Query 018455
Match_columns 355
No_of_seqs 188 out of 2004
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 15:32:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018455.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018455hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ka7_A Oxidoreductase; structu 99.9 8.1E-24 2.8E-28 197.9 32.4 267 64-353 112-381 (425)
2 3nks_A Protoporphyrinogen oxid 99.9 7.1E-24 2.4E-28 201.3 22.8 250 93-353 141-426 (477)
3 3i6d_A Protoporphyrinogen oxid 99.9 2.3E-23 7.9E-28 197.2 22.7 326 2-353 65-420 (470)
4 3lov_A Protoporphyrinogen oxid 99.9 8.2E-23 2.8E-27 193.9 22.4 326 2-353 60-417 (475)
5 2ivd_A PPO, PPOX, protoporphyr 99.9 7E-22 2.4E-26 187.6 27.7 319 2-353 70-426 (478)
6 1sez_A Protoporphyrinogen oxid 99.9 3.6E-22 1.2E-26 190.9 21.7 324 2-353 67-446 (504)
7 3nrn_A Uncharacterized protein 99.9 1.7E-19 5.7E-24 168.4 32.1 298 7-350 61-360 (421)
8 1s3e_A Amine oxidase [flavin-c 99.9 3.6E-20 1.2E-24 177.6 24.6 237 92-343 142-389 (520)
9 4dsg_A UDP-galactopyranose mut 99.9 4.1E-20 1.4E-24 175.2 20.7 317 2-353 65-405 (484)
10 4gde_A UDP-galactopyranose mut 99.8 1E-19 3.5E-24 174.1 22.4 319 2-353 66-429 (513)
11 2yg5_A Putrescine oxidase; oxi 99.8 1.5E-19 5E-24 170.4 19.5 237 91-343 141-386 (453)
12 2vvm_A Monoamine oxidase N; FA 99.8 2.5E-17 8.7E-22 156.9 21.2 243 90-353 180-437 (495)
13 3p1w_A Rabgdi protein; GDI RAB 99.7 3.8E-16 1.3E-20 145.8 16.3 210 2-219 93-313 (475)
14 3qj4_A Renalase; FAD/NAD(P)-bi 99.7 2.6E-15 8.9E-20 136.1 17.8 185 154-350 105-296 (342)
15 4dgk_A Phytoene dehydrogenase; 99.6 2.1E-14 7.1E-19 136.9 22.2 229 96-338 164-417 (501)
16 1b37_A Protein (polyamine oxid 99.6 1.4E-14 4.6E-19 137.2 14.4 249 93-353 135-410 (472)
17 2iid_A L-amino-acid oxidase; f 99.6 2.6E-13 8.9E-18 129.2 22.9 216 91-327 178-402 (498)
18 1vg0_A RAB proteins geranylger 99.6 1.2E-13 4.1E-18 132.8 17.8 221 8-259 236-461 (650)
19 2b9w_A Putative aminooxidase; 99.5 5.3E-12 1.8E-16 117.6 20.7 213 93-327 140-357 (424)
20 3k7m_X 6-hydroxy-L-nicotine ox 99.5 7.7E-12 2.6E-16 116.7 21.1 225 91-345 137-367 (431)
21 1d5t_A Guanine nucleotide diss 99.4 2.9E-12 9.8E-17 119.7 16.3 199 7-220 85-290 (433)
22 2jae_A L-amino acid oxidase; o 99.4 1.5E-12 5.2E-17 123.6 13.4 179 152-345 230-418 (489)
23 2z3y_A Lysine-specific histone 99.4 2.8E-12 9.5E-17 126.0 13.5 171 154-345 394-583 (662)
24 2xag_A Lysine-specific histone 99.4 4.8E-12 1.6E-16 126.3 13.9 170 154-344 565-753 (852)
25 2bcg_G Secretory pathway GDP d 99.4 1.4E-11 4.8E-16 115.7 16.0 196 7-219 93-299 (453)
26 1rsg_A FMS1 protein; FAD bindi 99.2 1.6E-10 5.3E-15 110.5 14.5 151 93-260 136-307 (516)
27 4gut_A Lysine-specific histone 99.2 4.7E-11 1.6E-15 118.4 11.1 176 153-344 526-713 (776)
28 1i8t_A UDP-galactopyranose mut 99.2 3.5E-12 1.2E-16 116.5 0.8 202 2-258 56-260 (367)
29 3ayj_A Pro-enzyme of L-phenyla 99.2 2E-11 7E-16 118.9 5.7 160 91-260 279-494 (721)
30 1yvv_A Amine oxidase, flavin-c 99.1 1.6E-09 5.4E-14 97.4 17.0 178 156-352 105-286 (336)
31 1v0j_A UDP-galactopyranose mut 99.1 7.6E-12 2.6E-16 115.6 1.1 206 2-258 65-274 (399)
32 2bi7_A UDP-galactopyranose mut 99.1 2.7E-11 9.2E-16 111.2 3.1 198 1-255 59-260 (384)
33 3hdq_A UDP-galactopyranose mut 99.1 2.1E-11 7.3E-16 111.6 1.8 200 2-258 85-288 (397)
34 2e1m_A L-glutamate oxidase; L- 97.7 0.00011 3.7E-09 66.6 9.5 114 90-217 256-370 (376)
35 2e1m_B L-glutamate oxidase; L- 97.7 2.4E-05 8.3E-10 59.1 4.1 107 205-330 4-112 (130)
36 3dme_A Conserved exported prot 97.6 0.0015 5.1E-08 58.7 14.5 55 164-220 152-209 (369)
37 1ryi_A Glycine oxidase; flavop 97.4 0.0053 1.8E-07 55.5 15.8 54 164-220 166-219 (382)
38 3dje_A Fructosyl amine: oxygen 97.3 0.00062 2.1E-08 63.1 8.6 56 164-221 163-222 (438)
39 3da1_A Glycerol-3-phosphate de 97.3 0.01 3.5E-07 56.9 17.2 55 164-220 172-232 (561)
40 3nyc_A D-arginine dehydrogenas 97.1 0.00099 3.4E-08 60.2 7.3 54 164-220 156-209 (381)
41 2rgh_A Alpha-glycerophosphate 97.0 0.04 1.4E-06 52.8 18.0 55 164-220 190-250 (571)
42 1y56_B Sarcosine oxidase; dehy 96.9 0.0028 9.7E-08 57.3 8.7 55 164-220 151-205 (382)
43 2i0z_A NAD(FAD)-utilizing dehy 96.8 0.0035 1.2E-07 58.2 8.9 65 154-220 126-191 (447)
44 3axb_A Putative oxidoreductase 96.7 0.0038 1.3E-07 58.0 8.2 60 164-226 183-259 (448)
45 2gag_B Heterotetrameric sarcos 96.7 0.0037 1.3E-07 57.0 7.7 55 164-220 176-230 (405)
46 3nlc_A Uncharacterized protein 96.7 0.004 1.4E-07 59.3 8.0 55 164-220 222-277 (549)
47 3fg2_P Putative rubredoxin red 96.6 0.0056 1.9E-07 56.0 8.3 54 164-219 186-240 (404)
48 3lxd_A FAD-dependent pyridine 96.6 0.0054 1.8E-07 56.4 8.2 54 164-219 196-250 (415)
49 2uzz_A N-methyl-L-tryptophan o 96.6 0.0057 1.9E-07 55.1 7.9 54 164-220 151-204 (372)
50 2gf3_A MSOX, monomeric sarcosi 96.5 0.0065 2.2E-07 55.0 8.1 54 164-220 152-205 (389)
51 1pj5_A N,N-dimethylglycine oxi 96.5 0.0062 2.1E-07 61.3 8.6 55 164-220 153-207 (830)
52 3ps9_A TRNA 5-methylaminomethy 96.5 0.0057 1.9E-07 60.1 8.0 54 164-220 419-473 (676)
53 4at0_A 3-ketosteroid-delta4-5a 96.5 0.0086 2.9E-07 56.6 8.8 56 164-220 204-264 (510)
54 3v76_A Flavoprotein; structura 96.5 0.0078 2.7E-07 55.3 8.3 62 155-220 126-187 (417)
55 2oln_A NIKD protein; flavoprot 96.5 0.0063 2.2E-07 55.4 7.6 54 164-220 155-208 (397)
56 3pvc_A TRNA 5-methylaminomethy 96.4 0.0062 2.1E-07 59.9 7.6 54 164-220 414-469 (689)
57 2cdu_A NADPH oxidase; flavoenz 96.2 0.011 3.8E-07 54.9 7.7 54 164-219 193-246 (452)
58 1y0p_A Fumarate reductase flav 96.2 0.015 5.2E-07 55.8 8.8 58 162-220 255-317 (571)
59 3cgv_A Geranylgeranyl reductas 96.0 0.013 4.6E-07 53.0 7.2 55 164-220 104-162 (397)
60 1qo8_A Flavocytochrome C3 fuma 95.9 0.017 5.8E-07 55.4 8.0 58 162-220 250-312 (566)
61 1d4d_A Flavocytochrome C fumar 95.9 0.022 7.6E-07 54.6 8.5 59 161-220 254-317 (572)
62 2gqf_A Hypothetical protein HI 95.7 0.027 9.2E-07 51.5 8.1 54 164-220 111-168 (401)
63 2cul_A Glucose-inhibited divis 95.7 0.025 8.7E-07 47.3 7.2 54 164-220 70-125 (232)
64 3atr_A Conserved archaeal prot 95.7 0.033 1.1E-06 51.6 8.7 56 164-221 102-163 (453)
65 1q1r_A Putidaredoxin reductase 95.6 0.029 9.9E-07 51.7 8.0 54 164-219 193-249 (431)
66 3oc4_A Oxidoreductase, pyridin 95.6 0.025 8.4E-07 52.5 7.4 56 161-219 188-243 (452)
67 3iwa_A FAD-dependent pyridine 95.6 0.034 1.2E-06 51.9 8.4 55 162-219 202-257 (472)
68 2qcu_A Aerobic glycerol-3-phos 95.6 0.03 1E-06 52.7 8.0 54 164-220 151-210 (501)
69 2ywl_A Thioredoxin reductase r 95.6 0.031 1.1E-06 44.5 7.0 53 164-220 58-110 (180)
70 3nix_A Flavoprotein/dehydrogen 95.5 0.035 1.2E-06 50.7 8.0 56 164-220 108-166 (421)
71 2gmh_A Electron transfer flavo 95.5 0.044 1.5E-06 52.7 8.8 57 164-221 146-218 (584)
72 1n4w_A CHOD, cholesterol oxida 95.5 0.023 7.8E-07 53.6 6.7 59 167-225 226-293 (504)
73 1mo9_A ORF3; nucleotide bindin 95.4 0.036 1.2E-06 52.6 8.0 55 164-219 257-315 (523)
74 3ef6_A Toluene 1,2-dioxygenase 95.4 0.028 9.6E-07 51.4 7.0 53 164-219 187-240 (410)
75 2e4g_A Tryptophan halogenase; 95.4 0.036 1.2E-06 52.8 8.0 55 164-220 196-252 (550)
76 2x3n_A Probable FAD-dependent 95.4 0.032 1.1E-06 50.7 7.3 60 164-225 109-172 (399)
77 2weu_A Tryptophan 5-halogenase 95.3 0.044 1.5E-06 51.7 8.1 55 164-220 175-230 (511)
78 3c4n_A Uncharacterized protein 95.3 0.014 4.7E-07 53.4 4.5 54 164-220 174-236 (405)
79 3o0h_A Glutathione reductase; 95.3 0.043 1.5E-06 51.4 7.9 53 164-219 234-287 (484)
80 2wpf_A Trypanothione reductase 95.3 0.042 1.4E-06 51.7 7.8 54 164-219 237-291 (495)
81 3e1t_A Halogenase; flavoprotei 95.2 0.048 1.7E-06 51.5 8.2 55 164-220 113-172 (512)
82 1fec_A Trypanothione reductase 95.2 0.041 1.4E-06 51.6 7.6 54 164-219 233-287 (490)
83 2hqm_A GR, grase, glutathione 95.1 0.049 1.7E-06 50.9 7.8 54 164-218 228-283 (479)
84 1xdi_A RV3303C-LPDA; reductase 95.1 0.05 1.7E-06 51.2 7.8 53 164-219 225-278 (499)
85 1trb_A Thioredoxin reductase; 95.1 0.069 2.4E-06 46.7 8.3 54 164-219 186-246 (320)
86 4dna_A Probable glutathione re 95.1 0.048 1.7E-06 50.7 7.6 53 164-219 213-267 (463)
87 1m6i_A Programmed cell death p 95.1 0.052 1.8E-06 51.0 7.8 53 164-219 228-281 (493)
88 1zk7_A HGII, reductase, mercur 95.0 0.064 2.2E-06 49.9 8.3 53 164-219 218-270 (467)
89 2wdq_A Succinate dehydrogenase 95.0 0.059 2E-06 51.8 8.1 58 162-220 143-206 (588)
90 2v3a_A Rubredoxin reductase; a 95.0 0.055 1.9E-06 48.9 7.4 53 164-219 189-242 (384)
91 1ges_A Glutathione reductase; 94.9 0.061 2.1E-06 49.9 7.7 53 164-218 210-263 (450)
92 1coy_A Cholesterol oxidase; ox 94.9 0.045 1.5E-06 51.6 6.8 59 167-225 231-298 (507)
93 2h88_A Succinate dehydrogenase 94.7 0.081 2.8E-06 51.1 8.2 56 163-220 156-217 (621)
94 2bc0_A NADH oxidase; flavoprot 94.6 0.054 1.8E-06 50.8 6.7 52 164-218 238-289 (490)
95 1rp0_A ARA6, thiazole biosynth 94.6 0.098 3.4E-06 45.1 7.8 53 164-218 121-189 (284)
96 2aqj_A Tryptophan halogenase, 94.6 0.083 2.8E-06 50.2 7.9 55 164-220 167-222 (538)
97 2bs2_A Quinol-fumarate reducta 94.5 0.097 3.3E-06 51.0 8.3 56 163-220 159-220 (660)
98 1onf_A GR, grase, glutathione 94.4 0.099 3.4E-06 49.1 7.9 54 164-219 219-274 (500)
99 3cgb_A Pyridine nucleotide-dis 94.3 0.13 4.4E-06 48.1 8.5 53 164-219 229-281 (480)
100 2yqu_A 2-oxoglutarate dehydrog 94.3 0.095 3.2E-06 48.6 7.5 53 164-219 210-263 (455)
101 4a9w_A Monooxygenase; baeyer-v 94.3 0.094 3.2E-06 46.4 7.3 54 164-220 78-132 (357)
102 3i3l_A Alkylhalidase CMLS; fla 94.2 0.11 3.8E-06 49.9 7.9 55 164-220 130-188 (591)
103 2zxi_A TRNA uridine 5-carboxym 94.2 0.097 3.3E-06 50.4 7.3 54 164-220 125-180 (637)
104 2r9z_A Glutathione amide reduc 94.2 0.11 3.9E-06 48.2 7.8 52 164-218 209-262 (463)
105 2pyx_A Tryptophan halogenase; 94.2 0.13 4.3E-06 48.7 8.2 55 164-220 177-233 (526)
106 3ces_A MNMG, tRNA uridine 5-ca 94.1 0.1 3.5E-06 50.4 7.4 54 164-220 126-181 (651)
107 1nhp_A NADH peroxidase; oxidor 94.1 0.08 2.8E-06 48.9 6.6 53 164-219 193-245 (447)
108 3d1c_A Flavin-containing putat 94.1 0.12 4.2E-06 46.1 7.5 54 164-220 90-143 (369)
109 3ihg_A RDME; flavoenzyme, anth 94.0 0.13 4.5E-06 48.7 7.9 61 164-225 122-189 (535)
110 1kf6_A Fumarate reductase flav 93.8 0.16 5.3E-06 49.0 8.1 57 162-220 134-197 (602)
111 2qa2_A CABE, polyketide oxygen 93.8 0.2 6.7E-06 47.1 8.6 59 164-225 109-172 (499)
112 3itj_A Thioredoxin reductase 1 93.8 0.13 4.6E-06 45.0 7.1 52 166-219 212-270 (338)
113 3alj_A 2-methyl-3-hydroxypyrid 93.7 0.16 5.6E-06 45.6 7.7 57 164-226 109-167 (379)
114 3lad_A Dihydrolipoamide dehydr 93.5 0.21 7.1E-06 46.5 8.3 53 164-219 223-279 (476)
115 1k0i_A P-hydroxybenzoate hydro 93.5 0.27 9.3E-06 44.3 8.8 56 164-221 105-164 (394)
116 3ab1_A Ferredoxin--NADP reduct 93.5 0.16 5.4E-06 45.3 7.1 54 164-219 204-262 (360)
117 3ntd_A FAD-dependent pyridine 93.4 0.18 6.2E-06 48.1 7.7 54 164-219 194-266 (565)
118 2qa1_A PGAE, polyketide oxygen 93.3 0.21 7.2E-06 46.9 7.9 59 164-225 108-171 (500)
119 2gqw_A Ferredoxin reductase; f 93.3 0.19 6.4E-06 45.8 7.4 49 164-219 189-238 (408)
120 2qae_A Lipoamide, dihydrolipoy 93.3 0.27 9.4E-06 45.6 8.6 53 164-219 217-275 (468)
121 2bry_A NEDD9 interacting prote 93.3 0.088 3E-06 49.5 5.2 58 164-221 168-231 (497)
122 2eq6_A Pyruvate dehydrogenase 93.2 0.26 9E-06 45.7 8.4 52 164-218 212-269 (464)
123 3cty_A Thioredoxin reductase; 93.2 0.21 7.1E-06 43.6 7.3 51 166-218 194-250 (319)
124 2e5v_A L-aspartate oxidase; ar 93.1 0.16 5.6E-06 47.3 6.8 54 164-220 121-176 (472)
125 3lzw_A Ferredoxin--NADP reduct 93.1 0.23 7.7E-06 43.4 7.4 53 164-218 69-121 (332)
126 1zmd_A Dihydrolipoyl dehydroge 93.0 0.27 9.2E-06 45.7 8.1 54 164-219 222-281 (474)
127 3fmw_A Oxygenase; mithramycin, 93.0 0.12 4.1E-06 49.4 5.8 59 164-225 150-213 (570)
128 3ics_A Coenzyme A-disulfide re 92.9 0.2 6.7E-06 48.1 7.3 51 164-219 230-281 (588)
129 3dk9_A Grase, GR, glutathione 92.8 0.4 1.4E-05 44.6 9.0 55 164-219 230-292 (478)
130 1chu_A Protein (L-aspartate ox 92.7 0.13 4.5E-06 48.8 5.6 56 164-220 140-208 (540)
131 2a8x_A Dihydrolipoyl dehydroge 92.7 0.35 1.2E-05 44.8 8.4 52 164-218 214-269 (464)
132 3r9u_A Thioredoxin reductase; 92.7 0.23 7.9E-06 43.0 6.8 50 168-219 189-243 (315)
133 1ojt_A Surface protein; redox- 92.5 0.21 7.2E-06 46.6 6.7 53 164-219 228-285 (482)
134 3dgh_A TRXR-1, thioredoxin red 92.5 0.25 8.6E-06 46.1 7.2 53 164-218 229-287 (483)
135 3gwf_A Cyclohexanone monooxyge 92.4 0.24 8.1E-06 47.0 6.9 55 164-219 89-146 (540)
136 3urh_A Dihydrolipoyl dehydroge 92.4 0.35 1.2E-05 45.2 8.0 52 164-218 241-298 (491)
137 2vou_A 2,6-dihydroxypyridine h 92.3 0.33 1.1E-05 43.9 7.5 58 164-226 101-160 (397)
138 1ebd_A E3BD, dihydrolipoamide 92.3 0.33 1.1E-05 44.9 7.6 53 164-219 213-269 (455)
139 4ap3_A Steroid monooxygenase; 92.2 0.27 9.2E-06 46.8 7.1 55 164-219 101-158 (549)
140 3rp8_A Flavoprotein monooxygen 92.2 0.2 6.7E-06 45.6 5.9 57 164-225 129-187 (407)
141 3ab1_A Ferredoxin--NADP reduct 92.2 0.35 1.2E-05 43.0 7.4 53 164-218 76-129 (360)
142 1fl2_A Alkyl hydroperoxide red 92.1 0.32 1.1E-05 42.1 6.9 56 164-219 58-114 (310)
143 3h8l_A NADH oxidase; membrane 92.0 0.19 6.5E-06 45.7 5.6 49 164-219 220-269 (409)
144 2zbw_A Thioredoxin reductase; 92.0 0.51 1.7E-05 41.3 8.3 53 164-219 193-251 (335)
145 1vdc_A NTR, NADPH dependent th 91.9 0.33 1.1E-05 42.5 6.9 52 164-219 72-123 (333)
146 1v59_A Dihydrolipoamide dehydr 91.9 0.41 1.4E-05 44.6 7.8 52 164-218 226-285 (478)
147 3cp8_A TRNA uridine 5-carboxym 91.9 0.3 1E-05 47.1 6.9 54 164-220 119-174 (641)
148 1dxl_A Dihydrolipoamide dehydr 91.7 0.37 1.2E-05 44.7 7.3 53 164-219 220-278 (470)
149 2zbw_A Thioredoxin reductase; 91.7 0.4 1.4E-05 42.0 7.2 53 164-219 67-120 (335)
150 3oz2_A Digeranylgeranylglycero 91.2 0.51 1.7E-05 42.2 7.5 60 164-225 104-168 (397)
151 1jnr_A Adenylylsulfate reducta 91.1 0.46 1.6E-05 46.2 7.4 57 164-220 153-218 (643)
152 1y56_A Hypothetical protein PH 90.9 0.3 1E-05 45.7 5.8 49 168-219 263-312 (493)
153 4b1b_A TRXR, thioredoxin reduc 90.8 0.58 2E-05 44.3 7.6 52 164-218 265-317 (542)
154 3uox_A Otemo; baeyer-villiger 90.7 0.41 1.4E-05 45.5 6.6 56 164-220 89-147 (545)
155 2gv8_A Monooxygenase; FMO, FAD 90.5 0.38 1.3E-05 44.3 6.1 53 164-219 117-176 (447)
156 2gjc_A Thiazole biosynthetic e 90.4 0.88 3E-05 40.0 7.9 56 164-219 148-238 (326)
157 3klj_A NAD(FAD)-dependent dehy 90.4 0.47 1.6E-05 42.9 6.4 44 170-218 70-114 (385)
158 2xve_A Flavin-containing monoo 90.4 0.47 1.6E-05 44.0 6.5 55 164-219 103-165 (464)
159 3h28_A Sulfide-quinone reducta 90.3 0.43 1.5E-05 43.7 6.2 50 164-218 202-254 (430)
160 1fl2_A Alkyl hydroperoxide red 90.3 0.6 2E-05 40.3 6.9 50 167-218 184-240 (310)
161 3k30_A Histamine dehydrogenase 90.2 0.23 7.7E-06 48.8 4.5 50 165-219 570-623 (690)
162 1kdg_A CDH, cellobiose dehydro 90.1 0.46 1.6E-05 45.1 6.4 57 167-225 200-266 (546)
163 3dgz_A Thioredoxin reductase 2 90.1 0.85 2.9E-05 42.5 8.1 54 164-219 227-286 (488)
164 2xdo_A TETX2 protein; tetracyc 90.0 0.33 1.1E-05 44.0 5.1 42 176-220 140-182 (398)
165 3ic9_A Dihydrolipoamide dehydr 90.0 0.98 3.4E-05 42.2 8.5 52 164-219 217-273 (492)
166 1hyu_A AHPF, alkyl hydroperoxi 90.0 0.54 1.8E-05 44.4 6.7 56 164-219 269-325 (521)
167 3jsk_A Cypbp37 protein; octame 89.9 0.84 2.9E-05 40.4 7.5 57 164-220 162-251 (344)
168 3kd9_A Coenzyme A disulfide re 89.9 0.58 2E-05 43.1 6.7 56 160-219 188-243 (449)
169 1w4x_A Phenylacetone monooxyge 89.5 0.67 2.3E-05 43.9 7.0 55 164-219 96-153 (542)
170 3lzw_A Ferredoxin--NADP reduct 89.4 0.6 2E-05 40.6 6.2 49 168-219 195-249 (332)
171 3gyx_A Adenylylsulfate reducta 89.4 0.56 1.9E-05 45.7 6.4 57 164-220 168-233 (662)
172 2jbv_A Choline oxidase; alcoho 89.3 0.5 1.7E-05 44.9 5.9 51 174-225 221-278 (546)
173 3s5w_A L-ornithine 5-monooxyge 89.3 0.49 1.7E-05 43.7 5.8 55 164-218 129-190 (463)
174 3c96_A Flavin-containing monoo 89.3 0.86 2.9E-05 41.3 7.3 58 164-225 109-175 (410)
175 4g6h_A Rotenone-insensitive NA 89.3 0.66 2.3E-05 43.5 6.7 55 160-217 270-329 (502)
176 2q0l_A TRXR, thioredoxin reduc 88.9 1.2 4E-05 38.4 7.7 51 167-219 183-240 (311)
177 3pl8_A Pyranose 2-oxidase; sub 88.9 0.62 2.1E-05 45.0 6.4 52 175-226 273-330 (623)
178 3f8d_A Thioredoxin reductase ( 88.5 0.84 2.9E-05 39.4 6.5 52 164-219 72-124 (323)
179 1xhc_A NADH oxidase /nitrite r 88.1 0.7 2.4E-05 41.3 5.8 48 164-219 185-233 (367)
180 2q0l_A TRXR, thioredoxin reduc 87.8 1.2 4.2E-05 38.3 7.1 52 164-219 61-113 (311)
181 1vdc_A NTR, NADPH dependent th 87.7 1.4 4.7E-05 38.4 7.4 49 171-219 204-258 (333)
182 3vrd_B FCCB subunit, flavocyto 87.6 0.26 8.8E-06 44.6 2.6 45 172-219 212-257 (401)
183 3f8d_A Thioredoxin reductase ( 87.5 1.4 4.7E-05 38.0 7.2 50 168-220 195-251 (323)
184 4eqs_A Coenzyme A disulfide re 87.4 0.65 2.2E-05 42.7 5.2 48 164-218 190-238 (437)
185 3cty_A Thioredoxin reductase; 87.2 1.1 3.8E-05 38.8 6.5 52 164-219 74-125 (319)
186 3sx6_A Sulfide-quinone reducta 87.2 1 3.5E-05 41.3 6.4 49 164-217 210-266 (437)
187 3itj_A Thioredoxin reductase 1 87.2 1.4 4.8E-05 38.3 7.1 52 164-219 86-141 (338)
188 1lvl_A Dihydrolipoamide dehydr 86.7 0.84 2.9E-05 42.2 5.6 51 164-219 214-267 (458)
189 3s5w_A L-ornithine 5-monooxyge 86.3 2.9 9.9E-05 38.4 9.1 42 175-219 329-376 (463)
190 4hb9_A Similarities with proba 86.2 1.5 5.2E-05 39.3 7.0 50 174-225 121-172 (412)
191 2r0c_A REBC; flavin adenine di 86.1 2 6.9E-05 40.7 8.0 56 164-225 140-202 (549)
192 2q7v_A Thioredoxin reductase; 86.0 2.2 7.5E-05 37.0 7.7 49 167-218 192-247 (325)
193 3hyw_A Sulfide-quinone reducta 85.6 1.3 4.5E-05 40.5 6.3 50 164-218 202-254 (430)
194 2dkh_A 3-hydroxybenzoate hydro 85.4 2.1 7.1E-05 41.5 7.8 62 164-226 143-218 (639)
195 3fbs_A Oxidoreductase; structu 85.1 1.4 4.6E-05 37.6 5.8 60 152-219 165-225 (297)
196 1trb_A Thioredoxin reductase; 84.9 2.5 8.6E-05 36.4 7.6 52 164-219 64-115 (320)
197 3q9t_A Choline dehydrogenase a 84.2 1.5 5.3E-05 41.8 6.2 53 173-225 217-275 (577)
198 3qvp_A Glucose oxidase; oxidor 84.2 1.6 5.4E-05 41.8 6.2 54 173-226 238-299 (583)
199 1gpe_A Protein (glucose oxidas 84.0 1.4 4.8E-05 42.2 5.9 54 173-226 242-303 (587)
200 3d1c_A Flavin-containing putat 84.0 1.7 5.7E-05 38.5 6.1 53 164-219 216-271 (369)
201 2e1m_C L-glutamate oxidase; L- 83.5 0.54 1.9E-05 37.5 2.3 44 303-346 48-95 (181)
202 2q7v_A Thioredoxin reductase; 82.4 3.3 0.00011 35.8 7.3 53 164-219 67-122 (325)
203 2a87_A TRXR, TR, thioredoxin r 82.1 3 0.0001 36.3 6.9 51 164-219 73-125 (335)
204 3fbs_A Oxidoreductase; structu 82.0 2.7 9.2E-05 35.7 6.4 52 164-219 58-111 (297)
205 3fim_B ARYL-alcohol oxidase; A 81.4 1.5 5.2E-05 41.7 4.9 55 172-226 218-282 (566)
206 1ps9_A 2,4-dienoyl-COA reducta 81.3 2.8 9.6E-05 40.8 6.9 49 166-219 577-627 (671)
207 1q1r_A Putidaredoxin reductase 81.0 2.5 8.6E-05 38.6 6.1 45 170-219 68-113 (431)
208 1xhc_A NADH oxidase /nitrite r 80.7 2.5 8.5E-05 37.7 5.9 43 171-218 69-111 (367)
209 3qfa_A Thioredoxin reductase 1 80.6 4.8 0.00016 37.7 8.1 54 164-218 252-313 (519)
210 1hyu_A AHPF, alkyl hydroperoxi 80.4 3 0.0001 39.2 6.5 50 167-218 395-451 (521)
211 1ju2_A HydroxynitrIle lyase; f 80.3 2.6 8.8E-05 39.8 6.1 55 172-226 204-267 (536)
212 1cjc_A Protein (adrenodoxin re 79.4 3.7 0.00013 37.9 6.7 44 175-219 270-332 (460)
213 2a87_A TRXR, TR, thioredoxin r 78.4 2.6 8.9E-05 36.7 5.2 45 172-219 201-251 (335)
214 3ef6_A Toluene 1,2-dioxygenase 77.1 3.4 0.00012 37.4 5.7 42 172-218 67-109 (410)
215 2gag_A Heterotetrameric sarcos 76.5 3.7 0.00013 41.9 6.2 49 169-218 323-381 (965)
216 4b63_A L-ornithine N5 monooxyg 75.9 5 0.00017 37.4 6.6 55 164-218 147-212 (501)
217 2x8g_A Thioredoxin glutathione 75.7 8.2 0.00028 36.8 8.2 55 164-219 328-394 (598)
218 4fk1_A Putative thioredoxin re 75.2 6 0.00021 33.9 6.6 52 165-218 63-115 (304)
219 2v3a_A Rubredoxin reductase; a 75.1 5.6 0.00019 35.5 6.5 44 171-219 69-112 (384)
220 4fk1_A Putative thioredoxin re 74.6 4.1 0.00014 34.9 5.4 50 164-216 182-232 (304)
221 3l8k_A Dihydrolipoyl dehydroge 74.3 4.1 0.00014 37.5 5.6 51 164-219 216-271 (466)
222 3t37_A Probable dehydrogenase; 73.4 6.2 0.00021 36.9 6.6 51 174-226 223-277 (526)
223 1o94_A Tmadh, trimethylamine d 73.1 3.1 0.00011 40.9 4.6 49 166-219 575-645 (729)
224 1gte_A Dihydropyrimidine dehyd 72.4 10 0.00035 38.9 8.4 47 170-218 378-440 (1025)
225 3r9u_A Thioredoxin reductase; 72.3 5.2 0.00018 34.1 5.5 51 164-218 64-116 (315)
226 3lxd_A FAD-dependent pyridine 72.1 4.5 0.00015 36.6 5.2 44 170-218 73-117 (415)
227 2gqw_A Ferredoxin reductase; f 71.9 3.1 0.00011 37.6 4.0 42 173-219 70-112 (408)
228 3hyw_A Sulfide-quinone reducta 70.2 5.1 0.00017 36.5 5.1 42 172-219 66-108 (430)
229 2bc0_A NADH oxidase; flavoprot 69.1 7.6 0.00026 36.0 6.1 46 171-219 101-148 (490)
230 3oc4_A Oxidoreductase, pyridin 68.8 7.8 0.00027 35.5 6.1 46 170-218 66-113 (452)
231 1nhp_A NADH peroxidase; oxidor 67.6 11 0.00039 34.3 6.9 47 170-219 64-114 (447)
232 3ics_A Coenzyme A-disulfide re 67.5 12 0.0004 35.6 7.2 48 168-218 99-150 (588)
233 1lqt_A FPRA; NADP+ derivative, 66.1 6.7 0.00023 36.1 5.0 42 175-219 265-325 (456)
234 1m6i_A Programmed cell death p 66.0 5 0.00017 37.3 4.1 40 174-218 102-142 (493)
235 2cdu_A NADPH oxidase; flavoenz 65.9 12 0.00039 34.3 6.6 46 170-218 66-115 (452)
236 2vdc_G Glutamate synthase [NAD 65.8 4 0.00014 37.6 3.4 47 170-219 310-377 (456)
237 3g3e_A D-amino-acid oxidase; F 65.6 1.5 5E-05 38.7 0.4 44 164-221 144-187 (351)
238 3sx6_A Sulfide-quinone reducta 65.4 8.4 0.00029 35.0 5.5 46 168-219 65-111 (437)
239 3cgb_A Pyridine nucleotide-dis 64.7 14 0.0005 34.0 7.1 42 174-218 105-150 (480)
240 3ntd_A FAD-dependent pyridine 64.5 12 0.0004 35.3 6.6 44 172-218 68-115 (565)
241 1pn0_A Phenol 2-monooxygenase; 64.0 15 0.00052 35.5 7.3 29 164-192 121-152 (665)
242 3uox_A Otemo; baeyer-villiger 63.5 6.1 0.00021 37.3 4.3 45 168-220 344-391 (545)
243 4eqs_A Coenzyme A disulfide re 62.2 11 0.00038 34.3 5.7 45 172-219 67-115 (437)
244 3fg2_P Putative rubredoxin red 61.4 14 0.00047 33.2 6.1 43 170-218 65-108 (404)
245 3kd9_A Coenzyme A disulfide re 60.4 9.9 0.00034 34.7 5.0 41 173-218 70-112 (449)
246 3gwf_A Cyclohexanone monooxyge 58.1 5.3 0.00018 37.7 2.8 43 172-221 340-385 (540)
247 3h8l_A NADH oxidase; membrane 57.9 13 0.00046 33.2 5.4 48 167-219 61-112 (409)
248 4a5l_A Thioredoxin reductase; 57.8 27 0.00093 29.5 7.2 52 164-218 68-119 (314)
249 3iwa_A FAD-dependent pyridine 57.1 16 0.00054 33.5 5.9 42 174-218 78-123 (472)
250 1c0p_A D-amino acid oxidase; a 56.9 4.8 0.00017 35.5 2.2 43 164-221 144-186 (363)
251 1ebd_A E3BD, dihydrolipoamide 54.2 25 0.00086 32.0 6.7 47 166-218 95-143 (455)
252 2a8x_A Dihydrolipoyl dehydroge 52.9 26 0.00087 32.0 6.5 50 164-219 93-145 (464)
253 3klj_A NAD(FAD)-dependent dehy 52.6 3.7 0.00013 36.8 0.7 41 164-219 190-230 (385)
254 3vrd_B FCCB subunit, flavocyto 51.4 23 0.00079 31.5 5.9 42 172-219 65-107 (401)
255 1dxl_A Dihydrolipoamide dehydr 51.3 29 0.00098 31.7 6.6 48 166-219 100-150 (470)
256 1v59_A Dihydrolipoamide dehydr 50.6 22 0.00075 32.6 5.7 50 165-220 99-157 (478)
257 4gcm_A TRXR, thioredoxin reduc 49.0 36 0.0012 28.8 6.5 51 165-219 65-115 (312)
258 1y56_A Hypothetical protein PH 47.6 19 0.00066 33.3 4.8 43 174-218 172-217 (493)
259 3h28_A Sulfide-quinone reducta 46.3 14 0.00048 33.5 3.5 43 171-219 65-108 (430)
260 4ap3_A Steroid monooxygenase; 45.6 14 0.00047 34.9 3.4 43 171-221 352-397 (549)
261 1ojt_A Surface protein; redox- 44.8 34 0.0012 31.4 6.0 48 166-219 99-159 (482)
262 3c4a_A Probable tryptophan hyd 43.8 7.6 0.00026 34.5 1.3 45 164-221 100-144 (381)
263 2eq6_A Pyruvate dehydrogenase 42.3 56 0.0019 29.8 7.0 44 168-219 99-142 (464)
264 1lvl_A Dihydrolipoamide dehydr 40.2 73 0.0025 28.9 7.5 44 168-219 102-145 (458)
265 2yqu_A 2-oxoglutarate dehydrog 40.2 35 0.0012 31.0 5.3 46 167-218 94-139 (455)
266 2qae_A Lipoamide, dihydrolipoy 38.6 57 0.002 29.7 6.5 47 166-218 97-146 (468)
267 4a5l_A Thioredoxin reductase; 35.5 88 0.003 26.2 6.9 46 171-218 197-248 (314)
268 2r9z_A Glutathione amide reduc 35.1 81 0.0028 28.7 6.9 45 166-218 96-140 (463)
269 1zmd_A Dihydrolipoyl dehydroge 34.0 91 0.0031 28.3 7.1 47 167-219 102-151 (474)
270 1w4x_A Phenylacetone monooxyge 33.9 38 0.0013 31.7 4.5 46 168-220 344-391 (542)
271 3l8k_A Dihydrolipoyl dehydroge 32.4 51 0.0017 30.0 5.0 45 168-218 95-142 (466)
272 1xdi_A RV3303C-LPDA; reductase 32.2 57 0.002 30.0 5.4 51 166-218 99-154 (499)
273 1fec_A Trypanothione reductase 31.8 72 0.0025 29.3 6.0 47 166-218 107-161 (490)
274 3dk9_A Grase, GR, glutathione 30.9 68 0.0023 29.3 5.6 47 166-218 112-158 (478)
275 4b63_A L-ornithine N5 monooxyg 30.6 64 0.0022 29.8 5.4 42 178-219 355-408 (501)
276 4a9w_A Monooxygenase; baeyer-v 30.6 42 0.0014 28.8 4.0 37 175-219 247-284 (357)
277 2hqm_A GR, grase, glutathione 29.9 76 0.0026 29.0 5.8 47 166-218 109-158 (479)
278 1ges_A Glutathione reductase; 28.6 1.1E+02 0.0039 27.5 6.7 44 167-218 98-141 (450)
279 2gag_A Heterotetrameric sarcos 28.0 97 0.0033 31.4 6.5 50 166-218 185-251 (965)
280 1zk7_A HGII, reductase, mercur 26.5 80 0.0027 28.7 5.3 43 170-218 102-148 (467)
281 2wpf_A Trypanothione reductase 24.7 1E+02 0.0035 28.3 5.7 47 166-218 111-165 (495)
282 1mo9_A ORF3; nucleotide bindin 23.3 1.1E+02 0.0038 28.3 5.6 39 173-218 146-184 (523)
283 3lad_A Dihydrolipoamide dehydr 21.2 1.5E+02 0.0053 26.8 6.1 47 166-218 103-152 (476)
284 2gv8_A Monooxygenase; FMO, FAD 21.1 78 0.0027 28.5 4.0 35 180-219 255-291 (447)
285 3urh_A Dihydrolipoyl dehydroge 21.0 2.3E+02 0.0079 25.7 7.3 47 167-219 120-169 (491)
286 2xve_A Flavin-containing monoo 21.0 1E+02 0.0035 28.1 4.8 20 200-219 255-275 (464)
No 1
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.94 E-value=8.1e-24 Score=197.92 Aligned_cols=267 Identities=11% Similarity=0.082 Sum_probs=192.1
Q ss_pred CCCHHhhhchhhHHHHHhccCCChhhhhhcccccHHHHHHHhCCCHHHHHHHHHHHHHhhhCCChhhccHHHHHHHHHHH
Q 018455 64 RLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFI 143 (355)
Q Consensus 64 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~~~~~~ 143 (355)
.+++.++++....+.... . ...++.|+.+|++++ ++++..+.++++++...++.+++++|+..++..+...
T Consensus 112 ~~~~~~~~~~~~~~~~~~-----~---~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 182 (425)
T 3ka7_A 112 LLSYKDRMKIALLIVSTR-----K---NRPSGSSLQAWIKSQ-VSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENM 182 (425)
T ss_dssp GSCHHHHHHHHHHHHHTT-----T---SCCCSSBHHHHHHHH-CCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHhhh-----h---cCCCCCCHHHHHHHh-cCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHH
Confidence 356777776544322211 0 124578999999998 6677778899999999999999999999888877764
Q ss_pred HHhcCCCcceEEecCCcchHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChhhHHH
Q 018455 144 ILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQE 223 (355)
Q Consensus 144 ~~~~~~~~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~~~~ 223 (355)
. ... ...+++||++. ++++|++.++++|++|+++++|++|..++ +++++|+++|++++||.||+|+|++.+.+
T Consensus 183 ~-~~~---~~~~~~gG~~~-l~~~l~~~~~~~G~~i~~~~~V~~i~~~~--~~~~gv~~~g~~~~ad~VV~a~~~~~~~~ 255 (425)
T 3ka7_A 183 Y-RFG---GTGIPEGGCKG-IIDALETVISANGGKIHTGQEVSKILIEN--GKAAGIIADDRIHDADLVISNLGHAATAV 255 (425)
T ss_dssp H-HHC---SCEEETTSHHH-HHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTEEEECSEEEECSCHHHHHH
T ss_pred H-hcC---CccccCCCHHH-HHHHHHHHHHHcCCEEEECCceeEEEEEC--CEEEEEEECCEEEECCEEEECCCHHHHHH
Confidence 2 211 24689999988 88999999999999999999999999987 45777888999999999999999999999
Q ss_pred hhhccc-cc-CcHHHHhhccCCcccEEEEEEEEccCCCCCCCCcceeccCC-CccceeeEcccccccccCCCceEEEEEe
Q 018455 224 LIKNSI-LC-NREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGD-SLAWTFFDLNKIYDEHKDDSATVIQADF 300 (355)
Q Consensus 224 l~~~~~-l~-~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~l~~~~ 300 (355)
|++... ++ ...+.+.+.++.+++.++++++++++++. .++.+++.+. .+.. +...|...|..++++++++.+.+
T Consensus 256 ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~--~~~~~~~~~~~~~~~-~~~~s~~~p~~ap~G~~~l~~~~ 332 (425)
T 3ka7_A 256 LCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLVG--HTGVLLTPYTRRING-VNEVTQADPELAPPGKHLTMCHQ 332 (425)
T ss_dssp HTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSSC--SSSEEECCSSSSEEE-EECGGGTCGGGSCTTCEEEEEEE
T ss_pred hcCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCccC--cCEEEECCChhhcce-EEeccCCCCCcCCCCCeEEEEEe
Confidence 987432 11 13344567778888888999999998762 3444444332 2222 33345556666544556655544
Q ss_pred eCCCCCCCCCHHHHHHHHHHHHhhhcccCCCceeeeeeEEecCCCccccCCCC
Q 018455 301 YHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGS 353 (355)
Q Consensus 301 ~~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~v~~~~~a~~~~~pg~ 353 (355)
....+..+. .++.++.++++|++++|+.. .++ ..+.+|+.++|++.||.
