Query 018453
Match_columns 355
No_of_seqs 224 out of 2941
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 09:09:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018453.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018453hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 1.3E-30 2.9E-35 240.9 26.9 286 48-343 7-305 (485)
2 TIGR01299 synapt_SV2 synaptic 100.0 1.4E-28 3.1E-33 240.9 29.7 274 48-338 163-475 (742)
3 KOG0254 Predicted transporter 100.0 4.8E-28 1E-32 232.5 25.9 286 46-343 39-330 (513)
4 TIGR00887 2A0109 phosphate:H+ 100.0 1.1E-26 2.4E-31 222.8 26.6 276 51-341 15-321 (502)
5 PRK10077 xylE D-xylose transpo 99.9 2.5E-24 5.4E-29 205.5 29.4 275 50-341 10-304 (479)
6 TIGR00879 SP MFS transporter, 99.9 3.1E-24 6.6E-29 204.0 27.2 285 48-342 24-318 (481)
7 TIGR02332 HpaX 4-hydroxyphenyl 99.9 3.8E-24 8.3E-29 200.2 25.9 182 51-239 7-194 (412)
8 COG2271 UhpC Sugar phosphate p 99.9 1.4E-25 3.1E-30 199.5 14.7 266 51-353 28-297 (448)
9 COG2814 AraJ Arabinose efflux 99.9 8.7E-24 1.9E-28 190.3 24.1 244 51-353 12-256 (394)
10 TIGR00898 2A0119 cation transp 99.9 7.8E-24 1.7E-28 203.5 23.4 227 73-320 110-339 (505)
11 PRK10642 proline/glycine betai 99.9 1.1E-22 2.5E-27 194.4 27.5 181 54-242 18-220 (490)
12 PF00083 Sugar_tr: Sugar (and 99.9 6.5E-29 1.4E-33 235.3 -16.5 275 56-343 4-288 (451)
13 PRK11663 regulatory protein Uh 99.9 4.9E-23 1.1E-27 194.1 21.7 178 55-240 26-204 (434)
14 TIGR00903 2A0129 major facilit 99.9 5.5E-23 1.2E-27 189.0 20.6 215 71-341 10-225 (368)
15 TIGR00891 2A0112 putative sial 99.9 4.6E-22 9.9E-27 185.4 26.2 184 51-241 11-195 (405)
16 PRK10406 alpha-ketoglutarate t 99.9 5.7E-22 1.2E-26 186.8 27.0 182 53-239 23-223 (432)
17 PRK03545 putative arabinose tr 99.9 3.2E-22 6.9E-27 186.0 24.8 172 58-237 15-187 (390)
18 PRK12307 putative sialic acid 99.9 5.7E-22 1.2E-26 186.5 25.5 178 54-239 20-197 (426)
19 PRK11551 putative 3-hydroxyphe 99.9 8.5E-22 1.8E-26 184.1 26.4 184 49-240 12-196 (406)
20 PRK14995 methyl viologen resis 99.9 5.4E-22 1.2E-26 190.0 25.5 181 50-238 4-186 (495)
21 TIGR00894 2A0114euk Na(+)-depe 99.9 6E-22 1.3E-26 188.5 24.8 256 51-338 18-291 (465)
22 KOG2532 Permease of the major 99.9 7.5E-22 1.6E-26 184.7 24.6 222 88-341 67-291 (466)
23 KOG0255 Synaptic vesicle trans 99.9 7.7E-22 1.7E-26 190.3 23.4 218 88-318 112-332 (521)
24 TIGR00895 2A0115 benzoate tran 99.9 1.5E-21 3.4E-26 181.2 24.5 181 55-243 20-201 (398)
25 PRK10213 nepI ribonucleoside t 99.9 5.4E-21 1.2E-25 177.9 27.0 158 72-237 40-198 (394)
26 PRK15403 multidrug efflux syst 99.9 1.9E-21 4.2E-26 181.9 24.0 176 55-238 19-195 (413)
27 PRK09556 uhpT sugar phosphate 99.9 4.1E-22 8.8E-27 189.6 17.6 183 50-239 27-217 (467)
28 KOG2533 Permease of the major 99.9 2.2E-21 4.8E-26 182.0 21.7 255 47-337 40-302 (495)
29 KOG0253 Synaptic vesicle trans 99.9 1.1E-21 2.3E-26 171.0 18.1 262 55-336 81-354 (528)
30 PRK09952 shikimate transporter 99.9 2.1E-20 4.6E-25 176.3 27.2 183 53-241 23-226 (438)
31 TIGR00893 2A0114 d-galactonate 99.9 1.9E-21 4.1E-26 180.1 19.5 166 65-238 7-173 (399)
32 PLN00028 nitrate transmembrane 99.9 2.7E-20 5.9E-25 177.3 27.2 161 67-235 51-219 (476)
33 TIGR00711 efflux_EmrB drug res 99.9 8E-21 1.7E-25 181.6 23.3 175 55-237 5-180 (485)
34 PRK09705 cynX putative cyanate 99.9 2.1E-20 4.5E-25 174.0 25.2 152 69-228 26-177 (393)
35 PRK15075 citrate-proton sympor 99.9 2.4E-20 5.1E-25 175.9 24.1 163 53-223 16-200 (434)
36 PRK03699 putative transporter; 99.9 3.8E-20 8.2E-25 172.4 24.5 171 55-232 10-180 (394)
37 TIGR00710 efflux_Bcr_CflA drug 99.9 1.9E-20 4E-25 173.5 22.0 167 64-238 17-184 (385)
38 PRK10091 MFS transport protein 99.9 4.4E-20 9.6E-25 171.2 23.9 174 56-237 7-181 (382)
39 TIGR00881 2A0104 phosphoglycer 99.9 1.3E-21 2.8E-26 180.5 13.5 171 61-239 4-176 (379)
40 PRK11273 glpT sn-glycerol-3-ph 99.9 5.5E-20 1.2E-24 174.3 23.7 177 55-240 32-214 (452)
41 PF07690 MFS_1: Major Facilita 99.9 2.8E-20 6.2E-25 169.9 20.9 172 59-238 3-176 (352)
42 PRK03893 putative sialic acid 99.9 1.9E-19 4.1E-24 172.7 26.7 180 53-240 21-200 (496)
43 KOG1330 Sugar transporter/spin 99.9 2.7E-22 5.8E-27 180.3 6.3 187 45-238 26-213 (493)
44 PRK15402 multidrug efflux syst 99.9 1E-19 2.2E-24 170.2 23.8 183 48-238 9-192 (406)
45 KOG0252 Inorganic phosphate tr 99.9 1.7E-21 3.7E-26 174.6 10.7 283 40-340 30-336 (538)
46 PRK15034 nitrate/nitrite trans 99.9 3.8E-19 8.2E-24 165.6 26.5 213 68-341 50-285 (462)
47 TIGR00890 2A0111 Oxalate/Forma 99.9 4.9E-20 1.1E-24 169.8 20.5 159 70-237 21-180 (377)
48 TIGR00712 glpT glycerol-3-phos 99.9 7.3E-20 1.6E-24 172.8 21.2 177 55-239 30-211 (438)
49 TIGR00900 2A0121 H+ Antiporter 99.9 1.2E-19 2.6E-24 166.5 21.8 164 62-233 9-177 (365)
50 TIGR00886 2A0108 nitrite extru 99.8 2.5E-19 5.4E-24 164.9 22.9 167 65-239 14-193 (366)
51 TIGR00806 rfc RFC reduced fola 99.8 1.6E-19 3.4E-24 165.5 21.1 247 68-341 42-295 (511)
52 PRK10133 L-fucose transporter; 99.8 6.5E-19 1.4E-23 166.0 25.6 148 53-207 27-177 (438)
53 PRK11043 putative transporter; 99.8 3.9E-19 8.4E-24 165.9 24.0 163 67-237 21-183 (401)
54 TIGR00805 oat sodium-independe 99.8 2.3E-20 5E-25 182.4 16.3 175 56-237 37-283 (633)
55 PRK11652 emrD multidrug resist 99.8 5.4E-19 1.2E-23 164.6 24.1 164 67-238 23-187 (394)
56 TIGR00885 fucP L-fucose:H+ sym 99.8 6.1E-19 1.3E-23 164.7 23.8 170 55-231 6-203 (410)
57 PRK10504 putative transporter; 99.8 3.3E-18 7.1E-23 163.1 27.9 172 57-236 15-187 (471)
58 PRK03633 putative MFS family t 99.8 3E-18 6.6E-23 158.8 25.2 148 55-209 9-156 (381)
59 PRK10473 multidrug efflux syst 99.8 1.8E-18 3.9E-23 161.0 23.4 158 72-237 23-181 (392)
60 PRK11195 lysophospholipid tran 99.8 1.4E-18 3E-23 161.7 21.1 145 89-238 33-177 (393)
61 PRK11102 bicyclomycin/multidru 99.8 1.6E-18 3.5E-23 160.3 21.1 161 70-238 9-170 (377)
62 TIGR00892 2A0113 monocarboxyla 99.8 1.9E-18 4.1E-23 163.8 21.9 157 69-234 36-193 (455)
63 PRK05122 major facilitator sup 99.8 2.3E-18 5E-23 160.6 21.3 159 62-228 25-192 (399)
64 PRK12382 putative transporter; 99.8 7.9E-18 1.7E-22 156.6 24.4 150 67-224 30-188 (392)
65 PRK11646 multidrug resistance 99.8 1.1E-17 2.5E-22 155.9 23.6 146 89-236 41-187 (400)
66 TIGR00899 2A0120 sugar efflux 99.8 1.1E-17 2.3E-22 154.5 23.1 171 61-239 6-181 (375)
67 TIGR00896 CynX cyanate transpo 99.8 1.2E-17 2.6E-22 153.4 21.2 149 69-226 17-166 (355)
68 PRK10054 putative transporter; 99.8 1.5E-17 3.2E-22 154.9 22.0 147 89-237 38-185 (395)
69 PRK09874 drug efflux system pr 99.8 3.9E-17 8.4E-22 152.6 24.4 169 60-237 22-196 (408)
70 PRK10642 proline/glycine betai 99.8 2E-17 4.2E-22 158.4 21.1 176 89-268 281-459 (490)
71 COG2223 NarK Nitrate/nitrite t 99.8 1E-17 2.2E-22 149.8 17.5 216 71-345 33-255 (417)
72 TIGR00897 2A0118 polyol permea 99.8 3.5E-17 7.6E-22 152.8 21.4 134 89-223 43-181 (402)
73 cd06174 MFS The Major Facilita 99.8 3.6E-17 7.8E-22 149.0 21.0 170 58-235 5-174 (352)
74 PRK10489 enterobactin exporter 99.8 9E-18 1.9E-22 157.6 16.3 162 69-238 34-200 (417)
75 TIGR00883 2A0106 metabolite-pr 99.8 3.6E-17 7.9E-22 151.5 20.2 149 91-239 27-195 (394)
76 PF06609 TRI12: Fungal trichot 99.8 2.8E-17 6.2E-22 156.4 18.1 185 46-240 38-222 (599)
77 COG0738 FucP Fucose permease [ 99.8 2.1E-16 4.6E-21 140.5 21.6 228 55-338 16-266 (422)
78 PTZ00207 hypothetical protein; 99.7 2.1E-16 4.6E-21 151.3 22.0 144 89-236 57-207 (591)
79 PRK11128 putative 3-phenylprop 99.7 6.1E-16 1.3E-20 143.5 21.1 163 62-236 14-180 (382)
80 KOG2504 Monocarboxylate transp 99.7 1.1E-16 2.5E-21 151.7 16.0 163 62-234 57-220 (509)
81 TIGR00902 2A0127 phenyl propri 99.7 9.5E-16 2.1E-20 142.2 21.4 156 59-224 11-168 (382)
82 PRK08633 2-acyl-glycerophospho 99.7 6.2E-16 1.3E-20 162.8 22.6 148 92-239 45-204 (1146)
83 KOG2615 Permease of the major 99.7 2E-16 4.4E-21 139.0 15.3 148 90-238 64-217 (451)
84 PRK11010 ampG muropeptide tran 99.7 2.3E-15 5.1E-20 143.8 23.5 169 61-238 21-198 (491)
85 PRK06814 acylglycerophosphoeth 99.7 8.7E-16 1.9E-20 161.4 21.9 145 93-238 51-198 (1140)
86 TIGR00901 2A0125 AmpG-related 99.7 1E-15 2.3E-20 140.5 19.6 158 70-237 6-181 (356)
87 PRK11902 ampG muropeptide tran 99.7 2.5E-15 5.5E-20 140.3 21.6 169 61-238 8-185 (402)
88 PRK10207 dipeptide/tripeptide 99.7 7.9E-16 1.7E-20 146.6 18.4 146 89-235 45-194 (489)
89 KOG3764 Vesicular amine transp 99.7 1.6E-16 3.4E-21 140.6 11.8 145 89-234 101-246 (464)
90 TIGR00924 yjdL_sub1_fam amino 99.7 1.6E-15 3.5E-20 144.3 19.0 145 89-234 43-191 (475)
91 COG2807 CynX Cyanate permease 99.7 1E-14 2.2E-19 128.1 22.3 232 55-346 15-246 (395)
92 PRK15011 sugar efflux transpor 99.7 2.1E-14 4.5E-19 133.8 24.3 148 89-238 46-198 (393)
93 TIGR00882 2A0105 oligosacchari 99.7 1.4E-14 2.9E-19 135.1 22.3 157 68-234 18-182 (396)
94 TIGR00880 2_A_01_02 Multidrug 99.7 2.4E-15 5.3E-20 118.2 13.8 136 100-236 4-140 (141)
95 PRK09584 tppB putative tripept 99.6 2E-14 4.2E-19 137.7 18.2 141 89-230 52-196 (500)
96 PRK09528 lacY galactoside perm 99.6 7.5E-14 1.6E-18 131.2 20.7 143 89-235 41-191 (420)
97 TIGR01299 synapt_SV2 synaptic 99.6 3.5E-14 7.7E-19 140.0 18.7 141 96-238 597-737 (742)
98 PRK15011 sugar efflux transpor 99.6 2.1E-13 4.6E-18 127.0 22.6 146 89-236 247-392 (393)
99 PRK15462 dipeptide/tripeptide 99.6 1.1E-13 2.4E-18 130.6 19.6 144 89-233 40-187 (493)
100 PRK09528 lacY galactoside perm 99.6 3.3E-14 7.2E-19 133.6 15.0 147 90-237 258-406 (420)
101 PRK11551 putative 3-hydroxyphe 99.6 7.3E-14 1.6E-18 130.5 16.9 146 89-234 250-395 (406)
102 TIGR00890 2A0111 Oxalate/Forma 99.6 8.9E-14 1.9E-18 128.0 15.8 139 89-228 235-375 (377)
103 PRK05122 major facilitator sup 99.6 4.1E-13 8.8E-18 125.3 20.2 141 95-236 250-390 (399)
104 cd06174 MFS The Major Facilita 99.5 2.9E-13 6.2E-18 123.3 17.5 160 68-234 191-351 (352)
105 TIGR00889 2A0110 nucleoside tr 99.5 2.8E-13 6.2E-18 127.0 17.2 147 91-237 248-405 (418)
106 TIGR01301 GPH_sucrose GPH fami 99.5 5E-13 1.1E-17 125.6 18.8 150 89-238 34-222 (477)
107 TIGR00899 2A0120 sugar efflux 99.5 1.4E-12 3E-17 120.4 21.4 146 89-236 230-375 (375)
108 PRK09556 uhpT sugar phosphate 99.5 8.9E-13 1.9E-17 125.6 18.6 156 71-233 277-447 (467)
109 PRK12382 putative transporter; 99.5 1.3E-12 2.8E-17 121.7 18.8 137 96-233 251-387 (392)
110 TIGR00902 2A0127 phenyl propri 99.5 2.4E-12 5.2E-17 119.4 20.3 140 89-231 235-375 (382)
111 TIGR00892 2A0113 monocarboxyla 99.5 9.3E-13 2E-17 125.0 17.7 142 89-230 271-416 (455)
112 PRK03699 putative transporter; 99.5 2.2E-12 4.7E-17 120.2 18.5 158 72-237 225-382 (394)
113 PF05977 MFS_3: Transmembrane 99.5 8.6E-12 1.9E-16 119.2 22.6 177 43-234 8-189 (524)
114 TIGR02718 sider_RhtX_FptX side 99.5 8.8E-12 1.9E-16 116.0 22.3 174 55-236 4-185 (390)
115 TIGR00889 2A0110 nucleoside tr 99.5 3E-12 6.5E-17 120.1 19.2 142 89-238 33-183 (418)
116 TIGR00891 2A0112 putative sial 99.5 1.5E-12 3.3E-17 121.2 15.5 131 89-219 269-400 (405)
117 PRK09874 drug efflux system pr 99.5 2.8E-12 6.2E-17 119.8 17.3 138 95-233 259-396 (408)
118 TIGR00893 2A0114 d-galactonate 99.5 2E-12 4.4E-17 119.6 16.0 143 89-232 246-396 (399)
119 PRK09952 shikimate transporter 99.5 6.2E-12 1.3E-16 118.8 19.5 149 89-237 281-435 (438)
120 PRK03633 putative MFS family t 99.5 7E-12 1.5E-16 116.3 19.3 141 89-233 230-370 (381)
121 TIGR00792 gph sugar (Glycoside 99.4 9.2E-13 2E-17 124.3 12.1 149 89-237 30-197 (437)
122 PRK11273 glpT sn-glycerol-3-ph 99.4 1.3E-11 2.8E-16 117.2 19.3 156 72-234 273-434 (452)
123 PRK09705 cynX putative cyanate 99.4 1.4E-11 3E-16 114.8 18.8 149 89-239 235-386 (393)
124 TIGR00883 2A0106 metabolite-pr 99.4 3.5E-12 7.6E-17 118.1 14.8 137 89-225 250-391 (394)
125 PRK03545 putative arabinose tr 99.4 1.4E-11 3.1E-16 114.5 18.9 142 89-233 236-378 (390)
126 TIGR00879 SP MFS transporter, 99.4 4.8E-12 1E-16 120.3 16.0 148 89-237 314-473 (481)
127 KOG2325 Predicted transporter/ 99.4 2.1E-11 4.5E-16 113.0 19.2 190 40-239 26-234 (488)
128 PRK03893 putative sialic acid 99.4 3.5E-12 7.7E-17 122.4 14.4 137 89-226 306-444 (496)
129 TIGR00897 2A0118 polyol permea 99.4 2.3E-11 4.9E-16 113.7 19.3 152 73-234 243-400 (402)
130 KOG3626 Organic anion transpor 99.4 2.1E-12 4.5E-17 124.4 11.7 264 53-348 98-432 (735)
131 PRK10489 enterobactin exporter 99.4 2.3E-11 4.9E-16 114.2 18.2 149 89-238 254-403 (417)
132 PRK11128 putative 3-phenylprop 99.4 6.4E-11 1.4E-15 109.9 20.3 138 89-229 235-373 (382)
133 PRK10077 xylE D-xylose transpo 99.4 3.8E-11 8.3E-16 114.7 19.0 149 89-238 301-461 (479)
134 PF03137 OATP: Organic Anion T 99.4 4.5E-14 9.6E-19 135.2 -1.4 259 58-341 9-338 (539)
135 PF11700 ATG22: Vacuole efflux 99.4 7.3E-11 1.6E-15 111.6 20.3 148 89-236 312-469 (477)
136 TIGR00882 2A0105 oligosacchari 99.4 2.2E-11 4.8E-16 113.5 16.7 140 90-230 250-390 (396)
137 PF05977 MFS_3: Transmembrane 99.4 2.8E-11 6.1E-16 115.6 17.6 152 73-231 239-390 (524)
138 PRK11010 ampG muropeptide tran 99.3 1.3E-10 2.8E-15 111.3 20.5 148 89-237 253-405 (491)
139 TIGR00895 2A0115 benzoate tran 99.3 2.5E-11 5.4E-16 112.6 15.2 118 89-206 280-397 (398)
140 PRK12307 putative sialic acid 99.3 1E-10 2.2E-15 110.1 18.8 129 89-218 261-391 (426)
141 PRK11663 regulatory protein Uh 99.3 1.1E-10 2.4E-15 110.2 18.8 155 71-232 262-421 (434)
142 PRK10054 putative transporter; 99.3 4.6E-11 1E-15 111.3 15.8 142 89-232 239-381 (395)
143 TIGR00898 2A0119 cation transp 99.3 1E-10 2.3E-15 112.5 18.5 136 100-238 361-498 (505)
144 KOG2504 Monocarboxylate transp 99.3 3.7E-11 8.1E-16 114.3 14.9 171 58-235 304-476 (509)
145 TIGR00887 2A0109 phosphate:H+ 99.3 6.4E-11 1.4E-15 113.9 16.5 139 101-239 342-493 (502)
146 TIGR00792 gph sugar (Glycoside 99.3 5.6E-10 1.2E-14 105.4 22.1 119 92-210 255-381 (437)
147 PRK10406 alpha-ketoglutarate t 99.3 2.7E-10 5.9E-15 107.5 19.2 146 89-235 274-424 (432)
148 PRK10504 putative transporter; 99.3 2.6E-10 5.6E-15 108.8 19.2 122 89-210 292-416 (471)
149 TIGR01272 gluP glucose/galacto 99.3 5E-10 1.1E-14 100.7 19.9 131 89-223 173-303 (310)
150 COG2270 Permeases of the major 99.3 6.7E-11 1.5E-15 106.5 13.9 149 89-237 283-431 (438)
151 TIGR00900 2A0121 H+ Antiporter 99.3 5.2E-11 1.1E-15 109.2 13.5 122 89-210 242-364 (365)
152 PRK09669 putative symporter Ya 99.3 4.6E-11 1E-15 113.1 12.9 148 89-236 40-206 (444)
153 PF03825 Nuc_H_symport: Nucleo 99.3 7.3E-10 1.6E-14 102.8 20.3 218 68-340 18-239 (400)
154 PRK15075 citrate-proton sympor 99.3 5.1E-10 1.1E-14 105.7 19.3 136 71-213 257-397 (434)
155 PF01306 LacY_symp: LacY proto 99.3 5.8E-10 1.3E-14 102.2 18.6 182 46-236 218-402 (412)
156 COG2814 AraJ Arabinose efflux 99.3 4.9E-10 1.1E-14 101.7 17.9 142 89-233 242-384 (394)
157 PLN00028 nitrate transmembrane 99.3 1.3E-10 2.8E-15 111.0 14.8 144 89-235 283-433 (476)
158 TIGR02718 sider_RhtX_FptX side 99.2 7.5E-10 1.6E-14 103.0 19.5 141 89-230 238-386 (390)
159 COG2271 UhpC Sugar phosphate p 99.2 1.7E-10 3.6E-15 103.9 14.0 170 55-231 255-430 (448)
160 TIGR00881 2A0104 phosphoglycer 99.2 9.7E-11 2.1E-15 107.9 12.7 128 89-217 247-379 (379)
161 COG3104 PTR2 Dipeptide/tripept 99.2 1.8E-10 3.8E-15 106.0 13.9 146 89-235 56-206 (498)
162 PF05631 DUF791: Protein of un 99.2 1.6E-09 3.6E-14 96.2 19.1 149 89-238 64-220 (354)
163 KOG2563 Permease of the major 99.2 1.5E-09 3.3E-14 98.4 18.9 158 45-210 38-203 (480)
164 TIGR00788 fbt folate/biopterin 99.2 4.9E-10 1.1E-14 106.6 15.7 169 60-238 34-212 (468)
165 PF13347 MFS_2: MFS/sugar tran 99.2 4.9E-11 1.1E-15 112.4 8.8 204 89-335 32-256 (428)
166 TIGR02332 HpaX 4-hydroxyphenyl 99.2 2.1E-10 4.5E-15 107.5 13.0 149 71-224 261-410 (412)
167 PRK10213 nepI ribonucleoside t 99.2 2.6E-09 5.6E-14 99.6 19.9 138 89-228 247-384 (394)
168 PRK10091 MFS transport protein 99.2 1.3E-09 2.8E-14 101.2 17.8 140 89-230 230-371 (382)
169 TIGR00712 glpT glycerol-3-phos 99.2 4.2E-10 9.2E-15 106.4 14.5 148 89-237 282-436 (438)
170 PRK09848 glucuronide transport 99.2 6.8E-09 1.5E-13 98.4 22.6 121 89-209 259-388 (448)
171 PRK08633 2-acyl-glycerophospho 99.2 1E-09 2.3E-14 115.9 18.7 138 89-226 263-401 (1146)
172 PRK11646 multidrug resistance 99.2 1.2E-09 2.7E-14 101.9 17.2 141 90-230 239-383 (400)
173 TIGR00894 2A0114euk Na(+)-depe 99.2 6.2E-10 1.3E-14 106.1 14.2 159 69-234 278-449 (465)
174 KOG0253 Synaptic vesicle trans 99.1 1.9E-10 4.1E-15 101.4 9.3 133 103-238 390-522 (528)
175 PF03825 Nuc_H_symport: Nucleo 99.1 8.7E-09 1.9E-13 95.7 20.8 148 89-236 237-397 (400)
176 TIGR00896 CynX cyanate transpo 99.1 1.7E-09 3.7E-14 99.3 15.9 125 89-214 227-353 (355)
177 KOG0569 Permease of the major 99.1 1.9E-09 4.1E-14 100.8 16.1 148 89-238 300-458 (485)
178 PRK06814 acylglycerophosphoeth 99.1 7.9E-10 1.7E-14 116.7 15.3 138 89-226 256-413 (1140)
179 PRK15402 multidrug efflux syst 99.1 5.2E-09 1.1E-13 97.9 19.3 136 89-226 246-386 (406)
180 PRK11902 ampG muropeptide tran 99.1 5.1E-09 1.1E-13 97.9 19.0 140 89-233 240-388 (402)
181 PRK10429 melibiose:sodium symp 99.1 1.6E-08 3.5E-13 96.6 22.4 118 92-209 264-393 (473)
182 PRK10429 melibiose:sodium symp 99.1 8.7E-10 1.9E-14 105.3 12.1 149 89-237 37-204 (473)
183 PRK11195 lysophospholipid tran 99.1 1.1E-08 2.3E-13 95.4 18.4 132 89-223 236-368 (393)
184 PRK11462 putative transporter; 99.1 6.4E-09 1.4E-13 98.8 17.2 143 89-231 40-200 (460)
185 PF06813 Nodulin-like: Nodulin 99.1 6.8E-09 1.5E-13 89.2 15.6 160 69-238 19-185 (250)
186 TIGR00711 efflux_EmrB drug res 99.1 3.6E-09 7.8E-14 101.2 15.6 121 89-209 286-410 (485)
187 TIGR00710 efflux_Bcr_CflA drug 99.1 1.2E-08 2.5E-13 94.5 18.5 127 89-218 237-369 (385)
188 TIGR00903 2A0129 major facilit 99.0 1.1E-08 2.4E-13 94.3 16.9 151 72-236 212-366 (368)
189 PRK10133 L-fucose transporter; 99.0 1.5E-08 3.2E-13 95.8 18.0 136 89-228 290-426 (438)
190 PF01770 Folate_carrier: Reduc 99.0 8.9E-08 1.9E-12 87.5 21.7 239 88-338 34-277 (412)
191 PRK14995 methyl viologen resis 99.0 6.8E-09 1.5E-13 99.7 15.4 120 89-208 290-412 (495)
192 PF01306 LacY_symp: LacY proto 99.0 9.6E-09 2.1E-13 94.3 15.5 141 89-233 38-186 (412)
193 TIGR00901 2A0125 AmpG-related 99.0 6E-09 1.3E-13 95.6 14.1 105 89-193 239-355 (356)
194 COG2223 NarK Nitrate/nitrite t 99.0 2.2E-09 4.7E-14 96.8 10.2 150 73-233 239-399 (417)
195 PRK09669 putative symporter Ya 99.0 1.1E-07 2.3E-12 90.2 22.2 117 94-210 264-389 (444)
196 PRK10473 multidrug efflux syst 99.0 2.2E-08 4.8E-13 93.2 17.2 129 89-223 234-362 (392)
197 PF07690 MFS_1: Major Facilita 99.0 5.2E-09 1.1E-13 95.4 12.2 112 89-200 237-352 (352)
198 KOG4686 Predicted sugar transp 99.0 1E-08 2.2E-13 87.6 12.4 125 89-215 295-420 (459)
199 PRK15034 nitrate/nitrite trans 99.0 2.5E-08 5.5E-13 93.5 15.5 134 100-233 292-452 (462)
200 COG2807 CynX Cyanate permease 98.9 1.3E-07 2.8E-12 83.9 17.5 178 44-233 204-383 (395)
201 KOG3762 Predicted transporter 98.9 4.1E-09 8.8E-14 97.5 7.5 145 89-234 401-546 (618)
202 PF13347 MFS_2: MFS/sugar tran 98.9 3.5E-08 7.5E-13 93.1 14.1 115 94-208 260-383 (428)
203 PRK11043 putative transporter; 98.9 2.5E-07 5.4E-12 86.4 19.4 120 89-209 233-357 (401)
204 TIGR00924 yjdL_sub1_fam amino 98.9 1.6E-07 3.4E-12 89.7 18.3 137 96-233 314-466 (475)
205 COG0477 ProP Permeases of the 98.9 1.3E-07 2.8E-12 83.7 16.7 133 94-226 39-176 (338)
206 TIGR00885 fucP L-fucose:H+ sym 98.8 2.4E-07 5.1E-12 86.8 18.2 131 90-223 265-400 (410)
207 COG2211 MelB Na+/melibiose sym 98.8 2.1E-06 4.5E-11 80.0 22.9 120 89-208 267-395 (467)
208 PRK11102 bicyclomycin/multidru 98.8 3.3E-07 7.1E-12 84.7 18.0 115 89-204 225-344 (377)
209 KOG4686 Predicted sugar transp 98.8 5.4E-09 1.2E-13 89.2 5.2 121 89-209 74-198 (459)
210 TIGR00788 fbt folate/biopterin 98.8 1.1E-07 2.5E-12 90.4 14.9 147 89-236 283-447 (468)
211 PRK09848 glucuronide transport 98.8 1.9E-07 4.1E-12 88.6 16.0 117 89-205 39-173 (448)
212 KOG2532 Permease of the major 98.8 3.8E-08 8.3E-13 92.8 11.0 175 54-234 260-446 (466)
213 KOG2816 Predicted transporter 98.8 2.4E-07 5.1E-12 87.2 16.2 131 102-238 70-203 (463)
214 PRK09584 tppB putative tripept 98.8 4.4E-07 9.6E-12 87.2 18.3 136 96-231 318-475 (500)
215 TIGR01272 gluP glucose/galacto 98.8 2.1E-07 4.5E-12 83.8 14.8 92 143-234 6-112 (310)
216 COG2211 MelB Na+/melibiose sym 98.8 2.9E-07 6.2E-12 85.6 15.7 149 89-237 43-210 (467)
217 PF03209 PUCC: PUCC protein; 98.8 1.5E-06 3.2E-11 78.9 19.5 143 89-231 239-394 (403)
218 PRK11462 putative transporter; 98.7 4E-06 8.7E-11 79.8 22.1 115 94-208 263-386 (460)
219 PRK11652 emrD multidrug resist 98.7 3.6E-06 7.8E-11 78.4 21.4 120 89-209 238-360 (394)
220 TIGR00926 2A1704 Peptide:H+ sy 98.7 4.1E-06 8.8E-11 82.4 22.0 145 89-233 18-180 (654)
221 KOG0252 Inorganic phosphate tr 98.7 1.3E-08 2.9E-13 92.5 4.3 177 55-239 307-502 (538)
222 PRK10207 dipeptide/tripeptide 98.7 1.5E-06 3.3E-11 83.1 17.6 138 96-233 311-474 (489)
223 PF11700 ATG22: Vacuole efflux 98.6 1.9E-05 4.1E-10 75.1 23.8 146 94-239 70-252 (477)
224 KOG3764 Vesicular amine transp 98.6 9.3E-08 2E-12 85.6 7.7 158 65-229 283-448 (464)
225 PF03209 PUCC: PUCC protein; 98.6 5.3E-06 1.1E-10 75.4 17.9 126 89-215 10-157 (403)
226 PF06609 TRI12: Fungal trichot 98.5 3.4E-06 7.4E-11 81.3 15.7 147 95-241 350-560 (599)
227 COG0738 FucP Fucose permease [ 98.5 6.2E-06 1.3E-10 74.4 15.6 157 60-226 244-400 (422)
228 TIGR01301 GPH_sucrose GPH fami 98.5 1.6E-05 3.4E-10 75.4 19.2 141 98-238 309-475 (477)
229 TIGR00886 2A0108 nitrite extru 98.5 5.1E-07 1.1E-11 83.0 8.4 106 89-195 256-365 (366)
230 PF05978 UNC-93: Ion channel r 98.4 1.4E-05 3E-10 63.6 14.4 107 100-207 43-149 (156)
231 PTZ00207 hypothetical protein; 98.4 7.4E-06 1.6E-10 79.3 14.9 141 99-241 396-559 (591)
232 KOG0254 Predicted transporter 98.4 2.1E-05 4.6E-10 76.0 18.0 141 97-239 332-488 (513)
233 PF06779 DUF1228: Protein of u 98.3 2.4E-06 5.2E-11 60.0 7.0 80 64-150 4-83 (85)
234 PF00083 Sugar_tr: Sugar (and 98.3 1.9E-09 4.1E-14 102.2 -13.3 137 102-239 294-441 (451)
235 PRK15403 multidrug efflux syst 98.2 0.00017 3.8E-09 67.6 19.8 135 89-226 249-388 (413)
236 TIGR00769 AAA ADP/ATP carrier 98.2 0.0015 3.3E-08 61.8 25.5 116 92-207 41-189 (472)
237 KOG0255 Synaptic vesicle trans 98.2 0.00021 4.5E-09 69.3 20.2 133 105-239 361-497 (521)
238 PF03092 BT1: BT1 family; Int 98.2 3.6E-05 7.8E-10 72.6 14.2 144 89-234 20-174 (433)
239 KOG2816 Predicted transporter 98.2 0.0002 4.4E-09 67.6 18.0 119 89-208 272-391 (463)
240 PRK15462 dipeptide/tripeptide 98.1 0.00026 5.6E-09 67.5 17.2 140 95-234 309-478 (493)
241 KOG2615 Permease of the major 98.1 6.2E-05 1.3E-09 67.5 11.5 120 89-208 292-413 (451)
242 PF12832 MFS_1_like: MFS_1 lik 98.0 4.8E-05 1E-09 52.9 7.6 65 62-133 10-74 (77)
243 KOG2533 Permease of the major 98.0 8.7E-05 1.9E-09 70.6 11.7 160 55-221 276-442 (495)
244 KOG0637 Sucrose transporter an 97.9 4.9E-05 1.1E-09 69.7 9.1 118 89-206 62-202 (498)
245 COG2270 Permeases of the major 97.9 0.0014 3.1E-08 59.9 17.8 147 92-238 56-224 (438)
246 PF00854 PTR2: POT family; In 97.9 0.00012 2.6E-09 67.7 10.7 109 125-234 2-122 (372)
247 PRK03612 spermidine synthase; 97.8 0.0046 1E-07 59.6 21.3 118 89-208 45-170 (521)
248 PF02487 CLN3: CLN3 protein; 97.8 0.00041 9E-09 63.8 13.0 111 92-206 279-394 (402)
249 PF02487 CLN3: CLN3 protein; 97.8 0.00054 1.2E-08 63.0 13.1 136 96-236 61-197 (402)
250 PF03092 BT1: BT1 family; Int 97.7 0.0025 5.3E-08 60.2 16.4 149 90-238 251-416 (433)
251 COG3104 PTR2 Dipeptide/tripept 97.5 0.0039 8.4E-08 58.3 14.7 137 94-231 324-483 (498)
252 KOG3098 Uncharacterized conser 97.5 0.0041 8.9E-08 58.3 14.3 107 100-207 56-162 (461)
253 TIGR00939 2a57 Equilibrative N 97.4 0.004 8.7E-08 58.6 13.6 133 102-239 53-200 (437)
254 COG3202 ATP/ADP translocase [E 97.4 0.12 2.7E-06 48.5 23.9 118 92-209 59-210 (509)
255 KOG3098 Uncharacterized conser 97.4 0.037 8E-07 52.1 19.3 109 96-205 281-410 (461)
256 KOG3810 Micronutrient transpor 97.4 0.001 2.2E-08 59.1 8.5 230 89-341 36-267 (433)
257 KOG1237 H+/oligopeptide sympor 97.1 0.01 2.2E-07 57.7 13.6 144 89-233 68-243 (571)
258 PF06963 FPN1: Ferroportin1 (F 97.0 0.022 4.9E-07 53.3 14.1 117 89-205 288-414 (432)
259 KOG2563 Permease of the major 97.0 0.0016 3.5E-08 60.0 6.3 147 90-236 297-451 (480)
260 PF06963 FPN1: Ferroportin1 (F 97.0 0.31 6.6E-06 45.9 21.0 132 96-229 40-194 (432)
261 KOG4332 Predicted sugar transp 96.9 0.0027 5.8E-08 54.6 6.4 84 89-176 67-154 (454)
262 PF03219 TLC: TLC ATP/ADP tran 96.9 0.46 1E-05 45.5 26.6 117 92-208 56-205 (491)
263 KOG1479 Nucleoside transporter 96.7 0.088 1.9E-06 48.5 15.0 87 147-238 117-207 (406)
264 KOG3574 Acetyl-CoA transporter 96.6 0.093 2E-06 47.7 14.2 138 59-206 38-192 (510)
265 PF13000 Acatn: Acetyl-coenzym 96.6 0.051 1.1E-06 51.1 13.0 146 57-207 5-178 (544)
266 TIGR00939 2a57 Equilibrative N 96.3 0.21 4.5E-06 47.2 15.4 109 97-206 310-431 (437)
267 PF03137 OATP: Organic Anion T 95.4 0.0043 9.2E-08 60.1 0.0 150 55-210 308-515 (539)
268 KOG3762 Predicted transporter 95.4 0.011 2.5E-07 55.7 2.7 77 61-144 20-97 (618)
269 KOG1330 Sugar transporter/spin 95.3 0.018 3.9E-07 53.4 3.8 125 90-214 279-417 (493)
270 KOG2325 Predicted transporter/ 94.8 0.045 9.7E-07 51.7 5.0 73 155-228 396-468 (488)
271 KOG1479 Nucleoside transporter 94.7 0.51 1.1E-05 43.5 11.2 131 72-205 263-401 (406)
272 PF01733 Nucleoside_tran: Nucl 94.1 0.017 3.7E-07 51.9 0.6 108 98-205 186-306 (309)
273 COG4262 Predicted spermidine s 94.1 2.5 5.4E-05 38.2 13.7 85 90-174 39-132 (508)
274 KOG0637 Sucrose transporter an 93.6 0.14 2.9E-06 47.8 5.3 129 98-226 336-487 (498)
275 PF01770 Folate_carrier: Reduc 93.5 2.9 6.4E-05 38.9 13.9 97 92-188 283-381 (412)
276 KOG3097 Predicted membrane pro 92.9 1 2.2E-05 40.3 9.3 104 103-207 67-181 (390)
277 TIGR00805 oat sodium-independe 92.8 0.19 4.2E-06 49.9 5.6 65 70-140 348-415 (633)
278 KOG4332 Predicted sugar transp 92.2 7.2 0.00016 34.2 13.4 135 95-230 283-426 (454)
279 TIGR00769 AAA ADP/ATP carrier 91.0 15 0.00032 35.2 18.5 73 153-226 272-345 (472)
280 PF07672 MFS_Mycoplasma: Mycop 88.7 5.2 0.00011 34.7 9.6 103 97-200 144-256 (267)
281 COG5336 Uncharacterized protei 86.1 3.7 8E-05 30.0 6.1 26 96-121 44-69 (116)
282 TIGR00880 2_A_01_02 Multidrug 85.2 7.6 0.00017 29.1 8.4 40 94-133 87-126 (141)
283 PF03219 TLC: TLC ATP/ADP tran 85.2 37 0.0008 32.7 18.9 72 153-225 288-360 (491)
284 PF13000 Acatn: Acetyl-coenzym 84.3 13 0.00028 35.6 10.5 62 149-210 407-468 (544)
285 KOG3880 Predicted small molecu 84.2 6 0.00013 35.4 7.7 111 94-206 288-401 (409)
286 KOG3880 Predicted small molecu 83.7 0.8 1.7E-05 40.6 2.3 133 96-233 64-197 (409)
287 PRK10263 DNA translocase FtsK; 83.0 44 0.00096 36.0 14.6 26 194-220 142-167 (1355)
288 TIGR00806 rfc RFC reduced fola 82.4 8.4 0.00018 36.8 8.6 93 97-189 301-395 (511)
289 PF07672 MFS_Mycoplasma: Mycop 82.3 1.8 3.8E-05 37.5 3.8 56 179-234 2-61 (267)
290 KOG1237 H+/oligopeptide sympor 80.7 62 0.0013 31.9 14.5 83 127-209 421-520 (571)
291 PF06912 DUF1275: Protein of u 80.6 33 0.00071 28.7 16.3 39 100-138 52-93 (209)
292 PF01733 Nucleoside_tran: Nucl 80.3 0.54 1.2E-05 42.3 0.0 79 155-239 5-88 (309)
293 PHA03237 envelope glycoprotein 79.0 36 0.00078 31.8 11.2 33 144-176 248-280 (424)
294 PRK14229 camphor resistance pr 77.6 26 0.00057 25.9 9.1 48 130-177 32-79 (108)
295 PF07857 DUF1632: CEO family ( 76.5 12 0.00025 32.5 7.0 23 215-237 116-138 (254)
296 PHA03242 envelope glycoprotein 75.4 73 0.0016 29.9 12.1 52 144-195 245-300 (428)
297 PF01528 Herpes_glycop: Herpes 73.7 37 0.0008 31.3 9.7 34 144-177 231-264 (374)
298 PF11947 DUF3464: Protein of u 73.2 32 0.0007 27.2 8.0 51 146-199 96-146 (153)
299 COG3202 ATP/ADP translocase [E 70.8 1E+02 0.0022 29.6 17.9 78 152-230 289-368 (509)
300 PRK14233 camphor resistance pr 67.3 56 0.0012 25.2 9.8 74 103-176 9-92 (133)
301 PRK14230 camphor resistance pr 66.0 55 0.0012 24.7 10.0 74 103-176 8-82 (119)
302 TIGR00844 c_cpa1 na(+)/h(+) an 63.1 1.7E+02 0.0037 30.1 12.6 36 189-225 107-142 (810)
303 PF02632 BioY: BioY family; I 62.4 70 0.0015 25.2 8.1 26 100-125 59-84 (148)
304 KOG3810 Micronutrient transpor 61.4 31 0.00067 31.6 6.5 92 97-188 274-367 (433)
305 TIGR01666 YCCS hypothetical me 61.0 1.2E+02 0.0026 30.8 11.4 44 121-164 54-98 (704)
306 TIGR00926 2A1704 Peptide:H+ sy 60.3 88 0.0019 31.5 10.3 60 147-206 565-624 (654)
307 TIGR01667 YCCS_YHJK integral m 59.2 1.5E+02 0.0034 30.1 11.8 44 121-164 54-98 (701)
308 KOG3574 Acetyl-CoA transporter 59.1 49 0.0011 30.8 7.4 61 150-210 372-432 (510)
309 PF03547 Mem_trans: Membrane t 57.7 1.2E+02 0.0025 28.0 10.3 17 106-122 7-23 (385)
310 COG1268 BioY Uncharacterized c 55.8 57 0.0012 26.8 6.7 24 100-123 88-111 (184)
311 PHA03239 envelope glycoprotein 54.1 1.9E+02 0.0041 27.3 10.5 34 144-177 254-287 (429)
312 TIGR02230 ATPase_gene1 F0F1-AT 52.1 91 0.002 22.7 6.7 29 105-133 54-82 (100)
313 PTZ00265 multidrug resistance 50.9 4.1E+02 0.0088 29.9 20.5 19 212-230 196-214 (1466)
314 PRK14220 camphor resistance pr 49.2 1.1E+02 0.0025 23.0 10.1 74 103-176 6-84 (120)
315 PF11299 DUF3100: Protein of u 49.1 27 0.00058 29.6 3.9 95 89-206 134-229 (241)
316 PRK14200 camphor resistance pr 47.9 1.2E+02 0.0027 23.1 10.9 74 103-176 10-91 (127)
317 PRK14215 camphor resistance pr 47.8 1.2E+02 0.0027 23.1 10.6 73 103-176 7-88 (126)
318 PRK14211 camphor resistance pr 46.5 1.2E+02 0.0026 22.6 10.0 74 103-176 6-80 (114)
319 PRK14218 camphor resistance pr 45.9 1.4E+02 0.003 23.1 10.9 73 103-176 13-94 (133)
320 COG4177 LivM ABC-type branched 43.7 2.5E+02 0.0054 25.4 12.8 56 148-208 209-268 (314)
321 PF10225 DUF2215: Uncharacteri 43.1 2.2E+02 0.0048 24.6 10.0 6 172-177 57-62 (249)
322 PRK14219 camphor resistance pr 43.0 1.5E+02 0.0033 22.8 11.1 73 103-176 6-87 (132)
323 PLN02332 membrane bound O-acyl 43.0 2.7E+02 0.006 26.7 10.3 30 122-151 339-368 (465)
324 PF06779 DUF1228: Protein of u 42.5 1.2E+02 0.0026 21.4 9.5 70 158-231 5-74 (85)
325 PRK10692 hypothetical protein; 40.7 1.2E+02 0.0025 21.4 5.3 19 123-141 3-21 (92)
326 COG1288 Predicted membrane pro 40.6 3.3E+02 0.0071 25.9 10.7 38 191-229 196-234 (481)
327 PF12805 FUSC-like: FUSC-like 40.3 2.6E+02 0.0056 24.6 14.0 36 128-163 3-39 (284)
328 PF02694 UPF0060: Uncharacteri 39.7 50 0.0011 24.3 3.6 50 94-143 54-103 (107)
329 PRK14205 camphor resistance pr 39.5 1.6E+02 0.0036 22.1 9.8 75 103-177 7-84 (118)
330 PRK02237 hypothetical protein; 39.1 78 0.0017 23.3 4.5 49 95-143 57-105 (109)
331 PRK14196 chromosome condensati 39.0 1.7E+02 0.0038 22.3 11.1 74 103-176 8-88 (127)
332 PRK14231 camphor resistance pr 38.5 1.8E+02 0.0039 22.3 10.3 74 103-176 6-84 (129)
333 PRK03818 putative transporter; 38.1 4E+02 0.0088 26.2 11.1 81 94-175 435-516 (552)
334 PF06341 DUF1056: Protein of u 38.1 1.2E+02 0.0025 20.0 5.6 37 145-182 26-62 (63)
335 PF15188 CCDC-167: Coiled-coil 38.0 1.2E+02 0.0025 21.4 5.1 22 298-319 59-80 (85)
336 TIGR03802 Asp_Ala_antiprt aspa 37.6 4.2E+02 0.009 26.2 11.2 83 95-179 451-534 (562)
337 COG3619 Predicted membrane pro 37.1 2.6E+02 0.0057 23.8 20.4 73 50-123 10-84 (226)
338 PF13829 DUF4191: Domain of un 36.5 1.1E+02 0.0023 26.0 5.6 17 212-228 50-66 (224)
339 PRK14201 camphor resistance pr 35.7 1.9E+02 0.0042 21.8 10.0 47 130-176 33-84 (121)
340 PRK14214 camphor resistance pr 35.7 1.9E+02 0.0041 21.7 10.6 75 103-177 8-85 (118)
341 COG4769 Predicted membrane pro 35.7 1.5E+02 0.0033 23.8 5.9 49 107-161 86-134 (181)
342 PHA03231 glycoprotein BALF4; P 35.6 2E+02 0.0043 29.7 8.2 17 190-206 681-697 (829)
343 COG2233 UraA Xanthine/uracil p 35.6 3.8E+02 0.0082 25.6 9.6 94 89-182 44-140 (451)
344 PRK14202 camphor resistance pr 35.4 2E+02 0.0044 22.0 10.3 74 103-176 11-91 (128)
345 PRK14226 camphor resistance pr 35.4 2.1E+02 0.0044 22.0 10.5 75 102-176 7-92 (130)
346 PF06570 DUF1129: Protein of u 33.4 2.8E+02 0.0062 23.1 12.7 23 212-234 175-197 (206)
347 PRK11469 hypothetical protein; 33.3 2.8E+02 0.006 22.9 10.5 50 91-140 131-181 (188)
348 KOG2881 Predicted membrane pro 33.2 3.3E+02 0.0072 23.8 8.4 15 212-226 128-142 (294)
349 PRK14232 camphor resistance pr 33.1 2.1E+02 0.0046 21.5 10.4 75 103-177 6-83 (120)
350 PF11151 DUF2929: Protein of u 32.9 1.4E+02 0.0029 19.2 5.9 43 194-237 13-55 (57)
351 PRK14213 camphor resistance pr 32.6 2.2E+02 0.0047 21.4 10.8 75 103-177 6-85 (118)
352 PF00854 PTR2: POT family; In 32.6 75 0.0016 29.1 4.7 50 95-144 73-122 (372)
353 PRK04972 putative transporter; 32.2 5.1E+02 0.011 25.6 11.7 111 95-207 63-185 (558)
354 TIGR02978 phageshock_pspC phag 31.9 1.3E+02 0.0028 22.9 4.9 12 229-240 53-64 (121)
355 PF10762 DUF2583: Protein of u 31.4 1.5E+02 0.0033 20.7 4.7 18 123-140 3-20 (89)
356 PF00909 Ammonium_transp: Ammo 31.4 4.4E+02 0.0095 24.6 14.9 51 154-204 277-327 (399)
357 COG0239 CrcB Integral membrane 31.3 2.4E+02 0.0052 21.6 10.8 75 102-176 7-89 (126)
358 PRK14206 camphor resistance pr 30.9 2.4E+02 0.0052 21.5 10.6 75 103-177 6-90 (127)
359 PF10183 ESSS: ESSS subunit of 30.7 2E+02 0.0043 21.1 5.7 27 212-238 58-85 (105)
360 KOG2601 Iron transporter [Inor 30.6 4.6E+02 0.01 24.7 11.7 126 100-226 69-217 (503)
361 PTZ00370 STEVOR; Provisional 30.3 1.2E+02 0.0026 26.7 5.1 23 212-234 256-278 (296)
362 PRK14212 camphor resistance pr 29.2 2.6E+02 0.0057 21.3 10.3 73 103-176 7-88 (128)
363 PF06813 Nodulin-like: Nodulin 29.2 3.4E+02 0.0074 23.5 7.8 41 185-227 39-79 (250)
364 PF02990 EMP70: Endomembrane p 29.0 2.7E+02 0.0058 27.2 7.9 31 178-208 292-322 (521)
365 PRK14199 camphor resistance pr 28.6 2.7E+02 0.0058 21.3 10.4 74 103-176 10-91 (128)
366 KOG2927 Membrane component of 28.6 45 0.00098 30.1 2.3 21 186-206 217-237 (372)
367 PF11712 Vma12: Endoplasmic re 28.4 2.4E+02 0.0052 21.9 6.2 22 95-116 76-97 (142)
368 PRK14234 camphor resistance pr 27.3 2.8E+02 0.0061 21.0 11.2 74 103-176 8-89 (124)
369 TIGR02230 ATPase_gene1 F0F1-AT 26.8 2.6E+02 0.0055 20.4 7.1 28 196-223 56-86 (100)
370 PF06826 Asp-Al_Ex: Predicted 26.6 3.4E+02 0.0075 21.9 12.1 83 93-177 55-138 (169)
371 COG0387 ChaA Ca2+/H+ antiporte 26.2 4.8E+02 0.01 24.1 8.3 12 89-100 251-262 (368)
372 TIGR02865 spore_II_E stage II 26.1 5.1E+02 0.011 26.7 9.6 46 150-196 186-231 (764)
373 PRK11715 inner membrane protei 26.1 5.8E+02 0.013 24.3 11.1 61 122-186 330-390 (436)
374 PRK14217 camphor resistance pr 25.8 3.1E+02 0.0068 21.1 11.6 74 103-176 9-90 (134)
375 PRK14228 camphor resistance pr 25.4 3E+02 0.0065 20.8 11.9 48 130-177 40-87 (122)
376 COG1422 Predicted membrane pro 25.2 4E+02 0.0087 22.2 10.0 25 193-223 32-56 (201)
377 PF04346 EutH: Ethanolamine ut 25.2 5.4E+02 0.012 23.6 14.1 106 97-203 50-161 (354)
378 PF04281 Tom22: Mitochondrial 25.1 2E+02 0.0044 22.3 5.0 23 172-194 60-82 (137)
379 COG3389 Uncharacterized protei 25.1 1.6E+02 0.0034 25.1 4.6 39 101-139 35-73 (277)
380 PF07760 DUF1616: Protein of u 24.7 4.9E+02 0.011 23.0 11.2 57 150-207 22-78 (287)
381 KOG0055 Multidrug/pheromone ex 24.7 9.5E+02 0.021 26.3 19.1 19 212-230 807-825 (1228)
382 PRK14216 camphor resistance pr 24.2 3.4E+02 0.0073 20.9 10.1 75 102-176 11-92 (132)
383 KOG2568 Predicted membrane pro 24.0 6.8E+02 0.015 24.4 10.6 7 212-218 414-420 (518)
384 COG1811 Uncharacterized membra 23.6 3.6E+02 0.0079 22.8 6.5 51 104-154 13-63 (228)
385 PRK14207 camphor resistance pr 23.5 3.3E+02 0.0072 20.6 10.4 75 103-177 9-89 (123)
386 PRK14227 camphor resistance pr 23.5 3.3E+02 0.0072 20.6 10.9 75 103-177 7-89 (124)
387 PF01405 PsbT: Photosystem II 23.5 1.4E+02 0.003 16.2 3.1 8 232-239 21-28 (29)
388 PF13940 Ldr_toxin: Toxin Ldr, 23.4 1.4E+02 0.0031 16.7 2.8 21 100-120 14-34 (35)
389 PRK14198 camphor resistance pr 23.2 3.4E+02 0.0073 20.6 10.6 73 103-176 6-87 (124)
390 PRK14222 camphor resistance pr 23.1 3.4E+02 0.0073 20.6 11.4 73 103-176 7-88 (124)
391 PF12273 RCR: Chitin synthesis 22.9 38 0.00081 26.0 0.7 14 214-227 1-14 (130)
392 TIGR02857 CydD thiol reductant 22.9 7E+02 0.015 24.1 21.4 19 103-121 15-33 (529)
393 TIGR00494 crcB crcB protein. T 22.8 3.3E+02 0.0071 20.3 8.9 25 153-177 61-85 (117)
394 PF06123 CreD: Inner membrane 22.8 6.7E+02 0.014 23.8 11.2 98 128-235 302-399 (430)
395 PRK03818 putative transporter; 21.7 7.8E+02 0.017 24.3 10.9 24 95-118 64-87 (552)
396 PF05631 DUF791: Protein of un 21.2 6.5E+02 0.014 23.2 16.2 104 105-208 174-303 (354)
397 PF04474 DUF554: Protein of un 21.1 3.1E+02 0.0068 23.4 5.9 59 103-162 11-69 (226)
398 PF05232 BTP: Bacterial Transm 21.0 1.3E+02 0.0028 20.0 2.9 36 89-124 29-64 (67)
399 TIGR03644 marine_trans_1 proba 20.9 7.1E+02 0.015 23.4 14.5 48 155-203 297-344 (404)
400 PF14851 FAM176: FAM176 family 20.9 3.1E+02 0.0067 21.8 5.4 28 145-172 16-43 (153)
401 PF11298 DUF3099: Protein of u 20.8 2.6E+02 0.0055 19.1 4.3 30 118-147 11-40 (73)
402 KOG2601 Iron transporter [Inor 20.8 1.2E+02 0.0027 28.2 3.6 54 149-202 388-441 (503)
403 PF15061 DUF4538: Domain of un 20.8 91 0.002 20.1 2.0 20 212-231 4-23 (58)
404 PF10785 NADH-u_ox-rdase: NADH 20.8 3.1E+02 0.0068 19.3 5.8 40 107-146 31-77 (86)
405 PRK11875 psbT photosystem II r 20.4 1.7E+02 0.0037 16.1 2.8 8 232-239 21-28 (31)
406 PRK14208 camphor resistance pr 20.3 4E+02 0.0086 20.3 11.3 73 103-176 7-88 (126)
407 COG1079 Uncharacterized ABC-ty 20.3 6.4E+02 0.014 22.7 12.7 96 107-206 20-117 (304)
408 TIGR00836 amt ammonium transpo 20.3 7.3E+02 0.016 23.3 13.0 50 154-203 282-331 (403)
409 PRK14195 camphor resistance pr 20.1 4E+02 0.0086 20.2 10.6 74 103-177 7-89 (125)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-30 Score=240.89 Aligned_cols=286 Identities=28% Similarity=0.460 Sum_probs=232.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccccccccccCCCCCC-Ccccc--CCh----hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018453 48 SAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSG-ISWYD--LSS----VEIGLITSGSLYGALIGSILAFNIADI 120 (355)
Q Consensus 48 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~s~----~~~~~~~~~~~~~~~~~~~~~g~l~dr 120 (355)
++.....+..+++.+.+||..+.+++....+.+-.... .+.+| .++ ..++.+++++.+|.++|+++.++++||
T Consensus 7 ~~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~ 86 (485)
T KOG0569|consen 7 RRLLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADR 86 (485)
T ss_pred HHHHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34445556777777999999999988766554210000 01133 333 456778899999999999999999999
Q ss_pred hccHHHHHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHH
Q 018453 121 LGRRRELILAALLYLVGALVTALA---PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMV 197 (355)
Q Consensus 121 ~Grr~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~ 197 (355)
+|||..++++.++..++.++..++ +.+.+++++|++.|+..|......+.|+.|..|.+.||....+.+.+..+|.+
T Consensus 87 ~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~l 166 (485)
T KOG0569|consen 87 FGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGIL 166 (485)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHH
Confidence 999999999999988888777654 67899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-hhccccchhHHHHhHHHHHHHHHHHHhhcccchhHHHH-hhccccCchhhhHHHHHHHHHHHhCCCCCCCc
Q 018453 198 GGYGIGSL-LVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLL-CAMKRKGDMQDLRESAISCLCRLRGQSIGDSA 275 (355)
Q Consensus 198 ~~~~i~~~-l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~esp~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (355)
++..++.. +.++...|.+.+.+.++++++.++...++||||||+.. ++ +++||++.++++++++++++.
T Consensus 167 l~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~---------~~~~A~~sl~~y~G~~~~~~~ 237 (485)
T KOG0569|consen 167 LGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKG---------DEEEARKALKFYRGKEDVEAE 237 (485)
T ss_pred HHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcC---------CHHHHHHHHHHHhCCCcchhH
Confidence 99777644 44555579999999999999999999999999999987 44 679999999999999887655
Q ss_pred hhHHHHHHHhhccccccccchhhhhhccc-chhHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHhccccc
Q 018453 276 PTEVDEILTELSYVGEDKEVSLREVFHGK-CLKALIIGAGLVLFQQITGQPSVLYYAASILQDFLQPLM 343 (355)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (355)
.++..++.++.+ .+++++.+++++++++ .++++.+++.+.+.++++|.+.+.+|.+.+++++|-+.+
T Consensus 238 ~e~~~~e~~~~~-~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~ 305 (485)
T KOG0569|consen 238 IEEMLREIEEEE-LEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPE 305 (485)
T ss_pred HHHHHHHHHHhc-cccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHH
Confidence 444433333221 1234678899999997 556888999999999999999999999999999997653
No 2
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.97 E-value=1.4e-28 Score=240.92 Aligned_cols=274 Identities=17% Similarity=0.212 Sum_probs=217.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Q 018453 48 SAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRREL 127 (355)
Q Consensus 48 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~ 127 (355)
+..|.++++++++.+..+++...++..+|.+..+ ++++..+.+++.+++.+|.+++.+++|+++||+|||+.+
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~-------~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~l 235 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKD-------LCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCL 235 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 4456666777888888899998899999988775 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 018453 128 ILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV 207 (355)
Q Consensus 128 ~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 207 (355)
+++.++.+++.++++++++++.++++|++.|++.|+..+....++.|++|+++||+.+++..++..+|.++++.++..+.
T Consensus 236 ii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il 315 (742)
T TIGR01299 236 LICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAII 315 (742)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998887665
Q ss_pred ccc------------cchhHHHHhHHHHHHHHHHHHhhcccchhHHHHhhccccCchhhhHHHHHHHHHHHhCCCCCCC-
Q 018453 208 DLV------------AGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDS- 274 (355)
Q Consensus 208 ~~~------------~~w~~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 274 (355)
... .+||+.+++.++++++.++..+++||||+|+..++ +.+++.++++++++.+....
T Consensus 316 ~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~g---------r~~eA~~iL~~i~~~n~~~~~ 386 (742)
T TIGR01299 316 PHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENG---------KHDEAWMILKLIHDTNMRAKG 386 (742)
T ss_pred HhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCC---------CHHHHHHHHHHHhcCCCCCcC
Confidence 321 26999999988888888777888999999998876 56888899998876543211
Q ss_pred ch-hHH--HHHHHhh------ccccccc-----------------cchhhhhhcccchhHHHHHHHHHHHHhhhhhhHHH
Q 018453 275 AP-TEV--DEILTEL------SYVGEDK-----------------EVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVL 328 (355)
Q Consensus 275 ~~-~~~--~~~~~~~------~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (355)
.+ ... ++.+... +.++... ...++++|+.+.+++++++.+++ +....+.+++.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~w-f~~~~~yygl~ 465 (742)
T TIGR01299 387 HPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVW-FTLSFGYYGLS 465 (742)
T ss_pred chhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 11 100 0100000 0000000 01356677776767776655555 55566799999
Q ss_pred HhHHHHHHHh
Q 018453 329 YYAASILQDF 338 (355)
Q Consensus 329 ~~~~~~~~~~ 338 (355)
.|+|.+++..
T Consensus 466 ~w~P~~~~~~ 475 (742)
T TIGR01299 466 VWFPDMIKHL 475 (742)
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 3
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=4.8e-28 Score=232.52 Aligned_cols=286 Identities=40% Similarity=0.590 Sum_probs=227.9
Q ss_pred chHHHHHHHHHHHHHHHHhhhh--hcccccccccccCCCCCCCccccCCh--hHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018453 46 SVSAAILPFLFPALGGLLYGYD--IGSTSCATISIESPTLSGISWYDLSS--VEIGLITSGSLYGALIGSILAFNIADIL 121 (355)
Q Consensus 46 ~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 121 (355)
.........+...++.+.+|++ .+...+....+.+...... ...+. .+.+++.+...++..+++++.|+++|++
T Consensus 39 ~~~~~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~--~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~ 116 (513)
T KOG0254|consen 39 ISPFVILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYD--LSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRI 116 (513)
T ss_pred CceehHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccc--cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344555667778888888886 6667777776665322211 12222 4669999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHH
Q 018453 122 GRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYG 201 (355)
Q Consensus 122 Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~ 201 (355)
|||+.++++.++..++.++.++++|+++++++|++.|+|.|....+.+.|++|..|++.||...++.+....+|..++..
T Consensus 117 GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~ 196 (513)
T KOG0254|consen 117 GRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYC 196 (513)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999955
Q ss_pred HHHHhhccccchhHHHHhHHHHHHHHHHHHhhcccchhHHHHhhccccCchhhhHHHHHHHHHHHhCCCCCCCchhHHHH
Q 018453 202 IGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDE 281 (355)
Q Consensus 202 i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (355)
++....+...+||..+.+..+++++..+..+++||+|+|+.+++ +.+++++.++++++....+. ..+.++
T Consensus 197 ~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g---------~~~~a~~~l~~l~g~~~~~~-~~~~~~ 266 (513)
T KOG0254|consen 197 INYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKG---------RLEEAKRSLKRLRGLSPEDV-EVELEL 266 (513)
T ss_pred HhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcC---------ChHHHHHHHHHHhCCCCcch-HHHHHH
Confidence 55554332138999999999998887777888999999999876 77999999999998542222 222222
Q ss_pred HH-Hhh-ccccccccchhhhhhcccchhHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHhccccc
Q 018453 282 IL-TEL-SYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQDFLQPLM 343 (355)
Q Consensus 282 ~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (355)
.+ +.. +....+.+..++++++...+++..+++.+..++|++|.+.+.+|.+++|+..+....
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~ 330 (513)
T KOG0254|consen 267 LKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSD 330 (513)
T ss_pred HHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCc
Confidence 22 111 111122233577788866888999999999999999999999999999999987743
No 4
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.96 E-value=1.1e-26 Score=222.82 Aligned_cols=276 Identities=20% Similarity=0.218 Sum_probs=202.5
Q ss_pred HHHHHHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Q 018453 51 ILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILA 130 (355)
Q Consensus 51 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~ 130 (355)
+.+++++.++.+.++++...++...+.+..+... ++.+.+..+.+++.+...++.++++++.|+++||+|||+.+.++
T Consensus 15 ~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~ 92 (502)
T TIGR00887 15 FRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYH--GKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGME 92 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 3344777888999999999999888876542111 11356677889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhh------HHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 018453 131 ALLYLVGALVTALAPD------FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGS 204 (355)
Q Consensus 131 ~~l~~~~~~~~~~~~~------~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~ 204 (355)
.++.+++.++.+++++ ++.++++|++.|++.|...+..+.++.|++|+++|++++++.+....+|.++++.++.
T Consensus 93 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~ 172 (502)
T TIGR00887 93 LIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVAL 172 (502)
T ss_pred HHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888765 7889999999999999999999999999999999999999999999999999998887
Q ss_pred Hhhc----------------------cccchhHHHHhHHHHHHHHHHHHhhcccchhHHHHhhccccCchhhhHHHHHHH
Q 018453 205 LLVD----------------------LVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISC 262 (355)
Q Consensus 205 ~l~~----------------------~~~~w~~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~ 262 (355)
.+.. ...+||+.+.+.++++++.++..+++||||+|+..+++ +++++.+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~--------~~~~a~~~ 244 (502)
T TIGR00887 173 IVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAK--------DVEQAASD 244 (502)
T ss_pred HHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCc--------chHHHHHH
Confidence 6532 01279999998888888877777889999999987651 11345555
Q ss_pred HHHHhCCCCCCCchhHHHHHHHhhccccccccchhhhhhcccchh---HHHHHHHHHHHHhhhhhhHHHHhHHHHHHHhc
Q 018453 263 LCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLK---ALIIGAGLVLFQQITGQPSVLYYAASILQDFL 339 (355)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (355)
+++++..+.+++ .++.++.+++ ++..+.+++++++++..+ +..+++...++.+....+++..|.|.++++.+
T Consensus 245 ~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G 319 (502)
T TIGR00887 245 MSAVLQVKIEAE-PDEVEKASTA----VEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIG 319 (502)
T ss_pred HHHHhccccccC-cccccchhcc----ccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHc
Confidence 666554322211 1111111111 111223577887643221 23333333333333445677788999998876
Q ss_pred cc
Q 018453 340 QP 341 (355)
Q Consensus 340 ~~ 341 (355)
.+
T Consensus 320 ~~ 321 (502)
T TIGR00887 320 YS 321 (502)
T ss_pred CC
Confidence 54
No 5
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.94 E-value=2.5e-24 Score=205.50 Aligned_cols=275 Identities=30% Similarity=0.499 Sum_probs=199.1
Q ss_pred HHHHHHHHHHHHHHhhhhhcccccccccccCCCCCC-CccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Q 018453 50 AILPFLFPALGGLLYGYDIGSTSCATISIESPTLSG-ISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELI 128 (355)
Q Consensus 50 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~ 128 (355)
....++.+.++.+..+++...+++..+.+.+..... ..+++++..+.+++.+++.++.++++++.|+++||+|||++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~ 89 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLK 89 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 344446667889999999999999888776642221 1224889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhh------------hhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHH
Q 018453 129 LAALLYLVGALVTALA------------PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGM 196 (355)
Q Consensus 129 ~~~~l~~~~~~~~~~~------------~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~ 196 (355)
++.++.+++.++.+++ ..++.++++|++.|++.|...+....+++|++|+++||+++++.+.+..+|.
T Consensus 90 ~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~ 169 (479)
T PRK10077 90 IAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQ 169 (479)
T ss_pred HHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHH
Confidence 9999999888877753 2256788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhc-------cccchhHHHHhHHHHHHHHHHHHhhcccchhHHHHhhccccCchhhhHHHHHHHHHHHhCC
Q 018453 197 VGGYGIGSLLVD-------LVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQ 269 (355)
Q Consensus 197 ~~~~~i~~~l~~-------~~~~w~~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (355)
++++.++..+.. ...+||+.|++.+++.++..+..+++||+|+++..++ +.+++++..+++++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~---------~~~~~~~~~~~~~~~ 240 (479)
T PRK10077 170 LVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRG---------KQEQAEGILRKIMGN 240 (479)
T ss_pred HHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcC---------CHHHHHHHHHHHcCC
Confidence 999887765532 1238999999988887777666777999999876543 234455555555432
Q ss_pred CCCCCchhHHHHHHHhhccccccccchhhhhhcccchhHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHhccc
Q 018453 270 SIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQDFLQP 341 (355)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (355)
... .+..++..+...+ + ....+..+. ........++....+++..+.+.+.+|.|+++++.+.+
T Consensus 241 ~~~---~~~~~~~~~~~~~---~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~ 304 (479)
T PRK10077 241 TLA---TQALQEIKHSLDH---G-RKTGGKLLM-FGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGAS 304 (479)
T ss_pred hhH---HHHHHHHHHHHHH---h-hhhhhhhcc-hhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCC
Confidence 211 1111111111100 0 001111111 11223344444556667777888889999999887654
No 6
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.94 E-value=3.1e-24 Score=204.00 Aligned_cols=285 Identities=33% Similarity=0.538 Sum_probs=200.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccccccccccCCCCC-CCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Q 018453 48 SAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLS-GISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRE 126 (355)
Q Consensus 48 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~ 126 (355)
+..+...+++.++.+..+++........+.+..+... ....-+.+..+.+++.+++.++..+++++.|+++||+|||+.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~ 103 (481)
T TIGR00879 24 WKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKS 103 (481)
T ss_pred HHHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHH
Confidence 3344444666677788888888888888877654110 000112458999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 018453 127 LILAALLYLVGALVTALAP---DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIG 203 (355)
Q Consensus 127 ~~~~~~l~~~~~~~~~~~~---~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 203 (355)
++++.++..++.+++.+.. +++.++++|++.|++.+...+....++.|++|+++|++++++.+.+..+|.++++.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 104 LLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred HHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 9999999999998886543 4558999999999999999999999999999999999999999999999999999998
Q ss_pred ---HHhhccccchhHHHHhHHHHHHHHHHHHhhcccchhHHHHhhccccCchhhhHHHHHHHHHHHhCCCCCCCch-hHH
Q 018453 204 ---SLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAP-TEV 279 (355)
Q Consensus 204 ---~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 279 (355)
....... +||+.|++.++..++.++..+++||+|+++..++ +.++.++..++.++....+... ...
T Consensus 184 ~~~~~~~~~~-~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (481)
T TIGR00879 184 SGKVSLNNTL-GWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKG---------RVEEARKSLARLRGTSGEDKELLDEL 253 (481)
T ss_pred HHhhcCCCCc-cHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcC---------ChHHHHHHHHHHhCCCCCcHHHHHHH
Confidence 5554555 9999999977777766667777899998765433 1122333333333322211110 101
Q ss_pred HHHHHhhccccccccchhhhhhccc--chhHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHhcccc
Q 018453 280 DEILTELSYVGEDKEVSLREVFHGK--CLKALIIGAGLVLFQQITGQPSVLYYAASILQDFLQPL 342 (355)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (355)
+......+.+.+..+..+.++++.. ..++.++...+.++....+.+.+.+|.|.++++.+.+.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 318 (481)
T TIGR00879 254 ELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVST 318 (481)
T ss_pred HHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCc
Confidence 1101110001111122244444432 24566666667777777777788899999988877554
No 7
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.93 E-value=3.8e-24 Score=200.19 Aligned_cols=182 Identities=20% Similarity=0.247 Sum_probs=162.1
Q ss_pred HHHHHHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Q 018453 51 ILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILA 130 (355)
Q Consensus 51 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~ 130 (355)
|...++++++.+..+++....+...|.+.++ +|++..+.+++.+++.+++.+++++.|+++||+|||+.+..+
T Consensus 7 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~-------~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~ 79 (412)
T TIGR02332 7 RRLIIFLFILFIFSFLDRINIGFAGLTMGKD-------LGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGI 79 (412)
T ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHhhHhh-------cCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHH
Confidence 4444666777778889999999999987776 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc-
Q 018453 131 ALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL- 209 (355)
Q Consensus 131 ~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~- 209 (355)
.++.+++.++.+++++++.+++.|++.|++.+...+....++.|++|+++|++++++++.+..+|.++++++++.+.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 159 (412)
T TIGR02332 80 MVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALD 159 (412)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999988642
Q ss_pred ----ccchhHHHHhHHHHHHHHH-HHHhhcccchh
Q 018453 210 ----VAGWRYMYGASTPLAVIMG-MGMWWLPASPR 239 (355)
Q Consensus 210 ----~~~w~~~~~~~~~~~~~~~-~~~~~~~esp~ 239 (355)
..|||++|++.++++++.. +.++++||+|+
T Consensus 160 ~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 160 GLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred CCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 2389999999888876644 45566889885
No 8
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.4e-25 Score=199.48 Aligned_cols=266 Identities=15% Similarity=0.106 Sum_probs=206.9
Q ss_pred HHHHHHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Q 018453 51 ILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILA 130 (355)
Q Consensus 51 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~ 130 (355)
+-+.+.+.+++..+++.....+.+.|.+.++ .++|.+|.|++.+.+.+.|.++.++.|.++||.+.|+.+..+
T Consensus 28 ~qif~~~fiGYa~fYl~RknF~~a~p~l~e~-------~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~g 100 (448)
T COG2271 28 IQIFLSIFIGYAAFYLTRKNFNLAMPALIED-------GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFG 100 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhccHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHH
Confidence 4455778899999999999999999999987 789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHH--HHhhc
Q 018453 131 ALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIG--SLLVD 208 (355)
Q Consensus 131 ~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~--~~l~~ 208 (355)
+++.++.+++.++.++.+.+.++.++.|..+|...|.+...+..|+|+++||+..++++++.++|+.+.|++. +.+..
