BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018454
(355 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q13823|NOG2_HUMAN Nucleolar GTP-binding protein 2 OS=Homo sapiens GN=GNL2 PE=1 SV=1
Length = 731
Score = 350 bits (899), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 176/357 (49%), Positives = 242/357 (67%), Gaps = 11/357 (3%)
Query: 1 MAKTKEKKVNVSGKPKHSLDANRTDGKSGS--RSASTVRRLNMYKTRPKRDRKGKVLQH- 57
M K K K + K S + +R G G R +T+RRLNMY+ + +R+ +GK+++
Sbjct: 1 MVKPKYKGRSTINPSKASTNPDRVQGAGGQNMRDRATIRRLNMYRQKERRNSRGKIIKPL 60
Query: 58 EFQSKELPNT--RIQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSL 115
++QS T R++P+ +WFGNTR + Q L+ F+EE+ + M Y V++++ KLP SL
Sbjct: 61 QYQSTVASGTVARVEPNIKWFGNTRVIKQSSLQKFQEEMDTVMKDPYKVVMKQSKLPMSL 120
Query: 116 LNDHQK--QARVHLLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDA 173
L+D + +VH+LDTE F+ FGPK +RKRP L ASD +SL++ A+ S ++++Q D
Sbjct: 121 LHDRIRPHNLKVHILDTESFETTFGPKSQRKRPNLFASDMQSLIENAEMSTESYDQGKDR 180
Query: 174 STSAEGVEGDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHL 233
E G R+ + +++KGQSKRIWGELYKVIDSSDVVVQVLDARDP GTR H+
Sbjct: 181 DLVTEDT---GVRNEAQEEIYKKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRSPHI 237
Query: 234 ERHLKEHCKHKHMILLLNKCDLVPAWATKGWLRVLSKEYPSLAFHASINKSFGKGSLLSV 293
E +LK+ KH+I +LNKCDLVP WATK W+ VLS++YP+LAFHAS+ FGKG+ + +
Sbjct: 238 ETYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLSQDYPTLAFHASLTNPFGKGAFIQL 297
Query: 294 LRQFARLKSDKQAISVGFVGYPNVGKSSVINTLRTKNVILFFP-ASVVWYWFYCQLL 349
LRQF +L +DK+ ISVGF+GYPNVGKSSVINTLR+K V P A W Y L+
Sbjct: 298 LRQFGKLHTDKKQISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETKVWQYITLM 354
>sp|Q99LH1|NOG2_MOUSE Nucleolar GTP-binding protein 2 OS=Mus musculus GN=Gnl2 PE=2 SV=2
Length = 728
Score = 350 bits (897), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 177/357 (49%), Positives = 241/357 (67%), Gaps = 11/357 (3%)
Query: 1 MAKTKEKKVNVSGKPKHSLDANRTDGKSGS--RSASTVRRLNMYKTRPKRDRKGKVLQH- 57
M K K K + + S + +R G G R T+RRLNMY+ + +R+ +GKV++
Sbjct: 1 MVKPKYKGRSTINRSAASTNPDRVQGAGGQNMRDRGTIRRLNMYRQKERRNSRGKVIKPL 60
Query: 58 EFQSKELPNT--RIQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSL 115
++QS T R++P+ +WFGNTR + Q L+ F+EE+ M Y V++++ KLP SL
Sbjct: 61 QYQSTVASGTVARVEPNIKWFGNTRVIKQASLQKFQEEMDKVMKDPYKVVMKQSKLPMSL 120
Query: 116 LND--HQKQARVHLLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDA 173
L+D A+VH+LDTE F+ FGPK +RKRP L ASD +SL++ A+ S ++++Q D
Sbjct: 121 LHDRIQPHNAKVHILDTESFESTFGPKSQRKRPNLFASDMQSLLENAEMSTESYDQGKDR 180
Query: 174 STSAEGVEGDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHL 233
+E G R+ + +++KGQSKRIWGELYKVIDSSDVVVQVLDARDP GTR H+
Sbjct: 181 DLV---MEDTGVRNEAQEEIYKKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRSPHI 237
Query: 234 ERHLKEHCKHKHMILLLNKCDLVPAWATKGWLRVLSKEYPSLAFHASINKSFGKGSLLSV 293
E +LK+ KH+I +LNKCDLVP WATK W+ VLS++YP+LAFHAS+ FGKG+ + +
Sbjct: 238 EAYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLSQDYPTLAFHASLTNPFGKGAFIQL 297
Query: 294 LRQFARLKSDKQAISVGFVGYPNVGKSSVINTLRTKNVILFFP-ASVVWYWFYCQLL 349
LRQF +L +DK+ ISVGF+GYPNVGKSSVINTLR+K V P A W Y L+
Sbjct: 298 LRQFGKLHTDKKQISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETKVWQYITLM 354
>sp|O14236|NOG2_SCHPO Nucleolar GTP-binding protein 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=nog2 PE=1 SV=1
Length = 537
Score = 342 bits (877), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 168/330 (50%), Positives = 221/330 (66%), Gaps = 3/330 (0%)
Query: 23 RTDGKSGSRSASTVRRLNMYKT-RPKRDRKGKVLQH-EFQSKELPNTRIQPDRRWFGNTR 80
R G++ R+A V R+NMY+ + K + G++++ EFQS E+P RIQPDRRWF NTR
Sbjct: 25 RVKGENFYRNAKDVARVNMYRGGKAKYNAAGELVRAAEFQSSEVPKARIQPDRRWFNNTR 84
Query: 81 CVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLNDHQKQARVHLLDTEPFQDAFGPK 140
+ Q L FRE + ++ Y V+LR KLP SLL ++ + +V +L++EPF++ FGPK
Sbjct: 85 VIAQPTLTQFREAMGQKLNDPYQVLLRRNKLPMSLLQENTEIPKVRVLESEPFENTFGPK 144
Query: 141 GKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTSAEGVEGDGFRDLVRHTMFEKGQSK 200
+RKRPK+ L K +D Q+A+E+K + A E D R +F KGQSK
Sbjct: 145 SQRKRPKISFDSVAELAKESDEKQNAYEEKIEERILANPDESDDVMLAARDAIFSKGQSK 204
Query: 201 RIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWA 260
RIW ELYKVIDSSDV++QVLDARDP GTRC +ER+L+ HKHMIL+LNK DLVP
Sbjct: 205 RIWNELYKVIDSSDVLIQVLDARDPVGTRCGTVERYLRNEASHKHMILVLNKVDLVPTSV 264
Query: 261 TKGWLRVLSKEYPSLAFHASINKSFGKGSLLSVLRQFARLKSDKQAISVGFVGYPNVGKS 320
W+++L+KEYP++AFHASIN SFGKGSL+ +LRQFA L SDK+ ISVG +G+PN GKS
Sbjct: 265 AAAWVKILAKEYPTIAFHASINNSFGKGSLIQILRQFASLHSDKKQISVGLIGFPNAGKS 324
Query: 321 SVINTLRTKNVILFFP-ASVVWYWFYCQLL 349
S+INTLR K V P W Y L+
Sbjct: 325 SIINTLRKKKVCNVAPIPGETKVWQYVALM 354
>sp|Q6C036|NOG2_YARLI Nucleolar GTP-binding protein 2 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=NOG2 PE=3 SV=1
Length = 509
Score = 335 bits (858), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 168/330 (50%), Positives = 219/330 (66%), Gaps = 6/330 (1%)
Query: 23 RTDGKSGSRSASTVRRLNMYKT-RPKRDRKGKVLQHE-FQSKELPNTRIQPDRRWFGNTR 80
R G + R A V++L+MYK R K + +G+ +Q FQSKE+PN RI P+RRWFGNTR
Sbjct: 25 RVKGVNFYRDAKKVKKLSMYKEGRAKHNARGEEVQAATFQSKEIPNARIDPNRRWFGNTR 84
Query: 81 CVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLNDHQKQARVHLLDTEPFQDAFGPK 140
+ Q L FRE L SY V+LR+ KLP SLL ++ K +V +++TE + + FGPK
Sbjct: 85 VIAQDALNHFREALGETKRDSYQVLLRQNKLPMSLLEENNKIPQVKVVETESYANTFGPK 144
Query: 141 GKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTSAEGVEGDGFRDLVRHTMFEKGQSK 200
+RK+P+L D+ L AD SQ FE K + S + DG+ + +F KGQSK
Sbjct: 145 AQRKKPQLAVGDFAELASAADESQQDFEAKKEEDNSWKV---DGWSQEAKEAIFHKGQSK 201
Query: 201 RIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWA 260
RIW ELYKVIDSSDVV+ VLDARDP GTRC +E+++K+ HKH+I +LNKCDLVP W
Sbjct: 202 RIWNELYKVIDSSDVVIHVLDARDPLGTRCTSVEQYIKKEAPHKHLIFVLNKCDLVPTWV 261
