHHHHHhCCCCEEEeehhhhcCH
Confidence 3467777877 664433 444566899999999986 899999999999999999887766 788877 4444356
Q ss_pred HHHHHHHHHHHHcCCcEEEE
Q 018446 275 LDIRYMTKICKLLGLTALVE 294 (355)
Q Consensus 275 ~~L~~L~~~A~~LGLeaLVE 294 (355)
.+...+.++|+..|+.+.+-
T Consensus 276 t~~~~i~~~A~~~g~~~~~~ 295 (366)
T 1tkk_A 276 SGAEKINAMAEACGVECMVG 295 (366)
T ss_dssp HHHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHHHcCCcEEec
Confidence 67788999999999997654
No 178
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=88.45 E-value=0.76 Score=41.65 Aligned_cols=89 Identities=21% Similarity=0.249 Sum_probs=61.4
Q ss_pred ceEEeEeeecCCCCCC-CCCCCCH---HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccC--
Q 018446 177 PALIAEVKKASPSRGI-LREDFDP---VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVD-- 250 (355)
Q Consensus 177 ~aVIAEvKRaSPSkG~-I~~~~Dp---~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIId-- 250 (355)
..+|.|+- |. |. +..+.++ .+.++..++.||+.|.+- |.++++.+..+++. +++||+.-==|-.
T Consensus 146 ~~viv~~~---~~-G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~-----~~~~~~~l~~i~~~-~~ipvva~GGi~~~~ 215 (273)
T 2qjg_A 146 MPLIAMMY---PR-GKHIQNERDPELVAHAARLGAELGADIVKTS-----YTGDIDSFRDVVKG-CPAPVVVAGGPKTNT 215 (273)
T ss_dssp CCEEEEEE---EC-STTCSCTTCHHHHHHHHHHHHHTTCSEEEEC-----CCSSHHHHHHHHHH-CSSCEEEECCSCCSS
T ss_pred CCEEEEeC---CC-CcccCCCCCHhHHHHHHHHHHHcCCCEEEEC-----CCCCHHHHHHHHHh-CCCCEEEEeCCCCCC
Confidence 34777763 32 33 2233444 455678889999988864 36889999999985 7899876432321
Q ss_pred HHH----HHHHHHcCCcchHHHHhcCCHH
Q 018446 251 AWQ----IYYARTKGADAVLLIAAVLPDL 275 (355)
Q Consensus 251 pyQ----I~eAr~~GADAVLLIaaiL~~~ 275 (355)
+-+ +.++..+|||+|...-+++...
T Consensus 216 ~~~~~~~~~~~~~~Ga~gv~vg~~i~~~~ 244 (273)
T 2qjg_A 216 DEEFLQMIKDAMEAGAAGVAVGRNIFQHD 244 (273)
T ss_dssp HHHHHHHHHHHHHHTCSEEECCHHHHTSS
T ss_pred HHHHHHHHHHHHHcCCcEEEeeHHhhCCC
Confidence 333 7788889999999988887543
No 179
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=88.31 E-value=1.2 Score=41.75 Aligned_cols=67 Identities=16% Similarity=0.261 Sum_probs=42.7
Q ss_pred cCHHHHHHHHHcCCc--------chHHH---HhcCCHHHHHHHHHHHHH-cC--CcEEEEeCCHHHHHHHhccCCCeEEE
Q 018446 249 VDAWQIYYARTKGAD--------AVLLI---AAVLPDLDIRYMTKICKL-LG--LTALVEVHDEREMDRVLGIEGIELIG 314 (355)
Q Consensus 249 IdpyQI~eAr~~GAD--------AVLLI---aaiL~~~~L~~L~~~A~~-LG--LeaLVEVH~~eELerAl~l~ga~iIG 314 (355)
+-.++-|.++.-|++ +|++- ....+. ...-++.+++ ++ +...|||+|.+|+..|+.. |+++|+
T Consensus 131 ~r~~~~~A~~~gG~~~hr~~l~d~vlik~~Hi~~~g~--~~~ai~~~r~~~~~~~~i~vev~tlee~~~A~~a-GaD~I~ 207 (273)
T 2b7n_A 131 LRIFEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKD--LKSFLTHARKNLPFTAKIEIECESFEEAKNAMNA-GADIVM 207 (273)
T ss_dssp CHHHHHHHHHTTTCCCCCSSTTTCEEECHHHHTTCSS--HHHHHHHHGGGSCTTCCEEEEESSHHHHHHHHHH-TCSEEE
T ss_pred hHHHHHHHHHhCCCcceEcCccceEEeeCCHHHHhCC--HHHHHHHHHHhCCCCceEEEEcCCHHHHHHHHHc-CCCEEE
Confidence 334555666667855 55521 111121 1223344444 44 5789999999999999996 999999
Q ss_pred eeCC
Q 018446 315 INNR 318 (355)
Q Consensus 315 INNR 318 (355)
+.|-
T Consensus 208 ld~~ 211 (273)
T 2b7n_A 208 CDNL 211 (273)
T ss_dssp EETC
T ss_pred ECCC
Confidence 9873
No 180
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=88.24 E-value=0.9 Score=41.99 Aligned_cols=71 Identities=25% Similarity=0.174 Sum_probs=51.6
Q ss_pred HHHHHHHHcCceEEEEe---ccCCCCCCCHHHHHHHHhcCCCCCeecccccc-CHHHHHHHHHcCCcchHHHHhcCC
Q 018446 201 EIARSYEKGGAACLSIL---TDEKYFKGSFENLEAVRSAGVKCPLLCKEFIV-DAWQIYYARTKGADAVLLIAAVLP 273 (355)
Q Consensus 201 ~iA~~Ye~~GAaaISVL---TD~~fF~GS~edL~~VR~a~v~lPVLrKDFII-dpyQI~eAr~~GADAVLLIaaiL~ 273 (355)
+.++..++.|+..|-.+ |....=..+.+.|+.+|+. +++||+. +|.| ++-|+.++..+|||+|+..-++..
T Consensus 138 ~~a~~~~~~gad~v~~~~~~~Gt~~~~~~~~~l~~i~~~-~~iPviv-~gGI~t~eda~~~~~~GAdgViVGSAi~~ 212 (264)
T 1xm3_A 138 VLARKLEELGVHAIMPGASPIGSGQGILNPLNLSFIIEQ-AKVPVIV-DAGIGSPKDAAYAMELGADGVLLNTAVSG 212 (264)
T ss_dssp HHHHHHHHHTCSCBEECSSSTTCCCCCSCHHHHHHHHHH-CSSCBEE-ESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHhCCCEEEECCcccCCCCCCCCHHHHHHHHhc-CCCCEEE-EeCCCCHHHHHHHHHcCCCEEEEcHHHhC
Confidence 35666777888887221 1111000148899999985 7999886 5777 599999999999999999888774
No 181
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=88.19 E-value=0.53 Score=45.89 Aligned_cols=72 Identities=25% Similarity=0.163 Sum_probs=54.0
Q ss_pred HHHHHHHHHcCceEEEEec--cCC--CCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcC
Q 018446 200 VEIARSYEKGGAACLSILT--DEK--YFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLT--D~~--fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL 272 (355)
.+.|+...++||++|.|-. ... +-..+++.|..++++ ++.||+.-==|-++-.+.++..+|||+|.+=-++|
T Consensus 236 ~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~-~~~pVia~GGI~~~~dv~kal~~GAdaV~iGr~~l 311 (380)
T 1p4c_A 236 AEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAK-TGKPVLIDSGFRRGSDIVKALALGAEAVLLGRATL 311 (380)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHH-HCSCEEECSSCCSHHHHHHHHHTTCSCEEESHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHH-cCCeEEEECCCCCHHHHHHHHHhCCcHhhehHHHH
Confidence 3578888999999999921 111 112236778888875 67899988888899999999999999997644443
No 182
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=88.18 E-value=1.2 Score=48.47 Aligned_cols=116 Identities=23% Similarity=0.263 Sum_probs=76.1
Q ss_pred HHHHHHHHHcCceEEEEeccCCC------CCCC--------HHHHHHHHhcCCCCCeecccc--ccCHHHHH-HHHHcCC
Q 018446 200 VEIARSYEKGGAACLSILTDEKY------FKGS--------FENLEAVRSAGVKCPLLCKEF--IVDAWQIY-YARTKGA 262 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~f------F~GS--------~edL~~VR~a~v~lPVLrKDF--IIdpyQI~-eAr~~GA 262 (355)
.+.|+..+++||++|-+.-.-.. ++++ .+.+..+|++ +++||+.|=- +.|..++. .+..+||
T Consensus 651 ~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~-~~~Pv~vK~~~~~~~~~~~a~~~~~~G~ 729 (1025)
T 1gte_A 651 MELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQA-VQIPFFAKLTPNVTDIVSIARAAKEGGA 729 (1025)
T ss_dssp HHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHH-CSSCEEEEECSCSSCHHHHHHHHHHHTC
T ss_pred HHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHh-hCCceEEEeCCChHHHHHHHHHHHHcCC
Confidence 34555666789999999754222 2333 3477788886 7999998721 12444543 4457899
Q ss_pred cchHHHHh--------------------------cC-CHHH----HHHHHHHHHHc-CCcEEE--EeCCHHHHHHHhccC
Q 018446 263 DAVLLIAA--------------------------VL-PDLD----IRYMTKICKLL-GLTALV--EVHDEREMDRVLGIE 308 (355)
Q Consensus 263 DAVLLIaa--------------------------iL-~~~~----L~~L~~~A~~L-GLeaLV--EVH~~eELerAl~l~ 308 (355)
|+|.++-. -+ ++.. +..+.+++..+ ++..+. -|+|.+++.+++.+
T Consensus 730 d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~GGI~s~~da~~~l~~- 808 (1025)
T 1gte_A 730 DGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFLHS- 808 (1025)
T ss_dssp SEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEEESSCCSHHHHHHHHHT-
T ss_pred CEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCEEEecCcCCHHHHHHHHHc-
Confidence 99988310 01 1111 44556667777 666666 48999999999996
Q ss_pred CCeEEEeeC
Q 018446 309 GIELIGINN 317 (355)
Q Consensus 309 ga~iIGINN 317 (355)
||+.|+|-.
T Consensus 809 Ga~~v~vg~ 817 (1025)
T 1gte_A 809 GASVLQVCS 817 (1025)
T ss_dssp TCSEEEESH
T ss_pred CCCEEEEee
Confidence 999999965
No 183
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=87.99 E-value=1.2 Score=42.71 Aligned_cols=89 Identities=12% Similarity=0.101 Sum_probs=71.5
Q ss_pred HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHH-HHhcCCHHHH
Q 018446 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLL-IAAVLPDLDI 277 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLL-IaaiL~~~~L 277 (355)
..+++.+++.|..-| |+.+-.++++.+..+|+. +++||..-+-+.+++++.+....| +|.|.+ +..+ +-.+.
T Consensus 202 ~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~-Git~~ 275 (367)
T 3dg3_A 202 LRAMREMADLDLLFA----EELCPADDVLSRRRLVGQ-LDMPFIADESVPTPADVTREVLGGSATAISIKTART-GFTGS 275 (367)
T ss_dssp HHHHHHTTTSCCSCE----ESCSCTTSHHHHHHHHHH-CSSCEEECTTCSSHHHHHHHHHHTSCSEEEECHHHH-TTHHH
T ss_pred HHHHHHHHHhCCCEE----ECCCCcccHHHHHHHHHh-CCCCEEecCCcCCHHHHHHHHHcCCCCEEEeehhhh-hHHHH
Confidence 456777777775443 344566889999999986 899999999999999999988777 788877 5566 77788
Q ss_pred HHHHHHHHHcCCcEEEE
Q 018446 278 RYMTKICKLLGLTALVE 294 (355)
Q Consensus 278 ~~L~~~A~~LGLeaLVE 294 (355)
..+..+|+..|+.+.+-
T Consensus 276 ~~ia~~A~~~gi~~~~~ 292 (367)
T 3dg3_A 276 TRVHHLAEGLGLDMVMG 292 (367)
T ss_dssp HHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHcCCeEEEC
Confidence 88999999999997653
No 184
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=87.95 E-value=0.71 Score=43.88 Aligned_cols=75 Identities=19% Similarity=0.139 Sum_probs=53.5
Q ss_pred CCHHHHHHHHHHcCceEEEEe-c-----------cCC------CCC--CCHHHHHHHHhcCCCCCeeccccccCHHHHHH
Q 018446 197 FDPVEIARSYEKGGAACLSIL-T-----------DEK------YFK--GSFENLEAVRSAGVKCPLLCKEFIVDAWQIYY 256 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVL-T-----------D~~------fF~--GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~e 256 (355)
+++ +.|+..+++||++|.|- + .+. ... -+.+.|..++++..++||+.-==|-++-++.+
T Consensus 190 ~~~-~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~k 268 (349)
T 1p0k_A 190 MSK-ASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIASGGLQDALDVAK 268 (349)
T ss_dssp CCH-HHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHH
T ss_pred CCH-HHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHH
Confidence 344 56888888999999984 1 110 121 24566777877523899988777778999999
Q ss_pred HHHcCCcchHHHHhcC
Q 018446 257 ARTKGADAVLLIAAVL 272 (355)
Q Consensus 257 Ar~~GADAVLLIaaiL 272 (355)
+..+|||+|.+=-+++
T Consensus 269 ~l~~GAd~V~iG~~~l 284 (349)
T 1p0k_A 269 AIALGASCTGMAGHFL 284 (349)
T ss_dssp HHHTTCSEEEECHHHH
T ss_pred HHHcCCCEEEEcHHHH
Confidence 9999999998755554
No 185
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=87.93 E-value=0.12 Score=52.00 Aligned_cols=74 Identities=14% Similarity=0.121 Sum_probs=56.1
Q ss_pred HHHHHHHHHcCceEEEEeccCCC------C--CC-----CHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchH
Q 018446 200 VEIARSYEKGGAACLSILTDEKY------F--KG-----SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVL 266 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~f------F--~G-----S~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVL 266 (355)
.+.|+..+++||++|.|-..+.. + -| .+..+..+++. +++||+.-==|-++..+.+|.++|||+|.
T Consensus 307 ~~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~-~~ipVia~GGI~~~~di~kala~GAd~V~ 385 (514)
T 1jcn_A 307 AAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARR-FGVPIIADGGIQTVGHVVKALALGASTVM 385 (514)
T ss_dssp HHHHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGG-GTCCEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhh-CCCCEEEECCCCCHHHHHHHHHcCCCeee
Confidence 45788889999999988221110 1 12 35667777775 78999988778899999999999999999
Q ss_pred HHHhcCCH
Q 018446 267 LIAAVLPD 274 (355)
Q Consensus 267 LIaaiL~~ 274 (355)
+--++|..
T Consensus 386 iG~~~l~~ 393 (514)
T 1jcn_A 386 MGSLLAAT 393 (514)
T ss_dssp ESTTTTTS
T ss_pred ECHHHHcC
Confidence 88777754
No 186
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=87.91 E-value=0.68 Score=45.34 Aligned_cols=74 Identities=15% Similarity=0.074 Sum_probs=51.4
Q ss_pred HHHHHHHHcCceEEEEeccCCC----------CCCCHHHHHHHHhc--CCCCCeeccccccCHHHHHHHHHcCCcchHHH
Q 018446 201 EIARSYEKGGAACLSILTDEKY----------FKGSFENLEAVRSA--GVKCPLLCKEFIVDAWQIYYARTKGADAVLLI 268 (355)
Q Consensus 201 ~iA~~Ye~~GAaaISVLTD~~f----------F~GS~edL~~VR~a--~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLI 268 (355)
+.|+..+++||++|-|=.++-. -...++.|..++++ .+++||+.-==|-++.+|.+|..+|||+|.+-
T Consensus 161 e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vG 240 (366)
T 4fo4_A 161 EGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVG 240 (366)
T ss_dssp HHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHcCCCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 5778888899999998211111 01123445555431 26899987555559999999999999999988
Q ss_pred HhcCCH
Q 018446 269 AAVLPD 274 (355)
Q Consensus 269 aaiL~~ 274 (355)
-+++..
T Consensus 241 s~f~~t 246 (366)
T 4fo4_A 241 SMFAGT 246 (366)
T ss_dssp TTTTTB
T ss_pred hHhhcC
Confidence 777754
No 187
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=87.89 E-value=2.5 Score=40.05 Aligned_cols=120 Identities=12% Similarity=0.179 Sum_probs=88.0
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhc----CC
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV----LP 273 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaai----L~ 273 (355)
+..++++.+.+.|++.|.+- |+-..+.+..+++. .+||+.+ +-+.-+...+..+|||+|++--.- .+
T Consensus 90 ~~~~~~~~~~~~g~d~V~l~-----~g~p~~~~~~l~~~--g~~v~~~--v~s~~~a~~a~~~GaD~i~v~g~~~GG~~G 160 (326)
T 3bo9_A 90 WADDLVKVCIEEKVPVVTFG-----AGNPTKYIRELKEN--GTKVIPV--VASDSLARMVERAGADAVIAEGMESGGHIG 160 (326)
T ss_dssp THHHHHHHHHHTTCSEEEEE-----SSCCHHHHHHHHHT--TCEEEEE--ESSHHHHHHHHHTTCSCEEEECTTSSEECC
T ss_pred CHHHHHHHHHHCCCCEEEEC-----CCCcHHHHHHHHHc--CCcEEEE--cCCHHHHHHHHHcCCCEEEEECCCCCccCC
Confidence 45778888889999999863 33346778888874 6788863 456777778889999998884311 11
Q ss_pred -HHHHHHHHHHHHHcCCcEEEE--eCCHHHHHHHhccCCCeEEEeeCCCCCccccCh
Q 018446 274 -DLDIRYMTKICKLLGLTALVE--VHDEREMDRVLGIEGIELIGINNRNLETFEVDN 327 (355)
Q Consensus 274 -~~~L~~L~~~A~~LGLeaLVE--VH~~eELerAl~l~ga~iIGINNRdL~TfevDl 327 (355)
...+..+-++...+++..++. ++|.+++.+++.+ ||+-+.|..+=+.+-+.+.
T Consensus 161 ~~~~~~ll~~i~~~~~iPviaaGGI~~~~dv~~al~~-GA~gV~vGs~~~~~~e~~~ 216 (326)
T 3bo9_A 161 EVTTFVLVNKVSRSVNIPVIAAGGIADGRGMAAAFAL-GAEAVQMGTRFVASVESDV 216 (326)
T ss_dssp SSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHH-TCSEEEESHHHHTBSSCCS
T ss_pred CccHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHh-CCCEEEechHHHcCccccc
Confidence 124444555666677776664 8999999999997 9999999999888877543
No 188
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=87.85 E-value=1.8 Score=41.78 Aligned_cols=91 Identities=15% Similarity=0.227 Sum_probs=71.3
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHH-HHhcCCHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLL-IAAVLPDLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLL-IaaiL~~~~ 276 (355)
..++++..++.|...| |+.+-..+++.+..+|+. +++||..-+-+.++.++.+....| +|.|.+ +..+=+-.+
T Consensus 205 a~~~~~~l~~~~i~~i----EqP~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~ 279 (397)
T 2qde_A 205 ALTTIRALEKYNLSKI----EQPLPAWDLDGMARLRGK-VATPIYADESAQELHDLLAIINKGAADGLMIKTQKAGGLLK 279 (397)
T ss_dssp HHHHHHHHGGGCCSCE----ECCSCTTCHHHHHHHHTT-CSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHH
T ss_pred HHHHHHHHHhCCCCEE----ECCCChhhHHHHHHHHhh-CCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHH
Confidence 3457777888787654 455666789999999985 899999999999999999888766 788877 444435557
Q ss_pred HHHHHHHHHHcCCcEEEE
Q 018446 277 IRYMTKICKLLGLTALVE 294 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVE 294 (355)
...+.++|+..|+.+.+-
T Consensus 280 ~~~i~~~A~~~g~~~~~~ 297 (397)
T 2qde_A 280 AQRWLTLARLANLPVICG 297 (397)
T ss_dssp HHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHcCCeEEEe
Confidence 788999999999996543
No 189
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=87.84 E-value=1.7 Score=42.22 Aligned_cols=97 Identities=13% Similarity=0.058 Sum_probs=75.8
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHH-HHhcCCHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLL-IAAVLPDLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLL-IaaiL~~~~ 276 (355)
..++++..++.|...| |+.+-..+++.+..+|+. +++||..-+-+.++.++.+....| +|.|.+ +..+=+-.+
T Consensus 236 ai~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite 310 (398)
T 2pp0_A 236 AIRMGRKMEQFNLIWI----EEPLDAYDIEGHAQLAAA-LDTPIATGEMLTSFREHEQLILGNASDFVQPDAPRVGGISP 310 (398)
T ss_dssp HHHHHHHHGGGTCSCE----ECCSCTTCHHHHHHHHHH-CSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHHH
T ss_pred HHHHHHHHHHcCCcee----eCCCChhhHHHHHHHHhh-CCCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHH
Confidence 3466777777786643 455566789999999986 899999999999999999998777 788877 444435567
Q ss_pred HHHHHHHHHHcCCcEEEEeCCHHHHH
Q 018446 277 IRYMTKICKLLGLTALVEVHDEREMD 302 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH~~eELe 302 (355)
...+.++|+..|+.+. +|..-|.-
T Consensus 311 ~~~i~~~A~~~gi~~~--~h~~~~~~ 334 (398)
T 2pp0_A 311 FLKIMDLAAKHGRKLA--PHFAMEVH 334 (398)
T ss_dssp HHHHHHHHHHTTCEEC--CCSCHHHH
T ss_pred HHHHHHHHHHcCCeEe--ecCccHHH
Confidence 7889999999999876 67765543
No 190
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=87.78 E-value=1.4 Score=42.56 Aligned_cols=115 Identities=15% Similarity=0.142 Sum_probs=71.5
Q ss_pred CHHHHHHHHHHcCceEEEE----------------------------e-ccCCC------CCCCHHHHHHHHhcCCCCCe
Q 018446 198 DPVEIARSYEKGGAACLSI----------------------------L-TDEKY------FKGSFENLEAVRSAGVKCPL 242 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISV----------------------------L-TD~~f------F~GS~edL~~VR~a~v~lPV 242 (355)
|..+..+... .||+.|+. + |+... .+=+++.|..+++. +++||
T Consensus 124 ~l~EAlrri~-eGA~mIrTtge~gtg~v~~av~h~r~~~~~i~~l~g~~t~~el~~~a~~~~ad~elI~~Ike~-~~IPV 201 (291)
T 3o07_A 124 DLGEALRRIN-EGAAMIRTKGEAGTGDVSEAVKHIRRITEEIKACQQLKSEDDIAKVAEEMRVPVSLLKDVLEK-GKLPV 201 (291)
T ss_dssp SHHHHHHHHH-HTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHH-TSCSS
T ss_pred CHHHHHHHHH-CCCCEEEecCcCCCccHHHHHHHHHHHHHHHHHHHcCCCHHHhhhcccccCCCHHHHHHHHHc-cCCCE
Confidence 5666555555 48999997 3 54431 36678999999986 89999
Q ss_pred ec--cccccCHHHHHHHHHcCCcchHHHHhcCC---HHH-HHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEee
Q 018446 243 LC--KEFIVDAWQIYYARTKGADAVLLIAAVLP---DLD-IRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGIN 316 (355)
Q Consensus 243 Lr--KDFIIdpyQI~eAr~~GADAVLLIaaiL~---~~~-L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGIN 316 (355)
+. .==|-+|-+..++..+|||+|++.-+++. +.. .+.|.+... .. .|.+-|-.+-.--|-.+.|||
T Consensus 202 V~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~s~DP~~~Akafv~Av~-~~-------~~~~~~~~~s~~l~~~m~g~~ 273 (291)
T 3o07_A 202 VNFAAGGVATPADAALLMQLGCDGVFVGSGIFKSSNPVRLATAVVEATT-HF-------DNPSKLLEVSSDLGELMGGVS 273 (291)
T ss_dssp CEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHHHHH-TT-------TCHHHHHHHHSSCCCC-----
T ss_pred EEecCCCCCCHHHHHHHHHhCCCEEEEchHHhCCCCHHHHHHHHHHHHH-hc-------cCHHHHHHHHhcccccccCcc
Confidence 64 44455899999999999999999999986 433 333433333 22 566666665432266799999
Q ss_pred CCCCCc
Q 018446 317 NRNLET 322 (355)
Q Consensus 317 NRdL~T 322 (355)
..+|..
T Consensus 274 ~~~~~~ 279 (291)
T 3o07_A 274 IESISH 279 (291)
T ss_dssp ------
T ss_pred hhhhcc
Confidence 988843
No 191
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=87.71 E-value=1.2 Score=42.43 Aligned_cols=66 Identities=23% Similarity=0.290 Sum_probs=43.3
Q ss_pred cCHHHHHHHHHcCCc--------chHHHHhcCCHHHH-------HHHHHHHHHcC--CcEEEEeCCHHHHHHHhccCCCe
Q 018446 249 VDAWQIYYARTKGAD--------AVLLIAAVLPDLDI-------RYMTKICKLLG--LTALVEVHDEREMDRVLGIEGIE 311 (355)
Q Consensus 249 IdpyQI~eAr~~GAD--------AVLLIaaiL~~~~L-------~~L~~~A~~LG--LeaLVEVH~~eELerAl~l~ga~ 311 (355)
+-.++-|.++.-|++ +|+ +.+..+ +.+-.+.+.++ +...|||+|.+|+..|+.. |++
T Consensus 148 ~r~~e~~A~~~GG~~~hr~~l~d~vl-----ik~nh~~~~g~i~~ai~~~r~~~~~~~~i~vev~tlee~~~A~~a-GaD 221 (294)
T 3c2e_A 148 LRRLEKYSMLVGGCDTHRYDLSSMVM-----LKDNHIWATGSITNAVKNARAVCGFAVKIEVECLSEDEATEAIEA-GAD 221 (294)
T ss_dssp CHHHHHHHHHHTTCBCCCCSTTTSEE-----ECHHHHHHHSSHHHHHHHHHHHHCTTSCEEEECSSSHHHHHHHHH-TCS
T ss_pred HHHHHHHHHHhCCCCceecCccceEE-----eecchhhhcCCHHHHHHHHHHhcCcCCeEEEecCCHHHHHHHHHc-CCC
Confidence 335666667777877 555 222222 22333333454 5789999999999999996 999
Q ss_pred EEEeeCCCC
Q 018446 312 LIGINNRNL 320 (355)
Q Consensus 312 iIGINNRdL 320 (355)
+|++.|-++
T Consensus 222 ~I~ld~~~~ 230 (294)
T 3c2e_A 222 VIMLDNFKG 230 (294)
T ss_dssp EEECCC---
T ss_pred EEEECCCCH
Confidence 999988543
No 192
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=87.70 E-value=1.4 Score=41.95 Aligned_cols=92 Identities=13% Similarity=0.141 Sum_probs=71.4
Q ss_pred CHH-HHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHH-HHhcCCH
Q 018446 198 DPV-EIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLL-IAAVLPD 274 (355)
Q Consensus 198 Dp~-~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLL-IaaiL~~ 274 (355)
+.. ++++..++.|...| |+.+-..+++.+..+|+. +++||..-+-+.++.++.+....| +|.|.+ ...+=+-
T Consensus 200 ~a~~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi 274 (369)
T 2p8b_A 200 ANTLTALRSLGHLNIDWI----EQPVIADDIDAMAHIRSK-TDLPLMIDEGLKSSREMRQIIKLEAADKVNIKLMKCGGI 274 (369)
T ss_dssp HHHHHHHHTSTTSCCSCE----ECCBCTTCHHHHHHHHHT-CCSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSH
T ss_pred HHHHHHHHHHHhCCCcEE----ECCCCcccHHHHHHHHHh-CCCCEEeCCCCCCHHHHHHHHHhCCCCEEEeecchhCCH
Confidence 344 66777777776644 444566789999999985 899999999999999999988766 788877 4444355
Q ss_pred HHHHHHHHHHHHcCCcEEEE
Q 018446 275 LDIRYMTKICKLLGLTALVE 294 (355)
Q Consensus 275 ~~L~~L~~~A~~LGLeaLVE 294 (355)
.+...+.++|+..|+.+.+-
T Consensus 275 t~~~~i~~~A~~~g~~~~~~ 294 (369)
T 2p8b_A 275 YPAVKLAHQAEMAGIECQVG 294 (369)
T ss_dssp HHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHcCCcEEec
Confidence 67788999999999997643
No 193
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=87.64 E-value=1.3 Score=43.43 Aligned_cols=50 Identities=20% Similarity=0.447 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCcccc
Q 018446 274 DLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEV 325 (355)
Q Consensus 274 ~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~Tfev 325 (355)
.+.|+.|.++|+++||..+.|++|.+.++.+.++ ++++-|-.|++..|.+
T Consensus 156 ~egl~~l~~~~~e~Gl~~~te~~d~~~~~~l~~~--vd~lkIgAr~~~n~~L 205 (350)
T 1vr6_A 156 EKGLEYLREAADKYGMYVVTEALGEDDLPKVAEY--ADIIQIGARNAQNFRL 205 (350)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHH--CSEEEECGGGTTCHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHh--CCEEEECcccccCHHH
Confidence 5789999999999999999999999999999886 8999999999988754
No 194
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=87.57 E-value=1 Score=43.41 Aligned_cols=93 Identities=13% Similarity=0.138 Sum_probs=71.5
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~ 276 (355)
..++++..++.|...| |+.+-..+++.+..+|+. +++||..-+-+.+++++.+....| +|.|.+=+.-. +-.+
T Consensus 225 ai~~~~~l~~~~i~~i----E~P~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite 299 (403)
T 2ox4_A 225 AIQFAKAIEEFNIFFY----EEINTPLNPRLLKEAKKK-IDIPLASGERIYSRWGFLPFLEDRSIDVIQPDLGTCGGFTE 299 (403)
T ss_dssp HHHHHHHHGGGCEEEE----ECCSCTTSTHHHHHHHHT-CCSCEEECTTCCHHHHHHHHHHTTCCSEECCCHHHHTHHHH
T ss_pred HHHHHHHHHhhCCCEE----eCCCChhhHHHHHHHHHh-CCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHH
Confidence 3466777777775543 444666789999999985 899999999999999999998877 78887733333 3456
Q ss_pred HHHHHHHHHHcCCcEEEEeCCH
Q 018446 277 IRYMTKICKLLGLTALVEVHDE 298 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH~~ 298 (355)
...+.++|+..|+.+.+ |+.
T Consensus 300 ~~~i~~~A~~~g~~~~~--h~~ 319 (403)
T 2ox4_A 300 FKKIADMAHIFEVTVQA--HVA 319 (403)
T ss_dssp HHHHHHHHHHTTCEECC--CCC
T ss_pred HHHHHHHHHHcCCEEee--cCC
Confidence 67889999999999776 654
No 195
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=87.36 E-value=2 Score=40.90 Aligned_cols=92 Identities=14% Similarity=0.139 Sum_probs=73.1
Q ss_pred HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHHH
Q 018446 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLDI 277 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~L 277 (355)
.++++..++.|..-| |+.+-..+++.+..+|+. +++||..-+-+.++.++.+....| +|.|.+=+.-. +-.+.
T Consensus 199 ~~~~~~l~~~~i~~i----E~P~~~~~~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~ 273 (368)
T 1sjd_A 199 APQLARLDPFGLLLI----EQPLEEEDVLGHAELARR-IQTPICLDESIVSARAAADAIKLGAVQIVNIKPGRVGGYLEA 273 (368)
T ss_dssp HHHHHTTGGGCCSEE----ECCSCTTCHHHHHHHHTT-CSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHH
T ss_pred HHHHHHHHhcCCCeE----eCCCChhhHHHHHHHHHh-CCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHH
Confidence 678888888886643 455667899999999985 899999999999999999988777 68877744444 45677
Q ss_pred HHHHHHHHHcCCcEEEEeC
Q 018446 278 RYMTKICKLLGLTALVEVH 296 (355)
Q Consensus 278 ~~L~~~A~~LGLeaLVEVH 296 (355)
..+.++|+..|+.+++--.
T Consensus 274 ~~i~~~A~~~g~~~~~~~~ 292 (368)
T 1sjd_A 274 RRVHDVCAAHGIPVWCGGM 292 (368)
T ss_dssp HHHHHHHHHTTCCEEECCC
T ss_pred HHHHHHHHHcCCcEEeCCc
Confidence 8899999999999866433
No 196
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=87.35 E-value=1.8 Score=41.33 Aligned_cols=89 Identities=16% Similarity=0.176 Sum_probs=68.8
Q ss_pred HHHHHHH-HHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHH-HHhcCCHHH
Q 018446 200 VEIARSY-EKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLL-IAAVLPDLD 276 (355)
Q Consensus 200 ~~iA~~Y-e~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLL-IaaiL~~~~ 276 (355)
.++++.+ ++.|. . +-|| +- +++.+..+|+. +++||..-+-+.++.++.++...| +|.|.+ +..+=+-.+
T Consensus 207 ~~~~~~l~~~~~i-~---iE~P-~~--~~~~~~~l~~~-~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~ 278 (371)
T 2ps2_A 207 LRLLRLLPHGLDF-A---LEAP-CA--TWRECISLRRK-TDIPIIYDELATNEMSIVKILADDAAEGIDLKISKAGGLTR 278 (371)
T ss_dssp HHHHHHSCTTCCC-E---EECC-BS--SHHHHHHHHTT-CCSCEEESTTCCSHHHHHHHHHHTCCSEEEEEHHHHTSHHH
T ss_pred HHHHHHHHhhcCC-c---CcCC-cC--CHHHHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHhCCCCEEEechhhcCCHHH
Confidence 3556666 66665 3 3444 33 99999999985 899999999999999999987776 688877 444445667
Q ss_pred HHHHHHHHHHcCCcEEEEeC
Q 018446 277 IRYMTKICKLLGLTALVEVH 296 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH 296 (355)
...+.++|+..|+.+.+-..
T Consensus 279 ~~~i~~~A~~~g~~~~~~~~ 298 (371)
T 2ps2_A 279 GRRQRDICLAAGYSVSVQET 298 (371)
T ss_dssp HHHHHHHHHHHTCEEEEECS
T ss_pred HHHHHHHHHHcCCeEEecCC
Confidence 78899999999999987643
No 197
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=87.15 E-value=0.51 Score=44.20 Aligned_cols=120 Identities=23% Similarity=0.257 Sum_probs=74.1
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCC-----------------------CCCHHHHH
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYF-----------------------KGSFENLE 231 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF-----------------------~GS~edL~ 231 (355)
++.++|.=+=.-.|+.. ...++++.++++ |++|=+=+ .|- .+.++.++
T Consensus 14 ~~~~li~~i~~GdP~~~------~~~~~~~~l~~~-aD~IElG~--PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~ 84 (271)
T 1ujp_A 14 GRAALIPYLTAGFPSRE------GFLQAVEEVLPY-ADLLEIGL--PYSDPLGDGPVIQRASELALRKGMSVQGALELVR 84 (271)
T ss_dssp TBCEEEEEEETTSSCHH------HHHHHHHHHGGG-CSSEEEEC--CCCC----CHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred CCceEEEEecCCCCChH------HHHHHHHHHHhc-CCEEEECC--CCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 34567776655555431 244677788887 88877632 111 12367899
Q ss_pred HHHhcCCCCCeeccc-c-ccC----HHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEE--Ee-CCHHHHH
Q 018446 232 AVRSAGVKCPLLCKE-F-IVD----AWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALV--EV-HDEREMD 302 (355)
Q Consensus 232 ~VR~a~v~lPVLrKD-F-IId----pyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLV--EV-H~~eELe 302 (355)
.+|+. +++||+.-. + .++ ..-+..+..+|||++++. =|+.+++.++.+.+++.|++.+. -- .+.+.++
T Consensus 85 ~ir~~-~~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~--Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~ 161 (271)
T 1ujp_A 85 EVRAL-TEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILP--DLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIA 161 (271)
T ss_dssp HHHHH-CCSCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECT--TCCGGGCHHHHHHHHHHTCEEECEECTTCCHHHHH
T ss_pred HHHhc-CCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEec--CCCHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHH
Confidence 99986 899977621 0 011 122556889999987664 34457899999999999986333 22 2245555
Q ss_pred HHhc
Q 018446 303 RVLG 306 (355)
Q Consensus 303 rAl~ 306 (355)
....
T Consensus 162 ~ia~ 165 (271)
T 1ujp_A 162 TVVR 165 (271)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 5433
No 198
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=87.09 E-value=1.1 Score=42.07 Aligned_cols=39 Identities=21% Similarity=0.097 Sum_probs=34.1
Q ss_pred HHHHHHHHhcCCCCCeeccccccC-HHHHHHHHHcCCcchHH
Q 018446 227 FENLEAVRSAGVKCPLLCKEFIVD-AWQIYYARTKGADAVLL 267 (355)
Q Consensus 227 ~edL~~VR~a~v~lPVLrKDFIId-pyQI~eAr~~GADAVLL 267 (355)
.+.++.+|+. +++||+. +|.|+ +-|+.++...|||+|+.
T Consensus 195 ~~~v~~vr~~-~~~pv~v-GfGI~~~e~~~~~~~~gADgvVV 234 (267)
T 3vnd_A 195 ENILTQLAEF-NAPPPLL-GFGIAEPEQVRAAIKAGAAGAIS 234 (267)
T ss_dssp HHHHHHHHTT-TCCCEEE-CSSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHh-cCCCEEE-ECCcCCHHHHHHHHHcCCCEEEE
Confidence 4778899986 7999887 99995 99999899999999976
No 199
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=87.01 E-value=0.59 Score=44.85 Aligned_cols=72 Identities=31% Similarity=0.290 Sum_probs=54.5
Q ss_pred HHHHHHHcCceEEEEe-ccC----CCC----------CCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchH
Q 018446 202 IARSYEKGGAACLSIL-TDE----KYF----------KGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVL 266 (355)
Q Consensus 202 iA~~Ye~~GAaaISVL-TD~----~fF----------~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVL 266 (355)
.|+..++.||++|.|- .+. ..| .|.++.+..+++. +++||+.-==|-++-.+.++..+|||+|.
T Consensus 157 ~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~-~~iPViaaGGI~~~~~~~~~l~~GAd~V~ 235 (369)
T 3bw2_A 157 EARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREA-VDIPVVAAGGIMRGGQIAAVLAAGADAAQ 235 (369)
T ss_dssp HHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHH-CSSCEEEESSCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHh-cCceEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 4677778899999882 110 011 2347888899886 79999876666699999999999999999
Q ss_pred HHHhcCCH
Q 018446 267 LIAAVLPD 274 (355)
Q Consensus 267 LIaaiL~~ 274 (355)
+.-+++..
T Consensus 236 vGs~~~~~ 243 (369)
T 3bw2_A 236 LGTAFLAT 243 (369)
T ss_dssp ESHHHHTS
T ss_pred EChHHhCC
Confidence 88777644
No 200
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=86.92 E-value=0.23 Score=50.06 Aligned_cols=74 Identities=19% Similarity=0.184 Sum_probs=52.2
Q ss_pred HHHHHHHHHcCceEEEEeccC-C--------CC-CCCHHHHHHHHhc--CCCCCeeccccccCHHHHHHHHHcCCcchHH
Q 018446 200 VEIARSYEKGGAACLSILTDE-K--------YF-KGSFENLEAVRSA--GVKCPLLCKEFIVDAWQIYYARTKGADAVLL 267 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~-~--------fF-~GS~edL~~VR~a--~v~lPVLrKDFIIdpyQI~eAr~~GADAVLL 267 (355)
.+.|+...++||++|.|-..+ . .+ ...++-+..++++ ..++||+.-==|-++-+|.+|..+|||+|.+
T Consensus 281 ~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~GAd~V~v 360 (490)
T 4avf_A 281 AEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAGAYCVMM 360 (490)
T ss_dssp HHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcCCCeeee
Confidence 367888999999999982111 0 11 1234555555542 2479998766666999999999999999998
Q ss_pred HHhcCC
Q 018446 268 IAAVLP 273 (355)
Q Consensus 268 IaaiL~ 273 (355)
=-+++.
T Consensus 361 Gs~~~~ 366 (490)
T 4avf_A 361 GSMFAG 366 (490)
T ss_dssp CTTTTT
T ss_pred cHHHhc
Confidence 766654
No 201
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=86.91 E-value=10 Score=34.20 Aligned_cols=137 Identities=10% Similarity=0.065 Sum_probs=85.8
Q ss_pred ccHHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCC
Q 018446 161 RDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKC 240 (355)
Q Consensus 161 rdF~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~l 240 (355)
..|.+.|.... .+...+..|+|..+. +. ...--...+++...+.|..-=.+ +..-+.+.|..+|+....+
T Consensus 86 ptL~evl~~~~--~~~~~l~iEiK~~~~--~~-~~~~~~~~v~~~l~~~~~~~~v~-----~~SF~~~~l~~~~~~~p~~ 155 (250)
T 3ks6_A 86 MTLEELCALYV--DSHVNFRCEIKPGVD--GL-PYEGFVALVIAGLERHSMLERTT-----FSSFLLASMDELWKATTRP 155 (250)
T ss_dssp EEHHHHHHHHT--TCSCEEEEEECCCTT--SC-CCTTHHHHHHHHHHHTTCGGGEE-----EEESCHHHHHHHHHHCCSC
T ss_pred cCHHHHHHHHh--ccCcEEEEEeCCCcc--cC-cchHHHHHHHHHHHhcCCCCCEE-----EEeCCHHHHHHHHHHCCCC
Confidence 35666665432 134689999996431 11 11111345666666666421011 1123678888898765566
Q ss_pred CeeccccccCHH--------H-HHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEE-EeCCHHHHHHHhccCCC
Q 018446 241 PLLCKEFIVDAW--------Q-IYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALV-EVHDEREMDRVLGIEGI 310 (355)
Q Consensus 241 PVLrKDFIIdpy--------Q-I~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLV-EVH~~eELerAl~l~ga 310 (355)
|+- + +..+ + +..++..|++++-.-...+++ ++++.|+..|+.+.+ -|.+++++++.+++ |+
T Consensus 156 ~~~---l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~~G~~V~~WTvn~~~~~~~l~~~-GV 226 (250)
T 3ks6_A 156 RLW---L-VSPSVLQQLGPGAVIETAIAHSIHEIGVHIDTADA----GLMAQVQAAGLDFGCWAAHTPSQITKALDL-GV 226 (250)
T ss_dssp EEE---E-ECHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGCCH----HHHHHHHHTTCEEEEECCCSHHHHHHHHHH-TC
T ss_pred cEE---E-EecccccccchhHHHHHHHhcCCCEEecchhhCCH----HHHHHHHHCCCEEEEEeCCCHHHHHHHHHc-CC
Confidence 642 1 2221 1 234578899987766666764 688999999999877 57889999999997 88
Q ss_pred eEEEee
Q 018446 311 ELIGIN 316 (355)
Q Consensus 311 ~iIGIN 316 (355)
+-|--|
T Consensus 227 DgIiTD 232 (250)
T 3ks6_A 227 KVFTTD 232 (250)
T ss_dssp SEEEES
T ss_pred CEEEcC
Confidence 877655
No 202
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=86.73 E-value=2.4 Score=40.72 Aligned_cols=117 Identities=15% Similarity=0.200 Sum_probs=85.1
Q ss_pred HHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCe
Q 018446 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (355)
Q Consensus 163 F~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPV 242 (355)
...++++... ....+..+. . |-+.. -+...+++..++.|..-| |+.+-.++++.+..+|+. +++||
T Consensus 180 ~v~avR~~~g--~~~~l~vDa-----n-~~~~~-~~A~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~ipI 245 (377)
T 3my9_A 180 ILETMRGEFG--ERIDLRLDF-----N-QALTP-FGAMKILRDVDAFRPTFI----EQPVPRRHLDAMAGFAAA-LDTPI 245 (377)
T ss_dssp HHHHHHHHHG--GGSEEEEEC-----T-TCCCT-TTHHHHHHHHHTTCCSCE----ECCSCTTCHHHHHHHHHH-CSSCE
T ss_pred HHHHHHHHhC--CCCeEEEeC-----C-CCcCH-HHHHHHHHHHhhcCCCEE----ECCCCccCHHHHHHHHHh-CCCCE
Confidence 3455665431 124577764 2 22332 356788999998886554 455667899999999986 89999
Q ss_pred eccccccCHHHHHHHHHcC-CcchHH-HHhcCCHHHHHHHHHHHHHcCCcEEE
Q 018446 243 LCKEFIVDAWQIYYARTKG-ADAVLL-IAAVLPDLDIRYMTKICKLLGLTALV 293 (355)
Q Consensus 243 LrKDFIIdpyQI~eAr~~G-ADAVLL-IaaiL~~~~L~~L~~~A~~LGLeaLV 293 (355)
..-+-+.+++|+.+....| +|.|.+ +..+=+-.+...+..+|+..|+.+.+
T Consensus 246 a~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi~~~~ 298 (377)
T 3my9_A 246 LADESCFDAVDLMEVVRRQAADAISVKIMKCGGLMKAQSLMAIADTAGLPGYG 298 (377)
T ss_dssp EESTTCSSHHHHHHHHHHTCCSEEECCHHHHTSHHHHHHHHHHHHHHTCCEEC
T ss_pred EECCccCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEec
Confidence 9999999999999888766 788777 33333456778889999999999864
No 203
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=86.59 E-value=0.21 Score=50.51 Aligned_cols=74 Identities=15% Similarity=0.099 Sum_probs=50.4
Q ss_pred HHHHHHHHHcCceEEEEeccCCC---------C-CCCHHHHHHHHhc--CCCCCeeccccccCHHHHHHHHHcCCcchHH
Q 018446 200 VEIARSYEKGGAACLSILTDEKY---------F-KGSFENLEAVRSA--GVKCPLLCKEFIVDAWQIYYARTKGADAVLL 267 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~f---------F-~GS~edL~~VR~a--~v~lPVLrKDFIIdpyQI~eAr~~GADAVLL 267 (355)
.+.|+...++||++|.|-.-+.. + ...++-+..+.++ ..++||+.-==|-++-+|.+|.++|||+|.+
T Consensus 283 ~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GAd~V~i 362 (496)
T 4fxs_A 283 AEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMV 362 (496)
T ss_dssp HHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHcCCCeEEe
Confidence 36788899999999997421111 1 1233444555432 1379999855566899999999999999987
Q ss_pred HHhcCC
Q 018446 268 IAAVLP 273 (355)
Q Consensus 268 IaaiL~ 273 (355)
=-+++.
T Consensus 363 Gs~f~~ 368 (496)
T 4fxs_A 363 GSMFAG 368 (496)
T ss_dssp STTTTT
T ss_pred cHHHhc
Confidence 655554
No 204
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=86.57 E-value=2.7 Score=37.38 Aligned_cols=64 Identities=19% Similarity=0.268 Sum_probs=44.3
Q ss_pred HHHHHHHHcCCcchHHHH------hcC-----------CH-------HHHHHHHHHHHHcCCcEEEEeC------CHHHH
Q 018446 252 WQIYYARTKGADAVLLIA------AVL-----------PD-------LDIRYMTKICKLLGLTALVEVH------DEREM 301 (355)
Q Consensus 252 yQI~eAr~~GADAVLLIa------aiL-----------~~-------~~L~~L~~~A~~LGLeaLVEVH------~~eEL 301 (355)
-.|..|..+||+.|.+.. ... .+ +.|.++.++|.+.|+...+|-| +.+++
T Consensus 94 ~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~~~~~~~~~~ 173 (301)
T 3cny_A 94 KHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAYHHHMGTGIQTKEET 173 (301)
T ss_dssp HHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTSSSCSHHHH
T ss_pred HHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEEecCCCcccCCHHHH
Confidence 356678889999877653 111 11 3567888999999999999987 67888
Q ss_pred HHHhccCCCeEEEe
Q 018446 302 DRVLGIEGIELIGI 315 (355)
Q Consensus 302 erAl~l~ga~iIGI 315 (355)
.+.++.-+.+-+|+
T Consensus 174 ~~l~~~~~~~~vg~ 187 (301)
T 3cny_A 174 DRLMANTDPKLVGL 187 (301)
T ss_dssp HHHHHTSCTTTCEE
T ss_pred HHHHHhCCccceeE
Confidence 88776423333444
No 205
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=86.38 E-value=3.8 Score=38.66 Aligned_cols=109 Identities=16% Similarity=0.163 Sum_probs=72.5
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCCCHHH----HHHHHhcCCCCCeeccccccC---HHHHHHHHHcCCcchHHHHh
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFEN----LEAVRSAGVKCPLLCKEFIVD---AWQIYYARTKGADAVLLIAA 270 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~ed----L~~VR~a~v~lPVLrKDFIId---pyQI~eAr~~GADAVLLIaa 270 (355)
++ +++.+..++|+-. ++.-. + -+.+. +..+|+. ++.|+-..=|+.+ ..++..+...|+|+|.+-..
T Consensus 25 ~~-~la~av~~aG~lG--~i~~~-~--~~~~~~~~~i~~i~~~-~~~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~g 97 (332)
T 2z6i_A 25 DG-DLAGAVSKAGGLG--IIGGG-N--APKEVVKANIDKIKSL-TDKPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAG 97 (332)
T ss_dssp CH-HHHHHHHHHTSBE--EEECT-T--CCHHHHHHHHHHHHHH-CCSCEEEEECTTSTTHHHHHHHHHHTTCSEEEECSS
T ss_pred cH-HHHHHHHhCCCcE--EeCCC-C--CCHHHHHHHHHHHHHh-cCCCEEEEecCCCCCHHHHHHHHHHCCCCEEEECCC
Confidence 44 4666777777622 22111 1 24444 4456654 5567644333323 35678889999999987665
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCC
Q 018446 271 VLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRN 319 (355)
Q Consensus 271 iL~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRd 319 (355)
.+. ++++..++.|+..++-|++.+++.++.+. |++.|.+.++.
T Consensus 98 -~p~----~~i~~l~~~g~~v~~~v~~~~~a~~~~~~-GaD~i~v~g~~ 140 (332)
T 2z6i_A 98 -NPS----KYMERFHEAGIIVIPVVPSVALAKRMEKI-GADAVIAEGME 140 (332)
T ss_dssp -CGG----GTHHHHHHTTCEEEEEESSHHHHHHHHHT-TCSCEEEECTT
T ss_pred -ChH----HHHHHHHHcCCeEEEEeCCHHHHHHHHHc-CCCEEEEECCC
Confidence 332 34566667899999999999999999986 99999998764
No 206
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=86.33 E-value=3.3 Score=36.31 Aligned_cols=134 Identities=22% Similarity=0.217 Sum_probs=83.4
Q ss_pred cHHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCC
Q 018446 162 DFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCP 241 (355)
Q Consensus 162 dF~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lP 241 (355)
++.+.|++.. + ..+++++|.. +|-. +|..+++.+.++||++++|..+. ..+.|+.+++.+ .++
T Consensus 41 ~~i~~lr~~~---~-~~v~~D~kl~-----DI~~--t~~~~v~~~~~~Gad~vtvh~~~-----g~~~i~~~~~~~-gv~ 103 (208)
T 2czd_A 41 DIIRRLKEET---G-VEIIADLKLA-----DIPN--TNRLIARKVFGAGADYVIVHTFV-----GRDSVMAVKELG-EII 103 (208)
T ss_dssp THHHHHHHHH---C-CEEEEEEEEC-----SCHH--HHHHHHHHHHHTTCSEEEEESTT-----CHHHHHHHHTTS-EEE
T ss_pred HHHHHHHHcC---C-CEEEEEeeeC-----chHH--HHHHHHHHHHhcCCCEEEEeccC-----CHHHHHHHHHhC-CcE
Confidence 4777787642 2 3699999997 2221 47788899999999999998763 356688888753 444
Q ss_pred eecc-------ccccCH--HHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeC---CHH--HHHHHhcc
Q 018446 242 LLCK-------EFIVDA--WQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DER--EMDRVLGI 307 (355)
Q Consensus 242 VLrK-------DFIIdp--yQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH---~~e--ELerAl~l 307 (355)
++.. +++.+- +-...+...|+|++..+...+ ++++.+.+. +|...++ |- +.+ ....++++
T Consensus 104 vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~~~--~~i~~lr~~---~~~~~~i-v~gGI~~~g~~~~~~~~a 177 (208)
T 2czd_A 104 MVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPGTRP--ERIGYIRDR---LKEGIKI-LAPGIGAQGGKAKDAVKA 177 (208)
T ss_dssp EECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCSST--HHHHHHHHH---SCTTCEE-EECCCCSSTTHHHHHHHH
T ss_pred EEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCCCh--HHHHHHHHh---CCCCeEE-EECCCCCCCCCHHHHHHc
Confidence 4433 111111 123467788999986665543 344444433 3654433 32 233 67777876
Q ss_pred CCCeEEEeeCCCC
Q 018446 308 EGIELIGINNRNL 320 (355)
Q Consensus 308 ~ga~iIGINNRdL 320 (355)
|++++-+ +|.+
T Consensus 178 -Gad~vvv-Gr~I 188 (208)
T 2czd_A 178 -GADYIIV-GRAI 188 (208)
T ss_dssp -TCSEEEE-CHHH
T ss_pred -CCCEEEE-ChHH
Confidence 8887765 5655
No 207
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=86.28 E-value=2.1 Score=41.34 Aligned_cols=115 Identities=12% Similarity=0.137 Sum_probs=84.0
Q ss_pred HHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCH---HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCC
Q 018446 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDP---VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVK 239 (355)
Q Consensus 163 F~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp---~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~ 239 (355)
...++++... ....+..+. +..+++ ..+++.+++.|...| |+.+-..+++.+..+|+. ++
T Consensus 183 ~v~avR~a~g--~~~~l~vDa----------n~~~~~~~A~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~ 245 (383)
T 3i4k_A 183 RVAELAREVG--DRVSLRIDI----------NARWDRRTALHYLPILAEAGVELF----EQPTPADDLETLREITRR-TN 245 (383)
T ss_dssp HHHHHHHTTT--TTSEEEEEC----------TTCSCHHHHHHHHHHHHHTTCCEE----ESCSCTTCHHHHHHHHHH-HC
T ss_pred HHHHHHHHcC--CCCEEEEEC----------CCCCCHHHHHHHHHHHHhcCCCEE----ECCCChhhHHHHHHHHhh-CC
Confidence 3455655421 234577764 223344 457888888886554 444667789999999986 79
Q ss_pred CCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHHHHHHHHHHHHcCCcEEEE
Q 018446 240 CPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLDIRYMTKICKLLGLTALVE 294 (355)
Q Consensus 240 lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~L~~L~~~A~~LGLeaLVE 294 (355)
+||..-+-+.+++++.+....| +|.|.+=+.-+ +-.+...+.++|+..|+.+.+-
T Consensus 246 iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~ 302 (383)
T 3i4k_A 246 VSVMADESVWTPAEALAVVKAQAADVIALKTTKHGGLLESKKIAAIAEAGGLACHGA 302 (383)
T ss_dssp CEEEESTTCSSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCEEecCccCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEeC
Confidence 9999999999999999988877 78887755555 4567888999999999987653
No 208
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=86.14 E-value=2.7 Score=39.90 Aligned_cols=132 Identities=16% Similarity=0.219 Sum_probs=80.9
Q ss_pred HHHHHHHHHcCceEEEEec----------------cCCCCCCCH--------HHHHHHHhcCCCCCeecc----cc---c
Q 018446 200 VEIARSYEKGGAACLSILT----------------DEKYFKGSF--------ENLEAVRSAGVKCPLLCK----EF---I 248 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLT----------------D~~fF~GS~--------edL~~VR~a~v~lPVLrK----DF---I 248 (355)
.+-|+...++|+++|=+.. ...-|+||+ |-+.+||++ ++.||..| || .
T Consensus 147 ~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~-v~~pv~vris~~~~~~~g 225 (338)
T 1z41_A 147 KQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQV-WDGPLFVRVSASDYTDKG 225 (338)
T ss_dssp HHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH-CCSCEEEEEECCCCSTTS
T ss_pred HHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHH-cCCcEEEEecCcccCCCC
Confidence 4445666788999997653 223478986 556778886 69999877 22 1
Q ss_pred cC---HHHHH-HHHHcCCcchHHHHhcC-------CH-HHHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhccCCCeEEE
Q 018446 249 VD---AWQIY-YARTKGADAVLLIAAVL-------PD-LDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIG 314 (355)
Q Consensus 249 Id---pyQI~-eAr~~GADAVLLIaaiL-------~~-~~L~~L~~~A~~LGLeaLV--EVH~~eELerAl~l~ga~iIG 314 (355)
.+ ..++. ....+|+|.|-+..... .+ ..+..+..+.+.+++-.++ -++|.+++++++...++++|+
T Consensus 226 ~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~ 305 (338)
T 1z41_A 226 LDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIF 305 (338)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEe
Confidence 22 22333 33468999987754311 11 1344444555566765444 468999999999862399999
Q ss_pred eeCCCCCccccChhhHHhhhcc
Q 018446 315 INNRNLETFEVDNSNTKKLLEG 336 (355)
Q Consensus 315 INNRdL~TfevDl~~t~~L~~~ 336 (355)
+--- |--|++-..++...
T Consensus 306 iGR~----~i~nPdl~~ki~~~ 323 (338)
T 1z41_A 306 IGRE----LLRDPFFARTAAKQ 323 (338)
T ss_dssp ECHH----HHHCTTHHHHHHHH
T ss_pred ecHH----HHhCchHHHHHHcC
Confidence 8532 22345555666544
No 209
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=86.01 E-value=0.78 Score=43.21 Aligned_cols=39 Identities=23% Similarity=0.201 Sum_probs=34.0
Q ss_pred HHHHHHHHhcCCCCCeecccccc-CHHHHHHHHHcCCcchHH
Q 018446 227 FENLEAVRSAGVKCPLLCKEFIV-DAWQIYYARTKGADAVLL 267 (355)
Q Consensus 227 ~edL~~VR~a~v~lPVLrKDFII-dpyQI~eAr~~GADAVLL 267 (355)
.+.+..+|+. +++||+. .|.| ++-|+.++...|||+|+.
T Consensus 197 ~~~v~~vr~~-~~~Pv~v-GfGIst~e~~~~~~~~gADgvIV 236 (271)
T 3nav_A 197 HALLERLQQF-DAPPALL-GFGISEPAQVKQAIEAGAAGAIS 236 (271)
T ss_dssp HHHHHHHHHT-TCCCEEE-CSSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHh-cCCCEEE-ECCCCCHHHHHHHHHcCCCEEEE
Confidence 4678899986 7999987 9999 599999899999999976
No 210
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=85.99 E-value=2.1 Score=41.45 Aligned_cols=93 Identities=11% Similarity=0.013 Sum_probs=74.9
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHH-hcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVR-SAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDL 275 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR-~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~ 275 (355)
..++++.+++.|...| |+.+-..+++.+..+| +. +++||..-+-+.++++..+....| +|.|.+=..-+ +-.
T Consensus 211 A~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~~-~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit 285 (389)
T 3ozy_A 211 ALAMLRILDEAGCYWF----EEPLSIDDIEGHRILRAQG-TPVRIATGENLYTRNAFNDYIRNDAIDVLQADASRAGGIT 285 (389)
T ss_dssp HHHHHHHHHHTTCSEE----ESCSCTTCHHHHHHHHTTC-CSSEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTSSCHH
T ss_pred HHHHHHHHHhcCCCEE----ECCCCcccHHHHHHHHhcC-CCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHH
Confidence 3467788888887766 4556677999999999 85 899999999999999999888766 78887755555 466
Q ss_pred HHHHHHHHHHHcCCcEEEEeCCH
Q 018446 276 DIRYMTKICKLLGLTALVEVHDE 298 (355)
Q Consensus 276 ~L~~L~~~A~~LGLeaLVEVH~~ 298 (355)
+...+..+|+..|+.+. +|+.
T Consensus 286 ~~~~ia~~A~~~gi~~~--~h~~ 306 (389)
T 3ozy_A 286 EALAISASAASAHLAWN--PHTF 306 (389)
T ss_dssp HHHHHHHHHHHTTCEEC--CCCT
T ss_pred HHHHHHHHHHHcCCEEE--ecCC
Confidence 78889999999999876 5654
No 211
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=85.98 E-value=1.6 Score=42.15 Aligned_cols=102 Identities=12% Similarity=0.049 Sum_probs=78.9
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-----CcchHHHHhcC-
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-----ADAVLLIAAVL- 272 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-----ADAVLLIaaiL- 272 (355)
..++++..++.|...| |+.+-..+++.+..+|+. +++||..-+-+.++.++.+....| +|.|.+=..-.
T Consensus 226 a~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik~~~~G 300 (392)
T 1tzz_A 226 GIAYAKMLRDYPLFWY----EEVGDPLDYALQAALAEF-YPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDCALSY 300 (392)
T ss_dssp HHHHHHHHTTSCCSEE----ECCSCTTCHHHHHHHTTT-CCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCCTTTTT
T ss_pred HHHHHHHHHHcCCCee----cCCCChhhHHHHHHHHhh-CCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEECccccC
Confidence 3466777777776643 455667899999999985 899999999999999999999888 89888834433
Q ss_pred CHHHHHHHHHHHHHcCCc---EEEEeC--CHHHHHHHhcc
Q 018446 273 PDLDIRYMTKICKLLGLT---ALVEVH--DEREMDRVLGI 307 (355)
Q Consensus 273 ~~~~L~~L~~~A~~LGLe---aLVEVH--~~eELerAl~l 307 (355)
+-.+...+.++|+..|+. +. +| ...++.-+..+
T Consensus 301 Git~~~~i~~~A~~~gi~~~~~~--~~~~~~~~~hl~aa~ 338 (392)
T 1tzz_A 301 GLCEYQRTLEVLKTHGWSPSRCI--PHGGHQMSLNIAAGL 338 (392)
T ss_dssp CHHHHHHHHHHHHHTTCCGGGBC--CSCCBHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCCceEe--ecHHHHHHHHHHHhC
Confidence 556778899999999998 55 45 67776666544
No 212
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=85.93 E-value=2.7 Score=36.70 Aligned_cols=106 Identities=9% Similarity=0.060 Sum_probs=60.2
Q ss_pred CCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcC----
Q 018446 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL---- 272 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL---- 272 (355)
.++.++.+...+.|-...|+-+...+..++.+.-....+. -...|..|..+||+.|.+....-
T Consensus 46 ~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~i~~a~~lG~~~v~~~~g~~~~~~ 112 (278)
T 1i60_A 46 HSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITE-------------FKGMMETCKTLGVKYVVAVPLVTEQKI 112 (278)
T ss_dssp SCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHH-------------HHHHHHHHHHHTCCEEEEECCBCSSCC
T ss_pred CCHHHHHHHHHHcCCCeeeeccccccccCCHHHHHHHHHH-------------HHHHHHHHHHcCCCEEEEecCCCCCCC
Confidence 3556666666666665555444332222332221111110 12356678888998877643321
Q ss_pred C--------HHHHHHHHHHHHHcCCcEEEEeCC--------HHHHHHHhccCCCeEEEe
Q 018446 273 P--------DLDIRYMTKICKLLGLTALVEVHD--------EREMDRVLGIEGIELIGI 315 (355)
Q Consensus 273 ~--------~~~L~~L~~~A~~LGLeaLVEVH~--------~eELerAl~l~ga~iIGI 315 (355)
+ -+.|..+.++|.+.|+...+|-|. .+++.+.++.-+.+-+|+
T Consensus 113 ~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~l~~~~~~~~~g~ 171 (278)
T 1i60_A 113 VKEEIKKSSVDVLTELSDIAEPYGVKIALEFVGHPQCTVNTFEQAYEIVNTVNRDNVGL 171 (278)
T ss_dssp CHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCTTBSSCSHHHHHHHHHHHCCTTEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCEEEEEecCCccchhcCHHHHHHHHHHhCCCCeeE
Confidence 2 135677888899999999999884 567777665323333554
No 213
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=85.85 E-value=1.1 Score=43.62 Aligned_cols=63 Identities=11% Similarity=0.092 Sum_probs=49.1
Q ss_pred HHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHc--CCcEEE-EeCCHHHHHHHhccCCCeEEEe
Q 018446 252 WQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLL--GLTALV-EVHDEREMDRVLGIEGIELIGI 315 (355)
Q Consensus 252 yQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~L--GLeaLV-EVH~~eELerAl~l~ga~iIGI 315 (355)
-++..+...|+|+|.+..+.-.+..+.++++.+++. |+..++ .+++.++++++.++ |++.|.|
T Consensus 156 ~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~-Gad~I~v 221 (404)
T 1eep_A 156 ERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISV-GADCLKV 221 (404)
T ss_dssp HHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTT-TCSEEEE
T ss_pred HHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhc-CCCEEEE
Confidence 455566778999988754444445667777777776 898887 89999999999996 9999999
No 214
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=85.84 E-value=3.1 Score=39.89 Aligned_cols=128 Identities=17% Similarity=0.241 Sum_probs=78.1
Q ss_pred HHHHHHcCceEEEEecc----------------CCCCCCCHHH--------HHHHHhcCCCCCeecc----cc------c
Q 018446 203 ARSYEKGGAACLSILTD----------------EKYFKGSFEN--------LEAVRSAGVKCPLLCK----EF------I 248 (355)
Q Consensus 203 A~~Ye~~GAaaISVLTD----------------~~fF~GS~ed--------L~~VR~a~v~lPVLrK----DF------I 248 (355)
|+.-.++|+++|=+..- ..-|+||+++ +++||++ ++.||..| || .
T Consensus 150 A~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~-v~~pv~vRls~~~~~~~g~~~ 228 (340)
T 3gr7_A 150 ARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREV-WDGPLFVRISASDYHPDGLTA 228 (340)
T ss_dssp HHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH-CCSCEEEEEESCCCSTTSCCG
T ss_pred HHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHh-cCCceEEEeccccccCCCCCH
Confidence 44445679999887622 2358999764 5577876 68898654 22 1
Q ss_pred cCHHHHHH-HHHcCCcchHHHHhcCC-------H-HHHHHHHHHHHHcCCcEEEE--eCCHHHHHHHhccCC-CeEEEee
Q 018446 249 VDAWQIYY-ARTKGADAVLLIAAVLP-------D-LDIRYMTKICKLLGLTALVE--VHDEREMDRVLGIEG-IELIGIN 316 (355)
Q Consensus 249 IdpyQI~e-Ar~~GADAVLLIaaiL~-------~-~~L~~L~~~A~~LGLeaLVE--VH~~eELerAl~l~g-a~iIGIN 316 (355)
-+..++.+ ...+|+|.|-+...-.. + -.+....++.+.+++-.++- ++|.+++++++.. | +++|++-
T Consensus 229 ~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~-G~aD~V~iG 307 (340)
T 3gr7_A 229 KDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQN-GRADLVFLG 307 (340)
T ss_dssp GGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHT-TSCSEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHC-CCeeEEEec
Confidence 22333333 34579998877643221 1 13344445555677766553 6799999999986 6 9999986
Q ss_pred CCCCCccccChhhHHhhhcc
Q 018446 317 NRNLETFEVDNSNTKKLLEG 336 (355)
Q Consensus 317 NRdL~TfevDl~~t~~L~~~ 336 (355)
---| .|++-..++...
T Consensus 308 R~~l----anPdl~~ki~~~ 323 (340)
T 3gr7_A 308 RELL----RNPYWPYAAARE 323 (340)
T ss_dssp HHHH----HCTTHHHHHHHH
T ss_pred HHHH----hCchHHHHHHHH
Confidence 3322 345555555443
No 215
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=85.77 E-value=1.5 Score=42.20 Aligned_cols=93 Identities=6% Similarity=0.028 Sum_probs=71.8
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~ 276 (355)
..++++..++.|...| |..+-..+++.+..+|+. +++||..-+-+.++.++.+....| +|.|.+=+.-. +-.+
T Consensus 215 a~~~~~~l~~~~i~~i----E~P~~~~~~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~ 289 (392)
T 2poz_A 215 TIRFCRKIGELDICFV----EEPCDPFDNGALKVISEQ-IPLPIAVGERVYTRFGFRKIFELQACGIIQPDIGTAGGLME 289 (392)
T ss_dssp HHHHHHHHGGGCEEEE----ECCSCTTCHHHHHHHHHH-CSSCEEECTTCCHHHHHHHHHTTTCCSEECCCTTTSSCHHH
T ss_pred HHHHHHHHHhcCCCEE----ECCCCcccHHHHHHHHhh-CCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHH
Confidence 3466777777775433 444556789999999986 899999999999999999988877 78877734333 5567
Q ss_pred HHHHHHHHHHcCCcEEEEeCCH
Q 018446 277 IRYMTKICKLLGLTALVEVHDE 298 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH~~ 298 (355)
...+.++|+..|+.+.+ |+.
T Consensus 290 ~~~i~~~A~~~g~~~~~--h~~ 309 (392)
T 2poz_A 290 TKKICAMAEAYNMRVAP--HVC 309 (392)
T ss_dssp HHHHHHHHHTTTCEECC--CCC
T ss_pred HHHHHHHHHHcCCeEec--CCC
Confidence 78899999999998776 653
No 216
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=85.72 E-value=2 Score=41.87 Aligned_cols=93 Identities=11% Similarity=0.064 Sum_probs=76.0
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCC-HHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLP-DLDI 277 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~-~~~L 277 (355)
...+++..++.|..-| |+.+-.++++.+..+|+. +++||..-+-+.++++..+....|+|.|.+=+.-.+ -.+.
T Consensus 207 A~~~~~~L~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~d~v~~k~~~~GGit~~ 281 (393)
T 4dwd_A 207 AIRVGRALEDLGYSWF----EEPVQHYHVGAMGEVAQR-LDITVSAGEQTYTLQALKDLILSGVRMVQPDIVKMGGITGM 281 (393)
T ss_dssp HHHHHHHHHHTTCSEE----ECCSCTTCHHHHHHHHHH-CSSEEEBCTTCCSHHHHHHHHHHTCCEECCCTTTTTHHHHH
T ss_pred HHHHHHHHHhhCCCEE----ECCCCcccHHHHHHHHhh-CCCCEEecCCcCCHHHHHHHHHcCCCEEEeCccccCCHHHH
Confidence 3467788888886655 455667899999999986 899999999999999999998888999888555553 4567
Q ss_pred HHHHHHHHHcCCcEEEEeCCH
Q 018446 278 RYMTKICKLLGLTALVEVHDE 298 (355)
Q Consensus 278 ~~L~~~A~~LGLeaLVEVH~~ 298 (355)
..+.++|+..|+.+. +|+.
T Consensus 282 ~~ia~~A~~~gi~~~--~h~~ 300 (393)
T 4dwd_A 282 MQCAALAHAHGVEFV--PHQT 300 (393)
T ss_dssp HHHHHHHHHHTCEEC--CCCC
T ss_pred HHHHHHHHHcCCEEe--ecCC
Confidence 789999999999865 7776
No 217
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=85.69 E-value=1.7 Score=41.48 Aligned_cols=118 Identities=13% Similarity=0.094 Sum_probs=84.5
Q ss_pred cHHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCC
Q 018446 162 DFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCP 241 (355)
Q Consensus 162 dF~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lP 241 (355)
....++++.. ....+..+. . |-+... + .++++..++.|..-| |+.+-..+++.+..+|+. +++|
T Consensus 178 ~~v~avr~a~---~~~~l~vDa-----n-~~~~~~-~-~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~ip 241 (375)
T 1r0m_A 178 QPVRATREAF---PDIRLTVDA-----N-SAYTLA-D-AGRLRQLDEYDLTYI----EQPLAWDDLVDHAELARR-IRTP 241 (375)
T ss_dssp HHHHHHHHHC---TTSCEEEEC-----T-TCCCGG-G-HHHHHTTGGGCCSCE----ECCSCTTCSHHHHHHHHH-CSSC
T ss_pred HHHHHHHHHc---CCCeEEEeC-----C-CCCCHH-H-HHHHHHHHhCCCcEE----ECCCCcccHHHHHHHHHh-CCCC
Confidence 3455666542 224566664 1 223333 4 677888888776544 444566789999999986 8999
Q ss_pred eeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHHHHHHHHHHHHcCCcEEEEe
Q 018446 242 LLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLDIRYMTKICKLLGLTALVEV 295 (355)
Q Consensus 242 VLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~L~~L~~~A~~LGLeaLVEV 295 (355)
|..-+-+.++.++.+....| +|.|.+=+.-. +-.+...+.++|+..|+.+++--
T Consensus 242 Ia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 297 (375)
T 1r0m_A 242 LCLDESVASASDARKALALGAGGVINLKVARVGGHAESRRVHDVAQSFGAPVWCGG 297 (375)
T ss_dssp EEESTTCCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECC
T ss_pred EEecCccCCHHHHHHHHHhCCCCEEEECcchhcCHHHHHHHHHHHHHcCCcEEecC
Confidence 99999999999999988777 78877744444 45677889999999999986643
No 218
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=85.69 E-value=0.85 Score=43.17 Aligned_cols=74 Identities=16% Similarity=0.075 Sum_probs=54.7
Q ss_pred CCHHHHHHHHHHcCceEEEEe----c--------cC------CC--CC--CCHHHHHHHHhcCC-CCCeeccccccCHHH
Q 018446 197 FDPVEIARSYEKGGAACLSIL----T--------DE------KY--FK--GSFENLEAVRSAGV-KCPLLCKEFIVDAWQ 253 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVL----T--------D~------~f--F~--GS~edL~~VR~a~v-~lPVLrKDFIIdpyQ 253 (355)
.++. .|+..+++||++|.|= | -. .| .. ..++.|..++++ + ++||+.-==|-++.+
T Consensus 193 ~~~e-~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~-~~~ipvia~GGI~~~~d 270 (332)
T 1vcf_A 193 LSRE-AALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREV-LPHLPLVASGGVYTGTD 270 (332)
T ss_dssp CCHH-HHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHH-CSSSCEEEESSCCSHHH
T ss_pred CCHH-HHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHh-cCCCeEEEECCCCCHHH
Confidence 4454 5788889999999882 1 11 11 11 245667888876 6 799999999999999
Q ss_pred HHHHHHcCCcchHHHHhcC
Q 018446 254 IYYARTKGADAVLLIAAVL 272 (355)
Q Consensus 254 I~eAr~~GADAVLLIaaiL 272 (355)
+.++..+|||+|.+=-.+|
T Consensus 271 ~~kal~~GAd~V~igr~~l 289 (332)
T 1vcf_A 271 GAKALALGADLLAVARPLL 289 (332)
T ss_dssp HHHHHHHTCSEEEECGGGH
T ss_pred HHHHHHhCCChHhhhHHHH
Confidence 9999999999997644443
No 219
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=85.51 E-value=2.7 Score=40.05 Aligned_cols=117 Identities=15% Similarity=0.169 Sum_probs=82.4
Q ss_pred HHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHH---HHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCC
Q 018446 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPV---EIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVK 239 (355)
Q Consensus 163 F~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~---~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~ 239 (355)
...++++... ....+..+. +..+++. ++++.+++.|..- + |+.+-.++++.+..+|+. ++
T Consensus 172 ~v~avR~a~g--~~~~l~vDa----------n~~~~~~~a~~~~~~L~~~~i~~---i-EqP~~~~d~~~~~~l~~~-~~ 234 (354)
T 3jva_A 172 RVKAIREAVG--FDIKLRLDA----------NQAWTPKDAVKAIQALADYQIEL---V-EQPVKRRDLEGLKYVTSQ-VN 234 (354)
T ss_dssp HHHHHHHHHC--TTSEEEEEC----------TTCSCHHHHHHHHHHTTTSCEEE---E-ECCSCTTCHHHHHHHHHH-CS
T ss_pred HHHHHHHHcC--CCCeEEEEC----------CCCCCHHHHHHHHHHHHhcCCCE---E-ECCCChhhHHHHHHHHHh-CC
Confidence 3445555431 234566664 2234544 5667777666443 3 445667899999999986 89
Q ss_pred CCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHHHHHHHHHHHHcCCcEEEEeC
Q 018446 240 CPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLDIRYMTKICKLLGLTALVEVH 296 (355)
Q Consensus 240 lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~L~~L~~~A~~LGLeaLVEVH 296 (355)
+||..-+-+.+++++.+....| +|.|.+=..-. +-.+...+.++|+..|+.+.+-..
T Consensus 235 iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~ 293 (354)
T 3jva_A 235 TTIMADESCFDAQDALELVKKGTVDVINIKLMKCGGIHEALKINQICETAGIECMIGCM 293 (354)
T ss_dssp SEEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCEEEcCCcCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCeEEecCC
Confidence 9999999999999998887765 68887744443 556778899999999999886443
No 220
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=85.50 E-value=1.2 Score=42.80 Aligned_cols=68 Identities=22% Similarity=0.252 Sum_probs=41.8
Q ss_pred CHHHHHHHHHcCC--------cchHH----HHhcCCHHHHHHHHHHHHHc--CCcEEEEeCCHHHHHHHhccCCCeEEEe
Q 018446 250 DAWQIYYARTKGA--------DAVLL----IAAVLPDLDIRYMTKICKLL--GLTALVEVHDEREMDRVLGIEGIELIGI 315 (355)
Q Consensus 250 dpyQI~eAr~~GA--------DAVLL----IaaiL~~~~L~~L~~~A~~L--GLeaLVEVH~~eELerAl~l~ga~iIGI 315 (355)
-..|-|-.+.-|+ |+||+ |++.=+ +..-++.+++. +....|||+|.+|++.|+.+ |+++|..