T Consensus 101 Lilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~ 180 (448)
T COG2271 101 LILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAF 180 (448)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 78877
Q ss_pred cccchhHHHHhHHHHHHHHH-HHHhhcccchhHHHHhhccccCchhhhHHHHHHHHHHHhCCCCCCCchhHHHHHHHhhc
Q 018453 209 LVAGWRYMYGASTPLAVIMG-MGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELS 287 (355)
Q Consensus 209 ~~~~w~~~~~~~~~~~~~~~-~~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (355)
+. +||..|++.++++++.. +.++..+|+|+-.-... .|| .+++..+ .. +
T Consensus 181 ~~-~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~----------ie~-------~~~d~~e-----~~-------~ 230 (448)
T COG2271 181 HG-GWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPP----------IEE-------YRGDPLE-----IY-------E 230 (448)
T ss_pred cc-chhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCC----------HHH-------hhcCchh-----hh-------h
Confidence 76 99999999999988754 45566889987322111 111 1111100 00 0
Q ss_pred cccccccchhhhhhcccch-hHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHhccccchhhhhhhhhc
Q 018453 288 YVGEDKEVSLREVFHGKCL-KALIIGAGLVLFQQITGQPSVLYYAASILQDFLQPLMQHGSQFYLAY 353 (355)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (355)
++++++.-+.++++.+..+ .+.+..+.+.-+.....-+++..|.|.|+.+...-...+.+..+.+|
T Consensus 231 ~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lf 297 (448)
T COG2271 231 EEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLF 297 (448)
T ss_pred hhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHH
Confidence 0111111444454433322 24444444444444556899999999999887655555555554443
No 9
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.93 E-value=8.7e-24 Score=190.26 Aligned_cols=244 Identities=23% Similarity=0.268 Sum_probs=200.3
Q ss_pred HHHHHHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Q 018453 51 ILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILA 130 (355)
Q Consensus 51 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~ 130 (355)
+..++.+.++.|..+.........+|.+.++ +|+|....|+..++|.+++.++.++...+.||+.||+.++..
T Consensus 12 ~~~l~aLa~~~F~igttEfv~~gLLp~iA~d-------l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~ 84 (394)
T COG2814 12 WLALLALALAAFAIGTTEFVPVGLLPPIAAD-------LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGL 84 (394)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHhchHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHH
Confidence 4444667888899999999999999999997 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 018453 131 ALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210 (355)
Q Consensus 131 ~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 210 (355)
+.+.+++.+++++++|++.++++|++.|++.|..++....+..+..|+++|++++++...+..++.++|.+++.++-+..
T Consensus 85 l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~ 164 (394)
T COG2814 85 LALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLF 164 (394)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cchhHHHHhHHHHHHHHHHH-HhhcccchhHHHHhhccccCchhhhHHHHHHHHHHHhCCCCCCCchhHHHHHHHhhccc
Q 018453 211 AGWRYMYGASTPLAVIMGMG-MWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYV 289 (355)
Q Consensus 211 ~~w~~~~~~~~~~~~~~~~~-~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (355)
|||++|++.++++++.++. +..+| |+... +.
T Consensus 165 -GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~---------------------------------------------~~ 196 (394)
T COG2814 165 -GWRATFLAIAVLALLALLLLWKLLP--PSEIS---------------------------------------------GS 196 (394)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHhCC--CccCC---------------------------------------------CC
Confidence 9999999999998886655 45577 22000 00
Q ss_pred cccccchhhhhhcccchhHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHhccccchhhhhhhhhc
Q 018453 290 GEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQDFLQPLMQHGSQFYLAY 353 (355)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (355)
.+....+..+.+++|..+..++...+... |.+....|...++++...-..+...-..+.|
T Consensus 197 ~~~~~~~~~~~l~~p~v~~~l~~t~l~~~----g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~ 256 (394)
T COG2814 197 LPGPLRTLLRLLRRPGVLLGLLATFLFMT----GHFALYTYIRPFLESVAGFSVSAVSLVLLAF 256 (394)
T ss_pred CCcchhHHHHHhcCchHHHHHHHHHHHHc----chhhhHHhHHHHHHHccCCCHhHHHHHHHHH
Confidence 11222345677888776666665555554 4455557777777776654444444444433
No 10
>TIGR00898 2A0119 cation transport protein.
Probab=99.93 E-value=7.8e-24 Score=203.46 Aligned_cols=227 Identities=24% Similarity=0.386 Sum_probs=177.9
Q ss_pred cccccccCCCCCCCccccCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHH
Q 018453 73 CATISIESPTLSGISWYDLS---SVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFII 149 (355)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~s---~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~ 149 (355)
...+.+.++ ++++ ..+.+++.+++.+|.+++.++.|+++||+|||++++++.++..++.++.+++++++.
T Consensus 110 ~~~~~i~~e-------~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (505)
T TIGR00898 110 TFSSTIVTE-------WDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTV 182 (505)
T ss_pred cccccEEEE-------ecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHH
Confidence 344555554 7888 899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHH
Q 018453 150 MVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM 229 (355)
Q Consensus 150 ~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~ 229 (355)
++++|++.|++.+...+....++.|++|+++|+.+.++...+..+|.++++.++..+. +||+.|++.++++++..+
T Consensus 183 ~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~----~wr~~~~~~~i~~~~~~~ 258 (505)
T TIGR00898 183 FLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP----DWRWLQLAVSLPTFLFFL 258 (505)
T ss_pred HHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh----HHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999987663 599999999988888777
Q ss_pred HHhhcccchhHHHHhhccccCchhhhHHHHHHHHHHHhCCCCCCCchhHHHHHHHhhccccccccchhhhhhcccchhHH
Q 018453 230 GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKAL 309 (355)
Q Consensus 230 ~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (355)
..+++||+|+|+..++ +.+++.+.+++..+.+......+......++ +..++.++.+++++++++..+..
T Consensus 259 ~~~~~~esp~~l~~~~---------~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~ 328 (505)
T TIGR00898 259 LSWFVPESPRWLISQG---------RIEEALKILQRIAKINGKKLPAEVLSLSLEK-DLSSSKKQYSFLDLFRTPNLRKT 328 (505)
T ss_pred HHHhcCCChHHHHHCC---------CHHHHHHHHHHHHHHcCCCCCHHHHhhhhhh-hhhhccCCCcHHHHhCChHHHHH
Confidence 7788999999987765 3455556665554333222111111111011 11111224577889998877777
Q ss_pred HHHHHHHHHHh
Q 018453 310 IIGAGLVLFQQ 320 (355)
Q Consensus 310 ~~~~~~~~~~~ 320 (355)
.+...+.++..
T Consensus 329 ~~~~~~~~~~~ 339 (505)
T TIGR00898 329 TLCLMMLWFTT 339 (505)
T ss_pred HHHHHHHHHHH
Confidence 66665555543
No 11
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.92 E-value=1.1e-22 Score=194.44 Aligned_cols=181 Identities=20% Similarity=0.314 Sum_probs=149.3
Q ss_pred HHHHHHHHHHhhhhhcccccccccccCCCCCCCcccc--CChh--HHHH--HHHHHHHHHHHHHHHHHHHHHHhccHHHH
Q 018453 54 FLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYD--LSSV--EIGL--ITSGSLYGALIGSILAFNIADILGRRREL 127 (355)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~s~~--~~~~--~~~~~~~~~~~~~~~~g~l~dr~Grr~~~ 127 (355)
.+.+.++.++.+++....+...+.+.++ ++ .++. ..+. +.++.++++.+++++.|+++||+|||+++
T Consensus 18 ~~~~~~g~~~~~~d~~~~~~~~~~i~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l 90 (490)
T PRK10642 18 ITAASLGNAMEWFDFGVYGFVAYALGKV-------FFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKIL 90 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-------hCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH
Confidence 3556778889999999988888887765 33 2221 1222 24778899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhHHH--------HHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHH
Q 018453 128 ILAALLYLVGALVTALAPDFII--------MVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGG 199 (355)
Q Consensus 128 ~~~~~l~~~~~~~~~~~~~~~~--------~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~ 199 (355)
.++.++++++++++++++++.. ++++|+++|++.|+.++....++.|++|+++||++.++...+..+|.+++
T Consensus 91 ~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg 170 (490)
T PRK10642 91 AITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLG 170 (490)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999764 78999999999999999999999999999999999999998888888888
Q ss_pred HHHHHHhhc--------cccchhHHHHhHHHHHHHHHHHHhhcccchhHHH
Q 018453 200 YGIGSLLVD--------LVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLL 242 (355)
Q Consensus 200 ~~i~~~l~~--------~~~~w~~~~~~~~~~~~~~~~~~~~~~esp~~l~ 242 (355)
+.+...+.. .. |||+.|++.++++++.+++..++||+|+|..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~-gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~ 220 (490)
T PRK10642 171 AGVVVLISTIVGEANFLDW-GWRIPFFIALPLGIIGLYLRHALEETPAFQQ 220 (490)
T ss_pred HHHHHHHHHhcCHHHhcCc-cHHHHHHHHHHHHHHHHHHHHcCCCChhHHH
Confidence 876654432 33 8999999987766666656667899998754
No 12
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.92 E-value=6.5e-29 Score=235.30 Aligned_cols=275 Identities=34% Similarity=0.563 Sum_probs=215.6
Q ss_pred HHHHHHHHhhhhhcccccccccccCCCCCC---Cc-cccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Q 018453 56 FPALGGLLYGYDIGSTSCATISIESPTLSG---IS-WYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAA 131 (355)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~ 131 (355)
++.++.+..|++...++...+......... .+ ..+.+..+.+++.+...+|..+|+++.|.++||+|||+.+.++.
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~ 83 (451)
T PF00083_consen 4 IASLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISA 83 (451)
T ss_pred eeHHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence 345666888888877766665554211111 00 01113467899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 018453 132 LLYLVGALVTALAP---DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (355)
Q Consensus 132 ~l~~~~~~~~~~~~---~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 208 (355)
++..++.++.++++ +++.+.++|++.|++.|+..+..+.++.|..|+++|++..++.+.+..+|.+++..++..+..
T Consensus 84 ~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~ 163 (451)
T PF00083_consen 84 LLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSY 163 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999 999999999999999999999999999999999999999999999999999999888765533
Q ss_pred cc--cchhHHHHhHHHHHHHHHHHHhhcccchhHHHHhhccccCchhhhHHHHHHHHHHHhCCCCCCCchhHHHHHHHhh
Q 018453 209 LV--AGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTEL 286 (355)
Q Consensus 209 ~~--~~w~~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (355)
.. .+||+.+++.++++++..+..+++||||+|+.+++ +.+|+++.++++++++..+++ .+++.++.
T Consensus 164 ~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~---------~~~~A~~~l~~~~~~~~~~~~---~~~~~~~~ 231 (451)
T PF00083_consen 164 YSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKG---------RDEEAEKVLRKLRGKEIEDEE---IEEIKAEK 231 (451)
T ss_pred ccccccccccccccccccccccccccccccccceecccc---------ccccccccccccccccccccc---cccccccc
Confidence 22 25999999999998887777788999999998877 557888888887666443222 11111111
Q ss_pred ccccccccchhhhhhcccc-hhHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHhccccc
Q 018453 287 SYVGEDKEVSLREVFHGKC-LKALIIGAGLVLFQQITGQPSVLYYAASILQDFLQPLM 343 (355)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (355)
++ .++.+..++++++++. ++++.+.+.+.+++++++.+.+.+|.+.++++.+.+..
T Consensus 232 ~~-~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~ 288 (451)
T PF00083_consen 232 KE-SQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS 288 (451)
T ss_pred cc-ccccceeeeeccccccccccccccccccccccccccccccccccccccccccccc
Confidence 11 1112267888888864 67888888899999999999999999999988776643
No 13
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.91 E-value=4.9e-23 Score=194.12 Aligned_cols=178 Identities=14% Similarity=0.110 Sum_probs=157.1
Q ss_pred HHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Q 018453 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (355)
Q Consensus 55 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~ 134 (355)
....++.+...++....+..+|.+.++ +|++..+.+++.+.+.+++.+++++.|+++||+|||+.+.++.++.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~ 98 (434)
T PRK11663 26 ITMYLGYALFYFTRKSFNAAMPEMLAD-------LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIAT 98 (434)
T ss_pred HHHHHHHHHHHHhhhhHHHhhHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHH
Confidence 444555666666776778888888876 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchh
Q 018453 135 LVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWR 214 (355)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~ 214 (355)
+++.++.+++++++.+++.|++.|++.|...+....++.|++|+++|++++++.+.+..+|.++++.+.+.+.+.. +||
T Consensus 99 ~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~-gw~ 177 (434)
T PRK11663 99 GIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHY-GWR 177 (434)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-cHH
Confidence 9999999999999999999999999999888999999999999999999999999999999999999999998877 899
Q ss_pred HHHHhHHHHHHHHH-HHHhhcccchhH
Q 018453 215 YMYGASTPLAVIMG-MGMWWLPASPRW 240 (355)
Q Consensus 215 ~~~~~~~~~~~~~~-~~~~~~~esp~~ 240 (355)
+.|++.++++++.. +..++++|+|++
T Consensus 178 ~~f~~~~i~~~~~~~~~~~~~~~~p~~ 204 (434)
T PRK11663 178 YGMMIAGIIAIVVGLFLCWRLRDKPQA 204 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHhh
Confidence 99999887766543 444557887753
No 14
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.91 E-value=5.5e-23 Score=189.02 Aligned_cols=215 Identities=16% Similarity=0.044 Sum_probs=162.5
Q ss_pred cccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 018453 71 TSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIM 150 (355)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~ 150 (355)
.++.+|.+.++ +|++..+.|++.+.+.+++.+++++.|+++||+|||++++.+......+.+.....++++.+
T Consensus 10 ~~~~lp~i~~~-------~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (368)
T TIGR00903 10 FSPVLSLVAED-------IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWL 82 (368)
T ss_pred HHhhHHHHHHH-------hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 45667777775 89999999999999999999999999999999999988765555554444333333789999
Q ss_pred HHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHH-
Q 018453 151 VVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM- 229 (355)
Q Consensus 151 ~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~- 229 (355)
+++|++.|++.+. .......+.|++|+++|++++++.+.+..+|.++++++++.+.+.. |||+.|++.++++++..+
T Consensus 83 ~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~-gWr~~f~~~~~l~~~~~~~ 160 (368)
T TIGR00903 83 LACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG-GLQLLIIPIAAVAAAGIIL 160 (368)
T ss_pred HHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-chHHHHHHHHHHHHHHHHH
Confidence 9999999999986 4555666799999999999999999999999999999999998876 999999998887766544
Q ss_pred HHhhcccchhHHHHhhccccCchhhhHHHHHHHHHHHhCCCCCCCchhHHHHHHHhhccccccccchhhhhhcccchhHH
Q 018453 230 GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKAL 309 (355)
Q Consensus 230 ~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (355)
.++++||+|++. + +. .. . .+ ...+++++++++..+..
T Consensus 161 ~~~~lp~~p~~~---~-----~~------------------~~---~---~~-----------~~~~~~~ll~~~~~~~~ 197 (368)
T TIGR00903 161 VLAALPALPFQA---A-----EG------------------FG---F---KD-----------AVKEFGALAGRKDLWII 197 (368)
T ss_pred HHHHcCCCCCCC---C-----CC------------------cc---h---HH-----------HHHHHHHHHcChhHHHH
Confidence 455689887531 0 00 00 0 00 00135678887665544
Q ss_pred HHHHHHHHHHhhhhhhHHHHhHHHHHHHhccc
Q 018453 310 IIGAGLVLFQQITGQPSVLYYAASILQDFLQP 341 (355)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (355)
.+. .+......+.+..|+|+++++.+.+
T Consensus 198 ~~~----~~~~~~~~~~~~~wlp~~L~~~g~s 225 (368)
T TIGR00903 198 GAI----LGFGVALFDNLAIWLEAALRPAGLE 225 (368)
T ss_pred HHH----HHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 443 3333445778889999999886644
No 15
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.91 E-value=4.6e-22 Score=185.40 Aligned_cols=184 Identities=24% Similarity=0.363 Sum_probs=163.2
Q ss_pred HHHHHHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Q 018453 51 ILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILA 130 (355)
Q Consensus 51 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~ 130 (355)
|.....+.++.+..+++....++..+.+.++ +|++..+.+++.+++.++..+++++.|+++||+|||+.++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~ 83 (405)
T TIGR00891 11 WNAFSAAWLGWLLDAFDFFLVALVLAEVAGE-------FGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTS 83 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 4444666777888888888889999988776 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 018453 131 ALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210 (355)
Q Consensus 131 ~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 210 (355)
.++.+++.++.++.++++.+++.|++.|++.+...+....++.|++|+++|++++++.+.+..+|.++++.+++.+.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~ 163 (405)
T TIGR00891 84 IVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVW 163 (405)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888665
Q ss_pred c-chhHHHHhHHHHHHHHHHHHhhcccchhHH
Q 018453 211 A-GWRYMYGASTPLAVIMGMGMWWLPASPRWL 241 (355)
Q Consensus 211 ~-~w~~~~~~~~~~~~~~~~~~~~~~esp~~l 241 (355)
+ +||+.|++.+++.++..+....+||++++.
T Consensus 164 ~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 195 (405)
T TIGR00891 164 GDGWRALFFISILPIIFALWLRKNIPEAEDWK 195 (405)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhCCCChhHH
Confidence 2 499999987766666655556678876643
No 16
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.91 E-value=5.7e-22 Score=186.76 Aligned_cols=182 Identities=19% Similarity=0.260 Sum_probs=143.6
Q ss_pred HHHHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHH---HHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Q 018453 53 PFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLI---TSGSLYGALIGSILAFNIADILGRRRELIL 129 (355)
Q Consensus 53 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~ 129 (355)
.++.++++.+..+++....+...|.+.++..+ .+.+..+.+.. .+..+++..++++++|+++||+|||+.+.+
T Consensus 23 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 23 AIVGASSGNLVEWFDFYVYSFCSLYFAHIFFP----SGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 33566678888899999888888887764111 03445544443 444555556999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHH
Q 018453 130 AALLYLVGALVTALAPDFI--------IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYG 201 (355)
Q Consensus 130 ~~~l~~~~~~~~~~~~~~~--------~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~ 201 (355)
+.++.+++++++++++++. .++++|+++|++.|..++....++.|++|+++||+..++.+.+...|.++++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~ 178 (432)
T PRK10406 99 SVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALL 178 (432)
T ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888753 58899999999999999999999999999999999999999888888888887
Q ss_pred HHHHhhc--------cccchhHHHHhHHHHHHHHHHHHhhcccchh
Q 018453 202 IGSLLVD--------LVAGWRYMYGASTPLAVIMGMGMWWLPASPR 239 (355)
Q Consensus 202 i~~~l~~--------~~~~w~~~~~~~~~~~~~~~~~~~~~~esp~ 239 (355)
+...+.. .. |||+.|++.++++++..+....+||+|+
T Consensus 179 ~~~~~~~~~~~~~~~~~-gWr~~F~i~~~~~ll~~~~~~~~~e~~~ 223 (432)
T PRK10406 179 VVVVLQQTLEDAELREW-GWRIPFALGAVLAVVALWLRRQLDETSQ 223 (432)
T ss_pred HHHHHHHhCCHHHHhcc-chHHHHHHHHHHHHHHHHHHhcCCCCch
Confidence 6554432 33 9999999988877766554445666653
No 17
>PRK03545 putative arabinose transporter; Provisional
Probab=99.91 E-value=3.2e-22 Score=186.04 Aligned_cols=172 Identities=20% Similarity=0.276 Sum_probs=148.3
Q ss_pred HHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q 018453 58 ALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVG 137 (355)
Q Consensus 58 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~ 137 (355)
.++.+..........+.+|.+.++ +|.+..+.+++.+.+.+++.+++++.|.+.||+|||+.+..+.++..++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~l~~~-------~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 87 (390)
T PRK03545 15 ALAAFIFNTTEFVPVGLLSDIAQS-------FHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIAS 87 (390)
T ss_pred HHHHHHHHhHHHHHHcchHHHHhH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHH
Confidence 333333333333445567777776 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHH
Q 018453 138 ALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMY 217 (355)
Q Consensus 138 ~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~ 217 (355)
.++++++++++.++++|++.|++.+...+....++.|++|+++|++++++...+..+|.+++|++++.+.+.. |||+.|
T Consensus 88 ~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f 166 (390)
T PRK03545 88 HVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYL-GWRTTF 166 (390)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHh-cHHHHH
Confidence 9999999999999999999999999888999999999999999999999999999999999999999988876 999999
Q ss_pred HhHHHHHHHHHHHH-hhcccc
Q 018453 218 GASTPLAVIMGMGM-WWLPAS 237 (355)
Q Consensus 218 ~~~~~~~~~~~~~~-~~~~es 237 (355)
++.++++++..+.. .++||.
T Consensus 167 ~~~~~~~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 167 LAIGGGALITLLLLIKLLPLL 187 (390)
T ss_pred HHHHHHHHHHHHHHHHhCCCC
Confidence 99888877654443 335553
No 18
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.90 E-value=5.7e-22 Score=186.47 Aligned_cols=178 Identities=19% Similarity=0.281 Sum_probs=155.0
Q ss_pred HHHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Q 018453 54 FLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALL 133 (355)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l 133 (355)
.+.+.++.+..+++.....+..|.+.++ +|+++.+.+++.+++.+++.+++++.|+++||+|||+.++++.++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-------~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~ 92 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYLIKAD-------LGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVA 92 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 3556677777888888888888888775 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccch
Q 018453 134 YLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGW 213 (355)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w 213 (355)
.+++.++.+++++++.++++|++.|++.|...+....++.|++|+++|++++++...+..+|.++++.+.+.+.+.. +|
T Consensus 93 ~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~-~w 171 (426)
T PRK12307 93 YSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAY-GW 171 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccC-CH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888776 99
Q ss_pred hHHHHhHHHHHHHHHHHHhhcccchh
Q 018453 214 RYMYGASTPLAVIMGMGMWWLPASPR 239 (355)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~esp~ 239 (355)
|+.|++.++..++.+......||+++
T Consensus 172 ~~~f~i~~~~~~~~~~~~~~~p~~~~ 197 (426)
T PRK12307 172 RAAFFVGLLPVLLVIYIRARAPESKE 197 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCChH
Confidence 99998865443333322223455543
No 19
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.90 E-value=8.5e-22 Score=184.10 Aligned_cols=184 Identities=28% Similarity=0.381 Sum_probs=163.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Q 018453 49 AAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELI 128 (355)
Q Consensus 49 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~ 128 (355)
..|...+++.+..+..+++....+...|.+.++ +|.++.+.+++.+.+.++..+++++.|+++||+|||+.+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~ 84 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAPRMAQE-------FGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILI 84 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHH
Confidence 445555677777888899998899999988876 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 018453 129 LAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (355)
Q Consensus 129 ~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 208 (355)
.+.++..++.++..+.++++.+++.|++.|++.+...+....++.|++|+++|++++++.+.+..+|..+++.+++.+.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 164 (406)
T PRK11551 85 VSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAG 164 (406)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999889999999999999999999999999999999999999999999999999999999999999888877
Q ss_pred cccchhHHHHhHHHHHHHHHH-HHhhcccchhH
Q 018453 209 LVAGWRYMYGASTPLAVIMGM-GMWWLPASPRW 240 (355)
Q Consensus 209 ~~~~w~~~~~~~~~~~~~~~~-~~~~~~esp~~ 240 (355)
.. +|++.|++.+++.++..+ ..+++||+|++
T Consensus 165 ~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 196 (406)
T PRK11551 165 DA-AWRHIFYVGGVGPLLLVPLLMRWLPESRAF 196 (406)
T ss_pred cc-CHHHHHHHHHHHHHHHHHHHHHhCCCChhH
Confidence 66 899999988776555443 44557887753
No 20
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.90 E-value=5.4e-22 Score=189.99 Aligned_cols=181 Identities=17% Similarity=0.162 Sum_probs=162.6
Q ss_pred HHHHHHHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Q 018453 50 AILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELIL 129 (355)
Q Consensus 50 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~ 129 (355)
.|...+.++++.++..++.+.++..+|.+.++ +|.+..+.+|+.+.+.+++.++.++.|+++||+|||+.+++
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~-------l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~ 76 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPTLSMT-------LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLML 76 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 34556777888999999999999999999887 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 018453 130 AALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETA-PTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (355)
Q Consensus 130 ~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~-~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 208 (355)
+.++..+++++++++++++.++++|+++|++.+...+.....+.+.+ |+++|+++++++.....+|..+||.+++.+.+
T Consensus 77 ~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~ 156 (495)
T PRK14995 77 GGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE 156 (495)
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999998888887777765 67899999999999999999999999999998
Q ss_pred cccchhHHHHhHHHHHHHHHHH-Hhhcccch
Q 018453 209 LVAGWRYMYGASTPLAVIMGMG-MWWLPASP 238 (355)
Q Consensus 209 ~~~~w~~~~~~~~~~~~~~~~~-~~~~~esp 238 (355)
+. +||+.|++...++++.+++ .+++|+++
T Consensus 157 ~~-gwr~~f~i~~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 157 HF-YWGSVFLINVPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred cC-ChHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 87 9999999988776665443 44567654
No 21
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.90 E-value=6e-22 Score=188.46 Aligned_cols=256 Identities=14% Similarity=0.099 Sum_probs=186.3
Q ss_pred HHHHHHHHHHHHHhhhhhcccccccccccCCCCCC---------------CccccCChhHHHHHHHHHHHHHHHHHHHHH
Q 018453 51 ILPFLFPALGGLLYGYDIGSTSCATISIESPTLSG---------------ISWYDLSSVEIGLITSGSLYGALIGSILAF 115 (355)
Q Consensus 51 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g 115 (355)
+.+.+++.++......+....+...+.+.++.... ..+++++..+.|++.+.+.+++.+++++.|
T Consensus 18 ~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g 97 (465)
T TIGR00894 18 LFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIIIQIPVG 97 (465)
T ss_pred HHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHHHcchH
Confidence 44445556666667778888888887776521110 014799999999999999999999999999
Q ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHH
Q 018453 116 NIADILGRRRELILAALLYLVGALVTALA--PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIV 193 (355)
Q Consensus 116 ~l~dr~Grr~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~ 193 (355)
+++||+|||+.+..+.++..++.++..++ .+++.+++.|++.|++.+...+....++.|++|+++|++++++...+..
T Consensus 98 ~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 177 (465)
T TIGR00894 98 YLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQ 177 (465)
T ss_pred HHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999998888877544 4578899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhh-cccchhHHHHhhccccCchhhhHHHHHHHHHHHhCCCCC
Q 018453 194 LGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW-LPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIG 272 (355)
Q Consensus 194 ~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (355)
+|.++++++++.+.+...+||+.|++.+++.++..+++++ .+|+|+... +. ..+|.+. +++..
T Consensus 178 ~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~------~~----~~~~~~~-i~~~~----- 241 (465)
T TIGR00894 178 LGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHP------CI----SKFEKKY-INSSL----- 241 (465)
T ss_pred HHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCC------CC----CHHHHHH-HHhhc-----
Confidence 9999999999998876238999999998887776555544 566664110 00 0011111 11000
Q ss_pred CCchhHHHHHHHhhccccccccchhhhhhcccchhHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHh
Q 018453 273 DSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQDF 338 (355)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (355)
+.++..++.+..++++++++..+...+ ..+....+.+.+..|+|.++++.
T Consensus 242 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~lp~~l~~~ 291 (465)
T TIGR00894 242 ------------QGQKGSTRQSLPIKAIPKSLPVWAIWF----AIFGHFWLYTILPTYLPTFISWV 291 (465)
T ss_pred ------------ccccCCCCCCCCHHHHhcCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 000001112345777887755444443 33344445678889999999775
No 22
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.90 E-value=7.5e-22 Score=184.66 Aligned_cols=222 Identities=25% Similarity=0.297 Sum_probs=178.6
Q ss_pred cccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhh--HHHHHHHHHHHHHHHhhHH
Q 018453 88 WYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPD--FIIMVVGRFVFGIGIGLAM 165 (355)
Q Consensus 88 ~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~r~l~G~~~g~~~ 165 (355)
+++++..+.+++.+.+++|++++++++|++.||+|.|+++..+.++.++++++...+.+ ++.+++.|+++|++.|..+
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~ 146 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLF 146 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHH
Confidence 47999999999999999999999999999999999999999999999999999988754 5678999999999999999
Q ss_pred hHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhh-cccchhHHHHh
Q 018453 166 HAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW-LPASPRWLLLC 244 (355)
Q Consensus 166 ~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~esp~~l~~~ 244 (355)
++...+..+|+|+++|++..++...+..+|.+++.++++.+.+...||+++|++.++++++..+++++ ..|+|+....-
T Consensus 147 pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~i 226 (466)
T KOG2532|consen 147 PAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPNI 226 (466)
T ss_pred hhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCCC
Confidence 99999999999999999999999999999999999999999998449999999999999988777655 56777531110
Q ss_pred hccccCchhhhHHHHHHHHHHHhCCCCCCCchhHHHHHHHhhccccccccchhhhhhcccchhHHHHHHHHHHHHhhhhh
Q 018453 245 AMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQ 324 (355)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (355)
..+|.+.+.+... + +..++..+..++++++++..+..++ ..+....+.
T Consensus 227 ----------s~~El~~I~~~k~-----------------~-~~~~~~~~vP~~~i~ts~~vwai~~----~~f~~~~~~ 274 (466)
T KOG2532|consen 227 ----------SEKELKYIEKGKS-----------------E-AHVKKKPPVPYKAILTSPPVWAIWI----SAFGGNWGF 274 (466)
T ss_pred ----------CHHHHHHHHhccc-----------------c-cccCCCCCCCHHHHHcCHHHHHHHH----HHHHHHHHH
Confidence 1122222111110 0 0011125778999999865555544 444445568
Q ss_pred hHHHHhHHHHHHHhccc
Q 018453 325 PSVLYYAASILQDFLQP 341 (355)
Q Consensus 325 ~~~~~~~~~~~~~~~~~ 341 (355)
+.+..|+|.|++++..-
T Consensus 275 ~~l~~y~PtY~~~VL~f 291 (466)
T KOG2532|consen 275 YLLLTYLPTYLKEVLGF 291 (466)
T ss_pred HHHHHHhhHHHHHHhCC
Confidence 89999999999987743
No 23
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.90 E-value=7.7e-22 Score=190.29 Aligned_cols=218 Identities=22% Similarity=0.292 Sum_probs=173.9
Q ss_pred cccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhH
Q 018453 88 WYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (355)
Q Consensus 88 ~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 167 (355)
+++.+.....+..+++++|.++|++++|.++||+|||++++++.++..++.++.++++|++.+++.|++.|++.++....
T Consensus 112 ~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~ 191 (521)
T KOG0255|consen 112 LVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTV 191 (521)
T ss_pred eeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHH
Confidence 36778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhcccchhHHHHhhcc
Q 018453 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMK 247 (355)
Q Consensus 168 ~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~ 247 (355)
...++.|++++++|+.++.+ ....-.++.++++.++++.. +||+.+++..++.++.++.+++.||+|+|+..++
T Consensus 192 ~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g-- 265 (521)
T KOG0255|consen 192 GFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKG-- 265 (521)
T ss_pred hHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcC--
Confidence 99999999999999999999 77777778888888777765 8999999999998888777777789999999887
Q ss_pred ccCchhhhHHHHHHHHHHHhCCCCCC-CchhHHHHH--HHhhccccccccchhhhhhcccchhHHHHHHHHHHH
Q 018453 248 RKGDMQDLRESAISCLCRLRGQSIGD-SAPTEVDEI--LTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLF 318 (355)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (355)
+.+++.+++++....+..+ ...+..++. .++......+++..+.++++.+..++..+...+.++
T Consensus 266 -------~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~ 332 (521)
T KOG0255|consen 266 -------RIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWF 332 (521)
T ss_pred -------chHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHH
Confidence 5577888887775433111 112222221 111111223344668899998855544444444443
No 24
>TIGR00895 2A0115 benzoate transport.
Probab=99.90 E-value=1.5e-21 Score=181.20 Aligned_cols=181 Identities=28% Similarity=0.461 Sum_probs=157.4
Q ss_pred HHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Q 018453 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (355)
Q Consensus 55 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~ 134 (355)
+.+.+..+..++.........|.+.++ +|.+..+.+++.+...++..++.++.|+++||+|||+.+..+.++.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 92 (398)
T TIGR00895 20 ILSFLIMLMDGYDLAAMGFAAPAISAE-------WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLF 92 (398)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHhhc-------cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHH
Confidence 444455566666666777778887775 7999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchh
Q 018453 135 LVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWR 214 (355)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~ 214 (355)
+++.++..+.++++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|..+++.+++.+.+.. +|+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-g~~ 171 (398)
T TIGR00895 93 SVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVF-GWR 171 (398)
T ss_pred HHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcc-cce
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998877 899
Q ss_pred HHHHhHHHHHHH-HHHHHhhcccchhHHHH
Q 018453 215 YMYGASTPLAVI-MGMGMWWLPASPRWLLL 243 (355)
Q Consensus 215 ~~~~~~~~~~~~-~~~~~~~~~esp~~l~~ 243 (355)
+.|++.++++++ ..+..+++||++++...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (398)
T TIGR00895 172 SLFYVGGIAPLLLLLLLMRFLPESIDFLVS 201 (398)
T ss_pred eehhhhhhHHHHHHHHHHHhCCCCChHHHh
Confidence 999988655554 44455668888776543
No 25
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.89 E-value=5.4e-21 Score=177.86 Aligned_cols=158 Identities=20% Similarity=0.309 Sum_probs=141.0
Q ss_pred ccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 018453 72 SCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMV 151 (355)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~ 151 (355)
.+.+|.+.++ +|+++.+.++..+++.++..+++++.|.+.||+|||+.++.+.++.+++.+++.+.++++.++
T Consensus 40 ~~~l~~~~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~ 112 (394)
T PRK10213 40 VSLLTPMAQD-------LGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLL 112 (394)
T ss_pred HhhHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHH
Confidence 3446666665 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHH
Q 018453 152 VGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGM 231 (355)
Q Consensus 152 ~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~ 231 (355)
+.|++.|++.|...+....++.|++|+++|++++++...+.++|.+++|++++.+.+.. +||+.|++.++++++..+..
T Consensus 113 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~~~~~l~~~~~l~~ 191 (394)
T PRK10213 113 IGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELI-GWRNVFNAAAVMGVLCIFWI 191 (394)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999887 99999998877666544333
Q ss_pred h-hcccc
Q 018453 232 W-WLPAS 237 (355)
Q Consensus 232 ~-~~~es 237 (355)
+ ..||+
T Consensus 192 ~~~~p~~ 198 (394)
T PRK10213 192 IKSLPSL 198 (394)
T ss_pred HHHCCCC
Confidence 2 34553
No 26
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.89 E-value=1.9e-21 Score=181.94 Aligned_cols=176 Identities=16% Similarity=0.228 Sum_probs=154.5
Q ss_pred HHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Q 018453 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (355)
Q Consensus 55 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~ 134 (355)
....+..+...+......+.+|.+.++ ++.+..+.++..+++.+++.+++++.|.++||+|||++++.+.++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~p~l~~i~~~-------~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 91 (413)
T PRK15403 19 MALILYDFAAYLTTDLIQPGIINVVRD-------FNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIF 91 (413)
T ss_pred HHHHHHHHHHHHHHHhhccCHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHH
Confidence 334555566666777788888887775 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchh
Q 018453 135 LVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWR 214 (355)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~ 214 (355)
+++.+++.++++++.++++|+++|++.+...+....++.|++|+++|++++++......+|..+||.+++.+.+.. +||
T Consensus 92 ~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~-gw~ 170 (413)
T PRK15403 92 TLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV-HWK 170 (413)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHH
Confidence 9999999999999999999999999988777777888999999999999999999999999999999999988776 999
Q ss_pred HHHHhHHHHHHHHHHH-Hhhcccch
Q 018453 215 YMYGASTPLAVIMGMG-MWWLPASP 238 (355)
Q Consensus 215 ~~~~~~~~~~~~~~~~-~~~~~esp 238 (355)
+.|++.+++.++..+. ++++||++
T Consensus 171 ~~f~~~~~~~~i~~~~~~~~lp~~~ 195 (413)
T PRK15403 171 VLFAIIAVMGLIAFVGLLLAMPETV 195 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 9999988887776554 44577764
No 27
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.89 E-value=4.1e-22 Score=189.61 Aligned_cols=183 Identities=19% Similarity=0.150 Sum_probs=155.3
Q ss_pred HHHHHHHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Q 018453 50 AILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELIL 129 (355)
Q Consensus 50 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~ 129 (355)
.+.....+.++++....+....+...|.+.++ +|++..+.|++.+++.+++.+++++.|+++||+|||+++.+
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~-------~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~ 99 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMIST-------YGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPF 99 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHH
Confidence 34455666777777888899999999988886 89999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHh-----hhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 018453 130 AALLYLVGALVTAL-----APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGS 204 (355)
Q Consensus 130 ~~~l~~~~~~~~~~-----~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~ 204 (355)
+.++.++..++.++ +++++.+++.|++.|++.+...+....++.|++|+++||++++++..+..+|.++++++..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~ 179 (467)
T PRK09556 100 LLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVAL 179 (467)
T ss_pred HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHH
Confidence 88888777766654 5789999999999999999999999999999999999999999999999999999999987
Q ss_pred Hhhccc--cchhHHHHhHHHHHHHHHHH-Hhhcccchh
Q 018453 205 LLVDLV--AGWRYMYGASTPLAVIMGMG-MWWLPASPR 239 (355)
Q Consensus 205 ~l~~~~--~~w~~~~~~~~~~~~~~~~~-~~~~~esp~ 239 (355)
.+.... .+|+..|.+.+++.++..++ +++.+++|+
T Consensus 180 ~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~ 217 (467)
T PRK09556 180 WGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPE 217 (467)
T ss_pred HHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChh
Confidence 766532 26999998888777665444 444577664
No 28
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.89 E-value=2.2e-21 Score=181.99 Aligned_cols=255 Identities=17% Similarity=0.206 Sum_probs=190.8
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Q 018453 47 VSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRE 126 (355)
Q Consensus 47 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~ 126 (355)
++..+.+..++++.++....+...++-....-.. +|.++...+.+.+.++++++++++.++++.+.||++..+.
T Consensus 40 ~K~dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~------edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~ 113 (495)
T KOG2533|consen 40 RKLDLFILPFLCYLYFHAYLDKSSIVNASLSGLK------EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKG 113 (495)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhcchhHHHcCCc------cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHH
Confidence 3333444445555555555555444333222222 2378899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 018453 127 LILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL 206 (355)
Q Consensus 127 ~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 206 (355)
+....+++++..++....+|++.+++.|++.|+..++.+|....+++.|+.+++||..++++.+..++|+++|++++..+
T Consensus 114 l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~ 193 (495)
T KOG2533|consen 114 LSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGV 193 (495)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHh
Confidence 99999999888888888999999999999999999999999999999999999999999999999999999999999986
Q ss_pred hc-----cccchhHHHHhHHHHHHHHHH-HHhhcccchh--HHHHhhccccCchhhhHHHHHHHHHHHhCCCCCCCchhH
Q 018453 207 VD-----LVAGWRYMYGASTPLAVIMGM-GMWWLPASPR--WLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTE 278 (355)
Q Consensus 207 ~~-----~~~~w~~~~~~~~~~~~~~~~-~~~~~~esp~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (355)
.. ...||||.|++.++++++..+ +.+++|+.|. +... ++|.+-..+++++....
T Consensus 194 ~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~------------~~ek~~~~~~~~~~~~~------ 255 (495)
T KOG2533|consen 194 FKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLT------------DEEKELVVERLRESPSG------ 255 (495)
T ss_pred hhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccc------------hHHHHHHHHHHHhccCC------
Confidence 42 223999999999999887654 5566899987 2211 12211112222111111
Q ss_pred HHHHHHhhccccccccchhhhhhcccchhHHHHHHHHHHHHhhhhhhHHHHhHHHHHHH
Q 018453 279 VDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQD 337 (355)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (355)
...++.+..++++.++++..+...++.++.... .+++.+|+|.++++
T Consensus 256 --------~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv----~~~~~~~lpl~l~~ 302 (495)
T KOG2533|consen 256 --------GIENKFKWKGFKEALKDPGVWPFSLCYFFLKLV----NYGFSYWLPLYLKS 302 (495)
T ss_pred --------CcccccCHHHHHHHHhchhHHHHHHHHHHHhhc----cccHHHHHHHHHHc
Confidence 001124567788889987777777655555443 68899999999998
No 29
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.89 E-value=1.1e-21 Score=170.97 Aligned_cols=262 Identities=18% Similarity=0.243 Sum_probs=195.9
Q ss_pred HHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Q 018453 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (355)
Q Consensus 55 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~ 134 (355)
.++..+++...+.....+.+.|..... .|.+..+..++....+.|..+++..+|.++|++|||+.+.+..+..
T Consensus 81 ~~ag~gwmad~m~~m~~s~i~~~l~~~-------w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t 153 (528)
T KOG0253|consen 81 FVAGMGWMADAMEMMLLSLILPALDEV-------WGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVT 153 (528)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHhh-------hchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHH
Confidence 444555555555554555555555443 5889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchh
Q 018453 135 LVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWR 214 (355)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~ 214 (355)
++...+.++.+|+..+.+.|.+.|+|.|+ .+...++-.|..|..+|+..+-+. ..+.+|.++...++...+... |||
T Consensus 154 ~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~-gwr 230 (528)
T KOG0253|consen 154 GVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNF-GWR 230 (528)
T ss_pred HHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhh-hHH
Confidence 99999999999999999999999999998 888888889999999999988887 999999999999999888887 999
Q ss_pred HHHHhHHHHHHHHHHHHhhcccchhHHHHhhccccCchhhhHHHHHHHHHHHhCCCCCCCc-----hhHHHHHHH-----
Q 018453 215 YMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSA-----PTEVDEILT----- 284 (355)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~----- 284 (355)
|.+...+.+..+.....+++||||+++..++ +++++.+.++++.+.+..+-. .+..++.++
T Consensus 231 ~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G---------~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~ 301 (528)
T KOG0253|consen 231 YLLFTSSTPLMFAARFLVWVYESPRFYLAKG---------DDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDL 301 (528)
T ss_pred HHHHHHHhHHHHHHHHHhhcccCcchhhhcC---------ChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhch
Confidence 9999999888888888899999999999988 668888888888655432211 111111111
Q ss_pred --hhccccccccchhhhhhcccchhHHHHHHHHHHHHhhhhhhHHHHhHHHHHH
Q 018453 285 --ELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQ 336 (355)
Q Consensus 285 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (355)
...+..++...+..+++.. .+|+..+..+..|+.+-...|+.....+..++
T Consensus 302 ~~~~~~a~ke~rg~~~nLlsp-~lrkttlllw~iwfgnafsyyg~VLlttelfq 354 (528)
T KOG0253|consen 302 DDSKSSAAKEVRGGTTNLLSP-KLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQ 354 (528)
T ss_pred hhhhhccccccccchHhhcCh-HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 1111223344566677774 44444444555555433334444444444443
No 30
>PRK09952 shikimate transporter; Provisional
Probab=99.88 E-value=2.1e-20 Score=176.31 Aligned_cols=183 Identities=20% Similarity=0.252 Sum_probs=144.3
Q ss_pred HHHHHHHHHHHhhhhhcccccccccccCCCCCCCccc-cCChhHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccHHH
Q 018453 53 PFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWY-DLSSVEIGLIT-----SGSLYGALIGSILAFNIADILGRRRE 126 (355)
Q Consensus 53 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~~-----~~~~~~~~~~~~~~g~l~dr~Grr~~ 126 (355)
......++.+..+++....+...+.+..+ +++ +.++. .+++. ++.+++..+++++.|+++||+|||+.
T Consensus 23 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~ 96 (438)
T PRK09952 23 AALGSFAGAVVDWYDFLLYGITAALVFNR-----EFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRM 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHH
Confidence 44566678888889988888776643221 001 44444 35443 34556678999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHH
Q 018453 127 LILAALLYLVGALVTALAPDFI--------IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVG 198 (355)
Q Consensus 127 ~~~~~~l~~~~~~~~~~~~~~~--------~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~ 198 (355)
++++.++++++.+++++++++. .++++|+++|++.|..++....++.|++|+++|++..+..+.+..+|.++
T Consensus 97 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l 176 (438)
T PRK09952 97 LMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLL 176 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 9999999999999999999876 58889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcc-------ccchhHHHHhHHHHHHHHHHHHhhcccchhHH
Q 018453 199 GYGIGSLLVDL-------VAGWRYMYGASTPLAVIMGMGMWWLPASPRWL 241 (355)
Q Consensus 199 ~~~i~~~l~~~-------~~~w~~~~~~~~~~~~~~~~~~~~~~esp~~l 241 (355)
+..+...+... ..+||+.|++.+++.++...+....||+|+|.
T Consensus 177 ~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~ 226 (438)
T PRK09952 177 STGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFE 226 (438)
T ss_pred HHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHH
Confidence 98877665421 23899999988877665544445578887653
No 31
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.88 E-value=1.9e-21 Score=180.11 Aligned_cols=166 Identities=19% Similarity=0.257 Sum_probs=147.9
Q ss_pred hhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh
Q 018453 65 GYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA 144 (355)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~ 144 (355)
.++....+...|.+.++ +|++..+.+++.+++.++..++.++.|+++||+|||+.+.++.++.+++.++.++.
T Consensus 7 ~~~~~~~~~~~~~~~~~-------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~ 79 (399)
T TIGR00893 7 YLDRANLSFAAPMLQED-------LGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA 79 (399)
T ss_pred HHHHHhhhHhHHHHHHh-------hCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH
Confidence 34555566667776665 89999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHH
Q 018453 145 PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLA 224 (355)
Q Consensus 145 ~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~ 224 (355)
++++.++++|++.|++.+...+....++.|++|+++|++.+++.+....+|.++++.+++.+.+.. +||+.|++.+++.
T Consensus 80 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~~~~ 158 (399)
T TIGR00893 80 GAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHF-SWQWAFIIEGVLG 158 (399)
T ss_pred cCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC-CchHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999988877 8999999988887
Q ss_pred HHHHHHH-hhcccch
Q 018453 225 VIMGMGM-WWLPASP 238 (355)
Q Consensus 225 ~~~~~~~-~~~~esp 238 (355)
++..+.. ++.||+|
T Consensus 159 ~~~~~~~~~~~~~~~ 173 (399)
T TIGR00893 159 IIWGVLWLKFIPDPP 173 (399)
T ss_pred HHHHHHhhheecCCC
Confidence 7655544 4456654
No 32
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.88 E-value=2.7e-20 Score=177.27 Aligned_cols=161 Identities=16% Similarity=0.178 Sum_probs=132.9
Q ss_pred hhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhh
Q 018453 67 DIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPD 146 (355)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~ 146 (355)
......+..|.+.++ +|++..+.+++.+.+.+++.+++++.|+++||+|||+++.++.++.+++.++.+++++
T Consensus 51 ~~~~~~~~~~~l~~~-------~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s 123 (476)
T PLN00028 51 STFAAAPLLPIIRDN-------LNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSS 123 (476)
T ss_pred HHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcC
Confidence 334456667777765 8999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhc----c----ccchhHHHH
Q 018453 147 FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD----L----VAGWRYMYG 218 (355)
Q Consensus 147 ~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~----~----~~~w~~~~~ 218 (355)
++.++++|++.|++.+.. .....++.|++|+++||+++++......+|..+++.+.+.+.. . ..|||+.|+
T Consensus 124 ~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~ 202 (476)
T PLN00028 124 ATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFF 202 (476)
T ss_pred HHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHH
Confidence 999999999999988764 3456688999999999999999988777777777666654421 1 138999999
Q ss_pred hHHHHHHHHHHHHhhcc
Q 018453 219 ASTPLAVIMGMGMWWLP 235 (355)
Q Consensus 219 ~~~~~~~~~~~~~~~~~ 235 (355)
+.++++++..+..++++
T Consensus 203 i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 203 VPGLLHIIMGILVLTLG 219 (476)
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 99888877655555543
No 33
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.88 E-value=8e-21 Score=181.60 Aligned_cols=175 Identities=18% Similarity=0.350 Sum_probs=158.5
Q ss_pred HHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Q 018453 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (355)
Q Consensus 55 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~ 134 (355)
+.++++.+...++....++.+|.+.++ +|.+..+.+++.+.+.++..++.++.|+++||+|||+.++++.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 77 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTIAGD-------LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAF 77 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHH
Confidence 455667778888888889999999886 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchh
Q 018453 135 LVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWR 214 (355)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~ 214 (355)
.++.++++++++++.++++|++.|++.+...+....++.|++|+++|+++++++..+..+|..++|.+++.+.+.. +||
T Consensus 78 ~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~w~ 156 (485)
T TIGR00711 78 TLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY-HWR 156 (485)
T ss_pred HHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc-Cce
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998877 999
Q ss_pred HHHHhHHHHHHHHHHHH-hhcccc
Q 018453 215 YMYGASTPLAVIMGMGM-WWLPAS 237 (355)
Q Consensus 215 ~~~~~~~~~~~~~~~~~-~~~~es 237 (355)
+.|++.++++++..++. ++.||+
T Consensus 157 ~~f~~~~~~~~~~~~~~~~~~~~~ 180 (485)
T TIGR00711 157 WIFLINVPIGIIVVVVAFFILPRD 180 (485)
T ss_pred ehhhhhhHHHHHHHHHHHHHcCCc
Confidence 99999887776655443 445654
No 34
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.88 E-value=2.1e-20 Score=173.99 Aligned_cols=152 Identities=19% Similarity=0.165 Sum_probs=138.8
Q ss_pred cccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHH
Q 018453 69 GSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFI 148 (355)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~ 148 (355)
...++.+|.+.++ +|+|..+.+++.+.+.+++.+++++.|++.||+|||++++.+..+.+++.++++++++++
T Consensus 26 ~~~~~~lp~i~~~-------~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~ 98 (393)
T PRK09705 26 TSVGPLLPQLRQA-------SGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSA 98 (393)
T ss_pred hccchhHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchH
Confidence 5677889988886 899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHH
Q 018453 149 IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMG 228 (355)
Q Consensus 149 ~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~ 228 (355)
.++++|++.|++.+...+....++.+++| ++|+++++++..+..+|..+++.+++.+.++..+||+.+.+.++..++.+
T Consensus 99 ~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~ 177 (393)
T PRK09705 99 LLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVAL 177 (393)
T ss_pred HHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999997 78999999999999999999999999888775589998877665544443
No 35
>PRK15075 citrate-proton symporter; Provisional
Probab=99.87 E-value=2.4e-20 Score=175.92 Aligned_cols=163 Identities=21% Similarity=0.316 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHH-HHHH-----HHHHHHHHHHHHHHHHHhccHHH
Q 018453 53 PFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLI-TSGS-----LYGALIGSILAFNIADILGRRRE 126 (355)
Q Consensus 53 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~-----~~~~~~~~~~~g~l~dr~Grr~~ 126 (355)
....++++.++.+++...++...|.+.++ ++.++.+.+.+ .+.. .++..+++++.|+++||+|||+.
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~ 88 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFYATAIAKT-------FFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKG 88 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHH
Confidence 34667788999999999999999999886 78777665433 2222 22334788999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHH
Q 018453 127 LILAALLYLVGALVTALAPDFI--------IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVG 198 (355)
Q Consensus 127 ~~~~~~l~~~~~~~~~~~~~~~--------~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~ 198 (355)
++.+.++..++.++++++++++ .++++|++.|++.|...+....++.|++|+++|++++++...+..+|..+
T Consensus 89 l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~ 168 (434)
T PRK15075 89 LIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVF 168 (434)
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHH
Confidence 9999999999999999998876 46889999999999999988999999999999999999999988888888
Q ss_pred HHHHHHHhh--------ccccchhHHHHhHHHH
Q 018453 199 GYGIGSLLV--------DLVAGWRYMYGASTPL 223 (355)
Q Consensus 199 ~~~i~~~l~--------~~~~~w~~~~~~~~~~ 223 (355)
++.+++.+. +.. |||+.|++.++.
T Consensus 169 g~~~g~~l~~~~~~~~~~~~-gWr~~f~~~~~~ 200 (434)
T PRK15075 169 AALLGYLLNQWLSPAQMAEW-GWRIPFLIGCLI 200 (434)
T ss_pred HHHHHHHHHHhCCHHHHhcc-chHHHHHHHHHH
Confidence 888777653 344 899999875443
No 36
>PRK03699 putative transporter; Provisional
Probab=99.87 E-value=3.8e-20 Score=172.36 Aligned_cols=171 Identities=17% Similarity=0.193 Sum_probs=150.1
Q ss_pred HHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Q 018453 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (355)
Q Consensus 55 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~ 134 (355)
..++++.+..+......+..+|.+.++ +|+|..+.+++.+.+.+++.+++++.|++.||+|||+.+..+.++.
T Consensus 10 ~~~~~~~~~~~~~~~~~g~~~~~i~~~-------~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~ 82 (394)
T PRK03699 10 WISFLSYALTGALVIVTGMVMGPIAEY-------FNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALM 82 (394)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 344556667777777788888888876 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchh
Q 018453 135 LVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWR 214 (355)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~ 214 (355)
+++.++.+++++++.++++|++.|++.|...+....++.|++|+++|+.+++..+....+|+.++|.+.+.+.....+||
T Consensus 83 ~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~ 162 (394)
T PRK03699 83 ILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWY 162 (394)
T ss_pred HHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHH
Confidence 99999999999999999999999999998888889999999999999999999999999999999999888775434999
Q ss_pred HHHHhHHHHHHHHHHHHh
Q 018453 215 YMYGASTPLAVIMGMGMW 232 (355)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~ 232 (355)
+.|++.+++.++..+..+
T Consensus 163 ~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 163 WVYACIGLVYVAIFILTL 180 (394)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999988877666544433
No 37
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.87 E-value=1.9e-20 Score=173.52 Aligned_cols=167 Identities=17% Similarity=0.224 Sum_probs=148.2
Q ss_pred hhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHh
Q 018453 64 YGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL 143 (355)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~ 143 (355)
..+......+..|.+.++ +|.++.+.+++.+++.++..+++++.|++.||+|||+.+..+.++.+++.++..+
T Consensus 17 ~~~~~~~~~~~~p~~~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~ 89 (385)
T TIGR00710 17 GPLGIDMYLPAFPEIAAD-------LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLAL 89 (385)
T ss_pred HHHHHHHhcccHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence 344555666778887775 8999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHH
Q 018453 144 APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPL 223 (355)
Q Consensus 144 ~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~ 223 (355)
.++++.+++.|++.|++.+...+....++.|++|+++|++.+++.+....+|..+++.+++.+.+.. +||+.|++.+++
T Consensus 90 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~~~~~~~~~~~~ 168 (385)
T TIGR00710 90 SNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL-SWHAIFAFLSLA 168 (385)
T ss_pred HccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999988876 999999988877
Q ss_pred HHHHHHHH-hhcccch
Q 018453 224 AVIMGMGM-WWLPASP 238 (355)
Q Consensus 224 ~~~~~~~~-~~~~esp 238 (355)
.++..+.. ++.||++
T Consensus 169 ~~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 169 GILLSALIFFILPETL 184 (385)
T ss_pred HHHHHHHHHHhCCCCC
Confidence 76655443 4456543
No 38
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.87 E-value=4.4e-20 Score=171.17 Aligned_cols=174 Identities=15% Similarity=0.247 Sum_probs=153.3
Q ss_pred HHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Q 018453 56 FPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYL 135 (355)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~ 135 (355)
...+..+..+.......+.+|.+.++ +|++..+.+++.+.+.+++.+++++.|+++||+|||+.+.++.++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~l~~~~~~-------~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 79 (382)
T PRK10091 7 SLALGTFGLGMAEFGIMGVLTELAHD-------VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCV 79 (382)
T ss_pred HHHHHHHHHHhhHHHHHhChHHHHHH-------cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHH
Confidence 33445566666666777788888776 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhH
Q 018453 136 VGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRY 215 (355)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~ 215 (355)
++.++++++++++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|..+++++++.+.+.. +||+
T Consensus 80 ~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-gwr~ 158 (382)
T PRK10091 80 IGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEF-SWRY 158 (382)
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhc-cHHH
Confidence 999999999999999999999999999888888899999999999999999999999999999999999988876 8999
Q ss_pred HHHhHHHHHHHHHHH-Hhhcccc
Q 018453 216 MYGASTPLAVIMGMG-MWWLPAS 237 (355)
Q Consensus 216 ~~~~~~~~~~~~~~~-~~~~~es 237 (355)
.|++.+++.++..+. .+++||.
T Consensus 159 ~f~~~~~~~~~~~~~~~~~lp~~ 181 (382)
T PRK10091 159 TFLLIAVFNIAVLASIYFWVPDI 181 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCC
Confidence 999988876665443 3446664
No 39
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.87 E-value=1.3e-21 Score=180.47 Aligned_cols=171 Identities=16% Similarity=0.126 Sum_probs=148.6
Q ss_pred HHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Q 018453 61 GLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALV 140 (355)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~ 140 (355)
++.+.++....+...|.+.++ +|++..+.+++.++..++..++.++.|+++||+|||+.++++.++..++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 76 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPYLVEE-------IGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLF 76 (379)
T ss_pred hhHHHHhHHhhhhhhHHHHHH-------hCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHH
Confidence 345556666777778877765 8999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHH-HHHHHhhccccchhHHHHh
Q 018453 141 TALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGY-GIGSLLVDLVAGWRYMYGA 219 (355)
Q Consensus 141 ~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~-~i~~~l~~~~~~w~~~~~~ 219 (355)
.+++++++.+++.|++.|++.+...+....++.|++|+++|++++++.+.+..+|..+++ .++..+.+.. +||+.|++
T Consensus 77 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ 155 (379)
T TIGR00881 77 FGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELY-SWHWVFIV 155 (379)
T ss_pred HHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcC-CchhHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 4666565555 99999998
Q ss_pred HHHHHHHHH-HHHhhcccchh
Q 018453 220 STPLAVIMG-MGMWWLPASPR 239 (355)
Q Consensus 220 ~~~~~~~~~-~~~~~~~esp~ 239 (355)
.+++.++.. +..++.+|+|+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T TIGR00881 156 PGIIAIIVSLICFLLLRDSPQ 176 (379)
T ss_pred HHHHHHHHHHHHheeeCCCcc
Confidence 887766644 44455677654
No 40
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.86 E-value=5.5e-20 Score=174.29 Aligned_cols=177 Identities=15% Similarity=0.061 Sum_probs=141.2
Q ss_pred HHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Q 018453 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (355)
Q Consensus 55 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~ 134 (355)
....+.....+.+....+..+|.+.+ .|++..+.+++.+.+.+++++++++.|+++||+|||++++++.++.
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~p~l~~--------~g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~ 103 (452)
T PRK11273 32 LGIFFGYAAYYLVRKNFALAMPYLVE--------QGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILA 103 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHH
Confidence 33344455555555555666776654 2889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh----hHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHH-HHHHHHHHhhcc
Q 018453 135 LVGALVTALAP----DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMV-GGYGIGSLLVDL 209 (355)
Q Consensus 135 ~~~~~~~~~~~----~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~-~~~~i~~~l~~~ 209 (355)
+++.++.++.+ +++.+++.|++.|++.|...+.....+.|++|+++|++++++++.+..+|.. .+++++..+...
T Consensus 104 ~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 183 (452)
T PRK11273 104 AAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF 183 (452)
T ss_pred HHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh
Confidence 99998887753 6788899999999999988888888899999999999999999999999875 455544333333
Q ss_pred ccchhHHHHhHHHHHHHH-HHHHhhcccchhH
Q 018453 210 VAGWRYMYGASTPLAVIM-GMGMWWLPASPRW 240 (355)
Q Consensus 210 ~~~w~~~~~~~~~~~~~~-~~~~~~~~esp~~ 240 (355)
. +||+.|++.++++++. ++..+++||+|+.
T Consensus 184 ~-gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~ 214 (452)
T PRK11273 184 N-DWHAALYMPAFAAILVALFAFAMMRDTPQS 214 (452)
T ss_pred c-cHHHHHHHHHHHHHHHHHHHHHHccCCHhh
Confidence 3 8999999988776664 4455667887753
No 41
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.86 E-value=2.8e-20 Score=169.91 Aligned_cols=172 Identities=31% Similarity=0.520 Sum_probs=146.8
Q ss_pred HHHHHhhhhhcccccccc-cccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q 018453 59 LGGLLYGYDIGSTSCATI-SIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVG 137 (355)
Q Consensus 59 l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~ 137 (355)
++.+..++......+.+| .+.++ +|.+..+.+++.+++.++..+++++.|+++||+|||+.++++.++.+++
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~ 75 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEE-------LGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALG 75 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCC-------STTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhH
Confidence 344555555556677777 56565 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHH
Q 018453 138 ALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMY 217 (355)
Q Consensus 138 ~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~ 217 (355)
.++..++++.+.++++|++.|++.+...+....++.|++|+++|++++++.+.+..+|.++++.+++.+.+.. +||+.|
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-~~~~~~ 154 (352)
T PF07690_consen 76 SLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF-GWRWAF 154 (352)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC-HHCCHH
T ss_pred HHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc-cccccc
Confidence 6666666888899999999999999999999999999999999999999999999999999999999998776 899999
Q ss_pred HhHHHHHHHHHHH-Hhhcccch
Q 018453 218 GASTPLAVIMGMG-MWWLPASP 238 (355)
Q Consensus 218 ~~~~~~~~~~~~~-~~~~~esp 238 (355)
++.+++.++..++ .+++++++
T Consensus 155 ~~~~~~~~~~~il~~~~~~~~~ 176 (352)
T PF07690_consen 155 LISAILSLIAAILFILFLPEPP 176 (352)
T ss_dssp HHHHHHHHHHHHHHHCCC---S
T ss_pred ccccchhhhhhhhHhhhhhhcc
Confidence 9999998887654 34455443
No 42
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.86 E-value=1.9e-19 Score=172.66 Aligned_cols=180 Identities=23% Similarity=0.397 Sum_probs=158.0
Q ss_pred HHHHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Q 018453 53 PFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAAL 132 (355)
Q Consensus 53 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 132 (355)
....+.++.+..+++.....+..|.+.++ +|++..+.+++.+.+.++++++.++.|+++||+|||+.++.+.+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 93 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQGE-------FGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIV 93 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 44555667777788888888888888775 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 018453 133 LYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAG 212 (355)
Q Consensus 133 l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~ 212 (355)
+.+++.++.++.++++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|.++++.+.+.+.+.. +
T Consensus 94 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~ 172 (496)
T PRK03893 94 LFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVW-G 172 (496)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-C
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998876 9
Q ss_pred hhHHHHhHHHHHHHHHHHHhhcccchhH
Q 018453 213 WRYMYGASTPLAVIMGMGMWWLPASPRW 240 (355)
Q Consensus 213 w~~~~~~~~~~~~~~~~~~~~~~esp~~ 240 (355)
||+.|++.++..++.++.....||++++
T Consensus 173 w~~~f~~~~~~~~~~~~~~~~~p~~~~~ 200 (496)
T PRK03893 173 WRALFFIGILPIIFALWLRKNLPEAEDW 200 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCchhh
Confidence 9999987655544444444456776654
No 43
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.86 E-value=2.7e-22 Score=180.34 Aligned_cols=187 Identities=22% Similarity=0.360 Sum_probs=168.0
Q ss_pred cchHHHHHHHHHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Q 018453 45 YSVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRR 124 (355)
Q Consensus 45 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr 124 (355)
.+++..+...++.++.+.+...+...+..+.+.+... +|++++..|++.+.+.++.++++++.|+++||+.||
T Consensus 26 ~~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~-------fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~ 98 (493)
T KOG1330|consen 26 LSMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTY-------FNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRK 98 (493)
T ss_pred cccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHh-------cCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 3444445555777888889999999888888877765 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 018453 125 RELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGS 204 (355)
Q Consensus 125 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~ 204 (355)
+++.+|..++.++.+.++++.++|.++++|.+.|+|.+...++.+.+++|.+|..+|++.+++++.+..+|..+|.+++.
T Consensus 99 ~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs 178 (493)
T KOG1330|consen 99 RVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGS 178 (493)
T ss_pred eEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccccchhHHHHhHHHHHHHHHHHHhh-cccch
Q 018453 205 LLVDLVAGWRYMYGASTPLAVIMGMGMWW-LPASP 238 (355)
Q Consensus 205 ~l~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~esp 238 (355)
.+......|||.|+..+++.+++.++.++ .+|.+
T Consensus 179 ~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 179 VVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred eeccCccceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 88887756999999999998887665554 55543
No 44
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.86 E-value=1e-19 Score=170.16 Aligned_cols=183 Identities=18% Similarity=0.212 Sum_probs=157.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Q 018453 48 SAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRREL 127 (355)
Q Consensus 48 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~ 127 (355)
+..++..+.+.++.+...+......+.++.+.++ +|.+..+.++..+.+.+++.++.++.|.++||+|||+.+
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l 81 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVED-------FNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVM 81 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH
Confidence 4445555666677777677777777788877775 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 018453 128 ILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV 207 (355)
Q Consensus 128 ~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 207 (355)
+++.++..++.++..+.++++.+++.|++.|++.+...+....++.|.+|+++|++.+++......+|..++|.+++.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~ 161 (406)
T PRK15402 82 LAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALI 161 (406)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888888999999999999999999998888999999999999988
Q ss_pred ccccchhHHHHhHHHHHHHHHHHH-hhcccch
Q 018453 208 DLVAGWRYMYGASTPLAVIMGMGM-WWLPASP 238 (355)
Q Consensus 208 ~~~~~w~~~~~~~~~~~~~~~~~~-~~~~esp 238 (355)
+.. +||+.|++.++++++..+.. +..||++
T Consensus 162 ~~~-~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 162 HVL-PWRGMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred Hcc-CccHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 876 99999998888877655543 3456653
No 45
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.86 E-value=1.7e-21 Score=174.58 Aligned_cols=283 Identities=16% Similarity=0.174 Sum_probs=199.4
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHHhhhhhcccccccccccCCCCCCCc-cccCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 018453 40 PSPENYSVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGIS-WYDLSSVEIGLITSGSLYGALIGSILAFNIA 118 (355)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~ 118 (355)
+......|+....+ +++.++.+.++|+...++.+.+.+....+.+.+ .-++++...+.+..+..+|.++|++++|++.
T Consensus 30 ~~~~g~qw~~fk~i-~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lg 108 (538)
T KOG0252|consen 30 RTSEGLQWKHFKAI-IIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLG 108 (538)
T ss_pred ccccchhHHHHHHH-HHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444566666555 788899999999999999888877653322210 1246778889999999999999999999999
Q ss_pred HHhccHHHHHHHHHHHHHHHHHHHhhhh-------HHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHH
Q 018453 119 DILGRRRELILAALLYLVGALVTALAPD-------FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFF 191 (355)
Q Consensus 119 dr~Grr~~~~~~~~l~~~~~~~~~~~~~-------~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~ 191 (355)
||+|||+++...+++++++++++++... .+++...|+++|+|.|+-+|+..+..+|....+.||...+.+...
T Consensus 109 D~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~ 188 (538)
T KOG0252|consen 109 DKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAM 188 (538)
T ss_pred hhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEe
Confidence 9999999999999999999997776421 467889999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHhhc----cc----------cchhHHHHhHHHHHHHHHHHHhhcccchhHHHHhhccccCchhhhHH
Q 018453 192 IVLGMVGGYGIGSLLVD----LV----------AGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRE 257 (355)
Q Consensus 192 ~~~g~~~~~~i~~~l~~----~~----------~~w~~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~~~~~ 257 (355)
.++|...|.+++..+.. .. .-||..+.+.++++++.+...+.+|||++|.....++. +
T Consensus 189 Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~--------~ 260 (538)
T KOG0252|consen 189 QGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKL--------K 260 (538)
T ss_pred cchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCH--------h
Confidence 88887777776655441 11 14999999999998888888888999999874433111 1
Q ss_pred HHHHHHHHHhCCCCCCCchhHHHHHHHhhccccccccchhhhhhcccchh--HHHHHHHHHHHHhhhhhhHHHHhHHHHH
Q 018453 258 SAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLK--ALIIGAGLVLFQQITGQPSVLYYAASIL 335 (355)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (355)
.+.+..+| .... .+.+..+. +......+.+...+.+....| +.+++....||..-..+|..+.+...++
T Consensus 261 ~a~~d~~k---~~~~-----~~~~~~~~-~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~ 331 (538)
T KOG0252|consen 261 QAAGDMKK---VLSV-----DIEAESTA-ESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIF 331 (538)
T ss_pred hhhhcccc---cccc-----ccchhhcc-ccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHH
Confidence 11111110 0000 00000000 011111122222222222223 6777788888888888999999999999
Q ss_pred HHhcc
Q 018453 336 QDFLQ 340 (355)
Q Consensus 336 ~~~~~ 340 (355)
++++-
T Consensus 332 ~~ig~ 336 (538)
T KOG0252|consen 332 SAIGV 336 (538)
T ss_pred Hhhcc
Confidence 86653
No 46
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.86 E-value=3.8e-19 Score=165.62 Aligned_cols=213 Identities=14% Similarity=0.094 Sum_probs=160.7
Q ss_pred hcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh---
Q 018453 68 IGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA--- 144 (355)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~--- 144 (355)
-...++..+.+.+. ++|+|.++.+++.+++.+++.+++++.|++.||+|.|+++.++.++..+.+++.+++
T Consensus 50 w~~~~~l~~~~~~~------~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~ 123 (462)
T PRK15034 50 WMLFSAVTVNLNKI------GFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQN 123 (462)
T ss_pred HHHHHHHHHHhhhh------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc
Confidence 33445555555441 289999999999999999999999999999999999999999999999999999886
Q ss_pred --hhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh-----cc--------
Q 018453 145 --PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV-----DL-------- 209 (355)
Q Consensus 145 --~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~-----~~-------- 209 (355)
++++.+++.|++.|++ |..++.....+++++|+++||+++|+.....++|..+++++...+. ..
T Consensus 124 ~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~ 202 (462)
T PRK15034 124 PNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQ 202 (462)
T ss_pred cCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 7999999999999998 6688889999999999999999999997777777776666554433 11
Q ss_pred ----ccchhHHHHhHHHHHHHHHHHHhhc-ccchhHHHHhhccccCchhhhHHHHHHHHHHHhCCCCCCCchhHHHHHHH
Q 018453 210 ----VAGWRYMYGASTPLAVIMGMGMWWL-PASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILT 284 (355)
Q Consensus 210 ----~~~w~~~~~~~~~~~~~~~~~~~~~-~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (355)
..+||.+.++.+++.++..++.++. ++.|+
T Consensus 203 ~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~--------------------------------------------- 237 (462)
T PRK15034 203 ADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS--------------------------------------------- 237 (462)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc---------------------------------------------
Confidence 1258888888777776665554443 33221
Q ss_pred hhccccccccchhhhhhcccchhHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHhccc
Q 018453 285 ELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQDFLQP 341 (355)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (355)
++....+..+.+|+|..|.+.+..++.+ .++.++.+|.|+++++..+.
T Consensus 238 -----~~~~~~~~~~vlk~~~~Wllslly~~tF----G~fvg~s~~lp~~~~~~~~~ 285 (462)
T PRK15034 238 -----SRASIADQLPVLQRLHLWLLSLLYLATF----GSFIGFSAGFAMLAKTQFPD 285 (462)
T ss_pred -----cccCHHHHHHHhCCCchhHHHHHHHHHH----HHHHHHHHHHHHHHHHHcCh
Confidence 0112234566788877666666554433 35677888999998886643
No 47
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.86 E-value=4.9e-20 Score=169.76 Aligned_cols=159 Identities=14% Similarity=0.084 Sum_probs=139.9
Q ss_pred ccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHH
Q 018453 70 STSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFII 149 (355)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~ 149 (355)
..++..|.+.++ +|++..+.+++.+++.+++.+++++.|+++||+|||+.+.++.++.+++.++++++++++.
T Consensus 21 ~~~~~~~~~~~~-------~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (377)
T TIGR00890 21 TWTLLAPPLGRY-------FGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAA 93 (377)
T ss_pred hhhhHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHH
Confidence 456677877776 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHH
Q 018453 150 MVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM 229 (355)
Q Consensus 150 ~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~ 229 (355)
++++|++.|++.+..++.....+.+++| ++|+++.++...+..+|.++++++.+.+.+.. +||+.|++.++++++..+
T Consensus 94 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~f~~~~~~~~~~~~ 171 (377)
T TIGR00890 94 LYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLE-GVPAAFIYMGIIFLLVIV 171 (377)
T ss_pred HHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHH
Confidence 9999999999999888888888999987 57999999999999999988777777777665 899999998888777655
Q ss_pred HH-hhcccc
Q 018453 230 GM-WWLPAS 237 (355)
Q Consensus 230 ~~-~~~~es 237 (355)
.. +++++.
T Consensus 172 ~~~~~~~~~ 180 (377)
T TIGR00890 172 LGAFLIGYP 180 (377)
T ss_pred HHHHheecC
Confidence 44 345443
No 48
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.85 E-value=7.3e-20 Score=172.79 Aligned_cols=177 Identities=16% Similarity=0.071 Sum_probs=145.6
Q ss_pred HHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Q 018453 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (355)
Q Consensus 55 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~ 134 (355)
....+................|.+.+ .|++..+.+++.+++.++..++.++.|+++||+|||+.+..+.++.
