Your job contains 1 sequence.
>018448
MATGTATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE
KLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSF
NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW
LLARMVLQMRGTIRPGHKWDVMVDLFFYREPEETKQAEEEETAAIDYATAEYNTNLTSGD
QWPSQIADGGWAGGEVQKPIPGVPYFPEAAPAATVPLGGDGWDAVPAPPMAALQLLMFLL
PHHLLDGTNFILREFCFNHFKPLLLQLCVSLNFFMFCKELWLFSFFFWHSYSSRH
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018448
(355 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2193997 - symbol:P40 "AT1G72370" species:3702 ... 1030 5.3e-104 1
UNIPROTKB|Q8H3I3 - symbol:B1056G08.113 "Os07g0616600 prot... 1015 2.0e-102 1
TAIR|locus:2084988 - symbol:RPSAb "AT3G04770" species:370... 939 2.3e-94 1
UNIPROTKB|A8IB25 - symbol:CHLREDRAFT_126059 "40S ribosoma... 784 6.2e-78 1
UNIPROTKB|Q6P8D1 - symbol:rpsa "40S ribosomal protein SA"... 711 3.3e-70 1
FB|FBgn0003517 - symbol:sta "stubarista" species:7227 "Dr... 706 1.1e-69 1
UNIPROTKB|P50890 - symbol:RPSA "40S ribosomal protein SA"... 702 3.0e-69 1
ZFIN|ZDB-GENE-040426-811 - symbol:rpsa "ribosomal protein... 702 3.0e-69 1
UNIPROTKB|P26452 - symbol:RPSA "40S ribosomal protein SA"... 695 1.7e-68 1
UNIPROTKB|E2RJ06 - symbol:RPSA "Uncharacterized protein" ... 695 1.7e-68 1
UNIPROTKB|J9JHJ2 - symbol:RPSA "Uncharacterized protein" ... 695 1.7e-68 1
UNIPROTKB|C9J9K3 - symbol:RPSA "40S ribosomal protein SA"... 695 1.7e-68 1
UNIPROTKB|P08865 - symbol:RPSA "40S ribosomal protein SA"... 695 1.7e-68 1
UNIPROTKB|Q4GWZ2 - symbol:RPSA "40S ribosomal protein SA"... 695 1.7e-68 1
UNIPROTKB|A6YRY8 - symbol:RPSA "40S ribosomal protein SA"... 695 1.7e-68 1
UNIPROTKB|Q2L9X0 - symbol:RPSA "40S ribosomal protein SA"... 695 1.7e-68 1
MGI|MGI:105381 - symbol:Rpsa "ribosomal protein SA" speci... 695 1.7e-68 1
RGD|71026 - symbol:Rpsa "ribosomal protein SA" species:10... 695 1.7e-68 1
UNIPROTKB|A6NE09 - symbol:RPSAP58 "Protein RPSAP58" speci... 690 5.6e-68 1
UNIPROTKB|P38982 - symbol:Rpsa "40S ribosomal protein SA"... 689 7.2e-68 1
UNIPROTKB|Q01291 - symbol:rps-0 "40S ribosomal protein S0... 667 1.5e-65 1
ASPGD|ASPL0000040942 - symbol:AN3172 species:162425 "Emer... 654 3.7e-64 1
UNIPROTKB|Q5B8F8 - symbol:rps0 "40S ribosomal protein S0"... 654 3.7e-64 1
UNIPROTKB|Q7RBT0 - symbol:PY06059 "40S ribosomal protein ... 647 2.0e-63 1
GENEDB_PFALCIPARUM|PF10_0264 - symbol:PF10_0264 "40S ribo... 640 1.1e-62 1
UNIPROTKB|Q8IJD4 - symbol:PF10_0264 "40S ribosomal protei... 640 1.1e-62 1
ZFIN|ZDB-GENE-050417-382 - symbol:zgc:110181 "zgc:110181"... 640 1.1e-62 1
POMBASE|SPBC685.06 - symbol:rps001 "40S ribosomal protein... 630 1.3e-61 1
POMBASE|SPAPJ698.02c - symbol:rps002 "40S ribosomal prote... 627 2.7e-61 1
UNIPROTKB|I3LC48 - symbol:RPSA "40S ribosomal protein SA"... 623 7.1e-61 1
DICTYBASE|DDB_G0270316 - symbol:rpsA "40S ribosomal prote... 618 2.4e-60 1
UNIPROTKB|Q3YAI0 - symbol:LAMR1 "Ribosomal protein SA" sp... 602 1.2e-58 1
CGD|CAL0000370 - symbol:YST1 species:5476 "Candida albica... 593 1.1e-57 1
UNIPROTKB|O42817 - symbol:RPS0 "40S ribosomal protein S0"... 593 1.1e-57 1
SGD|S000004038 - symbol:RPS0B "Protein component of the s... 587 4.6e-57 1
SGD|S000003446 - symbol:RPS0A "Ribosomal 40S subunit prot... 582 1.6e-56 1
UNIPROTKB|Q75CQ9 - symbol:RPS0 "40S ribosomal protein S0"... 578 4.2e-56 1
WB|WBGene00004469 - symbol:rps-0 species:6239 "Caenorhabd... 573 1.4e-55 1
UNIPROTKB|P46769 - symbol:rps-0 "40S ribosomal protein SA... 573 1.4e-55 1
UNIPROTKB|F1SJR1 - symbol:F1SJR1 "Uncharacterized protein... 449 1.9e-42 1
UNIPROTKB|F1M8B9 - symbol:F1M8B9 "Uncharacterized protein... 442 1.1e-41 1
UNIPROTKB|P95993 - symbol:rps2 "30S ribosomal protein S2"... 418 3.7e-39 1
UNIPROTKB|F1S1E3 - symbol:F1S1E3 "Uncharacterized protein... 397 6.3e-37 1
UNIPROTKB|D4A495 - symbol:D4A495 "Uncharacterized protein... 301 3.9e-35 2
UNIPROTKB|J9P9K4 - symbol:J9P9K4 "Uncharacterized protein... 358 8.5e-33 1
UNIPROTKB|F1NKH1 - symbol:RPSA "40S ribosomal protein SA"... 347 1.3e-31 1
UNIPROTKB|Q8TT39 - symbol:rps2 "30S ribosomal protein S2"... 332 4.9e-30 1
UNIPROTKB|I3LIK7 - symbol:I3LIK7 "Uncharacterized protein... 307 2.2e-27 1
RGD|1560987 - symbol:RGD1560987 "similar to 40S ribosomal... 302 7.3e-27 1
UNIPROTKB|E2RGM2 - symbol:E2RGM2 "Uncharacterized protein... 297 2.5e-26 1
UNIPROTKB|F1LT21 - symbol:F1LT21 "Uncharacterized protein... 271 1.4e-23 1
UNIPROTKB|I3L6M5 - symbol:I3L6M5 "Uncharacterized protein... 268 2.9e-23 1
UNIPROTKB|C9JQR9 - symbol:RPSAP58 "Protein RPSAP58" speci... 226 8.3e-19 1
SGD|S000000996 - symbol:MRP4 "Mitochondrial ribosomal pro... 132 1.6e-12 2
ASPGD|ASPL0000014062 - symbol:AN4251 species:162425 "Emer... 127 2.8e-11 2
TIGR_CMR|BA_3965 - symbol:BA_3965 "ribosomal protein S2" ... 132 3.4e-11 2
CGD|CAL0001448 - symbol:orf19.5747 species:5476 "Candida ... 120 3.5e-10 2
TIGR_CMR|CHY_1787 - symbol:CHY_1787 "ribosomal protein S2... 104 1.5e-07 2
POMBASE|SPAC24C9.10c - symbol:mrp4 "mitochondrial ribosom... 96 1.6e-07 2
UNIPROTKB|G4NGF2 - symbol:MGG_04331 "37S ribosomal protei... 105 3.2e-07 2
TIGR_CMR|DET_0377 - symbol:DET_0377 "ribosomal protein S2... 101 1.1e-06 2
TIGR_CMR|APH_0397 - symbol:APH_0397 "ribosomal protein S2... 90 0.00018 2
TIGR_CMR|GSU_1921 - symbol:GSU_1921 "ribosomal protein S2... 80 0.00044 2
TIGR_CMR|SPO_1976 - symbol:SPO_1976 "ribosomal protein S2... 82 0.00044 2
>TAIR|locus:2193997 [details] [associations]
symbol:P40 "AT1G72370" species:3702 "Arabidopsis
thaliana" [GO:0000028 "ribosomal small subunit assembly"
evidence=IBA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA]
[GO:0000461 "endonucleolytic cleavage to generate mature 3'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA]
[GO:0003735 "structural constituent of ribosome"
evidence=IEA;ISS;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006407 "rRNA export from nucleus" evidence=IBA]
[GO:0006412 "translation" evidence=IEA;ISS;IBA] [GO:0015935 "small
ribosomal subunit" evidence=IEA;IDA] [GO:0030686 "90S preribosome"
evidence=IBA] [GO:0042256 "mature ribosome assembly" evidence=IDA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0006970 "response to osmotic stress" evidence=IEP] [GO:0009651
"response to salt stress" evidence=IEP;RCA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
[GO:0001510 "RNA methylation" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] [GO:0046686 "response to cadmium
ion" evidence=RCA] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 EnsemblPlants:AT1G72370.1 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005634
GO:GO:0009507 GO:GO:0006412 GO:GO:0009651 GO:GO:0003735
GO:GO:0000028 EMBL:AC016529 GO:GO:0030686 GO:GO:0000447
GO:GO:0022627 GO:GO:0006407 InterPro:IPR023591 SUPFAM:SSF52313
eggNOG:COG0052 GO:GO:0000461 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
EMBL:X69056 EMBL:U01955 EMBL:X89366 EMBL:Y10379 EMBL:AY054211
EMBL:AY058885 EMBL:AY065096 EMBL:AY079041 EMBL:AY114561
EMBL:AY136324 EMBL:BT000421 EMBL:AY087976 IPI:IPI00532111
PIR:F96747 PIR:S71247 RefSeq:NP_177381.1 UniGene:At.22576
UniGene:At.35111 UniGene:At.70162 ProteinModelPortal:Q08682
SMR:Q08682 IntAct:Q08682 STRING:Q08682 PaxDb:Q08682 PRIDE:Q08682
ProMEX:Q08682 GeneID:843569 KEGG:ath:AT1G72370 GeneFarm:5044
TAIR:At1g72370 HOGENOM:HOG000232073 InParanoid:Q08682 KO:K02998
OMA:ENVNFQM PhylomeDB:Q08682 ProtClustDB:CLSN2912707
Genevestigator:Q08682 HAMAP:MF_03015 Uniprot:Q08682
Length = 298
Score = 1030 (367.6 bits), Expect = 5.3e-104, P = 5.3e-104
Identities = 207/288 (71%), Positives = 223/288 (77%)
Query: 1 MATGTATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
MAT + + QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1 MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60
Query: 61 KLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSF 120
KLQMAARVIVAIENP DIIVQSARPYGQRAVLKFA+YT A+AIAGRHTPGTFTNQMQTSF
Sbjct: 61 KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120
Query: 121 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180
Query: 181 LLARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXX-XIDYATA---EYNTNL 236
LLARMVLQMRGTI G KWDVMVDLFFYR +Y EY +
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYG--M 238
Query: 237 TSGDQWPS-QIADGGWAGGEVQKPIPGVPYFPEAAPAATVPLGGDGWD 283
GDQW + QI D W G E Q PI P + +A P G GW+
Sbjct: 239 VGGDQWTTAQIPDAAWPG-EGQAPISAAPAAASWSDSAAAPADG-GWE 284
>UNIPROTKB|Q8H3I3 [details] [associations]
symbol:B1056G08.113 "Os07g0616600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0000028 "ribosomal small subunit
assembly" evidence=ISS] [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000461 "endonucleolytic cleavage to generate
mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0006407 "rRNA export from nucleus" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] [GO:0030686 "90S
preribosome" evidence=ISS] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00963
GO:GO:0005886 GO:GO:0005634 GO:GO:0009507 GO:GO:0006412
GO:GO:0009651 GO:GO:0003735 GO:GO:0000028 GO:GO:0030686
EMBL:AP008213 EMBL:CM000144 GO:GO:0000447 GO:GO:0042256
GO:GO:0022627 EMBL:AP004988 GO:GO:0006407 InterPro:IPR023591
SUPFAM:SSF52313 eggNOG:COG0052 GO:GO:0000461 PANTHER:PTHR11489
TIGRFAMs:TIGR01012 KO:K02998 HSSP:O29132 OMA:QAGADWT PDB:3IZ6
PDBsum:3IZ6 EMBL:AK058308 EMBL:AK102735 EMBL:AK103952 EMBL:AK105968
RefSeq:NP_001060277.1 UniGene:Os.8273 STRING:Q8H3I3
EnsemblPlants:LOC_Os07g42450.1 GeneID:4343909 KEGG:osa:4343909
ProtClustDB:CLSN2919813 Uniprot:Q8H3I3
Length = 305
Score = 1015 (362.4 bits), Expect = 2.0e-102, P = 2.0e-102
Identities = 208/287 (72%), Positives = 220/287 (76%)
Query: 1 MATGTATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
MA A R LSQ+E DIQMMLAA+VHLGTKNCDFQMERYV+KRR DGIYIINLGKTWE
Sbjct: 1 MAAEGGAAARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWE 60
Query: 61 KLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSF 120
KLQ+AARVIVAIENP DIIVQSARPYGQRAVLKFA+YT AHAIAGRHTPGTFTNQ+QTSF
Sbjct: 61 KLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF 120
Query: 121 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
+EPRLLILTDPRTDHQPIKE+ALGNIPTIAFCDTDSPMRYVDIGIPANNKGK SIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFW 180
Query: 181 LLARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXXI--DY-ATAEYNTNLT 237
LLARMVLQMRGTI PGHKWDVMVDLFFYR + DY A AEY
Sbjct: 181 LLARMVLQMRGTILPGHKWDVMVDLFFYRDPEEAKEQEEEEAALVAPDYGAVAEYAA--P 238
Query: 238 SGDQWPSQIADGGWAGGEVQKPIPGVPYFPEAA-PAATVPLGGDGWD 283
+ D W G W +P +P A AA P G GWD
Sbjct: 239 AADTW-----GGEWGTDAAAQPA-AIPAQAGADWTAAPAPAAG-GWD 278
>TAIR|locus:2084988 [details] [associations]
symbol:RPSAb "AT3G04770" species:3702 "Arabidopsis
thaliana" [GO:0000028 "ribosomal small subunit assembly"
evidence=IBA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA]
[GO:0000461 "endonucleolytic cleavage to generate mature 3'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA]
[GO:0003735 "structural constituent of ribosome"
evidence=IEA;ISS;IBA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006407 "rRNA export from nucleus" evidence=IBA] [GO:0006412
"translation" evidence=IEA;ISS;IBA] [GO:0030686 "90S preribosome"
evidence=IBA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0006606 "protein import into nucleus"
evidence=RCA] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00963
EnsemblPlants:AT3G04770.1 GO:GO:0009507 EMBL:CP002686 GO:GO:0016020
GO:GO:0006412 GO:GO:0003735 GO:GO:0000028 GO:GO:0030686
GO:GO:0000447 GO:GO:0022627 GO:GO:0006407 InterPro:IPR023591
SUPFAM:SSF52313 GO:GO:0000461 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
KO:K02998 IPI:IPI00522617 RefSeq:NP_850515.1 UniGene:At.10372
ProteinModelPortal:F4J4W3 SMR:F4J4W3 PRIDE:F4J4W3 DNASU:819637
GeneID:819637 KEGG:ath:AT3G04770 OMA:RWICFST Uniprot:F4J4W3
Length = 332
Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
Identities = 178/203 (87%), Positives = 191/203 (94%)
Query: 2 ATGTATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 61
A G ATA RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+K
Sbjct: 3 ANGVATAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDK 62
Query: 62 LQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFN 121
LQMAARVIVAIENP DIIVQSARPYGQRAVLKFA+YT +AIAGRHTPGTFTNQMQTSF+
Sbjct: 63 LQMAARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFS 122
Query: 122 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 181
EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWL
Sbjct: 123 EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWL 182
Query: 182 LARMVLQMRGTIRPGHKWDVMVD 204
LARMVLQMRGTI KWDVMV+
Sbjct: 183 LARMVLQMRGTILAAQKWDVMVN 205
>UNIPROTKB|A8IB25 [details] [associations]
symbol:CHLREDRAFT_126059 "40S ribosomal protein SA"
species:3055 "Chlamydomonas reinhardtii" [GO:0000028 "ribosomal
small subunit assembly" evidence=ISS] [GO:0000447 "endonucleolytic
cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000461 "endonucleolytic cleavage to generate
mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0006407 "rRNA export from nucleus" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] [GO:0030686 "90S
preribosome" evidence=ISS] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0005886 GO:GO:0005634 GO:GO:0009507
GO:GO:0006412 GO:GO:0009651 GO:GO:0003735 GO:GO:0000028
GO:GO:0030686 GO:GO:0000447 GO:GO:0042256 GO:GO:0022627
GO:GO:0006407 InterPro:IPR023591 SUPFAM:SSF52313 GO:GO:0000461
PANTHER:PTHR11489 TIGRFAMs:TIGR01012 KO:K02998 OMA:ENVNFQM
HAMAP:MF_03015 EMBL:DS496115 RefSeq:XP_001702485.1 UniGene:Cre.2557
ProteinModelPortal:A8IB25 SMR:A8IB25 STRING:A8IB25 PRIDE:A8IB25
EnsemblPlants:EDP06264 GeneID:5728044 KEGG:cre:CHLREDRAFT_126059
eggNOG:NOG251336 ProtClustDB:CLSN2923915 Uniprot:A8IB25
Length = 279
Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
Identities = 148/198 (74%), Positives = 170/198 (85%)
Query: 12 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVA 71
LSQKE DIQMMLAA+ HLGTKNC +QMERY+++RR DGIYIINL KT+EKLQMAAR+IVA
Sbjct: 3 LSQKEQDIQMMLAAQCHLGTKNCHYQMERYMYRRRQDGIYIINLEKTYEKLQMAARIIVA 62
Query: 72 IENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 131
IENP DI V SARPYGQRAV KFA+Y ++AGRHTPGTFTNQ+Q +F EPRLLILTDP
Sbjct: 63 IENPQDICVLSARPYGQRAVFKFAQYLGCKSMAGRHTPGTFTNQIQKAFEEPRLLILTDP 122
Query: 132 RTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 191