T Consensus 160 r~l~kyAv~~GGg~nHR~gL~d~vlikdNHi~~~G~---i~~Av~~~r~~~p~~~ieVEvdtlde~~eAl~a-GaD~I~L 235 (298)
T 3gnn_A 160 RLAQKYAVRVGGGANQRLALYAGILIKENHIAAAGG---VGEALDAAFALNAEVPVQIEVETLDQLRTALAH-GARSVLL 235 (298)
T ss_dssp HHHHHHHHHHTTCCCC-------------------C---HHHHHHHHHHHC--CCCEEEESSHHHHHHHHHT-TCEEEEE
T ss_pred HHHHHhhHHhcCccceecCCCcEEEEeHHHHHHcCC---HHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHc-CCCEEEE
Confidence 3466777777776 56666 333322 33334444443 46778999999999999996 9999999
Q ss_pred eCCCCC
Q 018446 316 NNRNLE 321 (355)
Q Consensus 316 NNRdL~ 321 (355)
.|-++.
T Consensus 236 Dn~~~~ 241 (298)
T 3gnn_A 236 DNFTLD 241 (298)
T ss_dssp ESCCHH
T ss_pred CCCCHH
Confidence 996553
No 221
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=85.47 E-value=12 Score=33.04 Aligned_cols=130 Identities=18% Similarity=0.103 Sum_probs=80.6
Q ss_pred cHHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCC-CCCCCHHHHHHHHhcCCCC
Q 018446 162 DFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEK-YFKGSFENLEAVRSAGVKC 240 (355)
Q Consensus 162 dF~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~-fF~GS~edL~~VR~a~v~l 240 (355)
.|.+.|..... .++..+..|+|...... +. -...+++.+.+ .+.- +...+.+.|..+|+...++
T Consensus 81 tL~evl~~~~~-~~~~~l~iEiK~~~~~~----~~-~~~~v~~~l~~---------~~~v~i~Sf~~~~l~~~~~~~p~~ 145 (224)
T 1vd6_A 81 RLEEVLALKEA-FPQAVFNVELKSFPGLG----EE-AARRLAALLRG---------REGVWVSSFDPLALLALRKAAPGL 145 (224)
T ss_dssp BHHHHHGGGGT-CTTCEEEEEECCCTTSH----HH-HHHHHHHHTTT---------CSSEEEEESCHHHHHHHHHHCTTS
T ss_pred CHHHHHHhhhc-cCCceEEEEECCCCCcc----HH-HHHHHHHHHhc---------CCcEEEEeCCHHHHHHHHHHCCCC
Confidence 45555544320 13467999999543320 00 01234444443 1111 1224678899998754556
Q ss_pred C--eeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEE-eCCHHHHHHHhccCCCeEEEee
Q 018446 241 P--LLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVE-VHDEREMDRVLGIEGIELIGIN 316 (355)
Q Consensus 241 P--VLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVE-VH~~eELerAl~l~ga~iIGIN 316 (355)
| .|..++. ...++..|+|+|-.-...+++ .+++.+++.|+.+.+= |.+.+++++.++. |++.|--|
T Consensus 146 ~~~~l~~~~~-----~~~~~~~~~~~i~~~~~~~~~----~~v~~~~~~G~~v~~wtvn~~~~~~~l~~~-GvdgI~TD 214 (224)
T 1vd6_A 146 PLGFLMAEDH-----SALLPCLGVEAVHPHHALVTE----EAVAGWRKRGLFVVAWTVNEEGEARRLLAL-GLDGLIGD 214 (224)
T ss_dssp CEEEEESSCC-----GGGGGGSCCSEEEEBGGGCCH----HHHHHHHHTTCEEEEECCCCHHHHHHHHHT-TCSEEEES
T ss_pred CEEEEecccc-----HHHHHHcCCcEEecCcccCCH----HHHHHHHHCCCEEEEEeCCCHHHHHHHHhc-CCCEEEcC
Confidence 6 3433322 234567899988776666764 6789999999998875 6899999999997 88877544
No 222
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=85.36 E-value=0.8 Score=44.39 Aligned_cols=77 Identities=18% Similarity=0.064 Sum_probs=60.2
Q ss_pred HHHHHHHHHHcCceEEEEecc--CCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcCCHH
Q 018446 199 PVEIARSYEKGGAACLSILTD--EKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPDL 275 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD--~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL~~~ 275 (355)
..++|+..++.|++.|.|-.- .....+..+.+..+|++ +++||+.--=| ++.+..++...| ||+|-+-=++|.+-
T Consensus 253 ~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~-~~iPvi~~Ggi-t~~~a~~~l~~g~aD~V~~gR~~l~~P 330 (364)
T 1vyr_A 253 ALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRER-FHGVIIGAGAY-TAEKAEDLIGKGLIDAVAFGRDYIANP 330 (364)
T ss_dssp HHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHH-CCSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCT
T ss_pred HHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHH-CCCCEEEECCc-CHHHHHHHHHCCCccEEEECHHHHhCh
Confidence 456899999999999998642 11123467888999986 89999887666 999999999998 99998877777654
Q ss_pred HH
Q 018446 276 DI 277 (355)
Q Consensus 276 ~L 277 (355)
++
T Consensus 331 ~~ 332 (364)
T 1vyr_A 331 DL 332 (364)
T ss_dssp TH
T ss_pred hH
Confidence 44
No 223
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=85.20 E-value=2.5 Score=41.00 Aligned_cols=161 Identities=16% Similarity=0.133 Sum_probs=101.1
Q ss_pred CCceEEeEeeecCCC------CCCCCCCCCHHHHHHHHH-HcCceEEEEe---ccCCCCCCCHHHHH----HHHhcCCCC
Q 018446 175 GLPALIAEVKKASPS------RGILREDFDPVEIARSYE-KGGAACLSIL---TDEKYFKGSFENLE----AVRSAGVKC 240 (355)
Q Consensus 175 g~~aVIAEvKRaSPS------kG~I~~~~Dp~~iA~~Ye-~~GAaaISVL---TD~~fF~GS~edL~----~VR~a~v~l 240 (355)
++|.++.||--.+|- .-.-...-++.++|+.+. +.||+.|-|- |+|..-.=+.+.+. .+++. +++
T Consensus 52 n~p~iam~V~D~~pe~~~~v~~~~~~~~~~~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~-~~v 130 (323)
T 4djd_D 52 NRPVIGMEVQDIVPDWPDVLKDPFTDVINEPGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQA-VGV 130 (323)
T ss_dssp SCCEEEEEEESSCCSCCHHHHGGGTTTTTCHHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHH-CCS
T ss_pred CCCeEEEEEecCCccchhhHHHHHHHHHHhHHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhh-CCc
Confidence 567899999999887 211122457999999998 9999999995 66654444555443 44554 788
Q ss_pred Ceecc---ccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHhccCCCeEEEee
Q 018446 241 PLLCK---EFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH-DEREMDRVLGIEGIELIGIN 316 (355)
Q Consensus 241 PVLrK---DFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH-~~eELerAl~l~ga~iIGIN 316 (355)
||--. +---++-=+.+|..+||+...+|-++-.+ .+..+...|.++|.-+++--. |.+.+++.... +.=.||.
T Consensus 131 PlsIDg~~~~T~~~eV~eaAleagag~~~lINsv~~~-~~~~m~~laa~~g~~vVlmh~~d~~~~~~l~~~--a~~~GI~ 207 (323)
T 4djd_D 131 PLVVVGCGDVEKDHEVLEAVAEAAAGENLLLGNAEQE-NYKSLTAACMVHKHNIIARSPLDINICKQLNIL--INEMNLP 207 (323)
T ss_dssp CEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEEBTT-BCHHHHHHHHHHTCEEEEECSSCHHHHHHHHHH--HHTTTCC
T ss_pred eEEEECCCCCCCCHHHHHHHHHhcCCCCCeEEECCcc-cHHHHHHHHHHhCCeEEEEccchHHHHHHHHHH--HHHcCCC
Confidence 86311 12223445667777899976666666654 457889999999998888532 44444433321 1122332
Q ss_pred CCC------CCccccChhhHHhhhccccc
Q 018446 317 NRN------LETFEVDNSNTKKLLEGERG 339 (355)
Q Consensus 317 NRd------L~TfevDl~~t~~L~~~~~~ 339 (355)
..| +-+|..+++.+..++..++.
T Consensus 208 ~e~IIlDPg~g~fgk~~e~~l~~l~~ir~ 236 (323)
T 4djd_D 208 LDHIVIDPSIGGLGYGIEYSFSIMERIRL 236 (323)
T ss_dssp GGGEEEECCCCCTTTTHHHHHHHHHHHHH
T ss_pred HHHEEEeCCCccccCCHHHHHHHHHHHHH
Confidence 221 22466677777777665553
No 224
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=85.12 E-value=4.9 Score=36.44 Aligned_cols=63 Identities=21% Similarity=0.167 Sum_probs=43.9
Q ss_pred HHHHHHHcCCcchHHHHhcCC----------------------HHHHHHHHHHHHHcCCcEEEEeC------CHHHHHHH
Q 018446 253 QIYYARTKGADAVLLIAAVLP----------------------DLDIRYMTKICKLLGLTALVEVH------DEREMDRV 304 (355)
Q Consensus 253 QI~eAr~~GADAVLLIaaiL~----------------------~~~L~~L~~~A~~LGLeaLVEVH------~~eELerA 304 (355)
.|..|..+||..|.+...... -+.|.++.++|.+.|+...+|-| +.+++.+.
T Consensus 116 ~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~l 195 (340)
T 2zds_A 116 TARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVRFAHEVHPSEIAYDYWTTHRA 195 (340)
T ss_dssp HHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEECCTTSSCCSHHHHHHH
T ss_pred HHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHcCCEEEEEcCCCcccCCHHHHHHH
Confidence 467788999998876533211 12567788899999999999987 66788777
Q ss_pred hccCC-CeEEEe
Q 018446 305 LGIEG-IELIGI 315 (355)
Q Consensus 305 l~l~g-a~iIGI 315 (355)
++.-+ .+-+|+
T Consensus 196 l~~v~~~~~vg~ 207 (340)
T 2zds_A 196 LEAVGHRPAFGL 207 (340)
T ss_dssp HHHTTTCTTEEE
T ss_pred HHhcCCCCCeeE
Confidence 76423 334665
No 225
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=85.12 E-value=1.6 Score=42.17 Aligned_cols=93 Identities=13% Similarity=0.075 Sum_probs=71.5
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~ 276 (355)
..++++..++.|... +-| .+-..+++.+..+|+. +++||..-+-+.+++++.+....| +|.|.+=+.-. +-.+
T Consensus 234 ai~~~~~l~~~~i~~---iE~-P~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~ 308 (410)
T 2gl5_A 234 AIQFAKAIEKYRIFL---YEE-PIHPLNSDNMQKVSRS-TTIPIATGERSYTRWGYRELLEKQSIAVAQPDLCLCGGITE 308 (410)
T ss_dssp HHHHHHHHGGGCEEE---EEC-SSCSSCHHHHHHHHHH-CSSCEEECTTCCTTHHHHHHHHTTCCSEECCCTTTTTHHHH
T ss_pred HHHHHHHHHhcCCCe---EEC-CCChhhHHHHHHHHhh-CCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHH
Confidence 346677777766543 334 4556789999999986 899999999999999999998887 68877744444 3456
Q ss_pred HHHHHHHHHHcCCcEEEEeCCH
Q 018446 277 IRYMTKICKLLGLTALVEVHDE 298 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH~~ 298 (355)
...+.++|+..|+.+.+ |+.
T Consensus 309 ~~~ia~~A~~~gi~~~~--h~~ 328 (410)
T 2gl5_A 309 GKKICDYANIYDTTVQV--HVC 328 (410)
T ss_dssp HHHHHHHHHTTTCEECC--CCC
T ss_pred HHHHHHHHHHcCCeEee--cCC
Confidence 77889999999999766 654
No 226
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=85.11 E-value=3.3 Score=39.93 Aligned_cols=87 Identities=13% Similarity=0.123 Sum_probs=66.8
Q ss_pred HHHHHHHHHH--cCceEEEEeccCCCCCCCHHHHHHHHhcCC-CCCeeccccccCHHHHHHHHHcC-CcchHHHHhcCCH
Q 018446 199 PVEIARSYEK--GGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD 274 (355)
Q Consensus 199 p~~iA~~Ye~--~GAaaISVLTD~~fF~GS~edL~~VR~a~v-~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL~~ 274 (355)
..++++..++ .|... + |+.+-.++++.+..+|+. + ++||..-+-+ ++.++.+....| +|.|.+= =+-
T Consensus 206 a~~~~~~l~~~g~~i~~---i-EqP~~~~~~~~~~~l~~~-~~~iPIa~dE~~-~~~~~~~~i~~~~~d~v~ik---GGi 276 (389)
T 2oz8_A 206 ALTKLVAIREAGHDLLW---V-EDPILRHDHDGLRTLRHA-VTWTQINSGEYL-DLQGKRLLLEAHAADILNVH---GQV 276 (389)
T ss_dssp HHHHHHHHHHTTCCCSE---E-ESCBCTTCHHHHHHHHHH-CCSSEEEECTTC-CHHHHHHHHHTTCCSEEEEC---SCH
T ss_pred HHHHHHHHHhcCCCceE---E-eCCCCCcCHHHHHHHHhh-CCCCCEEeCCCC-CHHHHHHHHHcCCCCEEEEC---cCH
Confidence 3467778888 45433 2 555667899999999986 8 8999999999 999999998888 5766553 333
Q ss_pred HHHHHHHHHHHHcCCcEEEE
Q 018446 275 LDIRYMTKICKLLGLTALVE 294 (355)
Q Consensus 275 ~~L~~L~~~A~~LGLeaLVE 294 (355)
.+...+.++|+..|+.+.+-
T Consensus 277 t~a~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 277 TDVMRIGWLAAELGIPISIG 296 (389)
T ss_dssp HHHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHHHcCCeEeec
Confidence 45678889999999996665
No 227
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=84.86 E-value=2.8 Score=39.53 Aligned_cols=90 Identities=19% Similarity=0.214 Sum_probs=69.3
Q ss_pred HHHHHHHHHHcCce--EEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHH-HHhcCCH
Q 018446 199 PVEIARSYEKGGAA--CLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLL-IAAVLPD 274 (355)
Q Consensus 199 p~~iA~~Ye~~GAa--aISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLL-IaaiL~~ 274 (355)
..++++..++.|.. .| |+.+-..+++.+..+|+. +++||..-+-+.+++++.+....| +|.|.+ +.. =+-
T Consensus 198 a~~~~~~l~~~~i~~~~i----E~P~~~~~~~~~~~l~~~-~~ipia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~-GGi 271 (345)
T 2zad_A 198 AVEFARAVYQKGIDIAVY----EQPVRREDIEGLKFVRFH-SPFPVAADESARTKFDVMRLVKEEAVDYVNIKLMK-SGI 271 (345)
T ss_dssp HHHHHHHHHHTTCCCSEE----ECCSCTTCHHHHHHHHHH-SSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHH-HHH
T ss_pred HHHHHHHHHhcCCCeeee----eCCCCcccHHHHHHHHHh-CCCCEEEeCCcCCHHHHHHHHHhCCCCEEEEeccc-ccH
Confidence 34677788888866 43 444566889999999986 899999999999999999988777 677766 233 233
Q ss_pred HHHHHHHHHHHHcCCcEEEE
Q 018446 275 LDIRYMTKICKLLGLTALVE 294 (355)
Q Consensus 275 ~~L~~L~~~A~~LGLeaLVE 294 (355)
.+...+.++|+..|+.+.+-
T Consensus 272 t~~~~i~~~A~~~g~~~~~~ 291 (345)
T 2zad_A 272 SDALAIVEIAESSGLKLMIG 291 (345)
T ss_dssp HHHHHHHHHHHTTTCEEEEC
T ss_pred HHHHHHHHHHHHcCCeEEEe
Confidence 45677889999999996654
No 228
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=84.70 E-value=0.82 Score=43.54 Aligned_cols=88 Identities=18% Similarity=0.195 Sum_probs=66.0
Q ss_pred CHHHHHHHHHHcCceEEEEecc----C--CCCCC-CHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHH
Q 018446 198 DPVEIARSYEKGGAACLSILTD----E--KYFKG-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIA 269 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD----~--~fF~G-S~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIa 269 (355)
+..++|+.+++.|++.|.|-.- . ....| .++.+..+|++ +++||+.--=|-++.+..++...| ||+|.+--
T Consensus 230 ~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~-~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR 308 (338)
T 1z41_A 230 DHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQ-ADMATGAVGMITDGSMAEEILQNGRADLIFIGR 308 (338)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH-HCCEEEECSSCCSHHHHHHHHHTTSCSEEEECH
T ss_pred HHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHH-CCCCEEEECCCCCHHHHHHHHHcCCceEEeecH
Confidence 4678999999999999998532 1 11222 46888899986 899999988888999999999999 99998876
Q ss_pred hcCCHHHHHHHHHHHHHcC
Q 018446 270 AVLPDLDIRYMTKICKLLG 288 (355)
Q Consensus 270 aiL~~~~L~~L~~~A~~LG 288 (355)
++|.+-++- .++...++
T Consensus 309 ~~i~nPdl~--~ki~~~~~ 325 (338)
T 1z41_A 309 ELLRDPFFA--RTAAKQLN 325 (338)
T ss_dssp HHHHCTTHH--HHHHHHTT
T ss_pred HHHhCchHH--HHHHcCCC
Confidence 666554442 24444444
No 229
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=84.69 E-value=3.8 Score=39.16 Aligned_cols=68 Identities=16% Similarity=0.183 Sum_probs=56.9
Q ss_pred CHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHH-HHhcCCHHHHHHHHHHHHHcCCcEEEE
Q 018446 226 SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLL-IAAVLPDLDIRYMTKICKLLGLTALVE 294 (355)
Q Consensus 226 S~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLL-IaaiL~~~~L~~L~~~A~~LGLeaLVE 294 (355)
+++.+..+|+. +++||..-+-+.++.++.+....| +|.|.+ ...+=+-.+...+.++|+..|+.+.+-
T Consensus 225 d~~~~~~l~~~-~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~ 294 (378)
T 2qdd_A 225 TLDQCAHVARR-VANPIMLDECLHEFSDHLAAWSRGACEGVKIKPNRVGGLTRARQIRDFGVSVGWQMHIE 294 (378)
T ss_dssp SHHHHHHHHTT-CCSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEEC
T ss_pred CHHHHHHHHHh-CCCCEEECCCcCCHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEec
Confidence 99999999985 899999999999999999887766 788887 444435667788999999999996654
No 230
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=84.49 E-value=2.4 Score=41.74 Aligned_cols=100 Identities=5% Similarity=-0.022 Sum_probs=76.6
Q ss_pred HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHHH
Q 018446 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLDI 277 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~L 277 (355)
..+++..++.|...| |+.+-.++++.+..+|+. +++||..-+-+.++++..+....| +|.|.+=+.-+ +-.+.
T Consensus 247 i~~~~~Le~~~i~~i----EeP~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~li~~~a~D~v~ik~~~~GGit~a 321 (412)
T 3stp_A 247 KRMLPKLAPYEPRWL----EEPVIADDVAGYAELNAM-NIVPISGGEHEFSVIGCAELINRKAVSVLQYDTNRVGGITAA 321 (412)
T ss_dssp HHHHHHHGGGCCSEE----ECCSCTTCHHHHHHHHHT-CSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTHHHHH
T ss_pred HHHHHHHHhcCCCEE----ECCCCcccHHHHHHHHhC-CCCCEEeCCCCCCHHHHHHHHHcCCCCEEecChhhcCCHHHH
Confidence 456788888887665 555667899999999996 899999999999999999998876 78887744444 34567
Q ss_pred HHHHHHHHHcCCcEEEEeCCHHHHHHH
Q 018446 278 RYMTKICKLLGLTALVEVHDEREMDRV 304 (355)
Q Consensus 278 ~~L~~~A~~LGLeaLVEVH~~eELerA 304 (355)
..+..+|+..|+.+.+-.-...-+.-+
T Consensus 322 ~kia~~A~a~gi~v~~h~~~aa~~hla 348 (412)
T 3stp_A 322 QKINAIAEAAQIPVIPHAGQMHNYHLT 348 (412)
T ss_dssp HHHHHHHHHHTCCBCCSSCSHHHHHHH
T ss_pred HHHHHHHHHcCCEEEeccHHHHHHHHH
Confidence 788999999999977544333333333
No 231
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=84.43 E-value=0.72 Score=43.67 Aligned_cols=96 Identities=20% Similarity=0.169 Sum_probs=67.4
Q ss_pred CccHHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEecc-CCCC---CCCHHHHHHHHh
Q 018446 160 ARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTD-EKYF---KGSFENLEAVRS 235 (355)
Q Consensus 160 ~rdF~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD-~~fF---~GS~edL~~VR~ 235 (355)
+..+...++.. + ..||.-+ +..+.|+..++.||++|.|-.- .... ..+++.+..+++
T Consensus 99 p~~~i~~l~~~----g-~~v~~~v--------------~~~~~a~~~~~~GaD~i~v~g~~~GG~~g~~~~~~ll~~i~~ 159 (332)
T 2z6i_A 99 PSKYMERFHEA----G-IIVIPVV--------------PSVALAKRMEKIGADAVIAEGMEAGGHIGKLTTMTLVRQVAT 159 (332)
T ss_dssp GGGTHHHHHHT----T-CEEEEEE--------------SSHHHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHH
T ss_pred hHHHHHHHHHc----C-CeEEEEe--------------CCHHHHHHHHHcCCCEEEEECCCCCCCCCCccHHHHHHHHHH
Confidence 35677777653 3 3566544 1235678888899999998431 1111 124678888888
Q ss_pred cCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHH
Q 018446 236 AGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDL 275 (355)
Q Consensus 236 a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~ 275 (355)
. +++||+.-==|-++-++.++..+|||+|.+--+++...
T Consensus 160 ~-~~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~~l~~~ 198 (332)
T 2z6i_A 160 A-ISIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAK 198 (332)
T ss_dssp H-CSSCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTBT
T ss_pred h-cCCCEEEECCCCCHHHHHHHHHcCCCEEEecHHHhcCc
Confidence 6 89999886555679999999999999999877776543
No 232
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=84.32 E-value=3.7 Score=37.05 Aligned_cols=136 Identities=13% Similarity=0.108 Sum_probs=85.4
Q ss_pred ccHHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCC-CCCHHHHHHHHhcCCC
Q 018446 161 RDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYF-KGSFENLEAVRSAGVK 239 (355)
Q Consensus 161 rdF~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF-~GS~edL~~VR~a~v~ 239 (355)
..|.+.|.... .....+..|+|..... .+. -...+++...+.|.. +.-.| .-+.+.|..+|+...+
T Consensus 100 PtL~evL~~~~--~~~~~l~iEiK~~~~~----~~~-~~~~v~~~l~~~~~~------~~vii~SF~~~~l~~~~~~~p~ 166 (252)
T 2pz0_A 100 PTLYEVFELIG--DKDFLVNIEIKSGIVL----YPG-IEEKLIKAIKEYNFE------ERVIISSFNHYSLRDVKKMAPH 166 (252)
T ss_dssp CBHHHHHHHHT--TSCCEEEEEECCSSCC----CTT-HHHHHHHHHHHTTCT------TTEEEEESBHHHHHHHHHHCTT
T ss_pred CCHHHHHHHhh--hcCCeEEEEeCCCCcc----cHH-HHHHHHHHHHhcCCC------CCEEEEeCCHHHHHHHHHHCCC
Confidence 34666665432 1246799999954321 011 123455666665532 22122 2467888888875455
Q ss_pred CCe--eccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEE-EeCCHHHHHHHhccCCCeEEEee
Q 018446 240 CPL--LCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALV-EVHDEREMDRVLGIEGIELIGIN 316 (355)
Q Consensus 240 lPV--LrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLV-EVH~~eELerAl~l~ga~iIGIN 316 (355)
+|+ |..+..-+.. ..++..|+|++-.-...+++ .+++.+++.|+.+.+ -|++.+++++.+++ |++-|--|
T Consensus 167 ~~~~~l~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~----~~v~~~~~~G~~v~~wTvn~~~~~~~l~~~-GvdgIiTD 239 (252)
T 2pz0_A 167 LKIGLLYQCGLVEPW--HMALRMEAYSLHPFYFNIIP----ELVEGCKKNGVKLFPWTVDRKEDMERMIKA-GVDGIITD 239 (252)
T ss_dssp SEEEEEECSBCSSTH--HHHHHTTCSEEEEBGGGCCH----HHHHHHHHTTCEECCBCCCSHHHHHHHHHH-TCSEEEES
T ss_pred CCEEEEecCccccHH--HHHHHcCCeEEecchhcCCH----HHHHHHHHCCCEEEEECCCCHHHHHHHHHc-CCCEEEcC
Confidence 653 3343333322 34677899998776666764 678999999998876 57899999999987 88876544
No 233
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=84.04 E-value=5.4 Score=35.30 Aligned_cols=62 Identities=16% Similarity=0.176 Sum_probs=42.4
Q ss_pred HHHHHHHcCCcchHHHHhcCC------------HHHHHHHHHHHHHcCCcEEEEe-----------CCHHHHHHHhccCC
Q 018446 253 QIYYARTKGADAVLLIAAVLP------------DLDIRYMTKICKLLGLTALVEV-----------HDEREMDRVLGIEG 309 (355)
Q Consensus 253 QI~eAr~~GADAVLLIaaiL~------------~~~L~~L~~~A~~LGLeaLVEV-----------H~~eELerAl~l~g 309 (355)
-|..|..+||+.|.+... .+ -+.|.++.++|.+.|+...+|. .+.+++.+.++.-+
T Consensus 98 ~i~~A~~lGa~~v~~~~g-~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~n~~~~~~~~~~~~~~~~~l~~~v~ 176 (269)
T 3ngf_A 98 ALHYALALDCRTLHAMSG-ITEGLDRKACEETFIENFRYAADKLAPHGITVLVEPLNTRNMPGYFIVHQLEAVGLVKRVN 176 (269)
T ss_dssp HHHHHHHTTCCEEECCBC-BCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECCCCTTTSTTBSCCCHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCEEEEccC-CCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeeCCcccCccchhcCHHHHHHHHHHhC
Confidence 366688888888776444 22 1357778889999999999995 36777777665323
Q ss_pred CeEEEe
Q 018446 310 IELIGI 315 (355)
Q Consensus 310 a~iIGI 315 (355)
.+-+|+
T Consensus 177 ~~~vg~ 182 (269)
T 3ngf_A 177 RPNVAV 182 (269)
T ss_dssp CTTEEE
T ss_pred CCCCCe
Confidence 334555
No 234
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=84.04 E-value=4.4 Score=39.18 Aligned_cols=116 Identities=15% Similarity=0.074 Sum_probs=83.2
Q ss_pred HHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCe
Q 018446 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (355)
Q Consensus 163 F~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPV 242 (355)
...++++.. ....+..+. . |-+.. -+...+++..++.|..-| |+.+-..+++.+..+|+. +++||
T Consensus 182 ~v~avR~a~---~~~~l~vDa-----n-~~~~~-~~A~~~~~~L~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPI 246 (385)
T 3i6e_A 182 RLELIARDF---PEFRVRVDY-----N-QGLEI-DEAVPRVLDVAQFQPDFI----EQPVRAHHFELMARLRGL-TDVPL 246 (385)
T ss_dssp HHHHHHHHC---TTSEEEEEC-----T-TCCCG-GGHHHHHHHHHTTCCSCE----ECCSCTTCHHHHHHHHTT-CSSCE
T ss_pred HHHHHHHhC---CCCeEEEEC-----C-CCCCH-HHHHHHHHHHHhcCCCEE----ECCCCcccHHHHHHHHHh-CCCCE
Confidence 344555543 224577664 1 22221 245678888988886554 555667889999999985 89999
Q ss_pred eccccccCHHHHHHHHHcC-CcchHHHHh-cCCHHHHHHHHHHHHHcCCcEEE
Q 018446 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAA-VLPDLDIRYMTKICKLLGLTALV 293 (355)
Q Consensus 243 LrKDFIIdpyQI~eAr~~G-ADAVLLIaa-iL~~~~L~~L~~~A~~LGLeaLV 293 (355)
..-+-+.+.+++.+....| +|.|.+=+. +=+-.+...+.++|+..|+.+.+
T Consensus 247 a~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~ 299 (385)
T 3i6e_A 247 LADESVYGPEDMVRAAHEGICDGVSIKIMKSGGLTRAQTVARIAAAHGLMAYG 299 (385)
T ss_dssp EESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEE
T ss_pred EEeCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCEEEe
Confidence 9999999999999888766 677776333 33455778899999999999865
No 235
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=84.01 E-value=0.87 Score=42.85 Aligned_cols=77 Identities=21% Similarity=0.220 Sum_probs=58.5
Q ss_pred CHHHHHHHHHHcCceEEEEec--cCCCCCC--CHHHHHHHHhcCCCCCeeccccccCHHHHHHHHH-cCCcchHHHHhcC
Q 018446 198 DPVEIARSYEKGGAACLSILT--DEKYFKG--SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYART-KGADAVLLIAAVL 272 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLT--D~~fF~G--S~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~-~GADAVLLIaaiL 272 (355)
|..++|+.+++.|+++|.|-. ....+.| .++.+..+++ ++||+.-==|-++-++.++.. .|||+|.+=-++|
T Consensus 141 ~~~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~---~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l 217 (318)
T 1vhn_A 141 EVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK---RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAI 217 (318)
T ss_dssp CHHHHHHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCC---SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGT
T ss_pred HHHHHHHHHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHc---CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHH
Confidence 566999999999999999852 1223333 4555666653 799999888899999999998 7999998876666
Q ss_pred CHHHH
Q 018446 273 PDLDI 277 (355)
Q Consensus 273 ~~~~L 277 (355)
.+..+
T Consensus 218 ~~P~l 222 (318)
T 1vhn_A 218 GRPWI 222 (318)
T ss_dssp TCTTH
T ss_pred hCcch
Confidence 65444
No 236
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=83.88 E-value=2.2 Score=36.88 Aligned_cols=105 Identities=10% Similarity=0.127 Sum_probs=66.9
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHH
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDI 277 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L 277 (355)
++.+ ++...+.||+.| |. + .|. .+.+...++ ..+|++. + +.++-++.+|..+|||+|-+...-+ ..+
T Consensus 72 ~~~~-~~~a~~~Gad~i-v~--~-~~~--~~~~~~~~~--~g~~vi~-g-~~t~~e~~~a~~~Gad~vk~~~~~~--~g~ 138 (205)
T 1wa3_A 72 SVEQ-CRKAVESGAEFI-VS--P-HLD--EEISQFCKE--KGVFYMP-G-VMTPTELVKAMKLGHTILKLFPGEV--VGP 138 (205)
T ss_dssp SHHH-HHHHHHHTCSEE-EC--S-SCC--HHHHHHHHH--HTCEEEC-E-ECSHHHHHHHHHTTCCEEEETTHHH--HHH
T ss_pred CHHH-HHHHHHcCCCEE-Ec--C-CCC--HHHHHHHHH--cCCcEEC-C-cCCHHHHHHHHHcCCCEEEEcCccc--cCH
Confidence 5654 456666899999 44 2 233 455555555 4789987 2 3468899999999999986542211 134
Q ss_pred HHHHHHHHHc-CCcEEEE--eCCHHHHHHHhccCCCeEEEeeC
Q 018446 278 RYMTKICKLL-GLTALVE--VHDEREMDRVLGIEGIELIGINN 317 (355)
Q Consensus 278 ~~L~~~A~~L-GLeaLVE--VH~~eELerAl~l~ga~iIGINN 317 (355)
..+-++...+ ++-.++. | +.+.+..++.+ |++.+++=.
T Consensus 139 ~~~~~l~~~~~~~pvia~GGI-~~~~~~~~~~~-Ga~~v~vGs 179 (205)
T 1wa3_A 139 QFVKAMKGPFPNVKFVPTGGV-NLDNVCEWFKA-GVLAVGVGS 179 (205)
T ss_dssp HHHHHHHTTCTTCEEEEBSSC-CTTTHHHHHHH-TCSCEEECH
T ss_pred HHHHHHHHhCCCCcEEEcCCC-CHHHHHHHHHC-CCCEEEECc
Confidence 4444555555 4444443 3 46788888886 888888754
No 237
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=83.68 E-value=2.5 Score=37.02 Aligned_cols=62 Identities=21% Similarity=0.210 Sum_probs=44.1
Q ss_pred HHHHHHHcCCcchHHHHhcCC-------------HHHHHHHHHHHHHcCCcEEEEeC------------CHHHHHHHhcc
Q 018446 253 QIYYARTKGADAVLLIAAVLP-------------DLDIRYMTKICKLLGLTALVEVH------------DEREMDRVLGI 307 (355)
Q Consensus 253 QI~eAr~~GADAVLLIaaiL~-------------~~~L~~L~~~A~~LGLeaLVEVH------------~~eELerAl~l 307 (355)
.|..|..+||+.|.+.....+ -+.|.++.++|.+.|+...+|-| +.+++.+.++.
T Consensus 88 ~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~~~~~~~~~~~~~~~~~~l~~~ 167 (275)
T 3qc0_A 88 AVDEAAELGADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEPLHPMYAADRACVNTLGQALDICET 167 (275)
T ss_dssp HHHHHHHTTCSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECCCCGGGTTTTBSCCCHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeECCCcccCCccccCCHHHHHHHHHH
Confidence 467788899998877664443 14588889999999999999964 46777776653
Q ss_pred CCCeEEEe
Q 018446 308 EGIELIGI 315 (355)
Q Consensus 308 ~ga~iIGI 315 (355)
-+. -+|+
T Consensus 168 ~~~-~vg~ 174 (275)
T 3qc0_A 168 LGP-GVGV 174 (275)
T ss_dssp HCT-TEEE
T ss_pred hCc-ccEE
Confidence 232 3444
No 238
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=83.64 E-value=2.4 Score=39.93 Aligned_cols=73 Identities=16% Similarity=0.205 Sum_probs=56.4
Q ss_pred HHHHHcCCcchHHHHh-------------cCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCC
Q 018446 255 YYARTKGADAVLLIAA-------------VLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLE 321 (355)
Q Consensus 255 ~eAr~~GADAVLLIaa-------------iL~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~ 321 (355)
.+....|+|.|-+.+. .+++++++.+++.|+++|+.+-+-+++.++++.++++ |++.|. +
T Consensus 182 ~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i~~al~~-G~~~i~------H 254 (426)
T 2r8c_A 182 REELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGRGTYVLAHAYTPAAIARAVRC-GVRTIE------H 254 (426)
T ss_dssp HHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHTTCCEEEEECSHHHHHHHHHT-TCSEEE------E
T ss_pred HHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHc-CCCEEe------c
Confidence 3344578888887765 7899999999999999999999999999999999996 876554 3
Q ss_pred ccccChhhHHhhh
Q 018446 322 TFEVDNSNTKKLL 334 (355)
Q Consensus 322 TfevDl~~t~~L~ 334 (355)
.+-++.+....+.
T Consensus 255 ~~~~~~~~~~~~~ 267 (426)
T 2r8c_A 255 GNLIDDETARLVA 267 (426)
T ss_dssp CTTCCHHHHHHHH
T ss_pred CCcCCHHHHHHHH
Confidence 3445555544444
No 239
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=83.62 E-value=2 Score=40.90 Aligned_cols=41 Identities=15% Similarity=0.174 Sum_probs=34.0
Q ss_pred HHHHHHHHHHcC---CcEEEEeCCHHHHHHHhccCCCeEEEeeCC
Q 018446 277 IRYMTKICKLLG---LTALVEVHDEREMDRVLGIEGIELIGINNR 318 (355)
Q Consensus 277 L~~L~~~A~~LG---LeaLVEVH~~eELerAl~l~ga~iIGINNR 318 (355)
+..-++.+++.. ....|||+|.+|++.|+.+ |+++|+..|-
T Consensus 179 i~~av~~ar~~~~~~~~I~VEV~tleea~eA~~a-GaD~I~LDn~ 222 (285)
T 1o4u_A 179 AERAVQEVRKIIPFTTKIEVEVENLEDALRAVEA-GADIVMLDNL 222 (285)
T ss_dssp HHHHHHHHHTTSCTTSCEEEEESSHHHHHHHHHT-TCSEEEEESC
T ss_pred HHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHc-CCCEEEECCC
Confidence 344566677765 6789999999999999996 9999999994
No 240
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=83.56 E-value=1.6 Score=42.07 Aligned_cols=68 Identities=18% Similarity=0.253 Sum_probs=48.1
Q ss_pred cCHHHHHHHHHcCC--------cchHH----HHhcCCHHHHHHHHHHHHHc--CCcEEEEeCCHHHHHHHhccCCCeEEE
Q 018446 249 VDAWQIYYARTKGA--------DAVLL----IAAVLPDLDIRYMTKICKLL--GLTALVEVHDEREMDRVLGIEGIELIG 314 (355)
Q Consensus 249 IdpyQI~eAr~~GA--------DAVLL----IaaiL~~~~L~~L~~~A~~L--GLeaLVEVH~~eELerAl~l~ga~iIG 314 (355)
+-..|-|-.+.-|+ |+||+ |+++=+ +..-++.+++. .+...|||.|.+|++.|+.+ |+++|.
T Consensus 157 lR~lekyAV~~GGg~nHR~gL~D~vLIKdNHi~~~G~---i~~Av~~ar~~~p~~kIeVEv~tl~e~~eAl~a-GaDiIm 232 (300)
T 3l0g_A 157 LRMLDKYSVCIGGGESYRDNLCDGVLIKDNHIASCGS---ITLAIQRLRKNLKNEYIAIECDNISQVEESLSN-NVDMIL 232 (300)
T ss_dssp CHHHHHHHHHHTTCBCSCSSTTSCEEECHHHHHHHSC---HHHHHHHHHHHSSSCCEEEEESSHHHHHHHHHT-TCSEEE
T ss_pred hhHHHHHHHHhcCCcccccCCcceEEEcHhHHHHhCC---HHHHHHHHHHhCCCCCEEEEECCHHHHHHHHHc-CCCEEE
Confidence 44577788888787 67776 332212 23334444443 57889999999999999997 999999
Q ss_pred eeCCCC
Q 018446 315 INNRNL 320 (355)
Q Consensus 315 INNRdL 320 (355)
..|-+.
T Consensus 233 LDn~s~ 238 (300)
T 3l0g_A 233 LDNMSI 238 (300)
T ss_dssp EESCCH
T ss_pred ECCCCH
Confidence 998544
No 241
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=83.53 E-value=5.6 Score=38.97 Aligned_cols=108 Identities=16% Similarity=0.098 Sum_probs=67.5
Q ss_pred HHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeec--cccccCHHHHHHHHHcCCcchHHHHhcCCHHHHH
Q 018446 201 EIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLC--KEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIR 278 (355)
Q Consensus 201 ~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLr--KDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~ 278 (355)
++|.+..+.| ++.|+.- + -+.+++....+. +..+++. .+--.+.-.+..+..+|+|.|.+=.+.-....+.
T Consensus 57 ~lA~A~a~~G--g~gvi~~--~--~s~ee~~~~i~~-~~~~~~~~~g~~~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~ 129 (361)
T 3r2g_A 57 NMANFMHSKG--AMGALHR--F--MTIEENIQEFKK-CKGPVFVSVGCTENELQRAEALRDAGADFFCVDVAHAHAKYVG 129 (361)
T ss_dssp HHHHHHHHTT--CEEBCCS--C--SCHHHHHHHHHT-CCSCCBEEECSSHHHHHHHHHHHHTTCCEEEEECSCCSSHHHH
T ss_pred HHHHHHHHcC--CCEEEeC--C--CCHHHHHHHHhh-cceEEEEEcCCCHHHHHHHHHHHHcCCCEEEEeCCCCCcHhHH
Confidence 5888887766 3445542 2 577777655442 3333322 1111123456677788999765533322223444
Q ss_pred HHHHHHHHc--CCcEEE-EeCCHHHHHHHhccCCCeEEEee
Q 018446 279 YMTKICKLL--GLTALV-EVHDEREMDRVLGIEGIELIGIN 316 (355)
Q Consensus 279 ~L~~~A~~L--GLeaLV-EVH~~eELerAl~l~ga~iIGIN 316 (355)
+.++..++. ++..++ .|.|.+++..+.++ |++.|-|-
T Consensus 130 e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~a-GaD~I~Vg 169 (361)
T 3r2g_A 130 KTLKSLRQLLGSRCIMAGNVATYAGADYLASC-GADIIKAG 169 (361)
T ss_dssp HHHHHHHHHHTTCEEEEEEECSHHHHHHHHHT-TCSEEEEC
T ss_pred HHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHc-CCCEEEEc
Confidence 556666654 899999 79999999999996 99988884
No 242
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=83.42 E-value=1.7 Score=40.80 Aligned_cols=74 Identities=20% Similarity=0.145 Sum_probs=54.0
Q ss_pred HHHHHHHHcCceEEEEec-cCCCC-----CCCHHHHHHHHhcCCCCCeecccccc-CHHHHHHHHHcCCcchHHHHhcCC
Q 018446 201 EIARSYEKGGAACLSILT-DEKYF-----KGSFENLEAVRSAGVKCPLLCKEFIV-DAWQIYYARTKGADAVLLIAAVLP 273 (355)
Q Consensus 201 ~iA~~Ye~~GAaaISVLT-D~~fF-----~GS~edL~~VR~a~v~lPVLrKDFII-dpyQI~eAr~~GADAVLLIaaiL~ 273 (355)
+.|+..++.||++|.|-. +.... ..+++.+..+++. +++||+. +..| ++-++.++..+|||+|.+--+++.
T Consensus 129 ~~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~-~~iPvia-aGGI~~~~~v~~al~~GAdgV~vGs~~~~ 206 (328)
T 2gjl_A 129 RHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANR-LRVPIIA-SGGFADGRGLVAALALGADAINMGTRFLA 206 (328)
T ss_dssp HHHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTT-CCSCEEE-ESSCCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred HHHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHh-cCCCEEE-ECCCCCHHHHHHHHHcCCCEEEECHHHHc
Confidence 356667778999998732 11111 1346788888875 7999876 5666 899999999999999998777765
Q ss_pred HHH
Q 018446 274 DLD 276 (355)
Q Consensus 274 ~~~ 276 (355)
..+
T Consensus 207 ~~e 209 (328)
T 2gjl_A 207 TRE 209 (328)
T ss_dssp SSS
T ss_pred Ccc
Confidence 443
No 243
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=83.25 E-value=2 Score=41.78 Aligned_cols=93 Identities=11% Similarity=0.009 Sum_probs=75.7
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~ 276 (355)
...+++.+++.|...| |+.+-.++++.+..+|+. +++||..-+-+.++++..+....| +|.|.+=+.-. +-.+
T Consensus 217 A~~~~~~L~~~~i~~i----EeP~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~ 291 (394)
T 3mqt_A 217 ARWTFRQLEDIDLYFI----EACLQHDDLIGHQKLAAA-INTRLCGAEMSTTRFEAQEWLEKTGISVVQSDYNRCGGVTE 291 (394)
T ss_dssp HHHHHHHTGGGCCSEE----ESCSCTTCHHHHHHHHHH-SSSEEEECTTCCHHHHHHHHHHHHCCSEECCCTTTSSCHHH
T ss_pred HHHHHHHHhhcCCeEE----ECCCCcccHHHHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHcCCCCeEecCccccCCHHH
Confidence 4578888888887665 555667899999999986 899999999999999999888765 78887755554 4567
Q ss_pred HHHHHHHHHHcCCcEEEEeCCH
Q 018446 277 IRYMTKICKLLGLTALVEVHDE 298 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH~~ 298 (355)
...+..+|+..|+.+. +|+.
T Consensus 292 ~~~ia~~A~~~gi~~~--~h~~ 311 (394)
T 3mqt_A 292 LLRIMDICEHHNAQLM--PHNW 311 (394)
T ss_dssp HHHHHHHHHHHTCEEC--CCCC
T ss_pred HHHHHHHHHHcCCEEe--ccCC
Confidence 7889999999999975 7874
No 244
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=83.05 E-value=2.7 Score=40.71 Aligned_cols=93 Identities=18% Similarity=0.201 Sum_probs=71.3
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHH-HHhcCCHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLL-IAAVLPDLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLL-IaaiL~~~~ 276 (355)
..++++..++.|...| |+.+-..+++.+..+|+. +++||..-+-+.+++++.+....| +|.|.+ +..+=+-.+
T Consensus 226 a~~~~~~l~~~~i~~i----EeP~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite 300 (410)
T 2qq6_A 226 SIRFARAMEPFGLLWL----EEPTPPENLDALAEVRRS-TSTPICAGENVYTRFDFRELFAKRAVDYVMPDVAKCGGLAE 300 (410)
T ss_dssp HHHHHHHHGGGCCSEE----ECCSCTTCHHHHHHHHTT-CSSCEEECTTCCSHHHHHHHHHTTCCSEECCBHHHHTHHHH
T ss_pred HHHHHHHHhhcCCCeE----ECCCChhhHHHHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHcCCCCEEecCccccCCHHH
Confidence 3456677777776543 444556789999999985 899999999999999999998877 788777 333323446
Q ss_pred HHHHHHHHHHcCCcEEEEeCCH
Q 018446 277 IRYMTKICKLLGLTALVEVHDE 298 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH~~ 298 (355)
...+.++|+..|+.+.+ |+.
T Consensus 301 ~~~ia~~A~~~g~~~~~--h~~ 320 (410)
T 2qq6_A 301 AKRIANLAELDYIPFAP--HNV 320 (410)
T ss_dssp HHHHHHHHHTTTCCBCC--BCC
T ss_pred HHHHHHHHHHcCCeEee--cCC
Confidence 77889999999999776 654
No 245
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=82.98 E-value=0.52 Score=40.81 Aligned_cols=77 Identities=19% Similarity=0.049 Sum_probs=52.3
Q ss_pred CHHHHHHHHHHcCceEE-EEeccCCCCCC-CH--HHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCC
Q 018446 198 DPVEIARSYEKGGAACL-SILTDEKYFKG-SF--ENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaI-SVLTD~~fF~G-S~--edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~ 273 (355)
+|.+.++.+.+.|++.+ ..++-...|.| ++ +.++.++.. ++|+ .=++.|.+-.+.++..+|||+|...-++..
T Consensus 115 ~p~~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~~i~~~~~~--~~pi-~v~GGI~~~~~~~~~~aGad~vvvGsaI~~ 191 (207)
T 3ajx_A 115 DKATRAQEVRALGAKFVEMHAGLDEQAKPGFDLNGLLAAGEKA--RVPF-SVAGGVKVATIPAVQKAGAEVAVAGGAIYG 191 (207)
T ss_dssp SHHHHHHHHHHTTCSEEEEECCHHHHTSTTCCTHHHHHHHHHH--TSCE-EEESSCCGGGHHHHHHTTCSEEEESHHHHT
T ss_pred ChHHHHHHHHHhCCCEEEEEecccccccCCCchHHHHHHhhCC--CCCE-EEECCcCHHHHHHHHHcCCCEEEEeeeccC
Confidence 57776777777799999 55443222333 22 344444431 5675 458999999999999999999998888876
Q ss_pred HHHH
Q 018446 274 DLDI 277 (355)
Q Consensus 274 ~~~L 277 (355)
.++.
T Consensus 192 ~~dp 195 (207)
T 3ajx_A 192 AADP 195 (207)
T ss_dssp SSSH
T ss_pred CCCH
Confidence 5443
No 246
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=82.88 E-value=3.2 Score=40.46 Aligned_cols=93 Identities=13% Similarity=0.113 Sum_probs=74.2
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~ 276 (355)
...+++.+++.|...| |+.+-.++++.+..+|+. +++||..-+-+.++++..+....| +|.|.+=+.-. +-.+
T Consensus 224 A~~~~~~l~~~~i~~i----EeP~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGit~ 298 (404)
T 4e5t_A 224 AKRLARRLEAYDPLWF----EEPIPPEKPEDMAEVARY-TSIPVATGERLCTKYEFSRVLETGAASILQMNLGRVGGLLE 298 (404)
T ss_dssp HHHHHHHHGGGCCSEE----ECCSCTTCHHHHHHHHHH-CSSCEEECTTCCHHHHHHHHHHHTCCSEECCCTTTSSCHHH
T ss_pred HHHHHHHHhhcCCcEE----ECCCCcccHHHHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHhCCCCEEecCccccCCHHH
Confidence 3467788888886655 445666799999999996 899999999999999999988877 68877755555 4567
Q ss_pred HHHHHHHHHHcCCcEEEEeCCH
Q 018446 277 IRYMTKICKLLGLTALVEVHDE 298 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH~~ 298 (355)
...+.++|+..|+.+ -+|+.
T Consensus 299 ~~~ia~~A~~~gi~~--~~h~~ 318 (404)
T 4e5t_A 299 AKKIAAMAECHSAQI--APHLY 318 (404)
T ss_dssp HHHHHHHHHHTTCEE--CCCCS
T ss_pred HHHHHHHHHHcCCEE--eecCC
Confidence 788999999999985 56763
No 247
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=82.74 E-value=3.1 Score=36.13 Aligned_cols=100 Identities=12% Similarity=0.165 Sum_probs=61.3
Q ss_pred HHHHHHHcCceEEEEeccCCCCCC-CHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHH-hcCCHHHHHH
Q 018446 202 IARSYEKGGAACLSILTDEKYFKG-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIA-AVLPDLDIRY 279 (355)
Q Consensus 202 iA~~Ye~~GAaaISVLTD~~fF~G-S~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIa-aiL~~~~L~~ 279 (355)
.+..+.+.||+++. +++ ..+.+...++. ..+++.- +-++.++.+|...|||.|++-. ..++ +..
T Consensus 72 ~i~~a~~~Gad~V~-------~~~~~~~~~~~~~~~--g~~~~~g--~~t~~e~~~a~~~G~d~v~v~~t~~~g---~~~ 137 (212)
T 2v82_A 72 QVDALARMGCQLIV-------TPNIHSEVIRRAVGY--GMTVCPG--CATATEAFTALEAGAQALKIFPSSAFG---PQY 137 (212)
T ss_dssp HHHHHHHTTCCEEE-------CSSCCHHHHHHHHHT--TCEEECE--ECSHHHHHHHHHTTCSEEEETTHHHHC---HHH
T ss_pred HHHHHHHcCCCEEE-------eCCCCHHHHHHHHHc--CCCEEee--cCCHHHHHHHHHCCCCEEEEecCCCCC---HHH
Confidence 56777788999985 222 34555555443 4555443 4578899999999999998521 1122 333
Q ss_pred HHHHHHHcC--CcEEEE--eCCHHHHHHHhccCCCeEEEeeC
Q 018446 280 MTKICKLLG--LTALVE--VHDEREMDRVLGIEGIELIGINN 317 (355)
Q Consensus 280 L~~~A~~LG--LeaLVE--VH~~eELerAl~l~ga~iIGINN 317 (355)
+-+++..++ +..++. | +.+++..++.+ |++.+.|=.
T Consensus 138 ~~~l~~~~~~~ipvia~GGI-~~~~i~~~~~~-Ga~gv~vGs 177 (212)
T 2v82_A 138 IKALKAVLPSDIAVFAVGGV-TPENLAQWIDA-GCAGAGLGS 177 (212)
T ss_dssp HHHHHTTSCTTCEEEEESSC-CTTTHHHHHHH-TCSEEEECT
T ss_pred HHHHHHhccCCCeEEEeCCC-CHHHHHHHHHc-CCCEEEECh
Confidence 444444444 444333 3 37778887876 888887753
No 248
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=82.65 E-value=2 Score=42.30 Aligned_cols=91 Identities=9% Similarity=0.016 Sum_probs=72.0
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCC-CCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVK-CPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDL 275 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~-lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~ 275 (355)
..++++..++.|...| |+.+-..+++.+..+|+. ++ +||..-+-+.++.++.+....| +|.|.+=..-. +-.
T Consensus 245 ai~~~~~L~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 319 (428)
T 3bjs_A 245 ARRVLPVLAEIQAGWL----EEPFACNDFASYREVAKI-TPLVPIAAGENHYTRFEFGQMLDAGAVQVWQPDLSKCGGIT 319 (428)
T ss_dssp HHHHHHHHHHTTCSCE----ECCSCTTCHHHHHHHTTT-CSSSCEEECTTCCSHHHHHHHHTTCCEEEECCBTTTSSCHH
T ss_pred HHHHHHHHHhcCCCEE----ECCCCccCHHHHHHHHHh-CCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEeCccccCCHH
Confidence 3466777888887643 455666789999999985 88 9999999999999999998877 67777734443 556
Q ss_pred HHHHHHHHHHHcCCcEEEE
Q 018446 276 DIRYMTKICKLLGLTALVE 294 (355)
Q Consensus 276 ~L~~L~~~A~~LGLeaLVE 294 (355)
+...+.++|+..|+.+.+-
T Consensus 320 ea~~ia~~A~~~gi~~~~~ 338 (428)
T 3bjs_A 320 EGIRIAAMASAYRIPINAH 338 (428)
T ss_dssp HHHHHHHHHHHTTCCBCCB
T ss_pred HHHHHHHHHHHcCCeEEec
Confidence 7788999999999997665
No 249
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=82.62 E-value=3.6 Score=39.34 Aligned_cols=117 Identities=10% Similarity=0.070 Sum_probs=83.5
Q ss_pred HHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCe
Q 018446 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (355)
Q Consensus 163 F~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPV 242 (355)
...++++... ....+..+. . |-+.. -+...+++..++.|..- + |+.+-..+++.+..+|+. +++||
T Consensus 177 ~v~avR~~~g--~~~~l~vDa-----n-~~~~~-~~a~~~~~~l~~~~i~~---i-EqP~~~~~~~~~~~l~~~-~~iPi 242 (370)
T 1chr_A 177 HMEALSNSLG--SKAYLRVDV-----N-QAWDE-QVASVYIPELEALGVEL---I-EQPVGRENTQALRRLSDN-NRVAI 242 (370)
T ss_dssp HHHHHHHHSS--TTCCEEEEC-----T-TCCCT-THHHHHTHHHHTTTEEE---E-ECCSCTTCHHHHHHHHHH-SCSEE
T ss_pred HHHHHHHhcC--CCCEEEEEC-----C-CCCCH-HHHHHHHHHHHhcCCCE---E-ECCCCcccHHHHHHHHhh-CCCCE
Confidence 3455665431 224577664 1 22332 24556788888877443 4 444667889999999986 89999
Q ss_pred eccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHHHHHHHHHHHHcCCcEEE
Q 018446 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLDIRYMTKICKLLGLTALV 293 (355)
Q Consensus 243 LrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~L~~L~~~A~~LGLeaLV 293 (355)
..-+-+.+.+++.+....| +|.|.+=..-+ +-.+...+.++|+..|+.+.+
T Consensus 243 a~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~g~~~~~ 295 (370)
T 1chr_A 243 MADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYG 295 (370)
T ss_dssp EESSSCCSHHHHHHHHTTTSCSEEEECTTTSCSHHHHHHHHHHHHHHTCEEEE
T ss_pred EeCCCcCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCeEEe
Confidence 9999999999999988776 78877745444 456788899999999999764
No 250
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=82.34 E-value=2.7 Score=36.86 Aligned_cols=86 Identities=16% Similarity=0.163 Sum_probs=56.9
Q ss_pred CHHHHHHHHHHcCceEEEEecc--CCCCCC----CHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhc
Q 018446 198 DPVEIARSYEKGGAACLSILTD--EKYFKG----SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD--~~fF~G----S~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaai 271 (355)
++.+ ++.+.+.||+.|.+-+= ...|.| +++.++.+++. +++||+. +=.|++-.+.++..+|||+|.+.-++
T Consensus 119 t~~~-~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~-~~~pvia-~GGI~~~nv~~~~~~Ga~gv~vgs~i 195 (221)
T 1yad_A 119 SLEE-AVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQR-ISIPVIA-IGGMTPDRLRDVKQAGADGIAVMSGI 195 (221)
T ss_dssp SHHH-HHHHHHTTCSEEEEECCC----------CHHHHHHHHHHH-CCSCEEE-ESSCCGGGHHHHHHTTCSEEEESHHH
T ss_pred CHHH-HHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHh-CCCCEEE-ECCCCHHHHHHHHHcCCCEEEEhHHh
Confidence 4554 45566789999877431 111222 36778888775 6889765 45569999999999999999999888
Q ss_pred CCH----HHHHHHHHHHHH
Q 018446 272 LPD----LDIRYMTKICKL 286 (355)
Q Consensus 272 L~~----~~L~~L~~~A~~ 286 (355)
+.. +.++.|.+..++
T Consensus 196 ~~~~d~~~~~~~~~~~~~~ 214 (221)
T 1yad_A 196 FSSAEPLEAARRYSRKLKE 214 (221)
T ss_dssp HTSSSHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHH
Confidence 853 234445444443
No 251
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=82.33 E-value=3.7 Score=39.01 Aligned_cols=119 Identities=9% Similarity=0.027 Sum_probs=83.6
Q ss_pred HHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCe
Q 018446 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (355)
Q Consensus 163 F~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPV 242 (355)
...++++.. ....+..+. . |-+... + .++++..++.|..- +-|| +-..+++.+..+|+. +++||
T Consensus 172 ~v~avr~a~---~~~~l~vDa-----n-~~~~~~-~-~~~~~~l~~~~i~~---iEqP-~~~~d~~~~~~l~~~-~~ipI 235 (369)
T 2zc8_A 172 VLKAVREAF---PEATLTADA-----N-SAYSLA-N-LAQLKRLDELRLDY---IEQP-LAYDDLLDHAKLQRE-LSTPI 235 (369)
T ss_dssp HHHHHHHHC---TTSCEEEEC-----T-TCCCGG-G-HHHHHGGGGGCCSC---EECC-SCTTCSHHHHHHHHH-CSSCE
T ss_pred HHHHHHHHc---CCCeEEEec-----C-CCCCHH-H-HHHHHHHHhCCCcE---EECC-CCcccHHHHHHHHhh-CCCCE
Confidence 455666542 123466665 1 223322 3 67778777777543 3344 456789999999986 89999
Q ss_pred eccccccCHHHHHHHHHcC-CcchHH-HHhcCCHHHHHHHHHHHHHcCCcEEEEeCC
Q 018446 243 LCKEFIVDAWQIYYARTKG-ADAVLL-IAAVLPDLDIRYMTKICKLLGLTALVEVHD 297 (355)
Q Consensus 243 LrKDFIIdpyQI~eAr~~G-ADAVLL-IaaiL~~~~L~~L~~~A~~LGLeaLVEVH~ 297 (355)
..-+-+.+++++.+....| +|.|.+ +..+=+-.+...+.++|+..|+.+++--..
T Consensus 236 a~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~ 292 (369)
T 2zc8_A 236 CLDESLTGAEKARKAIELGAGRVFNVKPARLGGHGESLRVHALAESAGIPLWMGGML 292 (369)
T ss_dssp EESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECCCC
T ss_pred EEcCccCCHHHHHHHHHhCCCCEEEEchhhhCCHHHHHHHHHHHHHcCCcEEecCcc
Confidence 9999999999999998888 788877 443335557788999999999998664433
No 252
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=82.28 E-value=1.7 Score=41.90 Aligned_cols=93 Identities=15% Similarity=0.152 Sum_probs=72.7
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~ 276 (355)
..++++..++.|...| |+.+-..+++.+..+|+. +++||..-+-+.+++++.+....| +|.|.+=+.-. +-.+
T Consensus 231 a~~~~~~l~~~~i~~i----E~P~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite 305 (407)
T 2o56_A 231 AIQFGRMIEELGIFYY----EEPVMPLNPAQMKQVADK-VNIPLAAGERIYWRWGYRPFLENGSLSVIQPDICTCGGITE 305 (407)
T ss_dssp HHHHHHHHGGGCCSCE----ECSSCSSSHHHHHHHHHH-CCSCEEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHH
T ss_pred HHHHHHHHHhcCCCEE----eCCCChhhHHHHHHHHHh-CCCCEEeCCCcCCHHHHHHHHHcCCCCEEecCccccCCHHH
Confidence 3467777888776643 444566789999999986 899999999999999999998887 68877744444 3456
Q ss_pred HHHHHHHHHHcCCcEEEEeCCH
Q 018446 277 IRYMTKICKLLGLTALVEVHDE 298 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH~~ 298 (355)
...+.++|+..|+.+.+ |+.
T Consensus 306 ~~~i~~~A~~~g~~~~~--h~~ 325 (407)
T 2o56_A 306 VKKICDMAHVYDKTVQI--HVC 325 (407)
T ss_dssp HHHHHHHHHTTTCEECC--CCC
T ss_pred HHHHHHHHHHcCCeEee--cCC
Confidence 77889999999999766 654
No 253
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=82.28 E-value=5.3 Score=38.95 Aligned_cols=116 Identities=10% Similarity=0.083 Sum_probs=83.5
Q ss_pred HHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCe
Q 018446 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (355)
Q Consensus 163 F~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPV 242 (355)
...++++... ....+..+. . |-+... + .++++.+++.|..-| |+.+-.++++.+..+|+. +++||
T Consensus 194 ~v~avR~a~G--~~~~L~vDa-----N-~~w~~~-~-~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPI 258 (400)
T 3mwc_A 194 PLQETRRAVG--DHFPLWTDA-----N-SSFELD-Q-WETFKAMDAAKCLFH----EQPLHYEALLDLKELGER-IETPI 258 (400)
T ss_dssp HHHHHHHHHC--TTSCEEEEC-----T-TCCCGG-G-HHHHHHHGGGCCSCE----ESCSCTTCHHHHHHHHHH-SSSCE
T ss_pred HHHHHHHhcC--CCCEEEEeC-----C-CCCCHH-H-HHHHHHHHhcCCCEE----eCCCChhhHHHHHHHHhh-CCCCE
Confidence 4556666431 234567663 2 223322 3 678888888886554 455667899999999986 89999
Q ss_pred eccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHHHHHHHHHHHHcCCcEEE
Q 018446 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLDIRYMTKICKLLGLTALV 293 (355)
Q Consensus 243 LrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~L~~L~~~A~~LGLeaLV 293 (355)
..-+-+.+.+++.+....| +|.|.+=+.-. +-.+...+.++|+..|+.+.+
T Consensus 259 a~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~ 311 (400)
T 3mwc_A 259 CLDESLISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIKIYKIATDNGIKLWG 311 (400)
T ss_dssp EESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEE
T ss_pred EEeCCcCCHHHHHHHHhcCCCCEEEEcchhhCCHHHHHHHHHHHHHcCCEEEe
Confidence 9999999999999988877 67777633333 456778899999999998754
No 254
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=82.19 E-value=1.9 Score=41.41 Aligned_cols=126 Identities=18% Similarity=0.136 Sum_probs=81.9
Q ss_pred CCceEEeEeeecCCC---CC---CCCCC-CCHHHHHHHHHHcCceEEEEecc---CCCCCCCHH----HHHHHHhcCCCC
Q 018446 175 GLPALIAEVKKASPS---RG---ILRED-FDPVEIARSYEKGGAACLSILTD---EKYFKGSFE----NLEAVRSAGVKC 240 (355)
Q Consensus 175 g~~aVIAEvKRaSPS---kG---~I~~~-~Dp~~iA~~Ye~~GAaaISVLTD---~~fF~GS~e----dL~~VR~a~v~l 240 (355)
+++.|+.||--.+|- .| .+... -++.+.|+.+.+.||+.|-|-.+ |..+.=|.+ -++.+++. +++
T Consensus 45 ~~p~i~m~I~n~tpdsf~d~i~~~~~~~~~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~-~~v 123 (310)
T 2h9a_B 45 NPPRFALEVFDTPPTDWPDILVEPFKDVINDPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADA-IDV 123 (310)
T ss_dssp SCCEEEEEEESSCCSSCCHHHHGGGTTTTTCHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHH-CSS
T ss_pred CCCeEEEEEeeCCCcccchhhhhhhccHHHHHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHh-CCc
Confidence 456789999999993 34 23222 37899999999999999999864 554444443 45556664 688
Q ss_pred Ceeccccc---cCHHHHHHHHHcCCc--chHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHH
Q 018446 241 PLLCKEFI---VDAWQIYYARTKGAD--AVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH-DEREMDRV 304 (355)
Q Consensus 241 PVLrKDFI---IdpyQI~eAr~~GAD--AVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH-~~eELerA 304 (355)
||---|-. -++-=+.+|..+||| +++-=+..+ ....+...|.++|.-.++--. |.+.+++.
T Consensus 124 plsI~DT~~~~~~~~V~eaal~aga~~k~iINdvs~~---~~~~~~~~aa~~g~~vv~m~~~dv~~l~~~ 190 (310)
T 2h9a_B 124 PLMIIGCGVEEKDAEIFPVIGEALSGRNCLLSSATKD---NYKPIVATCMVHGHSVVASAPLDINLSKQL 190 (310)
T ss_dssp CEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEECTT---THHHHHHHHHHHTCEEEEECSSCHHHHHHH
T ss_pred eEEEECCCCCCCCHHHHHHHHHhCCCCCCEEEECCCC---ccHHHHHHHHHhCCCEEEEChhHHHHHHHH
Confidence 87321211 234446667779998 444333333 457889999999987777433 45555543
No 255
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=82.18 E-value=5.8 Score=37.86 Aligned_cols=136 Identities=13% Similarity=0.142 Sum_probs=82.7
Q ss_pred CHHHHHHHHHHcCceEEEEe-------ccCCC---CCCCHHHHHHHHhcCCCCCeecc---ccccCHHHHHHHHHcCCcc
Q 018446 198 DPVEIARSYEKGGAACLSIL-------TDEKY---FKGSFENLEAVRSAGVKCPLLCK---EFIVDAWQIYYARTKGADA 264 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVL-------TD~~f---F~GS~edL~~VR~a~v~lPVLrK---DFIIdpyQI~eAr~~GADA 264 (355)
+-.++++.+.+.|+..|=|= +++.| -.+.++.++.+++...+.|+..- -.. ..--|..|..+|+|.
T Consensus 31 ~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~-~~~~i~~a~~aGvd~ 109 (345)
T 1nvm_A 31 DVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLPGIG-SVHDLKNAYQAGARV 109 (345)
T ss_dssp HHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEEEEEECBTTB-CHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEEEEEecCCcc-cHHHHHHHHhCCcCE
Confidence 34577888888888888762 23322 12456777777764234443221 111 244577888899998
Q ss_pred hHHHHhcCCHHHHHHHHHHHHHcCCcEEEEe-----CCHHHHHH----HhccCCCeEEEeeCCCCCccccChhhHHhhhc
Q 018446 265 VLLIAAVLPDLDIRYMTKICKLLGLTALVEV-----HDEREMDR----VLGIEGIELIGINNRNLETFEVDNSNTKKLLE 335 (355)
Q Consensus 265 VLLIaaiL~~~~L~~L~~~A~~LGLeaLVEV-----H~~eELer----Al~l~ga~iIGINNRdL~TfevDl~~t~~L~~ 335 (355)
|.+-..+=.-+.....+++|++.|+++.+=+ .+.+.+.+ +.+. |+..|.+..-. . -..++...+++.
T Consensus 110 v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~-Ga~~i~l~DT~--G-~~~P~~v~~lv~ 185 (345)
T 1nvm_A 110 VRVATHCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESY-GATCIYMADSG--G-AMSMNDIRDRMR 185 (345)
T ss_dssp EEEEEETTCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHH-TCSEEEEECTT--C-CCCHHHHHHHHH
T ss_pred EEEEEeccHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHC-CCCEEEECCCc--C-ccCHHHHHHHHH
Confidence 7664333223578889999999999988777 34444443 3333 78888776431 1 123677777666
Q ss_pred ccc
Q 018446 336 GER 338 (355)
Q Consensus 336 ~~~ 338 (355)
.++
T Consensus 186 ~l~ 188 (345)
T 1nvm_A 186 AFK 188 (345)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 256
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=82.16 E-value=2 Score=41.44 Aligned_cols=72 Identities=17% Similarity=0.108 Sum_probs=50.2
Q ss_pred HHHHHHHHcCceEEEEeccCCCC----------CCCHHHHHHHHhc--CCCCCeeccccccCHHHHHHHHHcCCcchHHH
Q 018446 201 EIARSYEKGGAACLSILTDEKYF----------KGSFENLEAVRSA--GVKCPLLCKEFIVDAWQIYYARTKGADAVLLI 268 (355)
Q Consensus 201 ~iA~~Ye~~GAaaISVLTD~~fF----------~GS~edL~~VR~a--~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLI 268 (355)
+.|+...++||++|.|-.-+.++ ...+.-|..++++ ..++||+.-==|-++-+|..|.++|||+|.+=
T Consensus 173 e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlalGA~~V~vG 252 (351)
T 2c6q_A 173 EMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLG 252 (351)
T ss_dssp HHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHcCCCceecc
Confidence 57888889999999883222111 1123344444332 15799999888999999999999999999664
Q ss_pred HhcC
Q 018446 269 AAVL 272 (355)
Q Consensus 269 aaiL 272 (355)
-.+|
T Consensus 253 ~~fl 256 (351)
T 2c6q_A 253 GMLA 256 (351)
T ss_dssp TTTT
T ss_pred HHHh
Confidence 4444
No 257
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=82.07 E-value=7.5 Score=37.23 Aligned_cols=114 Identities=18% Similarity=0.158 Sum_probs=71.1
Q ss_pred HHHHHHHHHcCceEEEEeccC-------CCCCCCH--------HHHHHHHhcCCCCCeeccc-cccC-------HHH-HH
Q 018446 200 VEIARSYEKGGAACLSILTDE-------KYFKGSF--------ENLEAVRSAGVKCPLLCKE-FIVD-------AWQ-IY 255 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~-------~fF~GS~--------edL~~VR~a~v~lPVLrKD-FIId-------pyQ-I~ 255 (355)
.+.|+..+++|+++|-+..-- .-|+|++ +-+..+|++ +++||..|= ...+ ..+ +.
T Consensus 73 ~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~-v~~PV~vKiR~g~~~~~~~~~~~~~a~ 151 (350)
T 3b0p_A 73 AEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEA-VRVPVTVKMRLGLEGKETYRGLAQSVE 151 (350)
T ss_dssp HHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHH-CSSCEEEEEESCBTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHH-hCCceEEEEecCcCccccHHHHHHHHH
Confidence 445555667899999887421 2366664 455677775 789998852 2222 122 23
Q ss_pred HHHHcCCcchHHHHhc----CCH--------HHHHHHHHHHHHc-CCcEEE--EeCCHHHHHHHhccCCCeEEEee
Q 018446 256 YARTKGADAVLLIAAV----LPD--------LDIRYMTKICKLL-GLTALV--EVHDEREMDRVLGIEGIELIGIN 316 (355)
Q Consensus 256 eAr~~GADAVLLIaai----L~~--------~~L~~L~~~A~~L-GLeaLV--EVH~~eELerAl~l~ga~iIGIN 316 (355)
.+..+|+|+|.+-... ++. .++..+.++.... ++-.+. -|.|.+++++++. |++.|+|-
T Consensus 152 ~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~--GaD~V~iG 225 (350)
T 3b0p_A 152 AMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK--RVDGVMLG 225 (350)
T ss_dssp HHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT--TSSEEEEC
T ss_pred HHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh--CCCEEEEC
Confidence 5567899999875432 221 1344444555666 665554 3689999999996 79988875
No 258
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=81.87 E-value=2.9 Score=40.61 Aligned_cols=93 Identities=10% Similarity=0.029 Sum_probs=75.3
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcCC-HHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL~-~~~ 276 (355)
...+++.+++.|...| |+.+-.++++.+..+|+. +++||..-+-+.++++..+....| +|.|.+=+.-.+ -.+
T Consensus 222 A~~~~~~L~~~~i~~i----EeP~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~ 296 (394)
T 3mkc_A 222 VARLLNSIEDLELYFA----EATLQHDDLSGHAKLVEN-TRSRICGAEMSTTRFEAEEWITKGKVHLLQSDYNRCGGLTE 296 (394)
T ss_dssp HHHHHHHTGGGCCSEE----ESCSCTTCHHHHHHHHHH-CSSCBEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHH
T ss_pred HHHHHHHhhhcCCeEE----ECCCCchhHHHHHHHHhh-CCCCEEeCCCCCCHHHHHHHHHcCCCCeEecCccccCCHHH
Confidence 4567888888886655 555667899999999986 899999999999999999998876 788777555554 456
Q ss_pred HHHHHHHHHHcCCcEEEEeCCH
Q 018446 277 IRYMTKICKLLGLTALVEVHDE 298 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH~~ 298 (355)
...+..+|+..|+.+. +|+.
T Consensus 297 ~~~ia~~A~~~gi~~~--~h~~ 316 (394)
T 3mkc_A 297 LRRITEMATANNVQVM--PHNW 316 (394)
T ss_dssp HHHHHHHHHHTTCEEC--CCCC
T ss_pred HHHHHHHHHHcCCEEe--ecCC
Confidence 7788999999999975 6875
No 259
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=81.80 E-value=3.2 Score=40.35 Aligned_cols=93 Identities=13% Similarity=0.103 Sum_probs=72.9
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~ 276 (355)
...+++.+++.|...| |+.+-..+++.+..+|+. +++||..-+-+.++++..+....| +|.|.+=+.-. +-.+
T Consensus 217 A~~~~~~L~~~~i~~i----EqP~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~ 291 (401)
T 3sbf_A 217 AIQFAKEVEQYKPYFI----EDILPPNQTEWLDNIRSQ-SSVSLGLGELFNNPEEWKSLIANRRIDFIRCHVSQIGGITP 291 (401)
T ss_dssp HHHHHHHHGGGCCSCE----ECSSCTTCGGGHHHHHTT-CCCCEEECTTCCSHHHHHHHHHTTCCSEECCCGGGGTSHHH
T ss_pred HHHHHHHHHhcCCCEE----ECCCChhHHHHHHHHHhh-CCCCEEeCCccCCHHHHHHHHhcCCCCEEecCccccCCHHH
Confidence 3467788888886554 445566789999999985 899999999999999999998877 78877744444 4567
Q ss_pred HHHHHHHHHHcCCcEEEEeCCH
Q 018446 277 IRYMTKICKLLGLTALVEVHDE 298 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH~~ 298 (355)
...+..+|+..|+.+. +|+.
T Consensus 292 ~~kia~~A~~~gi~~~--~h~~ 311 (401)
T 3sbf_A 292 ALKLGHLCQNFGVRIA--WHCA 311 (401)
T ss_dssp HHHHHHHHHHHTCEEC--CCCC
T ss_pred HHHHHHHHHHcCCEEE--ecCC
Confidence 7889999999999854 6655
No 260
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=81.78 E-value=3.6 Score=39.65 Aligned_cols=90 Identities=14% Similarity=0.152 Sum_probs=70.0
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~ 276 (355)
..++++..++.|. . +-|| +- +++.+..+|+. +++||..-+-+.++.+..+....| +|.|.+=..-+ +-..
T Consensus 205 a~~~~~~l~~~~i-~---iEqP-~~--~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik~~~~GGit~ 276 (378)
T 3eez_A 205 ALRVMRATEDLHV-M---FEQP-GE--TLDDIAAIRPL-HSAPVSVDECLVTLQDAARVARDGLAEVFGIKLNRVGGLTR 276 (378)
T ss_dssp HHHHHHHTGGGTC-C---EECC-SS--SHHHHHHTGGG-CCCCEEECTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHH
T ss_pred HHHHHHHhccCCe-E---EecC-CC--CHHHHHHHHhh-CCCCEEECCCCCCHHHHHHHHHcCCCCEEEeCchhcCCHHH
Confidence 3456777777774 3 3344 33 89999999986 899999999999999999988877 68887744443 4567
Q ss_pred HHHHHHHHHHcCCcEEEEeC
Q 018446 277 IRYMTKICKLLGLTALVEVH 296 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH 296 (355)
...+.++|+..|+.+.+-..