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~p~~~~--------~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~ 101 (438)
T TIGR00712 30 LGIFFGYAAYYLVRKNFALAMPYLVE--------QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILS 101 (438)
T ss_pred HHHHHHHHHHHHHhccHHhhhHHHHH--------cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHH
Confidence 44444555555555555666676654 5899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh----hhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 018453 135 LVGALVTALA----PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210 (355)
Q Consensus 135 ~~~~~~~~~~----~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 210 (355)
+++.++.++. .+++.+.+.|++.|++.|...+.....+.|++|+++|++++++.+.+..+|+.+++.+.+......
T Consensus 102 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 181 (438)
T TIGR00712 102 AAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF 181 (438)
T ss_pred HHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh
Confidence 9888877654 457778889999999999888888899999999999999999999999999999998877655433
Q ss_pred cchhHHHHhHHHHHHHHH-HHHhhcccchh
Q 018453 211 AGWRYMYGASTPLAVIMG-MGMWWLPASPR 239 (355)
Q Consensus 211 ~~w~~~~~~~~~~~~~~~-~~~~~~~esp~ 239 (355)
.+||+.|++.++++++.. +.++++||+|+
T Consensus 182 ~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~ 211 (438)
T TIGR00712 182 NDWHAALYFPAICAIIVALFAFAMMRDTPQ 211 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 489999999888877654 44556788765
No 49
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.85 E-value=1.2e-19 Score=166.49 Aligned_cols=164 Identities=18% Similarity=0.096 Sum_probs=142.2
Q ss_pred HHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Q 018453 62 LLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVT 141 (355)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~ 141 (355)
+...+........+|.+..+ ++.+..+.+++.+++.++.++++++.|+++||+|||+.++.+.++..++.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~-------~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 9 LISLIGTAITQVALPLYVLA-------GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHH-------hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHH
Confidence 33334444455556666654 68899999999999999999999999999999999999999999988888888
Q ss_pred Hhhh-----hHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHH
Q 018453 142 ALAP-----DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYM 216 (355)
Q Consensus 142 ~~~~-----~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~ 216 (355)
.+.. +++.++++|++.|++.+...+....++.|++|+++|++.+++.+.+..+|.+++|.+++.+.+.. +||+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-g~~~~ 160 (365)
T TIGR00900 82 PFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL-GIKWA 160 (365)
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh-hHHHH
Confidence 8777 89999999999999999999999999999999999999999999999999999999999998877 99999
Q ss_pred HHhHHHHHHHHHHHHhh
Q 018453 217 YGASTPLAVIMGMGMWW 233 (355)
Q Consensus 217 ~~~~~~~~~~~~~~~~~ 233 (355)
|++.++..++..+..++
T Consensus 161 ~~~~~~~~~~~~~~~~~ 177 (365)
T TIGR00900 161 IWVDAVGFAISALLIVS 177 (365)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99887776665544443
No 50
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.85 E-value=2.5e-19 Score=164.94 Aligned_cols=167 Identities=16% Similarity=0.189 Sum_probs=134.4
Q ss_pred hhhhccccccccc-ccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHh
Q 018453 65 GYDIGSTSCATIS-IESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL 143 (355)
Q Consensus 65 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~ 143 (355)
........+..|. +.++ +|++..+.+++.+++.+++++++++.|+++||+|||+.++++.++..++.++.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~ 86 (366)
T TIGR00886 14 FSVWFAFSPLAVQMIKDD-------LGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGL 86 (366)
T ss_pred HHHHHHhHHhhhHHHHHH-------hCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH
Confidence 3344456777775 5554 8999999999999999999999999999999999999999999999999999999
Q ss_pred hh-hHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc---------ccch
Q 018453 144 AP-DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL---------VAGW 213 (355)
Q Consensus 144 ~~-~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~---------~~~w 213 (355)
.+ +++.+++.|++.|++.+. .+....++.|++|+++|++++++...+..+|..+++.+++.+... ..+|
T Consensus 87 ~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w 165 (366)
T TIGR00886 87 AVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAW 165 (366)
T ss_pred HhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 99 999999999999998654 566788999999999999999999988888888777777665531 2379
Q ss_pred hHHHH-hHHHHHHH-HHHHHhhcccchh
Q 018453 214 RYMYG-ASTPLAVI-MGMGMWWLPASPR 239 (355)
Q Consensus 214 ~~~~~-~~~~~~~~-~~~~~~~~~esp~ 239 (355)
|+.|+ +.+++.++ ..+..++.+|+|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (366)
T TIGR00886 166 GWAFVIVPAGILLLPALLIFFVGADTPP 193 (366)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcccCCc
Confidence 99994 43444443 3334445666653
No 51
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.85 E-value=1.6e-19 Score=165.52 Aligned_cols=247 Identities=16% Similarity=0.180 Sum_probs=178.0
Q ss_pred hcccccccccccCCCCCCCccccCChhH-HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhh
Q 018453 68 IGSTSCATISIESPTLSGISWYDLSSVE-IGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPD 146 (355)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~ 146 (355)
....+.+.|.+.++ +|++.++ .|.+.+++..+++++.+++|+++||+|.|+++.++.+.+++..++.+++++
T Consensus 42 R~n~s~a~p~L~~e-------lglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~S 114 (511)
T TIGR00806 42 RPGESFITPYLLTV-------LNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTS 114 (511)
T ss_pred hchHHHHHHHHHHH-------cCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556666766665 8999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHH---hHHHH
Q 018453 147 FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYG---ASTPL 223 (355)
Q Consensus 147 ~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~---~~~~~ 223 (355)
+..+.+.|++.|++.|... ....++..|+|+++|+++.++...+..+|.++++++++. +... |||+.+. +....
T Consensus 115 l~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~-gWr~y~~Ln~Isl~s 191 (511)
T TIGR00806 115 VWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTL-GWISYSTLNIISLVF 191 (511)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhc-CchhHHHHHHHHHHH
Confidence 9999999999999999999 999999999999999999999999999999999999999 4455 8886553 44455
Q ss_pred HHHHHHHHhhcccchhHHHHhhccccCchhhhHHHHHHHHHHHhCCCCCCCchhHHHHHHHhhccccccccchhhhhh--
Q 018453 224 AVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVF-- 301 (355)
Q Consensus 224 ~~~~~~~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 301 (355)
.+++++..+++|..++-+.-++++.. ++. .-.++.....+ +. .+ ..+..+.......+.++
T Consensus 192 ~~~a~~~a~~LP~~~~sl~f~~~~~~-------~~~--~~~~~~~~~~~-~~----~~---~~~~~~~~~~~~~~~l~~~ 254 (511)
T TIGR00806 192 MTFSVFLALFLKRPKRSLFFNRLEDV-------RGA--LPCELDQMVPG-PG----GK---LEDYLGTCRDSFLVRMLSE 254 (511)
T ss_pred HHHHHHHHHhCCCCchhhhhcccccc-------ccc--cccccccCCCC-Cc----cc---cchhhhhhhhHHHHHHHHH
Confidence 55566777888855543332221000 000 00000000000 00 00 00000001111112222
Q ss_pred -cccchhHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHhccc
Q 018453 302 -HGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQDFLQP 341 (355)
Q Consensus 302 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (355)
++-...+.++-..+++....+|.+-+..|.-.+.+.+.++
T Consensus 255 ~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~ 295 (511)
T TIGR00806 255 LVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDES 295 (511)
T ss_pred HHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCC
Confidence 2223346666677888889999999999999999887664
No 52
>PRK10133 L-fucose transporter; Provisional
Probab=99.85 E-value=6.5e-19 Score=165.96 Aligned_cols=148 Identities=22% Similarity=0.320 Sum_probs=131.1
Q ss_pred HHHHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Q 018453 53 PFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAAL 132 (355)
Q Consensus 53 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 132 (355)
.++...+..+..++.....+...|.+.++ +|+++.+.+++.+.+.+++.+++++.|++.||+|||+++.++.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-------~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~ 99 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQFQQA-------FTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLF 99 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 33444555677788888888889988765 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH---HhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 018453 133 LYLVGALVT---ALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV 207 (355)
Q Consensus 133 l~~~~~~~~---~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 207 (355)
+..++.+++ .++++++.++++|++.|+|.|...+..+.++.|+.|+++|+..+++.+..+.+|..+++.+++.+.
T Consensus 100 ~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 100 LYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999875 457899999999999999999999999999999887777777899999999999999999987654
No 53
>PRK11043 putative transporter; Provisional
Probab=99.85 E-value=3.9e-19 Score=165.92 Aligned_cols=163 Identities=18% Similarity=0.220 Sum_probs=143.2
Q ss_pred hhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhh
Q 018453 67 DIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPD 146 (355)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~ 146 (355)
......+.++.+.++ +|.++.+.+++.+++.+++.+++++.|+++||+|||+.+..+.++.+++.++..+.++
T Consensus 21 ~~~~~~p~~~~i~~~-------~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 93 (401)
T PRK11043 21 ATDMYLPAFKAIQAD-------LQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVES 93 (401)
T ss_pred HHHHHHhhHHHHHHH-------HCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence 344455666666665 8999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHH
Q 018453 147 FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (355)
Q Consensus 147 ~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~ 226 (355)
++.+++.|++.|++.+...+....++.|++|+++++...+.......+|..++|.+++.+.+.. +||+.|++.+++.++
T Consensus 94 ~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-g~~~~~~~~~~~~~~ 172 (401)
T PRK11043 94 AAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF-GWQAIFATLFAITLL 172 (401)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHH
Confidence 9999999999999988888888889999999999999999999999999999999999998887 999999988888777
Q ss_pred HHHHHhhcccc
Q 018453 227 MGMGMWWLPAS 237 (355)
Q Consensus 227 ~~~~~~~~~es 237 (355)
..+..++++++
T Consensus 173 ~~~~~~~~~~~ 183 (401)
T PRK11043 173 LILPTLRLKPS 183 (401)
T ss_pred HHHHHHHcCCC
Confidence 66555555544
No 54
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.85 E-value=2.3e-20 Score=182.43 Aligned_cols=175 Identities=19% Similarity=0.290 Sum_probs=150.3
Q ss_pred HHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Q 018453 56 FPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYL 135 (355)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~ 135 (355)
..++..+..+...+..+..++.+.++ ++++..+.|++.+.+.+++.++.++.+++.||+|||+.+.++.++++
T Consensus 37 ~~~~~~~~~~~~~g~~~~~l~~iek~-------F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~ 109 (633)
T TIGR00805 37 LLTCAQLQGLLYNGLVNSSLTTIERR-------FKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMG 109 (633)
T ss_pred HHHHHHHHHHHHHHHHHhhchhhhhh-------hCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHH
Confidence 33445555566677888888888886 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh---------------------------------------------------hHHHHHHHHHHHHHHHhhH
Q 018453 136 VGALVTALAP---------------------------------------------------DFIIMVVGRFVFGIGIGLA 164 (355)
Q Consensus 136 ~~~~~~~~~~---------------------------------------------------~~~~~~~~r~l~G~~~g~~ 164 (355)
++.++.++.+ .+..++++|++.|+|.+..
T Consensus 110 lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~ 189 (633)
T TIGR00805 110 LGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPI 189 (633)
T ss_pred HHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcc
Confidence 9999987753 2456778999999999999
Q ss_pred HhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc---------------------cchhHHHHhHHHH
Q 018453 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV---------------------AGWRYMYGASTPL 223 (355)
Q Consensus 165 ~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~---------------------~~w~~~~~~~~~~ 223 (355)
++....++.|++|+++|+.++++++.+..+|.++|+++++.+.+.. ++|+..|++.+++
T Consensus 190 ~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l 269 (633)
T TIGR00805 190 FPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGV 269 (633)
T ss_pred hhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999887532 1377788888888
Q ss_pred HHHHHHHHhhcccc
Q 018453 224 AVIMGMGMWWLPAS 237 (355)
Q Consensus 224 ~~~~~~~~~~~~es 237 (355)
.++..+.++++|++
T Consensus 270 ~~l~~v~l~~~p~~ 283 (633)
T TIGR00805 270 ALLTSIPFFFFPKA 283 (633)
T ss_pred HHHHHHHHHhCccc
Confidence 77766666666654
No 55
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.84 E-value=5.4e-19 Score=164.56 Aligned_cols=164 Identities=18% Similarity=0.254 Sum_probs=143.2
Q ss_pred hhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhh
Q 018453 67 DIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPD 146 (355)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~ 146 (355)
......+.+|.+.++ +|++..+.+++.+.+.+++.+++++.|.++||+|||+.+..+.++..++.++..+.++
T Consensus 23 ~~~~~~p~~~~i~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~ 95 (394)
T PRK11652 23 AQTIYVPAIADMARD-------LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHS 95 (394)
T ss_pred HHHHHhccHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHcc
Confidence 333455667777765 8999999999999999999999999999999999999999999999999999988999
Q ss_pred HHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHH
Q 018453 147 FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (355)
Q Consensus 147 ~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~ 226 (355)
++.+++.|++.|++.+...+....+..|.+++++|+.+.++...+..+|..++|.+++.+.+.. +||+.|++.+++.++
T Consensus 96 ~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-g~~~~f~~~~~~~~~ 174 (394)
T PRK11652 96 LTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLF-GWRACYLFLLLLGAG 174 (394)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ChHHHHHHHHHHHHH
Confidence 9999999999999998888888888999999999999999999999999999999999988776 899999988777665
Q ss_pred HHH-HHhhcccch
Q 018453 227 MGM-GMWWLPASP 238 (355)
Q Consensus 227 ~~~-~~~~~~esp 238 (355)
..+ ..++.||++
T Consensus 175 ~~~~~~~~~~~~~ 187 (394)
T PRK11652 175 VTFSMARWMPETR 187 (394)
T ss_pred HHHHHHHhCCccC
Confidence 443 345567654
No 56
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.84 E-value=6.1e-19 Score=164.72 Aligned_cols=170 Identities=19% Similarity=0.266 Sum_probs=148.4
Q ss_pred HHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Q 018453 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (355)
Q Consensus 55 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~ 134 (355)
+.+++..+..|+.....++.+|.++++ +|++..+.|++.+.+.+++.+++++.|++.||+|||+.++++.++.
T Consensus 6 ~~~~~~f~~~G~~~~~~~~l~~~~~~~-------~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~ 78 (410)
T TIGR00885 6 ALITSLFALWGFANDITNPMVPQFQQA-------FTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLY 78 (410)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHH
Confidence 445566677788888888999998876 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHh---hhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc-
Q 018453 135 LVGALVTAL---APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV- 210 (355)
Q Consensus 135 ~~~~~~~~~---~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~- 210 (355)
+++.++... .++++.+++.|++.|+|.|...+....++.+..|+++|++.+++.+.+.++|..+++.+++.+....
T Consensus 79 ~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~ 158 (410)
T TIGR00885 79 ALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNL 158 (410)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999887644 3579999999999999999999999999999999999999999999999999999999998875321
Q ss_pred ------------------------cchhHHHHhHHHHHHHHHHHH
Q 018453 211 ------------------------AGWRYMYGASTPLAVIMGMGM 231 (355)
Q Consensus 211 ------------------------~~w~~~~~~~~~~~~~~~~~~ 231 (355)
.+||++|++.+++.++..+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 159 PHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred ccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 269999998888766654443
No 57
>PRK10504 putative transporter; Provisional
Probab=99.84 E-value=3.3e-18 Score=163.07 Aligned_cols=172 Identities=17% Similarity=0.297 Sum_probs=151.3
Q ss_pred HHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Q 018453 57 PALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLV 136 (355)
Q Consensus 57 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~ 136 (355)
++++.++..++....++.+|.+.++ +|.+..+.+++.+.+.++..++.++.|+++||+|||+.++.+.++..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~~~~-------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~ 87 (471)
T PRK10504 15 VAFGFFMQSLDTTIVNTALPSMAQS-------LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTL 87 (471)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHH-------hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHH
Confidence 3445566666777777888888876 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHH
Q 018453 137 GALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYM 216 (355)
Q Consensus 137 ~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~ 216 (355)
+.+++.++++.+.++++|++.|++.+...+....++.|++|+++|+++.++......+|..++|.+++.+.+.. +||+.
T Consensus 88 ~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~-gw~~~ 166 (471)
T PRK10504 88 GSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYA-SWHWI 166 (471)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhc-cHHHH
Confidence 99988888999999999999999999999999999999999999999999999999999999999999999887 99999
Q ss_pred HHhHHHHHHHHHHHHhh-ccc
Q 018453 217 YGASTPLAVIMGMGMWW-LPA 236 (355)
Q Consensus 217 ~~~~~~~~~~~~~~~~~-~~e 236 (355)
|++..+++++..+.... .|+
T Consensus 167 f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 167 FLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred HHHHHHHHHHHHHHHHHhCCC
Confidence 99987776665544433 444
No 58
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.83 E-value=3e-18 Score=158.84 Aligned_cols=148 Identities=24% Similarity=0.286 Sum_probs=134.9
Q ss_pred HHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Q 018453 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (355)
Q Consensus 55 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~ 134 (355)
..+.++.+..+......++.+|.+.++ +|.|..+.|++.+.+.+++.+++++.|+++||+|||+.+..+.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~lp~~~~~-------~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~ 81 (381)
T PRK03633 9 LLLLCGLLLLTLAIAVLNTLVPLWLAQ-------EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIF 81 (381)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 334455666777888888999999886 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018453 135 LVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (355)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 209 (355)
+++.++.+++++++.++++|++.|++.+...+.....+.+..++++|+++++++..+..+|..+|+.+++.+.+.
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 82 AAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 999999999999999999999999999988888888888999999999999999999999999999999988764
No 59
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.83 E-value=1.8e-18 Score=160.97 Aligned_cols=158 Identities=22% Similarity=0.298 Sum_probs=141.3
Q ss_pred ccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 018453 72 SCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMV 151 (355)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~ 151 (355)
.+.+|.+.++ +|.+..+.++..+.+.++..+++++.|+++||+|||+.++.+.++..++.++..+.++++.++
T Consensus 23 ~~~lp~~~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~ 95 (392)
T PRK10473 23 LVGLPRIAAD-------LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFL 95 (392)
T ss_pred hhhHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHH
Confidence 3567777765 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHH-
Q 018453 152 VGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMG- 230 (355)
Q Consensus 152 ~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~- 230 (355)
+.|++.|++.+...+....++.|++|+++|++++++.+....+|..++|.+++.+.+.. +|++.|++.++++++..+.
T Consensus 96 ~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~-g~~~~~~~~~~~~~i~~~~~ 174 (392)
T PRK10473 96 AGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKF-PWQSLFYTMAAMGILVLLLS 174 (392)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-ChHHHHHHHHHHHHHHHHHH
Confidence 99999999999889999999999999999999999999999999999999998887776 8999999988777665444
Q ss_pred Hhhcccc
Q 018453 231 MWWLPAS 237 (355)
Q Consensus 231 ~~~~~es 237 (355)
.+++||+
T Consensus 175 ~~~~~~~ 181 (392)
T PRK10473 175 LFILKET 181 (392)
T ss_pred HHHcCCC
Confidence 4456665
No 60
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.82 E-value=1.4e-18 Score=161.69 Aligned_cols=145 Identities=14% Similarity=0.089 Sum_probs=127.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (355)
++.+..+.+++.+.+.+++.++.++.|+++||+|||++++++.++.+++.+++.+..+. ++.|+++|++.+...+..
T Consensus 33 ~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~ 109 (393)
T PRK11195 33 LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAK 109 (393)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
Confidence 68888999999999999999999999999999999999999999999888877776554 678999999999999999
Q ss_pred HHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhcccch
Q 018453 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASP 238 (355)
Q Consensus 169 ~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~esp 238 (355)
..++.|++|+++|++++++.+....+|.++||.+++.+.+. .|+..+.+.+.+.++..+..+.+||+|
T Consensus 110 ~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~--~~~~~~~i~~~~~~~~~~~~~~l~~~~ 177 (393)
T PRK11195 110 YGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP--HAEAALAVCALIYLLAALFNLFIPRLG 177 (393)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 99999999999999999999999999999999999999874 477777766655555555556677765
No 61
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.82 E-value=1.6e-18 Score=160.30 Aligned_cols=161 Identities=17% Similarity=0.281 Sum_probs=144.4
Q ss_pred ccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHH
Q 018453 70 STSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFII 149 (355)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~ 149 (355)
...+.+|.+.++ +|++..+.+++.+++.++..++.++.|+++||+|||+.+..+.++.+++.+++.+.++++.
T Consensus 9 ~~~p~~~~~~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 81 (377)
T PRK11102 9 MYLPALPVIAAD-------FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQ 81 (377)
T ss_pred HHhccHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHH
Confidence 345667777765 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHH
Q 018453 150 MVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM 229 (355)
Q Consensus 150 ~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~ 229 (355)
+++.|++.|++.+...+....++.|++|+++|++++++.+.+..+|..++|.+++.+.+.. +||+.|++.++++++..+
T Consensus 82 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~ 160 (377)
T PRK11102 82 LIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF-SWHAIFWVLALAAILAAA 160 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ChHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998876 899999988887776544
Q ss_pred H-Hhhcccch
Q 018453 230 G-MWWLPASP 238 (355)
Q Consensus 230 ~-~~~~~esp 238 (355)
. .++.||++
T Consensus 161 ~~~~~~~~~~ 170 (377)
T PRK11102 161 LVFFFIPETL 170 (377)
T ss_pred HHHHhCCccC
Confidence 3 44566653
No 62
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.82 E-value=1.9e-18 Score=163.76 Aligned_cols=157 Identities=14% Similarity=0.147 Sum_probs=136.3
Q ss_pred cccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHH
Q 018453 69 GSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFI 148 (355)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~ 148 (355)
...+..++.+.++ +|++..+.+++.+.+.++..++.++.|+++||+|||+.++.+.++.+++.++++++++++
T Consensus 36 ~~~~~~~~~i~~~-------~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~ 108 (455)
T TIGR00892 36 KAVTVFFKELQQI-------FQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVI 108 (455)
T ss_pred cchhhhHHHHHHH-------hCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHH
Confidence 4456667777765 899999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHH-HHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHH
Q 018453 149 IMVV-GRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIM 227 (355)
Q Consensus 149 ~~~~-~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~ 227 (355)
.+++ .|++.|++.+...+....++.++++ ++|++++++.+.+..+|..++|.+++.+.+.. |||+.|++.+++.++.
T Consensus 109 ~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~-gwr~~f~~~~~~~~~~ 186 (455)
T TIGR00892 109 ELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESF-GWRGSFLILGGLLLHC 186 (455)
T ss_pred HHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHH
Confidence 8765 5789999988776777788889996 78999999999999999999999999988877 9999999998887765
Q ss_pred HHHHhhc
Q 018453 228 GMGMWWL 234 (355)
Q Consensus 228 ~~~~~~~ 234 (355)
.+..+++
T Consensus 187 ~v~~~~~ 193 (455)
T TIGR00892 187 CVCGALM 193 (455)
T ss_pred HHHHHHh
Confidence 5544443
No 63
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.81 E-value=2.3e-18 Score=160.59 Aligned_cols=159 Identities=20% Similarity=0.220 Sum_probs=133.3
Q ss_pred HHhhhhhcccccccccc-cCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Q 018453 62 LLYGYDIGSTSCATISI-ESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALV 140 (355)
Q Consensus 62 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~ 140 (355)
+...+......+.+|.. .++ +|.|..+.|++.+++.+++.+++++.|+++||+|||++++.+.++.+++.++
T Consensus 25 ~~~~~~~~~~~~~l~~~i~~~-------~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~ 97 (399)
T PRK05122 25 FISYLTIGLPLAVLPGYVHDQ-------LGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLL 97 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-------cCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHH
Confidence 33444455556667764 343 7999999999999999999999999999999999999999999888877665
Q ss_pred HHhh--------hhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 018453 141 TALA--------PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAG 212 (355)
Q Consensus 141 ~~~~--------~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~ 212 (355)
+.+. .+++.+++.|++.|++.+...+....++.|+.|+++|++++++......+|.++|+.+++.+.+.. +
T Consensus 98 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-g 176 (399)
T PRK05122 98 YLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWG-G 176 (399)
T ss_pred HHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcc-c
Confidence 5442 246688999999999999999999999999999999999999999999999999999999998877 8
Q ss_pred hhHHHHhHHHHHHHHH
Q 018453 213 WRYMYGASTPLAVIMG 228 (355)
Q Consensus 213 w~~~~~~~~~~~~~~~ 228 (355)
|++.+++.+++.++..
T Consensus 177 ~~~~~~~~~~~~~~~~ 192 (399)
T PRK05122 177 LAGLGLLIMLLALLGL 192 (399)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9998887666554433
No 64
>PRK12382 putative transporter; Provisional
Probab=99.81 E-value=7.9e-18 Score=156.63 Aligned_cols=150 Identities=17% Similarity=0.243 Sum_probs=126.4
Q ss_pred hhcccccccccc-cCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHh--
Q 018453 67 DIGSTSCATISI-ESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL-- 143 (355)
Q Consensus 67 ~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~-- 143 (355)
......+.+|.+ .++ +|+|..+.|++.+++.+++.+++++.|+++||+|||+.++.+.++..++.+....
T Consensus 30 ~~~~~~p~l~~~l~~~-------lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~ 102 (392)
T PRK12382 30 TVGLPLPVIPLFVHHD-------LGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAA 102 (392)
T ss_pred HHHHHhhhhhHHHHHh-------cCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhh
Confidence 444555666654 343 8999999999999999999999999999999999999999988877766543221
Q ss_pred ------hhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHH
Q 018453 144 ------APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMY 217 (355)
Q Consensus 144 ------~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~ 217 (355)
..+++.++++|++.|++.+...+....++.|++|+++|++++++.+.+..+|.+++|++++.+.+.. ||++.+
T Consensus 103 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~-g~~~~~ 181 (392)
T PRK12382 103 ILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHF-GFAALA 181 (392)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhcc-ChHHHH
Confidence 2578889999999999999888888899999999999999999999999999999999999988776 899877
Q ss_pred HhHHHHH
Q 018453 218 GASTPLA 224 (355)
Q Consensus 218 ~~~~~~~ 224 (355)
.+..+..
T Consensus 182 ~~~~~~~ 188 (392)
T PRK12382 182 LTTMVLP 188 (392)
T ss_pred HHHHHHH
Confidence 6654443
No 65
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.80 E-value=1.1e-17 Score=155.90 Aligned_cols=146 Identities=21% Similarity=0.245 Sum_probs=132.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (355)
+|++..+.|++.+...++..+.+++.|+++||+|||+.+..+.++.+++.+++.+.++++.+++.|++.|++.+...+..
T Consensus 41 ~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~ 120 (400)
T PRK11646 41 LGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPR 120 (400)
T ss_pred hCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred HHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHH-Hhhccc
Q 018453 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMG-MWWLPA 236 (355)
Q Consensus 169 ~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~e 236 (355)
..++.|++|+++|++++++......+|..+||.+++.+. .. +|++.|++.++.+++..+. .++.||
T Consensus 121 ~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~-g~~~~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 121 TALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QY-DFRLVCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-hHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 999999999999999999999999999999999999998 54 8999999888776665433 333443
No 66
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.80 E-value=1.1e-17 Score=154.51 Aligned_cols=171 Identities=22% Similarity=0.190 Sum_probs=138.6
Q ss_pred HHHhhhhhccccccccccc-CCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH-HHHHHHHHH
Q 018453 61 GLLYGYDIGSTSCATISIE-SPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELIL-AALLYLVGA 138 (355)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~-~~~l~~~~~ 138 (355)
++..++......+.+|.+. ++ +|.+..+.|++.+.+.++..+.+++.|.++||+|||+.+++ +.++.+++.
T Consensus 6 ~~~~~~~~~~~~~~l~~~l~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~ 78 (375)
T TIGR00899 6 AFLTGIAGALQFPTLSLFLSEE-------VRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALAC 78 (375)
T ss_pred HHHHHHHHHHHhhHHHHHHHcc-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHH
Confidence 4555556666667777654 43 79999999999999999999999999999999999886554 566666777
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHH--HHHHHHHHHHHHHHHHHHHHHhhccccchhHH
Q 018453 139 LVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQL--ISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYM 216 (355)
Q Consensus 139 ~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~--~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~ 216 (355)
++.+++++++.+++.|++.|.+.+...+....+..|+.|++.|+.. .+....+.++|.++++.+++.+.+.. +||+.
T Consensus 79 ~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~ 157 (375)
T TIGR00899 79 LLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGF-GFTVM 157 (375)
T ss_pred HHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc-ccHHH
Confidence 7888889999999999999888777788888888999887777754 57788888999999999999998876 89999
Q ss_pred HHhHHHHHHHHHHH-Hhhcccchh
Q 018453 217 YGASTPLAVIMGMG-MWWLPASPR 239 (355)
Q Consensus 217 ~~~~~~~~~~~~~~-~~~~~esp~ 239 (355)
|++.+++.++..+. ++++||.|+
T Consensus 158 f~~~~~~~~~~~~~~~~~~~~~~~ 181 (375)
T TIGR00899 158 FLTAALAFVLCGVLVWLFLPSYPR 181 (375)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccc
Confidence 99988877765544 445787653
No 67
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.79 E-value=1.2e-17 Score=153.36 Aligned_cols=149 Identities=21% Similarity=0.226 Sum_probs=130.5
Q ss_pred cccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHH
Q 018453 69 GSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFI 148 (355)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~ 148 (355)
...++.+|.+.++ +|++..+.+++.+.+.+++.++.++.|+++||+|||+.+.++.++..++.++. ..++.+
T Consensus 17 ~~~~~~lp~l~~~-------~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~ 88 (355)
T TIGR00896 17 TSVGPLLPQIRSA-------LGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTA 88 (355)
T ss_pred ccCcccHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHH
Confidence 4567788888876 89999999999999999999999999999999999999999998888888777 678889
Q ss_pred HHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccc-chhHHHHhHHHHHHH
Q 018453 149 IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVA-GWRYMYGASTPLAVI 226 (355)
Q Consensus 149 ~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~-~w~~~~~~~~~~~~~ 226 (355)
.+++.|++.|++.+...+..+.++.|++| ++|++++++.+....+|..+++.+.+.+.+... +||+.|.+.+++.++
T Consensus 89 ~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~ 166 (355)
T TIGR00896 89 LLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALL 166 (355)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 99999999999999888888888999886 689999999999999999999999988876542 499998876655443
No 68
>PRK10054 putative transporter; Provisional
Probab=99.79 E-value=1.5e-17 Score=154.89 Aligned_cols=147 Identities=18% Similarity=0.207 Sum_probs=131.0
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (355)
+|++..+.|++.+.+.++..+++++.|+++||+|||+.++++.++.+++.++.++.++++.++++|++.|.+.+...+..
T Consensus 38 ~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 117 (395)
T PRK10054 38 YSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVL 117 (395)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999989999999988889999998888788888
Q ss_pred HHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHH-hhcccc
Q 018453 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGM-WWLPAS 237 (355)
Q Consensus 169 ~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~es 237 (355)
..+..|..|+++|++++++.....++|.+++|.+++.+.. . +|+..|++.+++.++..+.. +++|++
T Consensus 118 ~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~-g~~~~f~~~~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 118 KAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-Q-SINLPFWLAAICSAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-ccCcHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999998875 4 89999998887777654433 335543
No 69
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.79 E-value=3.9e-17 Score=152.64 Aligned_cols=169 Identities=20% Similarity=0.153 Sum_probs=140.4
Q ss_pred HHHHhhhhhcccccccccccCCCCCCCccccCChhH-----HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Q 018453 60 GGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVE-----IGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (355)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-----~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~ 134 (355)
+.++.+.......+.+|.+.++ +|++..+ .+++.++..++..+++++.|+++||+|||+.++.+.++.
T Consensus 22 ~~~~~~~~~~~~~~~l~~~~~~-------~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 94 (408)
T PRK09874 22 GCFLTGAAFSLVMPFLPLYVEQ-------LGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGM 94 (408)
T ss_pred HHHHHHHHHHHhhhhHHHHHHH-------hCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHH
Confidence 3344455555566777777765 6776543 488999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchh
Q 018453 135 LVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWR 214 (355)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~ 214 (355)
+++.++..+.++++.+++.|++.|++.+ ..+....++.+.+|+++|++++++......+|.+++|.+++.+.+.. +||
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~ 172 (408)
T PRK09874 95 GIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSY-GLR 172 (408)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHH
Confidence 9999888888999999999999999865 45677788899999999999999999999999999999999988876 899
Q ss_pred HHHHhHHHHHHHHHHHH-hhcccc
Q 018453 215 YMYGASTPLAVIMGMGM-WWLPAS 237 (355)
Q Consensus 215 ~~~~~~~~~~~~~~~~~-~~~~es 237 (355)
+.|++.+++.++..+.. ++++|+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 173 PVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999888776655443 445554
No 70
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.78 E-value=2e-17 Score=158.42 Aligned_cols=176 Identities=16% Similarity=0.026 Sum_probs=136.8
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH---HHhhhhHHHHHHHHHHHHHHHhhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALV---TALAPDFIIMVVGRFVFGIGIGLAM 165 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~r~l~G~~~g~~~ 165 (355)
+|++..+.++..+...++..++.++.|+++||+|||+.+.++.++..+..+. ....++...+++++++.|++.+...
T Consensus 281 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 360 (490)
T PRK10642 281 LHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFT 360 (490)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 6788888888888889999999999999999999999888777654433322 2223456777888999998888777
Q ss_pred hHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhcccchhHHHHhh
Q 018453 166 HAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCA 245 (355)
Q Consensus 166 ~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~ 245 (355)
.....++.|.+|++.|++++++.+....+++.++|.+.+++.+..++|+..+++..+++++.++..+++||+|+|+.++.
T Consensus 361 g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~~~~~~ 440 (490)
T PRK10642 361 GVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETANRPLKGA 440 (490)
T ss_pred HHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccCCCCCCc
Confidence 77888899999999999999985555666678899999988876546887777777777777777777899999876542
Q ss_pred ccccCchhhhHHHHHHHHHHHhC
Q 018453 246 MKRKGDMQDLRESAISCLCRLRG 268 (355)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~ 268 (355)
. +.+++.+|+++.++++++
T Consensus 441 ~----~~~~~~~~a~~~l~~~~~ 459 (490)
T PRK10642 441 T----PAASDIQEAKEILVEHYD 459 (490)
T ss_pred c----ccccchhhHHHHhhcccc
Confidence 1 123467899999999984
No 71
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.78 E-value=1e-17 Score=149.81 Aligned_cols=216 Identities=18% Similarity=0.125 Sum_probs=172.3
Q ss_pred cccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhh---H
Q 018453 71 TSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPD---F 147 (355)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~---~ 147 (355)
.++..+.+.++ +|+|+.|.+++.++..+...+..++.|.+.||||.|++..++.++..+..+..+++.. +
T Consensus 33 ~s~l~~~i~~~-------~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~ 105 (417)
T COG2223 33 FSPLGVFIKSD-------FGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPST 105 (417)
T ss_pred HHHHHhhhccc-------cCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCch
Confidence 34444555554 8999999999999999999999999999999999999999999999999999988754 5
Q ss_pred HHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccc---hhHHHHhHHHHH
Q 018453 148 IIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAG---WRYMYGASTPLA 224 (355)
Q Consensus 148 ~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~---w~~~~~~~~~~~ 224 (355)
+.+++.+++.|++.+ .+.+...++++++|++++|.++|+.. ..++|..+...++..++... + |+.+..+..+..
T Consensus 106 ~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~-g~~~w~~~~~i~~~~l 182 (417)
T COG2223 106 WQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAF-GFLAWRNVAGIYVVAL 182 (417)
T ss_pred HHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHH
Confidence 599999999999755 67788889999999999999999999 99999999988888888777 6 999998888887
Q ss_pred HHHHH-HHhhcccchhHHHHhhccccCchhhhHHHHHHHHHHHhCCCCCCCchhHHHHHHHhhccccccccchhhhhhcc
Q 018453 225 VIMGM-GMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHG 303 (355)
Q Consensus 225 ~~~~~-~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (355)
++..+ .++...|.|+..... ++..+..++.++++
T Consensus 183 ~v~~v~~~~~~~d~p~~r~~~---------------------------------------------~~~~~~~~~~v~~~ 217 (417)
T COG2223 183 AIAAVLAWLGMNDVPEHRASV---------------------------------------------KPQLPAQLKAVFSN 217 (417)
T ss_pred HHHHHHHHHHhCCChhhhccc---------------------------------------------cccchhHHHHHhcC
Confidence 77544 455577776531100 01111456677877
Q ss_pred cchhHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHhccccchh
Q 018453 304 KCLKALIIGAGLVLFQQITGQPSVLYYAASILQDFLQPLMQH 345 (355)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (355)
++.|.+.+..+..|. ++.+++.|.|.++++..+....+
T Consensus 218 ~~~W~lsllY~~tFG----~Fvgfs~~l~~~~~~~fg~~~~~ 255 (417)
T COG2223 218 KDTWLLSLLYFATFG----GFVGFSAYLPMYLVTQFGLSPVT 255 (417)
T ss_pred cchHHHHHHHHHHHH----HHHHHHHHHHHHHHHhcCCChhh
Confidence 777776665555554 57889999999999887765544
No 72
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.78 E-value=3.5e-17 Score=152.83 Aligned_cols=134 Identities=15% Similarity=0.135 Sum_probs=116.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH---h-hhhHHHHHHHHHHHHHHHhhH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA---L-APDFIIMVVGRFVFGIGIGLA 164 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~---~-~~~~~~~~~~r~l~G~~~g~~ 164 (355)
+|++..+.+++.+.+.+++.+++++.|++.||+|||+.+..+.++.++++++.. + .++++.+++.|++.|++.+..
T Consensus 43 ~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~ 122 (402)
T TIGR00897 43 LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLF 122 (402)
T ss_pred hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHH
Confidence 799999999999999999999999999999999999999999999888876543 3 257888889999999998887
Q ss_pred HhHHHHHHHhhcCCCchhHHHHHHHHHHHHHH-HHHHHHHHHhhccccchhHHHHhHHHH
Q 018453 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLGM-VGGYGIGSLLVDLVAGWRYMYGASTPL 223 (355)
Q Consensus 165 ~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~-~~~~~i~~~l~~~~~~w~~~~~~~~~~ 223 (355)
.+....++.+++|+++|++++|+.+.+.++|. .+++.+++.+.+.. ||+..++.....
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~-g~~~~~~~~~~~ 181 (402)
T TIGR00897 123 AYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAF-GEMNTLWSALAF 181 (402)
T ss_pred HhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-chHHHHHHHHHH
Confidence 77788888999999999999999999999997 68999998888776 776665544433
No 73
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.78 E-value=3.6e-17 Score=149.02 Aligned_cols=170 Identities=35% Similarity=0.521 Sum_probs=151.9
Q ss_pred HHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q 018453 58 ALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVG 137 (355)
Q Consensus 58 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~ 137 (355)
.+..+..++......+..+.+.++ +|.+..+.+++.+...++..++.++.|+++||+|||+.+..+.++..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~ 77 (352)
T cd06174 5 FLGFFLSGLDRGLLSPALPLLAED-------LGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALG 77 (352)
T ss_pred HHHHHHHHHhhhhhHhhHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHH
Confidence 344556666666777777877775 6899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHH
Q 018453 138 ALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMY 217 (355)
Q Consensus 138 ~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~ 217 (355)
.++..+.++++.+++.|++.|++.+...+....++.|++|+++|++.+++.+....+|..+++.+++.+.+.. +|++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~ 156 (352)
T cd06174 78 SLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESL-GWRWLF 156 (352)
T ss_pred HHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998876 899999
Q ss_pred HhHHHHHHHHHHHHhhcc
Q 018453 218 GASTPLAVIMGMGMWWLP 235 (355)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~ 235 (355)
++.+++.++..+..++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~ 174 (352)
T cd06174 157 LILAILGLLLALLLLFLL 174 (352)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 998888777665554443
No 74
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.77 E-value=9e-18 Score=157.58 Aligned_cols=162 Identities=21% Similarity=0.180 Sum_probs=136.5
Q ss_pred cccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHh-----
Q 018453 69 GSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL----- 143 (355)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~----- 143 (355)
....+.+|.+.++ ++.+..+.|++.+.+.+++.+++++.|+++||+|||+.+..+.++.+++.++.+.
T Consensus 34 ~~~~~~~~~~~~~-------~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 106 (417)
T PRK10489 34 GLLGVAVPVQIQM-------MTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLP 106 (417)
T ss_pred HHHHHHHHHHHHH-------HHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcC
Confidence 3444556666554 6778999999999999999999999999999999999998888877776665432
Q ss_pred hhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHH
Q 018453 144 APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPL 223 (355)
Q Consensus 144 ~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~ 223 (355)
.++++.+++.|++.|++.+...+....++.|+.|+++|+++.++.+....+|..+||.+++.+.+.. +|++.|++.++.
T Consensus 107 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~-~~~~~~~~~~~~ 185 (417)
T PRK10489 107 EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAG-GVAWNYGLAAAG 185 (417)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHH-hhHHHHHHHHHH
Confidence 4578888899999999998888888999999999999999999999999999999999999988776 899999988877
Q ss_pred HHHHHHHHhhcccch
Q 018453 224 AVIMGMGMWWLPASP 238 (355)
Q Consensus 224 ~~~~~~~~~~~~esp 238 (355)
.++..+..+.+|+++
T Consensus 186 ~~~~~~~~~~l~~~~ 200 (417)
T PRK10489 186 TFITLLPLLRLPALP 200 (417)
T ss_pred HHHHHHHHHhCCCCC
Confidence 776666666666643
No 75
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.77 E-value=3.6e-17 Score=151.53 Aligned_cols=149 Identities=24% Similarity=0.362 Sum_probs=119.9
Q ss_pred CChhHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHH--------HHHHHHHHH
Q 018453 91 LSSVEIGLITSG-----SLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFI--------IMVVGRFVF 157 (355)
Q Consensus 91 ~s~~~~~~~~~~-----~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~--------~~~~~r~l~ 157 (355)
.++.+.+.+.+. ..++..+++++.|+++||+|||+.++++.++..++.++.+++++++ .++++|++.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 106 (394)
T TIGR00883 27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQ 106 (394)
T ss_pred CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHH
Confidence 344455544432 3344457899999999999999999999999999999999988764 478899999
Q ss_pred HHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhc-------cccchhHHHHhHHHHHHHHHHH
Q 018453 158 GIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD-------LVAGWRYMYGASTPLAVIMGMG 230 (355)
Q Consensus 158 G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~-------~~~~w~~~~~~~~~~~~~~~~~ 230 (355)
|++.+...+....++.|++|+++|++..++.+.+..+|.++++.++..+.. ...+||+.|++.+++.++..+.
T Consensus 107 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 186 (394)
T TIGR00883 107 GFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYL 186 (394)
T ss_pred HhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988776542 1238999999877776665555
Q ss_pred Hhhcccchh
Q 018453 231 MWWLPASPR 239 (355)
Q Consensus 231 ~~~~~esp~ 239 (355)
....+|+|+
T Consensus 187 ~~~~~~~~~ 195 (394)
T TIGR00883 187 RRNLEETPV 195 (394)
T ss_pred HHhcCCChh
Confidence 555666654
No 76
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.76 E-value=2.8e-17 Score=156.36 Aligned_cols=185 Identities=18% Similarity=0.251 Sum_probs=143.4
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Q 018453 46 SVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRR 125 (355)
Q Consensus 46 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~ 125 (355)
..++.+..+...++......+.....+..++.+..+ +|-+ ....|+.+...++..++.++.|+++|.||||.
T Consensus 38 ~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~d-------iG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~ 109 (599)
T PF06609_consen 38 RSPRFIASFAAFSLAVIAAYFVLVLPASILPYINAD-------IGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRY 109 (599)
T ss_pred eCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHh-------cCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchH
Confidence 334444443334444444445555556667766665 5554 56689999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 018453 126 ELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSL 205 (355)
Q Consensus 126 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 205 (355)
+++.+.++..+|+++++.++|...++++..+.|+|.|.... ....++|..|.|.|+.+.++......+....++.++..
T Consensus 110 ~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~ 188 (599)
T PF06609_consen 110 FFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQL 188 (599)
T ss_pred HHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHH
Confidence 99999999999999999999999999999999999876654 46668999999999988888877777777778888877
Q ss_pred hhccccchhHHHHhHHHHHHHHHHHHhhcccchhH
Q 018453 206 LVDLVAGWRYMYGASTPLAVIMGMGMWWLPASPRW 240 (355)
Q Consensus 206 l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~esp~~ 240 (355)
+.... +|||.|++.++...+.++..+++...|++
T Consensus 189 ~~~~~-~WRw~~~~~~i~~~i~~vl~~~fY~PP~~ 222 (599)
T PF06609_consen 189 FAAHS-GWRWIFYIFIIWSGIALVLIFFFYFPPPR 222 (599)
T ss_pred hccCC-CcchHHHHHHHHHHHHHHHHHHHhCCCch
Confidence 76554 99999999988877766554444333443
No 77
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.76 E-value=2.1e-16 Score=140.52 Aligned_cols=228 Identities=21% Similarity=0.270 Sum_probs=184.4
Q ss_pred HHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Q 018453 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (355)
Q Consensus 55 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~ 134 (355)
+.+....++.|+......+.+|++.+. ++++..+.+++...++.|+.+++++.|++.+|+|+|+.+++++.+.
T Consensus 16 v~~t~lFfl~G~~~~l~diLip~l~~~-------f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~ 88 (422)
T COG0738 16 VLLTSLFFLWGFITCLNDILIPHLKEV-------FDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLY 88 (422)
T ss_pred HHHHHHHHHHHHHhhcchhhHHHHHHH-------hCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHH
Confidence 444555677888888999999999886 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH---hhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc--
Q 018453 135 LVGALVTA---LAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL-- 209 (355)
Q Consensus 135 ~~~~~~~~---~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~-- 209 (355)
++++.+.. ...++..++++-++.|.|.|...+..+.++....+++.-...+++.+.++++|..++|++++.++..
T Consensus 89 avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~ 168 (422)
T COG0738 89 AVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGV 168 (422)
T ss_pred HHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Confidence 99999884 4567899999999999999999999999999999999899999999999999999999999998862
Q ss_pred ----------------ccchhHHHHhHHHHHHHHHHHHhhc--ccchhHHHHhhccccCchhhhHHHHHHHHHHHhCCCC
Q 018453 210 ----------------VAGWRYMYGASTPLAVIMGMGMWWL--PASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSI 271 (355)
Q Consensus 210 ----------------~~~w~~~~~~~~~~~~~~~~~~~~~--~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (355)
...|+..|.+.+...++..+..... |+.+. ++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~-----------------~~------------- 218 (422)
T COG0738 169 ALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQV-----------------AA------------- 218 (422)
T ss_pred hhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCc-----------------cc-------------
Confidence 1247777777666665555444332 22110 00
Q ss_pred CCCchhHHHHHHHhhccccccccchhhhhhcccchhHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHh
Q 018453 272 GDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQDF 338 (355)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (355)
++..+.+.....+++++|.++.-.++.+++...+.. +..|++.++.+.
T Consensus 219 ---------------~~~~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva----~gsfl~~y~~~~ 266 (422)
T COG0738 219 ---------------PSLGASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVA----IGSFLVSYLEEL 266 (422)
T ss_pred ---------------ccccccccchHHHHHhChHHHHHHHHHHHHHhHHHH----HHHHHHHHHHhc
Confidence 000111122678899999999999999999888654 667888888774
No 78
>PTZ00207 hypothetical protein; Provisional
Probab=99.75 E-value=2.1e-16 Score=151.25 Aligned_cols=144 Identities=19% Similarity=0.200 Sum_probs=119.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh------hhHHHHHHHHHHHHHHHh
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA------PDFIIMVVGRFVFGIGIG 162 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~r~l~G~~~g 162 (355)
+|++..+.+++.++. .....++++.|++.||+|+|++++++.++..++.++.+++ ++++.+.+.|++.|+|.+
T Consensus 57 lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~ 135 (591)
T PTZ00207 57 YNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCM 135 (591)
T ss_pred hCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHH
Confidence 899999999998773 4455678889999999999999999999999999999987 689999999999999999
Q ss_pred hHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHH-Hhhccc
Q 018453 163 LAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMG-MWWLPA 236 (355)
Q Consensus 163 ~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~e 236 (355)
...+.....+.+++| ++||+++|+...+.++|+++.+.+...+.. . +|+..|++.+++.++..++ ++++++
T Consensus 136 ~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~-~~~~~fl~l~vl~~vv~ll~~~~vr~ 207 (591)
T PTZ00207 136 LFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-D-NTSAYFFFLMSFALVVGILAIVFMRL 207 (591)
T ss_pred HHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-hHHHHHHHHHHHHHHHHHHHHhheeC
Confidence 998999999999997 789999999999999999865554444443 2 6888888887776665443 344433
No 79
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.73 E-value=6.1e-16 Score=143.49 Aligned_cols=163 Identities=17% Similarity=0.093 Sum_probs=124.5
Q ss_pred HHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH----HHHHHHHHHHHHH
Q 018453 62 LLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRR----RELILAALLYLVG 137 (355)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr----~~~~~~~~l~~~~ 137 (355)
+.+....+...+.+|.+.++ +|.|..+.|++.+++.++..+++++.|.+.||+||| +.+.+...+ ..
T Consensus 14 ~~~~~~~g~~~p~l~~~l~~-------~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~--~~ 84 (382)
T PRK11128 14 FGYFFAYGVFLPFWSVWLKG-------QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLL--FA 84 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHh-------cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHH--HH
Confidence 44444556677777877775 799999999999999999999999999999999984 222222211 12
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHH
Q 018453 138 ALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMY 217 (355)
Q Consensus 138 ~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~ 217 (355)
.......++++.+++.|++.|++.+...+....+..++ .++|++..+....+..+|.++||++++.+.+.. |||..|
T Consensus 85 ~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~-g~~~~f 161 (382)
T PRK11128 85 VAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWF-GEQAIL 161 (382)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHc-ChhHHH
Confidence 22333457899999999999999888888877777776 356888888899999999999999999999887 999999
Q ss_pred HhHHHHHHHHHHHHhhccc
Q 018453 218 GASTPLAVIMGMGMWWLPA 236 (355)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~e 236 (355)
++.++..++..+..++.||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~ 180 (382)
T PRK11128 162 WILTAGVASMLLGQLLRPT 180 (382)
T ss_pred HHHHHHHHHHHHHHHccCC
Confidence 8877655444443333443
No 80
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.72 E-value=1.1e-16 Score=151.70 Aligned_cols=163 Identities=18% Similarity=0.123 Sum_probs=140.3
Q ss_pred HHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Q 018453 62 LLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVT 141 (355)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~ 141 (355)
+.+|... ..+...+.+.++ ++.+..+.+|+.++......+..++.+.+.||+|.|.+.++|.++..++.++.
T Consensus 57 ~~~g~~~-~~Gv~~~~~~~~-------f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~ls 128 (509)
T KOG2504|consen 57 STDGLIN-SFGLLFEELMDY-------FGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLS 128 (509)
T ss_pred hhhcchh-eehhhHHHHHHH-------hCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHH
Confidence 3334333 344556666665 78888899999999999999999999999999999999999999999999999
Q ss_pred HhhhhHHHHHHH-HHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhH
Q 018453 142 ALAPDFIIMVVG-RFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGAS 220 (355)
Q Consensus 142 ~~~~~~~~~~~~-r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~ 220 (355)
.+++++|.+++. -++.|+|.|..+......+..++. ++|+.+.|+...+.++|.++-|.+...+.+.. |||+.+++.
T Consensus 129 sF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~-G~r~~~l~~ 206 (509)
T KOG2504|consen 129 SFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKY-GWRGALLIF 206 (509)
T ss_pred HHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHh-CcHHHHHHH
Confidence 999999877764 488999999999999999998875 77999999999999999999999999999998 999999998
Q ss_pred HHHHHHHHHHHhhc
Q 018453 221 TPLAVIMGMGMWWL 234 (355)
Q Consensus 221 ~~~~~~~~~~~~~~ 234 (355)
+.+.+-.++..+..
T Consensus 207 ~~~~l~~~~~~~~~ 220 (509)
T KOG2504|consen 207 GGISLNVLVAGALL 220 (509)
T ss_pred HHHHHHHHHHHHHc
Confidence 88877665554443
No 81
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.72 E-value=9.5e-16 Score=142.19 Aligned_cols=156 Identities=12% Similarity=-0.003 Sum_probs=123.3
Q ss_pred HHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH-HHHHH
Q 018453 59 LGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAAL-LYLVG 137 (355)
Q Consensus 59 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~-l~~~~ 137 (355)
+..+.+....+...+.+|.+.++ +|.|..+.|++.+++.+...+++++.|.++||+||+........ ...+.
T Consensus 11 ~~~~~~~~~~~~~~p~l~~~l~~-------~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~ 83 (382)
T TIGR00902 11 LGFFGYFCAYGIFLPFFPAWLKG-------IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIF 83 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 34455555556677788888876 89999999999999999999999999999999998544322211 11122
Q ss_pred H-HHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHH
Q 018453 138 A-LVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYM 216 (355)
Q Consensus 138 ~-~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~ 216 (355)
. .....+++++.+++.|++.|.+.+...+....+..++ .++|++.++....+.++|.+++|++++.+.+.. |||..
T Consensus 84 ~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~-g~~~~ 160 (382)
T TIGR00902 84 AAAFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMF-DEQNI 160 (382)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHc-ChhHH
Confidence 2 2334568899999999999998888888888887665 467899999999999999999999999999887 99999
Q ss_pred HHhHHHHH
Q 018453 217 YGASTPLA 224 (355)
Q Consensus 217 ~~~~~~~~ 224 (355)
|++..+..
T Consensus 161 f~~~~~~~ 168 (382)
T TIGR00902 161 LAILTAGL 168 (382)
T ss_pred HHHHHHHH
Confidence 98766553
No 82
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.72 E-value=6.2e-16 Score=162.75 Aligned_cols=148 Identities=18% Similarity=0.141 Sum_probs=120.1
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH---hhhhHHHHHHHHHHHHHHHhhHHhHH
Q 018453 92 SSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA---LAPDFIIMVVGRFVFGIGIGLAMHAA 168 (355)
Q Consensus 92 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (355)
+....+++.+++.++++++++++|+++||+|||++++++.++.++..++.. ..++++.++++|++.|++.+...+..
T Consensus 45 ~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 124 (1146)
T PRK08633 45 QVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAK 124 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHH
Confidence 455679999999999999999999999999999999988877665555443 34678999999999999999999999
Q ss_pred HHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc--------ccchhHHHHhHHHHH-HHHHHHHhhcccchh
Q 018453 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL--------VAGWRYMYGASTPLA-VIMGMGMWWLPASPR 239 (355)
Q Consensus 169 ~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~--------~~~w~~~~~~~~~~~-~~~~~~~~~~~esp~ 239 (355)
..++.|++|+++|++++++...+..+|.++|+++++++... ..+|.+.+.+.++.. ++.+++.+.+|++|+
T Consensus 125 ~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (1146)
T PRK08633 125 YGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPA 204 (1146)
T ss_pred HhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCC
Confidence 99999999999999999999999999999999999998865 324555444443333 334444455677654
No 83
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.72 E-value=2e-16 Score=139.04 Aligned_cols=148 Identities=24% Similarity=0.257 Sum_probs=122.4
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHH
Q 018453 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAP 169 (355)
Q Consensus 90 ~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~ 169 (355)
+.+....|++.+.++++..+.++.+|.++||+|||.+++++.+..++..++.+++.|+..++++|++.|+..| ...+.-
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg-nl~v~r 142 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG-NLSVIR 142 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-chHHHH
Confidence 5567788999999999999999999999999999999999999999999999999999777788999999888 556668
Q ss_pred HHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhc---cccchhHHH--HhHHHHHHH-HHHHHhhcccch
Q 018453 170 MYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD---LVAGWRYMY--GASTPLAVI-MGMGMWWLPASP 238 (355)
Q Consensus 170 ~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~---~~~~w~~~~--~~~~~~~~~-~~~~~~~~~esp 238 (355)
++++|.+++|+|+.+++.+.+.+++|-++||++++++.. ..+.+...+ ++..+.+.. .....+++||+-
T Consensus 143 AiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL 217 (451)
T KOG2615|consen 143 AIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETL 217 (451)
T ss_pred HHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 899999999999999999999999999999999999987 222222222 122222222 233456689983
No 84
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.71 E-value=2.3e-15 Score=143.85 Aligned_cols=169 Identities=20% Similarity=0.195 Sum_probs=136.8
Q ss_pred HHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccHHH-HHHHHHHH
Q 018453 61 GLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADIL-----GRRRE-LILAALLY 134 (355)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----Grr~~-~~~~~~l~ 134 (355)
++..|......+..+|...++ .|.+..+.+.+ +.....+ ++++++|.++||+ |||+. ++++.++.
T Consensus 21 ~~~~gl~~~~~~~~l~~~l~~-------~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~ 91 (491)
T PRK11010 21 GFASGLPLALTSGTLQAWMTV-------ENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLL 91 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-------CCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHH
Confidence 345555666677778877775 68898899887 3333443 6899999999999 99885 55777777
Q ss_pred HHHHHHHHhh---hhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 018453 135 LVGALVTALA---PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVA 211 (355)
Q Consensus 135 ~~~~~~~~~~---~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~ 211 (355)
+++..+.++. ++++.+.+.+++.|++.+...+....+..|++|+++|+++.++...+..+|.++++.++..+.+...
T Consensus 92 ~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~ 171 (491)
T PRK11010 92 LVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYL 171 (491)
T ss_pred HHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 7777776664 4678888899999999999999999999999999999999999999999999999999999988433
Q ss_pred chhHHHHhHHHHHHHHHHHHhhcccch
Q 018453 212 GWRYMYGASTPLAVIMGMGMWWLPASP 238 (355)
Q Consensus 212 ~w~~~~~~~~~~~~~~~~~~~~~~esp 238 (355)
|||..|++.+++.++..+..+++||++
T Consensus 172 GWr~~f~i~a~l~ll~~l~~~~~~e~~ 198 (491)
T PRK11010 172 GWQGMYWLMAALLIPCIIATLLAPEPT 198 (491)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 999999998888777666656677754
No 85
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.71 E-value=8.7e-16 Score=161.41 Aligned_cols=145 Identities=15% Similarity=0.060 Sum_probs=118.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH---HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHH
Q 018453 93 SVEIGLITSGSLYGALIGSILAFNIADILGRRRELIL---AALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAP 169 (355)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~ 169 (355)
....++..+++.+.++++++++|+++||+|||+++.. ..++..+..++....++++.++++|+++|++.+...+...
T Consensus 51 ~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~ 130 (1140)
T PRK06814 51 NALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKY 130 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHH
Confidence 3557888999999999999999999999999997533 2222222223333347899999999999999999999999
Q ss_pred HHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhcccch
Q 018453 170 MYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASP 238 (355)
Q Consensus 170 ~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~esp 238 (355)
+++.+++|+++|++++++.+++..+|.++||++++++.... +|++.|++.+++.++.+++.+++|+++
T Consensus 131 a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (1140)
T PRK06814 131 SILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISG-NFVILVALLMGIAVLGWLASLFIPKTG 198 (1140)
T ss_pred HhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhcc-ccHHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 99999999999999999999999999999999999999876 999999655555555555666666653
No 86
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.71 E-value=1e-15 Score=140.48 Aligned_cols=158 Identities=15% Similarity=0.085 Sum_probs=126.0
Q ss_pred ccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccHHHH-HHHHHHHHHHHHHHHh
Q 018453 70 STSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADIL-----GRRREL-ILAALLYLVGALVTAL 143 (355)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----Grr~~~-~~~~~l~~~~~~~~~~ 143 (355)
..++.+|.+.++ .|+|.++.+++... .+...+ .+++|.+.||+ |||+.+ +.+.++.++.....++
T Consensus 6 ~~~~~~~~~~~~-------~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~ 76 (356)
T TIGR00901 6 LVGNTLPYWLRS-------KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSF 76 (356)
T ss_pred hHHhHHHHHHHH-------cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHc
Confidence 345556666665 79999999999755 444444 89999999998 898874 5677777777666666
Q ss_pred h---hhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccc--------
Q 018453 144 A---PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAG-------- 212 (355)
Q Consensus 144 ~---~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~-------- 212 (355)
. .+.+.+....++.+++.+...+....++.|++|+++|+++.++...+..+|.++++.+++.+.... +
T Consensus 77 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~-g~~~~~~~~ 155 (356)
T TIGR00901 77 LVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPE-FANTGLITL 155 (356)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhc-ccccccccc
Confidence 6 456667777788888888888999999999999999999999999999999999999999888766 5
Q ss_pred hhHHHHhHHHHHHHHHHHHhh-cccc
Q 018453 213 WRYMYGASTPLAVIMGMGMWW-LPAS 237 (355)
Q Consensus 213 w~~~~~~~~~~~~~~~~~~~~-~~es 237 (355)
||..|++.+++.++..+..++ .||+
T Consensus 156 wr~~f~i~ai~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 156 WGYIFFWTALLILPGLLVTLFLAKEP 181 (356)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 999999988877776555444 4553
No 87
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.70 E-value=2.5e-15 Score=140.32 Aligned_cols=169 Identities=20% Similarity=0.179 Sum_probs=139.8
Q ss_pred HHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccHH-HHHHHHHHH
Q 018453 61 GLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADIL-----GRRR-ELILAALLY 134 (355)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----Grr~-~~~~~~~l~ 134 (355)
++..|+..+.....+|.+.++ .|++.++.|++..+... .+.++++|+++||+ |||| .++++.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~-------~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~ 78 (402)
T PRK11902 8 GFASGLPLALTSGTLQAWMTV-------EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGL 78 (402)
T ss_pred HHHHhhhHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHH
Confidence 455666677777888888886 69999999999777665 69999999999999 7875 677778888
Q ss_pred HHHHHHHHhh---hhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 018453 135 LVGALVTALA---PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVA 211 (355)
Q Consensus 135 ~~~~~~~~~~---~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~ 211 (355)
+++..+.++. .+++.+++..++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+.+...
T Consensus 79 ~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~ 158 (402)
T PRK11902 79 AASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVL 158 (402)
T ss_pred HHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhccc
Confidence 7777777775 3577778888888888888899999999999999999999999999999999999999998887544
Q ss_pred chhHHHHhHHHHHHHHHHHHhhcccch
Q 018453 212 GWRYMYGASTPLAVIMGMGMWWLPASP 238 (355)
Q Consensus 212 ~w~~~~~~~~~~~~~~~~~~~~~~esp 238 (355)
|||..|++.+++.++..+..++.||++
T Consensus 159 gw~~~f~i~a~~~l~~~l~~~~~~e~~ 185 (402)
T PRK11902 159 GWGNTYLLMAGLMLAGALTTLWAPEPE 185 (402)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 899999998887766655555666653
No 88
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.70 E-value=7.9e-16 Score=146.63 Aligned_cols=146 Identities=14% Similarity=0.148 Sum_probs=126.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHHHHHHHHHHhhHHh
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI-LGRRRELILAALLYLVGALVTALAPDFI-IMVVGRFVFGIGIGLAMH 166 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~r~l~G~~~g~~~~ 166 (355)
+|++..+.+++.+.+.....+..+++|+++|| +|||+.++++.++..++.++++++.+.. .++++|+++|+|.|...+
T Consensus 45 lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~ 124 (489)
T PRK10207 45 LGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKA 124 (489)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccC
Confidence 79999999999999998888889999999999 9999999999999999999998876644 455899999999999999
Q ss_pred HHHHHHHhhcCCC--chhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhcc
Q 018453 167 AAPMYIAETAPTP--MRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLP 235 (355)
Q Consensus 167 ~~~~~~~e~~~~~--~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 235 (355)
....++.|.+|++ +|+.++++++.+.++|.++||.+++++.+.. |||+.|++.++..++.++.+++.+
T Consensus 125 ~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~-gw~~~F~i~~i~~~~~~~~~~~~~ 194 (489)
T PRK10207 125 NPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKF-GYSVTYNLCGAGLIIALLVYFACR 194 (489)
T ss_pred CHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhh-ChHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999887 4578999999999999999999999999887 899999987654444444444443
No 89
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.69 E-value=1.6e-16 Score=140.56 Aligned_cols=145 Identities=19% Similarity=0.314 Sum_probs=137.5
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (355)
.+-+.++.|++.+...+..++.+++.|.+.||+|+|..+++|++++..++++.++..++++++++|.++|+|.+...+..
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsg 180 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSG 180 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhh
Confidence 56678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCc-hhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhc
Q 018453 169 PMYIAETAPTPM-RGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWL 234 (355)
Q Consensus 169 ~~~~~e~~~~~~-r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 234 (355)
..++++.+|.+. |++++|....+.++|..+||++++.+.+.. |.+..|++.++++++...+.+++
T Consensus 181 lamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~-Gk~aPFlVL~~v~Lld~~L~l~v 246 (464)
T KOG3764|consen 181 LAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA-GKSAPFLVLAIVLLLDGALQLLV 246 (464)
T ss_pred HHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc-CCcCcHHHHHHHHHHHHHHHHhe
Confidence 999999999866 799999999999999999999999999987 99999999999999977776664
No 90
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.69 E-value=1.6e-15 Score=144.29 Aligned_cols=145 Identities=12% Similarity=0.122 Sum_probs=131.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI-LGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 167 (355)
+|++..+.+++.+.+.++..++++++|+++|| +|||+.++++.++.+++.++.+++++.+.++++|++.|++.|...+.
T Consensus 43 lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~ 122 (475)
T TIGR00924 43 LGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKAN 122 (475)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCC
Confidence 68999999999999999999999999999999 89999999999999999999998888888889999999999999999
Q ss_pred HHHHHHhhcCCCc---hhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhc
Q 018453 168 APMYIAETAPTPM---RGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWL 234 (355)
Q Consensus 168 ~~~~~~e~~~~~~---r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 234 (355)
...++++++|+++ |+.+.++++.+.++|.++||++++.+.+.. ||++.|++.++..+++.+.+++.
T Consensus 123 ~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~-g~~~~f~~~~~~~~~~~l~~~~~ 191 (475)
T TIGR00924 123 PSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENY-GYHVGFNLAAVGMVIGLLTFFAG 191 (475)
T ss_pred HHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999998764 888999999999999999999999998877 89999999886665555444443
No 91
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.69 E-value=1e-14 Score=128.05 Aligned_cols=232 Identities=23% Similarity=0.166 Sum_probs=187.1
Q ss_pred HHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Q 018453 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY 134 (355)
Q Consensus 55 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~ 134 (355)
....+..+..--..+..++.++.+.++ +|+|.+..|+++++..+...+.+++..++..|+|.++.+..++++.
T Consensus 15 ~gIvlia~NLR~~itsvgPLL~~Ir~~-------~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli 87 (395)
T COG2807 15 AGIVLIAFNLRPAITSVGPLLDEIRQD-------LGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLI 87 (395)
T ss_pred HHHHHHHhccchhhhhhhhhHHHHHHH-------hcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHH
Confidence 333344444455677788999999887 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchh
Q 018453 135 LVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWR 214 (355)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~ 214 (355)
.++.++-... +...++.+-.+.|.|.+...+..+..+.+.+|+ +-+..++++.+..++|+.+++.++..+.++..+||
T Consensus 88 ~~G~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk-~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~ 165 (395)
T COG2807 88 AAGILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPK-RVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWR 165 (395)
T ss_pred HHHHHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhccc-chhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHH
Confidence 9999999886 788899999999999999999999999999985 57999999999999999999999999888776899
Q ss_pred HHHHhHHHHHHHHHHHHhhcccchhHHHHhhccccCchhhhHHHHHHHHHHHhCCCCCCCchhHHHHHHHhhcccccccc
Q 018453 215 YMYGASTPLAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKE 294 (355)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (355)
..+.+-+.++++++++|+. ...|.. . ...+.+.
T Consensus 166 ~aL~~WAl~allAl~~WlP--q~~r~~---~------------------------------------------~~~~~~~ 198 (395)
T COG2807 166 GALGFWALLALLALLIWLP--QALREQ---A------------------------------------------ASIATKL 198 (395)
T ss_pred HHHHHHHHHHHHHHHHHhh--hccccc---c------------------------------------------ccccccc
Confidence 9999999998888876543 211100 0 0012233
Q ss_pred chhhhhhcccchhHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHhccccchhh
Q 018453 295 VSLREVFHGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQDFLQPLMQHG 346 (355)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (355)
.+...+|++|.-|.. .+++..|....|....|+|.|+.+.+-+-+..+
T Consensus 199 ~~~~~vw~~~~aW~v----tLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG 246 (395)
T COG2807 199 VSVRKVWRSPLAWQV----TLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAG 246 (395)
T ss_pred ccccccccCchhHHH----HHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhh
Confidence 444567887654444 445666666789999999999999987754443
No 92
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.68 E-value=2.1e-14 Score=133.77 Aligned_cols=148 Identities=20% Similarity=0.210 Sum_probs=112.7
Q ss_pred ccCChhHHHHHHHHHHH-HHHHHHHHHHHHHHHhccHHHHH-HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHh
Q 018453 89 YDLSSVEIGLITSGSLY-GALIGSILAFNIADILGRRRELI-LAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMH 166 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~Grr~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~ 166 (355)
+|++.++.|++.+...+ +++++.+++++ .||+|||+.++ .+.++..++..+.+++++++.+++.+.+.|...+...+
T Consensus 46 ~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 124 (393)
T PRK15011 46 VHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANP 124 (393)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHH
Confidence 89999999999776544 66666666666 99999998754 55566667777778888888877666555555556677
Q ss_pred HHHHHHHhhcCCCch--hHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHH-Hhhcccch
Q 018453 167 AAPMYIAETAPTPMR--GQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMG-MWWLPASP 238 (355)
Q Consensus 167 ~~~~~~~e~~~~~~r--~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~esp 238 (355)
....+..++.+++.| +...++.+.+.++|.++||++++.+.+.. |||..|++.++.+++..+. ++++||.+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 125 QMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGF-SFTVMYLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHhhcCccC
Confidence 778888888776655 34557889999999999999999998877 9999999988877665444 44567654
No 93
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.67 E-value=1.4e-14 Score=135.12 Aligned_cols=157 Identities=15% Similarity=0.095 Sum_probs=115.9
Q ss_pred hcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH---Hhh
Q 018453 68 IGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVT---ALA 144 (355)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~---~~~ 144 (355)
.....+.++.+..+ ++|++..+.+++.++..++..+++++.|+++||+|||+.++.+.+...+..... .+.
T Consensus 18 ~~~~~~~~~~~~~~------~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~ 91 (396)
T TIGR00882 18 MSAYFPFFPIWLHD------VNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFG 91 (396)
T ss_pred HHHHHHHHHHHHHH------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33445555555442 179999999999999999999999999999999999999987766655443322 111
Q ss_pred -----hhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHh
Q 018453 145 -----PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGA 219 (355)
Q Consensus 145 -----~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~ 219 (355)
.....+++.+++.|++.+...+....+..+..+ +++...+......++|.+++|++++.+.+ . +|+..|++
T Consensus 92 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~-~~~~~f~~ 167 (396)
T TIGR00882 92 PLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFS-I-DPQIVFWL 167 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhc-c-CchHHHHH
Confidence 123345667888888888778887777777543 34556677888889999999999887765 3 89999999
Q ss_pred HHHHHHHHHHHHhhc
Q 018453 220 STPLAVIMGMGMWWL 234 (355)
Q Consensus 220 ~~~~~~~~~~~~~~~ 234 (355)
.+++.++..+..++.
T Consensus 168 ~~~~~~~~~~~~~~~ 182 (396)
T TIGR00882 168 GSGFALILMLLLMFA 182 (396)
T ss_pred HHHHHHHHHHHHHHh
Confidence 888877765544443
No 94
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.66 E-value=2.4e-15 Score=118.25 Aligned_cols=136 Identities=27% Similarity=0.455 Sum_probs=120.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCC
Q 018453 100 TSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTP 179 (355)
Q Consensus 100 ~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~ 179 (355)
.+.+.++..++.++.|++.||+|||+.+..+..+..++.++..+.++++.+.+.+++.|++.+...+....++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 34567888999999999999999999999999999999888888889999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhh-ccc
Q 018453 180 MRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW-LPA 236 (355)
Q Consensus 180 ~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~e 236 (355)
+|++.+++.+....+|..+++.+.+.+.+.. +|++.+++.+++.++..+..++ .||
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQFL-GWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhccc-chHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999999998776 8999999888877766554443 444
No 95
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.62 E-value=2e-14 Score=137.70 Aligned_cols=141 Identities=16% Similarity=0.135 Sum_probs=119.8
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHhhHHh
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI-LGRRRELILAALLYLVGALVTALAP-DFIIMVVGRFVFGIGIGLAMH 166 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~r~l~G~~~g~~~~ 166 (355)
+|++..+.+++.+.+........+++|+++|| +|||+.++++.++..++.+++++++ +.+.++++|++.|++.|...+
T Consensus 52 lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~ 131 (500)
T PRK09584 52 LGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKA 131 (500)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccC
Confidence 79999998888888776666667889999999 5999999999999999988888864 456677889999999998888
Q ss_pred HHHHHHHhhcCCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHH
Q 018453 167 AAPMYIAETAPTPM--RGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMG 230 (355)
Q Consensus 167 ~~~~~~~e~~~~~~--r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~ 230 (355)
....++.|++|+++ |..++++++.+.++|.++||.+++++.+.. |||+.|++.++..+++++.