Query: 261 TKGWLRVLSKEYPSLAFHASINKSFGKGSLLSVLRQFARLKSDKQAISVGFVGYPNVGKS 320
W++ LS++YP+LAFHASI SFGKGSL+ +LRQ++ L D+Q ISVGF+GYPN GKS
Sbjct: 262 AAAWVKHLSQDYPTLAFHASITNSFGKGSLIQLLRQYSALHPDRQQISVGFIGYPNTGKS 321
Query: 321 SVINTLRTKNVILFFP-ASVVWYWFYCQLL 349
S+INTLR K V P W Y L+
Sbjct: 322 SIINTLRKKKVCKTAPIPGETKVWQYITLM 351
>sp|P53742|NOG2_YEAST Nucleolar GTP-binding protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=NOG2 PE=1 SV=1
Length = 486
Score = 328 bits (842), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 169/341 (49%), Positives = 223/341 (65%), Gaps = 11/341 (3%)
Query: 20 DAN-RTDGKSGSRSASTVRRLNMYKT-RPKRDRKGKVLQH-EFQSKELPNTRIQPDRRWF 76
D N R G++ R + V+ LNMY + + R++KG +++ FQ +P+ R+QPDRRWF
Sbjct: 19 DGNLRVKGENFYRDSKRVKFLNMYTSGKEIRNKKGNLIRAASFQDSTIPDARVQPDRRWF 78
Query: 77 GNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLN--DHQKQARVHLLDTEPFQ 134
GNTR ++Q L+ FR L +Y V+LR KLP SLL D + + +LDTE +
Sbjct: 79 GNTRVISQDALQHFRSALGETQKDTYQVLLRRNKLPMSLLEEKDADESPKARILDTESYA 138
Query: 135 DAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKN--DASTSAEGVEGD---GFRDLV 189
DAFGPK +RKRP+L AS+ E LVK + +E+K DA+ G + D G+
Sbjct: 139 DAFGPKAQRKRPRLAASNLEDLVKATNEDITKYEEKQVLDATLGLMGNQEDKENGWTSAA 198
Query: 190 RHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILL 249
+ +F KGQSKRIW ELYKVIDSSDVV+ VLDARDP GTRC +E ++K+ HKH+I +
Sbjct: 199 KEAIFSKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCKSVEEYMKKETPHKHLIYV 258
Query: 250 LNKCDLVPAWATKGWLRVLSKEYPSLAFHASINKSFGKGSLLSVLRQFARLKSDKQAISV 309
LNKCDLVP W W++ LSKE P+LAFHASI SFGKGSL+ +LRQF++L +D++ ISV
Sbjct: 259 LNKCDLVPTWVAAAWVKHLSKERPTLAFHASITNSFGKGSLIQLLRQFSQLHTDRKQISV 318
Query: 310 GFVGYPNVGKSSVINTLRTKNVILFFP-ASVVWYWFYCQLL 349
GF+GYPN GKSS+INTLR K V P W Y L+
Sbjct: 319 GFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLM 359
>sp|Q75DA4|NOG2_ASHGO Nucleolar GTP-binding protein 2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NOG2
PE=3 SV=1
Length = 502
Score = 324 bits (831), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 164/340 (48%), Positives = 219/340 (64%), Gaps = 10/340 (2%)
Query: 20 DAN-RTDGKSGSRSASTVRRLNMYKT-RPKRDRKGKVLQH-EFQSKELPNTRIQPDRRWF 76
D N R G++ R V+ LNMYK + R+ KG +++ QS ++P R+QPDRRWF
Sbjct: 19 DGNLRVKGENFYRDGKRVKFLNMYKGGKSIRNAKGDLIRAAPLQSTDVPTARVQPDRRWF 78
Query: 77 GNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLN--DHQKQARVHLLDTEPFQ 134
GNTR ++Q L+ FR+ L + SY V+LR KLP SLL D + ++DTEP+
Sbjct: 79 GNTRVISQDALQHFRDALGDKKNDSYQVLLRRNKLPMSLLEEKDTSESPTAKIIDTEPYG 138
Query: 135 DAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTS----AEGVEGDGFRDLVR 190
FGPK +RK+P++ A+ E L K D +E+K + ++ A + DG+ + +
Sbjct: 139 ATFGPKAQRKKPRVAAASLEDLAKATDSDSQKYEEKKELDSTLGLMAATEQEDGWSQVAK 198
Query: 191 HTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLL 250
+F KGQSKRIW ELYKVIDSSDVV+ VLDARDP GTRC +E ++K+ HKH+I +L
Sbjct: 199 EAIFHKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCKSVEEYMKKETPHKHLIYVL 258
Query: 251 NKCDLVPAWATKGWLRVLSKEYPSLAFHASINKSFGKGSLLSVLRQFARLKSDKQAISVG 310
NKCDLVP W W++ LSK+ P+LAFHASI SFGKGSL+ +LRQF++L D+Q ISVG
Sbjct: 259 NKCDLVPTWLAAAWVKHLSKDRPTLAFHASITNSFGKGSLIQLLRQFSQLHKDRQQISVG 318
Query: 311 FVGYPNVGKSSVINTLRTKNVILFFP-ASVVWYWFYCQLL 349
F+GYPN GKSS+INTLR K V P W Y L+
Sbjct: 319 FIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLM 358
>sp|Q6FWS1|NOG2_CANGA Nucleolar GTP-binding protein 2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=NOG2 PE=3 SV=1
Length = 494
Score = 321 bits (823), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 162/341 (47%), Positives = 224/341 (65%), Gaps = 11/341 (3%)
Query: 20 DAN-RTDGKSGSRSASTVRRLNMYKT-RPKRDRKGKVLQH-EFQSKELPNTRIQPDRRWF 76
D N R G++ R + V+ LNMYK+ + +++ G V++ ++Q +P+ R+QPDRRWF
Sbjct: 19 DGNIRVKGENFYRDSKRVQFLNMYKSGKAIKNKHGDVIRAADYQDTTIPDARVQPDRRWF 78
Query: 77 GNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLN--DHQKQARVHLLDTEPFQ 134
GNTR ++Q L+ FR+ L +Y V+LR KLP SLL+ D + R +L+TE F
Sbjct: 79 GNTRVISQDALQHFRDALGETQKDTYQVLLRRNKLPMSLLDEKDSTESPRARILETESFD 138
Query: 135 DAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKND--ASTSAEGVEGD---GFRDLV 189
FGPK +RK+P++ AS E LV+ + +E+K + A+ G + D G+ +
Sbjct: 139 QTFGPKAQRKKPRVAASSLEELVQATEEENKTYEEKEELKATLGLMGKQEDEENGWTQVT 198
Query: 190 RHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILL 249
+ +F KGQSKRIW ELYKVIDSSDVV+ VLDARDP GTRC +E ++K+ HKH+I +
Sbjct: 199 KEAIFSKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCKSVEEYMKKETPHKHLIYV 258
Query: 250 LNKCDLVPAWATKGWLRVLSKEYPSLAFHASINKSFGKGSLLSVLRQFARLKSDKQAISV 309
LNKCDLVP W W++ LSK+ P+LAFHASI SFGKGSL+ +LRQF++L +D++ ISV
Sbjct: 259 LNKCDLVPTWVAAAWVKHLSKDRPTLAFHASITNSFGKGSLIQLLRQFSQLHTDRKQISV 318
Query: 310 GFVGYPNVGKSSVINTLRTKNVILFFP-ASVVWYWFYCQLL 349
GF+GYPN GKSS+INTLR K V P W Y L+
Sbjct: 319 GFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLM 359
>sp|Q9C3Z4|NOG2_PNECA Nucleolar GTP-binding protein 2 OS=Pneumocystis carinii GN=NOG2
PE=2 SV=1
Length = 483
Score = 320 bits (820), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 160/303 (52%), Positives = 213/303 (70%), Gaps = 7/303 (2%)
Query: 31 RSASTVRRLNMYKT-RPKRDRKGKVL-QHEFQSKELPNTRIQPDRRWFGNTRCVNQKQLE 88
R A VR +N+ K+ + KR++ GK++ Q EFQSK++ + RIQP RRWF NTR ++Q L
Sbjct: 20 RDAKKVRWINLLKSGKAKRNKSGKIIKQGEFQSKDVQDARIQPYRRWFSNTRVISQDVLN 79
Query: 89 FFREELQSHMSSSYNVILREKKLPFSLLNDHQKQARVHLLDTEPFQDAFGPKGKRKRPKL 148
FRE ++ V+L++ KLP SLL + K + +++D EPF D FG K RKR KL
Sbjct: 80 MFRESFAEKLNDPCKVLLKQNKLPMSLLMEPTKTRKANIIDIEPFDDTFGKKSXRKRAKL 139
Query: 149 LASDYESLVKRADGSQDAFEQKNDASTSAEGVEGDGFRDLVRHTMFEKGQSKRIWGELYK 208
AS E+L A S + + +KN + E V+ + + +F KG SKRIW ELYK
Sbjct: 140 YASSIENLSNFAFESYENYIKKN---SEYENVDKNIQKSF--EAIFSKGTSKRIWNELYK 194
Query: 209 VIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATKGWLRVL 268
IDSSDV++Q+LDAR+P GTRC H+E +LK+ HKHMILLLNKCDL+P W T+ W++ L