T Consensus 333 ~~~~~~~~~-~~~~~~~~~~~l~~~~p~~~-~~~--~~v~~~~~~~P~~~~~~ 381 (425)
T 3ka7_A 333 YVAPENVKN-LESEIEMGLEDLKEIFPGKR-YEV--LLIQSYHDEWPVNRAAS 381 (425)
T ss_dssp EECGGGGGG-HHHHHHHHHHHHHHHSTTCC-EEE--EEEEEEBTTBCSBSSCT
T ss_pred ccccccccc-hHHHHHHHHHHHHHhCCCCc-eEE--EEEEEECCCcccccccc
Confidence 332222222 24557899999999999842 444 47899999999999884
No 2
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.92 E-value=7.1e-24 Score=201.27 Aligned_cols=250 Identities=12% Similarity=0.082 Sum_probs=183.4
Q ss_pred cccccHHHHHHHhCCCHHHHHHHHHHHHHhhhCCChhhccHHHHHHHHHHHH----------Hhc---------------
Q 018455 93 YDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII----------LAH--------------- 147 (355)
Q Consensus 93 ~d~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~~~~~~~----------~~~--------------- 147 (355)
.+++|+.+|++++ +++++.+.+++|++.++++.+++++|+..++..+.... +..
T Consensus 141 ~~~~s~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~ 219 (477)
T 3nks_A 141 EPDETVHSFAQRR-LGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQA 219 (477)
T ss_dssp SSCCBHHHHHHHH-HCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHH
T ss_pred CCCcCHHHHHHHh-hCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhh
Confidence 5678999999996 88999999999999999999999999998876654320 000
Q ss_pred -CCCcceEEecCCcchHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChhhHHHhhh
Q 018455 148 -QKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIK 226 (355)
Q Consensus 148 -~~~~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~~~~l~~ 226 (355)
..+..+.+++||+++ ++++|++.+++.|++|++|++|++|..+++ .++.|++++++++||+||+|+|++.+.+|++
T Consensus 220 ~~~~~~~~~~~gG~~~-l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~--~~~~v~~~~~~~~ad~vv~a~p~~~~~~ll~ 296 (477)
T 3nks_A 220 LAERWSQWSLRGGLEM-LPQALETHLTSRGVSVLRGQPVCGLSLQAE--GRWKVSLRDSSLEADHVISAIPASVLSELLP 296 (477)
T ss_dssp HHTTCSEEEETTCTTH-HHHHHHHHHHHTTCEEECSCCCCEEEECGG--GCEEEECSSCEEEESEEEECSCHHHHHHHSC
T ss_pred cccCccEEEECCCHHH-HHHHHHHHHHhcCCEEEeCCEEEEEEEcCC--ceEEEEECCeEEEcCEEEECCCHHHHHHhcc
Confidence 011245778999999 889999999999999999999999998764 2456777778899999999999999999986
Q ss_pred cccccCcHHHHhhccCCcccEEEEEEEEccCCCCCCCCcceeccC---CCccceeeEccccccccc-CCCceEEEEEeeC
Q 018455 227 NSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFG---DSLAWTFFDLNKIYDEHK-DDSATVIQADFYH 302 (355)
Q Consensus 227 ~~~l~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~g~~l~~~~~~ 302 (355)
+.. ++....+.++++.++.+++++|+++++.....+.++... ...++ +|+.+. .+... +++.+++.+.+..
T Consensus 297 ~~~---~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~g~l~~~~~~~~~~~~-~~~s~~-~~~~~~~~~~~~l~~~~gg 371 (477)
T 3nks_A 297 AEA---APLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGI-VYDSVA-FPEQDGSPPGLRVTVMLGG 371 (477)
T ss_dssp GGG---HHHHHHHHTCCEEEEEEEEEEETTCCCSSCSSEEECCTTTCSSEEEE-ECHHHH-CGGGSTTTTCEEEEEEECH
T ss_pred ccC---HHHHHHHhcCCCCcEEEEEEEECCCCCCCCCceEEccCCCCCCceEE-EEeccc-cCCCCCCCCceEEEEEECC
Confidence 532 233346778888899999999999877312222222211 12233 465332 33322 2344555443331
Q ss_pred --C----CCCCCCCHHHHHHHHHHHHhhhcccCCCceeeeeeEEecCCCccccCCCC
Q 018455 303 --A----NELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGS 353 (355)
Q Consensus 303 --~----~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~v~~~~~a~~~~~pg~ 353 (355)
. +....++++++++.++++|+++++.. ..+....+++|++++|++.||+
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~--~~~~~~~v~rw~~a~p~~~~g~ 426 (477)
T 3nks_A 372 SWLQTLEASGCVLSQELFQQRAQEAAATQLGLK--EMPSHCLVHLHKNCIPQYTLGH 426 (477)
T ss_dssp HHHHHHHHSSCCCCHHHHHHHHHHHHHHHHCCC--SCCSEEEEEEEEEEEECCBTTH
T ss_pred ccccccccccCCCCHHHHHHHHHHHHHHHhCCC--CCCcEEEEEEcCCccCCCCCCH
Confidence 1 11235689999999999999999753 4567889999999999999985
No 3
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.92 E-value=2.3e-23 Score=197.22 Aligned_cols=326 Identities=14% Similarity=0.131 Sum_probs=204.3
Q ss_pred cccccCCchHHHHHHHhCCCCCCCcc--cceeecCCCceecccccccCCCCCCCccccccccCCCCCHHhhhchhhHHHH
Q 018455 2 QGFWYPFRNIFSLVDELGIKPFTGWM--KSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAA 79 (355)
Q Consensus 2 H~~~~~y~~~~~l~~elGl~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~p~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 79 (355)
|.+...|+++.+|++++|++...... ...++..+|+... +........|.+...+++.+.+++.++++... .
T Consensus 65 ~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---~ 138 (470)
T 3i6d_A 65 DSFLERKKSAPQLVKDLGLEHLLVNNATGQSYVLVNRTLHP---MPKGAVMGIPTKIAPFVSTGLFSLSGKARAAM---D 138 (470)
T ss_dssp CCEETTCTHHHHHHHHTTCCTTEEECCCCCEEEECSSCEEE---CCC---------------------CCSHHHHH---H
T ss_pred hhhhhCCHHHHHHHHHcCCcceeecCCCCccEEEECCEEEE---CCCCcccCCcCchHHhhccCcCCHHHHHHHhc---C
Confidence 66778899999999999998654321 2222224454321 11100011222222234445555555555322 2
Q ss_pred HhccCCChhhhhhcccccHHHHHHHhCCCHHHHHHHHHHHHHhhhCCChhhccHHHHHHHHHHHH------Hhc------
Q 018455 80 VIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII------LAH------ 147 (355)
Q Consensus 80 ~~~~~~~~~~~~~~d~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~~~~~~~------~~~------ 147 (355)
.... .....+++|+.+|+++. ++.+..+.++.|++.++++.+++++|+..++..+..+. ...
T Consensus 139 ~~~~-----~~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (470)
T 3i6d_A 139 FILP-----ASKTKDDQSLGEFFRRR-VGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRP 212 (470)
T ss_dssp HHSC-----CCSSSSCCBHHHHHHHH-SCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC-----------------
T ss_pred cccC-----CCCCCCCcCHHHHHHHh-cCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhcc
Confidence 2211 11246789999999997 88898999999999999999999999987765442110 000
Q ss_pred ---------CCCcceEEecCCcchHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccC
Q 018455 148 ---------QKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVG 217 (355)
Q Consensus 148 ---------~~~~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p 217 (355)
........++||++. +++.|++.+.+ ++|+++++|++|+.++++ + .|++ +|++++||+||+|+|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~g~~~-l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~--~-~v~~~~g~~~~ad~vi~a~p 286 (470)
T 3i6d_A 213 QGSGQQLTAKKQGQFQTLSTGLQT-LVEEIEKQLKL--TKVYKGTKVTKLSHSGSC--Y-SLELDNGVTLDADSVIVTAP 286 (470)
T ss_dssp --------------EEEETTCTHH-HHHHHHHTCCS--EEEECSCCEEEEEECSSS--E-EEEESSSCEEEESEEEECSC
T ss_pred ccccccccccCCceEEEeCChHHH-HHHHHHHhcCC--CEEEeCCceEEEEEcCCe--E-EEEECCCCEEECCEEEECCC
Confidence 001245568899988 67777766543 799999999999998753 5 5776 677899999999999
Q ss_pred hhhHHHhhhcccccCcHHHHhhccCCcccEEEEEEEEccCCCCCCCC--cceeccCCCc--cceeeEcccccccccCCCc
Q 018455 218 ISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVS--NACSGFGDSL--AWTFFDLNKIYDEHKDDSA 293 (355)
Q Consensus 218 ~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g 293 (355)
++.+.+|++++++ . ..+.++++.++.++++.|++++|..... +.+....... ..++++ +...+...+++.
T Consensus 287 ~~~~~~l~~~~~~--~---~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~-s~~~~~~~p~~~ 360 (470)
T 3i6d_A 287 HKAAAGMLSELPA--I---SHLKNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTWT-NKKWPHAAPEGK 360 (470)
T ss_dssp HHHHHHHTTTSTT--H---HHHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEH-HHHCGGGSCTTC
T ss_pred HHHHHHHcCCchh--h---HHHhcCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEEE-cCcCCCcCCCCC
Confidence 9999999876532 2 3667888889999999999998732111 1122212221 112232 222233332233
Q ss_pred eEEEEEee--CCCCCCCCCHHHHHHHHHHHHhhhcccCCCceeeeeeEEecCCCccccCCCC
Q 018455 294 TVIQADFY--HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGS 353 (355)
Q Consensus 294 ~~l~~~~~--~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~v~~~~~a~~~~~pg~ 353 (355)
.++.+.+. .+..+..++++++++.++++|+++||.. .++....+++|++++|.+.||+
T Consensus 361 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~--~~p~~~~~~~w~~a~p~~~~g~ 420 (470)
T 3i6d_A 361 TLLRAYVGKAGDESIVDLSDNDIINIVLEDLKKVMNIN--GEPEMTCVTRWHESMPQYHVGH 420 (470)
T ss_dssp EEEEEEECCSSCCGGGTSCHHHHHHHHHHHHGGGSCCC--SCCSEEEEEEEEEEEEECBTTH
T ss_pred EEEEEEECCCCCccccCCCHHHHHHHHHHHHHHHhCCC--CCceEEEEEEcCCccCCCCCCH
Confidence 44444333 2234567899999999999999999864 4567789999999999999985
No 4
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.91 E-value=8.2e-23 Score=193.87 Aligned_cols=326 Identities=13% Similarity=0.089 Sum_probs=214.2
Q ss_pred cccccCCchHHHHHHHhCCCCCCCcc--cceeecCCCceecccccccCCCCCCCccccccccCCCCCHHhhhchhhHHHH
Q 018455 2 QGFWYPFRNIFSLVDELGIKPFTGWM--KSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAA 79 (355)
Q Consensus 2 H~~~~~y~~~~~l~~elGl~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~p~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 79 (355)
|.+...++++.++++++|++...... +..++..+|+... +.....+..|.+...+++.+.+++.+++ ... .
T Consensus 60 ~~~~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~~~~g~~~~---~p~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~---~ 132 (475)
T 3lov_A 60 DSYVARKHILTDLIEAIGLGEKLVRNNTSQAFILDTGGLHP---IPKGAVMGIPTDLDLFRQTTLLTEEEKQ-EVA---D 132 (475)
T ss_dssp CCEETTSTHHHHHHHHTTCGGGEEECCCCCEEEEETTEEEE---CCSSEETTEESCHHHHTTCSSSCHHHHH-HHH---H
T ss_pred hhhhcccHHHHHHHHHcCCcceEeecCCCceEEEECCEEEE---CCCcccccCcCchHHHhhccCCChhHHH-Hhh---C
Confidence 67788899999999999998543321 2122223454221 1100001123333335667778888877 222 2
Q ss_pred HhccCCChhhhhhcccccHHHHHHHhCCCHHHHHHHHHHHHHhhhCCChhhccHHHHHHHHHHHH----------HhcC-
Q 018455 80 VIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII----------LAHQ- 148 (355)
Q Consensus 80 ~~~~~~~~~~~~~~d~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~~~~~~~----------~~~~- 148 (355)
..... ........+++|+.+|++++ ++++..+.++.|++.++++.+++++|+..++..+..+. ....
T Consensus 133 ~~~~~-~~~~~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~ 210 (475)
T 3lov_A 133 LLLHP-SDSLRIPEQDIPLGEYLRPR-LGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRP 210 (475)
T ss_dssp HHHSC-CTTCCCCSSCCBHHHHHHHH-HCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC
T ss_pred cccCC-cccccCCCCCcCHHHHHHHH-hCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcc
Confidence 22111 11111246789999999996 88999999999999999999999999876655443210 0000
Q ss_pred -------------CCcceEEecCCcchHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEE
Q 018455 149 -------------KNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVL 214 (355)
Q Consensus 149 -------------~~~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~ 214 (355)
.+..+.+++||+++ ++++|++.+.+ ++|++|++|++|+.+++ .+ .|++ +| +++||+||+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~G~~~-l~~~l~~~l~~--~~i~~~~~V~~i~~~~~--~~-~v~~~~g-~~~ad~vV~ 283 (475)
T 3lov_A 211 LDQLPQTPQTTIKATGQFLSLETGLES-LIERLEEVLER--SEIRLETPLLAISREDG--RY-RLKTDHG-PEYADYVLL 283 (475)
T ss_dssp --------------CCSEEEETTCHHH-HHHHHHHHCSS--CEEESSCCCCEEEEETT--EE-EEECTTC-CEEESEEEE
T ss_pred cccccccccccccCCCcEEeeCChHHH-HHHHHHhhccC--CEEEcCCeeeEEEEeCC--EE-EEEECCC-eEECCEEEE
Confidence 12345678999998 77888776643 79999999999998874 24 5777 45 899999999
Q ss_pred ccChhhHHHhhhcccccCcHHHHhhccCCcccEEEEEEEEccCCCCCCC-CcceeccCCCc--cceeeEcccccccccCC
Q 018455 215 AVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNV-SNACSGFGDSL--AWTFFDLNKIYDEHKDD 291 (355)
Q Consensus 215 a~p~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 291 (355)
|+|++.+.+|++++++ ..+.++++.++.+++++|+++++.+.. .+.++....+. ..++|+ +...+... |
T Consensus 284 a~p~~~~~~ll~~~~~------~~~~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~-s~~~~~~~-p 355 (475)
T 3lov_A 284 TIPHPQVVQLLPDAHL------PELEQLTTHSTATVTMIFDQQQSLPIEGTGFVVNRRAPYSITACTAI-DQKWNHSA-P 355 (475)
T ss_dssp CSCHHHHHHHCTTSCC------HHHHTCCEEEEEEEEEEEECCSSCSSSSSEEEECTTSSCSEEEEEEH-HHHCTTTC-T
T ss_pred CCCHHHHHHHcCccCH------HHHhcCCCCeEEEEEEEECCcCCCCCCCEEEEecCCCCCceEEEEEE-cccCCCCC-C
Confidence 9999999999877542 356788888999999999998732111 11222222222 112233 22233332 2
Q ss_pred CceEEEEEee--CCCCCCCCCHHHHHHHHHHHHhhhcccCCCceeeeeeEEecCCCccccCCCC
Q 018455 292 SATVIQADFY--HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGS 353 (355)
Q Consensus 292 ~g~~l~~~~~--~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~v~~~~~a~~~~~pg~ 353 (355)
+..++.+.+. .+..+..++++++++.++++|+++||.. .+++...+++|++++|.+.||+
T Consensus 356 ~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~L~~~~g~~--~~p~~~~v~~w~~a~p~~~~g~ 417 (475)
T 3lov_A 356 DHTVLRAFVGRPGNDHLVHESDEVLQQAVLQDLEKICGRT--LEPKQVIISRLMDGLPAYTVGH 417 (475)
T ss_dssp TEEEEEEEECBTTBCGGGGSCHHHHHHHHHHHHHHHHSSC--CCCSEEEEEEEEEEEECCCTTH
T ss_pred CcEEEEEEeCCCCCCcccCCCHHHHHHHHHHHHHHHhCCC--CCCeEEEEEEcccCCCCCCCCh
Confidence 3344443333 2234567899999999999999999853 3577889999999999999985
No 5
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.90 E-value=7e-22 Score=187.60 Aligned_cols=319 Identities=15% Similarity=0.084 Sum_probs=207.5
Q ss_pred cccccCCchHHHHHHHhCCCCCCCcc----cceeecCCCceecccccccCCCCCCCccccccccCCCCCHHhhhchhhHH
Q 018455 2 QGFWYPFRNIFSLVDELGIKPFTGWM----KSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLM 77 (355)
Q Consensus 2 H~~~~~y~~~~~l~~elGl~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~p~p~~~~~~~~~~~l~~~~~~~~~~~~ 77 (355)
|.+...++++.++++++|++....+. ...++..+|+.+ .+| .+...+++.+.+++.++++.+.
T Consensus 70 ~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~g~~~---------~~p--~~~~~~~~~~~~~~~~~~~~~~-- 136 (478)
T 2ivd_A 70 NSFLDREPATRALAAALNLEGRIRAADPAAKRRYVYTRGRLR---------SVP--ASPPAFLASDILPLGARLRVAG-- 136 (478)
T ss_dssp CCEETTCHHHHHHHHHTTCGGGEECSCSSCCCEEEEETTEEE---------ECC--CSHHHHHTCSSSCHHHHHHHHG--
T ss_pred hhhhhhhHHHHHHHHHcCCcceeeecCccccceEEEECCEEE---------ECC--CCHHHhccCCCCCHHHHHHHhh--
Confidence 55667789999999999997432211 112222345321 122 2222234445566666665332
Q ss_pred HHHhccCCChhhhhhcccccHHHHHHHhCCCHHHHHHHHHHHHHhhhCCChhhccHHHHHHHHHHHHHh-----------
Q 018455 78 AAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILA----------- 146 (355)
Q Consensus 78 ~~~~~~~~~~~~~~~~d~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~~~~~~~~~----------- 146 (355)
...... ....+++|+.+|+++. ++++..+.++.|++.++++.+++++|+.+++..+..+...
T Consensus 137 -~~~~~~-----~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (478)
T 2ivd_A 137 -ELFSRR-----APEGVDESLAAFGRRH-LGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRA 209 (478)
T ss_dssp -GGGCCC-----CCTTCCCBHHHHHHHH-TCHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHH
T ss_pred -hhhcCC-----CCCCCCCCHHHHHHHh-hCHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHh
Confidence 222111 1136789999999997 8899999999999999999999999998776655432100
Q ss_pred ----------cCCC----cceEEecCCcchHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe----CCeEEe
Q 018455 147 ----------HQKN----FDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKETYS 208 (355)
Q Consensus 147 ----------~~~~----~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~~~~ 208 (355)
...+ ....+++||+++ ++++|++.+ |++|+++++|++|..++++ + .|++ +|++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~-l~~~l~~~l---g~~i~~~~~V~~i~~~~~~--~-~v~~~~~~~g~~~~ 282 (478)
T 2ivd_A 210 QKAQRQAALPAGTAPKLSGALSTFDGGLQV-LIDALAASL---GDAAHVGARVEGLAREDGG--W-RLIIEEHGRRAELS 282 (478)
T ss_dssp HHHHTCC----CCSCCCCCCEEEETTCTHH-HHHHHHHHH---GGGEESSEEEEEEECC--C--C-EEEEEETTEEEEEE
T ss_pred hhccccccCcccccccccccEEEECCCHHH-HHHHHHHHh---hhhEEcCCEEEEEEecCCe--E-EEEEeecCCCceEE
Confidence 0111 346778999998 778888766 6799999999999987742 4 5765 567899
Q ss_pred cCEEEEccChhhHHHhhhcccccCcHHHHhhccCCcccEEEEEEEEccCCCCC-CCCcceecc--CCCccceeeEccccc
Q 018455 209 AGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVP-NVSNACSGF--GDSLAWTFFDLNKIY 285 (355)
Q Consensus 209 ad~VV~a~p~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~ 285 (355)
||+||+|+|++.+.+|++. ++ ....+.+.++++.++.++++.+++++|.. ...+.+... +.+..+++++.+ ..
T Consensus 283 ad~vV~a~~~~~~~~ll~~--l~-~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~ 358 (478)
T 2ivd_A 283 VAQVVLAAPAHATAKLLRP--LD-DALAALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLGAIHAST-TF 358 (478)
T ss_dssp CSEEEECSCHHHHHHHHTT--TC-HHHHHHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCEEEEHHH-HC
T ss_pred cCEEEECCCHHHHHHHhhc--cC-HHHHHHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCCCCceEEEEEEcc-cC
Confidence 9999999999999998854 22 22234567888889999999999987631 112212111 112223344422 22
Q ss_pred ccccCCCceEEEEEee--CCCCCCCCCHHHHHHHHHHHHhhhcccCCCceeeeeeEEecCCCccccCCCC
Q 018455 286 DEHKDDSATVIQADFY--HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGS 353 (355)
Q Consensus 286 ~~~~~~~g~~l~~~~~--~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~v~~~~~a~~~~~pg~ 353 (355)
+...+++..++.+.+. .+..+...+++++.+.++++|++++|... .+....+++|+.+.|.+.||.
T Consensus 359 ~~~~p~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~p~~~~~~~w~~~~p~~~~g~ 426 (478)
T 2ivd_A 359 PFRAEGGRVLYSCMVGGARQPGLVEQDEDALAALAREELKALAGVTA--RPSFTRVFRWPLGIPQYNLGH 426 (478)
T ss_dssp GGGBSTTCEEEEEEEECTTCGGGGGSCHHHHHHHHHHHHHHHHCCCS--CCSEEEEEEESSCCBCCBTTH
T ss_pred CCcCCCCCEEEEEEeCCcCCccccCCCHHHHHHHHHHHHHHHhCCCC--CCcEEEEEECCCcccCCCcCH
Confidence 3222123344443333 22345567899999999999999998643 466677899999999988884
No 6
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.90 E-value=3.6e-22 Score=190.88 Aligned_cols=324 Identities=11% Similarity=0.095 Sum_probs=203.8
Q ss_pred cccccCCchHHHHHHHhCCCCCCCcc---cceeecCCCceecccccccCCCCCCCccccccccCCCCCHHhhhchhhHHH
Q 018455 2 QGFWYPFRNIFSLVDELGIKPFTGWM---KSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMA 78 (355)
Q Consensus 2 H~~~~~y~~~~~l~~elGl~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~p~p~~~~~~~~~~~l~~~~~~~~~~~~~ 78 (355)
|.+...++++.++++++|+.....+. ...++..+|+.+ .+ |.+...+++...+++.++++.+..
T Consensus 67 ~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~~~~g~~~---------~~--p~~~~~~~~~~~~~~~~~~~~~~~-- 133 (504)
T 1sez_A 67 NTMTESEGDVTFLIDSLGLREKQQFPLSQNKRYIARNGTPV---------LL--PSNPIDLIKSNFLSTGSKLQMLLE-- 133 (504)
T ss_dssp CCBCCCSHHHHHHHHHTTCGGGEECCSSCCCEEEESSSSEE---------EC--CSSHHHHHHSSSSCHHHHHHHHTH--
T ss_pred cccccCcHHHHHHHHHcCCcccceeccCCCceEEEECCeEE---------EC--CCCHHHHhccccCCHHHHHHHhHh--
Confidence 56777889999999999997543222 111222445421 11 222222344456677777664321
Q ss_pred HHhccCCChhhhhhcccccHHHHHHHhCCCHHHHHHHHHHHHHhhhCCChhhccHHHHHHHHHHHH----------H---
Q 018455 79 AVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII----------L--- 145 (355)
Q Consensus 79 ~~~~~~~~~~~~~~~d~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~~~~~~~----------~--- 145 (355)
.+.... ........+++|+.+|++++ ++++.++.+++|++.++++.+++++|+.+++..+.... +
T Consensus 134 ~~~~~~-~~~~~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~ 211 (504)
T 1sez_A 134 PILWKN-KKLSQVSDSHESVSGFFQRH-FGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSK 211 (504)
T ss_dssp HHHC-----------CCCBHHHHHHHH-HCHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHT
T ss_pred hhccCc-ccccccCCCCccHHHHHHHH-cCHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhh
Confidence 111100 00000124569999999997 88999999999999999999999999987654332210 0
Q ss_pred -hcC---------------CCcceEEecCCcchHHHHHHHHHHHHcC-cEEEcCceeeEEEecCCCCe----EEEEEe--
Q 018455 146 -AHQ---------------KNFDLVWCRGTLREKIFEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCC----ISDVVC-- 202 (355)
Q Consensus 146 -~~~---------------~~~~~~~~~gg~~~~l~~~l~~~l~~~G-~~i~l~~~V~~I~~~~~~~~----v~~v~~-- 202 (355)
... ......+++||+++ ++++|++.+ | ++|++|++|++|..+++ +. ++.|++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~-l~~~l~~~l---~~~~i~~~~~V~~I~~~~~-~~~~~~~~~v~~~~ 286 (504)
T 1sez_A 212 LSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQT-LTDAICKDL---REDELRLNSRVLELSCSCT-EDSAIDSWSIISAS 286 (504)
T ss_dssp TC----------CCCSCCSTTCSCBEETTCTHH-HHHHHHTTS---CTTTEETTCCEEEEEEECS-SSSSSCEEEEEEBC
T ss_pred hcccccccccccchhhccccCCceEeeCcHHHH-HHHHHHhhc---ccceEEcCCeEEEEEecCC-CCcccceEEEEEcC
Confidence 000 01135678999998 777777544 5 79999999999998875 21 135654
Q ss_pred -CC---eEEecCEEEEccChhhHHHhhhc---ccccCcHHHHhhccCCcccEEEEEEEEccCCCCCCC--CcceeccCC-
Q 018455 203 -GK---ETYSAGAVVLAVGISTLQELIKN---SILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNV--SNACSGFGD- 272 (355)
Q Consensus 203 -~g---~~~~ad~VV~a~p~~~~~~l~~~---~~l~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~--~~~~~~~~~- 272 (355)
+| ++++||+||+|+|+..+.+|+.. ++++ .. .+.++.+.++.++++.|++++|.... .+.++....
T Consensus 287 ~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~-~~---~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~ 362 (504)
T 1sez_A 287 PHKRQSEEESFDAVIMTAPLCDVKSMKIAKRGNPFL-LN---FIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQ 362 (504)
T ss_dssp SSSSCBCCCEESEEEECSCHHHHHTSEEESSSSBCC-CT---TSCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGG
T ss_pred CCCccceeEECCEEEECCCHHHHHHHhhcccCCccc-HH---HHhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCC
Confidence 34 57899999999999999998842 1221 11 25667778899999999988763111 122221111
Q ss_pred ----CccceeeEcccccccccCCCceEEEEEee---CCCCCCCCCHHHHHHHHHHHHhhhcccCCCceeeeeeEEecCCC
Q 018455 273 ----SLAWTFFDLNKIYDEHKDDSATVIQADFY---HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKS 345 (355)
Q Consensus 273 ----~~~~~~~~~~~~~~~~~~~~g~~l~~~~~---~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~v~~~~~a 345 (355)
....+++. +...+... |.+..+...|. .+..|..++++++++.++++|++++|.. .++....+++|+++
T Consensus 363 ~~g~~~~~~~~~-s~~~~~~~-p~g~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~--~~p~~~~~~~w~~~ 438 (504)
T 1sez_A 363 QHGLKTLGTLFS-SMMFPDRA-PNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAE--GEPTYVNHLYWSKA 438 (504)
T ss_dssp GGTCCSSEEEEH-HHHCGGGS-CTTEEEEEEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBC--SCCSSEEEEEEEEE
T ss_pred CCCCccceEEee-ccccCCcC-CCCCEEEEEEeCCCCcccccCCCHHHHHHHHHHHHHHHhCCC--CCCeEEEEeECCCC
Confidence 11112332 33334433 34443323443 2335677899999999999999999863 34677888999999
Q ss_pred ccccCCCC
Q 018455 346 LTHFFPGS 353 (355)
Q Consensus 346 ~~~~~pg~ 353 (355)
+|.+.+|+
T Consensus 439 ~p~~~~g~ 446 (504)
T 1sez_A 439 FPLYGHNY 446 (504)
T ss_dssp EECCCTTH
T ss_pred CCccCcCH
Confidence 99999884
No 7
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.88 E-value=1.7e-19 Score=168.43 Aligned_cols=298 Identities=13% Similarity=0.050 Sum_probs=189.2
Q ss_pred CCchHHHHHHHhCCCCCCCc-cc-ceeecCCCceecccccccCCCCCCCccccccccCCCCCHHhhhchhhHHHHHhccC
Q 018455 7 PFRNIFSLVDELGIKPFTGW-MK-SAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFD 84 (355)
Q Consensus 7 ~y~~~~~l~~elGl~~~~~~-~~-~~~~~~~g~~~~~~~~~~~~~~p~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 84 (355)
.++.+.++++++|+...... .. ..++ .+|+.+. + +... ..+++.++.++..........
T Consensus 61 ~~~~~~~l~~~lg~~~~~~~~~~~~~~~-~~g~~~~---~------~~~~--------~~l~~~~~~~~~~~~~~~~~~- 121 (421)
T 3nrn_A 61 EDGPLAHLLRILGAKVEIVNSNPKGKIL-WEGKIFH---Y------RESW--------KFLSVKEKAKALKLLAEIRMN- 121 (421)
T ss_dssp TSSHHHHHHHHHTCCCCEEECSSSCEEE-ETTEEEE---G------GGGG--------GGCC--------CCHHHHHTT-
T ss_pred CChHHHHHHHHhCCcceEEECCCCeEEE-ECCEEEE---c------CCch--------hhCCHhHHHHHHHHHHHHHhc-
Confidence 46789999999999743221 11 1222 2454221 1 1111 124455555543322222110
Q ss_pred CChhhhhhcccccHHHHHHHhCCCHHHHHHHHHHHHHhhhCCChhhccHHHHHHHHHHHHHhcCCCcceEEecCCcchHH
Q 018455 85 NTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKI 164 (355)
Q Consensus 85 ~~~~~~~~~d~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~~~~~~~~~~~~~~~~~~~~gg~~~~l 164 (355)
....++.|+.+|+++++++++.++.++.+++..+++.+++++|+..++..+.... ... ...+++||+++ +
T Consensus 122 -----~~~~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---g~~~~~gG~~~-l 191 (421)
T 3nrn_A 122 -----KLPKEEIPADEWIKEKIGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAAL-RWG---GPGLIRGGCKA-V 191 (421)
T ss_dssp -----CCCCCCSBHHHHHHHHTCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHH-HHC---SCEEETTCHHH-H
T ss_pred -----cCCCCCCCHHHHHHHhcCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHh-hcC---CcceecCCHHH-H
Confidence 1123458999999998777777888999999999999999999998888777642 211 24789999988 8
Q ss_pred HHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChhhHHHhhhcccccCcHHHHhhccCCc
Q 018455 165 FEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLAS 244 (355)
Q Consensus 165 ~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~~~~l~~~~~l~~~~~~~~~~~l~~ 244 (355)
+++|++.++++|++|++|++|++|..++ +++ |+++|++++||.||+|+|++.+.+|++.+.++ ....+.+.++.+
T Consensus 192 ~~~l~~~~~~~G~~i~~~~~V~~i~~~~--~~v--V~~~g~~~~ad~Vv~a~~~~~~~~ll~~~~~~-~~~~~~~~~~~~ 266 (421)
T 3nrn_A 192 IDELERIIMENKGKILTRKEVVEINIEE--KKV--YTRDNEEYSFDVAISNVGVRETVKLIGRDYFD-RDYLKQVDSIEP 266 (421)
T ss_dssp HHHHHHHHHTTTCEEESSCCEEEEETTT--TEE--EETTCCEEECSEEEECSCHHHHHHHHCGGGSC-HHHHHHHHTCCC
T ss_pred HHHHHHHHHHCCCEEEcCCeEEEEEEEC--CEE--EEeCCcEEEeCEEEECCCHHHHHHhcCcccCC-HHHHHHHhCCCC
Confidence 8999999999999999999999999876 335 66688899999999999999999998743332 233346677887
Q ss_pred ccEEEEEEEEccCCCCCCCCcceeccCCCccceeeEcccccccccCCCceEEEEEeeCCCCCCCCCHHHHHHHHHHHHhh
Q 018455 245 IDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSK 324 (355)
Q Consensus 245 ~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~ee~~~~~~~~l~~ 324 (355)
.++++++++++++.. ..++++++.+..+.. +...+...|..++++++++.+.+.-. ..+.++..+.++++|++
T Consensus 267 ~~~~~v~l~~~~~~~--~~~~~~~~~~~~~~~-i~~~s~~~p~~ap~G~~~~~~~~~~~----~~~~~~~~~~~~~~L~~ 339 (421)
T 3nrn_A 267 SEGIKFNLAVPGEPR--IGNTIVFTPGLMING-FNEPSALDKSLAREGYTLIMAHMALK----NGNVKKAIEKGWEELLE 339 (421)
T ss_dssp CCEEEEEEEEESSCS--SCSSEEECTTSSSCE-EECGGGTCGGGSCTTEEEEEEEEECT----TCCHHHHHHHHHHHHHH
T ss_pred CceEEEEEEEcCCcc--cCCeEEEcCCcceee-EeccCCCCCCcCCCCceEEEEEEeec----cccHHHHHHHHHHHHHH
Confidence 788999999998854 134555554432322 23334455555433344544433211 22344558999999999
Q ss_pred hcccCCCceeeeeeEEecCCCccccC
Q 018455 325 CIKDFSTATVMDHKIRRFPKSLTHFF 350 (355)
Q Consensus 325 ~~p~~~~~~~~~~~v~~~~~a~~~~~ 350 (355)
++| ..++ ..+.+|+.++|.+.
T Consensus 340 ~~p---~~~~--~~~~~~~~~~p~~~ 360 (421)
T 3nrn_A 340 IFP---EGEP--LLAQVYRDGNPVNR 360 (421)
T ss_dssp HCT---TCEE--EEEEEC--------
T ss_pred HcC---CCeE--EEeeeccCCCCccc
Confidence 999 2444 35677888888873
No 8
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.86 E-value=3.6e-20 Score=177.61 Aligned_cols=237 Identities=16% Similarity=0.129 Sum_probs=164.1
Q ss_pred hcccccHHHHHHHhCCCHHHHHHHHHHHHHhhhCCChhhccHHHHHHHHHHH-----HHhcCCCcceEEecCCcchHHHH
Q 018455 92 KYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFI-----ILAHQKNFDLVWCRGTLREKIFE 166 (355)
Q Consensus 92 ~~d~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~~~~~~-----~~~~~~~~~~~~~~gg~~~~l~~ 166 (355)
.++++|+.+|+++++.++.+ +.++++++.+.++.+++++|+.+++.++... +.....+....+++||+++ +++
T Consensus 142 ~~~~~s~~~~l~~~~~~~~~-~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG~~~-l~~ 219 (520)
T 1s3e_A 142 EWDNMTMKELLDKLCWTESA-KQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQ-VSE 219 (520)
T ss_dssp HHHTSBHHHHHHHHCSSHHH-HHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCTHH-HHH
T ss_pred hhhccCHHHHHHhhCCCHHH-HHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCCHHH-HHH
Confidence 46789999999998776654 7789999999999999999999887665431 0111122344678999998 778
Q ss_pred HHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhhHHHhhhcccccCcHHHHhhccCCcc
Q 018455 167 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASI 245 (355)
Q Consensus 167 ~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~~~~l~~~~~l~~~~~~~~~~~l~~~ 245 (355)
++++.+ |++|++|++|++|..+++ ++. |++ +|++++||+||+|+|+..+.+|++++.++. ...+.++++++.
T Consensus 220 ~l~~~l---g~~i~~~~~V~~i~~~~~--~v~-v~~~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp~-~~~~~i~~~~~~ 292 (520)
T 1s3e_A 220 RIMDLL---GDRVKLERPVIYIDQTRE--NVL-VETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPM-MRNQMITRVPLG 292 (520)
T ss_dssp HHHHHH---GGGEESSCCEEEEECSSS--SEE-EEETTSCEEEESEEEECSCGGGGGGSEEESCCCH-HHHHHTTSCCBC
T ss_pred HHHHHc---CCcEEcCCeeEEEEECCC--eEE-EEECCCeEEEeCEEEECCCHHHHcceeeCCCCCH-HHHHHHHhCCCc
Confidence 787655 789999999999998774 364 666 678999999999999999988887665532 223356788888
Q ss_pred cEEEEEEEEccCCCCCCCC-ccee--ccCCCccceeeEcccccccccCCCceEEEEEee--CCCCCCCCCHHHHHHHHHH
Q 018455 246 DVVSVKLWFDKKVTVPNVS-NACS--GFGDSLAWTFFDLNKIYDEHKDDSATVIQADFY--HANELMPLKDDQVVAKAVS 320 (355)
Q Consensus 246 ~~~~v~l~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~--~~~~~~~~~~ee~~~~~~~ 320 (355)
++.++++.|++++|..... +..+ ..+.++.+ +++.+.. + ++..++...+. .+..|..++++++++.+++
T Consensus 293 ~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~-~~d~~~~-~----~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~ 366 (520)
T 1s3e_A 293 SVIKCIVYYKEPFWRKKDYCGTMIIDGEEAPVAY-TLDDTKP-E----GNYAAIMGFILAHKARKLARLTKEERLKKLCE 366 (520)
T ss_dssp CEEEEEEECSSCGGGGGTEEEEEEECSTTCSCSE-EEECCCT-T----SCSCEEEEEEETHHHHHHTTSCHHHHHHHHHH
T ss_pred ceEEEEEEeCCCcccCCCCCceeeccCCCCceEE-EeeCCCC-C----CCCCEEEEEccchhhhhhhcCCHHHHHHHHHH
Confidence 9999999999998731111 1111 11233433 4553321 1 11234332222 2346778899999999999
Q ss_pred HHhhhcccCCCceeeeeeEEecC
Q 018455 321 YLSKCIKDFSTATVMDHKIRRFP 343 (355)
Q Consensus 321 ~l~~~~p~~~~~~~~~~~v~~~~ 343 (355)
+|+++||......+..+.+++|.
T Consensus 367 ~L~~~~~~~~~~~p~~~~~~~W~ 389 (520)
T 1s3e_A 367 LYAKVLGSLEALEPVHYEEKNWC 389 (520)
T ss_dssp HHHHHHTCGGGGCCSEEEEEEGG
T ss_pred HHHHHhCccccCCccEEEEEeeC
Confidence 99999975312345556666664
No 9
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.85 E-value=4.1e-20 Score=175.23 Aligned_cols=317 Identities=11% Similarity=0.017 Sum_probs=197.6
Q ss_pred cccccCCchHHHHHHHhCCCCCCCcccceeecCCCceecccccccCCCCCCCccccccccCCCCCHHhhhchhhHHHHHh
Q 018455 2 QGFWYPFRNIFSLVDELGIKPFTGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVI 81 (355)
Q Consensus 2 H~~~~~y~~~~~l~~elGl~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 81 (355)
|.++..++.+.+|+++++ +.............+|+.+ ++ |++... ..++..++++.+. .++
T Consensus 65 ~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~g~~~---------~~--P~~~~~----~~l~~~~~~~~~~---~ll 125 (484)
T 4dsg_A 65 HVIFSHYQYFDDVMDWAV-QGWNVLQRESWVWVRGRWV---------PY--PFQNNI----HRLPEQDRKRCLD---ELV 125 (484)
T ss_dssp CCBCCSBHHHHHHHHHHC-SCEEEEECCCEEEETTEEE---------ES--SGGGCG----GGSCHHHHHHHHH---HHH
T ss_pred cccccChHHHHHHHHHHh-hhhhhccCceEEEECCEEE---------Ee--Cccchh----hhCCHHHHHHHHH---HHH
Confidence 677889999999999986 3322111111211345421 12 221110 1244455544322 221
Q ss_pred ccCCChhhhhhcccccHHHHHHHhCCCHHHHHHHHHHHHHhhhCCChhhccHHHHH---------HHHHHHHHhcCC---
Q 018455 82 DFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATL---------GILYFIILAHQK--- 149 (355)
Q Consensus 82 ~~~~~~~~~~~~d~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~---------~~~~~~~~~~~~--- 149 (355)
+.. ......+++|+.+|+.++ +++++++.++.|++.++|+.+++++|+.+++ ..++..+ ....