T Consensus 277 ~~~ia~~A~~~g~~~~~~~~ 296 (378)
T 3eez_A 277 AARMRDIALTHGIDMFVMAT 296 (378)
T ss_dssp HHHHHHHHHHTTCEEEEECS
T ss_pred HHHHHHHHHHcCCEEEcCCC
Confidence 78899999999999887643
No 261
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=81.65 E-value=5.2 Score=40.15 Aligned_cols=80 Identities=8% Similarity=0.156 Sum_probs=52.2
Q ss_pred CCCC-eecc---cccc-CHHHH-HHHHHcCCcchHHHHhcCCH--------------------HHHHHHHHHHHHc--CC
Q 018446 238 VKCP-LLCK---EFIV-DAWQI-YYARTKGADAVLLIAAVLPD--------------------LDIRYMTKICKLL--GL 289 (355)
Q Consensus 238 v~lP-VLrK---DFII-dpyQI-~eAr~~GADAVLLIaaiL~~--------------------~~L~~L~~~A~~L--GL 289 (355)
+++| |+.| |+-. +-.+| ..+..+|||+|.++-..... ..+..+.++.+.+ .+
T Consensus 295 ~~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~i 374 (443)
T 1tv5_A 295 KKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQI 374 (443)
T ss_dssp SSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCS
T ss_pred CCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCC
Confidence 4689 8777 3211 11223 34467899999887764421 1244455666666 55
Q ss_pred cEEE--EeCCHHHHHHHhccCCCeEEEeeCC
Q 018446 290 TALV--EVHDEREMDRVLGIEGIELIGINNR 318 (355)
Q Consensus 290 eaLV--EVH~~eELerAl~l~ga~iIGINNR 318 (355)
..+. -|+|.+++.+++.+ ||++|+|---
T Consensus 375 PVIg~GGI~s~~DA~e~l~a-GAd~Vqigra 404 (443)
T 1tv5_A 375 PIIASGGIFSGLDALEKIEA-GASVCQLYSC 404 (443)
T ss_dssp CEEEESSCCSHHHHHHHHHT-TEEEEEESHH
T ss_pred cEEEECCCCCHHHHHHHHHc-CCCEEEEcHH
Confidence 5554 68999999999996 9999998644
No 262
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=81.52 E-value=4.8 Score=38.99 Aligned_cols=89 Identities=10% Similarity=0.073 Sum_probs=68.3
Q ss_pred HHHHHHHHHHcCc--eEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CH
Q 018446 199 PVEIARSYEKGGA--ACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PD 274 (355)
Q Consensus 199 p~~iA~~Ye~~GA--aaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~ 274 (355)
...+++..++.|. .-| |+.+-.++++.+..+|+. +++|| -+-+.+++++.+....| +|.|.+=..-+ +-
T Consensus 203 A~~~~~~l~~~~i~~~~i----EqP~~~~d~~~~~~l~~~-~~iPI--dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGi 275 (391)
T 3gd6_A 203 AHRAIKRLTKYDLGLEMI----ESPAPRNDFDGLYQLRLK-TDYPI--SEHVWSFKQQQEMIKKDAIDIFNISPVFIGGL 275 (391)
T ss_dssp HHHHHHHHTTCCSSCCEE----ECCSCTTCHHHHHHHHHH-CSSCE--EEECCCHHHHHHHHHHTCCSEEEECHHHHTSH
T ss_pred HHHHHHHHHhcCCCccee----cCCCChhhHHHHHHHHHH-cCCCc--CCCCCCHHHHHHHHHcCCCCEEEECchhcCCH
Confidence 3456788888775 433 344667899999999986 89999 77888999998888776 68887744444 45
Q ss_pred HHHHHHHHHHHHcCCcEEEE
Q 018446 275 LDIRYMTKICKLLGLTALVE 294 (355)
Q Consensus 275 ~~L~~L~~~A~~LGLeaLVE 294 (355)
.+...+.++|+..|+.+.+-
T Consensus 276 t~~~~ia~~A~~~gi~~~~~ 295 (391)
T 3gd6_A 276 TSAKKAAYAAEVASKDVVLG 295 (391)
T ss_dssp HHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHcCCEEEec
Confidence 67788999999999997653
No 263
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=81.28 E-value=2.3 Score=40.96 Aligned_cols=89 Identities=13% Similarity=0.098 Sum_probs=68.0
Q ss_pred HHHHHHHHc-CceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHHH
Q 018446 201 EIARSYEKG-GAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLDI 277 (355)
Q Consensus 201 ~iA~~Ye~~-GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~L 277 (355)
++++..++. |... + |+.+-..+++.+..+|+. +++||..-+-+.++.++.+....| +|.|.+=+.-. +-.+.
T Consensus 202 ~~~~~l~~~~~i~~---i-EqP~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~ 276 (382)
T 2gdq_A 202 KWERYFSEWTNIGW---L-EEPLPFDQPQDYAMLRSR-LSVPVAGGENMKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEF 276 (382)
T ss_dssp TTHHHHTTCSCEEE---E-ECCSCSSCHHHHHHHHTT-CSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHH
T ss_pred HHHHHHhhccCCeE---E-ECCCCcccHHHHHHHHhh-CCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHH
Confidence 456666666 6443 3 445666789999999985 899999999999999999988877 78777744444 34566
Q ss_pred HHHHHHHHHcCCcEEEE
Q 018446 278 RYMTKICKLLGLTALVE 294 (355)
Q Consensus 278 ~~L~~~A~~LGLeaLVE 294 (355)
..+.++|+..|+.+.+-
T Consensus 277 ~~i~~~A~~~g~~~~~~ 293 (382)
T 2gdq_A 277 RDCLQLARYFGVRASAH 293 (382)
T ss_dssp HHHHHHHHHHTCEECCC
T ss_pred HHHHHHHHHcCCEEeec
Confidence 78899999999986654
No 264
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=81.20 E-value=1.5 Score=41.85 Aligned_cols=116 Identities=11% Similarity=0.156 Sum_probs=84.4
Q ss_pred HHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCH---HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCC
Q 018446 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDP---VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVK 239 (355)
Q Consensus 163 F~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp---~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~ 239 (355)
...++++... ....+..+. +..+++ ..+++..++.|...| |+.+-.++++.+..+|+. ++
T Consensus 173 ~v~avR~~~g--~~~~l~vDa----------n~~~~~~~a~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~ 235 (356)
T 3ro6_B 173 RLRRLHETLA--GRAVVRVDP----------NQSYDRDGLLRLDRLVQELGIEFI----EQPFPAGRTDWLRALPKA-IR 235 (356)
T ss_dssp HHHHHHHHHT--TSSEEEEEC----------TTCCCHHHHHHHHHHHHHTTCCCE----ECCSCTTCHHHHHTSCHH-HH
T ss_pred HHHHHHHHhC--CCCEEEEeC----------CCCCCHHHHHHHHHHHHhcCCCEE----ECCCCCCcHHHHHHHHhc-CC
Confidence 3445555431 234566664 223444 457788888886655 455667899999999875 78
Q ss_pred CCeeccccccCHHHHHHHHHcC--CcchHHHHhcC-CHHHHHHHHHHHHHcCCcEEEEe
Q 018446 240 CPLLCKEFIVDAWQIYYARTKG--ADAVLLIAAVL-PDLDIRYMTKICKLLGLTALVEV 295 (355)
Q Consensus 240 lPVLrKDFIIdpyQI~eAr~~G--ADAVLLIaaiL-~~~~L~~L~~~A~~LGLeaLVEV 295 (355)
+||..-+-+.+++++.+....| +|.|.+=..-+ +-.+...+.++|+..|+.+.+-.
T Consensus 236 iPIa~dE~~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~ 294 (356)
T 3ro6_B 236 RRIAADESLLGPADAFALAAPPAACGIFNIKLMKCGGLAPARRIATIAETAGIDLMWGC 294 (356)
T ss_dssp HTEEESTTCCSHHHHHHHHSSSCSCSEEEECHHHHCSHHHHHHHHHHHHHHTCEEEECC
T ss_pred CCEEeCCcCCCHHHHHHHHhcCCcCCEEEEcccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 9999999999999999988875 88888744433 55677889999999999987643
No 265
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=80.81 E-value=3.8 Score=39.59 Aligned_cols=87 Identities=13% Similarity=0.027 Sum_probs=68.9
Q ss_pred HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhc----CCCCCeeccccccCHHHHHHHHHcC-CcchHH-HHhcCC
Q 018446 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSA----GVKCPLLCKEFIVDAWQIYYARTKG-ADAVLL-IAAVLP 273 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a----~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLL-IaaiL~ 273 (355)
.++++..++.|.. .+-|| +- .+++.+..+|+. ++++||..-+ +.++.++.+....| +|.|.+ +..+ +
T Consensus 218 i~~~~~l~~~~i~---~iE~P-~~-~d~~~~~~l~~~l~~~g~~iPIa~dE-~~~~~~~~~~i~~~~~d~v~ik~~~~-G 290 (392)
T 3p3b_A 218 KEVLAALSDVNLY---WLEEA-FH-EDEALYEDLKEWLGQRGQNVLIADGE-GLASPHLIEWATRGRVDVLQYDIIWP-G 290 (392)
T ss_dssp HHHHHHTTTSCEE---EEECS-SS-CCHHHHHHHHHHHHHHTCCCEEEECC-SSCCTTHHHHHHTTSCCEECCBTTTB-C
T ss_pred HHHHHHHHhcCCC---EEecC-Cc-ccHHHHHHHHHhhccCCCCccEEecC-CCCHHHHHHHHHcCCCCEEEeCcccc-C
Confidence 3456666665543 33444 44 889999999874 2789999999 99999999998888 788888 6667 8
Q ss_pred HHHHHHHHHHHHHcCCcEEE
Q 018446 274 DLDIRYMTKICKLLGLTALV 293 (355)
Q Consensus 274 ~~~L~~L~~~A~~LGLeaLV 293 (355)
-.+...+.++|+..|+.+.+
T Consensus 291 it~~~~i~~~A~~~gi~~~~ 310 (392)
T 3p3b_A 291 FTHWMELGEKLDAHGLRSAP 310 (392)
T ss_dssp HHHHHHHHHHHHHTTCEECC
T ss_pred HHHHHHHHHHHHHcCCEEEe
Confidence 88888999999999999776
No 266
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=80.67 E-value=4.6 Score=39.93 Aligned_cols=92 Identities=11% Similarity=0.102 Sum_probs=72.9
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~ 276 (355)
...+++..++.|...| |+..-..+++.+..+|+. +++||..-+-+.++++..+....| +|.|.+=+.-. +-.+
T Consensus 219 A~~~~~~Le~~~i~~i----EeP~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~g~~D~v~~d~~~~GGit~ 293 (433)
T 3rcy_A 219 AIRLGQAIEPYSPLWY----EEPVPPDNVGAMAQVARA-VRIPVATGERLTTKAEFAPVLREGAAAILQPALGRAGGIWE 293 (433)
T ss_dssp HHHHHHHHGGGCCSEE----ECCSCTTCHHHHHHHHHH-SSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTHHHH
T ss_pred HHHHHHHhhhcCCCEE----ECCCChhhHHHHHHHHhc-cCCCEEecCCCCCHHHHHHHHHcCCCCEEEeCchhcCCHHH
Confidence 3457788888886655 445566799999999986 899999999999999999998887 78887744444 3456
Q ss_pred HHHHHHHHHHcCCcEEEEeCC
Q 018446 277 IRYMTKICKLLGLTALVEVHD 297 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH~ 297 (355)
...+..+|+..|+.+. +|+
T Consensus 294 ~~kia~lA~~~gv~~~--~h~ 312 (433)
T 3rcy_A 294 MKKVAAMAEVYNAQMA--PHL 312 (433)
T ss_dssp HHHHHHHHHTTTCEEC--CCC
T ss_pred HHHHHHHHHHcCCEEE--ecC
Confidence 7788999999999854 676
No 267
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=80.57 E-value=4.8 Score=39.43 Aligned_cols=93 Identities=16% Similarity=0.167 Sum_probs=73.4
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~ 276 (355)
...+++.+++.|...| |+.+-.++++.+..+|+. +++||..-+-+.++++..+....| +|.|.+=+.-. +-.+
T Consensus 217 A~~~~~~L~~~~i~~i----EeP~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGit~ 291 (412)
T 4e4u_A 217 AIRLAKRLEKYDPLWF----EEPVPPGQEEAIAQVAKH-TSIPIATGERLTTKYEFHKLLQAGGASILQLNVARVGGLLE 291 (412)
T ss_dssp HHHHHHHHGGGCCSEE----ECCSCSSCHHHHHHHHHT-CSSCEEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTSHHH
T ss_pred HHHHHHHhhhcCCcEE----ECCCChhhHHHHHHHHhh-CCCCEEecCccCCHHHHHHHHHcCCCCEEEeCccccCCHHH
Confidence 3457788888886554 444667899999999985 899999999999999999998887 68877744444 4567
Q ss_pred HHHHHHHHHHcCCcEEEEeCCH
Q 018446 277 IRYMTKICKLLGLTALVEVHDE 298 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH~~ 298 (355)
...+..+|+..|+.+ -+|..
T Consensus 292 ~~kia~~A~~~gi~v--~~h~~ 311 (412)
T 4e4u_A 292 AKKIATLAEVHYAQI--APHLY 311 (412)
T ss_dssp HHHHHHHHHHTTCEE--CCCCC
T ss_pred HHHHHHHHHHcCCEE--EecCC
Confidence 788999999999985 55763
No 268
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=80.50 E-value=3.3 Score=38.39 Aligned_cols=131 Identities=12% Similarity=0.072 Sum_probs=76.2
Q ss_pred HHHHHHHHHHcCceEEEEec--cCCCCC---CCHHHHHHHHhcCCCCC--eeccccccCHHHHHHHHHcCCcchHHHHhc
Q 018446 199 PVEIARSYEKGGAACLSILT--DEKYFK---GSFENLEAVRSAGVKCP--LLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLT--D~~fF~---GS~edL~~VR~a~v~lP--VLrKDFIIdpyQI~eAr~~GADAVLLIaai 271 (355)
-..+++...+.|...|=+-+ .++|+. +.++.++.+++. .++| +|. -..-.|..|..+|+|.|-+-.+.
T Consensus 28 k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~-~~~~v~~l~----~n~~~i~~a~~~G~~~V~i~~~~ 102 (295)
T 1ydn_A 28 KIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRA-DGVRYSVLV----PNMKGYEAAAAAHADEIAVFISA 102 (295)
T ss_dssp HHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-SSSEEEEEC----SSHHHHHHHHHTTCSEEEEEEES
T ss_pred HHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhC-CCCEEEEEe----CCHHHHHHHHHCCCCEEEEEEec
Confidence 34567777777777666543 233333 234444444332 2333 333 34556677778888876553211
Q ss_pred ----------CCH----HHHHHHHHHHHHcCCcEEEE-----------eCCHHHHHHHh----ccCCCeEEEeeCCCCCc
Q 018446 272 ----------LPD----LDIRYMTKICKLLGLTALVE-----------VHDEREMDRVL----GIEGIELIGINNRNLET 322 (355)
Q Consensus 272 ----------L~~----~~L~~L~~~A~~LGLeaLVE-----------VH~~eELerAl----~l~ga~iIGINNRdL~T 322 (355)
.+. +.+.+.+++|++.|+.+-.+ -+|.+++.+.. ++ |++.|.|-+ -..
T Consensus 103 S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~-G~d~i~l~D--t~G 179 (295)
T 1ydn_A 103 SEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSL-GCHEVSLGD--TIG 179 (295)
T ss_dssp CHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHH-TCSEEEEEE--TTS
T ss_pred CHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhc-CCCEEEecC--CCC
Confidence 121 34566789999999997533 35778777655 44 899998883 111
Q ss_pred cccChhhHHhhhcccc
Q 018446 323 FEVDNSNTKKLLEGER 338 (355)
Q Consensus 323 fevDl~~t~~L~~~~~ 338 (355)
. ..+....+++..++
T Consensus 180 ~-~~P~~~~~lv~~l~ 194 (295)
T 1ydn_A 180 R-GTPDTVAAMLDAVL 194 (295)
T ss_dssp C-CCHHHHHHHHHHHH
T ss_pred C-cCHHHHHHHHHHHH
Confidence 1 45677777666543
No 269
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=80.44 E-value=3.1 Score=36.22 Aligned_cols=112 Identities=19% Similarity=0.172 Sum_probs=64.7
Q ss_pred CCCHHHHHHHHHHcCceEEEEeccC-CCCCCCHHHHHHHHhcCCCCCeeccccc-cCHHHHHHHHHcCCcchHHHHhcCC
Q 018446 196 DFDPVEIARSYEKGGAACLSILTDE-KYFKGSFENLEAVRSAGVKCPLLCKEFI-VDAWQIYYARTKGADAVLLIAAVLP 273 (355)
Q Consensus 196 ~~Dp~~iA~~Ye~~GAaaISVLTD~-~fF~GS~edL~~VR~a~v~lPVLrKDFI-IdpyQI~eAr~~GADAVLLIaaiL~ 273 (355)
+.++.++.+...+.|-.+.|+-+-. .|+.|... + ..-|-.++..+ .-...|..|..+||..|.+.....+
T Consensus 39 ~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~g~~~-~-------~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~ 110 (260)
T 1k77_A 39 NYSTLQIQKQLEQNHLTLALFNTAPGDINAGEWG-L-------SALPGREHEAHADIDLALEYALALNCEQVHVMAGVVP 110 (260)
T ss_dssp TSCHHHHHHHHHHTTCEEEEEECCCCCGGGTCSC-S-------TTCTTCHHHHHHHHHHHHHHHHHTTCSEEECCCCBCC
T ss_pred CCCHHHHHHHHHHcCCceEEEecCCcccccccCC-C-------CCChhHHHHHHHHHHHHHHHHHHcCCCEEEECcCCCC
Confidence 4578899999999999988876632 23222100 0 00000000000 0123456677788877765443322
Q ss_pred ------------HHHHHHHHHHHHHcCCcEEEEeCC-----------HHHHHHHhccCCCeEEEe
Q 018446 274 ------------DLDIRYMTKICKLLGLTALVEVHD-----------EREMDRVLGIEGIELIGI 315 (355)
Q Consensus 274 ------------~~~L~~L~~~A~~LGLeaLVEVH~-----------~eELerAl~l~ga~iIGI 315 (355)
-+.|.++.++|.+.|+...+|-|+ .+++.+.++.-+.+-+|+
T Consensus 111 ~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~ 175 (260)
T 1k77_A 111 AGEDAERYRAVFIDNIRYAADRFAPHGKRILVEALSPGVKPHYLFSSQYQALAIVEEVARDNVFI 175 (260)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECCCCTTTSTTBSCCSHHHHHHHHHHHCCTTEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCCccCCCcCccCCHHHHHHHHHHhCCCCEEE
Confidence 235677888999999999999983 456666654323334555
No 270
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=80.41 E-value=2.7 Score=37.86 Aligned_cols=112 Identities=17% Similarity=0.167 Sum_probs=64.0
Q ss_pred HHHHHHcCceEEEEeccCC-CCCCC----HHHHHHHHhcCCCCCeeccc----cccCHHHHH----HHHHcCCcchHHHH
Q 018446 203 ARSYEKGGAACLSILTDEK-YFKGS----FENLEAVRSAGVKCPLLCKE----FIVDAWQIY----YARTKGADAVLLIA 269 (355)
Q Consensus 203 A~~Ye~~GAaaISVLTD~~-fF~GS----~edL~~VR~a~v~lPVLrKD----FIIdpyQI~----eAr~~GADAVLLIa 269 (355)
++.-.+.||++|.+.-.-. .-.|. .+++..+|++ +. |++.|= -.+++-++. .+..+|||+|..-.
T Consensus 76 ~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a-~~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~tst 153 (225)
T 1mzh_A 76 AVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRE-TP-SAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKTST 153 (225)
T ss_dssp HHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHT-CT-TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCC
T ss_pred HHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHH-hc-CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEECC
Confidence 3455578999999533211 11233 3577888886 66 776553 113443332 34556999993222
Q ss_pred hc----CCHHHHHHHHHHHH-HcCCcEEEEeCCHHHHHHHhccCCCeEEEeeC
Q 018446 270 AV----LPDLDIRYMTKICK-LLGLTALVEVHDEREMDRVLGIEGIELIGINN 317 (355)
Q Consensus 270 ai----L~~~~L~~L~~~A~-~LGLeaLVEVH~~eELerAl~l~ga~iIGINN 317 (355)
.. .+.+.++.+.+... .+++-+-=-++|.+++.+.+.+ ||+.||+-.
T Consensus 154 g~~~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~a-GA~~iG~s~ 205 (225)
T 1mzh_A 154 GFAPRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEA-GADRIGTSS 205 (225)
T ss_dssp SCSSSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHT-TCSEEEESC
T ss_pred CCCCCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHh-CchHHHHcc
Confidence 11 12234444433221 2233333347999999999996 999999863
No 271
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=80.24 E-value=4.7 Score=39.19 Aligned_cols=125 Identities=17% Similarity=0.161 Sum_probs=88.1
Q ss_pred HHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCH---HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCC
Q 018446 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDP---VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVK 239 (355)
Q Consensus 163 F~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp---~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~ 239 (355)
...++++... ....+..+. +..+++ ..+++..++.|...| |+.+-.++++.+..+|+. ++
T Consensus 208 ~v~avR~a~G--~~~~l~vDa----------N~~~~~~~A~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~ 270 (390)
T 3ugv_A 208 TAEAVWDAVG--RDTALMVDF----------NQGLDMAEAMHRTRQIDDLGLEWI----EEPVVYDNFDGYAQLRHD-LK 270 (390)
T ss_dssp HHHHHHHHHC--TTSEEEEEC----------TTCCCHHHHHHHHHHHTTSCCSEE----ECCSCTTCHHHHHHHHHH-CS
T ss_pred HHHHHHHHhC--CCCEEEEEC----------CCCCCHHHHHHHHHHHHhhCCCEE----ECCCCcccHHHHHHHHHh-cC
Confidence 3445655431 234577664 233444 456777877776554 455667899999999986 89
Q ss_pred CCeeccccccCHHHHHHHHHcC-CcchHHHHhcCC-HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhc
Q 018446 240 CPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVEVHDEREMDRVLG 306 (355)
Q Consensus 240 lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL~-~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~ 306 (355)
+||..-+-+.+++++.+....| +|.|.+=+.-++ -.+...+..+|+..|+.+. +|+.-|.-..+.
T Consensus 271 iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~--~h~~~~a~lhl~ 337 (390)
T 3ugv_A 271 TPLMIGENFYGPREMHQALQAGACDLVMPDFMRIGGVSGWMRAAGVAGAWGIPMS--THLYPEVGAHVM 337 (390)
T ss_dssp SCEEECTTCCSHHHHHHHHHTTCCSEECCBHHHHTHHHHHHHHHHHHHHHTCCBC--CBSCHHHHHHHH
T ss_pred CCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEe--ecCHHHHHHHHH
Confidence 9999999999999999998877 687776444443 4567788999999999965 677766554443
No 272
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=80.22 E-value=5.9 Score=38.21 Aligned_cols=90 Identities=11% Similarity=0.106 Sum_probs=70.2
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHH-hcCCHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIA-AVLPDLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIa-aiL~~~~ 276 (355)
...+++..++.|..-| |+.+-.++++.+..+|+. +++||..-+-+.+.+++.+....| +|.|.+=+ .+=+-.+
T Consensus 210 A~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~ 284 (382)
T 3dgb_A 210 ALRACRILGGNGIDLI----EQPISRNNRAGMVRLNAS-SPAPIMADESIECVEDAFNLAREGAASVFALKIAKNGGPRA 284 (382)
T ss_dssp HHHHHHHHHTTTCCCE----ECCBCTTCHHHHHHHHHH-CSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHHHTSHHH
T ss_pred HHHHHHHHhhcCcCee----eCCCCccCHHHHHHHHHh-CCCCEEeCCCcCCHHHHHHHHHcCCCCEEEecccccCCHHH
Confidence 3456788888775433 445667899999999986 899999999999999999888765 77777633 3334567
Q ss_pred HHHHHHHHHHcCCcEEE
Q 018446 277 IRYMTKICKLLGLTALV 293 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLV 293 (355)
...+.++|+..|+.+.+
T Consensus 285 ~~~i~~~A~~~gi~~~~ 301 (382)
T 3dgb_A 285 TLRTAAIAEAAGIGLYG 301 (382)
T ss_dssp HHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHcCCeEee
Confidence 78889999999999864
No 273
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=80.08 E-value=2.8 Score=39.72 Aligned_cols=59 Identities=19% Similarity=0.197 Sum_probs=44.0
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHH----HHHHHHhcCCCCCeec
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFE----NLEAVRSAGVKCPLLC 244 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~e----dL~~VR~a~v~lPVLr 244 (355)
++..||+=+-- | ..+..++++..++.||+|+.|++ |-||..+.+ +++.|.++ +++||+-
T Consensus 80 grvpViaGvg~-s--------t~~ai~la~~A~~~Gadavlv~~-P~y~~~s~~~l~~~f~~va~a-~~lPiil 142 (314)
T 3d0c_A 80 GRATVVAGIGY-S--------VDTAIELGKSAIDSGADCVMIHQ-PVHPYITDAGAVEYYRNIIEA-LDAPSII 142 (314)
T ss_dssp TSSEEEEEECS-S--------HHHHHHHHHHHHHTTCSEEEECC-CCCSCCCHHHHHHHHHHHHHH-SSSCEEE
T ss_pred CCCeEEecCCc-C--------HHHHHHHHHHHHHcCCCEEEECC-CCCCCCCHHHHHHHHHHHHHh-CCCCEEE
Confidence 56789997732 2 12577899999999999999997 678888754 45577765 7888754
No 274
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=80.00 E-value=1.3 Score=42.55 Aligned_cols=75 Identities=15% Similarity=0.042 Sum_probs=59.0
Q ss_pred CHHHHH--HHHHHcCce--EEEEeccCCCCCCCHHHHHHHHhcCC--CCCeeccccccCHHHHHHHHHcCCcchHHHHhc
Q 018446 198 DPVEIA--RSYEKGGAA--CLSILTDEKYFKGSFENLEAVRSAGV--KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (355)
Q Consensus 198 Dp~~iA--~~Ye~~GAa--aISVLTD~~fF~GS~edL~~VR~a~v--~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaai 271 (355)
|| ++| ..|...|+. .=-|-.|-..-....+.++.+++. + ++||..=-=|-++-|+.++..+|||+|.+=-++
T Consensus 182 ~~-e~A~~~aYa~~gad~G~~lV~LD~~~~~v~~e~V~~I~~~-~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAa 259 (286)
T 3vk5_A 182 TA-STEEIDRYLHVARAFGFHMVYLYSRNEHVPPEVVRHFRKG-LGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGAL 259 (286)
T ss_dssp CS-SSHHHHHHHHHHHHTTCSEEEEECSSSCCCHHHHHHHHHH-SCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGG
T ss_pred CH-HHHHHHHHHHHHHHcCCCEEEEcCCCCcCCHHHHHHHHHh-cCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchh
Confidence 44 777 788877763 011444544466789999999986 7 899998877889999999999999999998888
Q ss_pred CCH
Q 018446 272 LPD 274 (355)
Q Consensus 272 L~~ 274 (355)
+.+
T Consensus 260 v~d 262 (286)
T 3vk5_A 260 EQP 262 (286)
T ss_dssp SST
T ss_pred hcC
Confidence 876
No 275
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=79.89 E-value=2.2 Score=41.93 Aligned_cols=93 Identities=14% Similarity=0.123 Sum_probs=73.6
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcCC-HHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL~-~~~ 276 (355)
...+++.+++.|...| |+.+-..+++.+..+|+. +++||..-+-+.++++..++...| +|.|.+=+.-++ -.+
T Consensus 236 A~~~~~~L~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~k~~~~GGit~ 310 (418)
T 3r4e_A 236 AANLGKMLEPYQLFWL----EDCTPAENQEAFRLVRQH-TVTPLAVGEIFNTIWDAKDLIQNQLIDYIRATVVGAGGLTH 310 (418)
T ss_dssp HHHHHHHHGGGCCSEE----ESCSCCSSGGGGHHHHHH-CCSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHH
T ss_pred HHHHHHHHHhhCCCEE----ECCCCccCHHHHHHHHhc-CCCCEEEcCCcCCHHHHHHHHHcCCCCeEecCccccCCHHH
Confidence 4467788888886655 455666789999999986 899999999999999999998887 788777555554 456
Q ss_pred HHHHHHHHHHcCCcEEEEeCCH
Q 018446 277 IRYMTKICKLLGLTALVEVHDE 298 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH~~ 298 (355)
...+..+|+..|+.+. +|+.
T Consensus 311 ~~~ia~~A~~~gi~~~--~h~~ 330 (418)
T 3r4e_A 311 LRRIADLASLYQVRTG--CHGP 330 (418)
T ss_dssp HHHHHHHHHHTTCEEE--ECCC
T ss_pred HHHHHHHHHHcCCEEe--ecCC
Confidence 7788999999999864 5554
No 276
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=79.83 E-value=4.1 Score=38.42 Aligned_cols=97 Identities=20% Similarity=0.216 Sum_probs=73.8
Q ss_pred HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhc--CCHHHH
Q 018446 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV--LPDLDI 277 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaai--L~~~~L 277 (355)
.+....|.++|... |++|.+-.....+. -++.| +.+++.+|-|+|=+-... |+.++.
T Consensus 58 ~eki~l~~~~gV~v--------~~GGTl~E~~~~qg------------~~~~y-l~~~k~lGf~~iEiS~G~i~l~~~~~ 116 (251)
T 1qwg_A 58 KEKINYYKDWGIKV--------YPGGTLFEYAYSKG------------KFDEF-LNECEKLGFEAVEISDGSSDISLEER 116 (251)
T ss_dssp HHHHHHHHTTTCEE--------EECHHHHHHHHHTT------------CHHHH-HHHHHHHTCCEEEECCSSSCCCHHHH
T ss_pred HHHHHHHHHcCCeE--------ECCcHHHHHHHHcC------------cHHHH-HHHHHHcCCCEEEECCCcccCCHHHH
Confidence 35556788888776 78886444433322 23444 678999999998776555 578899
Q ss_pred HHHHHHHHHcCCcEEEEeCCH--------------HHHHHHhccCCCeEEEeeCC
Q 018446 278 RYMTKICKLLGLTALVEVHDE--------------REMDRVLGIEGIELIGINNR 318 (355)
Q Consensus 278 ~~L~~~A~~LGLeaLVEVH~~--------------eELerAl~l~ga~iIGINNR 318 (355)
.++++.+++.|+.++.||... +.+++-|++ ||..|-|..|
T Consensus 117 ~~~I~~~~~~G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeA-GA~~ViiEar 170 (251)
T 1qwg_A 117 NNAIKRAKDNGFMVLTEVGKKMPDKDKQLTIDDRIKLINFDLDA-GADYVIIEGR 170 (251)
T ss_dssp HHHHHHHHHTTCEEEEEECCSSHHHHTTCCHHHHHHHHHHHHHH-TCSEEEECCT
T ss_pred HHHHHHHHHCCCEEeeeccccCCcccCCCCHHHHHHHHHHHHHC-CCcEEEEeee
Confidence 999999999999999999873 346677886 9999999999
No 277
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=79.75 E-value=3.7 Score=39.92 Aligned_cols=93 Identities=14% Similarity=-0.018 Sum_probs=72.3
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCC-HHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGS-FENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDL 275 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS-~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~ 275 (355)
...+++..++.|...| |+.+-.++ ++.+..+|+. +++||..-+-+.+++++.+....| +|.|.+=..-. +-.
T Consensus 215 A~~~~~~L~~~~i~~i----EeP~~~~d~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit 289 (392)
T 3ddm_A 215 ARQMAQRLGPAQLDWL----EEPLRADRPAAEWAELAQA-APMPLAGGENIAGVAAFETALAARSLRVMQPDLAKWGGFS 289 (392)
T ss_dssp HHHHHHHHGGGCCSEE----ECCSCTTSCHHHHHHHHHH-CSSCEEECTTCCSHHHHHHHHHHTCEEEECCCTTTTTHHH
T ss_pred HHHHHHHHHHhCCCEE----ECCCCccchHHHHHHHHHh-cCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCcchhCCHH
Confidence 3456788888886655 45566778 9999999986 899999999999999999987766 67776644444 345
Q ss_pred HHHHHHHHHHHcCCcEEEEeCCH
Q 018446 276 DIRYMTKICKLLGLTALVEVHDE 298 (355)
Q Consensus 276 ~L~~L~~~A~~LGLeaLVEVH~~ 298 (355)
+...+..+|+..|+.+. .|..
T Consensus 290 ~~~~ia~~A~~~gi~~~--~h~~ 310 (392)
T 3ddm_A 290 GCLPVARAVVAAGLRYC--PHYL 310 (392)
T ss_dssp HHHHHHHHHHHTTCEEC--CEEC
T ss_pred HHHHHHHHHHHcCCEEE--ecCC
Confidence 67788999999999974 6763
No 278
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=79.65 E-value=3.6 Score=39.08 Aligned_cols=38 Identities=29% Similarity=0.357 Sum_probs=30.9
Q ss_pred HHHHHHHcC---CcEEEEeCCHHHHHHHhccCCCeEEEeeCC
Q 018446 280 MTKICKLLG---LTALVEVHDEREMDRVLGIEGIELIGINNR 318 (355)
Q Consensus 280 L~~~A~~LG---LeaLVEVH~~eELerAl~l~ga~iIGINNR 318 (355)
-++.+++.. +-.-|||||.+|++.|+.. |+++|++-|-
T Consensus 185 av~~ar~~~~~~~~IgVev~t~eea~eA~~a-GaD~I~ld~~ 225 (286)
T 1x1o_A 185 AVRRAKARAPHYLKVEVEVRSLEELEEALEA-GADLILLDNF 225 (286)
T ss_dssp HHHHHHHHSCTTSCEEEEESSHHHHHHHHHH-TCSEEEEESC
T ss_pred HHHHHHHhCCCCCEEEEEeCCHHHHHHHHHc-CCCEEEECCC
Confidence 345555543 5678999999999999996 9999999995
No 279
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=79.58 E-value=3.3 Score=39.03 Aligned_cols=62 Identities=27% Similarity=0.320 Sum_probs=44.6
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCH----HHHHHHHhcCCCCCeeccc
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSF----ENLEAVRSAGVKCPLLCKE 246 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~----edL~~VR~a~v~lPVLrKD 246 (355)
++..||+=+--.| ..+..++++..++.||+++.|++ |-||..+. ++++.|.++ +++||+-=+
T Consensus 84 grvpviaGvg~~s--------t~~ai~la~~A~~~Gadavlv~~-P~y~~~~~~~l~~~f~~ia~a-~~lPiilYn 149 (304)
T 3cpr_A 84 DRAKLIAGVGTNN--------TRTSVELAEAAASAGADGLLVVT-PYYSKPSQEGLLAHFGAIAAA-TEVPICLYD 149 (304)
T ss_dssp TTSEEEEECCCSC--------HHHHHHHHHHHHHTTCSEEEEEC-CCSSCCCHHHHHHHHHHHHHH-CCSCEEEEE
T ss_pred CCCcEEecCCCCC--------HHHHHHHHHHHHhcCCCEEEECC-CCCCCCCHHHHHHHHHHHHHh-cCCCEEEEe
Confidence 4567998772211 23677899999999999999997 66777774 455677775 688876544
No 280
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=79.35 E-value=9 Score=37.08 Aligned_cols=93 Identities=12% Similarity=0.139 Sum_probs=69.7
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~ 276 (355)
...+++..+..|. .+..+-|| +-..+++.+..+|+. +.+||..-+-+.+.+++......| +|.|.+=..-. +-.+
T Consensus 202 A~~~~~~l~~~~~-~l~~iEeP-~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGi~~ 278 (379)
T 3r0u_A 202 TKQFIEEINKYSL-NVEIIEQP-VKYYDIKAMAEITKF-SNIPVVADESVFDAKDAERVIDEQACNMINIKLAKTGGILE 278 (379)
T ss_dssp HHHHHHHHHTSCC-CEEEEECC-SCTTCHHHHHHHHHH-CSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHHHTSHHH
T ss_pred HHHHHHHHhhcCC-CcEEEECC-CCcccHHHHHHHHhc-CCCCEEeCCccCCHHHHHHHHHcCCCCEEEECccccCCHHH
Confidence 3456677777221 24444454 556789999999986 899999999999999999998887 57777644443 3557
Q ss_pred HHHHHHHHHHcCCcEEEE
Q 018446 277 IRYMTKICKLLGLTALVE 294 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVE 294 (355)
...+.++|+..|+.+.+-
T Consensus 279 ~~~ia~~A~~~gi~~~~~ 296 (379)
T 3r0u_A 279 AQKIKKLADSAGISCMVG 296 (379)
T ss_dssp HHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHcCCEEEEe
Confidence 788999999999997753
No 281
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=79.35 E-value=1.7 Score=41.41 Aligned_cols=64 Identities=13% Similarity=0.078 Sum_probs=48.3
Q ss_pred HHHHHHHHcCCcchHHHHhcCCH------HHHHHHHHHHHHcCCcEEEEeCC-------HH----HHHHHhccCCCeEEE
Q 018446 252 WQIYYARTKGADAVLLIAAVLPD------LDIRYMTKICKLLGLTALVEVHD-------ER----EMDRVLGIEGIELIG 314 (355)
Q Consensus 252 yQI~eAr~~GADAVLLIaaiL~~------~~L~~L~~~A~~LGLeaLVEVH~-------~e----ELerAl~l~ga~iIG 314 (355)
+.+.+|..+|||+|-+-+.+-++ +++..+.+.|++.||-.++|.+- .+ ....|.++ ||++|.
T Consensus 129 ~~ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~el-GAD~VK 207 (295)
T 3glc_A 129 LSMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEM-GAQIIK 207 (295)
T ss_dssp SCHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHT-TCSEEE
T ss_pred HHHHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHh-CCCEEE
Confidence 37899999999999886655442 24557788999999999998753 22 33445666 999999
Q ss_pred ee
Q 018446 315 IN 316 (355)
Q Consensus 315 IN 316 (355)
.+
T Consensus 208 t~ 209 (295)
T 3glc_A 208 TY 209 (295)
T ss_dssp EE
T ss_pred eC
Confidence 98
No 282
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=79.34 E-value=13 Score=33.23 Aligned_cols=64 Identities=11% Similarity=0.043 Sum_probs=42.7
Q ss_pred HHHHHHHHcCCcchHHHHhcC-----C-------HHHHHHHHHHHHHcCCcEEEEeCC------HHHHHHHhccCCCeEE
Q 018446 252 WQIYYARTKGADAVLLIAAVL-----P-------DLDIRYMTKICKLLGLTALVEVHD------EREMDRVLGIEGIELI 313 (355)
Q Consensus 252 yQI~eAr~~GADAVLLIaaiL-----~-------~~~L~~L~~~A~~LGLeaLVEVH~------~eELerAl~l~ga~iI 313 (355)
..|..|..+||+.|.+-...- . -+.|.++.++|.+.|+...+|-|. .+++.+.++.-+.+-+
T Consensus 112 ~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~l~~~v~~~~v 191 (295)
T 3cqj_A 112 KAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYPLMNSISKALGYAHYLNNPWF 191 (295)
T ss_dssp HHHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEEECCSSGGGCSHHHHHHHHHHHCCTTE
T ss_pred HHHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEeeCCCcccCCHHHHHHHHHhcCCCCe
Confidence 356678889998876531110 0 135788889999999999999874 5777776653233446
Q ss_pred Ee
Q 018446 314 GI 315 (355)
Q Consensus 314 GI 315 (355)
|+
T Consensus 192 g~ 193 (295)
T 3cqj_A 192 QL 193 (295)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 283
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=79.33 E-value=6.2 Score=35.60 Aligned_cols=86 Identities=8% Similarity=-0.011 Sum_probs=63.0
Q ss_pred CCHHHHHHHHhcCCCCCe--eccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEE-EeCCHHHH
Q 018446 225 GSFENLEAVRSAGVKCPL--LCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALV-EVHDEREM 301 (355)
Q Consensus 225 GS~edL~~VR~a~v~lPV--LrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLV-EVH~~eEL 301 (355)
-+.+.|..+|+...++|+ |..+.--+. ...++..|++++-+-...+++ .+++.+++.|+.+.+ -|.+.+++
T Consensus 151 F~~~~l~~~~~~~p~~~~~~l~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~----~~v~~~~~~G~~v~~WTvn~~~~~ 224 (252)
T 3qvq_A 151 FNYFALVSAKALWPEIARGYNVSAIPSAW--QERLEHLDCAGLHIHQSFFDV----QQVSDIKAAGYKVLAFTINDESLA 224 (252)
T ss_dssp SCHHHHHHHHHHCTTSCEEEECSSCCTTH--HHHHHHHTCSEEEEEGGGCCH----HHHHHHHHTTCEEEEECCCCHHHH
T ss_pred CCHHHHHHHHHHCCCCcEEEEEecCchhH--HHHHHHcCCeEEecchhhCCH----HHHHHHHHCCCEEEEEcCCCHHHH
Confidence 378888889876556664 443322222 234677899998777777775 578999999999877 57889999
Q ss_pred HHHhccCCCeEEEeeC
Q 018446 302 DRVLGIEGIELIGINN 317 (355)
Q Consensus 302 erAl~l~ga~iIGINN 317 (355)
++.++. |++-|--|.
T Consensus 225 ~~l~~~-GVdgIiTD~ 239 (252)
T 3qvq_A 225 LKLYNQ-GLDAVFSDY 239 (252)
T ss_dssp HHHHHT-TCCEEEESS
T ss_pred HHHHHc-CCCEEEeCC
Confidence 999997 988776553
No 284
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=79.25 E-value=8.8 Score=36.94 Aligned_cols=113 Identities=17% Similarity=0.219 Sum_probs=65.9
Q ss_pred HHHHHHcCceEEEEec----------------cCCCCCCCHHH--------HHHHHhcCC--CCCeecc----ccccCH-
Q 018446 203 ARSYEKGGAACLSILT----------------DEKYFKGSFEN--------LEAVRSAGV--KCPLLCK----EFIVDA- 251 (355)
Q Consensus 203 A~~Ye~~GAaaISVLT----------------D~~fF~GS~ed--------L~~VR~a~v--~lPVLrK----DFIIdp- 251 (355)
|+...++|+++|=+.- -..-|+||+++ +.+||++ + +.||..| ||.=..
T Consensus 164 A~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~a-vg~d~pV~vRis~~~~~~~G~ 242 (363)
T 3l5l_A 164 ARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREV-WPENLPLTARFGVLEYDGRDE 242 (363)
T ss_dssp HHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTT-SCTTSCEEEEEEEECSSSCHH
T ss_pred HHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHH-cCCCceEEEEecchhcCCCCC
Confidence 3444567999987752 12358999874 4566765 4 5787654 443222
Q ss_pred H------H-HHHHHHcCCcchHHHHhcC--------CH-HHHHHHHHHHHHcCCcEEEE--eCCHHHHHHHhccCCCeEE
Q 018446 252 W------Q-IYYARTKGADAVLLIAAVL--------PD-LDIRYMTKICKLLGLTALVE--VHDEREMDRVLGIEGIELI 313 (355)
Q Consensus 252 y------Q-I~eAr~~GADAVLLIaaiL--------~~-~~L~~L~~~A~~LGLeaLVE--VH~~eELerAl~l~ga~iI 313 (355)
+ + +.+...+|+|.|=+...-. ++ ..+.....+.+..++-.+.- ++|.++++++++..++++|
T Consensus 243 ~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD~V 322 (363)
T 3l5l_A 243 QTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSAWGFGTPQLAEAALQANQLDLV 322 (363)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCccEE
Confidence 1 1 2234457999877654211 11 12333334444556544432 4689999999986239999
Q ss_pred Eee
Q 018446 314 GIN 316 (355)
Q Consensus 314 GIN 316 (355)
++-
T Consensus 323 ~iG 325 (363)
T 3l5l_A 323 SVG 325 (363)
T ss_dssp ECC
T ss_pred Eec
Confidence 985
No 285
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=79.10 E-value=2.5 Score=39.31 Aligned_cols=74 Identities=18% Similarity=0.233 Sum_probs=56.4
Q ss_pred HHHHHHcCCcchHHHHh-------------cCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCC
Q 018446 254 IYYARTKGADAVLLIAA-------------VLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNL 320 (355)
Q Consensus 254 I~eAr~~GADAVLLIaa-------------iL~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL 320 (355)
+.+....|+|.|-+.+. .++++++..+++.|+++|+.+.+-+++.++++.++++ |++.|.
T Consensus 178 v~~~~~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i~~~l~~-g~~~i~------ 250 (423)
T 3feq_A 178 VREEIQKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAANTYVMAHAYTGRAIARAVRC-GVRTIE------ 250 (423)
T ss_dssp HHHHHHTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCCEEEEEEEHHHHHHHHHH-TCCEEE------
T ss_pred HHHHHHcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHc-CCCEEe------
Confidence 34455678888877664 6889999999999999999999999999999999986 776554
Q ss_pred CccccChhhHHhhh
Q 018446 321 ETFEVDNSNTKKLL 334 (355)
Q Consensus 321 ~TfevDl~~t~~L~ 334 (355)
+.+-+|.+....+.
T Consensus 251 H~~~~~~~~~~~l~ 264 (423)
T 3feq_A 251 HGNLVDEAAAKLMH 264 (423)
T ss_dssp EEEECCHHHHHHHH
T ss_pred ccCcCCHHHHHHHH
Confidence 33445555444443
No 286
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=79.01 E-value=7 Score=37.63 Aligned_cols=90 Identities=13% Similarity=0.155 Sum_probs=69.8
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHH-HhcCCHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLI-AAVLPDLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLI-aaiL~~~~ 276 (355)
...+++..+..|..-| |+.+-..+++.+..+|+. +++||..-+-+.+.+++.+....| +|.|.+= ..+=+-.+
T Consensus 209 A~~~~~~l~~~~i~~i----EeP~~~~d~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~ 283 (381)
T 3fcp_A 209 GAKGCRELAAMGVDLI----EQPVSAHDNAALVRLSQQ-IETAILADEAVATAYDGYQLAQQGFTGAYALKIAKAGGPNS 283 (381)
T ss_dssp HHHHHHHHHHTTCSEE----ECCBCTTCHHHHHHHHHH-SSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSTTH
T ss_pred HHHHHHHHhhcCccce----eCCCCcccHHHHHHHHHh-CCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHH
Confidence 3456788888875543 555667899999999986 899999999999999999888765 6777663 33323346
Q ss_pred HHHHHHHHHHcCCcEEE
Q 018446 277 IRYMTKICKLLGLTALV 293 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLV 293 (355)
...+.++|+..|+.+.+
T Consensus 284 ~~~ia~~A~~~gi~~~~ 300 (381)
T 3fcp_A 284 VLALARVAQAAGIGLYG 300 (381)
T ss_dssp HHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHcCCceec
Confidence 77889999999999865
No 287
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=78.71 E-value=2.6 Score=41.48 Aligned_cols=93 Identities=11% Similarity=0.095 Sum_probs=73.3
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcCC-HHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL~-~~~ 276 (355)
...+++.+++.|...| |+.+-..+++.+..+|+. +++||..-+-+.++++..++...| +|.|.+=+.-++ -.+
T Consensus 242 A~~~~~~L~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k~~~~GGit~ 316 (424)
T 3v3w_A 242 AARLGKALEPYHLFWM----EDAVPAENQESFKLIRQH-TTTPLAVGEVFNSIHDCRELIQNQWIDYIRTTIVHAGGISQ 316 (424)
T ss_dssp HHHHHHHHGGGCCSEE----ECCSCCSSTTHHHHHHHH-CCSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHH
T ss_pred HHHHHHHHHhcCCCEE----ECCCChHhHHHHHHHHhh-CCCCEEEccCcCCHHHHHHHHHcCCCCeEeecchhcCCHHH
Confidence 4467788888886665 445556789999999986 899999999999999999998887 688777555554 456
Q ss_pred HHHHHHHHHHcCCcEEEEeCCH
Q 018446 277 IRYMTKICKLLGLTALVEVHDE 298 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH~~ 298 (355)
...+..+|+..|+.+. +|+.
T Consensus 317 ~~~ia~~A~~~gi~~~--~h~~ 336 (424)
T 3v3w_A 317 MRRIADFASLFHVRTG--FHGA 336 (424)
T ss_dssp HHHHHHHHHTTTCEEE--ECCC
T ss_pred HHHHHHHHHHcCCEEE--ecCC
Confidence 7788999999999864 5554
No 288
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=78.52 E-value=11 Score=35.18 Aligned_cols=131 Identities=12% Similarity=0.131 Sum_probs=82.6
Q ss_pred CHHHHHHHHHHcCceEEEEec-----cCCCCCCCHHHH-HHHHhcCCCCCe--eccccccCHHHHHHHHHcCCcchHHHH
Q 018446 198 DPVEIARSYEKGGAACLSILT-----DEKYFKGSFENL-EAVRSAGVKCPL--LCKEFIVDAWQIYYARTKGADAVLLIA 269 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLT-----D~~fF~GS~edL-~~VR~a~v~lPV--LrKDFIIdpyQI~eAr~~GADAVLLIa 269 (355)
+-.++++...+.|...|=+-. +-.++ ++.+.+ +.+++. .++|+ |. -+.-.|..|..+|+|.|-+..
T Consensus 31 ~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~-~d~~~~~~~~~~~-~~~~~~~l~----~~~~~i~~a~~aG~~~v~i~~ 104 (302)
T 2ftp_A 31 DKIRLVDDLSAAGLDYIEVGSFVSPKWVPQM-AGSAEVFAGIRQR-PGVTYAALA----PNLKGFEAALESGVKEVAVFA 104 (302)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECSCTTTCGGG-TTHHHHHHHSCCC-TTSEEEEEC----CSHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHcCcCEEEECCCcCccccccc-cCHHHHHHHhhhc-CCCEEEEEe----CCHHHHHHHHhCCcCEEEEEE
Confidence 455788888888888887753 11233 444433 333221 23343 33 256788889999999876533
Q ss_pred hcCCH---------------HHHHHHHHHHHHcCCcEEEEe-----------CCHHHHHHHh----ccCCCeEEEeeCCC
Q 018446 270 AVLPD---------------LDIRYMTKICKLLGLTALVEV-----------HDEREMDRVL----GIEGIELIGINNRN 319 (355)
Q Consensus 270 aiL~~---------------~~L~~L~~~A~~LGLeaLVEV-----------H~~eELerAl----~l~ga~iIGINNRd 319 (355)
+. ++ +.+.+.+++|+++|+++-.|+ ++.+++.+.. +. |++.|.|- |
T Consensus 105 ~~-s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~-G~d~i~l~--D 180 (302)
T 2ftp_A 105 AA-SEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQM-GCYEVSLG--D 180 (302)
T ss_dssp ES-CHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHT-TCSEEEEE--E
T ss_pred ec-CHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHc-CCCEEEEe--C
Confidence 33 22 346788999999999865443 5677776655 44 99999888 3
Q ss_pred CCccccChhhHHhhhccccc
Q 018446 320 LETFEVDNSNTKKLLEGERG 339 (355)
Q Consensus 320 L~TfevDl~~t~~L~~~~~~ 339 (355)
-... ..+....+++..++.
T Consensus 181 T~G~-~~P~~~~~lv~~l~~ 199 (302)
T 2ftp_A 181 TIGV-GTAGATRRLIEAVAS 199 (302)
T ss_dssp SSSC-CCHHHHHHHHHHHTT
T ss_pred CCCC-cCHHHHHHHHHHHHH
Confidence 3333 457777777765443
No 289
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=78.51 E-value=6.2 Score=38.55 Aligned_cols=114 Identities=11% Similarity=0.062 Sum_probs=82.6
Q ss_pred HHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCH---HHHHHHHHHcCceEEEEeccCC-CCCCCHHHHHHHHhcCC
Q 018446 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDP---VEIARSYEKGGAACLSILTDEK-YFKGSFENLEAVRSAGV 238 (355)
Q Consensus 163 F~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp---~~iA~~Ye~~GAaaISVLTD~~-fF~GS~edL~~VR~a~v 238 (355)
...++++... ....+..+. +..+++ ..+++.+++.|...| |+. .-.++++.+..+|+. +
T Consensus 202 ~v~avR~a~g--~d~~l~vDa----------N~~~~~~~A~~~~~~L~~~~i~~i----EqP~~~~~~~~~~~~l~~~-~ 264 (410)
T 3dip_A 202 PFRKIRAAVG--QRIEIMCEL----------HSLWGTHAAARICNALADYGVLWV----EDPIAKMDNIPAVADLRRQ-T 264 (410)
T ss_dssp HHHHHHHHHT--TSSEEEEEC----------TTCBCHHHHHHHHHHGGGGTCSEE----ECCBSCTTCHHHHHHHHHH-H
T ss_pred HHHHHHHHcC--CCceEEEEC----------CCCCCHHHHHHHHHHHHhcCCCEE----ECCCCCcccHHHHHHHHhh-C
Confidence 3455665431 234577664 223344 456778888776554 444 356789999999986 8
Q ss_pred CCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHHHHHHHHHHHHcCCcEEE
Q 018446 239 KCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLDIRYMTKICKLLGLTALV 293 (355)
Q Consensus 239 ~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~L~~L~~~A~~LGLeaLV 293 (355)
++||..-+-+.++++..+....| +|.|.+=+.-. +-.+...+.++|+..|+.+.+
T Consensus 265 ~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~ 321 (410)
T 3dip_A 265 RAPICGGENLAGTRRFHEMLCADAIDFVMLDLTWCGGLSEGRKIAALAETHARPLAP 321 (410)
T ss_dssp CCCEEECTTCCSHHHHHHHHHTTCCSEEEECTTTSSCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEecCCcCCHHHHHHHHHcCCCCeEeecccccCCHHHHHHHHHHHHHcCCEEee
Confidence 99999999999999999998887 68877755555 456788899999999998764
No 290
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=78.47 E-value=4.8 Score=38.64 Aligned_cols=116 Identities=9% Similarity=0.007 Sum_probs=80.9
Q ss_pred HHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHH---HHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCC
Q 018446 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPV---EIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVK 239 (355)
Q Consensus 163 F~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~---~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~ 239 (355)
...++++... ....+..+. +..+++. .+++..++.|. ..+ |+.+-..+++.+..+|+. ++
T Consensus 186 ~v~avR~~~g--~~~~l~vDa----------n~~~~~~~a~~~~~~l~~~~i---~~i-EqP~~~~d~~~~~~l~~~-~~ 248 (372)
T 3tj4_A 186 RLTAVRERVD--SAVRIAIDG----------NGKWDLPTCQRFCAAAKDLDI---YWF-EEPLWYDDVTSHARLARN-TS 248 (372)
T ss_dssp HHHHHHHHSC--TTCEEEEEC----------TTCCCHHHHHHHHHHTTTSCE---EEE-ESCSCTTCHHHHHHHHHH-CS
T ss_pred HHHHHHHHcC--CCCcEEeeC----------CCCCCHHHHHHHHHHHhhcCC---CEE-ECCCCchhHHHHHHHHhh-cC
Confidence 3455655421 234566664 2334544 45666666654 334 444567889999999986 89
Q ss_pred CCeeccccccCHHHHHHHHHcC-CcchHHHHhcCC-HHHHHHHHHHHHHcCCcEEEEeCC
Q 018446 240 CPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVEVHD 297 (355)
Q Consensus 240 lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL~-~~~L~~L~~~A~~LGLeaLVEVH~ 297 (355)
+||..-+-+.+++++.+....| +|.|.+=..-++ -.+...+..+|+..|+.+. +|.
T Consensus 249 iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~--~h~ 306 (372)
T 3tj4_A 249 IPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAHRLPVV--PHA 306 (372)
T ss_dssp SCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCCBC--CCC
T ss_pred CCEEeCCCccCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEE--ecC
Confidence 9999999999999999988877 587776444443 4567788999999999865 566
No 291
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=78.18 E-value=8.5 Score=36.61 Aligned_cols=70 Identities=24% Similarity=0.263 Sum_probs=44.0
Q ss_pred cccc-ccCHHHHHHHHHcCCc--------chHH----HHhcCCHHHHHHHHHHHHH-cC-CcEEEEeCCHHHHHHHhccC
Q 018446 244 CKEF-IVDAWQIYYARTKGAD--------AVLL----IAAVLPDLDIRYMTKICKL-LG-LTALVEVHDEREMDRVLGIE 308 (355)
Q Consensus 244 rKDF-IIdpyQI~eAr~~GAD--------AVLL----IaaiL~~~~L~~L~~~A~~-LG-LeaLVEVH~~eELerAl~l~ 308 (355)
||.+ ..-.++-|.++.-|++ +|++ |... + .+..-++.+++ .+ +...|||+|.+|+..|+.+
T Consensus 152 Rkt~P~~r~~e~~Av~~GG~~~hr~~l~d~vlikdnhi~~~-G--ti~~ai~~~r~~~~~~kI~vev~tlee~~eA~~a- 227 (296)
T 1qap_A 152 RKTLPGLRTALKYAVLCGGGANHRLGLTDAFLIKENHIIAS-G--SVRQAVEKAFWLHPDVPVEVEVENLDELDDALKA- 227 (296)
T ss_dssp SCCCTTCHHHHHHHHHHHTCBCCCSSSSSCEEECHHHHHHH-S--SHHHHHHHHHHHSTTSCEEEEESSHHHHHHHHHT-
T ss_pred CCCCcccHHHHHHHHHHCCchhhccccccEEEEEcCCeecc-C--CHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHc-
Confidence 4443 2445677777788876 4541 2221 1 01122223332 33 2689999999999999996
Q ss_pred CCeEEEeeC
Q 018446 309 GIELIGINN 317 (355)
Q Consensus 309 ga~iIGINN 317 (355)
|+++|++.|
T Consensus 228 GaD~I~ld~ 236 (296)
T 1qap_A 228 GADIIMLDN 236 (296)
T ss_dssp TCSEEEESS
T ss_pred CCCEEEECC
Confidence 999999988
No 292
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=78.13 E-value=4.9 Score=41.21 Aligned_cols=108 Identities=19% Similarity=0.159 Sum_probs=68.2
Q ss_pred CCCHHHHHHHHHHcCceEEEEeccCCCCCCC-HHHHHHH---HhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhc
Q 018446 196 DFDPVEIARSYEKGGAACLSILTDEKYFKGS-FENLEAV---RSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (355)
Q Consensus 196 ~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS-~edL~~V---R~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaai 271 (355)
..+..+..+.-.++|+.+|=+- ++..=... ++....+ ++. ...|++-.|.+ ..|..+|||+|=|=-.-
T Consensus 24 ~~~l~~~ve~al~~Gv~~vQlR-~K~~~~~~~~~~a~~l~~l~~~-~~v~liIND~~------dlA~~~gAdGVHLgq~d 95 (540)
T 3nl6_A 24 GKTLYGQVEAGLQNGVTLVQIR-EKDADTKFFIEEALQIKELCHA-HNVPLIINDRI------DVAMAIGADGIHVGQDD 95 (540)
T ss_dssp TCCHHHHHHHHHHTTCSEEEEC-CSSSCTTHHHHHHHHHHHHHHH-TTCCEEECSCS------HHHHHTTCSEEEECTTS
T ss_pred cchHHHHHHHHHHCCCCEEEEe-cCCCCHHHHHHHHHHHHHHHHh-cCCEEEEeCcH------HHHHHcCCCEEEEChhh
Confidence 3467788888888998887553 33221111 2222222 232 46788777732 45888999998664444
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCC---CeEEEee
Q 018446 272 LPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEG---IELIGIN 316 (355)
Q Consensus 272 L~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~g---a~iIGIN 316 (355)
++..+.+.++ .-++-.=+-+||.+|+.+|... | ++.||+-
T Consensus 96 l~~~~ar~~l----g~~~iiG~S~ht~eea~~A~~~-G~~~aDYv~~G 138 (540)
T 3nl6_A 96 MPIPMIRKLV----GPDMVIGWSVGFPEEVDELSKM-GPDMVDYIGVG 138 (540)
T ss_dssp SCHHHHHHHH----CTTSEEEEEECSHHHHHHHHHT-CC--CCEEEES
T ss_pred cCHHHHHHHh----CCCCEEEEECCCHHHHHHHHHc-CCCCCCEEEEc
Confidence 4433333221 2356677889999999999986 8 9999993
No 293
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=78.07 E-value=1.9 Score=41.71 Aligned_cols=75 Identities=19% Similarity=0.107 Sum_probs=58.4
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCC----CHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcCC
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKG----SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP 273 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~G----S~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL~ 273 (355)
..++|+..++.|++.|.|-.- .|.| ..+.+..+|++ +++||+.--=| ++.+..++...| ||+|-+--++|.
T Consensus 252 ~~~~a~~l~~~G~d~i~v~~~--~~~~~~~~~~~~~~~i~~~-~~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~i~ 327 (365)
T 2gou_A 252 YTAAAALLNKHRIVYLHIAEV--DWDDAPDTPVSFKRALREA-YQGVLIYAGRY-NAEKAEQAINDGLADMIGFGRPFIA 327 (365)
T ss_dssp HHHHHHHHHHTTCSEEEEECC--BTTBCCCCCHHHHHHHHHH-CCSEEEEESSC-CHHHHHHHHHTTSCSEEECCHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeCC--CcCCCCCccHHHHHHHHHH-CCCcEEEeCCC-CHHHHHHHHHCCCcceehhcHHHHh
Confidence 467899999999999998652 1111 35778899986 89999887666 999999999999 999988777665
Q ss_pred HHHH
Q 018446 274 DLDI 277 (355)
Q Consensus 274 ~~~L 277 (355)
+-++
T Consensus 328 ~P~l 331 (365)
T 2gou_A 328 NPDL 331 (365)
T ss_dssp CTTH
T ss_pred CchH
Confidence 5443
No 294
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=77.97 E-value=7 Score=38.13 Aligned_cols=115 Identities=11% Similarity=0.042 Sum_probs=82.1
Q ss_pred HHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCH---HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCC
Q 018446 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDP---VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVK 239 (355)
Q Consensus 163 F~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp---~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~ 239 (355)
...++++... ....|..+. +..+++ ..+++.+++.|...|= +|- .+++.+..+|+. ++
T Consensus 202 ~v~avR~avG--~d~~l~vDa----------N~~~~~~~A~~~~~~L~~~~i~~iE---~P~---~d~~~~~~l~~~-~~ 262 (409)
T 3go2_A 202 HLEALRDGAG--PDVEILLDL----------NFNAKPEGYLKILRELADFDLFWVE---IDS---YSPQGLAYVRNH-SP 262 (409)
T ss_dssp HHHHHHHHHC--TTSEEEEEC----------TTCSCHHHHHHHHHHTTTSCCSEEE---CCC---SCHHHHHHHHHT-CS
T ss_pred HHHHHHHHhC--CCCEEEEEC----------CCCCCHHHHHHHHHHHhhcCCeEEE---eCc---CCHHHHHHHHhh-CC
Confidence 3455665431 234566653 223444 4577888888876665 453 389999999985 89
Q ss_pred CCeeccccccCHHHHHHHHHcC-CcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeCCH
Q 018446 240 CPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDE 298 (355)
Q Consensus 240 lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH~~ 298 (355)
+||..-+-+.++++..+....| +|.|.+=+.-=+-.+...+..+|+..|+.+.+ |..
T Consensus 263 iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~GGit~~~~ia~~A~~~gi~~~~--h~~ 320 (409)
T 3go2_A 263 HPISSCETLFGIREFKPFFDANAVDVAIVDTIWNGVWQSMKIAAFADAHDINVAP--HNF 320 (409)
T ss_dssp SCEEECTTCCHHHHHHHHHHTTCCSEEEECHHHHCHHHHHHHHHHHHHTTCEEEE--CCC
T ss_pred CCEEeCCCcCCHHHHHHHHHhCCCCEEEeCCCCCCHHHHHHHHHHHHHcCCEEee--cCC
Confidence 9999999999999999998887 68776633323345677889999999999875 863
No 295
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=77.82 E-value=4.3 Score=39.34 Aligned_cols=100 Identities=11% Similarity=-0.029 Sum_probs=77.3
Q ss_pred HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcCC-HHHH
Q 018446 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DLDI 277 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL~-~~~L 277 (355)
..+++.+++.|...| |+.+-..+++.+..+|+. +++||..-+-+.+++++.+....| +|.|.+=+.-.+ -.+.
T Consensus 230 ~~~~~~l~~~~i~~i----EeP~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~ 304 (383)
T 3toy_A 230 TRRIARLADYDLTWI----EEPVPQENLSGHAAVRER-SEIPIQAGENWWFPRGFAEAIAAGASDFIMPDLMKVGGITGW 304 (383)
T ss_dssp HHHHHHHGGGCCSEE----ECCSCTTCHHHHHHHHHH-CSSCEEECTTCCHHHHHHHHHHHTCCSEECCCTTTTTHHHHH
T ss_pred HHHHHHHHhhCCCEE----ECCCCcchHHHHHHHHhh-cCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHH
Confidence 457788888886554 455667899999999986 899999999999999999888777 677776455553 4567
Q ss_pred HHHHHHHHHcCCcEEEEeCCHHHHHHHhc
Q 018446 278 RYMTKICKLLGLTALVEVHDEREMDRVLG 306 (355)
Q Consensus 278 ~~L~~~A~~LGLeaLVEVH~~eELerAl~ 306 (355)
..+.++|+..|+.+. +|+.-|.-..+.
T Consensus 305 ~~ia~~A~~~gi~~~--~h~~~~a~lhl~ 331 (383)
T 3toy_A 305 LNVAGQADAASIPMS--SHILPEASAHVL 331 (383)
T ss_dssp HHHHHHHHHHTCCBC--CCSCHHHHHHHG
T ss_pred HHHHHHHHHcCCEEe--ecCHHHHHHHHH
Confidence 788999999999965 677766554443
No 296
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=77.41 E-value=3.3 Score=39.82 Aligned_cols=50 Identities=14% Similarity=0.307 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCcccc
Q 018446 274 DLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEV 325 (355)
Q Consensus 274 ~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~Tfev 325 (355)
.+-|+.|.++|+++||..+.|++|.+.++.+.+. ++++-|-.||..+++.
T Consensus 98 ~~GL~~L~~~~~e~GLpv~Tev~D~~~v~~l~~~--vd~lkIgA~~~~n~~L 147 (298)
T 3fs2_A 98 EKALEVFSDLKKEYGFPVLTDIHTEEQCAAVAPV--VDVLQIPAFLCRQTDL 147 (298)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCSHHHHHHHTTT--CSEEEECGGGTTCHHH
T ss_pred HHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhh--CCEEEECccccCCHHH
Confidence 4568889999999999999999999999998775 8999999999988874
No 297
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=77.17 E-value=4 Score=40.01 Aligned_cols=92 Identities=8% Similarity=0.051 Sum_probs=72.3
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcCC-HHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL~-~~~ 276 (355)
...+++..++.|...| |+.+-..+++.+..+|+. +++||..-+-+.+++++.+....| +|.|.+=+.-.+ -.+
T Consensus 194 A~~~~~~L~~~~i~~i----EeP~~~~d~~~~~~l~~~-~~iPIa~dE~i~~~~~~~~~l~~~a~d~v~~d~~~~GGite 268 (405)
T 3rr1_A 194 AKVLIKELEPYRPLFI----EEPVLAEQAETYARLAAH-THLPIAAGERMFSRFDFKRVLEAGGVSILQPDLSHAGGITE 268 (405)
T ss_dssp HHHHHHHHGGGCCSCE----ECSSCCSSTHHHHHHHTT-CSSCEEECTTCCSHHHHHHHHHHCCCSEECCBTTTTTHHHH
T ss_pred HHHHHHHHHhcCCCEE----ECCCCcccHHHHHHHHhc-CCCCEEecCCcCCHHHHHHHHHHhCCCeEEEChhhcCCHHH
Confidence 3456788888886655 455566789999999985 899999999999999999888776 787777555553 456
Q ss_pred HHHHHHHHHHcCCcEEEEeCC
Q 018446 277 IRYMTKICKLLGLTALVEVHD 297 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH~ 297 (355)
...+..+|+..|+.+. +|+
T Consensus 269 a~kia~lA~~~gi~v~--~h~ 287 (405)
T 3rr1_A 269 CVKIAAMAEAYDVALA--PHC 287 (405)
T ss_dssp HHHHHHHHHTTTCEEC--CBC
T ss_pred HHHHHHHHHHcCCEEE--eCC
Confidence 7788999999999865 465
No 298
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=77.14 E-value=16 Score=33.69 Aligned_cols=123 Identities=18% Similarity=0.125 Sum_probs=78.3
Q ss_pred CCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeecc-----cc-c-----cCHHHHHHHHHcCCc
Q 018446 195 EDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCK-----EF-I-----VDAWQIYYARTKGAD 263 (355)
Q Consensus 195 ~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrK-----DF-I-----IdpyQI~eAr~~GAD 263 (355)
...|+..+.+...+.|++++-|. +..+..+. . .+.|++-| .| . .--+++.+|...|||
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~---------~~~v~~~~-~-~~~~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~~Ga~ 107 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQ---------RGIAEKYY-D-GSVPLILKLNGKTTLYNGEPVSVANCSVEEAVSLGAS 107 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEEC---------HHHHHHHC-C-SSSCEEEECEECCTTCCSSCCCEESSCHHHHHHTTCS
T ss_pred chhhHHHHHHHHHhhCCCEEEEC---------HHHHHHhh-c-CCCcEEEEEeCCCCcCCCCccchHHHHHHHHHHCCCC
Confidence 35688999999999998876543 23344332 2 23342211 01 0 122678999999999
Q ss_pred chHHHH--hcCCH----HHHHHHHHHHHHcCCcEEEEeC----------CHHHHHH----HhccCCCeEEEeeCCCCCcc
Q 018446 264 AVLLIA--AVLPD----LDIRYMTKICKLLGLTALVEVH----------DEREMDR----VLGIEGIELIGINNRNLETF 323 (355)
Q Consensus 264 AVLLIa--aiL~~----~~L~~L~~~A~~LGLeaLVEVH----------~~eELer----Al~l~ga~iIGINNRdL~Tf 323 (355)
+|-+-. .-.+. +++..+.+.|+..|+-.++|.+ +.+++.. +.++ ||+.|++.-
T Consensus 108 ~v~~~~nig~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~-GAD~vkt~~------ 180 (263)
T 1w8s_A 108 AVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALEL-GADAMKIKY------ 180 (263)
T ss_dssp EEEEEECTTSTTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHH-TCSEEEEEC------
T ss_pred EEEEEEecCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHc-CCCEEEEcC------
Confidence 997755 22222 3456677788899999999986 4555554 4554 999999992
Q ss_pred ccChhhHHhhhc
Q 018446 324 EVDNSNTKKLLE 335 (355)
Q Consensus 324 evDl~~t~~L~~ 335 (355)
..+++...++..
T Consensus 181 ~~~~e~~~~~~~ 192 (263)
T 1w8s_A 181 TGDPKTFSWAVK 192 (263)
T ss_dssp CSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 235555555543
No 299
>3kw3_A Alanine racemase; niaid, ssgcid, seattle structural genomics center for infect disease, iodide SOAK, LLP, CAT-scratch DI isomerase; HET: LLP; 2.04A {Bartonella henselae}
Probab=77.06 E-value=11 Score=36.61 Aligned_cols=105 Identities=13% Similarity=0.176 Sum_probs=73.3
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcC-CCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHH
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAG-VKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLD 276 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~-v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~ 276 (355)
...++|+...++|+..+.|.+ ++....+|+++ .+.|+|.=-.+ .+-++.++..++ ++..+=+.++
T Consensus 58 G~~~va~~l~~~G~~~f~Va~--------~~Ea~~lr~ag~~~~~ilvl~~~-~~~~~~~~~~~~-----i~~~V~s~~~ 123 (376)
T 3kw3_A 58 GAHKIAPALYQAGCRTFFVAQ--------IEEALQLKAVLPENVMIALLNGF-PHKAEEFVAQSG-----IIPLLNSWST 123 (376)
T ss_dssp CHHHHHHHHHHTTCCEEEESS--------HHHHHHHHHHSCSSCEEEETTCC-CTTCHHHHHHTT-----CEEEECSHHH
T ss_pred CHHHHHHHHHHcCCCEEEEeE--------HHHHHHHHhcCCCCCCEEEEeCC-CHHHHHHHHHCC-----CEEEECCHHH
Confidence 356899999999999977754 77788888876 67787643322 344555555543 2445667788
Q ss_pred HHHHHHHHHHcC--CcEEEEeCC--------HHHHHHHhc----cCCCeEEEee
Q 018446 277 IRYMTKICKLLG--LTALVEVHD--------EREMDRVLG----IEGIELIGIN 316 (355)
Q Consensus 277 L~~L~~~A~~LG--LeaLVEVH~--------~eELerAl~----l~ga~iIGIN 316 (355)
++.|.+.|.+.| +.++++|.+ .+|+..+++ +++.++.|+=
T Consensus 124 l~~l~~~a~~~~~~~~V~lkVdtGm~R~G~~~~e~~~l~~~i~~~~~l~l~Gl~ 177 (376)
T 3kw3_A 124 IEDWQTLCQKKNKKFPAIIQVDTNMSRLGLDKKELQKLIKNPTIFEKAEIKYIL 177 (376)
T ss_dssp HHHHHHHHHHHTCCCEEEEEBCSSCCSSSBCHHHHHHHHHCCTHHHHSEEEEEE
T ss_pred HHHHHHHHHHcCCCeEEEEEECCCCCcccCCHHHHHHHHHHHHhCCCCcEEEEE
Confidence 999999988876 678999976 466666543 2356788874
No 300
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=76.90 E-value=4.3 Score=38.97 Aligned_cols=91 Identities=12% Similarity=0.107 Sum_probs=72.2
Q ss_pred HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHHH
Q 018446 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLDI 277 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~L 277 (355)
..+++.+++.|...| |+.+-.++++.+..+|+. +++||..-+-+.+++++.+....| +|.|.+=..-+ +-.+.
T Consensus 201 ~~~~~~l~~~~i~~i----EqP~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~ 275 (368)
T 3q45_A 201 IETLTLLEPYNIQHC----EEPVSRNLYTALPKIRQA-CRIPIMADESCCNSFDAERLIQIQACDSFNLKLSKSAGITNA 275 (368)
T ss_dssp HHHHHHHGGGCCSCE----ECCBCGGGGGGHHHHHHT-CSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHH
T ss_pred HHHHHHHhhcCCCEE----ECCCChhHHHHHHHHHhh-CCCCEEEcCCcCCHHHHHHHHHcCCCCeEEechhhcCCHHHH
Confidence 457788888776554 455556778899999985 899999999999999999988765 68877755555 45677
Q ss_pred HHHHHHHHHcCCcEEEEe
Q 018446 278 RYMTKICKLLGLTALVEV 295 (355)
Q Consensus 278 ~~L~~~A~~LGLeaLVEV 295 (355)
..+.++|+..|+.+.+-.
T Consensus 276 ~~i~~~A~~~gi~~~~~~ 293 (368)
T 3q45_A 276 LNIIRLAEQAHMPVQVGG 293 (368)
T ss_dssp HHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHcCCcEEecC
Confidence 889999999999988743
No 301
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=76.89 E-value=2.6 Score=41.11 Aligned_cols=74 Identities=23% Similarity=0.220 Sum_probs=57.1
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcCCHHH
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPDLD 276 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL~~~~ 276 (355)
+..++|+.+++.|++.|.|-.-. .|. +.+..+|++ +++||+.--=| ++-+..++...| ||+|-+==++|.+-+
T Consensus 243 ~~~~la~~l~~~Gvd~i~v~~~~---~~~-~~~~~ik~~-~~iPvi~~Ggi-t~e~a~~~l~~g~aD~V~iGR~~lanPd 316 (362)
T 4ab4_A 243 TFTYVARELGKRGIAFICSRERE---ADD-SIGPLIKEA-FGGPYIVNERF-DKASANAALASGKADAVAFGVPFIANPD 316 (362)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCC---CTT-CCHHHHHHH-HCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTT
T ss_pred HHHHHHHHHHHhCCCEEEECCCC---CCH-HHHHHHHHH-CCCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHhCcH
Confidence 35678999999999999986533 233 567889986 88998776556 999999999998 999987666665544
Q ss_pred H
Q 018446 277 I 277 (355)
Q Consensus 277 L 277 (355)
+
T Consensus 317 l 317 (362)
T 4ab4_A 317 L 317 (362)
T ss_dssp H
T ss_pred H
Confidence 3
No 302
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=76.80 E-value=7.7 Score=38.67 Aligned_cols=107 Identities=10% Similarity=0.111 Sum_probs=78.0
Q ss_pred CCCHHHHHHHHH----HcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeecccc-ccCHHHHHHHHHcC-CcchHH-H
Q 018446 196 DFDPVEIARSYE----KGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEF-IVDAWQIYYARTKG-ADAVLL-I 268 (355)
Q Consensus 196 ~~Dp~~iA~~Ye----~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDF-IIdpyQI~eAr~~G-ADAVLL-I 268 (355)
.+++.+.+..|. +.+ .++ -|..+-..+++.++.+++. .++||.--|. +..++++.++...| +|+|++ +
T Consensus 269 ~~t~~e~~~~~~~ll~~y~--i~~--IEdPl~~dD~~g~~~L~~~-~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~iKv 343 (439)
T 2akz_A 269 YITGDQLGALYQDFVRDYP--VVS--IEDPFDQDDWAAWSKFTAN-VGIQIVGDDLTVTNPKRIERAVEEKACNCLLLKV 343 (439)
T ss_dssp CBCHHHHHHHHHHHHHHSC--EEE--EECCSCTTCHHHHHHHHHT-CSSEEEESTTTTTCHHHHHHHHHTTCCSEEEECH
T ss_pred cCCHHHHHHHHHHHHHhCC--CcE--EECCCCcccHHHHHHHHhC-CCCEEEeCCCccCCHHHHHHHHHhCCCCEEEech
Confidence 357776555443 444 333 3666788999999999986 8999999995 56999999999988 677777 5
Q ss_pred HhcCCHHHHHHHHHHHHHcCCcEEEE-------eCCHHHHHHHhcc
Q 018446 269 AAVLPDLDIRYMTKICKLLGLTALVE-------VHDEREMDRVLGI 307 (355)
Q Consensus 269 aaiL~~~~L~~L~~~A~~LGLeaLVE-------VH~~eELerAl~l 307 (355)
..+=+--+..+..++|+..|+.+.+- +....+|.-++.+
T Consensus 344 ~qiGGitea~~ia~lA~~~g~~~~~sh~~gEt~~~~iA~lava~~~ 389 (439)
T 2akz_A 344 NQIGSVTEAIQACKLAQENGWGVMVSHRSGETEDTFIADLVVGLCT 389 (439)
T ss_dssp HHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHHTC
T ss_pred hhcCCHHHHHHHHHHHHHCCCeEEeecCCCccHHHHHHHHHHHhcC
Confidence 55545567788999999999999883 2233455555543
No 303
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=76.51 E-value=16 Score=33.45 Aligned_cols=81 Identities=10% Similarity=-0.038 Sum_probs=50.9
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCCCH------HHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhc
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKGSF------ENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~------edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaai 271 (355)
++.++.+...+.|-.+.|+.+. ++.+++ +.+..++ --|..|..+||..|.+- ..
T Consensus 77 ~~~~l~~~l~~~GL~i~~~~~~--~~~~~~~~~~~~~~~~~~~-----------------~~i~~A~~lG~~~v~~~-~~ 136 (305)
T 3obe_A 77 ASKDYKKMVDDAGLRISSSHLT--PSLREYTKENMPKFDEFWK-----------------KATDIHAELGVSCMVQP-SL 136 (305)
T ss_dssp CHHHHHHHHHHTTCEEEEEBCC--CSCCCCCGGGHHHHHHHHH-----------------HHHHHHHHHTCSEEEEC-CC
T ss_pred CHHHHHHHHHHCCCeEEEeecc--ccccccchhhHHHHHHHHH-----------------HHHHHHHHcCCCEEEeC-CC
Confidence 7778888888888887777543 221211 1111222 23555777777776632 11
Q ss_pred ---CC-------HHHHHHHHHHHHHcCCcEEEEeCCH
Q 018446 272 ---LP-------DLDIRYMTKICKLLGLTALVEVHDE 298 (355)
Q Consensus 272 ---L~-------~~~L~~L~~~A~~LGLeaLVEVH~~ 298 (355)
.+ -+.|.++.++|.+.|+...+|-|+.