Sbjct: 195 XIDSSDVIIQLLDARNPLGTRCKHVEEYLKKEKPHKHMILLLNKCDLIPTWCTREWIKQL 254
Query: 269 SKEYPSLAFHASINKSFGKGSLLSVLRQFARLKSDKQAISVGFVGYPNVGKSSVINTLRT 328
SKEYP+LAFHASIN FGKGSL+ +LRQF++L S+++ ISVGF+GYPN GKSSVINTLR+
Sbjct: 255 SKEYPTLAFHASINNPFGKGSLIQLLRQFSKLHSNRRQISVGFIGYPNTGKSSVINTLRS 314
Query: 329 KNV 331
K V
Sbjct: 315 KKV 317
>sp|Q6CSP9|NOG2_KLULA Nucleolar GTP-binding protein 2 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=NOG2 PE=3 SV=1
Length = 513
Score = 319 bits (818), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 164/340 (48%), Positives = 210/340 (61%), Gaps = 10/340 (2%)
Query: 20 DAN-RTDGKSGSRSASTVRRLNMYKT-RPKRDRKGKVLQH-EFQSKELPNTRIQPDRRWF 76
D N R G++ R V+ LNMYK R R+ KG +++ Q P R+ PDRRWF
Sbjct: 19 DGNLRVKGENFYRDTKRVQFLNMYKGGRSVRNAKGDIIKAAPLQDTAAPTARVAPDRRWF 78
Query: 77 GNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLN--DHQKQARVHLLDTEPFQ 134
GNTR ++Q L FRE L + SY V+LR KLP SLLN D + +L+TEPF+
Sbjct: 79 GNTRVISQDSLSHFREALGENKRDSYQVLLRRNKLPMSLLNEKDSAESPTAKILETEPFE 138
Query: 135 DAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTS----AEGVEGDGFRDLVR 190
FGPK +RK+P++ AS E L+ FE+K + ++ + E DG+ +
Sbjct: 139 QTFGPKAQRKKPRIAASSLEELISSTSTDNKTFEEKQELDSTLGLMGKQEEEDGWTQAAK 198
Query: 191 HTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLL 250
+F KGQSKRIW ELYKVIDSSDVV+ VLDARDP GTRC + ++ HKH+I +L
Sbjct: 199 EAIFHKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCKSVTDYMTNETPHKHLIYVL 258
Query: 251 NKCDLVPAWATKGWLRVLSKEYPSLAFHASINKSFGKGSLLSVLRQFARLKSDKQAISVG 310
NKCDLVP W W++ LSKE P+LAFHASI SFGKGSL+ +LRQF++L D+ ISVG
Sbjct: 259 NKCDLVPTWVAAAWVKHLSKERPTLAFHASITNSFGKGSLIQLLRQFSQLHKDRHQISVG 318
Query: 311 FVGYPNVGKSSVINTLRTKNVILFFP-ASVVWYWFYCQLL 349
F+GYPN GKSS+INTLR K V P W Y L+
Sbjct: 319 FIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLM 358
>sp|J9VQ03|NOG2_CRYNH Nucleolar GTP-binding protein 2 OS=Cryptococcus neoformans var.
grubii serotype A (strain H99 / ATCC 208821 / CBS 10515
/ FGSC 9487) GN=NOG2 PE=3 SV=2
Length = 720
Score = 291 bits (746), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 159/341 (46%), Positives = 209/341 (61%), Gaps = 24/341 (7%)
Query: 30 SRSASTVRRLNMYKTRPKRDRKGKVLQHE-FQ--SKELPNTRIQPDRRWFGNTRCVNQKQ 86
++SAS V+ LN K RDR GK+++ FQ KE R++PDRRWFGNTR ++Q
Sbjct: 43 AKSASRVKMLNGGKA--VRDRDGKIVEAAAFQKGEKEAEPGRVKPDRRWFGNTRVISQSA 100
Query: 87 LEFFREELQSHMSSSYNVILREKKLPFSLLNDHQKQA--RVHLLDTEPFQDAFGPKGKRK 144
L+ FR L+ + Y+V+L+ KLP LL D K R H+++TEPF + FGPK +RK
Sbjct: 101 LDHFRTALKEQKADPYSVLLKRNKLPMGLLQDDTKDGGRRPHIVETEPFGNTFGPKAQRK 160
Query: 145 RPKLLASDYESLVKRADGSQDAFEQKNDASTSAEGVEGDGFRDLV----------RHTMF 194
RP+L E L S A A T+ +G+G DL R ++
Sbjct: 161 RPRLDIGSIEEL----GESSAASAAAAAAETATAESQGNGTADLADIYHPTTSTAREPIY 216
Query: 195 EKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCD 254
KG S+RIWGELYKV+DSSDVV+ VLDARDP GTRC + +L++ HKH++ +LNK D
Sbjct: 217 AKGTSRRIWGELYKVLDSSDVVIHVLDARDPLGTRCKPVVEYLRKEKAHKHLVYVLNKVD 276
Query: 255 LVPAWATKGWLRVLSKEYPSLAFHASINKSFGKGSLLSVLRQFARLKSDKQAISVGFVGY 314
LVP W T W++ LS P++AFHASIN SFGKGSL+ +LRQF+ L SDK+ ISVGF+GY
Sbjct: 277 LVPTWVTARWVKHLSLSAPTIAFHASINNSFGKGSLIQLLRQFSVLHSDKKQISVGFIGY 336
Query: 315 PNVGKSSVINTLRTKNVILFFP---ASVVWYWFYCQLLFYF 352
PN GKSS+INTL+ K V P + VW + Y
Sbjct: 337 PNTGKSSIINTLKKKKVCTVAPIPGETKVWQYITLMRRIYL 377
>sp|P0CS94|NOG2_CRYNV Nucleolar GTP-binding protein 2 OS=Cryptococcus neoformans var.
grubii GN=NOG2 PE=3 SV=1
Length = 693
Score = 288 bits (738), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 148/329 (44%), Positives = 207/329 (62%), Gaps = 27/329 (8%)
Query: 30 SRSASTVRRLNMYKTRPKRDRKGKVLQHE-FQ--SKELPNTRIQPDRRWFGNTRCVNQKQ 86
++SAS V+ LN K RDR GK+++ FQ KE R++PDRRWFGNTR ++Q
Sbjct: 43 AKSASRVKMLNGGKA--VRDRDGKIVEAAAFQKGEKEAEPGRVKPDRRWFGNTRVISQSA 100
Query: 87 LEFFREELQSHMSSSYNVILREKKLPFSLLNDHQKQARVHLLDTEPFQDAFGPKGKRKRP 146
L+ FR L+ + Y+V+L+ KLP + ++ R H+++TEPF + FGPK +RKRP
Sbjct: 101 LDHFRTALKEQKADPYSVLLKRNKLPMGFGSRKNRKQRPHIVETEPFGNTFGPKAQRKRP 160
Query: 147 KLLASDYESLVKRADGSQDAFEQKNDASTSAEGVEGDGFRDLVRHTMFEKGQSKRIWGEL 206
+L + + +G+ D + + +++A R ++ KG S+RIWGEL
Sbjct: 161 RLD-------IGKGNGTADLADIYHPTTSTA------------REPIYAKGTSRRIWGEL 201
Query: 207 YKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATKGWLR 266
YKV+DSSDVV+ VLDARDP GTRC + +L++ HKH++ +LNK DLVP W T W++
Sbjct: 202 YKVLDSSDVVIHVLDARDPLGTRCKPVVEYLRKEKAHKHLVYVLNKVDLVPTWVTARWVK 261
Query: 267 VLSKEYPSLAFHASINKSFGKGSLLSVLRQFARLKSDKQAISVGFVGYPNVGKSSVINTL 326
LS P++AFHASIN SFGKGSL+ +LRQF+ L SDK+ ISVGF+GYPN GKSS+INTL
Sbjct: 262 HLSLSAPTIAFHASINNSFGKGSLIQLLRQFSVLHSDKKQISVGFIGYPNTGKSSIINTL 321
Query: 327 RTKNVILFFP---ASVVWYWFYCQLLFYF 352
+ K V P + VW + Y
Sbjct: 322 KKKKVCTVAPIPGETKVWQYITLMRRIYL 350
>sp|Q6TGJ8|NOG2_CRYGA Nucleolar GTP-binding protein 2 OS=Cryptococcus gattii GN=NOG2 PE=3
SV=1
Length = 731
Score = 287 bits (734), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 156/359 (43%), Positives = 212/359 (59%), Gaps = 50/359 (13%)
Query: 30 SRSASTVRRLNMYKTRPKRDRKGKVLQHE-FQ--SKELPNTRIQPDRRWFGNTRCVNQKQ 86
++SA+ V+ LN K RDR GK+++ FQ KE R++PDRRWFGNTR ++Q
Sbjct: 43 AKSAARVKMLNGGKA--VRDRDGKIVEAAAFQKGEKEAEPGRVKPDRRWFGNTRVISQSA 100
Query: 87 LEFFREELQSHMSSSYNVILREKKLPFSLLNDHQKQA--RVHLLDTEPFQDAFGPKGKRK 144
L+ FR L+ + Y+V+L+ KLP LL D K + R H+++TEPF D FGPK +RK
Sbjct: 101 LDHFRTALKEQKADPYSVLLKRNKLPMGLLQDDTKDSGSRPHIVETEPFGDTFGPKAQRK 160
Query: 145 RPKLLASDYESL----------------VKRADGSQDAFEQKNDASTSAEGVEGDGFRDL 188
RP+L E L +A+G+ D + + +++A
Sbjct: 161 RPRLDIGSIEELGESSAAAATAAEAATAESQANGTADLADIYHPTTSTA----------- 209
Query: 189 VRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMIL 248
R ++ KG S+RIWGELYKV+DSSDVV+ VLDARDP GTRC + +L++ HKH++
Sbjct: 210 -REPIYAKGTSRRIWGELYKVLDSSDVVIHVLDARDPLGTRCKPVVEYLRKEKAHKHLVY 268
Query: 249 LLNKCDLVPAWATKG------------WLRVLSKEYPSLAFHASINKSFGKGSLLSVLRQ 296
+LNK DLVP W T G W++ LS P++AFHASIN SFGKGSL+ +LRQ