T Consensus 126 ~~~---~~~~~~~~~s~~e~~~~~-~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~-~~~~~~~ 200 (484)
T 4dsg_A 126 RSH---ARTYTEPPNNFEESFTRQ-FGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQ-ENRDDLG 200 (484)
T ss_dssp HHH---HCCCSSCCSSHHHHHHHH-HHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHH-HTCCCCC
T ss_pred HHH---hccCCCCCCCHHHHHHHH-hHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHh-hcccccC
Confidence 100 001125678999999998 8999999999999999999999999986532 2233322 2111
Q ss_pred ---CcceEEec-CCcchHHHHHHHHHHHHcCcEEEcC--ceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChhhHHH
Q 018455 150 ---NFDLVWCR-GTLREKIFEPWMDSMRTRGCEFLDG--RRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQE 223 (355)
Q Consensus 150 ---~~~~~~~~-gg~~~~l~~~l~~~l~~~G~~i~l~--~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~~~~ 223 (355)
...+.|+. ||+++ ++++|++.+.+ .+|+++ ++|++|..+++ ++ ...+|+++.||+||+|+|++.+.+
T Consensus 201 ~~~~~~f~yp~~gG~~~-l~~~la~~l~~--~~i~~~~~~~V~~I~~~~~--~v--~~~~G~~~~ad~VI~a~p~~~~~~ 273 (484)
T 4dsg_A 201 WGPNATFRFPQRGGTGI-IYQAIKEKLPS--EKLTFNSGFQAIAIDADAK--TI--TFSNGEVVSYDYLISTVPFDNLLR 273 (484)
T ss_dssp CSTTSEEEEESSSCTHH-HHHHHHHHSCG--GGEEECGGGCEEEEETTTT--EE--EETTSCEEECSEEEECSCHHHHHH
T ss_pred CCccceEEeecCCCHHH-HHHHHHhhhhh--CeEEECCCceeEEEEecCC--EE--EECCCCEEECCEEEECCCHHHHHH
Confidence 12345664 89998 77888877743 289999 56999998763 23 124678899999999999999999
Q ss_pred hhhc--ccccCcHHHHhhccCCcccEEEEEEEEccCCCCC-CCCcceeccC--CCccceeeEcccccccccCCCceEEEE
Q 018455 224 LIKN--SILCNREEFLKVLNLASIDVVSVKLWFDKKVTVP-NVSNACSGFG--DSLAWTFFDLNKIYDEHKDDSATVIQA 298 (355)
Q Consensus 224 l~~~--~~l~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~l~~ 298 (355)
++.+ +.++ ....+.+..+++.++.++++.++++.... .+...++-.+ .++.. +...++.+|...+++.+.+.+
T Consensus 274 ll~~~~~~~~-~~~~~~l~~l~y~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~~~~r-i~~~s~~~p~~ap~g~~~l~~ 351 (484)
T 4dsg_A 274 MTKGTGFKGY-DEWPAIADKMVYSSTNVIGIGVKGTPPPHLKTACWLYFPEDTSPFYR-ATVFSNYSKYNVPEGHWSLML 351 (484)
T ss_dssp HEECSSCTTG-GGHHHHHHHCCEEEEEEEEEEEESCCCGGGTTCCEEECCSTTCSCSE-EECGGGTCGGGSCTTEEEEEE
T ss_pred HhhccCCCCC-HHHHHHHhCCCcCceEEEEEEEcCCCcccCCCCeEEEEEcCCCeEEE-EEeecCCCcccCCCCeEEEEE
Confidence 9864 1121 22223567888999999999999874210 1112222222 22322 222344445443233344433
Q ss_pred EeeCCCCCCCCCHHHHHHHHHHHHhhhcccCCC-ceeeeeeEEecCCCccccCCCC
Q 018455 299 DFYHANELMPLKDDQVVAKAVSYLSKCIKDFST-ATVMDHKIRRFPKSLTHFFPGS 353 (355)
Q Consensus 299 ~~~~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~-~~~~~~~v~~~~~a~~~~~pg~ 353 (355)
-+... +.+..+++++++.++++|.++.. +.. ..+...+++||+.+.|.+.+|+
T Consensus 352 e~~~~-~~~~~~d~~l~~~a~~~L~~~~~-~~~~~~~~~~~v~r~~~~yP~y~~~~ 405 (484)
T 4dsg_A 352 EVSES-KYKPVNHSTLIEDCIVGCLASNL-LLPEDLLVSKWHYRIEKGYPTPFIGR 405 (484)
T ss_dssp EEEEB-TTBCCCTTSHHHHHHHHHHHTTS-CCTTCCEEEEEEEEEEEEEECCBTTH
T ss_pred EEecC-cCCcCCHHHHHHHHHHHHHHcCC-CCccceEEEEEEEEeCccccCCCccH
Confidence 33322 44577999999999999999853 332 3456678999999999999985
No 10
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.85 E-value=1e-19 Score=174.15 Aligned_cols=319 Identities=13% Similarity=0.062 Sum_probs=199.5
Q ss_pred cccccCCchHHHHHHHhCCCCCCC-c-cc-ceeecCCCceecccccccCCCCCCCccccccccCCCCCHHhhhchhh-HH
Q 018455 2 QGFWYPFRNIFSLVDELGIKPFTG-W-MK-SAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLP-LM 77 (355)
Q Consensus 2 H~~~~~y~~~~~l~~elGl~~~~~-~-~~-~~~~~~~g~~~~~~~~~~~~~~p~p~~~~~~~~~~~l~~~~~~~~~~-~~ 77 (355)
|.|+..++++.+|++++|...... . .. ..++ .+|+.+ +.|+.... ..++..+..+... ++
T Consensus 66 h~~~~~~~~v~~l~~e~~~~~~~~~~~~~~~~i~-~~g~~~-----------~~p~~~~~----~~~~~~~~~~~~~~~~ 129 (513)
T 4gde_A 66 HVIFSHYKYFDDCLDEALPKEDDWYTHQRISYVR-CQGQWV-----------PYPFQNNI----SMLPKEEQVKCIDGMI 129 (513)
T ss_dssp CCCCCCBHHHHHHHHHHSCSGGGEEEEECCEEEE-ETTEEE-----------ESSGGGGG----GGSCHHHHHHHHHHHH
T ss_pred eEecCCCHHHHHHHHHhCCccceeEEecCceEEE-ECCeEe-----------ecchhhhh----hhcchhhHHHHHHHHH
Confidence 889999999999999998864321 1 11 2222 345421 12222111 1123333333221 11
Q ss_pred HHHhccCCChhhhhhcccccHHHHHHHhCCCHHHHHHHHHHHHHhhhCCChhhccHHHHHHHH---------HHHHHhcC
Q 018455 78 AAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGIL---------YFIILAHQ 148 (355)
Q Consensus 78 ~~~~~~~~~~~~~~~~d~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~~~---------~~~~~~~~ 148 (355)
..... ......+..|+.+|+.+. +++++.+.++.|++.++++.+++++|+.++...+ ...+....
T Consensus 130 ~~~~~-----~~~~~~~~~s~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (513)
T 4gde_A 130 DAALE-----ARVANTKPKTFDEWIVRM-MGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKT 203 (513)
T ss_dssp HHHHH-----HHTCCSCCCSHHHHHHHH-HHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCC
T ss_pred HHHHh-----hhcccccccCHHHHHHHh-hhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhccc
Confidence 11111 111234568999999987 8899999999999999999999999986543211 11111111
Q ss_pred C-----CcceEE-ecCCcchHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChhhHH
Q 018455 149 K-----NFDLVW-CRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQ 222 (355)
Q Consensus 149 ~-----~~~~~~-~~gg~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~~~ 222 (355)
. .....+ ++||+++ ++++|++.|.+.|++|++|++|++|..++ +++ +..+|+++.||+||+|+|++.+.
T Consensus 204 ~~~~~~~~~~~~~~~gG~~~-l~~~l~~~l~~~g~~i~~~~~V~~I~~~~--~~v--~~~~G~~~~ad~vI~t~P~~~l~ 278 (513)
T 4gde_A 204 AGNWGPNATFRFPARGGTGG-IWIAVANTLPKEKTRFGEKGKVTKVNANN--KTV--TLQDGTTIGYKKLVSTMAVDFLA 278 (513)
T ss_dssp CCSCBTTBEEEEESSSHHHH-HHHHHHHTSCGGGEEESGGGCEEEEETTT--TEE--EETTSCEEEEEEEEECSCHHHHH
T ss_pred ccccccccceeecccCCHHH-HHHHHHHHHHhcCeeeecceEEEEEEccC--CEE--EEcCCCEEECCEEEECCCHHHHH
Confidence 1 112233 4799999 88999999999999999999999999876 322 33488999999999999999999
Q ss_pred HhhhcccccCcHHHHhhccCCcccEEEEEEEEccCCCCC-CCCcceeccCC--CccceeeEcccccccccC---------
Q 018455 223 ELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVP-NVSNACSGFGD--SLAWTFFDLNKIYDEHKD--------- 290 (355)
Q Consensus 223 ~l~~~~~l~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--------- 290 (355)
+++..+.. ......+++.++..+.+.++...... .....++..+. ++.. +...++..|...+
T Consensus 279 ~~l~~~~~-----~~~~~~l~y~~~~~v~l~~~~~~~~~~~~~~~~y~~~~~~~f~R-i~~~~n~sp~~~p~~~~~~~~~ 352 (513)
T 4gde_A 279 EAMNDQEL-----VGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYR-ATIFSNYSPYNQPEASAALPTM 352 (513)
T ss_dssp HHTTCHHH-----HHHHTTCCEEEEEEEEEEEESSCCTTTTTCCEEECCSTTCSCSE-EECGGGTCGGGSCCTTCCEECC
T ss_pred HhcCchhh-----HhhhhcccCCceEEEEEEEeccccccccccceeeccCCCCceeE-EEecCCCCcccCCCCCceEEEE
Confidence 98875421 12446788888888999987653311 11111111111 1111 1111111111110
Q ss_pred ------------CCceEEEEEee--CCCCCCCCCHHHHHHHHHHHHhhhcccCCCceeeeeeEEecCCCccccCCCC
Q 018455 291 ------------DSATVIQADFY--HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGS 353 (355)
Q Consensus 291 ------------~~g~~l~~~~~--~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~v~~~~~a~~~~~pg~ 353 (355)
+....+.+.+. ..++...+++|++++.++++|.++.+....++++..+++|||+|.|+|..|+
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~de~l~~~~~~~L~~~~~i~~~~~i~~~~v~r~~~ayP~y~~~~ 429 (513)
T 4gde_A 353 QLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLER 429 (513)
T ss_dssp EETTSCCCSCCSEECCCEEEEEEEEEEBTTBCCCTTTHHHHHHHHHHHTTSSCTTCEEEEEEEEEEEEEEECCBTTH
T ss_pred EeccCCCcccccCCcceEEEEEecccchhccCCCHHHHHHHHHHHHHHhcCCCCccceEEEEEEECCCeecccCHhH
Confidence 01111111111 2345667899999999999999998765567899999999999999999885
No 11
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.83 E-value=1.5e-19 Score=170.40 Aligned_cols=237 Identities=13% Similarity=0.113 Sum_probs=160.9
Q ss_pred hhcccccHHHHHHHhCCCHHHHHHHHHHHHHhhhCCChh-hccHHHHHHHHHHHH-----HhcCCCcceEEecCCcchHH
Q 018455 91 RKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAE-QCSAAATLGILYFII-----LAHQKNFDLVWCRGTLREKI 164 (355)
Q Consensus 91 ~~~d~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Sa~~~~~~~~~~~-----~~~~~~~~~~~~~gg~~~~l 164 (355)
..++++|+.+|+++++.++.+ +.++++++.+.++.+++ ++|+.+++..+.... .. ..+....+++||+++ +
T Consensus 141 ~~~~~~s~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~gG~~~-l 217 (453)
T 2yg5_A 141 RDLDTVSFKQWLINQSDDAEA-RDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVD-EDFILDKRVIGGMQQ-V 217 (453)
T ss_dssp HHHHSSBHHHHHHHHCSCHHH-HHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHC-HHHHTCEEETTCTHH-H
T ss_pred hhhhhccHHHHHHhhcCCHHH-HHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhcc-CCCcceEEEcCChHH-H
Confidence 346789999999998776664 56889998888999999 999998876654310 00 001124678999998 7
Q ss_pred HHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChhhHHHhhhcccccCcHHHHhhccCCc
Q 018455 165 FEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLAS 244 (355)
Q Consensus 165 ~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~~~~l~~~~~l~~~~~~~~~~~l~~ 244 (355)
++.+++.+ |++|++|++|++|..++ ++.+.|+++|++++||+||+|+|+..+.+|++.+.++. ...+.++++++
T Consensus 218 ~~~l~~~l---g~~i~~~~~V~~i~~~~--~~~v~v~~~~~~~~ad~VI~a~p~~~~~~l~~~p~lp~-~~~~~i~~~~~ 291 (453)
T 2yg5_A 218 SIRMAEAL---GDDVFLNAPVRTVKWNE--SGATVLADGDIRVEASRVILAVPPNLYSRISYDPPLPR-RQHQMHQHQSL 291 (453)
T ss_dssp HHHHHHHH---GGGEECSCCEEEEEEET--TEEEEEETTTEEEEEEEEEECSCGGGGGGSEEESCCCH-HHHHHGGGEEE
T ss_pred HHHHHHhc---CCcEEcCCceEEEEEeC--CceEEEEECCeEEEcCEEEEcCCHHHHhcCEeCCCCCH-HHHHHHhcCCC
Confidence 78787655 78999999999999876 33134777888999999999999999988877665532 22235677778
Q ss_pred ccEEEEEEEEccCCCCCCC-CcceeccCCCccceeeEcccccccccCCCceEEEEEee--CCCCCCCCCHHHHHHHHHHH
Q 018455 245 IDVVSVKLWFDKKVTVPNV-SNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFY--HANELMPLKDDQVVAKAVSY 321 (355)
Q Consensus 245 ~~~~~v~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~--~~~~~~~~~~ee~~~~~~~~ 321 (355)
.++.++++.|++++|.... .+..+..+.++.+ +++.+. ++ +...++.+.+. .++.|..++++++++.++++
T Consensus 292 ~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~-~~~~~~--~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 365 (453)
T 2yg5_A 292 GLVIKVHAVYETPFWREDGLSGTGFGASEVVQE-VYDNTN--HE---DDRGTLVAFVSDEKADAMFELSAEERKATILAS 365 (453)
T ss_dssp CCEEEEEEEESSCGGGGGTEEEEEECTTSSSCE-EEECCC--TT---CSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHH
T ss_pred cceEEEEEEECCCCCCCCCCCceeecCCCCeEE-EEeCCC--CC---CCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHH
Confidence 8899999999999873111 1111222334433 455331 21 11233332222 23456677899999999999
Q ss_pred HhhhcccCCCceeeeeeEEecC
Q 018455 322 LSKCIKDFSTATVMDHKIRRFP 343 (355)
Q Consensus 322 l~~~~p~~~~~~~~~~~v~~~~ 343 (355)
|+++||.. ...++.+.+.+|.
T Consensus 366 L~~~~~~~-~~~p~~~~~~~W~ 386 (453)
T 2yg5_A 366 LARYLGPK-AEEPVVYYESDWG 386 (453)
T ss_dssp HHHHHCGG-GGCCSEEEECCTT
T ss_pred HHHHhCcc-CCCccEEEEeecC
Confidence 99999752 1244555566664
No 12
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.77 E-value=2.5e-17 Score=156.87 Aligned_cols=243 Identities=13% Similarity=0.093 Sum_probs=167.2
Q ss_pred hhhcccccHHHHHHHhC--CCHHHHHHHHHHHHHhhhCCChhhccHHHHHHHHHHHHHhcC-----CCcceEEecCCcch
Q 018455 90 WRKYDSITARELFKQFG--CSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQ-----KNFDLVWCRGTLRE 162 (355)
Q Consensus 90 ~~~~d~~s~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~~~~~~~~~~~-----~~~~~~~~~gg~~~ 162 (355)
+..++++|+.+|+++.+ +++.. +.++++++...++.+++++|+..++..+... .+. .......++||+++
T Consensus 180 ~~~~~~~s~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~--~~~~~~~~~~~~~~~~~gG~~~ 256 (495)
T 2vvm_A 180 FRKYDEMSYSERIDQIRDELSLNE-RSSLEAFILLCSGGTLENSSFGEFLHWWAMS--GYTYQGCMDCLMSYKFKDGQSA 256 (495)
T ss_dssp HHHHHTSBHHHHHHHHGGGCCHHH-HHHHHHHHHHHHSSCTTTSBHHHHHHHHHHT--TSSHHHHHHHHHSEEETTCHHH
T ss_pred hhhhhhhhHHHHHHHhhccCCHHH-HHHHHHHHHHhcCCCcchhhHHHHHHHHHHc--CCCHHHHHhhhceEEeCCCHHH
Confidence 34578899999999987 77775 5789999999999999999999887765431 000 01124567899998
Q ss_pred HHHHHHHHHHHHcC-cEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhhHHHhhhcccccCcHHHHhhc
Q 018455 163 KIFEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVL 240 (355)
Q Consensus 163 ~l~~~l~~~l~~~G-~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~~~~l~~~~~l~~~~~~~~~~ 240 (355)
+++.|.+.+.+.| ++|+++++|++|+.++++ + .|++ +|++++||+||+|+|+..+.+|.+.+.++. ...+.++
T Consensus 257 -l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~--v-~v~~~~g~~~~ad~vI~a~~~~~l~~i~~~p~lp~-~~~~ai~ 331 (495)
T 2vvm_A 257 -FARRFWEEAAGTGRLGYVFGCPVRSVVNERDA--A-RVTARDGREFVAKRVVCTIPLNVLSTIQFSPALST-ERISAMQ 331 (495)
T ss_dssp -HHHHHHHHHHTTTCEEEESSCCEEEEEECSSS--E-EEEETTCCEEEEEEEEECCCGGGGGGSEEESCCCH-HHHHHHH
T ss_pred -HHHHHHHHhhhcCceEEEeCCEEEEEEEcCCE--E-EEEECCCCEEEcCEEEECCCHHHHhheeeCCCCCH-HHHHHHH
Confidence 8899999999888 999999999999987743 5 4766 567899999999999999998876665532 2233567
Q ss_pred cCCcccEEEEEEEEccCCCCCCCCcceeccCCCccceeeEcccccccccCCCceEEEEEeeCCCCCCCCCHHHHHHHHHH
Q 018455 241 NLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVS 320 (355)
Q Consensus 241 ~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~ee~~~~~~~ 320 (355)
.+.+.++.++++.|++++|. . ...+...+.++.+ +++.+.. + ++..++.+ |..... .+++++..+.+++
T Consensus 332 ~~~~~~~~kv~l~~~~~~~~-~-~~g~~~~~~~~~~-~~~~~~~-~----~~~~vl~~-~~~~~~--~~~~~e~~~~~~~ 400 (495)
T 2vvm_A 332 AGHVSMCTKVHAEVDNKDMR-S-WTGIAYPFNKLCY-AIGDGTT-P----AGNTHLVC-FGNSAN--HIQPDEDVRETLK 400 (495)
T ss_dssp HCCCCCCEEEEEEESCGGGG-G-EEEEECSSCSSCE-EEEEEEC-T----TSCEEEEE-EECSTT--CCCTTTCHHHHHH
T ss_pred hcCCCceeEEEEEECCccCC-C-ceeEecCCCCcEE-EecCCCC-C----CCCeEEEE-EeCccc--cCCCHHHHHHHHH
Confidence 77888899999999998762 2 1111112334443 3432211 1 12234433 443222 2456667788999
Q ss_pred HHhhhcccCCCceeeeeeEEec---CC---CccccCCCC
Q 018455 321 YLSKCIKDFSTATVMDHKIRRF---PK---SLTHFFPGS 353 (355)
Q Consensus 321 ~l~~~~p~~~~~~~~~~~v~~~---~~---a~~~~~pg~ 353 (355)
+|++++|.. .++....+++| |+ +.+.+.||.
T Consensus 401 ~L~~~~~~~--~~~~~~~~~~W~~dp~~~g~y~~~~~g~ 437 (495)
T 2vvm_A 401 AVGQLAPGT--FGVKRLVFHNWVKDEFAKGAWFFSRPGM 437 (495)
T ss_dssp HHHTTSTTS--CCEEEEEECCTTTCTTTSSSSCCCCTTH
T ss_pred HHHHhcCCC--CCceEEEEeEcCCCCCCCCCccCcCCCc
Confidence 999999863 34556666666 33 444455663
No 13
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.69 E-value=3.8e-16 Score=145.84 Aligned_cols=210 Identities=14% Similarity=0.171 Sum_probs=144.1
Q ss_pred cccccCCchHHHHHHHhCCCCCCCccc-ceeecCC-Cc---eecccccccCCCCCCCccccccccCCCCCHHhhhchhhH
Q 018455 2 QGFWYPFRNIFSLVDELGIKPFTGWMK-SAQYSEE-GL---EVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPL 76 (355)
Q Consensus 2 H~~~~~y~~~~~l~~elGl~~~~~~~~-~~~~~~~-g~---~~~~~~~~~~~~~p~p~~~~~~~~~~~l~~~~~~~~~~~ 76 (355)
|.++.++.+++++|.++|+.....|.. ...|... +. ......+ .+.|.+...+++.+.+++.+|.++.++
T Consensus 93 P~~l~~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~-----~~VPss~~e~~~~~lLs~~eK~~l~kF 167 (475)
T 3p1w_A 93 PKFILVGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFI-----HKVPATDMEALVSPLLSLMEKNRCKNF 167 (475)
T ss_dssp CCBEETTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEE-----EECCCSHHHHHTCTTSCHHHHHHHHHH
T ss_pred CeEeecCcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCce-----EeCCCCHHHHhhccCCCHHHHHHHHHH
Confidence 567889999999999999998777763 2333211 10 0000011 123445444668899999999998887
Q ss_pred HHHHhccCCC-hhhhh--hcccccHHHHHHHhCCCHHHHHHHHHHHHHhhhCCChhhccHHHHHHHHHHHH--HhcCCCc
Q 018455 77 MAAVIDFDNT-DVAWR--KYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII--LAHQKNF 151 (355)
Q Consensus 77 ~~~~~~~~~~-~~~~~--~~d~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~~~~~~~--~~~~~~~ 151 (355)
+..+.++... ...+. ++++.|+.+|++++++++.+++.++.++... ...+..+.|+..++..+..+. +...+++
T Consensus 168 L~~l~~~~~~~~~~~~~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~-~~~~~~~~~a~~~l~ri~~y~~Sl~~yg~s 246 (475)
T 3p1w_A 168 YQYVSEWDANKRNTWDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALY-LNDDYLKQPAYLTLERIKLYMQSISAFGKS 246 (475)
T ss_dssp HHHHHHCCTTCGGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCC-SSSGGGGSBHHHHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHhhhhccchhhhcccccCCCHHHHHHHcCCCHHHHHHHHHHHHhh-cCCCcccCCHHHHHHHHHHHHHHHhhcCCC
Confidence 7776654311 11222 2468999999999999999887544443222 223455678877776655442 1222346
Q ss_pred ceEEecCCcchHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 152 DLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 152 ~~~~~~gg~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
.+.|++||+++ +++++++.+++.|++|+++++|++|..+++ |++++|++ +|++++||.||+|....
T Consensus 247 ~~~yp~gG~~~-L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~-g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 247 PFIYPLYGLGG-IPEGFSRMCAINGGTFMLNKNVVDFVFDDD-NKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp SEEEETTCTTH-HHHHHHHHHHHC--CEESSCCEEEEEECTT-SCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred ceEEECCCHHH-HHHHHHHHHHHcCCEEEeCCeEEEEEEecC-CeEEEEEECCCcEEECCEEEECCCcc
Confidence 78899999998 889999999999999999999999998333 56888988 56789999999998654
No 14
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.66 E-value=2.6e-15 Score=136.07 Aligned_cols=185 Identities=10% Similarity=0.118 Sum_probs=126.5
Q ss_pred EEecCCcchHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhhHHHhhhcc--cc
Q 018455 154 VWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELIKNS--IL 230 (355)
Q Consensus 154 ~~~~gg~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~~~~l~~~~--~l 230 (355)
....+|+++ +.+.+++.+ |++|+++++|++|+.++++ + .|++ +|++++||.||+|+|++.+.+|+.+. .+
T Consensus 105 ~~~~~g~~~-l~~~l~~~~---g~~i~~~~~V~~i~~~~~~--~-~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l 177 (342)
T 3qj4_A 105 FVAPQGISS-IIKHYLKES---GAEVYFRHRVTQINLRDDK--W-EVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLI 177 (342)
T ss_dssp EECTTCTTH-HHHHHHHHH---TCEEESSCCEEEEEECSSS--E-EEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHS
T ss_pred eecCCCHHH-HHHHHHHhc---CCEEEeCCEEEEEEEcCCE--E-EEEECCCCEEEcCEEEECCCHHHHHHHhccccccc
Confidence 345788888 666666554 8999999999999998753 4 5766 56778999999999999999988642 22
Q ss_pred cCcHHHHhhccCCcccEEEEEEEEccCCCCCCCCccee-ccCCCccceeeEccccccccc-CCCceEEEEEee--CCCCC
Q 018455 231 CNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACS-GFGDSLAWTFFDLNKIYDEHK-DDSATVIQADFY--HANEL 306 (355)
Q Consensus 231 ~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~g~~l~~~~~--~~~~~ 306 (355)
+ ....+.+..+++.++.++++.|+++++...+...++ ..+..++|++++ +.. +... .+++..+.+... .++++
T Consensus 178 ~-~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~k-~~r~~~~~~~~~v~~~~~~~~~~~ 254 (342)
T 3qj4_A 178 S-ECQRQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSID-NKK-RNIESSEIGPSLVIHTTVPFGVTY 254 (342)
T ss_dssp C-HHHHHHHHTCCBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEH-HHH-TTCCCC-CCCEEEEEECHHHHHHT
T ss_pred C-HHHHHHHhcCCccccEEEEEEECCCCccCCceeeEEccCCcceEEEEcc-ccC-CCCCCCCCCceEEEECCHHHHHHh
Confidence 2 122346788999999999999998755322222222 222335664343 332 3211 123333322222 22456
Q ss_pred CCCCHHHHHHHHHHHHhhhcccCCCceeeeeeEEecCCCccccC
Q 018455 307 MPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFF 350 (355)
Q Consensus 307 ~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~v~~~~~a~~~~~ 350 (355)
.+++++++++.++++|++++|.. .+++++.++||++|+|++.
T Consensus 255 ~~~~~~~~~~~~~~~l~~~~g~~--~~p~~~~v~rW~~a~p~~~ 296 (342)
T 3qj4_A 255 LEHSIEDVQELVFQQLENILPGL--PQPIATKCQKWRHSQVTNA 296 (342)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCSC--CCCSEEEEEEETTCSBSSC
T ss_pred hcCCHHHHHHHHHHHHHHhccCC--CCCceeeeccccccccccc
Confidence 78899999999999999999854 3568899999999999883
No 15
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.64 E-value=2.1e-14 Score=136.86 Aligned_cols=229 Identities=11% Similarity=0.069 Sum_probs=124.9
Q ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHhhhCCChhhccHHHHHHHHHHHHHhcCCCcceEEecCCcchHHHHHHHHHHHHc
Q 018455 96 ITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTR 175 (355)
Q Consensus 96 ~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~~~~~~~~~~~~~~~~~~~~gg~~~~l~~~l~~~l~~~ 175 (355)
.|+.+++.++..++.+ +.++.... ..++.+|.+.++.+.+. ... ... ....+++||+++ ++++|++.++++
T Consensus 164 ~~~~~~~~~~~~~~~l-~~~l~~~~-~~~g~~p~~~~~~~~~~--~~~--~~~--~G~~~p~GG~~~-l~~aL~~~~~~~ 234 (501)
T 4dgk_A 164 RSVYSKVASYIEDEHL-RQAFSFHS-LLVGGNPFATSSIYTLI--HAL--ERE--WGVWFPRGGTGA-LVQGMIKLFQDL 234 (501)
T ss_dssp HHHHHHHHTTCCCHHH-HHHHHHHH-HHHHSCC--CCCTHHHH--HHH--HSC--CCEEEETTHHHH-HHHHHHHHHHHT
T ss_pred ccHHHHHHHHhccHHH-Hhhhhhhh-cccCCCcchhhhhhhhh--hhh--hcc--CCeEEeCCCCcc-hHHHHHHHHHHh
Confidence 4788888887555554 55554433 24556667666654432 221 222 235789999999 889999999999
Q ss_pred CcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhhH-HHhhhcccccCcHHHHhhccCC-cccEEEEEE
Q 018455 176 GCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTL-QELIKNSILCNREEFLKVLNLA-SIDVVSVKL 252 (355)
Q Consensus 176 G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~~-~~l~~~~~l~~~~~~~~~~~l~-~~~~~~v~l 252 (355)
|++|++|++|++|+.++ +++++|++ +|++++||.||++++++.+ ..|++..+.+ ......+++.. ..+.+++++
T Consensus 235 Gg~I~~~~~V~~I~~~~--~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~-~~~~~~~~~~~~~~s~~~~~~ 311 (501)
T 4dgk_A 235 GGEVVLNARVSHMETTG--NKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAA-VKQSNKLQTKRMSNSLFVLYF 311 (501)
T ss_dssp TCEEECSCCEEEEEEET--TEEEEEEETTSCEEECSCEEECCC----------------------------CCEEEEEEE
T ss_pred CCceeeecceeEEEeeC--CeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccc-hhhhhhhhccccCCceeEEEe
Confidence 99999999999999988 56888988 7899999999999988755 5677664432 12222444444 345778899
Q ss_pred EEccCCCCCCCCcceeccCC--Cc------------cceeeE-cccccccccCCCc-eEEEE-EeeCCCCCCCC----CH
Q 018455 253 WFDKKVTVPNVSNACSGFGD--SL------------AWTFFD-LNKIYDEHKDDSA-TVIQA-DFYHANELMPL----KD 311 (355)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~--~~------------~~~~~~-~~~~~~~~~~~~g-~~l~~-~~~~~~~~~~~----~~ 311 (355)
+++.+......++++++.+. .+ ...+.. .+...|..+ |+| ..+.+ +..+...+... ..
T Consensus 312 ~l~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~a-p~G~~~~~~~~~~p~~~~~~~~~~~~~ 390 (501)
T 4dgk_A 312 GLNHHHDQLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLA-PEGCGSYYVLAPVPHLGTANLDWTVEG 390 (501)
T ss_dssp EESSCCTTSCSEEEEEECC-------------CCCEEEEEEECGGGTCGGGS-STTCEEEEEEEEECCTTTSCCCHHHHH
T ss_pred cccCCccccccceeccccchhhhccccccccccccCCceecccCCCCCCCcC-CCCCceEEEEEecCccccccccHHHHH
Confidence 99887653222333333210 00 011111 122233344 344 33322 22232222222 24
Q ss_pred HHHHHHHHHHHhhh-cccCCCceeeeee
Q 018455 312 DQVVAKAVSYLSKC-IKDFSTATVMDHK 338 (355)
Q Consensus 312 ee~~~~~~~~l~~~-~p~~~~~~~~~~~ 338 (355)
+++.+.+++.|++. +|++++ .++..+
T Consensus 391 ~~~~~~vl~~l~~~~~P~~~~-~i~~~~ 417 (501)
T 4dgk_A 391 PKLRDRIFAYLEQHYMPGLRS-QLVTHR 417 (501)
T ss_dssp HHHHHHHHHHHHHHTCTTHHH-HEEEEE
T ss_pred HHHHHHHHHHHHHhhCCChHH-ceEEEE
Confidence 67788899999875 588763 444443
No 16
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.59 E-value=1.4e-14 Score=137.16 Aligned_cols=249 Identities=12% Similarity=0.078 Sum_probs=148.6
Q ss_pred cccccHHH--HHHHhCC--CHHHHHHHHHHHHH-hhhCCChhhccHHHHHHHHHHHHHhcCCCcceEEecCCcchHHHHH
Q 018455 93 YDSITARE--LFKQFGC--SERLYRNVIGPLVQ-VGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEP 167 (355)
Q Consensus 93 ~d~~s~~~--~l~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~Sa~~~~~~~~~~~~~~~~~~~~~~~~gg~~~~l~~~ 167 (355)
.+++|+.+ |+.+... .....+.++++++. ..++.+++..|+..+... ..+ ........+.+.+||+++ +.+.
T Consensus 135 ~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~-~~~~~~~~~~~~~gG~~~-l~~~ 211 (472)
T 1b37_A 135 RDDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRVTSLQNTVPL-ATF-SDFGDDVYFVADQRGYEA-VVYY 211 (472)
T ss_dssp TTCCBHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCGGGBBSTTTSSC-HHH-HHHCSEEEEECCTTCTTH-HHHH
T ss_pred chhhhHHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccccccchhhcccc-ccc-cccCCceeeeecCCcHHH-HHHH
Confidence 46777764 6665421 11123456666653 345777888776433211 111 111111122234799998 7788
Q ss_pred HHHHHHHc--------CcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhhHHHhh--hcccccCcHHH
Q 018455 168 WMDSMRTR--------GCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELI--KNSILCNREEF 236 (355)
Q Consensus 168 l~~~l~~~--------G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~~~~l~--~~~~l~~~~~~ 236 (355)
|++.+.+. |++|+++++|++|..++++ +. |++ +|++++||+||+|+|+..+.+++ +.+.++ ....
T Consensus 212 l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~--v~-v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp-~~~~ 287 (472)
T 1b37_A 212 LAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGG--VT-VKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLP-TWKV 287 (472)
T ss_dssp HHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSC--EE-EEETTSCEEEESEEEECSCHHHHHTTSSEEESCCC-HHHH
T ss_pred HHHhccccccccccccccEEEcCCEEEEEEEcCCc--EE-EEECCCCEEEcCEEEEecCHHHhccCCeeECCCCC-HHHH
Confidence 88877654 6799999999999998753 64 766 67799999999999999998754 344443 2223
Q ss_pred HhhccCCcccEEEEEEEEccCCCCCCC-Cccee-ccC-CCccceeeEcccccccccCCCceEEEEEeeC--CCCCCCCCH
Q 018455 237 LKVLNLASIDVVSVKLWFDKKVTVPNV-SNACS-GFG-DSLAWTFFDLNKIYDEHKDDSATVIQADFYH--ANELMPLKD 311 (355)
Q Consensus 237 ~~~~~l~~~~~~~v~l~~~~~~~~~~~-~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~--~~~~~~~~~ 311 (355)
+.++++.+.++.++++.|++++|.... .+.+. ... ..... ++.. ..+. . +++.++.+.+.. +..|..+++
T Consensus 288 ~ai~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~-~-p~~~~l~~~~~~~~a~~~~~~~~ 362 (472)
T 1b37_A 288 RAIYQFDMAVYTKIFLKFPRKFWPEGKGREFFLYASSRRGYYG-VWQE--FEKQ-Y-PDANVLLVTVTDEESRRIEQQSD 362 (472)
T ss_dssp HHHHHSEEECEEEEEEECSSCCSCCSTTCSEEEECCSSTTSSC-EEEE--CTTT-S-TTCCEEEEEEEHHHHHHHHTSCH
T ss_pred HHHHhcCCcceeEEEEECCCcCCCCCCCcceEEecccCCccce-eeec--ccCC-C-CCCCEEEEEechHHHHHHHhCCH
Confidence 456777888899999999999884211 11111 111 11111 2221 1111 1 233444333331 224556799
Q ss_pred HHHHHHHHHHHhhhcccCCCceeeeeeEEec------CCCccccCCCC
Q 018455 312 DQVVAKAVSYLSKCIKDFSTATVMDHKIRRF------PKSLTHFFPGS 353 (355)
Q Consensus 312 ee~~~~~~~~l~~~~p~~~~~~~~~~~v~~~------~~a~~~~~pg~ 353 (355)
+++++.++++|+++||+....+++...+.+| ..+.+.+.||.
T Consensus 363 ~e~~~~~l~~L~~~~Pg~~~~~~~~~~~~~W~~~~~~~G~~~~~~~g~ 410 (472)
T 1b37_A 363 EQTKAEIMQVLRKMFPGKDVPDATDILVPRWWSDRFYKGTFSNWPVGV 410 (472)
T ss_dssp HHHHHHHHHHHHHHCTTSCCCCCSEEECCCTTTCTTTSSSEEECBTTC
T ss_pred HHHHHHHHHHHHHHcCCCCCCCCceEEecccCCCCCCCcccCCCCCCC
Confidence 9999999999999998754344555666666 33444445664
No 17
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.58 E-value=2.6e-13 Score=129.20 Aligned_cols=216 Identities=14% Similarity=0.076 Sum_probs=132.1
Q ss_pred hhcccccHHHHHHHhC-CCHHHHHHHHHHHHHhhhCCChhhccHHHHHHHHHHHHHhcCCCcceEEecCCcchHHHHHHH
Q 018455 91 RKYDSITARELFKQFG-CSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWM 169 (355)
Q Consensus 91 ~~~d~~s~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~~~~~~~~~~~~~~~~~~~~gg~~~~l~~~l~ 169 (355)
..+|+.|+.+|+++.+ .+...++.+ ..++.... ....+....+..... .. .......++||+++ ++++|+
T Consensus 178 ~~~~~~s~~~~l~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~--~~--~~~~~~~~~gG~~~-l~~~l~ 248 (498)
T 2iid_A 178 NKYDTYSTKEYLIKEGDLSPGAVDMI-GDLLNEDS---GYYVSFIESLKHDDI--FA--YEKRFDEIVDGMDK-LPTAMY 248 (498)
T ss_dssp HHHTTSBHHHHHHHTSCCCHHHHHHH-HHHTTCGG---GTTSBHHHHHHHHHH--HT--TCCCEEEETTCTTH-HHHHHH
T ss_pred HHhhhhhHHHHHHHccCCCHHHHHHH-HHhcCccc---chhHHHHHHHHHHhc--cc--cCcceEEeCCcHHH-HHHHHH
Confidence 4568899999999865 466665533 22221100 011122211111111 11 12345678999998 778888
Q ss_pred HHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCe----EEecCEEEEccChhhHHHhhhcccccCcHHHHhhccCCc
Q 018455 170 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE----TYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLAS 244 (355)
Q Consensus 170 ~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~----~~~ad~VV~a~p~~~~~~l~~~~~l~~~~~~~~~~~l~~ 244 (355)
+.+.+ +|++|++|++|..++++ + .|++ +|+ +++||+||+|+|+..+.+|.+.|+++. ...+.++++++
T Consensus 249 ~~l~~---~i~~~~~V~~I~~~~~~--v-~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~p~Lp~-~~~~ai~~l~~ 321 (498)
T 2iid_A 249 RDIQD---KVHFNAQVIKIQQNDQK--V-TVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLLP-KKAHALRSVHY 321 (498)
T ss_dssp HHTGG---GEESSCEEEEEEECSSC--E-EEEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCCH-HHHHHHHHCCE
T ss_pred Hhccc---ccccCCEEEEEEECCCe--E-EEEEecCCcccceEEeCEEEECCChHHHhheecCCCCCH-HHHHHHHhCCC
Confidence 77643 89999999999998743 5 4655 443 589999999999998888876665542 22335678888
Q ss_pred ccEEEEEEEEccCCCCCCC-CcceeccCCCccceeeEcccccccccCCCceEEEEEee--CCCCCCCCCHHHHHHHHHHH
Q 018455 245 IDVVSVKLWFDKKVTVPNV-SNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFY--HANELMPLKDDQVVAKAVSY 321 (355)
Q Consensus 245 ~~~~~v~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~--~~~~~~~~~~ee~~~~~~~~ 321 (355)
.++.++++.|++++|.... .+.....+.+..++++. +...| ++..++..... .+..+..++++++.+.++++
T Consensus 322 ~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~-s~~~p----~g~~~L~~~~~g~~a~~~~~~~~~~~~~~~l~~ 396 (498)
T 2iid_A 322 RSGTKIFLTCTTKFWEDDGIHGGKSTTDLPSRFIYYP-NHNFT----NGVGVIIAYGIGDDANFFQALDFKDCADIVFND 396 (498)
T ss_dssp ECEEEEEEEESSCGGGGGTCCSSEEEESSTTCEEECC-SSCCT----TSCEEEEEEEEHHHHHTTTTSCHHHHHHHHHHH
T ss_pred cceeEEEEEeCCCCccCCCccCCcccCCCCcceEEEC-CCCCC----CCCcEEEEEeCCccHhhhhcCCHHHHHHHHHHH
Confidence 8999999999999883210 01111112222222222 21112 12234333222 23457788999999999999
Q ss_pred Hhhhcc
Q 018455 322 LSKCIK 327 (355)
Q Consensus 322 l~~~~p 327 (355)
|+++++
T Consensus 397 L~~~~g 402 (498)
T 2iid_A 397 LSLIHQ 402 (498)
T ss_dssp HHHHHT
T ss_pred HHHHcC
Confidence 999997
No 18
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.55 E-value=1.2e-13 Score=132.80 Aligned_cols=221 Identities=12% Similarity=0.110 Sum_probs=144.7
Q ss_pred CchHHHHHHHhCCCCCCCccc-ceeec-CCCceecccccccCCCCCCCccccccccCCCCCHHhhhchhhHHHHHhccCC
Q 018455 8 FRNIFSLVDELGIKPFTGWMK-SAQYS-EEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDN 85 (355)
Q Consensus 8 y~~~~~l~~elGl~~~~~~~~-~~~~~-~~g~~~~~~~~~~~~~~p~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 85 (355)
...+.+|+.++|+.....|.. ..+|. .+|+. . .+ |.+...+++.+.+++.+|.++.+++.....+..