RTDHQP+KE++ NIPTIAFCDTDSP+ +VD+ IPANNKGKHSIG L++LLARMVL+MR
Sbjct: 123 RTDHQPVKESSYMNIPTIAFCDTDSPLTHVDVAIPANNKGKHSIGVLYFLLARMVLEMRD 182
Query: 192 TIRPGHKWDVMVDLFFYR 209
I + W V VDLFFYR
Sbjct: 183 QINVTNPWSVPVDLFFYR 200
>UNIPROTKB|Q6P8D1 [details] [associations]
symbol:rpsa "40S ribosomal protein SA" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000028 "ribosomal small
subunit assembly" evidence=ISS] [GO:0000447 "endonucleolytic
cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000461 "endonucleolytic cleavage to generate
mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0006407 "rRNA export from nucleus" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] [GO:0030686 "90S
preribosome" evidence=ISS] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0005886 GO:GO:0005634 GO:GO:0006412
GO:GO:0003735 GO:GO:0000028 GO:GO:0030686 GO:GO:0000447
GO:GO:0022627 GO:GO:0006407 InterPro:IPR023591 SUPFAM:SSF52313
eggNOG:COG0052 GO:GO:0000461 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
HOGENOM:HOG000232073 KO:K02998 HAMAP:MF_03015
GeneTree:ENSGT00390000015036 HSSP:O29132 CTD:3921 OrthoDB:EOG40ZQZ6
HAMAP:MF_03016 EMBL:CR942700 EMBL:BC061298 EMBL:BC168799
RefSeq:NP_989068.1 UniGene:Str.6703 ProteinModelPortal:Q6P8D1
SMR:Q6P8D1 STRING:Q6P8D1 PRIDE:Q6P8D1 Ensembl:ENSXETT00000057070
GeneID:394665 KEGG:xtr:394665 Xenbase:XB-GENE-972235
InParanoid:Q6P8D1 OMA:XIEKEEQ Bgee:Q6P8D1 Uniprot:Q6P8D1
Length = 306
Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
Identities = 148/275 (53%), Positives = 182/275 (66%)
Query: 12 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVA 71
L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVA
Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 67
Query: 72 IENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 131
IENP D+ V S+R GQRAVLKFA + A IAGR TPGTFTNQ+Q +F EPRLL++TDP
Sbjct: 68 IENPADVCVISSRNTGQRAVLKFASASGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDP 127
Query: 132 RTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 191
R DHQP+ EA+ NIPTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRG
Sbjct: 128 RADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRG 187
Query: 192 TIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXXIDYATAEYNTNLTSG-DQWP-SQIADG 249
TI H W+VM DL+FYR EY T+ ++P +++AD
Sbjct: 188 TISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAT-TKEEYQGEWTAPVAEFPQAEVAD- 245
Query: 250 GWAGGEVQKPIPGVPYFPEAAPA--ATVPLGGDGW 282
W+ G VQ P + FP P A P D W
Sbjct: 246 -WSEG-VQVPSVPIQQFPAERPEIPAAKPAAED-W 277
>FB|FBgn0003517 [details] [associations]
symbol:sta "stubarista" species:7227 "Drosophila
melanogaster" [GO:0003735 "structural constituent of ribosome"
evidence=ISS;IBA;IDA;NAS] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS;IBA;NAS] [GO:0006412 "translation"
evidence=ISS;IBA;NAS] [GO:0043022 "ribosome binding" evidence=IPI]
[GO:0005840 "ribosome" evidence=NAS;IDA] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0000022 "mitotic spindle elongation"
evidence=IMP] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0006407 "rRNA export from nucleus" evidence=IBA]
[GO:0000028 "ribosomal small subunit assembly" evidence=IBA]
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA] [GO:0030686 "90S
preribosome" evidence=IBA] [GO:0000461 "endonucleolytic cleavage to
generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IBA] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0007275 GO:GO:0005634 GO:GO:0005875
GO:GO:0005811 GO:GO:0006412 EMBL:AE014298 GO:GO:0043022
GO:GO:0003735 GO:GO:0000022 GO:GO:0000028 GO:GO:0030686
GO:GO:0000447 GO:GO:0022627 ChiTaRS:EMD GO:GO:0006407 EMBL:AL031027
InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052 GO:GO:0000461
PANTHER:PTHR11489 TIGRFAMs:TIGR01012 KO:K02998 OMA:ENVNFQM
HAMAP:MF_03015 GeneTree:ENSGT00390000015036 EMBL:M90422
EMBL:AY118899 EMBL:BT029094 EMBL:M77133 PIR:T13602
RefSeq:NP_476750.1 RefSeq:NP_726744.1 RefSeq:NP_726745.2
UniGene:Dm.33985 UniGene:Dm.4723 ProteinModelPortal:P38979
SMR:P38979 DIP:DIP-17178N IntAct:P38979 MINT:MINT-1635735
STRING:P38979 PaxDb:P38979 PRIDE:P38979 EnsemblMetazoa:FBtr0070291
GeneID:31106 KEGG:dme:Dmel_CG14792 CTD:104044 FlyBase:FBgn0003517
InParanoid:P38979 OrthoDB:EOG4ZCRMJ PhylomeDB:P38979
GenomeRNAi:31106 NextBio:771969 Bgee:P38979 GermOnline:CG14792
Uniprot:P38979
Length = 313
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 134/198 (67%), Positives = 158/198 (79%)
Query: 12 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVA 71
LS KE DI ML A HLG++N +FQME+YV+KRR DG+ I+NLGKTWEKLQ+AAR IVA
Sbjct: 51 LSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIVA 110
Query: 72 IENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 131
I+NP DI V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP
Sbjct: 111 IDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDP 170
Query: 132 RTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 191
TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK HSIG ++WLLAR VL++RG
Sbjct: 171 NTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRG 230
Query: 192 TIRPGHKWDVMVDLFFYR 209
TI +W V+VDLFFYR
Sbjct: 231 TISRSVEWPVVVDLFFYR 248
>UNIPROTKB|P50890 [details] [associations]
symbol:RPSA "40S ribosomal protein SA" species:9031 "Gallus
gallus" [GO:0000028 "ribosomal small subunit assembly"
evidence=IBA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA]
[GO:0000461 "endonucleolytic cleavage to generate mature 3'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA]
[GO:0003735 "structural constituent of ribosome" evidence=IBA]
[GO:0006407 "rRNA export from nucleus" evidence=IBA] [GO:0006412
"translation" evidence=IBA] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IBA] [GO:0030686 "90S preribosome" evidence=IBA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0043236 "laminin binding" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0005886 GO:GO:0005634 GO:GO:0006412 GO:GO:0043236
GO:GO:0003735 GO:GO:0000028 GO:GO:0030686 GO:GO:0000447
GO:GO:0022627 GO:GO:0006407 InterPro:IPR023591 SUPFAM:SSF52313
eggNOG:COG0052 GO:GO:0000461 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
HOGENOM:HOG000232073 KO:K02998 OMA:ENVNFQM HAMAP:MF_03015
GeneTree:ENSGT00390000015036 CTD:3921 HOVERGEN:HBG054466
OrthoDB:EOG40ZQZ6 HAMAP:MF_03016 EMBL:X94368 IPI:IPI00590239
RefSeq:NP_001007824.1 UniGene:Gga.34355 ProteinModelPortal:P50890
SMR:P50890 IntAct:P50890 STRING:P50890 PRIDE:P50890
Ensembl:ENSGALT00000019495 GeneID:395181 KEGG:gga:395181
InParanoid:P50890 NextBio:20815271 ArrayExpress:P50890
Uniprot:P50890
Length = 296
Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
Identities = 143/259 (55%), Positives = 174/259 (67%)
Query: 12 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVA 71
L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVA
Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 67
Query: 72 IENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 131
IENP D+ V S+R GQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDP
Sbjct: 68 IENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDP 127
Query: 132 RTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 191
R DHQP+ EA+ NIPTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRG
Sbjct: 128 RADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRG 187
Query: 192 TIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXXIDYATAEYNTNLTS-GDQW--PSQIAD 248
TI H W+VM DL+FYR E+ T T+ ++ P Q
Sbjct: 188 TISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKA-VTKEEFQTEWTAPAPEFTAPPQPEV 246
Query: 249 GGWAGGEVQKPIPGVPYFP 267
W+ G VQ P + FP
Sbjct: 247 ADWSEG-VQVPSVPIQQFP 264
>ZFIN|ZDB-GENE-040426-811 [details] [associations]
symbol:rpsa "ribosomal protein SA" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA;IBA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;IBA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IBA]
[GO:0000461 "endonucleolytic cleavage to generate mature 3'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA]
[GO:0006407 "rRNA export from nucleus" evidence=IBA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IBA] [GO:0000028 "ribosomal small subunit
assembly" evidence=IBA] [GO:0030686 "90S preribosome" evidence=IBA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 ZFIN:ZDB-GENE-040426-811 GO:GO:0005886
GO:GO:0005634 GO:GO:0006412 GO:GO:0003735 GO:GO:0000028
GO:GO:0030686 GO:GO:0000447 GO:GO:0022627 GO:GO:0006407
InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052 GO:GO:0000461
PANTHER:PTHR11489 TIGRFAMs:TIGR01012 HOGENOM:HOG000232073 KO:K02998
OMA:ENVNFQM HAMAP:MF_03015 GeneTree:ENSGT00390000015036 HSSP:O29132
CTD:3921 HAMAP:MF_03016 EMBL:AY391434 EMBL:BC044504 EMBL:BC062859
IPI:IPI00508284 RefSeq:NP_957346.1 UniGene:Dr.75127
ProteinModelPortal:Q803F6 SMR:Q803F6 STRING:Q803F6 PRIDE:Q803F6
Ensembl:ENSDART00000135945 GeneID:394027 KEGG:dre:394027
InParanoid:Q803F6 NextBio:20814990 ArrayExpress:Q803F6 Bgee:Q803F6
Uniprot:Q803F6
Length = 308
Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
Identities = 146/269 (54%), Positives = 176/269 (65%)
Query: 12 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVA 71
L KE D+ LAA HLG N DFQME+YV+KR++DG+YIINL KTWEKL +AAR IVA
Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYVYKRKSDGVYIINLKKTWEKLLLAARAIVA 67
Query: 72 IENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 131
IENP D+ V S+R GQRAVLKFA T + AGR TPGTFTNQ+Q +F EPRLLI+TDP
Sbjct: 68 IENPADVCVISSRNTGQRAVLKFASATGSTTFAGRFTPGTFTNQIQAAFREPRLLIVTDP 127
Query: 132 RTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 191
R DHQP+ EA+ NIPTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRG
Sbjct: 128 RADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGPHSVGLMWWMLAREVLRMRG 187
Query: 192 TIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXXIDYATAEYNTNLTSG--DQWPSQIADG 249
TI H W+VM DL+FYR E+ T+ D ++AD
Sbjct: 188 TISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKA-VGKEEFQGEWTAPVPDFNQPEVAD- 245
Query: 250 GWAGGEVQKPIPGVPYFPEA--APAATVP 276
W+ G VQ P + FP AP P
Sbjct: 246 -WSEG-VQVPSVPIQQFPAGIEAPGKPAP 272
>UNIPROTKB|P26452 [details] [associations]
symbol:RPSA "40S ribosomal protein SA" species:9913 "Bos
taurus" [GO:0016020 "membrane" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043236 "laminin binding" evidence=ISS] [GO:0030686 "90S
preribosome" evidence=ISS] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0006407 "rRNA export from nucleus" evidence=ISS] [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0000461
"endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=ISS] [GO:0000028 "ribosomal small subunit
assembly" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0005886 GO:GO:0005634 GO:GO:0006412 GO:GO:0043236
GO:GO:0003735 GO:GO:0000028 GO:GO:0030686 GO:GO:0000447
GO:GO:0022627 GO:GO:0006407 InterPro:IPR023591 SUPFAM:SSF52313
eggNOG:COG0052 GO:GO:0000461 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
HOGENOM:HOG000232073 KO:K02998 OMA:ENVNFQM HAMAP:MF_03015
GeneTree:ENSGT00390000015036 EMBL:M64923 EMBL:BC102490
IPI:IPI00709865 PIR:A38464 RefSeq:NP_776804.1 UniGene:Bt.49711
ProteinModelPortal:P26452 SMR:P26452 STRING:P26452 PRIDE:P26452
Ensembl:ENSBTAT00000012866 GeneID:281898 KEGG:bta:281898 CTD:3921
HOVERGEN:HBG054466 InParanoid:P26452 OrthoDB:EOG40ZQZ6
NextBio:20805794 ArrayExpress:P26452 HAMAP:MF_03016 Uniprot:P26452
Length = 295
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 130/198 (65%), Positives = 156/198 (78%)
Query: 12 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVA 71
L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVA
Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 67
Query: 72 IENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 131
IENP D+ V S+R GQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDP
Sbjct: 68 IENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDP 127
Query: 132 RTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 191
R DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRG
Sbjct: 128 RADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRG 187
Query: 192 TIRPGHKWDVMVDLFFYR 209
TI H W+VM DL+FYR
Sbjct: 188 TISREHPWEVMPDLYFYR 205
>UNIPROTKB|E2RJ06 [details] [associations]
symbol:RPSA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0006412 GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591
SUPFAM:SSF52313 PANTHER:PTHR11489 TIGRFAMs:TIGR01012 OMA:ENVNFQM
GeneTree:ENSGT00390000015036 EMBL:AAEX03013498 UniGene:Cfa.27618
Ensembl:ENSCAFT00000008199 NextBio:20852580 Uniprot:E2RJ06
Length = 314
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 130/198 (65%), Positives = 156/198 (78%)
Query: 12 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVA 71
L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVA
Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 67
Query: 72 IENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 131
IENP D+ V S+R GQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDP
Sbjct: 68 IENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDP 127
Query: 132 RTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 191
R DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRG
Sbjct: 128 RADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRG 187
Query: 192 TIRPGHKWDVMVDLFFYR 209
TI H W+VM DL+FYR
Sbjct: 188 TISREHPWEVMPDLYFYR 205
>UNIPROTKB|J9JHJ2 [details] [associations]
symbol:RPSA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0006412 GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591
SUPFAM:SSF52313 PANTHER:PTHR11489 TIGRFAMs:TIGR01012 KO:K02998
GeneTree:ENSGT00390000015036 CTD:3921 EMBL:AAEX03013498
RefSeq:NP_001239159.1 ProteinModelPortal:J9JHJ2
Ensembl:ENSCAFT00000048108 GeneID:477029 KEGG:cfa:477029
Uniprot:J9JHJ2
Length = 295
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 130/198 (65%), Positives = 156/198 (78%)
Query: 12 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVA 71
L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVA
Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 67
Query: 72 IENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 131
IENP D+ V S+R GQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDP
Sbjct: 68 IENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDP 127