Sbjct: 269 VLNKVDLVPTWVTSGPYAYAYANGPARWVKHLSLSAPTIAFHASINNSFGKGSLIQLLRQ 328
Query: 297 FARLKSDKQAISVGFVGYPNVGKSSVINTLRTKNVILFFP---ASVVWYWFYCQLLFYF 352
F+ L SDK+ ISVGF+GYPN GKSS+INTL+ K V P + VW + Y
Sbjct: 329 FSVLHSDKKQISVGFIGYPNTGKSSIINTLKKKKVCTVAPIPGETKVWQYITLMRRIYL 387
>sp|Q7SHR8|NOG2_NEUCR Nucleolar GTP-binding protein 2 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=nog-2 PE=3 SV=1
Length = 619
Score = 282 bits (722), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 217/360 (60%), Gaps = 28/360 (7%)
Query: 11 VSGKPKHSLDANRTDGKSGSRSASTVRRLNMYKT-RPKRDRKGKVLQH-EFQSKELPNTR 68
V+G PK G++ RSA ++ LN+ K + R+++GKV++ +QS+++P
Sbjct: 17 VTGDPK-------VKGENFYRSAKKIKALNVLKEGKAIRNKEGKVVKAASYQSRDVPTAV 69
Query: 69 IQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLNDHQKQA-RVH- 126
I+P+RRWF NTR ++Q L FRE + Y+V+L+ KLP SL+ D K A + H
Sbjct: 70 IEPNRRWFNNTRVISQDTLTSFREAIAEKDKDPYSVLLKSNKLPMSLIRDGPKDALKKHQ 129
Query: 127 ---LLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQK-------NDASTS 176
+++EPF FGPK +RKRPKL + L + ++ S D ++ + + AS
Sbjct: 130 AKMTIESEPFSQTFGPKAQRKRPKLSFNTIGDLTEHSEKSMDTYQARLEEIKLLSGASGY 189
Query: 177 AEGVEGDGFRD------LVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRC 230
G+ D ++ + +F KGQSKRIW ELYKVIDSSDV++ V+DARDP GTRC
Sbjct: 190 GGGLADDDVQEEDFSVATAKEAIFTKGQSKRIWNELYKVIDSSDVILHVIDARDPLGTRC 249
Query: 231 HHLERHLKEHCKHKHMILLLNKCDLVPAWATKGWLRVLSKEYPSLAFHASINKSFGKGSL 290
H+E++L HKH+I +LNK DLVP+ W+RVL K++P+ A +SI FG+GSL
Sbjct: 250 RHVEKYLATEAPHKHLIFVLNKIDLVPSKTAAAWIRVLQKDHPTCAMRSSIKNPFGRGSL 309
Query: 291 LSVLRQFARLKSDKQAISVGFVGYPNVGKSSVINTLRTKNVILFFP-ASVVWYWFYCQLL 349
+ +LRQF+ L D++ ISVG VGYPNVGKSS+IN LR K V P W Y L+
Sbjct: 310 IDLLRQFSILHKDRKQISVGLVGYPNVGKSSIINALRGKPVAKVAPIPGETKVWQYVTLM 369
>sp|Q54KS4|GNL3_DICDI Guanine nucleotide-binding protein-like 3 homolog OS=Dictyostelium
discoideum GN=gnl3 PE=3 SV=1
Length = 615
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 92/158 (58%), Gaps = 26/158 (16%)
Query: 200 KRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAW 259
K+ + E+ KVI++ DV++QVLDARDP G RC +E+ + E +K ++L+LNK DLVP
Sbjct: 132 KQFYREVKKVIEAGDVILQVLDARDPMGCRCLEIEKMILERYTNKKIVLILNKIDLVPRE 191
Query: 260 ATKGWLRVLSKEYPSLAFHASINK-------------------------SFGKGSLLSVL 294
WL+ L YP+LAF S + S G LL +L
Sbjct: 192 NVLMWLKYLRNFYPTLAFKCSTQQQKRNLGQQGGIQPELASNDMLNSTESLGAEQLLQLL 251
Query: 295 RQFARLKSDKQAISVGFVGYPNVGKSSVINTL-RTKNV 331
+ ++R + K +++VG +GYPNVGKSS+IN+L RT++V
Sbjct: 252 KNYSRSLNIKTSVTVGIIGYPNVGKSSLINSLKRTRSV 289
>sp|Q21086|GNL3_CAEEL Guanine nucleotide-binding protein-like 3 homolog OS=Caenorhabditis
elegans GN=nst-1 PE=3 SV=1
Length = 556
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 105/204 (51%), Gaps = 33/204 (16%)
Query: 144 KRPKLLASDYESLVKRADGSQDAFEQKNDASTSAEGVEGDGFRDLVRHTMFEKGQSKRIW 203
KR L +++ES+V +A F++K A E + F L T+ K
Sbjct: 90 KRKNNLPANFESMVAKASKQGTEFDKK-----VASAAEHEKFNTLDDKTI------KAYA 138
Query: 204 GELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATKG 263
E+ K ++ +DV++QVLDARDP G+R +E + + K ++LLLNK DLVP +
Sbjct: 139 SEVRKTVEIADVIIQVLDARDPLGSRSKSVEDQVLKG--GKRLVLLLNKIDLVPRENVQK 196
Query: 264 WLRVLSKEYPSLAFHASI--------------------NKSFGKGSLLSVLRQFARLKSD 303
WL L ++P++AF AS +K G ++ +L + R K
Sbjct: 197 WLEYLRGQFPTIAFKASTQEQKSNIGRFNSAILNNTETSKCVGADIVMKILANYCRNKDI 256
Query: 304 KQAISVGFVGYPNVGKSSVINTLR 327
K +I VG VG+PNVGKSSVIN+L+
Sbjct: 257 KTSIRVGVVGFPNVGKSSVINSLK 280
>sp|Q6DRP2|GNL3_DANRE Guanine nucleotide-binding protein-like 3 OS=Danio rerio GN=gnl3
PE=2 SV=1
Length = 561
Score = 108 bits (269), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 78/148 (52%), Gaps = 25/148 (16%)
Query: 205 ELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATKGW 264
EL KVI++SDV+V+VLDARDP G RC LE + +H K ++ +LNK DLVP + W
Sbjct: 135 ELNKVIEASDVIVEVLDARDPLGCRCPQLEEMVLKHEGKKKLLFILNKIDLVPKDNLEKW 194
Query: 265 LRVLSKEYPSLAFHASIN-------------------------KSFGKGSLLSVLRQFAR 299
L L E P+ F +S+ FGK LL L A
Sbjct: 195 LHFLEAECPTFLFKSSMQLKDRTVQQKRQQRGTNAVLDHSRAASCFGKDFLLQTLNDLAN 254
Query: 300 LKSDKQAISVGFVGYPNVGKSSVINTLR 327
K + + VG VG+PNVGKSS+IN+L+
Sbjct: 255 KKEGETMLKVGVVGFPNVGKSSIINSLK 282
>sp|Q8MT06|GNL3_DROME Guanine nucleotide-binding protein-like 3 homolog OS=Drosophila
melanogaster GN=ns1 PE=1 SV=2
Length = 581
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 82/150 (54%), Gaps = 23/150 (15%)
Query: 200 KRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAW 259
K+ + E KVI+++DVV++V+DARDP GTRC+ +ER ++ +K ++L+LNK DLVP
Sbjct: 138 KQYFKEFRKVIENADVVLEVVDARDPLGTRCNEVERAVRGAPGNKRLVLVLNKADLVPRE 197
Query: 260 ATKGWLRVLSKEYPSLAFHASINKS-----------------------FGKGSLLSVLRQ 296
W++ + P AF AS G L+S+L
Sbjct: 198 NLNNWIKYFRRSGPVTAFKASTQDQANRLGRRKLREMKTEKAMQGSVCIGAELLMSMLGN 257
Query: 297 FARLKSDKQAISVGFVGYPNVGKSSVINTL 326
+ R K K +I VG VG PNVGKSS+IN+L
Sbjct: 258 YCRNKGIKTSIRVGVVGIPNVGKSSIINSL 287
>sp|Q3T0J9|GNL3L_BOVIN Guanine nucleotide-binding protein-like 3-like protein OS=Bos
taurus GN=GNL3L PE=2 SV=1
Length = 575
Score = 105 bits (261), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 86/157 (54%), Gaps = 24/157 (15%)
Query: 195 EKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCD 254
++ K + E +KV++ SDV+++VLD+RDP G RC +E + +K ++L+LNK D
Sbjct: 110 DEATRKAYYKEFHKVVEYSDVILEVLDSRDPLGCRCFQMEETVLRAEGNKKLVLVLNKID 169
Query: 255 LVPAWATKGWLRVLSKEYPSLAFHAS-------INK-----------------SFGKGSL 290
LVP + WL L E P++AF AS +N+ FG +L
Sbjct: 170 LVPKEVVEKWLEYLRNELPTVAFKASTQHQVKNLNRCSVPVDQASESLLKSKACFGAENL 229
Query: 291 LSVLRQFARLKSDKQAISVGFVGYPNVGKSSVINTLR 327
+ VL + RL + I VG VG PNVGKSS+IN+L+
Sbjct: 230 MRVLGNYCRLGEVRTHIRVGVVGLPNVGKSSLINSLK 266
>sp|Q9BVP2|GNL3_HUMAN Guanine nucleotide-binding protein-like 3 OS=Homo sapiens GN=GNL3
PE=1 SV=2
Length = 549
Score = 104 bits (260), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 90/160 (56%), Gaps = 27/160 (16%)