T Consensus 236 ~g~lv~LL~~sgV~~yLEFk~v~~~y~~~~G~~------~---~V--Pas~~eif~s~~Lsl~EKr~L~kFl~~~~~~~~ 304 (650)
T 1vg0_A 236 RGLLIDLLIKSNVSRYAEFKNITRILAFREGTV------E---QV--PCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEE 304 (650)
T ss_dssp SSHHHHHHHHHTGGGGCCEEECCEEEEESSSSE------E---EC--CCSHHHHHHCSSSCHHHHHHHHHHHHHHHTGGG
T ss_pred CcHHHHHHHHcCCcceeeEEEccceEEecCCCE------e---EC--CCCHHHHHhCcCCCHHHHHHHHHHHHHHHHhcc
Confidence 445889999999987777653 23332 44542 1 12 334444667789999999998877766555432
Q ss_pred ChhhhhhcccccHHHHHHHhCCCHHHHHHHHHHHHHhhhCCChhhccHHHHHHHHHHHH--HhcCCCcceEEecCCcchH
Q 018455 86 TDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII--LAHQKNFDLVWCRGTLREK 163 (355)
Q Consensus 86 ~~~~~~~~d~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~~~~~~~--~~~~~~~~~~~~~gg~~~~ 163 (355)
.+..+..++..|+.+|+++++.++.+++.+.. .+ +++.. +..++...+..+..++ +...+.....|++||+++
T Consensus 305 ~p~~~~~~d~~S~~d~L~~~~ls~~L~~~L~~-~l-al~~~--~~~pa~~~l~~i~~~l~sl~~yg~sg~~yp~GG~g~- 379 (650)
T 1vg0_A 305 HPDEYRAYEGTTFSEYLKTQKLTPNLQYFVLH-SI-AMTSE--TTSCTVDGLKATKKFLQCLGRYGNTPFLFPLYGQGE- 379 (650)
T ss_dssp CHHHHHTTTTSBHHHHHTTSSSCHHHHHHHHH-HT-TC--C--CSCBHHHHHHHHHHHHHHTTSSSSSSEEEETTCTTH-
T ss_pred ChHHHhhhccCCHHHHHHHhCCCHHHHHHHHH-HH-hccCC--CCCchhHHHHHHHHHHHHHHhhccCceEEeCCchhH-
Confidence 23345577899999999999899887664433 22 23322 2234444433233221 122223467899999999
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhhHHHhhhcccccCcHHHHhhccC
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNL 242 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~~~~l~~~~~l~~~~~~~~~~~l 242 (355)
|+++|++.++..|++|+++++|++|..+++.|++++|++ +|++++||.||++ +.. ++... ..+.
T Consensus 380 L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~--~~~----lp~~~---------~~~~ 444 (650)
T 1vg0_A 380 LPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIE--DSY----LSENT---------CSRV 444 (650)
T ss_dssp HHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEE--GGG----BCTTT---------TTTC
T ss_pred HHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEC--hhh----cCHhH---------hccc
Confidence 899999999999999999999999998763135778876 5899999999992 221 11100 1122
Q ss_pred CcccEEEEEEEEccCCC
Q 018455 243 ASIDVVSVKLWFDKKVT 259 (355)
Q Consensus 243 ~~~~~~~v~l~~~~~~~ 259 (355)
.+..+..+.+++++++.
T Consensus 445 ~~~~v~R~i~i~~~pi~ 461 (650)
T 1vg0_A 445 QYRQISRAVLITDGSVL 461 (650)
T ss_dssp CCEEEEEEEEEESSCSS
T ss_pred cccceEEEEEEecCCCC
Confidence 34467778888888764
No 19
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.46 E-value=5.3e-12 Score=117.61 Aligned_cols=213 Identities=12% Similarity=0.119 Sum_probs=127.3
Q ss_pred cccccHHHHHHHhCCCHHHHHHHHHHHHHhhhCCChhhccHHHHHHHHHHH-HHhcCCCcceEEecCCcchHHHHHHHHH
Q 018455 93 YDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFI-ILAHQKNFDLVWCRGTLREKIFEPWMDS 171 (355)
Q Consensus 93 ~d~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~~~~~~-~~~~~~~~~~~~~~gg~~~~l~~~l~~~ 171 (355)
.+.+|+.+|+++++.+ .+.+.+..|++.+.++ +++++|+.+++.++... +.....+ ....+.||+++ +++++.+.
T Consensus 140 ~~~~s~~~~l~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~-l~~~l~~~ 215 (424)
T 2b9w_A 140 DLMLPFDEFLALNGCE-AARDLWINPFTAFGYG-HFDNVPAAYVLKYLDFVTMMSFAKG-DLWTWADGTQA-MFEHLNAT 215 (424)
T ss_dssp GGGSBHHHHHHHTTCG-GGHHHHTTTTCCCCCC-CTTTSBHHHHHHHSCHHHHHHHHHT-CCBCCTTCHHH-HHHHHHHH
T ss_pred hhccCHHHHHHhhCcH-HHHHHHHHHHHhhccC-ChHhcCHHHHHHhhhHhhhhcccCC-ceEEeCChHHH-HHHHHHHh
Confidence 4568999999998765 4667777888887775 67899998876544321 0110111 12456799888 66777654
Q ss_pred HHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChhhHHHhhhcccccCcHHHHhhccCCcccEEEEE
Q 018455 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVK 251 (355)
Q Consensus 172 l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~v~ 251 (355)
+ +.+|++|++|++|..+++ ++ .|++++++++||+||+|+|++.+.++++..+ .....+.++.+.++. +.
T Consensus 216 l---~~~v~~~~~V~~i~~~~~--~v-~v~~~~g~~~ad~Vv~a~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~-~~ 284 (424)
T 2b9w_A 216 L---EHPAERNVDITRITREDG--KV-HIHTTDWDRESDVLVLTVPLEKFLDYSDADD----DEREYFSKIIHQQYM-VD 284 (424)
T ss_dssp S---SSCCBCSCCEEEEECCTT--CE-EEEESSCEEEESEEEECSCHHHHTTSBCCCH----HHHHHHTTCEEEEEE-EE
T ss_pred h---cceEEcCCEEEEEEEECC--EE-EEEECCCeEEcCEEEECCCHHHHhhccCCCH----HHHHHHhcCCcceeE-EE
Confidence 4 568999999999998764 36 4777544599999999999998766654311 111234555554433 33
Q ss_pred EEEccCCCCCCCCcceeccC--C-CccceeeEcccccccccCCCceEEEEEe-eCCCCCCCCCHHHHHHHHHHHHhhhcc
Q 018455 252 LWFDKKVTVPNVSNACSGFG--D-SLAWTFFDLNKIYDEHKDDSATVIQADF-YHANELMPLKDDQVVAKAVSYLSKCIK 327 (355)
Q Consensus 252 l~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~~~~~~~~~~~ee~~~~~~~~l~~~~p 327 (355)
+.+...++. ...+++.+ . ..++.+++.... ++ .+..++.+.. .....+...+++++++.++++|+++.+
T Consensus 285 ~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~-~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l~~ 357 (424)
T 2b9w_A 285 ACLVKEYPT---ISGYVPDNMRPERLGHVMVYYHRW-AD---DPHQIITTYLLRNHPDYADKTQEECRQMVLDDMETFGH 357 (424)
T ss_dssp EEEESSCCS---SEEECGGGGSGGGTTSCCEEEECC-TT---CTTSCEEEEEECCBTTBCCCCHHHHHHHHHHHHHHTTC
T ss_pred EEEeccCCc---ccccccCCCCCcCCCcceEEeeec-CC---CCceEEEEEeccCCCcccccChHHHHHHHHHHHHHcCC
Confidence 334333321 11222211 0 112233432222 21 1223322222 233456677899999999999998543
No 20
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.45 E-value=7.7e-12 Score=116.71 Aligned_cols=225 Identities=13% Similarity=0.104 Sum_probs=141.5
Q ss_pred hhcccccHHHHHHHhCCCHHHHHHHHHHHHHhhhCCChhhccHHHHHHHHHHHHHhcC-----CCcceEEecCCcchHHH
Q 018455 91 RKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQ-----KNFDLVWCRGTLREKIF 165 (355)
Q Consensus 91 ~~~d~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~~~~~~~~~~~-----~~~~~~~~~gg~~~~l~ 165 (355)
..+| .|+.+|+.+.+.++.. ..++.+++...++.+++++|+..++.++... ... .... ..+.+|++. +.
T Consensus 137 ~~~d-~s~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~g~~~-l~ 210 (431)
T 3k7m_X 137 EDLD-IPLNEYVDKLDLPPVS-RQFLLAWAWNMLGQPADQASALWMLQLVAAH--HYSILGVVLSLD-EVFSNGSAD-LV 210 (431)
T ss_dssp GGGC-SBHHHHHHHHTCCHHH-HHHHHHHHHHHHSSCTTTSBHHHHHHHHHHT--TSCHHHHHHTCC-EEETTCTHH-HH
T ss_pred hhhc-CCHHHHHHhcCCCHHH-HHHHHHHHHHhcCCChhhhhHHHHHHHHHhc--CCccceeecchh-hhcCCcHHH-HH
Confidence 3466 9999999998777665 4578888999999999999999887766532 000 0011 156788776 43
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhhHHHhhhcccccCcHHHHhhccCCc
Q 018455 166 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLAS 244 (355)
Q Consensus 166 ~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~~~~l~~~~~l~~~~~~~~~~~l~~ 244 (355)
+.+ +++.| +|++|++|++|+.++++ + .|++ +|++++||+||+|+|+..++++...|.++. .....+..+.+
T Consensus 211 ~~~---~~~~g-~i~~~~~V~~i~~~~~~--v-~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~-~~~~~~~~~~~ 282 (431)
T 3k7m_X 211 DAM---SQEIP-EIRLQTVVTGIDQSGDV--V-NVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPE-RRRSVIEEGHG 282 (431)
T ss_dssp HHH---HTTCS-CEESSCCEEEEECSSSS--E-EEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCH-HHHHHHHHCCC
T ss_pred HHH---HhhCC-ceEeCCEEEEEEEcCCe--E-EEEECCCCEEEeCEEEEecCcchHhheeeCCCCCH-HHHHHHHhCCC
Confidence 333 34556 99999999999987753 5 4766 577899999999999999988876665532 21224555666
Q ss_pred ccEEEEEEEEccCCCCCCCCcceeccCCCccceeeEcccccccccCCCceEEEEEeeCCCCCCCCCHHHHHHHHHHHHhh
Q 018455 245 IDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSK 324 (355)
Q Consensus 245 ~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~ee~~~~~~~~l~~ 324 (355)
....++.+.|+++++ + +++.+.+....+++..... .++.++ +.+...+.+...+.+ .+.+.|++
T Consensus 283 ~~~~kv~~~~~~~~~-----~-i~~~~d~~~~~~~~~~~~~-----~~~~~l-~~~~~g~~~~~~~~~----~~~~~l~~ 346 (431)
T 3k7m_X 283 GQGLKILIHVRGAEA-----G-IECVGDGIFPTLYDYCEVS-----ESERLL-VAFTDSGSFDPTDIG----AVKDAVLY 346 (431)
T ss_dssp CCEEEEEEEEESCCT-----T-EEEEBSSSSSEEEEEEECS-----SSEEEE-EEEEETTTCCTTCHH----HHHHHHHH
T ss_pred cceEEEEEEECCCCc-----C-ceEcCCCCEEEEEeCcCCC-----CCCeEE-EEEeccccCCCCCHH----HHHHHHHH
Confidence 678999999998875 2 3332222222245433220 123333 334433333332332 35667888
Q ss_pred hcccCCCceeeeeeEEecCCC
Q 018455 325 CIKDFSTATVMDHKIRRFPKS 345 (355)
Q Consensus 325 ~~p~~~~~~~~~~~v~~~~~a 345 (355)
++|++.......+.|...|++
T Consensus 347 ~~~~~~~~~~~~~~W~~d~~~ 367 (431)
T 3k7m_X 347 YLPEVEVLGIDYHDWIADPLF 367 (431)
T ss_dssp HCTTCEEEEEECCCTTTCTTT
T ss_pred hcCCCCccEeEecccCCCCCC
Confidence 888753222233455555543
No 21
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.43 E-value=2.9e-12 Score=119.70 Aligned_cols=199 Identities=9% Similarity=0.105 Sum_probs=125.0
Q ss_pred CCchHHHHHHHhCCCCCCCccc-ceeec-CCCceecccccccCCCCCCCccccccccCCCCCHHhhhchhhHHHHHhccC
Q 018455 7 PFRNIFSLVDELGIKPFTGWMK-SAQYS-EEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFD 84 (355)
Q Consensus 7 ~y~~~~~l~~elGl~~~~~~~~-~~~~~-~~g~~~~~~~~~~~~~~p~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 84 (355)
....+.++++++|+.....+.. ...+. .+|+.+ .+|. +....+.....++.++.++.+++..+.++.
T Consensus 85 ~~~~l~~ll~~lgl~~~l~~~~~~~~~~~~~g~~~---------~~p~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 153 (433)
T 1d5t_A 85 ANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIY---------KVPS--TETEALASNLMGMFEKRRFRKFLVFVANFD 153 (433)
T ss_dssp TTSHHHHHHHHHTGGGGCCEEECCEEEEEETTEEE---------ECCC--SHHHHHHCSSSCHHHHHHHHHHHHHHHHCC
T ss_pred ccchHHHHHHHcCCccceEEEEeCceEEeeCCEEE---------ECCC--CHHHHhhCcccChhhHHHHHHHHHHHHhhc
Confidence 3457889999999985444432 12221 355421 1222 111122333455666666555544444332
Q ss_pred CChhh---hhhcccccHHHHHHHhCCCHHHHHHHHHHHHHhhhCCChhhccHHHHHHHHHHHHHh--cCCCcceEEecCC
Q 018455 85 NTDVA---WRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILA--HQKNFDLVWCRGT 159 (355)
Q Consensus 85 ~~~~~---~~~~d~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~~~~~~~~~--~~~~~~~~~~~gg 159 (355)
...+. ....+++|+.+|+++++.++.+++ ++...+....+.++.+.++...+..+..+... ..+.....+++||
T Consensus 154 ~~~p~~~~~~~~~~~s~~~~l~~~~~~~~l~~-~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~g~~~~~~p~gG 232 (433)
T 1d5t_A 154 ENDPKTFEGVDPQNTSMRDVYRKFDLGQDVID-FTGHALALYRTDDYLDQPCLETINRIKLYSESLARYGKSPYLYPLYG 232 (433)
T ss_dssp TTCGGGGTTCCTTTSBHHHHHHHTTCCHHHHH-HHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSCCSSSCCSEEEETTC
T ss_pred ccCchhccccccccCCHHHHHHHcCCCHHHHH-HHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHhcCCCcEEEeCcC
Confidence 11111 113568999999999888888755 44333222233456666665444333333211 1122346789999
Q ss_pred cchHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChhh
Q 018455 160 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (355)
Q Consensus 160 ~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~ 220 (355)
+++ ++++|++.+++.|++|+++++|++|..++ +++++|.++|++++||+||+|++++.
T Consensus 233 ~~~-l~~~l~~~~~~~G~~i~~~~~V~~I~~~~--~~v~~v~~~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 233 LGE-LPQGFARLSAIYGGTYMLNKPVDDIIMEN--GKVVGVKSEGEVARCKQLICDPSYVP 290 (433)
T ss_dssp TTH-HHHHHHHHHHHHTCCCBCSCCCCEEEEET--TEEEEEEETTEEEECSEEEECGGGCG
T ss_pred HHH-HHHHHHHHHHHcCCEEECCCEEEEEEEeC--CEEEEEEECCeEEECCEEEECCCCCc
Confidence 998 88999999999999999999999999877 55777888999999999999999874
No 22
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.41 E-value=1.5e-12 Score=123.59 Aligned_cols=179 Identities=13% Similarity=0.133 Sum_probs=117.4
Q ss_pred ceEEecCCcchHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CC---eEEecCEEEEccChhhHHHhhhc
Q 018455 152 DLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK---ETYSAGAVVLAVGISTLQELIKN 227 (355)
Q Consensus 152 ~~~~~~gg~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g---~~~~ad~VV~a~p~~~~~~l~~~ 227 (355)
...+++||+++ ++++|++.+.+ ++|++|++|++|..+++ ++. |++ +| ++++||+||+|+|+..+.+|.+
T Consensus 230 ~~~~~~gG~~~-l~~~l~~~l~~--~~i~~~~~V~~i~~~~~--~v~-v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~~- 302 (489)
T 2jae_A 230 MMFTPVGGMDR-IYYAFQDRIGT--DNIVFGAEVTSMKNVSE--GVT-VEYTAGGSKKSITADYAICTIPPHLVGRLQN- 302 (489)
T ss_dssp SEEEETTCTTH-HHHHHHHHHCG--GGEETTCEEEEEEEETT--EEE-EEEEETTEEEEEEESEEEECSCHHHHTTSEE-
T ss_pred cEEeecCCHHH-HHHHHHHhcCC--CeEEECCEEEEEEEcCC--eEE-EEEecCCeEEEEECCEEEECCCHHHHHhCcc-
Confidence 45678999998 78888877632 78999999999999874 353 655 44 6899999999999999888765
Q ss_pred ccccCcHHHHhhccCCcccEEEEEEEEccCCCCCCCCcc---eeccCCCccceeeEcccccccccCCCceEEEEEee--C
Q 018455 228 SILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNA---CSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFY--H 302 (355)
Q Consensus 228 ~~l~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~--~ 302 (355)
.++ ....+.+.++++.++.++++.|++++|.. ..+. +...+.++..++++ +...+ .+.+.++.+... .
T Consensus 303 -~l~-~~~~~~l~~~~~~~~~kv~l~~~~~~w~~-~~~~~g~~~~~~~~~~~~~~~-s~~~~---~~~~~l~~~~~~g~~ 375 (489)
T 2jae_A 303 -NLP-GDVLTALKAAKPSSSGKLGIEYSRRWWET-EDRIYGGASNTDKDISQIMFP-YDHYN---SDRGVVVAYYSSGKR 375 (489)
T ss_dssp -CCC-HHHHHHHHTEECCCEEEEEEEESSCHHHH-TTCCCSCEEEESSTTCEEECC-SSSTT---SSCEEEEEEEEETHH
T ss_pred -CCC-HHHHHHHHhCCCccceEEEEEeCCCCccC-CCCcccccccCCCCceEEEeC-CCCCC---CCCCEEEEEeeCCch
Confidence 222 12233567788889999999999988731 1111 11122333332222 22111 134444432222 2
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhhccc-CCCceeeeeeEEecCCC
Q 018455 303 ANELMPLKDDQVVAKAVSYLSKCIKD-FSTATVMDHKIRRFPKS 345 (355)
Q Consensus 303 ~~~~~~~~~ee~~~~~~~~l~~~~p~-~~~~~~~~~~v~~~~~a 345 (355)
+..|..++++++++.++++|++++|. +. .++....+.+|.+.
T Consensus 376 ~~~~~~~~~~~~~~~~l~~L~~~~~~~~~-~~~~~~~~~~W~~~ 418 (489)
T 2jae_A 376 QEAFESLTHRQRLAKAIAEGSEIHGEKYT-RDISSSFSGSWRRT 418 (489)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHHHCGGGG-SSEEEEEEEEGGGS
T ss_pred hhhhhcCCHHHHHHHHHHHHHHHcCcchh-hhccccEEEEcCCC
Confidence 23466789999999999999999986 43 23555555556543
No 23
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.38 E-value=2.8e-12 Score=125.96 Aligned_cols=171 Identities=16% Similarity=0.185 Sum_probs=114.6
Q ss_pred EEecCCcchHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-C------CeEEecCEEEEccChhhHHHh--
Q 018455 154 VWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G------KETYSAGAVVLAVGISTLQEL-- 224 (355)
Q Consensus 154 ~~~~gg~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~------g~~~~ad~VV~a~p~~~~~~l-- 224 (355)
..++||+++ |+++|++ +.+|++|++|++|..++++ + .|++ + +++++||+||+|+|+..++++
T Consensus 394 ~~~~gG~~~-l~~~La~-----~l~I~l~~~V~~I~~~~~~--v-~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~ 464 (662)
T 2z3y_A 394 LTVRNGYSC-VPVALAE-----GLDIKLNTAVRQVRYTASG--C-EVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPP 464 (662)
T ss_dssp EEETTCTTH-HHHHHTT-----TCEEETTEEEEEEEEETTE--E-EEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSC
T ss_pred eeecCcHHH-HHHHHHh-----cCceecCCeEEEEEECCCc--E-EEEEeecccCCCCeEEEeCEEEECCCHHHHhcccC
Confidence 457899998 6666653 5699999999999998753 5 4554 3 468999999999999999873
Q ss_pred --hhcccccCcHHHHhhccCCcccEEEEEEEEccCCCCCCCCcceeccC-C---Ccc--ceeeEcccccccccCCCceEE
Q 018455 225 --IKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFG-D---SLA--WTFFDLNKIYDEHKDDSATVI 296 (355)
Q Consensus 225 --~~~~~l~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~-~---~~~--~~~~~~~~~~~~~~~~~g~~l 296 (355)
.+.|+++. ...+.++++++.++.++.+.|++++|.. ..+ .++.- . ..+ +++++.+ ..+.++
T Consensus 465 ~i~f~P~LP~-~k~~Ai~~l~~g~~~KV~l~f~~~fW~~-~~~-~~G~l~~~~~~~~~~~~~~~~~--------~~~vL~ 533 (662)
T 2z3y_A 465 AVQFVPPLPE-WKTSAVQRMGFGNLNKVVLCFDRVFWDP-SVN-LFGHVGSTTASRGELFLFWNLY--------KAPILL 533 (662)
T ss_dssp SSEEESCCCH-HHHHHHHHSEECCCEEEEEECSSCCSCT-TCS-EEEECCSSSTTTTEEEEEECCS--------SSSEEE
T ss_pred ceEEcCCCCH-HHHHHHHhCCccceeEEEEEcCcccccC-CCC-ceeeecCCCCCCCceeEEEeCC--------CCCEEE
Confidence 35565542 1223567888889999999999999942 222 33311 1 111 1223211 123343
Q ss_pred EEEee--CCCCCCCCCHHHHHHHHHHHHhhhcccCCCceeeeeeEEecCCC
Q 018455 297 QADFY--HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKS 345 (355)
Q Consensus 297 ~~~~~--~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~v~~~~~a 345 (355)
..+. .+..+..++++++++.++++|+++|+.....++..+.+++|...
T Consensus 534 -~~~~G~~a~~~~~lsdee~~~~~l~~L~~~~g~~~~~~p~~~~v~~W~~d 583 (662)
T 2z3y_A 534 -ALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRAD 583 (662)
T ss_dssp -EEECTHHHHHHTTSCHHHHHHHHHHHHHHHHCTTSSCCCSEEEECCTTTC
T ss_pred -EEeccHhHHHHHhCCHHHHHHHHHHHHHHHhCCcccCCCceeEEEEECCC
Confidence 2222 23346678999999999999999997643345666777777663
No 24
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.36 E-value=4.8e-12 Score=126.35 Aligned_cols=170 Identities=16% Similarity=0.181 Sum_probs=114.8
Q ss_pred EEecCCcchHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-C------CeEEecCEEEEccChhhHHHh--
Q 018455 154 VWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G------KETYSAGAVVLAVGISTLQEL-- 224 (355)
Q Consensus 154 ~~~~gg~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~------g~~~~ad~VV~a~p~~~~~~l-- 224 (355)
..++||+++ |+++|++ +.+|++|++|++|..++++ | .|++ + |++++||+||+|+|+..++++
T Consensus 565 ~~~~gG~~~-L~~aLa~-----~l~I~Lnt~V~~I~~~~~g--V-~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~ 635 (852)
T 2xag_A 565 LTVRNGYSC-VPVALAE-----GLDIKLNTAVRQVRYTASG--C-EVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPP 635 (852)
T ss_dssp EEETTCTTH-HHHHHTT-----TCCEECSEEEEEEEEETTE--E-EEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSC
T ss_pred EEecCcHHH-HHHHHHh-----CCCEEeCCeEEEEEEcCCc--E-EEEEeecccCCCCeEEECCEEEECCCHHHHHhhhc
Confidence 457899998 6666653 4589999999999998753 5 4654 3 468999999999999999874
Q ss_pred --hhcccccCcHHHHhhccCCcccEEEEEEEEccCCCCCCCCcceeccC------CCccceeeEcccccccccCCCceEE
Q 018455 225 --IKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFG------DSLAWTFFDLNKIYDEHKDDSATVI 296 (355)
Q Consensus 225 --~~~~~l~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~~l 296 (355)
.+.|+|+. ...+.++++++.++.++++.|++++|.. ..+ .++.. ....+++++.. . ...++
T Consensus 636 ~I~F~P~LP~-~k~~AI~~l~~g~v~KV~L~F~~~fW~~-~~~-~fG~l~~~~~~~~~l~~~~~~~------~--~pvLl 704 (852)
T 2xag_A 636 AVQFVPPLPE-WKTSAVQRMGFGNLNKVVLCFDRVFWDP-SVN-LFGHVGSTTASRGELFLFWNLY------K--APILL 704 (852)
T ss_dssp SSEEESCCCH-HHHHHHHHSEECCCEEEEEECSSCCSCT-TCC-EEEECCSSSTTTTTTCEEEECS------S--SSEEE
T ss_pred ccccCCCCCH-HHHHHHHcCCccceEEEEEEcCCcccCC-CCC-eeeeeccccCCCCceEEEecCC------C--CCEEE
Confidence 34555542 1123567888889999999999999942 122 33311 01112344421 1 23343
Q ss_pred EEEee--CCCCCCCCCHHHHHHHHHHHHhhhcccCCCceeeeeeEEecCC
Q 018455 297 QADFY--HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPK 344 (355)
Q Consensus 297 ~~~~~--~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~v~~~~~ 344 (355)
+.+. .+..+..++++++++.++++|+++|+.....++..+.+++|..
T Consensus 705 -~~v~G~~a~~l~~lsdeel~~~~l~~L~~ifG~~~~~~P~~~~vtrW~~ 753 (852)
T 2xag_A 705 -ALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRA 753 (852)
T ss_dssp -EEECHHHHHHGGGSCHHHHHHHHHHHHHHHHCTTTCCCCSEEEECCTTT
T ss_pred -EEecCcCHHHHhcCCHHHHHHHHHHHHHHHhCccccCCceEEEEEecCC
Confidence 2222 2345667899999999999999999764334566777777766
No 25
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.36 E-value=1.4e-11 Score=115.70 Aligned_cols=196 Identities=12% Similarity=0.167 Sum_probs=120.3
Q ss_pred CCchHHHHHHHhCCCCCCCccc-ceeec-CCCceecccccccCCCCCCCccccccccCCCCCHHhhhchhhHHHHHhccC
Q 018455 7 PFRNIFSLVDELGIKPFTGWMK-SAQYS-EEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFD 84 (355)
Q Consensus 7 ~y~~~~~l~~elGl~~~~~~~~-~~~~~-~~g~~~~~~~~~~~~~~p~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 84 (355)
.+..+.++++++|+.....+.. ...|. .+|+.+ .+|. +....+....+++.++.++.+++..+....
T Consensus 93 ~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~~g~~~---------~~p~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 161 (453)
T 2bcg_G 93 ANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIY---------KVPA--NEIEAISSPLMGIFEKRRMKKFLEWISSYK 161 (453)
T ss_dssp TTSHHHHHHHHHTGGGTCCEEECCCEEEEETTEEE---------ECCS--SHHHHHHCTTSCHHHHHHHHHHHHHHHHCB
T ss_pred cCcHHHHHHHhcCCccceEEEEccceeEEeCCeEE---------ECCC--ChHHHHhhhccchhhHHHHHHHHHHHHHhc
Confidence 5678999999999975544432 12221 355422 1222 211223344566667766555555444332
Q ss_pred CChh-hhh--hcccccHHHHHHHhCCCHHHHHHHHHHHHHh----hhCCChhhccHHHHHHHHHHHHHhcCCCcceEEec
Q 018455 85 NTDV-AWR--KYDSITARELFKQFGCSERLYRNVIGPLVQV----GLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCR 157 (355)
Q Consensus 85 ~~~~-~~~--~~d~~s~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Sa~~~~~~~~~~~~~~~~~~~~~~~~ 157 (355)
...+ .+. ..+..|+.+|+++++.++.+++ ++...+.. .+...|...++..+..++... .........+++
T Consensus 162 ~~~p~~~~~~~~~~~s~~~~l~~~~~~~~l~~-~l~~~~~l~~~~~~~~~p~~~~~~~~~~~~~s~--~~~~~~~~~~p~ 238 (453)
T 2bcg_G 162 EDDLSTHQGLDLDKNTMDEVYYKFGLGNSTKE-FIGHAMALWTNDDYLQQPARPSFERILLYCQSV--ARYGKSPYLYPM 238 (453)
T ss_dssp TTBGGGSTTCCTTTSBHHHHHHHTTCCHHHHH-HHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHH--HHHSSCSEEEET
T ss_pred cCCchhhhccccccCCHHHHHHHhCCCHHHHH-HHHHHHHhccCccccCCchHHHHHHHHHHHHHH--HhhcCCceEeeC
Confidence 1111 111 2468899999999888888765 44322211 012223333332222222211 111122345899
Q ss_pred CCcchHHHHHHHHHHHHcCcEEEcCceeeEEEec--CCCCeEEEEEeCCeEEecCEEEEccChh
Q 018455 158 GTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYD--EERCCISDVVCGKETYSAGAVVLAVGIS 219 (355)
Q Consensus 158 gg~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~--~~~~~v~~v~~~g~~~~ad~VV~a~p~~ 219 (355)
||+++ ++++|++.+++.|++|+++++|++|..+ + +++++|.++|+++.||.||+|++++
T Consensus 239 gG~~~-l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~--~~~~~V~~~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 239 YGLGE-LPQGFARLSAIYGGTYMLDTPIDEVLYKKDT--GKFEGVKTKLGTFKAPLVIADPTYF 299 (453)
T ss_dssp TCTTH-HHHHHHHHHHHTTCEEECSCCCCEEEEETTT--TEEEEEEETTEEEECSCEEECGGGC
T ss_pred CCHHH-HHHHHHHHHHHcCCEEECCCEEEEEEEECCC--CeEEEEEECCeEEECCEEEECCCcc
Confidence 99998 8899999999999999999999999987 5 5677888899999999999999987
No 26
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.21 E-value=1.6e-10 Score=110.47 Aligned_cols=151 Identities=13% Similarity=0.007 Sum_probs=99.1
Q ss_pred cccccHHHHHHHh------CCCHHHHHHHHHHHHH---hhhCCChhhccHHHHHHHHHHHHHhcCCCcceEEecCCcchH
Q 018455 93 YDSITARELFKQF------GCSERLYRNVIGPLVQ---VGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREK 163 (355)
Q Consensus 93 ~d~~s~~~~l~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~Sa~~~~~~~~~~~~~~~~~~~~~~~~gg~~~~ 163 (355)
.+++|+.+|+.+. ..++.. ..++.+++. ..++.+++++|+.+++. .. .+ ...+++| +++
T Consensus 136 ~~d~s~~~~l~~~l~~~~~~l~~~~-~~~~~~~~~~~~~~~g~~~~~~s~~~~~~-------~~-~~-~~~~~~g-~~~- 203 (516)
T 1rsg_A 136 VSDCSFFQLVMKYLLQRRQFLTNDQ-IRYLPQLCRYLELWHGLDWKLLSAKDTYF-------GH-QG-RNAFALN-YDS- 203 (516)
T ss_dssp --CCBHHHHHHHHHHHHGGGSCHHH-HHHHHHHHGGGHHHHTBCTTTSBHHHHCC-------CC-SS-CCEEESC-HHH-
T ss_pred CCCCCHHHHHHHHHHHhhcccCHHH-HHHHHHHHHHHHHHhCCChHHCChHHHHh-------hc-cC-cchhhhC-HHH-
Confidence 5678999988753 122221 123333332 33567788888775421 11 11 2245667 776
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhhHHH-----------hhhccccc
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQE-----------LIKNSILC 231 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~~~~-----------l~~~~~l~ 231 (355)
+++.|++.+. +++|++|++|++|..+++ +.+ .|++ +|++++||+||+|+|+..++. +...|+++
T Consensus 204 l~~~l~~~l~--~~~i~~~~~V~~I~~~~~-~~v-~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp 279 (516)
T 1rsg_A 204 VVQRIAQSFP--QNWLKLSCEVKSITREPS-KNV-TVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLK 279 (516)
T ss_dssp HHHHHHTTSC--GGGEETTCCEEEEEECTT-SCE-EEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCC
T ss_pred HHHHHHHhCC--CCEEEECCEEEEEEEcCC-CeE-EEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCCC
Confidence 6677765553 368999999999998633 225 5776 677899999999999999874 33444443
Q ss_pred CcHHHHhhccCCcccEEEEEEEEccCCCC
Q 018455 232 NREEFLKVLNLASIDVVSVKLWFDKKVTV 260 (355)
Q Consensus 232 ~~~~~~~~~~l~~~~~~~v~l~~~~~~~~ 260 (355)
....+.++++.+.++.++++.|++++|.
T Consensus 280 -~~~~~ai~~~~~~~~~Kv~l~f~~~fW~ 307 (516)
T 1rsg_A 280 -PVIQDAFDKIHFGALGKVIFEFEECCWS 307 (516)
T ss_dssp -HHHHHHTTSSCCCCCEEEEEEESSCCSC
T ss_pred -HHHHHHHHhCCCCcceEEEEEeCCCCCC
Confidence 2223457888899999999999999994
No 27
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.21 E-value=4.7e-11 Score=118.41 Aligned_cols=176 Identities=18% Similarity=0.215 Sum_probs=112.5
Q ss_pred eEEecCCcchHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhhHHH--hhhccc
Q 018455 153 LVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQE--LIKNSI 229 (355)
Q Consensus 153 ~~~~~gg~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~~~~--l~~~~~ 229 (355)
....++|++. +.+.++ .|++|++|++|++|..++++ + .|++ +|++++||+||+|+|+..+++ +...++
T Consensus 526 ~~~~~~G~~~-l~~aLa-----~gl~I~l~t~V~~I~~~~~~--v-~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~ 596 (776)
T 4gut_A 526 HTLLTPGYSV-IIEKLA-----EGLDIQLKSPVQCIDYSGDE--V-QVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPP 596 (776)
T ss_dssp EEECTTCTHH-HHHHHH-----TTSCEESSCCEEEEECSSSS--E-EEEETTCCEEEESEEEECCCHHHHHTTCSEEESC
T ss_pred eEEECChHHH-HHHHHH-----hCCcEEcCCeeEEEEEcCCE--E-EEEECCCcEEEcCEEEECCCHHHHhhcccccCCC
Confidence 4556788877 444443 37799999999999988753 5 4666 677899999999999999875 334555
Q ss_pred ccCcHHHHhhccCCcccEEEEEEEEccCCCCCCC-CcceeccCC------CccceeeEcccccccccCCCceEEEEEee-
Q 018455 230 LCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNV-SNACSGFGD------SLAWTFFDLNKIYDEHKDDSATVIQADFY- 301 (355)
Q Consensus 230 l~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~g~~l~~~~~- 301 (355)
++. ...+.+..+++.++.++.+.|++++|.... ....++.-. ....++++.+ +. +.+.++...+.
T Consensus 597 Lp~-~~~~ai~~l~~g~~~KV~l~f~~~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d~~---p~---g~~~vL~~~i~G 669 (776)
T 4gut_A 597 LSE-KKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMD---PQ---KKHSVLMSVIAG 669 (776)
T ss_dssp CCH-HHHHHHHHEEEECCEEEEEECSSCTTHHHHTTCSEEEECCSSGGGTTEEEEEEESC---TT---SCSCEEEEEECT
T ss_pred CCH-HHHHHHHhCCCeeEEEEEEecCcccccccCCCCceEEeecCCcCCCceEEEEecCC---CC---CCceEEEEEecc
Confidence 532 223356777888899999999999984110 011222111 1111233321 11 12234433222
Q ss_pred -CCCCCCCCCHHHHHHHHHHHHhhhcccCCCceeeeeeEEecCC
Q 018455 302 -HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPK 344 (355)
Q Consensus 302 -~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~v~~~~~ 344 (355)
.+..+..++++|+++.++++|+++|+......++.+.+++|..
T Consensus 670 ~~a~~l~~lsdeel~~~~l~~L~~ifg~~~~~~P~~~~vt~W~~ 713 (776)
T 4gut_A 670 EAVASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWST 713 (776)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHHHHTTTSCCCCCSEEEECCGGG
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHhCcccccCcceEEEecCCC
Confidence 1234567899999999999999999863334555666666654
No 28
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.17 E-value=3.5e-12 Score=116.47 Aligned_cols=202 Identities=12% Similarity=0.019 Sum_probs=124.9
Q ss_pred cccccCCchHHHHHHHhCCCCCCCcccceeecCCCceecccccccCCCCCCCccccc-cccCCCCCHHhhhchhhHHHHH
Q 018455 2 QGFWYPFRNIFSLVDELGIKPFTGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLF-YTQFSRLPLVDRLTSLPLMAAV 80 (355)
Q Consensus 2 H~~~~~y~~~~~l~~elGl~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~p~~~~~-~~~~~~l~~~~~~~~~~~~~~~ 80 (355)
|+|...+++++++++++|... .+.+......+|+.+ ++|.....+. ++.. .++.+.. +++...
T Consensus 56 ~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~g~~~---------~~p~~~~~~~~l~~~--~~~~~~~---~~l~~~ 119 (367)
T 1i8t_A 56 HIFHTNDKYIWDYVNDLVEFN--RFTNSPLAIYKDKLF---------NLPFNMNTFHQMWGV--KDPQEAQ---NIINAQ 119 (367)
T ss_dssp CCEEESCHHHHHHHHTTSCBC--CCCCCCEEEETTEEE---------ESSBSHHHHHHHHCC--CCHHHHH---HHHHHH
T ss_pred ceecCCCHHHHHHHHHhhhhh--hccccceEEECCeEE---------EcCCCHHHHHHHhcc--CCHHHHH---HHHHHH
Confidence 777888999999999998632 222212222455421 1222222222 2211 1222221 111222
Q ss_pred hccCCChhhhhhcccccHHHHHHHhCCCHHHHHHHHHHHHHhhhCCChhhccHHHHHHHHHHHHHhcCCCc-ce-EEecC
Q 018455 81 IDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNF-DL-VWCRG 158 (355)
Q Consensus 81 ~~~~~~~~~~~~~d~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~~~~~~~~~~~~~~-~~-~~~~g 158 (355)
.. .....++.|+.+|+.++ +++++.+.++.|++.++|+.+|+++|+.++..+.......+.... .. ++++|
T Consensus 120 ~~------~~~~~~~~s~~~~~~~~-~g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~g 192 (367)
T 1i8t_A 120 KK------KYGDKVPENLEEQAISL-VGEDLYQALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVG 192 (367)
T ss_dssp TT------TTCCCCCCSHHHHHHHH-HHHHHHHHHTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTT
T ss_pred hh------ccCCCCCccHHHHHHHH-HhHHHHHHHHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCC
Confidence 11 11124678999999998 899999999999999999999999998755211000000111111 22 38899
Q ss_pred CcchHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChhhHHHhhhcccccCcHHHHh
Q 018455 159 TLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLK 238 (355)
Q Consensus 159 g~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~~~~l~~~~~l~~~~~~~~ 238 (355)
|+++ ++++|++ |++|++|++|++|.. . + .+.||+||+|+|++.+.++ .
T Consensus 193 G~~~-l~~~l~~-----g~~i~l~~~V~~i~~----~-v--------~~~~D~VV~a~p~~~~~~~-------------~ 240 (367)
T 1i8t_A 193 GYTK-LIEKMLE-----GVDVKLGIDFLKDKD----S-L--------ASKAHRIIYTGPIDQYFDY-------------R 240 (367)
T ss_dssp CHHH-HHHHHHT-----TSEEECSCCGGGSHH----H-H--------HTTEEEEEECSCHHHHTTT-------------T
T ss_pred CHHH-HHHHHhc-----CCEEEeCCceeeech----h-h--------hccCCEEEEeccHHHHHHH-------------h
Confidence 9988 6666654 689999999998851 1 2 2468999999999876432 2
Q ss_pred hccCCcccEEEEEEEEccCC
Q 018455 239 VLNLASIDVVSVKLWFDKKV 258 (355)
Q Consensus 239 ~~~l~~~~~~~v~l~~~~~~ 258 (355)
+.+++|.++..+.+.++++.
T Consensus 241 l~~l~y~s~~~v~~~~d~~~ 260 (367)
T 1i8t_A 241 FGALEYRSLKFETERHEFPN 260 (367)
T ss_dssp TCCCCEEEEEEEEEEESSSC
T ss_pred hCCCCCceEEEEEEEecccc
Confidence 34567778888888888764
No 29
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.16 E-value=2e-11 Score=118.85 Aligned_cols=160 Identities=10% Similarity=-0.091 Sum_probs=103.2
Q ss_pred hhcccccH---HHHHHH-hCCCHHHHHHHHHHHHHhhhC-CChhhccHHHHHHHHHHHHHhcCCCcceEEecCCcchHHH
Q 018455 91 RKYDSITA---RELFKQ-FGCSERLYRNVIGPLVQVGLF-APAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIF 165 (355)
Q Consensus 91 ~~~d~~s~---~~~l~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~Sa~~~~~~~~~~~~~~~~~~~~~~~~gg~~~~l~ 165 (355)
.++|+.|+ .+|+++ ..++ ..++ ++.-+..+..+ .+....|+..++.... .. .+.....+.||+++ |+
T Consensus 279 ~~~d~~S~~~~~~~L~~~~~~s-~~~~-~~~~~~~~~gg~~~~~~~S~le~L~~~~----~~-~~~~~~~i~GG~~~-L~ 350 (721)
T 3ayj_A 279 VAFEKGTLPPVDGVLDVDESIS-YYVE-LFGRFGFGTGGFKPLYNISLVEMMRLIL----WD-YSNEYTLPVTENVE-FI 350 (721)
T ss_dssp HHHHHTSSCCGGGTSCHHHHHH-HHHH-HHHHHCSSSSCCGGGTTBBHHHHHHHHH----TT-TTCEECCSSSSTHH-HH
T ss_pred HhhcccchhHHHHHHHhccccH-HHHH-HHHHHhhccCCCCCccchhHHHHHHHHh----cC-CccceeEECCcHHH-HH
Confidence 46788888 888854 1122 2222 23322222222 3445788877665441 21 22345568899998 88
Q ss_pred HHHHHHHHHcCcEEEcCceee--EEEecCCCC-----eEEEE-Ee-CCe--EEecCEEEEccChhhHHH------hh---
Q 018455 166 EPWMDSMRTRGCEFLDGRRVT--DFIYDEERC-----CISDV-VC-GKE--TYSAGAVVLAVGISTLQE------LI--- 225 (355)
Q Consensus 166 ~~l~~~l~~~G~~i~l~~~V~--~I~~~~~~~-----~v~~v-~~-~g~--~~~ad~VV~a~p~~~~~~------l~--- 225 (355)
++|++.+.. |+.|+++++|+ +|.++++++ .| .| .. +|+ +++||+||+|+|+..+.. |-
T Consensus 351 ~aLa~~l~~-g~~I~l~~~V~~~~I~~~~~g~~~~~~~V-~V~~~~~G~~~~~~aD~VIvTvP~~~L~~~~~r~~i~~~~ 428 (721)
T 3ayj_A 351 RNLFLKAQN-VGAGKLVVQVRQERVANACHSGTASARAQ-LLSYDSHNAVHSEAYDFVILAVPHDQLTPIVSRSGFEHAA 428 (721)
T ss_dssp HHHHHHHHH-HTTTSEEEEEECEEEEEEEECSSSSCCEE-EEEEETTCCEEEEEESEEEECSCHHHHHHHHSSSCSSCEE
T ss_pred HHHHHhccc-CCceEeCCEEEeeeEEECCCCCccccceE-EEEEecCCceEEEEcCEEEECCCHHHHhhccccccccccc
Confidence 899887643 67899999999 999976421 25 45 33 465 789999999999998865 22
Q ss_pred ----h--------------ccc-c-c----C--cHHHHhhccCCcccEEEEEEEE-----ccCCCC
Q 018455 226 ----K--------------NSI-L-C----N--REEFLKVLNLASIDVVSVKLWF-----DKKVTV 260 (355)
Q Consensus 226 ----~--------------~~~-l-~----~--~~~~~~~~~l~~~~~~~v~l~~-----~~~~~~ 260 (355)
. .++ + + . ......++++.+.+..|+.+.| ++++|.