T Consensus 132 ~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~-g~~~~F~i~~i~~~i~~i~ 196 (500)
T PRK09584 132 NPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKY-GWSVAFALSVVGMLITVVN 196 (500)
T ss_pred CHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHH
Confidence 88899999998654 456788899999999999999999999887 8999999887655554443
No 96
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.61 E-value=7.5e-14 Score=131.16 Aligned_cols=143 Identities=22% Similarity=0.180 Sum_probs=99.8
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH---hhh-----hHHHHHHHHHHHHHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA---LAP-----DFIIMVVGRFVFGIG 160 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~---~~~-----~~~~~~~~r~l~G~~ 160 (355)
+|++..+.|++.+++.++..+++++.|+++||+|||+.++++..+.++...... ..+ .....++++++.|.+
T Consensus 41 ~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (420)
T PRK09528 41 NGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFG 120 (420)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 799999999999999999999999999999999999998876665554432211 111 111122233334433
Q ss_pred HhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhcc
Q 018453 161 IGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLP 235 (355)
Q Consensus 161 ~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 235 (355)
.....+....+..+. .++++..++.......+|..++|++++.+.+. +|++.|++.++++++.+++.++++
T Consensus 121 ~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~--~~~~~f~~~~~~~~~~~~~~~~~~ 191 (420)
T PRK09528 121 FLAGAGAIEAYIERV--SRRSGFEYGRARMWGSLGWALCAFIAGILFNI--NPQINFWLGSGSALILLVLLFFAK 191 (420)
T ss_pred hccchhhhhhHHHHH--HhhccccchhhHHhhhHHHHHHHHHHHHHHhc--CchHhHHHHHHHHHHHHHHHhccc
Confidence 333333333443322 24567788888999999999999999988763 799999988888777665555543
No 97
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.61 E-value=3.5e-14 Score=140.01 Aligned_cols=141 Identities=18% Similarity=0.096 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhh
Q 018453 96 IGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAET 175 (355)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~ 175 (355)
..+...+..++.+++.++.|+++||+|||++++++.++.++++++.++.++...+++++++.|++.++..+....+++|+
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl 676 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVEL 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556677899999999999999999999999999999999999988888888888888999998888899999999999
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhcccch
Q 018453 176 APTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASP 238 (355)
Q Consensus 176 ~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~esp 238 (355)
+|++.|++++|+......+|.+++|++++.+... +...+|++.+++.+++.++.+++||+.
T Consensus 677 ~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~--~~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 677 YPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI--TKAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 9999999999999999999999999999988764 456788888877777777677788864
No 98
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.60 E-value=2.1e-13 Score=126.96 Aligned_cols=146 Identities=13% Similarity=0.108 Sum_probs=123.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (355)
+|++..+.+++.+...++.+++.++.|+++||+|||+.+..+.+...+........++.+.+++.+++.+++.|...+..
T Consensus 247 ~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~ 326 (393)
T PRK15011 247 LHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIG 326 (393)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 68899999998888888888999999999999999998887766666555555556777778888998888888777777
Q ss_pred HHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhccc
Q 018453 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPA 236 (355)
Q Consensus 169 ~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e 236 (355)
..+..|.+|+ +|++++++++....+|..+++.+++.+.+.. +|+..|++.++++++.++..++.||
T Consensus 327 ~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 327 MLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIW-NYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 8888999985 5999999999999999999999999999877 8999999888888887777776664
No 99
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.59 E-value=1.1e-13 Score=130.55 Aligned_cols=144 Identities=16% Similarity=0.088 Sum_probs=118.7
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHhhHHh
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADIL-GRRRELILAALLYLVGALVTALAP-DFIIMVVGRFVFGIGIGLAMH 166 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~r~l~G~~~g~~~~ 166 (355)
+|++..+.+.+.+.+.....++.+++|+++||+ |||+.++++.++..++.++.+... +...+.++..+.++|.|...+
T Consensus 40 lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~ 119 (493)
T PRK15462 40 LKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKS 119 (493)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccc
Confidence 689999999999999999999999999999999 999999999999999887666533 223344445555666677777
Q ss_pred HHHHHHHhhcCCC--chhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhh
Q 018453 167 AAPMYIAETAPTP--MRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (355)
Q Consensus 167 ~~~~~~~e~~~~~--~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~ 233 (355)
...+++.|.+|++ +|..+.++.+.+.++|+.++|.+.+++.+.. ||++.|.++++..+++++..++
T Consensus 120 ~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~-Gw~~~F~iaaigm~l~li~~~~ 187 (493)
T PRK15462 120 NVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY-SWAMGFGLAAVGMIAGLVIFLC 187 (493)
T ss_pred cHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh-ChHHHHHHHHHHHHHHHHHHHH
Confidence 7788999999876 6999999999999999999999999998877 9999999877655554444433
No 100
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.58 E-value=3.3e-14 Score=133.56 Aligned_cols=147 Identities=14% Similarity=0.177 Sum_probs=126.7
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHH
Q 018453 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAP 169 (355)
Q Consensus 90 ~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~ 169 (355)
+.+..+.|++.++..++..++.++.|++.||+|+|+.+..+.++.+++.++.++.++.+.+++.+++.|++.+...+...
T Consensus 258 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 337 (420)
T PRK09528 258 EQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVF 337 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677889999999999999999999999999999999999999999888888888988888999999999888888888
Q ss_pred HHHHhhcCCCchhHHHHH-HHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHH-hhcccc
Q 018453 170 MYIAETAPTPMRGQLISL-KEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGM-WWLPAS 237 (355)
Q Consensus 170 ~~~~e~~~~~~r~~~~~~-~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~es 237 (355)
.++.|.+|++.|++..+. ++....+|.++++.+.+++.+.. ||+..|.+.+++.++..++. ++.++.
T Consensus 338 ~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~-G~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 338 KYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI-GFQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh-CchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 899999999999887665 67788999999999999999987 89999998887776654443 344443
No 101
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.58 E-value=7.3e-14 Score=130.55 Aligned_cols=146 Identities=24% Similarity=0.237 Sum_probs=124.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (355)
.|.+..+.+++.+...++.+++.++.|+++||+|||+.+.++.+...++.++..+.++.+.+.+..++.|++.++..+..
T Consensus 250 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 329 (406)
T PRK11551 250 QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVL 329 (406)
T ss_pred CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHH
Confidence 68889999999999999999999999999999999999888777777777666667777777778888999888888888
Q ss_pred HHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhc
Q 018453 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWL 234 (355)
Q Consensus 169 ~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 234 (355)
..++.|.+|+++|++.+++.+....+|.+++|.+.+.+.+..++|...+++.+...+++.+..+++
T Consensus 330 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 330 YALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998876567777777666666655554444
No 102
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.56 E-value=8.9e-14 Score=128.04 Aligned_cols=139 Identities=14% Similarity=0.084 Sum_probs=121.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhH--HHHHHHHHHHHHHHhhHHh
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDF--IIMVVGRFVFGIGIGLAMH 166 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~r~l~G~~~g~~~~ 166 (355)
++.+..+.+++.+...++..++.++.|++.||+|||+.+.++.++..++.++..+.++. ..++...++.|++.+...+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 314 (377)
T TIGR00890 235 LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTIS 314 (377)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchh
Confidence 68888889999999999999999999999999999999999888888888777666532 3344567888888888888
Q ss_pred HHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHH
Q 018453 167 AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMG 228 (355)
Q Consensus 167 ~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~ 228 (355)
..+.++.|.+|+++|++..++.+....+|..++|.+.+.+.+.. ||++.|++.+++++++.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 315 LFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEI-GFEYTFIVTGAFALTSL 375 (377)
T ss_pred ccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh-chhhHHHHHHHHHHHhc
Confidence 88889999999999999999999999999999999999998887 89999998887766643
No 103
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.56 E-value=4.1e-13 Score=125.26 Aligned_cols=141 Identities=21% Similarity=0.239 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHh
Q 018453 95 EIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAE 174 (355)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e 174 (355)
..++..+.+.++.+++.++.|++.||+|+|+.+..+.++.+++.++..+.++.+.+++.+++.|++.+...+.....+.|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~ 329 (399)
T PRK05122 250 GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVK 329 (399)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34566778888999999999999999999999998888888888887777888888888999999999888888888889
Q ss_pred hcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhccc
Q 018453 175 TAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPA 236 (355)
Q Consensus 175 ~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e 236 (355)
..|+++||++.++++....+|..+++.+.+.+.+.. ||++.|++.+++++++++..+++++
T Consensus 330 ~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 330 RVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWF-GYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999998877 8999999988887777666555544
No 104
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.55 E-value=2.9e-13 Score=123.25 Aligned_cols=160 Identities=29% Similarity=0.376 Sum_probs=141.1
Q ss_pred hcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHhhhh
Q 018453 68 IGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRR-ELILAALLYLVGALVTALAPD 146 (355)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~-~~~~~~~l~~~~~~~~~~~~~ 146 (355)
........+.+..+ .+|.+..+.+++.+...++..++.++.+++.||+|||+ .+..+..+..++.++....++
T Consensus 191 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 264 (352)
T cd06174 191 YYGLLTYLPLYLQE------VLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPS 264 (352)
T ss_pred HHHHHHHHHHHHHH------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 33344445555443 14889999999999999999999999999999999999 999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHH
Q 018453 147 FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (355)
Q Consensus 147 ~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~ 226 (355)
.+.+.+..++.|++.+...+....++.|..|+++|++.+++.+....+|..+++.+.+.+.+.. +|+..+++.+++.++
T Consensus 265 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~-~~~~~~~~~~~~~~i 343 (352)
T cd06174 265 LALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG-GYGGVFLILAALALL 343 (352)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcchHHHHHHHHHHH
Confidence 8889999999999999999999999999999999999999999999999999999999999876 999999999998888
Q ss_pred HHHHHhhc
Q 018453 227 MGMGMWWL 234 (355)
Q Consensus 227 ~~~~~~~~ 234 (355)
..+..+++
T Consensus 344 ~~i~~~~~ 351 (352)
T cd06174 344 AALLLLLL 351 (352)
T ss_pred HHHHheec
Confidence 77665443
No 105
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.54 E-value=2.8e-13 Score=127.02 Aligned_cols=147 Identities=13% Similarity=0.227 Sum_probs=123.9
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhh----hHHHHHHHHHHHHHHHhhHHh
Q 018453 91 LSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP----DFIIMVVGRFVFGIGIGLAMH 166 (355)
Q Consensus 91 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~r~l~G~~~g~~~~ 166 (355)
++....+.+.++..++.+++.++.|+++||+|+|+.++++.++.+++..+..... +.+.+++.+++.|++.+...+
T Consensus 248 ~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~ 327 (418)
T TIGR00889 248 FVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNI 327 (418)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence 3457789999999999999999999999999999999999999888876666532 245677789999999998888
Q ss_pred HHHHHHHhhcCCCchhHHHHHHH-HHHHHHHHHHHHHHHHhhcccc-----chhHHHHhHHHHHHHHHH-HHhhcccc
Q 018453 167 AAPMYIAETAPTPMRGQLISLKE-FFIVLGMVGGYGIGSLLVDLVA-----GWRYMYGASTPLAVIMGM-GMWWLPAS 237 (355)
Q Consensus 167 ~~~~~~~e~~~~~~r~~~~~~~~-~~~~~g~~~~~~i~~~l~~~~~-----~w~~~~~~~~~~~~~~~~-~~~~~~es 237 (355)
....++.|.+|+++|+++.++.+ ...++|.++||.+++.+.+..+ ||+..|.+.+++.+++.+ ..++++|+
T Consensus 328 ~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 328 SGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 88999999999999999999997 6789999999999999987642 699999988888776554 44556665
No 106
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.54 E-value=5e-13 Score=125.61 Aligned_cols=150 Identities=20% Similarity=0.273 Sum_probs=116.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHH----HhccHHHHHHH-HHHHHHHHHHHHhhhhHH---------------
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIAD----ILGRRRELILA-ALLYLVGALVTALAPDFI--------------- 148 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~Grr~~~~~~-~~l~~~~~~~~~~~~~~~--------------- 148 (355)
+|.+....+++..+..+..++.+++.|+++| |+|||+.++++ .+..+++.++.+++++..
T Consensus 34 lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~ 113 (477)
T TIGR01301 34 LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRA 113 (477)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHH
Confidence 7999999999999999999999999999999 59999998874 566666666776665532
Q ss_pred --HHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCch--hHHHHHHHHHHHHHHHHHHHHHHHh--hcc------------c
Q 018453 149 --IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMR--GQLISLKEFFIVLGMVGGYGIGSLL--VDL------------V 210 (355)
Q Consensus 149 --~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r--~~~~~~~~~~~~~g~~~~~~i~~~l--~~~------------~ 210 (355)
..+++-.+..++.....+...+++.|.+|+++| +.+.++.+...++|.++|+.+++.. .+. .
T Consensus 114 i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~ 193 (477)
T TIGR01301 114 IIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSC 193 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccccccccc
Confidence 222333344557777788889999999998865 5799999999999999999998864 111 0
Q ss_pred cchhHHHHhHHHHHHHHHHHH-hhcccch
Q 018453 211 AGWRYMYGASTPLAVIMGMGM-WWLPASP 238 (355)
Q Consensus 211 ~~w~~~~~~~~~~~~~~~~~~-~~~~esp 238 (355)
.+.+..|++.+++.++..+.. +..+|.|
T Consensus 194 ~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 194 ANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred chHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 167889999888877765544 5578865
No 107
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.54 E-value=1.4e-12 Score=120.38 Aligned_cols=146 Identities=16% Similarity=0.162 Sum_probs=124.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (355)
+|.++.+.+++.+...+...++.++.|++.||+|||+.+.++.++..+..+...+.++.+.+++.+++.|++.|...+..
T Consensus 230 ~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 309 (375)
T TIGR00899 230 LGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIG 309 (375)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68888899998888777888889999999999999999888877766666666666778888888999999998888888
Q ss_pred HHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhccc
Q 018453 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPA 236 (355)
Q Consensus 169 ~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e 236 (355)
..++.|..|+ ++++++++++....+|..++|.+.+.+.+.. ||+..|++.+++++++.+..++++|
T Consensus 310 ~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 310 MLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERW-SYHAVYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHHHHHHheecC
Confidence 8899999875 5679999999999999999999999998887 8999999988888877776665543
No 108
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.51 E-value=8.9e-13 Score=125.61 Aligned_cols=156 Identities=19% Similarity=0.066 Sum_probs=117.9
Q ss_pred cccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH--HHhhhhHH
Q 018453 71 TSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALV--TALAPDFI 148 (355)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~--~~~~~~~~ 148 (355)
....+|.+..+ .+|++..+.++..+...++.+++.++.|+++||+|||+.+.....+..++..+ ....++.+
T Consensus 277 ~~~~~p~yl~~------~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (467)
T PRK09556 277 IDNWSPVYAFQ------ELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEY 350 (467)
T ss_pred HHHHHHHHHHH------ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHH
Confidence 44556655532 17999999999999999999999999999999999998776654444333222 22334566
Q ss_pred HHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHH-HHHHHHHHHHHhhc------------cccchhH
Q 018453 149 IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVL-GMVGGYGIGSLLVD------------LVAGWRY 215 (355)
Q Consensus 149 ~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~-g~~~~~~i~~~l~~------------~~~~w~~ 215 (355)
.+.+.+++.|++..+..........|.+|++.||++.|+.+....+ |..++|.+.|.+.+ .. +|+.
T Consensus 351 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~-~~~~ 429 (467)
T PRK09556 351 MYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLT-GWAG 429 (467)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccccccccc-ChHH
Confidence 6667888888655444444456777999999999999999988886 77999999999998 44 7999
Q ss_pred HHHhHHHHHHHHHHHHhh
Q 018453 216 MYGASTPLAVIMGMGMWW 233 (355)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~ 233 (355)
.|++.+++++++.+..++
T Consensus 430 ~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 430 TFAALDIAAIGCICLMAI 447 (467)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999887777776655544
No 109
>PRK12382 putative transporter; Provisional
Probab=99.51 E-value=1.3e-12 Score=121.66 Aligned_cols=137 Identities=19% Similarity=0.191 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhh
Q 018453 96 IGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAET 175 (355)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~ 175 (355)
.++..+.+.++.++++++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++..++.|++.+...+.....+.|.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 330 (392)
T PRK12382 251 AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKR 330 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 45666778888899999999999999999999999888888888877778888888899999999998888888889999
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhh
Q 018453 176 APTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (355)
Q Consensus 176 ~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~ 233 (355)
+|+++||+..++.+....+|..++|.+.+.+.+.. ||+..|.+.+++.++..+..++
T Consensus 331 ~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 331 VPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSF-GYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999887 8999999988887776655443
No 110
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.50 E-value=2.4e-12 Score=119.45 Aligned_cols=140 Identities=13% Similarity=0.063 Sum_probs=126.5
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (355)
+|.+..+.|.+.+...++.+++.++.+++.||+|+|+.+.++.++..+..++.++.++.+.+++.+++.|++.|...+..
T Consensus 235 ~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~ 314 (382)
T TIGR00902 235 AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAA 314 (382)
T ss_pred CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCchhHHHHHHH-HHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHH
Q 018453 169 PMYIAETAPTPMRGQLISLKE-FFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGM 231 (355)
Q Consensus 169 ~~~~~e~~~~~~r~~~~~~~~-~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~ 231 (355)
..++.+. |+++|+++.++++ ...++|.++++.++|.+.+.. |+ ..|++.++++++++++.
T Consensus 315 ~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~-g~-~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 315 MRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL-GA-GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cH-HHHHHHHHHHHHHHHHH
Confidence 9999988 9999999999986 578899999999999999987 76 66777777766655443
No 111
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.50 E-value=9.3e-13 Score=124.97 Aligned_cols=142 Identities=18% Similarity=0.181 Sum_probs=118.8
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccHHHHHH--HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADIL--GRRRELIL--AALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLA 164 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--Grr~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~ 164 (355)
+|++..+.+++.++..++.++++++.|+++||. ++|+...+ +.++.+++.++....++++.+++.+++.|++.+..
T Consensus 271 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~ 350 (455)
T TIGR00892 271 KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSV 350 (455)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchH
Confidence 688999999999999999999999999999973 34433333 33444455555666788888889999999999999
Q ss_pred HhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHH
Q 018453 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMG 230 (355)
Q Consensus 165 ~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~ 230 (355)
.+....++.|.+|++++++.+++++....+|.++||.+++.+.+..++|+..|++.+++.+++.+.
T Consensus 351 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 351 GALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred HHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999887757999999988876665543
No 112
>PRK03699 putative transporter; Provisional
Probab=99.49 E-value=2.2e-12 Score=120.25 Aligned_cols=158 Identities=13% Similarity=0.024 Sum_probs=128.9
Q ss_pred ccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 018453 72 SCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMV 151 (355)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~ 151 (355)
....|.+.++ .+|++..+.+++.+.+.++..++.++.|+++||+++|+.+.....+..+..++....++.+.+.
T Consensus 225 ~~~~p~~l~~------~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 298 (394)
T PRK03699 225 ISWVPEYAQK------KFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLL 298 (394)
T ss_pred HHHHHHHHHH------HcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHH
Confidence 4456666542 1689999999999999999999999999999999999998887777777666666667776677
Q ss_pred HHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHH
Q 018453 152 VGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGM 231 (355)
Q Consensus 152 ~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~ 231 (355)
+..++.|++.+..++....+..|..| +.++...+....+..+|..++|.+.+.+.+.. ||+..+++.+++.+++.+..
T Consensus 299 ~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~-g~~~~~~~~~~~~~~~~~~~ 376 (394)
T PRK03699 299 YAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHF-GLQAALLTANGLYAVVFVMC 376 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHh-CchhhhhhhHHHHHHHHHHH
Confidence 77888999888888888888888776 44678888888899999999999999999887 89999998888877776655
Q ss_pred hhcccc
Q 018453 232 WWLPAS 237 (355)
Q Consensus 232 ~~~~es 237 (355)
.++++.
T Consensus 377 ~~~~~~ 382 (394)
T PRK03699 377 ILLGFV 382 (394)
T ss_pred HHHHHH
Confidence 555443
No 113
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.48 E-value=8.6e-12 Score=119.16 Aligned_cols=177 Identities=21% Similarity=0.231 Sum_probs=141.9
Q ss_pred CCcchHHHHHHHHHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 018453 43 ENYSVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILG 122 (355)
Q Consensus 43 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G 122 (355)
.....+..|..-++..++..++......... + ..-|+...+++.++..+..++.++++|.+.||+.
T Consensus 8 r~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~------~--------lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~d 73 (524)
T PF05977_consen 8 RNRNFRRLWIAQLISNLGDWMQTVALAWLVT------Q--------LTGSPLMVALVQAASTLPILLLSLFAGALADRFD 73 (524)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHH------H--------HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 3445666777777777777666655433221 1 3447889999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHH
Q 018453 123 RRRELILAALLYLVGALVTALA-----PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMV 197 (355)
Q Consensus 123 rr~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~ 197 (355)
||++++.+.++..+..++.++. .+.+.+++.-++.|++.+...|...+.+.|..|+++...++++.++..++..+
T Consensus 74 rrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~ 153 (524)
T PF05977_consen 74 RRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARI 153 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHh
Confidence 9999999888776555444332 36788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhc
Q 018453 198 GGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWL 234 (355)
Q Consensus 198 ~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 234 (355)
+||.++|.++... |-.+.|++.++..++..+....+
T Consensus 154 iGPalgG~Lva~~-G~~~~f~inalsfl~~i~~l~~~ 189 (524)
T PF05977_consen 154 IGPALGGILVAFF-GAAAAFLINALSFLISILALLRW 189 (524)
T ss_pred ccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999998876 78888888776655544443333
No 114
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.48 E-value=8.8e-12 Score=115.96 Aligned_cols=174 Identities=15% Similarity=0.010 Sum_probs=127.4
Q ss_pred HHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHH--HHHHHHHHHHHHHHH-HHHHHHhccHHHHHHHH
Q 018453 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLI--TSGSLYGALIGSILA-FNIADILGRRRELILAA 131 (355)
Q Consensus 55 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~--~~~~~~~~~~~~~~~-g~l~dr~Grr~~~~~~~ 131 (355)
+.+...++..|+..+...+.+|.+.++ .|.+.++.|++ .+...+.-.+.+++. ++..||+|||+..++..
T Consensus 4 ~~~~~ly~~~g~~~~~~~p~lp~~l~~-------~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~ 76 (390)
T TIGR02718 4 ITLGLLYLSQGIPIGLAMDALPTLLRE-------DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPM 76 (390)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHH
Confidence 344455677888888888999999886 79999999997 356677777778777 45789999998875555
Q ss_pred HHH-HHHHHHHH-h--hhh-HHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 018453 132 LLY-LVGALVTA-L--APD-FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL 206 (355)
Q Consensus 132 ~l~-~~~~~~~~-~--~~~-~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 206 (355)
.+. .+.....+ + ..+ ...++...++.++..+...+....+..|..++++++...+....+..+|.++|+.+.+.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l 156 (390)
T TIGR02718 77 QCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVL 156 (390)
T ss_pred HHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332 21222222 1 222 333344455566677777777788888999888889888889998999999999988888
Q ss_pred hccccchhHHHHhHHHHHHHHHHHHhhccc
Q 018453 207 VDLVAGWRYMYGASTPLAVIMGMGMWWLPA 236 (355)
Q Consensus 207 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e 236 (355)
.+.. |||..|++.+++.++..+..++++|
T Consensus 157 ~~~~-gw~~~f~~~a~l~~~~~~~~~~~~~ 185 (390)
T TIGR02718 157 FGKF-GQRPAFLLVACVPLASLVCVLWLKD 185 (390)
T ss_pred HHHh-CHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8887 9999999998887776555555543
No 115
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.48 E-value=3e-12 Score=120.10 Aligned_cols=142 Identities=15% Similarity=0.045 Sum_probs=103.5
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGR-RRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 167 (355)
+|++..+.|++.+++.++.++++++.|.++||+|| |+.+.++.++..+...+..+.++++.+++.|++.|++.+...+.
T Consensus 33 ~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 112 (418)
T TIGR00889 33 LHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAYMPTIAL 112 (418)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHccHHHH
Confidence 79999999999999999999999999999999965 77888888888888888888888999999999999987666555
Q ss_pred HHHHHH--------hhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhcccch
Q 018453 168 APMYIA--------ETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASP 238 (355)
Q Consensus 168 ~~~~~~--------e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~esp 238 (355)
...... |......|.+..| .+|.++++.+++.+... ..|+ .|++.+++.++..+..+++||+|
T Consensus 113 ~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~-~~~~-~f~~~~~~~~~~~~~~~~~~e~~ 183 (418)
T TIGR00889 113 TNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIE-LSNI-QLYITAGSSALLGVFALTLPDIP 183 (418)
T ss_pred HHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhccc-chhH-HHHHHHHHHHHHHHHHhcCCCCC
Confidence 544322 2222223444444 36788888888877322 1354 45555555555555556678765
No 116
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.46 E-value=1.5e-12 Score=121.19 Aligned_cols=131 Identities=21% Similarity=0.206 Sum_probs=109.8
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH-HHHhhhhHHHHHHHHHHHHHHHhhHHhH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGAL-VTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 167 (355)
+|++..+.+++.+...++.+++.++.|++.||+|||+.+.++.++..+..+ +....++.+.+.+..++.|++.+...+.
T Consensus 269 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (405)
T TIGR00891 269 LGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGI 348 (405)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhh
Confidence 688999999999999999999999999999999999998887776533333 3333456666667777888877777788
Q ss_pred HHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHh
Q 018453 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGA 219 (355)
Q Consensus 168 ~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~ 219 (355)
.+.++.|.+|+++|++++|+.+....+|..++|++.+.+.+..+.|+..+..
T Consensus 349 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 349 LPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 8899999999999999999999999999999999999999987348776654
No 117
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.46 E-value=2.8e-12 Score=119.80 Aligned_cols=138 Identities=18% Similarity=0.272 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHh
Q 018453 95 EIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAE 174 (355)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e 174 (355)
..+.+.++..++.+++.+..|++.||+|||+.+..+.++..++.+...+.++.+.+.+.+++.|++.+...+.....+.+
T Consensus 259 ~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 338 (408)
T PRK09874 259 ISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVY 338 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHH
Confidence 35667777888889999999999999999999999888888877777777788888889999999999999999999999
Q ss_pred hcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhh
Q 018453 175 TAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (355)
Q Consensus 175 ~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~ 233 (355)
..|+++||+.+++.+....+|..+||.+++.+.+.. ||+..|++.+++.++..+..++
T Consensus 339 ~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~-g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 339 NSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANY-GFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred hCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhc-chhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998887 8999999998887776655443
No 118
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.46 E-value=2e-12 Score=119.59 Aligned_cols=143 Identities=21% Similarity=0.138 Sum_probs=105.8
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH--HHHH------HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRR--ELIL------AALLYLVGALVTALAPDFIIMVVGRFVFGIG 160 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~--~~~~------~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~ 160 (355)
+|.+..+.+++.+...++..++.++.|++.||+|||+ .... +.++..+..+.....++.+..+...++.+.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (399)
T TIGR00893 246 RGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFG 325 (399)
T ss_pred hcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhc
Confidence 6888999999999999999999999999999999996 1111 1111111111111122334444444444444
Q ss_pred HhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHh
Q 018453 161 IGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMW 232 (355)
Q Consensus 161 ~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~ 232 (355)
.+ ..+....++.|.+|+++|++++++.+....+|..++|.+.+.+.+..++|+..|++.++++++..+..+
T Consensus 326 ~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 326 LG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred hh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 44 788889999999999999999999999999999999999999998873399999988888777655443
No 119
>PRK09952 shikimate transporter; Provisional
Probab=99.46 E-value=6.2e-12 Score=118.80 Aligned_cols=149 Identities=17% Similarity=0.038 Sum_probs=113.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHh---h-hhHHHHHHHHHHHHHHHhhH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL---A-PDFIIMVVGRFVFGIGIGLA 164 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~---~-~~~~~~~~~r~l~G~~~g~~ 164 (355)
+|.+......+.....+..+++.++.|+++||+|||+.++.+.++..++.+.... . ++.+.+++..++.|++.+..
T Consensus 281 ~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 360 (438)
T PRK09952 281 LGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMV 360 (438)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHH
Confidence 5777776666666667777888999999999999999988887766555433322 1 23444455667778888888
Q ss_pred HhHHHHHHHhhcCCCchhHHHHHHH-HHHHHHHHHHHHHHHHhhccc-cchhHHHHhHHHHHHHHHHHHhhcccc
Q 018453 165 MHAAPMYIAETAPTPMRGQLISLKE-FFIVLGMVGGYGIGSLLVDLV-AGWRYMYGASTPLAVIMGMGMWWLPAS 237 (355)
Q Consensus 165 ~~~~~~~~~e~~~~~~r~~~~~~~~-~~~~~g~~~~~~i~~~l~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~es 237 (355)
.+....++.|.+|++.|+.+.++.+ .+..+|+.++|.+.+.+.+.. ++|+..+.+.++++++..+..+.++|+
T Consensus 361 ~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 361 VCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred HHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHcccc
Confidence 8888999999999999999999854 455689999999999998743 358888888888777777666666664
No 120
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.45 E-value=7e-12 Score=116.27 Aligned_cols=141 Identities=13% Similarity=0.126 Sum_probs=116.8
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (355)
.|.+..+.+++.+...++.++++++.|++.||+|+|+.+..+..+.+++.+... . ........++.|++.+...+..
T Consensus 230 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~~~~~~p~~ 306 (381)
T PRK03633 230 QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGAAGFTLYPVA 306 (381)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHHHHhHHHHH
Confidence 588888999999999999999999999999999999998888877777665443 2 2333456778888877788888
Q ss_pred HHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhh
Q 018453 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (355)
Q Consensus 169 ~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~ 233 (355)
..++.|..|+++++...+.......+|.++||.+++.+.+.. +|++.|.+.+.+.++..+..+.
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~-g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 307 MAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNY-SDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CccHHHHHHHHHHHHHHHHHHh
Confidence 899999999888888888888899999999999999999887 8999999888777665544433
No 121
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.43 E-value=9.2e-13 Score=124.33 Aligned_cols=149 Identities=17% Similarity=0.127 Sum_probs=116.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHH----hccHH-HHHHHHHHHHHHHHHHHhhhh------HHHHHHHHHHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI----LGRRR-ELILAALLYLVGALVTALAPD------FIIMVVGRFVF 157 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr~-~~~~~~~l~~~~~~~~~~~~~------~~~~~~~r~l~ 157 (355)
+|+++.+.|++.++..+..++..++.|.++|| +|||| .++.+..+.+++.+++.+.++ ...+++.+++.
T Consensus 30 ~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (437)
T TIGR00792 30 LGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILL 109 (437)
T ss_pred cCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHH
Confidence 79999999999999999999999999999998 67754 566777788877777766543 35566777888
Q ss_pred HHHHhhHHhHHHHHHHhhc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHhhc------cccchhHHHHhHHHHHHHHHHH
Q 018453 158 GIGIGLAMHAAPMYIAETA-PTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD------LVAGWRYMYGASTPLAVIMGMG 230 (355)
Q Consensus 158 G~~~g~~~~~~~~~~~e~~-~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~------~~~~w~~~~~~~~~~~~~~~~~ 230 (355)
+++.+...+...++..|.. ++++|++..++.+.+..+|..+++.+.+.+.. ...+|++.+++.++++++..+.
T Consensus 110 ~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~ 189 (437)
T TIGR00792 110 GLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLII 189 (437)
T ss_pred HHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHH
Confidence 8888877777778888887 56889999999999888988877776655542 1238999999888887766544
Q ss_pred -Hhhcccc
Q 018453 231 -MWWLPAS 237 (355)
Q Consensus 231 -~~~~~es 237 (355)
.++.+|+
T Consensus 190 ~~~~~~e~ 197 (437)
T TIGR00792 190 CFFGTKER 197 (437)
T ss_pred HHcCCEec
Confidence 3445654
No 122
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.42 E-value=1.3e-11 Score=117.15 Aligned_cols=156 Identities=16% Similarity=0.094 Sum_probs=108.4
Q ss_pred ccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccHHHHH-HHHHHHHHHHHHHHh--hhh
Q 018453 72 SCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADIL--GRRRELI-LAALLYLVGALVTAL--APD 146 (355)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--Grr~~~~-~~~~l~~~~~~~~~~--~~~ 146 (355)
...+|.+.++ ..|++..+.+++...+.++.+++.++.|+++||+ |||.... ....+..++.++..+ ..+
T Consensus 273 ~~~~P~~l~~------~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~ 346 (452)
T PRK11273 273 LDWSPTYLKE------VKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGN 346 (452)
T ss_pred HHHHHHHHHH------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccC
Confidence 4456666552 1578888899999999999999999999999999 5554322 222333333332222 234
Q ss_pred HHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHH-HHHHHHHHhhccccchhHHHHhHHHHHH
Q 018453 147 FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMV-GGYGIGSLLVDLVAGWRYMYGASTPLAV 225 (355)
Q Consensus 147 ~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~-~~~~i~~~l~~~~~~w~~~~~~~~~~~~ 225 (355)
.+...++.++.|.+..........+..|.+|++.||+++|+.+....+|+. ++|.+.+.+.+.. ||+..|++.++.++
T Consensus 347 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~-g~~~~f~~~~~~~~ 425 (452)
T PRK11273 347 PTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF-GWDGGFMVMIGGSI 425 (452)
T ss_pred hHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHh-cchHHHHHHHHHHH
Confidence 444444555555544333334455678999999999999999888888765 4799999999887 89999998888777
Q ss_pred HHHHHHhhc
Q 018453 226 IMGMGMWWL 234 (355)
Q Consensus 226 ~~~~~~~~~ 234 (355)
++++...++
T Consensus 426 ~~~~~~~~~ 434 (452)
T PRK11273 426 LAVILLIVV 434 (452)
T ss_pred HHHHHHHHH
Confidence 766555443
No 123
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.42 E-value=1.4e-11 Score=114.81 Aligned_cols=149 Identities=18% Similarity=0.184 Sum_probs=118.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHhhHHhH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP-DFIIMVVGRFVFGIGIGLAMHA 167 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~r~l~G~~~g~~~~~ 167 (355)
+|.+..+.+.+.+.+.++.+++.++.|++.||+|||+.+..+..+..++.++....+ +...+ .-++.|++.+...+.
T Consensus 235 ~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~l~g~g~g~~~~~ 312 (393)
T PRK09705 235 IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL--WAMVCGLGLGGAFPL 312 (393)
T ss_pred cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH--HHHHHHHhccchHHH
Confidence 688999999999999999999999999999999999998888877777766554323 22222 234668887777777
Q ss_pred HHHHHHhhcC-CCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHH-Hhhcccchh
Q 018453 168 APMYIAETAP-TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMG-MWWLPASPR 239 (355)
Q Consensus 168 ~~~~~~e~~~-~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~esp~ 239 (355)
......+..+ +++|++..++.+....++..++|.+.+++.+..++|...|++..+.+++..+. ..+.||++.
T Consensus 313 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK09705 313 CLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFP 386 (393)
T ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 7766677774 57899999999999999999999999999998767888888877776665444 455677654
No 124
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.42 E-value=3.5e-12 Score=118.10 Aligned_cols=137 Identities=23% Similarity=0.158 Sum_probs=110.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH--HHHHh--hhhHHHHHHHHHHHHHHHhhH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGA--LVTAL--APDFIIMVVGRFVFGIGIGLA 164 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~--~~~~~--~~~~~~~~~~r~l~G~~~g~~ 164 (355)
+|.+..+.+.+.+...++..++.++.|+++||+|||+.+.....+..+.. ++..+ .++.+.+++..++.|++.+..
T Consensus 250 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 329 (394)
T TIGR00883 250 LGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMY 329 (394)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Confidence 68888999999999999999999999999999999998775554443333 12222 245667777888899998889
Q ss_pred HhHHHHHHHhhcCCCchhHHHHH-HHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHH
Q 018453 165 MHAAPMYIAETAPTPMRGQLISL-KEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAV 225 (355)
Q Consensus 165 ~~~~~~~~~e~~~~~~r~~~~~~-~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~ 225 (355)
.+....++.|.+|+++|+++.++ .+....+|..++|.+++.+.+..++|+..++..++.++
T Consensus 330 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 330 TGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred hhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 99999999999999999999998 46667789999999999999887448887776655544
No 125
>PRK03545 putative arabinose transporter; Provisional
Probab=99.42 E-value=1.4e-11 Score=114.53 Aligned_cols=142 Identities=20% Similarity=0.089 Sum_probs=116.9
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH-HHHHhhhhHHHHHHHHHHHHHHHhhHHhH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGA-LVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 167 (355)
+|.+..+.+++.+...++.+++.++.|+++||+|||..+. +..+..++. ++....++.+.+.++.++.|++.+...+.
T Consensus 236 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~ 314 (390)
T PRK03545 236 AGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLA 314 (390)
T ss_pred cCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHH
Confidence 5888889999999999999999999999999999887544 444444443 33345567778888889999988777777
Q ss_pred HHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhh
Q 018453 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (355)
Q Consensus 168 ~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~ 233 (355)
....+.+..| ++|+++++++.....+|..+||++++.+.+.. |++..|++.+++.+++++....
T Consensus 315 ~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~-g~~~~~~~~~~~~~~~~~~~~~ 378 (390)
T PRK03545 315 MQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHL-GLSSIGYVGAALALAALVWSIL 378 (390)
T ss_pred HHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHHHHHHHH
Confidence 7788888876 68899999999999999999999999999987 9999999988888776665444
No 126
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.42 E-value=4.8e-12 Score=120.27 Aligned_cols=148 Identities=15% Similarity=0.029 Sum_probs=114.8
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh-----h------hHHHHHHHHHHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-----P------DFIIMVVGRFVF 157 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~-----~------~~~~~~~~r~l~ 157 (355)
+|++..+.++......++.+++.++.|+++||+|||+.+.++.++.+++.++..+. + +...+....++.
T Consensus 314 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (481)
T TIGR00879 314 AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFI 393 (481)
T ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHH
Confidence 68888888899999999999999999999999999999998888887777766521 1 222222223332
Q ss_pred HHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHh-hccc
Q 018453 158 GIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMW-WLPA 236 (355)
Q Consensus 158 G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~-~~~e 236 (355)
+....+..+....++.|.+|+++|++++++......+|.++++.+.+.+.+.. +|++.|++.++++++..+..+ +.||
T Consensus 394 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~-~~~~~f~~~~~~~~~~~i~~~~~~~~ 472 (481)
T TIGR00879 394 AFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESI-GVGGVFIFFGGLNVLGLIFVYFFLPE 472 (481)
T ss_pred HHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CccceehhHHHHHHHHHHHHheeccc
Confidence 22222334566677799999999999999999999999999999999998876 899999988888777665544 4565
Q ss_pred c
Q 018453 237 S 237 (355)
Q Consensus 237 s 237 (355)
+
T Consensus 473 ~ 473 (481)
T TIGR00879 473 T 473 (481)
T ss_pred C
Confidence 4
No 127
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.41 E-value=2.1e-11 Score=113.03 Aligned_cols=190 Identities=19% Similarity=0.198 Sum_probs=140.2
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018453 40 PSPENYSVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIAD 119 (355)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d 119 (355)
.++.+.+|+..++..+..++..+.......... |...+ =|.+.+.+..|++.++..+|.+++++..|+++.
T Consensus 26 ~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~w---pYl~~------lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~ 96 (488)
T KOG2325|consen 26 LDERKTNWRSIYLALLNSFLVAVQFSIYLTSMW---PYLQK------LDPTATATFFGLVIAASSLGHAIFSLIFGIWSN 96 (488)
T ss_pred ccccCCchHhHHHHHHHHHHHhhhheEEEeecc---hhhhh------cCCCCCcchhhHHHHHHHHHHHhcchhhccccc
Confidence 344556777777775555554444333332222 22222 114678889999999999999999999999999
Q ss_pred Hhcc-HHHHHHHHHHHHHHHHHHH-hh---h-hHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHH
Q 018453 120 ILGR-RRELILAALLYLVGALVTA-LA---P-DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIV 193 (355)
Q Consensus 120 r~Gr-r~~~~~~~~l~~~~~~~~~-~~---~-~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~ 193 (355)
|.+. |+.++++.++..++.++.. +. + ..+.++++|++.|+|.| .....-.|+++-...++|.++++....+..
T Consensus 97 k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~v 175 (488)
T KOG2325|consen 97 KTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSGGFV 175 (488)
T ss_pred ccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhhHHH
Confidence 9986 8888999999999999983 32 3 57889999999999977 567778899998888999999999999999
Q ss_pred HHHHHHHHHHHHhhccc------------cchhHHHHhHHHHHHHHHHH-Hhhcccchh
Q 018453 194 LGMVGGYGIGSLLVDLV------------AGWRYMYGASTPLAVIMGMG-MWWLPASPR 239 (355)
Q Consensus 194 ~g~~~~~~i~~~l~~~~------------~~w~~~~~~~~~~~~~~~~~-~~~~~esp~ 239 (355)
+|..+||.+...+.... .-+...-|+.+++.++.++. .++++|.++
T Consensus 176 lg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 176 LGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred HHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 99999999887765311 12345667777777775544 445677643
No 128
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.41 E-value=3.5e-12 Score=122.41 Aligned_cols=137 Identities=13% Similarity=0.049 Sum_probs=109.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHhhHHh
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA--PDFIIMVVGRFVFGIGIGLAMH 166 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~r~l~G~~~g~~~~ 166 (355)
+|++..+.+++.+...++.+++.++.|+++||+|||+.++++.++..+..++.... .+.+.+.+..++.++...+..+
T Consensus 306 ~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (496)
T PRK03893 306 LGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISG 385 (496)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccch
Confidence 78999999999999999999999999999999999999888877766665544332 2334444445554444444556
Q ss_pred HHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHH
Q 018453 167 AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (355)
Q Consensus 167 ~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~ 226 (355)
..+.++.|.+|+++|++.+++.+....+|..+||.+++.+.+.. ||+..+.+.+..+.+
T Consensus 386 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~-g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 386 LLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRL-DLGTALASLSFSLTF 444 (496)
T ss_pred hhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccC-ChHHHHHHHHHHHHH
Confidence 77788999999999999999999999999999999999999887 898887665544433
No 129
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.41 E-value=2.3e-11 Score=113.71 Aligned_cols=152 Identities=13% Similarity=0.084 Sum_probs=116.4
Q ss_pred cccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH-HHHHHHHHHHHHHHh-----hhh
Q 018453 73 CATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELI-LAALLYLVGALVTAL-----APD 146 (355)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~-~~~~l~~~~~~~~~~-----~~~ 146 (355)
...|.+.++ +|++..+.+++.+...++..++.++.|+++||+|||+.+. .+.+...+..+.... .++
T Consensus 243 ~~~p~~~~~-------~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~ 315 (402)
T TIGR00897 243 VFLPMFVAE-------LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHS 315 (402)
T ss_pred HHHHHHHHH-------cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 345555554 6888889999999999999999999999999999988764 333333333322221 235
Q ss_pred HHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHH
Q 018453 147 FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (355)
Q Consensus 147 ~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~ 226 (355)
.+.+++..++.|++.+...+. ...+.|..| ++||+++|+.+....+|..++|.+.+.+.+.. ||...+++.+++.++
T Consensus 316 ~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~-g~~~~~~~~a~~~~i 392 (402)
T TIGR00897 316 FAVALIIAIALGIFLAGYVPL-AAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFF-GAIGVVWIFAALYVV 392 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHH
Confidence 666777888889888766543 456677655 68999999999999999999999999999987 899999998888777
Q ss_pred HHHHHhhc
Q 018453 227 MGMGMWWL 234 (355)
Q Consensus 227 ~~~~~~~~ 234 (355)
..+..+|+
T Consensus 393 ~~~~~~~~ 400 (402)
T TIGR00897 393 SAFLTAFI 400 (402)
T ss_pred HHHHHHHh
Confidence 66665554
No 130
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.40 E-value=2.1e-12 Score=124.39 Aligned_cols=264 Identities=16% Similarity=0.200 Sum_probs=193.3
Q ss_pred HHHHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Q 018453 53 PFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAAL 132 (355)
Q Consensus 53 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 132 (355)
..++.++..+..++..+.+...+.++.+. ++++.++.|++.+.+-++..+...+..++..|..|-+.+-++.+
T Consensus 98 fl~~l~~~~~~q~l~~~y~~s~IttiErR-------F~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~ 170 (735)
T KOG3626|consen 98 FLVLLSLAAFAQGLYVGYFNSVITTIERR-------FKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLV 170 (735)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhh-------cCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechh
Confidence 33555666677777778888888888876 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhh-------------------------------------------------h--HH-HHHHHHHHHHHH
Q 018453 133 LYLVGALVTALAP-------------------------------------------------D--FI-IMVVGRFVFGIG 160 (355)
Q Consensus 133 l~~~~~~~~~~~~-------------------------------------------------~--~~-~~~~~r~l~G~~ 160 (355)
+++++.++.++-+ + .+ +++++.++.|+|
T Consensus 171 ~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG 250 (735)
T KOG3626|consen 171 LMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIG 250 (735)
T ss_pred HHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcC
Confidence 9999999988731 0 22 566889999999
Q ss_pred HhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc------------------cchhHHHHhHHH
Q 018453 161 IGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV------------------AGWRYMYGASTP 222 (355)
Q Consensus 161 ~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~------------------~~w~~~~~~~~~ 222 (355)
....++...+|+-|...+++-...+|+......+|.++|-++++++...+ +.|+.-|+++++
T Consensus 251 ~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~ 330 (735)
T KOG3626|consen 251 ATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGA 330 (735)
T ss_pred CCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999877411 247888888899
Q ss_pred HHHHHHHHHhhcccchhHHHHhhccccCchhhhHHHHHHHHHHHhCCCCCCC-chhHHHHHHHhhccccccccchhhhhh
Q 018453 223 LAVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDS-APTEVDEILTELSYVGEDKEVSLREVF 301 (355)
Q Consensus 223 ~~~~~~~~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (355)
+.++..+.++++|...+.-.++ ...++.+....+++ .+... ...+.-++-....+.++
T Consensus 331 ~~~~~a~p~f~fPk~lp~~~~~----------------~~~~~~~~~k~~~~~~~~~~-----~~~~~ikdfp~s~~~ll 389 (735)
T KOG3626|consen 331 LLLFSAVPLFFFPKELPKSQKR----------------KRARDLHVLKTESGGAKSDK-----TFGKKIKDFPKSIKRLL 389 (735)
T ss_pred HHHHHHHHHHhCcccCcccccc----------------chhhhhcccccccccccCCc-----chhhhHHHHHHHHHHHh
Confidence 9888888888887654311000 00000000000000 00000 00000012233444455
Q ss_pred cccchhHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHhccccchhhhh
Q 018453 302 HGKCLKALIIGAGLVLFQQITGQPSVLYYAASILQDFLQPLMQHGSQ 348 (355)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (355)
++ +++++..+....+...+.++..|+|.|++.....-++..+.
T Consensus 390 ~N----~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~ 432 (735)
T KOG3626|consen 390 SN----PIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANI 432 (735)
T ss_pred cC----chHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHH
Confidence 54 67777777788888889999999999999877665555443
No 131
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.39 E-value=2.3e-11 Score=114.22 Aligned_cols=149 Identities=18% Similarity=0.131 Sum_probs=127.0
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (355)
+|.+..+.+++.+...++.+++.++.+++.||.++++.+..+.++..++.++..+.++.+.+.++.++.|++.+...+..
T Consensus 254 ~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 333 (417)
T PRK10489 254 WQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQ 333 (417)
T ss_pred cCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 68888999999999999999999999999999888888888888888888877777888878888899999888877888
Q ss_pred HHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHH-HHHHHhhcccch
Q 018453 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI-MGMGMWWLPASP 238 (355)
Q Consensus 169 ~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~-~~~~~~~~~esp 238 (355)
..++.|..|++.||++++++.....+|..+|+.+.+.+.+.. |++..+++.+++.++ ..+....+++.+
T Consensus 334 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (417)
T PRK10489 334 YTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMM-TPVASASASGFGLLIIGVLLLLVLGELR 403 (417)
T ss_pred HHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHh-chhhHHHHHHHHHHHHHHHHHHhccccc
Confidence 889999999999999999999999999999999999999887 788888776666554 444445556543
No 132
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.38 E-value=6.4e-11 Score=109.89 Aligned_cols=138 Identities=15% Similarity=0.057 Sum_probs=117.7
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (355)
.|.+..+.|.+.+...++..+..++.|++.||+|+|+.+..+.++.+++.++.++.++.+.+++..++.|++.+...+..
T Consensus 235 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 314 (382)
T PRK11128 235 AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAA 314 (382)
T ss_pred CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 68899999999999999999999999999999999999999999988888888888899988999999999999888888
Q ss_pred HHHHHhhcCCCchhHHHHHHH-HHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHH
Q 018453 169 PMYIAETAPTPMRGQLISLKE-FFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM 229 (355)
Q Consensus 169 ~~~~~e~~~~~~r~~~~~~~~-~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~ 229 (355)
..++.+. +++++++..++.. ....+|..+||.++|.+.+.. |+ ..|+..+++.+++++
T Consensus 315 ~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~-g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 315 MRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL-GA-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cH-HHHHHHHHHHHHHHH
Confidence 8888886 5666788888875 667788899999999999887 66 466666655554443
No 133
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.37 E-value=3.8e-11 Score=114.72 Aligned_cols=149 Identities=15% Similarity=0.086 Sum_probs=110.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhh--hH--HHHHHHHHHHHHHHhh-
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP--DF--IIMVVGRFVFGIGIGL- 163 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~--~~--~~~~~~r~l~G~~~g~- 163 (355)
.|.+....++......++.+++.++.+++.||+|||+.++.+.++.+++.++.+... +. .....+.++.+.+.+.
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (479)
T PRK10077 301 LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMS 380 (479)
T ss_pred cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhcc
Confidence 577777777777788889999999999999999999999999999888887765431 21 1222334444544443
Q ss_pred HHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh------ccccchhHHHHhHHHHHHHHHHHH-hhccc
Q 018453 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV------DLVAGWRYMYGASTPLAVIMGMGM-WWLPA 236 (355)
Q Consensus 164 ~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~------~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e 236 (355)
..+....++.|.+|+++|++++++......+|.++++.+.+.+. +.. +|++.|++.++++++..++. ++.||
T Consensus 381 ~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e 459 (479)
T PRK10077 381 WGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHF-HNGFSYWIYGCMGVLAALFMWKFVPE 459 (479)
T ss_pred ccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhc-cCccHHHHHHHHHHHHHHHHHhcccc
Confidence 23667889999999999999999999999999998876665443 344 78888888877766665544 44566
Q ss_pred ch
Q 018453 237 SP 238 (355)
Q Consensus 237 sp 238 (355)
+.
T Consensus 460 ~~ 461 (479)
T PRK10077 460 TK 461 (479)
T ss_pred CC
Confidence 53
No 134
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.37 E-value=4.5e-14 Score=135.18 Aligned_cols=259 Identities=18% Similarity=0.211 Sum_probs=3.0
Q ss_pred HHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q 018453 58 ALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVG 137 (355)
Q Consensus 58 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~ 137 (355)
++..+..+...+.....+.++.+. |++++++.|++.+.+-++.++..++..++.+|..|-+.+-.+.++++++
T Consensus 9 ~~~~~~q~~~~g~~~~~lttiErR-------F~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g 81 (539)
T PF03137_consen 9 CLLGLFQMMVSGYVNSSLTTIERR-------FGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLG 81 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHH
Confidence 333344477777888888888887 9999999999999999999999999999999999989999999999999
Q ss_pred HHHHHhhh--------------------------------------------------hHHHHHHHHHHHHHHHhhHHhH
Q 018453 138 ALVTALAP--------------------------------------------------DFIIMVVGRFVFGIGIGLAMHA 167 (355)
Q Consensus 138 ~~~~~~~~--------------------------------------------------~~~~~~~~r~l~G~~~g~~~~~ 167 (355)
++++++-+ -+..++++.++.|+|....+++
T Consensus 82 ~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tL 161 (539)
T PF03137_consen 82 SLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTL 161 (539)
T ss_dssp ----------------------------------------------------------------------SSS-------
T ss_pred HHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccc
Confidence 98876511 0356778999999999999999
Q ss_pred HHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc---------------------ccchhHHHHhHHHHHHH
Q 018453 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL---------------------VAGWRYMYGASTPLAVI 226 (355)
Q Consensus 168 ~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~---------------------~~~w~~~~~~~~~~~~~ 226 (355)
..+|+-|..++++-+..+|+.+....+|.++|-++++.+... .+.|+.-|++.+++.++
T Consensus 162 G~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l 241 (539)
T PF03137_consen 162 GITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFL 241 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999877631 12477777777777777
Q ss_pred HHHHHhhcccchhHHHHhhccccCchhhhHHHHHHHHHHHhCCCCCCCchhHHHHHHHhhccccccccchhhhhhcccch
Q 018453 227 MGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCL 306 (355)
Q Consensus 227 ~~~~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (355)
..+.++++|++-+...+.. ++.+. ++.+.+...++ +...++..+...+..++-....+.++++
T Consensus 242 ~aipl~~FPk~lp~~~~~~-----------~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~df~~~l~~Ll~N--- 304 (539)
T PF03137_consen 242 SAIPLFFFPKKLPGTSERQ-----------EEKES--SERKEEDSDKD-SFKDPKSKKSFGKSIKDFPKALKRLLTN--- 304 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHcCCccCCCccccc-----------chhhh--hhcchhhhhhh-cccccccccchhhhhhhHHHHHHHHhcC---
Confidence 7666666765422110000 00000 00000000000 0000000000000112223344444554
Q ss_pred hHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHhccc
Q 018453 307 KALIIGAGLVLFQQITGQPSVLYYAASILQDFLQP 341 (355)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (355)
+.+++..+..........++..|+|.|++.....
T Consensus 305 -p~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~ 338 (539)
T PF03137_consen 305 -PVFMCLILAGVFESFIVSGFATFLPKYLESQFGL 338 (539)
T ss_dssp -----------------------------------
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 6677777777777778899999999999975543
No 135
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.37 E-value=7.3e-11 Score=111.61 Aligned_cols=148 Identities=16% Similarity=0.149 Sum_probs=133.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH--HHHHHHHHHHHHHHHHHHh--------hhhHHHHHHHHHHHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRR--RELILAALLYLVGALVTAL--------APDFIIMVVGRFVFG 158 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr--~~~~~~~~l~~~~~~~~~~--------~~~~~~~~~~r~l~G 158 (355)
+|++..+...+..+..+..++|++++|++.||+|.| ++++++.+++.+..+...+ .++.+.+.+.-++.|
T Consensus 312 lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G 391 (477)
T PF11700_consen 312 LGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIG 391 (477)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999 8888888887666555555 577888999999999
Q ss_pred HHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhccc
Q 018453 159 IGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPA 236 (355)
Q Consensus 159 ~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e 236 (355)
+..|..++..-++.+|+.|+++.+..+|++.+.....+.+||++.+.+.+..++.|+.++...++.++.+++.++++.
T Consensus 392 ~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~ 469 (477)
T PF11700_consen 392 LFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDV 469 (477)
T ss_pred HHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999999999999999999999999999999999988877999999888888888877776654
No 136
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.37 E-value=2.2e-11 Score=113.50 Aligned_cols=140 Identities=13% Similarity=0.159 Sum_probs=120.9
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHH
Q 018453 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAP 169 (355)
Q Consensus 90 ~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~ 169 (355)
+.+....|.+.++..+...++.+..|++.||+|+|+.+.++.++.++...+....++.+.+++.+++.|++.........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667788999999999999999999999999999999999998888888777788888888899999999887777777
Q ss_pred HHHHhhcCCCchhHHHHH-HHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHH
Q 018453 170 MYIAETAPTPMRGQLISL-KEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMG 230 (355)
Q Consensus 170 ~~~~e~~~~~~r~~~~~~-~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~ 230 (355)
.+..+..+++.+++..+. .+....+|..+++.+++++.+.. ||+..|.+.+++.++..++
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~-G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI-GFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc-ccHHHHHHHHHHHHHHHHH
Confidence 788888888888887766 67899999999999999999987 8999999988887765544
No 137
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.37 E-value=2.8e-11 Score=115.64 Aligned_cols=152 Identities=21% Similarity=0.280 Sum_probs=135.0
Q ss_pred cccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 018453 73 CATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVV 152 (355)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 152 (355)
..+|.+.++ .+|.+...+|++.+.+.+|.++|.++.+++.+|+++++.+..+.++.+++.+..++.++.+..++
T Consensus 239 aLlPl~a~~------~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~ 312 (524)
T PF05977_consen 239 ALLPLFARD------VLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALI 312 (524)
T ss_pred HhhhHHHHH------HhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 346666542 27889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHH
Q 018453 153 GRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGM 231 (355)
Q Consensus 153 ~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~ 231 (355)
+.++.|++.....+...+.+.+..|++.||+.++++++....+..+|.++.|.+.+.. |.+..+.+.++..++..++.
T Consensus 313 ~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~-g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 313 ALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHF-GVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999887 88888888777655554443
No 138
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.34 E-value=1.3e-10 Score=111.31 Aligned_cols=148 Identities=16% Similarity=0.168 Sum_probs=117.3
Q ss_pred ccCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH---Hhh-hhHHHHHHHHHHHHHHHhh
Q 018453 89 YDLSSVEIGLITS-GSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVT---ALA-PDFIIMVVGRFVFGIGIGL 163 (355)
Q Consensus 89 ~~~s~~~~~~~~~-~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~---~~~-~~~~~~~~~r~l~G~~~g~ 163 (355)
+|++..+.+++.. ...++.+++.+++|+++||+|+|+.+.++.++.++..++. +.. ++.+.+.+.-++..++.|.
T Consensus 253 ~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~ 332 (491)
T PRK11010 253 VGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGM 332 (491)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Confidence 6899999999974 5668999999999999999999988776666555444322 222 3455555566666666666
Q ss_pred HHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhcccc
Q 018453 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPAS 237 (355)
Q Consensus 164 ~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~es 237 (355)
..+....+..+..+++.+++..++.+....+|..+++.++|.+.+.. ||+..|.+.+++++++++...+++++
T Consensus 333 ~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~-G~~~~f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 333 GTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAH-GWPTFYLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 66777888899999999999999999999999999999999999987 89999999888888877666665543
No 139
>TIGR00895 2A0115 benzoate transport.
Probab=99.34 E-value=2.5e-11 Score=112.63 Aligned_cols=118 Identities=20% Similarity=0.112 Sum_probs=99.9
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (355)
+|.+..+.+++.+...++.+++.++.|++.||+|||+.+....+......++.....+.+.+++..++.|++.+...+..
T Consensus 280 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 359 (398)
T TIGR00895 280 LGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGL 359 (398)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 68889999999999999999999999999999999955444444433333333335667777788899999999999999
Q ss_pred HHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 018453 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL 206 (355)
Q Consensus 169 ~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 206 (355)
..++.|.+|+++|++++++......+|..+||.+.+.+
T Consensus 360 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 360 YALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 99999999999999999999999999999999999875
No 140
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.33 E-value=1e-10 Score=110.08 Aligned_cols=129 Identities=14% Similarity=0.128 Sum_probs=98.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH--HhhHHh
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIG--IGLAMH 166 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~--~g~~~~ 166 (355)
.|.+..+.+.+.+...++.+++.++.|++.||+|||+.+..+.++..+..++....++.....+.-++.|++ ..+..+
T Consensus 261 ~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (426)
T PRK12307 261 EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGG 340 (426)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhH
Confidence 578888999999999999999999999999999999998888877766655444332211122222333332 223345
Q ss_pred HHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHH
Q 018453 167 AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYG 218 (355)
Q Consensus 167 ~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~ 218 (355)
..+.++.|.+|++.||+++|+......+|+.++|.+.+.+.+.. ++....+
T Consensus 341 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~-g~~~~~~ 391 (426)
T PRK12307 341 LVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITM-GLGAALT 391 (426)
T ss_pred HHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcc-cHHHHHH
Confidence 66778899999999999999999999999999999999998876 6655433
No 141
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.33 E-value=1.1e-10 Score=110.19 Aligned_cols=155 Identities=15% Similarity=0.039 Sum_probs=106.9
Q ss_pred cccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh--cc-HHHHHHHHHHHHHHHHHHH--hhh
Q 018453 71 TSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADIL--GR-RRELILAALLYLVGALVTA--LAP 145 (355)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--Gr-r~~~~~~~~l~~~~~~~~~--~~~ 145 (355)
....+|.+..+ ++|++..+.++..+.+.++..++.++.|+++||+ ++ |.......+...+...... ...
T Consensus 262 ~~~~~p~~l~~------~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 335 (434)
T PRK11663 262 INDWGNLYMSE------TLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFA 335 (434)
T ss_pred HHHHHHHHHHh------ccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccc
Confidence 34455655532 1689999999999999999999999999999999 33 3322222111111111111 122
Q ss_pred hHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHH
Q 018453 146 DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAV 225 (355)
Q Consensus 146 ~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~ 225 (355)
+.....+..+..|++...........+.|.+|+++|++++|+.+....+|..++|.+.+.+.+.. ||+..|++.+++++
T Consensus 336 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~-g~~~~f~~~~~~~~ 414 (434)
T PRK11663 336 SYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIW-HWTGFFVVISIAAG 414 (434)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhc-ccHHHHHHHHHHHH
Confidence 33333344444554433333344567789999999999999999999999999999999999887 89999998888877
Q ss_pred HHHHHHh
Q 018453 226 IMGMGMW 232 (355)
Q Consensus 226 ~~~~~~~ 232 (355)
+..+..+
T Consensus 415 ~~~~~~~ 421 (434)
T PRK11663 415 ISALLLL 421 (434)
T ss_pred HHHHHHH
Confidence 7655443
No 142
>PRK10054 putative transporter; Provisional
Probab=99.32 E-value=4.6e-11 Score=111.34 Aligned_cols=142 Identities=12% Similarity=0.079 Sum_probs=117.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHhhHHhH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-PDFIIMVVGRFVFGIGIGLAMHA 167 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~r~l~G~~~g~~~~~ 167 (355)
.+.+....+++.+...+.....+.+.|++.||+++|+.+..+.++..++.++..+. ++.+.+.++.++.|+|.+...+.
T Consensus 239 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~ 318 (395)
T PRK10054 239 SDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPG 318 (395)
T ss_pred cchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhh
Confidence 46677788888888888888888899999999999999998988888887777654 56777777889999999888888
Q ss_pred HHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHh
Q 018453 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMW 232 (355)
Q Consensus 168 ~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~ 232 (355)
....+.+..|++.|+++.+..+ ...+|..+||.+++.+.+.. |....|++.+...++..+..+
T Consensus 319 ~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~-g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 319 EYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTL-PPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHc-ChhhHHHHHHHHHHHHHHHHH
Confidence 8889999999999999988755 56689999999999999988 888888876666555554444
No 143
>TIGR00898 2A0119 cation transport protein.
Probab=99.32 E-value=1e-10 Score=112.55 Aligned_cols=136 Identities=21% Similarity=0.139 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhH--HHHHHHHHHHHHHHhhHHhHHHHHHHhhcC
Q 018453 100 TSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDF--IIMVVGRFVFGIGIGLAMHAAPMYIAETAP 177 (355)
Q Consensus 100 ~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~ 177 (355)
.....+..+++.++.+++.||+|||+.+.++.++.+++.++..+.++. +..++..++.+++.+...+....+..|.+|
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 440 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYP 440 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 344556778889999999999999999999999988888877776543 455556667777777788888999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhcccch
Q 018453 178 TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASP 238 (355)
Q Consensus 178 ~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~esp 238 (355)
++.|++++|+.+....+|++++|.+.+ +.+ . ++...+++.++.++++.+..+++||+.
T Consensus 441 ~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-~-~~~~~~~~~~~~~~~~~~~~~~lpet~ 498 (505)
T TIGR00898 441 TVVRNLGVGVCSTMARVGSIISPFLVY-LGE-K-WLFLPLVLFGGLALLAGILTLFLPETK 498 (505)
T ss_pred HHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-H-HHhhHHHHHHHHHHHHHHHHHcCcCCC
Confidence 999999999999999999999999988 433 2 567778887877777777777788864
No 144
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.32 E-value=3.7e-11 Score=114.29 Aligned_cols=171 Identities=19% Similarity=0.191 Sum_probs=147.6
Q ss_pred HHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHH
Q 018453 58 ALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILG--RRRELILAALLYL 135 (355)
Q Consensus 58 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G--rr~~~~~~~~l~~ 135 (355)
.++..+..+........++.+... .+++..+.+.+.++..+..+++.++.|+++|+.. ++....++.++.+
T Consensus 304 ~~~~~~~~~g~~~p~~~l~~~~~~-------~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~g 376 (509)
T KOG2504|consen 304 ALSNLFAYLGFNVPFVYLPSYAKS-------LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAG 376 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-------cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHH
Confidence 333333334444445556666664 7999999999999999999999999999999988 5566667888888
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhH
Q 018453 136 VGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRY 215 (355)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~ 215 (355)
++.+...++++++.++..-.+.|++.|......+..+.|..+.++-..+.|+...+.+++.++||++++.+.+..++|..
T Consensus 377 l~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~ 456 (509)
T KOG2504|consen 377 LARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDH 456 (509)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeee
Confidence 88888999999999999999999999999999889999999999999999999999999999999999999998877999
Q ss_pred HHHhHHHHHHHHHHHHhhcc
Q 018453 216 MYGASTPLAVIMGMGMWWLP 235 (355)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~ 235 (355)
.|+++++..+++.+.+++.+
T Consensus 457 ~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 457 AFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred ehhhcChHHHHHHHHHHHhH
Confidence 99999999888887777765
No 145
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.31 E-value=6.4e-11 Score=113.91 Aligned_cols=139 Identities=13% Similarity=-0.002 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhh----HHHHHHHHHHHHHHHhhHHhHHHHHHHhhc
Q 018453 101 SGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPD----FIIMVVGRFVFGIGIGLAMHAAPMYIAETA 176 (355)
Q Consensus 101 ~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~ 176 (355)
.+..++.+++.++.+++.||+|||+.++++.++.+++.++.++..+ ...+...-+...++..+..+....+..|.+
T Consensus 342 ~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 421 (502)
T TIGR00887 342 IIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVF 421 (502)
T ss_pred HHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccC
Confidence 3445567778899999999999999998888777776665554321 111111111112222223456677789999
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc---------cchhHHHHhHHHHHHHHHHHHhhcccchh
Q 018453 177 PTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV---------AGWRYMYGASTPLAVIMGMGMWWLPASPR 239 (355)
Q Consensus 177 ~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~---------~~w~~~~~~~~~~~~~~~~~~~~~~esp~ 239 (355)
|++.|+++.++.+....+|++++|.+.+.+.+.. .++...|++.++++++..+..+++||+..
T Consensus 422 p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~ 493 (502)
T TIGR00887 422 PTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETKG 493 (502)
T ss_pred chhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEeccCCC
Confidence 9999999999999999999999999999888632 14566777777777766666667788743
No 146
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.30 E-value=5.6e-10 Score=105.37 Aligned_cols=119 Identities=19% Similarity=0.266 Sum_probs=101.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHhhHHhHHHH
Q 018453 92 SSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-PDFIIMVVGRFVFGIGIGLAMHAAPM 170 (355)
Q Consensus 92 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~r~l~G~~~g~~~~~~~~ 170 (355)
+....+++.+...++.+++.++.+++.||+|+|+.+.++.++.+++.++..+. ++.+.+++..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567788888899999999999999999999999999988888887776664 35667777888899999988888888
Q ss_pred HHHhhcC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 018453 171 YIAETAP-------TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210 (355)
Q Consensus 171 ~~~e~~~-------~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 210 (355)
+++|..+ ++.+|...++.+....+|..+++.+.+.+.+..
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~ 381 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGII 381 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9888865 566899999999999999999999999988654
No 147
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.29 E-value=2.7e-10 Score=107.49 Aligned_cols=146 Identities=13% Similarity=-0.003 Sum_probs=96.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH--h--hhhHHHHHHHHHHHHHHHhhH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA--L--APDFIIMVVGRFVFGIGIGLA 164 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~--~--~~~~~~~~~~r~l~G~~~g~~ 164 (355)
+|.+..+.+...++..++..+++++.|+++||+|||+.+.+..++..+..+... . ..+....+..-.+.+++.+..
T Consensus 274 ~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (432)
T PRK10406 274 AGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFY 353 (432)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHH
Confidence 688888889988888888899999999999999999988776555433332111 1 122222222222233333444
Q ss_pred HhHHHHHHHhhcCCCchhHHHHHHHHHHHH-HHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhcc
Q 018453 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVL-GMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLP 235 (355)
Q Consensus 165 ~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~-g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 235 (355)
.+....++.|++|++.|++++|+.+...++ ++...|.+.+.+ +..+.|...+++.++..++..+..++++
T Consensus 354 ~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~l~ 424 (432)
T PRK10406 354 TSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSLMLH 424 (432)
T ss_pred HHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence 455677889999999999999998765443 344577777754 4443466666666666666655555543
No 148
>PRK10504 putative transporter; Provisional
Probab=99.29 E-value=2.6e-10 Score=108.81 Aligned_cols=122 Identities=19% Similarity=0.237 Sum_probs=104.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHhhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA---PDFIIMVVGRFVFGIGIGLAM 165 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~r~l~G~~~g~~~ 165 (355)
+|.++.+.++......++..++.++.+++.||+|+|+.+..+.++.++..++..+. .+.+.+.+..++.|++.+...
T Consensus 292 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (471)
T PRK10504 292 LGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRF 371 (471)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHH
Confidence 58889999999999999999999999999999999999998888887776665553 334444556778888888888
Q ss_pred hHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 018453 166 HAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210 (355)
Q Consensus 166 ~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 210 (355)
+.....+.+..|++.++.+.++.+....+|..+|+.+++.+.+..
T Consensus 372 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~ 416 (471)
T PRK10504 372 SSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLF 416 (471)
T ss_pred HHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888999999999999999999999999999999999999887644
No 149
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.29 E-value=5e-10 Score=100.69 Aligned_cols=131 Identities=15% Similarity=0.169 Sum_probs=106.7
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (355)
+|+++.+.++..+.+..+.++|.++.+++.||+|+|+.+.++.++..++.++....++...+ .+-++.|++.+..+|..
T Consensus 173 ~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~~ 251 (310)
T TIGR01272 173 LGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM-WFVLALGLFNSIMFPTI 251 (310)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999888888888777666555443333 35568899999999999
Q ss_pred HHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHH
Q 018453 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPL 223 (355)
Q Consensus 169 ~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~ 223 (355)
.....+..|++ .+++.++. ....+|++++|.+.|.+.+.. |.+..|++..+.
T Consensus 252 ~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~-g~~~a~~v~~~~ 303 (310)
T TIGR01272 252 FSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCL-GIQLAFALPVPC 303 (310)
T ss_pred HHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhc-cchHHHHHHHHH
Confidence 98888888754 46666765 566799999999999999877 788888744433
No 150
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.29 E-value=6.7e-11 Score=106.46 Aligned_cols=149 Identities=17% Similarity=0.161 Sum_probs=136.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (355)
+|++..+..++.....+..++|+++.|++.||+|.|+++.++.++..+.++...+......+.++-.+.|...|+.+...
T Consensus 283 ~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~S 362 (438)
T COG2270 283 LGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASS 362 (438)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHH
Confidence 89999999999999999999999999999999999999999999999888877777777777788899999999999999
Q ss_pred HHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhcccc
Q 018453 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPAS 237 (355)
Q Consensus 169 ~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~es 237 (355)
-+|..+..|+++-++.+|++......++.+||.+-+.+.+..++-|..+....++.++.+++.+.+|+.
T Consensus 363 RSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 363 RSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 999999999999999999999999999999999999999888788988888888877777777777654
No 151
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.28 E-value=5.2e-11 Score=109.16 Aligned_cols=122 Identities=20% Similarity=0.254 Sum_probs=111.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHhhHHhH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPD-FIIMVVGRFVFGIGIGLAMHA 167 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~r~l~G~~~g~~~~~ 167 (355)
+|.+..+.+++.+...++.+++.++.+++.||+|||+.+..+..+.+++.++..+.++ .+.+++..++.|++.+...+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 321 (365)
T TIGR00900 242 LGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVP 321 (365)
T ss_pred hCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHH
Confidence 5888999999999999999999999999999999999998888888888777777664 888888999999999999999
Q ss_pred HHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 018453 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210 (355)
Q Consensus 168 ~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 210 (355)
...++.|..|+++|++..++.+....+|..+++.+.+.+.+..
T Consensus 322 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 322 QGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999987653
No 152
>PRK09669 putative symporter YagG; Provisional
Probab=99.27 E-value=4.6e-11 Score=113.13 Aligned_cols=148 Identities=18% Similarity=0.108 Sum_probs=107.4
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHH----hccH-HHHHHHHHHHHHHHHHHHhhhh------HHHHHHHHHHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI----LGRR-RELILAALLYLVGALVTALAPD------FIIMVVGRFVF 157 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr-~~~~~~~~l~~~~~~~~~~~~~------~~~~~~~r~l~ 157 (355)
+|++....|.+.++..+...+..++.|+++|| +||| +.++.+.+..++..++....++ ...+++..++.
T Consensus 40 ~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~ 119 (444)
T PRK09669 40 FGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILL 119 (444)
T ss_pred cCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHH
Confidence 89999999999999999999999999999998 7775 5555676666666655444432 34455566666
Q ss_pred HHHHhhHHhHHHHHHHhhc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc------ccchhHHHHhHHHHHHHHHHH
Q 018453 158 GIGIGLAMHAAPMYIAETA-PTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL------VAGWRYMYGASTPLAVIMGMG 230 (355)
Q Consensus 158 G~~~g~~~~~~~~~~~e~~-~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~------~~~w~~~~~~~~~~~~~~~~~ 230 (355)
+.+.........++..|+. ++++|++..++-..+..+|..+++.+...+... ..+|+..+.+.++++++..+.