Query: 196 KGQSKRIWG-ELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCD 254
K SK+++ EL KVI++SDVV++VLDARDP G RC +E + + K ++L+LNK D
Sbjct: 123 KQNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQS-GQKKLVLILNKSD 181
Query: 255 LVPAWATKGWLRVLSKEYPSLAFHAS--------INK---------------SFGKGSLL 291
LVP + WL L KE P++ F AS I K FGK L
Sbjct: 182 LVPKENLESWLNYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLW 241
Query: 292 SVLRQFARLKSDKQAISVGFVGYPNVGKSSVINTLRTKNV 331
+L F S +AI VG +G+PNVGKSS+IN+L+ + +
Sbjct: 242 KLLGGFQETCS--KAIRVGVIGFPNVGKSSIINSLKQEQM 279
>sp|Q6PGG6|GNL3L_MOUSE Guanine nucleotide-binding protein-like 3-like protein OS=Mus
musculus GN=Gnl3l PE=1 SV=1
Length = 577
Score = 104 bits (260), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 103/215 (47%), Gaps = 47/215 (21%)
Query: 142 KRKRPKLLASDYESLVKRADGSQDAFEQKNDASTSAEGVEGDGFRDLVRHTMF----EKG 197
+R+R + + S + ++KR Q FEQK + L MF ++
Sbjct: 71 ERQRHRTMESYCQDVLKR----QQEFEQKEEV--------------LQELNMFPQLDDEA 112
Query: 198 QSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVP 257
K + E KV++ SDV+++VLDARDP G RC +E + +K ++L+LNK DLVP
Sbjct: 113 TRKAYYKEFRKVVEYSDVILEVLDARDPLGCRCFQMEETVLRAEGNKKLVLVLNKIDLVP 172
Query: 258 AWATKGWLRVLSKEYPSLAFHASIN-------------------------KSFGKGSLLS 292
+ WL L E P++AF AS FG +L+
Sbjct: 173 KEIVEKWLEYLLNELPTVAFKASTQHHQVKNLTRCKVPVDQASESLLKSRACFGAENLMR 232
Query: 293 VLRQFARLKSDKQAISVGFVGYPNVGKSSVINTLR 327
VL + RL + I VG VG PNVGKSS+IN+L+
Sbjct: 233 VLGNYCRLGEVRGHIRVGVVGLPNVGKSSLINSLK 267
>sp|Q9NVN8|GNL3L_HUMAN Guanine nucleotide-binding protein-like 3-like protein OS=Homo
sapiens GN=GNL3L PE=1 SV=1
Length = 582
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 85/157 (54%), Gaps = 24/157 (15%)
Query: 195 EKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCD 254
++ K + E KV++ SDV+++VLDARDP G RC +E + +K ++L+LNK D
Sbjct: 117 DEATRKAYYKEFRKVVEYSDVILEVLDARDPLGCRCFQMEEAVLRAQGNKKLVLVLNKID 176
Query: 255 LVPAWATKGWLRVLSKEYPSLAFHAS-------INK-----------------SFGKGSL 290
LVP + WL L E P++AF AS +N+ FG +L
Sbjct: 177 LVPKEVVEKWLDYLRNELPTVAFKASTQHQVKNLNRCSVPVDQASESLLKSKACFGAENL 236
Query: 291 LSVLRQFARLKSDKQAISVGFVGYPNVGKSSVINTLR 327
+ VL + RL + I VG VG PNVGKSS+IN+L+
Sbjct: 237 MRVLGNYCRLGEVRTHIRVGVVGLPNVGKSSLINSLK 273
>sp|O74791|GRN1_SCHPO GTPase grn1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=grn1 PE=1 SV=1
Length = 470
Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 78/135 (57%), Gaps = 13/135 (9%)
Query: 205 ELYKVIDSSDVVVQVLDARDPQGTRCHHLERH-LKEHCKHKHMILLLNKCDLVPAWATKG 263
E KV+++SDV++ VLDARDP+GTR +ER L + K +I ++NK DLVP+
Sbjct: 155 EFKKVVEASDVILYVLDARDPEGTRSKDVERQVLASSAEEKRLIFVINKIDLVPSEVLNK 214
Query: 264 WLRVLSKEYPSLAF------------HASINKSFGKGSLLSVLRQFARLKSDKQAISVGF 311
W+ L +P++ H S + S +LL L+ ++ K K +++VG
Sbjct: 215 WVTYLRNFFPTIPMRSASGSGNSNLKHQSASASSTISNLLKSLKSYSAKKKLKSSLTVGV 274
Query: 312 VGYPNVGKSSVINTL 326
+GYPNVGKSSVIN L
Sbjct: 275 IGYPNVGKSSVINAL 289
>sp|Q8CI11|GNL3_MOUSE Guanine nucleotide-binding protein-like 3 OS=Mus musculus GN=Gnl3
PE=1 SV=2
Length = 538
Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 82/143 (57%), Gaps = 23/143 (16%)
Query: 205 ELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATKGW 264
EL KVI++SD+V++VLDARDP G RC +E + + K +IL+LNK DLVP + W
Sbjct: 131 ELKKVIEASDIVLEVLDARDPLGCRCPQIEEAVIQS-GSKKLILVLNKSDLVPKENLENW 189
Query: 265 LRVLSKEYPSLAFHASIN--------------------KSFGKGSLLSVLRQFARLKSDK 304
L L+KE P++ F AS N GK +L +L F + S
Sbjct: 190 LNYLNKELPTVVFKASTNLKNRKTFKIKKKKVVPFQSKICCGKEALWKLLGDFQQ--SCG 247
Query: 305 QAISVGFVGYPNVGKSSVINTLR 327
+ I VG +G+PNVGKSSVIN+L+
Sbjct: 248 KDIQVGVIGFPNVGKSSVINSLK 270
>sp|P40010|NUG1_YEAST Nuclear GTP-binding protein NUG1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NUG1 PE=1 SV=1
Length = 520
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 87/142 (61%), Gaps = 14/142 (9%)
Query: 198 QSKRIWGELYK-VIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLV 256
+S++ + +++K VID+SDV++ VLDARDP+ TR +E + + + K +IL+LNK DL+
Sbjct: 160 KSRKAYDKIFKSVIDASDVILYVLDARDPESTRSRKVEEAVLQ-SQGKRLILILNKVDLI 218
Query: 257 PAWATKGWLRVLSKEYPSLAFHAS------------INKSFGKGSLLSVLRQFARLKSDK 304
P + WL L +P++ AS ++++ +LL L+ ++ + K
Sbjct: 219 PPHVLEQWLNYLKSSFPTIPLRASSGAVNGTSFNRKLSQTTTASALLESLKTYSNNSNLK 278
Query: 305 QAISVGFVGYPNVGKSSVINTL 326
++I VG +GYPNVGKSSVIN L
Sbjct: 279 RSIVVGVIGYPNVGKSSVINAL 300
>sp|Q6P4W5|GNL3_XENTR Guanine nucleotide-binding protein-like 3 OS=Xenopus tropicalis
GN=gnl3 PE=2 SV=2
Length = 548
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 83/153 (54%), Gaps = 25/153 (16%)
Query: 206 LYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATKGWL 265
+ KV++ SDVV++VLDARDP G+RC E + + +K ++LLLNK DLVP + WL
Sbjct: 128 VNKVLEQSDVVLEVLDARDPLGSRCAQAEEAVLKS-PNKRLLLLLNKADLVPRDVLEKWL 186
Query: 266 RVLSKEYPSLAFH----------------------ASINKSFGKGSLLSVLRQFARLKSD 303
+VL+ E P++ F + N+ G LL +L +SD
Sbjct: 187 QVLTAELPTVPFRCLPQAPSKSPGKKHKVPNTADLCTENRCPGGQVLLRILHSLCPSQSD 246
Query: 304 KQAISVGFVGYPNVGKSSVINTLRTKNVILFFP 336
AI VG +G+ NVGKSSVIN+L+ +V P
Sbjct: 247 --AIKVGVIGFANVGKSSVINSLKQSHVCNVGP 277
>sp|Q811S9|GNL3_RAT Guanine nucleotide-binding protein-like 3 OS=Rattus norvegicus
GN=Gnl3 PE=1 SV=1
Length = 538
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 85/148 (57%), Gaps = 25/148 (16%)
Query: 205 ELYKVIDSSDVVVQVLDARDPQGTRCHHLERH-LKEHCKHKHMILLLNKCDLVPAWATKG 263
EL KVI++SD+V++VLDARDP G RC +E ++ C K ++L+LNK DLVP +
Sbjct: 131 ELKKVIEASDIVLEVLDARDPLGCRCPQVEEAVIQSGC--KKLVLVLNKSDLVPKENLEN 188
Query: 264 WLRVLSKEYPSLAFHASIN--------------------KSFGKGSLLSVLRQFARLKSD 303
WL L+KE P++ F AS N GK +L +L F + S
Sbjct: 189 WLTYLNKELPTVVFKASTNLKNRKKTFKIKKKVVPFQSKLCCGKEALWKLLGGFQQ--SC 246
Query: 304 KQAISVGFVGYPNVGKSSVINTLRTKNV 331
+ + VG VG+PNVGKSS+IN+L+ + +
Sbjct: 247 GKGVQVGVVGFPNVGKSSIINSLKQERI 274