T Consensus 137 ~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~ 173 (305)
T 3obe_A 137 PRIENEDDAKVVSEIFNRAGEITKKAGILWGYHNHSN 173 (305)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHTTTCEEEEECCSG
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEEecCcc
Confidence 01 1467788899999999999998864
No 304
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=76.39 E-value=2.8 Score=40.40 Aligned_cols=135 Identities=19% Similarity=0.283 Sum_probs=83.5
Q ss_pred CCccHHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceE----E--EEeccCCC--CCCCH-HH
Q 018446 159 PARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAAC----L--SILTDEKY--FKGSF-EN 229 (355)
Q Consensus 159 p~rdF~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaa----I--SVLTD~~f--F~GS~-ed 229 (355)
.++.|.++++.. ...|+.=.|-.|-- | -..++| .+ -||+.- + +||--.++ |-|+. +-
T Consensus 132 ~T~~~v~~~~~~------~~~i~dTRKT~PGl---R---~lekyA-V~-~GGg~nHR~gL~D~vLIKdNHi~~~G~i~~A 197 (300)
T 3l0g_A 132 ITRQFVDEVSGT------KVKIRSTRKTTPGL---R---MLDKYS-VC-IGGGESYRDNLCDGVLIKDNHIASCGSITLA 197 (300)
T ss_dssp HHHHHHHHTTTS------SCEEECCSCCCTTC---H---HHHHHH-HH-HTTCBCSCSSTTSCEEECHHHHHHHSCHHHH
T ss_pred HHHHHHHHhCCC------CEEEeecCccChhh---h---HHHHHH-HH-hcCCcccccCCcceEEEcHhHHHHhCCHHHH
Confidence 356677776542 36788888888842 2 122222 23 345421 0 12221111 34554 45
Q ss_pred HHHHHhcCCCCC--eeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeC---CHHHHHHH
Q 018446 230 LEAVRSAGVKCP--LLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRV 304 (355)
Q Consensus 230 L~~VR~a~v~lP--VLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH---~~eELerA 304 (355)
++.+|+.....| |.+.+ .-|..||..+|||.|+| .=++++++++.++.... .+++|+. |++.+...
T Consensus 198 v~~ar~~~p~~kIeVEv~t----l~e~~eAl~aGaDiImL--Dn~s~~~l~~av~~~~~---~v~leaSGGIt~~~i~~~ 268 (300)
T 3l0g_A 198 IQRLRKNLKNEYIAIECDN----ISQVEESLSNNVDMILL--DNMSISEIKKAVDIVNG---KSVLEVSGCVNIRNVRNI 268 (300)
T ss_dssp HHHHHHHSSSCCEEEEESS----HHHHHHHHHTTCSEEEE--ESCCHHHHHHHHHHHTT---SSEEEEESSCCTTTHHHH
T ss_pred HHHHHHhCCCCCEEEEECC----HHHHHHHHHcCCCEEEE--CCCCHHHHHHHHHhhcC---ceEEEEECCCCHHHHHHH
Confidence 667776422333 34444 37999999999999988 55778888888776652 7899994 77777777
Q ss_pred hccCCCeEEEeeC
Q 018446 305 LGIEGIELIGINN 317 (355)
Q Consensus 305 l~l~ga~iIGINN 317 (355)
... |+++|++-.
T Consensus 269 A~t-GVD~IsvGa 280 (300)
T 3l0g_A 269 ALT-GVDYISIGC 280 (300)
T ss_dssp HTT-TCSEEECGG
T ss_pred HHc-CCCEEEeCc
Confidence 775 999999753
No 305
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=76.33 E-value=2.7 Score=42.25 Aligned_cols=72 Identities=22% Similarity=0.169 Sum_probs=50.9
Q ss_pred HHHHHHHHcCceEEEEeccCCCC------C----CCHHHHHHHHhcC--C------CCCeeccccccCHHHHHHHHHcCC
Q 018446 201 EIARSYEKGGAACLSILTDEKYF------K----GSFENLEAVRSAG--V------KCPLLCKEFIVDAWQIYYARTKGA 262 (355)
Q Consensus 201 ~iA~~Ye~~GAaaISVLTD~~fF------~----GS~edL~~VR~a~--v------~lPVLrKDFIIdpyQI~eAr~~GA 262 (355)
+-|+...++||++|-|=..+.++ . ..+.-|..++++. . .+||+.-==|-++.+|..|.++||
T Consensus 296 ~~a~~l~~aGad~I~Vg~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAlalGA 375 (503)
T 1me8_A 296 EGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALAMGA 375 (503)
T ss_dssp HHHHHHHHHTCSEEEECSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCeEEecccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHHcCC
Confidence 46677778899999884444222 1 2234444554321 2 689999999999999999999999
Q ss_pred cchHHHHhcC
Q 018446 263 DAVLLIAAVL 272 (355)
Q Consensus 263 DAVLLIaaiL 272 (355)
|+|.+=-.++
T Consensus 376 ~~V~iG~~~~ 385 (503)
T 1me8_A 376 DFIMLGRYFA 385 (503)
T ss_dssp SEEEESHHHH
T ss_pred CEEEECchhh
Confidence 9998754443
No 306
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=76.27 E-value=3.9 Score=38.49 Aligned_cols=62 Identities=13% Similarity=0.245 Sum_probs=44.4
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCH----HHHHHHHhcCCCCCeeccc
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSF----ENLEAVRSAGVKCPLLCKE 246 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~----edL~~VR~a~v~lPVLrKD 246 (355)
++..||+=+--.| ..+..++++..++.||+++.|++ |-||..+. ++++.|.++ +++||+-=+
T Consensus 80 grvpViaGvg~~~--------t~~ai~la~~A~~~Gadavlv~~-P~y~~~s~~~l~~~f~~va~a-~~lPiilYn 145 (301)
T 1xky_A 80 KRVPVIAGTGSNN--------THASIDLTKKATEVGVDAVMLVA-PYYNKPSQEGMYQHFKAIAES-TPLPVMLYN 145 (301)
T ss_dssp TSSCEEEECCCSC--------HHHHHHHHHHHHHTTCSEEEEEC-CCSSCCCHHHHHHHHHHHHHT-CSSCEEEEE
T ss_pred CCceEEeCCCCCC--------HHHHHHHHHHHHhcCCCEEEEcC-CCCCCCCHHHHHHHHHHHHHh-cCCCEEEEe
Confidence 4567888772211 23577899999999999999998 67888775 455577775 788876443
No 307
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=76.20 E-value=2.8 Score=40.00 Aligned_cols=50 Identities=12% Similarity=0.298 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCcccc
Q 018446 274 DLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEV 325 (355)
Q Consensus 274 ~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~Tfev 325 (355)
.+-|+.|.++|+++||..+.|+||.+.++.+.+. ++++-|-.||..++.+
T Consensus 77 ~~GL~~L~~~~~e~Glp~~Tev~d~~~v~~l~~~--vd~lqIgA~~~~n~~L 126 (285)
T 3sz8_A 77 DEGLKIFAEVKARFGVPVITDVHEAEQAAPVAEI--ADVLQVPAFLARQTDL 126 (285)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHTT--CSEEEECGGGTTCHHH
T ss_pred HHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHh--CCEEEECccccCCHHH
Confidence 4578889999999999999999999999998875 8999999999988874
No 308
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=76.08 E-value=4.6 Score=39.21 Aligned_cols=135 Identities=15% Similarity=0.171 Sum_probs=82.5
Q ss_pred CCccHHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEE------Ee-ccCC-CCCCC-HHH
Q 018446 159 PARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLS------IL-TDEK-YFKGS-FEN 229 (355)
Q Consensus 159 p~rdF~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaIS------VL-TD~~-fF~GS-~ed 229 (355)
.++.+.+++.. ....|+.-.|..|-- -+.+--..+. ||+..-+ || -|.+ .|-|+ -+-
T Consensus 156 ~t~~~v~aa~g------~~~~i~~TRKT~Pgl-------R~l~kyAV~~-GGg~nHR~gL~d~vlikdnHi~~~G~i~~A 221 (320)
T 3paj_A 156 ATARYVQELKG------TQCRLLDTRKTIPGL-------RSALKYAVAC-GGGYNHRIGVFDAYLIKENHIIACGGIRQA 221 (320)
T ss_dssp HHHHHHHHHTT------SSCEEECCSCCCTTC-------HHHHHHHHHH-TTCBCCCSSSSSCEEECHHHHHHHTSHHHH
T ss_pred HHHHHHHHhCC------CCeEEEeecCCCccc-------hHHHhhhHHh-cCccceecccchhhccHHHHHHHhCCHHHH
Confidence 45667777753 347888888888842 1222222333 4543211 11 1111 23345 355
Q ss_pred HHHHHhcCCCCC--eeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeC---CHHHHHHH
Q 018446 230 LEAVRSAGVKCP--LLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRV 304 (355)
Q Consensus 230 L~~VR~a~v~lP--VLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH---~~eELerA 304 (355)
++.+|+.....| |++.++ -|+.+|..+|||.|+| .-.+.++|++..+. ++=.+.+|+. |++.+...
T Consensus 222 v~~ar~~~p~~kIeVEVdtl----dea~eAl~aGaD~I~L--Dn~~~~~l~~av~~---l~~~v~ieaSGGIt~~~I~~~ 292 (320)
T 3paj_A 222 ISTAKQLNPGKPVEVETETL----AELEEAISAGADIIML--DNFSLEMMREAVKI---NAGRAALENSGNITLDNLKEC 292 (320)
T ss_dssp HHHHHHHSTTSCEEEEESSH----HHHHHHHHTTCSEEEE--ESCCHHHHHHHHHH---HTTSSEEEEESSCCHHHHHHH
T ss_pred HHHHHHhCCCCeEEEEECCH----HHHHHHHHcCCCEEEE--CCCCHHHHHHHHHH---hCCCCeEEEECCCCHHHHHHH
Confidence 566676433344 556654 5888999999999988 44667677666654 3347899995 78888887
Q ss_pred hccCCCeEEEeeC
Q 018446 305 LGIEGIELIGINN 317 (355)
Q Consensus 305 l~l~ga~iIGINN 317 (355)
... |+++|++-.
T Consensus 293 a~t-GVD~isvGa 304 (320)
T 3paj_A 293 AET-GVDYISVGA 304 (320)
T ss_dssp HTT-TCSEEECTH
T ss_pred HHc-CCCEEEECc
Confidence 775 999999843
No 309
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=75.87 E-value=5 Score=39.75 Aligned_cols=93 Identities=14% Similarity=0.118 Sum_probs=71.6
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~ 276 (355)
...+++..++.|...| |+.+-.++++.+..+|+. +++||..-+-+.+.++..+....| +|.|.+=+.-+ +-.+
T Consensus 256 A~~~~~~L~~~~i~~i----EeP~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~ 330 (440)
T 3t6c_A 256 AIHMAKALEPYQLFFL----EDPVAPENTEWLKMLRQQ-SSTPIAMGELFVNVNEWKPLIDNKLIDYIRCHISSIGGITP 330 (440)
T ss_dssp HHHHHHHTGGGCCSEE----ECSSCGGGGGGHHHHHHH-CCSCEEECTTCCSHHHHHHHHHTTCCSEECCCGGGGTSHHH
T ss_pred HHHHHHHhhhcCCCEE----ECCCChhhHHHHHHHHhh-cCCCEEeCcccCCHHHHHHHHHcCCccceeechhhhCCHHH
Confidence 3456777777776555 444556788999999986 899999999999999999998877 68877744443 4567
Q ss_pred HHHHHHHHHHcCCcEEEEeCCH
Q 018446 277 IRYMTKICKLLGLTALVEVHDE 298 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH~~ 298 (355)
...+..+|+..|+.+. +|+.
T Consensus 331 ~~~ia~~A~~~gi~~~--~h~~ 350 (440)
T 3t6c_A 331 AKKIAIYSELNGVRTA--WHSP 350 (440)
T ss_dssp HHHHHHHHHHTTCEEC--CCCS
T ss_pred HHHHHHHHHHcCCEEE--eccC
Confidence 7889999999999854 5554
No 310
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=75.85 E-value=3.8 Score=38.39 Aligned_cols=62 Identities=18% Similarity=0.264 Sum_probs=44.6
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCH----HHHHHHHhcCCCCCeeccc
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSF----ENLEAVRSAGVKCPLLCKE 246 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~----edL~~VR~a~v~lPVLrKD 246 (355)
++..||+=+-- .| ..+..++++..++.||+++.|++ |-||..+. ++++.|.++ +++||+-=+
T Consensus 75 grvpviaGvg~--~~------t~~ai~la~~a~~~Gadavlv~~-P~y~~~~~~~l~~~f~~va~a-~~lPiilYn 140 (297)
T 3flu_A 75 KRVPVIAGTGA--NN------TVEAIALSQAAEKAGADYTLSVV-PYYNKPSQEGIYQHFKTIAEA-TSIPMIIYN 140 (297)
T ss_dssp TSSCEEEECCC--SS------HHHHHHHHHHHHHTTCSEEEEEC-CCSSCCCHHHHHHHHHHHHHH-CCSCEEEEE
T ss_pred CCCcEEEeCCC--cC------HHHHHHHHHHHHHcCCCEEEECC-CCCCCCCHHHHHHHHHHHHHh-CCCCEEEEE
Confidence 55678886622 21 23678999999999999999997 66787774 456677765 688876443
No 311
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=75.83 E-value=26 Score=33.50 Aligned_cols=115 Identities=19% Similarity=0.178 Sum_probs=77.8
Q ss_pred CCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhc-----
Q 018446 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV----- 271 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaai----- 271 (355)
-||+..|..-+++||+.|-|---+.--.=..+|+..+|+. +..|+ .=.--..+-.+.-|...--|.|.|..--
T Consensus 53 PDpv~aA~~ae~aGAdGITvHlReDrRHI~d~Dv~~L~~~-i~t~l-NlEma~t~emi~ial~~kP~~vtLVPEkreE~T 130 (278)
T 3gk0_A 53 PDPVRAALAAEDAGADAITLHLREDRRHIVDADVRTLRPR-VKTRM-NLECAVTPEMLDIACEIRPHDACLVPEKRSELT 130 (278)
T ss_dssp SCHHHHHHHHHHTTCSEEEEECCTTCSSSCHHHHHHHHHH-CSSCE-EEEECSSHHHHHHHHHHCCSEEEECCCSGGGBC
T ss_pred CCHHHHHHHHHHcCCCEEEeccCCCcccCCHHHHHHHHHH-cCCCE-EeecCCCHHHHHHHHHcCCCEEEECCCCCCCcC
Confidence 4899999999999999999965555566678999999985 56553 2222346667777888888887775432
Q ss_pred -------C-CHHHHHHHHHHHHHcCCcE--EEEeCCHHHHHHHhccCCCeEEEe
Q 018446 272 -------L-PDLDIRYMTKICKLLGLTA--LVEVHDEREMDRVLGIEGIELIGI 315 (355)
Q Consensus 272 -------L-~~~~L~~L~~~A~~LGLea--LVEVH~~eELerAl~l~ga~iIGI 315 (355)
. ..+.|+..++..+..|..+ +|+ -+.+.++.|..+ ||+.|=+
T Consensus 131 TegGlDv~~~~~~L~~~i~~L~~~GIrVSLFID-pd~~qI~aA~~~-GAd~IEL 182 (278)
T 3gk0_A 131 TEGGLDVVGHFDAVRAACKQLADAGVRVSLFID-PDEAQIRAAHET-GAPVIEL 182 (278)
T ss_dssp SSSSBCTTTTHHHHHHHHHHHHHTTCEEEEEEC-SCHHHHHHHHHH-TCSEEEE
T ss_pred CCcchhhhccHHHHHHHHHHHHHCCCEEEEEeC-CCHHHHHHHHHh-CcCEEEE
Confidence 1 2345777777777777733 332 455566666665 6666554
No 312
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=75.72 E-value=17 Score=32.44 Aligned_cols=128 Identities=9% Similarity=0.012 Sum_probs=74.3
Q ss_pred ccHHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCC
Q 018446 161 RDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKC 240 (355)
Q Consensus 161 rdF~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~l 240 (355)
..|.+.|.... ++..+..|+|- |. ....+++.+.+ .+. ..-.||+ |..+|+...++
T Consensus 91 ptL~evL~~~~---~~~~l~iEiK~--~~--------~~~~v~~~l~~---------~~~-vii~Sf~-l~~~~~~~p~~ 146 (234)
T 1o1z_A 91 TTLKEVFENVS---DDKIINIEIKE--RE--------AADAVLEISKK---------RKN-LIFSSFD-LDLLDEKFKGT 146 (234)
T ss_dssp CBHHHHHHHSC---TTSEEEEEECC--GG--------GHHHHHHHHTT---------CCS-EEEEESC-HHHHHHHCTTS
T ss_pred CCHHHHHHhcc---cCCeEEEEeCC--cc--------HHHHHHHHHhc---------cCC-EEEEchh-HHHHHhhCCCC
Confidence 35666665542 34679999992 31 13456666655 121 1223444 88887654566
Q ss_pred Ce--ecccccc-CHHHHHHHHHcCC---cchHHHHhcCCHHHHHHHHHHHHHcCCcEEEE-eCCHHHHHHHhccCCCeEE
Q 018446 241 PL--LCKEFIV-DAWQIYYARTKGA---DAVLLIAAVLPDLDIRYMTKICKLLGLTALVE-VHDEREMDRVLGIEGIELI 313 (355)
Q Consensus 241 PV--LrKDFII-dpyQI~eAr~~GA---DAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVE-VH~~eELerAl~l~ga~iI 313 (355)
|+ |....-. ++.+. ++..|+ +++-.-...++......+++.+++.|+.+.+= |.+++++++.+.. ++.|
T Consensus 147 ~~~~l~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~g~~~~~~~v~~~~~~G~~v~~wTvn~~~~~~~l~~~--vdgI 222 (234)
T 1o1z_A 147 KYGYLIDEENYGSIENF--VERVEKERPYSLHVPYQAFELEYAVEVLRSFRKKGIVIFVWTLNDPEIYRKIRRE--IDGV 222 (234)
T ss_dssp CEEEECCTTTTCSHHHH--HHHHHHHCCSEEEEEGGGGGSHHHHHHHHHHHHTTCEEEEESCCCHHHHHHHGGG--CSEE
T ss_pred cEEEEeccccccCHHHH--HHHcCCCCCCEEEeCHHHhcCCccHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHh--CCEE
Confidence 63 3333222 33222 444555 77655444441112267899999999998874 7899999998874 6555
Q ss_pred Eee
Q 018446 314 GIN 316 (355)
Q Consensus 314 GIN 316 (355)
--|
T Consensus 223 iTD 225 (234)
T 1o1z_A 223 ITD 225 (234)
T ss_dssp EES
T ss_pred EcC
Confidence 433
No 313
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=75.67 E-value=4.3 Score=38.90 Aligned_cols=62 Identities=24% Similarity=0.284 Sum_probs=44.3
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCH----HHHHHHHhcCCCCCeeccc
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSF----ENLEAVRSAGVKCPLLCKE 246 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~----edL~~VR~a~v~lPVLrKD 246 (355)
++..||+=+--.| ..+..++++..++.||+++.|++ |-||.-+. ++++.|.++ +++||+-=+
T Consensus 102 grvpViaGvg~~s--------t~eai~la~~A~~~Gadavlv~~-P~Y~~~s~~~l~~~f~~VA~a-~~lPiilYn 167 (332)
T 2r8w_A 102 GRRTLMAGIGALR--------TDEAVALAKDAEAAGADALLLAP-VSYTPLTQEEAYHHFAAVAGA-TALPLAIYN 167 (332)
T ss_dssp TSSEEEEEECCSS--------HHHHHHHHHHHHHHTCSEEEECC-CCSSCCCHHHHHHHHHHHHHH-CSSCEEEEC
T ss_pred CCCcEEEecCCCC--------HHHHHHHHHHHHhcCCCEEEECC-CCCCCCCHHHHHHHHHHHHHh-cCCCEEEEe
Confidence 5677998773221 23677899999999999999997 66777774 455577665 678876443
No 314
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=75.39 E-value=3.6 Score=39.57 Aligned_cols=93 Identities=16% Similarity=0.134 Sum_probs=73.2
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHc-CCcchHHHHhcCC-HHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTK-GADAVLLIAAVLP-DLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~-GADAVLLIaaiL~-~~~ 276 (355)
...+++..++.|...| |+.+-.++++.+..+|+. +++||..-+-+.++++..+.... ++|.|.+=..-++ -.+
T Consensus 210 A~~~~~~l~~~~i~~i----EqP~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~ 284 (374)
T 3sjn_A 210 SAMMAKRLEEFNLNWI----EEPVLADSLISYEKLSRQ-VSQKIAGGESLTTRYEFQEFITKSNADIVQPDITRCGGITE 284 (374)
T ss_dssp HHHHHHHSGGGCCSEE----ECSSCTTCHHHHHHHHHH-CSSEEEECTTCCHHHHHHHHHHHHCCSEECCBTTTSSHHHH
T ss_pred HHHHHHHhhhcCceEE----ECCCCcccHHHHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHH
Confidence 3457788888786655 455667899999999986 89999999999999999888776 5788777555554 456
Q ss_pred HHHHHHHHHHcCCcEEEEeCCH
Q 018446 277 IRYMTKICKLLGLTALVEVHDE 298 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH~~ 298 (355)
...+..+|+..|+.+. +|+.
T Consensus 285 ~~~ia~~A~~~gi~~~--~h~~ 304 (374)
T 3sjn_A 285 MKKIYDIAQMNGTQLI--PHGF 304 (374)
T ss_dssp HHHHHHHHHHHTCEEC--CBCC
T ss_pred HHHHHHHHHHcCCEEE--ecCC
Confidence 7788999999999865 4765
No 315
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=75.36 E-value=6.2 Score=37.39 Aligned_cols=39 Identities=26% Similarity=0.184 Sum_probs=31.2
Q ss_pred HHHHHHHHcCC--cEEEEeCCHHHHHHHhccCCCeEEEeeCC
Q 018446 279 YMTKICKLLGL--TALVEVHDEREMDRVLGIEGIELIGINNR 318 (355)
Q Consensus 279 ~L~~~A~~LGL--eaLVEVH~~eELerAl~l~ga~iIGINNR 318 (355)
.-++.+++.+- ...|||+|.+|++.|+.+ |+++|...|-
T Consensus 183 ~av~~ar~~~~~~~I~Vev~t~eea~eal~a-GaD~I~LDn~ 223 (284)
T 1qpo_A 183 DALRAVRNAAPDLPCEVEVDSLEQLDAVLPE-KPELILLDNF 223 (284)
T ss_dssp HHHHHHHHHCTTSCEEEEESSHHHHHHHGGG-CCSEEEEETC
T ss_pred HHHHHHHHhCCCCCEEEEeCCHHHHHHHHHc-CCCEEEECCC
Confidence 33445555433 789999999999999997 9999999994
No 316
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=75.35 E-value=4.4 Score=36.08 Aligned_cols=115 Identities=11% Similarity=0.053 Sum_probs=63.8
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHH-hcCCCCCeeccccc-cCHHHHHHHHHcCCcchHHHHhcCC---
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVR-SAGVKCPLLCKEFI-VDAWQIYYARTKGADAVLLIAAVLP--- 273 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR-~a~v~lPVLrKDFI-IdpyQI~eAr~~GADAVLLIaaiL~--- 273 (355)
+.++.+..++.|-.+.++.+. |++-.+.++..-. ..+..-|-.++..+ .-.-.|..|..+||+.|.+.....+
T Consensus 53 ~~~~~~~l~~~gl~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~G~~~~~~ 130 (290)
T 3tva_A 53 AQAFRAKCDAAGIQVTVIFGG--FDGESYADIPTTARTVGLVPLETRASRVAEMKEISDFASWVGCPAIGLHIGFVPESS 130 (290)
T ss_dssp HHHHHHHHHHTTCEEEEEECC--CTTCCCSSHHHHHHHSSSCSTTTHHHHHHHHHHHHHHHHHHTCSEEEECCCCCCCTT
T ss_pred HHHHHHHHHHcCCEEEEEeec--cCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCcccc
Confidence 667888999999988887552 1111111111000 00000010111000 0122466688888888876544332
Q ss_pred -------HHHHHHHHHHHHHcCCcEEEEeCC--HHHHHHHhccCCCeEEEe
Q 018446 274 -------DLDIRYMTKICKLLGLTALVEVHD--EREMDRVLGIEGIELIGI 315 (355)
Q Consensus 274 -------~~~L~~L~~~A~~LGLeaLVEVH~--~eELerAl~l~ga~iIGI 315 (355)
-+.|.++.++|.+.|+...+|-|. .+++.+.++.-+.+-+|+
T Consensus 131 ~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~l~~~~~~~~~g~ 181 (290)
T 3tva_A 131 SPDYSELVRVTQDLLTHAANHGQAVHLETGQESADHLLEFIEDVNRPNLGI 181 (290)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTTCEEEEECCSSCHHHHHHHHHHHCCTTEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHHhcCCCCEEE
Confidence 235788899999999999999874 677777665323334554
No 317
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=75.31 E-value=4.2 Score=37.43 Aligned_cols=78 Identities=17% Similarity=0.172 Sum_probs=55.3
Q ss_pred CCHHHHHHHHHHcCceEEEEe----cc--CCCCCCCHHHHHHHHhcC-CCCCeeccccccCHHHHHHHHHcCCcchHHHH
Q 018446 197 FDPVEIARSYEKGGAACLSIL----TD--EKYFKGSFENLEAVRSAG-VKCPLLCKEFIVDAWQIYYARTKGADAVLLIA 269 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVL----TD--~~fF~GS~edL~~VR~a~-v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIa 269 (355)
.++.++.++. +.||+.|.|- |. +.+..-+++.+..+++.. +++||+.= -.|++-.+.+.+.+|||+|.++-
T Consensus 143 ht~~Ea~~A~-~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAi-GGI~~~ni~~~~~aGa~gvav~s 220 (243)
T 3o63_A 143 HDPDQVAAAA-AGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAI-GGINAQRLPAVLDAGARRIVVVR 220 (243)
T ss_dssp CSHHHHHHHH-HSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEE-SSCCTTTHHHHHHTTCCCEEESH
T ss_pred CCHHHHHHHh-hCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEe-cCCCHHHHHHHHHcCCCEEEEeH
Confidence 4677755554 4799999983 22 122234688899988641 48998775 55699999999999999999999
Q ss_pred hcCCHHH
Q 018446 270 AVLPDLD 276 (355)
Q Consensus 270 aiL~~~~ 276 (355)
+++..++
T Consensus 221 ai~~a~d 227 (243)
T 3o63_A 221 AITSADD 227 (243)
T ss_dssp HHHTCSS
T ss_pred HHhCCCC
Confidence 8886433
No 318
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=75.24 E-value=14 Score=35.05 Aligned_cols=119 Identities=19% Similarity=0.237 Sum_probs=70.2
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCC-CCCC----HHHHHHHHh----cCCCCCeecc-----------cccc-CH-----
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKY-FKGS----FENLEAVRS----AGVKCPLLCK-----------EFIV-DA----- 251 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~f-F~GS----~edL~~VR~----a~v~lPVLrK-----------DFII-dp----- 251 (355)
++.+..+...+.|..+|-+-...-+ +.-+ .+++..+|+ .+..+..+.- +|.- |+
T Consensus 34 ~~~e~l~~aa~~G~~~VEl~~~~~~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~~~~~~~~~p~~~~g~l~~~d~~~r~~ 113 (386)
T 1muw_A 34 DPVETVQRLAELGAHGVTFHDDDLIPFGSSDTERESHIKRFRQALDATGMTVPMATTNLFTHPVFKDGGFTANDRDVRRY 113 (386)
T ss_dssp CHHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCCEEECCCSSSGGGTTCSTTCSSHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEeeCCCCCcccCcccccHHHHHHHHHHHHHhCCeEEEEecccccccccccCCCCCCCHHHHHH
Confidence 5777777777778888877653211 1111 234444432 2444444421 2221 22
Q ss_pred ------HHHHHHHHcCCcchHHHHhcC--------C--------HHHHHHHHHHHHHcC--CcEEEEeC-----------
Q 018446 252 ------WQIYYARTKGADAVLLIAAVL--------P--------DLDIRYMTKICKLLG--LTALVEVH----------- 296 (355)
Q Consensus 252 ------yQI~eAr~~GADAVLLIaaiL--------~--------~~~L~~L~~~A~~LG--LeaLVEVH----------- 296 (355)
-.|..|+.+||+.|.+-.... + -+.|.++.++|.+.| +...+|-|
T Consensus 114 ~i~~~~~~i~~A~~LGa~~vvv~~g~~~~~~~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v~l~lE~~~~e~~~~~~~~ 193 (386)
T 1muw_A 114 ALRKTIRNIDLAVELGAKTYVAWGGREGAESGAAKDVRVALDRMKEAFDLLGEYVTSQGYDIRFAIEPKPNEPRGDILLP 193 (386)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEECCTTCEESSTTSCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEECCCSSSSSSEESSC
T ss_pred HHHHHHHHHHHHHHhCCCEEEECCCCCcccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeeCCCCCcccccCC
Confidence 346678899999877643322 1 135678889999999 99999988
Q ss_pred CHHHHHHHhccCCCe-EEEee
Q 018446 297 DEREMDRVLGIEGIE-LIGIN 316 (355)
Q Consensus 297 ~~eELerAl~l~ga~-iIGIN 316 (355)
|.+++.+.++.-+.+ -+|++
T Consensus 194 t~~~~~~li~~v~~pn~vgl~ 214 (386)
T 1muw_A 194 TVGHALAFIERLERPELYGVN 214 (386)
T ss_dssp SHHHHHHHHTTSSSGGGEEEC
T ss_pred CHHHHHHHHHHhCCccceEEE
Confidence 567777776532444 36663
No 319
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=75.22 E-value=3.5 Score=38.39 Aligned_cols=62 Identities=19% Similarity=0.248 Sum_probs=44.3
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCH----HHHHHHHhcCCCCCeeccc
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSF----ENLEAVRSAGVKCPLLCKE 246 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~----edL~~VR~a~v~lPVLrKD 246 (355)
++..||+=+-- .| ..+..++++..++.||+++.|++ |-||..+. ++++.|.++ +++||+-=+
T Consensus 68 gr~pviaGvg~--~~------t~~ai~la~~a~~~Gadavlv~~-P~y~~~s~~~l~~~f~~ia~a-~~lPiilYn 133 (289)
T 2yxg_A 68 GRVQVIAGAGS--NC------TEEAIELSVFAEDVGADAVLSIT-PYYNKPTQEGLRKHFGKVAES-INLPIVLYN 133 (289)
T ss_dssp TSSEEEEECCC--SS------HHHHHHHHHHHHHHTCSEEEEEC-CCSSCCCHHHHHHHHHHHHHH-CSSCEEEEE
T ss_pred CCCcEEEeCCC--CC------HHHHHHHHHHHHhcCCCEEEECC-CCCCCCCHHHHHHHHHHHHHh-cCCCEEEEe
Confidence 45679987722 11 23577899999999999999997 67787775 455577765 678875433
No 320
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=74.93 E-value=1.8 Score=42.15 Aligned_cols=77 Identities=19% Similarity=0.091 Sum_probs=57.9
Q ss_pred HHHHHHHHHHcCceEEEEeccC--CCCCC-CHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcCCH
Q 018446 199 PVEIARSYEKGGAACLSILTDE--KYFKG-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD 274 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~--~fF~G-S~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL~~ 274 (355)
..++|+..++.|++.|.|-.-. ..+.| ..+.+..+|++ +++||+.--=| ++.+..++...| ||+|.+-=++|.+
T Consensus 257 ~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~-~~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~l~~ 334 (377)
T 2r14_A 257 AFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQR-FKGGLIYCGNY-DAGRAQARLDDNTADAVAFGRPFIAN 334 (377)
T ss_dssp HHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHH-CCSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHH-CCCCEEEECCC-CHHHHHHHHHCCCceEEeecHHHHhC
Confidence 5678999999999999996421 11112 46678889986 89999887666 799999999998 9999887667655
Q ss_pred HHH
Q 018446 275 LDI 277 (355)
Q Consensus 275 ~~L 277 (355)
-++
T Consensus 335 P~l 337 (377)
T 2r14_A 335 PDL 337 (377)
T ss_dssp TTH
T ss_pred chH
Confidence 443
No 321
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=74.70 E-value=3.2 Score=40.89 Aligned_cols=120 Identities=11% Similarity=0.123 Sum_probs=84.5
Q ss_pred HHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCe
Q 018446 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (355)
Q Consensus 163 F~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPV 242 (355)
...++++... ....|..+. ..| +.. -+...+++.+++.|...| |+.+-..+++.+..+|+. +++||
T Consensus 216 ~v~avR~a~G--~d~~l~vDa-----N~~-~~~-~~A~~~~~~L~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPI 281 (425)
T 3vcn_A 216 LFERAREVLG--WDVHLLHDV-----HHR-LTP-IEAARLGKDLEPYRLFWL----EDSVPAENQAGFRLIRQH-TTTPL 281 (425)
T ss_dssp HHHHHHHHHC--SSSEEEEEC-----TTC-CCH-HHHHHHHHHHGGGCCSEE----ECCSCCSSTTHHHHHHHH-CCSCE
T ss_pred HHHHHHHHcC--CCCEEEEEC-----CCC-CCH-HHHHHHHHHHHhcCCCEE----ECCCChhhHHHHHHHHhc-CCCCE
Confidence 3556666531 234566653 111 211 134467788888886655 445556789999999986 89999
Q ss_pred eccccccCHHHHHHHHHcC-CcchHHHHhcCC-HHHHHHHHHHHHHcCCcEEEEeCCH
Q 018446 243 LCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVEVHDE 298 (355)
Q Consensus 243 LrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL~-~~~L~~L~~~A~~LGLeaLVEVH~~ 298 (355)
..-+-+.++++..++...| +|.|.+=+.-++ -.+...+..+|+..|+.+ -+|+.
T Consensus 282 a~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~--~~h~~ 337 (425)
T 3vcn_A 282 AVGEIFAHVWDAKQLIEEQLIDYLRATVLHAGGITNLKKIAAFADLHHVKT--GCHGA 337 (425)
T ss_dssp EECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHGGGTCEE--CCCCC
T ss_pred EeCCCcCCHHHHHHHHHcCCCCeEecChhhcCCHHHHHHHHHHHHHcCCEE--eeccC
Confidence 9999999999999998887 788777555554 456778899999999985 45654
No 322
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=74.69 E-value=9.1 Score=33.45 Aligned_cols=64 Identities=16% Similarity=0.106 Sum_probs=41.2
Q ss_pred HHHHHHHcCCcchHHHH--hc-CC--------HHHHHHHHHHHHHcCCcEEEEeC--------------CHHHHHHHhcc
Q 018446 253 QIYYARTKGADAVLLIA--AV-LP--------DLDIRYMTKICKLLGLTALVEVH--------------DEREMDRVLGI 307 (355)
Q Consensus 253 QI~eAr~~GADAVLLIa--ai-L~--------~~~L~~L~~~A~~LGLeaLVEVH--------------~~eELerAl~l 307 (355)
.|..|..+||..|..-. .- .+ -+.|..+.++|.+.|+...+|-| |.+++.+.++.
T Consensus 89 ~i~~A~~lG~~~v~~~~~p~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~~~~~~~~~l~~~ 168 (281)
T 3u0h_A 89 RARLCARLGARSVTAFLWPSMDEEPVRYISQLARRIRQVAVELLPLGMRVGLEYVGPHHLRHRRYPFVQSLADLKTFWEA 168 (281)
T ss_dssp HHHHHHHTTCCEEEEECCSEESSCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCGGGCCSSEECCCSHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeecCCCCCcchhhHHHHHHHHHHHHHHHHHcCCEEEEEeccccccccccccccCCHHHHHHHHHH
Confidence 46668888888766211 00 00 14577888999999999999977 56777776653
Q ss_pred CCCeEEEee
Q 018446 308 EGIELIGIN 316 (355)
Q Consensus 308 ~ga~iIGIN 316 (355)
-+.+-+|++
T Consensus 169 v~~~~vg~~ 177 (281)
T 3u0h_A 169 IGAPNVGAL 177 (281)
T ss_dssp HCCTTEEEE
T ss_pred cCCCCeeEE
Confidence 233345543
No 323
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=74.66 E-value=3.9 Score=38.02 Aligned_cols=44 Identities=27% Similarity=0.400 Sum_probs=33.8
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCC-CCH----HHHHHHHhcCCCCCee
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFK-GSF----ENLEAVRSAGVKCPLL 243 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~-GS~----edL~~VR~a~v~lPVL 243 (355)
+..++++..++.||+++.|++ |-||. .+. ++++.|.++ +++||+
T Consensus 78 ~ai~la~~A~~~Gadavlv~~-P~y~~~~s~~~l~~~f~~va~a-~~lPii 126 (286)
T 2r91_A 78 EAIALAKYAESRGAEAVASLP-PYYFPRLSERQIAKYFRDLCSA-VSIPVF 126 (286)
T ss_dssp HHHHHHHHHHHTTCSEEEECC-SCSSTTCCHHHHHHHHHHHHHH-CSSCEE
T ss_pred HHHHHHHHHHhcCCCEEEEcC-CcCCCCCCHHHHHHHHHHHHHh-cCCCEE
Confidence 677899999999999999997 66777 564 455577665 677764
No 324
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=74.62 E-value=1.9 Score=39.72 Aligned_cols=42 Identities=21% Similarity=0.195 Sum_probs=34.3
Q ss_pred HHHHHHHhcCCCCCeeccccccC-HHHHHHHHHcCCcchHHHHhcC
Q 018446 228 ENLEAVRSAGVKCPLLCKEFIVD-AWQIYYARTKGADAVLLIAAVL 272 (355)
Q Consensus 228 edL~~VR~a~v~lPVLrKDFIId-pyQI~eAr~~GADAVLLIaaiL 272 (355)
+.++.+|+. +++||+. +|.|+ +-|+.+ ...|||+|..=-++.
T Consensus 196 ~~v~~vr~~-~~~pv~v-G~GI~t~e~~~~-~~~gADgvIVGSai~ 238 (262)
T 2ekc_A 196 KKVEEYREL-CDKPVVV-GFGVSKKEHARE-IGSFADGVVVGSALV 238 (262)
T ss_dssp HHHHHHHHH-CCSCEEE-ESSCCSHHHHHH-HHTTSSEEEECHHHH
T ss_pred HHHHHHHhh-cCCCEEE-eCCCCCHHHHHH-HHcCCCEEEECHHHH
Confidence 678889986 7999877 99998 899988 788999998744443
No 325
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=74.45 E-value=3.2 Score=40.42 Aligned_cols=73 Identities=21% Similarity=0.121 Sum_probs=57.2
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcCCHHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPDLDI 277 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL~~~~L 277 (355)
..++|+..++.|++.|.|-.-. + |. +.+..+|++ +++||+.--=| ++.+..++...| ||+|-+-=.+|.+-++
T Consensus 252 ~~~la~~l~~~Gvd~i~v~~~~--~-~~-~~~~~ik~~-~~iPvi~~Ggi-t~e~a~~~l~~G~aD~V~iGR~~ladPdl 325 (361)
T 3gka_A 252 FGHVARELGRRRIAFLFARESF--G-GD-AIGQQLKAA-FGGPFIVNENF-TLDSAQAALDAGQADAVAWGKLFIANPDL 325 (361)
T ss_dssp HHHHHHHHHHTTCSEEEEECCC--S-TT-CCHHHHHHH-HCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTH
T ss_pred HHHHHHHHHHcCCCEEEECCCC--C-CH-HHHHHHHHH-cCCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHhCcHH
Confidence 5679999999999999986533 2 22 567889986 88998776656 999999999998 9999886666655444
No 326
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=74.38 E-value=2.8 Score=40.11 Aligned_cols=50 Identities=20% Similarity=0.408 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCcccc
Q 018446 274 DLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEV 325 (355)
Q Consensus 274 ~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~Tfev 325 (355)
.+-|+.|.++|+++||..+.|+||.+.++.+.+. ++++-|-.++..++..
T Consensus 74 ~~GL~~L~~~~~e~Glp~~tev~d~~~v~~l~~~--vd~lkIgA~~~~n~~L 123 (288)
T 3tml_A 74 DEGLRILSEVKRQLGLPVLTDVHSIDEIEQVASV--VDVLQTPAFLCRQTDF 123 (288)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH--CSEEEECGGGTTCHHH
T ss_pred HHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHh--CCEEEECcccccCHHH
Confidence 4578889999999999999999999999998875 8999999999988884
No 327
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=74.34 E-value=16 Score=33.71 Aligned_cols=98 Identities=18% Similarity=0.113 Sum_probs=65.0
Q ss_pred eEEeEeeecCCCCCCCCCCCCHHHH---HHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCC-Ceecccccc--CH
Q 018446 178 ALIAEVKKASPSRGILREDFDPVEI---ARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKC-PLLCKEFIV--DA 251 (355)
Q Consensus 178 aVIAEvKRaSPSkG~I~~~~Dp~~i---A~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~l-PVLrKDFII--dp 251 (355)
.+|.|.- |-...+....++..+ ++.-.+.||+-|-+=| .|+.++++.+++. +.+ ||..-==|- +.
T Consensus 140 ~vIi~~~---~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt~~-----~~~~e~~~~~~~~-~~~~pV~asGGi~~~~~ 210 (263)
T 1w8s_A 140 PLVVESF---PRGGKVVNETAPEIVAYAARIALELGADAMKIKY-----TGDPKTFSWAVKV-AGKVPVLMSGGPKTKTE 210 (263)
T ss_dssp CEEEEEC---CCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEEC-----CSSHHHHHHHHHH-TTTSCEEEECCSCCSSH
T ss_pred eEEEEee---CCCCccccCCCHHHHHHHHHHHHHcCCCEEEEcC-----CCCHHHHHHHHHh-CCCCeEEEEeCCCCCCH
Confidence 4677743 221123333456555 4556678999877663 4799999999986 676 987654332 22
Q ss_pred H----HHHHHHHcCCcchHHHHhcCCHHHHHHHHHHH
Q 018446 252 W----QIYYARTKGADAVLLIAAVLPDLDIRYMTKIC 284 (355)
Q Consensus 252 y----QI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A 284 (355)
- .+.++..+|||++...-+++..++-..+++..
T Consensus 211 ~~~l~~i~~~~~aGA~GvsvgraI~~~~dp~~~~~~l 247 (263)
T 1w8s_A 211 EDFLKQVEGVLEAGALGIAVGRNVWQRRDALKFARAL 247 (263)
T ss_dssp HHHHHHHHHHHHTTCCEEEESHHHHTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEEehhhcCCcCHHHHHHHH
Confidence 2 56677789999999999999876665555433
No 328
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=74.05 E-value=4.5 Score=37.75 Aligned_cols=62 Identities=18% Similarity=0.252 Sum_probs=44.2
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHH----HHHHHHhcCCCCCeeccc
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFE----NLEAVRSAGVKCPLLCKE 246 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~e----dL~~VR~a~v~lPVLrKD 246 (355)
++..||+=+--.| ..+..++++..++.||+|+.|++ |-||..+.+ +++.|.++ +++||+-=+
T Consensus 68 grvpviaGvg~~~--------t~~ai~la~~A~~~Gadavlv~~-P~y~~~s~~~l~~~f~~va~a-~~lPiilYn 133 (294)
T 2ehh_A 68 GRIKVIAGTGGNA--------THEAVHLTAHAKEVGADGALVVV-PYYNKPTQRGLYEHFKTVAQE-VDIPIIIYN 133 (294)
T ss_dssp TSSEEEEECCCSC--------HHHHHHHHHHHHHTTCSEEEEEC-CCSSCCCHHHHHHHHHHHHHH-CCSCEEEEE
T ss_pred CCCcEEEecCCCC--------HHHHHHHHHHHHhcCCCEEEECC-CCCCCCCHHHHHHHHHHHHHh-cCCCEEEEe
Confidence 4567998772211 23577899999999999999997 678877754 45577665 678875433
No 329
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=73.99 E-value=4 Score=38.09 Aligned_cols=45 Identities=16% Similarity=0.115 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCC-CCH----HHHHHHHhcCCCCCeec
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFK-GSF----ENLEAVRSAGVKCPLLC 244 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~-GS~----edL~~VR~a~v~lPVLr 244 (355)
+..++++..++.||+++.|++ |-||. .+. ++++.|.++ +++||+-
T Consensus 79 ~ai~la~~A~~~Gadavlv~~-P~y~~~~s~~~l~~~f~~va~a-~~lPiil 128 (288)
T 2nuw_A 79 DVMELVKFSNEMDILGVSSHS-PYYFPRLPEKFLAKYYEEIARI-SSHSLYI 128 (288)
T ss_dssp HHHHHHHHHHTSCCSEEEECC-CCSSCSCCHHHHHHHHHHHHHH-CCSCEEE
T ss_pred HHHHHHHHHHhcCCCEEEEcC-CcCCCCCCHHHHHHHHHHHHHh-cCCCEEE
Confidence 577899999999999999997 66777 564 455577765 6788654
No 330
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=73.95 E-value=3.9 Score=38.53 Aligned_cols=87 Identities=16% Similarity=0.168 Sum_probs=65.1
Q ss_pred ceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEe-ccCCCCCCCHHHHHHHHhcCC--CCCeeccccccCHHH
Q 018446 177 PALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSIL-TDEKYFKGSFENLEAVRSAGV--KCPLLCKEFIVDAWQ 253 (355)
Q Consensus 177 ~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVL-TD~~fF~GS~edL~~VR~a~v--~lPVLrKDFIIdpyQ 253 (355)
..+++|+ .|..++.++. +.||..|.|. .+-+-|.=+++....+++. + ++|+++-==|-.+-+
T Consensus 170 l~~lvev-------------h~~eEl~~A~-~~ga~iIGinnr~l~t~~~dl~~~~~L~~~-ip~~~~vIaesGI~t~ed 234 (272)
T 3tsm_A 170 MDALIEV-------------HDEAEMERAL-KLSSRLLGVNNRNLRSFEVNLAVSERLAKM-APSDRLLVGESGIFTHED 234 (272)
T ss_dssp CEEEEEE-------------CSHHHHHHHT-TSCCSEEEEECBCTTTCCBCTHHHHHHHHH-SCTTSEEEEESSCCSHHH
T ss_pred CeEEEEe-------------CCHHHHHHHH-hcCCCEEEECCCCCccCCCChHHHHHHHHh-CCCCCcEEEECCCCCHHH
Confidence 5788998 2567765444 6799999998 5555677778888777764 4 577777544459999
Q ss_pred HHHHHHcCCcchHHHHhcCCHHHHH
Q 018446 254 IYYARTKGADAVLLIAAVLPDLDIR 278 (355)
Q Consensus 254 I~eAr~~GADAVLLIaaiL~~~~L~ 278 (355)
+.+.+.+|||+||.--++...++..
T Consensus 235 v~~l~~~Ga~gvLVG~almr~~d~~ 259 (272)
T 3tsm_A 235 CLRLEKSGIGTFLIGESLMRQHDVA 259 (272)
T ss_dssp HHHHHTTTCCEEEECHHHHTSSCHH
T ss_pred HHHHHHcCCCEEEEcHHHcCCcCHH
Confidence 9999999999999987777654433
No 331
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=73.95 E-value=3.7 Score=38.55 Aligned_cols=59 Identities=22% Similarity=0.359 Sum_probs=41.8
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHH----HHHHHHhcCCCCCee
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFE----NLEAVRSAGVKCPLL 243 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~e----dL~~VR~a~v~lPVL 243 (355)
++..||+=+--. | ..+..++++..++.||+++.|++ |-||..+.+ +++.|.++ +++||+
T Consensus 68 grvpviaGvg~~--~------t~~ai~la~~A~~~Gadavlv~~-P~y~~~s~~~l~~~f~~va~a-~~lPii 130 (297)
T 2rfg_A 68 GRVPVIAGAGSN--N------PVEAVRYAQHAQQAGADAVLCVA-GYYNRPSQEGLYQHFKMVHDA-IDIPII 130 (297)
T ss_dssp TSSCBEEECCCS--S------HHHHHHHHHHHHHHTCSEEEECC-CTTTCCCHHHHHHHHHHHHHH-CSSCEE
T ss_pred CCCeEEEccCCC--C------HHHHHHHHHHHHhcCCCEEEEcC-CCCCCCCHHHHHHHHHHHHHh-cCCCEE
Confidence 456788877221 1 23577899999999999999997 677777754 45567665 677764
No 332
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=73.90 E-value=3.9 Score=38.66 Aligned_cols=71 Identities=18% Similarity=0.160 Sum_probs=49.5
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCC---CCCC----HHHHHHHHhcCCCCCeecccc
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKY---FKGS----FENLEAVRSAGVKCPLLCKEF 247 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~f---F~GS----~edL~~VR~a~v~lPVLrKDF 247 (355)
++..||+=+- +.| ..+..++++..++.||+++.|++ |-| |.-+ +++++.|.++ +++||+-=++
T Consensus 76 grvpviaGvg--~~~------t~~ai~la~~A~~~Gadavlv~~-Pyy~~~~~~s~~~l~~~f~~va~a-~~lPiilYn~ 145 (309)
T 3fkr_A 76 GRVPVIVTTS--HYS------TQVCAARSLRAQQLGAAMVMAMP-PYHGATFRVPEAQIFEFYARVSDA-IAIPIMVQDA 145 (309)
T ss_dssp TSSCEEEECC--CSS------HHHHHHHHHHHHHTTCSEEEECC-SCBTTTBCCCHHHHHHHHHHHHHH-CSSCEEEEEC
T ss_pred CCCcEEEecC--Cch------HHHHHHHHHHHHHcCCCEEEEcC-CCCccCCCCCHHHHHHHHHHHHHh-cCCCEEEEeC
Confidence 5677998872 222 23678999999999999999998 555 4555 4566777776 7999876664
Q ss_pred -----ccCHHHHH
Q 018446 248 -----IVDAWQIY 255 (355)
Q Consensus 248 -----IIdpyQI~ 255 (355)
-+++-.+.
T Consensus 146 P~tg~~l~~~~~~ 158 (309)
T 3fkr_A 146 PASGTALSAPFLA 158 (309)
T ss_dssp GGGCCCCCHHHHH
T ss_pred CCCCCCCCHHHHH
Confidence 35554443
No 333
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=73.87 E-value=5.2 Score=38.23 Aligned_cols=134 Identities=16% Similarity=0.208 Sum_probs=83.1
Q ss_pred CCCccHHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEE------EEeccCC--CCCCCH-H
Q 018446 158 PPARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACL------SILTDEK--YFKGSF-E 228 (355)
Q Consensus 158 pp~rdF~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaI------SVLTD~~--fF~GS~-e 228 (355)
..++.|.++++. ....|+.-.|..|-- | +.+--..+. ||+..- +||--.+ .|-|+. +
T Consensus 122 T~t~~~v~~~~g------~~~~i~dTRKT~Pgl---R----~l~kyAV~~-GGg~nHR~gL~d~vlikdNHi~~~G~i~~ 187 (287)
T 3tqv_A 122 TVTNKLVKLISQ------YKTKLLDTRKTIPGF---R----LAQKYAVRC-GGGFNHRIGLFDAYLIKENHIRSAGGIAK 187 (287)
T ss_dssp HHHHHHHHHHTT------SSCEEECCSCCCTTC---H----HHHHHHHHH-TTCBCCCSSSSSSEEECTTTC----CHHH
T ss_pred HHHHHHHHHhCC------CCeEEEeecccCcch---H----HHHHHHHHh-cCchheeccCccEEEEeHHHHHHhCCHHH
Confidence 345678877764 246889998888852 1 222222333 454211 1333222 355665 5
Q ss_pred HHHHHHhcCCCCC--eeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeC---CHHHHHH
Q 018446 229 NLEAVRSAGVKCP--LLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDR 303 (355)
Q Consensus 229 dL~~VR~a~v~lP--VLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH---~~eELer 303 (355)
-++.+|+.....| |.+.++ -|..||..+|||.|+| .-.+.+++++.++... =.+.+|+. |++.+..
T Consensus 188 Av~~ar~~~~~~~IeVEv~tl----~ea~eAl~aGaD~I~L--Dn~~~~~l~~av~~~~---~~v~ieaSGGIt~~~i~~ 258 (287)
T 3tqv_A 188 AVTKAKKLDSNKVVEVEVTNL----DELNQAIAAKADIVML--DNFSGEDIDIAVSIAR---GKVALEVSGNIDRNSIVA 258 (287)
T ss_dssp HHHHHHHHCTTSCEEEEESSH----HHHHHHHHTTCSEEEE--ESCCHHHHHHHHHHHT---TTCEEEEESSCCTTTHHH
T ss_pred HHHHHHhhCCCCcEEEEeCCH----HHHHHHHHcCCCEEEE--cCCCHHHHHHHHHhhc---CCceEEEECCCCHHHHHH
Confidence 5667776533344 344544 6899999999999988 5577778777776554 26888884 7777777
Q ss_pred HhccCCCeEEEe
Q 018446 304 VLGIEGIELIGI 315 (355)
Q Consensus 304 Al~l~ga~iIGI 315 (355)
.... |+++|++
T Consensus 259 ~a~t-GVD~Isv 269 (287)
T 3tqv_A 259 IAKT-GVDFISV 269 (287)
T ss_dssp HHTT-TCSEEEC
T ss_pred HHHc-CCCEEEE
Confidence 7775 9999988
No 334
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=73.87 E-value=4.4 Score=38.42 Aligned_cols=62 Identities=23% Similarity=0.306 Sum_probs=44.7
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCH----HHHHHHHhcCCCCCeeccc
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSF----ENLEAVRSAGVKCPLLCKE 246 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~----edL~~VR~a~v~lPVLrKD 246 (355)
++..||+=+---| ..+..++++..++.||+++.|++ |-||.-+. ++++.|.++ +++||+-=+
T Consensus 91 grvpViaGvg~~s--------t~eai~la~~A~~~Gadavlv~~-P~y~~~s~~~l~~~f~~va~a-~~lPiilYn 156 (314)
T 3qze_A 91 GRIPVIAGTGANS--------TREAVALTEAAKSGGADACLLVT-PYYNKPTQEGMYQHFRHIAEA-VAIPQILYN 156 (314)
T ss_dssp TSSCEEEECCCSS--------HHHHHHHHHHHHHTTCSEEEEEC-CCSSCCCHHHHHHHHHHHHHH-SCSCEEEEE
T ss_pred CCCcEEEeCCCcC--------HHHHHHHHHHHHHcCCCEEEEcC-CCCCCCCHHHHHHHHHHHHHh-cCCCEEEEe
Confidence 4567888662221 23678899999999999999997 67887774 456677765 688876544
No 335
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=73.79 E-value=3.4 Score=38.60 Aligned_cols=60 Identities=17% Similarity=0.275 Sum_probs=42.7
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHH----HHHHHHhcCCCCCeec
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFE----NLEAVRSAGVKCPLLC 244 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~e----dL~~VR~a~v~lPVLr 244 (355)
++..||+=+-- .| ..+..++++..++.||+++.|++ |-||..+.+ +++.|.++ +++||+-
T Consensus 69 gr~pviaGvg~--~~------t~~ai~la~~a~~~Gadavlv~~-P~y~~~s~~~l~~~f~~ia~a-~~lPiil 132 (292)
T 2ojp_A 69 GRIPVIAGTGA--NA------TAEAISLTQRFNDSGIVGCLTVT-PYYNRPSQEGLYQHFKAIAEH-TDLPQIL 132 (292)
T ss_dssp TSSCEEEECCC--SS------HHHHHHHHHHTTTSSCSEEEEEC-CCSSCCCHHHHHHHHHHHHTT-CSSCEEE
T ss_pred CCCcEEEecCC--cc------HHHHHHHHHHHHhcCCCEEEECC-CCCCCCCHHHHHHHHHHHHHh-cCCCEEE
Confidence 45678887722 11 23577899999999999999997 678877754 45567664 6788654
No 336
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=73.60 E-value=20 Score=34.28 Aligned_cols=119 Identities=19% Similarity=0.241 Sum_probs=72.6
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCC-CCCC----HHHHHHHHh----cCCCCCeecc-----------cccc-CH-----
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKY-FKGS----FENLEAVRS----AGVKCPLLCK-----------EFIV-DA----- 251 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~f-F~GS----~edL~~VR~----a~v~lPVLrK-----------DFII-dp----- 251 (355)
++.+..+...+.|..+|-+-...-+ +.-+ .+++..+|+ .+..+..+.- +|.- |+
T Consensus 34 ~l~e~l~~aa~~G~d~VEl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GL~i~~~~~~~f~~p~~~~g~l~~~d~~~r~~ 113 (394)
T 1xla_A 34 DPVEAVHKLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDTGLKVPMVTTNLFSHPVFKDGGFTSNDRSIRRF 113 (394)
T ss_dssp CHHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHCCBCCEEECCCSSSGGGTTCSTTCSSHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEecCCccCcccCCchhhHHHHHHHHHHHHHcCCeEEEEecCccCCccccCCccCCCCHHHHHH
Confidence 5777777888888888877663211 1112 223444432 2444443322 2321 21
Q ss_pred ------HHHHHHHHcCCcchHHHHhcC--------C--------HHHHHHHHHHHHHcC--CcEEEEeC-----------
Q 018446 252 ------WQIYYARTKGADAVLLIAAVL--------P--------DLDIRYMTKICKLLG--LTALVEVH----------- 296 (355)
Q Consensus 252 ------yQI~eAr~~GADAVLLIaaiL--------~--------~~~L~~L~~~A~~LG--LeaLVEVH----------- 296 (355)
..|..|+.+||+.|.+....- + -+.|.++.++|.+.| +...+|-|
T Consensus 114 ~i~~~~~~i~~A~~LGa~~vvv~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v~l~lE~~~~e~~~~~~~~ 193 (394)
T 1xla_A 114 ALAKVLHNIDLAAEMGAETFVMWGGREGSEYDGSKDLAAALDRMREGVDTAAGYIKDKGYNLRIALEPKPNEPRGDIFLP 193 (394)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEECCTTCEESSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEECCCSSSSSSEESSC
T ss_pred HHHHHHHHHHHHHHhCCCEEEECCCCCccccccccCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCccccCC
Confidence 346678899999887643321 1 136778889999999 99999988
Q ss_pred CHHHHHHHhccCCCe-EEEee
Q 018446 297 DEREMDRVLGIEGIE-LIGIN 316 (355)
Q Consensus 297 ~~eELerAl~l~ga~-iIGIN 316 (355)
|.+++.+.++.-+.+ -+|++
T Consensus 194 t~~~~~~li~~v~~pn~vgl~ 214 (394)
T 1xla_A 194 TVGHGLAFIEQLEHGDIVGLN 214 (394)
T ss_dssp SHHHHHHHHTTCTTGGGEEEC
T ss_pred CHHHHHHHHHHhCCCCceEEE
Confidence 667887777543443 36663
No 337
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=73.59 E-value=4.4 Score=39.93 Aligned_cols=93 Identities=15% Similarity=0.129 Sum_probs=72.1
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~ 276 (355)
...+++..++.|...| |+.+-.++++.+..+|+. +++||..-+-+.++++..+....| +|.|.+=+.-. +-.+
T Consensus 238 A~~~~~~Le~~~i~~i----EqP~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~ll~~ga~d~v~~k~~~~GGit~ 312 (422)
T 3tji_A 238 AVQLAKQLEPFQPYFI----EDILPPQQSAWLEQVRQQ-SCVPLALGELFNNPAEWHDLIVNRRIDFIRCHVSQIGGITP 312 (422)
T ss_dssp HHHHHHHHGGGCCSEE----ECCSCGGGGGGHHHHHHH-CCCCEEECTTCCSGGGTHHHHHTTCCSEECCCGGGGTSHHH
T ss_pred HHHHHHHHHhhCCCeE----ECCCChhhHHHHHHHHhh-CCCCEEEeCCcCCHHHHHHHHhcCCCCEEecCccccCCHHH
Confidence 3466788888886654 445556788999999986 899999999999999999988876 78877744443 4567
Q ss_pred HHHHHHHHHHcCCcEEEEeCCH
Q 018446 277 IRYMTKICKLLGLTALVEVHDE 298 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH~~ 298 (355)
...+..+|+..|+.+ -+|+.
T Consensus 313 ~~kia~lA~a~gv~v--~~h~~ 332 (422)
T 3tji_A 313 ALKLAHLCQAFGVRL--AWHGP 332 (422)
T ss_dssp HHHHHHHHHHTTCEE--CCCCC
T ss_pred HHHHHHHHHHcCCEE--EecCC
Confidence 788999999999975 45554
No 338
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=73.54 E-value=44 Score=30.48 Aligned_cols=133 Identities=18% Similarity=0.108 Sum_probs=80.0
Q ss_pred ccHHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCc----------eEEEEeccCCCCCCCHHHH
Q 018446 161 RDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGA----------ACLSILTDEKYFKGSFENL 230 (355)
Q Consensus 161 rdF~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GA----------aaISVLTD~~fF~GS~edL 230 (355)
..|.+.|.... ++..+..|+|-.....| + ...+++...+.|. ..|| .| +.+.|
T Consensus 121 PtL~evL~~~~---~~~~l~IEiK~~~~~~~-----~-~~~v~~~l~~~~~~~~~~~~~~~vii~------SF--~~~~l 183 (287)
T 2oog_A 121 PTLDEILERYG---PNANYYIETKSPDVYPG-----M-EEQLLASLKKHHLLNNNKLKNGHVMIQ------SF--SDESL 183 (287)
T ss_dssp CBHHHHHHHHC---TTSCEEEECCCTTTSTT-----H-HHHHHHHHHHTTCSSHHHHHTTSEEEE------ES--CHHHH
T ss_pred CCHHHHHHhhC---cCceEEEEECCCCCcch-----H-HHHHHHHHHHcCCcccccCCCCCEEEE------eC--CHHHH
Confidence 34666665432 34679999995322111 0 2356666776664 1222 13 67889
Q ss_pred HHHHhcCCCCCe--eccccc---cCHHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEE-EeCCHHHHHHH
Q 018446 231 EAVRSAGVKCPL--LCKEFI---VDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALV-EVHDEREMDRV 304 (355)
Q Consensus 231 ~~VR~a~v~lPV--LrKDFI---IdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLV-EVH~~eELerA 304 (355)
..+|+...++|+ |..... ..+..+ ......|++|-.-...+++ .+++.+++.|+.+.+ -|.+.+++++.
T Consensus 184 ~~~~~~~p~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~----~~v~~~~~~G~~v~~wTvn~~~~~~~l 258 (287)
T 2oog_A 184 KKIHRQNKHVPLVKLVDKGELQQFNDQRL-KEIRSYAIGLGPDYTDLTE----QNTHHLKDLGFIVHPYTVNEKADMLRL 258 (287)
T ss_dssp HHHHHHCTTSCEEEEECTTTGGGCCHHHH-HHHHTTCSEEEEBGGGCCH----HHHHHHHHTTCEECCBCCCSHHHHHHH
T ss_pred HHHHHhCCCCcEEEEecCCcccccCHHHH-HHHhhhheEEcccHhhcCH----HHHHHHHHCCCeEEEEeCCCHHHHHHH
Confidence 999876566774 332221 122222 2333456665444445554 578999999998875 47899999999
Q ss_pred hccCCCeEEEee
Q 018446 305 LGIEGIELIGIN 316 (355)
Q Consensus 305 l~l~ga~iIGIN 316 (355)
+.+ |++-|--|
T Consensus 259 ~~~-GVdgIiTD 269 (287)
T 2oog_A 259 NKY-GVDGVFTN 269 (287)
T ss_dssp HHH-TCSEEEES
T ss_pred HHc-CCCEEEeC
Confidence 997 88877544
No 339
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=73.47 E-value=7.7 Score=37.75 Aligned_cols=120 Identities=13% Similarity=0.108 Sum_probs=72.3
Q ss_pred CHHHHHHHHHHc--CceEEEEeccCCC-----CCCCHHH----HHHHHhc------CCCCCeeccccc-cCH---HHHHH
Q 018446 198 DPVEIARSYEKG--GAACLSILTDEKY-----FKGSFEN----LEAVRSA------GVKCPLLCKEFI-VDA---WQIYY 256 (355)
Q Consensus 198 Dp~~iA~~Ye~~--GAaaISVLTD~~f-----F~GS~ed----L~~VR~a------~v~lPVLrKDFI-Idp---yQI~e 256 (355)
++.++++..+.. +|++|-|+.--.. +..+.+. +..++++ .+++||+.|==. ++. .++.+
T Consensus 162 ~~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~ 241 (367)
T 3zwt_A 162 AAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIAS 241 (367)
T ss_dssp HHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHH
Confidence 567777665544 4888888743211 2223333 3344431 157899988110 121 22333
Q ss_pred -HHHcCCcchHHHHhcCC----------------------HHHHHHHHHHHHHc--CCcEEE--EeCCHHHHHHHhccCC
Q 018446 257 -ARTKGADAVLLIAAVLP----------------------DLDIRYMTKICKLL--GLTALV--EVHDEREMDRVLGIEG 309 (355)
Q Consensus 257 -Ar~~GADAVLLIaaiL~----------------------~~~L~~L~~~A~~L--GLeaLV--EVH~~eELerAl~l~g 309 (355)
+..+|||+|.++-...+ +..+..+.++.+.+ .+..+. -|+|.+++.+++.+ |
T Consensus 242 ~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~-G 320 (367)
T 3zwt_A 242 VVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRA-G 320 (367)
T ss_dssp HHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHH-T
T ss_pred HHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHc-C
Confidence 45789999998754421 12345566777777 455444 47999999999996 9
Q ss_pred CeEEEeeCC
Q 018446 310 IELIGINNR 318 (355)
Q Consensus 310 a~iIGINNR 318 (355)
|+.|+|-.-
T Consensus 321 Ad~V~vgra 329 (367)
T 3zwt_A 321 ASLVQLYTA 329 (367)
T ss_dssp CSEEEESHH
T ss_pred CCEEEECHH
Confidence 999998543
No 340
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=73.45 E-value=4.2 Score=38.34 Aligned_cols=62 Identities=23% Similarity=0.293 Sum_probs=45.4
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHH----HHHHHHhcCCCCCeeccc
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFE----NLEAVRSAGVKCPLLCKE 246 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~e----dL~~VR~a~v~lPVLrKD 246 (355)
++..||+=+- +.| ..+..++++..++.||+++.|++ |-||..+.+ +++.|.++ +++||+-=+
T Consensus 83 grvpviaGvg--~~~------t~~ai~la~~a~~~Gadavlv~~-P~y~~~s~~~l~~~f~~va~a-~~lPiilYn 148 (304)
T 3l21_A 83 DRARVIAGAG--TYD------TAHSIRLAKACAAEGAHGLLVVT-PYYSKPPQRGLQAHFTAVADA-TELPMLLYD 148 (304)
T ss_dssp TTSEEEEECC--CSC------HHHHHHHHHHHHHHTCSEEEEEC-CCSSCCCHHHHHHHHHHHHTS-CSSCEEEEE
T ss_pred CCCeEEEeCC--CCC------HHHHHHHHHHHHHcCCCEEEECC-CCCCCCCHHHHHHHHHHHHHh-cCCCEEEEe
Confidence 5667998772 222 23678999999999999999987 668887754 45677775 788886543
No 341
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=73.42 E-value=2.2 Score=37.99 Aligned_cols=74 Identities=16% Similarity=0.158 Sum_probs=55.9
Q ss_pred HHHHHHHHc--CceEEEEeccCCCCCC------CHHHHHHHHhcCC-CCCeeccccccCHHHHHHHHHcCCcchHHHHhc
Q 018446 201 EIARSYEKG--GAACLSILTDEKYFKG------SFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (355)
Q Consensus 201 ~iA~~Ye~~--GAaaISVLTD~~fF~G------S~edL~~VR~a~v-~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaai 271 (355)
+..+.|... |++.+-+.|=..-|+| .++.++.+|+. . ++|+ .=|++|.+-.+.++..+|||.|...-++
T Consensus 127 e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~-~~~~pi-~v~GGI~~~ni~~~~~aGaD~vvvGsai 204 (228)
T 1h1y_A 127 EEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKK-YPSLDI-EVDGGLGPSTIDVAASAGANCIVAGSSI 204 (228)
T ss_dssp GGGHHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHH-CTTSEE-EEESSCSTTTHHHHHHHTCCEEEESHHH
T ss_pred HHHHHHHhcCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHh-cCCCCE-EEECCcCHHHHHHHHHcCCCEEEECHHH
Confidence 345667765 8898888764333444 36778888875 5 7775 4699999999999999999999999998
Q ss_pred CCHHH
Q 018446 272 LPDLD 276 (355)
Q Consensus 272 L~~~~ 276 (355)
...++
T Consensus 205 ~~~~d 209 (228)
T 1h1y_A 205 FGAAE 209 (228)
T ss_dssp HTSSC
T ss_pred HCCCC
Confidence 86533
No 342
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=73.23 E-value=4.5 Score=35.98 Aligned_cols=84 Identities=12% Similarity=0.011 Sum_probs=59.9
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHH
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDI 277 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L 277 (355)
++.++.++++ .||+.|.+...+ -.|.++.|+.+|....++|++.== .|++--+.+-..+|||+|-.+-++.. .+.
T Consensus 113 t~~e~~~A~~-~Gad~v~~fpa~--~~gG~~~lk~l~~~~~~ipvvaiG-GI~~~n~~~~l~aGa~~vavgSai~~-~d~ 187 (207)
T 2yw3_A 113 TPTEVERALA-LGLSALKFFPAE--PFQGVRVLRAYAEVFPEVRFLPTG-GIKEEHLPHYAALPNLLAVGGSWLLQ-GNL 187 (207)
T ss_dssp SHHHHHHHHH-TTCCEEEETTTT--TTTHHHHHHHHHHHCTTCEEEEBS-SCCGGGHHHHHTCSSBSCEEESGGGS-SCH
T ss_pred CHHHHHHHHH-CCCCEEEEecCc--cccCHHHHHHHHhhCCCCcEEEeC-CCCHHHHHHHHhCCCcEEEEehhhhC-CCH
Confidence 5777777765 599999983311 125689999999852378887532 36788899999999999999888887 455
Q ss_pred HHHHHHHHH
Q 018446 278 RYMTKICKL 286 (355)
Q Consensus 278 ~~L~~~A~~ 286 (355)
.+..+.|++
T Consensus 188 ~~i~~~a~~ 196 (207)
T 2yw3_A 188 EAVRAKVRA 196 (207)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 455555543
No 343
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=73.18 E-value=3.4 Score=38.62 Aligned_cols=62 Identities=26% Similarity=0.333 Sum_probs=44.1
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHH----HHHHHHhcCCCCCeeccc
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFE----NLEAVRSAGVKCPLLCKE 246 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~e----dL~~VR~a~v~lPVLrKD 246 (355)
++..||+=+--.| ..+..++++..++.||+++.|++ |-||..+.+ +++.|.++ +++||+-=+
T Consensus 72 grvpviaGvg~~~--------t~~ai~la~~a~~~Gadavlv~~-P~y~~~~~~~l~~~f~~va~a-~~lPiilYn 137 (293)
T 1f6k_A 72 DQIALIAQVGSVN--------LKEAVELGKYATELGYDCLSAVT-PFYYKFSFPEIKHYYDTIIAE-TGSNMIVYS 137 (293)
T ss_dssp TSSEEEEECCCSC--------HHHHHHHHHHHHHHTCSEEEEEC-CCSSCCCHHHHHHHHHHHHHH-HCCCEEEEE
T ss_pred CCCeEEEecCCCC--------HHHHHHHHHHHHhcCCCEEEECC-CCCCCCCHHHHHHHHHHHHHh-CCCCEEEEE
Confidence 5667998772211 23677899999999999999997 678888854 45566665 677865444
No 344
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=73.02 E-value=4.3 Score=39.73 Aligned_cols=72 Identities=21% Similarity=0.138 Sum_probs=50.7
Q ss_pred HHHHHHHHcCceEEEEecc---------------CCCC-CC---CHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC
Q 018446 201 EIARSYEKGGAACLSILTD---------------EKYF-KG---SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG 261 (355)
Q Consensus 201 ~iA~~Ye~~GAaaISVLTD---------------~~fF-~G---S~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G 261 (355)
+.|+..+++||++|.|--- ..+| .+ ..+-|..++....++||+.-==|-++..+.+|.++|
T Consensus 221 e~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~~~~~ipvia~GGI~~g~Dv~KaLalG 300 (365)
T 3sr7_A 221 KTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQPLMDKVEILASGGIRHPLDIIKALVLG 300 (365)
T ss_dssp HHHHHHHHHTCCEEECCCBC--------------CGGGTTCSCBHHHHHHHHGGGTTTSEEEECSSCCSHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHHHHHHHhcCCCeEEEeCCCCCHHHHHHHHHcC
Confidence 5678888899999988210 0011 11 134555665432378999998899999999999999
Q ss_pred CcchHHHHhcC
Q 018446 262 ADAVLLIAAVL 272 (355)
Q Consensus 262 ADAVLLIaaiL 272 (355)
||+|.+=-.+|
T Consensus 301 AdaV~ig~~~l 311 (365)
T 3sr7_A 301 AKAVGLSRTML 311 (365)
T ss_dssp CSEEEESHHHH
T ss_pred CCEEEECHHHH
Confidence 99998755444
No 345
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=72.87 E-value=6.2 Score=34.70 Aligned_cols=108 Identities=6% Similarity=-0.111 Sum_probs=69.3
Q ss_pred CHHHHHHHHHHcC--ceEEEEeccCCCCCCCHHHHHHHHhc--CCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCC
Q 018446 198 DPVEIARSYEKGG--AACLSILTDEKYFKGSFENLEAVRSA--GVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (355)
Q Consensus 198 Dp~~iA~~Ye~~G--AaaISVLTD~~fF~GS~edL~~VR~a--~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~ 273 (355)
+..+..+..++.| +.++=| .|+.|+..+.+.++.+|+. +..+++=.|=-.+...-+..+..+|||.|.+-+.. +
T Consensus 14 ~~~~~~~~~~~~~~~v~~~kv-~~~~f~~~G~~~i~~l~~~~p~~~v~lD~kl~dip~t~~~~~~~~Gad~itvh~~~-g 91 (216)
T 1q6o_A 14 TMDSAYETTRLIAEEVDIIEV-GTILCVGEGVRAVRDLKALYPHKIVLADAKIADAGKILSRMCFEANADWVTVICCA-D 91 (216)
T ss_dssp SHHHHHHHHHHHGGGCSEEEE-CHHHHHHHCTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTS-C
T ss_pred CHHHHHHHHHHhcccCCEEEE-CHHHHHHhCHHHHHHHHHhCCCCeEEEEEEecccHHHHHHHHHhCCCCEEEEeccC-C
Confidence 4444444444444 366765 4455666677889999885 23455444433356666778889999998876654 4
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeC-C--HHHHHHHhcc
Q 018446 274 DLDIRYMTKICKLLGLTALVEVH-D--EREMDRVLGI 307 (355)
Q Consensus 274 ~~~L~~L~~~A~~LGLeaLVEVH-~--~eELerAl~l 307 (355)
.+.++.+++.+++.|+.+.+.+- . ....+.+...
T Consensus 92 ~~~l~~~~~~~~~~g~~~~~~ll~~~t~~~~~~l~~~ 128 (216)
T 1q6o_A 92 INTAKGALDVAKEFNGDVQIELTGYWTWEQAQQWRDA 128 (216)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCceeeeeeCCChhhHHHHHhc
Confidence 54689999999999999765333 2 4455554443
No 346
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=72.84 E-value=8.1 Score=35.51 Aligned_cols=72 Identities=15% Similarity=0.277 Sum_probs=54.6
Q ss_pred HHHcCCcchHHHH-------------hcCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCcc
Q 018446 257 ARTKGADAVLLIA-------------AVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETF 323 (355)
Q Consensus 257 Ar~~GADAVLLIa-------------aiL~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~Tf 323 (355)
....|+|.|-+.+ ..+++++++.+++.|+++|+.+.+-++..+.++.++++ |++.|. +.+
T Consensus 176 ~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i~~~~~~-g~~~i~------H~~ 248 (403)
T 3gnh_A 176 LKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAHGASGIREAVRA-GVDTIE------HAS 248 (403)
T ss_dssp HHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHT-TCSEEE------ECT
T ss_pred HHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-CCCEEe------cCC
Confidence 3446887776654 35889999999999999999999999999999999996 776543 344
Q ss_pred ccChhhHHhhhc
Q 018446 324 EVDNSNTKKLLE 335 (355)
Q Consensus 324 evDl~~t~~L~~ 335 (355)
-+|.+....+.+
T Consensus 249 ~~~~~~~~~~~~ 260 (403)
T 3gnh_A 249 LVDDEGIKLAVQ 260 (403)
T ss_dssp TCCHHHHHHHHH
T ss_pred cCCHHHHHHHHH
Confidence 456555555543
No 347
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=72.65 E-value=4.5 Score=38.12 Aligned_cols=62 Identities=18% Similarity=0.203 Sum_probs=44.5
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHH----HHHHHHhcCCCCCeeccc
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFE----NLEAVRSAGVKCPLLCKE 246 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~e----dL~~VR~a~v~lPVLrKD 246 (355)
++..||+=+--.| ..+..++++..++.||+++.|++ |-||..+.+ +++.|.++ +++||+-=+
T Consensus 80 grvpViaGvg~~s--------t~~ai~la~~A~~~Gadavlv~~-P~y~~~s~~~l~~~f~~va~a-~~lPiilYn 145 (306)
T 1o5k_A 80 GKIPVIVGAGTNS--------TEKTLKLVKQAEKLGANGVLVVT-PYYNKPTQEGLYQHYKYISER-TDLGIVVYN 145 (306)
T ss_dssp TSSCEEEECCCSC--------HHHHHHHHHHHHHHTCSEEEEEC-CCSSCCCHHHHHHHHHHHHTT-CSSCEEEEE
T ss_pred CCCeEEEcCCCcc--------HHHHHHHHHHHHhcCCCEEEECC-CCCCCCCHHHHHHHHHHHHHh-CCCCEEEEe
Confidence 4567888772221 23577899999999999999997 678887754 45577765 788876544
No 348
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=72.64 E-value=15 Score=35.59 Aligned_cols=116 Identities=13% Similarity=0.045 Sum_probs=82.3
Q ss_pred HHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCH---HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCC
Q 018446 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDP---VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVK 239 (355)
Q Consensus 163 F~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp---~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~ 239 (355)
...++++... ....+..+. +..+++ ..+++..+..|..-| |+.+-..+++.+..+|+. +.