T Consensus 120 ~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~ 199 (444)
T PRK09669 120 SLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFC 199 (444)
T ss_pred HHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 7776667777778889988 557899988888888888888777655443321 127888888777776665444
Q ss_pred Hh-hccc
Q 018453 231 MW-WLPA 236 (355)
Q Consensus 231 ~~-~~~e 236 (355)
.+ ..+|
T Consensus 200 ~~~~~~e 206 (444)
T PRK09669 200 CFFMTKE 206 (444)
T ss_pred HhCCeEE
Confidence 33 3444
No 153
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.27 E-value=7.3e-10 Score=102.80 Aligned_cols=218 Identities=16% Similarity=0.150 Sum_probs=140.6
Q ss_pred hcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHhhhh
Q 018453 68 IGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGR-RRELILAALLYLVGALVTALAPD 146 (355)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~~~~l~~~~~~~~~~~~~ 146 (355)
.+...+.++.+.++ .|.|..|+|.+.+...+..+++++++|.++||+++ |+.+.+..++.++..+.....++
T Consensus 18 ~G~~~p~~~~~L~~-------~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~ 90 (400)
T PF03825_consen 18 YGAFLPYLPLYLES-------RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSS 90 (400)
T ss_pred HHHHHHHHHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 33344556666665 69999999999999999999999999999999864 66666777777776767777788
Q ss_pred HHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHH-HHhhccc--cchhHHHHhHHHH
Q 018453 147 FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIG-SLLVDLV--AGWRYMYGASTPL 223 (355)
Q Consensus 147 ~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~-~~l~~~~--~~w~~~~~~~~~~ 223 (355)
++.+++..++..+......+...++..+... +++.-.|-.-.+.++|-+++.... ..+.... .+....+++.++.
T Consensus 91 f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 168 (400)
T PF03825_consen 91 FWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAIL 168 (400)
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHH
Confidence 8888888888888888888888888888765 234444555556666665554432 2222211 1233455666655
Q ss_pred HHHHHHHHhhcccchhHHHHhhccccCchhhhHHHHHHHHHHHhCCCCCCCchhHHHHHHHhhccccccccchhhhhhcc
Q 018453 224 AVIMGMGMWWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHG 303 (355)
Q Consensus 224 ~~~~~~~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (355)
.++.....+.+|+.|.. +. . .++.++....+..+++|+
T Consensus 169 ~~ll~~~~l~lp~~~~~---~~----~-----------------------------------~~~~~~~~~~~~~~llk~ 206 (400)
T PF03825_consen 169 SLLLAGFALFLPKTPPK---RS----A-----------------------------------KESVKKLLGLDALKLLKN 206 (400)
T ss_pred HHHHHHHHHhCCCCccc---cc----c-----------------------------------CCCcccccchHHHHHhcC
Confidence 55555555667877620 00 0 000012223345578888
Q ss_pred cchhHHHHHHHHHHHHhhhhhhHHHHhHHHHHHHhcc
Q 018453 304 KCLKALIIGAGLVLFQQITGQPSVLYYAASILQDFLQ 340 (355)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (355)
|.....++..++... ....+..|.+.++++.+.
T Consensus 207 ~~~~~Fll~~~l~~~----~~~~~~~f~~~yl~~~gg 239 (400)
T PF03825_consen 207 PRFLVFLLAAFLIGI----SHAAYYTFFSIYLQELGG 239 (400)
T ss_pred ccHHHHHHHHHHHHH----HHHHHHHHHHHHHHHccc
Confidence 766555554443333 245677888888998884
No 154
>PRK15075 citrate-proton symporter; Provisional
Probab=99.26 E-value=5.1e-10 Score=105.71 Aligned_cols=136 Identities=21% Similarity=0.140 Sum_probs=98.5
Q ss_pred cccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH-HHH---hhhh
Q 018453 71 TSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGAL-VTA---LAPD 146 (355)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~-~~~---~~~~ 146 (355)
.....|.+.++ .+|++..+.++......++.+++.++.|+++||+|||+.++.+.++..+..+ ... ..++
T Consensus 257 ~~~~~p~~l~~------~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (434)
T PRK15075 257 ITVYTPTFGKT------VLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPS 330 (434)
T ss_pred HHHHHHHHHHH------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 34445555442 1588888889988899999999999999999999999988776554433221 111 1233
Q ss_pred HHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHH-HHHHHHHHHHHHHHHhhccccch
Q 018453 147 FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEF-FIVLGMVGGYGIGSLLVDLVAGW 213 (355)
Q Consensus 147 ~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~-~~~~g~~~~~~i~~~l~~~~~~w 213 (355)
...+.+..++.|++.+...+....++.|.+|++.|+++.++... +..+++.++|.+.+.+.+.. |+
T Consensus 331 ~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~-g~ 397 (434)
T PRK15075 331 FARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVT-GD 397 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhc-CC
Confidence 44444555666777777777777889999999999999998644 44456788999999998876 54
No 155
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.26 E-value=5.8e-10 Score=102.19 Aligned_cols=182 Identities=13% Similarity=0.148 Sum_probs=141.6
Q ss_pred chHHHHHHHHH-HHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Q 018453 46 SVSAAILPFLF-PALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRR 124 (355)
Q Consensus 46 ~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr 124 (355)
+.++.|...+. ....++.+.+++. .......+-++ -+.+....|.+.+...+.-++.-.+.+++.+|+|.|
T Consensus 218 k~~~fw~~~l~v~g~~~~Y~vfdqq-f~~y~~~~f~~-------~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k 289 (412)
T PF01306_consen 218 KMRNFWFFVLFVIGVAAIYDVFDQQ-FPIYFASFFQS-------AGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAK 289 (412)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHTSSS-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcc-------cccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChH
Confidence 34455554333 3333455555554 33333333332 355677889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHH-HHHHHHHHHHHHHHHH
Q 018453 125 RELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISL-KEFFIVLGMVGGYGIG 203 (355)
Q Consensus 125 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~-~~~~~~~g~~~~~~i~ 203 (355)
+.++++.+++.+=.++++++++.+.+.+.+.+.|+..+........|+.+.+|++..++...+ .+....+|.++.+.++
T Consensus 290 ~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~ 369 (412)
T PF01306_consen 290 NLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLA 369 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 999999999999999999999999999999999999999999999999999999988888887 4899999999999999
Q ss_pred HHhhccccchhHHHHhHHHHHHHHHHHH-hhccc
Q 018453 204 SLLVDLVAGWRYMYGASTPLAVIMGMGM-WWLPA 236 (355)
Q Consensus 204 ~~l~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~e 236 (355)
|.+.++. |++.+|++.+.+.++..++. +.+++
T Consensus 370 G~lyd~~-G~~~tylimg~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 370 GYLYDRI-GFQHTYLIMGLIVLPFTLISAFTLKK 402 (412)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred HhhHhhc-CcHHHHHHHHHHHHHHHHHheeeecC
Confidence 9999998 99999998888877655544 44543
No 156
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.26 E-value=4.9e-10 Score=101.68 Aligned_cols=142 Identities=21% Similarity=0.256 Sum_probs=120.5
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHhhHHhH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-PDFIIMVVGRFVFGIGIGLAMHA 167 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~r~l~G~~~g~~~~~ 167 (355)
.|.+.+..+++..++.++..+|+.++|++.|| +.|+.+.....+.++..+...+. .+.+..++.-++.|+..+.....
T Consensus 242 ~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~ 320 (394)
T COG2814 242 AGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQG 320 (394)
T ss_pred cCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhH
Confidence 68899999999999999999999999999999 89998888878877777766654 45556666777788877766666
Q ss_pred HHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhh
Q 018453 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (355)
Q Consensus 168 ~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~ 233 (355)
....+.+ .-++.+..+.++.....++|..+|..+++.+.++. |+....++.+++.+++++..++
T Consensus 321 ~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~-g~~~~~~~~a~l~~~a~~~~~~ 384 (394)
T COG2814 321 LQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDAL-GYAATGWVGAALLLLALLLALL 384 (394)
T ss_pred HHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-chHHHHHHHHHHHHHHHHHHHH
Confidence 6666676 44588999999999999999999999999999996 9999999999998887776555
No 157
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.25 E-value=1.3e-10 Score=110.95 Aligned_cols=144 Identities=15% Similarity=-0.011 Sum_probs=102.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-------HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRR-------RELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGI 161 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr-------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 161 (355)
+|++..+.+.+.+++.++.+++.+++|+++||+||| ..+.+..++.++..++....++.+..++..++.+++.
T Consensus 283 ~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~ 362 (476)
T PLN00028 283 FGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFV 362 (476)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999875 2222333333333344444555555555566667766
Q ss_pred hhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhcc
Q 018453 162 GLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLP 235 (355)
Q Consensus 162 g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 235 (355)
+........++.+.. +++||...|+...+..+|+.+++.+.+ .+..++|+..|++.+++.+++.++.++++
T Consensus 363 ~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~--~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 363 QAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF--TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH--hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 555555555666655 468999999998877788877776643 22233799999999888888777666654
No 158
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.25 E-value=7.5e-10 Score=103.01 Aligned_cols=141 Identities=19% Similarity=0.044 Sum_probs=109.2
Q ss_pred ccCChhHHHHHHHHHH-HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHh------hhhHHHHHHHHHHHHHHH
Q 018453 89 YDLSSVEIGLITSGSL-YGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL------APDFIIMVVGRFVFGIGI 161 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~r~l~G~~~ 161 (355)
.|++.++.|++..... ++.+++.++.|++.||+|+|+.+.++.++.++..+.... .++...+.....+.+++.
T Consensus 238 ~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (390)
T TIGR02718 238 AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLIT 317 (390)
T ss_pred cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHH
Confidence 6999999999988776 466788899999999999999988877665333332221 123334444555666777
Q ss_pred hhHHhHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHH
Q 018453 162 GLAMHAAPMYIAETAPT-PMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMG 230 (355)
Q Consensus 162 g~~~~~~~~~~~e~~~~-~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~ 230 (355)
|...+.....+.+..++ +.+++.+++.+....+|..+||.+++.+.+.. ||+..|++.+++.+++.+.
T Consensus 318 g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~-G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 318 GITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRF-GYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccHHHHHHHHHHHHHHHHH
Confidence 77778888887777776 88999999999999999999999999999887 8999998887776665443
No 159
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.24 E-value=1.7e-10 Score=103.86 Aligned_cols=170 Identities=21% Similarity=0.133 Sum_probs=135.5
Q ss_pred HHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccHHHHHHH-H
Q 018453 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADIL--GRRRELILA-A 131 (355)
Q Consensus 55 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--Grr~~~~~~-~ 131 (355)
..+++++++.+.....+.-..|.+..+ ..|+|...+++..+.+-++.+.|.++.|+++||+ |||....+. +
T Consensus 255 W~la~a~vfvYivR~gi~dW~p~YL~e------~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~ 328 (448)
T COG2271 255 WLLALANVFVYVVRYGINDWGPLYLSE------VKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFM 328 (448)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHH------hcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHH
Confidence 455677777777887788888877763 2699999999999999999999999999999996 677655443 3
Q ss_pred HHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHH-HHHHHHHHHHHhhc
Q 018453 132 LLYLVGALVTALAP--DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVL-GMVGGYGIGSLLVD 208 (355)
Q Consensus 132 ~l~~~~~~~~~~~~--~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~-g~~~~~~i~~~l~~ 208 (355)
++..++.+..-.++ |+++..++.++.|+..-+..-.......|..|++--|++.|+...+.-+ |.+.+....+.+.+
T Consensus 329 ~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d 408 (448)
T COG2271 329 LLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIAD 408 (448)
T ss_pred HHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEe
Confidence 33344444444444 4588888999999988888888888899999999999999999888888 99999999999888
Q ss_pred cccchhHHHHhHHHHHHHHHHHH
Q 018453 209 LVAGWRYMYGASTPLAVIMGMGM 231 (355)
Q Consensus 209 ~~~~w~~~~~~~~~~~~~~~~~~ 231 (355)
.. ||...|++..+.++++.++.
T Consensus 409 ~~-gW~g~Fi~~~~~a~l~~lll 430 (448)
T COG2271 409 TW-GWDGGFIVLSIAALLAILLL 430 (448)
T ss_pred cC-CCcchHHHHHHHHHHHHHHH
Confidence 86 99999988777766655443
No 160
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.24 E-value=9.7e-11 Score=107.87 Aligned_cols=128 Identities=23% Similarity=0.231 Sum_probs=96.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-HHHHH-HHH-HHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHhh
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGR-RRELI-LAA-LLYLVGALVTAL--APDFIIMVVGRFVFGIGIGL 163 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-r~~~~-~~~-~l~~~~~~~~~~--~~~~~~~~~~r~l~G~~~g~ 163 (355)
+|.+..+.+++.+...++.+++.++.|++.||+++ |+... ... .+..++..+... ..+.....+..++.|+..+.
T Consensus 247 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 326 (379)
T TIGR00881 247 KGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYG 326 (379)
T ss_pred hCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhh
Confidence 68899999999999999999999999999998643 33222 211 122222222222 23445556667777876666
Q ss_pred HHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHH
Q 018453 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMY 217 (355)
Q Consensus 164 ~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~ 217 (355)
..+....+..|.+|+++|+++.++.+....+|..++|.+.+.+.+.. ||++.|
T Consensus 327 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~f 379 (379)
T TIGR00881 327 PQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGF-GWAGAF 379 (379)
T ss_pred hhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhh-cccccC
Confidence 66667788999999999999999999999999999999999999887 888653
No 161
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.23 E-value=1.8e-10 Score=106.01 Aligned_cols=146 Identities=21% Similarity=0.182 Sum_probs=129.7
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHhhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADIL-GRRRELILAALLYLVGALVTALAP--DFIIMVVGRFVFGIGIGLAM 165 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~r~l~G~~~g~~~ 165 (355)
+|++++++.-+.+++..-.-+..+++||++||+ |+|+.+..+.++..+|.++.+... +...++++.++.++|.|..=
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K 135 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFK 135 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcccccc
Confidence 678998888888888888888999999999996 999999999999999999999874 68889999999999999999
Q ss_pred hHHHHHHHhhcCCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhcc
Q 018453 166 HAAPMYIAETAPTPM--RGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLP 235 (355)
Q Consensus 166 ~~~~~~~~e~~~~~~--r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 235 (355)
+.....+.|.+|+++ |-.+.++++++.++|++++|++.+++.+.. ||...|.+.++-..+.++..+..+
T Consensus 136 ~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~-g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 136 PNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINY-GWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred ccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999999997644 777888999999999999999999999988 899999998888877777666554
No 162
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.22 E-value=1.6e-09 Score=96.23 Aligned_cols=149 Identities=20% Similarity=0.305 Sum_probs=111.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (355)
+|++..+++.+...-+...++...+.|.++||+|||+.-++-+++.+++++... .++++.++++|++.|++....+.+-
T Consensus 64 yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~-~~~~~~L~~GRvlgGiaTSLLfS~F 142 (354)
T PF05631_consen 64 YGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKH-SSNYPVLLLGRVLGGIATSLLFSAF 142 (354)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHh-ccccHHHHHHHHHHHHHHHHHHHHH
Confidence 799999999999999999999999999999999999999998999888886544 4889999999999999999998888
Q ss_pred HHHH-Hhh----cCCCchhHHHHHHH-HHHHHHHHHHHHHHHHhhcccc-chhHHHHhHHHHHHHHHHHHh-hcccch
Q 018453 169 PMYI-AET----APTPMRGQLISLKE-FFIVLGMVGGYGIGSLLVDLVA-GWRYMYGASTPLAVIMGMGMW-WLPASP 238 (355)
Q Consensus 169 ~~~~-~e~----~~~~~r~~~~~~~~-~~~~~g~~~~~~i~~~l~~~~~-~w~~~~~~~~~~~~~~~~~~~-~~~esp 238 (355)
-+++ .|. +|++..+...+... ..+++-.+.+..++..+.+..+ |-..+|....++.+++.++.. ..+|+.
T Consensus 143 EsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENy 220 (354)
T PF05631_consen 143 ESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENY 220 (354)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccC
Confidence 7754 444 24444444444343 3445555566666666665441 347888888777777655443 356653
No 163
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.22 E-value=1.5e-09 Score=98.43 Aligned_cols=158 Identities=18% Similarity=0.133 Sum_probs=123.9
Q ss_pred cchHHHHHHHHHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Q 018453 45 YSVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRR 124 (355)
Q Consensus 45 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr 124 (355)
+-.+++|+.++..++-.+..++.-...++....... +|| +....-|+..++++.++...+++-|+.|++|-|
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~-------~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR 109 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNS-------FYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLR 109 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHH-------Hhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchH
Confidence 445566776666666666666655444444333333 267 777888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhh------hHH--HHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHH
Q 018453 125 RELILAALLYLVGALVTALAP------DFI--IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGM 196 (355)
Q Consensus 125 ~~~~~~~~l~~~~~~~~~~~~------~~~--~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~ 196 (355)
..++++..+.+++..+-..+. .++ ....+..+.+.++-.....-.-...-|+|+++|..+..+-.+++.+|.
T Consensus 110 ~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGv 189 (480)
T KOG2563|consen 110 TALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGV 189 (480)
T ss_pred HHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHH
Confidence 999999999999999887652 234 666778888887766666656677788999999999999999999999
Q ss_pred HHHHHHHHHhhccc
Q 018453 197 VGGYGIGSLLVDLV 210 (355)
Q Consensus 197 ~~~~~i~~~l~~~~ 210 (355)
++|.++...++.+.
T Consensus 190 avg~llppilV~~~ 203 (480)
T KOG2563|consen 190 AVGFLLPPILVPSS 203 (480)
T ss_pred HHHhhccceecCCC
Confidence 99999998888543
No 164
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.20 E-value=4.9e-10 Score=106.60 Aligned_cols=169 Identities=14% Similarity=-0.024 Sum_probs=122.6
Q ss_pred HHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cHHHHHHHHHHH
Q 018453 60 GGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILG-----RRRELILAALLY 134 (355)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-----rr~~~~~~~~l~ 134 (355)
.++..|+. ......++.+..+ ++|++..+.+.+.+...+...+-.+ +|.++||++ ||+.++++.++.
T Consensus 34 ~y~~qGl~-~l~~~~~~~~l~~------~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~ 105 (468)
T TIGR00788 34 VLFVKGIA-GLMRLPLSPMLTD------DLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLG 105 (468)
T ss_pred HHHHhhHH-HHhhhhhhHHHHH------hcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHH
Confidence 34556666 4444444444442 2799999999999999999998666 999999997 777777777666
Q ss_pred H-HHHHHHHhhhhHH-HHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHH---HHHHHHHHHHHHHHHHHHhhcc
Q 018453 135 L-VGALVTALAPDFI-IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISL---KEFFIVLGMVGGYGIGSLLVDL 209 (355)
Q Consensus 135 ~-~~~~~~~~~~~~~-~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~---~~~~~~~g~~~~~~i~~~l~~~ 209 (355)
. +.....+..++.. ...+..++.+++.+...++.-.+..|..+ +++....+. ......+|.++|+.+++.+.+.
T Consensus 106 ~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~ 184 (468)
T TIGR00788 106 SAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDK 184 (468)
T ss_pred HHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3 3333333334433 33447889999999999999999999998 555443333 3444458999999999999887
Q ss_pred ccchhHHHHhHHHHHHHHHHHHhhcccch
Q 018453 210 VAGWRYMYGASTPLAVIMGMGMWWLPASP 238 (355)
Q Consensus 210 ~~~w~~~~~~~~~~~~~~~~~~~~~~esp 238 (355)
. +|+..|++.+++.++..+..++++|++
T Consensus 185 ~-~~~~~f~~~a~l~ll~~~~~~~~~E~~ 212 (468)
T TIGR00788 185 T-LTRILFLITAALLLLQLFVSNLSKERR 212 (468)
T ss_pred c-CcchHHHHHHHHHHHHHHHHHhccccc
Confidence 7 899999998888777766667778753
No 165
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.20 E-value=4.9e-11 Score=112.40 Aligned_cols=204 Identities=20% Similarity=0.232 Sum_probs=143.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHH----HhccHHHHH-HHHHHHHHHHHHHHhh-h-------hHHHHHHHHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIAD----ILGRRRELI-LAALLYLVGALVTALA-P-------DFIIMVVGRF 155 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~Grr~~~~-~~~~l~~~~~~~~~~~-~-------~~~~~~~~r~ 155 (355)
.|+++...|++..+.-+..++..++.|.++| |+|||+..+ ++.++.+++.++.... + ....+.+..+
T Consensus 32 ~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~ 111 (428)
T PF13347_consen 32 LGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYI 111 (428)
T ss_pred cCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHH
Confidence 6999999999999999999999999999999 899876555 5777777777777655 3 1223456667
Q ss_pred HHHHHHhhHHhHHHHHHHhhcC-CCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccc------chhHHHHhHHHHHHHHH
Q 018453 156 VFGIGIGLAMHAAPMYIAETAP-TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVA------GWRYMYGASTPLAVIMG 228 (355)
Q Consensus 156 l~G~~~g~~~~~~~~~~~e~~~-~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~------~w~~~~~~~~~~~~~~~ 228 (355)
+..++.........++..|+.+ +++|.+..+.-..+..+|.++...+.+.+.+..+ +|++..++.+++.++..
T Consensus 112 l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~ 191 (428)
T PF13347_consen 112 LFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFF 191 (428)
T ss_pred HHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHh
Confidence 7788888888888889999997 5789999999999999998777777766663222 69999888888877765
Q ss_pred HHH-hhcccchhHHHHhhccccCchhhhHHHHHHHHHHHhCCCCCCCchhHHHHHHHhhccccccccchhhhhhcccchh
Q 018453 229 MGM-WWLPASPRWLLLCAMKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLK 307 (355)
Q Consensus 229 ~~~-~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (355)
++. +..+|.++. .+.++++.+-....++++++|.++
T Consensus 192 ~i~~~~~ke~~~~-------------------------------------------~~~~~~~~~~~~~~~~~~~nr~~~ 228 (428)
T PF13347_consen 192 LITFFFVKERSVE-------------------------------------------VTEQEKKISLRDSLRSLFRNRPFR 228 (428)
T ss_pred hhhhheeeecccc-------------------------------------------ccccccccccccchhhhcccchHH
Confidence 544 445661100 000001223355678888888877
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHhHHHHH
Q 018453 308 ALIIGAGLVLFQQITGQPSVLYYAASIL 335 (355)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (355)
.++...++..+..........+|..+.+
T Consensus 229 ~l~~~~~~~~~~~~~~~~~~~y~~~~vl 256 (428)
T PF13347_consen 229 ILLLAFFLQWLAFALMNTFLPYYFTYVL 256 (428)
T ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHHHh
Confidence 7777666655554433334444444443
No 166
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.20 E-value=2.1e-10 Score=107.53 Aligned_cols=149 Identities=17% Similarity=0.091 Sum_probs=102.7
Q ss_pred cccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH-HHHHHHHHHHHHHHHHhhhhHHH
Q 018453 71 TSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRE-LILAALLYLVGALVTALAPDFII 149 (355)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~-~~~~~~l~~~~~~~~~~~~~~~~ 149 (355)
+...+|.+.++. ..+.+..+.+++.+...++..++.++.|+++||+++|+. .....++..++.++.....+...
T Consensus 261 ~~~~~p~~l~~~-----~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (412)
T TIGR02332 261 INIWTPQILQSF-----NQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLI 335 (412)
T ss_pred HHHHHHHHHHhc-----CCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 445566666530 135677888999999999999999999999999997764 33344444443333222223222
Q ss_pred HHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHH
Q 018453 150 MVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLA 224 (355)
Q Consensus 150 ~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~ 224 (355)
.+++-++.+++.....+.......|.+|+++|++++|+.+....+|.+++|.+.+.+.+..++|+..+++.+++.
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 336 QLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred HHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 222223333333333344445556788999999999999999999999999999999988767999988766543
No 167
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.19 E-value=2.6e-09 Score=99.56 Aligned_cols=138 Identities=15% Similarity=0.119 Sum_probs=110.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (355)
+|++..+.+++...+.++.+++.++.+++.||.+++..+....+......++....++.+.+.+..++.|++.+...+..
T Consensus 247 ~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~ 326 (394)
T PRK10213 247 AGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGW 326 (394)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHH
Confidence 68899999999999999999999999999999654443443333344444444555677778888899999999999999
Q ss_pred HHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHH
Q 018453 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMG 228 (355)
Q Consensus 169 ~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~ 228 (355)
..++.+..| +++++..++......+|..+|+.+++.+.+.. |++..++..+++.++..
T Consensus 327 ~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~-g~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 327 STWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNI-GLTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ChhhHHHHHHHHHHHHH
Confidence 989999887 55678888888899999999999999999886 88888888776655443
No 168
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.19 E-value=1.3e-09 Score=101.18 Aligned_cols=140 Identities=12% Similarity=0.127 Sum_probs=106.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHhhHHhH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL-APDFIIMVVGRFVFGIGIGLAMHA 167 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~r~l~G~~~g~~~~~ 167 (355)
+|.+..+.+++.+...++.+++.++.|++.||+|+|+.+..+..+.+++.++... .++.+..++..++.+++.++..+.
T Consensus 230 ~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 309 (382)
T PRK10091 230 SGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAP 309 (382)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHH
Confidence 6889999999999999999999999999999999999998888887877765543 445556666666777765544444
Q ss_pred HHH-HHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHH
Q 018453 168 APM-YIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMG 230 (355)
Q Consensus 168 ~~~-~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~ 230 (355)
... ...+..+++.++.. ..+....+|..+||.+++.+.+...+|+..+.+.++++++....
T Consensus 310 ~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 371 (382)
T PRK10091 310 LQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSS 371 (382)
T ss_pred HHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHH
Confidence 443 34444444545544 34677899999999999999986558999999887776665443
No 169
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.18 E-value=4.2e-10 Score=106.36 Aligned_cols=148 Identities=14% Similarity=0.125 Sum_probs=100.8
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH---HHHHHHHhh--hhHHHHHHHHHHHHHHHhh
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYL---VGALVTALA--PDFIIMVVGRFVFGIGIGL 163 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~---~~~~~~~~~--~~~~~~~~~r~l~G~~~g~ 163 (355)
+|.+..+.++....+.++.+++.++.|+++||+++++....+..+.. ++.++.... .+.+......++.|++...
T Consensus 282 ~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 361 (438)
T TIGR00712 282 KHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYG 361 (438)
T ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHcc
Confidence 58889999999999999999999999999999965432222322221 122221221 2334334444555554333
Q ss_pred HHhHHHHHHHhhcCCCchhHHHHHHHHHHHHH-HHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHH-hhcccc
Q 018453 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLG-MVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGM-WWLPAS 237 (355)
Q Consensus 164 ~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g-~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~es 237 (355)
..........|.+|++.||+++|+.+....+| .+++|.+.+.+.+.. ||...|++.+++++++.+.. +++||.
T Consensus 362 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (438)
T TIGR00712 362 PVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF-GWDGGFMVMIGGSILAVILLIVVMIGE 436 (438)
T ss_pred HHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 33333456789999999999999998887776 478999999999887 89999988777766655443 445553
No 170
>PRK09848 glucuronide transporter; Provisional
Probab=99.18 E-value=6.8e-09 Score=98.45 Aligned_cols=121 Identities=21% Similarity=0.252 Sum_probs=98.4
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHhhHHh
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP--DFIIMVVGRFVFGIGIGLAMH 166 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~r~l~G~~~g~~~~ 166 (355)
+|.+....++......++.+++.++.+++.||+|+|+.+.++.++.+++.++..+.+ +.+.+++..++.|+|.+...+
T Consensus 259 ~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~ 338 (448)
T PRK09848 259 LNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMT 338 (448)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHH
Confidence 566655555555555677888999999999999999999999988888877766643 566677778889999999999
Q ss_pred HHHHHHHhhcCCC-------chhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018453 167 AAPMYIAETAPTP-------MRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (355)
Q Consensus 167 ~~~~~~~e~~~~~-------~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 209 (355)
...+...|..+.+ ++|...++.+....+|..+|+.+.+.+.+.
T Consensus 339 ~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~ 388 (448)
T PRK09848 339 VMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGL 388 (448)
T ss_pred HHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888888887643 469999999999999999999999887643
No 171
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.18 E-value=1e-09 Score=115.87 Aligned_cols=138 Identities=21% Similarity=0.247 Sum_probs=117.8
Q ss_pred ccCChh-HHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhH
Q 018453 89 YDLSSV-EIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (355)
Q Consensus 89 ~~~s~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 167 (355)
+|++.. +.+++.+...++.+++.++.|++.||+++++.+.++.++.+++.++..+..+.+.++++.++.|++.+...+.
T Consensus 263 ~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 342 (1146)
T PRK08633 263 LGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVP 342 (1146)
T ss_pred hCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHH
Confidence 688888 9999999999999999999999999999999988888888888888887788888888899999999999899
Q ss_pred HHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHH
Q 018453 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (355)
Q Consensus 168 ~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~ 226 (355)
...++.+.+|++.||+++++.+....+|.++++.+++.+.....++...|++.+.++++
T Consensus 343 ~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 343 LNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888888776654222555666665555444
No 172
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.18 E-value=1.2e-09 Score=101.92 Aligned_cols=141 Identities=16% Similarity=0.093 Sum_probs=110.4
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHH
Q 018453 90 DLSSVEIGLITSGSLYGALIGSILAFNIAD-ILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (355)
Q Consensus 90 ~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (355)
+.++.+.+++.+...++..++..+.+++.| |++.++.+..+.++.+++.++.++.++++.+.+..++.|++.+...+..
T Consensus 239 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~ 318 (400)
T PRK11646 239 AGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPAR 318 (400)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccH
Confidence 346678888888877777666666666665 5676777778888888888777777888777778888999988888898
Q ss_pred HHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccc--c-hhHHHHhHHHHHHHHHHH
Q 018453 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVA--G-WRYMYGASTPLAVIMGMG 230 (355)
Q Consensus 169 ~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~--~-w~~~~~~~~~~~~~~~~~ 230 (355)
..++.+..|+++||+.+++.+....+|..+||.+++.+.+..+ + ....+++.++++++..+.
T Consensus 319 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 319 ETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999987642 2 345555555555555444
No 173
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.15 E-value=6.2e-10 Score=106.07 Aligned_cols=159 Identities=13% Similarity=0.040 Sum_probs=106.0
Q ss_pred cccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH--------HHHHHHHH--HHHH
Q 018453 69 GSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRE--------LILAALLY--LVGA 138 (355)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~--------~~~~~~l~--~~~~ 138 (355)
......+|.+..+ .+|.+..+.+++.++..++..++.++.|+++||+++|+. +..+..+. .+..
T Consensus 278 ~~~~~~lp~~l~~------~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (465)
T TIGR00894 278 TILPTYLPTFISW------VLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFA 351 (465)
T ss_pred HHHHHHHHHHHHH------HhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 3344456666542 268899999999999999999999999999999865421 11111111 1111
Q ss_pred HHHHh-hhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc--cchhH
Q 018453 139 LVTAL-APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV--AGWRY 215 (355)
Q Consensus 139 ~~~~~-~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~--~~w~~ 215 (355)
+.... ..+....+++-.+.+.+.+...+.......|..|+ .+|...++.+....+|+.++|.+.+.+.+.. ++|+.
T Consensus 352 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~ 430 (465)
T TIGR00894 352 YALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLI 430 (465)
T ss_pred HHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHH
Confidence 11122 22334444444555555554445444555676665 8999999999999999999999999887643 36899
Q ss_pred HHHhHHHHHHHHHHHHhhc
Q 018453 216 MYGASTPLAVIMGMGMWWL 234 (355)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~ 234 (355)
.|++.+++.++..+...++
T Consensus 431 ~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 431 VFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred HHHHHHHHHHHHHHHeeee
Confidence 9999888877776655444
No 174
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.15 E-value=1.9e-10 Score=101.40 Aligned_cols=133 Identities=17% Similarity=0.181 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchh
Q 018453 103 SLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRG 182 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~ 182 (355)
..+.-..|.++.+++.||+|||+.+....++.++..++...+.+.....+..+..-++..+.+.+.++|..|.+|.+-|+
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRa 469 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRA 469 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhh
Confidence 34566788999999999999999999999999999998887765444444444444555556677788999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhcccch
Q 018453 183 QLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPASP 238 (355)
Q Consensus 183 ~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~esp 238 (355)
++.|.......+|+++.|.++.. .+. +-..+..+.+.+++++.+...++|-.+
T Consensus 470 tgvGtcSsmaRIggI~~p~iA~~-~e~--s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 470 TGVGTCSSMARIGGIFSPVIAMR-AEL--STSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred cchhhhhhHHhhhhhhhhHHHHH-hcc--ceeehHHHHHHHHHHHHHHheeeeecc
Confidence 99999999999999999999932 222 334555666777777777777777433
No 175
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.14 E-value=8.7e-09 Score=95.67 Aligned_cols=148 Identities=22% Similarity=0.276 Sum_probs=116.5
Q ss_pred cc-CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh-hhHHHHH----HHHHHHHHHHh
Q 018453 89 YD-LSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-PDFIIMV----VGRFVFGIGIG 162 (355)
Q Consensus 89 ~~-~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~-~~~~~~~----~~r~l~G~~~g 162 (355)
.| .+....+.+.++..++-++.-...+++..|+|.|+.+.++.+..++=..+.+.. ++.+... ....+.|++.|
T Consensus 237 ~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~ 316 (400)
T PF03825_consen 237 LGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFG 316 (400)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHH
Confidence 45 667777877788788888898999999999999999999999999998888877 5544433 33457999999
Q ss_pred hHHhHHHHHHHhhcCCCchhHHHHHHHH-HHHHHHHHHHHHHHHhhcccc-----chhHHHHhHHHHHHHHHHHH-hhcc
Q 018453 163 LAMHAAPMYIAETAPTPMRGQLISLKEF-FIVLGMVGGYGIGSLLVDLVA-----GWRYMYGASTPLAVIMGMGM-WWLP 235 (355)
Q Consensus 163 ~~~~~~~~~~~e~~~~~~r~~~~~~~~~-~~~~g~~~~~~i~~~l~~~~~-----~w~~~~~~~~~~~~~~~~~~-~~~~ 235 (355)
........|+.+.+|++.|+++.+++.. ..++|..+|..++|++.+..+ .|...+.+.+++.++..+++ ++.+
T Consensus 317 ~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk 396 (400)
T PF03825_consen 317 LFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFK 396 (400)
T ss_pred HHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999865 579999999999999998652 24445555555555444333 3344
Q ss_pred c
Q 018453 236 A 236 (355)
Q Consensus 236 e 236 (355)
|
T Consensus 397 ~ 397 (400)
T PF03825_consen 397 P 397 (400)
T ss_pred C
Confidence 4
No 176
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.14 E-value=1.7e-09 Score=99.27 Aligned_cols=125 Identities=20% Similarity=0.173 Sum_probs=100.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADIL-GRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 167 (355)
.|.+..+.+.+.+...++.++++++.|++.||+ +||+.+.++.++.+++.++..+..+..... ..++.|++.|...+.
T Consensus 227 ~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~g~~~~~ 305 (355)
T TIGR00896 227 HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQGGAFPL 305 (355)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhhhhHhHH
Confidence 688899999999999999999999999999999 566677777777777776666654433222 456789999888888
Q ss_pred HHHHHHhhcC-CCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchh
Q 018453 168 APMYIAETAP-TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWR 214 (355)
Q Consensus 168 ~~~~~~e~~~-~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~ 214 (355)
....+.+..+ +++++...++.+....+|..++|.+.+.+.+..++|.
T Consensus 306 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 306 ALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred HHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 7777665554 5667899999999999999999999999998775554
No 177
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.14 E-value=1.9e-09 Score=100.79 Aligned_cols=148 Identities=18% Similarity=0.144 Sum_probs=114.0
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhh---hHH------HHHHHHHHHHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP---DFI------IMVVGRFVFGI 159 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~---~~~------~~~~~r~l~G~ 159 (355)
-|++..++.++.....+...+..+++.++.||+|||+.++.+..++.+..++..... +.. ..+++.++..+
T Consensus 300 aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~ 379 (485)
T KOG0569|consen 300 AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFII 379 (485)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 588999999999999999999999999999999999999999999888877665532 111 12344444444
Q ss_pred HHhh-HHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHH-HHhhcccc
Q 018453 160 GIGL-AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM-GMWWLPAS 237 (355)
Q Consensus 160 ~~g~-~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~es 237 (355)
+.+. ..|+..-+.+|++|++.|..++++....+.++.++-...-..+.+..++ +.|++..+++++..+ .+..+|||
T Consensus 380 ~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~--~~filF~i~~~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 380 SFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP--YVFILFVIPLAIFLIYLYRYLPET 457 (485)
T ss_pred hhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--hhhHHHHHHHHHHHHHHHHhCccc
Confidence 3333 3577788899999999999999999999888888877777777666633 677777777666554 55669998
Q ss_pred h
Q 018453 238 P 238 (355)
Q Consensus 238 p 238 (355)
.
T Consensus 458 k 458 (485)
T KOG0569|consen 458 K 458 (485)
T ss_pred C
Confidence 4
No 178
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.14 E-value=7.9e-10 Score=116.69 Aligned_cols=138 Identities=19% Similarity=0.063 Sum_probs=113.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh--------------------hhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA--------------------PDFI 148 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~--------------------~~~~ 148 (355)
+|.+..+.|++.+.+.+|.++++++.|+++++.++++.+..+.++.+++.+...+. .+.+
T Consensus 256 ~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (1140)
T PRK06814 256 LGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGW 335 (1140)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccH
Confidence 68899999999999999999999999999988887776666665555555444432 5677
Q ss_pred HHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHH
Q 018453 149 IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (355)
Q Consensus 149 ~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~ 226 (355)
.++++.++.|++.+...+...+++.+.+|++.||+++|+.++...+|..+++++.+.+.....++...+++.+++.++
T Consensus 336 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~ 413 (1140)
T PRK06814 336 RILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALANLI 413 (1140)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 778888999999999999999999999999999999999999999999999999998875434677776665554443
No 179
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.14 E-value=5.2e-09 Score=97.86 Aligned_cols=136 Identities=17% Similarity=0.163 Sum_probs=107.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHHHHHhh
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-----PDFIIMVVGRFVFGIGIGL 163 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~r~l~G~~~g~ 163 (355)
+|+++.+.++......++.+++.++.|++.||+|+|+.+.++.++..++.++..+. .+.+.+++..++.|++.+.
T Consensus 246 ~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~ 325 (406)
T PRK15402 246 EQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGL 325 (406)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHH
Confidence 68889999998888888999999999999999999999988888777777666543 2456667788899999888
Q ss_pred HHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHH
Q 018453 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (355)
Q Consensus 164 ~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~ 226 (355)
..+........ .++++||+..++.+....+|..+|+.+.+.+.+.. ++....+..++..++
T Consensus 326 ~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~~~~~~~~~~ 386 (406)
T PRK15402 326 ANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGG-GNGLFNLFNLANGLL 386 (406)
T ss_pred HhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhcccCC-chHHHHHHHHHHHHH
Confidence 77766665543 44589999999999999999999999999988776 555444444433333
No 180
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.13 E-value=5.1e-09 Score=97.85 Aligned_cols=140 Identities=19% Similarity=0.194 Sum_probs=101.0
Q ss_pred ccCChhHHHHHHHHHH-HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH---Hhh-hhHHHHHHHHH----HHHH
Q 018453 89 YDLSSVEIGLITSGSL-YGALIGSILAFNIADILGRRRELILAALLYLVGALVT---ALA-PDFIIMVVGRF----VFGI 159 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~---~~~-~~~~~~~~~r~----l~G~ 159 (355)
+|++..+.+++.+... ++.+++.++.|++.||+|+|+.+.++.++.++..+.. ++. ++.+.+++.-+ ..|+
T Consensus 240 ~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 319 (402)
T PRK11902 240 AGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGM 319 (402)
T ss_pred cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 6899999999886654 5689999999999999999998877776665554333 333 35555555543 4455
Q ss_pred HHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhh
Q 018453 160 GIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (355)
Q Consensus 160 ~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~ 233 (355)
+.+...+....++.+..|.+ ..++.+...++|..+++.+++.+.+.. ||+..|.+.++++++++++.+.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~G~l~~~~-G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 320 GTAAFVALLMALCNRSFSAT----QYALLSALASVGRVYVGPTSGYLVEAY-GWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHHHHHHHHhcCCCCcHH----HHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHH
Confidence 55555666666666666644 456666667788887778899999887 9999999988888777655433
No 181
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.12 E-value=1.6e-08 Score=96.58 Aligned_cols=118 Identities=16% Similarity=0.120 Sum_probs=94.9
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHh-----hhhHHHHHHHHHHHHHHHhhHHh
Q 018453 92 SSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL-----APDFIIMVVGRFVFGIGIGLAMH 166 (355)
Q Consensus 92 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~r~l~G~~~g~~~~ 166 (355)
+....+++.+...++.+++.++.+++.||+|+|+.+.++.++.+++.+...+ ..+.+.+++.-++.|++.+...+
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~ 343 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWV 343 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 4556677777777899999999999999999999998888776666554432 24566677777889999999999
Q ss_pred HHHHHHHhhcC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018453 167 AAPMYIAETAP-------TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (355)
Q Consensus 167 ~~~~~~~e~~~-------~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 209 (355)
...++++|..+ ++..|...++......+|..+++.+.+.+.+.
T Consensus 344 ~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~ 393 (473)
T PRK10429 344 LQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGL 393 (473)
T ss_pred HHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98999999855 44456688999999999999999999988753
No 182
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.09 E-value=8.7e-10 Score=105.26 Aligned_cols=149 Identities=13% Similarity=0.090 Sum_probs=105.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHH----Hhcc-HHHHHHHHHHHHHHHHHHHhhhh------HHHHHHHHHHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIAD----ILGR-RRELILAALLYLVGALVTALAPD------FIIMVVGRFVF 157 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~Gr-r~~~~~~~~l~~~~~~~~~~~~~------~~~~~~~r~l~ 157 (355)
+|++....|.+..+.-+..++..++.|.++| |+|| |+.++++.+..+++.++....++ +..+++..++.
T Consensus 37 ~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~ 116 (473)
T PRK10429 37 VGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILW 116 (473)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHH
Confidence 6999999999999999999999999999999 6699 55666677777777655543221 23344556677
Q ss_pred HHHHhhHHhHHHHHHHhhc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc------ccchhHHHHhHHHHHHHHHHH
Q 018453 158 GIGIGLAMHAAPMYIAETA-PTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL------VAGWRYMYGASTPLAVIMGMG 230 (355)
Q Consensus 158 G~~~g~~~~~~~~~~~e~~-~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~------~~~w~~~~~~~~~~~~~~~~~ 230 (355)
+++.....+...++..|+. ++++|.+..++-..+..+|+.+.+.+...+... ..+|+...++.+++.++..+.
T Consensus 117 ~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~ 196 (473)
T PRK10429 117 GMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTII 196 (473)
T ss_pred HHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 7777778888888999998 588999999987777777766665554433211 115677666666665554433
Q ss_pred H-hhcccc
Q 018453 231 M-WWLPAS 237 (355)
Q Consensus 231 ~-~~~~es 237 (355)
. +..+|.
T Consensus 197 ~~~~~~e~ 204 (473)
T PRK10429 197 TLRNVHEV 204 (473)
T ss_pred HHcCceec
Confidence 3 335553
No 183
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.07 E-value=1.1e-08 Score=95.40 Aligned_cols=132 Identities=17% Similarity=0.106 Sum_probs=104.9
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (355)
+|.++.+.|++.+...++.++++++.+++.||+++|+.+..+.. .++..++..+.++++...+..++.|++.+...+..
T Consensus 236 lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~ 314 (393)
T PRK11195 236 LGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGGFFVVPM 314 (393)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhH
Confidence 68899999999999999999999999999999999988777753 34444445556677777778889999988888888
Q ss_pred HHHHHhhcCCCc-hhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHH
Q 018453 169 PMYIAETAPTPM-RGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPL 223 (355)
Q Consensus 169 ~~~~~e~~~~~~-r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~ 223 (355)
.+.+.+..|++. +|++.++.+....+|..++..+.+.+... |-+..+++.+..
T Consensus 315 ~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 368 (393)
T PRK11195 315 NALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKL--GVPVVAVIVGFG 368 (393)
T ss_pred HHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHc--CCCHHHHHHHHH
Confidence 888888766654 79999999999999999999998866433 445554443333
No 184
>PRK11462 putative transporter; Provisional
Probab=99.07 E-value=6.4e-09 Score=98.83 Aligned_cols=143 Identities=15% Similarity=0.061 Sum_probs=108.0
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHH----hccHHHHH-HHHHHHHHHHHHHHhhhh------HHHHHHHHHHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI----LGRRRELI-LAALLYLVGALVTALAPD------FIIMVVGRFVF 157 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr~~~~-~~~~l~~~~~~~~~~~~~------~~~~~~~r~l~ 157 (355)
+|+++...|.+..+.-+.-++..++.|.++|| +|||+..+ ++.+..+++.++....++ ...+++...+.
T Consensus 40 ~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~ 119 (460)
T PRK11462 40 FGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLL 119 (460)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHH
Confidence 79999999999999999999999999999996 68865554 566777777665544442 23345566677
Q ss_pred HHHHhhHHhHHHHHHHhhcC-CCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc------cchhHHHHhHHHHHHHHHHH
Q 018453 158 GIGIGLAMHAAPMYIAETAP-TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV------AGWRYMYGASTPLAVIMGMG 230 (355)
Q Consensus 158 G~~~g~~~~~~~~~~~e~~~-~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~------~~w~~~~~~~~~~~~~~~~~ 230 (355)
.++.......-.++..|..+ +++|++..++-..+..+|..+++.+...+.... .+|+....+.+++.+++.++
T Consensus 120 ~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i 199 (460)
T PRK11462 120 TLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAF 199 (460)
T ss_pred HHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 88888888888889999986 788999999999999999888877765554322 25777777666665555443
Q ss_pred H
Q 018453 231 M 231 (355)
Q Consensus 231 ~ 231 (355)
.
T Consensus 200 ~ 200 (460)
T PRK11462 200 C 200 (460)
T ss_pred H
Confidence 3
No 185
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.07 E-value=6.8e-09 Score=89.20 Aligned_cols=160 Identities=20% Similarity=0.159 Sum_probs=122.6
Q ss_pred cccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh----
Q 018453 69 GSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA---- 144 (355)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~---- 144 (355)
...+..-|.+.+. +|+|.++...+.+.-.+|..+| ++.|.+.|++|++.+++++.+...++..+...+
T Consensus 19 Y~Fs~yS~~Lk~~-------l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~ 90 (250)
T PF06813_consen 19 YTFSAYSPQLKSR-------LGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGR 90 (250)
T ss_pred cchhhhhHHHHHH-------hCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 3445556666665 8999999999999999999874 888999999999999999999999988877553
Q ss_pred ---hhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHH
Q 018453 145 ---PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGAST 221 (355)
Q Consensus 145 ---~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~ 221 (355)
.++|.+.+..++.|.+.+...+.......+.+| ++||++.|+.-...++++.+-..+...+.+.. .-...+.+..
T Consensus 91 i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~-~~~fll~la~ 168 (250)
T PF06813_consen 91 IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDD-PSSFLLFLAV 168 (250)
T ss_pred cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCC-hHHHHHHHHH
Confidence 246777777788888777777777777778898 57999999999999999988888877776553 3444444444
Q ss_pred HHHHHHHHHHhhcccch
Q 018453 222 PLAVIMGMGMWWLPASP 238 (355)
Q Consensus 222 ~~~~~~~~~~~~~~esp 238 (355)
.+.++.++..++++..|
T Consensus 169 ~~~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 169 LPAVVCLVAMFFVRPVP 185 (250)
T ss_pred HHHHHHHHHhhheeccC
Confidence 45555555555655443
No 186
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.07 E-value=3.6e-09 Score=101.21 Aligned_cols=121 Identities=19% Similarity=0.265 Sum_probs=106.5
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHh----hhhHHHHHHHHHHHHHHHhhH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL----APDFIIMVVGRFVFGIGIGLA 164 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~r~l~G~~~g~~ 164 (355)
+|.+..+.+++.....++..++.++.|++.||+|||+.+.++.++.+++..+..+ ..+.+.+....++.|++.+..
T Consensus 286 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~ 365 (485)
T TIGR00711 286 LGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCF 365 (485)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 6889999999999999999999999999999999999999998888888877662 134566677788999999988
Q ss_pred HhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018453 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (355)
Q Consensus 165 ~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 209 (355)
.+.......+..|+++|+.+.++.+....+|+.+|+.+.+.+.++
T Consensus 366 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 366 FMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888788888889999999999999999999999999999988654
No 187
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.07 E-value=1.2e-08 Score=94.49 Aligned_cols=127 Identities=19% Similarity=0.333 Sum_probs=96.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHHHHHhh
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-----PDFIIMVVGRFVFGIGIGL 163 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~r~l~G~~~g~ 163 (355)
+|.++.+.+++.+...++.+++.++.|++.||+|+|+.+..+.++..++.++..+. .+...++...++.|++.+.
T Consensus 237 ~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (385)
T TIGR00710 237 MGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSM 316 (385)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 68899999999999999999999999999999999999888887777776655543 2344555667788999998
Q ss_pred HHhHHHHHHHhhcCCCchhHHHHHHHHHHHH-HHHHHHHHHHHhhccccchhHHHH
Q 018453 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVL-GMVGGYGIGSLLVDLVAGWRYMYG 218 (355)
Q Consensus 164 ~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~-g~~~~~~i~~~l~~~~~~w~~~~~ 218 (355)
..+....+..|..| ++|+++.++.+..... |.+.++.++ .+.+.. +|...+.
T Consensus 317 ~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~-~~~~~~-~~~~~~~ 369 (385)
T TIGR00710 317 ISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS-LIHGNT-AWPMSLS 369 (385)
T ss_pred HHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH-hccccC-hHHHHHH
Confidence 88888888888876 6789999998766654 555555544 443332 4444333
No 188
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.04 E-value=1.1e-08 Score=94.28 Aligned_cols=151 Identities=19% Similarity=0.077 Sum_probs=100.7
Q ss_pred ccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---HHHHHH-HHHHHHHHHHHHHhhhhH
Q 018453 72 SCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGR---RRELIL-AALLYLVGALVTALAPDF 147 (355)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr---r~~~~~-~~~l~~~~~~~~~~~~~~ 147 (355)
...+|.+.++ .|++.. .+...++..++..++ .++++||..| |+.... ..++.++...+.++..+.
T Consensus 212 ~~wlp~~L~~-------~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~ 280 (368)
T TIGR00903 212 AIWLEAALRP-------AGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNR 280 (368)
T ss_pred HHHHHHHHHH-------CCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 3467777664 466654 556555555555554 4677777654 333232 333334444444444444
Q ss_pred HHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHH
Q 018453 148 IIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIM 227 (355)
Q Consensus 148 ~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~ 227 (355)
...++.-++.|++.....+....+..|.+|++.||+++|+.+....+|++++|++.+.+.. +.+..|.+.+++.+++
T Consensus 281 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~---~~~~~f~~~~~~~~i~ 357 (368)
T TIGR00903 281 LALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS---SAEAYFTFLAILITIA 357 (368)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHH
Confidence 4445555667777777777788899999999999999999999999999999999987773 6677777777777766
Q ss_pred HHHHhhccc
Q 018453 228 GMGMWWLPA 236 (355)
Q Consensus 228 ~~~~~~~~e 236 (355)
.+..+++++
T Consensus 358 ~~~~~~~~~ 366 (368)
T TIGR00903 358 FAIALLLPN 366 (368)
T ss_pred HHHHHhCCC
Confidence 555444443
No 189
>PRK10133 L-fucose transporter; Provisional
Probab=99.04 E-value=1.5e-08 Score=95.76 Aligned_cols=136 Identities=10% Similarity=-0.014 Sum_probs=109.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (355)
+|.++.+.++....+.++.++++++.+++.||+|+|+++..+.++.+++.++..+.++.. .+..-++.|++.+..+|..
T Consensus 290 ~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~P~~ 368 (438)
T PRK10133 290 PGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQYPTI 368 (438)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHHHHH
Confidence 699999999999999999999999999999999999999888888777776666655542 2456678999999999999
Q ss_pred HHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccc-hhHHHHhHHHHHHHHH
Q 018453 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAG-WRYMYGASTPLAVIMG 228 (355)
Q Consensus 169 ~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~-w~~~~~~~~~~~~~~~ 228 (355)
.....+..|+ +.+.+.++..+ ..+|+.++|.+.+.+.+.. | -+..|++..+..+...
T Consensus 369 ~s~a~~~~~~-~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~-g~~~~~~~v~~~~~~~~~ 426 (438)
T PRK10133 369 FSLGIKNLGQ-DTKYGSSFIVM-TIIGGGIVTPVMGFVSDAA-GNIPTAELIPALCFAVIF 426 (438)
T ss_pred HHHHHcccch-hhccchhHHhH-HhccchHHHHHHHHHHHhc-cchHHHHHHHHHHHHHHH
Confidence 9999998875 45777777754 4468888989999888876 5 7788876555544433
No 190
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.03 E-value=8.9e-08 Score=87.54 Aligned_cols=239 Identities=16% Similarity=0.145 Sum_probs=161.3
Q ss_pred cccCChhHHH-HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHh
Q 018453 88 WYDLSSVEIG-LITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMH 166 (355)
Q Consensus 88 ~~~~s~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~ 166 (355)
|.|++..+.. -+.-+..-.+++..++...++|..|.|++++++.+..++..++..+.++...+-+..++.|++.+. ..
T Consensus 34 ~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~-ev 112 (412)
T PF01770_consen 34 DKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAA-EV 112 (412)
T ss_pred ccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHH-HH
Confidence 3688776654 455566667788888999999999999999999999999999999999999999999999998885 67
Q ss_pred HHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhc-cccchhHHHHhHHHHHHHHHHHHhhcccchhHHHHhh
Q 018453 167 AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD-LVAGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCA 245 (355)
Q Consensus 167 ~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~-~~~~w~~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~ 245 (355)
+-.+|+.-..|+++.-++.+....+.-+|.+++..++..++. ...+++...++......++++..+++|..++-..-++
T Consensus 113 ay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~S~~f~r 192 (412)
T PF01770_consen 113 AYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPKRSLFFHR 192 (412)
T ss_pred HHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCcccceec
Confidence 778888888999999999999999999999999999888775 2236777777777777777777788887554332221
Q ss_pred ccccCchhhhHHHHHHHHHHHhCCCCCCCchhHHHHHHHhhccccccccchhhhhhcc---cchhHHHHHHHHHHHHhhh
Q 018453 246 MKRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHG---KCLKALIIGAGLVLFQQIT 322 (355)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 322 (355)
+.+..+ + ..+...+..++..+.. ++..++.+......+..++.++++ -...+.++...++|....+
T Consensus 193 ~~~~~~------~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atc 261 (412)
T PF01770_consen 193 KPPAEQ------D----ANESESDKMNESPESS-SSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATC 261 (412)
T ss_pred cCcccc------c----cccccccccccccccc-cccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHh
Confidence 110000 0 0000000000000000 000000000011112222222222 2334666777888999999
Q ss_pred hhhHHHHhHHHHHHHh
Q 018453 323 GQPSVLYYAASILQDF 338 (355)
Q Consensus 323 ~~~~~~~~~~~~~~~~ 338 (355)
|.+-+..|...+.++.
T Consensus 262 gy~qv~nYvQ~LW~~v 277 (412)
T PF01770_consen 262 GYYQVINYVQSLWDTV 277 (412)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999999888
No 191
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.03 E-value=6.8e-09 Score=99.72 Aligned_cols=120 Identities=18% Similarity=0.092 Sum_probs=106.0
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHhhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA---PDFIIMVVGRFVFGIGIGLAM 165 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~r~l~G~~~g~~~ 165 (355)
+|.++.+.|+......++..++.++.|++.||+|+|+.+..+.++..++.++.... ++.+......++.|++.|...
T Consensus 290 ~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~ 369 (495)
T PRK14995 290 HGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASAL 369 (495)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHH
Confidence 58899999999999999999999999999999999999888888887777655432 355566678899999999998
Q ss_pred hHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 018453 166 HAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (355)
Q Consensus 166 ~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 208 (355)
+.....+.+..|+++++.+.++.+....+|..+|+.+.+.+.+
T Consensus 370 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 370 LASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888889999999999999999999999999999999998764
No 192
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.03 E-value=9.6e-09 Score=94.28 Aligned_cols=141 Identities=17% Similarity=0.232 Sum_probs=91.5
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH--H-HHHHHHHhh----hhHH-HHHHHHHHHHHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLY--L-VGALVTALA----PDFI-IMVVGRFVFGIG 160 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~--~-~~~~~~~~~----~~~~-~~~~~r~l~G~~ 160 (355)
.|++.++.|.+.++..+..++.+++.|.++||.|.||.++....+. . ...+...+. .|.+ ..+++-+..|++
T Consensus 38 ~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~ 117 (412)
T PF01306_consen 38 AGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLV 117 (412)
T ss_dssp H---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTT
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5999999999999999999999999999999999776655433222 1 222222222 2322 233334445555
Q ss_pred HhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhh
Q 018453 161 IGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (355)
Q Consensus 161 ~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~ 233 (355)
.....++.-+++.++. ++.+.=.|-.-++.++|-+++..++|.+.+. +....||+..+..++..++.++
T Consensus 118 f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i--~p~~~fwi~s~~~~il~lll~~ 186 (412)
T PF01306_consen 118 FNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNI--NPNIIFWIASAAAIILLLLLLL 186 (412)
T ss_dssp TTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHS
T ss_pred HcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeee--CccHHHHHHHHHHHHHHHHHHH
Confidence 5566677676665554 3345556667888999999999999988864 5678888776665554444333
No 193
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.02 E-value=6e-09 Score=95.63 Aligned_cols=105 Identities=15% Similarity=0.191 Sum_probs=89.3
Q ss_pred ccCChhHHHHHHHHHH-HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh-----------hhHHHHHHHHHH
Q 018453 89 YDLSSVEIGLITSGSL-YGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-----------PDFIIMVVGRFV 156 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~-----------~~~~~~~~~r~l 156 (355)
+|++..+.+.+.++.. ++.+++.+++|++.||+|||+.+..+.++.+++..+..+. ++.+.+..+.++
T Consensus 239 ~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 318 (356)
T TIGR00901 239 MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITL 318 (356)
T ss_pred cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHH
Confidence 6889999998887665 6788999999999999999999888888877776655443 345677788899
Q ss_pred HHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHH
Q 018453 157 FGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIV 193 (355)
Q Consensus 157 ~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~ 193 (355)
.+++.+...+....++.|.+|+++||+.+++.+...+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 319 EAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 9999999999999999999999999999999887654
No 194
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.00 E-value=2.2e-09 Score=96.78 Aligned_cols=150 Identities=17% Similarity=0.098 Sum_probs=118.1
Q ss_pred cccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhh-------
Q 018453 73 CATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP------- 145 (355)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~------- 145 (355)
..+|.+..+ .|+++..+.|.+...+.+...+..+.+|+++||+|.++++.+....++++..+..+..
T Consensus 239 ~~l~~~~~~------~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~ 312 (417)
T COG2223 239 AYLPMYLVT------QFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGG 312 (417)
T ss_pred HHHHHHHHH------hcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCc
Confidence 345655553 2899999999999999999999999999999999999999999988888888777653
Q ss_pred hHHH----HHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHH
Q 018453 146 DFII----MVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGAST 221 (355)
Q Consensus 146 ~~~~----~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~ 221 (355)
+... ++...++.|+|.|..+ ..+..++|+ +-|...|+.....++|+++-|..-+...+..+++...|++..
T Consensus 313 ~~~~~~~~~l~l~~~~G~GnGsvf----k~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~ 387 (417)
T COG2223 313 SFVVFVAVFLALFVFAGLGNGSVF----KMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLL 387 (417)
T ss_pred chHHHHHHHHHHHHHhccCcchhe----eechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHH
Confidence 3333 3444555555555554 445555543 679999999999999999999999999988867999999988
Q ss_pred HHHHHHHHHHhh
Q 018453 222 PLAVIMGMGMWW 233 (355)
Q Consensus 222 ~~~~~~~~~~~~ 233 (355)
.+.+++.+..+.
T Consensus 388 ~~~~~a~v~~~~ 399 (417)
T COG2223 388 AFYLVALVLTWA 399 (417)
T ss_pred HHHHHHHHHHHH
Confidence 888877765544
No 195
>PRK09669 putative symporter YagG; Provisional
Probab=99.00 E-value=1.1e-07 Score=90.23 Aligned_cols=117 Identities=14% Similarity=0.202 Sum_probs=91.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHhhHHhHHHHH
Q 018453 94 VEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL--APDFIIMVVGRFVFGIGIGLAMHAAPMY 171 (355)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~r~l~G~~~g~~~~~~~~~ 171 (355)
...+.+.....++.+++.+++++++||+|+|+.+.++.++.++..+...+ .++.+.+++..++.|++.+...+...+.
T Consensus 264 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am 343 (444)
T PRK09669 264 DLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSM 343 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666677888899999999999999999998887766654433322 3467777788889999999999999999
Q ss_pred HHhhcC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 018453 172 IAETAP-------TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210 (355)
Q Consensus 172 ~~e~~~-------~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 210 (355)
++|..+ ++..|...+....+..+|..+|+.+++.+.+..
T Consensus 344 ~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~ 389 (444)
T PRK09669 344 FSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWV 389 (444)
T ss_pred HHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 998875 334567788899999999999999999887643
No 196
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.00 E-value=2.2e-08 Score=93.19 Aligned_cols=129 Identities=16% Similarity=0.170 Sum_probs=88.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (355)
+|.+..+.+.+.+...++.+++.++.+++.||+|||+.+.++.++..++.++..+.++.+..+..-.+.+.|.+...+.
T Consensus 234 ~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~- 312 (392)
T PRK10473 234 MGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFGV- 312 (392)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-
Confidence 6888999999999999999999999999999999999999999888888887777665554444445555544443333
Q ss_pred HHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHH
Q 018453 169 PMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPL 223 (355)
Q Consensus 169 ~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~ 223 (355)
....+..|.++|+ +......+++..+++.+++++.+.. |+.....+.+.+
T Consensus 313 -~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~-g~~~~~~~~~~~ 362 (392)
T PRK10473 313 -AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVL-GISAWNMLIGIL 362 (392)
T ss_pred -HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHH
Confidence 2334555654443 3333445566666666666666554 555544444443
No 197
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.98 E-value=5.2e-09 Score=95.42 Aligned_cols=112 Identities=31% Similarity=0.440 Sum_probs=98.4
Q ss_pred ccCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHhhH
Q 018453 89 YDLS-SVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA---PDFIIMVVGRFVFGIGIGLA 164 (355)
Q Consensus 89 ~~~s-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~r~l~G~~~g~~ 164 (355)
+|.+ ..+.+.+.+...++..++.++.|++.||+|+|+...+......+..+...+. ++....++..++.|++.+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 316 (352)
T PF07690_consen 237 LGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIV 316 (352)
T ss_dssp HHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 7888 7899999999999999999999999999999888877777777666655543 34566777888999999999
Q ss_pred HhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHH
Q 018453 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGY 200 (355)
Q Consensus 165 ~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~ 200 (355)
.+....++.|..|+++||++.++.+...++|..+||
T Consensus 317 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 317 FPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp CHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 999999999999999999999999999999999987
No 198
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.97 E-value=1e-08 Score=87.57 Aligned_cols=125 Identities=17% Similarity=0.075 Sum_probs=101.9
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH-HHHhhhhHHHHHHHHHHHHHHHhhHHhH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGAL-VTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 167 (355)
+|+|+...+.+.+....-..+.+++.|.++|++|++...+.+..+..+..- +..+ +.+.-..+..+.|+........
T Consensus 295 fGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsysllAcs 372 (459)
T KOG4686|consen 295 FGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYSLLACS 372 (459)
T ss_pred hCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHHHHHHH
Confidence 899999999999999999999999999999999999877766555444333 2222 3334456677888888777777
Q ss_pred HHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhH
Q 018453 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRY 215 (355)
Q Consensus 168 ~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~ 215 (355)
....++-..|.++-|++.|..+...++|-.+-|++++.+.++.+++-+
T Consensus 373 lWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~ 420 (459)
T KOG4686|consen 373 LWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDN 420 (459)
T ss_pred HhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhh
Confidence 778888899999999999999999999999999999999987754443
No 199
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.95 E-value=2.5e-08 Score=93.50 Aligned_cols=134 Identities=10% Similarity=-0.014 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH-hh-----hhHHHHHHHHHHHHHHHhhHHhHHHHHHH
Q 018453 100 TSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA-LA-----PDFIIMVVGRFVFGIGIGLAMHAAPMYIA 173 (355)
Q Consensus 100 ~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~-~~-----~~~~~~~~~r~l~G~~~g~~~~~~~~~~~ 173 (355)
..+..+...+..+++|+++||+|+|+++.++.++..+...... .. .+.+.+.++.+...++.|........++.
T Consensus 292 ~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip 371 (462)
T PRK15034 292 AFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIA 371 (462)
T ss_pred HHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhH
Confidence 4445677888999999999999999999988887766654322 22 24555555555544555555555566666
Q ss_pred hhcCC---------------------CchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHh
Q 018453 174 ETAPT---------------------PMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMW 232 (355)
Q Consensus 174 e~~~~---------------------~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~ 232 (355)
+.+|+ ++-|...|+......+|+++-|.+-+...+..+++...|++..+..+++.++.+
T Consensus 372 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w 451 (462)
T PRK15034 372 VIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTW 451 (462)
T ss_pred HHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 66663 257788999999999999999988888887777899999888887777666554
Q ss_pred h
Q 018453 233 W 233 (355)
Q Consensus 233 ~ 233 (355)
+
T Consensus 452 ~ 452 (462)
T PRK15034 452 L 452 (462)
T ss_pred H
Confidence 4
No 200
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.91 E-value=1.3e-07 Score=83.85 Aligned_cols=178 Identities=23% Similarity=0.156 Sum_probs=136.6
Q ss_pred CcchHHHHHHHHHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-c
Q 018453 44 NYSVSAAILPFLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADIL-G 122 (355)
Q Consensus 44 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-G 122 (355)
-|+.+..|.+.+...+.++.++... ..+|.+..| .|+|..+.|+..+...+..+..++....+.+|. .
T Consensus 204 vw~~~~aW~vtLfmGlqS~~~Y~~~----~WLP~ili~-------~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n 272 (395)
T COG2807 204 VWRSPLAWQVTLFMGLQSLLYYIVI----GWLPAILID-------RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKN 272 (395)
T ss_pred cccCchhHHHHHHHHhhHHHHHHHH----HHHHHHHHH-------cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4555666776677776666655544 356666665 699999999999999999999999999999965 5
Q ss_pred cHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHH
Q 018453 123 RRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPT-PMRGQLISLKEFFIVLGMVGGYG 201 (355)
Q Consensus 123 rr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~-~~r~~~~~~~~~~~~~g~~~~~~ 201 (355)
+|+..+....+..++...+.+.+....+.. -++.|+|.|..++.....+..-... ++-+...++.|...-+=..+||.
T Consensus 273 ~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~ 351 (395)
T COG2807 273 QRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPW 351 (395)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhh
Confidence 677777777777788777777655333333 4899999999999999988877644 55566777778777777899999
Q ss_pred HHHHhhccccchhHHHHhHHHHHHHHHHHHhh
Q 018453 202 IGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (355)
Q Consensus 202 i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~ 233 (355)
+.|++-|..++|+...+......++..+.-+.
T Consensus 352 l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~ 383 (395)
T COG2807 352 LFGFLHDATGSWSAPLVLLALATLLMLIFGLR 383 (395)
T ss_pred hHhHHHHhcCChHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999888777776665554433
No 201
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.89 E-value=4.1e-09 Score=97.47 Aligned_cols=145 Identities=17% Similarity=0.155 Sum_probs=130.5
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA 168 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 168 (355)
++-.+...|........|-++.-++.+++.+++|+-+++.+++.+.++=.+..++..|.|+.+..-+++|+..+..+..+
T Consensus 401 ~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~ 480 (618)
T KOG3762|consen 401 LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAI 480 (618)
T ss_pred cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHH
Confidence 56666777777778888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCchhHHHHHH-HHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhc
Q 018453 169 PMYIAETAPTPMRGQLISLK-EFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWL 234 (355)
Q Consensus 169 ~~~~~e~~~~~~r~~~~~~~-~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 234 (355)
.+|++...|++.|.++-++. ....++|--+|.+|++.+.+.. +-|..|.+.++.|++.+++...+
T Consensus 481 ~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f-g~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 481 ISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF-GARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred HHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee-hhHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999987 6678999999999999999988 88999999888888876665554
No 202
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.88 E-value=3.5e-08 Score=93.06 Aligned_cols=115 Identities=21% Similarity=0.255 Sum_probs=103.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHhhHHhHHHHH
Q 018453 94 VEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP--DFIIMVVGRFVFGIGIGLAMHAAPMY 171 (355)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~r~l~G~~~g~~~~~~~~~ 171 (355)
...+.+..+..++.+++.++.++++||+|+|+.+..+.++.+++.++..+.+ +.+.+++..++.|++.+...+...+.
T Consensus 260 ~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~ 339 (428)
T PF13347_consen 260 GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAM 339 (428)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccc
Confidence 5677888899999999999999999999999999999999999999888775 89999999999999999999999999
Q ss_pred HHhhcC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 018453 172 IAETAP-------TPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (355)
Q Consensus 172 ~~e~~~-------~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 208 (355)
++|..+ ++..|...++......+|..+++.+.+.+.+
T Consensus 340 ~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~ 383 (428)
T PF13347_consen 340 LADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLA 383 (428)
T ss_pred cccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHH
Confidence 998876 3456899999999999999999999888774
No 203
>PRK11043 putative transporter; Provisional
Probab=98.87 E-value=2.5e-07 Score=86.38 Aligned_cols=120 Identities=16% Similarity=0.146 Sum_probs=93.9
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH---Hh--hhhHHHHHHHHHHHHHHHhh
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVT---AL--APDFIIMVVGRFVFGIGIGL 163 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~---~~--~~~~~~~~~~r~l~G~~~g~ 163 (355)
+|.+..+.++......++..++.+..+++.||+|+|+.+....++..++.+.. .. .++.+.+++...+.|++.+.
T Consensus 233 ~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (401)
T PRK11043 233 MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGA 312 (401)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHH
Confidence 68899999998888889999999999999999999987665554444433322 22 23455556667788888888
Q ss_pred HHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018453 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (355)
Q Consensus 164 ~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 209 (355)
..+.......+..| ++||++.++.+.....+...++.+.+.+.+.
T Consensus 313 ~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 313 IYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 88888888777776 5799999999998888889999998888764
No 204
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.87 E-value=1.6e-07 Score=89.69 Aligned_cols=137 Identities=18% Similarity=0.149 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc-----HHH--HHHHHHHHHHHHHHHHh---------hhhHHHHHHHHHHHHH
Q 018453 96 IGLITSGSLYGALIGSILAFNIADILGR-----RRE--LILAALLYLVGALVTAL---------APDFIIMVVGRFVFGI 159 (355)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-----r~~--~~~~~~l~~~~~~~~~~---------~~~~~~~~~~r~l~G~ 159 (355)
.+++.+...+..++.+++..++..+.+| +.. +.+|.++.+++.+..++ ..+++.++...++.|+
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 6788888888888888876654444443 232 36788888888877764 3588899999999999
Q ss_pred HHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhh
Q 018453 160 GIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW 233 (355)
Q Consensus 160 ~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~ 233 (355)
|.....+....++.+..|++.||+++|++.....+|..+++.+........ +|...|...++.+++..++.++
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 466 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQ-GVTGVFGKIGLVTLLVGVVMAL 466 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-chhhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988776654 7888888777776665554433
No 205
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.87 E-value=1.3e-07 Score=83.66 Aligned_cols=133 Identities=32% Similarity=0.524 Sum_probs=109.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhh--HHHHHHHHHHHHHHHhhHHhHHHHH
Q 018453 94 VEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPD--FIIMVVGRFVFGIGIGLAMHAAPMY 171 (355)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~r~l~G~~~g~~~~~~~~~ 171 (355)
...++..+.+.++..++.++.|.+.||+|||+.+..+.....++.++..+..+ .+.+++.|++.|++.+...+....+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 118 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASAL 118 (338)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 47899999999999999999999999999998888887765666666666665 8889999999999999999999999
Q ss_pred HHhhcCC-CchhHHHHHHHH-HHHHHHHHHHHHHHHhhcc-ccchhHHHHhHHHHHHH
Q 018453 172 IAETAPT-PMRGQLISLKEF-FIVLGMVGGYGIGSLLVDL-VAGWRYMYGASTPLAVI 226 (355)
Q Consensus 172 ~~e~~~~-~~r~~~~~~~~~-~~~~g~~~~~~i~~~l~~~-~~~w~~~~~~~~~~~~~ 226 (355)
+.|+.|+ ++|+...+.... ...+|..+++.+++.+... ..+|+..|.+.......
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (338)
T COG0477 119 LSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLL 176 (338)
T ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 9999998 678999998888 6888888988777766544 22788866665555443
No 206
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.85 E-value=2.4e-07 Score=86.84 Aligned_cols=131 Identities=8% Similarity=-0.017 Sum_probs=100.4
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHH
Q 018453 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAP 169 (355)
Q Consensus 90 ~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~ 169 (355)
+.+....+...+.+..+..+|.++++++.||+++|+.+.+..++..+..++..+.++... ..+-++.|++.+..+|...