>sp|Q7ZX41|GNL3_XENLA Guanine nucleotide-binding protein-like 3 OS=Xenopus laevis GN=gnl3
PE=2 SV=1
Length = 542
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 84/156 (53%), Gaps = 26/156 (16%)
Query: 205 ELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATKGW 264
++ KV++ SDV+V+VLDARDP G+RC E + + +K ++LLLNK DLVP + W
Sbjct: 126 QVNKVLEQSDVIVEVLDARDPLGSRCSQAEEVVLKS-PNKRLLLLLNKSDLVPREMVEKW 184
Query: 265 LRVLSKEYPSLAFH--ASIN---------------------KSFGKGSLLSVLRQFARLK 301
L+VLS E P++ F A I K G LL +L
Sbjct: 185 LQVLSAELPTVPFRCVAQIQDKSEKKKKKKVPVSADLVTDPKCPGGQVLLKILHSLC--P 242
Query: 302 SDKQAISVGFVGYPNVGKSSVINTLRTKNVILFFPA 337
S +AI VG +G+ NVGKSSVIN+L+ +V P+
Sbjct: 243 SHNEAIKVGVIGFANVGKSSVINSLKQSHVCNVGPS 278
>sp|Q58859|Y1464_METJA Uncharacterized GTP-binding protein MJ1464 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1464 PE=3 SV=1
Length = 373
Score = 78.6 bits (192), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 10/142 (7%)
Query: 188 LVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMI 247
+VR ++K K+I + K+ID DV++ VLDARDP+ TR LE+ K K +I
Sbjct: 2 MVRVMRYKKVPVKKI---VNKIIDECDVILLVLDARDPEMTRNRELEKK--IKAKGKKLI 56
Query: 248 LLLNKCDLVPAWATKGWLRVLSKEYPSLAFHASINKSFGKGSLLSVLRQFARLKSDKQAI 307
+LNK DLVP + W V + S + G L +++Q + K+
Sbjct: 57 YVLNKADLVPKDILEKWKEVFGEN----TVFVSAKRRLGTKILREMIKQSLKEMGKKEG- 111
Query: 308 SVGFVGYPNVGKSSVINTLRTK 329
VG VGYPNVGKSS+IN L K
Sbjct: 112 KVGIVGYPNVGKSSIINALTGK 133
>sp|Q10190|LSG1_SCHPO Large subunit GTPase 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=lsg1 PE=3 SV=1
Length = 616
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 80/172 (46%), Gaps = 39/172 (22%)
Query: 192 TMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLN 251
T FE+ + IW +L++VI+ SDVVVQ++DAR+P R HLE+++KE K LL+N
Sbjct: 152 TPFER--NLEIWRQLWRVIERSDVVVQIVDARNPLFFRSAHLEQYVKEVGPSKKNFLLVN 209
Query: 252 KCDLVPAWATKGWLRVLSK-EYPSLAFHASIN----------KSFGKGS----------- 289
K D++ W ++ P L F A + +++ S
Sbjct: 210 KADMLTEEQRNYWSSYFNENNIPFLFFSARMAAEANERGEDLETYESTSSNEIPESLQAD 269
Query: 290 --------------LLSVLRQFARLKSD-KQAISVGFVGYPNVGKSSVINTL 326
L + +FA D K ++ G VGYPNVGKSS IN L
Sbjct: 270 ENDVHSSRIATLKVLEGIFEKFASTLPDGKTKMTFGLVGYPNVGKSSTINAL 321
>sp|P53145|LSG1_YEAST Large subunit GTPase 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=LSG1 PE=1 SV=1
Length = 640
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 47/180 (26%)
Query: 192 TMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLN 251
T FE+ + +W +L++V++ SD+VVQ++DAR+P R LER++KE K +LL+N
Sbjct: 179 TPFER--NIEVWKQLWRVVERSDLVVQIVDARNPLLFRSVDLERYVKESDDRKANLLLVN 236
Query: 252 KCDLVPAWATKGWLRVLSKEYPSLAFHASI------------------------------ 281
K DL+ W + + S F++++
Sbjct: 237 KADLLTKKQRIAWAKYFISKNISFTFYSALRANQLLEKQKEMGEDYREQDFEEADKEGFD 296
Query: 282 --NKSFGKGSLLSV--LRQFARLKS-----------DKQAISVGFVGYPNVGKSSVINTL 326
K K +LS+ L + K+ I++G VGYPNVGKSS IN+L
Sbjct: 297 ADEKVMEKVKILSIDQLEELFLSKAPNEPLLPPLPGQPPLINIGLVGYPNVGKSSTINSL 356
>sp|Q6NY89|LSG1_DANRE Large subunit GTPase 1 homolog OS=Danio rerio GN=lsg1 PE=2 SV=1
Length = 640
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 68/128 (53%), Gaps = 17/128 (13%)
Query: 172 DASTSAE---GVEGDGF----RDLVRH--------TMFEKGQSKRIWGELYKVIDSSDVV 216
D STS E E D F RDL R T FE+ W +L++VI+ SDVV
Sbjct: 121 DESTSPEVLQQTEKDSFLTWRRDLARLEEEQKLILTPFERNLD--FWRQLWRVIERSDVV 178
Query: 217 VQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATKGWLRVLSKEYPSLA 276
VQ++DAR+P RC LE+++KE HK +LLLNK DL+ + W R KE
Sbjct: 179 VQIVDARNPLLFRCPDLEKYVKEVSVHKVNMLLLNKADLLTREQRRAWARYFQKEGIRAV 238
Query: 277 FHASINKS 284
F +++ ++
Sbjct: 239 FWSALAEA 246
Score = 40.4 bits (93), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Query: 307 ISVGFVGYPNVGKSSVINTL-RTKNV 331
I+VG VGYPNVGKSS INT+ R K V
Sbjct: 369 ITVGLVGYPNVGKSSTINTIFRNKKV 394
>sp|Q65JP4|RBGA_BACLD Ribosome biogenesis GTPase A OS=Bacillus licheniformis (strain DSM
13 / ATCC 14580) GN=rbgA PE=3 SV=1
Length = 283
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 15/127 (11%)
Query: 214 DVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATKGWLRVLSKE-Y 272
D+V +++DAR P +R +E LK +K I+LLNK D + TK W + K+
Sbjct: 25 DIVYELVDARIPMSSRNPMIEDILK----NKPRIMLLNKADKADSSVTKAWKQHFEKDGI 80
Query: 273 PSLAFHASINKSFGKGSLLSVLRQFARLKSDK--------QAISVGFVGYPNVGKSSVIN 324
P+LA + S+N G +L ++ + K DK +AI VG PNVGKS++IN
Sbjct: 81 PTLAIN-SVNGQ-GLNQILPASKELLKEKFDKMKAKGVKPRAIRALIVGIPNVGKSTLIN 138
Query: 325 TLRTKNV 331
L KN+
Sbjct: 139 RLAKKNI 145
>sp|Q9H089|LSG1_HUMAN Large subunit GTPase 1 homolog OS=Homo sapiens GN=LSG1 PE=1 SV=2
Length = 658
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%)
Query: 203 WGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATK 262
W +L++VI+ SD+VVQ++DAR+P RC LE ++KE +K ++L+NK DL+ A
Sbjct: 164 WRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEMDANKENVILINKADLLTAEQRS 223
Query: 263 GWLRVLSKEYPSLAFHASI 281
W KE + F +++
Sbjct: 224 AWAMYFEKEDVKVIFWSAL 242
Score = 39.3 bits (90), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 287 KGSLLSVLRQF--ARLKSDKQAISVGFVGYPNVGKSSVINTL 326
K LL + ++ R D Q ++VG VGYPNVGKSS INT+
Sbjct: 366 KQELLELFKELHTGRKVKDGQ-LTVGLVGYPNVGKSSTINTI 406
>sp|Q5ZJD3|LSG1_CHICK Large subunit GTPase 1 homolog OS=Gallus gallus GN=LSG1 PE=2 SV=1
Length = 653
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 192 TMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLN 251
T FE+ + W +L++VI+ SD+VVQ++DAR+P RC LE ++KE K ++L+N
Sbjct: 146 TPFER--NLEFWRQLWRVIERSDIVVQIVDARNPLLFRCQDLESYVKEVSNDKENMILIN 203
Query: 252 KCDLVPAWATKGWLRVLSKEYPSLAFHASI 281
K DL+ W + KE + F +++
Sbjct: 204 KADLLSEEQRAAWAQFFEKEGVKVVFWSAL 233
Score = 38.9 bits (89), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 15/20 (75%), Positives = 18/20 (90%)
Query: 307 ISVGFVGYPNVGKSSVINTL 326
++VG VGYPNVGKSS INT+
Sbjct: 382 VNVGLVGYPNVGKSSTINTI 401