Query: 132 RTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 191
R DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRG
Sbjct: 128 RADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRG 187
Query: 192 TIRPGHKWDVMVDLFFYR 209
TI H W+VM DL+FYR
Sbjct: 188 TISREHPWEVMPDLYFYR 205
>UNIPROTKB|C9J9K3 [details] [associations]
symbol:RPSA "40S ribosomal protein SA" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] InterPro:IPR001865
InterPro:IPR005707 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 GO:GO:0006412 GO:GO:0003735
GO:GO:0015935 InterPro:IPR023591 SUPFAM:SSF52313 PANTHER:PTHR11489
TIGRFAMs:TIGR01012 HOGENOM:HOG000232073 HGNC:HGNC:6502 ChiTaRS:RPSA
EMBL:AC099332 IPI:IPI00927101 ProteinModelPortal:C9J9K3 SMR:C9J9K3
STRING:C9J9K3 PRIDE:C9J9K3 Ensembl:ENST00000458478
ArrayExpress:C9J9K3 Bgee:C9J9K3 Uniprot:C9J9K3
Length = 264
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 130/198 (65%), Positives = 156/198 (78%)
Query: 12 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVA 71
L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVA
Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 67
Query: 72 IENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 131
IENP D+ V S+R GQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDP
Sbjct: 68 IENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDP 127
Query: 132 RTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 191
R DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRG
Sbjct: 128 RADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRG 187
Query: 192 TIRPGHKWDVMVDLFFYR 209
TI H W+VM DL+FYR
Sbjct: 188 TISREHPWEVMPDLYFYR 205
>UNIPROTKB|P08865 [details] [associations]
symbol:RPSA "40S ribosomal protein SA" species:9606 "Homo
sapiens" [GO:0000028 "ribosomal small subunit assembly"
evidence=IBA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA]
[GO:0000461 "endonucleolytic cleavage to generate mature 3'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA]
[GO:0003735 "structural constituent of ribosome" evidence=IBA]
[GO:0006407 "rRNA export from nucleus" evidence=IBA] [GO:0030686
"90S preribosome" evidence=IBA] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA;TAS] [GO:0043022 "ribosome
binding" evidence=IPI] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0006412 "translation" evidence=IC;TAS]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0006414 "translational elongation" evidence=TAS] [GO:0006415
"translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0005886 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0000184
GO:GO:0006413 GO:GO:0007155 GO:GO:0043022 GO:GO:0003735
GO:GO:0000028 GO:GO:0030686 GO:GO:0000447 GO:GO:0006415
GO:GO:0006414 GO:GO:0022627 Reactome:REACT_1762 GO:GO:0006614
GO:GO:0019083 GO:GO:0006407 InterPro:IPR023591 SUPFAM:SSF52313
eggNOG:COG0052 GO:GO:0000461 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
KO:K02998 HAMAP:MF_03015 CTD:3921 HOVERGEN:HBG054466
OrthoDB:EOG40ZQZ6 HAMAP:MF_03016 EMBL:J03799 EMBL:X15005
EMBL:S37431 EMBL:U43901 EMBL:AF503367 EMBL:BT007219 EMBL:BC005391
EMBL:BC008867 EMBL:BC010418 EMBL:BC013827 EMBL:BC034537
EMBL:BC050688 EMBL:BC053370 EMBL:BC062714 EMBL:BC066941
EMBL:BC068062 EMBL:BC070263 EMBL:BC071693 EMBL:BC071968
EMBL:BC071969 EMBL:BC071970 EMBL:BC073863 EMBL:BC107567 EMBL:X61156
EMBL:U36484 EMBL:M14199 EMBL:AB007146 IPI:IPI00553164 PIR:A31233
RefSeq:NP_001012321.1 RefSeq:NP_002286.2 UniGene:Hs.449909 PDB:3BCH
PDBsum:3BCH ProteinModelPortal:P08865 SMR:P08865 IntAct:P08865
MINT:MINT-1402850 STRING:P08865 PhosphoSite:P08865 DMDM:125969
PaxDb:P08865 PRIDE:P08865 DNASU:3921 Ensembl:ENST00000301821
Ensembl:ENST00000443003 GeneID:3921 KEGG:hsa:3921 UCSC:uc003cjp.3
GeneCards:GC03P039448 HGNC:HGNC:6502 HPA:CAB009561 MIM:150370
neXtProt:NX_P08865 PharmGKB:PA30287 InParanoid:P08865
PhylomeDB:P08865 ChEMBL:CHEMBL6119 ChiTaRS:RPSA
EvolutionaryTrace:P08865 GenomeRNAi:3921 NextBio:15405
ArrayExpress:P08865 Bgee:P08865 Genevestigator:P08865
GermOnline:ENSG00000168028 Uniprot:P08865
Length = 295
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 130/198 (65%), Positives = 156/198 (78%)
Query: 12 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVA 71
L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVA
Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 67
Query: 72 IENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 131
IENP D+ V S+R GQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDP
Sbjct: 68 IENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDP 127
Query: 132 RTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 191
R DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRG
Sbjct: 128 RADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRG 187
Query: 192 TIRPGHKWDVMVDLFFYR 209
TI H W+VM DL+FYR
Sbjct: 188 TISREHPWEVMPDLYFYR 205
>UNIPROTKB|Q4GWZ2 [details] [associations]
symbol:RPSA "40S ribosomal protein SA" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0005886 GO:GO:0005634 GO:GO:0006412 GO:GO:0003735
GO:GO:0015935 InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052
PANTHER:PTHR11489 TIGRFAMs:TIGR01012 HOGENOM:HOG000232073 KO:K02998
HAMAP:MF_03015 CTD:3921 HOVERGEN:HBG054466 OrthoDB:EOG40ZQZ6
HAMAP:MF_03016 EMBL:AM050292 RefSeq:NP_001032223.1
UniGene:Ssc.11095 ProteinModelPortal:Q4GWZ2 SMR:Q4GWZ2
STRING:Q4GWZ2 GeneID:641351 KEGG:ssc:641351 ArrayExpress:Q4GWZ2
Uniprot:Q4GWZ2
Length = 295
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 130/198 (65%), Positives = 156/198 (78%)
Query: 12 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVA 71
L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVA
Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 67
Query: 72 IENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 131
IENP D+ V S+R GQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDP
Sbjct: 68 IENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDP 127
Query: 132 RTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 191
R DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRG
Sbjct: 128 RADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRG 187
Query: 192 TIRPGHKWDVMVDLFFYR 209
TI H W+VM DL+FYR
Sbjct: 188 TISREHPWEVMPDLYFYR 205
>UNIPROTKB|A6YRY8 [details] [associations]
symbol:RPSA "40S ribosomal protein SA" species:9940 "Ovis
aries" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=ISS] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006412 GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591
SUPFAM:SSF52313 PANTHER:PTHR11489 TIGRFAMs:TIGR01012 HAMAP:MF_03015
HOVERGEN:HBG054466 HAMAP:MF_03016 EMBL:EF649775 EMBL:EF222474
RefSeq:NP_001098733.1 UniGene:Oar.22928 ProteinModelPortal:A6YRY8
SMR:A6YRY8 GeneID:100125628 Uniprot:A6YRY8
Length = 295
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 130/198 (65%), Positives = 156/198 (78%)
Query: 12 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVA 71
L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVA
Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 67
Query: 72 IENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 131
IENP D+ V S+R GQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDP
Sbjct: 68 IENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDP 127
Query: 132 RTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 191
R DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRG
Sbjct: 128 RADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRG 187
Query: 192 TIRPGHKWDVMVDLFFYR 209
TI H W+VM DL+FYR
Sbjct: 188 TISREHPWEVMPDLYFYR 205
>UNIPROTKB|Q2L9X0 [details] [associations]
symbol:RPSA "40S ribosomal protein SA" species:9534
"Chlorocebus aethiops" [GO:0005886 "plasma membrane" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0005886 GO:GO:0005634 GO:GO:0006412 GO:GO:0003735
GO:GO:0015935 InterPro:IPR023591 SUPFAM:SSF52313 PANTHER:PTHR11489
TIGRFAMs:TIGR01012 HAMAP:MF_03015 HOVERGEN:HBG054466 HAMAP:MF_03016
EMBL:DQ343296 ProteinModelPortal:Q2L9X0 SMR:Q2L9X0 PRIDE:Q2L9X0
Uniprot:Q2L9X0
Length = 295
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 130/198 (65%), Positives = 156/198 (78%)
Query: 12 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVA 71
L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVA
Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 67
Query: 72 IENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 131
IENP D+ V S+R GQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDP
Sbjct: 68 IENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDP 127
Query: 132 RTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 191
R DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRG
Sbjct: 128 RADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRG 187
Query: 192 TIRPGHKWDVMVDLFFYR 209
TI H W+VM DL+FYR
Sbjct: 188 TISREHPWEVMPDLYFYR 205
>MGI|MGI:105381 [details] [associations]
symbol:Rpsa "ribosomal protein SA" species:10090 "Mus
musculus" [GO:0000028 "ribosomal small subunit assembly"
evidence=IBA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA]
[GO:0000461 "endonucleolytic cleavage to generate mature 3'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA]
[GO:0003735 "structural constituent of ribosome" evidence=IBA]
[GO:0005604 "basement membrane" evidence=ISO] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0006407 "rRNA export from
nucleus" evidence=IBA] [GO:0006412 "translation" evidence=IBA]
[GO:0015935 "small ribosomal subunit" evidence=IDA] [GO:0016020
"membrane" evidence=ISO] [GO:0016337 "cell-cell adhesion"
evidence=ISO] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO;IBA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0030686 "90S preribosome" evidence=IBA]
[GO:0031012 "extracellular matrix" evidence=ISO] [GO:0043022
"ribosome binding" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0043236 "laminin binding" evidence=IDA]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
MGI:MGI:105381 GO:GO:0005886 GO:GO:0005634 GO:GO:0006412
GO:GO:0043236 GO:GO:0003735 GO:GO:0000028 GO:GO:0030686
GO:GO:0000447 GO:GO:0022627 EMBL:DQ360291 EMBL:DQ360292
GO:GO:0006407 InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052
GO:GO:0000461 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
HOGENOM:HOG000232073 KO:K02998 OMA:ENVNFQM HAMAP:MF_03015
GeneTree:ENSGT00390000015036 CTD:3921 HOVERGEN:HBG054466
OrthoDB:EOG40ZQZ6 HAMAP:MF_03016 ChiTaRS:RPSA EMBL:J02870
EMBL:X06406 EMBL:AF140348 EMBL:AK010423 EMBL:AK010985 EMBL:AK011041
EMBL:AK011043 EMBL:AK075778 EMBL:AK075790 EMBL:AK082935
EMBL:AK088954 EMBL:AK134224 EMBL:AK135488 EMBL:AK160551
EMBL:AK160625 EMBL:AK165219 EMBL:AK166697 EMBL:AK166874
EMBL:AK167132 EMBL:BC003829 EMBL:BC037195 EMBL:BC055886
EMBL:BC081461 EMBL:BC084677 EMBL:BC092041 EMBL:BC094902
EMBL:BC099601 EMBL:BC110285 IPI:IPI00123604 PIR:A29395
RefSeq:NP_035159.3 RefSeq:XP_003086186.1 UniGene:Mm.311972
UniGene:Mm.391708 UniGene:Mm.4071 ProteinModelPortal:P14206
SMR:P14206 IntAct:P14206 STRING:P14206 PhosphoSite:P14206
REPRODUCTION-2DPAGE:IPI00123604 REPRODUCTION-2DPAGE:P14206
SWISS-2DPAGE:P14206 PaxDb:P14206 PRIDE:P14206
Ensembl:ENSMUST00000035105 GeneID:100505031 GeneID:16785
KEGG:mmu:100505031 KEGG:mmu:16785 UCSC:uc009scd.2 InParanoid:P14206
ChEMBL:CHEMBL1075301 NextBio:290650 Bgee:P14206 CleanEx:MM_RPSA
Genevestigator:P14206 GermOnline:ENSMUSG00000032518 Uniprot:P14206
Length = 295
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 130/198 (65%), Positives = 156/198 (78%)
Query: 12 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVA 71
L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVA
Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 67
Query: 72 IENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 131
IENP D+ V S+R GQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDP
Sbjct: 68 IENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDP 127
Query: 132 RTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 191
R DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRG
Sbjct: 128 RADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRG 187
Query: 192 TIRPGHKWDVMVDLFFYR 209
TI H W+VM DL+FYR
Sbjct: 188 TISREHPWEVMPDLYFYR 205
>RGD|71026 [details] [associations]
symbol:Rpsa "ribosomal protein SA" species:10116 "Rattus
norvegicus" [GO:0000028 "ribosomal small subunit assembly"
evidence=IBA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA]
[GO:0000461 "endonucleolytic cleavage to generate mature 3'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IBA]
[GO:0003735 "structural constituent of ribosome" evidence=IBA]
[GO:0005055 "laminin receptor activity" evidence=TAS] [GO:0005198
"structural molecule activity" evidence=IC] [GO:0005604 "basement
membrane" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=ISO;ISS]
[GO:0006407 "rRNA export from nucleus" evidence=IBA] [GO:0006412
"translation" evidence=IBA] [GO:0015935 "small ribosomal subunit"
evidence=ISO] [GO:0016020 "membrane" evidence=IDA] [GO:0016337
"cell-cell adhesion" evidence=IDA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISO;IDA] [GO:0030686 "90S preribosome"
evidence=IBA] [GO:0030855 "epithelial cell differentiation"
evidence=IEP] [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0043022 "ribosome binding" evidence=ISO] [GO:0043025 "neuronal
cell body" evidence=IDA] [GO:0043236 "laminin binding" evidence=ISO]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
RGD:71026 GO:GO:0005886 GO:GO:0005634 GO:GO:0006412 GO:GO:0043025
GO:GO:0003735 GO:GO:0016337 GO:GO:0005604 GO:GO:0000028
GO:GO:0030855 GO:GO:0005055 GO:GO:0030686 GO:GO:0000447
GO:GO:0022627 GO:GO:0006407 InterPro:IPR023591 SUPFAM:SSF52313
eggNOG:COG0052 GO:GO:0000461 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
HOGENOM:HOG000232073 KO:K02998 OMA:ENVNFQM HAMAP:MF_03015
GeneTree:ENSGT00390000015036 CTD:3921 HOVERGEN:HBG054466
OrthoDB:EOG40ZQZ6 HAMAP:MF_03016 EMBL:D25224 EMBL:FJ386454
EMBL:BC060578 EMBL:U04942 EMBL:M27798 IPI:IPI00215107 PIR:S42405
RefSeq:NP_058834.1 UniGene:Rn.121972 UniGene:Rn.161973
UniGene:Rn.999 ProteinModelPortal:P38983 SMR:P38983 IntAct:P38983
MINT:MINT-4568881 STRING:P38983 PhosphoSite:P38983 PRIDE:P38983
DNASU:29236 Ensembl:ENSRNOT00000025225 GeneID:29236 KEGG:rno:29236
UCSC:RGD:71026 InParanoid:P38983 NextBio:608498
Genevestigator:P38983 GermOnline:ENSRNOG00000018645 Uniprot:P38983