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~ 494 (721)
T 3ayj_A 429 SQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWVP 494 (721)
T ss_dssp EEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSC
T ss_pred cccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCccc
Confidence 1 122 2 2 0 1222356888999999999999 899984
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.14 E-value=1.6e-09 Score=97.42 Aligned_cols=178 Identities=13% Similarity=0.098 Sum_probs=116.3
Q ss_pred ecCCcchHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEE-ecCEEEEccChhhHHHhhhcccccCc
Q 018455 156 CRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETY-SAGAVVLAVGISTLQELIKNSILCNR 233 (355)
Q Consensus 156 ~~gg~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~-~ad~VV~a~p~~~~~~l~~~~~l~~~ 233 (355)
...|+.. +.+.+ .+ |++|+++++|++|+.++++ + .|++ +|+.. +||.||+|+|+..+.+++...+
T Consensus 105 ~~~~~~~-l~~~l----~~-g~~i~~~~~v~~i~~~~~~--~-~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~~---- 171 (336)
T 1yvv_A 105 GKPGMSA-ITRAM----RG-DMPVSFSCRITEVFRGEEH--W-NLLDAEGQNHGPFSHVIIATPAPQASTLLAAAP---- 171 (336)
T ss_dssp ESSCTHH-HHHHH----HT-TCCEECSCCEEEEEECSSC--E-EEEETTSCEEEEESEEEECSCHHHHGGGGTTCH----
T ss_pred cCccHHH-HHHHH----Hc-cCcEEecCEEEEEEEeCCE--E-EEEeCCCcCccccCEEEEcCCHHHHHHhhccCH----
Confidence 3466665 43333 33 8899999999999998753 4 4666 56655 4999999999999888764321
Q ss_pred HHHHhhccCCcccEEEEEEEEccCCCCCCCCcceeccCCCccceeeEcccccccccCCCceEEEEEee--CCCCCCCCCH
Q 018455 234 EEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFY--HANELMPLKD 311 (355)
Q Consensus 234 ~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~--~~~~~~~~~~ 311 (355)
.....+..+.+.++.++.+.++++.+.+ ... ++..++++.| +++.+.. |... +.+..+..... .+.++..+++
T Consensus 172 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~-l~~~~~~-p~~~-~~~~~~v~~~~~~~~~~~~~~~~ 246 (336)
T 1yvv_A 172 KLASVVAGVKMDPTWAVALAFETPLQTP-MQG-CFVQDSPLDW-LARNRSK-PERD-DTLDTWILHATSQWSRQNLDASR 246 (336)
T ss_dssp HHHHHHTTCCEEEEEEEEEEESSCCSCC-CCE-EEECSSSEEE-EEEGGGS-TTCC-CSSEEEEEEECHHHHHHTTTSCH
T ss_pred HHHHHHhhcCccceeEEEEEecCCCCCC-CCe-EEeCCCceeE-EEecCcC-CCCC-CCCcEEEEEeCHHHHHHHHhCCH
Confidence 2223567788889999999999987632 222 3333456665 4554332 3221 22122211111 2345667899
Q ss_pred HHHHHHHHHHHhhhcccCCCceeeeeeEEecCCCccccCCC
Q 018455 312 DQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPG 352 (355)
Q Consensus 312 ee~~~~~~~~l~~~~p~~~~~~~~~~~v~~~~~a~~~~~pg 352 (355)
+++.+.+++++.++++.. ...+....+.||.+++|.+..+
T Consensus 247 ~~~~~~l~~~l~~~lg~~-~~~p~~~~~~rw~~a~~~~~~~ 286 (336)
T 1yvv_A 247 EQVIEHLHGAFAELIDCT-MPAPVFSLAHRWLYARPAGAHE 286 (336)
T ss_dssp HHHHHHHHHHHHTTCSSC-CCCCSEEEEEEEEEEEESSCCC
T ss_pred HHHHHHHHHHHHHHhCCC-CCCCcEEEccccCccCCCCCCC
Confidence 999999999999999742 2334556788898888877654
No 31
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.13 E-value=7.6e-12 Score=115.56 Aligned_cols=206 Identities=10% Similarity=-0.006 Sum_probs=123.1
Q ss_pred cccccCCchHHHHHHHhCCCCCCCcccceeecCCCceecccccccCCCCCCCccccc-cccCCCCCHHhhhchhhHHHHH
Q 018455 2 QGFWYPFRNIFSLVDELGIKPFTGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLF-YTQFSRLPLVDRLTSLPLMAAV 80 (355)
Q Consensus 2 H~~~~~y~~~~~l~~elGl~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~p~~~~~-~~~~~~l~~~~~~~~~~~~~~~ 80 (355)
|.|...+++++++++++|+-. .+.....+..+|+.+ ++|.....+. ++... +++ ++++. .+...
T Consensus 65 ~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~G~~~---------~~p~~~~~~~~l~~~~-~~~-~~~~~--~l~~~ 129 (399)
T 1v0j_A 65 HLFHTSNKRVWDYVRQFTDFT--DYRHRVFAMHNGQAY---------QFPMGLGLVSQFFGKY-FTP-EQARQ--LIAEQ 129 (399)
T ss_dssp CCEEESCHHHHHHHTTTCCBC--CCCCCEEEEETTEEE---------EESSSHHHHHHHHTSC-CCH-HHHHH--HHHHH
T ss_pred cEEcCCcHHHHHHHHHhhhhh--ccccceEEEECCEEE---------eCCCCHHHHHHHhccc-CCH-HHHHH--HHHHH
Confidence 677788999999999999832 222222222456432 1222211111 22221 122 22220 11121
Q ss_pred hccCCChhhhhhcccccHHHHHHHhCCCHHHHHHHHHHHHHhhhCCChhhccHHHHHHHHHHHHHhcCCCc-ce-EEecC
Q 018455 81 IDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNF-DL-VWCRG 158 (355)
Q Consensus 81 ~~~~~~~~~~~~~d~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~~~~~~~~~~~~~~-~~-~~~~g 158 (355)
.. .....++.|+.+|+.+. +++++++.++.|++.++++.+++++|+.++..+...+...+.... .. .+++|
T Consensus 130 ~~------~~~~~~~~s~~e~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~g 202 (399)
T 1v0j_A 130 AA------EIDTADAQNLEEKAISL-IGRPLYEAFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTD 202 (399)
T ss_dssp GG------GSCTTC----CCHHHHH-HCHHHHHHHTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTT
T ss_pred hh------ccCCCCcccHHHHHHHH-HhHHHHHHHHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhhhhcccccc
Confidence 11 00124678999999986 899999999999999999999999998765211000000111111 23 37899
Q ss_pred CcchHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEE-ecCEEEEccChhhHHHhhhcccccCcHHHH
Q 018455 159 TLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETY-SAGAVVLAVGISTLQELIKNSILCNREEFL 237 (355)
Q Consensus 159 g~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~-~ad~VV~a~p~~~~~~l~~~~~l~~~~~~~ 237 (355)
|+++ ++++|++ +.|++|++|++|++|..+ | + ++ +||+||+|+|++.+.++.
T Consensus 203 G~~~-l~~~l~~---~~g~~I~l~~~V~~I~~~-----v-----~--~~~~aD~VI~t~p~~~l~~~~------------ 254 (399)
T 1v0j_A 203 GYTA-WLQNMAA---DHRIEVRLNTDWFDVRGQ-----L-----R--PGSPAAPVVYTGPLDRYFDYA------------ 254 (399)
T ss_dssp HHHH-HHHHHTC---STTEEEECSCCHHHHHHH-----H-----T--TTSTTCCEEECSCHHHHTTTT------------
T ss_pred cHHH-HHHHHHh---cCCeEEEECCchhhhhhh-----h-----h--hcccCCEEEECCcHHHHHhhh------------
Confidence 9988 6666654 468899999999998631 2 1 45 699999999999876551
Q ss_pred hhccCCcccEEEEEEEEccCC
Q 018455 238 KVLNLASIDVVSVKLWFDKKV 258 (355)
Q Consensus 238 ~~~~l~~~~~~~v~l~~~~~~ 258 (355)
+.+++|.++..+.+.++.+.
T Consensus 255 -l~~l~y~s~~~~~~~~~~~~ 274 (399)
T 1v0j_A 255 -EGRLGWRTLDFEVEVLPIGD 274 (399)
T ss_dssp -TCCCCEEEEEEEEEEESSSC
T ss_pred -hCCCCcceEEEEEEEEcccc
Confidence 23566777777888887754
No 32
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.09 E-value=2.7e-11 Score=111.24 Aligned_cols=198 Identities=11% Similarity=0.036 Sum_probs=122.3
Q ss_pred CcccccCCchHHHHHHHhCCCCCCCcccceeecCCCceecccccccCCCCCCCccccc-cccCCCCCHHhhhchhhHHHH
Q 018455 1 MQGFWYPFRNIFSLVDELGIKPFTGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLF-YTQFSRLPLVDRLTSLPLMAA 79 (355)
Q Consensus 1 ~H~~~~~y~~~~~l~~elGl~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~p~~~~~-~~~~~~l~~~~~~~~~~~~~~ 79 (355)
.|+|...|++++++++++|.-. .+........+|+.+ ++|.....+. ++... +++.+..+ .+..
T Consensus 59 ~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~g~~~---------~~P~~~~~~~~l~~~~-~~~~~~~~---~l~~ 123 (384)
T 2bi7_A 59 PHIFHTDNETVWNYVNKHAEMM--PYVNRVKATVNGQVF---------SLPINLHTINQFFSKT-CSPDEARA---LIAE 123 (384)
T ss_dssp CCCEEESCHHHHHHHHTTSCEE--ECCCCEEEEETTEEE---------EESCCHHHHHHHTTCC-CCHHHHHH---HHHH
T ss_pred ceEECCCCHHHHHHHHHHhhhc--ccccceEEEECCEEE---------ECCCChhHHHHHhccc-CCHHHHHH---HHHH
Confidence 3778889999999999999621 112111222455421 1222222222 22221 23322211 1112
Q ss_pred HhccCCChhhhhhcccccHHHHHHHhCCCHHHHHHHHHHHHHhhhCCChhhccHHHHHHHHHHHHHhcCC-Ccce-EEec
Q 018455 80 VIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQK-NFDL-VWCR 157 (355)
Q Consensus 80 ~~~~~~~~~~~~~~d~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~~~~~~~~~~~~-~~~~-~~~~ 157 (355)
... . . ..++.|+.+|+.++ +++++++.++.|++.++|+.+|+++|+.++..+...+...+.. .... .+++
T Consensus 124 ~~~----~-~--~~~~~sl~e~~~~~-~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~ 195 (384)
T 2bi7_A 124 KGD----S-T--IADPQTFEEEALRF-IGKELYEAFFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPK 195 (384)
T ss_dssp HSC----C-S--CSSCCBHHHHHHHH-HCHHHHHHHTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEET
T ss_pred hhh----c-c--CCCCcCHHHHHHHh-hcHHHHHHHHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEEC
Confidence 111 1 0 24678999999998 8999999999999999999999999987642110000001111 1122 3899
Q ss_pred CCcchHHHHHHHHHHHHcCcEEEcCceee-EEEecCCCCeEEEEEeCCeEEecCEEEEccChhhHHHhhhcccccCcHHH
Q 018455 158 GTLREKIFEPWMDSMRTRGCEFLDGRRVT-DFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEF 236 (355)
Q Consensus 158 gg~~~~l~~~l~~~l~~~G~~i~l~~~V~-~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~~~~l~~~~~l~~~~~~ 236 (355)
||+++ ++++|++ +.|++|++|++|+ +|.. +||+||+|+|++.+.++.
T Consensus 196 gG~~~-l~~~l~~---~~g~~I~l~~~V~~~i~~-----------------~~d~VI~a~p~~~~~~~~----------- 243 (384)
T 2bi7_A 196 CGYTQ-MIKSILN---HENIKVDLQREFIVEERT-----------------HYDHVFYSGPLDAFYGYQ----------- 243 (384)
T ss_dssp THHHH-HHHHHHC---STTEEEEESCCCCGGGGG-----------------GSSEEEECSCHHHHTTTT-----------
T ss_pred cCHHH-HHHHHHh---cCCCEEEECCeeehhhhc-----------------cCCEEEEcCCHHHHHHhh-----------
Confidence 99988 6666654 4688999999999 7741 289999999999877652
Q ss_pred HhhccCCcccEEEEEEEEc
Q 018455 237 LKVLNLASIDVVSVKLWFD 255 (355)
Q Consensus 237 ~~~~~l~~~~~~~v~l~~~ 255 (355)
+..++|.+...+.+.+|
T Consensus 244 --lg~l~y~s~~~v~~~~d 260 (384)
T 2bi7_A 244 --YGRLGYRTLDFKKFTYQ 260 (384)
T ss_dssp --TCCCCEEEEEEEEEEEE
T ss_pred --cCCCCcceEEEEEEEeC
Confidence 22456667777777777
No 33
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.08 E-value=2.1e-11 Score=111.65 Aligned_cols=200 Identities=9% Similarity=0.032 Sum_probs=125.6
Q ss_pred cccccCCchHHHHHHHhCCCCCCCcccceeecCCCceecccccccCCCCCCCccccc-cccCCCCCHHhhhchhhHHHHH
Q 018455 2 QGFWYPFRNIFSLVDELGIKPFTGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLF-YTQFSRLPLVDRLTSLPLMAAV 80 (355)
Q Consensus 2 H~~~~~y~~~~~l~~elGl~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~p~~~~~-~~~~~~l~~~~~~~~~~~~~~~ 80 (355)
|.|...++.++++++++|... .+.+......+|+.+ ++|..++.+. ++.. .+++.....++. .
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~l~---------~lP~~~~~~~~l~~~-~~~~~~~~~~l~---~- 148 (397)
T 3hdq_A 85 HIFHTNSKDVFEYLSRFTEWR--PYQHRVLASVDGQLL---------PIPINLDTVNRLYGL-NLTSFQVEEFFA---S- 148 (397)
T ss_dssp CCCEESCHHHHHHHHTSCCEE--ECCCBEEEEETTEEE---------EESCCHHHHHHHHTC-CCCHHHHHHHHH---H-
T ss_pred cccCCChHHHHHHHHHhhhcc--cccccceEEECCEEE---------EcCCChHHHHHhhcc-CCCHHHHHHHHh---h-
Confidence 778889999999999999532 111211222456532 2333332222 2221 233333222211 1
Q ss_pred hccCCChhhhhhcccccHHHHHHHhCCCHHHHHHHHHHHHHhhhCCChhhccHHHHHHHHHHHHH-hcCC-Ccce-EEec
Q 018455 81 IDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIIL-AHQK-NFDL-VWCR 157 (355)
Q Consensus 81 ~~~~~~~~~~~~~d~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~~~~~~~~-~~~~-~~~~-~~~~ 157 (355)
. .+...+++|+.+|+.++ +++++++.|+.|++.++|+.+++++|+.++.. +..... .... ...+ ++|+
T Consensus 149 ~-------~~~~~~~~s~~e~~~~~-~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~R-vp~~~~~d~~yf~~~~qg~P~ 219 (397)
T 3hdq_A 149 V-------AEKVEQVRTSEDVVVSK-VGRDLYNKFFRGYTRKQWGLDPSELDASVTAR-VPTRTNRDNRYFADTYQAMPL 219 (397)
T ss_dssp H-------CCCCSSCCBHHHHHHHH-HHHHHHHHHTHHHHHHHHSSCGGGSBTTTGGG-SCCCSSCCCBSCCCSEEEEET
T ss_pred c-------ccCCCCCcCHHHHHHHh-cCHHHHHHHHHHHhCchhCCCHHHHHHHHHHh-cCcccccCccchhhhheeccC
Confidence 0 11236789999999987 89999999999999999999999999875532 211000 0000 1122 4799
Q ss_pred CCcchHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChhhHHHhhhcccccCcHHHH
Q 018455 158 GTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFL 237 (355)
Q Consensus 158 gg~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~~~~l~~~~~l~~~~~~~ 237 (355)
||.++ +.+.|+ ++.|++|++|++|+++ +.++.+|+||+|+|.+.+...
T Consensus 220 gGy~~-l~e~l~---~~~g~~V~l~~~v~~~---------------~~~~~~d~vI~T~P~d~~~~~------------- 267 (397)
T 3hdq_A 220 HGYTR-MFQNML---SSPNIKVMLNTDYREI---------------ADFIPFQHMIYTGPVDAFFDF------------- 267 (397)
T ss_dssp TCHHH-HHHHHT---CSTTEEEEESCCGGGT---------------TTTSCEEEEEECSCHHHHTTT-------------
T ss_pred CCHHH-HHHHHH---hccCCEEEECCeEEec---------------cccccCCEEEEcCCHHHHHHH-------------
Confidence 99887 555553 4569999999999843 123458999999998766211
Q ss_pred hhccCCcccEEEEEEEEccCC
Q 018455 238 KVLNLASIDVVSVKLWFDKKV 258 (355)
Q Consensus 238 ~~~~l~~~~~~~v~l~~~~~~ 258 (355)
.+.++++.++..+.+.++.+.
T Consensus 268 ~~g~L~yrsl~~~~~~~~~~~ 288 (397)
T 3hdq_A 268 CYGKLPYRSLEFRHETHDTEQ 288 (397)
T ss_dssp TTCCCCEEEEEEEEEEESSSC
T ss_pred hcCCCCCceEEEEEEEecccc
Confidence 234677778888888898653
No 34
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.75 E-value=0.00011 Score=66.64 Aligned_cols=114 Identities=11% Similarity=0.052 Sum_probs=67.8
Q ss_pred hhhcccccHHHHHH-HhCCCHHHHHHHHHHHHHhhhCCChhhccHHHHHHHHHHHHHhcCCCcceEEecCCcchHHHHHH
Q 018455 90 WRKYDSITARELFK-QFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPW 168 (355)
Q Consensus 90 ~~~~d~~s~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~~~~~~~~~~~~~~~~~~~~gg~~~~l~~~l 168 (355)
.+++|++|+.+||+ +.++++.+++.+ ..++ -+. ...+.|+..++.... ....+....-+.||+++ |+++|
T Consensus 256 ~~~lD~~S~~~~L~~~~g~s~~~~~~~-~~~~--~~~-~~~~~s~l~~l~~~~----~~~~~~~~~~i~GG~~~-l~~~l 326 (376)
T 2e1m_A 256 VRDFDGYSMGRFLREYAEFSDEAVEAI-GTIE--NMT-SRLHLAFFHSFLGRS----DIDPRATYWEIEGGSRM-LPETL 326 (376)
T ss_dssp HHHHTTCBHHHHHHHTSCCCHHHHHHH-HHHT--TCT-TTTTSBHHHHHHHCS----CSCTTCCEEEETTCTTH-HHHHH
T ss_pred HHHHhCCCHHHHHhhccCCCHHHHHHH-Hhhc--Ccc-ccchhhHHHHHHHhh----hhccCCceEEECCcHHH-HHHHH
Confidence 34679999999999 788999887644 3332 122 223667665543210 11122334557899998 88888
Q ss_pred HHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccC
Q 018455 169 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVG 217 (355)
Q Consensus 169 ~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p 217 (355)
++.+ +.+|++|++|++|...++| +..+..+......-+|.++|-
T Consensus 327 ~~~l---~~~i~l~~~V~~I~~~~~g--v~v~~~~~~~~~g~~~~~~~~ 370 (376)
T 2e1m_A 327 AKDL---RDQIVMGQRMVRLEYYDPG--RDGHHGELTGPGGPAVAIQTV 370 (376)
T ss_dssp HHHG---GGTEECSEEEEEEEECCCC---------------CCEEEEEE
T ss_pred HHhc---CCcEEecCeEEEEEECCCc--eEEEeCCCcCCCCCeeEEEec
Confidence 8766 5689999999999998764 432222222334556766553
No 35
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.73 E-value=2.4e-05 Score=59.14 Aligned_cols=107 Identities=10% Similarity=0.011 Sum_probs=53.3
Q ss_pred eEEecCEEEEccChhhHHHhhhcccccCcHHHHhhccCCcccEEEEEEEEccCCCCCCCCcceeccCCCccceeeEcccc
Q 018455 205 ETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKI 284 (355)
Q Consensus 205 ~~~~ad~VV~a~p~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (355)
++++||+||||+|+.+++.+.+.|+|+. ...+.+++++++...|+.+.|++++|.. .+ .. ++.+.
T Consensus 4 ~~~~Ad~VIvTvP~~vL~~I~F~P~LP~-~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~--~~-~~----------gd~s~- 68 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLRFVKVTPPFSY-KKRRAVIETHYDQATKVLLEFSRRWWEF--TE-AD----------WKREL- 68 (130)
T ss_dssp EEEEESEEEECSCHHHHTTSEEESCCCH-HHHHHHHHCCEECEEEEEEEESSCGGGC--CH-HH----------HHHHH-
T ss_pred eEEEcCEEEEcCCHHHHhcCcCCCCCCH-HHHHHHHhCCCcceeEEEEEECCCCCCC--CC-cc----------ccccC-
Confidence 5789999999999999999888877752 2223567888999999999999999941 11 10 11111
Q ss_pred cccccCCCceEEEEE-ee-CCCCCCCCCHHHHHHHHHHHHhhhcccCC
Q 018455 285 YDEHKDDSATVIQAD-FY-HANELMPLKDDQVVAKAVSYLSKCIKDFS 330 (355)
Q Consensus 285 ~~~~~~~~g~~l~~~-~~-~~~~~~~~~~ee~~~~~~~~l~~~~p~~~ 330 (355)
.+. ..+.++.++ +. .+.+|..++. |..+.++..|.+++|+.+
T Consensus 69 ~~~---~pg~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~~~ 112 (130)
T 2e1m_B 69 DAI---APGLYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPSVD 112 (130)
T ss_dssp HHH---STTHHHHHHHHCCCSCCCC-----------------------
T ss_pred CCC---CCeEEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCCCc
Confidence 011 123222111 12 2346777766 456778889999999754
No 36
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=97.57 E-value=0.0015 Score=58.69 Aligned_cols=55 Identities=13% Similarity=0.131 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CC--eEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK--ETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g--~~~~ad~VV~a~p~~~ 220 (355)
+.+.|.+.+++.|++|+++++|++|+.+++ + ++.|.+ +| .+++||.||+|+.++.
T Consensus 152 ~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~-~-~~~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 152 LMLAYQGDAESDGAQLVFHTPLIAGRVRPE-G-GFELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECTT-S-SEEEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHCCCEEECCCEEEEEEEcCC-c-eEEEEECCCceeEEEeCEEEECCCcch
Confidence 678888889999999999999999999865 2 235766 45 4899999999999984
No 37
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.40 E-value=0.0053 Score=55.48 Aligned_cols=54 Identities=19% Similarity=0.265 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.|.+.+++.|++|+++++|++|..+++ ++ +|.+++++++||.||+|+.++.
T Consensus 166 ~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~--~~-~v~~~~g~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 166 VCKAYVKAAKMLGAEIFEHTPVLHVERDGE--AL-FIKTPSGDVWANHVVVASGVWS 219 (382)
T ss_dssp HHHHHHHHHHHTTCEEETTCCCCEEECSSS--SE-EEEETTEEEEEEEEEECCGGGT
T ss_pred HHHHHHHHHHHCCCEEEcCCcEEEEEEECC--EE-EEEcCCceEEcCEEEECCChhH
Confidence 667888888889999999999999998764 35 6777656899999999999874
No 38
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=97.30 E-value=0.00062 Score=63.06 Aligned_cols=56 Identities=20% Similarity=0.326 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHcCcEEEcCc---eeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhhH
Q 018455 164 IFEPWMDSMRTRGCEFLDGR---RVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTL 221 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~---~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~~ 221 (355)
+.+.|.+.+++.|++|++++ +|++|..++ +++.+|++ +|++++||.||+|+.++..
T Consensus 163 ~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~--~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 163 ALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN--NDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp HHHHHHHHHHHTTCEEEESTTTTCEEEEEEET--TEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred HHHHHHHHHHhcCCEEEeCCcCceEEEEEecC--CeEEEEEECCCCEEECCEEEECCCCChh
Confidence 66788888989999999999 999999876 45777888 5679999999999999853
No 39
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.30 E-value=0.01 Score=56.86 Aligned_cols=55 Identities=31% Similarity=0.315 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-C---C--eEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G---K--ETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~---g--~~~~ad~VV~a~p~~~ 220 (355)
+...+++.+++.|++|+++++|++|..++ +++++|++ + | .+++||.||.|+.++.
T Consensus 172 l~~~L~~~a~~~G~~i~~~~~V~~l~~~~--g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 172 LTLEIMKEAVARGAVALNYMKVESFIYDQ--GKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHTTCEEEESEEEEEEEEET--TEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHcCCEEEcCCEEEEEEEcC--CeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 66788888888999999999999999977 45777875 2 3 4789999999999975
No 40
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.08 E-value=0.00099 Score=60.22 Aligned_cols=54 Identities=17% Similarity=0.285 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.|.+.+++.|++|+++++|++|+.+++ + ++|.+++++++||.||+|+.++.
T Consensus 156 ~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~--~-~~V~t~~g~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 156 LHQGYLRGIRRNQGQVLCNHEALEIRRVDG--A-WEVRCDAGSYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHTTCEEESSCCCCEEEEETT--E-EEEECSSEEEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEEEeCC--e-EEEEeCCCEEEcCEEEECCChhH
Confidence 678888889899999999999999998874 3 46888666999999999999875
No 41
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.00 E-value=0.04 Score=52.77 Aligned_cols=55 Identities=16% Similarity=0.193 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe----CCe--EEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~--~~~ad~VV~a~p~~~ 220 (355)
+...+.+.+++.|++|+.+++|++|..++ +++++|++ +|+ +++||.||.|+.++.
T Consensus 190 l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~--~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 190 LVIDNIKKAAEDGAYLVSKMKAVGFLYEG--DQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHHHHcCCeEEeccEEEEEEEeC--CEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 55677777888999999999999999876 45777774 333 799999999999985
No 42
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.90 E-value=0.0028 Score=57.34 Aligned_cols=55 Identities=20% Similarity=0.236 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.|.+.+++.|++|+.+++|++|+.++ +++.+|.+++++++||.||+|+.++.
T Consensus 151 l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~--~~v~gv~~~~g~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 151 ATTAFAVKAKEYGAKLLEYTEVKGFLIEN--NEIKGVKTNKGIIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEETTEEEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHCCCEEECCceEEEEEEEC--CEEEEEEECCcEEECCEEEECcchhH
Confidence 66778888888999999999999999876 34766877656899999999999875
No 43
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=96.83 E-value=0.0035 Score=58.24 Aligned_cols=65 Identities=15% Similarity=0.264 Sum_probs=50.9
Q ss_pred EEecCCcchHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhh
Q 018455 154 VWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (355)
Q Consensus 154 ~~~~gg~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~ 220 (355)
.++..+....+.+.|.+.+++.|++|+++++|++|..++ +++++|.+ +|++++||.||+|+....
T Consensus 126 ~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~--~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 126 MFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYEN--GQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp EEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred EECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC--CcEEEEEECCCCEEECCEEEECCCCCc
Confidence 344333333477889988988999999999999999876 45677887 566799999999998765
No 44
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=96.73 E-value=0.0038 Score=57.96 Aligned_cols=60 Identities=25% Similarity=0.354 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEe---------------cCCCCeEEEEEeCCeEE--ecCEEEEccChhhHHHhhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIY---------------DEERCCISDVVCGKETY--SAGAVVLAVGISTLQELIK 226 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~---------------~~~~~~v~~v~~~g~~~--~ad~VV~a~p~~~~~~l~~ 226 (355)
+.+.|.+.+++.|++|+.+++|++|+. ++ +++++|.++++++ +||.||+|+.++.. +|+.
T Consensus 183 l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~--~~v~~V~t~~g~i~~~Ad~VV~AtG~~s~-~l~~ 259 (448)
T 3axb_A 183 VVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQE--ARASAAVLSDGTRVEVGEKLVVAAGVWSN-RLLN 259 (448)
T ss_dssp HHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSC--EEEEEEEETTSCEEEEEEEEEECCGGGHH-HHHG
T ss_pred HHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCC--CceEEEEeCCCEEeecCCEEEECCCcCHH-HHHH
Confidence 677888888899999999999999998 44 4576787754478 99999999999853 4443
No 45
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=96.69 E-value=0.0037 Score=56.99 Aligned_cols=55 Identities=24% Similarity=0.267 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.|.+.+++.|++|+++++|++|..++ +++++|.+++++++||.||+|+.++.
T Consensus 176 ~~~~l~~~~~~~g~~i~~~~~v~~i~~~~--~~~~~v~~~~g~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 176 VAWAFARKANEMGVDIIQNCEVTGFIKDG--EKVTGVKTTRGTIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEETTCCEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHCCCEEEcCCeEEEEEEeC--CEEEEEEeCCceEECCEEEECCchhH
Confidence 66788888888999999999999999876 44777887544899999999999875
No 46
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=96.68 E-value=0.004 Score=59.26 Aligned_cols=55 Identities=29% Similarity=0.315 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.|.+.+++.|++|+++++|++|..++ +++++|++ +|++++||.||+|+....
T Consensus 222 l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~--~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 222 MIEKMRATIIELGGEIRFSTRVDDLHMED--GQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHTTCEEESSCCEEEEEESS--SBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEEeC--CEEEEEEECCCCEEECCEEEECCCCCh
Confidence 66778888888999999999999999877 44777887 577899999999998875
No 47
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=96.61 E-value=0.0056 Score=56.02 Aligned_cols=54 Identities=24% Similarity=0.288 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|++|..++ +++.+|.+ +|++++||.||+|+...
T Consensus 186 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~~V~~~dG~~i~aD~Vv~a~G~~ 240 (404)
T 3fg2_P 186 ISSYFHDRHSGAGIRMHYGVRATEIAAEG--DRVTGVVLSDGNTLPCDLVVVGVGVI 240 (404)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTSCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHhCCcEEEECCEEEEEEecC--CcEEEEEeCCCCEEEcCEEEECcCCc
Confidence 66778888899999999999999999876 45777877 67899999999999764
No 48
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=96.61 E-value=0.0054 Score=56.35 Aligned_cols=54 Identities=19% Similarity=0.264 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|++|..++ +++.+|.+ +|++++||.||+|+...
T Consensus 196 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~~v~l~dG~~i~aD~Vv~a~G~~ 250 (415)
T 3lxd_A 196 LSEFYQAEHRAHGVDLRTGAAMDCIEGDG--TKVTGVRMQDGSVIPADIVIVGIGIV 250 (415)
T ss_dssp HHHHHHHHHHHTTCEEEETCCEEEEEESS--SBEEEEEESSSCEEECSEEEECSCCE
T ss_pred HHHHHHHHHHhCCCEEEECCEEEEEEecC--CcEEEEEeCCCCEEEcCEEEECCCCc
Confidence 66778888899999999999999999866 45767877 68899999999999764
No 49
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=96.55 E-value=0.0057 Score=55.07 Aligned_cols=54 Identities=19% Similarity=0.389 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.|.+.+++.|++|+.+++|++|+.++++ + .|.+++++++||.||+|+.++.
T Consensus 151 l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~--~-~v~~~~g~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 151 AIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG--V-TIETADGEYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECSSS--E-EEEESSCEEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE--E-EEEECCCeEEcCEEEEcCCccH
Confidence 6678888888899999999999999987642 4 5777555699999999999875
No 50
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=96.52 E-value=0.0065 Score=54.98 Aligned_cols=54 Identities=19% Similarity=0.416 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.|.+.+++.|++|+.+++|++|+.++++ + .|.+++++++||.||+|+.++.
T Consensus 152 ~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~--~-~v~~~~g~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 152 CIRAYRELAEARGAKVLTHTRVEDFDISPDS--V-KIETANGSYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECSSC--E-EEEETTEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHCCCEEEcCcEEEEEEecCCe--E-EEEeCCCEEEeCEEEEecCccH
Confidence 6678888888899999999999999987642 4 5777767899999999999875
No 51
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=96.51 E-value=0.0062 Score=61.25 Aligned_cols=55 Identities=15% Similarity=0.155 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.|.+.+++.|++|+++++|++|+.++ +++++|.+++++++||.||+|+.++.
T Consensus 153 l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~--~~v~~V~t~~G~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 153 AVQLLIKRTESAGVTYRGSTTVTGIEQSG--GRVTGVQTADGVIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTEEEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHcCCEEECCceEEEEEEeC--CEEEEEEECCcEEECCEEEECCccch
Confidence 66888888989999999999999999876 44767888766899999999999986
No 52
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.49 E-value=0.0057 Score=60.05 Aligned_cols=54 Identities=17% Similarity=0.295 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.|.+.+++.|++|+++++|++|+.+++ ++ .|.+ +|+++.||.||+|+..+.
T Consensus 419 l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~--~v-~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 419 LTRNVLELAQQQGLQIYYQYQLQNFSRKDD--CW-LLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHHTTCEEEESCCEEEEEEETT--EE-EEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHHhCCCEEEeCCeeeEEEEeCC--eE-EEEECCCCEEECCEEEECCCcch
Confidence 677888888889999999999999999874 35 6777 567899999999999874
No 53
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.47 E-value=0.0086 Score=56.64 Aligned_cols=56 Identities=21% Similarity=0.300 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe--CCe--EEecC-EEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAG-AVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~g~--~~~ad-~VV~a~p~~~ 220 (355)
+.+.|.+.+++.|++|+++++|++|..+++ |+|++|.+ +++ ++.|| .||+|+....
T Consensus 204 l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~-g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 204 LMKPLVETAEKLGVRAEYDMRVQTLVTDDT-GRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEECTT-CCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHcCCEEEecCEeEEEEECCC-CcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 778899999889999999999999999844 56888876 443 58996 9999998765
No 54
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=96.46 E-value=0.0078 Score=55.33 Aligned_cols=62 Identities=18% Similarity=0.292 Sum_probs=49.4
Q ss_pred EecCCcchHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChhh
Q 018455 155 WCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (355)
Q Consensus 155 ~~~gg~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~ 220 (355)
++...... +.+.|.+.+++.|++|+++++|++|..+++ .+ .|.+++++++||.||+|+....
T Consensus 126 ~~~~~~~~-l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~--~~-~V~~~~g~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 126 FCDHSAKD-IIRMLMAEMKEAGVQLRLETSIGEVERTAS--GF-RVTTSAGTVDAASLVVASGGKS 187 (417)
T ss_dssp EESSCHHH-HHHHHHHHHHHHTCEEECSCCEEEEEEETT--EE-EEEETTEEEEESEEEECCCCSS
T ss_pred eeCCCHHH-HHHHHHHHHHHCCCEEEECCEEEEEEEeCC--EE-EEEECCcEEEeeEEEECCCCcc
Confidence 34333344 778898889889999999999999998774 24 6777656999999999999865
No 55
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=96.46 E-value=0.0063 Score=55.38 Aligned_cols=54 Identities=30% Similarity=0.468 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.|.+.+++.|++|+++++|++|+.+++ .+ .|.+++++++||.||+|+.++.
T Consensus 155 ~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~--~v-~v~t~~g~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 155 TLAALFTLAQAAGATLRAGETVTELVPDAD--GV-SVTTDRGTYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHTTCEEEESCCEEEEEEETT--EE-EEEESSCEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHcCCEEECCCEEEEEEEcCC--eE-EEEECCCEEEcCEEEEcCCcCh
Confidence 567788888889999999999999998764 35 4767666899999999999874
No 56
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.39 E-value=0.0062 Score=59.88 Aligned_cols=54 Identities=11% Similarity=0.104 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCe-EEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE-TYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~-~~~ad~VV~a~p~~~ 220 (355)
+.+.|.+.+++.|++|+++++|++|+.++++ + .|.+ +|+ +++||.||+|+..+.
T Consensus 414 l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~--v-~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 414 LTHALMMLAQQNGMTCHYQHELQRLKRIDSQ--W-QLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHHHTTCEEEESCCEEEEEECSSS--E-EEEEC-CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHHHHhCCCEEEeCCeEeEEEEeCCe--E-EEEeCCCcEEEECCEEEECCCcch
Confidence 6788888888899999999999999998753 4 6777 456 899999999999874
No 57
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.16 E-value=0.011 Score=54.90 Aligned_cols=54 Identities=13% Similarity=0.201 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|++|..++ +++..|.++|++++||.||+|++..
T Consensus 193 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~v~~v~~~g~~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 193 FTDILAKDYEAHGVNLVLGSKVAAFEEVD--DEIITKTLDGKEIKSDIAILCIGFR 246 (452)
T ss_dssp HHHHHHHHHHHTTCEEEESSCEEEEEEET--TEEEEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHCCCEEEcCCeeEEEEcCC--CeEEEEEeCCCEEECCEEEECcCCC
Confidence 66778888999999999999999998654 4465566688899999999999754
No 58
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.16 E-value=0.015 Score=55.78 Aligned_cols=58 Identities=19% Similarity=0.230 Sum_probs=47.0
Q ss_pred hHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe---CCe--EEecCEEEEccChhh
Q 018455 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIST 220 (355)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~---~g~--~~~ad~VV~a~p~~~ 220 (355)
..+.+.|.+.+++.|++|+++++|++|..+++ ++|++|.+ +|+ ++.||.||+|+....
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~-g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDK-GTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTT-SCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCC-CeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 33678888888889999999999999998764 45777754 465 689999999998754
No 59
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=95.98 E-value=0.013 Score=53.03 Aligned_cols=55 Identities=11% Similarity=0.033 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe----CCeEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.|.+.+++.|++|+.+++|++|+.++ +++.+|++ ++++++||.||.|+..+.
T Consensus 104 l~~~L~~~~~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 104 FDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHhCCCEEEECCEEEEEEEeC--CEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 55678888888899999999999999886 45766766 346899999999998875
No 60
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=95.94 E-value=0.017 Score=55.38 Aligned_cols=58 Identities=19% Similarity=0.275 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe---CCe--EEecCEEEEccChhh
Q 018455 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIST 220 (355)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~---~g~--~~~ad~VV~a~p~~~ 220 (355)
..+.+.|.+.+++.|++|+++++|++|..+++ ++|++|.+ +|+ +++||.||+|+....
T Consensus 250 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~-g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 250 PEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDD-HSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHHHHTTCCEECSEEEEEEEECTT-SBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEECCC-CcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 33678888888889999999999999998763 35777764 565 689999999998765
No 61
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=95.89 E-value=0.022 Score=54.63 Aligned_cols=59 Identities=22% Similarity=0.231 Sum_probs=45.8
Q ss_pred chHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe---CCe--EEecCEEEEccChhh
Q 018455 161 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIST 220 (355)
Q Consensus 161 ~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~---~g~--~~~ad~VV~a~p~~~ 220 (355)
+..+.+.|.+.+++.|++|+++++|++|..+++ ++|++|.+ +|+ ++.||.||+|+....
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~-g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 254 GAHVAQVLWDNAVKRGTDIRLNSRVVRILEDAS-GKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEC---CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHHcCCeEEecCEEEEEEECCC-CeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 334678888888889999999999999988753 34777765 464 689999999998654
No 62
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=95.74 E-value=0.027 Score=51.45 Aligned_cols=54 Identities=13% Similarity=0.107 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEec----CCCCeEEEEEeCCeEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYD----EERCCISDVVCGKETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~----~~~~~v~~v~~~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.+.+.+++.|++|+++++|++|..+ ++ .+ .|.+++++++||.||+|+....
T Consensus 111 l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~--~~-~v~~~~g~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 111 IVEMLKSECDKYGAKILLRSEVSQVERIQNDEKV--RF-VLQVNSTQWQCKNLIVATGGLS 168 (401)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSC--CE-EEEETTEEEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCC--eE-EEEECCCEEECCEEEECCCCcc
Confidence 6788888888899999999999999976 42 34 5777666899999999997765
No 63
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=95.69 E-value=0.025 Score=47.27 Aligned_cols=54 Identities=15% Similarity=0.063 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHc-CcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~-G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.+.+.+++. |++|+ +++|++|..++ +++++|.+ +|++++||.||.|+....
T Consensus 70 ~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~--~~v~~v~~~~g~~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 70 FHARAKYLLEGLRPLHLF-QATATGLLLEG--NRVVGVRTWEGPPARGEKVVLAVGSFL 125 (232)
T ss_dssp HHHHHHHHHHTCTTEEEE-ECCEEEEEEET--TEEEEEEETTSCCEECSEEEECCTTCS
T ss_pred HHHHHHHHHHcCCCcEEE-EeEEEEEEEeC--CEEEEEEECCCCEEECCEEEECCCCCh
Confidence 556677778876 88998 68999999876 45767777 567899999999998854
No 64
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=95.68 E-value=0.033 Score=51.64 Aligned_cols=56 Identities=23% Similarity=0.254 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe----CCe--EEecCEEEEccChhhH
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGISTL 221 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~--~~~ad~VV~a~p~~~~ 221 (355)
+.+.|.+.+.+.|++|+++++|++|..++ +++++|++ +|+ +++||.||.|+.....