T Consensus 188 ~v~avReavG--~d~~l~vDa----------N~~~~~~~A~~~~~~l~~~~i~~i----EeP~~~~d~~~~~~l~~~-~~ 250 (388)
T 3tcs_A 188 IIPTMRRELG--DDVDLLIDA----------NSCYTPDRAIEVGHMLQDHGFCHF----EEPCPYWELAQTKQVTDA-LD 250 (388)
T ss_dssp HHHHHHHHHC--SSSEEEEEC----------TTCCCHHHHHHHHHHHHHTTCCEE----ECCSCTTCHHHHHHHHHH-CS
T ss_pred HHHHHHHHhC--CCCeEEEeC----------CCCcCHHHHHHHHHHHhhcCCeEE----ECCCCccCHHHHHHHHHh-cC
Confidence 3456665431 234566664 223444 457788888886544 455566789999999986 89
Q ss_pred CCeeccccccCHHHHHHHHHcC-CcchHHHH-hcCCHHHHHHHHHHHHHcCCcEEEEeCC
Q 018446 240 CPLLCKEFIVDAWQIYYARTKG-ADAVLLIA-AVLPDLDIRYMTKICKLLGLTALVEVHD 297 (355)
Q Consensus 240 lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIa-aiL~~~~L~~L~~~A~~LGLeaLVEVH~ 297 (355)
+||..-+-+.+.++..+....| +|.|.+=+ .+=+-.+...+..+|+..|+.+.. |+
T Consensus 251 iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGit~a~kia~~A~~~gv~~~~--h~ 308 (388)
T 3tcs_A 251 IDVTGGEQDCDLPTWQRMIDMRAVDIVQPDILYLGGICRTLRVVEMARAAGLPVTP--HC 308 (388)
T ss_dssp SCEEECTTCCCHHHHHHHHHHTCCSEECCCHHHHTSHHHHHHHHHHHHHTTCCBCC--CC
T ss_pred CCEEcCCccCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEe--cC
Confidence 9999999999999999888776 67776633 333455778899999999999774 54
No 349
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=72.59 E-value=19 Score=32.42 Aligned_cols=63 Identities=11% Similarity=0.018 Sum_probs=41.4
Q ss_pred HHHHHHHcCCcchHHHH----hcC-----C--------HHHHHHHHHHHHHcCCcEEEEeC---------CHHHHHHHhc
Q 018446 253 QIYYARTKGADAVLLIA----AVL-----P--------DLDIRYMTKICKLLGLTALVEVH---------DEREMDRVLG 306 (355)
Q Consensus 253 QI~eAr~~GADAVLLIa----aiL-----~--------~~~L~~L~~~A~~LGLeaLVEVH---------~~eELerAl~ 306 (355)
.|..|..+||..|.... ... + -+.|.++.++|.+.|+...+|-| +.+++.+.++
T Consensus 112 ~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~ 191 (309)
T 2hk0_A 112 TLSNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDLGINLCIEVLNRFENHVLNTAAEGVAFVK 191 (309)
T ss_dssp HHHHHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCTTTCSSCCSHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEeeccccccccCCCcCChHHHHHHHHHHHHHHHHHHHHcCCEEEEeecccccccccCCHHHHHHHHH
Confidence 45667777887776321 111 1 13567888899999999999998 5777777665
Q ss_pred cCCCeEEEe
Q 018446 307 IEGIELIGI 315 (355)
Q Consensus 307 l~ga~iIGI 315 (355)
.-+.+-+|+
T Consensus 192 ~v~~~~vg~ 200 (309)
T 2hk0_A 192 DVGKNNVKV 200 (309)
T ss_dssp HHTCTTEEE
T ss_pred HcCCCCeEE
Confidence 323334555
No 350
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=72.52 E-value=5.1 Score=37.36 Aligned_cols=61 Identities=23% Similarity=0.345 Sum_probs=43.7
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHH----HHHHHhcCCCCCeecc
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFEN----LEAVRSAGVKCPLLCK 245 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~ed----L~~VR~a~v~lPVLrK 245 (355)
++..||+=+--. | ..+..++++..++.||+++.|++ |-||..+.+. ++.|.++ +++||+-=
T Consensus 68 gr~pviaGvg~~--~------t~~ai~la~~A~~~Gadavlv~~-P~y~~~s~~~l~~~f~~ia~a-~~lPiilY 132 (292)
T 2vc6_A 68 GRVPVIAGAGSN--S------TAEAIAFVRHAQNAGADGVLIVS-PYYNKPTQEGIYQHFKAIDAA-STIPIIVY 132 (292)
T ss_dssp TSSCBEEECCCS--S------HHHHHHHHHHHHHTTCSEEEEEC-CCSSCCCHHHHHHHHHHHHHH-CSSCEEEE
T ss_pred CCCcEEEecCCc--c------HHHHHHHHHHHHHcCCCEEEEcC-CCCCCCCHHHHHHHHHHHHHh-CCCCEEEE
Confidence 456788877221 1 13577899999999999999998 6788777554 4467765 78887653
No 351
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=72.50 E-value=14 Score=33.24 Aligned_cols=117 Identities=11% Similarity=0.019 Sum_probs=63.0
Q ss_pred CCHHHHHHHHHHcCceEEEEeccCC--C--CCCCHHHHHHHH-hcCCCCCeec--cccc-cC----------HHHHHHHH
Q 018446 197 FDPVEIARSYEKGGAACLSILTDEK--Y--FKGSFENLEAVR-SAGVKCPLLC--KEFI-VD----------AWQIYYAR 258 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVLTD~~--f--F~GS~edL~~VR-~a~v~lPVLr--KDFI-Id----------pyQI~eAr 258 (355)
.++.+..+...+.|..+|-+..+.. + +....+.+++.. +++..+..++ .||. -+ ...|..|.
T Consensus 36 ~~~~~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~ 115 (296)
T 2g0w_A 36 VSFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTEVEYITQWGTAEDRTAEQQKKEQTTFHMAR 115 (296)
T ss_dssp SCHHHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEEEEECBCCCSSTTTCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCceEeehhhhccccCChHHHHHHHHHHHHHHHHH
Confidence 4566666666666666666654310 0 233444444332 2222222211 2221 11 24567788
Q ss_pred HcCCcchHHHHh-cCC----HHHHHHHHHHHHHcCCcEEEEeC------CHHHHHHHhccCCCeEEEe
Q 018446 259 TKGADAVLLIAA-VLP----DLDIRYMTKICKLLGLTALVEVH------DEREMDRVLGIEGIELIGI 315 (355)
Q Consensus 259 ~~GADAVLLIaa-iL~----~~~L~~L~~~A~~LGLeaLVEVH------~~eELerAl~l~ga~iIGI 315 (355)
.+||+.|.+-.. -.+ -+.|.++.++| .|+...+|-| +.+++.+.++.-+.+-+|+
T Consensus 116 ~lGa~~v~~g~~~~~~~~~~~~~l~~l~~~a--~Gv~l~lE~~~~~~~~~~~~~~~l~~~v~~~~vgl 181 (296)
T 2g0w_A 116 LFGVKHINCGLLEKIPEEQIIVALGELCDRA--EELIIGLEFMPYSGVADLQAAWRVAEACGRDNAQL 181 (296)
T ss_dssp HHTCCEEEECCCSCCCHHHHHHHHHHHHHHH--TTSEEEEECCTTSSSCSHHHHHHHHHHHTCTTEEE
T ss_pred HcCCCEEEEcCCCCCCHHHHHHHHHHHHHHh--cCCEEEEEecCCCCCCCHHHHHHHHHHhCCCCeEE
Confidence 999998754110 011 23567777888 8999999976 5777777664323334554
No 352
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=72.48 E-value=3.7 Score=38.61 Aligned_cols=49 Identities=14% Similarity=0.268 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCccc
Q 018446 274 DLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFE 324 (355)
Q Consensus 274 ~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~Tfe 324 (355)
.+-|+.|.++++++||..+.|+||...++.+.+ .++++-|-.++..+++
T Consensus 61 ~~GL~~l~~~~~e~Glp~~te~~d~~~~~~l~~--~vd~~~IgA~~~rn~~ 109 (267)
T 2nwr_A 61 EYGVKALRKVKEEFGLKITTDIHESWQAEPVAE--VADIIQIPAFLCRQTD 109 (267)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECSSGGGHHHHHT--TCSEEEECGGGTTCHH
T ss_pred HHHHHHHHHHHHhcCCeEEEecCCHHhHHHHHh--cCCEEEECcccccCHH
Confidence 456888999999999999999999999999876 4899999999998887
No 353
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=72.41 E-value=5 Score=38.11 Aligned_cols=62 Identities=21% Similarity=0.340 Sum_probs=44.7
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCH----HHHHHHHhcCCCCCeeccc
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSF----ENLEAVRSAGVKCPLLCKE 246 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~----edL~~VR~a~v~lPVLrKD 246 (355)
++..||+=+--.| ..+..++++..++.||+++.|++ |-||.-+. ++++.|.++ +++||+-=+
T Consensus 90 grvpViaGvg~~s--------t~~ai~la~~A~~~Gadavlv~~-P~y~~~~~~~l~~~f~~va~a-~~lPiilYn 155 (315)
T 3si9_A 90 KRVPVVAGAGSNS--------TSEAVELAKHAEKAGADAVLVVT-PYYNRPNQRGLYTHFSSIAKA-ISIPIIIYN 155 (315)
T ss_dssp TSSCBEEECCCSS--------HHHHHHHHHHHHHTTCSEEEEEC-CCSSCCCHHHHHHHHHHHHHH-CSSCEEEEE
T ss_pred CCCcEEEeCCCCC--------HHHHHHHHHHHHhcCCCEEEECC-CCCCCCCHHHHHHHHHHHHHc-CCCCEEEEe
Confidence 4567888762221 23678899999999999999997 66777664 455677775 788876544
No 354
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=72.34 E-value=1.9 Score=39.37 Aligned_cols=138 Identities=14% Similarity=0.248 Sum_probs=84.8
Q ss_pred cHHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccC-CCCCCCHHHHHHHHhcCCCC
Q 018446 162 DFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDE-KYFKGSFENLEAVRSAGVKC 240 (355)
Q Consensus 162 dF~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~-~fF~GS~edL~~VR~a~v~l 240 (355)
.+.++|+... ...+.+-++=. ||..+.+.|.++||+.|+|.-|. . .--.+.++.+|+.+..+
T Consensus 47 ~~v~~lr~~~----~~~~dvhLmv~-----------dp~~~i~~~~~aGAd~itvh~Ea~~--~~~~~~i~~i~~~G~k~ 109 (231)
T 3ctl_A 47 FFVSQVKKLA----TKPLDCHLMVT-----------RPQDYIAQLARAGADFITLHPETIN--GQAFRLIDEIRRHDMKV 109 (231)
T ss_dssp HHHHHHHTTC----CSCEEEEEESS-----------CGGGTHHHHHHHTCSEEEECGGGCT--TTHHHHHHHHHHTTCEE
T ss_pred HHHHHHHhcc----CCcEEEEEEec-----------CHHHHHHHHHHcCCCEEEECcccCC--ccHHHHHHHHHHcCCeE
Confidence 3555665531 12466666544 45567789999999999999875 4 22346777778764332
Q ss_pred C-eeccccccCHHHHHHHHHcCCcchHHHHh--------cCC--HHHHHHHHHHHHHcCCcEEEEeC---CHHHHHHHhc
Q 018446 241 P-LLCKEFIVDAWQIYYARTKGADAVLLIAA--------VLP--DLDIRYMTKICKLLGLTALVEVH---DEREMDRVLG 306 (355)
Q Consensus 241 P-VLrKDFIIdpyQI~eAr~~GADAVLLIaa--------iL~--~~~L~~L~~~A~~LGLeaLVEVH---~~eELerAl~ 306 (355)
= .|.-. +|....+....++|-||++.- ..+ .+.++++-++..+.|+...+||- |.+.+..+.+
T Consensus 110 gv~lnp~---tp~~~~~~~l~~~D~VlvmsV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~~~~~~~~~~ 186 (231)
T 3ctl_A 110 GLILNPE---TPVEAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMA 186 (231)
T ss_dssp EEEECTT---CCGGGGTTTGGGCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCSTTTHHHHHH
T ss_pred EEEEECC---CcHHHHHHHHhcCCEEEEeeeccCcCCccccHHHHHHHHHHHHHHhccCCCceEEEECCcCHHHHHHHHH
Confidence 1 12222 233333444458897765321 111 23556777777778889999985 4667777777
Q ss_pred cCCCeEEEeeCCCC
Q 018446 307 IEGIELIGINNRNL 320 (355)
Q Consensus 307 l~ga~iIGINNRdL 320 (355)
+ ||+++.+=++-+
T Consensus 187 a-GAd~~V~G~sai 199 (231)
T 3ctl_A 187 A-GADVFIVGTSGL 199 (231)
T ss_dssp H-TCCEEEECTTTT
T ss_pred c-CCCEEEEccHHH
Confidence 6 898887764554
No 355
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=72.26 E-value=7.9 Score=35.35 Aligned_cols=82 Identities=10% Similarity=0.036 Sum_probs=49.4
Q ss_pred CCHHHHHHHHHHcCceEEEEeccCCCCCC---C--------------HHHHHHHHhcCCCCCeeccccccCHHHHHHHHH
Q 018446 197 FDPVEIARSYEKGGAACLSILTDEKYFKG---S--------------FENLEAVRSAGVKCPLLCKEFIVDAWQIYYART 259 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVLTD~~fF~G---S--------------~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~ 259 (355)
.++.++.+...+.|-.+.|+.+.. +.+ + -+.+..++ --|..|..
T Consensus 59 ~~~~~~~~~l~~~GL~v~~~~~~~--~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-----------------~~i~~A~~ 119 (303)
T 3l23_A 59 VPMMDFKKMAEDAGLKIISSHVNP--VDTSISDPFKAMIFKYSKEVTPKIMEYWK-----------------ATAADHAK 119 (303)
T ss_dssp EEHHHHHHHHHHTTCEEEEEECCC--BCTTCSSTTTTBCCSCCTTTHHHHHHHHH-----------------HHHHHHHH
T ss_pred CCHHHHHHHHHHcCCeEEEEeccc--ccccccCcccccccccchhhHHHHHHHHH-----------------HHHHHHHH
Confidence 467788888888887777765532 111 1 11122222 23455777
Q ss_pred cCCcchHHHHh--cCCH-------HHHHHHHHHHHHcCCc--EEEEeCC
Q 018446 260 KGADAVLLIAA--VLPD-------LDIRYMTKICKLLGLT--ALVEVHD 297 (355)
Q Consensus 260 ~GADAVLLIaa--iL~~-------~~L~~L~~~A~~LGLe--aLVEVH~ 297 (355)
+||..|.+-.. --++ +.|.++.++|.+.|+. ..+|-|+
T Consensus 120 lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~~l~~En~~ 168 (303)
T 3l23_A 120 LGCKYLIQPMMPTITTHDEAKLVCDIFNQASDVIKAEGIATGFGYHNHN 168 (303)
T ss_dssp TTCSEEEECSCCCCCSHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred cCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcceEEEccCc
Confidence 77776654210 0111 3577888999999999 9999886
No 356
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=72.21 E-value=5.7 Score=37.31 Aligned_cols=62 Identities=29% Similarity=0.320 Sum_probs=44.9
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCH----HHHHHHHhcCCCCCeeccc
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSF----ENLEAVRSAGVKCPLLCKE 246 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~----edL~~VR~a~v~lPVLrKD 246 (355)
++..||+=+--.| ..+..++++..++.||+|+.|++ |-||.-+. ++++.|.++ +++||+-=+
T Consensus 72 grvpviaGvg~~~--------t~~ai~la~~a~~~Gadavlv~~-P~y~~~~~~~l~~~f~~va~a-~~lPiilYn 137 (300)
T 3eb2_A 72 RRVPVVAGVASTS--------VADAVAQAKLYEKLGADGILAIL-EAYFPLKDAQIESYFRAIADA-VEIPVVIYT 137 (300)
T ss_dssp TSSCBEEEEEESS--------HHHHHHHHHHHHHHTCSEEEEEE-CCSSCCCHHHHHHHHHHHHHH-CSSCEEEEE
T ss_pred CCCcEEEeCCCCC--------HHHHHHHHHHHHHcCCCEEEEcC-CCCCCCCHHHHHHHHHHHHHH-CCCCEEEEE
Confidence 5667888773322 23678999999999999999987 56777664 455677665 678876544
No 357
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=72.15 E-value=1.9 Score=39.08 Aligned_cols=58 Identities=19% Similarity=0.228 Sum_probs=47.3
Q ss_pred HHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchH
Q 018446 203 ARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVL 266 (355)
Q Consensus 203 A~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVL 266 (355)
.+...+...+++=|| |. -..+.+..+++. +++||+.==||-++-++.+|..+|||||-
T Consensus 120 ~~~i~~~~PD~iEiL--PG---i~p~iI~~i~~~-~~~PiIaGGlI~~~edv~~al~aGA~aVs 177 (192)
T 3kts_A 120 VALIQKVQPDCIELL--PG---IIPEQVQKMTQK-LHIPVIAGGLIETSEQVNQVIASGAIAVT 177 (192)
T ss_dssp HHHHHHHCCSEEEEE--CT---TCHHHHHHHHHH-HCCCEEEESSCCSHHHHHHHHTTTEEEEE
T ss_pred HHHHhhcCCCEEEEC--Cc---hhHHHHHHHHHh-cCCCEEEECCcCCHHHHHHHHHcCCeEEE
Confidence 344455677888777 22 246888999986 89999999999999999999999999984
No 358
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=72.06 E-value=20 Score=31.75 Aligned_cols=117 Identities=13% Similarity=0.019 Sum_probs=65.2
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhc--CCCCCeec-c------ccc-cCHH-----------HHHH
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSA--GVKCPLLC-K------EFI-VDAW-----------QIYY 256 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a--~v~lPVLr-K------DFI-Idpy-----------QI~e 256 (355)
+..+..+...+.|..+|-+..+. +..-+.+++..+++. ...+.+.. - +|. .|+- .|..
T Consensus 18 ~~~~~l~~~~~~G~~~vEl~~~~-~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~ 96 (294)
T 3vni_A 18 DYKYYIEKVAKLGFDILEIAASP-LPFYSDIQINELKACAHGNGITLTVGHGPSAEQNLSSPDPDIRKNAKAFYTDLLKR 96 (294)
T ss_dssp CHHHHHHHHHHHTCSEEEEESTT-GGGCCHHHHHHHHHHHHHTTCEEEEEECCCGGGCTTCSCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEecCcc-cCCcCHHHHHHHHHHHHHcCCeEEEeecCCCCcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 56666666666777777766543 212244444444331 01222221 0 121 1222 4777
Q ss_pred HHHcCCcchHH-HHh-c-------CC--------HHHHHHHHHHHHHcCCcEEEEeC---------CHHHHHHHhccCCC
Q 018446 257 ARTKGADAVLL-IAA-V-------LP--------DLDIRYMTKICKLLGLTALVEVH---------DEREMDRVLGIEGI 310 (355)
Q Consensus 257 Ar~~GADAVLL-Iaa-i-------L~--------~~~L~~L~~~A~~LGLeaLVEVH---------~~eELerAl~l~ga 310 (355)
|..+||+.|.. +.. . .+ -+.|.++.++|.+.|+...+|-| +.+++.+.++.-+.
T Consensus 97 a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~~~~l~~~v~~ 176 (294)
T 3vni_A 97 LYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFENYLINTAQEGVDFVKQVDH 176 (294)
T ss_dssp HHHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCTTTCSSCCSHHHHHHHHHHHCC
T ss_pred HHHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcccCcccCCHHHHHHHHHHcCC
Confidence 88899998853 111 1 11 13477888899999999999988 46677776653233
Q ss_pred eEEEe
Q 018446 311 ELIGI 315 (355)
Q Consensus 311 ~iIGI 315 (355)
+-+|+
T Consensus 177 ~~vg~ 181 (294)
T 3vni_A 177 NNVKV 181 (294)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 33444
No 359
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=71.94 E-value=5.3 Score=37.47 Aligned_cols=60 Identities=20% Similarity=0.257 Sum_probs=43.8
Q ss_pred CceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCH----HHHHHHHhcCCCCCeecc
Q 018446 176 LPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSF----ENLEAVRSAGVKCPLLCK 245 (355)
Q Consensus 176 ~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~----edL~~VR~a~v~lPVLrK 245 (355)
+..||+=+-- .| ..+..++++..++.||+|+.|++ |-||..+. +++++|.++ +++||+-=
T Consensus 77 rvpviaGvg~--~~------t~~ai~la~~a~~~Gadavlv~~-P~y~~~s~~~l~~~f~~va~a-~~lPiilY 140 (301)
T 3m5v_A 77 KVKVLAGAGS--NA------THEAVGLAKFAKEHGADGILSVA-PYYNKPTQQGLYEHYKAIAQS-VDIPVLLY 140 (301)
T ss_dssp SCEEEEECCC--SS------HHHHHHHHHHHHHTTCSEEEEEC-CCSSCCCHHHHHHHHHHHHHH-CSSCEEEE
T ss_pred CCeEEEeCCC--CC------HHHHHHHHHHHHHcCCCEEEEcC-CCCCCCCHHHHHHHHHHHHHh-CCCCEEEE
Confidence 5679987621 21 23678999999999999999987 56787774 456677775 68887643
No 360
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=71.68 E-value=4.7 Score=37.71 Aligned_cols=45 Identities=11% Similarity=0.165 Sum_probs=34.2
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCC-CCH----HHHHHHHhcCCCCCeec
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFK-GSF----ENLEAVRSAGVKCPLLC 244 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~-GS~----edL~~VR~a~v~lPVLr 244 (355)
+..++++..++.||+++.|++ |-||. -+. ++++.|.++ +++||+-
T Consensus 79 ~ai~la~~A~~~Gadavlv~~-P~y~~~~s~~~l~~~f~~va~a-~~lPiil 128 (293)
T 1w3i_A 79 DAIRLAKLSKDFDIVGIASYA-PYYYPRMSEKHLVKYFKTLCEV-SPHPVYL 128 (293)
T ss_dssp HHHHHHHHGGGSCCSEEEEEC-CCSCSSCCHHHHHHHHHHHHHH-CSSCEEE
T ss_pred HHHHHHHHHHhcCCCEEEEcC-CCCCCCCCHHHHHHHHHHHHhh-CCCCEEE
Confidence 677899999999999999997 66777 564 455577665 6777643
No 361
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=71.66 E-value=9.7 Score=35.42 Aligned_cols=111 Identities=13% Similarity=0.112 Sum_probs=74.1
Q ss_pred HHHHHcCceEEEEeccCCC-CCCCHH----HHHHHHhcCCC---CC-eeccccccCHHHHHHH----HHcCCcchHHHHh
Q 018446 204 RSYEKGGAACLSILTDEKY-FKGSFE----NLEAVRSAGVK---CP-LLCKEFIVDAWQIYYA----RTKGADAVLLIAA 270 (355)
Q Consensus 204 ~~Ye~~GAaaISVLTD~~f-F~GS~e----dL~~VR~a~v~---lP-VLrKDFIIdpyQI~eA----r~~GADAVLLIaa 270 (355)
+...+.||+.|.+.-.-.+ ..|.++ ++..++++ +. ++ ||--.+ +++-||..| ..+|||-|=--..
T Consensus 102 ~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a-~~~~~lKVIlEt~~-Lt~eei~~a~~ia~~aGADfVKTSTG 179 (239)
T 3ngj_A 102 KVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDA-SGKALTKVIIECCY-LTNEEKVEVCKRCVAAGAEYVKTSTG 179 (239)
T ss_dssp HHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHH-HTTSEEEEECCGGG-SCHHHHHHHHHHHHHHTCSEEECCCS
T ss_pred HHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHH-hcCCceEEEEecCC-CCHHHHHHHHHHHHHHCcCEEECCCC
Confidence 4455679999999877543 246654 66777765 32 33 344455 577899988 8899999877643
Q ss_pred cC----CHHHHHHHHHHHH-HcCCcEEEEeCCHHHHHHHhccCCCeEEEeeC
Q 018446 271 VL----PDLDIRYMTKICK-LLGLTALVEVHDEREMDRVLGIEGIELIGINN 317 (355)
Q Consensus 271 iL----~~~~L~~L~~~A~-~LGLeaLVEVH~~eELerAl~l~ga~iIGINN 317 (355)
.- +.++.+.|.+... .+|+-+===++|.+++...+++ ||+-||..+
T Consensus 180 f~~ggAt~~dv~lmr~~vg~~v~VKasGGIrt~~da~~~i~a-GA~riGtS~ 230 (239)
T 3ngj_A 180 FGTHGATPEDVKLMKDTVGDKALVKAAGGIRTFDDAMKMINN-GASRIGASA 230 (239)
T ss_dssp SSSCCCCHHHHHHHHHHHGGGSEEEEESSCCSHHHHHHHHHT-TEEEEEESC
T ss_pred CCCCCCCHHHHHHHHHhhCCCceEEEeCCCCCHHHHHHHHHh-cccceeccc
Confidence 32 3356666655541 2333333348999999999997 999999753
No 362
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=71.48 E-value=5 Score=38.64 Aligned_cols=61 Identities=16% Similarity=0.279 Sum_probs=43.4
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHH----HHHHHHhcCCCCCeecc
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFE----NLEAVRSAGVKCPLLCK 245 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~e----dL~~VR~a~v~lPVLrK 245 (355)
++..||+=+-- .| ..+..++++..++.||+++.|++ |-||..+.+ +++.|.++ +++||+-=
T Consensus 99 grvpViaGvg~--~s------t~eai~la~~A~~~Gadavlv~~-P~Y~~~s~~~l~~~f~~VA~a-~~lPiilY 163 (343)
T 2v9d_A 99 RRVPVLIGTGG--TN------ARETIELSQHAQQAGADGIVVIN-PYYWKVSEANLIRYFEQVADS-VTLPVMLY 163 (343)
T ss_dssp TSSCEEEECCS--SC------HHHHHHHHHHHHHHTCSEEEEEC-CSSSCCCHHHHHHHHHHHHHT-CSSCEEEE
T ss_pred CCCcEEEecCC--CC------HHHHHHHHHHHHhcCCCEEEECC-CCCCCCCHHHHHHHHHHHHHh-cCCCEEEE
Confidence 45678887722 11 23677899999999999999997 678877754 45577765 67886543
No 363
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=71.47 E-value=13 Score=33.40 Aligned_cols=127 Identities=13% Similarity=0.084 Sum_probs=77.6
Q ss_pred CceEEeEeeecCCCCCCCCCCCC--HHHHHHHHHHcCceEEEEeccCCCCC-CCHHHHHHHHhcCCCCCe--eccccccC
Q 018446 176 LPALIAEVKKASPSRGILREDFD--PVEIARSYEKGGAACLSILTDEKYFK-GSFENLEAVRSAGVKCPL--LCKEFIVD 250 (355)
Q Consensus 176 ~~aVIAEvKRaSPSkG~I~~~~D--p~~iA~~Ye~~GAaaISVLTD~~fF~-GS~edL~~VR~a~v~lPV--LrKDFIId 250 (355)
...+..|+|......|.-.+..+ ...+++...+.|.. +.-.|+ -+.+.|..+|+...++|+ |..+. -+
T Consensus 130 ~~~l~iEiK~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~------~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~-~~ 202 (272)
T 3ch0_A 130 KIQYNGEIKSTVEGDNIDHPNIALFCDLVVAEIKKAHIT------DRFTLQSFDVRALEYMHSQYPDIKLSYLVETK-GT 202 (272)
T ss_dssp SCEEEEEECCCGGGBTTTBCCHHHHHHHHHHHHHHTTCG------GGEEEEESCHHHHHHHHHHCTTSEEEEEECSS-CC
T ss_pred CceEEEEECCCcCcccccCccHHHHHHHHHHHHHHcCCC------CcEEEEeCCHHHHHHHHHHCCCCcEEEEecCC-CC
Confidence 46799999965432221111100 23456666666643 221221 257888999875455664 33322 12
Q ss_pred HHHHHHHHHcCC--cchHHHHhcCCHHHHHHHHHHHHHcCCcEEE-EeCCHHHHHHHhccCCCeEEEee
Q 018446 251 AWQIYYARTKGA--DAVLLIAAVLPDLDIRYMTKICKLLGLTALV-EVHDEREMDRVLGIEGIELIGIN 316 (355)
Q Consensus 251 pyQI~eAr~~GA--DAVLLIaaiL~~~~L~~L~~~A~~LGLeaLV-EVH~~eELerAl~l~ga~iIGIN 316 (355)
..+ .++..|+ |++-.-...+++ .+++.+++.|+.+.+ -|.+.+++++.+++ |++-|--|
T Consensus 203 ~~~--~~~~~~~~~~~i~~~~~~~~~----~~v~~~~~~Gl~v~~wTvn~~~~~~~l~~~-GvdgIiTD 264 (272)
T 3ch0_A 203 LKK--QLEKLSFTPAVYSPDVTLVSK----KDIDAAHKLGMRVIPWTVNTKEEIETLISL-GVDGIITD 264 (272)
T ss_dssp HHH--HHTTSSSCCSEEEEBGGGCCH----HHHHHHHHTTCEECCBCCCSHHHHHHHHHH-TCSEEEES
T ss_pred HHH--HHHHcCCCCcEEccchhhcCH----HHHHHHHHcCCEEEEeccCCHHHHHHHHHc-CCCEEEeC
Confidence 222 2455676 777665666664 688999999999876 47899999999987 88877544
No 364
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=71.33 E-value=3.9 Score=38.52 Aligned_cols=62 Identities=27% Similarity=0.346 Sum_probs=44.0
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHH----HHHHHHhcCCC-CCeeccc
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFE----NLEAVRSAGVK-CPLLCKE 246 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~e----dL~~VR~a~v~-lPVLrKD 246 (355)
++..||+=+--. | ..+..++++..++.||+++.|++ |-||..+.+ +++.|.++ ++ +||+-=+
T Consensus 79 grvpViaGvg~~--~------t~~ai~la~~A~~~Gadavlv~~-P~y~~~s~~~l~~~f~~va~a-~~~lPiilYn 145 (303)
T 2wkj_A 79 GKIKLIAHVGCV--S------TAESQQLAASAKRYGFDAVSAVT-PFYYPFSFEEHCDHYRAIIDS-ADGLPMVVYN 145 (303)
T ss_dssp TTSEEEEECCCS--S------HHHHHHHHHHHHHHTCSEEEEEC-CCSSCCCHHHHHHHHHHHHHH-HTTCCEEEEE
T ss_pred CCCcEEEecCCC--C------HHHHHHHHHHHHhCCCCEEEecC-CCCCCCCHHHHHHHHHHHHHh-CCCCCEEEEe
Confidence 456799866211 1 23577899999999999999997 678888754 44566665 67 8876544
No 365
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=71.28 E-value=8 Score=37.32 Aligned_cols=115 Identities=15% Similarity=0.163 Sum_probs=79.4
Q ss_pred HHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCe
Q 018446 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (355)
Q Consensus 163 F~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPV 242 (355)
...++++.. ....+..+.- |-+.. -+. .+++..++.|.. .+ |+.+-..+++.+..+|+. +++||
T Consensus 192 ~v~avr~a~---~~~~l~vDaN------~~~~~-~~a-~~~~~l~~~~i~---~i-EqP~~~~d~~~~~~l~~~-~~ipI 255 (393)
T 1wuf_A 192 FVEAVRKSF---PKLSLMADAN------SAYNR-EDF-LLLKELDQYDLE---MI-EQPFGTKDFVDHAWLQKQ-LKTRI 255 (393)
T ss_dssp HHHHHHTTC---TTSEEEEECT------TCCCG-GGH-HHHHTTGGGTCS---EE-ECCSCSSCSHHHHHHHTT-CSSEE
T ss_pred HHHHHHHHc---CCCEEEEECC------CCCCH-HHH-HHHHHHHhCCCe---EE-ECCCCCcCHHHHHHHHHh-CCCCE
Confidence 455665542 2345666652 21221 123 555666665533 33 445667889999999985 89999
Q ss_pred eccccccCHHHHHHHHHcC-CcchHH-HHhcCCHHHHHHHHHHHHHcCCcEEE
Q 018446 243 LCKEFIVDAWQIYYARTKG-ADAVLL-IAAVLPDLDIRYMTKICKLLGLTALV 293 (355)
Q Consensus 243 LrKDFIIdpyQI~eAr~~G-ADAVLL-IaaiL~~~~L~~L~~~A~~LGLeaLV 293 (355)
..-+-+.+.+++.+....| +|.|.+ +..+=+-.+...+.++|+..|+.+.+
T Consensus 256 a~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~ 308 (393)
T 1wuf_A 256 CLDENIRSVKDVEQAHSIGSCRAINLKLARVGGMSSALKIAEYCALNEILVWC 308 (393)
T ss_dssp EECTTCCSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHHHHHHHHHTTCEEEE
T ss_pred EECCCcCCHHHHHHHHHhCCCCEEEeChhhhCCHHHHHHHHHHHHHcCCeEEe
Confidence 9999999999999988888 588777 33333556778899999999999864
No 366
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=71.14 E-value=13 Score=36.58 Aligned_cols=93 Identities=16% Similarity=0.245 Sum_probs=70.0
Q ss_pred CCHHH---HHHHHHH-cCceEEEEeccCCCCCCCHHHHHHHHhcCC--CCCeeccc-cccCHHHHHHHHHcC-CcchHH-
Q 018446 197 FDPVE---IARSYEK-GGAACLSILTDEKYFKGSFENLEAVRSAGV--KCPLLCKE-FIVDAWQIYYARTKG-ADAVLL- 267 (355)
Q Consensus 197 ~Dp~~---iA~~Ye~-~GAaaISVLTD~~fF~GS~edL~~VR~a~v--~lPVLrKD-FIIdpyQI~eAr~~G-ADAVLL- 267 (355)
+++.+ +++..++ .+ |.-+ |+.+-..+++.+..+++. + ++||..-| +..+++++.+....| +|+|++
T Consensus 267 ~t~~~ai~~~~~L~~~~~---i~~i-EePl~~~d~~~~~~l~~~-~~~~ipIa~dEl~~~~~~~~~~~i~~~a~d~i~ik 341 (431)
T 2fym_A 267 FTSEEFTHFLEELTKQYP---IVSI-EDGLDESDWDGFAYQTKV-LGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIK 341 (431)
T ss_dssp ECHHHHHHHHHHHHHHSC---EEEE-ESCSCTTCHHHHHHHHHH-HTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC
T ss_pred CCHHHHHHHHHHHHHhCC---ceEE-ECCCCcccHHHHHHHHHH-hCCCCeEEeCCcccCCHHHHHHHHHhCCCCEEEEC
Confidence 45544 4455555 54 4434 555788999999999985 6 89999999 999999999998877 477766
Q ss_pred HHhcCCHHHHHHHHHHHHHcCCcEEEE
Q 018446 268 IAAVLPDLDIRYMTKICKLLGLTALVE 294 (355)
Q Consensus 268 IaaiL~~~~L~~L~~~A~~LGLeaLVE 294 (355)
+..+=+-.+...+.++|+..|+.+.+-
T Consensus 342 ~~~~GGite~~~i~~~A~~~g~~~~~~ 368 (431)
T 2fym_A 342 FNQIGSLTETLAAIKMAKDAGYTAVIS 368 (431)
T ss_dssp GGGTCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHCCCeEEEe
Confidence 334335567788999999999999873
No 367
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=71.06 E-value=9.3 Score=36.71 Aligned_cols=115 Identities=12% Similarity=0.087 Sum_probs=79.4
Q ss_pred HHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCe
Q 018446 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL 242 (355)
Q Consensus 163 F~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPV 242 (355)
...++++.. ....+..+.- |-+... +. .+++..++.+.. .-|+.+-..+++.+..+++. +.+||
T Consensus 192 ~v~avr~a~---~~~~l~vDaN------~~~~~~-~a-~~~~~l~~~~i~----~iEqP~~~~d~~~~~~l~~~-~~ipI 255 (386)
T 1wue_A 192 PVALIRQHF---PNLPLMVDAN------SAYTLA-DL-PQLQRLDHYQLA----MIEQPFAADDFLDHAQLQRE-LKTRI 255 (386)
T ss_dssp HHHHHHHHC---TTSCEEEECT------TCCCGG-GH-HHHHGGGGSCCS----CEECCSCTTCSHHHHHHHTT-CSSCE
T ss_pred HHHHHHHhC---CCCeEEEeCC------CCCCHH-HH-HHHHHHHhCCCe----EEeCCCCcccHHHHHHHHHh-cCCCE
Confidence 455666542 2345666652 212211 23 555666665532 33556677899999999985 89999
Q ss_pred eccccccCHHHHHHHHHcC-CcchHH-HHhcCCHHHHHHHHHHHHHcCCcEEE
Q 018446 243 LCKEFIVDAWQIYYARTKG-ADAVLL-IAAVLPDLDIRYMTKICKLLGLTALV 293 (355)
Q Consensus 243 LrKDFIIdpyQI~eAr~~G-ADAVLL-IaaiL~~~~L~~L~~~A~~LGLeaLV 293 (355)
..-+-+.+.+++.+....| +|.|.+ +..+=+-.+...+.++|+..|+.+.+
T Consensus 256 a~dE~~~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~i~~~A~~~gi~~~~ 308 (386)
T 1wue_A 256 CLDENIRSLKDCQVALALGSCRSINLKIPRVGGIHEALKIAAFCQENDLLVWL 308 (386)
T ss_dssp EECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEE
T ss_pred EeCCccCCHHHHHHHHHcCCCCEEEEchhhhCCHHHHHHHHHHHHHCCCeEEE
Confidence 9999999999999988777 677777 44443556778899999999999854
No 368
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=70.83 E-value=11 Score=35.23 Aligned_cols=116 Identities=16% Similarity=0.107 Sum_probs=77.0
Q ss_pred CCceEEeEeeecCCC---CCC-CCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHH----HHHhcCCCCCeeccc
Q 018446 175 GLPALIAEVKKASPS---RGI-LREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLE----AVRSAGVKCPLLCKE 246 (355)
Q Consensus 175 g~~aVIAEvKRaSPS---kG~-I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~----~VR~a~v~lPVLrKD 246 (355)
..+-||.|+=-.+|- .|. ....-++.+.|+.+.+.||+.|=|-.+.. -....+.+. .+++. +++||--.=
T Consensus 8 ~~~~iigEilN~Tpdsf~dg~~~~~~~~a~~~a~~~v~~GAdiIDIg~~s~-~~eE~~rv~~vi~~l~~~-~~~pisIDT 85 (271)
T 2yci_X 8 HMFIMIGERINGMFKDIREAILNKDPRPIQEWARRQAEKGAHYLDVNTGPT-ADDPVRVMEWLVKTIQEV-VDLPCCLDS 85 (271)
T ss_dssp CCCEEEEEEEETTSHHHHHHHHTTCCHHHHHHHHHHHHTTCSEEEEECCSC-SSCHHHHHHHHHHHHHHH-CCCCEEEEC
T ss_pred CCCEEEEEecCCChhhHHHhhhhCCHHHHHHHHHHHHHCCCCEEEEcCCcC-chhHHHHHHHHHHHHHHh-CCCeEEEeC
Confidence 457899999998883 222 22223467889999999999999998872 112244333 44553 578864322
Q ss_pred cccCHHHHHHHHHc--CCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeCC
Q 018446 247 FIVDAWQIYYARTK--GADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHD 297 (355)
Q Consensus 247 FIIdpyQI~eAr~~--GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH~ 297 (355)
+ ++-=+..|..+ |||-|.=|-+ + .+.+..++..+.++|. ++|=.|.
T Consensus 86 ~--~~~v~~aal~a~~Ga~iINdvs~-~-~d~~~~~~~~~a~~~~-~vv~m~~ 133 (271)
T 2yci_X 86 T--NPDAIEAGLKVHRGHAMINSTSA-D-QWKMDIFFPMAKKYEA-AIIGLTM 133 (271)
T ss_dssp S--CHHHHHHHHHHCCSCCEEEEECS-C-HHHHHHHHHHHHHHTC-EEEEESC
T ss_pred C--CHHHHHHHHHhCCCCCEEEECCC-C-ccccHHHHHHHHHcCC-CEEEEec
Confidence 2 56666677778 9987654443 2 3467889999999998 5555665
No 369
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=70.79 E-value=4.4 Score=39.93 Aligned_cols=116 Identities=11% Similarity=0.125 Sum_probs=82.8
Q ss_pred HHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCH---HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCC
Q 018446 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDP---VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVK 239 (355)
Q Consensus 163 F~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp---~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~ 239 (355)
...++++... ....|..+. +..+++ ..+++.+++.|...| |+.+-..+++.+..+|+. ++
T Consensus 217 ~v~avR~a~G--~d~~L~vDa----------N~~~~~~~A~~~~~~L~~~~i~~i----EeP~~~~d~~~~~~l~~~-~~ 279 (426)
T 4e4f_A 217 LFEAVRDKFG--FNEHLLHDM----------HHRLTPIEAARFGKSVEDYRLFWM----EDPTPAENQACFRLIRQH-TV 279 (426)
T ss_dssp HHHHHHHHHT--TSSEEEEEC----------TTCSCHHHHHHHHHHTGGGCCSEE----ECCSCCSSGGGGHHHHTT-CC
T ss_pred HHHHHHHHhC--CCCEEEEEC----------CCCCCHHHHHHHHHHHhhcCCCEE----ECCCChHHHHHHHHHHhc-CC
Confidence 3455665431 234566654 223344 456777888886655 445566789999999985 89
Q ss_pred CCeeccccccCHHHHHHHHHcC-CcchHHHHhcCC-HHHHHHHHHHHHHcCCcEEEEeCC
Q 018446 240 CPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVEVHD 297 (355)
Q Consensus 240 lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL~-~~~L~~L~~~A~~LGLeaLVEVH~ 297 (355)
+||..-+-+.++++..+....| +|.|.+=+.-++ -.+...+.++|+..|+.+ -.|+
T Consensus 280 iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k~~~~GGit~~~~ia~~A~~~gi~v--~~h~ 337 (426)
T 4e4f_A 280 TPIAVGEVFNSIWDCKQLIEEQLIDYIRTTITHAGGITGMRRIADFASLYQVRT--GSHG 337 (426)
T ss_dssp SCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEE--EECC
T ss_pred CCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEE--eeeC
Confidence 9999999999999999998877 588776555554 456778899999999984 5564
No 370
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=70.72 E-value=11 Score=33.48 Aligned_cols=109 Identities=21% Similarity=0.310 Sum_probs=65.6
Q ss_pred eEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccc-cCHHHHHH
Q 018446 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFI-VDAWQIYY 256 (355)
Q Consensus 178 aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFI-IdpyQI~e 256 (355)
.++.|+--.... ...-......+.+.+.|.. |--| -|+.++..+..++.. |+ |+| ||.--+..
T Consensus 124 ~l~lEitE~~~~----~~~~~~~~~l~~l~~~G~~---ialD--dfG~g~ssl~~L~~l----~~---d~iKiD~~~v~~ 187 (259)
T 3s83_A 124 ALKLEVTESDIM----RDPERAAVILKTLRDAGAG---LALD--DFGTGFSSLSYLTRL----PF---DTLKIDRYFVRT 187 (259)
T ss_dssp SEEEEEEHHHHH----HCHHHHHHHHHHHHHHTCE---EEEE--CC---CHHHHHHHHS----CC---CEEEECHHHHHH
T ss_pred eEEEEECCchhh----hCHHHHHHHHHHHHHCCCE---EEEE--CCCCCchhHHHHHhC----CC---CEEEECHHHHhh
Confidence 589999654321 1111123445667776742 2233 488888888888763 32 555 56544432
Q ss_pred HHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEE-eCCHHHHHHHhccCCCeEE
Q 018446 257 ARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVE-VHDEREMDRVLGIEGIELI 313 (355)
Q Consensus 257 Ar~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVE-VH~~eELerAl~l~ga~iI 313 (355)
. ..|.- ...-++.++.+|+++|+.+++| |.|.++++.+.++ |++.+
T Consensus 188 ~---~~~~~-------~~~~~~~i~~~a~~~g~~viaeGVEt~~~~~~l~~l-G~~~~ 234 (259)
T 3s83_A 188 M---GNNAG-------SAKIVRSVVKLGQDLDLEVVAEGVENAEMAHALQSL-GCDYG 234 (259)
T ss_dssp T---TTCHH-------HHHHHHHHHHHHHHTTCEEEECCCCSHHHHHHHHHH-TCCEE
T ss_pred h---hcCch-------HHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHhc-CCCEe
Confidence 1 11110 0123677899999999999998 8999999999887 87653
No 371
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=70.70 E-value=6 Score=38.81 Aligned_cols=91 Identities=14% Similarity=0.131 Sum_probs=69.1
Q ss_pred HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCC-CCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHH
Q 018446 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLD 276 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v-~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~ 276 (355)
.++++..++.|...| |+.+-..+++.+..+|+. + .+||..-+-+.++.++.+....| +|.|.+=+.-. +-.+
T Consensus 259 ~~~~~~l~~~~i~~i----EqP~~~~d~~~~~~l~~~-~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite 333 (441)
T 2hxt_A 259 IDWMRQLAEFDIAWI----EEPTSPDDVLGHAAIRQG-ITPVPVSTGEHTQNRVVFKQLLQAGAVDLIQIDAARVGGVNE 333 (441)
T ss_dssp HHHHHTTGGGCCSCE----ECCSCTTCHHHHHHHHHH-HTTSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTSSHHHH
T ss_pred HHHHHHHHhcCCCee----eCCCCHHHHHHHHHHHhh-CCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEeCcceeCCHHH
Confidence 446666667676643 455667899999999985 5 59999999999999999987776 68877744444 3456
Q ss_pred HHHHHHHHHHcCCcEEEEeCC
Q 018446 277 IRYMTKICKLLGLTALVEVHD 297 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVEVH~ 297 (355)
...+..+|+..|+.+. .|.
T Consensus 334 ~~~ia~~A~~~g~~~~--~h~ 352 (441)
T 2hxt_A 334 NLAILLLAAKFGVRVF--PHA 352 (441)
T ss_dssp HHHHHHHHHHTTCEEC--CCC
T ss_pred HHHHHHHHHHcCCeEE--Eec
Confidence 7788999999999863 564
No 372
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=70.51 E-value=3.2 Score=39.14 Aligned_cols=62 Identities=19% Similarity=0.209 Sum_probs=43.3
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCC------CCHHHHHHHHhcCCCCCeeccc
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFK------GSFENLEAVRSAGVKCPLLCKE 246 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~------GS~edL~~VR~a~v~lPVLrKD 246 (355)
++..||+=+-- .| ..+..++++..++.||+|+.|++ |-||. |=++++++|.++ +++||+-=+
T Consensus 82 gr~pviaGvg~--~~------t~~ai~la~~A~~~Gadavlv~~-P~y~~~~~s~~~l~~~f~~ia~a-~~lPiilYn 149 (307)
T 3s5o_A 82 KNRLLLAGSGC--ES------TQATVEMTVSMAQVGADAAMVVT-PCYYRGRMSSAALIHHYTKVADL-SPIPVVLYS 149 (307)
T ss_dssp TTSEEEEECCC--SS------HHHHHHHHHHHHHTTCSEEEEEC-CCTTGGGCCHHHHHHHHHHHHHH-CSSCEEEEE
T ss_pred CCCcEEEecCC--CC------HHHHHHHHHHHHHcCCCEEEEcC-CCcCCCCCCHHHHHHHHHHHHhh-cCCCEEEEe
Confidence 55678887621 11 23677899999999999999987 45664 235677778775 678876433
No 373
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=70.41 E-value=4.2 Score=36.10 Aligned_cols=74 Identities=12% Similarity=0.124 Sum_probs=50.2
Q ss_pred CHHHHHHHHHHcCce-EEEEeccCCCCCC-------CHHHHHHHHhcCCCCCeeccccccCH-HHHHHHHHcCCcchHHH
Q 018446 198 DPVEIARSYEKGGAA-CLSILTDEKYFKG-------SFENLEAVRSAGVKCPLLCKEFIVDA-WQIYYARTKGADAVLLI 268 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAa-aISVLTD~~fF~G-------S~edL~~VR~a~v~lPVLrKDFIIdp-yQI~eAr~~GADAVLLI 268 (355)
++.+.++.+... ++ .|-+++=+-+-++ .++.++.+|+. +++||+ =++.|.. -++.+...+|||+|.+-
T Consensus 144 t~~e~~~~~~~~-~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~-~~~pi~-~~GGI~~~e~i~~~~~~Gad~vivG 220 (248)
T 1geq_A 144 TPDERLKVIDDM-TTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRI-CRNKVA-VGFGVSKREHVVSLLKEGANGVVVG 220 (248)
T ss_dssp CCHHHHHHHHHH-CSSEEEEECCC-------CCCHHHHHHHHHHHHH-CSSCEE-EESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred CHHHHHHHHHhc-CCCeEEEEECCccCCCCCCCChhHHHHHHHHHhh-cCCCEE-EEeecCCHHHHHHHHHcCCCEEEEc
Confidence 456777888765 44 4444433222222 24577888875 689965 5899988 99999999999999987
Q ss_pred HhcCCH
Q 018446 269 AAVLPD 274 (355)
Q Consensus 269 aaiL~~ 274 (355)
-++...
T Consensus 221 sai~~~ 226 (248)
T 1geq_A 221 SALVKI 226 (248)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 777643
No 374
>4a3q_A Alanine racemase 1; isomerase, PLP-dependent enzymes; HET: PLP; 2.15A {Staphylococcus aureus} PDB: 3oo2_A
Probab=70.37 E-value=20 Score=34.82 Aligned_cols=106 Identities=16% Similarity=0.160 Sum_probs=73.5
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHH
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDI 277 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L 277 (355)
...++|+...++|+..+.|.| ++....+|+++.+.|+|.=-. +.+-++.++..++ ++..+=+.+++
T Consensus 46 g~~~va~~l~~~G~~~f~Va~--------~~Ea~~lr~aGi~~~ilvlg~-~~~~~~~~~~~~~-----i~~~V~s~~~l 111 (382)
T 4a3q_A 46 GSVKVARHLMENGATFFAVAT--------LDEAIELRMHGITAKILVLGV-LPAKDIDKAIQHR-----VALTVPSKQWL 111 (382)
T ss_dssp CHHHHHHHHHHTTCCEEEESS--------HHHHHHHHTTTCCSEEEECSC-CCGGGHHHHHHTT-----CBEEECCHHHH
T ss_pred CHHHHHHHHHHCCCCEEEEeE--------HHHHHHHHhCCCCCCEEEEeC-CCHHHHHHHHHcC-----CEEEECCHHHH
Confidence 356899999999999977754 788888888777888775432 3566677776643 24456677788
Q ss_pred HHHHHHHHHcCC---cEEEEeCC--------HHH-HHHH----hccCCCeEEEeeC
Q 018446 278 RYMTKICKLLGL---TALVEVHD--------ERE-MDRV----LGIEGIELIGINN 317 (355)
Q Consensus 278 ~~L~~~A~~LGL---eaLVEVH~--------~eE-LerA----l~l~ga~iIGINN 317 (355)
+.|.+.|.+.|. .++++|.+ .+| +..+ ..+++.++.||=-
T Consensus 112 ~~l~~~a~~~~~~~~~V~lkvDtGm~R~G~~~~e~~~~~~~~i~~~~~l~l~Gl~t 167 (382)
T 4a3q_A 112 KEAIKNISGEQEKKLWLHIKLDTGMGRLGIKDTNTYQEVIEIIQQYEQLVFEGVFT 167 (382)
T ss_dssp HHHHHTCCTTCCSCEEEEEEBCSSSSSSSBCCHHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred HHHHHHHHHcCCCceeEEEEECCCCCcCCCChHHHHHHHHHHHHhCCCceEEEEEE
Confidence 888888877664 67888865 222 4333 2345678888753
No 375
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=70.32 E-value=5.5 Score=37.12 Aligned_cols=62 Identities=23% Similarity=0.292 Sum_probs=44.2
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCH----HHHHHHHhcCCCCCeeccc
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSF----ENLEAVRSAGVKCPLLCKE 246 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~----edL~~VR~a~v~lPVLrKD 246 (355)
++..||+=+--. | ..+..++++..++.||+++.|++ |-||.-+. ++++.|.++ +++||+-=+
T Consensus 69 gr~pviaGvg~~--~------t~~ai~la~~a~~~Gadavlv~~-P~y~~~~~~~l~~~f~~ia~a-~~lPiilYn 134 (291)
T 3tak_A 69 KRIPIIAGTGAN--S------TREAIELTKAAKDLGADAALLVT-PYYNKPTQEGLYQHYKAIAEA-VELPLILYN 134 (291)
T ss_dssp TSSCEEEECCCS--S------HHHHHHHHHHHHHHTCSEEEEEC-CCSSCCCHHHHHHHHHHHHHH-CCSCEEEEE
T ss_pred CCCeEEEeCCCC--C------HHHHHHHHHHHHhcCCCEEEEcC-CCCCCCCHHHHHHHHHHHHHh-cCCCEEEEe
Confidence 456788866221 1 23677899999999999999987 56777774 456677765 688876443
No 376
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=70.32 E-value=4.4 Score=38.53 Aligned_cols=50 Identities=10% Similarity=0.254 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCcccc
Q 018446 274 DLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFEV 325 (355)
Q Consensus 274 ~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~Tfev 325 (355)
.+.|+.|.++|+++||..+.|++|...++.+.+ .++++-|-.+|+.++++
T Consensus 75 ~~gl~~l~~~~~~~Glp~~te~~d~~~~~~l~~--~vd~~kIgA~~~~n~~L 124 (292)
T 1o60_A 75 EEGLKIFQELKDTFGVKIITDVHEIYQCQPVAD--VVDIIQLPAFLARQTDL 124 (292)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECCSGGGHHHHHT--TCSEEEECGGGTTCHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHh--cCCEEEECcccccCHHH
Confidence 567888999999999999999999999999876 58999999999998873
No 377
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=70.30 E-value=24 Score=34.80 Aligned_cols=125 Identities=15% Similarity=0.213 Sum_probs=84.1
Q ss_pred HHHHHhhhhcCCCceEEeEeeec---CCCCCCCCC--------CCCHHHHH----HHHHHcCceEEEEeccCCCCCCCHH
Q 018446 164 IGALMAANQRTGLPALIAEVKKA---SPSRGILRE--------DFDPVEIA----RSYEKGGAACLSILTDEKYFKGSFE 228 (355)
Q Consensus 164 ~~aL~~~~~~~g~~aVIAEvKRa---SPSkG~I~~--------~~Dp~~iA----~~Ye~~GAaaISVLTD~~fF~GS~e 228 (355)
..+++..... +...+..++--. ++++|.... .+++.+++ +..++.+ |-- -|+.+-..+++
T Consensus 229 ~~Air~~G~~-g~v~l~vDan~~~~~~~~~~~y~~~~~~~~~~~~~a~~~~~~~~~~l~~y~---i~~-iEdPl~~~D~~ 303 (432)
T 2ptz_A 229 MEAIEEAGHR-GKFAICMDCAASETYDEKKQQYNLTFKSPEPTWVTAEQLRETYCKWAHDYP---IVS-IEDPYDQDDFA 303 (432)
T ss_dssp HHHHHHTTCT-TSCEEEEECCGGGGEETTTTEEETTTTSSSCCEECHHHHHHHHHHHHHHSC---EEE-EECCSCTTCHH
T ss_pred HHHHHHhCCc-CCcEEEEECcccccccccCceeEeeccccccCCCCHHHHHHHHHHHHHhCC---ceE-EECCCCcchHH
Confidence 5666633111 256788886322 122222211 12677777 4555555 333 36667889999
Q ss_pred HHHHHHhcCC--CCCeeccc-cccCHHHHHHHHHcC-CcchHH-HHhcCCHHHHHHHHHHHHHcCCcEEEE
Q 018446 229 NLEAVRSAGV--KCPLLCKE-FIVDAWQIYYARTKG-ADAVLL-IAAVLPDLDIRYMTKICKLLGLTALVE 294 (355)
Q Consensus 229 dL~~VR~a~v--~lPVLrKD-FIIdpyQI~eAr~~G-ADAVLL-IaaiL~~~~L~~L~~~A~~LGLeaLVE 294 (355)
.+..+++. + ++||.--| |+..++++.+....| +|+|++ +..+=+--+.....++|+..|+.+.+-
T Consensus 304 g~~~l~~~-~g~~ipI~gDe~~v~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~i~~lA~~~g~~v~~~ 373 (432)
T 2ptz_A 304 GFAGITEA-LKGKTQIVGDDLTVTNTERIKMAIEKKACNSLLLKINQIGTISEAIASSKLCMENGWSVMVS 373 (432)
T ss_dssp HHHHHHHH-TTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHh-cCCCCeEEecCcccCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEec
Confidence 99999985 6 89998888 578999999998887 567666 455445557788899999999999874
No 378
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=70.17 E-value=13 Score=36.88 Aligned_cols=93 Identities=15% Similarity=0.158 Sum_probs=70.4
Q ss_pred CCHHHHHHH----HHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeecccccc-CHHHHHHHHHcC-CcchHH-HH
Q 018446 197 FDPVEIARS----YEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIV-DAWQIYYARTKG-ADAVLL-IA 269 (355)
Q Consensus 197 ~Dp~~iA~~----Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFII-dpyQI~eAr~~G-ADAVLL-Ia 269 (355)
+++.+.... .++.+ .++ -|..+-..+++.+..+++. .++||.--|..+ .++++.++...| ||+|++ +.
T Consensus 273 ~t~~eai~~~~~~l~~y~--i~~--iEdPl~~dD~~g~~~l~~~-~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ikv~ 347 (436)
T 2al1_A 273 LTGPQLADLYHSLMKRYP--IVS--IEDPFAEDDWEAWSHFFKT-AGIQIVADDLTVTNPKRIATAIEKKAADALLLKVN 347 (436)
T ss_dssp BCHHHHHHHHHHHHHHSC--EEE--EECCSCTTCHHHHHHHHTT-CCSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHH
T ss_pred CCHHHHHHHHHHHHHhCC--cEE--EECCCCCcCHHHHHHHHhc-CCCeEEECCcccCCHHHHHHHHHhCCCCEEEechh
Confidence 466655443 34444 333 3666788999999999985 899999999754 899999998888 577776 55
Q ss_pred hcCCHHHHHHHHHHHHHcCCcEEEE
Q 018446 270 AVLPDLDIRYMTKICKLLGLTALVE 294 (355)
Q Consensus 270 aiL~~~~L~~L~~~A~~LGLeaLVE 294 (355)
.+=+--+.....++|+..|+.+.+-
T Consensus 348 qiGGitea~~ia~lA~~~g~~~~~s 372 (436)
T 2al1_A 348 QIGTLSESIKAAQDSFAAGWGVMVS 372 (436)
T ss_dssp HHCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred hcCCHHHHHHHHHHHHHcCCeEEEe
Confidence 5545567788899999999999883
No 379
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=70.12 E-value=8.4 Score=37.90 Aligned_cols=96 Identities=10% Similarity=0.004 Sum_probs=72.9
Q ss_pred CCCHHH---HHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCC--CCeeccccccCHHHHHHHHHcCCcchHH-HH
Q 018446 196 DFDPVE---IARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVK--CPLLCKEFIVDAWQIYYARTKGADAVLL-IA 269 (355)
Q Consensus 196 ~~Dp~~---iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~--lPVLrKDFIIdpyQI~eAr~~GADAVLL-Ia 269 (355)
.+++.+ +++..++.+.. .-|+.+-..+++.+..+++. +. +||..-|-+.+.+++.++...|+|+|.+ +.
T Consensus 232 ~~~~~~Ai~~~~~l~~~~i~----~iEqPl~~~d~~~~~~l~~~-~~~~ipIa~dE~~~~~~~~~~~i~~~~d~i~ik~~ 306 (415)
T 2p3z_A 232 SQDVNYATKLAHACAPFNLK----WIEECLPPQQYEGYRELKRN-APAGMMVTSGEHHGTLQSFRTLAETGIDIMQPDVG 306 (415)
T ss_dssp CCCHHHHHHHHHHHGGGTCC----EEECCSCTTCHHHHHHHHHH-SCTTCEEEECTTCCSHHHHHHHHHTTCSEECCCHH
T ss_pred CCCHHHHHHHHHHHhhcCCc----eEeCCCCcchHHHHHHHHHh-cCCCCcEEcCCCCCCHHHHHHHHHcCCCEEEeCcc
Confidence 345543 44555554422 23566777899999999985 66 8999999999999999998888999988 44
Q ss_pred hcCCHHHHHHHHHHHHHcCCcEEEEeCCH
Q 018446 270 AVLPDLDIRYMTKICKLLGLTALVEVHDE 298 (355)
Q Consensus 270 aiL~~~~L~~L~~~A~~LGLeaLVEVH~~ 298 (355)
.+=+-.+...+.++|+..|+.+.+ |..
T Consensus 307 ~~GGitea~~ia~lA~~~gi~v~~--h~~ 333 (415)
T 2p3z_A 307 WCGGLTTLVEIAALAKSRGQLVVP--HGS 333 (415)
T ss_dssp HHTCHHHHHHHHHHHHHTTCCBCC--CCC
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEe--cCh
Confidence 444556778899999999999886 664
No 380
>2qgh_A Diaminopimelate decarboxylase; lyase; HET: PLP LYS; 2.30A {Helicobacter pylori} PDB: 3c5q_A*
Probab=69.81 E-value=35 Score=32.90 Aligned_cols=84 Identities=14% Similarity=0.074 Sum_probs=61.8
Q ss_pred HHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeecc-ccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHH
Q 018446 201 EIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCK-EFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRY 279 (355)
Q Consensus 201 ~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrK-DFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~ 279 (355)
.+++.+.+.|+ .+-| .|...+..+|+++++.|.+.= =....+-++.+|..+|.+. ..+=+.++++.
T Consensus 72 ~v~~~l~~~G~-g~~v--------as~~E~~~~~~~G~~~~~i~~~g~~k~~~~i~~a~~~gv~~----i~vds~~el~~ 138 (425)
T 2qgh_A 72 SILSLLAHLES-GADC--------VSIGEIQRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILF----LNVESFMELKT 138 (425)
T ss_dssp HHHHHHHHTTC-EEEE--------SSHHHHHHHHHTTCCGGGEEECCTTCCHHHHHHHHHTTCSE----EEECSHHHHHH
T ss_pred HHHHHHHHcCC-eEEE--------eCHHHHHHHHHcCCChhHEEEcCCCCCHHHHHHHHHCCCCE----EEeCCHHHHHH
Confidence 68999988887 7655 467889999987666554432 2234678899999888642 25566778999
Q ss_pred HHHHHHHcC--CcEEEEeCC
Q 018446 280 MTKICKLLG--LTALVEVHD 297 (355)
Q Consensus 280 L~~~A~~LG--LeaLVEVH~ 297 (355)
|.+.|.+.| ..+++.|.+
T Consensus 139 l~~~a~~~~~~~~v~lrvn~ 158 (425)
T 2qgh_A 139 IETIAQSLGIKARISIRINP 158 (425)
T ss_dssp HHHHHHHHTCCEEEEEEBCC
T ss_pred HHHHHHhcCCCceEEEEEeC
Confidence 988988877 568999974
No 381
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=69.76 E-value=4.7 Score=38.91 Aligned_cols=76 Identities=20% Similarity=0.131 Sum_probs=53.3
Q ss_pred CHHHHHHHHHHcCceEEEEeccC-------CCCCCCHHHHHHHHhcC------CC---CCeeccccccCHHHHHHHHHcC
Q 018446 198 DPVEIARSYEKGGAACLSILTDE-------KYFKGSFENLEAVRSAG------VK---CPLLCKEFIVDAWQIYYARTKG 261 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~-------~fF~GS~edL~~VR~a~------v~---lPVLrKDFIIdpyQI~eAr~~G 261 (355)
++. -|+...+.||++|.|=+-. .+-...++.|..++++. +. +||+.-==|-++-++.+|..+|
T Consensus 221 t~e-~a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kalalG 299 (393)
T 2qr6_A 221 DYT-TALHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKAIACG 299 (393)
T ss_dssp SHH-HHHHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHHHT
T ss_pred CHH-HHHHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHHcC
Confidence 344 5777788999999993200 11123456666665530 23 8999988888999999999999
Q ss_pred CcchHHHHhcCCH
Q 018446 262 ADAVLLIAAVLPD 274 (355)
Q Consensus 262 ADAVLLIaaiL~~ 274 (355)
||+|.+=-++|..
T Consensus 300 A~~V~iG~~~l~~ 312 (393)
T 2qr6_A 300 ADAVVLGSPLARA 312 (393)
T ss_dssp CSEEEECGGGGGS
T ss_pred CCEEEECHHHHcC
Confidence 9999876665543
No 382
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=69.42 E-value=7.7 Score=37.82 Aligned_cols=71 Identities=24% Similarity=0.167 Sum_probs=51.3
Q ss_pred HHHHHHHHcCceEEEEeccC-----------------------CCCC--C--CHHHHHHHHhcCC-CCCeeccccccCHH
Q 018446 201 EIARSYEKGGAACLSILTDE-----------------------KYFK--G--SFENLEAVRSAGV-KCPLLCKEFIVDAW 252 (355)
Q Consensus 201 ~iA~~Ye~~GAaaISVLTD~-----------------------~fF~--G--S~edL~~VR~a~v-~lPVLrKDFIIdpy 252 (355)
+.|+..+++||++|.|---. .+|. | ...-|..++++ + ++||+.-==|-++.
T Consensus 202 ~~A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~-~~~ipvia~GGI~~~~ 280 (368)
T 3vkj_A 202 ETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYS-VPDSFLVGSGGIRSGL 280 (368)
T ss_dssp HHHHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHH-STTCEEEEESSCCSHH
T ss_pred HHHHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhccccccccccHHHHHHHHHHH-cCCCcEEEECCCCCHH
Confidence 57889999999999983110 0111 1 12456677765 4 58999988899999
Q ss_pred HHHHHHHcCCcchHHHHhcC
Q 018446 253 QIYYARTKGADAVLLIAAVL 272 (355)
Q Consensus 253 QI~eAr~~GADAVLLIaaiL 272 (355)
.+.+|.++|||+|.+=-.+|
T Consensus 281 d~~kal~lGA~~v~ig~~~l 300 (368)
T 3vkj_A 281 DAAKAIALGADIAGMALPVL 300 (368)
T ss_dssp HHHHHHHHTCSEEEECHHHH
T ss_pred HHHHHHHcCCCEEEEcHHHH
Confidence 99999999999998744443
No 383
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=69.34 E-value=8.1 Score=37.09 Aligned_cols=135 Identities=22% Similarity=0.274 Sum_probs=77.5
Q ss_pred CCccHHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEE------EEeccCCC--CCCCH-HH
Q 018446 159 PARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACL------SILTDEKY--FKGSF-EN 229 (355)
Q Consensus 159 p~rdF~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaI------SVLTD~~f--F~GS~-ed 229 (355)
.++.|..+++. ....|+.-.|..|-- -+.+--..+. +|+..- +||--.+| |.|+. +-
T Consensus 134 ~t~~~v~a~~g------~~~~i~~TRKt~Pgl-------r~l~kyAv~~-GGg~nHR~gL~d~vlikdNHi~~~G~i~~A 199 (298)
T 3gnn_A 134 ATRQYVDRIAD------TRARILDTRKTLPGL-------RLAQKYAVRV-GGGANQRLALYAGILIKENHIAAAGGVGEA 199 (298)
T ss_dssp HHHHHHHHTTT------SSCCEECCSCCCTTC-------HHHHHHHHHH-TTCCCC-------------------CHHHH
T ss_pred HHHHHHHHhCC------CCeEEEEecCCCcch-------HHHHHhhHHh-cCccceecCCCcEEEEeHHHHHHcCCHHHH
Confidence 34566666643 246788888877742 1222222333 444211 23322222 44555 44
Q ss_pred HHHHHhcCCCCC--eeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeC---CHHHHHHH
Q 018446 230 LEAVRSAGVKCP--LLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRV 304 (355)
Q Consensus 230 L~~VR~a~v~lP--VLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH---~~eELerA 304 (355)
++.+|+.....| |.+.++ -|+.+|..+|||.|+| .-.+.+++++.++.. .=.+.+|+. |++.+...
T Consensus 200 v~~~r~~~p~~~ieVEvdtl----de~~eAl~aGaD~I~L--Dn~~~~~l~~av~~i---~~~v~ieaSGGI~~~~i~~~ 270 (298)
T 3gnn_A 200 LDAAFALNAEVPVQIEVETL----DQLRTALAHGARSVLL--DNFTLDMMRDAVRVT---EGRAVLEVSGGVNFDTVRAI 270 (298)
T ss_dssp HHHHHHHC--CCCEEEESSH----HHHHHHHHTTCEEEEE--ESCCHHHHHHHHHHH---TTSEEEEEESSCSTTTHHHH
T ss_pred HHHHHHhCCCCCEEEEeCCH----HHHHHHHHcCCCEEEE--CCCCHHHHHHHHHHh---CCCCeEEEEcCCCHHHHHHH
Confidence 566776422344 455555 4899999999999887 446666777666544 457899985 67777777
Q ss_pred hccCCCeEEEeeC
Q 018446 305 LGIEGIELIGINN 317 (355)
Q Consensus 305 l~l~ga~iIGINN 317 (355)
... |+++|+|-.
T Consensus 271 a~t-GVD~isvG~ 282 (298)
T 3gnn_A 271 AET-GVDRISIGA 282 (298)
T ss_dssp HHT-TCSEEECGG
T ss_pred HHc-CCCEEEECC
Confidence 775 999999865
No 384
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=69.22 E-value=14 Score=36.69 Aligned_cols=94 Identities=14% Similarity=0.150 Sum_probs=69.3
Q ss_pred CCHHHHHHHHH----HcCceEEEEeccCCCCCCCHHHHHHHHhcCC--CCCeeccccccC-HHHHHHHHHcC-CcchHH-
Q 018446 197 FDPVEIARSYE----KGGAACLSILTDEKYFKGSFENLEAVRSAGV--KCPLLCKEFIVD-AWQIYYARTKG-ADAVLL- 267 (355)
Q Consensus 197 ~Dp~~iA~~Ye----~~GAaaISVLTD~~fF~GS~edL~~VR~a~v--~lPVLrKDFIId-pyQI~eAr~~G-ADAVLL- 267 (355)
+++.+..+.|. +.+ |-- -|..+-..+++.+..+++. + ++||.--|..+. ++++.++...| +|+|++
T Consensus 261 ~t~~eai~~~~~ll~~y~---i~~-IEdPl~~dD~e~~~~L~~~-~g~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iK 335 (417)
T 3qn3_A 261 FSSEALIERYVELCAKYP---ICS-IEDGLAENDFEGWIKLTEK-LGNKIQLVGDDLFVTNEDILREGIIKKMANAVLIK 335 (417)
T ss_dssp ECHHHHHHHHHHHHHHSC---EEE-EESSSCTTCHHHHHHHHHH-HTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEEC
T ss_pred cCHHHHHHHHHHHHhhcc---eeE-EecCCCcccHHHHHHHHHh-hCCCCceecCCcccCCHHHHHHHHHhCCCCEEEec
Confidence 34665555444 344 333 3555778999999999985 4 699999999998 99999987766 677776
Q ss_pred HHhcCCHHHHHHHHHHHHHcCCcEEEEe
Q 018446 268 IAAVLPDLDIRYMTKICKLLGLTALVEV 295 (355)
Q Consensus 268 IaaiL~~~~L~~L~~~A~~LGLeaLVEV 295 (355)
+..+=+--+.....++|+..|+.+.|--
T Consensus 336 v~qiGGiTea~kia~lA~~~G~~v~vsh 363 (417)
T 3qn3_A 336 PNQIGTITQTMRTVRLAQRNNYKCVMSH 363 (417)
T ss_dssp HHHHCSHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHcCCeEEEeC
Confidence 3344344577788999999999999843
No 385
>1xfc_A Alanine racemase; alpha-beta barrel, beta-structure for C-terminal domain, INT aldimine form, isomerase; HET: PLP; 1.90A {Mycobacterium tuberculosis}
Probab=69.17 E-value=22 Score=33.73 Aligned_cols=104 Identities=20% Similarity=0.215 Sum_probs=71.5
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIR 278 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~ 278 (355)
..++++.+.+.|+..+.|. +.+.+..+|+++++.|||.=-. ..+-++.++..+| ++..+=+.++++
T Consensus 50 ~~~i~~~l~~~G~~~~~va--------s~~Ea~~~~~~G~~~~Il~~g~-~~~~~~~~~~~~~-----i~~~vds~~~l~ 115 (384)
T 1xfc_A 50 ATRVAQTALGAGAAELGVA--------TVDEALALRADGITAPVLAWLH-PPGIDFGPALLAD-----VQVAVSSLRQLD 115 (384)
T ss_dssp HHHHHHHHHHTTCCEEEES--------CHHHHHHHHHTTCCSCEEECCC-CTTCCCHHHHHTT-----CEEEECSHHHHH
T ss_pred hHHHHHHHHHCCCCEEEEe--------EHHHHHHHHhcCCCCCEEEEcC-CCHHHHHHHHHcC-----cEEEECCHHHHH
Confidence 4579999888998887664 5677888888777667773222 3344566666654 245666778899
Q ss_pred HHHHHHHHcC--CcEEEEeCCH-----------HHHHHHh----ccCCCeEEEee
Q 018446 279 YMTKICKLLG--LTALVEVHDE-----------REMDRVL----GIEGIELIGIN 316 (355)
Q Consensus 279 ~L~~~A~~LG--LeaLVEVH~~-----------eELerAl----~l~ga~iIGIN 316 (355)
.|.+.|.++| +.++++|.+- +|+..++ .+++.++.|+-
T Consensus 116 ~l~~~a~~~~~~~~V~l~vdtG~~R~G~~~~~~~~~~~~~~~i~~~~~l~l~Gl~ 170 (384)
T 1xfc_A 116 ELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLM 170 (384)
T ss_dssp HHHHHHHHHCCCEEEEEEBCSSCCSSSBCTTTHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred HHHHHHHhcCCceEEEEEEECCCCccCCCcCcHHHHHHHHHHHHhCCCCcEEEEE
Confidence 9989998877 5688888752 5554333 34577888883
No 386
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=68.86 E-value=3 Score=38.55 Aligned_cols=87 Identities=6% Similarity=-0.075 Sum_probs=63.4
Q ss_pred CCCHH-HHHHHHHHcCceEEEEeccC----CCCCCCHHHHHHHHhcCC----CCCeeccccccCHHHHHHHHHc--CCcc
Q 018446 196 DFDPV-EIARSYEKGGAACLSILTDE----KYFKGSFENLEAVRSAGV----KCPLLCKEFIVDAWQIYYARTK--GADA 264 (355)
Q Consensus 196 ~~Dp~-~iA~~Ye~~GAaaISVLTD~----~fF~GS~edL~~VR~a~v----~lPVLrKDFIIdpyQI~eAr~~--GADA 264 (355)
++|+. ++++.|++. |..|-| |+- .+-+=+++.++.++++ + ++||..-==|-++-++.+.... |||+
T Consensus 156 ~~~~~~e~a~~~~~~-a~~il~-t~i~~dG~~~G~d~eli~~l~~~-~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~g 232 (260)
T 2agk_A 156 DLELNADTFRELRKY-TNEFLI-HAADVEGLCGGIDELLVSKLFEW-TKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVD 232 (260)
T ss_dssp EEEESHHHHHHHTTT-CSEEEE-EC-------CCCCHHHHHHHHHH-HTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEE
T ss_pred CccHHHHHHHHHHHh-cCEEEE-EeeccccCcCCCCHHHHHHHHHh-hcccCCceEEEeCCCCCHHHHHHHHHhcCCCCE
Confidence 45788 999999999 998887 442 2333368888999886 7 9999998888899999999988 9999
Q ss_pred hHHHHhc--C-CH-HHHHHHHHHHH
Q 018446 265 VLLIAAV--L-PD-LDIRYMTKICK 285 (355)
Q Consensus 265 VLLIaai--L-~~-~~L~~L~~~A~ 285 (355)
|++=-++ . ++ -.+.++.++.+
T Consensus 233 vivg~al~l~~g~~~~~~~~~~~~~ 257 (260)
T 2agk_A 233 LTFGSSLDIFGGNLVKFEDCCRWNE 257 (260)
T ss_dssp EECCTTBGGGTCSSBCHHHHHHHHH
T ss_pred EEeeCCHHHcCCCCCCHHHHHHHHH
Confidence 8765553 2 22 23445554443
No 387
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=68.85 E-value=10 Score=37.00 Aligned_cols=74 Identities=18% Similarity=0.101 Sum_probs=56.6
Q ss_pred HHHHHHHHHHcCceEEEEecc---CCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcCCH
Q 018446 199 PVEIARSYEKGGAACLSILTD---EKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLPD 274 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD---~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL~~ 274 (355)
..++|+..++.|++.|.|-.- +..+. .+ +..+|++ +++||+.--=| ++.+..++...| ||+|.+-=++|.+
T Consensus 268 ~~~la~~l~~~Gvd~i~v~~~~~~~~~~~--~~-~~~ir~~-~~iPvi~~G~i-t~~~a~~~l~~g~aD~V~igR~~l~~ 342 (379)
T 3aty_A 268 TKHLCKKIEPLSLAYLHYLRGDMVNQQIG--DV-VAWVRGS-YSGVKISNLRY-DFEEADQQIREGKVDAVAFGAKFIAN 342 (379)
T ss_dssp HHHHHHHHGGGCCSEEEEECSCTTSCCCC--CH-HHHHHTT-CCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHC
T ss_pred HHHHHHHHHHhCCCEEEEcCCCcCCCCcc--HH-HHHHHHH-CCCcEEEECCC-CHHHHHHHHHcCCCeEEEecHHHHhC
Confidence 567899999999999999751 11122 25 8899986 89999887666 999999999998 9999886666654
Q ss_pred HHH
Q 018446 275 LDI 277 (355)
Q Consensus 275 ~~L 277 (355)
-+|
T Consensus 343 P~l 345 (379)
T 3aty_A 343 PDL 345 (379)
T ss_dssp TTH
T ss_pred cHH
Confidence 343
No 388
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=68.61 E-value=7.5 Score=37.81 Aligned_cols=90 Identities=14% Similarity=0.152 Sum_probs=70.7
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcCC-HHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVLP-DLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL~-~~~ 276 (355)
...+++.+++.|...| |+..-..+++.+..+|+. +++||..-+-+.++++..+....| +|.|.+=+.-.+ -.+
T Consensus 226 A~~~~~~L~~~~i~~i----EeP~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~d~~~~GGit~ 300 (400)
T 4dxk_A 226 AMQIAKALTPYQTFWH----EDPIKMDSLSSLTRYAAV-SPAPISASETLGSRWAFRDLLETGAAGVVMLDISWCGGLSE 300 (400)
T ss_dssp HHHHHHHTGGGCCSEE----ECCBCTTSGGGHHHHHHH-CSSCEEECTTCCHHHHHHHHHHTTCCCEEEECTTTTTHHHH
T ss_pred HHHHHHHHhhcCCCEE----EcCCCcccHHHHHHHHHh-CCCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHH
Confidence 3456778888775544 344555789999999986 899999999999999999998887 688777555554 457
Q ss_pred HHHHHHHHHHcCCcEEE
Q 018446 277 IRYMTKICKLLGLTALV 293 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLV 293 (355)
...+..+|+..|+.+.+
T Consensus 301 ~~kia~~A~~~gi~~~~ 317 (400)
T 4dxk_A 301 ARKIASMAEAWHLPVAP 317 (400)
T ss_dssp HHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHcCCEEEe
Confidence 77889999999999764
No 389
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=68.60 E-value=21 Score=34.08 Aligned_cols=128 Identities=19% Similarity=0.285 Sum_probs=72.6
Q ss_pred HHHHHHcCceEEEEecc----------------CCCCCCCHHH--------HHHHHhcCC--CCCeecc----cc---cc
Q 018446 203 ARSYEKGGAACLSILTD----------------EKYFKGSFEN--------LEAVRSAGV--KCPLLCK----EF---IV 249 (355)
Q Consensus 203 A~~Ye~~GAaaISVLTD----------------~~fF~GS~ed--------L~~VR~a~v--~lPVLrK----DF---II 249 (355)
|+...++|+++|=+.-- ..-|+||+++ +++||++ + +.||..| || ..