T Consensus 265 ~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~i~ 343 (410)
T TIGR00885 265 GMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPTIY 343 (410)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHH
Confidence 445555566677777888999999999999999999998888888888888887766544 5667788888888999999
Q ss_pred HHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc-----cchhHHHHhHHHH
Q 018453 170 MYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV-----AGWRYMYGASTPL 223 (355)
Q Consensus 170 ~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~-----~~w~~~~~~~~~~ 223 (355)
....+..+++.+....++... .+|+.+.|++.|.+.|.. ++.+..|++..++
T Consensus 344 sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~ 400 (410)
T TIGR00885 344 GIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLC 400 (410)
T ss_pred HHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHHHhcccccCccchHHHHHHHH
Confidence 999999986654334443333 399999999999999843 2577777764443
No 207
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.82 E-value=2.1e-06 Score=79.98 Aligned_cols=120 Identities=25% Similarity=0.328 Sum_probs=100.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHhhHHh
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP--DFIIMVVGRFVFGIGIGLAMH 166 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~r~l~G~~~g~~~~ 166 (355)
+|.++....+.......+.+++.++...+.+|+|+|+.+.++.++.+++.++.-+.+ +.+.+++..++.+++.+...+
T Consensus 267 lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~ 346 (467)
T COG2211 267 LGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANP 346 (467)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhcccc
Confidence 455667777788888888888899999999999999999999999999999888765 678888889999999999988
Q ss_pred HHHHHHHhhcC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 018453 167 AAPMYIAETAP-------TPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (355)
Q Consensus 167 ~~~~~~~e~~~-------~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 208 (355)
...+.++|..+ .+.-|...+....+.-+|..++..+.+++.+
T Consensus 347 l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~ 395 (467)
T COG2211 347 LPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILG 395 (467)
T ss_pred ccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888776653 3445677888888888999999888888774
No 208
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.82 E-value=3.3e-07 Score=84.71 Aligned_cols=115 Identities=17% Similarity=0.160 Sum_probs=83.0
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH---h-hhhHHHHHHHHHHHHHHHhhH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA---L-APDFIIMVVGRFVFGIGIGLA 164 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~---~-~~~~~~~~~~r~l~G~~~g~~ 164 (355)
+|.+..+.+++.+...++.+++.++.|++.||+|||+.+..+..+..+..+... . ..+.+.+.++-.+.+.+.+..
T Consensus 225 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (377)
T PRK11102 225 NGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMI 304 (377)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh
Confidence 688999999999999999999999999999999999998887766544333222 1 123444444554555555555
Q ss_pred HhHHHHHHHhhcCCCchhHHHHHHHH-HHHHHHHHHHHHHH
Q 018453 165 MHAAPMYIAETAPTPMRGQLISLKEF-FIVLGMVGGYGIGS 204 (355)
Q Consensus 165 ~~~~~~~~~e~~~~~~r~~~~~~~~~-~~~~g~~~~~~i~~ 204 (355)
......++.|..| +.+|.+.++... ...+|..++++++.
T Consensus 305 ~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 305 SSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred hHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5555667777766 789999988654 35677777777654
No 209
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.81 E-value=5.4e-09 Score=89.24 Aligned_cols=121 Identities=21% Similarity=0.239 Sum_probs=102.4
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHhhH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI-LGRRRELILAALLYLVGALVTAL---APDFIIMVVGRFVFGIGIGLA 164 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~r~l~G~~~g~~ 164 (355)
.+++.++..++.+++..-..+-.+++|++.|| +|.|..-++-++...++-++.+. .+.+|++.++||+.|+|.-..
T Consensus 74 ~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESl 153 (459)
T KOG4686|consen 74 SNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESL 153 (459)
T ss_pred cccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhh
Confidence 67778888999999999999999999999986 68887766666666666665543 578999999999999998888
Q ss_pred HhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018453 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (355)
Q Consensus 165 ~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 209 (355)
.+.-+.|..-|+..|+-+..+|+......+|+.+-..+.+++.+.
T Consensus 154 AVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~ 198 (459)
T KOG4686|consen 154 AVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDT 198 (459)
T ss_pred hhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHH
Confidence 888899999999999999999999999999998877777777654
No 210
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.81 E-value=1.1e-07 Score=90.44 Aligned_cols=147 Identities=15% Similarity=0.134 Sum_probs=118.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh----------hhHHHHHHHHHHHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA----------PDFIIMVVGRFVFG 158 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~----------~~~~~~~~~r~l~G 158 (355)
+|.++.+.|++.....++.+++....+++.+|++.|+.+.++.++.+++.+..... ++.+.++...++.+
T Consensus 283 lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~ 362 (468)
T TIGR00788 283 LPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAE 362 (468)
T ss_pred CCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHH
Confidence 79999999999999999999999999999999999999999999998887554311 33344556678889
Q ss_pred HHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccc-----hhHHHH---hHHHHHHHHHHH
Q 018453 159 IGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAG-----WRYMYG---ASTPLAVIMGMG 230 (355)
Q Consensus 159 ~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~-----w~~~~~---~~~~~~~~~~~~ 230 (355)
++.+........++.+..|++.+|+..++.+...++|..+++.+++.+.+.. | ++..+. ++.+..++.+..
T Consensus 363 ~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~-g~~~~~~~~~~~~i~i~~~~~l~~l~~ 441 (468)
T TIGR00788 363 VLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETI-GITCDNSNNLWLLILGHSLAPLLPLPL 441 (468)
T ss_pred HHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCcccccchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999888655 3 443333 333334444444
Q ss_pred Hhhccc
Q 018453 231 MWWLPA 236 (355)
Q Consensus 231 ~~~~~e 236 (355)
.+++|+
T Consensus 442 ~~llP~ 447 (468)
T TIGR00788 442 LHLLPR 447 (468)
T ss_pred HHhCCC
Confidence 456776
No 211
>PRK09848 glucuronide transporter; Provisional
Probab=98.80 E-value=1.9e-07 Score=88.61 Aligned_cols=117 Identities=10% Similarity=0.102 Sum_probs=78.8
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh----ccHHHH-HHHHHHHHHHHHHHH-hh----hh--HHHHHHHHHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADIL----GRRREL-ILAALLYLVGALVTA-LA----PD--FIIMVVGRFV 156 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----Grr~~~-~~~~~l~~~~~~~~~-~~----~~--~~~~~~~r~l 156 (355)
+|++..+.|.+.+...+..++..++.|+++||. |||+.. +++.+...+..++.. .. .+ ...+++..++
T Consensus 39 ~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (448)
T PRK09848 39 AGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMG 118 (448)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHH
Confidence 699999999999999999999999999999996 777655 445554444433322 11 11 2233445567
Q ss_pred HHHHHhhHHhHHHHHHHhhcC-CCchhHHHHHHHHHHH-----HHHHHHHHHHHH
Q 018453 157 FGIGIGLAMHAAPMYIAETAP-TPMRGQLISLKEFFIV-----LGMVGGYGIGSL 205 (355)
Q Consensus 157 ~G~~~g~~~~~~~~~~~e~~~-~~~r~~~~~~~~~~~~-----~g~~~~~~i~~~ 205 (355)
.+++.+...+...+...+... +++|.+..+.-..+.+ +|..++|.+++.
T Consensus 119 ~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~ 173 (448)
T PRK09848 119 LGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNS 173 (448)
T ss_pred HHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 788888777777777777764 4678887666554433 445556655543
No 212
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.80 E-value=3.8e-08 Score=92.76 Aligned_cols=175 Identities=12% Similarity=0.046 Sum_probs=120.3
Q ss_pred HHHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------H
Q 018453 54 FLFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGR---------R 124 (355)
Q Consensus 54 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr---------r 124 (355)
+..+.++.+...+....+...+|.+.++ .+|.+..+.|++.++..+...+..++.|.++||.-+ |
T Consensus 260 vwai~~~~f~~~~~~~~l~~y~PtY~~~------VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rk 333 (466)
T KOG2532|consen 260 VWAIWISAFGGNWGFYLLLTYLPTYLKE------VLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRK 333 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHH------HhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHH
Confidence 3445566666666777777888888883 389999999999999999999999999999998855 3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 018453 125 RELILAALLYLVGALVTALAPD-FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIG 203 (355)
Q Consensus 125 ~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 203 (355)
..-.++....++..++.++.++ ...+.+.-+..+++..+........-.....+++-+..+|+.+....+.++++|.+.
T Consensus 334 ifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~v 413 (466)
T KOG2532|consen 334 IFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLV 413 (466)
T ss_pred HHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHhe
Confidence 3333455555666666666542 111111111222222222222222222221567889999999999999999999999
Q ss_pred HHhhc--cccchhHHHHhHHHHHHHHHHHHhhc
Q 018453 204 SLLVD--LVAGWRYMYGASTPLAVIMGMGMWWL 234 (355)
Q Consensus 204 ~~l~~--~~~~w~~~~~~~~~~~~~~~~~~~~~ 234 (355)
+.+.. ....|+++|++.+++.++..+.+.++
T Consensus 414 g~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 414 GIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred eeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 99984 23489999999999988876655443
No 213
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.80 E-value=2.4e-07 Score=87.16 Aligned_cols=131 Identities=21% Similarity=0.295 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH--HhhHHhHHHHHHHhhcCCC
Q 018453 102 GSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIG--IGLAMHAAPMYIAETAPTP 179 (355)
Q Consensus 102 ~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~--~g~~~~~~~~~~~e~~~~~ 179 (355)
...+..++..+..|.++||+|||..+.+..+...+..++..+.. +|.++ +.|+. .+.......+++++....+
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~ 144 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEE 144 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchh
Confidence 44677889999999999999999999999999888888777755 44433 33332 3445677788999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHH-hhcccch
Q 018453 180 MRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGM-WWLPASP 238 (355)
Q Consensus 180 ~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~esp 238 (355)
+|....++.......+..++|.+++.+.... |.-..|.+..+..++..+.. +++||+-
T Consensus 145 ~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~-~~a~~f~ia~~~~~~~~~y~~~~l~Esl 203 (463)
T KOG2816|consen 145 ERSSSIGLLSGTFGAGLVIGPALGGYLVKFL-GIALVFLIAAASGILSLLYMLLFLPESL 203 (463)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhhcccccc
Confidence 9999999999999999999999999999886 88899999988888876654 5578874
No 214
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.79 E-value=4.4e-07 Score=87.20 Aligned_cols=136 Identities=12% Similarity=0.062 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHHHHHHHH----HHHHHHhccHHHHHHHHHHHHHHHHHHHhhhh---------HHHHHHHHHHHHHHHh
Q 018453 96 IGLITSGSLYGALIGSILA----FNIADILGRRRELILAALLYLVGALVTALAPD---------FIIMVVGRFVFGIGIG 162 (355)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~----g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~---------~~~~~~~r~l~G~~~g 162 (355)
.+++.++..+..++..++. +++.+|++.++.+.++.++.+++.++.++..+ .+.++..+++.|+|.+
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 4566666666666666665 55556666668888999999999988776654 4578889999999999
Q ss_pred hHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhc---------cccchhHHHHhHHHHHHHHHHHH
Q 018453 163 LAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD---------LVAGWRYMYGASTPLAVIMGMGM 231 (355)
Q Consensus 163 ~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~---------~~~~w~~~~~~~~~~~~~~~~~~ 231 (355)
...+....++.+..|++.||+++|++.....+|..++..+...... ..+++.+.|...++++++..++.
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~ 475 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLM 475 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998888888888777653221 11146778877777766544333
No 215
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.78 E-value=2.1e-07 Score=83.79 Aligned_cols=92 Identities=17% Similarity=0.184 Sum_probs=77.5
Q ss_pred hhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc------------
Q 018453 143 LAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV------------ 210 (355)
Q Consensus 143 ~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~------------ 210 (355)
...+++.++++-++.|.|.+...+..+.++.+..|++++++.+++.+.++++|.+++|.+++.+....
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 45789999999999999999999999999999999999999999999999999999999999887321
Q ss_pred ---cchhHHHHhHHHHHHHHHHHHhhc
Q 018453 211 ---AGWRYMYGASTPLAVIMGMGMWWL 234 (355)
Q Consensus 211 ---~~w~~~~~~~~~~~~~~~~~~~~~ 234 (355)
.+|++.|++.+.+.++..+.+.+.
T Consensus 86 ~~~~~~~~~yl~ia~~~~~~~i~~~~~ 112 (310)
T TIGR01272 86 AEAAKVHTPYLLLAGALAVLAIIFAFL 112 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 268999987666655544444443
No 216
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.77 E-value=2.9e-07 Score=85.62 Aligned_cols=149 Identities=21% Similarity=0.172 Sum_probs=114.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHH----hccH-HHHHHHHHHHHHHHHHHHhhhh------HHHHHHHHHHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI----LGRR-RELILAALLYLVGALVTALAPD------FIIMVVGRFVF 157 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr-~~~~~~~~l~~~~~~~~~~~~~------~~~~~~~r~l~ 157 (355)
+|++....|.+..+.=+.-++.-++.|.+.|| +||+ +.++++.+..++...++...++ ..-.++...+.
T Consensus 43 ~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~ 122 (467)
T COG2211 43 FGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLL 122 (467)
T ss_pred cCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHH
Confidence 79999999999999999999999999999995 7775 5555677777877777776653 33445667888
Q ss_pred HHHHhhHHhHHHHHHHhhc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHhhc----c--ccchhHHHHhHHHHHHHHHHH
Q 018453 158 GIGIGLAMHAAPMYIAETA-PTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD----L--VAGWRYMYGASTPLAVIMGMG 230 (355)
Q Consensus 158 G~~~g~~~~~~~~~~~e~~-~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~----~--~~~w~~~~~~~~~~~~~~~~~ 230 (355)
+++.......-.++..|+. .+++|.+..++-+.+..+|.++...+...+.. . ..||+...++.+++.++..+.
T Consensus 123 ~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~ 202 (467)
T COG2211 123 GLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLF 202 (467)
T ss_pred HHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence 8988888888888888887 46889999999999999998777666655552 1 237888888877777766555
Q ss_pred Hhh-cccc
Q 018453 231 MWW-LPAS 237 (355)
Q Consensus 231 ~~~-~~es 237 (355)
.++ .+|.
T Consensus 203 ~~~~v~ER 210 (467)
T COG2211 203 CFFNVKER 210 (467)
T ss_pred HHHHhhcc
Confidence 444 5554
No 217
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.76 E-value=1.5e-06 Score=78.89 Aligned_cols=143 Identities=20% Similarity=0.206 Sum_probs=120.5
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHhhH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIAD-ILGRRRELILAALLYLVGALVTAL---APDFIIMVVGRFVFGIGIGLA 164 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~Grr~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~r~l~G~~~g~~ 164 (355)
+|++..+...+......|..++-...|++.. |.++++...+++.+..++..+..+ ..+.+.+...-++.|++.|..
T Consensus 239 fgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f 318 (403)
T PF03209_consen 239 FGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLF 318 (403)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHH
Confidence 8999999999999999999999999998876 678888877888887777665544 356888999999999999999
Q ss_pred HhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc---------ccchhHHHHhHHHHHHHHHHHH
Q 018453 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL---------VAGWRYMYGASTPLAVIMGMGM 231 (355)
Q Consensus 165 ~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~---------~~~w~~~~~~~~~~~~~~~~~~ 231 (355)
.......+.+...+++.|..+|.+...+.++..++..+++.+.|. ..+|..+|.+.++..++++++.
T Consensus 319 ~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 319 TVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999887751 1257777777777766655443
No 218
>PRK11462 putative transporter; Provisional
Probab=98.72 E-value=4e-06 Score=79.78 Aligned_cols=115 Identities=22% Similarity=0.194 Sum_probs=79.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHhhHHhHHHHH
Q 018453 94 VEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP--DFIIMVVGRFVFGIGIGLAMHAAPMY 171 (355)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~r~l~G~~~g~~~~~~~~~ 171 (355)
...+.+...+.++.+++.++++++.||+|+|+.+..+..+.++..++..+.+ +...+++.-++.|++.+...+....+
T Consensus 263 ~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m 342 (460)
T PRK11462 263 EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVM 342 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445677788888999999999999999999987755554444333333322 23334455566788777666666666
Q ss_pred HHhhcC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 018453 172 IAETAP-------TPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (355)
Q Consensus 172 ~~e~~~-------~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 208 (355)
+.|..+ .+..|...+.......+|..+++.+++.+++
T Consensus 343 ~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~ 386 (460)
T PRK11462 343 MSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLA 386 (460)
T ss_pred HHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666654 3334555677778888999999988888774
No 219
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.71 E-value=3.6e-06 Score=78.37 Aligned_cols=120 Identities=15% Similarity=0.089 Sum_probs=92.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH-HHHHHHHh--hhhHHHHHHHHHHHHHHHhhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYL-VGALVTAL--APDFIIMVVGRFVFGIGIGLAM 165 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~-~~~~~~~~--~~~~~~~~~~r~l~G~~~g~~~ 165 (355)
+|.+..+.+++.....++..++..+.+++.||++++........+.. +....... ..+.+.+.+..++.|++.+...
T Consensus 238 ~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 317 (394)
T PRK11652 238 LGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLF 317 (394)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH
Confidence 68888999999989999999999999999999984433322222222 22222222 2355667778899999999999
Q ss_pred hHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018453 166 HAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (355)
Q Consensus 166 ~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 209 (355)
+....+..|..| +++|...++.+....+|..+++.+++.+...
T Consensus 318 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 318 PLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 999999999887 5789999999999999999999999887654
No 220
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.70 E-value=4.1e-06 Score=82.38 Aligned_cols=145 Identities=16% Similarity=0.236 Sum_probs=118.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHhhh--------hHHHHHHHHHHHHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI-LGRRRELILAALLYLVGALVTALAP--------DFIIMVVGRFVFGI 159 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~l~~~~~~~~~~~~--------~~~~~~~~r~l~G~ 159 (355)
+|++......+...+....-+..+++|+++|+ +|+++.++++.++..++.++.++.. .....+++-++..+
T Consensus 18 lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~ 97 (654)
T TIGR00926 18 LGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIAL 97 (654)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHh
Confidence 57888888888888888888999999999996 6999999999999999988877642 12345677788889
Q ss_pred HHhhHHhHHHHHHHhhcCCC---chhHHHHHHHHHHHHHHHHHHHHHHHhhccc------cchhHHHHhHHHHHHHHHHH
Q 018453 160 GIGLAMHAAPMYIAETAPTP---MRGQLISLKEFFIVLGMVGGYGIGSLLVDLV------AGWRYMYGASTPLAVIMGMG 230 (355)
Q Consensus 160 ~~g~~~~~~~~~~~e~~~~~---~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~------~~w~~~~~~~~~~~~~~~~~ 230 (355)
|.|+.-+...+...|.++++ +|-....++..+.++|+++++++..++.+.. .+|...|.+.++..++++++
T Consensus 98 G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lv 177 (654)
T TIGR00926 98 GTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIV 177 (654)
T ss_pred hccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHH
Confidence 99999999999999998754 3677888899999999999999998886332 26999999998888877665
Q ss_pred Hhh
Q 018453 231 MWW 233 (355)
Q Consensus 231 ~~~ 233 (355)
...
T Consensus 178 f~~ 180 (654)
T TIGR00926 178 FMA 180 (654)
T ss_pred HHH
Confidence 544
No 221
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.69 E-value=1.3e-08 Score=92.48 Aligned_cols=177 Identities=15% Similarity=-0.001 Sum_probs=122.4
Q ss_pred HHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHH--------HHH-HHHHHHHHHHHHHHHHHHHhccHH
Q 018453 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGL--------ITS-GSLYGALIGSILAFNIADILGRRR 125 (355)
Q Consensus 55 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~--------~~~-~~~~~~~~~~~~~g~l~dr~Grr~ 125 (355)
+..+..+|.+.+.....+.....+.+. +++.+..... ... +...+++.|-.+...+.|++|||+
T Consensus 307 lgt~~~WFllDiafy~~nL~~s~I~~~-------ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~ 379 (538)
T KOG0252|consen 307 LGTAGTWFLLDIAFYGQNLFQSVIFSA-------IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKY 379 (538)
T ss_pred HHHHHHHHhhhhhhhccccHHHHHHHh-------hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHH
Confidence 455666676666655555555555542 3332222111 111 122233345555667799999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhH----HHHHHHHHHHHH-HHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHH
Q 018453 126 ELILAALLYLVGALVTALAPDF----IIMVVGRFVFGI-GIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGY 200 (355)
Q Consensus 126 ~~~~~~~l~~~~~~~~~~~~~~----~~~~~~r~l~G~-~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~ 200 (355)
+.+.+.+++++..+..+...|. ..+++...+..+ +.-+.......+.+|.+|.+.|+++-|+.....-+|+++|.
T Consensus 380 iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~ 459 (538)
T KOG0252|consen 380 IQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGA 459 (538)
T ss_pred HHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHH
Confidence 9999999999999988886551 122222222222 22334455566778999999999999999999999999999
Q ss_pred HHHHHhhc-----cccchhHHHHhHHHHHHHHHHHHhhcccchh
Q 018453 201 GIGSLLVD-----LVAGWRYMYGASTPLAVIMGMGMWWLPASPR 239 (355)
Q Consensus 201 ~i~~~l~~-----~~~~w~~~~~~~~~~~~~~~~~~~~~~esp~ 239 (355)
..-.++.+ .. +.+++|++.++++++..+..+++||+..
T Consensus 460 ~~F~~~t~~~yp~~~-g~~~v~~i~~~~~~~gi~~T~l~pEtk~ 502 (538)
T KOG0252|consen 460 FGFLYLTDHNYPPNI-GVRNVFIILAGCMLLGILFTLLIPETKG 502 (538)
T ss_pred HHhhHhhhccCCccc-cchHHHHHHHHHHHHhHheeEEeecccc
Confidence 99888887 54 8999999999999999998899998754
No 222
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.66 E-value=1.5e-06 Score=83.14 Aligned_cols=138 Identities=14% Similarity=0.130 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHH-------HHHHHHHHHHHHHHHHH-----hh-----hhHHHHHHHHHHHH
Q 018453 96 IGLITSGSLYGALIGSILAFNIADILGRRR-------ELILAALLYLVGALVTA-----LA-----PDFIIMVVGRFVFG 158 (355)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~-------~~~~~~~l~~~~~~~~~-----~~-----~~~~~~~~~r~l~G 158 (355)
.+++.+...+..++..++.+++.||+|+|+ -+.+|.++.+++.+..+ .. .+.+.++...++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 355666677778888889999999999986 36677777776664321 11 24677778899999
Q ss_pred HHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhc---------cccchhHHHHhHHHHHHHHHH
Q 018453 159 IGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD---------LVAGWRYMYGASTPLAVIMGM 229 (355)
Q Consensus 159 ~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~---------~~~~w~~~~~~~~~~~~~~~~ 229 (355)
+|.+...+....++.+..|++.+|.+++++.....+|..+|..++..... ....+.+.|...++.++++.+
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v 470 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAV 470 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988865531 011356677766666665544
Q ss_pred HHhh
Q 018453 230 GMWW 233 (355)
Q Consensus 230 ~~~~ 233 (355)
++++
T Consensus 471 ~~~~ 474 (489)
T PRK10207 471 VMAL 474 (489)
T ss_pred HHHH
Confidence 4433
No 223
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.63 E-value=1.9e-05 Score=75.11 Aligned_cols=146 Identities=19% Similarity=0.139 Sum_probs=106.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH-HHHHHHHHHhh-h-hHHHHHHHHHHHHHHHhhHHhHHHH
Q 018453 94 VEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALL-YLVGALVTALA-P-DFIIMVVGRFVFGIGIGLAMHAAPM 170 (355)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l-~~~~~~~~~~~-~-~~~~~~~~r~l~G~~~g~~~~~~~~ 170 (355)
+..++..++..+...+..++.|.++|+-|+||.++....+ .++.+.+..+. + +++...+..++.-++.+...+...+
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456778888888899999999999999988777654444 44455555553 3 3555555666666788888899999
Q ss_pred HHHhhcCCCch--------------------------hHHHHHHHHHHHHHHHHHHHHHHHhhcccc-------chhHHH
Q 018453 171 YIAETAPTPMR--------------------------GQLISLKEFFIVLGMVGGYGIGSLLVDLVA-------GWRYMY 217 (355)
Q Consensus 171 ~~~e~~~~~~r--------------------------~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~-------~w~~~~ 217 (355)
++.|+.+++.+ ++..+.-.....+|+++.-++...+....+ +.|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 99999999888 899998888888888888777666543221 358888
Q ss_pred HhHHHHHHHH-HHHHhhcccchh
Q 018453 218 GASTPLAVIM-GMGMWWLPASPR 239 (355)
Q Consensus 218 ~~~~~~~~~~-~~~~~~~~esp~ 239 (355)
.+.++..++. ....+++|+.|+
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCC
Confidence 8877776554 444556777654
No 224
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.63 E-value=9.3e-08 Score=85.62 Aligned_cols=158 Identities=18% Similarity=0.126 Sum_probs=119.9
Q ss_pred hhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHH
Q 018453 65 GYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILG--RRRELILAALLYLVGALVTA 142 (355)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G--rr~~~~~~~~l~~~~~~~~~ 142 (355)
+...+..-+.++..+.+. +..+.-+.|+..--..+.+.++..+.|.+.||++ |......++++.++......
T Consensus 283 n~~lafLePtlslwm~e~------m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP 356 (464)
T KOG3764|consen 283 NSSLAFLEPTLSLWMLET------MFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIP 356 (464)
T ss_pred cchHHHhCcccHHHHHHh------ccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhH
Confidence 334444455555544321 3433336677777788899999999999999999 54444456666666777778
Q ss_pred hhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCC------chhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHH
Q 018453 143 LAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTP------MRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYM 216 (355)
Q Consensus 143 ~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~------~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~ 216 (355)
+++++..+++-++..|++.+...........+....+ -.|...++...++++|.++||.+++.+.+.. |++|.
T Consensus 357 ~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~i-GF~wl 435 (464)
T KOG3764|consen 357 FATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAI-GFEWL 435 (464)
T ss_pred hhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeeh-hHHHH
Confidence 8899999999999999988888777777666666443 3568889999999999999999999999998 99999
Q ss_pred HHhHHHHHHHHHH
Q 018453 217 YGASTPLAVIMGM 229 (355)
Q Consensus 217 ~~~~~~~~~~~~~ 229 (355)
..+.++..++-..
T Consensus 436 ~~iig~~n~iyap 448 (464)
T KOG3764|consen 436 MTIIGILNLIYAP 448 (464)
T ss_pred HHHHHHHHHHHHH
Confidence 9988888776443
No 225
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.59 E-value=5.3e-06 Score=75.36 Aligned_cols=126 Identities=16% Similarity=0.198 Sum_probs=97.4
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cHHHHHH-HHHHHHHHHHHHHhh-----h-------h--HH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILG-----RRRELIL-AALLYLVGALVTALA-----P-------D--FI 148 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-----rr~~~~~-~~~l~~~~~~~~~~~-----~-------~--~~ 148 (355)
+++...-.+...+...+... ..+..|..+|+.+ ||..+++ +.++...+..+..++ . + .+
T Consensus 10 L~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g 88 (403)
T PF03209_consen 10 LGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLG 88 (403)
T ss_pred hccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHH
Confidence 67887788887777766655 5889999999999 8866665 555555554444432 2 1 12
Q ss_pred --HHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhH
Q 018453 149 --IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRY 215 (355)
Q Consensus 149 --~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~ 215 (355)
...++.++.|+|.+...+...+.+.|..|+++|++..++......+|.+++..+.+.+.+.+..-|.
T Consensus 89 ~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL 157 (403)
T PF03209_consen 89 LALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERL 157 (403)
T ss_pred HHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHH
Confidence 3345567899999999999999999999999999999999999999999999999999887633333
No 226
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.53 E-value=3.4e-06 Score=81.28 Aligned_cols=147 Identities=20% Similarity=0.258 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHhhHHhHHHHH
Q 018453 95 EIGLITSGSLYGALIGSILAFNIADILGR-RRELILAALLYLVGALVTAL--APDFIIMVVGRFVFGIGIGLAMHAAPMY 171 (355)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~r~l~G~~~g~~~~~~~~~ 171 (355)
..++....+.++..++.++.|.+..+++| |+.++++.+++.++.-+++. .+|....+..-++.|++.|.........
T Consensus 350 ~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~ 429 (599)
T PF06609_consen 350 EIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVI 429 (599)
T ss_pred eeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHe
Confidence 56788888899999999999999988877 45555666666544333333 2455556677889999999888887777
Q ss_pred HHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhc-------------------------------------------
Q 018453 172 IAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD------------------------------------------- 208 (355)
Q Consensus 172 ~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~------------------------------------------- 208 (355)
..-..|.++-|.+.++..+...+|+.+|..+...+..
T Consensus 430 ~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~i 509 (599)
T PF06609_consen 430 AQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAI 509 (599)
T ss_pred eEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhC
Confidence 7777899999999999999999999988887655442
Q ss_pred ------------------cccchhHHHHhHHHHHHHHHHHHhhcccchhHH
Q 018453 209 ------------------LVAGWRYMYGASTPLAVIMGMGMWWLPASPRWL 241 (355)
Q Consensus 209 ------------------~~~~w~~~~~~~~~~~~~~~~~~~~~~esp~~l 241 (355)
...++|++|+....+..++++..+++++..++.
T Consensus 510 PGit~~i~~a~~~A~~~aYa~ay~~V~~~siaFG~vaiiaa~fl~d~~~~m 560 (599)
T PF06609_consen 510 PGITPEIIAAVVAAFQEAYAHAYRYVYYSSIAFGVVAIIAALFLGDIDKYM 560 (599)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChHHhh
Confidence 001588999999889889888888888765543
No 227
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.50 E-value=6.2e-06 Score=74.43 Aligned_cols=157 Identities=13% Similarity=0.088 Sum_probs=120.9
Q ss_pred HHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Q 018453 60 GGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGAL 139 (355)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~ 139 (355)
+.|++--.....+..++.+..+ ..|.+..+.+...+.+..+.++|.+++.++..|+...|.+....++..+-++
T Consensus 244 ~~FlYVG~Eva~gsfl~~y~~~------~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~ 317 (422)
T COG0738 244 AIFLYVGAEVAIGSFLVSYLEE------LLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLL 317 (422)
T ss_pred HHHHHHhHHHHHHHHHHHHHHh------cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 3344444455556666666653 1588999999999999999999999999999999999999998888888888
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHh
Q 018453 140 VTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGA 219 (355)
Q Consensus 140 ~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~ 219 (355)
..++.++...+ .+-++.|+..++.+|...+...+..| ++ ....+..-+...+|+++-|.+.|++.+.. +-...+.+
T Consensus 318 ~~~l~~g~v~~-~~l~~ig~F~simfPTIfslal~~l~-~~-ts~~s~~l~maivGGAiiP~l~G~i~d~~-g~~~~~~~ 393 (422)
T COG0738 318 AVALIGGVVAL-YALFLIGLFNSIMFPTIFSLALKNLG-EH-TSVGSGLLVMAIVGGAIIPPLQGVIADMF-GIQLTFLI 393 (422)
T ss_pred HHHHhcChHHH-HHHHHHHHHhHHHHHHHHHHHHhccC-cc-ccccceeeeeheecchHHHHHHHHHHHhh-hhHHHHHH
Confidence 88888885444 35677888899999999999999998 33 44455556667889999999999999887 66666653
Q ss_pred HHHHHHH
Q 018453 220 STPLAVI 226 (355)
Q Consensus 220 ~~~~~~~ 226 (355)
...+|.+
T Consensus 394 ~pllc~l 400 (422)
T COG0738 394 VPLLCYL 400 (422)
T ss_pred HHHHHHH
Confidence 3333333
No 228
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.50 E-value=1.6e-05 Score=75.38 Aligned_cols=141 Identities=13% Similarity=0.021 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHhhhh---------------------HHHHHHHHH
Q 018453 98 LITSGSLYGALIGSILAFNIADILGR-RRELILAALLYLVGALVTALAPD---------------------FIIMVVGRF 155 (355)
Q Consensus 98 ~~~~~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~~~~l~~~~~~~~~~~~~---------------------~~~~~~~r~ 155 (355)
+....+.+...+.+++..++.+++|+ |+...++.++.+++.+...+.++ .+..++...
T Consensus 309 ~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (477)
T TIGR01301 309 FGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFA 388 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHH
Confidence 44555556666888888999999995 67778888888888887765543 367778888
Q ss_pred HHHHHHhhHHhHHHHHHHhhcCC--CchhHHHHHHHHHHHHHHHHHHHHHHHhhcccc-chhHHHHhHHHHHHHHHHHH-
Q 018453 156 VFGIGIGLAMHAAPMYIAETAPT--PMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVA-GWRYMYGASTPLAVIMGMGM- 231 (355)
Q Consensus 156 l~G~~~g~~~~~~~~~~~e~~~~--~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~-~w~~~~~~~~~~~~~~~~~~- 231 (355)
+.|+..+..+.+-.+++++..++ ++.|..+|+++.+..+.+++..+..+.+.+..+ +-.+++.+.++..+++.+..
T Consensus 389 ~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~ 468 (477)
T TIGR01301 389 ILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLAL 468 (477)
T ss_pred HhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999995 455999999999999999999988877554332 45677888888888766554
Q ss_pred hhcccch
Q 018453 232 WWLPASP 238 (355)
Q Consensus 232 ~~~~esp 238 (355)
+.+|+.+
T Consensus 469 ~~~~~~~ 475 (477)
T TIGR01301 469 ILLPRPR 475 (477)
T ss_pred HhCCCCC
Confidence 4467654
No 229
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.47 E-value=5.1e-07 Score=83.00 Aligned_cols=106 Identities=21% Similarity=0.187 Sum_probs=81.4
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh--h--hHHHHHHHHHHHHHHHhhH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA--P--DFIIMVVGRFVFGIGIGLA 164 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~--~--~~~~~~~~r~l~G~~~g~~ 164 (355)
+|.+..+.+++.+...++.+++.++.|++.||+|+|+.+..+..+...+..+..+. . +.+.+++...+.+++.|..
T Consensus 256 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 335 (366)
T TIGR00886 256 FGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAG 335 (366)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccc
Confidence 68899999999999999999999999999999999988877776666665555432 2 5555555555566666666
Q ss_pred HhHHHHHHHhhcCCCchhHHHHHHHHHHHHH
Q 018453 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLG 195 (355)
Q Consensus 165 ~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g 195 (355)
.+.....+.+..| +++|+.+|+.+....+|
T Consensus 336 ~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 336 NGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred cchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 6666777788877 68999999988877665
No 230
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.43 E-value=1.4e-05 Score=63.65 Aligned_cols=107 Identities=16% Similarity=0.155 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCC
Q 018453 100 TSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTP 179 (355)
Q Consensus 100 ~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~ 179 (355)
.++.+....+++++.+.+.+++|.|+.++++.+...+-.... +-++.+.++.+-++.|++.+..++....++.+...++
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~ 121 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEE 121 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHH
Confidence 455666677888888999999999999999999888655543 4577889999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 018453 180 MRGQLISLKEFFIVLGMVGGYGIGSLLV 207 (355)
Q Consensus 180 ~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 207 (355)
.|++..+++-.....+.++|.++...+.
T Consensus 122 ~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 122 TIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988876654
No 231
>PTZ00207 hypothetical protein; Provisional
Probab=98.41 E-value=7.4e-06 Score=79.29 Aligned_cols=141 Identities=9% Similarity=-0.056 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc---------cHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHH
Q 018453 99 ITSGSLYGALIGSILAFNIADILG---------RRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAP 169 (355)
Q Consensus 99 ~~~~~~~~~~~~~~~~g~l~dr~G---------rr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~ 169 (355)
+++.+.++..+|.+.+|.+....- |-..+.+..+ +.++.++.++.-....+.+.-++.|++.|..+++..
T Consensus 396 ~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~ 474 (591)
T PTZ00207 396 LTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIA 474 (591)
T ss_pred ehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHH
Confidence 788899999999999998872222 2223333444 556666665553336889999999999999999999
Q ss_pred HHHHhhcCCCchhHHHHHHHHHHHHHHHHH-HHHHHHhhccc------------cchhHHHHhHHHHHHHHHHHHhhc-c
Q 018453 170 MYIAETAPTPMRGQLISLKEFFIVLGMVGG-YGIGSLLVDLV------------AGWRYMYGASTPLAVIMGMGMWWL-P 235 (355)
Q Consensus 170 ~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~-~~i~~~l~~~~------------~~w~~~~~~~~~~~~~~~~~~~~~-~ 235 (355)
..++|+|. |+-|+-..+......+|+.+- ..+.|.+.+.. .-++..|++.+.+++++.+....+ -
T Consensus 475 ~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~ 553 (591)
T PTZ00207 475 LVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHL 553 (591)
T ss_pred HHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheee
Confidence 99999999 999999999999999999887 45667666421 137899999999988877665443 3
Q ss_pred cchhHH
Q 018453 236 ASPRWL 241 (355)
Q Consensus 236 esp~~l 241 (355)
++.+++
T Consensus 554 R~r~~y 559 (591)
T PTZ00207 554 QYRRLC 559 (591)
T ss_pred ehHHHH
Confidence 444444
No 232
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.40 E-value=2.1e-05 Score=75.97 Aligned_cols=141 Identities=16% Similarity=0.137 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhH-------------HHHHH-HHHHHHHHHh
Q 018453 97 GLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDF-------------IIMVV-GRFVFGIGIG 162 (355)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~-------------~~~~~-~r~l~G~~~g 162 (355)
.+...+..+...++..+...+.||+|||+.++.+...+.++.++.+..... ..+.. +-++..+. .
T Consensus 332 ~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~-~ 410 (513)
T KOG0254|consen 332 FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFA-I 410 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHh-c
Confidence 455556666667777777899999999999999999999999877754211 11111 22222222 2
Q ss_pred hHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHH--HHhhcccchh
Q 018453 163 LAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM--GMWWLPASPR 239 (355)
Q Consensus 163 ~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~--~~~~~~esp~ 239 (355)
+..++...+.+|.+|.+.|+++.++....+.+...+-......+.... ++...|.+.+..+.+..+ ..+++||+..
T Consensus 411 g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~-~~~~~f~~f~~~~~~~~~~fv~~~~pETkg 488 (513)
T KOG0254|consen 411 GWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEAL-GIGGTFGYFGGICLLSLIIFVFFFVPETKG 488 (513)
T ss_pred ccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhc-cccchHHHHHHHHHHHHHHHheEEcccCCC
Confidence 234555578899999999999999987777666655544433333332 235566655555555443 5566899843
No 233
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.33 E-value=2.4e-06 Score=59.97 Aligned_cols=80 Identities=23% Similarity=0.241 Sum_probs=70.9
Q ss_pred hhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHh
Q 018453 64 YGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL 143 (355)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~ 143 (355)
.|+......+.+|.+.++ .++|..+.+++.+.+++||.+|.+...++.++.++++.+..+.++.++..+.+++
T Consensus 4 mGigRFayTplLP~M~~~-------~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~ 76 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQAD-------GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMAL 76 (85)
T ss_pred hhhHHHHHHhHhHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 355666678899999887 7999999999999999999999999999999988899999999999999999998
Q ss_pred hhhHHHH
Q 018453 144 APDFIIM 150 (355)
Q Consensus 144 ~~~~~~~ 150 (355)
.++.+.+
T Consensus 77 ~~~~~~w 83 (85)
T PF06779_consen 77 THSFWLW 83 (85)
T ss_pred HhchHHH
Confidence 8876654
No 234
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.27 E-value=1.9e-09 Score=102.24 Aligned_cols=137 Identities=21% Similarity=0.158 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH--h--hhhH-----HHHHHHHHHHHHHHh-hHHhHHHHH
Q 018453 102 GSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA--L--APDF-----IIMVVGRFVFGIGIG-LAMHAAPMY 171 (355)
Q Consensus 102 ~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~--~--~~~~-----~~~~~~r~l~G~~~g-~~~~~~~~~ 171 (355)
...+...++.++...+.||+|||+.++.+..+.+++.+..+ . ..+. ...++.-.+..++.+ +..+....+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~ 373 (451)
T PF00083_consen 294 ILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIY 373 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeecccccccccccccccc
Confidence 34445556667777999999999999998888887777664 1 1111 111111222222222 344566688
Q ss_pred HHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHH-HHHHHhhcccchh
Q 018453 172 IAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI-MGMGMWWLPASPR 239 (355)
Q Consensus 172 ~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~-~~~~~~~~~esp~ 239 (355)
..|.+|.+.|+++.++......++.++++.+...+.+.. +-...+++.++++++ ..+.++++|||..
T Consensus 374 ~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~-~~~~~~~i~~~~~~i~~i~~~~~lpET~g 441 (451)
T PF00083_consen 374 TAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNL-GGWGVFLIFAGVCLIAIIFVYFFLPETKG 441 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccc-cccccchhhHHHHHHHHhheeEEEeeCCC
Confidence 899999999999999999999999999988887777665 323444444444444 4455677899853
No 235
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.25 E-value=0.00017 Score=67.64 Aligned_cols=135 Identities=15% Similarity=0.161 Sum_probs=88.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH-----hhhhHHHHHHHHHHHHHHHhh
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA-----LAPDFIIMVVGRFVFGIGIGL 163 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~r~l~G~~~g~ 163 (355)
+|.+..+.++.......+..++..+.+.+.++.++++.+.....+..++.++.. ..++++.++++.++.|+|.+.
T Consensus 249 ~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~ 328 (413)
T PRK15403 249 GGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGL 328 (413)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHH
Confidence 688999999998888888888888888876554444443322222233322222 123343456788888998888
Q ss_pred HHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHH
Q 018453 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (355)
Q Consensus 164 ~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~ 226 (355)
..+......- .-....+|++.++.......+..+++.+.+++.+. +-+..|...++++.+
T Consensus 329 ~~p~~~~~al-~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~ 388 (413)
T PRK15403 329 IFPTLFRFTL-FSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN--GGRLPFHLLAVVAGV 388 (413)
T ss_pred HhHHHHHHHh-ccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCchHHHHHHHHHHH
Confidence 8777765332 12233479999999998888899999998887655 345555554444333
No 236
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.23 E-value=0.0015 Score=61.76 Aligned_cols=116 Identities=6% Similarity=-0.034 Sum_probs=84.8
Q ss_pred ChhHHHHHHHHHHHHHHHH-HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh--h-----------------------
Q 018453 92 SSVEIGLITSGSLYGALIG-SILAFNIADILGRRRELILAALLYLVGALVTALA--P----------------------- 145 (355)
Q Consensus 92 s~~~~~~~~~~~~~~~~~~-~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~--~----------------------- 145 (355)
+.+...++-+...+...+. .++.+++++|++|++.+.+......+..++.++. +
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~ 120 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFM 120 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhH
Confidence 3467788888777766666 8899999999999999887666666555555443 1
Q ss_pred ------hHHHHHHHHHHHHHHHhhHHh-HHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 018453 146 ------DFIIMVVGRFVFGIGIGLAMH-AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV 207 (355)
Q Consensus 146 ------~~~~~~~~r~l~G~~~g~~~~-~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 207 (355)
+.|...+......+-...... .-..+.+|.++.++-.+..+++..+.++|.++++.+..++.
T Consensus 121 ~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 121 GFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122222333334443333444 66889999999999999999999999999999999988876
No 237
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.21 E-value=0.00021 Score=69.27 Aligned_cols=133 Identities=21% Similarity=0.162 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHH---HHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCch
Q 018453 105 YGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFI---IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMR 181 (355)
Q Consensus 105 ~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r 181 (355)
.....+....+...|++|||.....+..+..++.++.++..... ...+...+..++.+..+.....+..|.+|...|
T Consensus 361 ~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r 440 (521)
T KOG0255|consen 361 LVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVR 440 (521)
T ss_pred HHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH
Confidence 35556666668899999999999999999999999998865432 355555666666677777779999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHH-HHHHHhhcccchh
Q 018453 182 GQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI-MGMGMWWLPASPR 239 (355)
Q Consensus 182 ~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~-~~~~~~~~~esp~ 239 (355)
+.+.+...+...+|++++|.+..........+.... .+..+.+ +++..+++||+..
T Consensus 441 ~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~lpet~~ 497 (521)
T KOG0255|consen 441 NTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLIL--FGWLALLLGLLSLLLLPETKG 497 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHH--HHHHHHHHHHHHHhcCcccCC
Confidence 999999999999999999999865543221222222 3444444 4444577898754
No 238
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.20 E-value=3.6e-05 Score=72.58 Aligned_cols=144 Identities=27% Similarity=0.221 Sum_probs=110.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cHHHHHHHHHHHHHHHHHHHhhh----hHHHHHHHHHHHHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILG-----RRRELILAALLYLVGALVTALAP----DFIIMVVGRFVFGI 159 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-----rr~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~r~l~G~ 159 (355)
+|+++.+...+.+...+... ..++.|.++|-+. ||.-++++.++..++.+..+..+ +.....+.-++..+
T Consensus 20 l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~ 98 (433)
T PF03092_consen 20 LGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASF 98 (433)
T ss_pred cCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHH
Confidence 89999999888877776664 4567789999863 55656667777766666555533 35566667788888
Q ss_pred HHhhHHhHHHHHHHhhcC--CCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhc
Q 018453 160 GIGLAMHAAPMYIAETAP--TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWL 234 (355)
Q Consensus 160 ~~g~~~~~~~~~~~e~~~--~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 234 (355)
|......+.-..+.|... ++.||...+.......+|++++..++|.+.+.. +++..|.+.+++.++..+..+++
T Consensus 99 g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~-~~~~~f~i~~~~~~l~~~~~~~~ 174 (433)
T PF03092_consen 99 GYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF-GPQGVFLISAALPLLMLIVALFL 174 (433)
T ss_pred HHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC-CCeEEehHHHHHHHHHHHHHHHh
Confidence 889899999999999872 233788899999999999999999999999887 89999988887766665544443
No 239
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.16 E-value=0.0002 Score=67.59 Aligned_cols=119 Identities=17% Similarity=0.201 Sum_probs=106.4
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHH-HHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAF-NIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g-~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 167 (355)
++++..+.+.+.+...+...+++++.. .+...+|-|+.+..|+....+..++.+++++.|+++....+.++. +...+.
T Consensus 272 f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~-~~~~pa 350 (463)
T KOG2816|consen 272 FGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA-GIVFPA 350 (463)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh-cchhHH
Confidence 799999999888888888888888776 778889999999999999999999999999999998888777764 557888
Q ss_pred HHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 018453 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (355)
Q Consensus 168 ~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 208 (355)
..++++.+..++++|+..++.....++..+++|.+-+.+..
T Consensus 351 ~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 351 IRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred HHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 89999999999999999999999999999999999887754
No 240
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.08 E-value=0.00026 Score=67.45 Aligned_cols=140 Identities=15% Similarity=0.124 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcc--H-----HHHHHHHHHHHHHHHHHHhh---------hhHHHHHHHHHHHH
Q 018453 95 EIGLITSGSLYGALIGSILAFNIADILGR--R-----RELILAALLYLVGALVTALA---------PDFIIMVVGRFVFG 158 (355)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr--r-----~~~~~~~~l~~~~~~~~~~~---------~~~~~~~~~r~l~G 158 (355)
..+|+.+...+..++.+++.+++-.|.+| | .=+.+++++.+++.++..++ .+.+.+++..++.+
T Consensus 309 p~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t 388 (493)
T PRK15462 309 PTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMG 388 (493)
T ss_pred CHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHH
Confidence 35677888888888888888887666632 2 12567888888887666432 24567888899999
Q ss_pred HHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHH-HHHHHHHHHHHHHHhhcc-----------ccchhHHHHhHHHHHHH
Q 018453 159 IGIGLAMHAAPMYIAETAPTPMRGQLISLKEFF-IVLGMVGGYGIGSLLVDL-----------VAGWRYMYGASTPLAVI 226 (355)
Q Consensus 159 ~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~-~~~g~~~~~~i~~~l~~~-----------~~~w~~~~~~~~~~~~~ 226 (355)
+|.-+..|+..+.+++..|++.||+.+|++... ..+|..++..+++..... ...+...|...++.+++
T Consensus 389 ~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 468 (493)
T PRK15462 389 FAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALA 468 (493)
T ss_pred HHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999764 467777777776655310 11355677766666554
Q ss_pred H--HHHHhhc
Q 018453 227 M--GMGMWWL 234 (355)
Q Consensus 227 ~--~~~~~~~ 234 (355)
. ++++.++
T Consensus 469 ~~~~~~~~~~ 478 (493)
T PRK15462 469 CVGVVLMIWL 478 (493)
T ss_pred HHHHHHHHHH
Confidence 4 3344444
No 241
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.05 E-value=6.2e-05 Score=67.54 Aligned_cols=120 Identities=16% Similarity=0.184 Sum_probs=107.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHh
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILG--RRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMH 166 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G--rr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~ 166 (355)
+|+++.+.|-+.+...+++.+.+.......+|.. .+..+..++.+..-..++.+.++....+..+-.+..++.+...+
T Consensus 292 fg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~vt 371 (451)
T KOG2615|consen 292 FGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASVVT 371 (451)
T ss_pred cCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhhH
Confidence 8999999999999999999999998888888887 67777777777777777778888888889999999999999999
Q ss_pred HHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 018453 167 AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (355)
Q Consensus 167 ~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 208 (355)
.....+....|.++||..+|+.....+++-++||+++|.+..
T Consensus 372 ~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 372 CLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred HHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 999999999999999999999999999999999999987763
No 242
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.98 E-value=4.8e-05 Score=52.87 Aligned_cols=65 Identities=20% Similarity=0.240 Sum_probs=53.0
Q ss_pred HHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Q 018453 62 LLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALL 133 (355)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l 133 (355)
+.+....+...|.++.+.++ .|++..+.|.+.++..+...++.+++|.++||+++++.++....+
T Consensus 10 f~~f~~~g~~~Pfl~~~~~~-------~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 10 FFYFAALGCLYPFLPLYLKQ-------LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHhhhhHhhhh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 33344455566677777765 799999999999999999999999999999999999887765554
No 243
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.97 E-value=8.7e-05 Score=70.57 Aligned_cols=160 Identities=14% Similarity=-0.040 Sum_probs=101.3
Q ss_pred HHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHH----hccHHHHHHH
Q 018453 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADI----LGRRRELILA 130 (355)
Q Consensus 55 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr~~~~~~ 130 (355)
...+++.++...........+|.+..+ -.|++..+.+.+.+.+.++.+++.++.|.++|| +.+|..+...
T Consensus 276 w~~~l~~~~~~lv~~~~~~~lpl~l~~------~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~ 349 (495)
T KOG2533|consen 276 WPFSLCYFFLKLVNYGFSYWLPLYLKS------NGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVF 349 (495)
T ss_pred HHHHHHHHHHhhccccHHHHHHHHHHc------CCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 444566666666777777788888774 146899999999999999999999999999999 6777776666
Q ss_pred HHHHHHHH-HHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCch-hHHHHHHHHHHHHHHHHHHHHHHHhh-
Q 018453 131 ALLYLVGA-LVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMR-GQLISLKEFFIVLGMVGGYGIGSLLV- 207 (355)
Q Consensus 131 ~~l~~~~~-~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r-~~~~~~~~~~~~~g~~~~~~i~~~l~- 207 (355)
..+..+.. +......+......+-+..+.+.+...+......++....+.| -...+....+.+.++.+++.+-....
T Consensus 350 ~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~a 429 (495)
T KOG2533|consen 350 LCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDA 429 (495)
T ss_pred HHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccC
Confidence 65555444 4443333333333333444455566667777777777655443 34444455555555555444433222
Q ss_pred ccccchhHHHHhHH
Q 018453 208 DLVAGWRYMYGAST 221 (355)
Q Consensus 208 ~~~~~w~~~~~~~~ 221 (355)
..+ +|...|....
T Consensus 430 p~y-~~~~~f~~~~ 442 (495)
T KOG2533|consen 430 PRY-GWGAVFYMLV 442 (495)
T ss_pred cch-hhhhHHHHHH
Confidence 223 6777774433
No 244
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.94 E-value=4.9e-05 Score=69.73 Aligned_cols=118 Identities=24% Similarity=0.352 Sum_probs=89.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHH----hccHHHHHH-HHHHHHHHHHHHHhhhhH----------------
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADI----LGRRRELIL-AALLYLVGALVTALAPDF---------------- 147 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr~~~~~-~~~l~~~~~~~~~~~~~~---------------- 147 (355)
+|++..+.+.+.-.--+...+.+++.|..+|| |||||.++. +..+..++.++..++.++
T Consensus 62 lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~ra 141 (498)
T KOG0637|consen 62 LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRA 141 (498)
T ss_pred cCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHH
Confidence 68888888888888888999999999999995 788776665 555566777777765542
Q ss_pred -HHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhH-HHHHHHHHHHHHHHHHHHHHHHh
Q 018453 148 -IIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQ-LISLKEFFIVLGMVGGYGIGSLL 206 (355)
Q Consensus 148 -~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~-~~~~~~~~~~~g~~~~~~i~~~l 206 (355)
..++++.-+.-++.......+-+++.|....+++.+ +++++..+.++|+++|-.++++.
T Consensus 142 i~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 142 IVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred HHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc
Confidence 223333344445565677888889999987666666 99999999999999998887744
No 245
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.91 E-value=0.0014 Score=59.88 Aligned_cols=147 Identities=12% Similarity=0.027 Sum_probs=100.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH-HHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHhhHHhH
Q 018453 92 SSVEIGLITSGSLYGALIGSILAFNIADILGRRRELIL-AALLYLVGALVTALAPD---FIIMVVGRFVFGIGIGLAMHA 167 (355)
Q Consensus 92 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~-~~~l~~~~~~~~~~~~~---~~~~~~~r~l~G~~~g~~~~~ 167 (355)
+.+.++...++..+...+..++.|.++|+.|+||..+. ...+.+++.++..+.++ ++..++...+..++.....+.
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 34667788888888888999999999999997766554 44455555556666544 455556778888888888899
Q ss_pred HHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh--c---------------cccchhHHHHhHHHHHHHHHHH
Q 018453 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV--D---------------LVAGWRYMYGASTPLAVIMGMG 230 (355)
Q Consensus 168 ~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~--~---------------~~~~w~~~~~~~~~~~~~~~~~ 230 (355)
-.+++.+..++++-++..++-....-+|+++.-++..... . ....-|.++.+.++..++..+.
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iP 215 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALP 215 (438)
T ss_pred hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhH
Confidence 9999999999988888777766556666655544431111 1 1125677888777776665443
Q ss_pred -Hhhcccch
Q 018453 231 -MWWLPASP 238 (355)
Q Consensus 231 -~~~~~esp 238 (355)
++..++.+
T Consensus 216 m~~~v~~~~ 224 (438)
T COG2270 216 MILNVHDAE 224 (438)
T ss_pred HHhcccccc
Confidence 44455544
No 246
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.87 E-value=0.00012 Score=67.74 Aligned_cols=109 Identities=15% Similarity=0.246 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHHHHHHHhh--h-h------HHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCC---chhHHHHHHHHHH
Q 018453 125 RELILAALLYLVGALVTALA--P-D------FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTP---MRGQLISLKEFFI 192 (355)
Q Consensus 125 ~~~~~~~~l~~~~~~~~~~~--~-~------~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~---~r~~~~~~~~~~~ 192 (355)
++++++.++..+|.++..++ + . ...++++.++.++|.|+.-+....+++|.++++ +|.....+++.+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56788888888888884443 2 1 357888999999999999999999999999765 4677888899999
Q ss_pred HHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhc
Q 018453 193 VLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWL 234 (355)
Q Consensus 193 ~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 234 (355)
++|..++..+.+++.++. +|.+.|.++++..+++++.++.-
T Consensus 82 n~G~~~~~~~~~~i~~~~-~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNY-GWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhcccc-chhhhhhHHHHHHHHHHHHHHhC
Confidence 999999999999998887 99999999998888877665543
No 247
>PRK03612 spermidine synthase; Provisional
Probab=97.85 E-value=0.0046 Score=59.64 Aligned_cols=118 Identities=17% Similarity=0.127 Sum_probs=74.1
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH---HHHHHhhhh----H-HHHHHHHHHHHHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVG---ALVTALAPD----F-IIMVVGRFVFGIG 160 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~---~~~~~~~~~----~-~~~~~~r~l~G~~ 160 (355)
+|.+...++.+.++++.|..+|+.+++++.++.-++ ...+-..+..++ ..+...... . ..++...++.|+.
T Consensus 45 ~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~-~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l 123 (521)
T PRK03612 45 LGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAG-FVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLL 123 (521)
T ss_pred hCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 577888999999999999999999998876433222 222221111111 111111111 1 2223444567788
Q ss_pred HhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 018453 161 IGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (355)
Q Consensus 161 ~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 208 (355)
.|+..|....+..+.. .++-|...|-.+....+|+++|.++.+++.-
T Consensus 124 ~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 124 IGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 8888777776665432 2234677888889999999999999887664
No 248
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.82 E-value=0.00041 Score=63.75 Aligned_cols=111 Identities=21% Similarity=0.095 Sum_probs=82.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH--HHHH---HHHhhhhHHHHHHHHHHHHHHHhhHHh
Q 018453 92 SSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYL--VGAL---VTALAPDFIIMVVGRFVFGIGIGLAMH 166 (355)
Q Consensus 92 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~--~~~~---~~~~~~~~~~~~~~r~l~G~~~g~~~~ 166 (355)
...++.+....+.+|-.++.--...+ |+ |+..+.+.+-.+ +..+ +.-+.++.|.+++.-+..|+..|..++
T Consensus 279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YV 354 (402)
T PF02487_consen 279 PRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYV 354 (402)
T ss_pred HHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHH
Confidence 35677888888888877776543322 33 333333322222 2222 223357889998999999999999999
Q ss_pred HHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 018453 167 AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL 206 (355)
Q Consensus 167 ~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 206 (355)
-....+.|-.|+++|-.+++....+.++|.+++.+++-.+
T Consensus 355 NtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 355 NTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998887665
No 249
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.78 E-value=0.00054 Score=63.01 Aligned_cols=136 Identities=15% Similarity=0.075 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhh
Q 018453 96 IGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAET 175 (355)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~ 175 (355)
.+.+.-+-.+-.++..+...++.+|+..+.-+.+..+++.+++++.+++++.+.-+++-.+.+++.|........+.. .
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~ 139 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-F 139 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-h
Confidence 455566666777888888999999998777778888899999999999999998889999999999988777777644 5
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhh-ccc
Q 018453 176 APTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWW-LPA 236 (355)
Q Consensus 176 ~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~e 236 (355)
+++ ..++-+..+.+.++++|+..-..+...-.+.|..+.+..++.++..+.+++ +|.
T Consensus 140 y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 140 YGK----SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred cCc----cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 553 357788888888888888876655542125577887777766655544444 443
No 250
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.68 E-value=0.0025 Score=60.22 Aligned_cols=149 Identities=17% Similarity=0.206 Sum_probs=109.7
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh----------hhHHHHHHHHHHHHH
Q 018453 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA----------PDFIIMVVGRFVFGI 159 (355)
Q Consensus 90 ~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~----------~~~~~~~~~r~l~G~ 159 (355)
|.++...+.+..+..++.++|..+...+..+..-|+++.++.++.++..+..... ++.+..+.--++..+
T Consensus 251 ~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~ 330 (433)
T PF03092_consen 251 HFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEV 330 (433)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHH
Confidence 4889999999988888999999998888888888888888887777666543221 122223334456666
Q ss_pred HHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccc-------chhHHHHhHHHHHHHHHHHHh
Q 018453 160 GIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVA-------GWRYMYGASTPLAVIMGMGMW 232 (355)
Q Consensus 160 ~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~-------~w~~~~~~~~~~~~~~~~~~~ 232 (355)
..+..+-.....++|..|+..-|+..++.....++|..++..++..+.+..+ +-.+..+++.++.++.+....
T Consensus 331 ~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~ 410 (433)
T PF03092_consen 331 IGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLF 410 (433)
T ss_pred HHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHH
Confidence 6676777778889999999999999999999999999999999988875331 233455566666655666666
Q ss_pred hcccch
Q 018453 233 WLPASP 238 (355)
Q Consensus 233 ~~~esp 238 (355)
++|+..
T Consensus 411 lLp~~~ 416 (433)
T PF03092_consen 411 LLPPQK 416 (433)
T ss_pred HcCCCc
Confidence 677654
No 251
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.51 E-value=0.0039 Score=58.34 Aligned_cols=137 Identities=16% Similarity=0.175 Sum_probs=102.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-------HHHHHHHHHHHHHHHHHHhh----------hhHHHHHHHHHH
Q 018453 94 VEIGLITSGSLYGALIGSILAFNIADILGRR-------RELILAALLYLVGALVTALA----------PDFIIMVVGRFV 156 (355)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr-------~~~~~~~~l~~~~~~~~~~~----------~~~~~~~~~r~l 156 (355)
-..++..+...+.-++.+++..++-.+.+++ .-+-+++.+.+.+.++.... .+.+.++...++
T Consensus 324 vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l 403 (498)
T COG3104 324 VPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVL 403 (498)
T ss_pred cCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHH
Confidence 3457788888999999998888888775543 33456666666666655443 246888899999
Q ss_pred HHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHh------hccccchhHHHHhHHHHHHHHHHH
Q 018453 157 FGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL------VDLVAGWRYMYGASTPLAVIMGMG 230 (355)
Q Consensus 157 ~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l------~~~~~~w~~~~~~~~~~~~~~~~~ 230 (355)
+++|.=+..++...++....|+...+.+++++......|..++..+++.- .+.. .....|+..+...++..+.
T Consensus 404 ~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~-~~~~~F~~~g~v~i~~~~~ 482 (498)
T COG3104 404 QSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAF-IEGRVFGTIGVVAIVIGIL 482 (498)
T ss_pred HHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhh-hhhhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988888888887777631 1222 4556677766666655444
Q ss_pred H
Q 018453 231 M 231 (355)
Q Consensus 231 ~ 231 (355)
.
T Consensus 483 ~ 483 (498)
T COG3104 483 L 483 (498)
T ss_pred H
Confidence 3
No 252
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.46 E-value=0.0041 Score=58.33 Aligned_cols=107 Identities=16% Similarity=0.124 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCC
Q 018453 100 TSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTP 179 (355)
Q Consensus 100 ~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~ 179 (355)
.++.+..+.+.+++.+.+.|+.|.|+.+.++........+...+ .|-+-+++.-++.|+|.+..+..-..|+.|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 67788888999999999999999999999999998877776655 56778888999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 018453 180 MRGQLISLKEFFIVLGMVGGYGIGSLLV 207 (355)
Q Consensus 180 ~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 207 (355)
.+.+..++.-.....+.++|..+...+.
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~~ 162 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIYF 162 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheeee
Confidence 9999999998888888888877655443
No 253
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.40 E-value=0.004 Score=58.64 Aligned_cols=133 Identities=15% Similarity=0.037 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHh-----h---hhHHHHHHHHHHHHHHHhhHHhHHHHHHH
Q 018453 102 GSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL-----A---PDFIIMVVGRFVFGIGIGLAMHAAPMYIA 173 (355)
Q Consensus 102 ~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~-----~---~~~~~~~~~r~l~G~~~g~~~~~~~~~~~ 173 (355)
...+...+..+....+..|+..|.-+..++++..+..++... . ..++..++.-++.|++.+........+.+
T Consensus 53 ~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~~q~s~~gla~ 132 (437)
T TIGR00939 53 ASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMALLQGSLFGLAG 132 (437)
T ss_pred HHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHhhhhhhcccchhhcc
Confidence 344444444444555556666544445554433332222211 1 13556666777888888888877777665
Q ss_pred hhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHh---h-ccc-cchh--HHHHhHHHHHHHHHHHHhhcccchh
Q 018453 174 ETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL---V-DLV-AGWR--YMYGASTPLAVIMGMGMWWLPASPR 239 (355)
Q Consensus 174 e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l---~-~~~-~~w~--~~~~~~~~~~~~~~~~~~~~~esp~ 239 (355)
.+|++ .+..+..+.+++++++.++.-.. . +.. ..++ ..|.+.+++.+++++..+.+++.|.
T Consensus 133 -~fp~~----~~~a~~~G~g~aGv~~s~~~ii~~a~~~~~~~~~~~a~~YF~~a~~v~l~~i~~~~~l~k~~~ 200 (437)
T TIGR00939 133 -VFPST----YSSAVMSGQGLAGVLTSLAMILVKASGNDSHGLKKSALGYFGTPCVVQLICIVCYLLLPKLPF 200 (437)
T ss_pred -cCCHH----HHHHHHhcchhHHHHHHHHHHHHHHhcCCccchhhhhhhHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 45644 34555556666666555543221 1 110 0122 2333444445555555566666654
No 254
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.39 E-value=0.12 Score=48.47 Aligned_cols=118 Identities=13% Similarity=0.052 Sum_probs=84.7
Q ss_pred ChhHHHHHHHHHHH-HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhh---------h---------------
Q 018453 92 SSVEIGLITSGSLY-GALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP---------D--------------- 146 (355)
Q Consensus 92 s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~---------~--------------- 146 (355)
+++...++=+..-+ ++.+..++.+++++++.+.+++-+.........+++++.- +
T Consensus 59 gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l 138 (509)
T COG3202 59 GAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFL 138 (509)
T ss_pred cchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccc
Confidence 45666777666666 7788888999999999999998877777666666665520 1
Q ss_pred --------HHHHHHHHHHHHHHHhhHHh-HHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018453 147 --------FIIMVVGRFVFGIGIGLAMH-AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDL 209 (355)
Q Consensus 147 --------~~~~~~~r~l~G~~~g~~~~-~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 209 (355)
.|...+...+.-+-...... .-..+..|....++-.+..++++.+.+++..++..+..++...
T Consensus 139 ~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 139 KWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred eeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 13333333333332333333 4467789999999999999999999999999999999888753
No 255
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.36 E-value=0.037 Score=52.06 Aligned_cols=109 Identities=19% Similarity=0.291 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HHhccHHHHHHHHHHHHHHHHHHHhhh------------------hHHHHHHHH
Q 018453 96 IGLITSGSLYGALIGSILAFNIA---DILGRRRELILAALLYLVGALVTALAP------------------DFIIMVVGR 154 (355)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~g~l~---dr~Grr~~~~~~~~l~~~~~~~~~~~~------------------~~~~~~~~r 154 (355)
.+...-...+|..+++.+.+.++ +++||++.+.++.++..++.++.-... ++...++.-
T Consensus 281 ~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~ 360 (461)
T KOG3098|consen 281 IAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIG 360 (461)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHH
Confidence 34444445555566666666666 457889988888888877777665421 355777788
Q ss_pred HHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 018453 155 FVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSL 205 (355)
Q Consensus 155 ~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 205 (355)
++.|++-++..+....++.... +++|..+.+++-.-..++..++-.....
T Consensus 361 ~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 361 FLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 9999999999999999999999 5778999998888777777776555443
No 256
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.36 E-value=0.001 Score=59.07 Aligned_cols=230 Identities=17% Similarity=0.144 Sum_probs=146.0
Q ss_pred ccCChhHHH-HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhH
Q 018453 89 YDLSSVEIG-LITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHA 167 (355)
Q Consensus 89 ~~~s~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 167 (355)
.+++..+.. =+.-...-.+.+.-++.=.+.|-..-|++++.-.+..+...++..+.++.+.+=+.-++.|...+ ...+
T Consensus 36 ~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tA-aEIA 114 (433)
T KOG3810|consen 36 KNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATA-AEIA 114 (433)
T ss_pred CCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHH-HHHh
Confidence 466655432 22223344556666677789999999999988877777778888888999988888999999776 5666
Q ss_pred HHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc-cchhHHHHhHHHHHHHHHHHHhhcccchhHHHHhhc
Q 018453 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV-AGWRYMYGASTPLAVIMGMGMWWLPASPRWLLLCAM 246 (355)
Q Consensus 168 ~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~esp~~l~~~~~ 246 (355)
-++|+.+..+++++.+..+..-...-.|-..|..++..++... .++...=.+......++.+..+++|..++-+.-+.+
T Consensus 115 YysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~ 194 (433)
T KOG3810|consen 115 YYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRL 194 (433)
T ss_pred hhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhcc
Confidence 7889999999999999999999999999999988888877543 144444455555556666667777776544333221
Q ss_pred cccCchhhhHHHHHHHHHHHhCCCCCCCchhHHHHHHHhhccccccccchhhhhhcccchhHHHHHHHHHHHHhhhhhhH
Q 018453 247 KRKGDMQDLRESAISCLCRLRGQSIGDSAPTEVDEILTELSYVGEDKEVSLREVFHGKCLKALIIGAGLVLFQQITGQPS 326 (355)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (355)
..+ .... +.++...+....+.. ..-...+..=+..-..++.++...+++....+|.+-
T Consensus 195 ~~~-----------~~v~----~~e~~~~~~~~~~~l-------~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~Q 252 (433)
T KOG3810|consen 195 EDK-----------ISVG----DLEEMNPQASYMSYL-------RGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQ 252 (433)
T ss_pred ccc-----------ceec----cchhcCccchhhHHH-------HHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHH
Confidence 100 0000 000000000000000 000111111122223446666777888889999999
Q ss_pred HHHhHHHHHHHhccc
Q 018453 327 VLYYAASILQDFLQP 341 (355)
Q Consensus 327 ~~~~~~~~~~~~~~~ 341 (355)
+..|.-...++..++
T Consensus 253 V~nY~Q~LW~~~~~~ 267 (433)
T KOG3810|consen 253 VTNYTQILWKEVAPN 267 (433)
T ss_pred HHHHHHHHHHhhCCC
Confidence 999988887776443
No 257
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.14 E-value=0.01 Score=57.73 Aligned_cols=144 Identities=15% Similarity=0.139 Sum_probs=109.8
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHhhhh---------------------
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADIL-GRRRELILAALLYLVGALVTALAPD--------------------- 146 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~l~~~~~~~~~~~~~--------------------- 146 (355)
++.+...+.-..+.+.--.....+.++.++|-| ||-+.+.++.++..++.++..+...
T Consensus 68 ~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~ 147 (571)
T KOG1237|consen 68 LHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESP 147 (571)
T ss_pred hccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCc
Confidence 677667777777777777778888999999975 8888888888888877655443211
Q ss_pred ----HHHHHHHHHHHHHHHhhHHhHHHHHHHhhcC---C-Cc--hhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHH
Q 018453 147 ----FIIMVVGRFVFGIGIGLAMHAAPMYIAETAP---T-PM--RGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYM 216 (355)
Q Consensus 147 ----~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~---~-~~--r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~ 216 (355)
...++.+..+..+|.|+.-+....+-+|-++ + +. +...+.++....++|..++..+..++-++. +|.+.
T Consensus 148 s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~-~w~lg 226 (571)
T KOG1237|consen 148 SKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNV-GWKLG 226 (571)
T ss_pred chHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcc-cceee
Confidence 2355666677778899999999999999987 3 22 236788889999999999999888887776 99999
Q ss_pred HHhHHHHHHHHHHHHhh
Q 018453 217 YGASTPLAVIMGMGMWW 233 (355)
Q Consensus 217 ~~~~~~~~~~~~~~~~~ 233 (355)
|.+..++.++++++++.
T Consensus 227 f~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 227 FGIPTVLNALAILIFLP 243 (571)
T ss_pred ccHHHHHHHHHHHHHHc
Confidence 99988887776655443
No 258
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.01 E-value=0.022 Score=53.33 Aligned_cols=117 Identities=16% Similarity=0.142 Sum_probs=88.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHh---h---h----hHHHHHHHHHHHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL---A---P----DFIIMVVGRFVFG 158 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~---~---~----~~~~~~~~r~l~G 158 (355)
-|+++...|..-+.-.+..+.+.....++.+|+|..+.-+++.....++..++.. . + +...++.+-.+.-
T Consensus 288 ~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR 367 (432)
T PF06963_consen 288 QGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSR 367 (432)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHH
Confidence 5999999999999999999999999999999999988877776655444433322 1 1 2344445555555
Q ss_pred HHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 018453 159 IGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSL 205 (355)
Q Consensus 159 ~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 205 (355)
+|.=+.--...-++.|..|+++||...|.-....++--++...+.-.
T Consensus 368 ~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii 414 (432)
T PF06963_consen 368 IGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTII 414 (432)
T ss_pred HHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 65555666777889999999999999999988888877776665443
No 259
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.00 E-value=0.0016 Score=59.96 Aligned_cols=147 Identities=17% Similarity=0.055 Sum_probs=93.4
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHH-hh---hhHHHHHHHHHHHHHHHhhH
Q 018453 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGR-RRELILAALLYLVGALVTA-LA---PDFIIMVVGRFVFGIGIGLA 164 (355)
Q Consensus 90 ~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~~~~l~~~~~~~~~-~~---~~~~~~~~~r~l~G~~~g~~ 164 (355)
|++....|++.....++.++++.+.|.+.||... |...++......++.+... +. .+.+.++..-.+.|.+..+.
T Consensus 297 gY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~ 376 (480)
T KOG2563|consen 297 GYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGY 376 (480)
T ss_pred cCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCC
Confidence 5566788999999999999999999999999865 5555555555555532222 21 12344555566778877778
Q ss_pred HhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccc--chhH-HHHhHHHHHHHHHHHHhhccc
Q 018453 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVA--GWRY-MYGASTPLAVIMGMGMWWLPA 236 (355)
Q Consensus 165 ~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~--~w~~-~~~~~~~~~~~~~~~~~~~~e 236 (355)
.|...-+-.|..-|..-+...|+......+-+++-..+.+...+..+ +|.. .-+.....+++..++..++++
T Consensus 377 ~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~ 451 (480)
T KOG2563|consen 377 LPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRP 451 (480)
T ss_pred CCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhh
Confidence 88877777787655555677777766666556666666666665542 2333 333334444444444445443
No 260
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.95 E-value=0.31 Score=45.85 Aligned_cols=132 Identities=6% Similarity=-0.119 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHh------h--h----hHHHH---HHHHHHHHHH
Q 018453 96 IGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL------A--P----DFIIM---VVGRFVFGIG 160 (355)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~------~--~----~~~~~---~~~r~l~G~~ 160 (355)
.+...-.-.+..++.++..|.+.||..|.+.+-.+.+..-++..+.+. . . +.+.. ++.-.+.|..