T Consensus 102 l~~~L~~~a~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~ 163 (453)
T 3atr_A 102 YNQRVLKEAQDRGVEIWDLTTAMKPIFED--GYVKGAVLFNRRTNEELTVYSKVVVEATGYSRS 163 (453)
T ss_dssp HHHHHHHHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTTEEEEEECSEEEECCGGGCT
T ss_pred HHHHHHHHHHHcCCEEEeCcEEEEEEEEC--CEEEEEEEEEcCCCceEEEEcCEEEECcCCchh
Confidence 56778888888899999999999999876 44655654 565 7999999999998753
No 65
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=95.65 E-value=0.029 Score=51.74 Aligned_cols=54 Identities=20% Similarity=0.383 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEe--cCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIY--DEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~--~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|++|.. ++ +++.+|.+ +|++++||.||+|++..
T Consensus 193 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~--~~v~~v~~~~G~~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 193 VSAFYEHLHREAGVDIRTGTQVCGFEMSTDQ--QKVTAVLCEDGTRLPADLVIAGIGLI 249 (431)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEEECTTT--CCEEEEEETTSCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHhCCeEEEeCCEEEEEEeccCC--CcEEEEEeCCCCEEEcCEEEECCCCC
Confidence 566778888899999999999999987 44 34656777 67889999999999753
No 66
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=95.61 E-value=0.025 Score=52.55 Aligned_cols=56 Identities=11% Similarity=0.112 Sum_probs=45.1
Q ss_pred chHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChh
Q 018455 161 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (355)
Q Consensus 161 ~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~ 219 (355)
..-+.+.+.+.+++.|++|+++++|++|+.+++ ++ .|.+++++++||.||+|++..
T Consensus 188 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~v-~v~~~~g~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 188 DKEMVAEVQKSLEKQAVIFHFEETVLGIEETAN--GI-VLETSEQEISCDSGIFALNLH 243 (452)
T ss_dssp CHHHHHHHHHHHHTTTEEEEETCCEEEEEECSS--CE-EEEESSCEEEESEEEECSCCB
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEccCC--eE-EEEECCCEEEeCEEEECcCCC
Confidence 333667788889999999999999999997663 36 677765599999999998753
No 67
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=95.59 E-value=0.034 Score=51.91 Aligned_cols=55 Identities=20% Similarity=0.265 Sum_probs=44.7
Q ss_pred hHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
.-+.+.+.+.+++.|++|+++++|++|+.++ +++. |.+ +|++++||.||+|+...
T Consensus 202 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~-v~~~~g~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 202 KSLSQMLRHDLEKNDVVVHTGEKVVRLEGEN--GKVA-RVITDKRTLDADLVILAAGVS 257 (472)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEE-EEEESSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEccC--CeEE-EEEeCCCEEEcCEEEECCCCC
Confidence 3366778888999999999999999998865 3454 544 78899999999999864
No 68
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=95.59 E-value=0.03 Score=52.72 Aligned_cols=54 Identities=19% Similarity=0.142 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe----CCe--EEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~--~~~ad~VV~a~p~~~ 220 (355)
+...+.+.+++.|++|+.+++|++|..+++ +++|++ +|+ +++||.||.|+.++.
T Consensus 151 l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~---~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 151 LVLANAQMVVRKGGEVLTRTRATSARRENG---LWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEETT---EEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHcCCEEEcCcEEEEEEEeCC---EEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 667888888889999999999999998752 557765 454 789999999999985
No 69
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=95.57 E-value=0.031 Score=44.52 Aligned_cols=53 Identities=15% Similarity=0.099 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.+.+.+++.|++|+++ +|++|+.++++ + .|.+++++++||.||+|+....
T Consensus 58 ~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~--~-~v~~~~g~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 58 LLRRLEAHARRYGAEVRPG-VVKGVRDMGGV--F-EVETEEGVEKAERLLLCTHKDP 110 (180)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CCCEEEECSSS--E-EEECSSCEEEEEEEEECCTTCC
T ss_pred HHHHHHHHHHHcCCEEEeC-EEEEEEEcCCE--E-EEEECCCEEEECEEEECCCCCC
Confidence 6677788888899999999 99999987642 3 5766433899999999998763
No 70
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=95.50 E-value=0.035 Score=50.74 Aligned_cols=56 Identities=14% Similarity=0.112 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCe--EEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE--TYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~--~~~ad~VV~a~p~~~ 220 (355)
+.+.|.+.+++.|++|+.+++|++|+.+++ +.++.|.+ +|+ +++||.||.|+....
T Consensus 108 ~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~-~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 108 FDKTLADEAARQGVDVEYEVGVTDIKFFGT-DSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHHTCEEECSEEEEEEEEETT-EEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHHHHHhCCCEEEcCCEEEEEEEeCC-EEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 567788888888999999999999998875 32334554 565 699999999998875
No 71
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=95.47 E-value=0.044 Score=52.68 Aligned_cols=57 Identities=12% Similarity=0.218 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeC----------------CeEEecCEEEEccChhhH
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG----------------KETYSAGAVVLAVGISTL 221 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~----------------g~~~~ad~VV~a~p~~~~ 221 (355)
+.+.|.+.+++.|++|+.+++|++|..+++ |+|++|.+. |.+++||.||.|......
T Consensus 146 l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~-g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 146 LVSWMGEQAEALGVEVYPGYAAAEILFHED-GSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp HHHHHHHHHHHTTCEEETTCCEEEEEECTT-SSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred HHHHHHHHHHHcCCEEEcCCEEEEEEEcCC-CCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 667788888888999999999999998765 457667663 257999999999998753
No 72
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=95.46 E-value=0.023 Score=53.63 Aligned_cols=59 Identities=14% Similarity=0.112 Sum_probs=44.1
Q ss_pred HHHHHHHHcC-cEEEcCceeeEEEecCCCCeEEEEEe---CC-----eEEecCEEEEccChhhHHHhh
Q 018455 167 PWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC---GK-----ETYSAGAVVLAVGISTLQELI 225 (355)
Q Consensus 167 ~l~~~l~~~G-~~i~l~~~V~~I~~~~~~~~v~~v~~---~g-----~~~~ad~VV~a~p~~~~~~l~ 225 (355)
.+.+.+.+.| ++|+++++|++|..+++++++++|.+ +| .++.|+.||+|+.+....+|+
T Consensus 226 ~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~lL 293 (504)
T 1n4w_A 226 TYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELL 293 (504)
T ss_dssp THHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHH
T ss_pred HHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHHH
Confidence 3444445555 89999999999999864347888876 45 368899999999987665554
No 73
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=95.44 E-value=0.036 Score=52.55 Aligned_cols=55 Identities=22% Similarity=0.268 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeE--EEEEe-CCe-EEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCI--SDVVC-GKE-TYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v--~~v~~-~g~-~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|++|..+++ +++ ..|.+ +|+ +++||.||+|+...
T Consensus 257 ~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~-~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~ 315 (523)
T 1mo9_A 257 TRAYVLDRMKEQGMEIISGSNVTRIEEDAN-GRVQAVVAMTPNGEMRIETDFVFLGLGEQ 315 (523)
T ss_dssp HHHHHHHHHHHTTCEEESSCEEEEEEECTT-SBEEEEEEEETTEEEEEECSCEEECCCCE
T ss_pred HHHHHHHHHHhCCcEEEECCEEEEEEEcCC-CceEEEEEEECCCcEEEEcCEEEECcCCc
Confidence 667788889999999999999999997654 443 34666 566 89999999999743
No 74
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=95.41 E-value=0.028 Score=51.43 Aligned_cols=53 Identities=17% Similarity=0.213 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|++|..++ ++.+|.+ +|++++||.||+|++..
T Consensus 187 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~~~~v~~~dg~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 187 IGAWLRGLLTELGVQVELGTGVVGFSGEG---QLEQVMASDGRSFVADSALICVGAE 240 (410)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEECSS---SCCEEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeccC---cEEEEEECCCCEEEcCEEEEeeCCe
Confidence 55667788888999999999999998754 2456777 78899999999999764
No 75
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=95.40 E-value=0.036 Score=52.84 Aligned_cols=55 Identities=16% Similarity=0.184 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHc-CcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~-G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.|.+.+++. |++|+++ +|++|..+++ +.+++|++ +|++++||.||.|+..+.
T Consensus 196 l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~-g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 196 VADFLRRFATEKLGVRHVED-RVEHVQRDAN-GNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHSCCEEEEC-CEEEEEECTT-SCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHhcCCcEEEEC-eEeEEEEcCC-CCEEEEEECCCCEEECCEEEECCCCch
Confidence 667788888888 9999999 9999998655 45557777 577899999999998865
No 76
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=95.39 E-value=0.032 Score=50.66 Aligned_cols=60 Identities=18% Similarity=0.181 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHc-CcEEEcCceeeEEEecCCCCeEE-EEEe-CCeEEecCEEEEccChhhH-HHhh
Q 018455 164 IFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCIS-DVVC-GKETYSAGAVVLAVGISTL-QELI 225 (355)
Q Consensus 164 l~~~l~~~l~~~-G~~i~l~~~V~~I~~~~~~~~v~-~v~~-~g~~~~ad~VV~a~p~~~~-~~l~ 225 (355)
+.+.|.+.+++. |++|+++++|++|+.++++ ++ .|++ +|++++||.||.|+..+.. .+.+
T Consensus 109 l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~--v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~l 172 (399)
T 2x3n_A 109 LRRLVLEKIDGEATVEMLFETRIEAVQRDERH--AIDQVRLNDGRVLRPRVVVGADGIASYVRRRL 172 (399)
T ss_dssp HHHHHHHHHTTCTTEEEECSCCEEEEEECTTS--CEEEEEETTSCEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc--eEEEEEECCCCEEECCEEEECCCCChHHHHHh
Confidence 667788888777 8999999999999988753 42 4666 6778999999999998753 4444
No 77
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=95.31 E-value=0.044 Score=51.69 Aligned_cols=55 Identities=20% Similarity=0.130 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.|.+.+++.|++|+.+ +|++|..+++ +.+++|++ +|++++||.||.|+..+.
T Consensus 175 l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~-~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 175 VARYLSEYAIARGVRHVVD-DVQHVGQDER-GWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CEEEEEECTT-SCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHCCCEEEEC-eEeEEEEcCC-CCEEEEEECCCCEEEcCEEEECCCcch
Confidence 6677888888889999999 9999998655 45557777 566899999999999875
No 78
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=95.31 E-value=0.014 Score=53.41 Aligned_cols=54 Identities=17% Similarity=0.161 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHcCcEEEcCceee---------EEEecCCCCeEEEEEeCCeEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVT---------DFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~---------~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.|.+.+++.|++|+.+++|+ +|..++ +++ +|.+++++++||.||+|+.++.
T Consensus 174 l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~--~~v-~v~~~~g~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 174 LALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTN--THQ-IVVHETRQIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC----------CBCCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeC--CeE-EEEECCcEEECCEEEECCCccH
Confidence 66788888888999999999999 888766 335 6777666899999999999875
No 79
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=95.28 E-value=0.043 Score=51.40 Aligned_cols=53 Identities=26% Similarity=0.359 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|++|+.+++ ++ .|++ +|++++||.||+|++..
T Consensus 234 ~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~--~v-~v~~~~g~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 234 LRQLLNDAMVAKGISIIYEATVSQVQSTEN--CY-NVVLTNGQTICADRVMLATGRV 287 (484)
T ss_dssp HHHHHHHHHHHHTCEEESSCCEEEEEECSS--SE-EEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEeeCC--EE-EEEECCCcEEEcCEEEEeeCCC
Confidence 667788888889999999999999998764 25 5666 67789999999999753
No 80
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=95.28 E-value=0.042 Score=51.68 Aligned_cols=54 Identities=17% Similarity=0.247 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|++|..+++ +.+ .|++ +|++++||.||+|+...
T Consensus 237 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~-~v~~~~G~~i~~D~vv~a~G~~ 291 (495)
T 2wpf_A 237 IREEVTKQLTANGIEIMTNENPAKVSLNTD-GSK-HVTFESGKTLDVDVVMMAIGRI 291 (495)
T ss_dssp HHHHHHHHHHHTTCEEEESCCEEEEEECTT-SCE-EEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-ceE-EEEECCCcEEEcCEEEECCCCc
Confidence 567788888999999999999999997654 223 5666 67789999999999753
No 81
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=95.24 E-value=0.048 Score=51.45 Aligned_cols=55 Identities=16% Similarity=0.146 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe---CC--eEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK--ETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~---~g--~~~~ad~VV~a~p~~~ 220 (355)
+.+.|.+.+++.|++|+.+++|++|..++ +++.+|++ +| .+++||.||.|+..+.
T Consensus 113 l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~--~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 113 FDDMLLRNSERKGVDVRERHEVIDVLFEG--ERAVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHTTCEEESSCEEEEEEEET--TEEEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHhCCCEEEcCCEEEEEEEEC--CEEEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 66778888888999999999999999976 45666654 35 3899999999999864
No 82
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=95.21 E-value=0.041 Score=51.63 Aligned_cols=54 Identities=15% Similarity=0.190 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|++|..+++ +.+ .|++ +|++++||.||+|+...
T Consensus 233 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~-~v~~~~G~~i~~D~vv~a~G~~ 287 (490)
T 1fec_A 233 LRKQLTEQLRANGINVRTHENPAKVTKNAD-GTR-HVVFESGAEADYDVVMLAIGRV 287 (490)
T ss_dssp HHHHHHHHHHHTTEEEEETCCEEEEEECTT-SCE-EEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-CEE-EEEECCCcEEEcCEEEEccCCC
Confidence 667788888999999999999999998654 223 5666 67789999999999753
No 83
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=95.12 E-value=0.049 Score=50.92 Aligned_cols=54 Identities=9% Similarity=0.073 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CC-eEEecCEEEEccCh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK-ETYSAGAVVLAVGI 218 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g-~~~~ad~VV~a~p~ 218 (355)
+.+.+.+.+++.|++|+++++|++|+.+++ +++..|.+ +| ++++||.||+|+..
T Consensus 228 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~~v~~~~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 228 IQNTITDHYVKEGINVHKLSKIVKVEKNVE-TDKLKIHMNDSKSIDDVDELIWTIGR 283 (479)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEEECC--CCCEEEEETTSCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHhCCeEEEeCCEEEEEEEcCC-CcEEEEEECCCcEEEEcCEEEECCCC
Confidence 667788888899999999999999987653 32235666 67 78999999999974
No 84
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=95.10 E-value=0.05 Score=51.16 Aligned_cols=53 Identities=13% Similarity=0.172 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|++|+.+++ ++ .|.+ +|++++||.||+|+...
T Consensus 225 ~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~--~v-~v~~~~g~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 225 AALVLEESFAERGVRLFKNARAASVTRTGA--GV-LVTMTDGRTVEGSHALMTIGSV 278 (499)
T ss_dssp HHHHHHHHHHHTTCEEETTCCEEEEEECSS--SE-EEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEeCC--EE-EEEECCCcEEEcCEEEECCCCC
Confidence 667788888999999999999999997663 25 4655 57789999999998754
No 85
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=95.08 E-value=0.069 Score=46.66 Aligned_cols=54 Identities=17% Similarity=0.290 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-C----C--eEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G----K--ETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~----g--~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|++|..++ +++.+|++ + | ++++||.||+|++..
T Consensus 186 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 186 LIKRLMDKVENGNIILHTNRTLEEVTGDQ--MGVTGVRLRDTQNSDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp HHHHHHHHHHTSSEEEECSCEEEEEEECS--SSEEEEEEECCTTCCCCEEEECSEEEECSCEE
T ss_pred HHHHHHHhcccCCeEEEcCceeEEEEcCC--CceEEEEEEeccCCCceEEEEcCEEEEEeCCC
Confidence 55667777888999999999999998765 34656665 3 4 579999999999754
No 86
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=95.08 E-value=0.048 Score=50.71 Aligned_cols=53 Identities=19% Similarity=0.146 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEE-e-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVV-C-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~-~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|++|+.+++ +.+ .|. + +|+ ++||.||+|+...
T Consensus 213 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~-~v~~~~~g~-i~aD~Vv~a~G~~ 267 (463)
T 4dna_A 213 MRRGLHAAMEEKGIRILCEDIIQSVSADAD-GRR-VATTMKHGE-IVADQVMLALGRM 267 (463)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECTT-SCE-EEEESSSCE-EEESEEEECSCEE
T ss_pred HHHHHHHHHHHCCCEEECCCEEEEEEEcCC-CEE-EEEEcCCCe-EEeCEEEEeeCcc
Confidence 667788889999999999999999998764 333 577 6 566 9999999999753
No 87
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=95.07 E-value=0.052 Score=50.98 Aligned_cols=53 Identities=15% Similarity=0.163 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|++|..++ +++ .|++ +|++++||.||+|+...
T Consensus 228 ~~~~~~~~l~~~GV~v~~~~~V~~i~~~~--~~~-~v~l~dG~~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 228 LSNWTMEKVRREGVKVMPNAIVQSVGVSS--GKL-LIKLKDGRKVETDHIVAAVGLE 281 (493)
T ss_dssp HHHHHHHHHHTTTCEEECSCCEEEEEEET--TEE-EEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEecC--CeE-EEEECCCCEEECCEEEECCCCC
Confidence 56677788889999999999999998765 334 5666 67899999999998753
No 88
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=95.04 E-value=0.064 Score=49.94 Aligned_cols=53 Identities=17% Similarity=0.176 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|++|..++ + ...|.+++++++||.||+|+...
T Consensus 218 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~--~-~~~v~~~~~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 218 IGEAVTAAFRAEGIEVLEHTQASQVAHMD--G-EFVLTTTHGELRADKLLVATGRT 270 (467)
T ss_dssp HHHHHHHHHHHTTCEEETTCCEEEEEEET--T-EEEEEETTEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHhCCCEEEcCCEEEEEEEeC--C-EEEEEECCcEEEcCEEEECCCCC
Confidence 66778888999999999999999998765 3 33577778899999999998754
No 89
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=95.00 E-value=0.059 Score=51.83 Aligned_cols=58 Identities=14% Similarity=0.194 Sum_probs=46.4
Q ss_pred hHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe----CCe--EEecCEEEEccChhh
Q 018455 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIST 220 (355)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~--~~~ad~VV~a~p~~~ 220 (355)
..+.+.|.+.+.+.|++|+++++|++|..+++ ++|.+|.+ +|+ ++.|+.||+|+....
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~-g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQD-GAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTT-SCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCC-CEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 34678888888888999999999999998633 56777764 354 689999999998854
No 90
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=94.96 E-value=0.055 Score=48.92 Aligned_cols=53 Identities=19% Similarity=0.199 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|++|..+++ .+ .|.+ +|++++||.||+|+...
T Consensus 189 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~--~~-~v~~~~g~~i~~d~vv~a~G~~ 242 (384)
T 2v3a_A 189 AAKAVQAGLEGLGVRFHLGPVLASLKKAGE--GL-EAHLSDGEVIPCDLVVSAVGLR 242 (384)
T ss_dssp HHHHHHHHHHTTTCEEEESCCEEEEEEETT--EE-EEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHcCCEEEeCCEEEEEEecCC--EE-EEEECCCCEEECCEEEECcCCC
Confidence 567788888889999999999999997653 24 5666 67889999999999764
No 91
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=94.90 E-value=0.061 Score=49.87 Aligned_cols=53 Identities=11% Similarity=0.211 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccCh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 218 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~ 218 (355)
+.+.+.+.+++.|++|+++++|++|+.+++ +.+ .|++ +|++++||.||+|+..
T Consensus 210 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~-~v~~~~g~~i~~D~vv~a~G~ 263 (450)
T 1ges_A 210 ISETLVEVMNAEGPQLHTNAIPKAVVKNTD-GSL-TLELEDGRSETVDCLIWAIGR 263 (450)
T ss_dssp HHHHHHHHHHHHSCEEECSCCEEEEEECTT-SCE-EEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEeCC-cEE-EEEECCCcEEEcCEEEECCCC
Confidence 667788888899999999999999997654 223 5666 6778999999999864
No 92
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=94.86 E-value=0.045 Score=51.63 Aligned_cols=59 Identities=15% Similarity=0.137 Sum_probs=43.5
Q ss_pred HHHHHHHHcC-cEEEcCceeeEEEecCCCCeEEEEEe---CC-----eEEecCEEEEccChhhHHHhh
Q 018455 167 PWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC---GK-----ETYSAGAVVLAVGISTLQELI 225 (355)
Q Consensus 167 ~l~~~l~~~G-~~i~l~~~V~~I~~~~~~~~v~~v~~---~g-----~~~~ad~VV~a~p~~~~~~l~ 225 (355)
++...+.+.| ++|+++++|++|..+++++++++|.+ +| .+++|+.||+|+.+....+|+
T Consensus 231 ~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL 298 (507)
T 1coy_A 231 TYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLL 298 (507)
T ss_dssp THHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHH
T ss_pred HHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHH
Confidence 3444444454 89999999999999864236888876 45 367899999999987665554
No 93
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=94.68 E-value=0.081 Score=51.13 Aligned_cols=56 Identities=11% Similarity=0.132 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe----CCe--EEecCEEEEccChhh
Q 018455 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIST 220 (355)
Q Consensus 163 ~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~--~~~ad~VV~a~p~~~ 220 (355)
.+...|.+.+.+.|++|+.+++|.+|..++ |+|.+|.+ +|+ ++.|+.||+|+....
T Consensus 156 ~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 156 SLLHTLYGRSLRYDTSYFVEYFALDLLMEN--GECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHTTSCCEEEETEEEEEEEEET--TEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHhCCCEEEEceEEEEEEEEC--CEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 467788888888899999999999999875 56777764 354 689999999998765
No 94
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=94.64 E-value=0.054 Score=50.83 Aligned_cols=52 Identities=21% Similarity=0.380 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccCh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGI 218 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~ 218 (355)
+.+.+.+.+++.|++|+++++|++|.. + +++..|.++|++++||.||+|+..
T Consensus 238 ~~~~l~~~l~~~GV~i~~~~~v~~i~~-~--~~v~~v~~~g~~i~~D~Vi~a~G~ 289 (490)
T 2bc0_A 238 LTDLMAKNMEEHGIQLAFGETVKEVAG-N--GKVEKIITDKNEYDVDMVILAVGF 289 (490)
T ss_dssp HHHHHHHHHHTTTCEEEETCCEEEEEC-S--SSCCEEEESSCEEECSEEEECCCE
T ss_pred HHHHHHHHHHhCCeEEEeCCEEEEEEc-C--CcEEEEEECCcEEECCEEEECCCC
Confidence 667788888899999999999999986 3 335456678889999999999974
No 95
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=94.58 E-value=0.098 Score=45.13 Aligned_cols=53 Identities=17% Similarity=0.224 Sum_probs=41.2
Q ss_pred HHHHHHHHHHH-cCcEEEcCceeeEEEecCCCCeEEEEEe----------CC-----eEEecCEEEEccCh
Q 018455 164 IFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC----------GK-----ETYSAGAVVLAVGI 218 (355)
Q Consensus 164 l~~~l~~~l~~-~G~~i~l~~~V~~I~~~~~~~~v~~v~~----------~g-----~~~~ad~VV~a~p~ 218 (355)
+...+.+.+.+ .|++|+++++|++|..++ +++.+|.+ +| .+++||.||+|+..
T Consensus 121 ~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~--~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~ 189 (284)
T 1rp0_A 121 FTSTIMSKLLARPNVKLFNAVAAEDLIVKG--NRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGH 189 (284)
T ss_dssp HHHHHHHHHHTSTTEEEEETEEEEEEEEET--TEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCS
T ss_pred HHHHHHHHHHhcCCCEEEcCcEEEEEEecC--CeEEEEEEeccccccccCccccCceEEEECCEEEECCCC
Confidence 45567776655 699999999999999876 45666654 22 67999999999985
No 96
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=94.56 E-value=0.083 Score=50.15 Aligned_cols=55 Identities=16% Similarity=0.165 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.|.+.+++.|++++.+ +|++|..+++ +.+++|++ +|++++||.||.|+..+.
T Consensus 167 l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~-g~~~~v~~~~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 167 VADFLKRWAVERGVNRVVD-EVVDVRLNNR-GYISNLLTKEGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CEEEEEECTT-SCEEEEEETTSCEECCSEEEECCGGGC
T ss_pred HHHHHHHHHHHCCCEEEEe-eEeEEEEcCC-CcEEEEEECCCcEEEeCEEEECCCCch
Confidence 6677888888889999999 8999998665 44556777 566899999999998865
No 97
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=94.52 E-value=0.097 Score=51.00 Aligned_cols=56 Identities=14% Similarity=0.157 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe----CCe--EEecCEEEEccChhh
Q 018455 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIST 220 (355)
Q Consensus 163 ~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~--~~~ad~VV~a~p~~~ 220 (355)
.+...|.+.+.+.|++|+.+++|.+|..++ |+|.+|.+ +|+ .+.|+.||+|+....
T Consensus 159 ~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 159 TMLFAVANECLKLGVSIQDRKEAIALIHQD--GKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEET--TEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEecC--CEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 377888888888899999999999999865 56777754 354 589999999998765
No 98
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.40 E-value=0.099 Score=49.14 Aligned_cols=54 Identities=11% Similarity=0.116 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeE-EecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKET-YSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~-~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|++|..+++ +.+ .|.+ +|++ ++||.||+|++..
T Consensus 219 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~-~v~~~~g~~~~~~D~vi~a~G~~ 274 (500)
T 1onf_A 219 VINVLENDMKKNNINIVTFADVVEIKKVSD-KNL-SIHLSDGRIYEHFDHVIYCVGRS 274 (500)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEESST-TCE-EEEETTSCEEEEESEEEECCCBC
T ss_pred hHHHHHHHHHhCCCEEEECCEEEEEEEcCC-ceE-EEEECCCcEEEECCEEEECCCCC
Confidence 667788889999999999999999987654 223 4666 6776 9999999999753
No 99
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=94.34 E-value=0.13 Score=48.09 Aligned_cols=53 Identities=26% Similarity=0.338 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|++|..++ ++..|.+++++++||.||+|+...
T Consensus 229 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~---~v~~v~~~~~~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 229 MAEYIYKEADKHHIEILTNENVKAFKGNE---RVEAVETDKGTYKADLVLVSVGVK 281 (480)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEESS---BEEEEEETTEEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHcCcEEEcCCEEEEEEcCC---cEEEEEECCCEEEcCEEEECcCCC
Confidence 66778888889999999999999998642 365677787899999999999754
No 100
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=94.33 E-value=0.095 Score=48.57 Aligned_cols=53 Identities=25% Similarity=0.301 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|++|..+++ .+ .+.+ +|++++||.||+|+...
T Consensus 210 ~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~--~v-~v~~~~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 210 VSRAAERVFKKQGLTIRTGVRVTAVVPEAK--GA-RVELEGGEVLEADRVLVAVGRR 263 (455)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEEEETT--EE-EEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHCCCEEEECCEEEEEEEeCC--EE-EEEECCCeEEEcCEEEECcCCC
Confidence 667788888889999999999999998763 24 4665 67889999999999754
No 101
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=94.32 E-value=0.094 Score=46.39 Aligned_cols=54 Identities=19% Similarity=0.083 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEE-EEeCCeEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISD-VVCGKETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~-v~~~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.+.+.+++.|++++++++|++|..+++ .+ . |.++++++.||.||+|+....
T Consensus 78 ~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~--~~-~~v~~~~g~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 78 VLAYLAQYEQKYALPVLRPIRVQRVSHFGE--RL-RVVARDGRQWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHHHHHHHTTCCEECSCCEEEEEEETT--EE-EEEETTSCEEEEEEEEECCCSGG
T ss_pred HHHHHHHHHHHcCCEEEcCCEEEEEEECCC--cE-EEEEeCCCEEEeCEEEECCCCCC
Confidence 556677777888999999999999998773 23 4 777655999999999999644
No 102
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=94.20 E-value=0.11 Score=49.89 Aligned_cols=55 Identities=22% Similarity=0.176 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe--CC--eEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GK--ETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~g--~~~~ad~VV~a~p~~~ 220 (355)
+.+.|.+.+++.|++|+.+++|++|..+++ .+++|++ +| .+++||.||.|+....
T Consensus 130 l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g--~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 130 FDKLLLDEARSRGITVHEETPVTDVDLSDP--DRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHTTCEEETTCCEEEEECCST--TCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEcCC--CEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 667788888889999999999999998743 2456765 56 5899999999998875
No 103
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=94.19 E-value=0.097 Score=50.37 Aligned_cols=54 Identities=19% Similarity=0.109 Sum_probs=44.3
Q ss_pred HHHHHHHHHHH-cCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~-~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.+.+.+++ .|++| ++++|++|..++ ++|++|.+ +|.++.||.||+|+....
T Consensus 125 ~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~--g~V~GV~t~dG~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 125 YREYMKKVCENQENLYI-KQEEVVDIIVKN--NQVVGVRTNLGVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp HHHHHHHHHHTCTTEEE-EESCEEEEEESS--SBEEEEEETTSCEEECSEEEECCTTCB
T ss_pred HHHHHHHHHHhCCCCEE-EEeEEEEEEecC--CEEEEEEECCCcEEEeCEEEEccCCCc
Confidence 66778888877 58999 688999999876 45778887 677899999999999753
No 104
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=94.19 E-value=0.11 Score=48.18 Aligned_cols=52 Identities=19% Similarity=0.178 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCe-EEecCEEEEccCh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE-TYSAGAVVLAVGI 218 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~-~~~ad~VV~a~p~ 218 (355)
+.+.+.+.+++.|++|+++++|++|..++++ + .|++ +|+ ++++|.||+|+..
T Consensus 209 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~-~v~~~~G~~~i~~D~vv~a~G~ 262 (463)
T 2r9z_A 209 LSATLAENMHAQGIETHLEFAVAALERDAQG--T-TLVAQDGTRLEGFDSVIWAVGR 262 (463)
T ss_dssp HHHHHHHHHHHTTCEEESSCCEEEEEEETTE--E-EEEETTCCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe--E-EEEEeCCcEEEEcCEEEECCCC
Confidence 5677788888999999999999999976642 4 5666 677 8999999999864
No 105
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=94.17 E-value=0.13 Score=48.73 Aligned_cols=55 Identities=11% Similarity=0.175 Sum_probs=44.2
Q ss_pred HHHHHHHHHHH-cCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~-~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.|.+.+++ .|++|+.+ +|++|..+++ +.+++|++ +|++++||.||.|+..+.
T Consensus 177 l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~-g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 177 FSQLLTEHCTQKLGVTHIRD-HVSQIINNQH-GDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp HHHHHHHHHHHTSCCEEEEC-CEEEEEECTT-SCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred HHHHHHHHHHhcCCCEEEEe-EEEEEEecCC-CcEEEEEECCCCEEEcCEEEECCCcch
Confidence 66778888888 89999999 5999998765 44546766 567799999999998864
No 106
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=94.12 E-value=0.1 Score=50.36 Aligned_cols=54 Identities=20% Similarity=0.158 Sum_probs=44.2
Q ss_pred HHHHHHHHHHH-cCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~-~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.+.+.+++ .|++| ++++|++|..++ ++|++|.+ +|.++.||.||+|+....
T Consensus 126 ~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~--g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 126 YRQAVRTALENQPNLMI-FQQAVEDLIVEN--DRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHHHHHHHTCTTEEE-EECCEEEEEESS--SBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred HHHHHHHHHHhCCCCEE-EEEEEEEEEecC--CEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 56777778877 68999 688999999876 45778887 577899999999999754
No 107
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=94.12 E-value=0.08 Score=48.94 Aligned_cols=53 Identities=26% Similarity=0.405 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|++|..++ ++..|.++|++++||.||+|+...
T Consensus 193 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~v~~v~~~~~~i~~d~vi~a~G~~ 245 (447)
T 1nhp_A 193 FTDVLTEEMEANNITIATGETVERYEGDG---RVQKVVTDKNAYDADLVVVAVGVR 245 (447)
T ss_dssp HHHHHHHHHHTTTEEEEESCCEEEEECSS---BCCEEEESSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHhCCCEEEcCCEEEEEEccC---cEEEEEECCCEEECCEEEECcCCC
Confidence 66778888888999999999999998652 244566788889999999999753
No 108
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=94.07 E-value=0.12 Score=46.07 Aligned_cols=54 Identities=19% Similarity=0.165 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.+.+.+++.|++|+++++|++|..++++ + .|.++++++.||.||+|+....
T Consensus 90 ~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~--~-~v~~~~g~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 90 YAEYLQVVANHYELNIFENTVVTNISADDAY--Y-TIATTTETYHADYIFVATGDYN 143 (369)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECSSS--E-EEEESSCCEEEEEEEECCCSTT
T ss_pred HHHHHHHHHHHcCCeEEeCCEEEEEEECCCe--E-EEEeCCCEEEeCEEEECCCCCC
Confidence 4455666677789999999999999987642 3 5666555799999999998753
No 109
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=93.99 E-value=0.13 Score=48.72 Aligned_cols=61 Identities=20% Similarity=0.245 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCC--eEEEEEe-CC---eEEecCEEEEccChhh-HHHhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERC--CISDVVC-GK---ETYSAGAVVLAVGIST-LQELI 225 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~--~v~~v~~-~g---~~~~ad~VV~a~p~~~-~~~l~ 225 (355)
+.+.|.+.+++.|++|+++++|++|+.++++. .+. +++ ++ .+++||.||.|...+. ..+.+
T Consensus 122 l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~-v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~l 189 (535)
T 3ihg_A 122 LEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVT-ARLAGPDGEYDLRAGYLVGADGNRSLVRESL 189 (535)
T ss_dssp HHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEE-EEEEETTEEEEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEE-EEEEcCCCeEEEEeCEEEECCCCcchHHHHc
Confidence 66778888888899999999999999987510 353 444 44 6899999999999875 34444
No 110
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=93.80 E-value=0.16 Score=49.03 Aligned_cols=57 Identities=19% Similarity=0.212 Sum_probs=45.8
Q ss_pred hHHHHHHHHHHHHcC-cEEEcCceeeEEEecCCCCeEEEEEe----CCe--EEecCEEEEccChhh
Q 018455 162 EKIFEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIST 220 (355)
Q Consensus 162 ~~l~~~l~~~l~~~G-~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~--~~~ad~VV~a~p~~~ 220 (355)
..+...|.+.+.+.| ++|+.+++|++|..++ ++|.+|.. +|+ ++.|+.||+|+....
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDD--GHVRGLVAMNMMEGTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEET--TEEEEEEEEETTTTEEEEEECSCEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeC--CEEEEEEEEEcCCCcEEEEEcCeEEECCCCCc
Confidence 336678888888888 9999999999999876 55777643 465 689999999998864
No 111
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=93.77 E-value=0.2 Score=47.12 Aligned_cols=59 Identities=19% Similarity=0.228 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCe---EEecCEEEEccChhh-HHHhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE---TYSAGAVVLAVGIST-LQELI 225 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~---~~~ad~VV~a~p~~~-~~~l~ 225 (355)
+.+.|.+.+++.|++|+++++|++|++++++ |. |++ +++ +++||.||.|...+. ..+.+
T Consensus 109 l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~--v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~l 172 (499)
T 2qa2_A 109 TESVLEEWALGRGAELLRGHTVRALTDEGDH--VV-VEVEGPDGPRSLTTRYVVGCDGGRSTVRKAA 172 (499)
T ss_dssp HHHHHHHHHHHTTCEEEESCEEEEEEECSSC--EE-EEEECSSCEEEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE--EE-EEEEcCCCcEEEEeCEEEEccCcccHHHHHc
Confidence 5667778888889999999999999998753 53 655 443 799999999999975 45554
No 112
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=93.76 E-value=0.13 Score=45.04 Aligned_cols=52 Identities=10% Similarity=0.082 Sum_probs=39.5
Q ss_pred HHHHHHHHHc-CcEEEcCceeeEEEecCCCCeEEEEEe-C-----CeEEecCEEEEccChh
Q 018455 166 EPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC-G-----KETYSAGAVVLAVGIS 219 (355)
Q Consensus 166 ~~l~~~l~~~-G~~i~l~~~V~~I~~~~~~~~v~~v~~-~-----g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+. |++|+++++|.+|..+++ ++.+|++ + +++++||.||+|++..
T Consensus 212 ~~~~~~l~~~~gv~i~~~~~v~~i~~~~~--~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 212 TIMQKRAEKNEKIEILYNTVALEAKGDGK--LLNALRIKNTKKNEETDLPVSGLFYAIGHT 270 (338)
T ss_dssp HHHHHHHHHCTTEEEECSEEEEEEEESSS--SEEEEEEEETTTTEEEEEECSEEEECSCEE
T ss_pred HHHHHHHHhcCCeEEeecceeEEEEcccC--cEEEEEEEECCCCceEEEEeCEEEEEeCCC
Confidence 3455666555 999999999999998763 3656665 2 3578999999999864
No 113
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=93.73 E-value=0.16 Score=45.59 Aligned_cols=57 Identities=14% Similarity=0.157 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhh-HHHhhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST-LQELIK 226 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~-~~~l~~ 226 (355)
+.+.|.+.+.+.|++|+++++|++|+. + + .|++ +|++++||.||.|+.... ..+.+.
T Consensus 109 l~~~L~~~~~~~gv~i~~~~~v~~i~~--~-~---~v~~~~g~~~~ad~vV~AdG~~s~vr~~l~ 167 (379)
T 3alj_A 109 LHDALVNRARALGVDISVNSEAVAADP--V-G---RLTLQTGEVLEADLIVGADGVGSKVRDSIG 167 (379)
T ss_dssp HHHHHHHHHHHTTCEEESSCCEEEEET--T-T---EEEETTSCEEECSEEEECCCTTCHHHHHHC
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEe--C-C---EEEECCCCEEEcCEEEECCCccHHHHHHhc
Confidence 567788888888999999999999987 3 4 3555 677899999999999875 344443
No 114
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=93.54 E-value=0.21 Score=46.51 Aligned_cols=53 Identities=19% Similarity=0.239 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CC---eEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK---ETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g---~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|++|+.+++ .+ .|++ ++ +++++|.||+|+...
T Consensus 223 ~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~--~~-~v~~~~~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 223 VAKEAQKILTKQGLKILLGARVTGTEVKNK--QV-TVKFVDAEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp HHHHHHHHHHHTTEEEEETCEEEEEEECSS--CE-EEEEESSSEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHhCCCEEEECCEEEEEEEcCC--EE-EEEEEeCCCcEEEECCEEEEeeCCc
Confidence 667788888899999999999999998764 24 3444 33 579999999999753
No 115
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=93.51 E-value=0.27 Score=44.31 Aligned_cols=56 Identities=9% Similarity=-0.014 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe--CCe--EEecCEEEEccChhhH
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGISTL 221 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~g~--~~~ad~VV~a~p~~~~ 221 (355)
+.+.|.+.+.+.|++|+++++|++|+.+++ +.+ .|++ +|+ +++||.||.|...+..
T Consensus 105 l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~-~~~-~v~~~~~g~~~~~~a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 105 VTRDLMEAREACGATTVYQAAEVRLHDLQG-ERP-YVTFERDGERLRLDCDYIAGCDGFHGI 164 (394)
T ss_dssp HHHHHHHHHHHTTCEEESSCEEEEEECTTS-SSC-EEEEEETTEEEEEECSEEEECCCTTCS
T ss_pred HHHHHHHHHHhcCCeEEeceeEEEEEEecC-Cce-EEEEecCCcEEEEEeCEEEECCCCCcH
Confidence 556677777778999999999999998643 224 4554 676 7999999999998753
No 116
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=93.48 E-value=0.16 Score=45.29 Aligned_cols=54 Identities=9% Similarity=0.027 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe---CC--eEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK--ETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~---~g--~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|.+|..++ +++.+|.+ +| +++++|.||+|++..
T Consensus 204 ~~~~l~~~~~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~ 262 (360)
T 3ab1_A 204 TAHEVERARANGTIDVYLETEVASIEESN--GVLTRVHLRSSDGSKWTVEADRLLILIGFK 262 (360)
T ss_dssp HHHSSHHHHHHTSEEEESSEEEEEEEEET--TEEEEEEEEETTCCEEEEECSEEEECCCBC
T ss_pred HHHHHHHHhhcCceEEEcCcCHHHhccCC--CceEEEEEEecCCCeEEEeCCEEEECCCCC
Confidence 44566777778899999999999999865 44555655 56 578999999999753
No 117
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=93.38 E-value=0.18 Score=48.06 Aligned_cols=54 Identities=15% Similarity=0.309 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEec------------------CCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYD------------------EERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~------------------~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|.+|..+ ++ +++. +++ +|++++||.||+|+...
T Consensus 194 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~-v~~~~g~~i~~D~vi~a~G~~ 266 (565)
T 3ntd_A 194 MAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIK-GHLS-LTLSNGELLETDLLIMAIGVR 266 (565)
T ss_dssp HHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTT-CEEE-EEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCC-CcEE-EEEcCCCEEEcCEEEECcCCc
Confidence 5667778888999999999999999873 22 3453 444 67899999999999753
No 118
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=93.33 E-value=0.21 Score=46.92 Aligned_cols=59 Identities=19% Similarity=0.160 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCe---EEecCEEEEccChhh-HHHhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE---TYSAGAVVLAVGIST-LQELI 225 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~---~~~ad~VV~a~p~~~-~~~l~ 225 (355)
+.+.|.+.+++.|++|+++++|++|++++++ |+ |++ +++ +++||.||.|...+. ..+.+
T Consensus 108 l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~--v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~l 171 (500)
T 2qa1_A 108 TETHLEQWATGLGADIRRGHEVLSLTDDGAG--VT-VEVRGPEGKHTLRAAYLVGCDGGRSSVRKAA 171 (500)
T ss_dssp HHHHHHHHHHHTTCEEEETCEEEEEEEETTE--EE-EEEEETTEEEEEEESEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHCCCEEECCcEEEEEEEcCCe--EE-EEEEcCCCCEEEEeCEEEECCCcchHHHHHc
Confidence 5567778888889999999999999998753 53 555 432 799999999999875 34554
No 119
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=93.33 E-value=0.19 Score=45.85 Aligned_cols=49 Identities=18% Similarity=0.212 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|++|. + + .|++ +|++++||.||+|++..