Length = 295
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 130/198 (65%), Positives = 156/198 (78%)
Query: 12 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVA 71
L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVA
Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 67
Query: 72 IENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 131
IENP D+ V S+R GQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDP
Sbjct: 68 IENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDP 127
Query: 132 RTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 191
R DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRG
Sbjct: 128 RADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRG 187
Query: 192 TIRPGHKWDVMVDLFFYR 209
TI H W+VM DL+FYR
Sbjct: 188 TISREHPWEVMPDLYFYR 205
>UNIPROTKB|A6NE09 [details] [associations]
symbol:RPSAP58 "Protein RPSAP58" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] InterPro:IPR001865
InterPro:IPR005707 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 GO:GO:0006412 GO:GO:0003735
GO:GO:0015935 InterPro:IPR023591 SUPFAM:SSF52313 PANTHER:PTHR11489
TIGRFAMs:TIGR01012 HOGENOM:HOG000232073 OMA:ENVNFQM
HOVERGEN:HBG054466 EMBL:AC139769 IPI:IPI00793137 SMR:A6NE09
STRING:A6NE09 Ensembl:ENST00000354585 Ensembl:ENST00000496398
UCSC:uc002nrn.3 HGNC:HGNC:36809 Uniprot:A6NE09
Length = 295
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 130/198 (65%), Positives = 155/198 (78%)
Query: 12 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVA 71
L KE D+ LAA HLG N DFQME Y++KR++DGIYIINL +TWEKL +AAR IVA
Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEHYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 67
Query: 72 IENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 131
IENP D+ V S+R GQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDP
Sbjct: 68 IENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFWEPRLLVVTDP 127
Query: 132 RTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 191
R DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRG
Sbjct: 128 RADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRG 187
Query: 192 TIRPGHKWDVMVDLFFYR 209
TI H W+VM DL+FYR
Sbjct: 188 TISREHPWEVMPDLYFYR 205
>UNIPROTKB|P38982 [details] [associations]
symbol:Rpsa "40S ribosomal protein SA" species:10029
"Cricetulus griseus" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISS] InterPro:IPR001865
InterPro:IPR005707 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006412 GO:GO:0003735 GO:GO:0015935
InterPro:IPR023591 SUPFAM:SSF52313 PANTHER:PTHR11489
TIGRFAMs:TIGR01012 HAMAP:MF_03015 CTD:3921 HOVERGEN:HBG054466
HAMAP:MF_03016 EMBL:L16589 EMBL:Z22749 PIR:S33438
RefSeq:NP_001230962.1 ProteinModelPortal:P38982 SMR:P38982
PRIDE:P38982 GeneID:100689045 Uniprot:P38982
Length = 295
Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
Identities = 129/198 (65%), Positives = 155/198 (78%)
Query: 12 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVA 71
L KE D+ LAA HLG N DFQME+Y++KR++DGIYIINL +TWEKL +AAR IVA
Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 67
Query: 72 IENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 131
IENP D+ V S+R GQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDP
Sbjct: 68 IENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDP 127
Query: 132 RTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 191
R DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR V +MRG
Sbjct: 128 RADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVRRMRG 187
Query: 192 TIRPGHKWDVMVDLFFYR 209
TI H W+VM DL+FYR
Sbjct: 188 TISREHPWEVMPDLYFYR 205
>UNIPROTKB|Q01291 [details] [associations]
symbol:rps-0 "40S ribosomal protein S0" species:367110
"Neurospora crassa OR74A" [GO:0000028 "ribosomal small subunit
assembly" evidence=ISS] [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000461 "endonucleolytic cleavage to generate
mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0006407 "rRNA export from nucleus" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] [GO:0030686 "90S
preribosome" evidence=ISS] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0006412 GO:GO:0003735 GO:GO:0000028
EMBL:AABX02000008 GO:GO:0030686 GO:GO:0000447 GO:GO:0022627
GO:GO:0006407 InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052
GO:GO:0000461 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
HOGENOM:HOG000232073 KO:K02998 OMA:ENVNFQM HAMAP:MF_03015
OrthoDB:EOG4KH646 EMBL:U36470 EMBL:AL669992 PIR:T47199
RefSeq:XP_956840.1 UniGene:Ncr.17013 ProteinModelPortal:Q01291
SMR:Q01291 STRING:Q01291 PRIDE:Q01291
EnsemblFungi:EFNCRT00000002664 GeneID:3872987 KEGG:ncr:NCU03393
Uniprot:Q01291
Length = 290
Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
Identities = 140/279 (50%), Positives = 176/279 (63%)
Query: 6 ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMA 65
A P + DI+ +LAA+ H+G+KN M+ Y++K R DG+ I+N+GKTWEK+ +A
Sbjct: 4 ANLPSIFNATSTDIEQLLAAQCHIGSKNLGVHMQPYLWKTRADGVNILNVGKTWEKIVLA 63
Query: 66 ARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRL 125
AR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG+FTN + SF EPRL
Sbjct: 64 ARIIAAIDNPADICVISARPYGQRAVLKFAAHTGAQAIAGRFTPGSFTNYITRSFKEPRL 123
Query: 126 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 185
+I+TDPRTD Q IKEA+ NIP IA CD DSP YVD+ IP NNKG+H+IGC++W+LAR
Sbjct: 124 IIVTDPRTDAQAIKEASYVNIPVIALCDADSPTEYVDVAIPTNNKGRHAIGCVWWMLARE 183
Query: 186 VLQMRGTIRPGHK-WDVMVDLFFYRXXXXXXXXXXXXXXXIDYATAEYNTNLTSGDQWPS 244
VL++RGTI WDVMVDL+FYR + E + SG +P
Sbjct: 184 VLRLRGTIYNRETPWDVMVDLYFYRDPEAEAEEKVEEEK-LPGVEEEGVAAIESG--FP- 239
Query: 245 QIADGGWAGGEVQKPIPGVPYFPEAAPAATVPLGGDGWD 283
A G W P G + +AAP A P WD
Sbjct: 240 --ATGDWEAAPAGFPATGE--WSDAAPGAAAP----NWD 270
>ASPGD|ASPL0000040942 [details] [associations]
symbol:AN3172 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0000028 "ribosomal small subunit assembly"
evidence=IEA] [GO:0006407 "rRNA export from nucleus" evidence=IEA]
[GO:0002181 "cytoplasmic translation" evidence=IEA] [GO:0000461
"endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR001865
InterPro:IPR005707 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 GO:GO:0006412 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0003735 GO:GO:0000028 GO:GO:0030686
GO:GO:0000447 GO:GO:0022627 GO:GO:0006407 InterPro:IPR023591
SUPFAM:SSF52313 eggNOG:COG0052 GO:GO:0000461 PANTHER:PTHR11489
TIGRFAMs:TIGR01012 HOGENOM:HOG000232073 KO:K02998 OMA:ENVNFQM
HAMAP:MF_03015 OrthoDB:EOG4KH646 HSSP:O29132 RefSeq:XP_660776.1
STRING:Q5B8F8 PRIDE:Q5B8F8 EnsemblFungi:CADANIAT00009898
GeneID:2874532 KEGG:ani:AN3172.2 Uniprot:Q5B8F8
Length = 293
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 140/286 (48%), Positives = 179/286 (62%)
Query: 8 APRQL----SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQ 63
AP QL + DI+M+LAA+ HLG+KN ME Y++K R DG+ +IN+GKTWEK+
Sbjct: 2 APSQLPPIFNPTPQDIEMLLAAQCHLGSKNLQVHMEPYLWKTRPDGVNVINVGKTWEKIL 61
Query: 64 MAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEP 123
+AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN + SF EP
Sbjct: 62 LAARIIAAIDNPADICVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYITRSFKEP 121
Query: 124 RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA 183
RL+++TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H+IG ++WLLA
Sbjct: 122 RLIVVTDPRTDAQAIKEASYVNIPVIALCDTDSPTDFVDVAIPTNNKGRHAIGLIWWLLA 181
Query: 184 RMVLQMRGTIRPGH-KWDVMVDLFFYR---XXXXXXXXXXXXXXXIDYATAEYNTNLTSG 239
R VL++RGT+ WDV+VDL+FYR D + +
Sbjct: 182 REVLRLRGTLANREVDWDVVVDLYFYRDPEAEENKEVAEEKVASAEDVGAGAIESGFAA- 240
Query: 240 DQWPSQ--IADGGWAG-GEVQKPIPGVPYFPEAAPAATVPLGGDGW 282
+ W +Q A +A G G + +APA P GG+ W
Sbjct: 241 ESWDAQGAAAPAAFAAAGATSWEADGGDWAASSAPA---P-GGENW 282
>UNIPROTKB|Q5B8F8 [details] [associations]
symbol:rps0 "40S ribosomal protein S0" species:227321
"Aspergillus nidulans FGSC A4" [GO:0000028 "ribosomal small subunit
assembly" evidence=ISS] [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000461 "endonucleolytic cleavage to generate
mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0006407 "rRNA export from nucleus" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] [GO:0030686 "90S
preribosome" evidence=ISS] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0006412 EMBL:BN001306 EMBL:AACD01000051
GO:GO:0003735 GO:GO:0000028 GO:GO:0030686 GO:GO:0000447
GO:GO:0022627 GO:GO:0006407 InterPro:IPR023591 SUPFAM:SSF52313
eggNOG:COG0052 GO:GO:0000461 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
HOGENOM:HOG000232073 KO:K02998 OMA:ENVNFQM HAMAP:MF_03015
OrthoDB:EOG4KH646 HSSP:O29132 RefSeq:XP_660776.1 STRING:Q5B8F8
PRIDE:Q5B8F8 EnsemblFungi:CADANIAT00009898 GeneID:2874532
KEGG:ani:AN3172.2 Uniprot:Q5B8F8
Length = 293
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 140/286 (48%), Positives = 179/286 (62%)
Query: 8 APRQL----SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQ 63
AP QL + DI+M+LAA+ HLG+KN ME Y++K R DG+ +IN+GKTWEK+
Sbjct: 2 APSQLPPIFNPTPQDIEMLLAAQCHLGSKNLQVHMEPYLWKTRPDGVNVINVGKTWEKIL 61
Query: 64 MAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEP 123
+AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN + SF EP
Sbjct: 62 LAARIIAAIDNPADICVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYITRSFKEP 121
Query: 124 RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA 183
RL+++TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H+IG ++WLLA
Sbjct: 122 RLIVVTDPRTDAQAIKEASYVNIPVIALCDTDSPTDFVDVAIPTNNKGRHAIGLIWWLLA 181
Query: 184 RMVLQMRGTIRPGH-KWDVMVDLFFYR---XXXXXXXXXXXXXXXIDYATAEYNTNLTSG 239
R VL++RGT+ WDV+VDL+FYR D + +
Sbjct: 182 REVLRLRGTLANREVDWDVVVDLYFYRDPEAEENKEVAEEKVASAEDVGAGAIESGFAA- 240
Query: 240 DQWPSQ--IADGGWAG-GEVQKPIPGVPYFPEAAPAATVPLGGDGW 282
+ W +Q A +A G G + +APA P GG+ W
Sbjct: 241 ESWDAQGAAAPAAFAAAGATSWEADGGDWAASSAPA---P-GGENW 282
>UNIPROTKB|Q7RBT0 [details] [associations]
symbol:PY06059 "40S ribosomal protein SA" species:73239
"Plasmodium yoelii yoelii" [GO:0000028 "ribosomal small subunit
assembly" evidence=ISS] [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000461 "endonucleolytic cleavage to generate
mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0006407 "rRNA export from nucleus" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] [GO:0030686 "90S
preribosome" evidence=ISS] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0006412 GO:GO:0003735 GO:GO:0000028
GO:GO:0030686 GO:GO:0000447 GO:GO:0022627 GO:GO:0006407
InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052 GO:GO:0000461
PANTHER:PTHR11489 TIGRFAMs:TIGR01012 KO:K02998 HAMAP:MF_03015
HSSP:O29132 EMBL:AABL01002012 RefSeq:XP_726642.1
ProteinModelPortal:Q7RBT0 SMR:Q7RBT0 STRING:Q7RBT0 GeneID:3791982
KEGG:pyo:PY06059 EuPathDB:PlasmoDB:PY06059 Uniprot:Q7RBT0
Length = 263
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 122/197 (61%), Positives = 151/197 (76%)
Query: 13 SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAI 72
S KE I ML +VH+GTKN + +M+RYV+ R DG++IINL KT+EKLQ+AARVIVA+
Sbjct: 8 SPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARVIVAV 67
Query: 73 ENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPR 132
NP D++V SARP+G RAVLKFA+YT A AIAGR TPG TNQ+ F EPRLLI+TDPR
Sbjct: 68 SNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFIEPRLLIVTDPR 127
Query: 133 TDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT 192
TD Q +KE+A NIP IA CD+DSP+ +VDI IP NNKGK SI ++WLLA+ VL ++GT
Sbjct: 128 TDAQSVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVLYLKGT 187
Query: 193 IRPGHKWDVMVDLFFYR 209
I WDVMVD+F +R
Sbjct: 188 IPRSQAWDVMVDMFLWR 204
>GENEDB_PFALCIPARUM|PF10_0264 [details] [associations]
symbol:PF10_0264 "40S ribosomal protein,
putative" species:5833 "Plasmodium falciparum" [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0006412 GO:GO:0003735 EMBL:AE014185 GO:GO:0022627
InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052 PANTHER:PTHR11489
TIGRFAMs:TIGR01012 HOGENOM:HOG000232073 KO:K02998 OMA:ENVNFQM
HAMAP:MF_03015 HSSP:O29132 ProtClustDB:PTZ00254
RefSeq:XP_001347548.1 ProteinModelPortal:Q8IJD4 SMR:Q8IJD4
IntAct:Q8IJD4 MINT:MINT-1717658 PRIDE:Q8IJD4
EnsemblProtists:PF10_0264:mRNA GeneID:810421 KEGG:pfa:PF10_0264
EuPathDB:PlasmoDB:PF3D7_1026800 Uniprot:Q8IJD4
Length = 263
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 120/197 (60%), Positives = 150/197 (76%)
Query: 13 SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAI 72
S KE I ML +VH+GTKN + +M+RYV+ R DG++IINL KT+EKLQ+AAR+IVAI
Sbjct: 8 SPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARIIVAI 67
Query: 73 ENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPR 132
NP D++V SARP+G RAVLKFA+YT A AIAGR TPG TNQ+ F EPRLLI+TDPR
Sbjct: 68 SNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFTEPRLLIVTDPR 127
Query: 133 TDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT 192
TD Q +KE+A NIP IA CD+DSP+ +VDI IP NNKGK SI ++WLLA+ VL ++G
Sbjct: 128 TDAQSVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVLYLKGV 187
Query: 193 IRPGHKWDVMVDLFFYR 209
I W+VMVD+F +R
Sbjct: 188 IPRSEPWNVMVDMFLWR 204
>UNIPROTKB|Q8IJD4 [details] [associations]
symbol:PF10_0264 "40S ribosomal protein SA" species:36329
"Plasmodium falciparum 3D7" [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0006412 GO:GO:0003735 EMBL:AE014185
GO:GO:0022627 InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052
PANTHER:PTHR11489 TIGRFAMs:TIGR01012 HOGENOM:HOG000232073 KO:K02998
OMA:ENVNFQM HAMAP:MF_03015 HSSP:O29132 ProtClustDB:PTZ00254
RefSeq:XP_001347548.1 ProteinModelPortal:Q8IJD4 SMR:Q8IJD4
IntAct:Q8IJD4 MINT:MINT-1717658 PRIDE:Q8IJD4
EnsemblProtists:PF10_0264:mRNA GeneID:810421 KEGG:pfa:PF10_0264
EuPathDB:PlasmoDB:PF3D7_1026800 Uniprot:Q8IJD4
Length = 263
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 120/197 (60%), Positives = 150/197 (76%)
Query: 13 SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAI 72
S KE I ML +VH+GTKN + +M+RYV+ R DG++IINL KT+EKLQ+AAR+IVAI
Sbjct: 8 SPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARIIVAI 67
Query: 73 ENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPR 132
NP D++V SARP+G RAVLKFA+YT A AIAGR TPG TNQ+ F EPRLLI+TDPR
Sbjct: 68 SNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFTEPRLLIVTDPR 127
Query: 133 TDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT 192