T Consensus 158 A~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~a-vG~d~pV~vRls~~~~~~~g~ 236 (349)
T 3hgj_A 158 ARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREV-VPRELPLFVRVSATDWGEGGW 236 (349)
T ss_dssp HHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH-SCTTSCEEEEEESCCCSTTSC
T ss_pred HHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHH-hcCCceEEEEeccccccCCCC
Confidence 44445678888766432 2357899764 5567775 5 6787553 21 12
Q ss_pred CH---HH-HHHHHHcCCcchHHHHhcC---------CHHHHHHHHHHHHHcCCcEEEE--eCCHHHHHHHhccCC-CeEE
Q 018446 250 DA---WQ-IYYARTKGADAVLLIAAVL---------PDLDIRYMTKICKLLGLTALVE--VHDEREMDRVLGIEG-IELI 313 (355)
Q Consensus 250 dp---yQ-I~eAr~~GADAVLLIaaiL---------~~~~L~~L~~~A~~LGLeaLVE--VH~~eELerAl~l~g-a~iI 313 (355)
+. .+ +.....+|+|.|=+...-. +...+..+..+.+..++-.+.- ++|.+++++++.. | +++|
T Consensus 237 ~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~-G~aD~V 315 (349)
T 3hgj_A 237 SLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQA-GSADLV 315 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHT-TSCSEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHC-CCceEE
Confidence 22 22 2333467999887764211 1123444444555566544332 4789999999986 6 9999
Q ss_pred EeeCCCCCccccChhhHHhhhcc
Q 018446 314 GINNRNLETFEVDNSNTKKLLEG 336 (355)
Q Consensus 314 GINNRdL~TfevDl~~t~~L~~~ 336 (355)
++- |- |=-|++-..++...
T Consensus 316 ~iG-R~---~lanPdl~~k~~~~ 334 (349)
T 3hgj_A 316 LLG-RV---LLRDPYFPLRAAKA 334 (349)
T ss_dssp EES-TH---HHHCTTHHHHHHHH
T ss_pred Eec-HH---HHhCchHHHHHHHH
Confidence 985 32 22355555555443
No 390
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=68.52 E-value=7.2 Score=35.97 Aligned_cols=71 Identities=21% Similarity=0.146 Sum_probs=51.3
Q ss_pred CCHHHHHHHHHHcCc-----eEEEEeccCCCCCCCHHHHHHHHhcCC-CCCeeccccccCHHHHHHHHHcCCcchHHHHh
Q 018446 197 FDPVEIARSYEKGGA-----ACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIAA 270 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GA-----aaISVLTD~~fF~GS~edL~~VR~a~v-~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaa 270 (355)
.|| +.++.|.+.|+ .-+=... .--.+..+.++.+|+. + ++||..===|=++-|+.+... |||+|.+=-+
T Consensus 146 ~~~-e~~~~~a~~g~~~l~~~~Vyl~~--~G~~~~~~~i~~i~~~-~~~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVGSa 220 (234)
T 2f6u_A 146 IDK-ELAASYALVGEKLFNLPIIYIEY--SGTYGNPELVAEVKKV-LDKARLFYGGGIDSREKAREMLR-YADTIIVGNV 220 (234)
T ss_dssp CCH-HHHHHHHHHHHHTTCCSEEEEEC--TTSCCCHHHHHHHHHH-CSSSEEEEESCCCSHHHHHHHHH-HSSEEEECHH
T ss_pred CCH-HHHHHHHHhhhhhcCCCEEEEeC--CCCcchHHHHHHHHHh-CCCCCEEEEecCCCHHHHHHHHh-CCCEEEEChH
Confidence 377 88999998887 2222221 2347889999999986 7 899776544556788888877 9999987555
Q ss_pred cC
Q 018446 271 VL 272 (355)
Q Consensus 271 iL 272 (355)
+.
T Consensus 221 ~v 222 (234)
T 2f6u_A 221 IY 222 (234)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 391
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=68.45 E-value=49 Score=31.08 Aligned_cols=117 Identities=19% Similarity=0.193 Sum_probs=86.9
Q ss_pred CCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHh------
Q 018446 197 FDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA------ 270 (355)
Q Consensus 197 ~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaa------ 270 (355)
-||+..|..-+++||+.|-|---+.--.=..+|+..+|+. +..|+ +=.--..+-.+.-|...--|.|.|..-
T Consensus 25 Pdpv~aA~~ae~aGAdgITvHlReDrRHI~d~Dv~~L~~~-~~~~l-NlE~a~t~emi~ia~~~kP~~vtLVPE~r~e~T 102 (243)
T 1m5w_A 25 PDPVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQT-LDTRM-NLEMAVTEEMLAIAVETKPHFCCLVPEKRQEVT 102 (243)
T ss_dssp SCHHHHHHHHHTTTCSEEEEECCTTCSSSCHHHHHHHHHH-CSSEE-EEEECSSHHHHHHHHHHCCSEEEECCCCSSCSS
T ss_pred CCHHHHHHHHHHcCCCEEEeCCCCCcccCCHHHHHHHHHh-cCCCE-EeccCCCHHHHHHHHHcCCCEEEECCCCCCCcC
Confidence 3899999999999999999988888888889999999985 55442 333345666777888888888877653
Q ss_pred ------cC-CHHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHhccCCCeEEEee
Q 018446 271 ------VL-PDLDIRYMTKICKLLGLTALVEVH-DEREMDRVLGIEGIELIGIN 316 (355)
Q Consensus 271 ------iL-~~~~L~~L~~~A~~LGLeaLVEVH-~~eELerAl~l~ga~iIGIN 316 (355)
+. ..+.|+..++..+..|..+=+=+. +.+.++.|..+ ||+.|=+-
T Consensus 103 TegGldv~~~~~~l~~~i~~L~~~GIrVSLFIDpd~~qi~aA~~~-GA~~IELh 155 (243)
T 1m5w_A 103 TEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQIKAAAEV-GAPFIEIH 155 (243)
T ss_dssp CCSCCCSGGGHHHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHT-TCSEEEEE
T ss_pred CCcchhHHhhHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHh-CcCEEEEe
Confidence 22 234677777888888887655553 77777888776 88777543
No 392
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=68.36 E-value=10 Score=35.81 Aligned_cols=107 Identities=15% Similarity=0.177 Sum_probs=71.9
Q ss_pred HHHHHHHcCceEEEEeccCCCCCC---CHHHHHHHHhcCCCCCe---ec---cccccCHH-------HHHHHHHcCCcch
Q 018446 202 IARSYEKGGAACLSILTDEKYFKG---SFENLEAVRSAGVKCPL---LC---KEFIVDAW-------QIYYARTKGADAV 265 (355)
Q Consensus 202 iA~~Ye~~GAaaISVLTD~~fF~G---S~edL~~VR~a~v~lPV---Lr---KDFIIdpy-------QI~eAr~~GADAV 265 (355)
=|..-+++||+=|=.++.- .-+| |+..++.+++. +++|| +| .||..++. .|..++.+|||+|
T Consensus 13 ~a~~A~~~GAdRIELc~~L-~~GGlTPS~g~i~~~~~~-~~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGv 90 (256)
T 1twd_A 13 CALTAQQNGADRVELCAAP-KEGGLTPSLGVLKSVRQR-VTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGL 90 (256)
T ss_dssp HHHHHHHTTCSEEEECBCG-GGTCBCCCHHHHHHHHHH-CCSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHcCCCEEEEcCCc-ccCCCCCCHHHHHHHHHH-cCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEE
Confidence 4555667899999988763 3344 78999999986 88985 44 49999965 4567999999998
Q ss_pred HHHH----hcCCHHHHHHHHHHHHHcCCcEEE-----EeCCHHH-HHHHhccCCCeEE
Q 018446 266 LLIA----AVLPDLDIRYMTKICKLLGLTALV-----EVHDERE-MDRVLGIEGIELI 313 (355)
Q Consensus 266 LLIa----aiL~~~~L~~L~~~A~~LGLeaLV-----EVH~~eE-LerAl~l~ga~iI 313 (355)
.+=+ .-++.+.++.|++.|. ||.+-+ ++.|..+ ++...++ |++=|
T Consensus 91 V~G~Lt~dg~iD~~~~~~Li~~a~--~~~vTFHRAfD~~~d~~~ale~L~~l-G~~rI 145 (256)
T 1twd_A 91 VTGVLDVDGNVDMPRMEKIMAAAG--PLAVTFHRAFDMCANPLYTLNNLAEL-GIARV 145 (256)
T ss_dssp EECCBCTTSSBCHHHHHHHHHHHT--TSEEEECGGGGGCSCHHHHHHHHHHH-TCCEE
T ss_pred EEeeECCCCCcCHHHHHHHHHHhC--CCcEEEECchhccCCHHHHHHHHHHc-CCCEE
Confidence 7621 2256678899998886 555322 2344444 4444554 55433
No 393
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=68.35 E-value=5 Score=37.48 Aligned_cols=61 Identities=21% Similarity=0.248 Sum_probs=43.6
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCH----HHHHHHHhcCCCCCeecc
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSF----ENLEAVRSAGVKCPLLCK 245 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~----edL~~VR~a~v~lPVLrK 245 (355)
++..||+=+-- .| ..+..++++..++.||+++.|++ |-||..+. ++.+.|.++ +++||+-=
T Consensus 70 grvpviaGvg~--~~------t~~ai~la~~a~~~Gadavlv~~-P~y~~~~~~~l~~~f~~ia~a-~~lPiilY 134 (292)
T 3daq_A 70 KRVPVIAGTGT--ND------TEKSIQASIQAKALGADAIMLIT-PYYNKTNQRGLVKHFEAIADA-VKLPVVLY 134 (292)
T ss_dssp TSSCEEEECCC--SC------HHHHHHHHHHHHHHTCSEEEEEC-CCSSCCCHHHHHHHHHHHHHH-HCSCEEEE
T ss_pred CCCcEEEeCCc--cc------HHHHHHHHHHHHHcCCCEEEECC-CCCCCCCHHHHHHHHHHHHHh-CCCCEEEE
Confidence 56678887622 11 23678899999999999999987 56888775 456667665 67887643
No 394
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=68.28 E-value=4.1 Score=38.43 Aligned_cols=49 Identities=12% Similarity=0.292 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeEEEeeCCCCCccc
Q 018446 274 DLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIELIGINNRNLETFE 324 (355)
Q Consensus 274 ~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~iIGINNRdL~Tfe 324 (355)
.+.|+.|.++|+++||..+.|+||...++.+.++ ++++-|-.++..+++
T Consensus 72 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~--~d~~kIga~~~~n~~ 120 (280)
T 2qkf_A 72 EEGLKIFEKVKAEFGIPVITDVHEPHQCQPVAEV--CDVIQLPAFLARQTD 120 (280)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH--CSEEEECGGGTTBHH
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHhh--CCEEEECcccccCHH
Confidence 5578889999999999999999999999999875 789999999998887
No 395
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=68.01 E-value=13 Score=36.25 Aligned_cols=89 Identities=17% Similarity=0.152 Sum_probs=68.1
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLD 276 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~ 276 (355)
...+++..+..|..-| =|| +- +++.+..+|+. +++||..-+-+.+.+++.+....| +|.|.+=+.-+ +-.+
T Consensus 228 A~~~~~~l~~~~i~~i---EqP-~~--d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~ 300 (398)
T 4dye_A 228 SVRAGIALEELDLEYL---EDP-CV--GIEGMAQVKAK-VRIPLCTNMCVVRFEDFAPAMRLNAVDVIHGDVYKWGGIAA 300 (398)
T ss_dssp HHHHHHHHGGGCCSEE---ECC-SS--HHHHHHHHHHH-CCSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSHHH
T ss_pred HHHHHHHHhhcCCCEE---cCC-CC--CHHHHHHHHhh-CCCCEEeCCcCCCHHHHHHHHHhCCCCEEEeCccccCCHHH
Confidence 3456677777775544 344 33 89999999986 899999999999999999888776 77777644443 4567
Q ss_pred HHHHHHHHHHcCCcEEEE
Q 018446 277 IRYMTKICKLLGLTALVE 294 (355)
Q Consensus 277 L~~L~~~A~~LGLeaLVE 294 (355)
...+.++|+..|+.+.+-
T Consensus 301 ~~~ia~~A~~~gi~~~~h 318 (398)
T 4dye_A 301 TKALAAHCETFGLGMNLH 318 (398)
T ss_dssp HHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHcCCeEEEc
Confidence 788999999999997763
No 396
>3tlq_A Regulatory protein YDIV; anti-FLHD4C2 factor, repress motility, transcription; 1.91A {Escherichia coli}
Probab=67.83 E-value=4.2 Score=36.29 Aligned_cols=107 Identities=9% Similarity=-0.022 Sum_probs=67.0
Q ss_pred eEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccc-cCHHHHHH
Q 018446 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFI-VDAWQIYY 256 (355)
Q Consensus 178 aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFI-IdpyQI~e 256 (355)
.++.|+--..+.. .........+...++| .|++ | -||..+..|..+++. |+ |+| ||.-=|..
T Consensus 114 ~l~lEitE~~~~~----~~~~~~~~l~~l~~~~--~ial--D--DFGtG~ssl~~L~~l----~~---d~iKID~s~v~~ 176 (242)
T 3tlq_A 114 FIELLINENYPHL----NEGKDNRGLLSLSQVY--PLVL--G--NLGAGNSTMKAVFDG----LF---TRVMLDKSFIQQ 176 (242)
T ss_dssp TEEEEECTTSTTG----GGGGGSHHHHHHHHHS--CEEE--E--EETSSSSCSHHHHTT----CC---SEEEECHHHHHH
T ss_pred cEEEEEeCChhhc----ChHHHHHHHHHHhhCC--EEEE--E--CCCCCcccHHHHHhC----CC---eEEEEcHHHHhh
Confidence 3888995543321 1111223445556666 3542 3 377777777777652 43 555 66654443
Q ss_pred HHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEE-eCCHHHHHHHhccCCCeE
Q 018446 257 ARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVE-VHDEREMDRVLGIEGIEL 312 (355)
Q Consensus 257 Ar~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVE-VH~~eELerAl~l~ga~i 312 (355)
......+ ..-++.++++|+++|+.++.| |.|.++++.+.++ |++.
T Consensus 177 ~~~~~~~----------~~iv~~ii~~a~~l~~~vvAEGVEt~~q~~~l~~l-G~~~ 222 (242)
T 3tlq_A 177 QITHRSF----------EPFIRAIQAQISPCCNCIIAGGIDTAEILAQITPF-DFHA 222 (242)
T ss_dssp HHHSGGG----------HHHHHHHHHHHTTTCSEEEECCCCSHHHHHHHGGG-CCSE
T ss_pred hccChhH----------HHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHc-CCCE
Confidence 3222211 223577899999999999999 9999999999987 8875
No 397
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=67.64 E-value=7 Score=37.05 Aligned_cols=62 Identities=23% Similarity=0.232 Sum_probs=44.5
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCH----HHHHHHHhcCCCCCeeccc
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSF----ENLEAVRSAGVKCPLLCKE 246 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~----edL~~VR~a~v~lPVLrKD 246 (355)
++..||+=+- +.| ..+..++++..++.||+++.|++ |-||.-+. +++++|.++ +++||+-=+
T Consensus 92 grvpViaGvg--~~~------t~~ai~la~~A~~~Gadavlv~~-P~y~~~s~~~l~~~f~~va~a-~~lPiilYn 157 (315)
T 3na8_A 92 HRVPTIVSVS--DLT------TAKTVRRAQFAESLGAEAVMVLP-ISYWKLNEAEVFQHYRAVGEA-IGVPVMLYN 157 (315)
T ss_dssp TSSCBEEECC--CSS------HHHHHHHHHHHHHTTCSEEEECC-CCSSCCCHHHHHHHHHHHHHH-CSSCEEEEE
T ss_pred CCCcEEEecC--CCC------HHHHHHHHHHHHhcCCCEEEECC-CCCCCCCHHHHHHHHHHHHHh-CCCcEEEEe
Confidence 4567888762 111 23678999999999999999987 66777664 455677775 788987544
No 398
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=67.63 E-value=8.2 Score=37.18 Aligned_cols=78 Identities=13% Similarity=0.069 Sum_probs=60.2
Q ss_pred CHHHHHHHHHHcCceEEEEeccC------CCCCC-CHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHH
Q 018446 198 DPVEIARSYEKGGAACLSILTDE------KYFKG-SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIA 269 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~------~fF~G-S~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIa 269 (355)
+..++|+..++. ++.|.|-.-. ..+.| .++....+|++ +++||+.---|-++.+..++...| ||+|.+==
T Consensus 231 ~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~-~~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR 308 (343)
T 3kru_A 231 MMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKR-CNIKTSAVGLITTQELAEEILSNERADLVALGR 308 (343)
T ss_dssp HHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH-HTCEEEEESSCCCHHHHHHHHHTTSCSEEEESH
T ss_pred HHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHh-cCcccceeeeeeHHHHHHHHHhchhhHHHHHHH
Confidence 456789999999 9999995211 12333 46778889986 899999999999999999999998 99998766
Q ss_pred hcCCHHHH
Q 018446 270 AVLPDLDI 277 (355)
Q Consensus 270 aiL~~~~L 277 (355)
.+|.+-+|
T Consensus 309 ~~lanPdl 316 (343)
T 3kru_A 309 ELLRNPYW 316 (343)
T ss_dssp HHHHCTTH
T ss_pred HHhcCCeE
Confidence 66654343
No 399
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=67.61 E-value=9.3 Score=33.64 Aligned_cols=64 Identities=13% Similarity=0.063 Sum_probs=41.0
Q ss_pred HHHHHHHHcCCcchHHHH----hc--C----C-H-------HHHHHHHHHHHHcCCcEEEEeCC---------HHHHHHH
Q 018446 252 WQIYYARTKGADAVLLIA----AV--L----P-D-------LDIRYMTKICKLLGLTALVEVHD---------EREMDRV 304 (355)
Q Consensus 252 yQI~eAr~~GADAVLLIa----ai--L----~-~-------~~L~~L~~~A~~LGLeaLVEVH~---------~eELerA 304 (355)
..|..|..+||..|.... .. + + + +.|.++.++|.+.|+...+|-|+ .+++.+.
T Consensus 92 ~~i~~a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~~l 171 (290)
T 2qul_A 92 RLLDDCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYALEVVNRFEQWLCNDAKEAIAF 171 (290)
T ss_dssp HHHHHHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEEECCCTTTCSSCCSHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCccccccccCCHHHHHHH
Confidence 346668888998876321 11 1 1 1 35677788999999999999874 6777776
Q ss_pred hccCCCeEEEe
Q 018446 305 LGIEGIELIGI 315 (355)
Q Consensus 305 l~l~ga~iIGI 315 (355)
++.-+.+-+|+
T Consensus 172 ~~~~~~~~~g~ 182 (290)
T 2qul_A 172 ADAVDSPACKV 182 (290)
T ss_dssp HHHHCCTTEEE
T ss_pred HHHcCCCCEEE
Confidence 64323333454
No 400
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=67.19 E-value=3 Score=38.67 Aligned_cols=112 Identities=15% Similarity=0.217 Sum_probs=70.7
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCe-eccccccCHHHHHHHHHcCCcchHHHHh------
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL-LCKEFIVDAWQIYYARTKGADAVLLIAA------ 270 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPV-LrKDFIIdpyQI~eAr~~GADAVLLIaa------ 270 (355)
||..+.+.|.++||+.|+|..|.. .--.+.+..+|+++...=| |.-. .|....+...-+.|.||++.-
T Consensus 97 ~p~~~i~~~~~aGAd~itvH~Ea~--~~~~~~i~~ir~~G~k~Gvalnp~---Tp~e~l~~~l~~vD~VlvMsV~PGfgG 171 (246)
T 3inp_A 97 PVDALIESFAKAGATSIVFHPEAS--EHIDRSLQLIKSFGIQAGLALNPA---TGIDCLKYVESNIDRVLIMSVNPGFGG 171 (246)
T ss_dssp SCHHHHHHHHHHTCSEEEECGGGC--SCHHHHHHHHHTTTSEEEEEECTT---CCSGGGTTTGGGCSEEEEECSCTTC--
T ss_pred CHHHHHHHHHHcCCCEEEEccccc--hhHHHHHHHHHHcCCeEEEEecCC---CCHHHHHHHHhcCCEEEEeeecCCCCC
Confidence 567889999999999999998864 2235788888876432111 1111 112222233335787765421
Q ss_pred --cCC--HHHHHHHHHHHHHcCCcEEEEeC---CHHHHHHHhccCCCeEEEe
Q 018446 271 --VLP--DLDIRYMTKICKLLGLTALVEVH---DEREMDRVLGIEGIELIGI 315 (355)
Q Consensus 271 --iL~--~~~L~~L~~~A~~LGLeaLVEVH---~~eELerAl~l~ga~iIGI 315 (355)
..+ -+.++++-++..+.|.+..+||- +.+-+..+.++ ||+++-+
T Consensus 172 Q~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~~~ti~~~~~a-GAD~~V~ 222 (246)
T 3inp_A 172 QKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVC-GVNAFVA 222 (246)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHTT-TCCEEEE
T ss_pred cccchHHHHHHHHHHHHHHhcCCCeeEEEECCcCHHHHHHHHHc-CCCEEEE
Confidence 111 13566777777778999999984 46667777886 8987754
No 401
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=67.02 E-value=22 Score=34.30 Aligned_cols=115 Identities=11% Similarity=0.131 Sum_probs=65.2
Q ss_pred HHHHHHHHHcCceEEEEec----------------cCCCCCCCHHH--------HHHHHhcCCC-CCeecc----cccc-
Q 018446 200 VEIARSYEKGGAACLSILT----------------DEKYFKGSFEN--------LEAVRSAGVK-CPLLCK----EFIV- 249 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLT----------------D~~fF~GS~ed--------L~~VR~a~v~-lPVLrK----DFII- 249 (355)
++.|+...++|+++|=+.- -..-|+||+++ +.+||++ +. -||..| |+.-
T Consensus 164 ~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~-vg~~~v~vrls~~~~~~~ 242 (364)
T 1vyr_A 164 RQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNE-WSADRIGIRVSPIGTFQN 242 (364)
T ss_dssp HHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHH-SCGGGEEEEECCSSCBTT
T ss_pred HHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHh-cCCCcEEEEEcccccccc
Confidence 4555566788999999843 12347899643 6778876 42 277662 3211
Q ss_pred ------CH---HH-HHHHHHcCCcchHHHHhcCC---HHHHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhccCCCeEEE
Q 018446 250 ------DA---WQ-IYYARTKGADAVLLIAAVLP---DLDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIG 314 (355)
Q Consensus 250 ------dp---yQ-I~eAr~~GADAVLLIaaiL~---~~~L~~L~~~A~~LGLeaLV--EVH~~eELerAl~l~ga~iIG 314 (355)
+. .+ +.....+|+|.|-+...... ...+..+..+.+..++-.+. -+ |.+++++++...++++|+
T Consensus 243 ~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~~iPvi~~Ggi-t~~~a~~~l~~g~aD~V~ 321 (364)
T 1vyr_A 243 VDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFHGVIIGAGAY-TAEKAEDLIGKGLIDAVA 321 (364)
T ss_dssp BCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEEE
T ss_pred ccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHCCCCEEEECCc-CHHHHHHHHHCCCccEEE
Confidence 11 11 22344678998877653210 11222333444555653332 13 788888888753388888
Q ss_pred ee
Q 018446 315 IN 316 (355)
Q Consensus 315 IN 316 (355)
+-
T Consensus 322 ~g 323 (364)
T 1vyr_A 322 FG 323 (364)
T ss_dssp ES
T ss_pred EC
Confidence 74
No 402
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=67.00 E-value=21 Score=34.38 Aligned_cols=113 Identities=15% Similarity=0.281 Sum_probs=62.4
Q ss_pred HHHHHHcCceEEEEe--------------c--cCCCCCCCHH--------HHHHHHhcCC--CCCeecc----ccccC--
Q 018446 203 ARSYEKGGAACLSIL--------------T--DEKYFKGSFE--------NLEAVRSAGV--KCPLLCK----EFIVD-- 250 (355)
Q Consensus 203 A~~Ye~~GAaaISVL--------------T--D~~fF~GS~e--------dL~~VR~a~v--~lPVLrK----DFIId-- 250 (355)
|+.-.++|+++|=+. | -..-|+||++ -+++||++ + +.||..| ||.=+
T Consensus 149 A~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~a-vg~d~pv~vRls~~~~~~~g~ 227 (343)
T 3kru_A 149 AKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKN-WPENKPIFVRVSADDYMEGGI 227 (343)
T ss_dssp HHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHT-SCTTSCEEEEEECCCSSTTSC
T ss_pred HhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhc-CCccCCeEEEeechhhhccCc
Confidence 344456799999887 1 1235899964 56677875 5 6788765 55321
Q ss_pred ----HHHHHHHHHcCCcchHHHHhcC--------CHHHHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhccCCCeEEEee
Q 018446 251 ----AWQIYYARTKGADAVLLIAAVL--------PDLDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIEGIELIGIN 316 (355)
Q Consensus 251 ----pyQI~eAr~~GADAVLLIaaiL--------~~~~L~~L~~~A~~LGLeaLV--EVH~~eELerAl~l~ga~iIGIN 316 (355)
..++.+....-+|.|-+...-. +...+.....+.+..++-.+. -++|.+++++++...++++|++-
T Consensus 228 ~~~~~~~~a~~l~~~vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iG 307 (343)
T 3kru_A 228 NIDMMVEYINMIKDKVDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNERADLVALG 307 (343)
T ss_dssp CHHHHHHHHHHHTTTCSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTTSCSEEEES
T ss_pred cHHHHHHHHHHhhccccEEeccCCceEeeeecccCceeehHHHHHHHhcCcccceeeeeeHHHHHHHHHhchhhHHHHHH
Confidence 1223222221166655532111 111233333344445654333 24678888888875338888874
No 403
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=66.96 E-value=35 Score=32.88 Aligned_cols=69 Identities=20% Similarity=0.184 Sum_probs=57.6
Q ss_pred CHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHHHHHHHHHHHHcCCcEEEEe
Q 018446 226 SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLDIRYMTKICKLLGLTALVEV 295 (355)
Q Consensus 226 S~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~L~~L~~~A~~LGLeaLVEV 295 (355)
+++.+..+|+. +++||..-+-+.+.+++.+....| +|.|.+=..-+ +-.+...+.++|+..|+.+.+--
T Consensus 231 ~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~ 301 (386)
T 3fv9_G 231 SWAETKSLRAR-CALPLLLDELIQTETDLIAAIRDDLCDGVGLKVSKQGGITPMLRQRAIAAAAGMVMSVQD 301 (386)
T ss_dssp SHHHHHHHHTT-CCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHhCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEEeCC
Confidence 89999999985 899999999999999999988876 78777734333 45677889999999999988764
No 404
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=66.76 E-value=6 Score=38.88 Aligned_cols=77 Identities=16% Similarity=0.137 Sum_probs=56.3
Q ss_pred HHHHHHHHHHcC------ceEEEEeccC-------C--CCC-C--CHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHc
Q 018446 199 PVEIARSYEKGG------AACLSILTDE-------K--YFK-G--SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTK 260 (355)
Q Consensus 199 p~~iA~~Ye~~G------AaaISVLTD~-------~--fF~-G--S~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~ 260 (355)
..++|+..++.| ++.|.|-.-. . ++. | ..+....+|++ +++||+.--=| ++-+..++...
T Consensus 262 ~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~-~~iPvi~~G~i-~~~~a~~~l~~ 339 (402)
T 2hsa_B 262 GLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNA-YQGTFICSGGY-TRELGIEAVAQ 339 (402)
T ss_dssp HHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHH-CSSCEEEESSC-CHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHH-CCCCEEEeCCC-CHHHHHHHHHC
Confidence 568999999999 9999995321 1 111 1 24566788886 89999887666 99999999999
Q ss_pred C-CcchHHHHhcCCHHHH
Q 018446 261 G-ADAVLLIAAVLPDLDI 277 (355)
Q Consensus 261 G-ADAVLLIaaiL~~~~L 277 (355)
| ||+|.+==++|.+-++
T Consensus 340 g~aD~V~igR~~l~dP~l 357 (402)
T 2hsa_B 340 GDADLVSYGRLFISNPDL 357 (402)
T ss_dssp TSCSEEEESHHHHHCTTH
T ss_pred CCCceeeecHHHHhCchH
Confidence 8 9999875555554333
No 405
>3co8_A Alanine racemase; protein structure initiative II, PSI-II, PLP, TIM barrel, structural genomics, NEW YORK SGX center for structural genomics; HET: PLP; 1.70A {Oenococcus oeni}
Probab=66.67 E-value=34 Score=32.52 Aligned_cols=103 Identities=16% Similarity=0.152 Sum_probs=70.6
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIR 278 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~ 278 (355)
..++++.+.+.|+..+.|. +.+.+..+|+++.+.|+|.== .+.+-++.++..++ ++..+=+.++++
T Consensus 48 ~~~i~~~l~~~G~~~~~va--------s~~Ea~~l~~aG~~~~il~~g-~~~~~~~~~~~~~~-----i~~~vds~~~l~ 113 (380)
T 3co8_A 48 LLQVSKIARECGVDGLAVS--------VLDEGIAIRQAGIDDFILILG-PIDVKYAPIASKYH-----FLTTVSSLDWLK 113 (380)
T ss_dssp HHHHHHHHGGGTCCEEEES--------SHHHHHHHHHTTCCCCEEECS-CCCGGGHHHHHHTT-----CEEEECCHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEe--------eHHHHHHHHhcCCCCCEEEEC-CCCHHHHHHHHHCC-----CEEEECCHHHHH
Confidence 4679999988999886664 577788888877776777432 25566777777654 234666777888
Q ss_pred HHHHHHHHcC-CcEEEEeCC---------HHHHHHHh----c-cCCCeEEEee
Q 018446 279 YMTKICKLLG-LTALVEVHD---------EREMDRVL----G-IEGIELIGIN 316 (355)
Q Consensus 279 ~L~~~A~~LG-LeaLVEVH~---------~eELerAl----~-l~ga~iIGIN 316 (355)
.|.+.|. +| +.++++|.+ .+|+..++ . +++.++.||-
T Consensus 114 ~l~~~a~-~~~~~V~l~vdtG~~R~G~~~~ee~~~~~~~i~~~~~~l~l~Gl~ 165 (380)
T 3co8_A 114 SADKILG-KEKLSVNLAVDTGMNRIGVRSKKDLKDEIEFLQEHSDHFSYDGIF 165 (380)
T ss_dssp HHHHHCT-TCCEEEEEEBCSSSCSSSBCSHHHHHHHHHHHHHCTTTEEEEEEE
T ss_pred HHHHhcc-cCCceEEEEEcCCCCCCCCCCHHHHHHHHHHHHhhCCCceEEEEE
Confidence 8888777 66 557777763 56654432 3 4577888883
No 406
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=66.64 E-value=6 Score=37.57 Aligned_cols=62 Identities=18% Similarity=0.183 Sum_probs=42.6
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCC--CC----HHHHHHHHhcCCCCCeeccc
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFK--GS----FENLEAVRSAGVKCPLLCKE 246 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~--GS----~edL~~VR~a~v~lPVLrKD 246 (355)
++..||+=+- +.| ..+..++++..++.||+++.|++ |.||. -+ +++++.|.++ +++||+-=+
T Consensus 79 grvpviaGvg--~~~------t~~ai~la~~a~~~Gadavlv~~-P~y~~kp~~~~~l~~~f~~ia~a-~~lPiilYn 146 (318)
T 3qfe_A 79 PDFPIMAGVG--AHS------TRQVLEHINDASVAGANYVLVLP-PAYFGKATTPPVIKSFFDDVSCQ-SPLPVVIYN 146 (318)
T ss_dssp TTSCEEEECC--CSS------HHHHHHHHHHHHHHTCSEEEECC-CCC---CCCHHHHHHHHHHHHHH-CSSCEEEEE
T ss_pred CCCcEEEeCC--CCC------HHHHHHHHHHHHHcCCCEEEEeC-CcccCCCCCHHHHHHHHHHHHhh-CCCCEEEEe
Confidence 5667898762 121 23678999999999999999987 55774 34 5677778775 778876433
No 407
>1twi_A Diaminopimelate decarboxylase; antibiotic resistance, lysine biosynthesis, structural genomics, NYSGXRC, PSI; HET: LYS PLP; 2.00A {Methanocaldococcus jannaschii} SCOP: b.49.2.3 c.1.6.1 PDB: 1tuf_A*
Probab=66.63 E-value=34 Score=32.90 Aligned_cols=83 Identities=14% Similarity=0.079 Sum_probs=63.0
Q ss_pred HHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCC-CCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHH
Q 018446 201 EIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVK-CPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRY 279 (355)
Q Consensus 201 ~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~-lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~ 279 (355)
.+++.+.+.|+ .+-|- |...+..+|+++++ .+|+.-=....+..+.+|..+|. .+..+=+.++++.
T Consensus 75 ~v~~~l~~~G~-g~~va--------s~~E~~~~~~~G~~~~~I~~~g~~k~~~~i~~a~~~~i----~~~~vds~~el~~ 141 (434)
T 1twi_A 75 AITRLLAKLGC-GADVV--------SGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGIEANI----RAFNVDSISELIL 141 (434)
T ss_dssp HHHHHHHHTTC-EEEEC--------SHHHHHHHHHTTCCGGGEEECCSSCCHHHHHHHHHTTC----SEEEECSHHHHHH
T ss_pred HHHHHHHHcCC-cEEEe--------CHHHHHHHHHCCCCCCcEEEECCCCCHHHHHHHHHCCC----CEEEECCHHHHHH
Confidence 68898888897 65554 45788888887665 57776555567888999888762 2456667788999
Q ss_pred HHHHHHHcC--CcEEEEeC
Q 018446 280 MTKICKLLG--LTALVEVH 296 (355)
Q Consensus 280 L~~~A~~LG--LeaLVEVH 296 (355)
|.+.|.+.| ..+++.|.
T Consensus 142 l~~~a~~~~~~~~v~lrvn 160 (434)
T 1twi_A 142 INETAKELGETANVAFRIN 160 (434)
T ss_dssp HHHHHHHHTCCEEEEEEEE
T ss_pred HHHHHHhcCCCCeEEEEEC
Confidence 999998877 56899996
No 408
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=66.49 E-value=20 Score=31.91 Aligned_cols=85 Identities=24% Similarity=0.233 Sum_probs=62.0
Q ss_pred CHHHHHHHHhcCCCCCe--eccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEE-eCCHHHHH
Q 018446 226 SFENLEAVRSAGVKCPL--LCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVE-VHDEREMD 302 (355)
Q Consensus 226 S~edL~~VR~a~v~lPV--LrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVE-VH~~eELe 302 (355)
+.+.|..+|+...++|+ |....-.+. ...++..|+++|-+-...+++ .+++.+++.|+.+.+= |.+.++++
T Consensus 149 ~~~~l~~~~~~~p~~~~~~l~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~----~~v~~~~~~G~~v~~wTvn~~~~~~ 222 (247)
T 2otd_A 149 EIDALEAAQQAAPELPRGLLLDEWRDDW--RELTARLGCVSIHLNHKLLDK----ARVMQLKDAGLRILVYTVNKPQHAA 222 (247)
T ss_dssp CHHHHHHHHHHCTTSCEEEEESSCCTTH--HHHHHHHTCSEEEEEGGGCCH----HHHHHHHHTTCEEEEECCCCHHHHH
T ss_pred CHHHHHHHHHHCCCCCEEEEecCCcccH--HHHHHHcCCeEEecChHhCCH----HHHHHHHHCCCEEEEEccCCHHHHH
Confidence 67888889875456663 333222222 234677899998877777764 6789999999998875 68999999
Q ss_pred HHhccCCCeEEEeeC
Q 018446 303 RVLGIEGIELIGINN 317 (355)
Q Consensus 303 rAl~l~ga~iIGINN 317 (355)
+.+++ |++.|--|.
T Consensus 223 ~l~~~-GvdgI~TD~ 236 (247)
T 2otd_A 223 ELLRW-GVDCICTDA 236 (247)
T ss_dssp HHHHH-TCSEEEESC
T ss_pred HHHHc-CCCEEEeCC
Confidence 99997 888876664
No 409
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=66.25 E-value=6.3 Score=36.85 Aligned_cols=72 Identities=18% Similarity=0.113 Sum_probs=49.9
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCC-CCH----HHHHHHHhcCC---CCCeeccc
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFK-GSF----ENLEAVRSAGV---KCPLLCKE 246 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~-GS~----edL~~VR~a~v---~lPVLrKD 246 (355)
++..||+=+--.| ..+..++++..++.||+++.|++ |-||. .+. ++++.|.++ + ++||+-=+
T Consensus 71 gr~pviaGvg~~~--------t~~ai~la~~A~~~Gadavlv~~-P~y~~~~s~~~l~~~f~~va~a-~p~~~lPiilYn 140 (294)
T 3b4u_A 71 APSRIVTGVLVDS--------IEDAADQSAEALNAGARNILLAP-PSYFKNVSDDGLFAWFSAVFSK-IGKDARDILVYN 140 (294)
T ss_dssp CGGGEEEEECCSS--------HHHHHHHHHHHHHTTCSEEEECC-CCSSCSCCHHHHHHHHHHHHHH-HCTTCCCEEEEE
T ss_pred CCCcEEEeCCCcc--------HHHHHHHHHHHHhcCCCEEEEcC-CcCCCCCCHHHHHHHHHHHHHh-cCCCCCcEEEEE
Confidence 4567888773221 13577899999999999999997 66777 564 555677775 7 89987655
Q ss_pred c------ccCHHHHHH
Q 018446 247 F------IVDAWQIYY 256 (355)
Q Consensus 247 F------IIdpyQI~e 256 (355)
+ -+++-.+.+
T Consensus 141 ~P~~tg~~l~~~~~~~ 156 (294)
T 3b4u_A 141 IPSVTMVTLSVELVGR 156 (294)
T ss_dssp CHHHHSCCCCHHHHHH
T ss_pred CcchhCcCCCHHHHHH
Confidence 3 355555543
No 410
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=66.23 E-value=5.2 Score=37.31 Aligned_cols=60 Identities=23% Similarity=0.265 Sum_probs=42.4
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHH----HHHhcCCCCCeec
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLE----AVRSAGVKCPLLC 244 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~----~VR~a~v~lPVLr 244 (355)
++..||+=+--. | ..+..++++..++.||+++.|++ |-||..+.+.|. .|.++ +++||+-
T Consensus 69 gr~pvi~Gvg~~--~------t~~ai~la~~a~~~Gadavlv~~-P~y~~~s~~~l~~~f~~ia~a-~~lPiil 132 (291)
T 3a5f_A 69 KRIPVIAGTGSN--N------TAASIAMSKWAESIGVDGLLVIT-PYYNKTTQKGLVKHFKAVSDA-VSTPIII 132 (291)
T ss_dssp TSSCEEEECCCS--S------HHHHHHHHHHHHHTTCSEEEEEC-CCSSCCCHHHHHHHC-CTGGG-CCSCEEE
T ss_pred CCCcEEEeCCcc--c------HHHHHHHHHHHHhcCCCEEEEcC-CCCCCCCHHHHHHHHHHHHHh-cCCCEEE
Confidence 456788877221 1 23677899999999999999997 678888866654 44444 5777654
No 411
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=66.01 E-value=4 Score=39.91 Aligned_cols=88 Identities=15% Similarity=0.173 Sum_probs=56.3
Q ss_pred CCHHHHHHHHhcCCCCCee--ccccccCHHHHHHHHHcCCcchHHHHhcCC---H-HHHHHHHHHHHHcCCcEEEEeCCH
Q 018446 225 GSFENLEAVRSAGVKCPLL--CKEFIVDAWQIYYARTKGADAVLLIAAVLP---D-LDIRYMTKICKLLGLTALVEVHDE 298 (355)
Q Consensus 225 GS~edL~~VR~a~v~lPVL--rKDFIIdpyQI~eAr~~GADAVLLIaaiL~---~-~~L~~L~~~A~~LGLeaLVEVH~~ 298 (355)
++++.|..+++. +++||+ .-==|-+|-++.+...+|||+|+..-+++. + ...+.|.+... ...|.
T Consensus 227 ~~lell~~i~~~-~~IPVV~VAeGGI~Tpeda~~~l~~GaDgV~VGsaI~~a~dP~~aar~l~~ai~--------~~~~~ 297 (330)
T 2yzr_A 227 GLYEVLLEVKKL-GRLPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFKSENPLERARAIVEATY--------NYDKP 297 (330)
T ss_dssp HHHHHHHHHHHH-TSCSSEEEECSCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHH--------TTTCH
T ss_pred chHHHHHHHHHh-CCCCeEEEEECCCCCHHHHHHHHHcCcCEEeeHHHHhcCCCHHHHHHHHHHHHH--------hcCCH
Confidence 445889999885 789985 444444799999999999999999999972 2 34555554443 24566
Q ss_pred HHHHHHhccCCCeEEEeeCCCCC
Q 018446 299 REMDRVLGIEGIELIGINNRNLE 321 (355)
Q Consensus 299 eELerAl~l~ga~iIGINNRdL~ 321 (355)
+-+..+-.--|-.+.|||...|.
T Consensus 298 ~~~~~~s~~~~~~m~g~~~~~~~ 320 (330)
T 2yzr_A 298 DIVAEVSKNLGEAMKGIDITQIS 320 (330)
T ss_dssp HHHHHHHTTCCCCCCC-------
T ss_pred HHHHHHHhcccccCcCccccccC
Confidence 66655433226679999877763
No 412
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=65.87 E-value=7.3 Score=37.60 Aligned_cols=62 Identities=18% Similarity=0.130 Sum_probs=44.4
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCC-CC----HHHHHHHHh-cCCCCCeeccc
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFK-GS----FENLEAVRS-AGVKCPLLCKE 246 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~-GS----~edL~~VR~-a~v~lPVLrKD 246 (355)
++..||+=+- +.| ..+..++++..++.||+++.|++ |-||. .+ +++++.|.+ + +++||+-=+
T Consensus 91 grvpViaGvg--~~s------t~eai~la~~A~~~Gadavlv~~-P~y~~~~s~~~l~~~f~~IA~aa-~~lPiilYn 158 (344)
T 2hmc_A 91 AGIPVIVGTG--AVN------TASAVAHAVHAQKVGAKGLMVIP-RVLSRGSVIAAQKAHFKAILSAA-PEIPAVIYN 158 (344)
T ss_dssp TTCCEEEECC--CSS------HHHHHHHHHHHHHHTCSEEEECC-CCSSSTTCHHHHHHHHHHHHHHS-TTSCEEEEE
T ss_pred CCCcEEEecC--CCC------HHHHHHHHHHHHhcCCCEEEECC-CccCCCCCHHHHHHHHHHHHhhC-CCCcEEEEe
Confidence 4567888772 121 23677899999999999999997 66777 46 455667777 5 789976554
No 413
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=65.61 E-value=4.7 Score=41.31 Aligned_cols=79 Identities=23% Similarity=0.296 Sum_probs=60.8
Q ss_pred CHHHHHHHHHHcCceEEEEec---cCC------CCC-CC-HHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-Ccch
Q 018446 198 DPVEIARSYEKGGAACLSILT---DEK------YFK-GS-FENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAV 265 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLT---D~~------fF~-GS-~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAV 265 (355)
+..++|+..++.|++.|.|-. ++. +.. |. ++.+..+|++ +++||+.--=|.++.+..++...| ||+|
T Consensus 229 ~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~iPvi~~Ggi~~~~~a~~~l~~g~aD~V 307 (671)
T 1ps9_A 229 ETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGH-VSLPLVTTNRINDPQVADDILSRGDADMV 307 (671)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTS-CSSCEEECSSCCSHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHh-cCceEEEeCCCCCHHHHHHHHHcCCCCEE
Confidence 456789999999999998842 221 111 22 5778889985 899999988888999999999999 9999
Q ss_pred HHHHhcCCHHHH
Q 018446 266 LLIAAVLPDLDI 277 (355)
Q Consensus 266 LLIaaiL~~~~L 277 (355)
-+-=++|.+.++
T Consensus 308 ~~gR~~l~~P~l 319 (671)
T 1ps9_A 308 SMARPFLADAEL 319 (671)
T ss_dssp EESTHHHHCTTH
T ss_pred EeCHHHHhCcHH
Confidence 887777755444
No 414
>1vfs_A Alanine racemase; TIM-barrel, greek-KEY motief, isomerase; HET: KCX DCS; 1.90A {Streptomyces lavendulae} SCOP: b.49.2.2 c.1.6.1 PDB: 1vfh_A* 1vft_A*
Probab=65.45 E-value=37 Score=32.27 Aligned_cols=105 Identities=15% Similarity=0.160 Sum_probs=71.4
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHH
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDI 277 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L 277 (355)
...++++.+.+.|+..+.| -+.+.+..+|+++.+.|+|.=-. +.+-++.++..+|. +..+=+.+++
T Consensus 45 g~~~i~~~l~~~G~~~f~v--------as~~Ea~~~~~~G~~~~il~~~~-~~~~~~~~~~~~~i-----~~~vds~~~l 110 (386)
T 1vfs_A 45 GAVPCARAAQEAGAAWLGT--------ATPEEALELRAAGIQGRIMCWLW-TPGGPWREAIETDI-----DVSVSGMWAL 110 (386)
T ss_dssp CHHHHHHHHHHHTCCEEEE--------SSHHHHHHHHHTTCCSEEEECCC-CTTCCHHHHHHTTC-----EEEECSHHHH
T ss_pred CHHHHHHHHHHCCCCEEEE--------eeHHHHHHHHhcCCCCCEEEECC-CCHHHHHHHHHcCC-----EEEECCHHHH
Confidence 3467999888889888666 45778888888777767773211 23345666665432 3466677889
Q ss_pred HHHHHHHHHcC--CcEEEEeCC--------HHHH-------HHHhccCCCeEEEee
Q 018446 278 RYMTKICKLLG--LTALVEVHD--------EREM-------DRVLGIEGIELIGIN 316 (355)
Q Consensus 278 ~~L~~~A~~LG--LeaLVEVH~--------~eEL-------erAl~l~ga~iIGIN 316 (355)
+.|.+.|.++| +.++++|.+ .+|+ +++..+++.++.|+-
T Consensus 111 ~~l~~~a~~~~~~~~V~l~vdtG~~R~G~~~~e~~~~~~~~~~i~~~~~l~l~Gl~ 166 (386)
T 1vfs_A 111 DEVRAAARAAGRTARIQLKADTGLGRNGCQPADWAELVGAAVAAQAEGTVQVTGVW 166 (386)
T ss_dssp HHHHHHHHHHTSCEEEEEEBCSSCCSSSBCHHHHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred HHHHHHHHhcCCceEEEEEEcCCCCCCCCCHhHHHHHHHHHHHHHhCCCceEEEEE
Confidence 99988988877 568888876 3553 333444578899983
No 415
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=65.41 E-value=42 Score=32.51 Aligned_cols=93 Identities=15% Similarity=0.183 Sum_probs=69.5
Q ss_pred CCCCHH---HHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHH-
Q 018446 195 EDFDPV---EIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIA- 269 (355)
Q Consensus 195 ~~~Dp~---~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIa- 269 (355)
..+++. .+++.++..| + .+-|| + .+++.+..+|+. +++||..-+-+.+.+++.+....| +|.|.+=.
T Consensus 219 ~~w~~~~A~~~~~~L~~~~---i-~iEeP--~-~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~ik~~ 290 (391)
T 4e8g_A 219 RSLPSRDALRLSRECPEIP---F-VLEQP--C-NTLEEIAAIRGR-VQHGIYLDESGEDLSTVIRAAGQGLCDGFGMKLT 290 (391)
T ss_dssp TCCCHHHHHHHHHHCTTSC---E-EEESC--S-SSHHHHHHHGGG-CCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHH
T ss_pred CCCCHHHHHHHHHHHhhcC---e-EEecC--C-ccHHHHHHHHhh-CCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCcc
Confidence 344554 4555666554 4 45555 3 589999999986 899999999999999999988877 67776633
Q ss_pred hcCCHHHHHHHHHHHHHcCCcEEEEe
Q 018446 270 AVLPDLDIRYMTKICKLLGLTALVEV 295 (355)
Q Consensus 270 aiL~~~~L~~L~~~A~~LGLeaLVEV 295 (355)
.+=+-.+...+.++|+..|+.+.+-.
T Consensus 291 ~~GGit~~~~ia~~A~~~gi~~~~~~ 316 (391)
T 4e8g_A 291 RIGGLQQMAAFRDICEARALPHSCDD 316 (391)
T ss_dssp HHTSHHHHHHHHHHHHHTTCCEEEEC
T ss_pred ccCCHHHHHHHHHHHHHcCCeEEeCC
Confidence 33345677889999999999988763
No 416
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=65.03 E-value=14 Score=33.65 Aligned_cols=112 Identities=17% Similarity=0.134 Sum_probs=68.0
Q ss_pred HHHHHcCceEEEEeccCCCC-CCCH----HHHHHHHhcC--CCCCeeccccccCHHHHHH----HHHcCCcchHHHHhcC
Q 018446 204 RSYEKGGAACLSILTDEKYF-KGSF----ENLEAVRSAG--VKCPLLCKEFIVDAWQIYY----ARTKGADAVLLIAAVL 272 (355)
Q Consensus 204 ~~Ye~~GAaaISVLTD~~fF-~GS~----edL~~VR~a~--v~lPVLrKDFIIdpyQI~e----Ar~~GADAVLLIaaiL 272 (355)
+.-.+.||++|++...-.++ .|.+ +++..++++. ..+||+---=-+++-||.. |..+|||-|---...-
T Consensus 78 ~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTsTGf~ 157 (220)
T 1ub3_A 78 ALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGGADFLKTSTGFG 157 (220)
T ss_dssp HHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSSS
T ss_pred HHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeCCCCC
Confidence 44447899999998875544 3554 5777887752 1244322111134444443 4578999886653332
Q ss_pred ----CHHHHHHHHHHHH-HcCCcEEEEeCCHHHHHHHhccCCCeEEEee
Q 018446 273 ----PDLDIRYMTKICK-LLGLTALVEVHDEREMDRVLGIEGIELIGIN 316 (355)
Q Consensus 273 ----~~~~L~~L~~~A~-~LGLeaLVEVH~~eELerAl~l~ga~iIGIN 316 (355)
+.++.+.|.+... ..|+-+-=-++|.+++..-+.+ |+.-||..
T Consensus 158 ~~gat~~dv~~m~~~vg~~v~VkaaGGirt~~~al~~i~a-Ga~RiG~S 205 (220)
T 1ub3_A 158 PRGASLEDVALLVRVAQGRAQVKAAGGIRDRETALRMLKA-GASRLGTS 205 (220)
T ss_dssp SCCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHT-TCSEEEET
T ss_pred CCCCCHHHHHHHHHhhCCCCeEEEECCCCCHHHHHHHHHC-CCcccchh
Confidence 4456666665541 2233333347899999998886 99988874
No 417
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=64.62 E-value=35 Score=26.93 Aligned_cols=81 Identities=12% Similarity=0.192 Sum_probs=64.4
Q ss_pred HHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhc
Q 018446 227 FENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLG 306 (355)
Q Consensus 227 ~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~ 306 (355)
++.|..+++++ -++.-.-|+..+...|--.+++||.=-++.....+..+|...+. +++.+.|.+||-.|+.
T Consensus 8 ~~~L~la~kag--------k~v~G~~~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~v-p~~~~~s~~eLG~A~G 78 (101)
T 3v7q_A 8 FPLLGLANRAR--------KVVSGEDLVIKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKV-PYKKVESRAVLGRSIG 78 (101)
T ss_dssp HHHHHHHHHTT--------CEEESHHHHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTC-CEEEESCHHHHHHHTT
T ss_pred HHHhhhhhhhh--------hcccchhhhHHHHhcCceeEEEEeccccccchhhhcccccccCC-CeeeechHHHHHhhhC
Confidence 45566667652 24556668999999999888889998999888889999999997 5678899999999987
Q ss_pred cCCCeEEEee
Q 018446 307 IEGIELIGIN 316 (355)
Q Consensus 307 l~ga~iIGIN 316 (355)
......++|-
T Consensus 79 k~~~~~~ai~ 88 (101)
T 3v7q_A 79 KEARVVVAVT 88 (101)
T ss_dssp SSCCSEEEEC
T ss_pred ccceEEEEEe
Confidence 6445578883
No 418
>4hjf_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, EAL domain, signaling protein; HET: MSE C2E; 1.75A {Caulobacter crescentus}
Probab=64.61 E-value=7 Score=37.08 Aligned_cols=109 Identities=21% Similarity=0.307 Sum_probs=65.1
Q ss_pred eEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccc-cCHHHHHH
Q 018446 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFI-VDAWQIYY 256 (355)
Q Consensus 178 aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFI-IdpyQI~e 256 (355)
.++.|+--.... ...-......+.+.+.|. .|--| -||..+..|..+++ +|+ |+| ||.--|..
T Consensus 197 ~l~lEitE~~~~----~~~~~~~~~l~~Lr~~G~---~ialD--DFGtG~ssl~~L~~----lp~---d~iKID~sfv~~ 260 (340)
T 4hjf_A 197 ALKLEVTESDIM----RDPERAAVILKTLRDAGA---GLALD--DFGTGFSSLSYLTR----LPF---DTLKIDRYFVRT 260 (340)
T ss_dssp SEEEEEEHHHHH----TSHHHHHHHHHHHHHHTC---EEEEE--CTTSSSCGGGTGGG----SCC---SEEEECHHHHHH
T ss_pred eEEEEeeccccc----cchHHHHHHHHHHHHcCC---Ccccc--CCCCCcchHHHHHh----CCC---ChhcccHHhhhc
Confidence 588888554332 111112344456666663 23333 47777777777754 242 444 44433321
Q ss_pred HHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEE-eCCHHHHHHHhccCCCeEE
Q 018446 257 ARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVE-VHDEREMDRVLGIEGIELI 313 (355)
Q Consensus 257 Ar~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVE-VH~~eELerAl~l~ga~iI 313 (355)
..-|.- ...-++.++.+|+++|++++.| |.|+++++.+.++ |++.+
T Consensus 261 ---~~~~~~-------~~~iv~~ii~la~~lg~~vvAEGVEt~~q~~~L~~l-G~d~~ 307 (340)
T 4hjf_A 261 ---MGNNAG-------SAKIVRSVVKLGQDLDLEVVAEGVENAEMAHALQSL-GCDYG 307 (340)
T ss_dssp ---TTTCHH-------HHHHHHHHHHHHHHHTCEEEEECCCSHHHHHHHHHT-TCCEE
T ss_pred ---ccCCHh-------HHHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHc-CCCEe
Confidence 111110 0113567899999999999999 9999999999887 88754
No 419
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=64.13 E-value=1.2 Score=40.22 Aligned_cols=73 Identities=14% Similarity=0.076 Sum_probs=51.7
Q ss_pred HHHHHcCceEEEEeccCCCCCC------CHHHHHHHHhcCC-----CCCeeccccccCHHHHHHHHHcCCcchHHHHhcC
Q 018446 204 RSYEKGGAACLSILTDEKYFKG------SFENLEAVRSAGV-----KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (355)
Q Consensus 204 ~~Ye~~GAaaISVLTD~~fF~G------S~edL~~VR~a~v-----~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL 272 (355)
+.|.. |++-+-|.|=..-|+| .++.++.+|+. . ++||. =|+.|.+-++.+...+|||.+...-++.
T Consensus 129 ~~~~~-~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~-~~~~~~~~~I~-v~GGI~~~~~~~~~~aGad~vvvGSai~ 205 (230)
T 1tqj_A 129 EYVLP-VCDLILIMSVNPGFGGQSFIPEVLPKIRALRQM-CDERGLDPWIE-VDGGLKPNNTWQVLEAGANAIVAGSAVF 205 (230)
T ss_dssp TTTGG-GCSEEEEESSCC----CCCCGGGHHHHHHHHHH-HHHHTCCCEEE-EESSCCTTTTHHHHHHTCCEEEESHHHH
T ss_pred HHHHh-cCCEEEEEEeccccCCccCcHHHHHHHHHHHHH-HHhcCCCCcEE-EECCcCHHHHHHHHHcCCCEEEECHHHH
Confidence 33433 6787766654444444 36888888875 4 67755 5999999999999999999999999998
Q ss_pred CHHHHHH
Q 018446 273 PDLDIRY 279 (355)
Q Consensus 273 ~~~~L~~ 279 (355)
..++.+.
T Consensus 206 ~a~d~~~ 212 (230)
T 1tqj_A 206 NAPNYAE 212 (230)
T ss_dssp TSSCHHH
T ss_pred CCCCHHH
Confidence 7544433
No 420
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=64.10 E-value=17 Score=36.05 Aligned_cols=91 Identities=12% Similarity=0.218 Sum_probs=69.3
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcC-CHHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL-PDLDI 277 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL-~~~~L 277 (355)
-+++...|+++||.-+=|-... .-+.+.|..+|+. +++||.. ||=.|+--..+|..+|+|.+=+.-.=+ +++..
T Consensus 48 tv~Qi~~l~~aG~diVRvavp~---~~~a~al~~I~~~-~~vPlva-DiHf~~~lal~a~e~G~dklRINPGNig~~~~~ 122 (366)
T 3noy_A 48 TLNQIKRLYEAGCEIVRVAVPH---KEDVEALEEIVKK-SPMPVIA-DIHFAPSYAFLSMEKGVHGIRINPGNIGKEEIV 122 (366)
T ss_dssp HHHHHHHHHHTTCCEEEEECCS---HHHHHHHHHHHHH-CSSCEEE-ECCSCHHHHHHHHHTTCSEEEECHHHHSCHHHH
T ss_pred HHHHHHHHHHcCCCEEEeCCCC---hHHHHHHHHHHhc-CCCCEEE-eCCCCHHHHHHHHHhCCCeEEECCcccCchhHH
Confidence 3466788999999886554321 1236788888885 8999875 888899999999999999965544434 46678
Q ss_pred HHHHHHHHHcCCcEEEE
Q 018446 278 RYMTKICKLLGLTALVE 294 (355)
Q Consensus 278 ~~L~~~A~~LGLeaLVE 294 (355)
+++++.|++.|.-.-|-
T Consensus 123 ~~vv~~ak~~~~piRIG 139 (366)
T 3noy_A 123 REIVEEAKRRGVAVRIG 139 (366)
T ss_dssp HHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHcCCCEEEe
Confidence 89999999999877775
No 421
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=63.99 E-value=25 Score=36.62 Aligned_cols=118 Identities=10% Similarity=0.149 Sum_probs=86.1
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHH--------HH
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLL--------IA 269 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLL--------Ia 269 (355)
|-.+-+.+..++|++.|-|=|---+-.+-++.++.+|+...++||+.=. +.+.-+...-..+|||+|.. +.
T Consensus 281 d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGN-VaT~e~a~~Li~aGAD~vkVGiGpGSiCtT 359 (556)
T 4af0_A 281 GDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGN-VVTREQAAQLIAAGADGLRIGMGSGSICIT 359 (556)
T ss_dssp HHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEE-ECSHHHHHHHHHHTCSEEEECSSCSTTBCC
T ss_pred cHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEecc-ccCHHHHHHHHHcCCCEEeecCCCCccccc
Confidence 4567889999999999999887766666678888888764577877654 46777777778899999853 11
Q ss_pred hc---CCHHHH---HHHHHHHHHcCCcEEEE--eCCHHHHHHHhccCCCeEEEeeC
Q 018446 270 AV---LPDLDI---RYMTKICKLLGLTALVE--VHDEREMDRVLGIEGIELIGINN 317 (355)
Q Consensus 270 ai---L~~~~L---~~L~~~A~~LGLeaLVE--VH~~eELerAl~l~ga~iIGINN 317 (355)
++ .+--++ .+..+.|+.+|.-.+-. +++.-++-+|+.+ ||+.+.+-+
T Consensus 360 r~v~GvG~PQ~tAi~~~a~~a~~~~vpvIADGGI~~sGDi~KAlaa-GAd~VMlGs 414 (556)
T 4af0_A 360 QEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAKALAL-GASAVMMGG 414 (556)
T ss_dssp TTTCCSCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHT-TCSEEEEST
T ss_pred ccccCCCCcHHHHHHHHHHHHHHcCCCEEecCCcCcchHHHHHhhc-CCCEEEEch
Confidence 11 111233 44556778888755553 9999999999997 999887643
No 422
>1bd0_A Alanine racemase; isomerase, pyridoxal phosphate, alanine phosphonate; HET: IN5; 1.60A {Geobacillus stearothermophilus} SCOP: b.49.2.2 c.1.6.1 PDB: 1sft_A* 2sfp_A* 1l6g_A* 1niu_A* 1l6f_A* 1xql_A* 1xqk_A* 1epv_A* 1ftx_A* 3uw6_A
Probab=63.96 E-value=23 Score=33.90 Aligned_cols=103 Identities=17% Similarity=0.211 Sum_probs=72.1
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIR 278 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~ 278 (355)
..++++.+.+.|+..+.| -+.+.+..+|+++++.|||.==. ..+-++..+..+| ++..+=+.++++
T Consensus 47 ~~~v~~~l~~~G~~~f~v--------as~~Ea~~lr~aG~~~~Il~~g~-~~~~~~~~~~~~~-----i~~~vds~~~l~ 112 (388)
T 1bd0_A 47 DVQVARTALEAGASRLAV--------AFLDEALALREKGIEAPILVLGA-SRPADAALAAQQR-----IALTVFRSDWLE 112 (388)
T ss_dssp HHHHHHHHHHHTCCEEEE--------SSHHHHHHHHHTTCCSCEEECSC-CCGGGHHHHHHTT-----EEEEECCHHHHH
T ss_pred HHHHHHHHHHCCCCEEEE--------eeHHHHHHHHhCCcCCCEEEECC-CCHHHHHHHHHcC-----CEEEECCHHHHH
Confidence 468999998889988666 45778888998777778875433 5566777777654 245666778888
Q ss_pred HHHHHHHHcC--CcEEEEeCC---------HHHHHHH----hccCCCeEEEee
Q 018446 279 YMTKICKLLG--LTALVEVHD---------EREMDRV----LGIEGIELIGIN 316 (355)
Q Consensus 279 ~L~~~A~~LG--LeaLVEVH~---------~eELerA----l~l~ga~iIGIN 316 (355)
.|.+.| ++| +.++++|.+ .+|+..+ ..+++.++.||-
T Consensus 113 ~l~~~a-~~~~~~~V~lkvdtGm~R~G~~~~~e~~~~~~~i~~~~~l~l~Gl~ 164 (388)
T 1bd0_A 113 EASALY-SGPFPIHFHLKMDTGMGRLGVKDEEETKRIVALIERHPHFVLEGLY 164 (388)
T ss_dssp HHHHHC-CCSSCEEEEEEBCSSSCSSSBCSHHHHHHHHHHHHHSTTEEEEEEE
T ss_pred HHHHHh-ccCCCeEEEEEEcCCCCcCCCCCHHHHHHHHHHHHhCCCceEEEEE
Confidence 888887 666 467888765 3555433 334577888883
No 423
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=63.95 E-value=18 Score=33.59 Aligned_cols=131 Identities=13% Similarity=0.165 Sum_probs=79.7
Q ss_pred CHHHHHHHHHHcCceEEEEec--cC---CCCCCCHHHHH-HHHhc-CCCCCeeccccccCHHHHHHHHHcCCcchHHHHh
Q 018446 198 DPVEIARSYEKGGAACLSILT--DE---KYFKGSFENLE-AVRSA-GVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAA 270 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLT--D~---~fF~GS~edL~-~VR~a-~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaa 270 (355)
+-.++++...+.|...|=+=+ -+ .++ ++.+.+. .+++. ++.+.+|. .....|..|..+|+|.|-+..+
T Consensus 28 ~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~-~d~~~~~~~~~~~~~~~~~~l~----~~~~~i~~a~~ag~~~v~i~~~ 102 (298)
T 2cw6_A 28 VKIKLIDMLSEAGLSVIETTSFVSPKWVPQM-GDHTEVLKGIQKFPGINYPVLT----PNLKGFEAAVAAGAKEVVIFGA 102 (298)
T ss_dssp HHHHHHHHHHHTTCSEECCEECCCTTTCGGG-TTHHHHHHHSCCCTTCBCCEEC----CSHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHHHHHHHHHcCcCEEEECCCcCccccccc-CCHHHHHHHHhhCCCCEEEEEc----CCHHhHHHHHHCCCCEEEEEec
Confidence 345678888888988776532 12 122 4444332 22221 12233433 3577899999999998766443
Q ss_pred cCCH---------------HHHHHHHHHHHHcCCcEEEEe-----------CCHHHHHHH----hccCCCeEEEeeCCCC
Q 018446 271 VLPD---------------LDIRYMTKICKLLGLTALVEV-----------HDEREMDRV----LGIEGIELIGINNRNL 320 (355)
Q Consensus 271 iL~~---------------~~L~~L~~~A~~LGLeaLVEV-----------H~~eELerA----l~l~ga~iIGINNRdL 320 (355)
.++ +.+.+.+++|++.|+++-+.+ ++.+++.+. .++ |++.|.+..-.
T Consensus 103 -~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-Ga~~i~l~DT~- 179 (298)
T 2cw6_A 103 -ASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSM-GCYEISLGDTI- 179 (298)
T ss_dssp -SCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHT-TCSEEEEEETT-
T ss_pred -CCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHc-CCCEEEecCCC-
Confidence 343 256778999999999876544 366665543 454 89999888321
Q ss_pred CccccChhhHHhhhcccc
Q 018446 321 ETFEVDNSNTKKLLEGER 338 (355)
Q Consensus 321 ~TfevDl~~t~~L~~~~~ 338 (355)
=-..+....++...++
T Consensus 180 --G~~~P~~~~~lv~~l~ 195 (298)
T 2cw6_A 180 --GVGTPGIMKDMLSAVM 195 (298)
T ss_dssp --SCCCHHHHHHHHHHHH
T ss_pred --CCcCHHHHHHHHHHHH
Confidence 1245666666665433
No 424
>2yxx_A Diaminopimelate decarboxylase; TM1517, TIM beta/alpha barrel fold, lyase, structural genomi NPPSFA; HET: PLP; 1.70A {Thermotoga maritima}
Probab=63.71 E-value=41 Score=31.77 Aligned_cols=81 Identities=14% Similarity=0.071 Sum_probs=61.5
Q ss_pred HHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCC-eeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHH
Q 018446 201 EIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCP-LLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRY 279 (355)
Q Consensus 201 ~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lP-VLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~ 279 (355)
.+++...+.|+ ++.| .|.+.+..+|+++++.| ||.--...++-++.+|..+|. .+..+=+.++|+.
T Consensus 52 ~v~~~l~~~G~-g~~v--------as~~E~~~~~~~G~~~~~Il~~~~~k~~~~l~~a~~~~v----~~~~vds~~el~~ 118 (386)
T 2yxx_A 52 VLLKILREEGF-GMDV--------VTKGELLAAKLAGVPSHTVVWNGNGKSRDQMEHFLREDV----RIVNVDSFEEMEI 118 (386)
T ss_dssp HHHHHHHHTTC-EEEE--------CSHHHHHHHHHTTCCGGGEEECCSCCCHHHHHHHHHTTC----CEEEECCHHHHHH
T ss_pred HHHHHHHHcCC-eEEE--------cCHHHHHHHHHcCCChhhEEEeCCCCCHHHHHHHHHCCC----CEEEeCCHHHHHH
Confidence 68999999998 8666 57888999998877778 887776778899999988773 1345556777888
Q ss_pred HHHHHHHcCCcEEEEe
Q 018446 280 MTKICKLLGLTALVEV 295 (355)
Q Consensus 280 L~~~A~~LGLeaLVEV 295 (355)
+.+.|.. .....+.|
T Consensus 119 l~~~a~~-~~~v~lrv 133 (386)
T 2yxx_A 119 WRELNPE-GVEYFIRV 133 (386)
T ss_dssp HHHHCCT-TCEEEEEE
T ss_pred HHHhcCc-CCeEEEEE
Confidence 7776654 56677776
No 425
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=63.46 E-value=3 Score=43.39 Aligned_cols=85 Identities=20% Similarity=0.171 Sum_probs=59.0
Q ss_pred EeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEE-------eccCCCCCCC------HHHHHHHHhcCCCCCeeccccc
Q 018446 182 EVKKASPSRGILREDFDPVEIARSYEKGGAACLSI-------LTDEKYFKGS------FENLEAVRSAGVKCPLLCKEFI 248 (355)
Q Consensus 182 EvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISV-------LTD~~fF~GS------~edL~~VR~a~v~lPVLrKDFI 248 (355)
++|+..|..-+|..+.--.+.|+.+.++||+++=| +|-..--+=. .-+...+++ ...+||+..-=|
T Consensus 315 ~ik~~~p~~~viaGNVaT~e~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~-~~~vpvIADGGI 393 (556)
T 4af0_A 315 WIKQTYPKIDVIAGNVVTREQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFAS-RFGIPCIADGGI 393 (556)
T ss_dssp HHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHG-GGTCCEEEESCC
T ss_pred HHHhhCCcceEEeccccCHHHHHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHH-HcCCCEEecCCc
Confidence 46777776545544433347889999999999955 4433222211 223333444 257899999999
Q ss_pred cCHHHHHHHHHcCCcchHH
Q 018446 249 VDAWQIYYARTKGADAVLL 267 (355)
Q Consensus 249 IdpyQI~eAr~~GADAVLL 267 (355)
-++..|..|.++|||+|.|
T Consensus 394 ~~sGDi~KAlaaGAd~VMl 412 (556)
T 4af0_A 394 GNIGHIAKALALGASAVMM 412 (556)
T ss_dssp CSHHHHHHHHHTTCSEEEE
T ss_pred CcchHHHHHhhcCCCEEEE
Confidence 9999999999999999986
No 426
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=63.42 E-value=6.2 Score=38.28 Aligned_cols=74 Identities=24% Similarity=0.276 Sum_probs=47.5
Q ss_pred cccc-ccCHHHHHHHHHcCC--------cchHHH---HhcCCHHHHHHHHHHHHHc--CCcEEEEeCCHHHHHHHhccCC
Q 018446 244 CKEF-IVDAWQIYYARTKGA--------DAVLLI---AAVLPDLDIRYMTKICKLL--GLTALVEVHDEREMDRVLGIEG 309 (355)
Q Consensus 244 rKDF-IIdpyQI~eAr~~GA--------DAVLLI---aaiL~~~~L~~L~~~A~~L--GLeaLVEVH~~eELerAl~l~g 309 (355)
||.+ .+-..|-|-++.-|+ |+||+- .++.+. +..-++.+++. .....|||.|.+|++.|+.+ |
T Consensus 175 RKT~PglR~l~kyAV~~GGg~nHR~gL~d~vlikdnHi~~~G~--i~~Av~~ar~~~p~~kIeVEVdtldea~eAl~a-G 251 (320)
T 3paj_A 175 RKTIPGLRSALKYAVACGGGYNHRIGVFDAYLIKENHIIACGG--IRQAISTAKQLNPGKPVEVETETLAELEEAISA-G 251 (320)
T ss_dssp SCCCTTCHHHHHHHHHHTTCBCCCSSSSSCEEECHHHHHHHTS--HHHHHHHHHHHSTTSCEEEEESSHHHHHHHHHT-T
T ss_pred cCCCccchHHHhhhHHhcCccceecccchhhccHHHHHHHhCC--HHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHc-C
Confidence 4443 233466677777777 455542 122221 33344444443 25678999999999999996 9
Q ss_pred CeEEEeeCCCC
Q 018446 310 IELIGINNRNL 320 (355)
Q Consensus 310 a~iIGINNRdL 320 (355)
+++|.+.|-++
T Consensus 252 aD~I~LDn~~~ 262 (320)
T 3paj_A 252 ADIIMLDNFSL 262 (320)
T ss_dssp CSEEEEESCCH
T ss_pred CCEEEECCCCH
Confidence 99999999544
No 427
>2bas_A YKUI protein; EAL domain, structural genom protein structure initiative, midwest center for structural genomics, MCSG, signaling protein; 2.61A {Bacillus subtilis} SCOP: c.1.33.1 d.110.6.2 PDB: 2w27_A*
Probab=63.34 E-value=7.6 Score=37.95 Aligned_cols=109 Identities=9% Similarity=0.081 Sum_probs=61.6
Q ss_pred eEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHH
Q 018446 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYA 257 (355)
Q Consensus 178 aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eA 257 (355)
.|+.||--.... ...-......+.+.+.|.. |+ -| -||..+..|..++...++.==+-+.|+-+-
T Consensus 142 ~l~lEItE~~~~----~~~~~~~~~l~~Lr~~G~~-ia--lD--DFG~g~ssl~~L~~l~~d~iKID~s~v~~~------ 206 (431)
T 2bas_A 142 RFVLEITEHNFE----GDIEQLYHMLAYYRTYGIK-IA--VD--NIGKESSNLDRIALLSPDLLKIDLQALKVS------ 206 (431)
T ss_dssp GEEEEECCTTCC----SCHHHHHHHHHHHHTTTCE-EE--EE--EETTTBCCHHHHHHHCCSEEEEECTTTC--------
T ss_pred eEEEEEECChhh----CCHHHHHHHHHHHHHCCCE-EE--EE--CCCCCcHHHHHHHhCCCCEEEECHHHHhhh------
Confidence 589999654432 1111233455666677743 22 23 355554455555442122222333343210
Q ss_pred HHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEE-eCCHHHHHHHhccCCCeE
Q 018446 258 RTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVE-VHDEREMDRVLGIEGIEL 312 (355)
Q Consensus 258 r~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVE-VH~~eELerAl~l~ga~i 312 (355)
..|.- ...-++.++.+|+++|+.+++| |.|+++++.+.++ |++.