T Consensus 189 ~~~~l~~~l~~~GV~i~~~~~v~~i~--~--~---~v~~~~g~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 189 LADFVARYHAAQGVDLRFERSVTGSV--D--G---VVLLDDGTRIAADMVVVGIGVL 238 (408)
T ss_dssp HHHHHHHHHHHTTCEEEESCCEEEEE--T--T---EEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHcCcEEEeCCEEEEEE--C--C---EEEECCCCEEEcCEEEECcCCC
Confidence 56778888889999999999999998 3 3 3445 67899999999999754
No 120
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=93.27 E-value=0.27 Score=45.60 Aligned_cols=53 Identities=13% Similarity=0.303 Sum_probs=41.0
Q ss_pred HHHHHHHHH-HHcCcEEEcCceeeEEEecCCCCeEEEEEe---CC--eEEecCEEEEccChh
Q 018455 164 IFEPWMDSM-RTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK--ETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l-~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~---~g--~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+ ++.|++|+++++|.+|+.++++ + .|.+ +| ++++||.||+|+...
T Consensus 217 ~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~--~-~v~~~~~~g~~~~i~~D~vv~a~G~~ 275 (468)
T 2qae_A 217 VTNALVGALAKNEKMKFMTSTKVVGGTNNGDS--V-SLEVEGKNGKRETVTCEALLVSVGRR 275 (468)
T ss_dssp HHHHHHHHHHHHTCCEEECSCEEEEEEECSSS--E-EEEEECC---EEEEEESEEEECSCEE
T ss_pred HHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCe--E-EEEEEcCCCceEEEECCEEEECCCcc
Confidence 567788888 8999999999999999976642 4 3543 45 679999999998643
No 121
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=93.27 E-value=0.088 Score=49.48 Aligned_cols=58 Identities=12% Similarity=0.019 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe----CC--eEEecCEEEEccChhhH
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGISTL 221 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g--~~~~ad~VV~a~p~~~~ 221 (355)
+.+.|.+.+++.|++|+++++|++|..+++++..+.|++ +| ++++||.||.|+.....
T Consensus 168 l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 168 LQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp HHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 556777888888999999999999997521022345665 44 47899999999998753
No 122
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=93.21 E-value=0.26 Score=45.71 Aligned_cols=52 Identities=13% Similarity=0.167 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe--C--Ce--EEecCEEEEccCh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--G--KE--TYSAGAVVLAVGI 218 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~--g~--~~~ad~VV~a~p~ 218 (355)
+.+.+.+.+++.|++|+++++|++|..+++ .+ .|++ + |+ +++||.||+|+..
T Consensus 212 ~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~--~~-~v~~~~~~~g~~~~i~~D~vv~a~G~ 269 (464)
T 2eq6_A 212 TAALLRRALEKEGIRVRTKTKAVGYEKKKD--GL-HVRLEPAEGGEGEEVVVDKVLVAVGR 269 (464)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEETT--EE-EEEEEETTCCSCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHhcCCEEEcCCEEEEEEEeCC--EE-EEEEeecCCCceeEEEcCEEEECCCc
Confidence 567788888899999999999999997663 34 3554 5 66 8999999999864
No 123
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=93.21 E-value=0.21 Score=43.59 Aligned_cols=51 Identities=18% Similarity=0.352 Sum_probs=38.8
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe----CCe--EEecCEEEEccCh
Q 018455 166 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGI 218 (355)
Q Consensus 166 ~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~--~~~ad~VV~a~p~ 218 (355)
..+.+.+.+.|++|+++++|.+|..++ +++.+|.+ +|+ +++||.||+|++.
T Consensus 194 ~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (319)
T 3cty_A 194 NAYVQEIKKRNIPYIMNAQVTEIVGDG--KKVTGVKYKDRTTGEEKLIETDGVFIYVGL 250 (319)
T ss_dssp HHHHHHHHHTTCCEECSEEEEEEEESS--SSEEEEEEEETTTCCEEEECCSEEEECCCE
T ss_pred HHHHHHHhcCCcEEEcCCeEEEEecCC--ceEEEEEEEEcCCCceEEEecCEEEEeeCC
Confidence 345666778899999999999998765 33545554 454 6899999999864
No 124
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=93.11 E-value=0.16 Score=47.26 Aligned_cols=54 Identities=20% Similarity=0.265 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe--CCeEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.|.+.+++.|++|+.+++| +|..++ +++.+|.+ +++++.||.||+|+....
T Consensus 121 l~~~L~~~~~~~gv~i~~~~~v-~l~~~~--~~v~Gv~v~~~~g~~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 121 IFNFLLKLAREEGIPIIEDRLV-EIRVKD--GKVTGFVTEKRGLVEDVDKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHHHHHTTCCEECCCEE-EEEEET--TEEEEEEETTTEEECCCSEEEECCCCCG
T ss_pred HHHHHHHHHHhCCCEEEECcEE-EEEEeC--CEEEEEEEEeCCCeEEeeeEEECCCCCc
Confidence 6677888887789999999999 998876 55777765 345678999999998765
No 125
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=93.06 E-value=0.23 Score=43.42 Aligned_cols=53 Identities=13% Similarity=0.150 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccCh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGI 218 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~ 218 (355)
+.+.+.+.+++.|.+++++++|++|..++++ .+.|.++++++.+|.||+|+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~--~~~v~~~~g~~~~d~vVlAtG~ 121 (332)
T 3lzw_A 69 LINNLKEQMAKFDQTICLEQAVESVEKQADG--VFKLVTNEETHYSKTVIITAGN 121 (332)
T ss_dssp HHHHHHHHHTTSCCEEECSCCEEEEEECTTS--CEEEEESSEEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHhCCcEEccCEEEEEEECCCC--cEEEEECCCEEEeCEEEECCCC
Confidence 5566777777789999999999999988652 3467776556999999999987
No 126
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=92.98 E-value=0.27 Score=45.75 Aligned_cols=54 Identities=19% Similarity=0.279 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe------CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC------GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~------~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|++|..+++ +.+ .|.+ ++++++||.||+|+...
T Consensus 222 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~-~v~~~~~~~~~~~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 222 ISKNFQRILQKQGFKFKLNTKVTGATKKSD-GKI-DVSIEAASGGKAEVITCDVLLVCIGRR 281 (474)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEECTT-SCE-EEEEEETTSCCCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHCCCEEEeCceEEEEEEcCC-ceE-EEEEEecCCCCceEEEcCEEEECcCCC
Confidence 667788888999999999999999997663 223 3542 45789999999998743
No 127
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=92.97 E-value=0.12 Score=49.44 Aligned_cols=59 Identities=22% Similarity=0.188 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe---CC-eEEecCEEEEccChhh-HHHhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK-ETYSAGAVVLAVGIST-LQELI 225 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~---~g-~~~~ad~VV~a~p~~~-~~~l~ 225 (355)
+.+.|.+.+++.|++|+.+++|++|+.++++ + .|++ +| ++++||.||.|...+. +.+.+
T Consensus 150 l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~--v-~v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~l 213 (570)
T 3fmw_A 150 TEALLAEHAREAGAEIPRGHEVTRLRQDAEA--V-EVTVAGPSGPYPVRARYGVGCDGGRSTVRRLA 213 (570)
T ss_dssp HHHHHHHHHHHHTEECCBSCEEEECCBCSSC--E-EEEEEETTEEEEEEESEEEECSCSSCHHHHHT
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEcCCe--E-EEEEEeCCCcEEEEeCEEEEcCCCCchHHHHc
Confidence 5677888888889999999999999988753 5 3554 56 6899999999999875 34544
No 128
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=92.94 E-value=0.2 Score=48.13 Aligned_cols=51 Identities=14% Similarity=0.172 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|++|..+++ +|++ +|++++||.||+|+...
T Consensus 230 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-----~v~~~~g~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 230 MAAYVHEHMKNHDVELVFEDGVDALEENGA-----VVRLKSGSVIQTDMLILAIGVQ 281 (588)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEGGGT-----EEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHcCCEEEECCeEEEEecCCC-----EEEECCCCEEEcCEEEEccCCC
Confidence 667788889999999999999999986542 3444 67899999999999753
No 129
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=92.77 E-value=0.4 Score=44.61 Aligned_cols=55 Identities=15% Similarity=0.142 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeC----C----eEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG----K----ETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~----g----~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|++|+.++++.++ .|.+. | +++++|.||+|+...
T Consensus 230 ~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~-~v~~~~~~~g~~~g~~~~~D~vi~a~G~~ 292 (478)
T 3dk9_A 230 ISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEV-SMVTAVPGRLPVMTMIPDVDCLLWAIGRV 292 (478)
T ss_dssp HHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEE-EEEECCTTSCCEEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEE-EEEEccCCCCcccceEEEcCEEEEeeccc
Confidence 6677888888999999999999999987642134 45552 2 678999999999753
No 130
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=92.73 E-value=0.13 Score=48.82 Aligned_cols=56 Identities=20% Similarity=0.222 Sum_probs=42.6
Q ss_pred HHHHHHHHHHH-cCcEEEcCceeeEEEecCCCC------eEEEEEe----CCe--EEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERC------CISDVVC----GKE--TYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~-~G~~i~l~~~V~~I~~~~~~~------~v~~v~~----~g~--~~~ad~VV~a~p~~~ 220 (355)
+.+.|.+.+++ .|++|+.+++|++|..+++ + +|.+|.+ +|+ ++.|+.||+|+....
T Consensus 140 l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~-g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 140 VETTLVSKALNHPNIRVLERTNAVDLIVSDK-IGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp --CCCHHHHHHCTTEEEECSEEEEEEEEGGG-TTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHcCCCCEEEeCcEEEEEEEcCC-CCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 55667777777 6999999999999998433 3 6777754 455 789999999998765
No 131
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=92.69 E-value=0.35 Score=44.82 Aligned_cols=52 Identities=15% Similarity=0.245 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe--CC--eEEecCEEEEccCh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GK--ETYSAGAVVLAVGI 218 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~g--~~~~ad~VV~a~p~ 218 (355)
+.+.+.+.+++.|++|+++++|++|..+++ .+ .+.+ +| ++++||.||+|+..
T Consensus 214 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~--~~-~v~~~~~g~~~~~~~D~vv~a~G~ 269 (464)
T 2a8x_A 214 VSKEIEKQFKKLGVTILTATKVESIADGGS--QV-TVTVTKDGVAQELKAEKVLQAIGF 269 (464)
T ss_dssp HHHHHHHHHHHHTCEEECSCEEEEEEECSS--CE-EEEEESSSCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHcCCEEEeCcEEEEEEEcCC--eE-EEEEEcCCceEEEEcCEEEECCCC
Confidence 566778888899999999999999987653 24 3554 45 68999999999864
No 132
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=92.68 E-value=0.23 Score=42.98 Aligned_cols=50 Identities=12% Similarity=0.174 Sum_probs=38.3
Q ss_pred HHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe---CCe--EEecCEEEEccChh
Q 018455 168 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIS 219 (355)
Q Consensus 168 l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~---~g~--~~~ad~VV~a~p~~ 219 (355)
+.+.+++.|++|+++++|.+|..++ +++.+|++ +|+ ++++|.||+|++..
T Consensus 189 ~~~~~~~~gv~~~~~~~v~~i~~~~--~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 189 VEKVKKNEKIELITSASVDEVYGDK--MGVAGVKVKLKDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp HHHHHHCTTEEEECSCEEEEEEEET--TEEEEEEEECTTSCEEEECCSCEEECSCEE
T ss_pred HHHHHhcCCeEEEeCcEEEEEEcCC--CcEEEEEEEcCCCCeEEeecCeEEEEEcCC
Confidence 3344567899999999999998776 34666654 564 78999999999864
No 133
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=92.52 E-value=0.21 Score=46.63 Aligned_cols=53 Identities=21% Similarity=0.265 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-C----CeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G----KETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~----g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|.+|..+++ .+ .|++ + |++++||.||+|+...
T Consensus 228 ~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~--~~-~v~~~~~~~~g~~~~~D~vv~a~G~~ 285 (482)
T 1ojt_A 228 LVKVWQKQNEYRFDNIMVNTKTVAVEPKED--GV-YVTFEGANAPKEPQRYDAVLVAAGRA 285 (482)
T ss_dssp HHHHHHHHHGGGEEEEECSCEEEEEEEETT--EE-EEEEESSSCCSSCEEESCEEECCCEE
T ss_pred HHHHHHHHHHhcCCEEEECCEEEEEEEcCC--eE-EEEEeccCCCceEEEcCEEEECcCCC
Confidence 567788888899999999999999987653 23 4554 5 6789999999999753
No 134
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=92.52 E-value=0.25 Score=46.07 Aligned_cols=53 Identities=21% Similarity=0.151 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CC-----eEEecCEEEEccCh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK-----ETYSAGAVVLAVGI 218 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g-----~~~~ad~VV~a~p~ 218 (355)
+.+.+.+.+++.|++|+++++|.+|+.+++ +.+ .|++ ++ .+++||.||+|+..
T Consensus 229 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 229 MAELVAASMEERGIPFLRKTVPLSVEKQDD-GKL-LVKYKNVETGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp HHHHHHHHHHHTTCCEEETEEEEEEEECTT-SCE-EEEEEETTTCCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-CcE-EEEEecCCCCceeEEEcCEEEECccc
Confidence 567788888899999999999999998654 334 3544 32 27899999999875
No 135
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=92.41 E-value=0.24 Score=47.04 Aligned_cols=55 Identities=31% Similarity=0.341 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHcCc--EEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGC--EFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~--~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|. +|+++++|+++..+++++ .+.|++ +|+++.||.||+|+...
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~-~~~V~~~~G~~i~ad~lV~AtG~~ 146 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDEN-LWEVTTDHGEVYRAKYVVNAVGLL 146 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTT-EEEEEETTSCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCC-EEEEEEcCCCEEEeCEEEECCccc
Confidence 44556666777787 899999999999886522 456777 57789999999999964
No 136
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=92.35 E-value=0.35 Score=45.21 Aligned_cols=52 Identities=21% Similarity=0.291 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeC----C--eEEecCEEEEccCh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG----K--ETYSAGAVVLAVGI 218 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~----g--~~~~ad~VV~a~p~ 218 (355)
+.+.+.+.+++.|++|+++++|.+|+.+++ .+ .|.+. | ++++||.||+|+..
T Consensus 241 ~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~--~~-~v~~~~~~~g~~~~i~~D~Vi~a~G~ 298 (491)
T 3urh_A 241 VAKQLQRMLTKQGIDFKLGAKVTGAVKSGD--GA-KVTFEPVKGGEATTLDAEVVLIATGR 298 (491)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEETT--EE-EEEEEETTSCCCEEEEESEEEECCCC
T ss_pred HHHHHHHHHHhCCCEEEECCeEEEEEEeCC--EE-EEEEEecCCCceEEEEcCEEEEeeCC
Confidence 667788888899999999999999998764 24 34431 4 58999999999975
No 137
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=92.28 E-value=0.33 Score=43.91 Aligned_cols=58 Identities=12% Similarity=0.139 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhhH-HHhhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTL-QELIK 226 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~~-~~l~~ 226 (355)
+.+.|.+.+ .|++|+++++|++|+.++++ + .|++ +|++++||.||.|...+.. .+.+.
T Consensus 101 l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~--v-~v~~~~g~~~~ad~vV~AdG~~S~vr~~~~ 160 (397)
T 2vou_A 101 IYGGLYELF--GPERYHTSKCLVGLSQDSET--V-QMRFSDGTKAEANWVIGADGGASVVRKRLL 160 (397)
T ss_dssp HHHHHHHHH--CSTTEETTCCEEEEEECSSC--E-EEEETTSCEEEESEEEECCCTTCHHHHHHH
T ss_pred HHHHHHHhC--CCcEEEcCCEEEEEEecCCE--E-EEEECCCCEEECCEEEECCCcchhHHHHhc
Confidence 334444433 48999999999999988753 5 4666 6778999999999998753 45444
No 138
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.25 E-value=0.33 Score=44.87 Aligned_cols=53 Identities=17% Similarity=0.212 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe----CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|.+|..+++ .+ .|.+ +++++++|.||+|+...
T Consensus 213 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~--~~-~v~~~~~g~~~~~~~D~vv~a~G~~ 269 (455)
T 1ebd_A 213 MAAIIKKRLKKKGVEVVTNALAKGAEERED--GV-TVTYEANGETKTIDADYVLVTVGRR 269 (455)
T ss_dssp HHHHHHHHHHHTTCEEEESEEEEEEEEETT--EE-EEEEEETTEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEeCC--eE-EEEEEeCCceeEEEcCEEEECcCCC
Confidence 567778888899999999999999987653 24 3543 24679999999998753
No 139
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=92.24 E-value=0.27 Score=46.78 Aligned_cols=55 Identities=24% Similarity=0.119 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHcCc--EEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGC--EFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~--~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|. +|+++++|+++..+++++ .+.|++ +|+++.||.||+|+...
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~-~w~V~~~~G~~i~ad~lV~AtG~~ 158 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGL-RWTVRTDRGDEVSARFLVVAAGPL 158 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTT-EEEEEETTCCEEEEEEEEECCCSE
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCC-EEEEEECCCCEEEeCEEEECcCCC
Confidence 55566666777776 899999999999876522 456777 57789999999999954
No 140
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=92.20 E-value=0.2 Score=45.56 Aligned_cols=57 Identities=19% Similarity=0.196 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhh-HHHhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST-LQELI 225 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~-~~~l~ 225 (355)
+.+.|.+.+.+ ++|+++++|++|+.++++ + .|++ +|++++||.||.|...+. ..+.+
T Consensus 129 l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~--v-~v~~~~g~~~~a~~vV~AdG~~S~vr~~l 187 (407)
T 3rp8_A 129 LQREMLDYWGR--DSVQFGKRVTRCEEDADG--V-TVWFTDGSSASGDLLIAADGSHSALRPWV 187 (407)
T ss_dssp HHHHHHHHHCG--GGEEESCCEEEEEEETTE--E-EEEETTSCEEEESEEEECCCTTCSSHHHH
T ss_pred HHHHHHHhCCc--CEEEECCEEEEEEecCCc--E-EEEEcCCCEEeeCEEEECCCcChHHHHHh
Confidence 55566666655 899999999999998753 5 4666 678999999999999874 34444
No 141
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=92.16 E-value=0.35 Score=42.97 Aligned_cols=53 Identities=15% Similarity=0.246 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccCh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 218 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~ 218 (355)
+.+.+.+.+++.|.+++++++|++|..+++ +.+ .|.+ +|+++.+|.||+|+..
T Consensus 76 ~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~-~~~-~v~~~~g~~~~~~~li~AtG~ 129 (360)
T 3ab1_A 76 LVESLWAQAERYNPDVVLNETVTKYTKLDD-GTF-ETRTNTGNVYRSRAVLIAAGL 129 (360)
T ss_dssp HHHHHHHHHHTTCCEEECSCCEEEEEECTT-SCE-EEEETTSCEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHhCCEEEcCCEEEEEEECCC-ceE-EEEECCCcEEEeeEEEEccCC
Confidence 556677777778999999999999998764 223 5666 5678999999999976
No 142
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=92.09 E-value=0.32 Score=42.13 Aligned_cols=56 Identities=9% Similarity=0.168 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++++++++|+.|..+.+.+..+.|.+ +|+++.+|.||+|+...
T Consensus 58 ~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 58 LAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp HHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 556677777788999999999999986532011245666 56789999999999864
No 143
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=92.04 E-value=0.19 Score=45.74 Aligned_cols=49 Identities=10% Similarity=0.102 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++++++++|++|.. + +|++ +|++++||.||++++..
T Consensus 220 ~~~~~~~~l~~~gV~~~~~~~v~~i~~--~-----~v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 220 SRKAVASIYNQLGIKLVHNFKIKEIRE--H-----EIVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEECS--S-----EEEETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHHHHCCCEEEcCCceEEECC--C-----eEEECCCCEEeeeEEEECCCCC
Confidence 667788888999999999999999963 2 2444 78899999999998753
No 144
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=92.03 E-value=0.51 Score=41.31 Aligned_cols=53 Identities=17% Similarity=0.118 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe----CC--eEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g--~~~~ad~VV~a~p~~ 219 (355)
..+.+.+.+++.|++|++++.|.+|..++ ++.+|.+ +| +++++|.||+|++..
T Consensus 193 ~~~~l~~~l~~~gv~v~~~~~v~~i~~~~---~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2zbw_A 193 SVKELMKAHEEGRLEVLTPYELRRVEGDE---RVRWAVVFHNQTQEELALEVDAVLILAGYI 251 (335)
T ss_dssp HHHHHHHHHHTTSSEEETTEEEEEEEESS---SEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHHhccccCCeEEecCCcceeEccCC---CeeEEEEEECCCCceEEEecCEEEEeecCC
Confidence 44567777777899999999999998742 2445554 56 579999999999754
No 145
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=91.92 E-value=0.33 Score=42.49 Aligned_cols=52 Identities=17% Similarity=0.293 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|+++++++ |.+|..++++ + .|.++|+++++|.||+|+...
T Consensus 72 ~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~--~-~v~~~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 72 LTDKFRKQSERFGTTIFTET-VTKVDFSSKP--F-KLFTDSKAILADAVILAIGAV 123 (333)
T ss_dssp HHHHHHHHHHHTTCEEECCC-CCEEECSSSS--E-EEECSSEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHCCCEEEEeE-EEEEEEcCCE--E-EEEECCcEEEcCEEEECCCCC
Confidence 55667777788899999997 9999887642 3 466688899999999999875
No 146
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=91.87 E-value=0.41 Score=44.55 Aligned_cols=52 Identities=19% Similarity=0.319 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEe--cCCCCeEEEEEe------CCeEEecCEEEEccCh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIY--DEERCCISDVVC------GKETYSAGAVVLAVGI 218 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~--~~~~~~v~~v~~------~g~~~~ad~VV~a~p~ 218 (355)
+.+.+.+.+++.|++|+++++|++|.. ++ +.+ .|.+ ++++++||.||+|+..
T Consensus 226 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~~-~v~~~~~~~g~~~~~~~D~vv~a~G~ 285 (478)
T 1v59_A 226 VAKATQKFLKKQGLDFKLSTKVISAKRNDDK--NVV-EIVVEDTKTNKQENLEAEVLLVAVGR 285 (478)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEETTT--TEE-EEEEEETTTTEEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEecCC--CeE-EEEEEEcCCCCceEEECCEEEECCCC
Confidence 667788888899999999999999987 33 223 4544 2467999999999874
No 147
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=91.85 E-value=0.3 Score=47.13 Aligned_cols=54 Identities=15% Similarity=0.034 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHc-CcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~-G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.+.+.+++. |++| ++..|+.|..++ ++|.+|.+ +|+++.||.||+|+....
T Consensus 119 l~~~L~~~l~~~~GV~I-~~~~V~~L~~d~--g~V~GV~t~~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 119 YSLYMRRIVEHEPNIDL-LQDTVIGVSANS--GKFSSVTVRSGRAIQAKAAILACGTFL 174 (641)
T ss_dssp HHHHHHHHHHTCTTEEE-EECCEEEEEEET--TEEEEEEETTSCEEEEEEEEECCTTCB
T ss_pred HHHHHHHHHHhCCCCEE-EeeEEEEEEecC--CEEEEEEECCCcEEEeCEEEECcCCCC
Confidence 566777778774 8999 466999998876 45777877 678999999999998764
No 148
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=91.72 E-value=0.37 Score=44.74 Aligned_cols=53 Identities=17% Similarity=0.290 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe----CC--eEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g--~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|.+|..++++ + .|.+ +| +++++|.||+|+...
T Consensus 220 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~-~v~~~~~~~g~~~~~~~D~vv~a~G~~ 278 (470)
T 1dxl_A 220 IRKQFQRSLEKQGMKFKLKTKVVGVDTSGDG--V-KLTVEPSAGGEQTIIEADVVLVSAGRT 278 (470)
T ss_dssp HHHHHHHHHHHSSCCEECSEEEEEEECSSSS--E-EEEEEESSSCCCEEEEESEEECCCCEE
T ss_pred HHHHHHHHHHHcCCEEEeCCEEEEEEEcCCe--E-EEEEEecCCCcceEEECCEEEECCCCC
Confidence 6677888889999999999999999876532 4 3443 34 689999999998754
No 149
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=91.65 E-value=0.4 Score=41.98 Aligned_cols=53 Identities=17% Similarity=0.313 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|.+++++++|++|..+++ .+ .|.+ +|+++.+|.||+|+...
T Consensus 67 ~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~--~~-~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 67 LVKGLVEQVAPFNPVYSLGERAETLEREGD--LF-KVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp HHHHHHHHHGGGCCEEEESCCEEEEEEETT--EE-EEEETTSCEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHcCCEEEeCCEEEEEEECCC--EE-EEEECCCCEEEeCEEEECCCCC
Confidence 456677777778999999999999998763 23 5666 46689999999999863
No 150
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=91.22 E-value=0.51 Score=42.19 Aligned_cols=60 Identities=12% Similarity=0.056 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe--CCe--EEecCEEEEccChhhH-HHhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGISTL-QELI 225 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~g~--~~~ad~VV~a~p~~~~-~~l~ 225 (355)
+.+.|.+.+++.|++++++++|+++..++ +++.++.. +++ +++||.||-|...+.. .+.+
T Consensus 104 ~~~~L~~~a~~~G~~~~~~~~v~~~~~~~--~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~vr~~~ 168 (397)
T 3oz2_A 104 FDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWA 168 (397)
T ss_dssp HHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHhcCcEEeeeeeeeeeeecc--ceeeeeeecccccceEEEEeEEEeCCccccHHHHHc
Confidence 55667777888899999999999999887 44655644 443 6899999999988753 4433
No 151
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=91.10 E-value=0.46 Score=46.15 Aligned_cols=57 Identities=18% Similarity=0.243 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHc-Cc-EEEcCceeeEEEecCCC-CeEEEEEe----CCe--EEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTR-GC-EFLDGRRVTDFIYDEER-CCISDVVC----GKE--TYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~-G~-~i~l~~~V~~I~~~~~~-~~v~~v~~----~g~--~~~ad~VV~a~p~~~ 220 (355)
+...+.+.+++. |+ +|+.+++|++|..++++ |+|.+|.. +|+ ++.|+.||+|+....
T Consensus 153 ~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 153 YKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp HHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 556677777777 99 99999999999987630 16888763 344 689999999998764
No 152
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=90.94 E-value=0.3 Score=45.74 Aligned_cols=49 Identities=16% Similarity=0.281 Sum_probs=39.3
Q ss_pred HHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 168 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 168 l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+++.|++|++++.|.+|..++ ++.+|.+ +|++++||.||+|+...
T Consensus 263 le~~l~~~GV~v~~~~~v~~i~~~~---~v~~v~~~~g~~i~aD~Vv~a~G~~ 312 (493)
T 1y56_A 263 VIQELERWGIDYVHIPNVKRVEGNE---KVERVIDMNNHEYKVDALIFADGRR 312 (493)
T ss_dssp HHHHHHHHTCEEEECSSEEEEECSS---SCCEEEETTCCEEECSEEEECCCEE
T ss_pred HHHHHHhCCcEEEeCCeeEEEecCC---ceEEEEeCCCeEEEeCEEEECCCcC
Confidence 4467788999999999999998643 2445666 57899999999999864
No 153
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=90.76 E-value=0.58 Score=44.35 Aligned_cols=52 Identities=19% Similarity=0.103 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccCh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 218 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~ 218 (355)
+.+.+.+.+++.|.++++++.|.+++..++ .+ .|.+ +++++.+|.|++|+.-
T Consensus 265 i~~~l~~~l~~~gi~~~~~~~v~~~~~~~~--~~-~v~~~~~~~~~~D~vLvAvGR 317 (542)
T 4b1b_A 265 CAVKVKLYMEEQGVMFKNGILPKKLTKMDD--KI-LVEFSDKTSELYDTVLYAIGR 317 (542)
T ss_dssp HHHHHHHHHHHTTCEEEETCCEEEEEEETT--EE-EEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHhhcceeecceEEEEEEecCC--eE-EEEEcCCCeEEEEEEEEcccc
Confidence 667788889999999999999999998874 35 4655 6778899999999964
No 154
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=90.74 E-value=0.41 Score=45.46 Aligned_cols=56 Identities=16% Similarity=0.138 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHcCc--EEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTRGC--EFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~G~--~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.+.+.+++.|. +|+++++|+++..+++++ .+.|++ +|++++||.||+|+....
T Consensus 89 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~-~w~V~~~~G~~~~ad~lV~AtG~~s 147 (545)
T 3uox_A 89 MLRYVNRAADAMDVRKHYRFNTRVTAARYVENDR-LWEVTLDNEEVVTCRFLISATGPLS 147 (545)
T ss_dssp HHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGT-EEEEEETTTEEEEEEEEEECCCSCB
T ss_pred HHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCC-EEEEEECCCCEEEeCEEEECcCCCC
Confidence 44556566666676 899999999999876422 456777 678999999999999643
No 155
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=90.54 E-value=0.38 Score=44.33 Aligned_cols=53 Identities=17% Similarity=-0.100 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-C---Ce---EEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G---KE---TYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~---g~---~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.+..|+++++|++|..+++ . +.|++ + |+ ++.||.||+|+...
T Consensus 117 l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~--~-~~V~~~~~~~G~~~~~~~~d~VVvAtG~~ 176 (447)
T 2gv8_A 117 IQEYQRIYAQPLLPFIKLATDVLDIEKKDG--S-WVVTYKGTKAGSPISKDIFDAVSICNGHY 176 (447)
T ss_dssp HHHHHHHHHGGGGGGEECSEEEEEEEEETT--E-EEEEEEESSTTCCEEEEEESEEEECCCSS
T ss_pred HHHHHHHHHHHhhCeEEeCCEEEEEEeCCC--e-EEEEEeecCCCCeeEEEEeCEEEECCCCC
Confidence 445555556666778999999999988763 2 34554 3 65 79999999999863
No 156
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=90.38 E-value=0.88 Score=39.97 Aligned_cols=56 Identities=13% Similarity=0.268 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHc-CcEEEcCceeeEEEecC--CCC--eEEEEEe---------------CCeEEec--------------
Q 018455 164 IFEPWMDSMRTR-GCEFLDGRRVTDFIYDE--ERC--CISDVVC---------------GKETYSA-------------- 209 (355)
Q Consensus 164 l~~~l~~~l~~~-G~~i~l~~~V~~I~~~~--~~~--~v~~v~~---------------~g~~~~a-------------- 209 (355)
+...|.+.+.+. |++|+.+++|.+|..++ ++| +|.+|.+ ++.++.|
T Consensus 148 ~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~ 227 (326)
T 2gjc_A 148 FISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQK 227 (326)
T ss_dssp HHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTT
T ss_pred HHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeecccccccccccc
Confidence 456677777664 89999999999999874 213 6778764 2357999
Q ss_pred -CEEEEccChh
Q 018455 210 -GAVVLAVGIS 219 (355)
Q Consensus 210 -d~VV~a~p~~ 219 (355)
|.||.|+...
T Consensus 228 ~~~VV~ATG~~ 238 (326)
T 2gjc_A 228 HGVILSTTGHD 238 (326)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECcCCC
Confidence 9999999865
No 157
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=90.35 E-value=0.47 Score=42.86 Aligned_cols=44 Identities=14% Similarity=0.088 Sum_probs=35.6
Q ss_pred HHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccCh
Q 018455 170 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 218 (355)
Q Consensus 170 ~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~ 218 (355)
+.+++.|.+++++++|++|..++ + .|++ +|+++.+|++|+||..
T Consensus 70 ~~~~~~~i~~~~~~~V~~id~~~--~---~v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 70 DWYEKNNIKVITSEFATSIDPNN--K---LVTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp HHHHHTTCEEECSCCEEEEETTT--T---EEEETTSCEEECSEEEECCCE
T ss_pred HHHHHCCCEEEeCCEEEEEECCC--C---EEEECCCCEEECCEEEEecCC
Confidence 44567899999999999998765 2 3555 6789999999999875
No 158
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=90.35 E-value=0.47 Score=44.04 Aligned_cols=55 Identities=13% Similarity=0.105 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHcCcE--EEcCceeeEEEecCCCCeEEEEEe-C---C--eEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCE--FLDGRRVTDFIYDEERCCISDVVC-G---K--ETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~--i~l~~~V~~I~~~~~~~~v~~v~~-~---g--~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|.+ |+++++|++|..+++++ .+.|++ + | +++.||.||+|+...
T Consensus 103 l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~-~~~V~~~~~~~g~~~~~~~d~VVvAtG~~ 165 (464)
T 2xve_A 103 LWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQ-TFTVTVQDHTTDTIYSEEFDYVVCCTGHF 165 (464)
T ss_dssp HHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTT-EEEEEEEETTTTEEEEEEESEEEECCCSS
T ss_pred HHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCC-cEEEEEEEcCCCceEEEEcCEEEECCCCC
Confidence 445566666667877 99999999999876422 235654 2 4 578999999999953
No 159
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=90.30 E-value=0.43 Score=43.69 Aligned_cols=50 Identities=10% Similarity=-0.014 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe---CCeEEecCEEEEccCh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKETYSAGAVVLAVGI 218 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~---~g~~~~ad~VV~a~p~ 218 (355)
+.+.+.+.+++.|++|+++++|++|+.+ .+ .+.. ++++++||.||++++.
T Consensus 202 ~~~~l~~~l~~~GV~i~~~~~v~~v~~~----~v-~~~~~~~~g~~i~~D~vv~a~G~ 254 (430)
T 3h28_A 202 SKRLVEDLFAERNIDWIANVAVKAIEPD----KV-IYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEECSS----EE-EEECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeCC----eE-EEEecCCCceEEeeeEEEECCCC
Confidence 5567888899999999999999999632 13 2332 1678999999998653
No 160
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=90.29 E-value=0.6 Score=40.33 Aligned_cols=50 Identities=10% Similarity=0.242 Sum_probs=37.3
Q ss_pred HHHHHHHH-cCcEEEcCceeeEEEecCCCCeEEEEEe----CC--eEEecCEEEEccCh
Q 018455 167 PWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGI 218 (355)
Q Consensus 167 ~l~~~l~~-~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g--~~~~ad~VV~a~p~ 218 (355)
.+.+.+++ .|++|+++++|++|..++ +++.+|.+ +| .++.+|.||+|++.
T Consensus 184 ~~~~~l~~~~gv~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 240 (310)
T 1fl2_A 184 VLQDKLRSLKNVDIILNAQTTEVKGDG--SKVVGLEYRDRVSGDIHNIELAGIFVQIGL 240 (310)
T ss_dssp HHHHHHHTCTTEEEESSEEEEEEEESS--SSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHhhCCCeEEecCCceEEEEcCC--CcEEEEEEEECCCCcEEEEEcCEEEEeeCC
Confidence 35566666 699999999999998765 34555654 24 36899999999864
No 161
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=90.24 E-value=0.23 Score=48.76 Aligned_cols=50 Identities=12% Similarity=0.040 Sum_probs=38.5
Q ss_pred HHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe----CCeEEecCEEEEccChh
Q 018455 165 FEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 165 ~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~~~~ad~VV~a~p~~ 219 (355)
...+.+.+++.|++|+++++|++|..++ + .+.. ++++++||.||+|+...
T Consensus 570 ~~~l~~~l~~~GV~i~~~~~V~~i~~~~----~-~v~~~~~~~~~~i~aD~VV~A~G~~ 623 (690)
T 3k30_A 570 VNRIQRRLIENGVARVTDHAVVAVGAGG----V-TVRDTYASIERELECDAVVMVTARL 623 (690)
T ss_dssp HHHHHHHHHHTTCEEEESEEEEEEETTE----E-EEEETTTCCEEEEECSEEEEESCEE
T ss_pred HHHHHHHHHHCCCEEEcCcEEEEEECCe----E-EEEEccCCeEEEEECCEEEECCCCC
Confidence 4567788889999999999999998432 2 2332 34689999999999764
No 162
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=90.13 E-value=0.46 Score=45.08 Aligned_cols=57 Identities=14% Similarity=0.226 Sum_probs=42.8
Q ss_pred HHHHHHHH-cCcEEEcCceeeEEEecCCCCeEEEEEe-C---Ce--EE---ecCEEEEccChhhHHHhh
Q 018455 167 PWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC-G---KE--TY---SAGAVVLAVGISTLQELI 225 (355)
Q Consensus 167 ~l~~~l~~-~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~---g~--~~---~ad~VV~a~p~~~~~~l~ 225 (355)
.+.+.+.+ .|++|++++.|++|..++ +++++|.+ + |+ ++ .++.||+|+.+....+|+
T Consensus 200 ~~l~~~~~~~~~~i~~~~~V~~i~~~~--~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL 266 (546)
T 1kdg_A 200 TYLQTALARPNFTFKTNVMVSNVVRNG--SQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRIL 266 (546)
T ss_dssp THHHHHHTCTTEEEECSCCEEEEEEET--TEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHH
T ss_pred HHHHHHhhCCCcEEEeCCEEEEEEEeC--CEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHH
Confidence 34455544 589999999999999976 56888887 3 53 33 789999999987665554
No 163
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=90.08 E-value=0.85 Score=42.52 Aligned_cols=54 Identities=19% Similarity=0.196 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-C---Ce--EEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G---KE--TYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~---g~--~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|.+|...++ +.+ .|++ + |+ +++||.||+|+...
T Consensus 227 ~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~-~~~-~v~~~~~~~g~~~~~~~D~vi~a~G~~ 286 (488)
T 3dgz_A 227 MSSLVTEHMESHGTQFLKGCVPSHIKKLPT-NQL-QVTWEDHASGKEDTGTFDTVLWAIGRV 286 (488)
T ss_dssp HHHHHHHHHHHTTCEEEETEEEEEEEECTT-SCE-EEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEcCC-CcE-EEEEEeCCCCeeEEEECCEEEEcccCC
Confidence 667788888999999999999999987544 333 3443 2 55 47899999998753
No 164
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=90.03 E-value=0.33 Score=43.95 Aligned_cols=42 Identities=17% Similarity=0.155 Sum_probs=34.8
Q ss_pred CcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhh
Q 018455 176 GCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (355)
Q Consensus 176 G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~ 220 (355)
+++|+++++|++|+.++++ + .|++ +|++++||.||.|.....
T Consensus 140 ~~~i~~~~~v~~i~~~~~~--v-~v~~~~g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 140 NDTVIWDRKLVMLEPGKKK--W-TLTFENKPSETADLVILANGGMS 182 (398)
T ss_dssp TTSEEESCCEEEEEECSSS--E-EEEETTSCCEEESEEEECSCTTC
T ss_pred CCEEEECCEEEEEEECCCE--E-EEEECCCcEEecCEEEECCCcch
Confidence 3689999999999988753 5 4666 677899999999999865
No 165
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=90.01 E-value=0.98 Score=42.17 Aligned_cols=52 Identities=21% Similarity=0.141 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe---CC--eEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK--ETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~---~g--~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++. ++|+++++|++|+.++++ +. |.+ +| ++++||.||+|+...
T Consensus 217 ~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~--v~-v~~~~~~G~~~~i~~D~Vi~a~G~~ 273 (492)
T 3ic9_A 217 MKRYAEKTFNEE-FYFDAKARVISTIEKEDA--VE-VIYFDKSGQKTTESFQYVLAATGRK 273 (492)
T ss_dssp HHHHHHHHHHTT-SEEETTCEEEEEEECSSS--EE-EEEECTTCCEEEEEESEEEECSCCE
T ss_pred HHHHHHHHHhhC-cEEEECCEEEEEEEcCCE--EE-EEEEeCCCceEEEECCEEEEeeCCc
Confidence 566777777777 999999999999987643 53 544 56 689999999998753
No 166
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=90.00 E-value=0.54 Score=44.35 Aligned_cols=56 Identities=7% Similarity=0.196 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++++.+++|++|..+.+.+..+.|.+ +|+++.+|.||+|+...
T Consensus 269 l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 269 LAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp HHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCC
Confidence 556677777888999999999999986421011235766 57789999999999864
No 167
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=89.93 E-value=0.84 Score=40.39 Aligned_cols=57 Identities=16% Similarity=0.258 Sum_probs=42.8
Q ss_pred HHHHHHHHHHH-cCcEEEcCceeeEEEecCC-----------------CCeEEEEEe-------CC--------eEEecC
Q 018455 164 IFEPWMDSMRT-RGCEFLDGRRVTDFIYDEE-----------------RCCISDVVC-------GK--------ETYSAG 210 (355)
Q Consensus 164 l~~~l~~~l~~-~G~~i~l~~~V~~I~~~~~-----------------~~~v~~v~~-------~g--------~~~~ad 210 (355)
+.+.|.+.+.+ .|++|+.++.|.+|..+++ +.+|.+|.+ +| .+++|+
T Consensus 162 ~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak 241 (344)
T 3jsk_A 162 FTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAP 241 (344)
T ss_dssp HHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECS
T ss_pred HHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcC
Confidence 44667777776 5899999999999998762 126777765 12 479999
Q ss_pred EEEEccChhh
Q 018455 211 AVVLAVGIST 220 (355)
Q Consensus 211 ~VV~a~p~~~ 220 (355)
.||.|+....
T Consensus 242 ~VV~ATG~~s 251 (344)
T 3jsk_A 242 VIISTTGHDG 251 (344)
T ss_dssp EEEECCCSSS
T ss_pred EEEECCCCCc
Confidence 9999998763
No 168
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=89.88 E-value=0.58 Score=43.12 Aligned_cols=56 Identities=18% Similarity=0.265 Sum_probs=43.4
Q ss_pred cchHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChh
Q 018455 160 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (355)
Q Consensus 160 ~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~ 219 (355)
...-+.+.+.+.+++. ++++++++|.+|..++ ++..+..+|++++||.||+|+...