T Consensus 40 ~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i 119 (432)
T PF06963_consen 40 VSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAI 119 (432)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHH
Confidence 344444555677788888999999999988877666554433332221 1 1 11111 2222222221
Q ss_pred HhhHHhHHHH--HHHhh----c--CCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHH
Q 018453 161 IGLAMHAAPM--YIAET----A--PTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM 229 (355)
Q Consensus 161 ~g~~~~~~~~--~~~e~----~--~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~ 229 (355)
.- ....... .=-|| . +++...+.++...-.--+.-+++|++.|.+.+.. +.+....+.++..++.++
T Consensus 120 ~~-Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~-s~~~~~~~i~~~N~~S~~ 194 (432)
T PF06963_consen 120 ER-LASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFA-SPVIAAIFIAGWNLASVF 194 (432)
T ss_pred HH-HHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CHHHHHHHHHHHHHHHHH
Confidence 11 1111111 11223 2 3455667777777788888999999999998876 788777777766666544
No 261
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.90 E-value=0.0027 Score=54.59 Aligned_cols=84 Identities=24% Similarity=0.463 Sum_probs=64.6
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHhhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL---APDFIIMVVGRFVFGIGIGLAM 165 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~r~l~G~~~g~~~ 165 (355)
|+....++|.+...-.-..++.+.+.|.+.|+-|||+. ++...+..+++.. ++.+..++++|.+-|+..+..+
T Consensus 67 YgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKra----cvtycitYiLsCiTKhSpqYkVLmVGR~LGGiaTsLLF 142 (454)
T KOG4332|consen 67 YGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRA----CVTYCITYILSCITKHSPQYKVLMVGRVLGGIATSLLF 142 (454)
T ss_pred cCccCCccceeeecccchHHHHHHHHHHHHhhhccccc----eeeehHHHHHHHHhhcCCceEEEeehhhhhhHHHHHHH
Confidence 77788888887777777778888889999999999995 4444444554444 4668899999999999999888
Q ss_pred hHHHHH-HHhhc
Q 018453 166 HAAPMY-IAETA 176 (355)
Q Consensus 166 ~~~~~~-~~e~~ 176 (355)
...-++ +.|.-
T Consensus 143 SaFEsWliaEHn 154 (454)
T KOG4332|consen 143 SAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHHhh
Confidence 887775 45544
No 262
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=96.86 E-value=0.46 Score=45.47 Aligned_cols=117 Identities=11% Similarity=0.055 Sum_probs=77.9
Q ss_pred ChhHHHHHHHHHHH-HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh--h-----------------------
Q 018453 92 SSVEIGLITSGSLY-GALIGSILAFNIADILGRRRELILAALLYLVGALVTALA--P----------------------- 145 (355)
Q Consensus 92 s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~--~----------------------- 145 (355)
+.+...++-....+ +.++...+..+++++++|.+.+-+..........+.++. +
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 44555555443333 556667788999999999998877666655555544442 1
Q ss_pred ------hHHHHHHHHHHHHHHHhhHHh-HHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 018453 146 ------DFIIMVVGRFVFGIGIGLAMH-AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (355)
Q Consensus 146 ------~~~~~~~~r~l~G~~~g~~~~-~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 208 (355)
+.|...+...+.-+-.....+ .-..+.+|.++.++-.+..+++..+.++|.+++..+...+..
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112222222222222222223 457789999999999999999999999999999998888776
No 263
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=96.71 E-value=0.088 Score=48.45 Aligned_cols=87 Identities=10% Similarity=0.026 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHH----HHhhccccchhHHHHhHHH
Q 018453 147 FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIG----SLLVDLVAGWRYMYGASTP 222 (355)
Q Consensus 147 ~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~----~~l~~~~~~w~~~~~~~~~ 222 (355)
+...++.-.+.+++.|..........++ +|++.-...+ .+.++++++..++. ....+...+-..-|.+..+
T Consensus 117 f~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqavm----~G~a~aG~l~Sl~~i~tka~~~~~~~sA~~yF~~s~~ 191 (406)
T KOG1479|consen 117 FLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQAVM----SGQALAGTLTSLLRILTKAAFSDSRTSALIYFITSTV 191 (406)
T ss_pred HHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHHHHH----hcchhHhHHHHHHHHHHHHhcCCCCceeehhHHHHHH
Confidence 5555666677788877777776666554 5655543333 33333333333322 2222222233445556666
Q ss_pred HHHHHHHHHhhcccch
Q 018453 223 LAVIMGMGMWWLPASP 238 (355)
Q Consensus 223 ~~~~~~~~~~~~~esp 238 (355)
+.+++++....+|+.|
T Consensus 192 ~~llC~i~y~~l~~lp 207 (406)
T KOG1479|consen 192 ILLLCFVLYLVLPKLP 207 (406)
T ss_pred HHHHHHHHHHHhhcch
Confidence 6666666666667665
No 264
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=96.64 E-value=0.093 Score=47.69 Aligned_cols=138 Identities=14% Similarity=0.076 Sum_probs=87.6
Q ss_pred HHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHH-----HhccHHHHHH-HHH
Q 018453 59 LGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIAD-----ILGRRRELIL-AAL 132 (355)
Q Consensus 59 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d-----r~Grr~~~~~-~~~ 132 (355)
+-+...|.-.+... .+|.+.+. -|.|.++.+....++.= ..-.+++..+.| |+||||.-++ +..
T Consensus 38 ~LYllQGiP~GL~~-~iP~lL~a-------k~vSyt~~a~fS~ay~P--~sLKllWaPiVDs~y~k~~GrrksWvvp~q~ 107 (510)
T KOG3574|consen 38 FLYLLQGIPLGLIG-AIPLLLQA-------KGVSYTSQAIFSFAYWP--FSLKLLWAPIVDSVYSKRFGRRKSWVVPCQY 107 (510)
T ss_pred HHHHHcCCchhHhh-hhHHHhcC-------CCcchhhhhhhhhhhhH--HHHHHHHHhhhHHHHHHhhccccceeeehHH
Confidence 33456666666666 77777774 47777776665444321 223446666777 9999987554 333
Q ss_pred HHHHHHHHHHhh-----------hhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHH
Q 018453 133 LYLVGALVTALA-----------PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYG 201 (355)
Q Consensus 133 l~~~~~~~~~~~-----------~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~ 201 (355)
+.+..+++.+.. ++...+....++.-+..+.--.++-.+.-.+..+++.|.+......+...|.+++..
T Consensus 108 llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ 187 (510)
T KOG3574|consen 108 LLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNV 187 (510)
T ss_pred HHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcc
Confidence 333333333321 233344445566667777777777778888888999999988888888888888776
Q ss_pred HHHHh
Q 018453 202 IGSLL 206 (355)
Q Consensus 202 i~~~l 206 (355)
+--.+
T Consensus 188 ifLaL 192 (510)
T KOG3574|consen 188 VFLAL 192 (510)
T ss_pred eeeEe
Confidence 64433
No 265
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=96.62 E-value=0.051 Score=51.11 Aligned_cols=146 Identities=12% Similarity=0.009 Sum_probs=78.7
Q ss_pred HHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHH--HHHHHHHHH-HHHHHHHHhccHHHHHHH-HH
Q 018453 57 PALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGS--LYGALIGSI-LAFNIADILGRRRELILA-AL 132 (355)
Q Consensus 57 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~--~~~~~~~~~-~~g~l~dr~Grr~~~~~~-~~ 132 (355)
+.+-++..|.-.+......|.+.++.. .+.|.++.+.+.-+. +--=++.++ +=.....|+||||.-++- -.
T Consensus 5 L~~LY~lQGiP~GL~~gsiPflL~~~~-----~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~ 79 (544)
T PF13000_consen 5 LVLLYFLQGIPLGLAFGSIPFLLQSMA-----KKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPIQY 79 (544)
T ss_pred HHHHHHHcCcccccccccchhhhcccc-----CCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhHHHH
Confidence 344456667777666556777766311 266777766553321 111123333 233446689999876652 23
Q ss_pred HHHHHHHHHHhhh------------------------hHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHH
Q 018453 133 LYLVGALVTALAP------------------------DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLK 188 (355)
Q Consensus 133 l~~~~~~~~~~~~------------------------~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~ 188 (355)
+.++.++..+... +...+....++.=+-.+.--.++-.+.-.+..+++++.+....
T Consensus 80 l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcq 159 (544)
T PF13000_consen 80 LSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQ 159 (544)
T ss_pred HHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHH
Confidence 3333333332211 0112222232333334444445555666677888899888888
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 018453 189 EFFIVLGMVGGYGIGSLLV 207 (355)
Q Consensus 189 ~~~~~~g~~~~~~i~~~l~ 207 (355)
..+.++|.+++..+--.+.
T Consensus 160 tvG~~~Gyfls~tvFlaln 178 (544)
T PF13000_consen 160 TVGQTAGYFLSFTVFLALN 178 (544)
T ss_pred HhHhhhhHHHHHHHHHhhC
Confidence 8888888887766655444
No 266
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.30 E-value=0.21 Score=47.24 Aligned_cols=109 Identities=14% Similarity=0.095 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccH--HHHH--HHHHHHHHHHHHHHhh---------hhHHHHHHHHHHHHHHHhh
Q 018453 97 GLITSGSLYGALIGSILAFNIADILGRR--RELI--LAALLYLVGALVTALA---------PDFIIMVVGRFVFGIGIGL 163 (355)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~g~l~dr~Grr--~~~~--~~~~l~~~~~~~~~~~---------~~~~~~~~~r~l~G~~~g~ 163 (355)
-.....+++|-.+|..+..+.. .-++| ..++ +.-++.+...+++..- ++-+..++..++.|+..|-
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 4557778888888888554431 11222 2222 2223333333333221 3455666779999999999
Q ss_pred HHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 018453 164 AMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL 206 (355)
Q Consensus 164 ~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 206 (355)
..+....+..+..++++|..+..+...+..+|..+|..++-.+
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988876543
No 267
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.38 E-value=0.0043 Score=60.13 Aligned_cols=150 Identities=15% Similarity=0.223 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHH-HHHHHHHHHHHHHHHhc--cHHHHHHHH
Q 018453 55 LFPALGGLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLY-GALIGSILAFNIADILG--RRRELILAA 131 (355)
Q Consensus 55 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~G--rr~~~~~~~ 131 (355)
+...++.....+........+|.+.+.+ |++++++++++..+..+ +.++|.+++|++..|+. .|..+.+..
T Consensus 308 ~~~~la~~~~~~~~~G~~tF~pKylE~Q------F~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~ 381 (539)
T PF03137_consen 308 MCLILAGVFESFIVSGFATFLPKYLESQ------FGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCI 381 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH------hCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHH
Confidence 4555666666667777788899988842 89999999988876665 66889999999999874 344444444
Q ss_pred HHHHHHHHHH---Hh--hh-------------------------------------------------hHHHHHHHHHHH
Q 018453 132 LLYLVGALVT---AL--AP-------------------------------------------------DFIIMVVGRFVF 157 (355)
Q Consensus 132 ~l~~~~~~~~---~~--~~-------------------------------------------------~~~~~~~~r~l~ 157 (355)
+...++.++. .+ ++ .+..+++..++.
T Consensus 382 v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~ 461 (539)
T PF03137_consen 382 VVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFIL 461 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHH
Confidence 4443333321 11 00 012222333333
Q ss_pred HHHHhhHHhHHHHHHHhhcCCCchhHHHHHHH-HHHHHHHHHHHHHHHHhhccc
Q 018453 158 GIGIGLAMHAAPMYIAETAPTPMRGQLISLKE-FFIVLGMVGGYGIGSLLVDLV 210 (355)
Q Consensus 158 G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~-~~~~~g~~~~~~i~~~l~~~~ 210 (355)
-+..+...+.....+-.-.|+++|+.++|+.. ....+|.+-||++-|.++|..
T Consensus 462 ~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 462 SFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp ------------------------------------------------------
T ss_pred HHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 33334444444555667788889999999875 445567788888888877653
No 268
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=95.36 E-value=0.011 Score=55.75 Aligned_cols=77 Identities=21% Similarity=0.227 Sum_probs=59.0
Q ss_pred HHHhhhhhcccccccccccCCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH-HHHHHHHHHH
Q 018453 61 GLLYGYDIGSTSCATISIESPTLSGISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELIL-AALLYLVGAL 139 (355)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~-~~~l~~~~~~ 139 (355)
++.++...+.+.+.++.+... +|+++.+.|.++..--+..+++.+++|.++||+.+|+.+++ +.++.+...+
T Consensus 20 ~~~~~~~~g~l~pll~vy~kQ-------LGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~f 92 (618)
T KOG3762|consen 20 YLFFGARFGSLFPLLAVYFKQ-------LGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATF 92 (618)
T ss_pred eeeeeecccccchHHHHHHHH-------cCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 344455556666667766665 89999999999999999999999999999999988766665 4555556666
Q ss_pred HHHhh
Q 018453 140 VTALA 144 (355)
Q Consensus 140 ~~~~~ 144 (355)
+..+.
T Consensus 93 ll~fv 97 (618)
T KOG3762|consen 93 LLVFV 97 (618)
T ss_pred heeec
Confidence 55554
No 269
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=95.32 E-value=0.018 Score=53.43 Aligned_cols=125 Identities=19% Similarity=0.193 Sum_probs=72.1
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------HHHHHHHHHHH----HHHHHHHHhhh-hHHHHHHHHHHH
Q 018453 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGR-------RRELILAALLY----LVGALVTALAP-DFIIMVVGRFVF 157 (355)
Q Consensus 90 ~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-------r~~~~~~~~l~----~~~~~~~~~~~-~~~~~~~~r~l~ 157 (355)
|.+.....++..+...+..+|.+++|.++||+-| .+.=.+...+. +...++....+ ....+.+..++.
T Consensus 279 ~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~ 358 (493)
T KOG1330|consen 279 GFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLV 358 (493)
T ss_pred CCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 3345555677788888889999999999999432 11111111111 11111222122 222333344555
Q ss_pred HHHHhhH-HhHHHHHHHhhcCCCchhHHHHHHHHHH-HHHHHHHHHHHHHhhccccchh
Q 018453 158 GIGIGLA-MHAAPMYIAETAPTPMRGQLISLKEFFI-VLGMVGGYGIGSLLVDLVAGWR 214 (355)
Q Consensus 158 G~~~g~~-~~~~~~~~~e~~~~~~r~~~~~~~~~~~-~~g~~~~~~i~~~l~~~~~~w~ 214 (355)
|...... .........|..|+++|..+.++..... .+|.+-+|.+.|.+.+..-+|+
T Consensus 359 g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 359 GETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred HHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 5543332 3344456688889999999999975544 4455555557787776655666
No 270
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=94.83 E-value=0.045 Score=51.73 Aligned_cols=73 Identities=16% Similarity=0.143 Sum_probs=58.3
Q ss_pred HHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHH
Q 018453 155 FVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMG 228 (355)
Q Consensus 155 ~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~ 228 (355)
++.|++.-.......+.-+|...+++.+.+.++++....++.++||++...+.... |.|+...+.+...++..
T Consensus 396 ~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~-g~~~v~~~~~~~~l~~~ 468 (488)
T KOG2325|consen 396 VVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLS-GPRPVWIILLCLLLVVA 468 (488)
T ss_pred heeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhc-CccHHHHHHHHHHHHHH
Confidence 45666655556667788899999999999999999999999999999998888776 88877776665554433
No 271
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=94.66 E-value=0.51 Score=43.54 Aligned_cols=131 Identities=18% Similarity=0.045 Sum_probs=85.6
Q ss_pred ccccccccCCCCCCCccccCChhHHHHHHHH-HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH-------h
Q 018453 72 SCATISIESPTLSGISWYDLSSVEIGLITSG-SLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA-------L 143 (355)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~-~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~-------~ 143 (355)
-.+.|.+..+...+. ..++...-++... ++++..+|.+...++.++=.|+..+....=+..+..+..+ +
T Consensus 263 LsiFPg~~~~~~~~~---~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~ 339 (406)
T KOG1479|consen 263 LSIFPGFCSEVKSSG---LLGDWYALLLVFLSFNVFDLIGSILAALLTWPDPRKLTIPVLLRLLFIPLFLLCNYPPLPVV 339 (406)
T ss_pred eEecchhhcccccCc---ccchhhHHHHHHHHhHHHHHhhhhhhhcccCCCCceehHHHHHHHHHHHHHHHhccCCCCce
Confidence 334555555432211 1133344455566 8889999977777665544444333333333333333322 2
Q ss_pred hhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 018453 144 APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSL 205 (355)
Q Consensus 144 ~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 205 (355)
-.+-+.+++...+.|+..|-...+.+.+..+-.|++++-.+..+.......|.+.|..++..
T Consensus 340 ~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~l 401 (406)
T KOG1479|consen 340 FESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSWV 401 (406)
T ss_pred ecCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 34567778889999999999999999999999999998888888888888888888777543
No 272
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=94.13 E-value=0.017 Score=51.92 Aligned_cols=108 Identities=21% Similarity=0.197 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHH--HHHHHHHHHHHHHh----------hhhHHHHHHHHHHHHHHHhhH
Q 018453 98 LITSGSLYGALIGSILAFNIADI-LGRRRELIL--AALLYLVGALVTAL----------APDFIIMVVGRFVFGIGIGLA 164 (355)
Q Consensus 98 ~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~~~~--~~~l~~~~~~~~~~----------~~~~~~~~~~r~l~G~~~g~~ 164 (355)
.....++++-.+|..+.++..=+ -.+|+..+. .-++.+...+++-. .++-+..++..++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 34567889999999987764211 123433332 22222222222211 233455667789999999999
Q ss_pred HhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 018453 165 MHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSL 205 (355)
Q Consensus 165 ~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 205 (355)
.+....+..+..++++|..+..+...+..+|..+|..++-.
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp -HHHH------------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999888888988888877644
No 273
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=94.07 E-value=2.5 Score=38.25 Aligned_cols=85 Identities=21% Similarity=0.262 Sum_probs=57.6
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH----HH-Hhh----hhHHHHHHHHHHHHHH
Q 018453 90 DLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGAL----VT-ALA----PDFIIMVVGRFVFGIG 160 (355)
Q Consensus 90 ~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~----~~-~~~----~~~~~~~~~r~l~G~~ 160 (355)
|-+-.+.+++.+.+...+.+|+...-++.|.--.-+.+.+-.++..++.+ +. .|+ +..+.+.++-+++|.-
T Consensus 39 G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~L 118 (508)
T COG4262 39 GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVL 118 (508)
T ss_pred CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 55567888999999999999988887776654444333333333222211 11 222 3567788889999999
Q ss_pred HhhHHhHHHHHHHh
Q 018453 161 IGLAMHAAPMYIAE 174 (355)
Q Consensus 161 ~g~~~~~~~~~~~e 174 (355)
.|...|..+.++..
T Consensus 119 VG~EiPL~mrml~~ 132 (508)
T COG4262 119 VGAEIPLLMRMLQR 132 (508)
T ss_pred HhcchHHHHHHHHH
Confidence 99999999888876
No 274
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=93.56 E-value=0.14 Score=47.77 Aligned_cols=129 Identities=16% Similarity=-0.022 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcC
Q 018453 98 LITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAP 177 (355)
Q Consensus 98 ~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~ 177 (355)
|-..++.+...+.+....++++|+|-|+.++.+.....++.-+.+..++.+.....+...|+-.+....+-...+.++.-
T Consensus 336 ~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~ 415 (498)
T KOG0637|consen 336 LGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYAI 415 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHHH
Confidence 44566777888889999999999997777777776677777777777887777788877775555443333333332221
Q ss_pred -----------------------CCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHH
Q 018453 178 -----------------------TPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (355)
Q Consensus 178 -----------------------~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~ 226 (355)
..-+|...|+.++...+..++.....|.+.+..++-+......++++++
T Consensus 416 ~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~~ 487 (498)
T KOG0637|consen 416 LGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVALL 487 (498)
T ss_pred hCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHHH
Confidence 1123555666677777777777776677776665666665555555444
No 275
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=93.53 E-value=2.9 Score=38.94 Aligned_cols=97 Identities=19% Similarity=0.156 Sum_probs=70.2
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH--HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHH
Q 018453 92 SSVEIGLITSGSLYGALIGSILAFNIADILGRRRELIL--AALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAP 169 (355)
Q Consensus 92 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~ 169 (355)
....-|.+-++..+.+.++.+..|.+..++.+..-+.+ ..++.+...++++..+|+|...++.++.+.......+.+.
T Consensus 283 ~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~ 362 (412)
T PF01770_consen 283 ESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIAS 362 (412)
T ss_pred CcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455777788888888899999998777776544443 3344455555667788999999999998888888888888
Q ss_pred HHHHhhcCCCchhHHHHHH
Q 018453 170 MYIAETAPTPMRGQLISLK 188 (355)
Q Consensus 170 ~~~~e~~~~~~r~~~~~~~ 188 (355)
.-++.....+..|...|+.
T Consensus 363 ~qIA~~l~~e~yaLVFGiN 381 (412)
T PF01770_consen 363 FQIAKNLSEERYALVFGIN 381 (412)
T ss_pred HHHHHhccccceeeeeeeH
Confidence 7777777766666555543
No 276
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=92.88 E-value=1 Score=40.32 Aligned_cols=104 Identities=18% Similarity=0.253 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcC--CCc
Q 018453 103 SLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAP--TPM 180 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~--~~~ 180 (355)
..+..+..+++.+.+..++|.|+++.++..........- +-+.+..++.+-.+.|++.+..+..-..|+.+... .+.
T Consensus 67 ~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~N-l~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~ 145 (390)
T KOG3097|consen 67 LYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAAN-LEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQ 145 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh-cchhHHhhccHHHhhccccccccccCcceecHHHHHHHHh
Confidence 334455666666689999999999887766654433211 22567888889999999999887776666655542 223
Q ss_pred h---------hHHHHHHHHHHHHHHHHHHHHHHHhh
Q 018453 181 R---------GQLISLKEFFIVLGMVGGYGIGSLLV 207 (355)
Q Consensus 181 r---------~~~~~~~~~~~~~g~~~~~~i~~~l~ 207 (355)
| .+..+.+.+++..+...|..++..+.
T Consensus 146 ~~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli~ 181 (390)
T KOG3097|consen 146 RGEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLIM 181 (390)
T ss_pred hhhhccCceeeeehhHHHHHHHHHHHHHHHHHHHHH
Confidence 3 45566666666666666655554443
No 277
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=92.79 E-value=0.19 Score=49.93 Aligned_cols=65 Identities=15% Similarity=0.082 Sum_probs=48.4
Q ss_pred ccccccccccCCCCCCCccccCChhHHHHHHHHHHH-HHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHH
Q 018453 70 STSCATISIESPTLSGISWYDLSSVEIGLITSGSLY-GALIGSILAFNIADILG--RRRELILAALLYLVGALV 140 (355)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~G--rr~~~~~~~~l~~~~~~~ 140 (355)
.....+|.+.++ .+|++..+.+++.+...+ +.+++.+++|++.||++ .|+.+.++.++.+++.++
T Consensus 348 ~~~~~lP~yl~~------~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 348 GYITFLPKYLEN------QYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHHHH------HcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 344466666652 279999999999988776 67899999999999998 456666666666666544
No 278
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=92.25 E-value=7.2 Score=34.18 Aligned_cols=135 Identities=14% Similarity=0.160 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccH--HHHHHHHHHHHHHHHHHHh----hh---hHHHHHHHHHHHHHHHhhHH
Q 018453 95 EIGLITSGSLYGALIGSILAFNIADILGRR--RELILAALLYLVGALVTAL----AP---DFIIMVVGRFVFGIGIGLAM 165 (355)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr--~~~~~~~~l~~~~~~~~~~----~~---~~~~~~~~r~l~G~~~g~~~ 165 (355)
-.|.+.+.+++..++|+-+..++..|-..| ....+..++.+....+... ++ +...-+++..+.-.+.|..+
T Consensus 283 PhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfw 362 (454)
T KOG4332|consen 283 PHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFW 362 (454)
T ss_pred CchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcc
Confidence 347889999999999999888887765543 3333333333333222221 12 23333566677778899999
Q ss_pred hHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHH
Q 018453 166 HAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMG 230 (355)
Q Consensus 166 ~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~ 230 (355)
|..+-.-.+..|.+.|...+.++-.-.++-..++-... ..-+...+-|..|-++.+...++.+.
T Consensus 363 PSimkmRsqyIPEearstimNfFRvPLnifvClvLynl-h~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 363 PSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNL-HVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred hHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheec-ccccCccccchhhhhhHHHHHHHHHH
Confidence 99999999999999999998887655444332221110 00112225678888888776665443
No 279
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=91.03 E-value=15 Score=35.17 Aligned_cols=73 Identities=11% Similarity=0.072 Sum_probs=54.7
Q ss_pred HHHHHHHHHhhHHhHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHH
Q 018453 153 GRFVFGIGIGLAMHAAPMYIAETAPT-PMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (355)
Q Consensus 153 ~r~l~G~~~g~~~~~~~~~~~e~~~~-~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~ 226 (355)
.-++.|++........-..+.+.+|. ++|+..+|.++...++..++..++.+.+.... ||.....+.-++.++
T Consensus 272 ~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~-Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 272 LVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKY-GWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHH
Confidence 33456666666676666777888764 56899999999998888878888888888887 999887765555444
No 280
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=88.66 E-value=5.2 Score=34.70 Aligned_cols=103 Identities=11% Similarity=0.028 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHH----HHHHHHHHHHHHHHh-hh----hHHHHHHHHHHHHHHHhhHHh
Q 018453 97 GLITSGSLYGALIGSILAFNIADI-LGRRRELI----LAALLYLVGALVTAL-AP----DFIIMVVGRFVFGIGIGLAMH 166 (355)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~~~----~~~~l~~~~~~~~~~-~~----~~~~~~~~r~l~G~~~g~~~~ 166 (355)
.....++..|..+|....|.+... +.||+.+. .+.++.++..++... .. +...+++.-++.|++.=+..+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 455566677777887888877754 55565544 233334444433211 11 355667777788876555555
Q ss_pred HHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHH
Q 018453 167 AAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGY 200 (355)
Q Consensus 167 ~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~ 200 (355)
+....-.|. +...+.+..-.+...+++|.++-.
T Consensus 224 ViL~lPhEy-K~~~pk~ig~~Fg~iWGfGY~~yT 256 (267)
T PF07672_consen 224 VILNLPHEY-KGYNPKKIGIQFGLIWGFGYIFYT 256 (267)
T ss_pred HHhcChhhh-cCCCcceehhHHHHHHHHHHHHHH
Confidence 544444443 222222333334555555554433
No 281
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=86.11 E-value=3.7 Score=29.98 Aligned_cols=26 Identities=8% Similarity=-0.045 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018453 96 IGLITSGSLYGALIGSILAFNIADIL 121 (355)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~g~l~dr~ 121 (355)
.++-.+.-+++.++.....||+.|+|
T Consensus 44 ~a~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 44 QAFKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34445666777777777889999997
No 282
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=85.24 E-value=7.6 Score=29.07 Aligned_cols=40 Identities=35% Similarity=0.627 Sum_probs=24.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Q 018453 94 VEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALL 133 (355)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l 133 (355)
...+.......++..++..+.+.+.|..|.+..+.+...+
T Consensus 87 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (141)
T TIGR00880 87 VALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAIL 126 (141)
T ss_pred HHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHH
Confidence 3445555666667777777777777766665554444333
No 283
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=85.24 E-value=37 Score=32.73 Aligned_cols=72 Identities=13% Similarity=0.091 Sum_probs=51.9
Q ss_pred HHHHHHHHHhhHHhHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHH
Q 018453 153 GRFVFGIGIGLAMHAAPMYIAETAPT-PMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAV 225 (355)
Q Consensus 153 ~r~l~G~~~g~~~~~~~~~~~e~~~~-~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~ 225 (355)
.-+..|++........-..+.+.+|. +.+...+|-++...++-..+...+++.+.... ||+....+.=++++
T Consensus 288 lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~-GW~~~AlitPiv~l 360 (491)
T PF03219_consen 288 LVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRF-GWRTAALITPIVIL 360 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHhHHHHH
Confidence 33456666666666666677777754 55788888888888888888888888888887 99987776433333
No 284
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=84.34 E-value=13 Score=35.63 Aligned_cols=62 Identities=15% Similarity=0.131 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 018453 149 IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210 (355)
Q Consensus 149 ~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 210 (355)
.+++..++..+..-..++..+++-+.+.+|..=|+.|.+.++..++|+-.-..+.-++++..
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~f 468 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYF 468 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhc
Confidence 44456677778888889999999999999999999999999999998766666655555544
No 285
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=84.24 E-value=6 Score=35.36 Aligned_cols=111 Identities=13% Similarity=-0.008 Sum_probs=74.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH---HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHH
Q 018453 94 VEIGLITSGSLYGALIGSILAFNIADILGRRRELIL---AALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPM 170 (355)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~ 170 (355)
.|+-|....+.+|-.+..--...+.-+ .-+.+.+ -.++..+.-.+..+.++++..++.-+.-|+-.|..++-..-
T Consensus 288 sqYRwyqvlYQlGVFiSRSS~~~~~~p--~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~ 365 (409)
T KOG3880|consen 288 SQYRWYQVLYQLGVFISRSSINLFTMP--YLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFH 365 (409)
T ss_pred hcchhhheeeeeeEEEEeccceEEech--HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHH
Confidence 456788888777765544322211111 1111111 11122222233445688898888999999988888888888
Q ss_pred HHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 018453 171 YIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL 206 (355)
Q Consensus 171 ~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 206 (355)
-+.+-.++++|-.+++.......+|..++..++-.+
T Consensus 366 ~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 366 NIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 888888899999999999999999999988876544
No 286
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=83.68 E-value=0.8 Score=40.61 Aligned_cols=133 Identities=12% Similarity=0.027 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhh
Q 018453 96 IGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAET 175 (355)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~ 175 (355)
.|.+.-+-.+-..+..+....+.||+.--.-+.+..++.+.++++.+++++.++-+.+-.+..++.|.....-..+. ..
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~ls-s~ 142 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALS-SR 142 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhh-cc
Confidence 45555566677778888888899987554445667778888888889999999988888888888886655544332 22
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhc-cccchhHHHHhHHHHHHHHHHHHhh
Q 018453 176 APTPMRGQLISLKEFFIVLGMVGGYGIGSLLVD-LVAGWRYMYGASTPLAVIMGMGMWW 233 (355)
Q Consensus 176 ~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~-~~~~w~~~~~~~~~~~~~~~~~~~~ 233 (355)
+++ ...+.+..+.+.++++|..--..+.+ ...+.|.++++...+.++.....++
T Consensus 143 Y~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~ 197 (409)
T KOG3880|consen 143 YPS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFF 197 (409)
T ss_pred CCC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHh
Confidence 332 22344444444455555443333333 1126788888777666655544444
No 287
>PRK10263 DNA translocase FtsK; Provisional
Probab=83.02 E-value=44 Score=35.99 Aligned_cols=26 Identities=23% Similarity=-0.091 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHhhccccchhHHHHhH
Q 018453 194 LGMVGGYGIGSLLVDLVAGWRYMYGAS 220 (355)
Q Consensus 194 ~g~~~~~~i~~~l~~~~~~w~~~~~~~ 220 (355)
.|+++|.+++..+.... |.....++.
T Consensus 142 gGGIIG~lLs~lL~~Lf-G~vGa~LIL 167 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLL-HSSGGTIAL 167 (1355)
T ss_pred ccchHHHHHHHHHHHHH-hHHHHHHHH
Confidence 46666666666555444 444444333
No 288
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=82.35 E-value=8.4 Score=36.85 Aligned_cols=93 Identities=14% Similarity=0.113 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH--HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHh
Q 018453 97 GLITSGSLYGALIGSILAFNIADILGRRRELI--LAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAE 174 (355)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e 174 (355)
|.+-++..+...+..+..|++-.++.+---+. +..++.+...++++..+|+|..+++.++.+.......+++..-++.
T Consensus 301 G~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~ 380 (511)
T TIGR00806 301 GAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIAS 380 (511)
T ss_pred CHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555666677778888888876665432333 3444444555566777899999999999999999999999999998
Q ss_pred hcCCCchhHHHHHHH
Q 018453 175 TAPTPMRGQLISLKE 189 (355)
Q Consensus 175 ~~~~~~r~~~~~~~~ 189 (355)
....+..|...|+..
T Consensus 381 ~L~~~~~aLvFGiNt 395 (511)
T TIGR00806 381 SLSKELCALVFGINT 395 (511)
T ss_pred HhcccceEEEEecHH
Confidence 888777776666643
No 289
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=82.25 E-value=1.8 Score=37.50 Aligned_cols=56 Identities=13% Similarity=0.064 Sum_probs=35.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHh---h-ccccchhHHHHhHHHHHHHHHHHHhhc
Q 018453 179 PMRGQLISLKEFFIVLGMVGGYGIGSLL---V-DLVAGWRYMYGASTPLAVIMGMGMWWL 234 (355)
Q Consensus 179 ~~r~~~~~~~~~~~~~g~~~~~~i~~~l---~-~~~~~w~~~~~~~~~~~~~~~~~~~~~ 234 (355)
|+|+....+...++++|.++....-..- . ....+|++++.+.+++.++.++++.++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4566666666777788877665442211 0 111279999998888877766665554
No 290
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=80.66 E-value=62 Score=31.94 Aligned_cols=83 Identities=13% Similarity=0.147 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHHHHhhh-----------------hHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHH
Q 018453 127 LILAALLYLVGALVTALAP-----------------DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKE 189 (355)
Q Consensus 127 ~~~~~~l~~~~~~~~~~~~-----------------~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~ 189 (355)
+-+|+++.++.+...+... +.++++--.++.|++.....+...-+..+-+|++.|+.+.+++.
T Consensus 421 ig~G~~~si~sm~~aa~vE~krl~~~~~~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l 500 (571)
T KOG1237|consen 421 IGIGLVLSILSMAVAGIVEAKRLKTAVSLLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWL 500 (571)
T ss_pred eeccchHHHHHHHHHHHHHHHHhhhhhhccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHH
Confidence 3466777777766665521 24566677789999999998888888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcc
Q 018453 190 FFIVLGMVGGYGIGSLLVDL 209 (355)
Q Consensus 190 ~~~~~g~~~~~~i~~~l~~~ 209 (355)
...++|..+...+.......
T Consensus 501 ~t~a~G~~lss~Lv~~v~~~ 520 (571)
T KOG1237|consen 501 LTVAVGNYLSSVLVSLVQFS 520 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999988665543
No 291
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=80.56 E-value=33 Score=28.70 Aligned_cols=39 Identities=23% Similarity=0.119 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHHHH---HHhccHHHHHHHHHHHHHHH
Q 018453 100 TSGSLYGALIGSILAFNIA---DILGRRRELILAALLYLVGA 138 (355)
Q Consensus 100 ~~~~~~~~~~~~~~~g~l~---dr~Grr~~~~~~~~l~~~~~ 138 (355)
.....+++++|..+.+.+. ++..+|+.....+.+..+..
T Consensus 52 ~~~~i~~F~~G~~~~~~i~~~~~~~~~~~~~~~~l~~~~~ll 93 (209)
T PF06912_consen 52 YLLAILSFILGAFLAGLIVRRSRRRRRRRWYRILLLLEAILL 93 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH
Confidence 3444455566666666662 23334444444444433333
No 292
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=80.31 E-value=0.54 Score=42.26 Aligned_cols=79 Identities=11% Similarity=-0.053 Sum_probs=0.0
Q ss_pred HHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHH---hhccccchh--HHHHhHHHHHHHHHH
Q 018453 155 FVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSL---LVDLVAGWR--YMYGASTPLAVIMGM 229 (355)
Q Consensus 155 ~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~---l~~~~~~w~--~~~~~~~~~~~~~~~ 229 (355)
++.|++.+........+.+. +|++. +..+..+.++++++..++.-. ..+.. .+. ..|.+..++.+++++
T Consensus 5 ~~~~~~~~~~q~s~~glas~-~p~~y----~~a~~~Gq~~aGv~~s~l~ii~~~~~~~~-~~~a~~yF~~a~~i~i~~~~ 78 (309)
T PF01733_consen 5 ALIGFANAVLQSSLFGLASL-FPPKY----TQAVMIGQGLAGVIVSLLRIITKASGSDV-KTSAFIYFIIAVLIVILCII 78 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEHhhhHHHhccHHHHHhc-CCHHH----HHHHHhhccHHHHHHHHHHHHHHHhhhcc-chhhhhHHHHHHHHHHHHHH
Confidence 45566666666666666664 56544 334445555555554443321 11111 122 233334444444555
Q ss_pred HHhhcccchh
Q 018453 230 GMWWLPASPR 239 (355)
Q Consensus 230 ~~~~~~esp~ 239 (355)
.++.++.+|.
T Consensus 79 ~~~~l~~~~~ 88 (309)
T PF01733_consen 79 LYFILPRSPF 88 (309)
T ss_dssp ----------
T ss_pred HHHHhccChH
Confidence 5555666553
No 293
>PHA03237 envelope glycoprotein M; Provisional
Probab=79.02 E-value=36 Score=31.84 Aligned_cols=33 Identities=21% Similarity=0.276 Sum_probs=16.4
Q ss_pred hhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhc
Q 018453 144 APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETA 176 (355)
Q Consensus 144 ~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~ 176 (355)
++|+...+.--.+.++..-...+.....+.|.+
T Consensus 248 gNsF~v~~~~~v~~ai~~F~vl~iiyliv~E~v 280 (424)
T PHA03237 248 ANSFHLTLWQTITVAIGVFVALTLMYLLIVEFV 280 (424)
T ss_pred hcceeeehhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345444333334444444445555566666665
No 294
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=77.63 E-value=26 Score=25.93 Aligned_cols=48 Identities=8% Similarity=0.059 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcC
Q 018453 130 AALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAP 177 (355)
Q Consensus 130 ~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~ 177 (355)
..++..+++++.++......---.|.+.+.|..+.++...++..|...
T Consensus 32 Tl~vNi~G~fllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~ 79 (108)
T PRK14229 32 TLIANLLGCFLIGVFYNHVESKEVYAILATGFCGGLTTFSTLNDELQR 79 (108)
T ss_pred HHHHHHHHHHHHHHHHHHcccHHHHHHHHhhHccccccHHHHHHHHHH
Confidence 344455555555543221110113445555555566777777777664
No 295
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=76.46 E-value=12 Score=32.53 Aligned_cols=23 Identities=9% Similarity=0.277 Sum_probs=11.9
Q ss_pred HHHHhHHHHHHHHHHHHhhcccc
Q 018453 215 YMYGASTPLAVIMGMGMWWLPAS 237 (355)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~es 237 (355)
+.=++..++.++...++.+++.+
T Consensus 116 ~Ln~~G~~l~~~~~~~f~fik~~ 138 (254)
T PF07857_consen 116 WLNYIGVALVLVSGIIFSFIKSE 138 (254)
T ss_pred HHHHHHHHHHHHHHHheeeecCC
Confidence 34445555555565555555443
No 296
>PHA03242 envelope glycoprotein M; Provisional
Probab=75.39 E-value=73 Score=29.90 Aligned_cols=52 Identities=13% Similarity=0.137 Sum_probs=22.9
Q ss_pred hhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCC----CchhHHHHHHHHHHHHH
Q 018453 144 APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPT----PMRGQLISLKEFFIVLG 195 (355)
Q Consensus 144 ~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~----~~r~~~~~~~~~~~~~g 195 (355)
++|+...+.--.+..+..-...++....+.|.+-. ..-|...|.+-....+|
T Consensus 245 gNsF~v~~~~~v~~ai~~F~vL~ii~liv~E~vL~~Yv~vl~G~~lG~lia~~~l~ 300 (428)
T PHA03242 245 ANNFHLSLPGTLVCLTAVFALLVVLLLVVVEGVLSHYVRVLPGPHLGALVAAGIVG 300 (428)
T ss_pred hcceeeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHH
Confidence 34443333333333444444455555555665432 33455554444433333
No 297
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=73.66 E-value=37 Score=31.29 Aligned_cols=34 Identities=12% Similarity=0.093 Sum_probs=16.3
Q ss_pred hhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcC
Q 018453 144 APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAP 177 (355)
Q Consensus 144 ~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~ 177 (355)
.+|+.....--.+..+..-...+.....+.|.+-
T Consensus 231 gNsF~v~~~~~v~~ai~~F~vl~ii~~i~~E~~L 264 (374)
T PF01528_consen 231 GNSFYVSVSDMVFGAINVFAVLSIIYLIVIEVVL 264 (374)
T ss_pred hcceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444443333333344444445555666666653
No 298
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=73.21 E-value=32 Score=27.21 Aligned_cols=51 Identities=18% Similarity=0.324 Sum_probs=32.6
Q ss_pred hHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHH
Q 018453 146 DFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGG 199 (355)
Q Consensus 146 ~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~ 199 (355)
++..++....++|+|. ..+.+.+++-...+++-|..+|+-..-.+++.+.-
T Consensus 96 ~~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 96 PWAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLLGWEEFKRNWGRMWE 146 (153)
T ss_pred chHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHHH
Confidence 4455555555555543 23334455566677888999999888888776543
No 299
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=70.84 E-value=1e+02 Score=29.62 Aligned_cols=78 Identities=21% Similarity=0.149 Sum_probs=54.1
Q ss_pred HHHHHHHHHHhhHHhHHHHHHHhhcCC-CchhHHHHHHHHHHHHH-HHHHHHHHHHhhccccchhHHHHhHHHHHHHHHH
Q 018453 152 VGRFVFGIGIGLAMHAAPMYIAETAPT-PMRGQLISLKEFFIVLG-MVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGM 229 (355)
Q Consensus 152 ~~r~l~G~~~g~~~~~~~~~~~e~~~~-~~r~~~~~~~~~~~~~g-~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~ 229 (355)
..-...|++........-.-+.+.+|. +.+...+|-++...++- .++...+++.++... ||-+.-.+.=++.++..+
T Consensus 289 l~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~-GW~~~AlitPiv~litg~ 367 (509)
T COG3202 289 LLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRV-GWFTGALITPLVMLITGV 367 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHh-hHHHHHHHHHHHHHHHHH
Confidence 333456666666666666667788764 44888888888888877 666677778888877 998877766555555433
Q ss_pred H
Q 018453 230 G 230 (355)
Q Consensus 230 ~ 230 (355)
+
T Consensus 368 l 368 (509)
T COG3202 368 L 368 (509)
T ss_pred H
Confidence 3
No 300
>PRK14233 camphor resistance protein CrcB; Provisional
Probab=67.32 E-value=56 Score=25.23 Aligned_cols=74 Identities=18% Similarity=0.243 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHhhhhHHHH-------HHHHHHHHHHHhhHHhHHHHHH
Q 018453 103 SLYGALIGSILAFNIADILGRR---RELILAALLYLVGALVTALAPDFIIM-------VVGRFVFGIGIGLAMHAAPMYI 172 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr~Grr---~~~~~~~~l~~~~~~~~~~~~~~~~~-------~~~r~l~G~~~g~~~~~~~~~~ 172 (355)
..+|..+|+..=-.++..+.++ ..-....++..+++++.++...+..- --.|.+.+.|.-+.++.-.++.
T Consensus 9 V~~Gg~~GA~lRy~l~~~~~~~~~~~fP~gTl~VNv~G~fllG~l~~~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~ 88 (133)
T PRK14233 9 VLVGGFIGGVMRFFLSGYVGRRIGETFPWGTFVVNVSGAFVIGTAAGLGARLGGIFSTTIFHEFIMVGLLGGYTTVSSFC 88 (133)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcccCCCchHHHHHHHHHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHccccccHHHHH
Confidence 4456666666443333333221 11123444555666655543322110 1134555555555666777777
Q ss_pred Hhhc
Q 018453 173 AETA 176 (355)
Q Consensus 173 ~e~~ 176 (355)
.|..
T Consensus 89 ~E~~ 92 (133)
T PRK14233 89 LQSV 92 (133)
T ss_pred HHHH
Confidence 7765
No 301
>PRK14230 camphor resistance protein CrcB; Provisional
Probab=65.96 E-value=55 Score=24.70 Aligned_cols=74 Identities=12% Similarity=0.068 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHHHhccHHHH-HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhc
Q 018453 103 SLYGALIGSILAFNIADILGRRREL-ILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETA 176 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr~Grr~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~ 176 (355)
..+|..+|+..=-.+.....++... ....++..+++++.++......---.|.+.+.|.-+.++.-.++..|..
T Consensus 8 V~iGG~lGa~~Ry~~~~~~~~~~~~p~gTl~VNi~GsfllG~~~~~~~~~~~~~~l~tGflGgfTTFSTf~~e~~ 82 (119)
T PRK14230 8 LSIGAALGATARWLLNLAVPASLSPATGNLFANWTGALLIGIFAETVNHPQWKLLLITGFLGSLTTLSGFSLETV 82 (119)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHhchHhhHHHHHHHHH
Confidence 4556666665443333333222111 3344555666666555432211011344555555555666677766665
No 302
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=63.07 E-value=1.7e+02 Score=30.09 Aligned_cols=36 Identities=8% Similarity=-0.137 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHH
Q 018453 189 EFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAV 225 (355)
Q Consensus 189 ~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~ 225 (355)
.....++.++..+++.+++... +|...+++.++++.
T Consensus 107 ~~~M~lT~livAL~a~~Li~GL-~~~~ALLLGAILAP 142 (810)
T TIGR00844 107 VPVMTSGWLVIALFVWILVPGL-NFPASLLMGACITA 142 (810)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC-CHHHHHHHHhhhcC
Confidence 3334444455444544443344 67777777766644
No 303
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=62.41 E-value=70 Score=25.22 Aligned_cols=26 Identities=31% Similarity=0.414 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccHH
Q 018453 100 TSGSLYGALIGSILAFNIADILGRRR 125 (355)
Q Consensus 100 ~~~~~~~~~~~~~~~g~l~dr~Grr~ 125 (355)
+.-|.+|+.+...+.|++.+|..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccc
Confidence 44678889999999999999988764
No 304
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=61.37 E-value=31 Score=31.60 Aligned_cols=92 Identities=15% Similarity=0.175 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH--HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHh
Q 018453 97 GLITSGSLYGALIGSILAFNIADILGRRRELI--LAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAE 174 (355)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e 174 (355)
|..-++..+..+++.+..|.+.-.+.|..-++ ++.+..+...++++-.+++|...++..+.+.......++...-+++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 45555666777888899999987776653333 3444444444555566789999999999888888888888888888
Q ss_pred hcCCCchhHHHHHH
Q 018453 175 TAPTPMRGQLISLK 188 (355)
Q Consensus 175 ~~~~~~r~~~~~~~ 188 (355)
....+.-|...|+.
T Consensus 354 nL~~e~~gLvFGiN 367 (433)
T KOG3810|consen 354 NLSSELFGLVFGIN 367 (433)
T ss_pred hhhhhhheeeeehH
Confidence 87777766665554
No 305
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=61.01 E-value=1.2e+02 Score=30.78 Aligned_cols=44 Identities=18% Similarity=0.304 Sum_probs=28.3
Q ss_pred hccHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHhhH
Q 018453 121 LGRRRELILAALLYLVGALVTALA-PDFIIMVVGRFVFGIGIGLA 164 (355)
Q Consensus 121 ~Grr~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~r~l~G~~~g~~ 164 (355)
-||.+-++++.++..++++...+. +..+.+..+.++.+++.++.
T Consensus 54 ~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~ml 98 (704)
T TIGR01666 54 TGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIML 98 (704)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 466677778888877777766554 44556666666666655543
No 306
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=60.29 E-value=88 Score=31.48 Aligned_cols=60 Identities=15% Similarity=0.111 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 018453 147 FIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL 206 (355)
Q Consensus 147 ~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 206 (355)
.+..+.-.++.|++.........-+-..-.|++.|....+++.+..++|.++...+...-
T Consensus 565 ~~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~~ 624 (654)
T TIGR00926 565 ILWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAEFE 624 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 444555567777777776666666777778999999999999999999999988877653
No 307
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=59.19 E-value=1.5e+02 Score=30.05 Aligned_cols=44 Identities=18% Similarity=0.290 Sum_probs=29.2
Q ss_pred hccHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHhhH
Q 018453 121 LGRRRELILAALLYLVGALVTALA-PDFIIMVVGRFVFGIGIGLA 164 (355)
Q Consensus 121 ~Grr~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~r~l~G~~~g~~ 164 (355)
-||.+-++++.++..++++...+. +..+.+..+.++.+++.++.
T Consensus 54 ~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~ml 98 (701)
T TIGR01667 54 TGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILL 98 (701)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 366777888888888888777654 44555656666666665543
No 308
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=59.10 E-value=49 Score=30.81 Aligned_cols=61 Identities=11% Similarity=0.087 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 018453 150 MVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLV 210 (355)
Q Consensus 150 ~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 210 (355)
++....+.+...-..+...+++.+++.++.--|+.|++.++..++|+-.-..+..++.+..
T Consensus 372 ~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~l 432 (510)
T KOG3574|consen 372 LITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGL 432 (510)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccC
Confidence 3345666666667778888999999999999999999999999999888777777777654
No 309
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=57.70 E-value=1.2e+02 Score=28.02 Aligned_cols=17 Identities=18% Similarity=0.034 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHHHHhc
Q 018453 106 GALIGSILAFNIADILG 122 (355)
Q Consensus 106 ~~~~~~~~~g~l~dr~G 122 (355)
.-++..+..|++..|+|
T Consensus 7 ~~i~~ii~~G~~~~~~~ 23 (385)
T PF03547_consen 7 LPIFLIILLGYLLGRFG 23 (385)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 33444455556655543
No 310
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=55.85 E-value=57 Score=26.78 Aligned_cols=24 Identities=29% Similarity=0.416 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcc
Q 018453 100 TSGSLYGALIGSILAFNIADILGR 123 (355)
Q Consensus 100 ~~~~~~~~~~~~~~~g~l~dr~Gr 123 (355)
+..|.+++.++..+.|++.||..+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 346778999999999999999986
No 311
>PHA03239 envelope glycoprotein M; Provisional
Probab=54.14 E-value=1.9e+02 Score=27.29 Aligned_cols=34 Identities=12% Similarity=0.034 Sum_probs=15.9
Q ss_pred hhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcC
Q 018453 144 APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAP 177 (355)
Q Consensus 144 ~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~ 177 (355)
++|+...+.--.+..+..-...++....+.|.+-
T Consensus 254 gNsF~v~~~~~v~~ai~~F~vL~iiyliv~E~vL 287 (429)
T PHA03239 254 ALHFGLDIPKATSGALSMFIVLGIIYLMMAELTV 287 (429)
T ss_pred hcceeeehhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444333333333344444445555556666553
No 312
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=52.05 E-value=91 Score=22.74 Aligned_cols=29 Identities=14% Similarity=0.155 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHH
Q 018453 105 YGALIGSILAFNIADILGRRRELILAALL 133 (355)
Q Consensus 105 ~~~~~~~~~~g~l~dr~Grr~~~~~~~~l 133 (355)
+..++|..++-||=.++|.+..+.+.+++
T Consensus 54 ~pil~G~~lG~WLD~~~~t~~~~tl~~ll 82 (100)
T TIGR02230 54 IPTLLGVAVGIWLDRHYPSPFSWTLTMLI 82 (100)
T ss_pred HHHHHHHHHHHHHHhhcCCCcHHHHHHHH
Confidence 33344444444444567765544443333
No 313
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=50.89 E-value=4.1e+02 Score=29.90 Aligned_cols=19 Identities=16% Similarity=0.114 Sum_probs=10.8
Q ss_pred chhHHHHhHHHHHHHHHHH
Q 018453 212 GWRYMYGASTPLAVIMGMG 230 (355)
Q Consensus 212 ~w~~~~~~~~~~~~~~~~~ 230 (355)
+|+.++++.+++.++.++.
T Consensus 196 sw~Lalv~l~~~pl~~~~~ 214 (1466)
T PTZ00265 196 NARLTLCITCVFPLIYICG 214 (1466)
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 7887776555544443333
No 314
>PRK14220 camphor resistance protein CrcB; Provisional
Probab=49.25 E-value=1.1e+02 Score=23.05 Aligned_cols=74 Identities=19% Similarity=0.187 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhc
Q 018453 103 SLYGALIGSILAFNIADILGRR-----RELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETA 176 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr~Grr-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~ 176 (355)
..+|..+|.+.--.+...+.++ ..-....++..+++++.++......---.|.+.+.|.-+.++.-.++..|..
T Consensus 6 V~~GG~~Ga~lRy~l~~~~~~~~~~~~~fP~~Tl~VNi~GsfllG~l~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~ 84 (120)
T PRK14220 6 AGFGASIGAMLRYAITNYGKKHWEQFSNLPTPTLLINLTGAFILGLIFGRKFNPFIYALLGTGVLGGYTTFSTLNTELV 84 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccCCccHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHccccccHHHHHHHHH
Confidence 4456666666544444332221 1112344555566666554332211112355555555555666666666665
No 315
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=49.09 E-value=27 Score=29.64 Aligned_cols=95 Identities=24% Similarity=0.279 Sum_probs=60.0
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHhhHHhH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA-PDFIIMVVGRFVFGIGIGLAMHA 167 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~r~l~G~~~g~~~~~ 167 (355)
||+++.+.--..+.|.+|..+|.++.+.++.-+ ..+. -+. ...-.-.|+|.|...+.
T Consensus 134 YGldSpEgrGVl~~Yi~GTvfGtiffsllas~~-------------------a~~~~fhP---~ALAMasGvGSgSMMaA 191 (241)
T PF11299_consen 134 YGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLL-------------------ASLGIFHP---YALAMASGVGSGSMMAA 191 (241)
T ss_pred cCCCCccccceEEEeeehhhHHHHHHHHHHHHH-------------------HhccCCCH---HHHHHHcCCcHHHHHHH
Confidence 677666655566677777777777666553211 1110 111 12233468888888888
Q ss_pred HHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 018453 168 APMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLL 206 (355)
Q Consensus 168 ~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 206 (355)
...-+.+.+| +......++....+-+.++.|..+.-++
T Consensus 192 a~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 192 ASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred HHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888887 5667777777777777766666555443
No 316
>PRK14200 camphor resistance protein CrcB; Provisional
Probab=47.87 E-value=1.2e+02 Score=23.11 Aligned_cols=74 Identities=12% Similarity=0.110 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHhhhhHHHH-----HHHHHHHHHHHhhHHhHHHHHHHh
Q 018453 103 SLYGALIGSILAFNIADILGRR---RELILAALLYLVGALVTALAPDFIIM-----VVGRFVFGIGIGLAMHAAPMYIAE 174 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr~Grr---~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~r~l~G~~~g~~~~~~~~~~~e 174 (355)
..+|..+|...=-.++..+.++ ..-....++..+++++.++...+..- --.|.+.+.|.-+.++.-.++..|
T Consensus 10 V~~GG~lGa~~Ry~l~~~~~~~~~~~fP~gTl~VN~~GsfllG~~~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~E 89 (127)
T PRK14200 10 IALGGAFGACSRYLVSELCVVLLGRGFPYGTLTVNVVGSFIMGLLIAAFENELLATEPWRQIIGLGFLGALTTFSTFSMD 89 (127)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHhccchhHHHHHHH
Confidence 4456666665443333333211 11123444555555555543221100 013555555555556666777766
Q ss_pred hc
Q 018453 175 TA 176 (355)
Q Consensus 175 ~~ 176 (355)
..
T Consensus 90 ~~ 91 (127)
T PRK14200 90 NV 91 (127)
T ss_pred HH
Confidence 65
No 317
>PRK14215 camphor resistance protein CrcB; Provisional
Probab=47.75 E-value=1.2e+02 Score=23.05 Aligned_cols=73 Identities=19% Similarity=0.187 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHH----hccHHHHHHHHHHHHHHHHHHHhhhhHHHH-----HHHHHHHHHHHhhHHhHHHHHHH
Q 018453 103 SLYGALIGSILAFNIADI----LGRRRELILAALLYLVGALVTALAPDFIIM-----VVGRFVFGIGIGLAMHAAPMYIA 173 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr----~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~r~l~G~~~g~~~~~~~~~~~ 173 (355)
..+|..+|...=-.++.. ++++ .-....++..+++++.++...+..- --.|.+.+.|.-+.++...++..
T Consensus 7 V~~Gg~~Ga~~Ry~l~~~~~~~~~~~-fP~gTl~vN~~GsfllG~~~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~ 85 (126)
T PRK14215 7 IAVGAAIGANLRYGIGLWAAQRWGTS-WPYGTFIINLLGCLLIGLLLTLATTRLTLSEPARLMLVTGLLGGFTTFSTFGY 85 (126)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcccCC-CchHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHhHHhcccccHHHHHH
Confidence 455666666544333332 2322 1123444555566655543221100 01344555555555666677777
Q ss_pred hhc
Q 018453 174 ETA 176 (355)
Q Consensus 174 e~~ 176 (355)
|..
T Consensus 86 E~~ 88 (126)
T PRK14215 86 ESY 88 (126)
T ss_pred HHH
Confidence 765
No 318
>PRK14211 camphor resistance protein CrcB; Provisional
Probab=46.53 E-value=1.2e+02 Score=22.63 Aligned_cols=74 Identities=14% Similarity=0.244 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHHHhccHHHH-HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhc
Q 018453 103 SLYGALIGSILAFNIADILGRRREL-ILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETA 176 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr~Grr~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~ 176 (355)
..+|..+|...--.++....++..+ ....++..+++++.++......---.|.+.+.|.-+.++...++..|..
T Consensus 6 V~~Gg~~Ga~~Ry~l~~~~~~~~~fP~gTl~vN~~GsfllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~ 80 (114)
T PRK14211 6 VALGGALGATTRYLTGRYVDSYRSFPVATFLVNVAGCLILGLLSGASLSTQTFALLGTGFCGGLTTYSTFAVESV 80 (114)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhhcCCcCcHHHHHHHHH
Confidence 4456666666544444433321111 2344455566666654332211111355555555555666677776665
No 319
>PRK14218 camphor resistance protein CrcB; Provisional
Probab=45.92 E-value=1.4e+02 Score=23.07 Aligned_cols=73 Identities=18% Similarity=0.183 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHHH----HhccHHHHHHHHHHHHHHHHHHHhhhhHHH----H-HHHHHHHHHHHhhHHhHHHHHHH
Q 018453 103 SLYGALIGSILAFNIAD----ILGRRRELILAALLYLVGALVTALAPDFII----M-VVGRFVFGIGIGLAMHAAPMYIA 173 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~d----r~Grr~~~~~~~~l~~~~~~~~~~~~~~~~----~-~~~r~l~G~~~g~~~~~~~~~~~ 173 (355)
..+|..+|.+.=-.++. ++++. .-....++..+++++.++...+.. . --.|.+.+.|.-+.++...++..
T Consensus 13 V~~GG~~Ga~lRy~l~~~~~~~~~~~-fP~gTl~VNv~GsfllG~l~~~~~~~~~~~~~~~~~l~tGflGgfTTFSTf~~ 91 (133)
T PRK14218 13 VMLGGAFGSGLRFVIGSCLLQRFGAG-FPWGTLAVNLIGSFVAGFLLIWLDKRGSAGWPWRMLLIVGLIGGLTTFSSLMM 91 (133)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC-CcHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHhchhccHHHHHH
Confidence 45666666664433332 23322 112344555666666555332210 0 11455555555556666677777
Q ss_pred hhc
Q 018453 174 ETA 176 (355)
Q Consensus 174 e~~ 176 (355)
|..
T Consensus 92 E~~ 94 (133)
T PRK14218 92 ECL 94 (133)
T ss_pred HHH
Confidence 765
No 320
>COG4177 LivM ABC-type branched-chain amino acid transport system, permease component [Amino acid transport and metabolism]
Probab=43.74 E-value=2.5e+02 Score=25.36 Aligned_cols=56 Identities=18% Similarity=0.102 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHH----HHHHHHHHHHHHHHHHHHHhhc
Q 018453 148 IIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLIS----LKEFFIVLGMVGGYGIGSLLVD 208 (355)
Q Consensus 148 ~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~----~~~~~~~~g~~~~~~i~~~l~~ 208 (355)
..+.++-++.|++.+.. +.-.....++.-....+ +.....+.|...||.++..+..
T Consensus 209 ~aF~isa~~AGiAGaL~-----a~~~~~v~p~~f~~~~S~~~l~~vvlGG~Gt~~G~v~Ga~l~~ 268 (314)
T COG4177 209 LAFVISAAIAGIAGALY-----ALYLGFVSPESFSFTLSIEVLAMVVLGGAGTLFGALLGAVLVV 268 (314)
T ss_pred HHHHHHHHHHHHHHHHH-----HHHhceeChhhccHHHHHHHHHHHHHcCccccHHHHHHHHHHH
Confidence 34455556666654432 22233333333333333 3455566677888888877664
No 321
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=43.08 E-value=2.2e+02 Score=24.65 Aligned_cols=6 Identities=17% Similarity=0.567 Sum_probs=2.8
Q ss_pred HHhhcC
Q 018453 172 IAETAP 177 (355)
Q Consensus 172 ~~e~~~ 177 (355)
.....|
T Consensus 57 ~~k~lP 62 (249)
T PF10225_consen 57 LSKLLP 62 (249)
T ss_pred HHHHcc
Confidence 344455
No 322
>PRK14219 camphor resistance protein CrcB; Provisional
Probab=43.04 E-value=1.5e+02 Score=22.76 Aligned_cols=73 Identities=14% Similarity=0.156 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHHh----ccHHHHHHHHHHHHHHHHHHHhhhhHHHH-----HHHHHHHHHHHhhHHhHHHHHHH
Q 018453 103 SLYGALIGSILAFNIADIL----GRRRELILAALLYLVGALVTALAPDFIIM-----VVGRFVFGIGIGLAMHAAPMYIA 173 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr~----Grr~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~r~l~G~~~g~~~~~~~~~~~ 173 (355)
..+|..+|.+.=-.+.... +.. .-....++..+++++.++...+..- -..|.+.+.|.-+.++...++..
T Consensus 6 V~lGg~lGa~~Ry~l~~~~~~~~~~~-fP~gTl~vNi~GsfllG~~~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~ 84 (132)
T PRK14219 6 VGIAGILGALSRYYLGLTIHEFWHHT-FPLATLLINLAGCFLLAWLTTYIAKLNILPSDVITGIGTGFIGSFTTFSTFSV 84 (132)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCC-CcHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHccchhhHHHHHH
Confidence 4455666665433333222 221 1122444555555555543222100 01344455555555666666766
Q ss_pred hhc
Q 018453 174 ETA 176 (355)
Q Consensus 174 e~~ 176 (355)
|..
T Consensus 85 E~~ 87 (132)
T PRK14219 85 ETI 87 (132)
T ss_pred HHH
Confidence 665
No 323
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein
Probab=43.00 E-value=2.7e+02 Score=26.66 Aligned_cols=30 Identities=20% Similarity=0.362 Sum_probs=18.5
Q ss_pred ccHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 018453 122 GRRRELILAALLYLVGALVTALAPDFIIMV 151 (355)
Q Consensus 122 Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~ 151 (355)
|.|+.+.-..+...++.+..++.+++.+..
T Consensus 339 ~~~~~~~~~~~t~~~sa~WHG~~~gYyl~f 368 (465)
T PLN02332 339 GKKPGFFQLLATQTVSAVWHGLYPGYILFF 368 (465)
T ss_pred CcchhHHHHHHHHHHHHHHhcCCcHHHHHH
Confidence 334444445566667777888777765544
No 324
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=42.55 E-value=1.2e+02 Score=21.36 Aligned_cols=70 Identities=21% Similarity=0.086 Sum_probs=42.8
Q ss_pred HHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHH
Q 018453 158 GIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGM 231 (355)
Q Consensus 158 G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~ 231 (355)
|+|=-...+..|..+.|.--. ....++....+-+|.++|.++...+.... ..+..+....+.+.+..+..
T Consensus 5 GigRFayTplLP~M~~~~~ls---~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~m 74 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQADGGLS---LSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAM 74 (85)
T ss_pred hhHHHHHHhHhHHHHHhcCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHH
Confidence 444334566777777765422 34457778888888888888888776553 45555555555544444433
No 325
>PRK10692 hypothetical protein; Provisional
Probab=40.67 E-value=1.2e+02 Score=21.37 Aligned_cols=19 Identities=26% Similarity=0.450 Sum_probs=11.1
Q ss_pred cHHHHHHHHHHHHHHHHHH
Q 018453 123 RRRELILAALLYLVGALVT 141 (355)
Q Consensus 123 rr~~~~~~~~l~~~~~~~~ 141 (355)
||...+++.++++++++++
T Consensus 3 Rk~a~~~GN~lMglGmv~M 21 (92)
T PRK10692 3 RKNASLLGNVLMGLGLVVM 21 (92)
T ss_pred chhhHHHhhHHHHHHHHHH
Confidence 5566666666666655433
No 326
>COG1288 Predicted membrane protein [Function unknown]
Probab=40.56 E-value=3.3e+02 Score=25.87 Aligned_cols=38 Identities=16% Similarity=0.089 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHhh-ccccchhHHHHhHHHHHHHHHH
Q 018453 191 FIVLGMVGGYGIGSLLV-DLVAGWRYMYGASTPLAVIMGM 229 (355)
Q Consensus 191 ~~~~g~~~~~~i~~~l~-~~~~~w~~~~~~~~~~~~~~~~ 229 (355)
.+.++..++.-+++.-. +.. +||...|+...+..+..+
T Consensus 196 ~NPF~~~IAq~iAGip~~sG~-~~Riv~~v~~~~~~i~y~ 234 (481)
T COG1288 196 MNPFATVIAQNIAGIPFLSGM-GLRIVVWVVFTLISIIYV 234 (481)
T ss_pred cCchHHHHHhhhcCCcccccc-hHHHHHHHHHHHHHHHHH
Confidence 34455555555555433 333 899998887666444433
No 327
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=40.30 E-value=2.6e+02 Score=24.63 Aligned_cols=36 Identities=17% Similarity=0.287 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHhh
Q 018453 128 ILAALLYLVGALVTAL-APDFIIMVVGRFVFGIGIGL 163 (355)
Q Consensus 128 ~~~~~l~~~~~~~~~~-~~~~~~~~~~r~l~G~~~g~ 163 (355)
+.+.+++.+..++..+ .++.+.+.+..++.+++.++
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~m 39 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGM 39 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 3444444344444433 34555665666666665553
No 328
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=39.73 E-value=50 Score=24.26 Aligned_cols=50 Identities=18% Similarity=0.107 Sum_probs=38.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHh
Q 018453 94 VEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL 143 (355)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~ 143 (355)
...|-+.+++.=.+++.+++.++..|+..+.+.=.++..+..++..+..+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 34567778888889999999999999998877767777777666655443
No 329
>PRK14205 camphor resistance protein CrcB; Provisional
Probab=39.45 E-value=1.6e+02 Score=22.09 Aligned_cols=75 Identities=19% Similarity=0.255 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcC
Q 018453 103 SLYGALIGSILAFNIADILGRR---RELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAP 177 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr~Grr---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~ 177 (355)
..+|..+|...--.++..+.++ ..-....++..+++++.++......---.|.+.+.|.-+.++.-.++..|...
T Consensus 7 V~~Gg~~Ga~lRy~l~~~~~~~~~~~fP~gT~~vNv~GsfllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~ 84 (118)
T PRK14205 7 VATGGFFGAITRFAISNWFKKRNKTSFPIATFLINITGAFLLGYIIGNGVTTGWQLLLGTGFMGAFTTFSTFKLESVQ 84 (118)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHHHHHHHHhccCHHHHHHHHhhhccccccHHHHHHHHHH
Confidence 4456666666444444333221 11123445555666655543221111113445555555556666667666653
No 330
>PRK02237 hypothetical protein; Provisional
Probab=39.08 E-value=78 Score=23.34 Aligned_cols=49 Identities=22% Similarity=0.154 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHh
Q 018453 95 EIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTAL 143 (355)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~ 143 (355)
..|-+.+++.=.+++.+++.+++.|+..+-+.=.++..+..++..+..+
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 4678888888899999999999999987766666777776666655443
No 331
>PRK14196 chromosome condensation membrane protein; Provisional
Probab=39.02 E-value=1.7e+02 Score=22.27 Aligned_cols=74 Identities=16% Similarity=0.169 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHHHhccH--HHHHHHHHHHHHHHHHHHhhhhHHH-----HHHHHHHHHHHHhhHHhHHHHHHHhh
Q 018453 103 SLYGALIGSILAFNIADILGRR--RELILAALLYLVGALVTALAPDFII-----MVVGRFVFGIGIGLAMHAAPMYIAET 175 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr~Grr--~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~r~l~G~~~g~~~~~~~~~~~e~ 175 (355)
..+|..+|...=-.+...+.++ ..-....++..+++++.++...+.. ---.|.+.+.|..+.++...++..|.
T Consensus 8 V~~Gg~~Ga~~Ry~l~~~~~~~~~~fP~gTl~vN~~GsfllG~l~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~E~ 87 (127)
T PRK14196 8 VFIGAGLGALLRWLLGLRLNPLFPALPLGTLAANLIGGYIIGVAVAWFARMPGLDPEWRLLIITGFCGGLTTFSTFSAEV 87 (127)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhHHhchhhhHHHHHHHH
Confidence 4456666665444444333221 1112344555566665554322110 01135555666566677777777777
Q ss_pred c
Q 018453 176 A 176 (355)
Q Consensus 176 ~ 176 (355)
.
T Consensus 88 ~ 88 (127)
T PRK14196 88 V 88 (127)
T ss_pred H
Confidence 5
No 332
>PRK14231 camphor resistance protein CrcB; Provisional
Probab=38.50 E-value=1.8e+02 Score=22.28 Aligned_cols=74 Identities=16% Similarity=0.134 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHH-----HHHHHHHHHHHhhHHhHHHHHHHhhc
Q 018453 103 SLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIM-----VVGRFVFGIGIGLAMHAAPMYIAETA 176 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~r~l~G~~~g~~~~~~~~~~~e~~ 176 (355)
..+|..+|.+.=-.+...+.....-....++..+++++.++...+..- --.|.+.+.|.-+.++...++..|..
T Consensus 6 V~lGG~~Ga~~Ry~l~~~~~~~~fP~gTl~vNi~GsfllG~l~~~~~~~~~~~~~~~~~l~tGflGgfTTFSTf~~e~~ 84 (129)
T PRK14231 6 VGVFGALGGMCRYAMNLWLGGGDFPSATLAVNLIGCFLLAFLMQFLAEKSRISLVILNGIGTGFIGAFTTFSAFSVDTI 84 (129)
T ss_pred HHHhHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHhHHhcccccHHHHHHHHH
Confidence 345556666544334333322111123444555555555543221100 01344444444445566666666655
No 333
>PRK03818 putative transporter; Validated
Probab=38.10 E-value=4e+02 Score=26.22 Aligned_cols=81 Identities=12% Similarity=0.036 Sum_probs=39.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHHHHHHhhHHhHHHHHH
Q 018453 94 VEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDF-IIMVVGRFVFGIGIGLAMHAAPMYI 172 (355)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~r~l~G~~~g~~~~~~~~~~ 172 (355)
.+.|+...++.+|.-.|.-+..-+.+..|.+.. +++.++..+..++..+...+ .-+-..+.+-.++.+...+....+.
T Consensus 435 ~~~GL~lFla~vGl~aG~~f~~~~~~~~G~~~~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~tp~l~~a 513 (552)
T PRK03818 435 RELGIVLFLAVVGLKSGGDFVDTLVNGEGLSWI-GYGFLITAVPLLIVGILARMLAKMNYLTLCGMLAGSMTDPPALAFA 513 (552)
T ss_pred HHHhHHHHHHHHHhhhhHHHHHHHhccchHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccCCCcHHHHHH
Confidence 445666666666666666655555444555544 34444444444333332211 1111223333344555566666777
Q ss_pred Hhh
Q 018453 173 AET 175 (355)
Q Consensus 173 ~e~ 175 (355)
.|.
T Consensus 514 ~~~ 516 (552)
T PRK03818 514 NNL 516 (552)
T ss_pred hcc
Confidence 774
No 334
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=38.06 E-value=1.2e+02 Score=19.99 Aligned_cols=37 Identities=16% Similarity=0.236 Sum_probs=20.6
Q ss_pred hhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchh
Q 018453 145 PDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRG 182 (355)
Q Consensus 145 ~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~ 182 (355)
-++..+......-+++.+.... ...+++|..+.+++|
T Consensus 26 i~it~F~~n~~~g~i~i~I~l~-l~G~isE~i~~~Kgg 62 (63)
T PF06341_consen 26 INITAFLINQIAGLISIGITLF-LAGLISEFISKQKGG 62 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhccCC
Confidence 3445555555555555554333 356778888775543
No 335
>PF15188 CCDC-167: Coiled-coil domain-containing protein 167
Probab=37.95 E-value=1.2e+02 Score=21.41 Aligned_cols=22 Identities=9% Similarity=0.259 Sum_probs=15.5
Q ss_pred hhhhcccchhHHHHHHHHHHHH
Q 018453 298 REVFHGKCLKALIIGAGLVLFQ 319 (355)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~ 319 (355)
-..++..+++.++++.++++.+
T Consensus 59 L~~LrkENrK~~~ls~~l~~v~ 80 (85)
T PF15188_consen 59 LKLLRKENRKSMLLSVALFFVC 80 (85)
T ss_pred HHHHHHhhhhhHHHHHHHHHHH
Confidence 3456767888888877766654
No 336
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter. All members of the seed alignment for this model are asparate-alanine anti-transporters (AspT) encoded next to the gene for aspartate 4-decarboxylase (AspD), which converts asparate to alanine, releasing CO2. The exchange of Asp for Ala is electrogenic, so the AspD/AspT system confers a proton-motive force. This transporter contains two copies of the AspT/YidE/YbjL antiporter duplication domain (TIGR01625).
Probab=37.60 E-value=4.2e+02 Score=26.21 Aligned_cols=83 Identities=14% Similarity=0.151 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHH-HHHHHHHHHHHHhhHHhHHHHHHH
Q 018453 95 EIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFII-MVVGRFVFGIGIGLAMHAAPMYIA 173 (355)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~r~l~G~~~g~~~~~~~~~~~ 173 (355)
+.|+...++.+|.-.|.-+..-+. +.|-+.. +++.++..+..++..+...+.. +-....+-.++.+...+....+..