>sp|Q4R8L2|LSG1_MACFA Large subunit GTPase 1 homolog OS=Macaca fascicularis GN=LSG1 PE=2
SV=1
Length = 653
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 170 KNDASTSAEGVEGDGF----RDLVRH--------TMFEKGQSKRIWGELYKVIDSSDVVV 217
KN + E D F R LVR T FE+ W +L++VI+ SD+VV
Sbjct: 121 KNTTPEELKQAEKDNFLEWRRQLVRLEEEQKLILTSFERNLD--FWRQLWRVIERSDIVV 178
Query: 218 QVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATKGWLRVLSKEYPSLAF 277
Q++DAR+P RC LE ++KE K ++L+NK DL+ A W KE + F
Sbjct: 179 QIVDARNPLLFRCEDLECYVKEIDASKENVILINKADLLTAEQRSAWATYFEKEDVKVIF 238
Query: 278 HASI 281
+++
Sbjct: 239 WSAL 242
Score = 33.1 bits (74), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 287 KGSLLSVLRQFA---RLKSDKQAISVGFVGYPNVGKSSVINTL 326
K LL + ++ ++K + I G+ GYPNVGKSS INT+
Sbjct: 366 KQELLELFKELHTGRKVKDGQLTIGTGW-GYPNVGKSSTINTI 407
>sp|Q2YDM7|LSG1_BOVIN Large subunit GTPase 1 homolog OS=Bos taurus GN=LSG1 PE=2 SV=1
Length = 652
Score = 61.6 bits (148), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 203 WGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATK 262
W +L++VI+ SD+VVQ++DAR+P RC LE ++K +K ++L+NK DL+ A
Sbjct: 164 WRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKTIDDNKENVILINKADLLTAEQRS 223
Query: 263 GWLRVLSKEYPSLAFHASINKSF 285
W KE + F +++ ++
Sbjct: 224 AWAEFFKKENVKVIFWSALAEAI 246
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 287 KGSLLSVLRQFARLKSDKQA-ISVGFVGYPNVGKSSVINTL 326
K LL V +Q K K ++VG VGYPNVGKSS INT+
Sbjct: 360 KQELLEVFKQLHSGKKVKDGQLTVGLVGYPNVGKSSTINTI 400
>sp|Q5BJT6|LSG1_RAT Large subunit GTPase 1 homolog OS=Rattus norvegicus GN=Lsg1 PE=2
SV=1
Length = 655
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 203 WGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATK 262
W +L++VI+ SD+VVQ++DAR+P RC LE ++KE K ++L+NK DL+ A
Sbjct: 164 WRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEIDAAKENVILINKADLLTAEQRV 223
Query: 263 GWLRVLSKEYPSLAFHASINKSF 285
W KE + F +++ ++
Sbjct: 224 AWAVHFEKEGVKVIFWSALAETV 246
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 4/38 (10%)
Query: 293 VLRQFARLKSDKQA----ISVGFVGYPNVGKSSVINTL 326
+L F +L + K+ ++VG VGYPNVGKSS INT+
Sbjct: 366 LLELFKKLHTGKKVKDGQLTVGLVGYPNVGKSSTINTI 403
>sp|Q3UM18|LSG1_MOUSE Large subunit GTPase 1 homolog OS=Mus musculus GN=Lsg1 PE=2 SV=2
Length = 644
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 50/82 (60%)
Query: 203 WGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATK 262
W +L++VI+ SD+VVQ++DAR+P RC LE ++KE K ++L+NK DL+ A
Sbjct: 164 WRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEIDAAKENVILINKADLLTAEQRF 223
Query: 263 GWLRVLSKEYPSLAFHASINKS 284
W KE + F +++ ++
Sbjct: 224 AWAVHFEKEGVKVIFWSALAET 245
Score = 39.7 bits (91), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 4/38 (10%)
Query: 293 VLRQFARLKSDKQA----ISVGFVGYPNVGKSSVINTL 326
+L F +L + K+ ++VG VGYPNVGKSS INT+
Sbjct: 355 LLELFKKLHTGKKVKDGQLTVGLVGYPNVGKSSTINTI 392
>sp|Q819W8|RBGA_BACCR Ribosome biogenesis GTPase A OS=Bacillus cereus (strain ATCC 14579
/ DSM 31) GN=rbgA PE=3 SV=1
Length = 296
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 17/128 (13%)
Query: 214 DVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATKGWLRVLSKEYP 273
DVV++++DAR P +R ++ E HK +++LNK D+ TK W+ KE
Sbjct: 25 DVVIELVDARLPLSSRNPMID----EIITHKPRLVVLNKADMADDRLTKQWIAYF-KEKG 79
Query: 274 SLAFHASINKSFGKG--SLLSVLRQFARLKSDK--------QAISVGFVGYPNVGKSSVI 323
+A SIN G+G + + + + K DK +AI VG PNVGKS++I
Sbjct: 80 HMAI--SINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIRALIVGIPNVGKSTLI 137
Query: 324 NTLRTKNV 331
N L KN+
Sbjct: 138 NKLAKKNI 145
>sp|O74776|MTG1_SCHPO Mitochondrial GTPase 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=mtg1 PE=3 SV=1
Length = 328
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 26/152 (17%)
Query: 197 GQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLV 256
G + L + S+D+ V+V DAR P +R + +E L + K+ I++ NKCDL
Sbjct: 20 GHMNKTLKRLKNLTSSNDIFVEVRDARIPLTSRNYVMEDFLNK----KNRIIVYNKCDLA 75
Query: 257 PAWATKG-------------------WLRVLSKEYPSLAFHASINKS--FGKGSLLSVLR 295
+ TK W + S S ++K+ F K LL ++R
Sbjct: 76 DTFHTKAKVSKHRIQNLAQQFQNVECWFKETSTPEKSAFITPYVSKAPYFAK-ELLRLIR 134
Query: 296 QFARLKSDKQAISVGFVGYPNVGKSSVINTLR 327
S + V FVG PN GKSS++N+LR
Sbjct: 135 TLVDQASANGRVYVYFVGMPNTGKSSILNSLR 166
>sp|Q9W590|LSG1_DROME Large subunit GTPase 1 homolog OS=Drosophila melanogaster GN=ns3
PE=1 SV=1
Length = 606
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 203 WGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATK 262
W +L++V++ SDVVVQ++DAR+P R LER++KE K ++L+NK DL+ +
Sbjct: 165 WRQLWRVVERSDVVVQIVDARNPLLFRSADLERYVKEVEPSKMNMILVNKSDLLTEEQRR 224
Query: 263 GWLRVLSKEYPSLAFHAS 280
W E AF+++
Sbjct: 225 HWAEYFDSEGIRTAFYSA 242
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 271 EYPSLAFHASINKSFGKGSLLSVLRQ-FARLKSDKQAISVGFVGYPNVGKSSVINTLRT 328
E P L + + + L+ LR + + +Q ++VG VGYPNVGKSS IN+L T
Sbjct: 301 ELPRLPGDKNSPRLLSRLELIEFLRNIYTGPRHTEQHVTVGMVGYPNVGKSSTINSLMT 359
>sp|D5DJL5|RBGA_BACMD Ribosome biogenesis GTPase A OS=Bacillus megaterium (strain DSM
319) GN=rbgA PE=3 SV=1
Length = 288
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 18/129 (13%)
Query: 214 DVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATKGWLRVLSKEYP 273
D+V +++DAR PQ +R ++ E +K I+LLNK D T+ WL ++
Sbjct: 25 DIVYELVDARIPQSSRNPMID----EIIVNKPRIVLLNKVDKADPRVTQQWLDYYKEQG- 79
Query: 274 SLAFHASINKSFGKG--SLLSVLRQFARLKSDK---------QAISVGFVGYPNVGKSSV 322
+ +I+ GKG ++S ++ + K D+ +AI VG PNVGKS++
Sbjct: 80 --IYALAIDAQAGKGMKQIVSSSKELLQEKFDRMRAKGVKKPRAIRAMIVGIPNVGKSTL 137
Query: 323 INTLRTKNV 331
IN L +K +
Sbjct: 138 INRLASKKI 146
>sp|E0TTS5|RBGA_BACPZ Ribosome biogenesis GTPase A OS=Bacillus subtilis subsp. spizizenii
(strain ATCC 23059 / NRRL B-14472 / W23) GN=rbgA PE=3
SV=1
Length = 282
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 19/129 (14%)