T Consensus 207 ---~~~~~-------~~~il~~ii~la~~lg~~vvAEGVEt~~q~~~l~~l-G~d~ 251 (431)
T 2bas_A 207 ---QPSPS-------YEHVLYSISLLARKIGAALLYEDIEANFQLQYAWRN-GGRY 251 (431)
T ss_dssp -----CCH-------HHHHHHHHHHHHHHHTCEEEEECCCSHHHHHHHHHT-TEEE
T ss_pred ---hcCHh-------HHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHc-CCCE
Confidence 01100 0123677899999999999998 9999999999987 7764
No 428
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=63.32 E-value=4.6 Score=35.58 Aligned_cols=74 Identities=16% Similarity=0.098 Sum_probs=51.5
Q ss_pred HHHHHHcCceEEEEeccCCCCCCC------HHHHHHHHhcCC-----CCCeeccccccCHHHHHHHHHcCCcchHHHHhc
Q 018446 203 ARSYEKGGAACLSILTDEKYFKGS------FENLEAVRSAGV-----KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAV 271 (355)
Q Consensus 203 A~~Ye~~GAaaISVLTD~~fF~GS------~edL~~VR~a~v-----~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaai 271 (355)
.+.|. .|++.+-+.+=..-|.|. ++.++.+|+. . ++|+ .=++.|++-++.++..+|||+|...-++
T Consensus 134 ~~~~~-~~~d~vl~~~~~pg~~g~~~~~~~~~~i~~l~~~-~~~~~~~~pi-~v~GGI~~~n~~~~~~aGad~vvvgSaI 210 (230)
T 1rpx_A 134 IEYVL-DAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKI-CAERGLNPWI-EVDGGVGPKNAYKVIEAGANALVAGSAV 210 (230)
T ss_dssp GTTTT-TTCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHH-HHHHTCCCEE-EEESSCCTTTHHHHHHHTCCEEEESHHH
T ss_pred HHHHH-hhCCEEEEEEEcCCCCCccccHHHHHHHHHHHHH-HHhcCCCceE-EEECCCCHHHHHHHHHcCCCEEEEChhh
Confidence 33443 478888555543334442 4666777764 3 6775 4599999999999999999999999888
Q ss_pred CCHHHHHH
Q 018446 272 LPDLDIRY 279 (355)
Q Consensus 272 L~~~~L~~ 279 (355)
...++...
T Consensus 211 ~~a~dp~~ 218 (230)
T 1rpx_A 211 FGAPDYAE 218 (230)
T ss_dssp HTSSCHHH
T ss_pred hCCCCHHH
Confidence 87555443
No 429
>3e5p_A Alanine racemase; ALR, PLP, SCP, isomerase, pyridoxal phosph; HET: PLP EPE 2PE; 2.50A {Enterococcus faecalis} PDB: 3e6e_A*
Probab=63.27 E-value=18 Score=35.00 Aligned_cols=105 Identities=21% Similarity=0.226 Sum_probs=71.7
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHH
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDI 277 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L 277 (355)
...++|+...+.|+..+.|. +++....+|+++.+.|+|.=-. +.+-++.++..++ ++..+=+.+++
T Consensus 47 g~~~va~~l~~~G~~~f~va--------~~~Ea~~lr~~G~~~~Ilvlg~-~~~~~~~~~~~~~-----i~~~V~s~~~l 112 (371)
T 3e5p_A 47 GAVESAKAAKKGGATGFCVA--------LLDEAIELREAGVQDPILILSV-VDLAYVPLLIQYD-----LSVTVATQEWL 112 (371)
T ss_dssp CHHHHHHHHHHTTCCCEEES--------SHHHHHHHHTTTCCSCEEEEEE-CCGGGHHHHHHHT-----CEEEECCHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEE--------eHHHHHHHHhcCCCCCEEEEcC-CCHHHHHHHHHCC-----CEEEECCHHHH
Confidence 35689999889999887765 4778888888777778764322 4555666666543 24556677788
Q ss_pred HHH-HHHHHHcC--CcEEEEeCC--------H-HHHHHHh----ccCCCeEEEee
Q 018446 278 RYM-TKICKLLG--LTALVEVHD--------E-REMDRVL----GIEGIELIGIN 316 (355)
Q Consensus 278 ~~L-~~~A~~LG--LeaLVEVH~--------~-eELerAl----~l~ga~iIGIN 316 (355)
+.| .+.|.+.| +.++++|.+ . +|+..++ .+++.++.||-
T Consensus 113 ~~l~~~~a~~~~~~~~V~lkvdtGm~R~G~~~~ee~~~~~~~i~~~~~l~l~Gl~ 167 (371)
T 3e5p_A 113 EAALQQLTPESNTPLRVHLKVDTGMGRIGFLTPEETKQAVRFVQSHKEFLWEGIF 167 (371)
T ss_dssp HHHHHHHCSCCSCCBCEEEEBCSSSCSSSBCSSHHHHHHHHHHHHSTTBCCCEEE
T ss_pred HHHHHHHHHHcCCceEEEEEECCCCCcCCCCCHHHHHHHHHHHHhCCCccEEEEE
Confidence 888 78887665 578888875 2 5554432 33467777774
No 430
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=62.46 E-value=7.2 Score=34.52 Aligned_cols=108 Identities=14% Similarity=0.184 Sum_probs=66.0
Q ss_pred eEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccc-cCHHHHHH
Q 018446 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFI-VDAWQIYY 256 (355)
Q Consensus 178 aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFI-IdpyQI~e 256 (355)
.++.|+--..... ..-......+.+.+.|.. |+ -| -|+..+..+..++. +|+ |+| ||.--+..
T Consensus 128 ~l~lEitE~~~~~----~~~~~~~~l~~L~~~G~~-ia--lD--dfG~g~s~l~~L~~----l~~---d~iKiD~~~v~~ 191 (250)
T 4f3h_A 128 RLWLQTPESKVFT----HLRNAQQFLASVSAMGCK-VG--LE--QFGSGLDSFQLLAH----FQP---AFLKLDRSITGD 191 (250)
T ss_dssp GEEEEEEHHHHHH----SHHHHHHHHHHHHTTTCE-EE--EE--EETSSTHHHHHHTT----SCC---SEEEECHHHHTT
T ss_pred eEEEEEechhhhc----CHHHHHHHHHHHHHCCCE-EE--Ee--CCCCCchHHHHHhh----CCC---CEEEECHHHHHh
Confidence 5889996554321 111233445666666632 22 23 38888888887754 242 444 45433311
Q ss_pred HHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEE-eCCHHHHHHHhccCCCeE
Q 018446 257 ARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVE-VHDEREMDRVLGIEGIEL 312 (355)
Q Consensus 257 Ar~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVE-VH~~eELerAl~l~ga~i 312 (355)
...|.- ...-++.++.+|+++|+.+++| |.|.++++.+..+ |++.
T Consensus 192 ---~~~~~~-------~~~~l~~i~~~a~~l~~~viaeGVEt~~~~~~l~~~-G~~~ 237 (250)
T 4f3h_A 192 ---IASARE-------SQEKIREITSRAQPTGILTVAEFVADAQSMSSFFTA-GVDY 237 (250)
T ss_dssp ---TTTCSH-------HHHHHHHTHHHHHHHTCEEEECCCCCHHHHHHHHHH-TCSE
T ss_pred ---HhcChh-------hHHHHHHHHHHHHHcCCEEEEeccCCHHHHHHHHHc-CCCE
Confidence 111110 1234678899999999999998 8999999999887 8764
No 431
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=62.13 E-value=5.2 Score=37.42 Aligned_cols=56 Identities=18% Similarity=0.304 Sum_probs=39.4
Q ss_pred HHHHHHHHhcCCCCCeecccccc-CHHHHHHHHHcCCcchHH---HHhcCCHHHHHHHHHHHH
Q 018446 227 FENLEAVRSAGVKCPLLCKEFIV-DAWQIYYARTKGADAVLL---IAAVLPDLDIRYMTKICK 285 (355)
Q Consensus 227 ~edL~~VR~a~v~lPVLrKDFII-dpyQI~eAr~~GADAVLL---IaaiL~~~~L~~L~~~A~ 285 (355)
.+.++.+|+. +++||+. -|.| ++-|+.++.. +||+|+. |+..+.+...+++.+...
T Consensus 188 ~~~v~~vr~~-~~~Pv~v-GfGIst~e~a~~~~~-~ADGVIVGSAiVk~i~~~~~~~~~~~~~ 247 (252)
T 3tha_A 188 QDKVKEIRSF-TNLPIFV-GFGIQNNQDVKRMRK-VADGVIVGTSIVKCFKQGNLDIIMKDIE 247 (252)
T ss_dssp HHHHHHHHTT-CCSCEEE-ESSCCSHHHHHHHTT-TSSEEEECHHHHHHTTSSCHHHHHHHHH
T ss_pred HHHHHHHHHh-cCCcEEE-EcCcCCHHHHHHHHh-cCCEEEECHHHHHHHHhcCHHHHHHHHH
Confidence 3567888886 7999887 8999 8899987765 6999965 666665433344444433
No 432
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=62.01 E-value=17 Score=35.46 Aligned_cols=84 Identities=10% Similarity=0.184 Sum_probs=64.3
Q ss_pred HHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeecccc-ccCHHHHHHHHHcCC-cchHH-HHhcCCHHHHHHHH
Q 018446 205 SYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEF-IVDAWQIYYARTKGA-DAVLL-IAAVLPDLDIRYMT 281 (355)
Q Consensus 205 ~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDF-IIdpyQI~eAr~~GA-DAVLL-IaaiL~~~~L~~L~ 281 (355)
..++.+ |.-+ |+.+-..+++.+..+++. +++||..-|- +-+++++.+....|| |+|++ +..+=+-.+...+.
T Consensus 279 ~l~~~~---i~~i-EeP~~~~d~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~ia 353 (427)
T 2pa6_A 279 LVDEYP---IVSI-EDPFHEEDFEGFAMITKE-LDIQIVGDDLFVTNVERLRKGIEMKAANALLLKVNQIGTLSEAVDAA 353 (427)
T ss_dssp HHHHSC---EEEE-ECCSCTTCHHHHHHHHHH-SSSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHH
T ss_pred HHhhCC---CcEE-EcCCChhhHHHHHHHHhh-CCCeEEeCccccCCHHHHHHHHHhCCCCEEEEcccccCCHHHHHHHH
Confidence 444555 4444 555678899999999986 8999999996 555999999887775 77776 44444556778899
Q ss_pred HHHHHcCCcEEE
Q 018446 282 KICKLLGLTALV 293 (355)
Q Consensus 282 ~~A~~LGLeaLV 293 (355)
++|+..|+.+.+
T Consensus 354 ~lA~~~g~~~~~ 365 (427)
T 2pa6_A 354 QLAFRNGYGVVV 365 (427)
T ss_dssp HHHHTTTCEEEE
T ss_pred HHHHHcCCeEEE
Confidence 999999999877
No 433
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=61.77 E-value=12 Score=36.97 Aligned_cols=72 Identities=15% Similarity=0.056 Sum_probs=50.2
Q ss_pred HHHHHHHHcCceEEEEeccCC----------CCCCCHHHHHHHHhc--CCCCCeeccccccCHHHHHHHHHcCCcchHHH
Q 018446 201 EIARSYEKGGAACLSILTDEK----------YFKGSFENLEAVRSA--GVKCPLLCKEFIVDAWQIYYARTKGADAVLLI 268 (355)
Q Consensus 201 ~iA~~Ye~~GAaaISVLTD~~----------fF~GS~edL~~VR~a--~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLI 268 (355)
+.|+...+.||++|.|=..+. |-...++-+..++.+ .+++||+.-==|-++-++..|.++|||+|.+=
T Consensus 286 ~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal~~GA~~v~vG 365 (491)
T 1zfj_A 286 EGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGNAVMLG 365 (491)
T ss_dssp HHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHcCCCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHHHcCCcceeeC
Confidence 566777889999998742211 111224555555431 15799998877889999999999999999884
Q ss_pred HhcC
Q 018446 269 AAVL 272 (355)
Q Consensus 269 aaiL 272 (355)
-+++
T Consensus 366 ~~~~ 369 (491)
T 1zfj_A 366 SMFA 369 (491)
T ss_dssp TTTT
T ss_pred HHhh
Confidence 4444
No 434
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=61.38 E-value=8.7 Score=33.47 Aligned_cols=54 Identities=19% Similarity=0.258 Sum_probs=36.2
Q ss_pred HHHHHHHcCCcchHHHHhcCC--------------HHHHHHHHHHHHHcCCcEEEEeCC---HHHHHHHhc
Q 018446 253 QIYYARTKGADAVLLIAAVLP--------------DLDIRYMTKICKLLGLTALVEVHD---EREMDRVLG 306 (355)
Q Consensus 253 QI~eAr~~GADAVLLIaaiL~--------------~~~L~~L~~~A~~LGLeaLVEVH~---~eELerAl~ 306 (355)
.|..|..+||+.|.+...... -+.|.++.++|.+.|+...+|-|. .+++.+.++
T Consensus 81 ~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~l~~ 151 (254)
T 3ayv_A 81 GLDRAAELGADRAVFHSGIPHGRTPEEALERALPLAEALGLVVRRARTLGVRLLLENSHEPHPEALRPVLE 151 (254)
T ss_dssp HHHHHHHTTCSEEEEECCCCTTCCHHHHHHTHHHHHHHTHHHHHHHHHHTCEEEEECSSCSSGGGTHHHHH
T ss_pred HHHHHHHhCCCEEEECCCCCcccccccHHHHHHHHHHHHHHHHHHHhhcCCEEEEcCCCCCCHHHHHHHHH
Confidence 456677788877655433221 124567888999999999999985 555555543
No 435
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=61.17 E-value=16 Score=36.12 Aligned_cols=92 Identities=14% Similarity=0.208 Sum_probs=68.7
Q ss_pred CCHHHHH---HHHHH-cCceEEEEeccCCCCCCCHHHHHHHHhcCC--CCCeeccc-cccCHHHHHHHHHcC-CcchHH-
Q 018446 197 FDPVEIA---RSYEK-GGAACLSILTDEKYFKGSFENLEAVRSAGV--KCPLLCKE-FIVDAWQIYYARTKG-ADAVLL- 267 (355)
Q Consensus 197 ~Dp~~iA---~~Ye~-~GAaaISVLTD~~fF~GS~edL~~VR~a~v--~lPVLrKD-FIIdpyQI~eAr~~G-ADAVLL- 267 (355)
+++.+.. +...+ .+ |.-+ |+.+-..+++.+..+++. + .+||..-| |+.+++++.+....| +|+|++
T Consensus 279 ~t~~eai~~~~~l~~~~~---i~~i-EePl~~~d~~~~~~l~~~-~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik 353 (444)
T 1w6t_A 279 RTSAEQIDYLEELVNKYP---IITI-EDGMDENDWDGWKALTER-LGKKVQLVGDDFFVTNTDYLARGIQEGAANSILIK 353 (444)
T ss_dssp ECHHHHHHHHHHHHHHSC---EEEE-ESCSCTTCHHHHHHHHHH-HTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEEC
T ss_pred CCHHHHHHHHHHHHHhCC---cEEE-ECCCChhhHHHHHHHHHh-hCCCCeEEeCCcccCCHHHHHHHHHcCCCCEEEEc
Confidence 4555443 44333 44 4444 555778999999999985 6 89999999 599999999988777 577777
Q ss_pred HHhcCCHHHHHHHHHHHHHcCCcEEE
Q 018446 268 IAAVLPDLDIRYMTKICKLLGLTALV 293 (355)
Q Consensus 268 IaaiL~~~~L~~L~~~A~~LGLeaLV 293 (355)
+..+=+-.+...+.++|+..|+.+.+
T Consensus 354 ~~~~GGitea~~ia~lA~~~g~~v~~ 379 (444)
T 1w6t_A 354 VNQIGTLTETFEAIEMAKEAGYTAVV 379 (444)
T ss_dssp HHHHCSHHHHHHHHHHHHHTTCEEEE
T ss_pred ccccCCHHHHHHHHHHHHHCCCeEEe
Confidence 44444556778899999999999888
No 436
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=60.85 E-value=21 Score=36.04 Aligned_cols=136 Identities=13% Similarity=0.131 Sum_probs=83.1
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCC--------CCCCHHHHHHHHhcC--CCCCeecc--c-ccc-------CHHHHHHH
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKY--------FKGSFENLEAVRSAG--VKCPLLCK--E-FIV-------DAWQIYYA 257 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~f--------F~GS~edL~~VR~a~--v~lPVLrK--D-FII-------dpyQI~eA 257 (355)
|-..+|+.+.+.|...|=+=. +-- -.+.++.++.+++.. +.+.+|.. . ... ....|..|
T Consensus 31 dkl~Ia~~L~~~Gv~~IE~g~-~atF~~~~r~~~~d~~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~ddv~~~~v~~a 109 (464)
T 2nx9_A 31 DMLPIAQQLDQIGYWSLECWG-GATFDSCIRFLGEDPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDTFVERA 109 (464)
T ss_dssp GTGGGHHHHHTSCCSEEEEEE-TTHHHHHHHTTCCCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCc-CccccchhhccCCCHHHHHHHHHHhCCCCeEEEEeccccccCcccccchhhHHHHHHH
Confidence 455788888888888876621 110 123467777777631 22333331 1 111 13467789
Q ss_pred HHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeC-------CHHH----HHHHhccCCCeEEEeeCCCCCccccC
Q 018446 258 RTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH-------DERE----MDRVLGIEGIELIGINNRNLETFEVD 326 (355)
Q Consensus 258 r~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH-------~~eE----LerAl~l~ga~iIGINNRdL~TfevD 326 (355)
..+|+|.|-+..+.=+-+.+...+++|++.|+++-+-+| |.+. ++++.++ ||+.|+|-.-.= -..
T Consensus 110 ~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~-Gad~I~l~DT~G---~~~ 185 (464)
T 2nx9_A 110 VKNGMDVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAEL-GVDSIALKDMAG---ILT 185 (464)
T ss_dssp HHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHT-TCSEEEEEETTS---CCC
T ss_pred HhCCcCEEEEEEecCHHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHC-CCCEEEEcCCCC---CcC
Confidence 999999877555544446788999999999999876663 4443 3345554 999998853211 123
Q ss_pred hhhHHhhhcccc
Q 018446 327 NSNTKKLLEGER 338 (355)
Q Consensus 327 l~~t~~L~~~~~ 338 (355)
+..+.+|...++
T Consensus 186 P~~v~~lv~~l~ 197 (464)
T 2nx9_A 186 PYAAEELVSTLK 197 (464)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 666666665433
No 437
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=60.80 E-value=9.4 Score=35.59 Aligned_cols=138 Identities=19% Similarity=0.169 Sum_probs=80.7
Q ss_pred CCccHHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCce--------EEEEe-ccCCCCCCCHHH
Q 018446 159 PARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAA--------CLSIL-TDEKYFKGSFEN 229 (355)
Q Consensus 159 p~rdF~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAa--------aISVL-TD~~fF~GS~ed 229 (355)
..+.+..++.. ....|+.-.|..|.- -.. .+++...+|+. ++-+- +.-.+|+|-.+.
T Consensus 106 ~t~~~v~a~~~------~~~~~~~tRkt~p~~-------r~~-~~~A~~~gG~~~hr~~l~d~vlik~~Hi~~~g~~~~a 171 (273)
T 2b7n_A 106 LTSRFVEALNS------HKVRLLDTRKTRPLL-------RIF-EKYSVLNGGASNHRLGLDDALMLKDTHLRHVKDLKSF 171 (273)
T ss_dssp HHHHHHHHHCC------SSSEEECCSCCCTTC-------HHH-HHHHHHTTTCCCCCSSTTTCEEECHHHHTTCSSHHHH
T ss_pred HHHHHHHHhCC------CCeEEEEcCCCChhh-------HHH-HHHHHHhCCCcceEcCccceEEeeCCHHHHhCCHHHH
Confidence 35567776653 246888888887742 122 12232345655 22211 112345444677
Q ss_pred HHHHHhcCCC-CC--eeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeC---CHHHHHH
Q 018446 230 LEAVRSAGVK-CP--LLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDR 303 (355)
Q Consensus 230 L~~VR~a~v~-lP--VLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH---~~eELer 303 (355)
++.+|+.... ++ +.+. +.-|+.+|..+|||.|.| .-++.++++.+.+....-.-++.+|+. |++.+..
T Consensus 172 i~~~r~~~~~~~~i~vev~----tlee~~~A~~aGaD~I~l--d~~~~~~l~~~v~~l~~~~~~~~i~AsGGI~~~ni~~ 245 (273)
T 2b7n_A 172 LTHARKNLPFTAKIEIECE----SFEEAKNAMNAGADIVMC--DNLSVLETKEIAAYRDAHYPFVLLEASGNISLESINA 245 (273)
T ss_dssp HHHHGGGSCTTCCEEEEES----SHHHHHHHHHHTCSEEEE--ETCCHHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHH
T ss_pred HHHHHHhCCCCceEEEEcC----CHHHHHHHHHcCCCEEEE--CCCCHHHHHHHHHHhhccCCCcEEEEECCCCHHHHHH
Confidence 8888875211 22 2222 346888999999999987 347778888777765542112445532 5677777
Q ss_pred HhccCCCeEEEeeC
Q 018446 304 VLGIEGIELIGINN 317 (355)
Q Consensus 304 Al~l~ga~iIGINN 317 (355)
..+. |++.||+-.
T Consensus 246 ~~~a-GaD~i~vGs 258 (273)
T 2b7n_A 246 YAKS-GVDAISVGA 258 (273)
T ss_dssp HHTT-TCSEEECTH
T ss_pred HHHc-CCcEEEEcH
Confidence 7775 888888743
No 438
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=60.71 E-value=36 Score=32.55 Aligned_cols=111 Identities=18% Similarity=0.267 Sum_probs=72.9
Q ss_pred HHHHHcCceEEEEeccCCCC-CCCH----HHHHHHHhcCCCCC----eeccccccCHHHHHH----HHHcCCcchHHHHh
Q 018446 204 RSYEKGGAACLSILTDEKYF-KGSF----ENLEAVRSAGVKCP----LLCKEFIVDAWQIYY----ARTKGADAVLLIAA 270 (355)
Q Consensus 204 ~~Ye~~GAaaISVLTD~~fF-~GS~----edL~~VR~a~v~lP----VLrKDFIIdpyQI~e----Ar~~GADAVLLIaa 270 (355)
+...+.||+.|.+.-+-.++ .|.+ +++..|+++ +.-| ||--++ ++.-||.. |..+|||-|=--..
T Consensus 133 ~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a-~~~~~lKVIlEt~~-Lt~eei~~A~~ia~eaGADfVKTSTG 210 (288)
T 3oa3_A 133 KRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLA-AKDAILKVILETSQ-LTADEIIAGCVLSSLAGADYVKTSTG 210 (288)
T ss_dssp HHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHH-TTTSEEEEECCGGG-CCHHHHHHHHHHHHHTTCSEEECCCS
T ss_pred HHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHH-hcCCCceEEEECCC-CCHHHHHHHHHHHHHcCCCEEEcCCC
Confidence 44557899999988775443 3655 467778875 4434 333343 35556444 45789999866532
Q ss_pred c----CCHHHHHHHHHHHHH--cCCcEEEE--eCCHHHHHHHhccCCCeEEEeeC
Q 018446 271 V----LPDLDIRYMTKICKL--LGLTALVE--VHDEREMDRVLGIEGIELIGINN 317 (355)
Q Consensus 271 i----L~~~~L~~L~~~A~~--LGLeaLVE--VH~~eELerAl~l~ga~iIGINN 317 (355)
. -+.++.+-|.+.... -.+..... ++|.+++...+++ ||.-||..+
T Consensus 211 f~~~GAT~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~a-GA~RiGtS~ 264 (288)
T 3oa3_A 211 FNGPGASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRA-GAERLGASA 264 (288)
T ss_dssp SSSCCCCHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHT-TCSEEEESC
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHc-CCceeehhh
Confidence 2 234577767666653 33444554 7999999999997 999999753
No 439
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=60.57 E-value=20 Score=33.19 Aligned_cols=120 Identities=9% Similarity=0.036 Sum_probs=80.4
Q ss_pred CCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHH-HHhcCCC--CCeeccccccCHHHHHHHHHcCCcchHH
Q 018446 191 GILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEA-VRSAGVK--CPLLCKEFIVDAWQIYYARTKGADAVLL 267 (355)
Q Consensus 191 G~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~-VR~a~v~--lPVLrKDFIIdpyQI~eAr~~GADAVLL 267 (355)
+.+..++.+.++...+.+.|... +|+..+.+++...+++.. +++. .+ ..+..=|.-...-++......|.-+|-+
T Consensus 48 ~~~~~~~~~e~l~~~m~~~GI~~-~Vlvq~~~~~~dN~~ll~~l~~~-~~r~~Gva~vdp~~~~~eL~~l~~~G~rGvR~ 125 (303)
T 4d9a_A 48 KYLPRDAGPDMLFALRDHLGFAR-NVIVQASCHGTDNAATLDAIARA-QGKARGIAVVDPAIDEAELAALHEGGMRGIRF 125 (303)
T ss_dssp SCCBCCBCHHHHHHHHHHHTCSE-EEEECCGGGTTCCHHHHHHHHHT-TTSEEEEECCCTTCCHHHHHHHHHTTEEEEEE
T ss_pred CCcCCCCCHHHHHHHHHHcCCCe-EEEeccccccccHHHHHHHHHhC-CCcEEEEEEeCCCCCHHHHHHHHHCCCCEEEe
Confidence 34556889999999999999764 666777777777777766 5553 21 1233334444567888877888888776
Q ss_pred HH-----hcCCHHHHHHHHHHHHHcCCcEEEEeC--CHHHHHHHhccCCCeEE
Q 018446 268 IA-----AVLPDLDIRYMTKICKLLGLTALVEVH--DEREMDRVLGIEGIELI 313 (355)
Q Consensus 268 Ia-----aiL~~~~L~~L~~~A~~LGLeaLVEVH--~~eELerAl~l~ga~iI 313 (355)
.. ..+.+.++..+++.|.+ |+...+-+. ...++...+..-+.++|
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~l~~-gl~v~l~~~~~~l~~l~~~~~~~~~~iV 177 (303)
T 4d9a_A 126 NFLKRLVDDAPKDKFLEVAGRLPA-GWHVVIYFEADILEELRPFMDAIPVPIV 177 (303)
T ss_dssp ECCTTTCSCCCHHHHHHHHTSCCT-TCEEEEECCGGGHHHHHHHHHHCSSCEE
T ss_pred ecccCCccccCHHHHHHHHHHHhc-CCEEEEecccccHHHHHHHHHHCCCcEE
Confidence 54 45678889999999888 987766553 45556555432244444
No 440
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=60.56 E-value=6.8 Score=38.07 Aligned_cols=76 Identities=18% Similarity=0.105 Sum_probs=56.2
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCC---C--CCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYF---K--GSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL 272 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF---~--GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL 272 (355)
..++|+..++.|++.|.|-.- .+. . ...+.+..+|++ +++||+.--=| ++.+..++...| ||+|.+-=++|
T Consensus 258 ~~~la~~le~~Gvd~i~v~~~-~~~~~~~~~~~~~~~~~vr~~-~~iPvi~~G~i-~~~~a~~~l~~g~aD~V~~gR~~l 334 (376)
T 1icp_A 258 GLYMVESLNKYDLAYCHVVEP-RMKTAWEKIECTESLVPMRKA-YKGTFIVAGGY-DREDGNRALIEDRADLVAYGRLFI 334 (376)
T ss_dssp HHHHHHHHGGGCCSEEEEECC-SCCC------CCCCSHHHHHH-CCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHH
T ss_pred HHHHHHHHHHcCCCEEEEcCC-cccCCCCccccHHHHHHHHHH-cCCCEEEeCCC-CHHHHHHHHHCCCCcEEeecHHHH
Confidence 568999999999999998642 111 1 233556788886 89999876666 899999999998 99998866666
Q ss_pred CHHHH
Q 018446 273 PDLDI 277 (355)
Q Consensus 273 ~~~~L 277 (355)
.+-++
T Consensus 335 ~~P~l 339 (376)
T 1icp_A 335 SNPDL 339 (376)
T ss_dssp HCTTH
T ss_pred hCccH
Confidence 54343
No 441
>2j66_A BTRK, decarboxylase; butirosin, AHBA biosynthesis, lyase; HET: PLP; 1.65A {Bacillus circulans}
Probab=60.19 E-value=96 Score=29.67 Aligned_cols=85 Identities=12% Similarity=0.162 Sum_probs=63.3
Q ss_pred HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCC-eeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHH
Q 018446 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCP-LLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIR 278 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lP-VLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~ 278 (355)
..+++.+.+.| ..+-| .|...+..+|+++++.+ |+.-=...++-++.+|..+|.- +..+=+.++++
T Consensus 54 ~~v~~~l~~~G-~g~~v--------as~~E~~~~~~~G~~~~~I~~~g~~k~~~~i~~a~~~~v~----~~~vds~~el~ 120 (428)
T 2j66_A 54 IHLAKLFRQWG-LGVEV--------ASAGELALARHAGFSAENIIFSGPGKKRSELEIAVQSGIY----CIIAESVEELF 120 (428)
T ss_dssp HHHHHHHHHTT-CEEEE--------SSHHHHHHHHHTTCCGGGEEECCSCCCHHHHHHHHHHTCS----EEEECSHHHHH
T ss_pred HHHHHHHHHcC-CeEEE--------eCHHHHHHHHHcCCCcCeEEEeCCCCCHHHHHHHHHCCCC----EEEECCHHHHH
Confidence 36889998888 45444 56788999998876655 7765555677889999887631 44566777899
Q ss_pred HHHHHHHHcC--CcEEEEeCC
Q 018446 279 YMTKICKLLG--LTALVEVHD 297 (355)
Q Consensus 279 ~L~~~A~~LG--LeaLVEVH~ 297 (355)
.|.+.|.++| ..+++.|..
T Consensus 121 ~l~~~a~~~~~~~~V~lrvn~ 141 (428)
T 2j66_A 121 YIEELAEKENKTARVAIRINP 141 (428)
T ss_dssp HHHHHHHHHTCCEEEEEEEEC
T ss_pred HHHHHHHhhCCCceEEEEEcC
Confidence 9999998888 668888874
No 442
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=60.10 E-value=25 Score=34.04 Aligned_cols=86 Identities=12% Similarity=0.132 Sum_probs=66.5
Q ss_pred HHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHHHHHH
Q 018446 203 ARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLDIRYM 280 (355)
Q Consensus 203 A~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~L~~L 280 (355)
++..+..|.. .-|+.+-..+++.+..+|+. +.+||..-+-+.+.+++.+....| +|.|.+=+.-+ +-.+...+
T Consensus 209 ~~~l~~~~i~----~iEeP~~~~d~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~i 283 (388)
T 3qld_A 209 LRQLDAYDLQ----FIEQPLPEDDWFDLAKLQAS-LRTPVCLDESVRSVRELKLTARLGAARVLNVKPGRLGGFGATLRA 283 (388)
T ss_dssp HHHGGGGCCS----CEECCSCTTCHHHHHHHHHH-CSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HHHHhhCCCc----EEECCCCcccHHHHHHHHHh-CCCCEEeCCCCCCHHHHHHHHHcCCCCEEEECchhhCCHHHHHHH
Confidence 5566655532 33556677899999999986 899999999999999999988877 57776644333 45577889
Q ss_pred HHHHHHcCCcEEE
Q 018446 281 TKICKLLGLTALV 293 (355)
Q Consensus 281 ~~~A~~LGLeaLV 293 (355)
.++|+..|+.+.+
T Consensus 284 a~~A~~~gi~~~~ 296 (388)
T 3qld_A 284 LDVAGEAGMAAWV 296 (388)
T ss_dssp HHHHHHTTCEEEE
T ss_pred HHHHHHCCCeEEe
Confidence 9999999999854
No 443
>2o0t_A Diaminopimelate decarboxylase; PLP binding enzyme, lysine biosynthesis, STRU genomics, TB structural genomics consortium, TBSGC; HET: LLP; 2.33A {Mycobacterium tuberculosis} PDB: 1hkv_A* 1hkw_A
Probab=59.90 E-value=98 Score=30.31 Aligned_cols=85 Identities=19% Similarity=0.151 Sum_probs=65.2
Q ss_pred HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCC-CCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHH
Q 018446 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVK-CPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIR 278 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~-lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~ 278 (355)
..+++.+.+.|+ ++-| .|...+..+|+++++ -+|+.-=...++-.|.+|..+|.+. ..+=+.++|+
T Consensus 79 ~~v~~~l~~~G~-g~~v--------as~~E~~~~~~~G~~~~~I~~~g~~k~~~~i~~a~~~gv~~----i~vds~~el~ 145 (467)
T 2o0t_A 79 SEVARWISEEGL-CLDV--------CTGGELAVALHASFPPERITLHGNNKSVSELTAAVKAGVGH----IVVDSMTEIE 145 (467)
T ss_dssp HHHHHHHHHHTC-EEEE--------CSHHHHHHHHHTTCCGGGEEECCTTCCHHHHHHHHHHTCSE----EEECSHHHHH
T ss_pred HHHHHHHHHcCC-eEEE--------eCHHHHHHHHHcCCCcccEEEeCCCCCHHHHHHHHHCCCCE----EEECCHHHHH
Confidence 468888888897 6555 567788888887765 5787766667888999999988762 2566778899
Q ss_pred HHHHHHHHcC--CcEEEEeCC
Q 018446 279 YMTKICKLLG--LTALVEVHD 297 (355)
Q Consensus 279 ~L~~~A~~LG--LeaLVEVH~ 297 (355)
.|.+.|.++| ..+++.|.+
T Consensus 146 ~l~~~a~~~~~~~~v~lrvn~ 166 (467)
T 2o0t_A 146 RLDAIAGEAGIVQDVLVRLTV 166 (467)
T ss_dssp HHHHHHHHHTCCEEEEEEEEC
T ss_pred HHHHHHHhhCCCCeEEEEEcC
Confidence 9999888875 468888864
No 444
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=59.66 E-value=8.5 Score=36.40 Aligned_cols=61 Identities=15% Similarity=0.136 Sum_probs=44.4
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCH----HHHHHHHhcCCCCCeeccc
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSF----ENLEAVRSAGVKCPLLCKE 246 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~----edL~~VR~a~v~lPVLrKD 246 (355)
++..||+=+- + | ..+..++++..++.||+|+.|++ |-|+.-+. ++++.|.++ +++||+-=+
T Consensus 80 grvpViaGvg--~-~------t~~ai~la~~A~~~Gadavlv~~-P~y~~~s~~~l~~~f~~va~a-~~lPiilYn 144 (316)
T 3e96_A 80 GRALVVAGIG--Y-A------TSTAIELGNAAKAAGADAVMIHM-PIHPYVTAGGVYAYFRDIIEA-LDFPSLVYF 144 (316)
T ss_dssp TSSEEEEEEC--S-S------HHHHHHHHHHHHHHTCSEEEECC-CCCSCCCHHHHHHHHHHHHHH-HTSCEEEEE
T ss_pred CCCcEEEEeC--c-C------HHHHHHHHHHHHhcCCCEEEEcC-CCCCCCCHHHHHHHHHHHHHh-CCCCEEEEe
Confidence 5678999883 2 2 23678999999999999999986 45666564 556677665 688876554
No 445
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=59.65 E-value=10 Score=34.97 Aligned_cols=72 Identities=17% Similarity=0.086 Sum_probs=49.8
Q ss_pred CHHHHHHHHHHcCc---eEEEEeccCCCCCCCHHHHHHHHhcCC-CCCeeccccccCHHHHHHHHHcCCcchHHHHhcCC
Q 018446 198 DPVEIARSYEKGGA---ACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLP 273 (355)
Q Consensus 198 Dp~~iA~~Ye~~GA---aaISVLTD~~fF~GS~edL~~VR~a~v-~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~ 273 (355)
+|. .++.|.+.|. ..+-.|.- .--.+..+.++.+|+. + ++||..===|=++-|+.++.. |||+|.+=-++..
T Consensus 140 ~~~-~~~~~a~~g~~~~~~~VYl~s-~G~~~~~~~i~~i~~~-~~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGSa~v~ 215 (240)
T 1viz_A 140 NMD-DIVAYARVSELLQLPIFYLEY-SGVLGDIEAVKKTKAV-LETSTLFYGGGIKDAETAKQYAE-HADVIVVGNAVYE 215 (240)
T ss_dssp CHH-HHHHHHHHHHHTTCSEEEEEC-TTSCCCHHHHHHHHHT-CSSSEEEEESSCCSHHHHHHHHT-TCSEEEECTHHHH
T ss_pred CHH-HHHHHHHhCcccCCCEEEEeC-CCccChHHHHHHHHHh-cCCCCEEEEeccCCHHHHHHHHh-CCCEEEEChHHHh
Confidence 566 7778887664 12223332 2346789999999986 7 899776544556788888777 9999988655554
No 446
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=59.59 E-value=21 Score=34.00 Aligned_cols=127 Identities=14% Similarity=0.100 Sum_probs=78.6
Q ss_pred CHHHHHH-HHHHcCceEEEEeccCCCCCCC---HHHHHHHHhc-----C---CCCCeeccccccCHHHHHHHHHcCCcch
Q 018446 198 DPVEIAR-SYEKGGAACLSILTDEKYFKGS---FENLEAVRSA-----G---VKCPLLCKEFIVDAWQIYYARTKGADAV 265 (355)
Q Consensus 198 Dp~~iA~-~Ye~~GAaaISVLTD~~fF~GS---~edL~~VR~a-----~---v~lPVLrKDFIIdpyQI~eAr~~GADAV 265 (355)
+-.++++ .+.+.|...|=|= ||.-+ ++.+..+++. . +.+..|.+-- --|..|..+|+|.|
T Consensus 42 ~k~~i~~~~L~~~Gv~~IE~g----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~~~----~~i~~a~~~g~~~v 113 (337)
T 3ble_A 42 EKLNIAKFLLQKLNVDRVEIA----SARVSKGELETVQKIMEWAATEQLTERIEILGFVDGN----KTVDWIKDSGAKVL 113 (337)
T ss_dssp HHHHHHHHHHHTTCCSEEEEE----ETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEESSTT----HHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHcCCCEEEEe----CCCCChhHHHHHHHHHhhhhhhccCCCCeEEEEccch----hhHHHHHHCCCCEE
Confidence 4557888 8888898887762 33223 3666666652 1 1222333211 16788899999987
Q ss_pred HHHHhcCCH---------------HHHHHHHHHHHHcCCcEEEEeCC--------HHH----HHHHhccCCCeEEEeeCC
Q 018446 266 LLIAAVLPD---------------LDIRYMTKICKLLGLTALVEVHD--------ERE----MDRVLGIEGIELIGINNR 318 (355)
Q Consensus 266 LLIaaiL~~---------------~~L~~L~~~A~~LGLeaLVEVH~--------~eE----LerAl~l~ga~iIGINNR 318 (355)
-+..+ .++ +.+.+.+++|++.|+++-+-+-+ .+. ++++.++ |++.|.+-.-
T Consensus 114 ~i~~~-~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Ga~~i~l~DT 191 (337)
T 3ble_A 114 NLLTK-GSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKE-HIERIFLPDT 191 (337)
T ss_dssp EEEEE-CSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTS-CCSEEEEECT
T ss_pred EEEEe-cCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHc-CCCEEEEecC
Confidence 65443 333 46778899999999998877655 432 3444554 8998888653
Q ss_pred CCCccccChhhHHhhhccc
Q 018446 319 NLETFEVDNSNTKKLLEGE 337 (355)
Q Consensus 319 dL~TfevDl~~t~~L~~~~ 337 (355)
. =-..+..+.+|...+
T Consensus 192 ~---G~~~P~~v~~lv~~l 207 (337)
T 3ble_A 192 L---GVLSPEETFQGVDSL 207 (337)
T ss_dssp T---CCCCHHHHHHHHHHH
T ss_pred C---CCcCHHHHHHHHHHH
Confidence 1 113466666666543
No 447
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=59.43 E-value=30 Score=32.85 Aligned_cols=121 Identities=18% Similarity=0.255 Sum_probs=69.8
Q ss_pred CCCCHHHHHHHHHHcCceEEEEeccCCCCC-C-C----HHHHHHHHh----cCCCCCeecc-----------cccc-CH-
Q 018446 195 EDFDPVEIARSYEKGGAACLSILTDEKYFK-G-S----FENLEAVRS----AGVKCPLLCK-----------EFIV-DA- 251 (355)
Q Consensus 195 ~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~-G-S----~edL~~VR~----a~v~lPVLrK-----------DFII-dp- 251 (355)
+..++.+..+...+.|..+|-+- +.+++. + + .+++..+++ .++.+..++- +|.- |+
T Consensus 31 p~~~~~e~l~~aa~~G~~~vEl~-~~~~~p~~~~~~e~~~~~~~l~~~l~~~GL~i~~~~~~~~~~p~~~~g~l~~~d~~ 109 (387)
T 1bxb_A 31 ERLDPVYVVHKLAELGAYGVNLH-DEDLIPRGTPPQERDQIVRRFKKALDETGLKVPMVTANLFSDPAFKDGAFTSPDPW 109 (387)
T ss_dssp CCCCHHHHHHHHHHHTCSEEEEE-HHHHSCTTCCTTHHHHHHHHHHHHHHHHTCBCCEEECCCSSSGGGGGCSTTCSSHH
T ss_pred CCCCHHHHHHHHHHhCCCEEEec-CcccCCCCCChhhhHHHHHHHHHHHHHhCCEEEEEecCCCCCccccCCCCCCCCHH
Confidence 34577777777777788888764 222221 1 1 344444443 2334433321 1221 11
Q ss_pred ----------HHHHHHHHcCCcchHHHHhcC--------C--------HHHHHHHHHHHHHc--CCcEEEEeC-------
Q 018446 252 ----------WQIYYARTKGADAVLLIAAVL--------P--------DLDIRYMTKICKLL--GLTALVEVH------- 296 (355)
Q Consensus 252 ----------yQI~eAr~~GADAVLLIaaiL--------~--------~~~L~~L~~~A~~L--GLeaLVEVH------- 296 (355)
..|..|..+||..|.+-...- + -+.|.++.++|.+. |+...+|-|
T Consensus 110 ~r~~~i~~~~~~i~~A~~LGa~~vv~~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~a~~~g~gv~l~lE~~~~~~~~~ 189 (387)
T 1bxb_A 110 VRAYALRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREALNFMAAYAEDQGYGYRFALEPKPNEPRGD 189 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEECCTTCEESCGGGCGGGTHHHHHHHHHHHHHHHHHHHTCCCEEEECCCSSSSSSE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEECCCCCCccCCccCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCCCCC
Confidence 346678899999886533210 0 14577888899988 899999988
Q ss_pred ----CHHHHHHHhccCCCeE-EEee
Q 018446 297 ----DEREMDRVLGIEGIEL-IGIN 316 (355)
Q Consensus 297 ----~~eELerAl~l~ga~i-IGIN 316 (355)
|.+++.+.++.-+.+- +|++
T Consensus 190 ~~~~t~~~~~~ll~~v~~~~~vgl~ 214 (387)
T 1bxb_A 190 IYFATVGSMLAFIHTLDRPERFGLN 214 (387)
T ss_dssp ESSCSHHHHHHHHTTSSSGGGEEEC
T ss_pred ccCCCHHHHHHHHHHcCCccceEEE
Confidence 4567666665324444 6664
No 448
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=59.36 E-value=11 Score=35.75 Aligned_cols=95 Identities=14% Similarity=0.052 Sum_probs=60.6
Q ss_pred ceEEeEeeecCCCCCCCCCCCCHHH---HHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeecccccc-CH-
Q 018446 177 PALIAEVKKASPSRGILREDFDPVE---IARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIV-DA- 251 (355)
Q Consensus 177 ~aVIAEvKRaSPSkG~I~~~~Dp~~---iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFII-dp- 251 (355)
..+|+|. |-.+.+ ..|+.. .|+.-.+.||+-|-+- |.| +.++.+++. +.+||++-==+- +.
T Consensus 172 lpvIie~----~~G~~~--~~d~e~i~~aariA~elGAD~VKt~-----~t~--e~~~~vv~~-~~vPVv~~GG~~~~~~ 237 (295)
T 3glc_A 172 MPTMAVT----GVGKDM--VRDQRYFSLATRIAAEMGAQIIKTY-----YVE--KGFERIVAG-CPVPIVIAGGKKLPER 237 (295)
T ss_dssp CCEEEEE----CC------CCSHHHHHHHHHHHHHTTCSEEEEE-----CCT--TTHHHHHHT-CSSCEEEECCSCCCHH
T ss_pred CEEEEEC----CCCCcc--CCCHHHHHHHHHHHHHhCCCEEEeC-----CCH--HHHHHHHHh-CCCcEEEEECCCCCHH
Confidence 5688886 321222 245553 4566668899987764 333 457888874 789999743332 22
Q ss_pred ---HHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHH
Q 018446 252 ---WQIYYARTKGADAVLLIAAVLPDLDIRYMTKICK 285 (355)
Q Consensus 252 ---yQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~ 285 (355)
-++++|..+||+++...-+++..++-..+++...
T Consensus 238 ~~l~~v~~ai~aGA~Gv~vGRnI~q~~dp~~~~~al~ 274 (295)
T 3glc_A 238 EALEMCWQAIDQGASGVDMGRNIFQSDHPVAMMKAVQ 274 (295)
T ss_dssp HHHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCeEEEeHHHHhcCcCHHHHHHHHH
Confidence 3678888999999999988886555455544433
No 449
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=59.08 E-value=5.4 Score=38.79 Aligned_cols=46 Identities=24% Similarity=0.338 Sum_probs=37.4
Q ss_pred CHHHHHHHHHcCCcchHHHHhcCCH----------HHHHHHHHHHHHcCCcEEEEe
Q 018446 250 DAWQIYYARTKGADAVLLIAAVLPD----------LDIRYMTKICKLLGLTALVEV 295 (355)
Q Consensus 250 dpyQI~eAr~~GADAVLLIaaiL~~----------~~L~~L~~~A~~LGLeaLVEV 295 (355)
..+-+.+|+.+|||||-+.+-+=++ ++|.++.+.|+..||.-|+|+
T Consensus 112 ~~~sve~a~~~GADAVk~lv~~g~d~~~e~~~~q~~~l~rv~~ec~~~GiPlllEi 167 (332)
T 3iv3_A 112 VDWSIKRLKEAGADAVKFLLYYDVDGDPQVNVQKQAYIERIGSECQAEDIPFFLEI 167 (332)
T ss_dssp TTCCHHHHHHTTCSEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred cccCHHHHHHcCCCEEEEEEEcCCCchHHHHHHHHHHHHHHHHHHHHcCCceEEEE
Confidence 3366999999999999777666322 367788899999999999999
No 450
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=59.07 E-value=16 Score=36.08 Aligned_cols=129 Identities=19% Similarity=0.136 Sum_probs=86.1
Q ss_pred HHHHHHHHHHcCceEEEEec-----cCCCCCC-CHHH---HHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHH
Q 018446 199 PVEIARSYEKGGAACLSILT-----DEKYFKG-SFEN---LEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIA 269 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLT-----D~~fF~G-S~ed---L~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIa 269 (355)
..++|+...++||.++=.-| -+..|+| +.+. |.++++. ..+|+++- +.|+.|+..+..+ +|.+-+-+
T Consensus 158 a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~-~Gl~~~te--~~d~~~~~~l~~~-vd~lkIgs 233 (385)
T 3nvt_A 158 VAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDE-YGLGVISE--IVTPADIEVALDY-VDVIQIGA 233 (385)
T ss_dssp HHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHH-HTCEEEEE--CCSGGGHHHHTTT-CSEEEECG
T ss_pred HHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHH-cCCEEEEe--cCCHHHHHHHHhh-CCEEEECc
Confidence 34778888899999984433 2334666 3344 4445543 67999984 6689999888888 99877766
Q ss_pred hcCCHHHHHHHHHHHHHcCCcEEEEe---CCHHHHHHHhcc---CCC-eEEEee--CCCCCc---cccChhhHHhhh
Q 018446 270 AVLPDLDIRYMTKICKLLGLTALVEV---HDEREMDRVLGI---EGI-ELIGIN--NRNLET---FEVDNSNTKKLL 334 (355)
Q Consensus 270 aiL~~~~L~~L~~~A~~LGLeaLVEV---H~~eELerAl~l---~ga-~iIGIN--NRdL~T---fevDl~~t~~L~ 334 (355)
.-+.. ..|++.+.++|.-+++.- .|.+|+..|++. .|. +++-.- ++...| ..+|+..-..|.
T Consensus 234 ~~~~n---~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk 307 (385)
T 3nvt_A 234 RNMQN---FELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILK 307 (385)
T ss_dssp GGTTC---HHHHHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHH
T ss_pred ccccC---HHHHHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHH
Confidence 66665 367888999999999998 788999887642 244 343222 233433 346766544443
No 451
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=58.94 E-value=5.2 Score=37.50 Aligned_cols=88 Identities=11% Similarity=0.142 Sum_probs=55.3
Q ss_pred HHHHHHHhcCCCCCeecc---cccc-CH-HHHHHHHHcCCcchHHHHhc----CC-HHHHHHHHHHHHHcCCcEEEE--e
Q 018446 228 ENLEAVRSAGVKCPLLCK---EFIV-DA-WQIYYARTKGADAVLLIAAV----LP-DLDIRYMTKICKLLGLTALVE--V 295 (355)
Q Consensus 228 edL~~VR~a~v~lPVLrK---DFII-dp-yQI~eAr~~GADAVLLIaai----L~-~~~L~~L~~~A~~LGLeaLVE--V 295 (355)
+.+..+|++ ++.||..| .+-. +. .-+..+..+|+|+|.+-..- ++ ...+ +++...++ ++..+.- |
T Consensus 116 eiv~~v~~~-~~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~-~~i~~i~~-~ipVi~~GgI 192 (318)
T 1vhn_A 116 YIVRELRKS-VSGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEW-KALSVLEK-RIPTFVSGDI 192 (318)
T ss_dssp HHHHHHHHH-CSSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEESSCTTTTTSSCCCG-GGGGGSCC-SSCEEEESSC
T ss_pred HHHHHHHHh-hCCCEEEEecCCCChHHHHHHHHHHHHhCCCEEEEcCCCccccCCCCcCH-HHHHHHHc-CCeEEEECCc
Confidence 567788886 78999998 4433 23 33445567899998764321 11 1122 22222233 6665554 7
Q ss_pred CCHHHHHHHhccCCCeEEEeeCC
Q 018446 296 HDEREMDRVLGIEGIELIGINNR 318 (355)
Q Consensus 296 H~~eELerAl~l~ga~iIGINNR 318 (355)
.|.+++++++...|++.|+|---
T Consensus 193 ~s~~da~~~l~~~gad~V~iGR~ 215 (318)
T 1vhn_A 193 FTPEDAKRALEESGCDGLLVARG 215 (318)
T ss_dssp CSHHHHHHHHHHHCCSEEEESGG
T ss_pred CCHHHHHHHHHcCCCCEEEECHH
Confidence 89999999998228999998654
No 452
>2vd8_A Alanine racemase; pyridoxal 5'-phosphate, peptidoglycan synthesis, PLP, OPPF, L-alanine, isomerase, D- alanine, pyridoxal phosphate; HET: MLY LLP; 1.47A {Bacillus anthracis} PDB: 2vd9_A* 3ha1_A*
Probab=58.90 E-value=38 Score=32.31 Aligned_cols=104 Identities=19% Similarity=0.186 Sum_probs=72.0
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHH
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDI 277 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L 277 (355)
...++++.+.+.|+..+.|. +.+.+..+|+++++-|+|.== ...+-++.++..+| ++..+=+.+++
T Consensus 50 g~~~v~~~l~~~G~~~f~va--------s~~Ea~~lr~~G~~~~il~~g-~~~~~~~~~~~~~~-----i~~~vds~~~l 115 (391)
T 2vd8_A 50 DYVPVAXIALEAGATRLAVA--------FLDEALVLRRAGITAPILVLG-PSPPRDINVAAEND-----VALTVFQXEWV 115 (391)
T ss_dssp CHHHHHHHHHHTTCCEEEES--------SHHHHHHHHHTTCCSCEEECS-CCCGGGHHHHHHTT-----EEEECCCHHHH
T ss_pred ChHHHHHHHHHcCCCeEEee--------cHHHHHHHHhcCCCCceEEec-CCChHHHHHHHHCC-----eEEEEcCHHHH
Confidence 34689999989999887664 577888888877777787532 25666777777654 23466677788
Q ss_pred HHHHHHHHHcC--CcEEEEeCC---------HHHHHHHh----ccCCCeEEEee
Q 018446 278 RYMTKICKLLG--LTALVEVHD---------EREMDRVL----GIEGIELIGIN 316 (355)
Q Consensus 278 ~~L~~~A~~LG--LeaLVEVH~---------~eELerAl----~l~ga~iIGIN 316 (355)
+.|.+ |.+.| +.++++|.+ .+|+..++ .+++.++.||-
T Consensus 116 ~~l~~-a~~~~~~~~V~lkvdtGm~R~G~~~~~e~~~~~~~i~~~~~l~l~Gl~ 168 (391)
T 2vd8_A 116 DEAIX-LWDGSSTMXYHINFDSGMGRIGIRERXELXGFLXSLEGAPFLELEGVY 168 (391)
T ss_dssp HHHHH-HCCSSCCEEEEEEBCSSCCSSSBCCHHHHHHHHHHHTTCTTEEEEEEE
T ss_pred HHHHH-HHhcCCceEEEEEEeCCCCCCCCCchhhHHHHHHHHhhcCCceEEEee
Confidence 88888 87666 457888764 35654432 33477889983
No 453
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=58.51 E-value=1.4 Score=39.07 Aligned_cols=79 Identities=11% Similarity=0.046 Sum_probs=53.3
Q ss_pred CHHHHHHHHHHcCceEEEE-eccCCCCCC---CHHHHHHHHhcC-CCCCeeccccccCHHHHHHHHHcCCcchHHHHhcC
Q 018446 198 DPVEIARSYEKGGAACLSI-LTDEKYFKG---SFENLEAVRSAG-VKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISV-LTD~~fF~G---S~edL~~VR~a~-v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL 272 (355)
.+. -++.+.+.|++-+.+ .+-...|.| +.+.+..+|+.. .++| ++=|+.|.+-++.++..+|||+|...-++.
T Consensus 121 T~~-~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~~l~~i~~~~~~~~p-i~v~GGI~~~~~~~~~~aGAd~vvvGsaI~ 198 (218)
T 3jr2_A 121 TMQ-DAKAWVDLGITQAIYHRSRDAELAGIGWTTDDLDKMRQLSALGIE-LSITGGIVPEDIYLFEGIKTKTFIAGRALA 198 (218)
T ss_dssp CHH-HHHHHHHTTCCEEEEECCHHHHHHTCCSCHHHHHHHHHHHHTTCE-EEEESSCCGGGGGGGTTSCEEEEEESGGGS
T ss_pred CHH-HHHHHHHcCccceeeeeccccccCCCcCCHHHHHHHHHHhCCCCC-EEEECCCCHHHHHHHHHcCCCEEEEchhhc
Confidence 353 445556669986544 332122333 567778787641 2555 456999999999999999999999998888
Q ss_pred CHHHHH
Q 018446 273 PDLDIR 278 (355)
Q Consensus 273 ~~~~L~ 278 (355)
..++..
T Consensus 199 ~a~dp~ 204 (218)
T 3jr2_A 199 GAEGQQ 204 (218)
T ss_dssp HHHHHH
T ss_pred CCCCHH
Confidence 654443
No 454
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=58.41 E-value=21 Score=37.15 Aligned_cols=78 Identities=18% Similarity=0.125 Sum_probs=58.6
Q ss_pred CHHHHHHHHHHcCceEEEEec----------cCCCCCC---CHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-Cc
Q 018446 198 DPVEIARSYEKGGAACLSILT----------DEKYFKG---SFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-AD 263 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLT----------D~~fF~G---S~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-AD 263 (355)
|..++|+..++ |+++|.|-. -+..|.+ ..+....+|++ +++||+.--=|-++.+..++...| ||
T Consensus 239 ~~~~~~~~l~~-~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~pvi~~G~i~~~~~a~~~l~~g~aD 316 (729)
T 1o94_A 239 DGQKFVEMADS-LVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQV-SKKPVLGVGRYTDPEKMIEIVTKGYAD 316 (729)
T ss_dssp HHHHHHHHHGG-GCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTT-CSSCEECCSCCCCHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHh-hcCEEEEeeecccccccccCCccccCccccHHHHHHHHHH-CCCEEEEeCCCCCHHHHHHHHHCCCCC
Confidence 67889999987 688766532 1222322 36777889986 899999998888999999999998 99
Q ss_pred chHHHHhcCCHHHH
Q 018446 264 AVLLIAAVLPDLDI 277 (355)
Q Consensus 264 AVLLIaaiL~~~~L 277 (355)
+|-+==++|.+-++
T Consensus 317 ~V~~gR~~l~~P~~ 330 (729)
T 1o94_A 317 IIGCARPSIADPFL 330 (729)
T ss_dssp BEEESHHHHHCTTH
T ss_pred EEEeCchhhcCchH
Confidence 99876666655444
No 455
>3n2b_A Diaminopimelate decarboxylase; LYSA, lyase, structural genom center for structural genomics of infectious diseases, CSGI; 1.80A {Vibrio cholerae}
Probab=58.19 E-value=1.2e+02 Score=29.74 Aligned_cols=84 Identities=15% Similarity=0.156 Sum_probs=62.2
Q ss_pred HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCC-eeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHH
Q 018446 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCP-LLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIR 278 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lP-VLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~ 278 (355)
..+++...+.|+ .+-| .|...+..+|+++++.+ |+.--...++-+|..|..+|.. +..+=+.++|+
T Consensus 90 ~~v~~~l~~~G~-g~dv--------aS~~E~~~~~~~G~~~~~I~~~g~~k~~~ei~~a~~~gv~----~~~vds~~el~ 156 (441)
T 3n2b_A 90 LGVLNTLARLGS-GFDI--------VSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIK----CFNVESEPELQ 156 (441)
T ss_dssp HHHHHHHHHTTC-EEEE--------SSHHHHHHHHHTTCCGGGEEECCTTCCHHHHHHHHHTTCS----EEEECSHHHHH
T ss_pred HHHHHHHHHcCC-cEEE--------eCHHHHHHHHHcCCCcccEEEcCCCCCHHHHHHHHHCCCC----EEEEcCHHHHH
Confidence 468899988887 5444 77888999998877655 5555556678899999988753 12455678899
Q ss_pred HHHHHHHHcC--CcEEEEeC
Q 018446 279 YMTKICKLLG--LTALVEVH 296 (355)
Q Consensus 279 ~L~~~A~~LG--LeaLVEVH 296 (355)
.+.+.|.++| ..+++.|.
T Consensus 157 ~l~~~a~~~~~~~~V~lRvn 176 (441)
T 3n2b_A 157 RLNKVAGELGVKAPISLRIN 176 (441)
T ss_dssp HHHHHHHHHTCCEEEEEEBC
T ss_pred HHHHHHHhcCCCcEEEEEec
Confidence 9999998877 45677774
No 456
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=58.08 E-value=14 Score=35.97 Aligned_cols=92 Identities=13% Similarity=0.118 Sum_probs=70.3
Q ss_pred HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhcC-CHHHH
Q 018446 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAVL-PDLDI 277 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaaiL-~~~~L 277 (355)
..+++.+++.|..-| |+..-..+++.++.+|+. +++||..-+.+.+.+++.+....| +|.|.+=+.-. +-.+.
T Consensus 238 ~~~~~~l~~~~i~~i----EeP~~~~d~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGite~ 312 (421)
T 4hnl_A 238 IQFAKAAEPYQLFFL----EDILPPDQSHWLTQLRSQ-SATPIATGELFNNPMEWQELVKNRQIDFMRAHVSQIGGITPA 312 (421)
T ss_dssp HHHHHHHGGGCCSEE----ECCSCGGGGGGHHHHHTT-CCCCEEECTTCCSGGGTHHHHHTTCCSEECCCGGGGTSHHHH
T ss_pred HHHHHHhhhhhhccc----ccCCcccchHHHHHHHhc-CCCCeecCcceehhHHHHHHHhcCCceEEEeCCCCCCCHHHH
Confidence 457777877775432 555566788999999985 899999999999999999988887 57776633333 55677
Q ss_pred HHHHHHHHHcCCcEEEEeCCH
Q 018446 278 RYMTKICKLLGLTALVEVHDE 298 (355)
Q Consensus 278 ~~L~~~A~~LGLeaLVEVH~~ 298 (355)
..+.++|+..|+.+. +|+.
T Consensus 313 ~~ia~~A~~~gi~v~--~h~~ 331 (421)
T 4hnl_A 313 LKLAHFCDAMGVRIA--WHTP 331 (421)
T ss_dssp HHHHHHHHHTTCEEC--CCCC
T ss_pred HHHHHHHHHCCCeEE--EeCC
Confidence 889999999999865 4543
No 457
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=58.01 E-value=24 Score=35.65 Aligned_cols=95 Identities=8% Similarity=0.149 Sum_probs=70.9
Q ss_pred CCHHHHHHHHHH----cCceEEEEeccCCCCCCCHHHHHHHHhcCC-CCCeecccc-ccCHHHHHHHHHcC-CcchHHHH
Q 018446 197 FDPVEIARSYEK----GGAACLSILTDEKYFKGSFENLEAVRSAGV-KCPLLCKEF-IVDAWQIYYARTKG-ADAVLLIA 269 (355)
Q Consensus 197 ~Dp~~iA~~Ye~----~GAaaISVLTD~~fF~GS~edL~~VR~a~v-~lPVLrKDF-IIdpyQI~eAr~~G-ADAVLLIa 269 (355)
+++.+++.-|.+ .+ |--+ |..+-..+++.+..+++. . .+||.-.|. +-.++.+..+...| +|+|++=+
T Consensus 279 ~t~~elid~y~~lle~yp---I~~I-EDPl~~dD~eg~a~Lt~~-lg~i~IvGDEl~vTn~~~i~~~Ie~~a~n~IlIKv 353 (441)
T 3qtp_A 279 KDVDGLIAEYVDYGKHYP---IASI-EDPFAEDDWAAWNKFTVE-HGNFQIVGDDLLVTNPARVQMAMDKNACNSVLIKV 353 (441)
T ss_dssp ECHHHHHHHHHHHHHHSC---EEEE-ESCSCTTCHHHHHHHHHH-TTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECG
T ss_pred cCHHHHHHHHHHHhhhcc---eeee-cCCCChHHHHHHHHHHHh-cCCceEEeccccccCHHHHHHHHHcCCCCEEEecc
Confidence 577888777665 34 3333 455788999999999986 6 499999995 56799999987766 57777744
Q ss_pred hcC-CHHHHHHHHHHHHHcCCcEEEEeC
Q 018446 270 AVL-PDLDIRYMTKICKLLGLTALVEVH 296 (355)
Q Consensus 270 aiL-~~~~L~~L~~~A~~LGLeaLVEVH 296 (355)
.-. +--+..+..++|+..|+.+.|--.
T Consensus 354 nqiGGITEalkaa~lA~~~G~~vmvsHr 381 (441)
T 3qtp_A 354 NQIGTLTETFKTIKMAQEKGWGVMASHR 381 (441)
T ss_dssp GGTCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred cccccHHHHHHHHHHHHHcCCeEEEeCC
Confidence 433 345677888999999999998543
No 458
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=56.97 E-value=15 Score=33.81 Aligned_cols=67 Identities=22% Similarity=0.273 Sum_probs=53.2
Q ss_pred cCHHHHHHHHHcCCcchHHHH--hcCCHHHHHHHHHHHHHcCCcEEEEeC--CHHHHHHHhccCCCeEEEee
Q 018446 249 VDAWQIYYARTKGADAVLLIA--AVLPDLDIRYMTKICKLLGLTALVEVH--DEREMDRVLGIEGIELIGIN 316 (355)
Q Consensus 249 IdpyQI~eAr~~GADAVLLIa--aiL~~~~L~~L~~~A~~LGLeaLVEVH--~~eELerAl~l~ga~iIGIN 316 (355)
-+|.-+..|...|+|+|+|=. ++.+.+.+..++..+...|.+++|=|. +..+++++++. |++-|.+-
T Consensus 25 ~~p~~~e~a~~~g~D~vilDlEhav~~~~k~~~~l~a~~~~~~~~~VRVn~~~~~di~~~ld~-G~~gI~lP 95 (261)
T 3qz6_A 25 YNPDIVRIYAEAGLDYFIVDCEHAAYTFREINHLVSVAKNAGVSVLVRIPQVDRAHVQRLLDI-GAEGFMIP 95 (261)
T ss_dssp CCTTHHHHHHHTTCSEEEEESSSSCCCHHHHHHHHHHHHHHTCEEEEECSSCCHHHHHHHHHH-TCCEEEET
T ss_pred CCHHHHHHHhcCCcCEEEEeccCCCCCHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHhc-CCCEEEEC
Confidence 467788889999999988733 556677788888888888999999885 46789999986 88877664
No 459
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=56.81 E-value=45 Score=31.73 Aligned_cols=120 Identities=18% Similarity=0.234 Sum_probs=69.5
Q ss_pred CCCCHHHHHHHHHHcCceEEEEeccCCCCC-C-C----HHHHHHHHh----cCCCCCeeccc-----------ccc-CH-
Q 018446 195 EDFDPVEIARSYEKGGAACLSILTDEKYFK-G-S----FENLEAVRS----AGVKCPLLCKE-----------FIV-DA- 251 (355)
Q Consensus 195 ~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~-G-S----~edL~~VR~----a~v~lPVLrKD-----------FII-dp- 251 (355)
+..++.+..+...+.|..+|-+- +..++. + + .+++..+|+ .++.+..++-. |.- |+
T Consensus 31 ~~~~~~e~l~~aa~~G~~~VEl~-~~~l~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~~~~~~f~~p~~~~g~l~spd~~ 109 (393)
T 1xim_A 31 TALDPVEAVHKLAEIGAYGITFH-DDDLVPFGSDAQTRDGIIAGFKKALDETGLIVPMVTTNLFTHPVFKDGGFTSNDRS 109 (393)
T ss_dssp CCCCHHHHHHHHHHHTCSEEECB-HHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCCEEECCCSSSGGGTTCSTTCSSHH
T ss_pred CCCCHHHHHHHHHHhCCCEEEee-cccCCCccccccccHHHHHHHHHHHHHhCCEEEEEecCCcCCcccccCCCCCCCHH
Confidence 45677777777788888888764 211111 2 2 345555443 23444433322 211 11
Q ss_pred ----------HHHHHHHHcCCcchHHHHhc--------CC--------HHHHHHHHHHHHHc--CCcEEEEeCC------
Q 018446 252 ----------WQIYYARTKGADAVLLIAAV--------LP--------DLDIRYMTKICKLL--GLTALVEVHD------ 297 (355)
Q Consensus 252 ----------yQI~eAr~~GADAVLLIaai--------L~--------~~~L~~L~~~A~~L--GLeaLVEVH~------ 297 (355)
..|..|..+||..|.+.... .+ -+.|.++.++|.+. |+...+|-|.
T Consensus 110 ~r~~~i~~~~~~i~~A~~LGa~~vv~~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~A~~~g~gv~l~lE~~~~~~~~~ 189 (393)
T 1xim_A 110 VRRYAIRKVLRQMDLGAELGAKTLVLWGGREGAEYDSAKDVSAALDRYREALNLLAQYSEDRGYGLRFAIEPKPNEPRGD 189 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEEECTTSEESSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCSSSSSSE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEECCCCCCCcCCccCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEecCCCCCCCC
Confidence 34666889999988653321 11 13577788889988 9999999984
Q ss_pred -----HHHHHHHhccCCCeE-EEe
Q 018446 298 -----EREMDRVLGIEGIEL-IGI 315 (355)
Q Consensus 298 -----~eELerAl~l~ga~i-IGI 315 (355)
.+++...++.-+.+- +|+
T Consensus 190 ~~~~t~~~~~~ll~~v~~~~~vgl 213 (393)
T 1xim_A 190 ILLPTAGHAIAFVQELERPELFGI 213 (393)
T ss_dssp ESSCSHHHHHHHHTTSSSGGGEEE
T ss_pred CcCCCHHHHHHHHHHhCCccceEE
Confidence 455666554323333 555
No 460
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=56.80 E-value=17 Score=34.38 Aligned_cols=62 Identities=24% Similarity=0.290 Sum_probs=44.1
Q ss_pred CCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCc-eEEEEeccCCCCCCCH----HHHHHHHhcCCCCCeeccc
Q 018446 175 GLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGA-ACLSILTDEKYFKGSF----ENLEAVRSAGVKCPLLCKE 246 (355)
Q Consensus 175 g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GA-aaISVLTD~~fF~GS~----edL~~VR~a~v~lPVLrKD 246 (355)
++..||+=+-- .| ..+..++++..++.|| +++.|++ |-||.-+. ++++.|.++ +++||+-=+
T Consensus 75 grvpViaGvg~--~~------t~~ai~la~~A~~~Ga~davlv~~-P~y~~~s~~~l~~~f~~va~a-~~lPiilYn 141 (311)
T 3h5d_A 75 GRVPLIAGVGT--ND------TRDSIEFVKEVAEFGGFAAGLAIV-PYYNKPSQEGMYQHFKAIADA-SDLPIIIYN 141 (311)
T ss_dssp SSSCEEEECCC--SS------HHHHHHHHHHHHHSCCCSEEEEEC-CCSSCCCHHHHHHHHHHHHHS-CSSCEEEEE
T ss_pred CCCcEEEeCCC--cC------HHHHHHHHHHHHhcCCCcEEEEcC-CCCCCCCHHHHHHHHHHHHHh-CCCCEEEEe
Confidence 55678887621 11 2367789999999887 9999987 56777664 456677775 788877544
No 461
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=56.70 E-value=9.8 Score=37.83 Aligned_cols=45 Identities=20% Similarity=0.068 Sum_probs=36.5
Q ss_pred HHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcC
Q 018446 227 FENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVL 272 (355)
Q Consensus 227 ~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL 272 (355)
+..+..++.. +++||+.--=|.++..|..|.++|||+|.+=-.+|
T Consensus 317 l~~~~~~~~~-~~vpVia~GGi~~~~di~kalalGA~~v~~g~~~~ 361 (486)
T 2cu0_A 317 VAMVADRAQE-YGLYVIADGGIRYSGDIVKAIAAGADAVMLGNLLA 361 (486)
T ss_dssp HHHHHHHHHH-HTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTT
T ss_pred HHHHHHHHHH-cCCcEEecCCCCCHHHHHHHHHcCCCceeeChhhh
Confidence 4445555553 57999999999999999999999999998766665
No 462
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=56.26 E-value=27 Score=35.69 Aligned_cols=116 Identities=14% Similarity=0.199 Sum_probs=67.5
Q ss_pred HHHHHHHHHcCceEEEEec----------------cCCCCCCCHHH--------HHHHHhcCC--CCCeecc----cc--
Q 018446 200 VEIARSYEKGGAACLSILT----------------DEKYFKGSFEN--------LEAVRSAGV--KCPLLCK----EF-- 247 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLT----------------D~~fF~GS~ed--------L~~VR~a~v--~lPVLrK----DF-- 247 (355)
.+-|+...++|+++|=+.- -..-|+||+++ +.+||++ + +.||..| |+
T Consensus 144 ~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~-vG~~~~v~vrls~~~~~~ 222 (671)
T 1ps9_A 144 ARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRER-VGNDFIIIYRLSMLDLVE 222 (671)
T ss_dssp HHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH-HCSSSEEEEEEEEECCST
T ss_pred HHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHH-cCCCceEEEEECccccCC
Confidence 3456666788999998842 22347999754 5566765 4 7787432 33
Q ss_pred -ccCH---HHH-HHHHHcCCcchHHHHhcC-----------CH-HHHHHHHHHHHHcCCcEEE--EeCCHHHHHHHhccC
Q 018446 248 -IVDA---WQI-YYARTKGADAVLLIAAVL-----------PD-LDIRYMTKICKLLGLTALV--EVHDEREMDRVLGIE 308 (355)
Q Consensus 248 -IIdp---yQI-~eAr~~GADAVLLIaaiL-----------~~-~~L~~L~~~A~~LGLeaLV--EVH~~eELerAl~l~ 308 (355)
..+. .++ .....+|+|.|-+..... +. ..+..+..+.+..++-.+. -++|.+++++++...
T Consensus 223 ~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~~a~~~l~~g 302 (671)
T 1ps9_A 223 DGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDILSRG 302 (671)
T ss_dssp TCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEECSSCCSHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEEeCCCCCHHHHHHHHHcC
Confidence 2222 232 334467999985532111 11 1123333344445654443 357899999999863
Q ss_pred CCeEEEee
Q 018446 309 GIELIGIN 316 (355)
Q Consensus 309 ga~iIGIN 316 (355)
++++|++-
T Consensus 303 ~aD~V~~g 310 (671)
T 1ps9_A 303 DADMVSMA 310 (671)
T ss_dssp SCSEEEES
T ss_pred CCCEEEeC
Confidence 39999873
No 463
>2nva_A Arginine decarboxylase, A207R protein; PLP, TIM barrel, eukaryotic ODC- like, lyase; HET: PL2; 1.80A {Paramecium bursaria chlorella virus 1} PDB: 2nv9_A*
Probab=56.13 E-value=94 Score=29.11 Aligned_cols=82 Identities=10% Similarity=0.175 Sum_probs=61.2
Q ss_pred HHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCC-CeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHH
Q 018446 201 EIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKC-PLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRY 279 (355)
Q Consensus 201 ~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~l-PVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~ 279 (355)
.+++...+.|+ .+.| .|.+.+..+|+++++. +|+.--...++-++.+|..+|.+. ..+=+.++|+.
T Consensus 54 ~v~~~l~~~G~-g~~v--------as~~E~~~~~~~G~~~~~I~~~~~~k~~~~l~~a~~~~v~~----~~vds~~~l~~ 120 (372)
T 2nva_A 54 VLLKTMCDKNV-NFDC--------ASSSEIKKVIQIGVSPSRIIFAHTMKTIDDLIFAKDQGVDI----ATFDSSFELDK 120 (372)
T ss_dssp HHHHHHHHTTC-EEEE--------CSHHHHHHHHHHTCCGGGEEECCSCCCHHHHHHHHHHTCCE----EEECSHHHHHH
T ss_pred HHHHHHHHcCC-cEEE--------cCHHHHHHHHHcCCCHHHEEECCCCCCHHHHHHHHHCCCCE----EEeCCHHHHHH
Confidence 68899999998 7665 5688899999887765 477666667888999998888652 24556677887
Q ss_pred HHHHHHHcCCcEEEEeCC
Q 018446 280 MTKICKLLGLTALVEVHD 297 (355)
Q Consensus 280 L~~~A~~LGLeaLVEVH~ 297 (355)
+.+.+. ...+++.||.
T Consensus 121 l~~~~~--~~~v~lrv~~ 136 (372)
T 2nva_A 121 IHTYHP--NCKMILRIRC 136 (372)
T ss_dssp HHHHCT--TCEEEEEBCC
T ss_pred HHHhCC--CCeEEEEEec
Confidence 776654 3677888876
No 464
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=55.83 E-value=30 Score=27.21 Aligned_cols=80 Identities=14% Similarity=0.200 Sum_probs=62.7
Q ss_pred HHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhcc
Q 018446 228 ENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGI 307 (355)
Q Consensus 228 edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l 307 (355)
+.|..+++++ .++.-.-|+..|...|--.++++|.=-++...+.+..+|...|.. ++.+.|.+||-+|+..
T Consensus 8 ~~L~la~kag--------k~v~G~~~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip-~~~~~s~~eLG~a~Gk 78 (101)
T 3on1_A 8 SLLGLAARAR--------QLLTGEEQVVKAVQNGQVTLVILSSDAGIHTKKKLLDKCGSYQIP-VKVVGNRQMLGRAIGK 78 (101)
T ss_dssp HHHHHHHHTT--------CEEESHHHHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHHTCC-EEEESCHHHHHHHTTS
T ss_pred HHHHHHHHHC--------CEeECHHHHHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHHcCCC-EEEeCCHHHHHHHhCC
Confidence 4455566542 245556689999999988888888888888888888999999976 5579999999999987
Q ss_pred CCCeEEEee
Q 018446 308 EGIELIGIN 316 (355)
Q Consensus 308 ~ga~iIGIN 316 (355)
....+++|-
T Consensus 79 ~~~~~vai~ 87 (101)
T 3on1_A 79 HERVVIGVK 87 (101)
T ss_dssp SCCSEEEEC
T ss_pred cCeEEEEEE
Confidence 556788884
No 465
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=55.72 E-value=26 Score=33.44 Aligned_cols=97 Identities=10% Similarity=0.112 Sum_probs=68.6
Q ss_pred CCCHH---HHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHHHHhc
Q 018446 196 DFDPV---EIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLLIAAV 271 (355)
Q Consensus 196 ~~Dp~---~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLLIaai 271 (355)
.+++. .+++.....+ --|..+-|| +-..+++.+..+|+. +.+||..-+-+.+.+++.+....| +|.|.+=..-
T Consensus 197 ~~~~~~A~~~~~~L~~~~-~~i~~iEeP-~~~~d~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~ 273 (365)
T 3ik4_A 197 GYDVERALAFCAACKAES-IPMVLFEQP-LPREDWAGMAQVTAQ-SGFAVAADESARSAHDVLRIAREGTASVINIKLMK 273 (365)
T ss_dssp CCCHHHHHHHHHHHHHTT-CCEEEEECC-SCTTCHHHHHHHHHH-SSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHH
T ss_pred CCCHHHHHHHHHHHhhCC-CCceEEECC-CCcccHHHHHHHHhh-CCCCEEECCCCCCHHHHHHHHHhCCCCEEEEcCCc
Confidence 44554 4556662212 124445554 566889999999986 899999999999999999887665 6777663333
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEe
Q 018446 272 LPDLDIRYMTKICKLLGLTALVEV 295 (355)
Q Consensus 272 L~~~~L~~L~~~A~~LGLeaLVEV 295 (355)
=+-.+...+.++|+..|+.+.+-.