TD Q +KE+A NIP IA CD+DSP+ +VDI IP NNKGK SI ++WLLA+ VL ++G
Sbjct: 128 TDAQSVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVLYLKGV 187
Query: 193 IRPGHKWDVMVDLFFYR 209
I W+VMVD+F +R
Sbjct: 188 IPRSEPWNVMVDMFLWR 204
>ZFIN|ZDB-GENE-050417-382 [details] [associations]
symbol:zgc:110181 "zgc:110181" species:7955 "Danio
rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR001865
InterPro:IPR005707 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 ZFIN:ZDB-GENE-050417-382
GO:GO:0006412 GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591
SUPFAM:SSF52313 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
HOVERGEN:HBG054466 EMBL:BC092777 IPI:IPI00570173
RefSeq:NP_001017838.1 UniGene:Dr.87993 ProteinModelPortal:Q568P4
SMR:Q568P4 GeneID:550536 KEGG:dre:550536 NextBio:20879777
Uniprot:Q568P4
Length = 295
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 131/276 (47%), Positives = 167/276 (60%)
Query: 12 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVA 71
L+ E DI MLAA+ H+G++N DFQM +YV+KR DG++IINL KTWEKL +AAR IVA
Sbjct: 5 LALTEPDILKMLAAKTHIGSENSDFQMLQYVYKRCIDGVHIINLKKTWEKLVLAARAIVA 64
Query: 72 IENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 131
IENP ++ S R GQRAVLK++KYT A IAGR TPG FTNQ+Q +F EPRLL++ DP
Sbjct: 65 IENPSEVFAISTRQQGQRAVLKYSKYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVADP 124
Query: 132 RTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 191
DHQ I EA+ NIP IAFCD DSP+RYVDI IP N K HS+G +FW L R VL++R
Sbjct: 125 LADHQSIVEASYVNIPVIAFCDVDSPLRYVDIAIPCNTKAPHSLGLMFWFLTREVLRLRA 184
Query: 192 TIRPGHKWDVMVDLFFYRX---XXXXXXXXXXXXXXIDYATAEYNTNLTSGDQWPSQIAD 248
I W++M D+FFYR + E + + + W +++A
Sbjct: 185 MISRDTPWEIMPDMFFYRAPEDVDKEEQAKQEALAAMPVRPIEADYSAPIAEDWSTEVAP 244
Query: 249 GGWA--GGEVQKPIPGVPYFPEAAPAATVPLGGDGW 282
WA + + P P PE A V D W
Sbjct: 245 TSWADEATDFAQAAPVAPAAPEQWSAEPVT---DDW 277
>POMBASE|SPBC685.06 [details] [associations]
symbol:rps001 "40S ribosomal protein S0A (p40)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006412 "translation" evidence=IC] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=TAS] [GO:0042274 "ribosomal small
subunit biogenesis" evidence=IMP] InterPro:IPR001865
InterPro:IPR005707 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 PomBase:SPBC685.06 GO:GO:0005634
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181
GO:GO:0006364 GO:GO:0042274 GO:GO:0022627 InterPro:IPR023591
SUPFAM:SSF52313 eggNOG:COG0052 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
HOGENOM:HOG000232073 KO:K02998 HAMAP:MF_03015 PIR:T40637
RefSeq:NP_596140.1 ProteinModelPortal:Q9Y7L8 SMR:Q9Y7L8
STRING:Q9Y7L8 PRIDE:Q9Y7L8 EnsemblFungi:SPBC685.06.1 GeneID:2541144
KEGG:spo:SPBC685.06 OMA:ANCHIGS OrthoDB:EOG4KH646 NextBio:20802257
Uniprot:Q9Y7L8
Length = 292
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 118/201 (58%), Positives = 152/201 (75%)
Query: 9 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARV 68
P L+ + DI+ +LAA H+G+KN + +M+ YV+KRR+DG++I+NLGKTWEKL +AARV
Sbjct: 7 PNILNATDEDIKQLLAANCHIGSKNLEVRMDNYVWKRRSDGVHILNLGKTWEKLVLAARV 66
Query: 69 IVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLIL 128
I IENP D+ V S R YG RAVLKFA +T A AIAGR TPG FTN + ++ EPRL+++
Sbjct: 67 IATIENPADVCVVSTRTYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLIVV 126
Query: 129 TDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQ 188
TDPR D Q IKEA+ NIP IA CDTDS + +VDI IP NNKG+ SIG +++LLAR VL+
Sbjct: 127 TDPRADAQAIKEASFVNIPVIALCDTDSILNHVDIAIPTNNKGRKSIGLIWYLLAREVLR 186
Query: 189 MRGTIRPGHKWDVMVDLFFYR 209
+RGT+ WDVM DL+FYR
Sbjct: 187 VRGTLSRSAPWDVMPDLYFYR 207
>POMBASE|SPAPJ698.02c [details] [associations]
symbol:rps002 "40S ribosomal protein S0B" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0006412 "translation" evidence=IC] [GO:0022627
"cytosolic small ribosomal subunit" evidence=TAS] [GO:0042274
"ribosomal small subunit biogenesis" evidence=IMP]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
PomBase:SPAPJ698.02c EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0003735 GO:GO:0002181 GO:GO:0006364 GO:GO:0042274
GO:GO:0022627 InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052
PANTHER:PTHR11489 TIGRFAMs:TIGR01012 HOGENOM:HOG000232073 KO:K02998
OMA:ENVNFQM HAMAP:MF_03015 OrthoDB:EOG4KH646 RefSeq:NP_594413.1
ProteinModelPortal:Q9P546 SMR:Q9P546 STRING:Q9P546 PRIDE:Q9P546
EnsemblFungi:SPAPJ698.02c.1 GeneID:2543293 KEGG:spo:SPAPJ698.02c
NextBio:20804311 Uniprot:Q9P546
Length = 287
Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
Identities = 124/209 (59%), Positives = 155/209 (74%)
Query: 1 MATGTATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
MA A P L+ + DI+ +LAA+ H+G+KN + +ME YV+KRR+DGI+IINLGKTWE
Sbjct: 1 MAESIAR-PSVLNATDDDIKNLLAADSHIGSKNLEVRMENYVWKRRSDGIHIINLGKTWE 59
Query: 61 KLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSF 120
KL +AARVI IENP D+ V S+RPYG RAVLKFA +T A AIAGR TPG FTN + ++
Sbjct: 60 KLVLAARVIATIENPADVCVISSRPYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTY 119
Query: 121 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
EPRL+I+TDPR D Q IKEA+ NIP IA CDTDS + +VD+ IP NNKG SIG ++
Sbjct: 120 REPRLIIVTDPRADAQAIKEASFVNIPVIALCDTDSILNHVDVAIPINNKGYKSIGLAWY 179
Query: 181 LLARMVLQMRGTIRPGHKWDVMVDLFFYR 209
LLAR VL++RG I W+VM DL+FYR
Sbjct: 180 LLAREVLRLRGNISRTTAWEVMPDLYFYR 208
>UNIPROTKB|I3LC48 [details] [associations]
symbol:RPSA "40S ribosomal protein SA" species:9823 "Sus
scrofa" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001865
InterPro:IPR005707 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 GO:GO:0006412 GO:GO:0003735
GO:GO:0015935 InterPro:IPR023591 SUPFAM:SSF52313 PANTHER:PTHR11489
TIGRFAMs:TIGR01012 GeneTree:ENSGT00390000015036 EMBL:CU928418
EMBL:FP312619 Ensembl:ENSSSCT00000004148 Uniprot:I3LC48
Length = 293
Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
Identities = 127/256 (49%), Positives = 160/256 (62%)
Query: 12 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVA 71
L KE D+ LAA HLG N DFQ E+Y++KR++DGIY+INL +TWEKL + AR +VA
Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQREQYIYKRKSDGIYVINLQRTWEKLLLVARAVVA 67
Query: 72 IENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 131
IENP D+ V S+R GQRAVL FA T A IAG TPGTFTNQ+Q +F EPRLL++TDP
Sbjct: 68 IENPADVSVISSRNTGQRAVLCFAAATGATPIAGLFTPGTFTNQIQAAFREPRLLVVTDP 127
Query: 132 RTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 191
R DHQP+ EA+ N+P IA C+TDSP+RYVDI IP N KG S+G ++W+L + VL+MRG
Sbjct: 128 RADHQPLTEASYVNLPAIALCNTDSPLRYVDIAIPCNKKGALSVGLMWWMLTQEVLRMRG 187
Query: 192 TIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXXIDYATAEYNTNLTSGDQWPSQIADGGW 251
H W+VM DL FYR E+ T+ +Q W
Sbjct: 188 ITSCEHPWEVMPDLSFYRDPEEIEKEEQASAEKA-VTKEEFQGEWTAPAPDATQPEVANW 246
Query: 252 AGGEVQKPIPGVPYFP 267
+ G VQ P + FP
Sbjct: 247 SEG-VQVPSVPIQQFP 261
>DICTYBASE|DDB_G0270316 [details] [associations]
symbol:rpsA "40S ribosomal protein SA" species:44689
"Dictyostelium discoideum" [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0009617 "response to bacterium" evidence=IEP]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA;IBA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;IBA] [GO:0030686
"90S preribosome" evidence=IBA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=IBA] [GO:0006407 "rRNA export from
nucleus" evidence=IBA] [GO:0000461 "endonucleolytic cleavage to
generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IBA] [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IBA] [GO:0000028 "ribosomal small subunit assembly"
evidence=IBA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001865
InterPro:IPR005707 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 dictyBase:DDB_G0270316
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0009617 GO:GO:0006412 GO:GO:0003735 GO:GO:0000028
GO:GO:0030686 GO:GO:0000447 GO:GO:0022627 GO:GO:0006407
InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052 GO:GO:0000461
PANTHER:PTHR11489 TIGRFAMs:TIGR01012 KO:K02998 HAMAP:MF_03015
OMA:FKEPRVI HSSP:O29132 RefSeq:XP_646700.1
ProteinModelPortal:Q55BY1 SMR:Q55BY1 STRING:Q55BY1
EnsemblProtists:DDB0230016 GeneID:8617674 KEGG:ddi:DDB_G0270316
ProtClustDB:PTZ00254 Uniprot:Q55BY1
Length = 245
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 122/201 (60%), Positives = 146/201 (72%)
Query: 9 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARV 68
P L+ + DI MLA + HLG N D +ME Y +KR+++G +IINL KTWEK+Q+AARV
Sbjct: 5 PAALNPHQDDILKMLACQTHLGGNNVDVEMESYTWKRKDNGHFIINLAKTWEKIQLAARV 64
Query: 69 IVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLIL 128
IVAIENP DI V SA+P GQRAVLKFA + A A +GR TPGTFTNQ+Q+ F EPRLLI+
Sbjct: 65 IVAIENPADISVISAKPLGQRAVLKFANFIGATAFSGRFTPGTFTNQIQSKFTEPRLLIV 124
Query: 129 TDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQ 188
DP D QP+ EA+ NIPTIA CDT S + VDI IP NN+GK+SI +FWLLAR VL
Sbjct: 125 ADPLLDKQPLMEASYVNIPTIALCDTTSCLDGVDIAIPCNNRGKNSIALMFWLLAREVLY 184
Query: 189 MRGTIRPGHKWDVMVDLFFYR 209
+RGTI W V VDLF YR
Sbjct: 185 LRGTIPRNTTWSVKVDLFIYR 205
>UNIPROTKB|Q3YAI0 [details] [associations]
symbol:LAMR1 "Ribosomal protein SA" species:9544 "Macaca
mulatta" [GO:0000028 "ribosomal small subunit assembly"
evidence=ISS] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0000461 "endonucleolytic cleavage to generate mature 3'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0003735 "structural constituent of ribosome" evidence=ISS]
[GO:0006407 "rRNA export from nucleus" evidence=ISS] [GO:0006412
"translation" evidence=ISS] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS] [GO:0030686 "90S preribosome" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00963 GO:GO:0006412
GO:GO:0003735 GO:GO:0000028 GO:GO:0030686 GO:GO:0000447
GO:GO:0022627 GO:GO:0006407 InterPro:IPR023591 SUPFAM:SSF52313
eggNOG:COG0052 GO:GO:0000461 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
HOGENOM:HOG000232073 HOVERGEN:HBG054466 OrthoDB:EOG40ZQZ6
EMBL:DQ148158 UniGene:Mmu.19607 InParanoid:Q3YAI0 Uniprot:Q3YAI0
Length = 167
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 111/167 (66%), Positives = 136/167 (81%)
Query: 42 VFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAH 101
++KR++DGIYIINL +TWEKL +AAR IVAIENP D+ V S+R GQRAVLKFA T A
Sbjct: 1 IYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGAT 60
Query: 102 AIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYV 161
IAGR TPGTFTNQ++ +F EPRLL++TDPR DHQP+ EA+ N+PTIA C+TDSP+RYV
Sbjct: 61 PIAGRFTPGTFTNQIRAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYV 120
Query: 162 DIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFY 208
DI IP NNKG HS+G ++W+LAR VL+MRGTI H W+VM DL+FY
Sbjct: 121 DIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFY 167
>CGD|CAL0000370 [details] [associations]
symbol:YST1 species:5476 "Candida albicans" [GO:0016020
"membrane" evidence=IDA] [GO:0005840 "ribosome" evidence=IGI;IDA]
[GO:0006412 "translation" evidence=IGI] [GO:0003735 "structural
constituent of ribosome" evidence=IGI] [GO:0016021 "integral to
membrane" evidence=ISS] [GO:0030686 "90S preribosome" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0000028 "ribosomal small subunit
assembly" evidence=IEA] [GO:0006407 "rRNA export from nucleus"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=IEA]
[GO:0000461 "endonucleolytic cleavage to generate mature 3'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR001865
InterPro:IPR005707 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 CGD:CAL0000370 GO:GO:0016021
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AACQ01000098
GO:GO:0015935 InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052
PANTHER:PTHR11489 TIGRFAMs:TIGR01012 KO:K02998 HAMAP:MF_03015
EMBL:Y11434 EMBL:AJ251858 RefSeq:XP_714681.1
ProteinModelPortal:O42817 SMR:O42817 STRING:O42817 GeneID:3643678
KEGG:cal:CaO19.6975 Uniprot:O42817
Length = 261
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 116/203 (57%), Positives = 144/203 (70%)
Query: 9 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARV 68
P D +++LAA VHLG KN + YV+K R DG+ IIN+GKTWEK+ +AAR+
Sbjct: 4 PASFDLTPEDAKLLLAANVHLGAKNVQVHNKPYVYKTRPDGMNIINIGKTWEKIVLAARI 63
Query: 69 IVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLIL 128
I A+ N D+ V S+R +GQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+++
Sbjct: 64 IAAVPNASDVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLVVV 123
Query: 129 TDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQ 188
TDPRTD Q IKE++ NIP IA D DSP YVD+ IP NNKGKHSIG ++WLLAR VL+
Sbjct: 124 TDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLLAREVLR 183
Query: 189 MRGTIRPGH--KWDVMVDLFFYR 209
+RG I P +W VM DL+FYR
Sbjct: 184 LRGII-PDRTTEWSVMPDLYFYR 205
>UNIPROTKB|O42817 [details] [associations]
symbol:RPS0 "40S ribosomal protein S0" species:237561
"Candida albicans SC5314" [GO:0003735 "structural constituent of
ribosome" evidence=IGI] [GO:0005840 "ribosome" evidence=IGI;IDA]
[GO:0006412 "translation" evidence=IGI] [GO:0016020 "membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
CGD:CAL0000370 GO:GO:0016021 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AACQ01000098 GO:GO:0015935 InterPro:IPR023591
SUPFAM:SSF52313 eggNOG:COG0052 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
KO:K02998 HAMAP:MF_03015 EMBL:Y11434 EMBL:AJ251858
RefSeq:XP_714681.1 ProteinModelPortal:O42817 SMR:O42817
STRING:O42817 GeneID:3643678 KEGG:cal:CaO19.6975 Uniprot:O42817
Length = 261
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 116/203 (57%), Positives = 144/203 (70%)
Query: 9 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARV 68
P D +++LAA VHLG KN + YV+K R DG+ IIN+GKTWEK+ +AAR+
Sbjct: 4 PASFDLTPEDAKLLLAANVHLGAKNVQVHNKPYVYKTRPDGMNIINIGKTWEKIVLAARI 63
Query: 69 IVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLIL 128
I A+ N D+ V S+R +GQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+++
Sbjct: 64 IAAVPNASDVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLVVV 123
Query: 129 TDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQ 188
TDPRTD Q IKE++ NIP IA D DSP YVD+ IP NNKGKHSIG ++WLLAR VL+
Sbjct: 124 TDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLLAREVLR 183
Query: 189 MRGTIRPGH--KWDVMVDLFFYR 209
+RG I P +W VM DL+FYR
Sbjct: 184 LRGII-PDRTTEWSVMPDLYFYR 205
>SGD|S000004038 [details] [associations]