Query: 214 DVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATKGWLRVLSKEYP 273
D+V +++DAR P +R +E LK +K I+LLNK D A T+ W + +
Sbjct: 25 DIVYELVDARIPMSSRNPMIEDILK----NKPRIMLLNKADKADAAVTQQW----KEHFE 76
Query: 274 SLAFHA-SINKSFGKG--SLLSVLRQFARLKSDK--------QAISVGFVGYPNVGKSSV 322
+ + SIN G+G ++ ++ + K D+ +AI +G PNVGKS++
Sbjct: 77 NQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIRALIIGIPNVGKSTL 136
Query: 323 INTLRTKNV 331
IN L KN+
Sbjct: 137 INRLAKKNI 145
>sp|O31743|RBGA_BACSU Ribosome biogenesis GTPase A OS=Bacillus subtilis (strain 168)
GN=rbgA PE=1 SV=1
Length = 282
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 19/129 (14%)
Query: 214 DVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATKGWLRVLSKEYP 273
D+V +++DAR P +R +E LK +K I+LLNK D A T+ W + +
Sbjct: 25 DIVYELVDARIPMSSRNPMIEDILK----NKPRIMLLNKADKADAAVTQQW----KEHFE 76
Query: 274 SLAFHA-SINKSFGKG--SLLSVLRQFARLKSDK--------QAISVGFVGYPNVGKSSV 322
+ + SIN G+G ++ ++ + K D+ +AI +G PNVGKS++
Sbjct: 77 NQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIRALIIGIPNVGKSTL 136
Query: 323 INTLRTKNV 331
IN L KN+
Sbjct: 137 INRLAKKNI 145
>sp|A8FD69|RBGA_BACP2 Ribosome biogenesis GTPase A OS=Bacillus pumilus (strain SAFR-032)
GN=rbgA PE=3 SV=1
Length = 282
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 19/129 (14%)
Query: 214 DVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATKGWLRVLSKE-Y 272
D+V ++ DAR P +R +E E ++K I+LLNK D TK W ++
Sbjct: 25 DIVFELTDARIPMSSRNPMIE----EILQNKPKIMLLNKADKADPRVTKEWQAHFEQQGV 80
Query: 273 PSLAFHASINKSFGKG--SLLSVLRQFARLKSDK--------QAISVGFVGYPNVGKSSV 322
SLA IN G+G +++ ++ + K D+ +AI +G PNVGKS++
Sbjct: 81 RSLA----INSVDGQGLNQIITTSKEILKEKFDRMKAKGVKPRAIRALIIGIPNVGKSTL 136
Query: 323 INTLRTKNV 331
IN L KN+
Sbjct: 137 INRLAKKNI 145
>sp|Q2SDW8|DER_HAHCH GTPase Der OS=Hahella chejuensis (strain KCTC 2396) GN=der PE=3
SV=1
Length = 472
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 71/143 (49%), Gaps = 4/143 (2%)
Query: 195 EKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCD 254
E+G + G+ + ++ +DVV+ V+DA+ + + L+ + K IL++NK D
Sbjct: 64 EQGIDAAMAGQSFTAMNEADVVLFVVDAQAGVTPADEMIAKELR--VRGKPTILVVNKID 121
Query: 255 -LVPAWATKGWLRVLSKEYP-SLAFHASINKSFGKGSLLSVLRQFARLKSDKQAISVGFV 312
+ P A + + +EY + A H +S + +L Q D I +G +
Sbjct: 122 GMQPEVAAADFFAMGFQEYMYTAAAHNRGVRSLLEKALEPFPEQEPLEGEDDSGIRIGII 181
Query: 313 GYPNVGKSSVINTLRTKNVILFF 335
G PNVGKS+++N L ++ ++ F
Sbjct: 182 GRPNVGKSTLVNRLLGEDRVVVF 204
>sp|B3PDM5|DER_CELJU GTPase Der OS=Cellvibrio japonicus (strain Ueda107) GN=der PE=3
SV=1
Length = 466
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 149 LASDYESLVKRADGSQDAFEQKNDASTSAEGVEGDGFRDLVRHTMFEKGQSKRIWGELYK 208
L +DY L + + E + G+ G+ E+G + G+
Sbjct: 29 LVADYPGLTRDRKYGEARLENRRFIVIDTGGISGE-----------EEGIDSAMAGQSLL 77
Query: 209 VIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCD-LVPAWATKGWLRV 267
I +D+V+ ++D+R + RHL+ H K +++ NK D + P A + +
Sbjct: 78 AIQEADIVLFIVDSRVGLNPADELIARHLRVHNKKTYVVA--NKIDGMDPDIALAPFYEL 135
Query: 268 -LSKEYPSLAFHASINKSFGKGSLLSVLRQFARLKSDKQ-----AISVGFVGYPNVGKSS 321
+ + +P+ A H +S + VL ++ + ++Q I + VG PNVGKS+
Sbjct: 136 GMGEVHPTTATHGRGVRSL----MEDVLAEYPEIPEEEQQGEATGIKIAIVGRPNVGKST 191
Query: 322 VINTLRTKNVILFF 335
++N L ++ ++ +
Sbjct: 192 LVNRLLGEDRVVVY 205
>sp|B7GGD6|RBGA_ANOFW Ribosome biogenesis GTPase A OS=Anoxybacillus flavithermus (strain
DSM 21510 / WK1) GN=rbgA PE=3 SV=1
Length = 284
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 21/146 (14%)
Query: 197 GQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLV 256
++KR E K+ID +V +++DAR P +R ++ E +K I+LLNK D+
Sbjct: 14 AKAKREVTEKLKLID---IVFELVDARIPMSSRNPLID----EIVANKPRIILLNKADMA 66
Query: 257 PAWATKGWLRVLSKEYPSLAFHASINKSFGKG--SLLSVLRQFARLKSDK---------Q 305
TK W+ + + +I+ G G +++V ++ R K +K +
Sbjct: 67 DPDVTKQWVDFFAAQQID---AIAIDSQSGTGVKQMVAVAKEKLRSKFEKMMAKGMKRPR 123
Query: 306 AISVGFVGYPNVGKSSVINTLRTKNV 331
A+ VG PNVGKS++IN L K++
Sbjct: 124 AMRALIVGIPNVGKSTLINRLAGKHI 149
>sp|C5D8U8|RBGA_GEOSW Ribosome biogenesis GTPase A OS=Geobacillus sp. (strain WCH70)
GN=rbgA PE=3 SV=1
Length = 283
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 23/147 (15%)
Query: 197 GQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLV 256
++KR E K+ID +V ++LDAR P +R + E +K I+LLNK D+
Sbjct: 13 AKAKREVQEKLKLID---IVFELLDARIPLSSRNPMIH----EILGNKPRIVLLNKADMA 65
Query: 257 PAWATKGWLRVLSKEYPSLAFHA-SINKSFGKG--SLLSVLRQFARLKSDKQA------- 306
T+ W+ ++ HA +I+ G G ++S ++ + K K A
Sbjct: 66 DETVTEQWIAYFERQQ----LHALAIDAQTGTGIRQIVSAAKEMLKDKFAKMAAKGIKNP 121
Query: 307 --ISVGFVGYPNVGKSSVINTLRTKNV 331
+ VG PNVGKS++IN L +N+
Sbjct: 122 RPMRALIVGIPNVGKSTLINRLAGRNI 148
>sp|Q9VCU5|MTG1_DROME Mitochondrial GTPase 1 OS=Drosophila melanogaster GN=CG17141 PE=1
SV=2
Length = 323
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 10/124 (8%)
Query: 214 DVVVQVLDARDPQGTRCHHLERHLKEHCKHKHMILLLNKCDLVPAWATKGWLRVLSKEYP 273
D +V++ DAR P R + H IL+LNK DL+ A K L+ L ++ P
Sbjct: 42 DCIVEIHDARIPLAGRNSQFFDTITGSGVKPH-ILVLNKVDLLGAKQQKSVLQQLRRQQP 100
Query: 274 SLAFHASIN-KSFGKGSLLSVLRQFARLKSDK------QAI--SVGFVGYPNVGKSSVIN 324
L N K +L +L RL S+ QA ++ +G PNVGKSSVIN
Sbjct: 101 ELQHILFTNCKDQRNNGVLDILPLATRLVSESSRFNRTQAAEHNLMIIGVPNVGKSSVIN 160
Query: 325 TLRT 328
LR
Sbjct: 161 VLRN 164
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131,538,962
Number of Sequences: 539616
Number of extensions: 5384056
Number of successful extensions: 19423
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 306
Number of HSP's that attempted gapping in prelim test: 18713
Number of HSP's gapped (non-prelim): 929
length of query: 355
length of database: 191,569,459
effective HSP length: 118
effective length of query: 237
effective length of database: 127,894,771
effective search space: 30311060727
effective search space used: 30311060727
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)