T Consensus 451 ~~GL~lFla~vG~~aG~~f~~~l~-~~G~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~t~~l~~a~ 528 (562)
T TIGR03802 451 DLGLALFIAVVGLSAGPQAVTAIK-EMGLTLF-LLGIVVTILPLIITMLIGKYVLKYDPALLLGALAGARTATPALGAVL 528 (562)
T ss_pred HHhHHHHHHHHHHhhhHHHHHHHH-HhhHHHH-HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhccCCCcHHHHHHH
Confidence 567777778888888887777664 3555544 3445554444443332221111 111222222344455666667777
Q ss_pred hhcCCC
Q 018453 174 ETAPTP 179 (355)
Q Consensus 174 e~~~~~ 179 (355)
|..+.+
T Consensus 529 ~~~~~~ 534 (562)
T TIGR03802 529 ERAGSS 534 (562)
T ss_pred HhcCCC
Confidence 776543
No 337
>COG3619 Predicted membrane protein [Function unknown]
Probab=37.13 E-value=2.6e+02 Score=23.81 Aligned_cols=73 Identities=14% Similarity=0.131 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHhhhhhcccccccccccCCCCCC--CccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 018453 50 AILPFLFPALGGLLYGYDIGSTSCATISIESPTLSG--ISWYDLSSVEIGLITSGSLYGALIGSILAFNIADILGR 123 (355)
Q Consensus 50 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr 123 (355)
..+..+++..+.+.+.+.....+......+....-. .+ +.-++...........+..++|......+..|..|
T Consensus 10 l~l~~lLa~~aGfvDa~~f~~~gg~F~s~~TGN~v~~gi~-l~~~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 10 LRLGLLLALVAGFVDAFGFLHLGGVFVSFMTGNLVLLGIE-LAEGDAALAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred HHHHHHHHHHhhhHHHHHHHHhcCchhhheeccHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 344446666667777666544443333333210000 00 11124455666677777777886665555555554
No 338
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=36.47 E-value=1.1e+02 Score=26.04 Aligned_cols=17 Identities=12% Similarity=0.092 Sum_probs=8.4
Q ss_pred chhHHHHhHHHHHHHHH
Q 018453 212 GWRYMYGASTPLAVIMG 228 (355)
Q Consensus 212 ~w~~~~~~~~~~~~~~~ 228 (355)
++.|.+.+.+++..+.+
T Consensus 50 ~~~~~~~i~gi~~g~l~ 66 (224)
T PF13829_consen 50 GSWWYWLIIGILLGLLA 66 (224)
T ss_pred ccHHHHHHHHHHHHHHH
Confidence 44455555555544433
No 339
>PRK14201 camphor resistance protein CrcB; Provisional
Probab=35.68 E-value=1.9e+02 Score=21.79 Aligned_cols=47 Identities=17% Similarity=0.147 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHhhhhHHHH-----HHHHHHHHHHHhhHHhHHHHHHHhhc
Q 018453 130 AALLYLVGALVTALAPDFIIM-----VVGRFVFGIGIGLAMHAAPMYIAETA 176 (355)
Q Consensus 130 ~~~l~~~~~~~~~~~~~~~~~-----~~~r~l~G~~~g~~~~~~~~~~~e~~ 176 (355)
..++..+++++.++......- --.|.+.+.|..+.++...++..|..
T Consensus 33 Tl~vN~~G~fllG~~~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~E~~ 84 (121)
T PRK14201 33 TLIANLTGAFLMGLLTALTIAFFSNHPTLKKAITTGFLGALTTFSTFQFELI 84 (121)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHhhhccCcccchHHHHHHH
Confidence 445555666655554322110 01344555555555666666666665
No 340
>PRK14214 camphor resistance protein CrcB; Provisional
Probab=35.66 E-value=1.9e+02 Score=21.74 Aligned_cols=75 Identities=13% Similarity=0.242 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcC
Q 018453 103 SLYGALIGSILAFNIADILGRR---RELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAP 177 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr~Grr---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~ 177 (355)
..+|..+|...--.+...+.++ ..-....++..+++++.++......--..|.+.+.|.-+.++...++..|...
T Consensus 8 V~~GG~~Ga~~Ry~l~~~~~~~~~~~fP~gTl~vNv~GsfllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~ 85 (118)
T PRK14214 8 VGFGAALGAMLRYGISVLVKSKWKTNFPYATFFINITGSFLLGFLVSSALGPVWQLFLGTGFMGGYTTFSTFKVESME 85 (118)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHcccchhHHHHHHHHHH
Confidence 4456666665433333222211 11123445556666666554322111113555555555556666677766653
No 341
>COG4769 Predicted membrane protein [Function unknown]
Probab=35.65 E-value=1.5e+02 Score=23.78 Aligned_cols=49 Identities=16% Similarity=0.134 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 018453 107 ALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGI 161 (355)
Q Consensus 107 ~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 161 (355)
..+.+...-++..++|+|..-.++... +-++.+|...+.+++++.|-..
T Consensus 86 G~i~S~L~m~~l~~f~~k~~S~lgiS~------mGaF~hNl~QLivas~Lv~~~~ 134 (181)
T COG4769 86 GAILSTLFMYFLYQFGPKYLSLLGISV------MGAFTHNLGQLIVASFLVFTTS 134 (181)
T ss_pred HHHHHHHHHHHHHHcCCceEeeeehhh------HHHHHHhHHHHHHHHHHHhcch
Confidence 334444444667788877653333222 2355678888888887766543
No 342
>PHA03231 glycoprotein BALF4; Provisional
Probab=35.64 E-value=2e+02 Score=29.72 Aligned_cols=17 Identities=6% Similarity=-0.009 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHHHHh
Q 018453 190 FFIVLGMVGGYGIGSLL 206 (355)
Q Consensus 190 ~~~~~g~~~~~~i~~~l 206 (355)
+..+++++++.++.|++
T Consensus 681 vv~~v~ga~~SiVsG~~ 697 (829)
T PHA03231 681 VVSGVAGAVGSIVSGVI 697 (829)
T ss_pred hhhhHHHHHHHHHHHHH
Confidence 34455555666665554
No 343
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=35.63 E-value=3.8e+02 Score=25.59 Aligned_cols=94 Identities=17% Similarity=0.189 Sum_probs=57.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHhhHH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAP---DFIIMVVGRFVFGIGIGLAM 165 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~r~l~G~~~g~~~ 165 (355)
+|++.++...+.+.-.+...++.++--....+.|-|-....+.....++.++..... .....+.+-+..|+......
T Consensus 44 ~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~~~~~~g~~~~~~~G~ii~ag~~~~li~ 123 (451)
T COG2233 44 LGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIAIGGTTGDGIAALLGGIIAAGLVYFLIS 123 (451)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHH
Confidence 699999999999999999999998766533345556555555555444444443322 24555555555555444333
Q ss_pred hHHHHHHHhhcCCCchh
Q 018453 166 HAAPMYIAETAPTPMRG 182 (355)
Q Consensus 166 ~~~~~~~~e~~~~~~r~ 182 (355)
.....++..++||---|
T Consensus 124 ~~~~~~l~rlfPPvVtG 140 (451)
T COG2233 124 PIVKIRLARLFPPVVTG 140 (451)
T ss_pred HHHHHHHHHhCCCceEE
Confidence 33322666667765555
No 344
>PRK14202 camphor resistance protein CrcB; Provisional
Probab=35.42 E-value=2e+02 Score=21.95 Aligned_cols=74 Identities=16% Similarity=0.215 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccH--HHHHHHHHHHHHHHHHHHhhhhHHHH-----HHHHHHHHHHHhhHHhHHHHHHHhh
Q 018453 103 SLYGALIGSILAFNIADILGRR--RELILAALLYLVGALVTALAPDFIIM-----VVGRFVFGIGIGLAMHAAPMYIAET 175 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr~Grr--~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~r~l~G~~~g~~~~~~~~~~~e~ 175 (355)
..+|..+|...=-.++..+.++ ..-....++..+++++.++...+..- --.|.+.+.|.-+.++...++..|.
T Consensus 11 V~~Gg~~Ga~~Ry~l~~~~~~~~~~fP~gTl~vNi~GsfllG~~~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~ 90 (128)
T PRK14202 11 VGAGGFLGSVARYLVALALSFIGTGFPFATFTVNLLGSFLIGFISELALSTTLVSPEARLLLVTGFCGGFTTFSSYMYEI 90 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhHHhcccccHHHHHHHH
Confidence 4555666655443333332211 11123444555566655543322100 0134455555555566677777777
Q ss_pred c
Q 018453 176 A 176 (355)
Q Consensus 176 ~ 176 (355)
.
T Consensus 91 ~ 91 (128)
T PRK14202 91 A 91 (128)
T ss_pred H
Confidence 6
No 345
>PRK14226 camphor resistance protein CrcB; Provisional
Probab=35.36 E-value=2.1e+02 Score=22.01 Aligned_cols=75 Identities=15% Similarity=0.204 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhccH--HHHHHHHHHHHHHHHHHHhhhhHHH---------HHHHHHHHHHHHhhHHhHHHH
Q 018453 102 GSLYGALIGSILAFNIADILGRR--RELILAALLYLVGALVTALAPDFII---------MVVGRFVFGIGIGLAMHAAPM 170 (355)
Q Consensus 102 ~~~~~~~~~~~~~g~l~dr~Grr--~~~~~~~~l~~~~~~~~~~~~~~~~---------~~~~r~l~G~~~g~~~~~~~~ 170 (355)
...+|..+|...=-.+...+.++ ..-....++..+++++.++...... ---.|.+.+.|.-+.++.-.+
T Consensus 7 ~V~lGG~lGa~~Ry~l~~~~~~~~~~fP~gTl~VNv~GsfllG~l~~~~~~~~~~~~~~~~~~~~~l~tGflGgfTTFST 86 (130)
T PRK14226 7 LVGIGGGFGAMARFALTQATASISKQIPLGILLCNIIGSLIIGMMAAFLIETKLFNEDVSTYVRFLLVTGFLGGFTTFSS 86 (130)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHccccccHHH
Confidence 34566666666444444333211 1112344555666666655432111 011455556665556677777
Q ss_pred HHHhhc
Q 018453 171 YIAETA 176 (355)
Q Consensus 171 ~~~e~~ 176 (355)
+..|..
T Consensus 87 f~~e~~ 92 (130)
T PRK14226 87 FSLDIL 92 (130)
T ss_pred HHHHHH
Confidence 777765
No 346
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=33.36 E-value=2.8e+02 Score=23.05 Aligned_cols=23 Identities=13% Similarity=-0.162 Sum_probs=10.7
Q ss_pred chhHHHHhHHHHHHHHHHHHhhc
Q 018453 212 GWRYMYGASTPLAVIMGMGMWWL 234 (355)
Q Consensus 212 ~w~~~~~~~~~~~~~~~~~~~~~ 234 (355)
+.+..-++..++++++.++.+++
T Consensus 175 np~l~~~~~iiig~i~~~~~~~l 197 (206)
T PF06570_consen 175 NPVLPPWVYIIIGVIAFALRFYL 197 (206)
T ss_pred CcCCCHHHHHHHHHHHHHHHHHH
Confidence 34444444445555555544443
No 347
>PRK11469 hypothetical protein; Provisional
Probab=33.29 E-value=2.8e+02 Score=22.87 Aligned_cols=50 Identities=14% Similarity=0.206 Sum_probs=28.8
Q ss_pred CChhHHHHHHHHHHHHHHHHHH-HHHHHHHHhccHHHHHHHHHHHHHHHHH
Q 018453 91 LSSVEIGLITSGSLYGALIGSI-LAFNIADILGRRRELILAALLYLVGALV 140 (355)
Q Consensus 91 ~s~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~Grr~~~~~~~~l~~~~~~~ 140 (355)
.+.-.......+..+....... ++.++.+++|+|.-++-+.++..++.-+
T Consensus 131 ~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~i 181 (188)
T PRK11469 131 VNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQI 181 (188)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3343444444444444433333 4445667788888877777777776653
No 348
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=33.19 E-value=3.3e+02 Score=23.79 Aligned_cols=15 Identities=33% Similarity=0.461 Sum_probs=7.2
Q ss_pred chhHHHHhHHHHHHH
Q 018453 212 GWRYMYGASTPLAVI 226 (355)
Q Consensus 212 ~w~~~~~~~~~~~~~ 226 (355)
.=++++++.+++.++
T Consensus 128 pr~~T~~~~t~LF~i 142 (294)
T KOG2881|consen 128 PRKYTYYLATALFLI 142 (294)
T ss_pred hHHHHHHHHHHHHHH
Confidence 334555555554333
No 349
>PRK14232 camphor resistance protein CrcB; Provisional
Probab=33.07 E-value=2.1e+02 Score=21.54 Aligned_cols=75 Identities=13% Similarity=0.206 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcC
Q 018453 103 SLYGALIGSILAFNIADILGRR---RELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAP 177 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr~Grr---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~ 177 (355)
..+|..+|.+.=-.+.....++ ..-....++..+++++.++......---.|.+.+.|.-+.++...++..|...
T Consensus 6 V~~Gg~~Ga~~R~~l~~~~~~~~~~~fp~gTl~VN~~GsfllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~ 83 (120)
T PRK14232 6 VGIGGAFGSLARYQLGKVISKKSKSTFPVGTFIINITGAILLGIVSSSNISKNMYLLLGDGFLGAYTTFSTFMYEGFN 83 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHhcccchhHHHHHHHHHH
Confidence 4456666665443343333221 11123455556666666553221110113444455555556666777777653
No 350
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=32.94 E-value=1.4e+02 Score=19.22 Aligned_cols=43 Identities=21% Similarity=0.114 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHhhccccchhHHHHhHHHHHHHHHHHHhhcccc
Q 018453 194 LGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIMGMGMWWLPAS 237 (355)
Q Consensus 194 ~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~es 237 (355)
+|.+++-..+....... ++.....+..+.+++..++...+|++
T Consensus 13 l~~vvgyI~ssL~~~~~-n~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 13 LGEVVGYIGSSLTGVTY-NFTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred HHHHHHHHHHHHhCCCC-ChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 44444444433332333 67777667666666665555555544
No 351
>PRK14213 camphor resistance protein CrcB; Provisional
Probab=32.61 E-value=2.2e+02 Score=21.44 Aligned_cols=75 Identities=13% Similarity=0.200 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHHhccH----HHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHHHHHhhHHhHHHHHHHhhcC
Q 018453 103 SLYGALIGSILAFNIADILGRR----RELILAALLYLVGALVTALAPDFIIM-VVGRFVFGIGIGLAMHAAPMYIAETAP 177 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr~Grr----~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~r~l~G~~~g~~~~~~~~~~~e~~~ 177 (355)
..+|..+|...=-.+...+.++ ..-....++..+++++.++....... -..|.+.+.|.-+.++.-.++..|...
T Consensus 6 V~iGG~~Ga~~Ry~l~~~~~~~~~~~~fP~gTl~VNi~GsfllG~~~~~~~~~~~~~~~l~tGflGgfTTFSTf~~e~~~ 85 (118)
T PRK14213 6 IFIAGGIGAVLRFWLGNVITAKTKGLSLPIGIMTVNILGSFGLGIFTGLGVDNASVSIIIGTGFFGAFTTFSTFSVEAVQ 85 (118)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccCCCcHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHhcccccHHHHHHHHHH
Confidence 4466666666544444333221 11123445556666665553221100 013444555555556666777777653
No 352
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=32.58 E-value=75 Score=29.15 Aligned_cols=50 Identities=18% Similarity=0.094 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh
Q 018453 95 EIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALA 144 (355)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~ 144 (355)
-..+......+|..++..+.+++.|++|-...+.+..+.+.++.+.....
T Consensus 73 ~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 73 FFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 34567777888888888888999999999988888888888777766654
No 353
>PRK04972 putative transporter; Provisional
Probab=32.19 E-value=5.1e+02 Score=25.59 Aligned_cols=111 Identities=10% Similarity=-0.020 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHh
Q 018453 95 EIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAE 174 (355)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e 174 (355)
+.++...++.+|.-.|.-+..-+-. .-.+.++++.++..++.++......+.-+-.....-.++.+...+.......|
T Consensus 63 ~~gl~lF~~~vG~~~Gp~F~~~l~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~aGa~T~tp~l~~a~~ 140 (558)
T PRK04972 63 NLGFMLFIFCVGVEAGPNFFSIFFR--DGKNYLMLALVMVGSALVIALGLGKLFGWDIGLTAGMLAGSMTSTPVLVGAGD 140 (558)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhccccCcHHHHHHHH
Q ss_pred hcCC------------CchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 018453 175 TAPT------------PMRGQLISLKEFFIVLGMVGGYGIGSLLV 207 (355)
Q Consensus 175 ~~~~------------~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 207 (355)
.... .+-+.+.++.+....++.++...+...+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~vgYa~~y~~g~i~~i~~~~~~p~l~ 185 (558)
T PRK04972 141 TLRHSGAESRQLSLALDNLSLGYALTYLIGLVSLIVGARYLPKLQ 185 (558)
T ss_pred HHhccCccccchhcccCccchhHHhHHHHHHHHHHHHHHHHHHHh
No 354
>TIGR02978 phageshock_pspC phage shock protein C. All members of this protein family are the phage shock protein PspC. These proteins contain a PspC domain, as do other members of the larger family of proteins described by Pfam model pfam04024. The phage shock regulon is restricted to the Proteobacteria and somewhat sparsely distributed there. It is expressed, under positive control of a sigma-54-dependent transcription factor, PspF, which binds and is modulated by PspA. Stresses that induce the psp regulon include phage secretin overexpression, ethanol, heat shock, and protein export defects.
Probab=31.89 E-value=1.3e+02 Score=22.86 Aligned_cols=12 Identities=17% Similarity=-0.078 Sum_probs=7.2
Q ss_pred HHHhhcccchhH
Q 018453 229 MGMWWLPASPRW 240 (355)
Q Consensus 229 ~~~~~~~esp~~ 240 (355)
++++++|+.|..
T Consensus 53 i~w~~lp~~p~~ 64 (121)
T TIGR02978 53 ALWLLLDKKPIN 64 (121)
T ss_pred HHHHHHhcCccc
Confidence 345567777643
No 355
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=31.42 E-value=1.5e+02 Score=20.65 Aligned_cols=18 Identities=28% Similarity=0.571 Sum_probs=10.4
Q ss_pred cHHHHHHHHHHHHHHHHH
Q 018453 123 RRRELILAALLYLVGALV 140 (355)
Q Consensus 123 rr~~~~~~~~l~~~~~~~ 140 (355)
||...+++.++++++++.
T Consensus 3 Rk~a~~~GN~lMglGmv~ 20 (89)
T PF10762_consen 3 RKNAFLLGNVLMGLGMVV 20 (89)
T ss_pred chhhHHHhhHHHHHhHHH
Confidence 555566666666655543
No 356
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=31.36 E-value=4.4e+02 Score=24.63 Aligned_cols=51 Identities=10% Similarity=-0.027 Sum_probs=30.0
Q ss_pred HHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 018453 154 RFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGS 204 (355)
Q Consensus 154 r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~ 204 (355)
-++.|+..|........++.+...-++---+.++...+..+|.+..++.+.
T Consensus 277 A~~iG~iag~i~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa~ 327 (399)
T PF00909_consen 277 ALLIGAIAGLISYFGVSWLLKRLKIDDPVGAFAVHGVGGIWGTILTGLFAS 327 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTS-HTTGHHHHCHHHHHHHHHHHHHHCC
T ss_pred HHHhhhhHhhhhhhheecccceeEeccccceEeeeeccHHHHHHHHHHHhc
Confidence 345566555555554445666666666666777777666666666655543
No 357
>COG0239 CrcB Integral membrane protein possibly involved in chromosome condensation [Cell division and chromosome partitioning]
Probab=31.35 E-value=2.4e+02 Score=21.56 Aligned_cols=75 Identities=17% Similarity=0.268 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHhhhhHHH----H-HHHHHHHHHHHhhHHhHHHHHHH
Q 018453 102 GSLYGALIGSILAFNIADILGRR---RELILAALLYLVGALVTALAPDFII----M-VVGRFVFGIGIGLAMHAAPMYIA 173 (355)
Q Consensus 102 ~~~~~~~~~~~~~g~l~dr~Grr---~~~~~~~~l~~~~~~~~~~~~~~~~----~-~~~r~l~G~~~g~~~~~~~~~~~ 173 (355)
...+|..+|++.=-.++....++ ..=.-.++...+++++.++...... . -..|.+.|.|.-+.++...++..
T Consensus 7 ~v~~GGa~GA~lR~~l~~~~~~~~~~~fP~GTl~vNv~GsFllG~~~~~~~~~~~~~~~~~~~l~tGflGglTTFSTfs~ 86 (126)
T COG0239 7 LVAIGGALGALLRYLLSLLVNRRLGPGFPLGTLLVNVVGSFLLGFLTALFAVRLISSEDWRLLLGTGFLGGLTTFSTFSL 86 (126)
T ss_pred HHHHhhHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHccchhhHHHHHH
Confidence 44566667776655555555532 1112334444555555544322211 1 12466666665666677777777
Q ss_pred hhc
Q 018453 174 ETA 176 (355)
Q Consensus 174 e~~ 176 (355)
|..
T Consensus 87 E~~ 89 (126)
T COG0239 87 ETV 89 (126)
T ss_pred HHH
Confidence 765
No 358
>PRK14206 camphor resistance protein CrcB; Provisional
Probab=30.86 E-value=2.4e+02 Score=21.47 Aligned_cols=75 Identities=11% Similarity=0.136 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHhhhhHHH-------HHHHHHHHHHHHhhHHhHHHHHH
Q 018453 103 SLYGALIGSILAFNIADILGRR---RELILAALLYLVGALVTALAPDFII-------MVVGRFVFGIGIGLAMHAAPMYI 172 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr~Grr---~~~~~~~~l~~~~~~~~~~~~~~~~-------~~~~r~l~G~~~g~~~~~~~~~~ 172 (355)
..+|..+|...=-.+...+.++ ..-....++..+++++.++...+.. ---.|.+.+.|.-+.++.-.++.
T Consensus 6 V~~Gg~lGa~~Ry~l~~~~~~~~~~~fp~gTl~vNi~GsfllG~~~~~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~ 85 (127)
T PRK14206 6 IALGSALGGTLRFWLSGLVAEATGGTFPWGTLVINVSGSFLIGFFATLTGPEGRVFVGESWRLFVMVGVCGGFTTFSSFS 85 (127)
T ss_pred HHHhHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHhhcccccCCHHHHHHHHHHHccccccHHHHH
Confidence 3455556655433333322211 1112344555666666655432210 01245555666555667777777
Q ss_pred HhhcC
Q 018453 173 AETAP 177 (355)
Q Consensus 173 ~e~~~ 177 (355)
.|.+.
T Consensus 86 ~e~~~ 90 (127)
T PRK14206 86 LQTLN 90 (127)
T ss_pred HHHHH
Confidence 77753
No 359
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=30.65 E-value=2e+02 Score=21.15 Aligned_cols=27 Identities=15% Similarity=0.391 Sum_probs=18.5
Q ss_pred chhHHHHhHHHHHHHH-HHHHhhcccch
Q 018453 212 GWRYMYGASTPLAVIM-GMGMWWLPASP 238 (355)
Q Consensus 212 ~w~~~~~~~~~~~~~~-~~~~~~~~esp 238 (355)
+|+.+|++...++++. .+.+.+.||+.
T Consensus 58 ~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 58 GWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 7999998876666554 44555577764
No 360
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=30.61 E-value=4.6e+02 Score=24.66 Aligned_cols=126 Identities=13% Similarity=-0.013 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH------hh-h-----hHHHHHHHHHHHHHHHhh--HH
Q 018453 100 TSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTA------LA-P-----DFIIMVVGRFVFGIGIGL--AM 165 (355)
Q Consensus 100 ~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~------~~-~-----~~~~~~~~r~l~G~~~g~--~~ 165 (355)
..+-....++...+.|...|+..|+|++...+.+.-++.++++ +. + +...+..+..+.-...+. ..
T Consensus 69 glvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~La 148 (503)
T KOG2601|consen 69 GLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLA 148 (503)
T ss_pred HHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHH
Confidence 3334445566677778889999999988776665444333332 21 2 334443333332221111 11
Q ss_pred hHHHHH--HHhhc----CCCchhHH---HHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHH
Q 018453 166 HAAPMY--IAETA----PTPMRGQL---ISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVI 226 (355)
Q Consensus 166 ~~~~~~--~~e~~----~~~~r~~~---~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~ 226 (355)
.....+ -.||. ..+.+..+ .+..-..--.-..+.|.+.+.+.... +.|..-.+.++-.++
T Consensus 149 s~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfv-sl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 149 SLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFV-SLRASAGTFAAWALV 217 (503)
T ss_pred HhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceee-chhhhhhhhHHHHHH
Confidence 111111 12221 22333333 35555555666788888888888765 777655544444444
No 361
>PTZ00370 STEVOR; Provisional
Probab=30.34 E-value=1.2e+02 Score=26.71 Aligned_cols=23 Identities=22% Similarity=0.192 Sum_probs=13.0
Q ss_pred chhHHHHhHHHHHHHHHHHHhhc
Q 018453 212 GWRYMYGASTPLAVIMGMGMWWL 234 (355)
Q Consensus 212 ~w~~~~~~~~~~~~~~~~~~~~~ 234 (355)
.|-.+-++..+++++.+++..|+
T Consensus 256 Pygiaalvllil~vvliilYiwl 278 (296)
T PTZ00370 256 PYGIAALVLLILAVVLIILYIWL 278 (296)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHH
Confidence 56666666556655555555443
No 362
>PRK14212 camphor resistance protein CrcB; Provisional
Probab=29.24 E-value=2.6e+02 Score=21.35 Aligned_cols=73 Identities=14% Similarity=0.198 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHH----HhccHHHHHHHHHHHHHHHHHHHhhhhHHHH-----HHHHHHHHHHHhhHHhHHHHHHH
Q 018453 103 SLYGALIGSILAFNIAD----ILGRRRELILAALLYLVGALVTALAPDFIIM-----VVGRFVFGIGIGLAMHAAPMYIA 173 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~d----r~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~r~l~G~~~g~~~~~~~~~~~ 173 (355)
..+|..+|...=-.+.. +++++. -....++..+++++.++......- --.|.+.+.|.-+.++...++..
T Consensus 7 V~~Gg~~Ga~~Ry~l~~~~~~~~~~~f-P~~Tl~vN~~GsfllG~~~~~~~~~~~~~~~~~~~l~tGflGgfTTFSTf~~ 85 (128)
T PRK14212 7 LAAGGALGAVSRYGLNNLTVKLLGDSF-PYGTLIVNCLGCFVLGFLMQWGFSSDSHNTHLKLMLTAGFLGAFTTFSTFSY 85 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCC-chHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHhhHhcCcccHHHHHH
Confidence 44555566554433332 233221 123444555566655543221100 01344555555555666677777
Q ss_pred hhc
Q 018453 174 ETA 176 (355)
Q Consensus 174 e~~ 176 (355)
|..
T Consensus 86 E~~ 88 (128)
T PRK14212 86 ETL 88 (128)
T ss_pred HHH
Confidence 765
No 363
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=29.21 E-value=3.4e+02 Score=23.51 Aligned_cols=41 Identities=17% Similarity=0.037 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHhHHHHHHHH
Q 018453 185 ISLKEFFIVLGMVGGYGIGSLLVDLVAGWRYMYGASTPLAVIM 227 (355)
Q Consensus 185 ~~~~~~~~~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~~~~~ 227 (355)
......+..+|..+| ++.|.+.+.. +.+.+..+.++...++
T Consensus 39 l~~l~~~~~~G~~~G-~~~G~l~d~~-gp~~~l~iG~~~~~~G 79 (250)
T PF06813_consen 39 LNTLSTAGDIGSYFG-ILAGLLYDRF-GPWVVLLIGAVLGFVG 79 (250)
T ss_pred HHHHHHHHHHHhhcc-HHHHHHHHhc-chHHHHHHHHHHHHHH
Confidence 444455555565554 4455555555 4445555555554443
No 364
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=29.03 E-value=2.7e+02 Score=27.19 Aligned_cols=31 Identities=16% Similarity=0.113 Sum_probs=18.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 018453 178 TPMRGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (355)
Q Consensus 178 ~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 208 (355)
++.||..+...-..+.+++.++..+++.+..
T Consensus 292 ~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk 322 (521)
T PF02990_consen 292 PNNRGSLLTAAIILYALTSFIAGYVSARLYK 322 (521)
T ss_pred ccCcchHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 4556666666666666666666666665553
No 365
>PRK14199 camphor resistance protein CrcB; Provisional
Probab=28.64 E-value=2.7e+02 Score=21.29 Aligned_cols=74 Identities=19% Similarity=0.230 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHhhhhHHH-----HHHHHHHHHHHHhhHHhHHHHHHHh
Q 018453 103 SLYGALIGSILAFNIADILGRR---RELILAALLYLVGALVTALAPDFII-----MVVGRFVFGIGIGLAMHAAPMYIAE 174 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr~Grr---~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~r~l~G~~~g~~~~~~~~~~~e 174 (355)
..+|..+|++.=-.++..+.++ ..-....++..+++++.++...+.. --..|.+.+.|.-+.++..+++..|
T Consensus 10 V~~GG~~GA~~Ry~l~~~~~~~~~~~fP~gTl~VNi~GsfllG~~~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~E 89 (128)
T PRK14199 10 VGLGGFIGASLRYLISIFAAKMFNGNFPYGTLIVNIVGALLIGFIMEFSMDTALISSNMKLFLTTGIMGGLTTFSTFSYE 89 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHhHHhcccccHHHHHHH
Confidence 4556666666444444332221 1112344455566666554322110 0013445555555556666777777
Q ss_pred hc
Q 018453 175 TA 176 (355)
Q Consensus 175 ~~ 176 (355)
..
T Consensus 90 ~~ 91 (128)
T PRK14199 90 TI 91 (128)
T ss_pred HH
Confidence 65
No 366
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=28.62 E-value=45 Score=30.12 Aligned_cols=21 Identities=10% Similarity=-0.077 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 018453 186 SLKEFFIVLGMVGGYGIGSLL 206 (355)
Q Consensus 186 ~~~~~~~~~g~~~~~~i~~~l 206 (355)
|.++.+.+.|++++.++...+
T Consensus 217 gvyY~sig~~gfl~~IlvLaI 237 (372)
T KOG2927|consen 217 GVYYLSIGAGGFLAFILVLAI 237 (372)
T ss_pred ceeeeecchhHHHHHHHHHHH
Confidence 344444455555555554444
No 367
>PF11712 Vma12: Endoplasmic reticulum-based factor for assembly of V-ATPase; InterPro: IPR021013 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) (3.6.3.14 from EC) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins []. The yeast vacuolar proton-translocating ATPase (V-ATPase) is the best characterised member of the V-ATPase family. A total of thirteen genes are required for encoding the subunits of the enzyme complex itself and an additional three for providing factors necessary for the assembly of the whole. Vma12 is one of these latter, all three of which are localised to the endoplasmic reticulum [].
Probab=28.41 E-value=2.4e+02 Score=21.92 Aligned_cols=22 Identities=14% Similarity=-0.047 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 018453 95 EIGLITSGSLYGALIGSILAFN 116 (355)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~g~ 116 (355)
.-.+...+..+..+++..++||
T Consensus 76 ~~qls~v~Nilvsv~~~~~~~~ 97 (142)
T PF11712_consen 76 KRQLSTVFNILVSVFAVFFAGW 97 (142)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3345555666666777777776
No 368
>PRK14234 camphor resistance protein CrcB; Provisional
Probab=27.26 E-value=2.8e+02 Score=21.04 Aligned_cols=74 Identities=15% Similarity=0.224 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHhhhhHHHH-----HHHHHHHHHHHhhHHhHHHHHHHh
Q 018453 103 SLYGALIGSILAFNIADILGRR---RELILAALLYLVGALVTALAPDFIIM-----VVGRFVFGIGIGLAMHAAPMYIAE 174 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr~Grr---~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~r~l~G~~~g~~~~~~~~~~~e 174 (355)
..+|..+|...=-.+...+.++ ..-....++..+++++.++...+..- --.|.+.+.|.-+.++.-.++..|
T Consensus 8 V~~Gg~~Ga~~Ry~l~~~~~~~~~~~fP~~Tl~vNi~G~fllG~~~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e 87 (124)
T PRK14234 8 VSAGGIAGTLLRFATGNWVSANWPRHFYAATLAVNIVGCLLIGLLYGLFLLRPEVPIELRAGLIVGFLGGLTTFSSFSLD 87 (124)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHccccchHHHHHHH
Confidence 4456666665443333333221 11122444555666665543322110 124555566656666777777777
Q ss_pred hc
Q 018453 175 TA 176 (355)
Q Consensus 175 ~~ 176 (355)
..
T Consensus 88 ~~ 89 (124)
T PRK14234 88 TL 89 (124)
T ss_pred HH
Confidence 66
No 369
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=26.77 E-value=2.6e+02 Score=20.43 Aligned_cols=28 Identities=14% Similarity=0.173 Sum_probs=11.4
Q ss_pred HHHHHHHHHHhhcccc---chhHHHHhHHHH
Q 018453 196 MVGGYGIGSLLVDLVA---GWRYMYGASTPL 223 (355)
Q Consensus 196 ~~~~~~i~~~l~~~~~---~w~~~~~~~~~~ 223 (355)
.++|..++-++-..++ .|..+|++.++.
T Consensus 56 il~G~~lG~WLD~~~~t~~~~tl~~lllGv~ 86 (100)
T TIGR02230 56 TLLGVAVGIWLDRHYPSPFSWTLTMLIVGVV 86 (100)
T ss_pred HHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 3444444444433331 244444444443
No 370
>PF06826 Asp-Al_Ex: Predicted Permease Membrane Region; InterPro: IPR006512 These sequences contain a domain that is duplicated in HI0035 of Haemophilus influenzae, in YidE and YbjL of Escherichia coli, and in a number of other putative transporters. Member proteins may have 0, 1, or 2 copies of the TrkA-C potassium uptake domain (IPR006037 from INTERPRO) between the duplications. The duplication appears distantly related to both the N- and the C-terminal domains the sodium/hydrogen exchanger family domain (IPR006153 from INTERPRO). The domain contains several apparent transmembrane regions and is proposed here to act in transport.
Probab=26.61 E-value=3.4e+02 Score=21.88 Aligned_cols=83 Identities=18% Similarity=0.181 Sum_probs=47.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH-HHhhHHhHHHHH
Q 018453 93 SVEIGLITSGSLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGI-GIGLAMHAAPMY 171 (355)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~-~~g~~~~~~~~~ 171 (355)
-.+.++..-++.+|.-.|.-+..-+.+. |-|. ++.+.++..++.++......+..=+-.-...|+ +.+...+.....
T Consensus 55 l~~~GL~lFl~~VGl~aG~~F~~~l~~~-G~~~-~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~G~~aGa~T~tp~L~~ 132 (169)
T PF06826_consen 55 LRQLGLALFLAAVGLSAGPGFFSSLKRG-GLKL-LLLGVIITLVPLLIALVIGRYLFKLNPGIAAGILAGALTSTPALAA 132 (169)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHccccCcHHHHH
Confidence 4677888888889998888887776655 5544 445555555555444332221111111123343 334456666777
Q ss_pred HHhhcC
Q 018453 172 IAETAP 177 (355)
Q Consensus 172 ~~e~~~ 177 (355)
..|...
T Consensus 133 A~~~~~ 138 (169)
T PF06826_consen 133 AQEAIS 138 (169)
T ss_pred HHHhhh
Confidence 777733
No 371
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=26.22 E-value=4.8e+02 Score=24.12 Aligned_cols=12 Identities=25% Similarity=0.362 Sum_probs=8.2
Q ss_pred ccCChhHHHHHH
Q 018453 89 YDLSSVEIGLIT 100 (355)
Q Consensus 89 ~~~s~~~~~~~~ 100 (355)
+|.++.-.|++.
T Consensus 251 ~g~~~~F~G~iI 262 (368)
T COG0387 251 LGAPPAFVGLII 262 (368)
T ss_pred cCCCHHHHHHHH
Confidence 788876666653
No 372
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=26.14 E-value=5.1e+02 Score=26.74 Aligned_cols=46 Identities=22% Similarity=0.124 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHH
Q 018453 150 MVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGM 196 (355)
Q Consensus 150 ~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~ 196 (355)
+++.-++.|.+.|....++...+.-+.... -...++++..+.-+++
T Consensus 186 vl~~a~~gG~~~Gaa~Gv~~Gli~~l~~~~-~~~~~~~~af~GLlaG 231 (764)
T TIGR02865 186 VLLISYIGGSGAGAAGGVVIGVILGLANNA-NLYQIGVFGFAGLLGG 231 (764)
T ss_pred HHHHHHhcCchHhHHHHHHHHHHHHhcCcc-HHHHHHHHHHHHHHHH
Confidence 334445566666666666666665555332 2445555555444443
No 373
>PRK11715 inner membrane protein; Provisional
Probab=26.14 E-value=5.8e+02 Score=24.30 Aligned_cols=61 Identities=15% Similarity=0.155 Sum_probs=34.3
Q ss_pred ccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHH
Q 018453 122 GRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLIS 186 (355)
Q Consensus 122 Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~ 186 (355)
..=.-+++|+.+...-.++.+++.+... ..+.++.. +........|+.-.....+||..++
T Consensus 330 HpiQYlLVGlAl~lFYLLLLSlSEHigF-~~AYliAa---~a~v~li~~Y~~~vl~~~k~g~~~~ 390 (436)
T PRK11715 330 HPVQYLLVGLALVLFYLLLLSLSEHIGF-TLAYLIAA---LACVLLIGFYLSAVLRSWKRGLLFA 390 (436)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhhch-HHHHHHHH---HHHHHHHHHHHHHHHhcchHHHHHH
Confidence 3344566777777777777777665432 22333222 2233444556677776777765553
No 374
>PRK14217 camphor resistance protein CrcB; Provisional
Probab=25.82 E-value=3.1e+02 Score=21.14 Aligned_cols=74 Identities=12% Similarity=0.117 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHhhhhHHH-----HHHHHHHHHHHHhhHHhHHHHHHHh
Q 018453 103 SLYGALIGSILAFNIADILGRR---RELILAALLYLVGALVTALAPDFII-----MVVGRFVFGIGIGLAMHAAPMYIAE 174 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr~Grr---~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~r~l~G~~~g~~~~~~~~~~~e 174 (355)
..+|..+|...=-.++..+.++ ..-....++..+++++.++...+.. ---.|.+.+.|.-+.++...++..|
T Consensus 9 V~iGG~lGa~~Ry~l~~~~~~~~~~~fP~gTl~VNi~GsfllG~~~~~~~~~~~~~~~~~~~l~tGflGgfTTFSTf~~E 88 (134)
T PRK14217 9 VAIGGSLGAMSRYLVTIMAQNAWGIKFPYGTLLVNTLGSFLAGFFLIVLVGRFSAEESFRLFLFTGFLGAFTTFSSFAAE 88 (134)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHhchhccHHHHHHH
Confidence 4456666665433333322211 1112344455566665554332110 0013444444444455666666666
Q ss_pred hc
Q 018453 175 TA 176 (355)
Q Consensus 175 ~~ 176 (355)
..
T Consensus 89 ~~ 90 (134)
T PRK14217 89 SL 90 (134)
T ss_pred HH
Confidence 55
No 375
>PRK14228 camphor resistance protein CrcB; Provisional
Probab=25.40 E-value=3e+02 Score=20.80 Aligned_cols=48 Identities=13% Similarity=0.127 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcC
Q 018453 130 AALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAP 177 (355)
Q Consensus 130 ~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~ 177 (355)
..++..+++++.++...+..---.|.+.+.|.-+.++...++..|...
T Consensus 40 Tl~vNi~G~fllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~ 87 (122)
T PRK14228 40 TLAVNVSGAALLGFLAGLALPKDAALLAGTAFVGAYTTFSTWMLETQR 87 (122)
T ss_pred HHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 444556666666554322111113444455555556666667666653
No 376
>COG1422 Predicted membrane protein [Function unknown]
Probab=25.22 E-value=4e+02 Score=22.18 Aligned_cols=25 Identities=12% Similarity=0.030 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHhhccccchhHHHHhHHHH
Q 018453 193 VLGMVGGYGIGSLLVDLVAGWRYMYGASTPL 223 (355)
Q Consensus 193 ~~g~~~~~~i~~~l~~~~~~w~~~~~~~~~~ 223 (355)
.+...++|.+.. . +..++.++.+++
T Consensus 32 ~ln~~f~P~i~~-----~-~p~lvilV~avi 56 (201)
T COG1422 32 ALNVVFGPLLSP-----L-PPHLVILVAAVI 56 (201)
T ss_pred HHHHHHhhhccc-----c-ccHHHHHHHHHH
Confidence 444555665544 2 455555555544
No 377
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=25.17 E-value=5.4e+02 Score=23.63 Aligned_cols=106 Identities=14% Similarity=0.168 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH---HHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHH-HHHH
Q 018453 97 GLITSGSLYGALIGSILAFNIADILGRRRELILAALLYL---VGALVTALAPDFIIMVVGRFVFGIGIGLAMHAA-PMYI 172 (355)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~-~~~~ 172 (355)
|....+..++..+.. +.+.+.+.+|.-+.+..+.++.. --.+....+.|......+-.+.|...|...+-. |.-+
T Consensus 50 GI~~laP~la~~l~~-vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~TIvFtIPVaL 128 (354)
T PF04346_consen 50 GIMALAPVLAAFLSP-VIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGATIVFTIPVAL 128 (354)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhcccEEeehhhhh
Confidence 333333444443333 34457778888888777777653 233344456676666666666665555442222 2233
Q ss_pred HhhcCCCchhHHHHHHH--HHHHHHHHHHHHHH
Q 018453 173 AETAPTPMRGQLISLKE--FFIVLGMVGGYGIG 203 (355)
Q Consensus 173 ~e~~~~~~r~~~~~~~~--~~~~~g~~~~~~i~ 203 (355)
.-.-+++++-.+.|+.. ....+|.+++.++.
T Consensus 129 gii~k~D~~y~a~Gil~GiitIPiG~~vggl~~ 161 (354)
T PF04346_consen 129 GIIEKEDHKYLAKGILAGIITIPIGCFVGGLIA 161 (354)
T ss_pred hhcChhhhHHHHHHHHHHHhhhCHHHHHHHHHH
Confidence 33333444444444432 22234444444443
No 378
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=25.14 E-value=2e+02 Score=22.31 Aligned_cols=23 Identities=13% Similarity=0.094 Sum_probs=17.2
Q ss_pred HHhhcCCCchhHHHHHHHHHHHH
Q 018453 172 IAETAPTPMRGQLISLKEFFIVL 194 (355)
Q Consensus 172 ~~e~~~~~~r~~~~~~~~~~~~~ 194 (355)
+.|++|+..|....+.+......
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~ 82 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSA 82 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHH
Confidence 57999999998887776654443
No 379
>COG3389 Uncharacterized protein conserved in archaea [Function unknown]
Probab=25.09 E-value=1.6e+02 Score=25.08 Aligned_cols=39 Identities=18% Similarity=0.072 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Q 018453 101 SGSLYGALIGSILAFNIADILGRRRELILAALLYLVGAL 139 (355)
Q Consensus 101 ~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~ 139 (355)
+.+.+++++....+-.+.=|+|||+++-.-..+.+...+
T Consensus 35 s~yyfv~Il~atlfill~Ik~~~kwI~r~i~~v~V~~~l 73 (277)
T COG3389 35 SVYYFVYILVATLFILLAIKLGRKWIFRGIYSVAVASVL 73 (277)
T ss_pred ceeeehhHHHHHHHHHhheeecceeeehhhhHHHHHHHH
Confidence 456677777777777888899999876554344333333
No 380
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=24.67 E-value=4.9e+02 Score=23.00 Aligned_cols=57 Identities=18% Similarity=0.047 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 018453 150 MVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV 207 (355)
Q Consensus 150 ~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 207 (355)
.-..|.+.|+-.- .+...++.+.-.+|++++--..-=.....+++.++-|+++-.+.
T Consensus 22 ~~~lr~~~g~~~v-lf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~ 78 (287)
T PF07760_consen 22 IPPLRVILGFPFV-LFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLN 78 (287)
T ss_pred hhHHHHHHHHHHH-HHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566888887654 44556778888888665543333344445555556666655443
No 381
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=24.67 E-value=9.5e+02 Score=26.34 Aligned_cols=19 Identities=21% Similarity=0.534 Sum_probs=13.2
Q ss_pred chhHHHHhHHHHHHHHHHH
Q 018453 212 GWRYMYGASTPLAVIMGMG 230 (355)
Q Consensus 212 ~w~~~~~~~~~~~~~~~~~ 230 (355)
+||.++.+.+...++.+..
T Consensus 807 ~W~lalv~la~~Pll~~~~ 825 (1228)
T KOG0055|consen 807 GWRLALVVLATFPLLILSG 825 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 8999888776665554443
No 382
>PRK14216 camphor resistance protein CrcB; Provisional
Probab=24.17 E-value=3.4e+02 Score=20.90 Aligned_cols=75 Identities=15% Similarity=0.197 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhccH--HHHHHHHHHHHHHHHHHHhhhhHHHH-----HHHHHHHHHHHhhHHhHHHHHHHh
Q 018453 102 GSLYGALIGSILAFNIADILGRR--RELILAALLYLVGALVTALAPDFIIM-----VVGRFVFGIGIGLAMHAAPMYIAE 174 (355)
Q Consensus 102 ~~~~~~~~~~~~~g~l~dr~Grr--~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~r~l~G~~~g~~~~~~~~~~~e 174 (355)
...+|..+|.+.=-.++....+. ..-....++..+++++.++......- --.|.+.+.|.-+.++...++..|
T Consensus 11 ~V~iGG~lGa~~Ry~l~~~~~~~~~~fP~gTl~vNv~GsfllG~~~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~E 90 (132)
T PRK14216 11 AVFAGGALGTLARAALSELAAPDPARWPWPTFTVNVVGAFLLGYFTTRLLERLPLSSYRRPLLGTGLCGGLTTFSTMQVE 90 (132)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhhhhccccchHHHHHH
Confidence 34566666666444444333211 11123444555666665554321100 013444555545556666666666
Q ss_pred hc
Q 018453 175 TA 176 (355)
Q Consensus 175 ~~ 176 (355)
..
T Consensus 91 ~~ 92 (132)
T PRK14216 91 TI 92 (132)
T ss_pred HH
Confidence 65
No 383
>KOG2568 consensus Predicted membrane protein [Function unknown]
Probab=24.02 E-value=6.8e+02 Score=24.38 Aligned_cols=7 Identities=14% Similarity=0.639 Sum_probs=3.7
Q ss_pred chhHHHH
Q 018453 212 GWRYMYG 218 (355)
Q Consensus 212 ~w~~~~~ 218 (355)
.|+..++
T Consensus 414 ~Wk~~Wv 420 (518)
T KOG2568|consen 414 DWKERWV 420 (518)
T ss_pred HHHHhhh
Confidence 5665443
No 384
>COG1811 Uncharacterized membrane protein, possible Na+ channel or pump [General function prediction only]
Probab=23.62 E-value=3.6e+02 Score=22.78 Aligned_cols=51 Identities=16% Similarity=0.249 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 018453 104 LYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGR 154 (355)
Q Consensus 104 ~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r 154 (355)
.+|.++|..+..++.||+.+-.+-..+.....++.-...-++|....+..-
T Consensus 13 l~G~iiG~l~~~klper~k~~l~~~~Gl~~l~iGI~m~~~~~n~~~~ilsl 63 (228)
T COG1811 13 LIGGIIGLLIGKKLPERIKDILMQCLGLAILGIGIKMALQAKNDIMILLAL 63 (228)
T ss_pred HHHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHH
Confidence 345566666666677777555555566666666666555566655554433
No 385
>PRK14207 camphor resistance protein CrcB; Provisional
Probab=23.54 E-value=3.3e+02 Score=20.61 Aligned_cols=75 Identities=13% Similarity=0.220 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHHHhccHHHH-HHHHHHHHHHHHHHHhhhhHHH-----HHHHHHHHHHHHhhHHhHHHHHHHhhc
Q 018453 103 SLYGALIGSILAFNIADILGRRREL-ILAALLYLVGALVTALAPDFII-----MVVGRFVFGIGIGLAMHAAPMYIAETA 176 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr~Grr~~~-~~~~~l~~~~~~~~~~~~~~~~-----~~~~r~l~G~~~g~~~~~~~~~~~e~~ 176 (355)
..+|..+|...=-.+.....++..+ ....++..+++++.++...+.. ---.|.+.+.|.-+.++.-.++..|..
T Consensus 9 V~lGg~~Ga~~R~~l~~~~~~~~~fP~~Tl~vNv~GsfllG~~~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~E~~ 88 (123)
T PRK14207 9 VAIGGGLGALARYYISGLLPVYKDFPVGTLLVNSIASFILGYLYGLLFWGFDVSPEWRAFLGTGFCGGLSTFSTFSYETF 88 (123)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHhhHhcccccHHHHHHHHH
Confidence 4456666665443333222221111 2334455556665554322210 001355556665556677777777765
Q ss_pred C
Q 018453 177 P 177 (355)
Q Consensus 177 ~ 177 (355)
.
T Consensus 89 ~ 89 (123)
T PRK14207 89 S 89 (123)
T ss_pred H
Confidence 3
No 386
>PRK14227 camphor resistance protein CrcB; Provisional
Probab=23.51 E-value=3.3e+02 Score=20.62 Aligned_cols=75 Identities=15% Similarity=0.168 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHhhhhHHH-----HHHHHHHHHHHHhhHHhHHHHHHHh
Q 018453 103 SLYGALIGSILAFNIADILGRR---RELILAALLYLVGALVTALAPDFII-----MVVGRFVFGIGIGLAMHAAPMYIAE 174 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr~Grr---~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~r~l~G~~~g~~~~~~~~~~~e 174 (355)
..+|..+|...=-.+...+.++ ..-....++..+++++.++...+.. ---.|.+.+.|.-+.++.-.++..|
T Consensus 7 V~~Gg~~Ga~~Ry~l~~~~~~~~~~~fP~gTl~vN~~GsfllG~~~~~~~~~~~~~~~~~l~l~tGf~GgfTTFSTf~~E 86 (124)
T PRK14227 7 VAIGGSIGAILRYFTGVYSAKNLGLDFPYGTLIVNSVGSFILSFFMILFLEKLSLDPLWRLFVAVGFCGSFTTFSSFTYE 86 (124)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCcCCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHhhHhcccccHHHHHHH
Confidence 4456666665443333322111 1112334455555555554322210 0113444555555556666777777
Q ss_pred hcC
Q 018453 175 TAP 177 (355)
Q Consensus 175 ~~~ 177 (355)
...
T Consensus 87 ~~~ 89 (124)
T PRK14227 87 TIA 89 (124)
T ss_pred HHH
Confidence 653
No 387
>PF01405 PsbT: Photosystem II reaction centre T protein; InterPro: IPR001743 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbT found in PSII, which is thought to be associated with the D1 (PsbA) - D2 (PsbD) heterodimer. PsbT may be involved in the formation and/or stabilisation of dimeric PSII complexes, because in the absence of this protein dimeric PSII complexes were found to be less abundant. Furthermore, although PsbT does not confer photo-protection, it is required for the efficient recovery of photo-damaged PSII [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3BZ1_T 1S5L_t 2AXT_t 3KZI_T 3PRQ_T 3BZ2_T 3PRR_T 4FBY_g 3A0H_t 3A0B_T ....
Probab=23.47 E-value=1.4e+02 Score=16.21 Aligned_cols=8 Identities=25% Similarity=0.650 Sum_probs=2.3
Q ss_pred hhcccchh
Q 018453 232 WWLPASPR 239 (355)
Q Consensus 232 ~~~~esp~ 239 (355)
.+++|.|+
T Consensus 21 I~FRePPr 28 (29)
T PF01405_consen 21 IFFREPPR 28 (29)
T ss_dssp HHSS----
T ss_pred hhccCCCC
Confidence 44677765
No 388
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=23.44 E-value=1.4e+02 Score=16.72 Aligned_cols=21 Identities=10% Similarity=0.196 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 018453 100 TSGSLYGALIGSILAFNIADI 120 (355)
Q Consensus 100 ~~~~~~~~~~~~~~~g~l~dr 120 (355)
.++..+..++.+++.+|+-+|
T Consensus 14 LAAP~iagIi~s~iv~w~~~R 34 (35)
T PF13940_consen 14 LAAPIIAGIIASLIVGWLRNR 34 (35)
T ss_pred hHhHHHHHHHHHHHHHHHHhc
Confidence 345667777777777777654
No 389
>PRK14198 camphor resistance protein CrcB; Provisional
Probab=23.18 E-value=3.4e+02 Score=20.59 Aligned_cols=73 Identities=18% Similarity=0.201 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHHHH----hccHHHHHHHHHHHHHHHHHHHhhhhHHH-----HHHHHHHHHHHHhhHHhHHHHHHH
Q 018453 103 SLYGALIGSILAFNIADI----LGRRRELILAALLYLVGALVTALAPDFII-----MVVGRFVFGIGIGLAMHAAPMYIA 173 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr----~Grr~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~r~l~G~~~g~~~~~~~~~~~ 173 (355)
..+|..+|...=-.+... ++.. .-....++..+++++.++...... ---.|.+.+.|.-+.++.-.++..
T Consensus 6 V~~GG~lGa~~Ry~l~~~~~~~~~~~-fP~~Tl~vN~~GsfllG~l~~~~~~~~~~~~~~~~~l~tGflGgfTTFSTf~~ 84 (124)
T PRK14198 6 VFVGGGLGASLRHAVNMASARLLGTS-FPYGTFIINVSGSLVMGLIAGYLAFKGGAPQHWRLFLMTGILGGYTTFSAFSL 84 (124)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC-CcHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHhcccccHHHHHH
Confidence 345556665543333322 2321 112344555666666655332211 011455555555555666666666
Q ss_pred hhc
Q 018453 174 ETA 176 (355)
Q Consensus 174 e~~ 176 (355)
|..
T Consensus 85 e~~ 87 (124)
T PRK14198 85 DAA 87 (124)
T ss_pred HHH
Confidence 665
No 390
>PRK14222 camphor resistance protein CrcB; Provisional
Probab=23.12 E-value=3.4e+02 Score=20.56 Aligned_cols=73 Identities=16% Similarity=0.209 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHH----HhccHHHHHHHHHHHHHHHHHHHhhhhHHHH-----HHHHHHHHHHHhhHHhHHHHHHH
Q 018453 103 SLYGALIGSILAFNIAD----ILGRRRELILAALLYLVGALVTALAPDFIIM-----VVGRFVFGIGIGLAMHAAPMYIA 173 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~d----r~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~r~l~G~~~g~~~~~~~~~~~ 173 (355)
..+|..+|.+.=-.+.. +++.+ .-....++..+++++.++......- --.|.+.+.|.-+.++.-.++..
T Consensus 7 V~lGg~~Ga~~Ry~l~~~~~~~~~~~-fP~gTl~vN~~GsfllG~~~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~ 85 (124)
T PRK14222 7 IALFGALGCLARYYLSGWVYALFGRA-FPYGTLAVNVIGAFLIGLIMEFSLRSTLIPPTLRIGLTIGFLGGLTTFSTFSY 85 (124)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCC-CcHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHcccchhHHHHHH
Confidence 34555555554333332 23322 1123445566666666543322110 01344555555556677777777
Q ss_pred hhc
Q 018453 174 ETA 176 (355)
Q Consensus 174 e~~ 176 (355)
|..
T Consensus 86 E~~ 88 (124)
T PRK14222 86 ETF 88 (124)
T ss_pred HHH
Confidence 776
No 391
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=22.93 E-value=38 Score=25.97 Aligned_cols=14 Identities=21% Similarity=0.370 Sum_probs=6.2
Q ss_pred hHHHHhHHHHHHHH
Q 018453 214 RYMYGASTPLAVIM 227 (355)
Q Consensus 214 ~~~~~~~~~~~~~~ 227 (355)
||++++..+++++.
T Consensus 1 RW~l~~iii~~i~l 14 (130)
T PF12273_consen 1 RWVLFAIIIVAILL 14 (130)
T ss_pred CeeeHHHHHHHHHH
Confidence 45555444444333
No 392
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=22.90 E-value=7e+02 Score=24.15 Aligned_cols=19 Identities=16% Similarity=0.030 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 018453 103 SLYGALIGSILAFNIADIL 121 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr~ 121 (355)
..+...+...+.+++.|+.
T Consensus 15 ~~~~~~~~~~~~~~iid~~ 33 (529)
T TIGR02857 15 GALLIIAQAWLLARVIDGL 33 (529)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 3334444555666777765
No 393
>TIGR00494 crcB crcB protein. The role of this protein is uncharacterized, but phenotypes associated with overproduction include resistance to camphor, suppression of a mukB chromosomal partition mutant, and chromosome condensation, together suggesting a function related to chromosome folding.
Probab=22.83 E-value=3.3e+02 Score=20.33 Aligned_cols=25 Identities=16% Similarity=0.228 Sum_probs=15.8
Q ss_pred HHHHHHHHHhhHHhHHHHHHHhhcC
Q 018453 153 GRFVFGIGIGLAMHAAPMYIAETAP 177 (355)
Q Consensus 153 ~r~l~G~~~g~~~~~~~~~~~e~~~ 177 (355)
.|.+.+.|.-+.++...++..|...
T Consensus 61 ~~~~l~tGf~GgfTTFSTf~~e~~~ 85 (117)
T TIGR00494 61 LKLLIGTGFLGGFTTFSTFSLETTS 85 (117)
T ss_pred HHHHHHhhhccCcccHHHHHHHHHH
Confidence 3455566655566777777777763
No 394
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=22.76 E-value=6.7e+02 Score=23.84 Aligned_cols=98 Identities=15% Similarity=0.085 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 018453 128 ILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIGSLLV 207 (355)
Q Consensus 128 ~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 207 (355)
++-..+..++.+++=.......--+=..+.|++....+.+..++ .|+-|...+..-.+..+-..++-.+.+.+
T Consensus 302 iLFI~LTF~~fflfE~~~~~~iHpiQY~LVGlAl~lFYlLLLSl------SEhi~F~~AYliAa~a~i~Li~~Y~~~vl- 374 (430)
T PF06123_consen 302 ILFIGLTFLAFFLFELLSKLRIHPIQYLLVGLALVLFYLLLLSL------SEHIGFNLAYLIAALACIGLISLYLSSVL- 374 (430)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHH------HhhhchHHHHHHHHHHHHHHHHHHHHHHH-
Q ss_pred ccccchhHHHHhHHHHHHHHHHHHhhcc
Q 018453 208 DLVAGWRYMYGASTPLAVIMGMGMWWLP 235 (355)
Q Consensus 208 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 235 (355)
.+|+....+.+.+.++-.+++..+.
T Consensus 375 ---~~~k~~~~~~~~L~~LY~~Ly~lLq 399 (430)
T PF06123_consen 375 ---KSWKRGLIFAGLLAALYGFLYVLLQ 399 (430)
T ss_pred ---hcchHHHHHHHHHHHHHHHHHHHHH
No 395
>PRK03818 putative transporter; Validated
Probab=21.65 E-value=7.8e+02 Score=24.25 Aligned_cols=24 Identities=25% Similarity=0.247 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 018453 95 EIGLITSGSLYGALIGSILAFNIA 118 (355)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~g~l~ 118 (355)
+.|+...++.+|.-.|.-+..-+-
T Consensus 64 ~~gl~lFv~~vGl~~Gp~f~~~l~ 87 (552)
T PRK03818 64 EFGLILFVYTIGIQVGPGFFSSLR 87 (552)
T ss_pred HHHHHHHHHHHhhcccHHHHHHHH
Confidence 355666666666666665555443
No 396
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=21.20 E-value=6.5e+02 Score=23.17 Aligned_cols=104 Identities=17% Similarity=0.146 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHh--hhhH-------------H-HH-HHH---H-HHHHHHH
Q 018453 105 YGALIGSILAFNIADILG--RRRELILAALLYLVGALVTAL--APDF-------------I-IM-VVG---R-FVFGIGI 161 (355)
Q Consensus 105 ~~~~~~~~~~g~l~dr~G--rr~~~~~~~~l~~~~~~~~~~--~~~~-------------~-~~-~~~---r-~l~G~~~ 161 (355)
+..+..+++.-.+.|+.| ++..+..+..+.+++.++... ..|+ . .+ .+. | .+.|+.+
T Consensus 174 ~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~~~a~~~i~~d~ril~LG~~q 253 (354)
T PF05631_consen 174 VVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGSFREAWRAILSDPRILLLGLIQ 253 (354)
T ss_pred HHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHHHHHHHHHHHcCchhHHHHHHH
Confidence 444555666666777764 577777777777777665543 1111 0 00 111 1 4678888
Q ss_pred hhHHhHHHHHHHhhcCCCc---hhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 018453 162 GLAMHAAPMYIAETAPTPM---RGQLISLKEFFIVLGMVGGYGIGSLLVD 208 (355)
Q Consensus 162 g~~~~~~~~~~~e~~~~~~---r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 208 (355)
......++.++-.|.|.=. +..=.|+......+..++|..+-..+..
T Consensus 254 slFE~smy~FVflWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~l~s 303 (354)
T PF05631_consen 254 SLFEGSMYLFVFLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSRLLS 303 (354)
T ss_pred HHHHHHHHHheeeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 8889999999999887432 3445666666666667777766655543
No 397
>PF04474 DUF554: Protein of unknown function (DUF554); InterPro: IPR007563 This is a family of uncharacterised prokaryotic proteins. Multiple predicted transmembrane regions suggest that the protein is membrane associated.
Probab=21.07 E-value=3.1e+02 Score=23.37 Aligned_cols=59 Identities=22% Similarity=0.326 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Q 018453 103 SLYGALIGSILAFNIADILGRRRELILAALLYLVGALVTALAPDFIIMVVGRFVFGIGIG 162 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~l~G~~~g 162 (355)
..+|..+|..+..++.||+.......++.+...++.-...-.++...+ +.-.+.|.-.|
T Consensus 11 Il~G~~iG~~~~~~i~~~~~~~l~~~~Gl~~l~iGi~~~~~~~~~~~v-i~slvlG~iiG 69 (226)
T PF04474_consen 11 ILLGGLIGLLLGRRIPERIKDTLMQALGLCVLAIGISMALKGQNPLLV-ILSLVLGTIIG 69 (226)
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHhhHHHHHHHHHHHHccCccHHH-HHHHHHHHHHH
Confidence 345566666666666777766555566666666665544434444333 33444444333
No 398
>PF05232 BTP: Bacterial Transmembrane Pair family; InterPro: IPR007896 This domain represents a conserved pair of transmembrane helices. It appears to be found as two tandem repeats in a family of hypothetical proteins.
Probab=21.01 E-value=1.3e+02 Score=20.02 Aligned_cols=36 Identities=17% Similarity=0.122 Sum_probs=30.4
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Q 018453 89 YDLSSVEIGLITSGSLYGALIGSILAFNIADILGRR 124 (355)
Q Consensus 89 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr 124 (355)
+|.+..+.+.+.....+.+++-+.+..++-||+=+|
T Consensus 29 ~~~~~~~a~~l~v~~s~~a~~wn~ifN~~FD~~~~r 64 (67)
T PF05232_consen 29 LGISLWQAGALDVGLSLFAMVWNYIFNWLFDKIEPR 64 (67)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 567788888888888899999999999999997554
No 399
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=20.90 E-value=7.1e+02 Score=23.43 Aligned_cols=48 Identities=10% Similarity=-0.042 Sum_probs=25.4
Q ss_pred HHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 018453 155 FVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIG 203 (355)
Q Consensus 155 ~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 203 (355)
++.|+..|........++ |...-++---+.++...+...|.+...+..
T Consensus 297 ~iiG~iag~v~~~~~~~~-~~~~iDD~~~~~~vHg~~Gi~G~i~~glf~ 344 (404)
T TIGR03644 297 TLIGAVGGVIVVFSIVLL-DKLKIDDPVGAISVHGVAGIWGTLVVPITN 344 (404)
T ss_pred HHHHHHHHHHHHHHHHHH-HhCCCCCCcCchHhhhHHHHHHHHHHHHhc
Confidence 344555554444444443 445445544556666666666666555553
No 400
>PF14851 FAM176: FAM176 family
Probab=20.86 E-value=3.1e+02 Score=21.77 Aligned_cols=28 Identities=25% Similarity=0.202 Sum_probs=19.6
Q ss_pred hhHHHHHHHHHHHHHHHhhHHhHHHHHH
Q 018453 145 PDFIIMVVGRFVFGIGIGLAMHAAPMYI 172 (355)
Q Consensus 145 ~~~~~~~~~r~l~G~~~g~~~~~~~~~~ 172 (355)
....--+++.|+.|+|.|...+++...+
T Consensus 16 ~~~PE~~aLYFv~gVC~GLlLtLcllV~ 43 (153)
T PF14851_consen 16 RDNPERFALYFVSGVCAGLLLTLCLLVI 43 (153)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4445566778888888888777766543
No 401
>PF11298 DUF3099: Protein of unknown function (DUF3099); InterPro: IPR021449 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=20.84 E-value=2.6e+02 Score=19.08 Aligned_cols=30 Identities=17% Similarity=0.207 Sum_probs=21.5
Q ss_pred HHHhccHHHHHHHHHHHHHHHHHHHhhhhH
Q 018453 118 ADILGRRRELILAALLYLVGALVTALAPDF 147 (355)
Q Consensus 118 ~dr~Grr~~~~~~~~l~~~~~~~~~~~~~~ 147 (355)
-|+-.|++.+.+.+.+-..+.++..+....
T Consensus 11 ~d~~~R~r~Y~i~M~~Ri~~fvlA~~~~~~ 40 (73)
T PF11298_consen 11 QDQRRRRRRYLIMMGIRIPCFVLAAVVYRL 40 (73)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 466778888888888777777776665543
No 402
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=20.80 E-value=1.2e+02 Score=28.18 Aligned_cols=54 Identities=13% Similarity=0.071 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHH
Q 018453 149 IMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGI 202 (355)
Q Consensus 149 ~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i 202 (355)
+++++-...-+|.=+.-....-.+.|..|..+|....|+.+.....=.++.-++
T Consensus 388 ll~agVaaaR~GLW~fDlAVtqimQe~VpEseR~vv~gvqnsL~~~ldll~~il 441 (503)
T KOG2601|consen 388 LLFAGVAAARLGLWMFDLAVTQIMQETVPESERCVVFGVQNSLNSALDLLKDIL 441 (503)
T ss_pred HHHHHHHHHHhhHHhccHHHHHHHHHhcchhhhhhhHhHHHHHHHHHHHHHHhE
Confidence 333333333344444556667788999999999999999887766655554443
No 403
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=20.79 E-value=91 Score=20.10 Aligned_cols=20 Identities=25% Similarity=0.381 Sum_probs=16.6
Q ss_pred chhHHHHhHHHHHHHHHHHH
Q 018453 212 GWRYMYGASTPLAVIMGMGM 231 (355)
Q Consensus 212 ~w~~~~~~~~~~~~~~~~~~ 231 (355)
|||...++.+++.++.+.+.
T Consensus 4 g~r~~~~~ggfVg~iG~a~Y 23 (58)
T PF15061_consen 4 GWRYALFVGGFVGLIGAALY 23 (58)
T ss_pred cccchhhHHHHHHHHHHHHh
Confidence 89999999999988866554
No 404
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=20.77 E-value=3.1e+02 Score=19.28 Aligned_cols=40 Identities=15% Similarity=0.029 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHhcc-------HHHHHHHHHHHHHHHHHHHhhhh
Q 018453 107 ALIGSILAFNIADILGR-------RRELILAALLYLVGALVTALAPD 146 (355)
Q Consensus 107 ~~~~~~~~g~l~dr~Gr-------r~~~~~~~~l~~~~~~~~~~~~~ 146 (355)
...+.+..+++.+|..+ ++.+.++.++...+.++++...+
T Consensus 31 ~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS 77 (86)
T PF10785_consen 31 ATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRS 77 (86)
T ss_pred HHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 33455555666666544 67777777777777777776544
No 405
>PRK11875 psbT photosystem II reaction center protein T; Reviewed
Probab=20.36 E-value=1.7e+02 Score=16.08 Aligned_cols=8 Identities=13% Similarity=0.256 Sum_probs=5.0
Q ss_pred hhcccchh
Q 018453 232 WWLPASPR 239 (355)
Q Consensus 232 ~~~~esp~ 239 (355)
.+++|.|+
T Consensus 21 IfFRepPr 28 (31)
T PRK11875 21 IAFRDPPK 28 (31)
T ss_pred hhccCCCC
Confidence 34677775
No 406
>PRK14208 camphor resistance protein CrcB; Provisional
Probab=20.31 E-value=4e+02 Score=20.30 Aligned_cols=73 Identities=15% Similarity=0.077 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHH----hccHHHHHHHHHHHHHHHHHHHhhhhHHHH-----HHHHHHHHHHHhhHHhHHHHHHH
Q 018453 103 SLYGALIGSILAFNIADI----LGRRRELILAALLYLVGALVTALAPDFIIM-----VVGRFVFGIGIGLAMHAAPMYIA 173 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr----~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~r~l~G~~~g~~~~~~~~~~~ 173 (355)
..+|..+|...=-.+... +++. .-....++..+++++.++......- -..|.+.+.|.-+.++.-.++..
T Consensus 7 V~~GG~~Ga~~Ry~l~~~~~~~~~~~-fP~~Tl~vNi~GsfllG~~~~~~~~~~~~~~~~~~~l~tGflGgfTTFSTf~~ 85 (126)
T PRK14208 7 VCLGGALGSGARYLTSAWALRAFGPD-FPRGTLLVNVSGSFLLAGIMTASLQSEAVPPDLRLFLAAGVMGGFTTYSSFNY 85 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC-CcHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHhcchhhHHHHHH
Confidence 445555665543333322 2221 1123455566666666554322100 01455555555555666677776
Q ss_pred hhc
Q 018453 174 ETA 176 (355)
Q Consensus 174 e~~ 176 (355)
|..
T Consensus 86 e~~ 88 (126)
T PRK14208 86 ETL 88 (126)
T ss_pred HHH
Confidence 765
No 407
>COG1079 Uncharacterized ABC-type transport system, permease component [General function prediction only]
Probab=20.28 E-value=6.4e+02 Score=22.66 Aligned_cols=96 Identities=10% Similarity=-0.086 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH-HHHh-hhhHHHHHHHHHHHHHHHhhHHhHHHHHHHhhcCCCchhHH
Q 018453 107 ALIGSILAFNIADILGRRRELILAALLYLVGAL-VTAL-APDFIIMVVGRFVFGIGIGLAMHAAPMYIAETAPTPMRGQL 184 (355)
Q Consensus 107 ~~~~~~~~g~l~dr~Grr~~~~~~~~l~~~~~~-~~~~-~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~ 184 (355)
-++..-+++.+++|-|.-++-+=|..+.+.... +... ..+.|.=+ +.|...|........++......++--..
T Consensus 20 PLllaaLG~l~sERsGVlNIglEG~M~~gAf~~~~~~~~t~spw~gl----~~a~l~g~l~~ll~a~~ti~l~~nqiisG 95 (304)
T COG1079 20 PLLLAALGGLFSERSGVLNIGLEGIMLLGAFSGALFAYGTGSPWLGL----LAAALVGALFGLLHAFLTIKLRANQIISG 95 (304)
T ss_pred HHHHHHHHHHHHHHhceeeechhhHHHHHHHHHHHHHHccccHHHHH----HHHHHHHHHHHHHHHHHHHhhccccchhH
Confidence 345556788899998875544433333322222 1111 23444333 33444455566667777777777888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 018453 185 ISLKEFFIVLGMVGGYGIGSLL 206 (355)
Q Consensus 185 ~~~~~~~~~~g~~~~~~i~~~l 206 (355)
.++...+.++..+++..+.+..
T Consensus 96 ~alnl~a~Glt~fl~~~~~~~~ 117 (304)
T COG1079 96 LALNLLASGLTAFLGQSIFGQP 117 (304)
T ss_pred HHHHHHHHHHHHHHHHHHhccC
Confidence 8888888888888877776654
No 408
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=20.27 E-value=7.3e+02 Score=23.33 Aligned_cols=50 Identities=8% Similarity=0.024 Sum_probs=29.6
Q ss_pred HHHHHHHHhhHHhHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 018453 154 RFVFGIGIGLAMHAAPMYIAETAPTPMRGQLISLKEFFIVLGMVGGYGIG 203 (355)
Q Consensus 154 r~l~G~~~g~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 203 (355)
-++.|+..|........++.+...-++---..++...+..+|.+..++++
T Consensus 282 A~viG~iag~~~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa 331 (403)
T TIGR00836 282 AIIIGLVAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATGLFA 331 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCcccchhhhhhHHHHHHHHHHhc
Confidence 34556655555555555566666555544566677766666666666654
No 409
>PRK14195 camphor resistance protein CrcB; Provisional
Probab=20.10 E-value=4e+02 Score=20.22 Aligned_cols=74 Identities=11% Similarity=0.118 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHHh----ccHHHHHHHHHHHHHHHHHHHhhhhHHH-----HHHHHHHHHHHHhhHHhHHHHHHH
Q 018453 103 SLYGALIGSILAFNIADIL----GRRRELILAALLYLVGALVTALAPDFII-----MVVGRFVFGIGIGLAMHAAPMYIA 173 (355)
Q Consensus 103 ~~~~~~~~~~~~g~l~dr~----Grr~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~r~l~G~~~g~~~~~~~~~~~ 173 (355)
..+|..+|.+.=-.+...+ +.. .-....++..+++++.++...+.. ---.|.+.+.|.-+.++.-.++..
T Consensus 7 V~~Gg~~Ga~~Ry~l~~~~~~~~~~~-fP~gTl~vNi~GsfllG~~~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~ 85 (125)
T PRK14195 7 VAAGGALGSVARYLVGVGALRLMGPA-FPWGTLAVNVTGSFLIGVLAGLLAHRWNASQEWRLFLIVGVLGGFTTFSAFSL 85 (125)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCC-CchHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHhHhccCcccHHHHHH
Confidence 4456666665433333222 211 112344455566665555432211 001344555555555666677777
Q ss_pred hhcC
Q 018453 174 ETAP 177 (355)
Q Consensus 174 e~~~ 177 (355)
|...
T Consensus 86 e~~~ 89 (125)
T PRK14195 86 DAAL 89 (125)
T ss_pred HHHH
Confidence 7653
Done!