symbol:RPS0B "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0002181
"cytoplasmic translation" evidence=IMP] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] [GO:0006407 "rRNA export from
nucleus" evidence=IGI] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IDA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0000461 "endonucleolytic cleavage to generate mature 3'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;IDA]
[GO:0030686 "90S preribosome" evidence=IBA] [GO:0000028 "ribosomal
small subunit assembly" evidence=IMP] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001865
InterPro:IPR005707 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 SGD:S000004038 EMBL:BK006945
GO:GO:0003735 GO:GO:0002181 GO:GO:0000028 GO:GO:0030686
GO:GO:0000447 EMBL:X94607 GO:GO:0022627 GO:GO:0006407
InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052 GO:GO:0000461
PANTHER:PTHR11489 TIGRFAMs:TIGR01012 HOGENOM:HOG000232073 KO:K02998
HAMAP:MF_03015 OrthoDB:EOG4KH646 GeneTree:ENSGT00390000015036
EMBL:U33756 EMBL:Z73220 PIR:S59364 RefSeq:NP_013149.1
ProteinModelPortal:P46654 SMR:P46654 IntAct:P46654
MINT:MINT-2787456 STRING:P46654 PaxDb:P46654 PeptideAtlas:P46654
EnsemblFungi:YLR048W GeneID:850737 KEGG:sce:YLR048W OMA:FKEPRVI
NextBio:966843 Genevestigator:P46654 GermOnline:YLR048W
Uniprot:P46654
Length = 252
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 117/236 (49%), Positives = 150/236 (63%)
Query: 18 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGD 77
D Q++LAA HLG +N E YVF R DG+++IN+GKTWEKL +AAR+I AI NP D
Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPED 72
Query: 78 IIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQP 137
++ S+R YGQRAVLKFA +T A IAGR TPG+FTN + SF EPRL+I+TDPR D Q
Sbjct: 73 VVAISSRTYGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRLDAQA 132
Query: 138 IKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPG 196
IKEA+ NIP IA D DSP +VD+ IP NN+GKHSIG +++LLAR VL++RG +
Sbjct: 133 IKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRT 192
Query: 197 HKWDVMVDLFFYRXXXXXXXXXXXXXXXIDYATAEYNTNLTSGD----QWPSQIAD 248
W +M DL+FYR + E +T G +W + AD
Sbjct: 193 QPWSIMPDLYFYRNPEEVEQVAEEAAAAEEGEEEEVKEEVTEGQAEATEWAEENAD 248
>SGD|S000003446 [details] [associations]
symbol:RPS0A "Ribosomal 40S subunit protein S0A" species:4932
"Saccharomyces cerevisiae" [GO:0006412 "translation" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;IDA] [GO:0002181 "cytoplasmic
translation" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0006407 "rRNA export from nucleus" evidence=IGI] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] [GO:0000461 "endonucleolytic
cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] [GO:0000028 "ribosomal small subunit
assembly" evidence=IMP] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
SGD:S000003446 EMBL:BK006941 GO:GO:0003735 GO:GO:0002181
GO:GO:0000028 GO:GO:0030686 GO:GO:0000447 PDB:1S1H PDBsum:1S1H
GO:GO:0022627 PDB:3IZB PDB:3O2Z PDB:3O30 PDB:3U5C PDB:3U5G
PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3U5C PDBsum:3U5G
GO:GO:0006407 InterPro:IPR023591 SUPFAM:SSF52313 PDB:1K5X
PDBsum:1K5X GO:GO:0000461 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
HOGENOM:HOG000232073 KO:K02998 HAMAP:MF_03015 OrthoDB:EOG4KH646
EMBL:M88277 EMBL:Z72999 PIR:S42143 RefSeq:NP_011730.1
ProteinModelPortal:P32905 SMR:P32905 DIP:DIP-5553N IntAct:P32905
MINT:MINT-562708 STRING:P32905 SWISS-2DPAGE:P32905
PeptideAtlas:P32905 EnsemblFungi:YGR214W GeneID:853128
KEGG:sce:YGR214W GeneTree:ENSGT00390000015036 OMA:PYGFKPV
EvolutionaryTrace:P32905 NextBio:973178 Genevestigator:P32905
GermOnline:YGR214W Uniprot:P32905
Length = 252
Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 110/193 (56%), Positives = 141/193 (73%)
Query: 18 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGD 77
D Q++LAA HLG +N E YVF R DG+++IN+GKTWEKL +AAR+I AI NP D
Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPED 72
Query: 78 IIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQP 137
++ S+R +GQRAVLKFA +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q
Sbjct: 73 VVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQA 132
Query: 138 IKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPG 196
IKEA+ NIP IA D DSP +VD+ IP NN+GKHSIG +++LLAR VL++RG +
Sbjct: 133 IKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRT 192
Query: 197 HKWDVMVDLFFYR 209
W +M DL+FYR
Sbjct: 193 QPWSIMPDLYFYR 205
>UNIPROTKB|Q75CQ9 [details] [associations]
symbol:RPS0 "40S ribosomal protein S0" species:284811
"Ashbya gossypii ATCC 10895" [GO:0000028 "ribosomal small subunit
assembly" evidence=ISS] [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000461 "endonucleolytic cleavage to generate
mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0006407 "rRNA export from nucleus" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] [GO:0030686 "90S
preribosome" evidence=ISS] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0006412 GO:GO:0003735 GO:GO:0000028
GO:GO:0030686 GO:GO:0000447 EMBL:AE016816 GenomeReviews:AE016816_GR
GO:GO:0022627 GO:GO:0006407 InterPro:IPR023591 SUPFAM:SSF52313
eggNOG:COG0052 GO:GO:0000461 PANTHER:PTHR11489 TIGRFAMs:TIGR01012
HOGENOM:HOG000232073 KO:K02998 OMA:ENVNFQM HAMAP:MF_03015
OrthoDB:EOG4KH646 RefSeq:NP_983264.1 HSSP:O29132
ProteinModelPortal:Q75CQ9 SMR:Q75CQ9 STRING:Q75CQ9 PRIDE:Q75CQ9
EnsemblFungi:AAS51088 GeneID:4619384 KEGG:ago:AGOS_ACL140C
PhylomeDB:Q75CQ9 Uniprot:Q75CQ9
Length = 253
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 110/193 (56%), Positives = 143/193 (74%)
Query: 18 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGD 77
D Q++LAA VHLG+KN E Y++K R DG+ II++GKTWEK+ +AAR+I AI N D
Sbjct: 13 DAQLLLAANVHLGSKNVQVHQEPYLYKTRPDGVNIIHIGKTWEKIVLAARIIAAIPNAED 72
Query: 78 IIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQP 137
++ S+R YGQRAVLKF+ +T A AIAGR TPG+FTN + SF EPRL+I+TDPR+D Q
Sbjct: 73 VVAISSRTYGQRAVLKFSAHTGATAIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQA 132
Query: 138 IKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPG 196
IKEA+ NIP IA D +SP YVD+ IP NN+GKHSIG +++LLAR VL++RG +
Sbjct: 133 IKEASYVNIPVIALTDLESPSEYVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRT 192
Query: 197 HKWDVMVDLFFYR 209
W +M DL+FYR
Sbjct: 193 QPWSIMPDLYFYR 205
>WB|WBGene00004469 [details] [associations]
symbol:rps-0 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0006915 "apoptotic
process" evidence=IMP] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0006915 GO:GO:0002119 GO:GO:0006412 GO:GO:0018996
GO:GO:0040035 GO:GO:0003735 GO:GO:0000028 GO:GO:0030686
GO:GO:0000447 GO:GO:0022627 GO:GO:0006407 InterPro:IPR023591
SUPFAM:SSF52313 eggNOG:COG0052 GO:GO:0000461 PANTHER:PTHR11489
TIGRFAMs:TIGR01012 HOGENOM:HOG000232073 KO:K02998 HAMAP:MF_03015
GeneTree:ENSGT00390000015036 EMBL:Z37983 PIR:T18742
RefSeq:NP_497978.1 ProteinModelPortal:P46769 SMR:P46769
DIP:DIP-26217N IntAct:P46769 MINT:MINT-1037948 STRING:P46769
World-2DPAGE:0020:P46769 PaxDb:P46769 EnsemblMetazoa:B0393.1.1
EnsemblMetazoa:B0393.1.2 GeneID:175628 KEGG:cel:CELE_B0393.1
UCSC:B0393.1.1 CTD:175628 WormBase:B0393.1 InParanoid:P46769
OMA:QAGADWT NextBio:888964 Uniprot:P46769
Length = 276
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 107/199 (53%), Positives = 148/199 (74%)
Query: 16 EADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENP 75
E D+ +LA + HLG+ N +FQM++YV+KRR DG IIN+ KTWEKL +AAR I A+ENP
Sbjct: 12 EEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLLAARAIAAVENP 71
Query: 76 GDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDH 135
D++V SARPY QRA+LKFA +T A AI GR +PG TNQ+Q +F EPRLL+++DPR DH
Sbjct: 72 ADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPRLLVISDPRIDH 131
Query: 136 QPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-- 193
Q + EA+ +P I+F +T+SP++ +DIG+P NNKG+ SIG ++W+LAR +L +RG I
Sbjct: 132 QAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKISR 191
Query: 194 RPGHKWD---VMVDLFFYR 209
+ G + +M DL+FYR
Sbjct: 192 QTGFVLEGKEIMPDLYFYR 210
>UNIPROTKB|P46769 [details] [associations]
symbol:rps-0 "40S ribosomal protein SA" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030686 "90S preribosome" evidence=IBA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0006407 "rRNA export
from nucleus" evidence=IBA] [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0000461 "endonucleolytic cleavage to
generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IBA] [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IBA] [GO:0000028 "ribosomal small subunit assembly"
evidence=IBA] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0006915 GO:GO:0002119 GO:GO:0006412 GO:GO:0018996
GO:GO:0040035 GO:GO:0003735 GO:GO:0000028 GO:GO:0030686
GO:GO:0000447 GO:GO:0022627 GO:GO:0006407 InterPro:IPR023591
SUPFAM:SSF52313 eggNOG:COG0052 GO:GO:0000461 PANTHER:PTHR11489
TIGRFAMs:TIGR01012 HOGENOM:HOG000232073 KO:K02998 HAMAP:MF_03015
GeneTree:ENSGT00390000015036 EMBL:Z37983 PIR:T18742
RefSeq:NP_497978.1 ProteinModelPortal:P46769 SMR:P46769
DIP:DIP-26217N IntAct:P46769 MINT:MINT-1037948 STRING:P46769
World-2DPAGE:0020:P46769 PaxDb:P46769 EnsemblMetazoa:B0393.1.1
EnsemblMetazoa:B0393.1.2 GeneID:175628 KEGG:cel:CELE_B0393.1
UCSC:B0393.1.1 CTD:175628 WormBase:B0393.1 InParanoid:P46769
OMA:QAGADWT NextBio:888964 Uniprot:P46769
Length = 276
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 107/199 (53%), Positives = 148/199 (74%)
Query: 16 EADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENP 75
E D+ +LA + HLG+ N +FQM++YV+KRR DG IIN+ KTWEKL +AAR I A+ENP
Sbjct: 12 EEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLLAARAIAAVENP 71
Query: 76 GDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDH 135
D++V SARPY QRA+LKFA +T A AI GR +PG TNQ+Q +F EPRLL+++DPR DH
Sbjct: 72 ADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPRLLVISDPRIDH 131
Query: 136 QPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-- 193
Q + EA+ +P I+F +T+SP++ +DIG+P NNKG+ SIG ++W+LAR +L +RG I
Sbjct: 132 QAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKISR 191
Query: 194 RPGHKWD---VMVDLFFYR 209
+ G + +M DL+FYR
Sbjct: 192 QTGFVLEGKEIMPDLYFYR 210
>UNIPROTKB|F1SJR1 [details] [associations]
symbol:F1SJR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001865
InterPro:IPR005707 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00963 GO:GO:0006412 GO:GO:0003735 GO:GO:0015935
InterPro:IPR023591 SUPFAM:SSF52313 PANTHER:PTHR11489
GeneTree:ENSGT00390000015036 OMA:XIEKEEQ EMBL:CU466503
Ensembl:ENSSSCT00000012334 ArrayExpress:F1SJR1 Uniprot:F1SJR1
Length = 211
Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 82/121 (67%), Positives = 98/121 (80%)
Query: 89 RAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPT 148
RAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+ N+PT
Sbjct: 1 RAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPT 60
Query: 149 IAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFY 208
IA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H W+VM DL+FY
Sbjct: 61 IALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFY 120
Query: 209 R 209
R
Sbjct: 121 R 121
>UNIPROTKB|F1M8B9 [details] [associations]
symbol:F1M8B9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005707 Pfam:PF00318 PRINTS:PR00395
GO:GO:0006412 GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591
SUPFAM:SSF52313 PANTHER:PTHR11489 IPI:IPI00390660
Ensembl:ENSRNOT00000032599 OMA:AMKLLAT Uniprot:F1M8B9
Length = 226
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 92/182 (50%), Positives = 121/182 (66%)
Query: 28 HLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYG 87
HLG N DFQME ++KR+ +G YIINL +TWEKL +AA +VAIENP I+ S G
Sbjct: 2 HLGGTNLDFQMEHNIYKRK-EGFYIINLKRTWEKLLLAACTVVAIENPAVSIISSGNT-G 59
Query: 88 QRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIP 147
QRAVLK A T AG TPGTFT Q+ ++F EP+LL++TD + DHQP+ EA+ P
Sbjct: 60 QRAVLKLAVATGTTPSAGHFTPGTFTKQIPSAFREPQLLVVTDSQADHQPLTEAS-SVCP 118
Query: 148 TIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFF 207
+ +TDSP+RYVDI I +G IG ++W+LA L++RGTI H W+V+ D +F
Sbjct: 119 PLLCVNTDSPLRYVDIAIQCKKQGSSLIGPMWWMLA--YLRLRGTISCEHPWEVLPD-YF 175
Query: 208 YR 209
YR
Sbjct: 176 YR 177
>UNIPROTKB|P95993 [details] [associations]
symbol:rps2 "30S ribosomal protein S2" species:273057
"Sulfolobus solfataricus P2" [GO:0000028 "ribosomal small subunit
assembly" evidence=ISS] [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000461 "endonucleolytic cleavage to generate
mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0006407 "rRNA export from nucleus" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] [GO:0030686 "90S
preribosome" evidence=ISS] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 InterPro:IPR023454 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 GO:GO:0006412 GO:GO:0003735
EMBL:AE006641 GenomeReviews:AE006641_GR GO:GO:0000028 GO:GO:0030686
GO:GO:0000447 EMBL:Y08257 GO:GO:0022627 GO:GO:0006407
InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052 KO:K02967
GO:GO:0000461 OMA:YWILARE ProtClustDB:PRK04020 HAMAP:MF_00291_A
PANTHER:PTHR11489 PANTHER:PTHR11489:SF2 TIGRFAMs:TIGR01012
PIR:S75421 RefSeq:NP_341638.1 ProteinModelPortal:P95993 SMR:P95993
GeneID:1455319 KEGG:sso:SSO0067 HOGENOM:HOG000232072 Uniprot:P95993
Length = 231
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 84/191 (43%), Positives = 126/191 (65%)
Query: 19 IQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDI 78
+ L+A VH+GT +C ME +V++ R +G+Y++++ K E+L++AA+ + + P DI
Sbjct: 39 VDTYLSAGVHIGTHSCTKYMESFVYRVRAEGLYVLDVRKIDERLRIAAKFLSRYD-PQDI 97
Query: 79 IVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPI 138
IV ++RPY R V KFA+ + A+ GR PGTFTN +++ EP++L+++DPRTD Q I
Sbjct: 98 IVVASRPYAYRPVQKFAEVVGSRALVGRIIPGTFTNPYLSTYIEPKVLLVSDPRTDTQAI 157
Query: 139 KEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHK 198
KEAA IP +AF DTD+ + Y+D+ IPANNKG+ S+ L+W LAR +L+ R I P
Sbjct: 158 KEAAKVGIPIVAFADTDAKIDYIDLIIPANNKGRKSLALLYWALARQILRERRVIPPDGD 217
Query: 199 WDVMVDLFFYR 209
V V F R
Sbjct: 218 LAVPVSEFEMR 228
>UNIPROTKB|F1S1E3 [details] [associations]
symbol:F1S1E3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001865
InterPro:IPR005707 Pfam:PF00318 PRINTS:PR00395 GO:GO:0006412
GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591 SUPFAM:SSF52313