T Consensus 274 GGit~~~~i~~~A~~~gi~~~~~~ 297 (365)
T 3ik4_A 274 AGVAEGLKMIAIAQAAGLGLMIGG 297 (365)
T ss_dssp HCHHHHHHHHHHHHHHTCEEEECC
T ss_pred cCHHHHHHHHHHHHHcCCeEEecC
Confidence 334567788999999999987644
No 466
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=55.51 E-value=18 Score=33.67 Aligned_cols=128 Identities=14% Similarity=0.086 Sum_probs=77.7
Q ss_pred CceEEeEeeecCCCCCCCCCCCC----HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCe--ecccccc
Q 018446 176 LPALIAEVKKASPSRGILREDFD----PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPL--LCKEFIV 249 (355)
Q Consensus 176 ~~aVIAEvKRaSPSkG~I~~~~D----p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPV--LrKDFII 249 (355)
...+..|+|-.....+. ..+ ...+++...+.|..-=.++ ..-+.+.|..+|+...++|+ |..+..-
T Consensus 143 ~~~l~IEiK~~~~~~~~---~~~~~~~~~~v~~~l~~~~~~~~v~i-----~SF~~~~l~~~~~~~p~~~~~~l~~~~~~ 214 (313)
T 3l12_A 143 APYLLLELKSDPALMHD---HAARAEMVAAVLADVRRYRMEPRTVM-----HSFDWALLGECRRQAPDLPTSYLSQLPEN 214 (313)
T ss_dssp CCEEEEEECCCGGGTTC---HHHHHHHHHHHHHHHHHTTCGGGEEE-----EESCHHHHHHHHHHCTTSCEEEEECCCC-
T ss_pred CceEEEEEccCCccccc---cccHHHHHHHHHHHHHHcCCCCCEEE-----EcCCHHHHHHHHHHCCCCcEEEEeccccc
Confidence 46899999965322110 011 2245555666564211111 12357888888875455553 3332210
Q ss_pred -------CHH------------HHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEE-EeCCHHHHHHHhccCC
Q 018446 250 -------DAW------------QIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALV-EVHDEREMDRVLGIEG 309 (355)
Q Consensus 250 -------dpy------------QI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLV-EVH~~eELerAl~l~g 309 (355)
.+| -...++..||+++-.-...+++ ++++.|++.|+.+.+ -|.+++++++.+++ |
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~~Gl~V~~WTVn~~~~~~~l~~~-G 289 (313)
T 3l12_A 215 ADDPGEDSAKPVGPDYDRMTESLPQAVASAGGQLWCPYFLDVTP----ELVAEAHDLGLIVLTWTVNEPEDIRRMATT-G 289 (313)
T ss_dssp ------------CCCTTTCCSCHHHHHHHHTCSEEEEBGGGCCH----HHHHHHHHTTCEEEEBCCCSHHHHHHHHHH-T
T ss_pred cccccccccccccccchhccccHHHHHHHhCCcEEecchhcCCH----HHHHHHHHCCCEEEEEcCCCHHHHHHHHHc-C
Confidence 001 0234567789888776666764 688999999999887 47889999999997 8
Q ss_pred CeEEEee
Q 018446 310 IELIGIN 316 (355)
Q Consensus 310 a~iIGIN 316 (355)
++-|--|
T Consensus 290 VDgIiTD 296 (313)
T 3l12_A 290 VDGIVTD 296 (313)
T ss_dssp CSEEEES
T ss_pred CCEEEeC
Confidence 8877544
No 467
>3o21_A Glutamate receptor 3; periplasmatic binding protein, oligomerization, membrane, TR protein; HET: NAG; 2.20A {Rattus norvegicus} PDB: 3p3w_A
Probab=55.31 E-value=23 Score=33.04 Aligned_cols=89 Identities=10% Similarity=-0.048 Sum_probs=61.4
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeecccccc--C----HHHHHHHHHcCCcchHHHHhcC
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIV--D----AWQIYYARTKGADAVLLIAAVL 272 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFII--d----pyQI~eAr~~GADAVLLIaaiL 272 (355)
...+++.....|..=++|+.|..|..+.++.+.+.-+. ..+.|....++- + .-|+.+.+..++|+|++..
T Consensus 118 ~~a~~~~~~~~gw~~vaii~d~~~g~~~~~~~~~~~~~-~g~~v~~~~~~~~~~~~d~~~~l~~ik~~~~~vii~~~--- 193 (389)
T 3o21_A 118 KGAILSLLSYYKWEKFVYLYDTERGFSVLQAIMEAAVQ-NNWQVTARSVGNIKDVQEFRRIIEEMDRRQEKRYLIDC--- 193 (389)
T ss_dssp HHHHHHHHHHHTCCEEEEEECSTTCSHHHHHHHHHHHH-TTCEEEEEECTTCCCTHHHHHHHHHHHTTTCCEEEEES---
T ss_pred HHHHHHHHHhCCCCEEEEEEcCcHHHHHHHHHHHHhhc-CCCeEEEEEecCCCCcHHHHHHHHHHHhCCCeEEEEEC---
Confidence 44566655667999999999888877777777654332 244444444331 1 2367778888999987743
Q ss_pred CHHHHHHHHHHHHHcCCcE
Q 018446 273 PDLDIRYMTKICKLLGLTA 291 (355)
Q Consensus 273 ~~~~L~~L~~~A~~LGLea 291 (355)
..++...+++.++++||..
T Consensus 194 ~~~~~~~i~~qa~~~g~~~ 212 (389)
T 3o21_A 194 EVERINTILEQVVILGKHS 212 (389)
T ss_dssp CHHHHHHHHHHHHHHCSCS
T ss_pred CHHHHHHHHHHHHHcCccc
Confidence 4567888999999999973
No 468
>3vab_A Diaminopimelate decarboxylase 1; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: LLP; 2.10A {Brucella melitensis BV}
Probab=55.29 E-value=1.2e+02 Score=29.69 Aligned_cols=84 Identities=12% Similarity=0.124 Sum_probs=62.4
Q ss_pred HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCC-eeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHH
Q 018446 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCP-LLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIR 278 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lP-VLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~ 278 (355)
..+++...+.|+ ++-| .|...+..+|+++++.+ |+.-=...++-.|..|..+|.. +..+=+.++|+
T Consensus 87 ~~v~~~l~~~G~-g~dv--------aS~~E~~~~~~~G~~~~~I~~~g~~k~~~ei~~a~~~gv~----~~~vds~~el~ 153 (443)
T 3vab_A 87 QAVLTALAKLGA-GADT--------VSQGEIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIY----CFNVESEPELE 153 (443)
T ss_dssp HHHHHHHHHTTC-EEEE--------SSHHHHHHHHHTTCCGGGEEEECTTCCHHHHHHHHHHTCS----EEEECCHHHHH
T ss_pred HHHHHHHHHcCC-cEEE--------eCHHHHHHHHHcCCChhhEEEcCCCCCHHHHHHHHHCCCC----EEEECCHHHHH
Confidence 368888888886 5433 67888999998776654 5555555678899999988753 23455778999
Q ss_pred HHHHHHHHcC--CcEEEEeC
Q 018446 279 YMTKICKLLG--LTALVEVH 296 (355)
Q Consensus 279 ~L~~~A~~LG--LeaLVEVH 296 (355)
.+.+.|.++| ..+++.|.
T Consensus 154 ~l~~~a~~~~~~~~V~lRVn 173 (443)
T 3vab_A 154 ILSARAVAAGKVAPVSLRIN 173 (443)
T ss_dssp HHHHHHHHHTCCEEEEEEEE
T ss_pred HHHHHHHhcCCCceEEEEEC
Confidence 9999999887 45777774
No 469
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=55.16 E-value=66 Score=29.55 Aligned_cols=111 Identities=15% Similarity=0.183 Sum_probs=70.0
Q ss_pred HHHHHHHHHcCceEEEEeccCCCCCC--CHHH----HHHHHhcCCCCCeec-----cc---c-ccCH--H-HHH-HHHHc
Q 018446 200 VEIARSYEKGGAACLSILTDEKYFKG--SFEN----LEAVRSAGVKCPLLC-----KE---F-IVDA--W-QIY-YARTK 260 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~fF~G--S~ed----L~~VR~a~v~lPVLr-----KD---F-IIdp--y-QI~-eAr~~ 260 (355)
...++.+...||+++=+--| ||.. +.++ +..+|+...++|+|. ++ | -.++ | +++ .+...
T Consensus 35 ~~~~~~~~~~~~D~vElRvD--~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~~ll~~~~~~ 112 (257)
T 2yr1_A 35 LREAEEVCRKQPDLLEWRAD--FFRAIDDQERVLATANGLRNIAGEIPILFTIRSEREGGQPIPLNEAEVRRLIEAICRS 112 (257)
T ss_dssp HHHHHHHHHSCCSEEEEEGG--GCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCEEEEEee--cccccCcHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCCCCHHHHHHHHHHHHHc
Confidence 34556666789999999999 6654 2443 346777522789882 21 2 2232 2 333 34445
Q ss_pred C-CcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeCC----H--HHHH----HHhccCCCeEEEe
Q 018446 261 G-ADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHD----E--REMD----RVLGIEGIELIGI 315 (355)
Q Consensus 261 G-ADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH~----~--eELe----rAl~l~ga~iIGI 315 (355)
| +|.|=+=... ++ .++.+++.++..|...++--|| . +|+. ++..+ ||+|+=|
T Consensus 113 g~~d~iDvEl~~-~~-~~~~l~~~~~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~-gaDivKi 175 (257)
T 2yr1_A 113 GAIDLVDYELAY-GE-RIADVRRMTEECSVWLVVSRHYFDGTPRKETLLADMRQAERY-GADIAKV 175 (257)
T ss_dssp TCCSEEEEEGGG-TT-HHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHT-TCSEEEE
T ss_pred CCCCEEEEECCC-Ch-hHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHHHHHHhc-CCCEEEE
Confidence 7 7776553333 33 7788999999999999999995 2 5543 44445 7776543
No 470
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=54.74 E-value=80 Score=25.17 Aligned_cols=100 Identities=9% Similarity=0.099 Sum_probs=67.8
Q ss_pred HHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHHH
Q 018446 201 EIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYM 280 (355)
Q Consensus 201 ~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L 280 (355)
.+|+...+.|...+-|-.| .+.+..+++. ..+++.-|. -++-.+.++-..+||+|++ ++=++.+-..+
T Consensus 21 ~la~~L~~~g~~v~vid~~-------~~~~~~~~~~--g~~~i~gd~-~~~~~l~~a~i~~ad~vi~--~~~~~~~n~~~ 88 (140)
T 3fwz_A 21 LLGEKLLASDIPLVVIETS-------RTRVDELRER--GVRAVLGNA-ANEEIMQLAHLECAKWLIL--TIPNGYEAGEI 88 (140)
T ss_dssp HHHHHHHHTTCCEEEEESC-------HHHHHHHHHT--TCEEEESCT-TSHHHHHHTTGGGCSEEEE--CCSCHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEECC-------HHHHHHHHHc--CCCEEECCC-CCHHHHHhcCcccCCEEEE--ECCChHHHHHH
Confidence 6788888889877666554 4566667653 567777775 3454555555667776543 23334444446
Q ss_pred HHHHHHc--CCcEEEEeCCHHHHHHHhccCCCeEE
Q 018446 281 TKICKLL--GLTALVEVHDEREMDRVLGIEGIELI 313 (355)
Q Consensus 281 ~~~A~~L--GLeaLVEVH~~eELerAl~l~ga~iI 313 (355)
...++.+ +...++-+++.+..+....+ |++.+
T Consensus 89 ~~~a~~~~~~~~iiar~~~~~~~~~l~~~-G~d~v 122 (140)
T 3fwz_A 89 VASARAKNPDIEIIARAHYDDEVAYITER-GANQV 122 (140)
T ss_dssp HHHHHHHCSSSEEEEEESSHHHHHHHHHT-TCSEE
T ss_pred HHHHHHHCCCCeEEEEECCHHHHHHHHHC-CCCEE
Confidence 6777776 67899999999999988776 88754
No 471
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=54.68 E-value=20 Score=34.76 Aligned_cols=132 Identities=14% Similarity=0.156 Sum_probs=78.2
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCH---
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPD--- 274 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~--- 274 (355)
+-.++|+.+.+.|...|=+= -|.+..+.++.++.+++.+.+.+++.-- --++--|..|..+|+|.|-+..+ +++
T Consensus 26 ~k~~ia~~L~~~Gv~~IE~g-~p~~~~~~~~~~~~i~~~~~~~~v~~~~-r~~~~di~~a~~~g~~~v~i~~~-~s~~~~ 102 (382)
T 2ztj_A 26 DKVEIAKALDEFGIEYIEVT-TPVASPQSRKDAEVLASLGLKAKVVTHI-QCRLDAAKVAVETGVQGIDLLFG-TSKYLR 102 (382)
T ss_dssp HHHHHHHHHHHHTCSEEEEC-CTTSCHHHHHHHHHHHTSCCSSEEEEEE-ESCHHHHHHHHHTTCSEEEEEEC-C-----
T ss_pred HHHHHHHHHHHcCcCEEEEc-CCcCCHHHHHHHHHHHhcCCCcEEEEEc-ccChhhHHHHHHcCCCEEEEEec-cCHHHH
Confidence 45678999999999998872 2444445566777777654455554310 01233478899999997665433 332
Q ss_pred -----------HHHHHHHHHHHHcC--CcEEEEeC-----CHHHH----HHHhccCCCeEEEeeCCCCCccccChhhHHh
Q 018446 275 -----------LDIRYMTKICKLLG--LTALVEVH-----DEREM----DRVLGIEGIELIGINNRNLETFEVDNSNTKK 332 (355)
Q Consensus 275 -----------~~L~~L~~~A~~LG--LeaLVEVH-----~~eEL----erAl~l~ga~iIGINNRdL~TfevDl~~t~~ 332 (355)
+.+.+.+++|++.| +++-+-.- +.+.+ +.+.+ . ++.|.+-.-.= -..+..+.+
T Consensus 103 ~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~-~-a~~i~l~DT~G---~~~P~~~~~ 177 (382)
T 2ztj_A 103 APHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAP-Y-VDRVGLADTVG---VATPRQVYA 177 (382)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGG-G-CSEEEEEETTS---CCCHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHHHH-h-cCEEEecCCCC---CCCHHHHHH
Confidence 45788899999999 77665433 33332 22333 2 66666643211 123666666
Q ss_pred hhccc
Q 018446 333 LLEGE 337 (355)
Q Consensus 333 L~~~~ 337 (355)
|...+
T Consensus 178 lv~~l 182 (382)
T 2ztj_A 178 LVREV 182 (382)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
No 472
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=54.59 E-value=12 Score=34.58 Aligned_cols=104 Identities=15% Similarity=0.252 Sum_probs=68.8
Q ss_pred HHHcCceEEEEeccCCCCCC---CHHHHHHHH---hcCCCCCe---ec---cccccCHH-------HHHHHHHcCCcchH
Q 018446 206 YEKGGAACLSILTDEKYFKG---SFENLEAVR---SAGVKCPL---LC---KEFIVDAW-------QIYYARTKGADAVL 266 (355)
Q Consensus 206 Ye~~GAaaISVLTD~~fF~G---S~edL~~VR---~a~v~lPV---Lr---KDFIIdpy-------QI~eAr~~GADAVL 266 (355)
-+++||+=|=.+++- .-+| |+..++.+| +. +++|| +| .||..++. .|..++.+|||+|.
T Consensus 17 A~~~GAdRIELc~~L-~~GGlTPS~g~i~~~~~~~~~-~~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV 94 (224)
T 2bdq_A 17 LDKAIISRVELCDNL-AVGGTTPSYGVIKEANQYLHE-KGISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELESDALV 94 (224)
T ss_dssp CCTTTCCEEEEEBCG-GGTCBCCCHHHHHHHHHHHHH-TTCEEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHcCCCEEEEcCCc-ccCCcCCCHHHHHHHHHhhhh-cCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEE
Confidence 346789988887753 2344 788999998 75 78885 44 49999965 45679999999987
Q ss_pred HHH----hcCCHHHHHHHHHHHHHcCCcEEE-----Ee--CCHHH-HHHHhccCCCeEEE
Q 018446 267 LIA----AVLPDLDIRYMTKICKLLGLTALV-----EV--HDERE-MDRVLGIEGIELIG 314 (355)
Q Consensus 267 LIa----aiL~~~~L~~L~~~A~~LGLeaLV-----EV--H~~eE-LerAl~l~ga~iIG 314 (355)
+=+ .-++.+.++.|++.|. ||.+-+ ++ .|..+ ++...++ |++=|-
T Consensus 95 ~G~Lt~dg~iD~~~~~~Li~~a~--~~~vTFHRAFD~~~~~d~~~ale~L~~l-Gv~rIL 151 (224)
T 2bdq_A 95 LGILTSNNHIDTEAIEQLLPATQ--GLPLVFHMAFDVIPKSDQKKSIDQLVAL-GFTRIL 151 (224)
T ss_dssp ECCBCTTSSBCHHHHHHHHHHHT--TCCEEECGGGGGSCTTTHHHHHHHHHHT-TCCEEE
T ss_pred EeeECCCCCcCHHHHHHHHHHhC--CCeEEEECchhccCCcCHHHHHHHHHHc-CCCEEE
Confidence 621 2356678999998887 555332 23 44333 4445555 654443
No 473
>3kzp_A LMO0111 protein, putative diguanylate cyclase/phosphodiesterase; EAL-domain, structural genomics, PSI-2; 2.00A {Listeria monocytogenes}
Probab=54.41 E-value=12 Score=32.43 Aligned_cols=112 Identities=14% Similarity=0.043 Sum_probs=63.0
Q ss_pred eEEeEeeecCCCCCCCCCCC-------CHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeecccccc-
Q 018446 178 ALIAEVKKASPSRGILREDF-------DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIV- 249 (355)
Q Consensus 178 aVIAEvKRaSPSkG~I~~~~-------Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFII- 249 (355)
.++.||--.......-.... ......+.+.+.|.. |++ | -|+..+..|..++....++=-|-.|++.
T Consensus 102 ~l~lEitE~~~~~~~~~~~~~~~~~~~~~~~~l~~Lr~~G~~-ial--D--DfG~g~ssl~~L~~l~~~~~ki~~~~~~~ 176 (235)
T 3kzp_A 102 RITVEMTEDIFDVPGHKRHLNANDKNAFILNKIKVIHGLGYH-IAI--D--DVSCGLNSLERVMSYLPYIIEIKFSLIHF 176 (235)
T ss_dssp GEEEEECCCCCCCCGGGTTSCHHHHHHHHHHHHHHHHHTTCE-EEE--C--STTSTTCCHHHHHHHGGGCSEEEEEGGGG
T ss_pred eEEEEEeccccccccchhhccccchhHHHHHHHHHHHHCCCE-EEE--E--eCCCCchhHHHHHhccCcceEEeccHHHh
Confidence 59999966554321000011 123455677777733 333 3 4665555555554321122234455532
Q ss_pred CHHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEE-eCCHHHHHHHhccCCCe
Q 018446 250 DAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVE-VHDEREMDRVLGIEGIE 311 (355)
Q Consensus 250 dpyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVE-VH~~eELerAl~l~ga~ 311 (355)
....-... ..-++.++.+|+++|+.+++| |.|.++++.+..+ |++
T Consensus 177 ~~~~~~~~----------------~~~~~~i~~~a~~lg~~viaeGVEt~~~~~~l~~~-G~~ 222 (235)
T 3kzp_A 177 KNIPLEDL----------------LLFIKAWANFAQKNKLDFVVEGIETKETMTLLESH-GVS 222 (235)
T ss_dssp TTSCHHHH----------------HHHHHHHHHHHHHTTCEEEEEEECSTHHHHHHHHT-TCC
T ss_pred hcCCcHHH----------------HHHHHHHHHHHHHcCCEEEEEEecCHHHHHHHHHc-CCC
Confidence 11000000 123677899999999999998 9999999998887 765
No 474
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=54.28 E-value=29 Score=34.81 Aligned_cols=94 Identities=14% Similarity=0.214 Sum_probs=68.4
Q ss_pred CCHHHHHHHH----HHcCceEEEEeccCCCCCCCHHHHHHHHhcCC--CCCeecccccc-CHHHHHHHHHcC-CcchHHH
Q 018446 197 FDPVEIARSY----EKGGAACLSILTDEKYFKGSFENLEAVRSAGV--KCPLLCKEFIV-DAWQIYYARTKG-ADAVLLI 268 (355)
Q Consensus 197 ~Dp~~iA~~Y----e~~GAaaISVLTD~~fF~GS~edL~~VR~a~v--~lPVLrKDFII-dpyQI~eAr~~G-ADAVLLI 268 (355)
+++.+.++.| ++.+ |.-+ |+.+-..+++.++.+++. + ++||.--|.++ .++++.++...| +|+|++=
T Consensus 289 ~t~~eai~~~~~lle~y~---i~~I-EdPl~~dD~eg~~~L~~~-~~~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iK 363 (449)
T 3uj2_A 289 FASEELVAHWKSLCERYP---IVSI-EDGLDEEDWEGWQYMTRE-LGDKIQLVGDDLFVTNTERLNKGIKERCGNSILIK 363 (449)
T ss_dssp EEHHHHHHHHHHHHHHSC---EEEE-ESCSCTTCHHHHHHHHHH-HTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC
T ss_pred cCHHHHHHHHHHHHHhcC---ceEE-ECCCCcchHHHHHHHHHH-hCCCceEECCcceeCCHHHHHHHHHcCCCCEEEEC
Confidence 4566555444 4444 3333 555778899999999885 4 78888889887 599999988777 4777773
Q ss_pred H-hcCCHHHHHHHHHHHHHcCCcEEEEe
Q 018446 269 A-AVLPDLDIRYMTKICKLLGLTALVEV 295 (355)
Q Consensus 269 a-aiL~~~~L~~L~~~A~~LGLeaLVEV 295 (355)
+ .+=+--+.....++|+..|+.++|--
T Consensus 364 v~~iGGiTea~kia~lA~~~Gi~~~v~H 391 (449)
T 3uj2_A 364 LNQIGTVSETLEAIKMAHKAGYTAVVSH 391 (449)
T ss_dssp HHHHCSHHHHHHHHHHHHHTTCEEEEEC
T ss_pred ccccCCHHHHHHHHHHHHHcCCeEEEeC
Confidence 3 33344577888999999999988854
No 475
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=54.18 E-value=14 Score=33.57 Aligned_cols=119 Identities=22% Similarity=0.241 Sum_probs=80.1
Q ss_pred HHHHHHHHHHcCceEEEEe-ccCCCCCCCH---HHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCH
Q 018446 199 PVEIARSYEKGGAACLSIL-TDEKYFKGSF---ENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPD 274 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVL-TD~~fF~GS~---edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~ 274 (355)
..+-|+..+.+|+++|.+- |-..|+.|.- .....++++ +++|++. +-+-++..++..|+.-|-|+.- -..
T Consensus 55 l~~aa~~L~~ag~d~i~~aCtsas~~~G~~~~~~~~~~l~~~-~~iPv~~----~~~A~~~al~~~g~~rvglltp-y~~ 128 (240)
T 3ixl_A 55 VVDHARRLQKQGAAVVSLMCTSLSFYRGAAFNAALTVAMREA-TGLPCTT----MSTAVLNGLRALGVRRVALATA-YID 128 (240)
T ss_dssp HHHHHHHHHHTTEEEEEECCHHHHHTTCHHHHHHHHHHHHHH-HSSCEEE----HHHHHHHHHHHTTCSEEEEEES-SCH
T ss_pred HHHHHHHhccCCCCEEEECCcHHHHhcccchHHHHHHHHHhc-cCCCEEC----HHHHHHHHHHHhCCCEEEEEeC-ChH
Confidence 3456788889999999995 5556777654 455566664 7899985 5677888889999988887765 333
Q ss_pred HHHH-HHHHHHHHcCCcEEEEeC------------CHHHHHHH----h-ccCCCeEEEeeCCCCCccc
Q 018446 275 LDIR-YMTKICKLLGLTALVEVH------------DEREMDRV----L-GIEGIELIGINNRNLETFE 324 (355)
Q Consensus 275 ~~L~-~L~~~A~~LGLeaLVEVH------------~~eELerA----l-~l~ga~iIGINNRdL~Tfe 324 (355)
++. .+.++-...|++++.-.+ +.+++..+ + ...|++.|-+---||.++.
T Consensus 129 -~~~~~~~~~l~~~Giev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~adaivL~CT~l~~l~ 195 (240)
T 3ixl_A 129 -DVNERLAAFLAEESLVPTGCRSLGITGVEAMARVDTATLVDLCVRAFEAAPDSDGILLSSGGLLTLD 195 (240)
T ss_dssp -HHHHHHHHHHHHTTCEEEEEEECCCCCHHHHHTCCHHHHHHHHHHHHHTSTTCSEEEEECTTSCCTT
T ss_pred -HHHHHHHHHHHHCCCEEeccccCCCCCcchhhcCCHHHHHHHHHHHhhcCCCCCEEEEeCCCCchhh
Confidence 443 344677778999876433 23333332 3 3346776666677777775
No 476
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=54.13 E-value=72 Score=25.03 Aligned_cols=100 Identities=18% Similarity=0.199 Sum_probs=64.9
Q ss_pred HHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHHH
Q 018446 201 EIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYM 280 (355)
Q Consensus 201 ~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L 280 (355)
.+|+.+.+.|...+-+-. +.+.+..+++. ...++.-|. -++-.+.++...+||+|++-.. +++.-...
T Consensus 20 ~la~~L~~~g~~V~~id~-------~~~~~~~~~~~--~~~~~~gd~-~~~~~l~~~~~~~~d~vi~~~~--~~~~n~~~ 87 (141)
T 3llv_A 20 GLVRELTAAGKKVLAVDK-------SKEKIELLEDE--GFDAVIADP-TDESFYRSLDLEGVSAVLITGS--DDEFNLKI 87 (141)
T ss_dssp HHHHHHHHTTCCEEEEES-------CHHHHHHHHHT--TCEEEECCT-TCHHHHHHSCCTTCSEEEECCS--CHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEEC-------CHHHHHHHHHC--CCcEEECCC-CCHHHHHhCCcccCCEEEEecC--CHHHHHHH
Confidence 678888888887654433 35666666653 345555553 3555565554557887765443 45444556
Q ss_pred HHHHHHcC-CcEEEEeCCHHHHHHHhccCCCeEE
Q 018446 281 TKICKLLG-LTALVEVHDEREMDRVLGIEGIELI 313 (355)
Q Consensus 281 ~~~A~~LG-LeaLVEVH~~eELerAl~l~ga~iI 313 (355)
...++++| ...++-+++.+..+....+ |++.+
T Consensus 88 ~~~a~~~~~~~iia~~~~~~~~~~l~~~-G~~~v 120 (141)
T 3llv_A 88 LKALRSVSDVYAIVRVSSPKKKEEFEEA-GANLV 120 (141)
T ss_dssp HHHHHHHCCCCEEEEESCGGGHHHHHHT-TCSEE
T ss_pred HHHHHHhCCceEEEEEcChhHHHHHHHc-CCCEE
Confidence 67888887 3467889998888887776 77633
No 477
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=53.87 E-value=19 Score=34.18 Aligned_cols=133 Identities=18% Similarity=0.180 Sum_probs=78.0
Q ss_pred CccHHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEE-EeccC--------CCCCCCHHHH
Q 018446 160 ARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLS-ILTDE--------KYFKGSFENL 230 (355)
Q Consensus 160 ~rdF~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaIS-VLTD~--------~fF~GS~edL 230 (355)
.+.+.+++.+ ....|+...|..|.. -..+--..| .+|+..-+ .|.|. .+.+|=.+.+
T Consensus 134 t~~~v~~~~g------t~v~i~~tRkt~P~~-------r~~e~~Av~-~GG~~~hr~~l~d~vlikdnhi~~~Gti~~ai 199 (296)
T 1qap_A 134 VRRYVGLLAG------TQTQLLDTRKTLPGL-------RTALKYAVL-CGGGANHRLGLTDAFLIKENHIIASGSVRQAV 199 (296)
T ss_dssp HHHHHHTTTT------SSCEEECCSCCCTTC-------HHHHHHHHH-HHTCBCCCSSSSSCEEECHHHHHHHSSHHHHH
T ss_pred HHHHHHHhCC------CCeEEEEeCCCCccc-------HHHHHHHHH-HCCchhhccccccEEEEEcCCeeccCCHHHHH
Confidence 4556665542 346888888888853 222222334 45555111 11111 2233335677
Q ss_pred HHHHhcCCC--CCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeC---CHHHHHHHh
Q 018446 231 EAVRSAGVK--CPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRVL 305 (355)
Q Consensus 231 ~~VR~a~v~--lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH---~~eELerAl 305 (355)
+.+|+.... +=|.+.. .-|+.+|..+|||.|.| .-.+.++++.+.+ .++=.+.+|+. |++.+....
T Consensus 200 ~~~r~~~~~~kI~vev~t----lee~~eA~~aGaD~I~l--d~~~~e~l~~~v~---~~~~~~~I~ASGGIt~~~i~~~a 270 (296)
T 1qap_A 200 EKAFWLHPDVPVEVEVEN----LDELDDALKAGADIIML--DNFNTDQMREAVK---RVNGQARLEVSGNVTAETLREFA 270 (296)
T ss_dssp HHHHHHSTTSCEEEEESS----HHHHHHHHHTTCSEEEE--SSCCHHHHHHHHH---TTCTTCCEEECCCSCHHHHHHHH
T ss_pred HHHHHhCCCCcEEEEeCC----HHHHHHHHHcCCCEEEE--CCCCHHHHHHHHH---HhCCCCeEEEECCCCHHHHHHHH
Confidence 788875222 1123322 26899999999999988 3466666666554 34335667665 588888877
Q ss_pred ccCCCeEEEee
Q 018446 306 GIEGIELIGIN 316 (355)
Q Consensus 306 ~l~ga~iIGIN 316 (355)
.. |++.||+-
T Consensus 271 ~~-GvD~isvG 280 (296)
T 1qap_A 271 ET-GVDFISVG 280 (296)
T ss_dssp HT-TCSEEECS
T ss_pred Hc-CCCEEEEe
Confidence 75 89999884
No 478
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=53.76 E-value=10 Score=36.18 Aligned_cols=64 Identities=22% Similarity=0.323 Sum_probs=45.0
Q ss_pred HHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeecc--ccccCH-HHHHHHHHcCCcchHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCK--EFIVDA-WQIYYARTKGADAVLLI 268 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrK--DFIIdp-yQI~eAr~~GADAVLLI 268 (355)
..+=|++|+++||++|-|-.= -+.+.++.++++ +++|||.. .|.-.| +=..|-..+|..-|..-
T Consensus 173 ai~Ra~ay~~AGAD~if~~~~-----~~~ee~~~~~~~-~~~Pl~~n~~~~g~tp~~~~~eL~~lGv~~v~~~ 239 (298)
T 3eoo_A 173 AIERAIAYVEAGADMIFPEAM-----KTLDDYRRFKEA-VKVPILANLTEFGSTPLFTLDELKGANVDIALYC 239 (298)
T ss_dssp HHHHHHHHHHTTCSEEEECCC-----CSHHHHHHHHHH-HCSCBEEECCTTSSSCCCCHHHHHHTTCCEEEEC
T ss_pred HHHHHHhhHhcCCCEEEeCCC-----CCHHHHHHHHHH-cCCCeEEEeccCCCCCCCCHHHHHHcCCeEEEEc
Confidence 446778999999999977442 379999999986 78999763 222122 23566677899877543
No 479
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=53.60 E-value=32 Score=32.73 Aligned_cols=69 Identities=28% Similarity=0.349 Sum_probs=51.8
Q ss_pred CCCHHHHHHHHHHcCceEEEEeccCCC--CCC----CHHHHHHHHhcCCCCCe-eccccccCHHHHHHHHHcCCcch
Q 018446 196 DFDPVEIARSYEKGGAACLSILTDEKY--FKG----SFENLEAVRSAGVKCPL-LCKEFIVDAWQIYYARTKGADAV 265 (355)
Q Consensus 196 ~~Dp~~iA~~Ye~~GAaaISVLTD~~f--F~G----S~edL~~VR~a~v~lPV-LrKDFIIdpyQI~eAr~~GADAV 265 (355)
..||.+..+-+++-|.++|+|-.-.-+ |.| +++-|+.++++ +++|+ |.===.++.-||.+|..+|.--|
T Consensus 158 yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~-v~vpLVlHGgSG~~~e~i~~ai~~Gv~Ki 233 (288)
T 3q94_A 158 YADPAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDF-TGVPLVLHGGTGIPTADIEKAISLGTSKI 233 (288)
T ss_dssp CCCHHHHHHHHHHHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHH-HCSCEEECCCTTCCHHHHHHHHHTTEEEE
T ss_pred CCCHHHHHHHHHHHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHh-cCCCEEEeCCCCCCHHHHHHHHHcCCeEE
Confidence 468999888888899999999755432 455 68999999986 88994 44445677777777777775443
No 480
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=53.35 E-value=3.2 Score=38.39 Aligned_cols=85 Identities=21% Similarity=0.185 Sum_probs=53.2
Q ss_pred HHHHHHHHHcCceEEEEe-ccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHH
Q 018446 200 VEIARSYEKGGAACLSIL-TDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIR 278 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVL-TD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~ 278 (355)
.++++...++||++|=+= +..--....++.++++|+ +++||+--=-...+ + ..|+|++ ++..++.. +-.
T Consensus 23 ~~~~~~l~~~GaD~ielG~S~Gvt~~~~~~~v~~ir~--~~~Pivlm~y~~n~--i----~~G~dg~-iiPdLp~e-e~~ 92 (240)
T 1viz_A 23 DEQLEILCESGTDAVIIGGSDGVTEDNVLRMMSKVRR--FLVPCVLEVSAIEA--I----VPGFDLY-FIPSVLNS-KNA 92 (240)
T ss_dssp HHHHHHHHTSCCSEEEECC----CHHHHHHHHHHHTT--SSSCEEEECSCGGG--C----CSCCSEE-EEEEETTB-SSG
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhhC--cCCCEEEecCcccc--c----cCCCCEE-EEcccCcc-cCh
Confidence 467889999999998653 222222235788888886 68998841111011 1 6799984 45555544 233
Q ss_pred HH-----HHHHHHcC-----CcEEEE
Q 018446 279 YM-----TKICKLLG-----LTALVE 294 (355)
Q Consensus 279 ~L-----~~~A~~LG-----LeaLVE 294 (355)
++ ...++++| ++.+-|
T Consensus 93 ~~~~g~~~~a~~~~g~~~~~l~~i~~ 118 (240)
T 1viz_A 93 DWIVGMHQKAMKEYGELMSMEEIVAE 118 (240)
T ss_dssp GGTTHHHHHHHHHCHHHHHHSCEEEE
T ss_pred hhhcchhHHHHHHcCCCCcceeeeec
Confidence 44 57789999 888874
No 481
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=53.33 E-value=20 Score=34.97 Aligned_cols=99 Identities=19% Similarity=0.208 Sum_probs=67.4
Q ss_pred CCHHH---HHHHHHHcCceEEEEeccCCCCCC----CHHHHHHHHhc----CCCCCeeccccccCHHHHHHHHHcC-Ccc
Q 018446 197 FDPVE---IARSYEKGGAACLSILTDEKYFKG----SFENLEAVRSA----GVKCPLLCKEFIVDAWQIYYARTKG-ADA 264 (355)
Q Consensus 197 ~Dp~~---iA~~Ye~~GAaaISVLTD~~fF~G----S~edL~~VR~a----~v~lPVLrKDFIIdpyQI~eAr~~G-ADA 264 (355)
+++.+ +++..++.|.. +-+.-|+.+-.| +++.+..+++. ++.+||..-|.+.+.+++.+....| +|.
T Consensus 249 ~~~~~A~~~~~~L~~~~~~-~~l~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~ 327 (413)
T 1kko_A 249 MDPVRCAEYIASLEKEAQG-LPLYIEGPVDAGNKPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSCHM 327 (413)
T ss_dssp TCHHHHHHHHHHTGGGGTT-SCEEEECCCCCSSHHHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCCSE
T ss_pred CCHHHHHHHHHHHHhccCC-cceEEECCcCCCCCcccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHhCCCCE
Confidence 45554 44444443322 222445566544 77788888763 1689999999999999999988877 566
Q ss_pred hHH-HHhcCCHHHHHHHHHHHHHcCCcEEEEeC
Q 018446 265 VLL-IAAVLPDLDIRYMTKICKLLGLTALVEVH 296 (355)
Q Consensus 265 VLL-IaaiL~~~~L~~L~~~A~~LGLeaLVEVH 296 (355)
|.+ +..+=+-.+...+.++|+..|+.+.+-..
T Consensus 328 i~ik~~~~GGitea~~i~~~A~~~gi~~~~~~~ 360 (413)
T 1kko_A 328 VQIKTPDLGGIHNIVDAVLYCNKHGMEAYQGGT 360 (413)
T ss_dssp EEECGGGGSSTHHHHHHHHHHHHHTCEEEECCC
T ss_pred EEeCccccCCHHHHHHHHHHHHHcCCeEEecCC
Confidence 665 33332445678899999999999877544
No 482
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=53.20 E-value=14 Score=35.04 Aligned_cols=68 Identities=19% Similarity=0.193 Sum_probs=46.4
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccc--ccc-CHHHHHHHHHcCCcchHHHHhc
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKE--FIV-DAWQIYYARTKGADAVLLIAAV 271 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKD--FII-dpyQI~eAr~~GADAVLLIaai 271 (355)
+..+-|++|+++||++|-+=.= -+.+.++.+.++ +++|+|..= |.- +.+-..+-..+|.+.|..-.+.
T Consensus 168 ~ai~ra~ay~eAGAd~i~~e~~-----~~~~~~~~i~~~-~~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~ 238 (295)
T 1xg4_A 168 AAIERAQAYVEAGAEMLFPEAI-----TELAMYRQFADA-VQVPILANITEFGATPLFTTDELRSAHVAMALYPLSA 238 (295)
T ss_dssp HHHHHHHHHHHTTCSEEEETTC-----CSHHHHHHHHHH-HCSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCC-----CCHHHHHHHHHH-cCCCEEEEecccCCCCCCCHHHHHHcCCCEEEEChHH
Confidence 4567889999999999876442 268899999986 899987521 111 1122456677899988664333
No 483
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=52.74 E-value=10 Score=35.95 Aligned_cols=88 Identities=20% Similarity=0.189 Sum_probs=59.3
Q ss_pred CC-HHHHHHHHhcCCC-CCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeC---CHH
Q 018446 225 GS-FENLEAVRSAGVK-CPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DER 299 (355)
Q Consensus 225 GS-~edL~~VR~a~v~-lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH---~~e 299 (355)
|+ .+-++.+|+.... .+|-. + +=+.-|+.+|..+|||.|+|=- ++.+++++..+.....+-.+.+|+. |++
T Consensus 177 G~i~~av~~ar~~~~~~~~I~V-E-V~tleea~eA~~aGaD~I~LDn--~~~e~l~~av~~l~~~~~~v~ieASGGIt~e 252 (285)
T 1o4u_A 177 GSAERAVQEVRKIIPFTTKIEV-E-VENLEDALRAVEAGADIVMLDN--LSPEEVKDISRRIKDINPNVIVEVSGGITEE 252 (285)
T ss_dssp SSHHHHHHHHHTTSCTTSCEEE-E-ESSHHHHHHHHHTTCSEEEEES--CCHHHHHHHHHHHHHHCTTSEEEEEECCCTT
T ss_pred CCHHHHHHHHHHhCCCCceEEE-E-eCCHHHHHHHHHcCCCEEEECC--CCHHHHHHHHHHhhccCCCceEEEECCCCHH
Confidence 55 4567777764212 34333 1 2247899999999999987744 7888998888887765555677764 466
Q ss_pred HHHHHhccCCCeEEEeeC
Q 018446 300 EMDRVLGIEGIELIGINN 317 (355)
Q Consensus 300 ELerAl~l~ga~iIGINN 317 (355)
.+...... |+++|++-.
T Consensus 253 ni~~~a~t-GVD~IsvGs 269 (285)
T 1o4u_A 253 NVSLYDFE-TVDVISSSR 269 (285)
T ss_dssp TGGGGCCT-TCCEEEEGG
T ss_pred HHHHHHHc-CCCEEEEeH
Confidence 66665664 788887654
No 484
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=52.48 E-value=34 Score=34.05 Aligned_cols=96 Identities=8% Similarity=0.120 Sum_probs=67.4
Q ss_pred CCCHHHHHHHH----HHcCceEEEEeccCCCCCCCHHHHHHHHhcCCC--CCeeccc-cccCHHHHHHHHHcCC-cchHH
Q 018446 196 DFDPVEIARSY----EKGGAACLSILTDEKYFKGSFENLEAVRSAGVK--CPLLCKE-FIVDAWQIYYARTKGA-DAVLL 267 (355)
Q Consensus 196 ~~Dp~~iA~~Y----e~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~--lPVLrKD-FIIdpyQI~eAr~~GA-DAVLL 267 (355)
.+++.+..+.| ++.+ |- .-|..+-..+++.+..+++. +. +|+.--| |+-.++.+.++...|| |+|++
T Consensus 262 ~~t~~eai~~~~~ll~~y~---i~-~IEdPl~~dD~eg~~~L~~~-~~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~i 336 (428)
T 3tqp_A 262 QLTSEEMIDRLTEWTKKYP---VI-SIEDGLSENDWAGWKLLTER-LENKVQLVGDDIFVTNPDILEKGIKKNIANAILV 336 (428)
T ss_dssp CBCHHHHHHHHHHHHHHSC---EE-EEECCSCTTCHHHHHHHHHH-HTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEE
T ss_pred ccCHHHHHHHHHHHHhhcc---cc-eEeCCCCcccHHHHHHHHHh-cCCCcceeccccccCCHHHHHHHHHhCCCCEEEe
Confidence 34665554444 3444 33 33555788999999999875 55 5556677 6678999999887775 77777
Q ss_pred -HHhcCCHHHHHHHHHHHHHcCCcEEEEeC
Q 018446 268 -IAAVLPDLDIRYMTKICKLLGLTALVEVH 296 (355)
Q Consensus 268 -IaaiL~~~~L~~L~~~A~~LGLeaLVEVH 296 (355)
+..+=+--+.....++|+..|+.++|--.
T Consensus 337 Kv~~iGGiTealkia~lA~~~G~~~~v~H~ 366 (428)
T 3tqp_A 337 KLNQIGTLTETLATVGLAKSNKYGVIISHR 366 (428)
T ss_dssp CHHHHCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred cccccCCHHHHHHHHHHHHHcCCeEEEeCC
Confidence 33443455778889999999999988543
No 485
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=52.38 E-value=4.3 Score=35.19 Aligned_cols=75 Identities=16% Similarity=0.062 Sum_probs=50.9
Q ss_pred HHHHHHHcCceEEEEeccCCCCCCC------HHHHHHHHhcCC-----CCCeeccccccCHHHHHHHHHcCCcchHHHHh
Q 018446 202 IARSYEKGGAACLSILTDEKYFKGS------FENLEAVRSAGV-----KCPLLCKEFIVDAWQIYYARTKGADAVLLIAA 270 (355)
Q Consensus 202 iA~~Ye~~GAaaISVLTD~~fF~GS------~edL~~VR~a~v-----~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaa 270 (355)
..+.|. .+++.+-+.|=..-|.|. ++.+..+|+. . ++|+. =++.|.+-.+.+++.+|||+|...-+
T Consensus 124 ~~~~~~-~~~d~vl~~~~~~g~~g~~~~~~~~~~i~~~~~~-~~~~~~~~~i~-v~GGI~~~~~~~~~~~Gad~vvvGsa 200 (220)
T 2fli_A 124 ALEPLL-DLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKW-RDEKGLSFDIE-VDGGVDNKTIRACYEAGANVFVAGSY 200 (220)
T ss_dssp GGGGGT-TTCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHH-HHHTTCCCEEE-EESSCCTTTHHHHHHHTCCEEEESHH
T ss_pred HHHHHH-hhCCEEEEEEECCCCcccccCHHHHHHHHHHHHH-HHhcCCCceEE-EECcCCHHHHHHHHHcCCCEEEEChH
Confidence 344554 358877654433345553 3556777653 3 56754 58999999999999999999999888
Q ss_pred cCCHHHHHH
Q 018446 271 VLPDLDIRY 279 (355)
Q Consensus 271 iL~~~~L~~ 279 (355)
+....+.++
T Consensus 201 i~~~~d~~~ 209 (220)
T 2fli_A 201 LFKASDLVS 209 (220)
T ss_dssp HHTSSCHHH
T ss_pred HhCCCCHHH
Confidence 876544444
No 486
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=52.37 E-value=30 Score=26.41 Aligned_cols=67 Identities=18% Similarity=0.274 Sum_probs=53.3
Q ss_pred ccCHHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccC-CCeEEEe
Q 018446 248 IVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIE-GIELIGI 315 (355)
Q Consensus 248 IIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~-ga~iIGI 315 (355)
+.-.-|+..+...|---+++|+.=.+++-...+..+|...|. +++.+.|.+||-+|.... ++..++|
T Consensus 13 ~~G~~~v~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~I-p~~~v~sk~eLG~a~Gk~~~~~~~ai 80 (82)
T 3v7e_A 13 IIGTKQTVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGI-SVSMVESMKKLGKACGIEVGAAAVAI 80 (82)
T ss_dssp EESHHHHHHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHTC-CEEEESCHHHHHHHHTCSSCCSEEEE
T ss_pred eEcHHHHHHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCC-CEEEECCHHHHHHHhCCCCCEEEEEE
Confidence 445678888888888788888888888777778899999997 677899999999998653 4555554
No 487
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=52.29 E-value=6.2 Score=37.46 Aligned_cols=140 Identities=21% Similarity=0.174 Sum_probs=83.3
Q ss_pred CCCccHHHHHHhhhhcCCCc-eEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEE-------eccC--CCCCCCH
Q 018446 158 PPARDFIGALMAANQRTGLP-ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSI-------LTDE--KYFKGSF 227 (355)
Q Consensus 158 pp~rdF~~aL~~~~~~~g~~-aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISV-------LTD~--~fF~GS~ 227 (355)
..++.+..++... .| ..|+.-.|..|.- -.. .+++...+|+..=+. +-|. .+|+|-.
T Consensus 118 T~t~~~v~a~~~~-----~~~~~~~~tRkt~p~~-------r~~-e~~A~~~GG~~~hr~~l~d~vlik~~Hi~~~g~~~ 184 (299)
T 2jbm_A 118 SAAAAAVEAARGA-----GWTGHVAGTRKTTPGF-------RLV-EKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGGVE 184 (299)
T ss_dssp HHHHHHHHHHHHT-----TCCSEEECCSCCCTTC-------HHH-HHHHHHHTTCBCCCCSTTSSEEECHHHHHHHTSHH
T ss_pred HHHHHHHHHhcCC-----CCceEEeecCCCChhh-------HHH-HHHHHHHCCCCceecCccceEEecccHHHHcCCHH
Confidence 3456788888653 12 5888888888842 122 223333567662111 2221 1233435
Q ss_pred HHHHHHHhcCCC-CC--eeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeC---CHHHH
Q 018446 228 ENLEAVRSAGVK-CP--LLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREM 301 (355)
Q Consensus 228 edL~~VR~a~v~-lP--VLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH---~~eEL 301 (355)
+.++.+|+.... .+ +.+. +.-|+.+|..+|||.|.| .-.+.++++.+.+....-.=.+.+|+. |++.+
T Consensus 185 ~ai~~~r~~~~~~~~i~vev~----tlee~~~A~~aGaD~I~l--d~~~~~~l~~~v~~l~~~~~~~~I~ASGGIt~~ni 258 (299)
T 2jbm_A 185 KAVRAARQAADFALKVEVECS----SLQEAVQAAEAGADLVLL--DNFKPEELHPTATVLKAQFPSVAVEASGGITLDNL 258 (299)
T ss_dssp HHHHHHHHHHTTTSCEEEEES----SHHHHHHHHHTTCSEEEE--ESCCHHHHHHHHHHHHHHCTTSEEEEESSCCTTTH
T ss_pred HHHHHHHHhCCcCCeEEEecC----CHHHHHHHHHcCCCEEEE--CCCCHHHHHHHHHHhhccCCCeeEEEECCCCHHHH
Confidence 677778774211 22 2222 236899999999999987 447788888777766542222455543 57777
Q ss_pred HHHhccCCCeEEEeeC
Q 018446 302 DRVLGIEGIELIGINN 317 (355)
Q Consensus 302 erAl~l~ga~iIGINN 317 (355)
...... |++.||+-.
T Consensus 259 ~~~~~a-GaD~i~vGs 273 (299)
T 2jbm_A 259 PQFCGP-HIDVISMGM 273 (299)
T ss_dssp HHHCCT-TCCEEECTH
T ss_pred HHHHHC-CCCEEEECh
Confidence 777775 999999854
No 488
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=52.21 E-value=11 Score=34.82 Aligned_cols=108 Identities=14% Similarity=0.164 Sum_probs=64.9
Q ss_pred eEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccc-cCHHHHHH
Q 018446 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFI-VDAWQIYY 256 (355)
Q Consensus 178 aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFI-IdpyQI~e 256 (355)
.|+.||--.+... ..-......+.+.+.|.. |+ -| -||..+..|..++.. |+ |+| ||.--|..
T Consensus 148 ~l~lEItE~~~~~----~~~~~~~~l~~Lr~~G~~-ia--lD--DFGtG~ssl~~L~~l----~~---d~iKID~sfv~~ 211 (294)
T 2r6o_A 148 CLELEITENVMLV----MTDEVRTCLDALRARGVR-LA--LD--DFGTGYSSLSYLSQL----PF---HGLKIDQSFVRK 211 (294)
T ss_dssp GEEEEEEGGGGGG----CCHHHHHHHHHHHHHTCE-EE--EE--EETSSCBCHHHHHHS----CC---CEEEECHHHHTT
T ss_pred EEEEEEeCCchhh----ChHHHHHHHHHHHHCCCE-EE--EE--CCCCCchhHHHHHhC----CC---CEEEECHHHHhh
Confidence 4899996654421 111234556677777743 22 23 366666666666653 32 333 44332211
Q ss_pred HHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEE-eCCHHHHHHHhccCCCeE
Q 018446 257 ARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVE-VHDEREMDRVLGIEGIEL 312 (355)
Q Consensus 257 Ar~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVE-VH~~eELerAl~l~ga~i 312 (355)
. ..|.- ...-++.++.+|+++|+.+++| |.|.++++.+.++ |++.
T Consensus 212 i---~~~~~-------~~~iv~~ii~la~~lg~~vvAEGVEt~~q~~~l~~l-G~d~ 257 (294)
T 2r6o_A 212 I---PAHPS-------ETQIVTTILALARGLGMEVVAEGIETAQQYAFLRDR-GCEF 257 (294)
T ss_dssp T---TTSHH-------HHHHHHHHHHHHHHTTCEEEECCCCSHHHHHHHHHT-TCCE
T ss_pred h---hcChH-------HHHHHHHHHHHHHHCCCEEEEecCCcHHHHHHHHHc-CCCE
Confidence 0 11100 0113677899999999999999 8999999999887 8765
No 489
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=52.06 E-value=23 Score=32.69 Aligned_cols=55 Identities=15% Similarity=0.230 Sum_probs=41.0
Q ss_pred HHHcCCcchHHHH-------------hcCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHhccCCCeE
Q 018446 257 ARTKGADAVLLIA-------------AVLPDLDIRYMTKICKLLGLTALVEVHDEREMDRVLGIEGIEL 312 (355)
Q Consensus 257 Ar~~GADAVLLIa-------------aiL~~~~L~~L~~~A~~LGLeaLVEVH~~eELerAl~l~ga~i 312 (355)
+...|+|.|-+.. ..++++++..+++.|++.|+...+-+++..+++.++++ |+..
T Consensus 175 ~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~i~~~~~~-g~~~ 242 (408)
T 3be7_A 175 NRKYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHNHGMKVAAHAHGLIGIKAAIKA-GVDS 242 (408)
T ss_dssp HHHTTCSEEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHH-TCSE
T ss_pred HHhcCCCEEEEEecCCcCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCCE
Confidence 4456777653331 34678899999999999999999998888877777765 5543
No 490
>3pjx_A Cyclic dimeric GMP binding protein; ggdef-EAL tandem domain, C-DI-GMP receptor, lyase; 2.00A {Pseudomonas fluorescens} PDB: 3pjw_A 3pju_A* 3pjt_A* 3pfm_A
Probab=51.98 E-value=17 Score=34.69 Aligned_cols=109 Identities=18% Similarity=0.246 Sum_probs=63.2
Q ss_pred eEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHH
Q 018446 178 ALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYA 257 (355)
Q Consensus 178 aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eA 257 (355)
.++.||--... ..+.......+.+.+.|.. |+ -| -|+..+..|..++...++.==+-+.|+-+-
T Consensus 309 ~l~lEitE~~~-----~~~~~~~~~~~~l~~~G~~-ia--lD--dfG~g~ssl~~L~~l~~d~iKiD~~~v~~~------ 372 (430)
T 3pjx_A 309 RLTLEIGEEQL-----PEQAVLEQLTRRLRELGFS-LS--LQ--RFGGRFSMIGNLARLGLAYLKIDGSYIRAI------ 372 (430)
T ss_dssp GEEEEEEGGGC-----CCHHHHHHHHHHHHHHTCE-EE--EE--EECCCHHHHCTHHHHCCSCEEECGGGTTTT------
T ss_pred eEEEEEECccc-----cccHHHHHHHHHHHHCCCE-EE--Ee--CCCCCchhHHHHHhCCCCEEEECHHHHHhH------
Confidence 48888855332 1221122333556666632 22 23 478888888777764222212223333210
Q ss_pred HHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEE-eCCHHHHHHHhccCCCeEE
Q 018446 258 RTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVE-VHDEREMDRVLGIEGIELI 313 (355)
Q Consensus 258 r~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVE-VH~~eELerAl~l~ga~iI 313 (355)
..|.- ...-++.++.+|+.+|+.+++| |.|+++++.+..+ |++.+
T Consensus 373 ---~~~~~-------~~~~~~~i~~~a~~l~~~viaeGVEt~~~~~~l~~~-g~~~~ 418 (430)
T 3pjx_A 373 ---DQESD-------KRLFIEAIQRAAHSIDLPLIAERVETEGELSVIREM-GLYGV 418 (430)
T ss_dssp ---TTCHH-------HHHHHHHHHHHHHTTTCCEEECCCCCHHHHHHHHHT-TCSEE
T ss_pred ---hcChh-------hHHHHHHHHHHHHHCCCcEEEEecCCHHHHHHHHHc-CCCee
Confidence 00000 0113677899999999999999 9999999999887 87654
No 491
>4ecl_A Serine racemase, vantg; antibiotic resistance, vancomycin resistance, center for STR genomics of infectious diseases (csgid); HET: MSE; 2.02A {Enterococcus faecalis}
Probab=51.82 E-value=44 Score=32.14 Aligned_cols=103 Identities=12% Similarity=0.160 Sum_probs=67.2
Q ss_pred CHHHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHH
Q 018446 198 DPVEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDI 277 (355)
Q Consensus 198 Dp~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L 277 (355)
...++|+...+.|+..+.|. +++.+..+|+++.+.|+|.=-. +.+-++.++..++ ++..+=+.+++
T Consensus 45 g~~~va~~l~~~G~~~f~va--------~~~Ea~~lr~~G~~~~ilvlg~-~~~~~~~~~~~~~-----i~~~v~s~~~l 110 (374)
T 4ecl_A 45 GMYEVTTYLEQIGVSSFAVA--------TIDEGIRLRKYGISSEILILGY-TSPSRAKELCKYE-----LTQTLIDYRYS 110 (374)
T ss_dssp CHHHHHHHHHHTTCCEEEES--------SHHHHHHHHHTTCCSEEEECSC-CCGGGHHHHHHTT-----CEEEECCHHHH
T ss_pred CHHHHHHHHHHCCCCEEEEE--------EHHHHHHHHhcCCCCCEEEEeC-CCHHHHHHHHHCC-----CEEEECCHHHH
Confidence 34689999989999987664 5778888888777778765322 3556676666543 23455566667
Q ss_pred HHHHHHHHHcCCcEEEEeCC-----------HHHHHHHhccCCCeEEEee
Q 018446 278 RYMTKICKLLGLTALVEVHD-----------EREMDRVLGIEGIELIGIN 316 (355)
Q Consensus 278 ~~L~~~A~~LGLeaLVEVH~-----------~eELerAl~l~ga~iIGIN 316 (355)
+.|.+. ...+.++++|.+ .+.++++..+++.++.||-
T Consensus 111 ~~l~~~--~~~~~v~lkvdtGm~R~G~~~e~~~~~~~i~~~~~l~l~Gl~ 158 (374)
T 4ecl_A 111 LLLNKQ--GYDIKAHIKIDTGMHRLGFSTEDKDKILAAFSLKHIKVAGIF 158 (374)
T ss_dssp HHHHTT--CCCEEEEEEEESSSCSSSEESSCHHHHHHHTTCTTEEEEEEE
T ss_pred HHHHhc--CCCccEEEEEcCCCCcCccCHHHHHHHHHHHhCCCceEEEEE
Confidence 666554 344667777755 3344444455577888884
No 492
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=51.46 E-value=51 Score=32.67 Aligned_cols=80 Identities=23% Similarity=0.260 Sum_probs=61.4
Q ss_pred EEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHH-HHhcCCHHHHHHHHHHHHHcCCcE
Q 018446 214 LSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLL-IAAVLPDLDIRYMTKICKLLGLTA 291 (355)
Q Consensus 214 ISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLL-IaaiL~~~~L~~L~~~A~~LGLea 291 (355)
+..+=||- . +++.+..+|+. +++||..-+-+.+.+++.++...| +|.|.+ +..+=+-.+...+..+|+..|+.
T Consensus 265 l~~iEeP~--~-~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~a~div~~d~~~~GGitea~kia~lA~~~gv~- 339 (445)
T 3vdg_A 265 LEYLEDPT--P-GLDGMAEVAAQ-APMPLATNMCVVAFDQLPAAVAKNSVQVVLSDHHYWGGLQRSRLLAGICDTFGLG- 339 (445)
T ss_dssp CSEEECCS--S-SHHHHHHHHHH-CSSCEEESSSCCSGGGHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCE-
T ss_pred HHeeeCCC--C-CHHHHHHHHhc-CCCCEEcCCcCCCHHHHHHHHHcCCCCEEeeCcceeCCHHHHHHHHHHHHHcCCE-
Confidence 66666773 2 79999999986 899999999999999998888777 566555 33333355777899999999997
Q ss_pred EEEeCCHH
Q 018446 292 LVEVHDER 299 (355)
Q Consensus 292 LVEVH~~e 299 (355)
|-+|+.-
T Consensus 340 -v~~h~~~ 346 (445)
T 3vdg_A 340 -LSMHSNS 346 (445)
T ss_dssp -EEECCCS
T ss_pred -EEEeCCc
Confidence 4567654
No 493
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=51.08 E-value=18 Score=34.42 Aligned_cols=119 Identities=13% Similarity=0.060 Sum_probs=80.4
Q ss_pred HHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHH---HHHHHHHHc-CceEEEEeccCCCCCCCHHHHHHHHhcCC
Q 018446 163 FIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPV---EIARSYEKG-GAACLSILTDEKYFKGSFENLEAVRSAGV 238 (355)
Q Consensus 163 F~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~---~iA~~Ye~~-GAaaISVLTD~~fF~GS~edL~~VR~a~v 238 (355)
...++++.. .....+..+. +..+++. ++++..++. +. . .-|+.+-.++++.+..+++. +
T Consensus 177 ~v~avr~a~--g~~~~l~vDa----------N~~~~~~~a~~~~~~l~~~~~i---~-~iEqP~~~~d~~~~~~l~~~-~ 239 (372)
T 3cyj_A 177 RVRAAREAI--GESVELMVDA----------NGAYTRKQALYWAGAFAREAGI---S-YLEEPVSSEDREGLRLLRDR-G 239 (372)
T ss_dssp HHHHHHHHH--CTTSEEEEEC----------TTCSCHHHHHHHHHHHHHHHCC---C-EEECSSCTTCHHHHHHHHHH-S
T ss_pred HHHHHHHHh--CCCCeEEEEC----------CCCCCHHHHHHHHHHHHhhcCC---c-EEECCCCcccHHHHHHHHHh-C
Confidence 344555432 1234566666 2234544 445555554 43 2 33566778899999999985 6
Q ss_pred C--CCeeccccccCHHHHHHHHHcCCcchHHHHhcCC-HHHHHHHHHHHHHcCCcEEEEeCCHHHH
Q 018446 239 K--CPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLP-DLDIRYMTKICKLLGLTALVEVHDEREM 301 (355)
Q Consensus 239 ~--lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~-~~~L~~L~~~A~~LGLeaLVEVH~~eEL 301 (355)
. +||..-+-+.+.+++.+. .-.+|.|.+=+.-.+ -.+...+.++|+..|+.+.+ |+.-+.
T Consensus 240 ~~~ipIa~dE~~~~~~~~~~~-~~a~d~i~ik~~~~GGit~~~~i~~~A~~~gi~~~~--~~~~~a 302 (372)
T 3cyj_A 240 PGGVAIAAGEYEWTLPQLHDL-AGCVDILQADVTRCGGITGLLRVDGICRGHQIPFSA--HCAPAV 302 (372)
T ss_dssp CTTCEEEECTTCCSHHHHHHH-HTTCSEEEECTTTTTHHHHHTTHHHHHHHHTCCEEE--CSCHHH
T ss_pred CCCCCEECCCCccCHHHHHHH-hCCCCEEecCchhhCCHHHHHHHHHHHHHcCCeecc--cchHHH
Confidence 6 799999999999999888 777888877444443 34667789999999999665 554443
No 494
>3sy8_A ROCR; TIM barrel phosphodiesterase-A, transcription regulator; HET: EPE; 2.50A {Pseudomonas aeruginosa}
Probab=50.56 E-value=13 Score=35.33 Aligned_cols=36 Identities=22% Similarity=0.469 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHcCCcEEEE-eCCHHHHHHHhccCCCeE
Q 018446 276 DIRYMTKICKLLGLTALVE-VHDEREMDRVLGIEGIEL 312 (355)
Q Consensus 276 ~L~~L~~~A~~LGLeaLVE-VH~~eELerAl~l~ga~i 312 (355)
-++.++.+|+++|+.++.| |.|+++++.+.++ |++.
T Consensus 334 ~v~~i~~~a~~l~~~vvaEGVEt~~~~~~l~~~-g~~~ 370 (400)
T 3sy8_A 334 VISSVVALAQALGISLVVEGVESDEQRVRLIEL-GCSI 370 (400)
T ss_dssp HHHHHHHHHHHHTCEEEECCCCCHHHHHHHHHH-TCCE
T ss_pred HHHHHHHHHHHcCCeEEEecCCcHHHHHHHHHc-CCCE
Confidence 3677899999999999999 9999999999887 8765
No 495
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=50.39 E-value=19 Score=33.16 Aligned_cols=88 Identities=10% Similarity=-0.011 Sum_probs=60.2
Q ss_pred HHHHHHHHHHcCceEEEEeccCC-CCCC---CHHHHHHHHhcCC-----CCCeeccccccCHHHHHHHHHcCCcchHHHH
Q 018446 199 PVEIARSYEKGGAACLSILTDEK-YFKG---SFENLEAVRSAGV-----KCPLLCKEFIVDAWQIYYARTKGADAVLLIA 269 (355)
Q Consensus 199 p~~iA~~Ye~~GAaaISVLTD~~-fF~G---S~edL~~VR~a~v-----~lPVLrKDFIIdpyQI~eAr~~GADAVLLIa 269 (355)
..+.++..+++|+++|-+.+-.. ||.| .-.....++++ + ++||+. +-+-.+..++..|+.-|-|++
T Consensus 79 l~~aa~~L~~~g~d~IviaCnta~~~~G~~~~~~~~~~l~~~-~~~~~~~iPv~~----~~~A~~~al~~~g~~rvgvlt 153 (273)
T 2xed_A 79 RERCVLEIADAAPEVILYACLVAVMVGGPGEHHRVESAVAEQ-LATGGSQALVRS----SAGALVEGLRALDAQRVALVT 153 (273)
T ss_dssp HHHHHHHHHTTCCSEEEECCHHHHHTTCTTHHHHHHHHHHHH-HHHTTCCCEEEE----HHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHhhcCCCEEEECCChHHHhcccchhHHHHHHHHHH-hhccCCCCCEec----HHHHHHHHHHHcCCCeEEEEc
Confidence 34567778889999998877553 4434 23335666664 6 899987 356677777888998888875
Q ss_pred hcCCHHHHH-HHHHHHHHcCCcEEE
Q 018446 270 AVLPDLDIR-YMTKICKLLGLTALV 293 (355)
Q Consensus 270 aiL~~~~L~-~L~~~A~~LGLeaLV 293 (355)
-... .+. .+.++....|++++.
T Consensus 154 -p~~~-~~~~~~~~~l~~~Gi~v~~ 176 (273)
T 2xed_A 154 -PYMR-PLAEKVVAYLEAEGFTISD 176 (273)
T ss_dssp -CSCH-HHHHHHHHHHHHTTCEEEE
T ss_pred -CChh-hhHHHHHHHHHHCCCEEec
Confidence 4544 333 455777789999754
No 496
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=50.05 E-value=12 Score=35.43 Aligned_cols=140 Identities=17% Similarity=0.195 Sum_probs=86.1
Q ss_pred CCccHHHHHHhhhhcCCCceEEeEeeecCCCCCCCCCCCCHHHHHHHHHHcCceEEEE-eccC-----CC--CCCCH-HH
Q 018446 159 PARDFIGALMAANQRTGLPALIAEVKKASPSRGILREDFDPVEIARSYEKGGAACLSI-LTDE-----KY--FKGSF-EN 229 (355)
Q Consensus 159 p~rdF~~aL~~~~~~~g~~aVIAEvKRaSPSkG~I~~~~Dp~~iA~~Ye~~GAaaISV-LTD~-----~f--F~GS~-ed 229 (355)
.++.|.+++.+ ....|..-+|..|.. .+.+-...+ -+|+..=.. |.|- +| |-|+. +-
T Consensus 119 ~t~~~v~~~~g------~~~~i~~tRKt~Pgl-------r~l~k~Av~-~GG~~nhR~gl~d~vlikdnHi~~ag~i~~a 184 (284)
T 1qpo_A 119 ATAAWVDAVRG------TKAKIRDTRKTLPGL-------RALQKYAVR-TGGGVNHRLGLGDAALIKDNHVAAAGSVVDA 184 (284)
T ss_dssp HHHHHHHHTTT------SSCEEECCSCCCTTC-------HHHHHHHHH-HTTCBCCCCSSSSSEEECHHHHHHHSSHHHH
T ss_pred HHHHHHHHhcC------CCcEEEEecccCCCc-------hHHHhhhhh-hcCcccccccchhhhcccHhHHHHcCCHHHH
Confidence 45667776652 236899999999942 222222233 344332110 1111 00 11443 45
Q ss_pred HHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHHHhcCCHHHHHHHHHHHHHcCCcEEEEeC---CHHHHHHHhc
Q 018446 230 LEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLIAAVLPDLDIRYMTKICKLLGLTALVEVH---DEREMDRVLG 306 (355)
Q Consensus 230 L~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLIaaiL~~~~L~~L~~~A~~LGLeaLVEVH---~~eELerAl~ 306 (355)
++.+|+.....||.. +.. +.-|+.||..+|||.|+|=- ++++++++.++.....+-.+.+|+. |++.+.....
T Consensus 185 v~~ar~~~~~~~I~V-ev~-t~eea~eal~aGaD~I~LDn--~~~~~~~~~v~~l~~~~~~v~ieaSGGIt~~~i~~~a~ 260 (284)
T 1qpo_A 185 LRAVRNAAPDLPCEV-EVD-SLEQLDAVLPEKPELILLDN--FAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATYAE 260 (284)
T ss_dssp HHHHHHHCTTSCEEE-EES-SHHHHHHHGGGCCSEEEEET--CCHHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHHH
T ss_pred HHHHHHhCCCCCEEE-EeC-CHHHHHHHHHcCCCEEEECC--CCHHHHHHHHHHhhccCCCeEEEEECCCCHHHHHHHHh
Confidence 666676432224333 222 56899999999999877633 7888999998888876667888885 5777777777
Q ss_pred cCCCeEEEeeC
Q 018446 307 IEGIELIGINN 317 (355)
Q Consensus 307 l~ga~iIGINN 317 (355)
. |+++|++-.
T Consensus 261 t-GVD~isvG~ 270 (284)
T 1qpo_A 261 T-GVDYLAVGA 270 (284)
T ss_dssp T-TCSEEECGG
T ss_pred c-CCCEEEECH
Confidence 5 899998754
No 497
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=49.91 E-value=60 Score=32.11 Aligned_cols=80 Identities=16% Similarity=0.250 Sum_probs=60.6
Q ss_pred EEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcC-CcchHH-HHhcCCHHHHHHHHHHHHHcCCcE
Q 018446 214 LSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKG-ADAVLL-IAAVLPDLDIRYMTKICKLLGLTA 291 (355)
Q Consensus 214 ISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~G-ADAVLL-IaaiL~~~~L~~L~~~A~~LGLea 291 (355)
+..+=||- . +++.+..+|+. +.+||..-+-+.+.+++.+....| +|.|.+ +...=+-.+...+..+|+..|+.
T Consensus 260 l~~iEeP~--~-~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~a~dii~~d~~~~GGitea~kia~lA~~~gv~- 334 (441)
T 3vc5_A 260 LEYLEDPT--P-GIDGMARVAAE-VPMPLATNMCVVTPEHLPAAVERRPIGVLLIDHHYWGGLVRSAHIATLCATFGIE- 334 (441)
T ss_dssp CSEEECCS--S-SHHHHHHHHTT-SSSCEEESSSCCSGGGHHHHHHHCCCSEEEECHHHHTSHHHHHHHHHHHHHTTCE-
T ss_pred HHHhhccC--C-CHHHHHHHHhc-CCCCEEeCCCCCCHHHHHHHHHhCCCCEEeechhhcCCHHHHHHHHHHHHHcCCE-
Confidence 66667773 2 89999999985 899999988889999998888776 555555 33333345677899999999997
Q ss_pred EEEeCCHH
Q 018446 292 LVEVHDER 299 (355)
Q Consensus 292 LVEVH~~e 299 (355)
|-+|+.-
T Consensus 335 -v~~h~~~ 341 (441)
T 3vc5_A 335 -LSMHSNS 341 (441)
T ss_dssp -EEECCCS
T ss_pred -EEecCCc
Confidence 4567653
No 498
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=49.87 E-value=60 Score=32.36 Aligned_cols=80 Identities=9% Similarity=0.187 Sum_probs=52.1
Q ss_pred CCC-eecc---cccc-CHHHHHH-HHHcCCcchHHHHhcCC--------------------HHHHHHHHHHHHHcC--Cc
Q 018446 239 KCP-LLCK---EFIV-DAWQIYY-ARTKGADAVLLIAAVLP--------------------DLDIRYMTKICKLLG--LT 290 (355)
Q Consensus 239 ~lP-VLrK---DFII-dpyQI~e-Ar~~GADAVLLIaaiL~--------------------~~~L~~L~~~A~~LG--Le 290 (355)
++| |+.| |+-. +--+|.+ +..+|||+|.++-.... +..+..+.++++.++ +.
T Consensus 268 ~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iP 347 (415)
T 3i65_A 268 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 347 (415)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCC
Confidence 689 7555 6532 1233333 45789999988754432 223455666677774 44
Q ss_pred EEE--EeCCHHHHHHHhccCCCeEEEeeCCC
Q 018446 291 ALV--EVHDEREMDRVLGIEGIELIGINNRN 319 (355)
Q Consensus 291 aLV--EVH~~eELerAl~l~ga~iIGINNRd 319 (355)
.+. -|+|.+++.+++.+ ||+.|.|-.-.
T Consensus 348 IIg~GGI~s~eDa~e~l~a-GAd~VqIgra~ 377 (415)
T 3i65_A 348 IIASGGIFSGLDALEKIEA-GASVCQLYSCL 377 (415)
T ss_dssp EEECSSCCSHHHHHHHHHH-TEEEEEESHHH
T ss_pred EEEECCCCCHHHHHHHHHc-CCCEEEEcHHH
Confidence 333 47999999999997 99999986543
No 499
>3llx_A Predicted amino acid aldolase or racemase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: LLP TRS; 1.50A {Idiomarina loihiensis}
Probab=49.86 E-value=27 Score=33.16 Aligned_cols=104 Identities=13% Similarity=0.174 Sum_probs=70.2
Q ss_pred HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHc---CCcchHHHHhcCCHHH
Q 018446 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTK---GADAVLLIAAVLPDLD 276 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~---GADAVLLIaaiL~~~~ 276 (355)
.++++...+.|+..+.|- +++....+|+++++-|+|.--++ +-++.++..+ +.+ ++..+=+.++
T Consensus 52 ~~va~~l~~~G~~~~~va--------~~~Ea~~l~~~Gi~~~il~~~~~--~~~~~~~~~l~~~~~~---l~~~Vds~~~ 118 (376)
T 3llx_A 52 LEAAGYLLDSKSAPATVS--------TLAEAEAYAKAGYTDLLYAVGIA--PAKLKRVAALRQQGIN---LHILLDNITQ 118 (376)
T ss_dssp HHHHHHHCSSTTSCEEES--------SHHHHHHHHHTTCCEEEEEEECC--GGGHHHHHHHHHTTCE---EEEEECSHHH
T ss_pred HHHHHHHHhcCCCcEEEe--------cHHHHHHHHhCCCCcEEEeCCCC--HHHHHHHHHhhccCCe---EEEEECCHHH
Confidence 478888888999887776 47777788887777777765544 5556555422 444 3455667788
Q ss_pred HHHHHHHHHHcC--CcEEEEeCCH--------HH--HHHHhc-cCCCeEEEeeC
Q 018446 277 IRYMTKICKLLG--LTALVEVHDE--------RE--MDRVLG-IEGIELIGINN 317 (355)
Q Consensus 277 L~~L~~~A~~LG--LeaLVEVH~~--------eE--LerAl~-l~ga~iIGINN 317 (355)
++.|.+.|.+.| +.++++|.+- +| +..+.. + +.++.||--
T Consensus 119 l~~l~~~a~~~~~~~~V~l~vdtG~~R~G~~~~~~~l~~~~~~l-~l~l~Gl~t 171 (376)
T 3llx_A 119 AQAVVDYAAEFGQDFSVFIEIDSDDHRGGIKPSDSKLLTIAKTL-GEHFTGLMT 171 (376)
T ss_dssp HHHHHHHHHHHTCCCEEEEEBCSSSSSSCBCTTCTHHHHHHHHH-GGGEEEEEC
T ss_pred HHHHHHHHHhcCCceEEEEEECCCCCCCCCCCchHHHHHHHHHh-CCEEeEEEE
Confidence 999999988776 7889998641 22 333322 2 567888754
No 500
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=49.51 E-value=36 Score=33.07 Aligned_cols=90 Identities=11% Similarity=0.072 Sum_probs=65.7
Q ss_pred HHHHHHHHHcCceEEEEeccCCCCCCCHHHHHHHHhcCCCCCeeccccccCHHHHHHHHHcCCcchHHH-HhcCCHHHHH
Q 018446 200 VEIARSYEKGGAACLSILTDEKYFKGSFENLEAVRSAGVKCPLLCKEFIVDAWQIYYARTKGADAVLLI-AAVLPDLDIR 278 (355)
Q Consensus 200 ~~iA~~Ye~~GAaaISVLTD~~fF~GS~edL~~VR~a~v~lPVLrKDFIIdpyQI~eAr~~GADAVLLI-aaiL~~~~L~ 278 (355)
..+++.++..| +..+ |+..-..+++.++.+|+. +++||..-+-+.+.+++.+....||--|+.+ +..=+-.+..
T Consensus 249 ~~~~~~l~~~~---l~~i-EqP~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~a~div~~d~~~GGit~~~ 323 (412)
T 4h1z_A 249 VALIKAMEPHG---LWFA-EAPVRTEDIDGLARVAAS-VSTAIAVGEEWRTVHDMVPRVARRALAIVQPEMGHKGITQFM 323 (412)
T ss_dssp HHHHHHHGGGC---EEEE-ECCSCTTCHHHHHHHHHH-CSSEEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHHHHHHH
T ss_pred HHHHHhhcccc---ccee-cCCCCccchHHHHHHHhh-cCCccccCCcccchHhHHHHHHcCCCCEEEecCCCCChHHHH
Confidence 45667777776 3334 555777899999999986 8999999999999999999888886444332 2111223556
Q ss_pred HHHHHHHHcCCcEEEE
Q 018446 279 YMTKICKLLGLTALVE 294 (355)
Q Consensus 279 ~L~~~A~~LGLeaLVE 294 (355)
.+..+|...|+.+.+-
T Consensus 324 kia~~A~~~gi~v~~h 339 (412)
T 4h1z_A 324 RIGAYAHVHHIKVIPH 339 (412)
T ss_dssp HHHHHHHHTTCEECCC
T ss_pred HHHHHHHHCCCcEEec
Confidence 7788999999986543
Done!