PANTHER:PTHR11489 GeneTree:ENSGT00390000015036 EMBL:CU695067
Ensembl:ENSSSCT00000022457 Uniprot:F1S1E3
Length = 283
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 88/198 (44%), Positives = 120/198 (60%)
Query: 12 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVA 71
L K+ D+ AA HL N D QME+Y+++ +DGI I+NL + W+KL +A R I
Sbjct: 8 LKMKKEDVFKFPAAGTHLVGPNLDCQMEQYIYRWESDGICIVNLKRPWKKLLLAVRAIAV 67
Query: 72 IENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 131
IENP D+ R QR +L+FA T A +A TPGTF +Q+Q + P+L ++T P
Sbjct: 68 IENPPDVSAIPFRNTDQR-ILEFAAATGATPMAVCFTPGTFADQIQAA---PKLRVVTGP 123
Query: 132 RTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 191
R+DH+ + EAA N PT+A C+TD P+ YVDI I NN+G W+L R+VL M G
Sbjct: 124 RSDHKLLTEAAHVNPPTVALCNTDPPLCYVDIAILRNNRGLTQ-----WMLGRVVLYMPG 178
Query: 192 TIRPGHKWDVMVDLFFYR 209
TI H + M DL+FYR
Sbjct: 179 TISCEHSQEAMPDLYFYR 196
>UNIPROTKB|D4A495 [details] [associations]
symbol:D4A495 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA]
InterPro:IPR005707 GO:GO:0006412 GO:GO:0003735 GO:GO:0015935
InterPro:IPR023591 SUPFAM:SSF52313 PANTHER:PTHR11489
GeneTree:ENSGT00390000015036 IPI:IPI00779109
Ensembl:ENSRNOT00000057337 Uniprot:D4A495
Length = 244
Score = 301 (111.0 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
Identities = 68/128 (53%), Positives = 87/128 (67%)
Query: 82 SARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEA 141
S+R GQ+AVLKFA+ T A IAG TPG FTNQ+QT+F E +LL++TDPR DHQP+ EA
Sbjct: 53 SSRNTGQQAVLKFAR-TGAIPIAGHFTPGPFTNQIQTAFRESQLLVVTDPRADHQPLMEA 111
Query: 142 ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDV 201
+ N +C P+ YVDI IP NNKG HS G ++W+LA VL+M + W+V
Sbjct: 112 SYVN-----YCVL--PLCYVDIAIPCNNKGAHS-GLMWWMLAWDVLRM-------YPWEV 156
Query: 202 MVDLFFYR 209
M DL+FYR
Sbjct: 157 MPDLYFYR 164
Score = 95 (38.5 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
Identities = 31/82 (37%), Positives = 43/82 (52%)
Query: 15 KEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIEN 74
+E D+ LAAE G N DFQ+E Y++KR++D K+ E L A
Sbjct: 2 REGDVLKFLAAETQFGGTNLDFQIEWYLYKRKSDR------HKSEEDLGEA--------- 46
Query: 75 PGDIIVQSARPYGQRAVLKFAK 96
G + S+R GQ+AVLKFA+
Sbjct: 47 -GACSLISSRNTGQQAVLKFAR 67
>UNIPROTKB|J9P9K4 [details] [associations]
symbol:J9P9K4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005707 InterPro:IPR018130
Pfam:PF00318 PROSITE:PS00962 GO:GO:0006412 GO:GO:0003735
GO:GO:0015935 InterPro:IPR023591 SUPFAM:SSF52313 PANTHER:PTHR11489
GeneTree:ENSGT00390000015036 EMBL:AAEX03008008
Ensembl:ENSCAFT00000043626 Uniprot:J9P9K4
Length = 268
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 88/198 (44%), Positives = 117/198 (59%)
Query: 12 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVA 71
L KE D+ +LAAE H+G N DF ME+Y++KR+++G IINL + IVA
Sbjct: 5 LQMKEEDVLKLLAAETHVGGMNLDFHMEQYIYKRKSEGTCIINLENIGDT-SAGTSAIVA 63
Query: 72 IENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 131
I N D+ V S+R QRAVLKFA T A IAG G FT+Q+Q +F E RLL++TDP
Sbjct: 64 IGNSADVNVNSSRNSSQRAVLKFAAATGATPIAGCFISGNFTSQIQAAFWELRLLVVTDP 123
Query: 132 RTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 191
P+ E ++PTIA C++DSP+ + +P NKG S+G L W+LA G
Sbjct: 124 -----PLIEVFYVHLPTIALCNSDSPLWTL---LP-RNKGAGSMG-LIWMLA-----WPG 168
Query: 192 TIRPGHKWDVMVDLFFYR 209
TI H W+VM L+F R
Sbjct: 169 TISCEHPWEVMPKLYFCR 186
>UNIPROTKB|F1NKH1 [details] [associations]
symbol:RPSA "40S ribosomal protein SA" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] InterPro:IPR001865
InterPro:IPR005707 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00963 GO:GO:0006412 GO:GO:0003735 GO:GO:0015935
InterPro:IPR023591 SUPFAM:SSF52313 PANTHER:PTHR11489
GeneTree:ENSGT00390000015036 EMBL:AADN02001281 IPI:IPI00581613
Ensembl:ENSGALT00000037553 ArrayExpress:F1NKH1 Uniprot:F1NKH1
Length = 179
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 72/149 (48%), Positives = 91/149 (61%)
Query: 122 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 181
EPRLL++TDPR DHQP+ EA+ NIPTIA C+TDSP+RYVDI IP NNKG HS+G ++W+
Sbjct: 1 EPRLLVVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWM 60
Query: 182 LARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXXIDYATAEYNTNLTS-GD 240
LAR VL+MRGTI H W+VM DL+FYR E+ T T+
Sbjct: 61 LAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKA-VTKEEFQTEWTAPAP 119
Query: 241 QW--PSQIADGGWAGGEVQKPIPGVPYFP 267
++ P Q W+ G VQ P + FP
Sbjct: 120 EFTAPPQPEVADWSEG-VQVPSVPIQQFP 147
>UNIPROTKB|Q8TT39 [details] [associations]
symbol:rps2 "30S ribosomal protein S2" species:188937
"Methanosarcina acetivorans C2A" [GO:0000028 "ribosomal small
subunit assembly" evidence=ISS] [GO:0000447 "endonucleolytic
cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000461 "endonucleolytic cleavage to generate
mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0006407 "rRNA export from nucleus" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] [GO:0030686 "90S
preribosome" evidence=ISS] InterPro:IPR001865 InterPro:IPR005707
InterPro:IPR018130 InterPro:IPR023454 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 GO:GO:0006412 GO:GO:0003735
GO:GO:0000028 GO:GO:0030686 GO:GO:0000447 EMBL:AE010299
GenomeReviews:AE010299_GR GO:GO:0022627 GO:GO:0006407
InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052 KO:K02967
GO:GO:0000461 RefSeq:NP_615564.1 ProteinModelPortal:Q8TT39
SMR:Q8TT39 GeneID:1472492 KEGG:mac:MA0600 OMA:YWILARE
ProtClustDB:PRK04020 BioCyc:MACE188937:GI2O-667-MONOMER
HAMAP:MF_00291_A PANTHER:PTHR11489 PANTHER:PTHR11489:SF2
TIGRFAMs:TIGR01012 Uniprot:Q8TT39
Length = 225
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 66/174 (37%), Positives = 108/174 (62%)
Query: 19 IQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDI 78
I LAA VH+GT+ M R+V++ R DG+Y++++ T E++++A++++ + P I
Sbjct: 40 IDEYLAAGVHIGTQQKTQDMMRFVYRVRTDGLYVLDIQSTDERIRVASKLLSHYD-PARI 98
Query: 79 IVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPI 138
+V S+R YGQ F++ A+ GR PG+ TN F EP ++I+TDP D Q +
Sbjct: 99 LVVSSRQYGQHPARMFSRALGTRAMLGRFIPGSLTNPQIHGFFEPDVIIVTDPAGDAQVL 158
Query: 139 KEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT 192
KEA+ +P +A CDT++ VD+ IP NNKG+ ++ ++WLLAR V ++ T
Sbjct: 159 KEASSIGVPVVALCDTNNLTSNVDLVIPTNNKGRKALSLVYWLLAREVSRLNDT 212
>UNIPROTKB|I3LIK7 [details] [associations]
symbol:I3LIK7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001865
InterPro:IPR005707 PRINTS:PR00395 GO:GO:0006412 GO:GO:0003735
GO:GO:0015935 InterPro:IPR023591 SUPFAM:SSF52313 PANTHER:PTHR11489
GeneTree:ENSGT00390000015036 EMBL:FP325204
Ensembl:ENSSSCT00000031046 Uniprot:I3LIK7
Length = 248
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 78/197 (39%), Positives = 109/197 (55%)
Query: 12 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVA 71
L KE ++ L E+HL N +FQM++ K + GIY+++L + WEK+ +AA I
Sbjct: 5 LQMKEGEVLKFLTEEIHLDGANLNFQMQQ-PHKGKTGGIYVVSLKRIWEKV-LAACAIDT 62
Query: 72 IENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 131
IEN D+ V S+R Q+AVLKFA T A IA PGTFT Q+Q F E RLL L P
Sbjct: 63 IENSTDVTVISSRSTEQQAVLKFAAATGATPIAHCAVPGTFTRQIQAGFQEQRLLGLLIP 122
Query: 132 RTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 191
+ N+ T A +TDS + +DI IP N K HS+G ++W+ A VL +
Sbjct: 123 GLT----SSLSYVNLLTFALSNTDSTLCSMDIAIPCN-KEAHSVGLMWWMPAE-VLPLCD 176
Query: 192 TIRPGHKWDVMVDLFFY 208
+ H +VM L+F+
Sbjct: 177 ILSREHPQEVMPHLYFH 193
>RGD|1560987 [details] [associations]
symbol:RGD1560987 "similar to 40S ribosomal protein SA (p40)
(34/67 kDa laminin receptor)" species:10116 "Rattus norvegicus"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR001865
InterPro:IPR005707 Pfam:PF00318 PRINTS:PR00395 RGD:1560987
GO:GO:0006412 GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591
SUPFAM:SSF52313 PANTHER:PTHR11489 GeneTree:ENSGT00390000015036
IPI:IPI00394632 Ensembl:ENSRNOT00000032787 Uniprot:F1M3Q6
Length = 199
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 68/154 (44%), Positives = 92/154 (59%)
Query: 28 HLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYG 87
HLG + QM + V+ R++DG +IINL +TWE L A I A+EN D+ V S R G
Sbjct: 24 HLGGTHLGCQMAQSVYTRKSDGAHIINLRRTWETLLFPACPIAALENLADVSVISFRNTG 83
Query: 88 QRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIP 147
QRA+LKFA T I G TPG T+Q+Q + EP+LL++TDPR H + N P
Sbjct: 84 QRAMLKFAAATGVTPITGCFTPGIVTSQIQAASREPQLLVVTDPRAPHIGLNS----NQP 139
Query: 148 TIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 181
T+ TD P+ YVDI + NKG HS+ +++L
Sbjct: 140 TMVLWITDFPLCYVDIAL---NKGAHSVDLMYYL 170
>UNIPROTKB|E2RGM2 [details] [associations]
symbol:E2RGM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005707 Pfam:PF00318 GO:GO:0006412
GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591 SUPFAM:SSF52313
PANTHER:PTHR11489 GeneTree:ENSGT00390000015036 EMBL:AAEX03018045
Ensembl:ENSCAFT00000020490 Uniprot:E2RGM2
Length = 232
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 67/157 (42%), Positives = 93/157 (59%)
Query: 53 INLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTF 112
INL TWEKL +AA +VAI + + S P+ +F + A I PG F
Sbjct: 1 INLKGTWEKLLLAAHAVVAISS-AHVDAISFIPWPGILASEFTAASRATRIVVCFFPGNF 59
Query: 113 TNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGK 172
TNQ+Q +F E LL++T+PR DHQ + EA+ N+ + C DSP+ +VDI I N +G
Sbjct: 60 TNQIQAAFWELSLLVVTNPRADHQ-LTEASYVNLSLL--CVIDSPLHHVDIAISCN-RGA 115
Query: 173 HSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 209
HS+ ++W++AR VL M GTI H W+ M DL+FYR
Sbjct: 116 HSVSLVWWMMAREVLCMHGTISCEHPWEAMSDLYFYR 152
>UNIPROTKB|F1LT21 [details] [associations]
symbol:F1LT21 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA]
InterPro:IPR005707 GO:GO:0006412 GO:GO:0003735 GO:GO:0015935
InterPro:IPR023591 SUPFAM:SSF52313 PANTHER:PTHR11489
IPI:IPI00390967 Ensembl:ENSRNOT00000029955 Uniprot:F1LT21
Length = 206
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 66/168 (39%), Positives = 95/168 (56%)
Query: 42 VFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAH 101
+ +R +D IYIINL + W L + A +I + G+ GQ+A+L F+ T A
Sbjct: 1 IHRRESDAIYIINLKRAWLSLPVDAFIIFS----GNT--------GQQAMLLFSAATRAT 48
Query: 102 AIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYV 161
IA T TNQ+Q +F EP LL+ T PR HQ + +A+ N+PT A C+ +S + YV
Sbjct: 49 PIAYSFISRTLTNQIQAAFREPPLLVATGPRAGHQLLIKASYANLPT-ALCNRNSVLHYV 107
Query: 162 DIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 209
I P NN G HS+ ++W+L VL M T+ GH W+VM +L+ R
Sbjct: 108 GIATPGNN-GAHSMSLIWWILTWEVLCM--TVFCGHPWEVMPNLYLSR 152
>UNIPROTKB|I3L6M5 [details] [associations]
symbol:I3L6M5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR005707
GO:GO:0006412 GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591
SUPFAM:SSF52313 PANTHER:PTHR11489 GeneTree:ENSGT00390000015036
EMBL:FP312783 EMBL:FP476092 Ensembl:ENSSSCT00000030758
Ensembl:ENSSSCT00000032133 Uniprot:I3L6M5
Length = 270
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 72/184 (39%), Positives = 100/184 (54%)
Query: 7 TAPRQLSQ-KEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMA 65
T P L Q KE + AA G D Q++ V+ R++DG +NL +TWEK A
Sbjct: 2 TVPAPLMQMKEEQVLQSPAAGTPRGGTGPDVQVQPSVYGRKSDGFSFMNLKRTWEKRLPA 61
Query: 66 ARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRL 125
A A+ENP + ++S+R G RA LKFA A +A R TPGTFTNQ+Q +F EPR
Sbjct: 62 ACATAAVENPAHVSMRSSRTTG-RAGLKFAAAPGATPVA-RFTPGTFTNQVQAAFWEPRP 119
Query: 126 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 185
L P DHQP+ ++ + PT A CD P V + P +G +G +W++ R
Sbjct: 120 L----P-ADHQPLTGTSV-HPPTGALCDKPLPCA-VWLLPPGQQQGSSPVGLTWWMVPRE 172
Query: 186 VLQM 189
VL++
Sbjct: 173 VLRV 176
>UNIPROTKB|C9JQR9 [details] [associations]
symbol:RPSAP58 "Protein RPSAP58" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] InterPro:IPR001865
InterPro:IPR005707 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 GO:GO:0006412 GO:GO:0003735 GO:GO:0015935
InterPro:IPR023591 SUPFAM:SSF52313 eggNOG:COG0052 PANTHER:PTHR11489
OrthoDB:EOG40ZQZ6 EMBL:AC139769 HGNC:HGNC:36809 IPI:IPI00946437
ProteinModelPortal:C9JQR9 SMR:C9JQR9 STRING:C9JQR9 PaxDb:C9JQR9
Ensembl:ENST00000486528 ArrayExpress:C9JQR9 Bgee:C9JQR9
Uniprot:C9JQR9
Length = 73
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 43/66 (65%), Positives = 50/66 (75%)
Query: 12 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVA 71
L KE D+ LAA HLG N DFQME Y++KR++DGIYIINL +TWEKL +AAR IVA
Sbjct: 8 LQMKEEDVLKFLAAGTHLGGTNLDFQMEHYIYKRKSDGIYIINLKRTWEKLLLAARAIVA 67
Query: 72 IENPGD 77
IENP D
Sbjct: 68 IENPAD 73
>SGD|S000000996 [details] [associations]
symbol:MRP4 "Mitochondrial ribosomal protein of the small
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0032543 "mitochondrial translation" evidence=IC] [GO:0005763
"mitochondrial small ribosomal subunit" evidence=IPI] [GO:0003735
"structural constituent of ribosome" evidence=IEA;IPI] [GO:0005622
"intracellular" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0000049 "tRNA binding" evidence=ISS] InterPro:IPR001865
InterPro:IPR005706 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 SGD:S000000996 EMBL:BK006934
GO:GO:0003735 GO:GO:0032543 GO:GO:0000049 GO:GO:0005763 EMBL:U10555
InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
TIGRFAMs:TIGR01011 eggNOG:COG0052 KO:K02967
GeneTree:ENSGT00390000017382 OrthoDB:EOG4J14J1 EMBL:M82841
EMBL:AY558385 PIR:A42115 RefSeq:NP_011859.1
ProteinModelPortal:P32902 SMR:P32902 DIP:DIP-5035N IntAct:P32902
MINT:MINT-482507 STRING:P32902 PaxDb:P32902 PeptideAtlas:P32902
EnsemblFungi:YHL004W GeneID:856384 KEGG:sce:YHL004W CYGD:YHL004w
HOGENOM:HOG000248605 OMA:LNPTENR NextBio:981887
Genevestigator:P32902 GermOnline:YHL004W Uniprot:P32902
Length = 394
Score = 132 (51.5 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 33/104 (31%), Positives = 57/104 (54%)
Query: 19 IQMMLAAEVHLGTKNCDFQM--ERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPG 76
++ +++A VHLG ++ + Y++ GI+II+L +T L+ AA+V+ + G
Sbjct: 185 VESLMSAGVHLGQSTSLWRSSTQSYIYGEYK-GIHIIDLNQTLSYLKRAAKVVEGVSESG 243
Query: 77 DIIVQSARPYGQ-RAVLKFAKYTHAHAIAGRHTPGTFTNQMQTS 119
II+ GQ R + + AK TH + ++ R PGT TN + S
Sbjct: 244 GIILFLGTRQGQKRGLEEAAKKTHGYYVSTRWIPGTLTNSTEIS 287
Score = 103 (41.3 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 122 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 181
+P LL++ +P + + EA +PTIA DTDS V IP N+ S+ L +
Sbjct: 316 KPDLLVVLNPTENRNALLEAIKSRVPTIAIIDTDSEPSLVTYPIPGNDDSLRSVNFLLGV 375
Query: 182 LAR 184
LAR
Sbjct: 376 LAR 378
>ASPGD|ASPL0000014062 [details] [associations]
symbol:AN4251 species:162425 "Emericella nidulans"
[GO:0006412 "translation" evidence=IEA] [GO:0005763 "mitochondrial
small ribosomal subunit" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001865
InterPro:IPR005706 Pfam:PF00318 PRINTS:PR00395 GO:GO:0006412
EMBL:BN001302 GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591
PANTHER:PTHR12534 SUPFAM:SSF52313 TIGRFAMs:TIGR01011
HOGENOM:HOG000209871 EnsemblFungi:CADANIAT00004405 OMA:HECGLNN
Uniprot:C8V427
Length = 332
Score = 127 (49.8 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 35/102 (34%), Positives = 58/102 (56%)
Query: 19 IQMMLAAEVHLG--TKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPG 76
++++LA + HLG T + Q RY+F R +GI+II+L T L+ AA+V+ + G
Sbjct: 105 LELLLANQTHLGHSTSRWNPQNSRYIFGIR-EGIHIISLDITAAYLRRAAKVVEEVAARG 163
Query: 77 DIIV-QSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQ 117
+I+ RP +R V++ A+ + + I R PG+ TN Q
Sbjct: 164 GLILFAGTRPGQKRIVVRAAELSKGYHIFERWIPGSLTNGEQ 205
Score = 94 (38.1 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 122 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 181
+P L+I +P + + E L N+PTI DTD+ V IPAN+ S+ + +
Sbjct: 236 KPDLVICLNPLENEPLLHECGLNNVPTIGIIDTDADPTRVTYPIPANDDSLRSVAVIAGV 295
Query: 182 LAR 184
L R
Sbjct: 296 LGR 298
>TIGR_CMR|BA_3965 [details] [associations]
symbol:BA_3965 "ribosomal protein S2" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0003735 GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591
PANTHER:PTHR12534 SUPFAM:SSF52313 TIGRFAMs:TIGR01011
HOGENOM:HOG000071892 eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299
RefSeq:NP_846208.1 RefSeq:YP_020604.1 RefSeq:YP_029929.1
ProteinModelPortal:Q81WK8 SMR:Q81WK8 DNASU:1086819
EnsemblBacteria:EBBACT00000009487 EnsemblBacteria:EBBACT00000014287
EnsemblBacteria:EBBACT00000024301 GeneID:1086819 GeneID:2820094
GeneID:2848104 KEGG:ban:BA_3965 KEGG:bar:GBAA_3965 KEGG:bat:BAS3678
OMA:SYIDRAY BioCyc:BANT260799:GJAJ-3736-MONOMER
BioCyc:BANT261594:GJ7F-3853-MONOMER Uniprot:Q81WK8
Length = 233
Score = 132 (51.5 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 38/104 (36%), Positives = 59/104 (56%)
Query: 19 IQMMLAAEVHLG--TKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVI--VAIEN 74
++ +L A VH G T+ + +M+RY+F RN GIYII+L KT +K++ A +V+ +A E
Sbjct: 6 MKQLLEAGVHFGHQTRRWNPKMKRYIFTERN-GIYIIDLQKTVKKVEEAFKVMRDIAAEG 64
Query: 75 PGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQT 118
GDI+ + Q A+ + A + + R GT TN QT
Sbjct: 65 -GDILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTN-FQT 106
Score = 79 (32.9 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 123 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 182
P L + DPR + + EA +IP I DT+ +D IPAN+ ++ L +
Sbjct: 158 PSALFVVDPRKERIAVAEARKLHIPIIGIVDTNCDPDEIDHVIPANDDAIRAVKLLTSKM 217
Query: 183 ARMVLQMR 190
A +L+ +
Sbjct: 218 ADAILEAK 225
>CGD|CAL0001448 [details] [associations]
symbol:orf19.5747 species:5476 "Candida albicans" [GO:0005763
"mitochondrial small ribosomal subunit" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00963 CGD:CAL0001448
GO:GO:0006412 GO:GO:0003735 EMBL:AACQ01000046 EMBL:AACQ01000047
GO:GO:0015935 InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
TIGRFAMs:TIGR01011 eggNOG:COG0052 KO:K02967 RefSeq:XP_718017.1
RefSeq:XP_718083.1 ProteinModelPortal:Q5A8K1 STRING:Q5A8K1
GeneID:3640303 GeneID:3640369 KEGG:cal:CaO19.13170
KEGG:cal:CaO19.5747 Uniprot:Q5A8K1
Length = 460
Score = 120 (47.3 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 31/107 (28%), Positives = 56/107 (52%)
Query: 19 IQMMLAAEVHLGTKNCDFQ--MERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPG 76
I ++AA HLG F+ M+ +++ D ++II+L KT EKL +A +VI + G
Sbjct: 238 IAKLMAAGCHLGHSTSSFRPSMQPFIYGIY-DKVHIIDLNKTLEKLTLACKVIEGVVEKG 296
Query: 77 DIIVQSARPYG----QRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTS 119
+++ Q A++K ++ +H + + R PGT TN + +
Sbjct: 297 GVVLYVGTHKNNSSIQEALVKASERSHGYYVNKRWIPGTITNYTEVT 343
Score = 96 (38.9 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 20/72 (27%), Positives = 34/72 (47%)
Query: 113 TNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGK 172
T + +P L++L +P + IKE IPTI CDTD + IP N+
Sbjct: 363 TTKNSNKIIKPDLVVLLNPVENRNCIKECISAGIPTIGLCDTDMEPSLLTYPIPCNDDSV 422
Query: 173 HSIGCLFWLLAR 184
S+ + ++++
Sbjct: 423 RSVNLMLGIMSK 434
>TIGR_CMR|CHY_1787 [details] [associations]
symbol:CHY_1787 "ribosomal protein S2" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006412 GO:GO:0003735 GO:GO:0015935 HAMAP:MF_00291_B
InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
TIGRFAMs:TIGR01011 HOGENOM:HOG000071892 eggNOG:COG0052 KO:K02967
OMA:SYIDRAY HSSP:P80371 RefSeq:YP_360607.1
ProteinModelPortal:Q3AB77 SMR:Q3AB77 STRING:Q3AB77 GeneID:3726905
KEGG:chy:CHY_1787 PATRIC:21276685
BioCyc:CHYD246194:GJCN-1786-MONOMER Uniprot:Q3AB77
Length = 232
Score = 104 (41.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 32/99 (32%), Positives = 50/99 (50%)
Query: 19 IQMMLAAEVHLG--TKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIE-NP 75
++ +L A VH G T+ + +M Y+F RN GIYII+L KT +KL+ A + +
Sbjct: 6 MKQLLEAGVHFGHQTRRWNPKMAEYIFTDRN-GIYIIDLQKTAKKLEEAYSFVRELSAQG 64
Query: 76 GDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTN 114
G I+ + Q A+ + A+ + R GT TN
Sbjct: 65 GTILFVGTKKQAQDAIKEEAERCGMFYVNQRWLGGTLTN 103
Score = 78 (32.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 123 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 182
P L + DPR + + EA +IP +A DT+ VD IP N+ ++ + +
Sbjct: 158 PDALFVVDPRKEKIAVAEARKLDIPVVAIVDTNCDPDEVDYVIPGNDDAIRAVKLITSKI 217
Query: 183 ARMVLQMR 190
A V++ R
Sbjct: 218 ADAVIEGR 225
>POMBASE|SPAC24C9.10c [details] [associations]
symbol:mrp4 "mitochondrial ribosomal protein subunit S2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000049
"tRNA binding" evidence=ISS] [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005763 "mitochondrial small ribosomal subunit" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0032543 "mitochondrial
translation" evidence=NAS] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 PomBase:SPAC24C9.10c EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003735 GO:GO:0032543 GO:GO:0000049
GO:GO:0005763 InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
TIGRFAMs:TIGR01011 eggNOG:COG0052 KO:K02967 PIR:T38351
RefSeq:NP_594035.1 ProteinModelPortal:O13970 STRING:O13970
EnsemblFungi:SPAC24C9.10c.1 GeneID:2541569 KEGG:spo:SPAC24C9.10c
HOGENOM:HOG000209871 OMA:NTEARTS OrthoDB:EOG4J14J1 NextBio:20802663
Uniprot:O13970
Length = 263
Score = 96 (38.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 33/109 (30%), Positives = 56/109 (51%)
Query: 9 PRQLSQKEADIQMMLAAEVHLG--TKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAA 66
P QLS + ++L++ HLG T + + +++ +R +GI+II+L +T L+ A
Sbjct: 45 PSQLS-----LPLLLSSGAHLGHSTSIWNPYTQPFIYGKR-EGIHIISLDQTMVYLRRAI 98
Query: 67 RVIVAIENPGDIIVQSARPYGQR-AVLKFAKYTHAHAIAGRHTPGTFTN 114
V+ +I II+ GQ+ +V+ AK + I R PG TN
Sbjct: 99 SVVRSIAKENGIILFIGTRNGQKDSVVAAAKRARGYHIFDRWLPGLLTN 147
Score = 89 (36.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 119 SFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCL 178
S+ P L+++ +P + EA ++PTI DTD+ R V IPAN+ +
Sbjct: 176 SYVFPDLMVILNPLENKSACLEAQKTHVPTIGIIDTDADPRMVTYPIPANDDSLRCTDLI 235
Query: 179 FWLLARMVLQ 188
LL+R+ Q
Sbjct: 236 AGLLSRVAEQ 245
>UNIPROTKB|G4NGF2 [details] [associations]
symbol:MGG_04331 "37S ribosomal protein MRP4"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00963 GO:GO:0006412
GO:GO:0003735 EMBL:CM001236 GO:GO:0015935 InterPro:IPR023591
PANTHER:PTHR12534 SUPFAM:SSF52313 TIGRFAMs:TIGR01011 KO:K02967
RefSeq:XP_003719476.1 ProteinModelPortal:G4NGF2
EnsemblFungi:MGG_04331T0 GeneID:2677383 KEGG:mgr:MGG_04331
Uniprot:G4NGF2
Length = 398
Score = 105 (42.0 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 28/106 (26%), Positives = 59/106 (55%)
Query: 15 KEADIQMMLAAEVHLGTKNCDFQME--RYVFKRRNDGIYIINLGKTWEKLQMAARVIVAI 72
K+ +++++A++ H+G + R+++ R D I+II+L +T L+ AAR++ +
Sbjct: 135 KDVTLELLMASQCHMGHHKSLWNPANARFIYGVRQD-IHIISLEQTAAHLRRAARLVEEV 193
Query: 73 ENPGDIIVQSARPYGQRAVL-KFAKYTHAHAIAGRHTPGTFTNQMQ 117
G +I+ GQ ++ + A+ + + + + TPGT TN+ Q
Sbjct: 194 AFCGGLILFVGTRQGQMEIVTRAAELSRSCHLFNKWTPGTITNRDQ 239
Score = 82 (33.9 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 23/80 (28%), Positives = 39/80 (48%)
Query: 106 RHTPGTFTNQMQTSFN-EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIG 164
R PG F +Q P L+++ +P ++ + E + IPTI DT++ + V
Sbjct: 254 RELPG-FEKHLQERRPITPDLVVVLNPLENNILLHECKVSQIPTIGVIDTNADVTKVTYP 312
Query: 165 IPANNKGKHSIGCLFWLLAR 184
IPAN+ S+ + +L R
Sbjct: 313 IPANDDSLRSMAVIAGVLGR 332
>TIGR_CMR|DET_0377 [details] [associations]
symbol:DET_0377 "ribosomal protein S2" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0006412 GO:GO:0003735 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299 OMA:SYIDRAY
HSSP:P80371 RefSeq:YP_181123.1 ProteinModelPortal:Q3Z9H6
STRING:Q3Z9H6 GeneID:3230301 KEGG:det:DET0377 PATRIC:21607823
BioCyc:DETH243164:GJNF-377-MONOMER Uniprot:Q3Z9H6
Length = 245
Score = 101 (40.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 31/100 (31%), Positives = 48/100 (48%)
Query: 18 DIQMMLAAEVHLG--TKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVI-VAIEN 74
+I+ +L A H G T +M++Y+F +RN GI+II+L KT L A I +
Sbjct: 5 NIKELLEAGAHFGHQTSRWHPRMKKYIFTKRN-GIHIIDLEKTVVMLDKACNYINQVVSE 63
Query: 75 PGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTN 114
G ++ + Q + + AK + I R T G TN
Sbjct: 64 GGKVLFVGTKKQAQEILAEEAKRCGMYFINQRWTGGILTN 103
Score = 74 (31.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 17/72 (23%), Positives = 35/72 (48%)
Query: 123 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 182
P ++ + DP + + EA +P +A DT+ VD IP+N+ +I + +
Sbjct: 158 PDVIFVVDPTKEKIAMAEAKRMGVPLVAMVDTNCNPDEVDYPIPSNDDAMRAIKLICSKM 217
Query: 183 ARMVLQMRGTIR 194
A V++ + ++
Sbjct: 218 ADSVIEAQNALK 229
>TIGR_CMR|APH_0397 [details] [associations]
symbol:APH_0397 "ribosomal protein S2" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0006412 GO:GO:0003735 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 OMA:NVAGGTD RefSeq:YP_505002.1
ProteinModelPortal:Q2GKU9 SMR:Q2GKU9 STRING:Q2GKU9 GeneID:3930049
KEGG:aph:APH_0397 PATRIC:20949402 ProtClustDB:PRK05299
BioCyc:APHA212042:GHPM-425-MONOMER Uniprot:Q2GKU9
Length = 296
Score = 90 (36.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 22/66 (33%), Positives = 33/66 (50%)
Query: 123 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 182
P +L + D +H I+EA IP +A DT+S R VD IP N+ SI +
Sbjct: 162 PHILFVIDTNKEHIAIQEANKLKIPVVAVLDTNSDPRGVDYPIPGNDDSIRSIDFFCRAV 221
Query: 183 ARMVLQ 188
+ +L+
Sbjct: 222 SNTILE 227
Score = 68 (29.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 30/115 (26%), Positives = 49/115 (42%)
Query: 16 EADIQMMLAAEVHLGTKNCDFQ--MERYVFK-RRNDGIYIINLGKTWEKLQMAARVIV-A 71
E I+ ++ A VHLG K + M Y++ R I+II+L KT L+ A V+
Sbjct: 6 EFSIRDLMEAGVHLGHKAGRWNPAMAPYIYGVHRYKDIHIIDLRKTAVLLRNALSVLYDV 65
Query: 72 IENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLL 126
+ G ++ + + + A + + R G TN S + RLL
Sbjct: 66 VHRRGRVLFVGTKVQASNVIAEEAARCGQYYVNHRWLGGMLTNWETVSSSIRRLL 120
>TIGR_CMR|GSU_1921 [details] [associations]
symbol:GSU_1921 "ribosomal protein S2" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR001865
InterPro:IPR005706 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 GO:GO:0006412 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0003735 GO:GO:0015935
HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299 OMA:SYIDRAY
RefSeq:NP_952970.1 ProteinModelPortal:Q74BW1 SMR:Q74BW1
GeneID:2685346 KEGG:gsu:GSU1921 PATRIC:22026707
BioCyc:GSUL243231:GH27-1978-MONOMER Uniprot:Q74BW1
Length = 251
Score = 80 (33.2 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 29/96 (30%), Positives = 45/96 (46%)
Query: 22 MLAAEVHLG--TKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGD-I 78
+L A VH G TK + +M+ Y+F RN GIYII+L KT + A + G+ +
Sbjct: 9 LLEAGVHFGHQTKRWNPKMKPYIFGARN-GIYIIDLQKTVRLFKNAYNFVRENAQAGETM 67
Query: 79 IVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTN 114
+ + Q A+ + A + + R G TN
Sbjct: 68 LFVGTKKQAQDAIGEEAVRCGMYFVNQRWLGGMLTN 103
Score = 73 (30.8 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 20/66 (30%), Positives = 31/66 (46%)
Query: 123 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 182
P L + DP+ + I EA IP +A DT+ +D IP N+ +I L +
Sbjct: 158 PGALFVIDPKNETIAISEAKKLGIPVVAVVDTNCDPDPIDYVIPGNDDAIRAIRLLTSKM 217
Query: 183 ARMVLQ 188
A V++
Sbjct: 218 ADAVIE 223
>TIGR_CMR|SPO_1976 [details] [associations]
symbol:SPO_1976 "ribosomal protein S2" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0003735
GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299 OMA:SYIDRAY
RefSeq:YP_167211.1 ProteinModelPortal:Q5LRZ4 SMR:Q5LRZ4
GeneID:3192960 KEGG:sil:SPO1976 PATRIC:23377283 Uniprot:Q5LRZ4
Length = 257
Score = 82 (33.9 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 27/118 (22%), Positives = 56/118 (47%)
Query: 16 EADIQMMLAAEVHLG--TKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIV-AI 72
E ++ +L A VH G T+ + +M +++ RN GI+I++L +T L A + + +
Sbjct: 5 EFSMRQLLEAGVHFGHQTQRWNPRMSPFIYGARN-GIHILDLTQTVPMLDQALKAVRDTV 63
Query: 73 ENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTD 130
G ++ + + + A+ + + + R GT TN S + RL ++ +
Sbjct: 64 AKGGRVLFVGTKRQASGPIAEAAEKSAQYYMNHRWLGGTLTNWKTVSQSIQRLRMIDE 121
Score = 71 (30.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 22/65 (33%), Positives = 29/65 (44%)
Query: 123 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 182
P LL + D + + I EA IP +A DT+ VD IP N+ +I L
Sbjct: 159 PDLLFVIDVKKEALAIAEANKLGIPVVAVVDTNCSPDGVDYIIPGNDDAARAISLYCDLA 218
Query: 183 ARMVL 187
AR L
Sbjct: 219 ARAAL 223
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.139 0.451 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 355 318 0.00083 116 3 11 22 0.48 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 64
No. of states in DFA: 621 (66 KB)
Total size of DFA: 257 KB (2137 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.95u 0.10s 24.05t Elapsed: 00:00:01
Total cpu time: 23.95u 0.10s 24.05t Elapsed: 00:00:01
Start: Sat May 11 14:45:09 2013 End: Sat May 11 14:45:10 2013