T Consensus 188 ~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~---~v~~v~~~g~~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 188 FDKEVTDILEEKLKKH-VNLRLQEITMKIEGEE---RVEKVVTDAGEYKAELVILATGIK 243 (449)
T ss_dssp SCHHHHHHHHHHHTTT-SEEEESCCEEEEECSS---SCCEEEETTEEEECSEEEECSCEE
T ss_pred cCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccC---cEEEEEeCCCEEECCEEEEeeCCc
Confidence 3333566777778888 9999999999998654 244566788999999999999754
No 169
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=89.48 E-value=0.67 Score=43.90 Aligned_cols=55 Identities=16% Similarity=0.018 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHcC--cEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRG--CEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G--~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+...+++.+ .+|+++++|+++..+++++ .+.|++ +|++++||.||+|+...
T Consensus 96 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~-~w~V~~~~G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 96 ILRYINFVADKFDLRSGITFHTTVTAAAFDEATN-TWTVDTNHGDRIRARYLIMASGQL 153 (542)
T ss_dssp HHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTT-EEEEEETTCCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCC-eEEEEECCCCEEEeCEEEECcCCC
Confidence 3344444455544 6899999999999876422 446777 57789999999999864
No 170
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=89.44 E-value=0.6 Score=40.64 Aligned_cols=49 Identities=14% Similarity=0.262 Sum_probs=37.2
Q ss_pred HHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-C-----CeEEecCEEEEccChh
Q 018455 168 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G-----KETYSAGAVVLAVGIS 219 (355)
Q Consensus 168 l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~-----g~~~~ad~VV~a~p~~ 219 (355)
..+.+++.|++++++++|.+|..+++ +.+|++ + ++++++|.||+|++..
T Consensus 195 ~~~~l~~~gv~~~~~~~v~~i~~~~~---~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 249 (332)
T 3lzw_A 195 SVENLHASKVNVLTPFVPAELIGEDK---IEQLVLEEVKGDRKEILEIDDLIVNYGFV 249 (332)
T ss_dssp HHHHHHHSSCEEETTEEEEEEECSSS---CCEEEEEETTSCCEEEEECSEEEECCCEE
T ss_pred HHHHHhcCCeEEEeCceeeEEecCCc---eEEEEEEecCCCceEEEECCEEEEeeccC
Confidence 44557889999999999999987653 334554 2 3578999999998753
No 171
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=89.37 E-value=0.56 Score=45.65 Aligned_cols=57 Identities=16% Similarity=0.205 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHc--CcEEEcCceeeEEEecCCC-CeEEEEEe----CCe--EEecCEEEEccChhh
Q 018455 164 IFEPWMDSMRTR--GCEFLDGRRVTDFIYDEER-CCISDVVC----GKE--TYSAGAVVLAVGIST 220 (355)
Q Consensus 164 l~~~l~~~l~~~--G~~i~l~~~V~~I~~~~~~-~~v~~v~~----~g~--~~~ad~VV~a~p~~~ 220 (355)
+...|.+.+++. |++|+.++.|.+|..++++ |+|.+|.. +|+ ++.|+.||+|+....
T Consensus 168 i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 168 YKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAV 233 (662)
T ss_dssp HHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccc
Confidence 556788888777 9999999999999987630 26888854 343 689999999998654
No 172
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=89.32 E-value=0.5 Score=44.87 Aligned_cols=51 Identities=22% Similarity=0.350 Sum_probs=39.9
Q ss_pred HcCcEEEcCceeeEEEecCCCCeEEEEEe-C---Ce--EEecC-EEEEccChhhHHHhh
Q 018455 174 TRGCEFLDGRRVTDFIYDEERCCISDVVC-G---KE--TYSAG-AVVLAVGISTLQELI 225 (355)
Q Consensus 174 ~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~---g~--~~~ad-~VV~a~p~~~~~~l~ 225 (355)
+.|++|++++.|++|..+++ +++++|.+ + |+ ++.|+ .||+|+.+....+|+
T Consensus 221 ~~~~~i~~~~~V~~i~~~~~-~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL 278 (546)
T 2jbv_A 221 QENFTLLTGLRARQLVFDAD-RRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLL 278 (546)
T ss_dssp CTTEEEECSCEEEEEEECTT-SBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHH
T ss_pred CCCcEEEeCCEEEEEEECCC-CeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhh
Confidence 46899999999999999763 45778876 3 53 68898 899999986555554
No 173
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=89.31 E-value=0.49 Score=43.68 Aligned_cols=55 Identities=11% Similarity=-0.054 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEE--EEEe-CCe----EEecCEEEEccCh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCIS--DVVC-GKE----TYSAGAVVLAVGI 218 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~--~v~~-~g~----~~~ad~VV~a~p~ 218 (355)
+.+.+...+++.|.+|+++++|++|..++++++.+ .|++ +|+ ++.||.||+|+..
T Consensus 129 ~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 129 FNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp HHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 44445555566788999999999999863212333 3444 443 8999999999985
No 174
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=89.30 E-value=0.86 Score=41.32 Aligned_cols=58 Identities=16% Similarity=0.134 Sum_probs=42.3
Q ss_pred HHHHHHHHHHH-cC-cEEEcCceeeEEEecCCCCeEEEEEe-C---C--eEEecCEEEEccChhhH-HHhh
Q 018455 164 IFEPWMDSMRT-RG-CEFLDGRRVTDFIYDEERCCISDVVC-G---K--ETYSAGAVVLAVGISTL-QELI 225 (355)
Q Consensus 164 l~~~l~~~l~~-~G-~~i~l~~~V~~I~~~~~~~~v~~v~~-~---g--~~~~ad~VV~a~p~~~~-~~l~ 225 (355)
+.+.|.+.+.+ .| ++|+++++|++|+. +++ + .|++ + | ++++||.||.|...... .+.+
T Consensus 109 l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~--v-~v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l 175 (410)
T 3c96_A 109 LQMILLAAVRERLGQQAVRTGLGVERIEE-RDG--R-VLIGARDGHGKPQALGADVLVGADGIHSAVRAHL 175 (410)
T ss_dssp HHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT--E-EEEEEEETTSCEEEEEESEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc--c-EEEEecCCCCCceEEecCEEEECCCccchhHHHh
Confidence 55667777765 46 58999999999998 543 5 3543 3 6 57999999999998753 4444
No 175
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=89.26 E-value=0.66 Score=43.51 Aligned_cols=55 Identities=13% Similarity=0.100 Sum_probs=39.8
Q ss_pred cchHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CC----eEEecCEEEEccC
Q 018455 160 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK----ETYSAGAVVLAVG 217 (355)
Q Consensus 160 ~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g----~~~~ad~VV~a~p 217 (355)
+...+.+.+.+.+++.|++|++|++|++|+.+ +.+..+.. +| +++.||.||.|+.
T Consensus 270 ~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~---~~~~~~~~~dg~~~~~~i~ad~viwa~G 329 (502)
T 4g6h_A 270 FEKKLSSYAQSHLENTSIKVHLRTAVAKVEEK---QLLAKTKHEDGKITEETIPYGTLIWATG 329 (502)
T ss_dssp SCHHHHHHHHHHHHHTTCEEETTEEEEEECSS---EEEEEEECTTSCEEEEEEECSEEEECCC
T ss_pred CCHHHHHHHHHHHHhcceeeecCceEEEEeCC---ceEEEEEecCcccceeeeccCEEEEccC
Confidence 44446777888899999999999999998632 21222232 33 4689999999885
No 176
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=88.93 E-value=1.2 Score=38.45 Aligned_cols=51 Identities=18% Similarity=0.193 Sum_probs=37.0
Q ss_pred HHHHHHH-HcCcEEEcCceeeEEEecCCCCeEEEEEe----CCe--EEecCEEEEccChh
Q 018455 167 PWMDSMR-TRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIS 219 (355)
Q Consensus 167 ~l~~~l~-~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~--~~~ad~VV~a~p~~ 219 (355)
.+.+.+. +.|++|+++++|.+|..++ +++.+|.+ +|+ +++||.||+|++..
T Consensus 183 ~~~~~l~~~~gv~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 240 (311)
T 2q0l_A 183 ITLEHAKNNDKIEFLTPYVVEEIKGDA--SGVSSLSIKNTATNEKRELVVPGFFIFVGYD 240 (311)
T ss_dssp HHHHHHHTCTTEEEETTEEEEEEEEET--TEEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHHHHhhCCCeEEEeCCEEEEEECCC--CcEeEEEEEecCCCceEEEecCEEEEEecCc
Confidence 3455554 4799999999999998764 23444543 454 78999999999753
No 177
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=88.92 E-value=0.62 Score=44.99 Aligned_cols=52 Identities=12% Similarity=0.137 Sum_probs=40.2
Q ss_pred cCcEEEcCceeeEEEecCCCCeEEEEEe----CCe--EEecCEEEEccChhhHHHhhh
Q 018455 175 RGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGISTLQELIK 226 (355)
Q Consensus 175 ~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~--~~~ad~VV~a~p~~~~~~l~~ 226 (355)
.|++|++++.|++|..+++++++++|++ +|+ +++||.||+|+......+++.
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~ 330 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLV 330 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHH
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHH
Confidence 4789999999999998764346888875 243 688999999999876655543
No 178
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=88.48 E-value=0.84 Score=39.44 Aligned_cols=52 Identities=15% Similarity=0.223 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|.++++ ++|.+|..+++ .+ .|.+ +|+++.+|.||+|+...
T Consensus 72 ~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~--~~-~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 72 MIKVFNKHIEKYEVPVLL-DIVEKIENRGD--EF-VVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHHHTTTCCEEE-SCEEEEEEC----CE-EEEESSSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHcCCEEEE-EEEEEEEecCC--EE-EEEECCCCEEEcCEEEECcCCC
Confidence 556677777788999999 99999998763 23 4666 45899999999998765
No 179
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=88.13 E-value=0.7 Score=41.34 Aligned_cols=48 Identities=19% Similarity=0.241 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|++|. .+ +|++ +|+ +++|.||+|+...
T Consensus 185 ~~~~l~~~l~~~gV~i~~~~~v~~i~--~~-----~v~~~~g~-i~~D~vi~a~G~~ 233 (367)
T 1xhc_A 185 LSNMIKDMLEETGVKFFLNSELLEAN--EE-----GVLTNSGF-IEGKVKICAIGIV 233 (367)
T ss_dssp HHHHHHHHHHHTTEEEECSCCEEEEC--SS-----EEEETTEE-EECSCEEEECCEE
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEE--ee-----EEEECCCE-EEcCEEEECcCCC
Confidence 56777888899999999999999997 21 3555 566 9999999998743
No 180
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=87.79 E-value=1.2 Score=38.31 Aligned_cols=52 Identities=19% Similarity=0.331 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|+++++ ++|.+|..+++ .+ .|.+ +|+++++|.||+|+...
T Consensus 61 ~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~--~~-~v~~~~g~~~~~~~vv~AtG~~ 113 (311)
T 2q0l_A 61 FMQPWQEQCFRFGLKHEM-TAVQRVSKKDS--HF-VILAEDGKTFEAKSVIIATGGS 113 (311)
T ss_dssp HHHHHHHHHHTTSCEEEC-SCEEEEEEETT--EE-EEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHcCCEEEE-EEEEEEEEcCC--EE-EEEEcCCCEEECCEEEECCCCC
Confidence 556666777778999998 89999998763 23 4655 67789999999999853
No 181
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=87.67 E-value=1.4 Score=38.43 Aligned_cols=49 Identities=12% Similarity=0.180 Sum_probs=36.0
Q ss_pred HHHHcCcEEEcCceeeEEEecCCCCeEEEEEe----CC--eEEecCEEEEccChh
Q 018455 171 SMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGIS 219 (355)
Q Consensus 171 ~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g--~~~~ad~VV~a~p~~ 219 (355)
.+++.|++|+++++|.+|..+++++++.+|.+ +| ++++||.||+++...
T Consensus 204 ~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 258 (333)
T 1vdc_A 204 ALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHE 258 (333)
T ss_dssp HHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCc
Confidence 34668999999999999987653114544544 34 578999999998753
No 182
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=87.56 E-value=0.26 Score=44.64 Aligned_cols=45 Identities=20% Similarity=0.119 Sum_probs=35.7
Q ss_pred HHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 172 l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+++.|++|++++.|..++.++++ . .|.+ +|++++||.||+++|..
T Consensus 212 l~~~gi~v~~~~~v~~v~~~~~~--~-~v~~~~g~~i~~D~vi~~~g~~ 257 (401)
T 3vrd_B 212 TENALIEWHPGPDAAVVKTDTEA--M-TVETSFGETFKAAVINLIPPQR 257 (401)
T ss_dssp STTCSEEEECTTTTCEEEEETTT--T-EEEETTSCEEECSEEEECCCEE
T ss_pred HHhcCcEEEeCceEEEEEecccc--e-EEEcCCCcEEEeeEEEEecCcC
Confidence 34678999999999999987643 3 4655 68899999999987643
No 183
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=87.48 E-value=1.4 Score=38.04 Aligned_cols=50 Identities=18% Similarity=0.405 Sum_probs=36.4
Q ss_pred HHHHHH-HcCcEEEcCceeeEEEecCCCCeEEEEEe-C---Ce--EEecCEEEEccChhh
Q 018455 168 WMDSMR-TRGCEFLDGRRVTDFIYDEERCCISDVVC-G---KE--TYSAGAVVLAVGIST 220 (355)
Q Consensus 168 l~~~l~-~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~---g~--~~~ad~VV~a~p~~~ 220 (355)
+.+.+. +.|++++++++|.+|..++ + +.+|.+ + |+ ++++|.||++++...
T Consensus 195 ~~~~~~~~~gv~~~~~~~v~~i~~~~--~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 251 (323)
T 3f8d_A 195 YVETVKKKPNVEFVLNSVVKEIKGDK--V-VKQVVVENLKTGEIKELNVNGVFIEIGFDP 251 (323)
T ss_dssp HHHHHHTCTTEEEECSEEEEEEEESS--S-EEEEEEEETTTCCEEEEECSEEEECCCEEC
T ss_pred HHHHHHhCCCcEEEeCCEEEEEeccC--c-eeEEEEEECCCCceEEEEcCEEEEEECCCC
Confidence 344444 4599999999999998763 2 445654 3 65 789999999997644
No 184
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=87.37 E-value=0.65 Score=42.67 Aligned_cols=48 Identities=10% Similarity=0.199 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccCh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 218 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~ 218 (355)
+.+.+.+.+++.|++|+++++|+++.. . .|++ +|++++||.||+|+..
T Consensus 190 ~~~~~~~~l~~~gV~i~~~~~v~~~~~----~---~v~~~~g~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 190 MNQPILDELDKREIPYRLNEEINAING----N---EITFKSGKVEHYDMIIEGVGT 238 (437)
T ss_dssp GGHHHHHHHHHTTCCEEESCCEEEEET----T---EEEETTSCEEECSEEEECCCE
T ss_pred hHHHHHHHhhccceEEEeccEEEEecC----C---eeeecCCeEEeeeeEEEEece
Confidence 567788889999999999999998862 1 2444 7889999999999874
No 185
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=87.19 E-value=1.1 Score=38.81 Aligned_cols=52 Identities=15% Similarity=0.180 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|+++++ ++|.+|..+++ .+ .|.++++++.+|.||+|+...
T Consensus 74 ~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~--~~-~v~~~~~~~~~~~li~AtG~~ 125 (319)
T 3cty_A 74 LAKLFADHAANYAKIREG-VEVRSIKKTQG--GF-DIETNDDTYHAKYVIITTGTT 125 (319)
T ss_dssp HHHHHHHHHHTTSEEEET-CCEEEEEEETT--EE-EEEESSSEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHcCCEEEE-eeEEEEEEeCC--EE-EEEECCCEEEeCEEEECCCCC
Confidence 455666777778999988 78999998763 23 466677889999999999864
No 186
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=87.18 E-value=1 Score=41.28 Aligned_cols=49 Identities=10% Similarity=0.008 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe---C-----CeEEecCEEEEccC
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---G-----KETYSAGAVVLAVG 217 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~---~-----g~~~~ad~VV~a~p 217 (355)
..+.+.+.+++.|++++++++|++|+.+ .+. +.. + ++++++|.||++++
T Consensus 210 ~~~~~~~~l~~~gI~~~~~~~v~~v~~~----~v~-~~~~~~~g~~~~~~~i~~D~vv~~~g 266 (437)
T 3sx6_A 210 SKGILTKGLKEEGIEAYTNCKVTKVEDN----KMY-VTQVDEKGETIKEMVLPVKFGMMIPA 266 (437)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEETT----EEE-EEEECTTSCEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEECC----eEE-EEecccCCccccceEEEEeEEEEcCC
Confidence 4566778889999999999999999732 132 322 2 46789999999865
No 187
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=87.18 E-value=1.4 Score=38.34 Aligned_cols=52 Identities=17% Similarity=0.273 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe----CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|+++++++ |.+|..+++ .+ .+.+ ++.++.+|.||+|+...
T Consensus 86 ~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~--~~-~v~~~~~~~~~~~~~d~vvlAtG~~ 141 (338)
T 3itj_A 86 LMDRMREQSTKFGTEIITET-VSKVDLSSK--PF-KLWTEFNEDAEPVTTDAIILATGAS 141 (338)
T ss_dssp HHHHHHHHHHHTTCEEECSC-EEEEECSSS--SE-EEEETTCSSSCCEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHcCCEEEEeE-EEEEEEcCC--EE-EEEEEecCCCcEEEeCEEEECcCCC
Confidence 55677777888899999999 999998764 24 4555 46789999999998763
No 188
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=86.69 E-value=0.84 Score=42.17 Aligned_cols=51 Identities=22% Similarity=0.290 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CC--eEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK--ETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g--~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|+++++|++|.. + + + .+.. +| +++++|.||+|+...
T Consensus 214 ~~~~l~~~l~~~gv~i~~~~~v~~i~~-~--~-v-~v~~~~G~~~~i~~D~vv~a~G~~ 267 (458)
T 1lvl_A 214 LTAPVAESLKKLGIALHLGHSVEGYEN-G--C-L-LANDGKGGQLRLEADRVLVAVGRR 267 (458)
T ss_dssp HHHHHHHHHHHHTCEEETTCEEEEEET-T--E-E-EEECSSSCCCEECCSCEEECCCEE
T ss_pred HHHHHHHHHHHCCCEEEECCEEEEEEe-C--C-E-EEEECCCceEEEECCEEEECcCCC
Confidence 566777888889999999999999986 3 3 4 3444 35 589999999999753
No 189
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=86.26 E-value=2.9 Score=38.40 Aligned_cols=42 Identities=21% Similarity=0.162 Sum_probs=32.8
Q ss_pred cCcEEEcCceeeEEEecCCCCeEEEEEe----CCe--EEecCEEEEccChh
Q 018455 175 RGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIS 219 (355)
Q Consensus 175 ~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~--~~~ad~VV~a~p~~ 219 (355)
.|++|+++++|++|..+++ .+ .|++ +|+ +++||.||+|+...
T Consensus 329 ~~v~i~~~~~v~~v~~~~~--~~-~v~~~~~~~g~~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQ--GI-ELALRDAGSGELSVETYDAVILATGYE 376 (463)
T ss_dssp CCSEEETTEEEEEEEEETT--EE-EEEEEETTTCCEEEEEESEEEECCCEE
T ss_pred CCeEEEeCCEEEEEEecCC--EE-EEEEEEcCCCCeEEEECCEEEEeeCCC
Confidence 5899999999999998763 23 4554 454 48999999999864
No 190
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=86.20 E-value=1.5 Score=39.28 Aligned_cols=50 Identities=10% Similarity=-0.003 Sum_probs=38.8
Q ss_pred HcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhhH-HHhh
Q 018455 174 TRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTL-QELI 225 (355)
Q Consensus 174 ~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~~-~~l~ 225 (355)
..+.+|+++++|++++..++ +.| .|++ ||++++||.||-|-..+.. .+.+
T Consensus 121 ~~~~~v~~~~~v~~~~~~~~-~~v-~v~~~dG~~~~adlvVgADG~~S~vR~~l 172 (412)
T 4hb9_A 121 GLANTIQWNKTFVRYEHIEN-GGI-KIFFADGSHENVDVLVGADGSNSKVRKQY 172 (412)
T ss_dssp TCTTTEECSCCEEEEEECTT-SCE-EEEETTSCEEEESEEEECCCTTCHHHHHH
T ss_pred hccceEEEEEEEEeeeEcCC-CeE-EEEECCCCEEEeeEEEECCCCCcchHHHh
Confidence 34678999999999998766 345 4666 7889999999999998754 4443
No 191
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=86.05 E-value=2 Score=40.66 Aligned_cols=56 Identities=13% Similarity=0.199 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-C---C--eEEecCEEEEccChhh-HHHhh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G---K--ETYSAGAVVLAVGIST-LQELI 225 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~---g--~~~~ad~VV~a~p~~~-~~~l~ 225 (355)
+.+.|.+.+++. |+++++|++|+.++++ |+ |++ + | ++++||.||.|...+. ..+.+
T Consensus 140 l~~~L~~~a~~~---v~~~~~v~~~~~~~~~--v~-v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~l 202 (549)
T 2r0c_A 140 LAPLLAEAVGER---LRTRSRLDSFEQRDDH--VR-ATITDLRTGATRAVHARYLVACDGASSPTRKAL 202 (549)
T ss_dssp HHHHHHHHHGGG---EECSEEEEEEEECSSC--EE-EEEEETTTCCEEEEEEEEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHh---cccCcEEEEEEEeCCE--EE-EEEEECCCCCEEEEEeCEEEECCCCCcHHHHHc
Confidence 445666666655 9999999999998753 53 443 3 5 4799999999999875 45555
No 192
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=85.99 E-value=2.2 Score=37.00 Aligned_cols=49 Identities=14% Similarity=0.112 Sum_probs=35.6
Q ss_pred HHHHHHH-HcCcEEEcCceeeEEEecCCCCeEEEEEe----CCe--EEecCEEEEccCh
Q 018455 167 PWMDSMR-TRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGI 218 (355)
Q Consensus 167 ~l~~~l~-~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~--~~~ad~VV~a~p~ 218 (355)
.+.+.+. +.|++|+++++|++|..++ ++.+|.+ +|+ +++||.||+|++.
T Consensus 192 ~~~~~l~~~~gv~i~~~~~v~~i~~~~---~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 247 (325)
T 2q7v_A 192 VAQARAFANPKMKFIWDTAVEEIQGAD---SVSGVKLRNLKTGEVSELATDGVFIFIGH 247 (325)
T ss_dssp HHHHHHHTCTTEEEECSEEEEEEEESS---SEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHHhcCCceEecCCceEEEccCC---cEEEEEEEECCCCcEEEEEcCEEEEccCC
Confidence 3444554 4699999999999998642 2445554 454 7899999999864
No 193
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=85.65 E-value=1.3 Score=40.49 Aligned_cols=50 Identities=8% Similarity=-0.049 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-C--CeEEecCEEEEccCh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G--KETYSAGAVVLAVGI 218 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~--g~~~~ad~VV~a~p~ 218 (355)
..+.+.+.++++|+++++|+.|++|+ + +++ .+.. + +++++||.||++++.
T Consensus 202 ~~~~l~~~l~~~GV~~~~~~~v~~v~--~--~~~-~~~~~~g~~~~i~~d~vi~~~G~ 254 (430)
T 3hyw_A 202 SKRLVEDLFAERNIDWIANVAVKAIE--P--DKV-IYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEEC--S--SEE-EEECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHHhCCeEEEeCceEEEEe--C--Cce-EEEeeCCCceEeecceEEEeccC
Confidence 44557777889999999999999986 3 224 2333 3 358999999998864
No 194
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=85.38 E-value=2.1 Score=41.46 Aligned_cols=62 Identities=26% Similarity=0.282 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHcCc--EEEcCceeeEEEecCC--CCeEEEEEe-------CC--eEEecCEEEEccChhh-HHHhhh
Q 018455 164 IFEPWMDSMRTRGC--EFLDGRRVTDFIYDEE--RCCISDVVC-------GK--ETYSAGAVVLAVGIST-LQELIK 226 (355)
Q Consensus 164 l~~~l~~~l~~~G~--~i~l~~~V~~I~~~~~--~~~v~~v~~-------~g--~~~~ad~VV~a~p~~~-~~~l~~ 226 (355)
+.+.|.+.+++.|+ +|+++++|++|+++++ +..| .|++ +| ++++||.||.|...+. ..+.+.
T Consensus 143 l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v-~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 218 (639)
T 2dkh_A 143 VHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPV-TVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIG 218 (639)
T ss_dssp HHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCE-EEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCE-EEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhC
Confidence 66778888888887 9999999999998763 1124 3443 35 5799999999999875 455553
No 195
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=85.06 E-value=1.4 Score=37.58 Aligned_cols=60 Identities=12% Similarity=0.134 Sum_probs=42.4
Q ss_pred ceEEecCCcchHHHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 152 DLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 152 ~~~~~~gg~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
.+.+...+... +.+.+.+.+++.|++|+. ++|.+|..+ + .|.+ +|+++++|.||++++..
T Consensus 165 ~v~~v~~~~~~-~~~~~~~~l~~~gv~i~~-~~v~~i~~~---~---~v~~~~g~~~~~D~vi~a~G~~ 225 (297)
T 3fbs_A 165 ETTFFTNGIVE-PDADQHALLAARGVRVET-TRIREIAGH---A---DVVLADGRSIALAGLFTQPKLR 225 (297)
T ss_dssp EEEEECTTTCC-CCHHHHHHHHHTTCEEEC-SCEEEEETT---E---EEEETTSCEEEESEEEECCEEE
T ss_pred cEEEEECCCCC-CCHHHHHHHHHCCcEEEc-ceeeeeecC---C---eEEeCCCCEEEEEEEEEccCcc
Confidence 44444433323 446677888899999985 999998742 1 3555 77899999999998653
No 196
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=84.93 E-value=2.5 Score=36.42 Aligned_cols=52 Identities=13% Similarity=0.218 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|.++++++ |..|..+++ .+ .|..+++++.+|.||+|+...
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~--~~-~v~~~~~~~~~~~lv~AtG~~ 115 (320)
T 1trb_A 64 LMERMHEHATKFETEIIFDH-INKVDLQNR--PF-RLNGDNGEYTCDALIIATGAS 115 (320)
T ss_dssp HHHHHHHHHHHTTCEEECCC-EEEEECSSS--SE-EEEESSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHCCCEEEEee-eeEEEecCC--EE-EEEeCCCEEEcCEEEECCCCC
Confidence 45566667778899999997 999987663 24 354477889999999998763
No 197
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=84.20 E-value=1.5 Score=41.80 Aligned_cols=53 Identities=15% Similarity=0.228 Sum_probs=40.0
Q ss_pred HHcCcEEEcCceeeEEEecCCCCeEEEEEe--C-Ce--EEec-CEEEEccChhhHHHhh
Q 018455 173 RTRGCEFLDGRRVTDFIYDEERCCISDVVC--G-KE--TYSA-GAVVLAVGISTLQELI 225 (355)
Q Consensus 173 ~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~-g~--~~~a-d~VV~a~p~~~~~~l~ 225 (355)
.+.+.+|++++.|++|..+++++++++|.. . |+ ++.| +.||+|+.+-...+|+
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL 275 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLL 275 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHH
T ss_pred cCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHH
Confidence 345799999999999999843367889876 3 54 5677 4699999887665554
No 198
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=84.18 E-value=1.6 Score=41.77 Aligned_cols=54 Identities=17% Similarity=0.207 Sum_probs=41.0
Q ss_pred HHcCcEEEcCceeeEEEecCC--CCeEEEEEe---CCe--EEecC-EEEEccChhhHHHhhh
Q 018455 173 RTRGCEFLDGRRVTDFIYDEE--RCCISDVVC---GKE--TYSAG-AVVLAVGISTLQELIK 226 (355)
Q Consensus 173 ~~~G~~i~l~~~V~~I~~~~~--~~~v~~v~~---~g~--~~~ad-~VV~a~p~~~~~~l~~ 226 (355)
.+.+.+|++++.|++|..+++ +++++||.. +|+ ++.|+ .||+++.+-...+|+.
T Consensus 238 ~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~ 299 (583)
T 3qvp_A 238 QRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILE 299 (583)
T ss_dssp TCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHH
T ss_pred cCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHH
Confidence 456899999999999999831 267889975 353 57786 5999998877766653
No 199
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=84.03 E-value=1.4 Score=42.16 Aligned_cols=54 Identities=19% Similarity=0.205 Sum_probs=40.6
Q ss_pred HHcCcEEEcCceeeEEEecCCC--CeEEEEEe---CCe--EEec-CEEEEccChhhHHHhhh
Q 018455 173 RTRGCEFLDGRRVTDFIYDEER--CCISDVVC---GKE--TYSA-GAVVLAVGISTLQELIK 226 (355)
Q Consensus 173 ~~~G~~i~l~~~V~~I~~~~~~--~~v~~v~~---~g~--~~~a-d~VV~a~p~~~~~~l~~ 226 (355)
++.+.+|++++.|++|..++++ +++++|.. +|+ ++.| +.||+|+..-...+|+-
T Consensus 242 ~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~ 303 (587)
T 1gpe_A 242 QRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILE 303 (587)
T ss_dssp TCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHH
T ss_pred cCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHH
Confidence 3568999999999999987531 36888864 464 5778 88999999866655543
No 200
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=83.95 E-value=1.7 Score=38.47 Aligned_cols=53 Identities=11% Similarity=0.133 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHcC-cEEEcCceeeEEEecCCCCeEEEEEe-CCeEEe-cCEEEEccChh
Q 018455 164 IFEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC-GKETYS-AGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G-~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~-ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.| ++|+++++|.+|..+++ .+ .|.+ +|+++. +|.||+|+...
T Consensus 216 ~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~--~~-~v~~~~g~~~~~~d~vi~a~G~~ 271 (369)
T 3d1c_A 216 TRQRLGNVIKQGARIEMNVHYTVKDIDFNNG--QY-HISFDSGQSVHTPHEPILATGFD 271 (369)
T ss_dssp HHHHHHHHHHTTCCEEEECSCCEEEEEEETT--EE-EEEESSSCCEEESSCCEECCCBC
T ss_pred HHHHHHHHHhhCCcEEEecCcEEEEEEecCC--ce-EEEecCCeEeccCCceEEeeccC
Confidence 3456777777786 99999999999986553 23 4655 676665 69999998753
No 201
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=83.51 E-value=0.54 Score=37.46 Aligned_cols=44 Identities=16% Similarity=0.080 Sum_probs=29.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhhc-ccCCCc-ee--eeeeEEecCCCc
Q 018455 303 ANELMPLKDDQVVAKAVSYLSKCI-KDFSTA-TV--MDHKIRRFPKSL 346 (355)
Q Consensus 303 ~~~~~~~~~ee~~~~~~~~l~~~~-p~~~~~-~~--~~~~v~~~~~a~ 346 (355)
+..+..++++++++.++++|+++| |.+... .. ..+.|.+.|++.
T Consensus 48 A~~~~~l~~~e~~~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~ 95 (181)
T 2e1m_C 48 AARWDSFDDAERYGYALENLQSVHGRRIEVFYTGAGQTQSWLRDPYAC 95 (181)
T ss_dssp HHHHTTSCTTTTHHHHHHHHHHHHCGGGGGTEEEEEEEEESSSCTTTS
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHhCCCcHhhccCcceecccCCCCCCC
Confidence 445667899999999999999999 554211 12 334455555544
No 202
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=82.40 E-value=3.3 Score=35.81 Aligned_cols=53 Identities=21% Similarity=0.152 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEec--CCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYD--EERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~--~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++++. ++|.+|..+ ++ + .+.|.+ +|+++.+|.||+|+...
T Consensus 67 ~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~-~-~~~v~~~~g~~~~~~~vv~AtG~~ 122 (325)
T 2q7v_A 67 LAQRMHQQAEKFGAKVEM-DEVQGVQHDATSH-P-YPFTVRGYNGEYRAKAVILATGAD 122 (325)
T ss_dssp HHHHHHHHHHHTTCEEEE-CCEEEEEECTTSS-S-CCEEEEESSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHcCCEEEe-eeEEEEEeccCCC-c-eEEEEECCCCEEEeCEEEECcCCC
Confidence 556677777788999987 689999887 42 1 123444 77889999999999864
No 203
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=82.15 E-value=3 Score=36.33 Aligned_cols=51 Identities=20% Similarity=0.236 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEE-Ee-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDV-VC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v-~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|+++++++ |.+|.. ++ .+ .| .+ +|+++.+|.||+|+...
T Consensus 73 ~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~--~~-~v~~~~~g~~~~~d~lviAtG~~ 125 (335)
T 2a87_A 73 LMDEMREQALRFGADLRMED-VESVSL-HG--PL-KSVVTADGQTHRARAVILAMGAA 125 (335)
T ss_dssp HHHHHHHHHHHTTCEEECCC-EEEEEC-SS--SS-EEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHcCCEEEEee-EEEEEe-CC--cE-EEEEeCCCCEEEeCEEEECCCCC
Confidence 45566667777899999998 999987 32 23 45 55 56789999999998753
No 204
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=81.96 E-value=2.7 Score=35.65 Aligned_cols=52 Identities=23% Similarity=0.231 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHc-CcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~-G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++. +.++. +++|++|..++++ +.|.+ +|+++.+|.||+|+...
T Consensus 58 ~~~~~~~~~~~~~~v~~~-~~~v~~i~~~~~~---~~v~~~~g~~~~~d~vviAtG~~ 111 (297)
T 3fbs_A 58 IIAEARRQIERYPTIHWV-EGRVTDAKGSFGE---FIVEIDGGRRETAGRLILAMGVT 111 (297)
T ss_dssp HHHHHHHHHTTCTTEEEE-ESCEEEEEEETTE---EEEEETTSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHhcCCeEEE-EeEEEEEEEcCCe---EEEEECCCCEEEcCEEEECCCCC
Confidence 455666667665 45654 5699999987642 35766 57789999999999864
No 205
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=81.36 E-value=1.5 Score=41.72 Aligned_cols=55 Identities=20% Similarity=0.136 Sum_probs=40.2
Q ss_pred HHHcCcEEEcCceeeEEEec---CCCCeEEEEEe---CC-e--EEec-CEEEEccChhhHHHhhh
Q 018455 172 MRTRGCEFLDGRRVTDFIYD---EERCCISDVVC---GK-E--TYSA-GAVVLAVGISTLQELIK 226 (355)
Q Consensus 172 l~~~G~~i~l~~~V~~I~~~---~~~~~v~~v~~---~g-~--~~~a-d~VV~a~p~~~~~~l~~ 226 (355)
+.+.+.+|++++.|++|..+ ++.++++||.. +| + ++.| +.||++..+-...+|+.
T Consensus 218 ~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~ 282 (566)
T 3fim_B 218 QSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQ 282 (566)
T ss_dssp TTCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHH
T ss_pred ccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHH
Confidence 34568999999999999997 22146888876 24 3 5678 57999998876666653
No 206
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=81.26 E-value=2.8 Score=40.79 Aligned_cols=49 Identities=16% Similarity=0.279 Sum_probs=37.3
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCC--eEEecCEEEEccChh
Q 018455 166 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGK--ETYSAGAVVLAVGIS 219 (355)
Q Consensus 166 ~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g--~~~~ad~VV~a~p~~ 219 (355)
..+.+.+++.|++|+++++|++|. ++ + + .+..+| ++++||.||+|+...
T Consensus 577 ~~~~~~l~~~GV~v~~~~~v~~i~--~~-~-v-~~~~~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 577 WIHRTTLLSRGVKMIPGVSYQKID--DD-G-L-HVVINGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEEE--TT-E-E-EEEETTEEEEECCSEEEECCCEE
T ss_pred HHHHHHHHhcCCEEEeCcEEEEEe--CC-e-E-EEecCCeEEEEeCCEEEECCCcc
Confidence 345677888999999999999997 32 2 3 233566 579999999999764
No 207
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=81.01 E-value=2.5 Score=38.60 Aligned_cols=45 Identities=24% Similarity=0.327 Sum_probs=35.3
Q ss_pred HHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 170 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 170 ~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+++.|++++++++|+.|..++ . .|.+ +|+++.+|.||+|+...
T Consensus 68 ~~~~~~gv~~~~~~~v~~i~~~~--~---~v~~~~g~~~~~d~lviAtG~~ 113 (431)
T 1q1r_A 68 DAYAAQNIQLLGGTQVTAINRDR--Q---QVILSDGRALDYDRLVLATGGR 113 (431)
T ss_dssp HHHHHTTEEEECSCCEEEEETTT--T---EEEETTSCEEECSEEEECCCEE
T ss_pred HHHHhCCCEEEeCCEEEEEECCC--C---EEEECCCCEEECCEEEEcCCCC
Confidence 34567899999999999998754 2 3555 57789999999999753
No 208
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=80.70 E-value=2.5 Score=37.67 Aligned_cols=43 Identities=23% Similarity=0.182 Sum_probs=34.0
Q ss_pred HHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccCh
Q 018455 171 SMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGI 218 (355)
Q Consensus 171 ~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~ 218 (355)
.+++.|++++++++|+.|..++ .. |..+|+++.+|++|+||..
T Consensus 69 ~~~~~~v~~~~g~~v~~id~~~--~~---V~~~g~~~~~d~lViATGs 111 (367)
T 1xhc_A 69 WYRKRGIEIRLAEEAKLIDRGR--KV---VITEKGEVPYDTLVLATGA 111 (367)
T ss_dssp HHHHHTEEEECSCCEEEEETTT--TE---EEESSCEEECSEEEECCCE
T ss_pred HHHhCCcEEEECCEEEEEECCC--CE---EEECCcEEECCEEEECCCC
Confidence 3456799999999999998654 22 3367788999999999875
No 209
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=80.65 E-value=4.8 Score=37.72 Aligned_cols=54 Identities=20% Similarity=0.180 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCC--CeEEEEEe---CC-e--EEecCEEEEccCh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEER--CCISDVVC---GK-E--TYSAGAVVLAVGI 218 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~--~~v~~v~~---~g-~--~~~ad~VV~a~p~ 218 (355)
+.+.+.+.+++.|++|++++.|++|...+++ +.+ .|+. +| + ++++|.||+|+..
T Consensus 252 ~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~-~v~~~~~~g~~~~~~~~D~vi~a~G~ 313 (519)
T 3qfa_A 252 MANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRL-RVVAQSTNSEEIIEGEYNTVMLAIGR 313 (519)
T ss_dssp HHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEE-EEEEEESSSSCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceE-EEEEEECCCcEEEEEECCEEEEecCC
Confidence 6677778888999999999999888764321 223 2332 44 2 5689999999875
No 210
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=80.37 E-value=3 Score=39.22 Aligned_cols=50 Identities=10% Similarity=0.259 Sum_probs=37.3
Q ss_pred HHHHHHHH-cCcEEEcCceeeEEEecCCCCeEEEEEe----CCe--EEecCEEEEccCh
Q 018455 167 PWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGI 218 (355)
Q Consensus 167 ~l~~~l~~-~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~--~~~ad~VV~a~p~ 218 (355)
.+.+.+++ .|++|++++.|++|..++ +++.+|.+ +|+ ++.+|.||++++.
T Consensus 395 ~l~~~l~~~~gV~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 451 (521)
T 1hyu_A 395 VLQDKVRSLKNVDIILNAQTTEVKGDG--SKVVGLEYRDRVSGDIHSVALAGIFVQIGL 451 (521)
T ss_dssp HHHHHHTTCTTEEEECSEEEEEEEECS--SSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHhcCCCcEEEeCCEEEEEEcCC--CcEEEEEEEeCCCCceEEEEcCEEEECcCC
Confidence 35566666 589999999999998765 34656654 243 6899999999874
No 211
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=80.30 E-value=2.6 Score=39.83 Aligned_cols=55 Identities=15% Similarity=0.187 Sum_probs=40.9
Q ss_pred HHHcCcEEEcCceeeEEEecCC-CCeEEEEEe---CCe--EE---ecCEEEEccChhhHHHhhh
Q 018455 172 MRTRGCEFLDGRRVTDFIYDEE-RCCISDVVC---GKE--TY---SAGAVVLAVGISTLQELIK 226 (355)
Q Consensus 172 l~~~G~~i~l~~~V~~I~~~~~-~~~v~~v~~---~g~--~~---~ad~VV~a~p~~~~~~l~~ 226 (355)
+++.|.+|++++.|++|..+++ ++++++|.+ +|+ ++ .++.||+|+.+....+|+.
T Consensus 204 ~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~ 267 (536)
T 1ju2_A 204 GNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLL 267 (536)
T ss_dssp SCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHH
T ss_pred hcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHH
Confidence 4567899999999999999763 136888876 354 34 4689999999876666543
No 212
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=79.36 E-value=3.7 Score=37.92 Aligned_cols=44 Identities=14% Similarity=0.126 Sum_probs=32.5
Q ss_pred cCcEEEcCceeeEEEecCCCC-eEEEEEe----------------CC--eEEecCEEEEccChh
Q 018455 175 RGCEFLDGRRVTDFIYDEERC-CISDVVC----------------GK--ETYSAGAVVLAVGIS 219 (355)
Q Consensus 175 ~G~~i~l~~~V~~I~~~~~~~-~v~~v~~----------------~g--~~~~ad~VV~a~p~~ 219 (355)
.|++|++++.+.+|..+++ + ++.+|++ +| ++++||.||.++...
T Consensus 270 ~gv~~~~~~~~~~i~~~~~-~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~ 332 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPD-GRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYK 332 (460)
T ss_dssp EEEEEECSEEEEEEEECTT-SSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEE
T ss_pred ceEEEECCCChheEEcCCC-CceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCC
Confidence 7899999999999986532 2 4545543 23 478999999998753
No 213
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=78.40 E-value=2.6 Score=36.75 Aligned_cols=45 Identities=18% Similarity=0.212 Sum_probs=33.5
Q ss_pred HHHcCcEEEcCceeeEEEecCCCCeEEEEEe----CC--eEEecCEEEEccChh
Q 018455 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGIS 219 (355)
Q Consensus 172 l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g--~~~~ad~VV~a~p~~ 219 (355)
+++.|++|+++++|.+|..++ + +.+|.+ +| ++++||.||+|++..
T Consensus 201 ~~~~gV~v~~~~~v~~i~~~~--~-~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2a87_A 201 RNNDKIRFLTNHTVVAVDGDT--T-VTGLRVRDTNTGAETTLPVTGVFVAIGHE 251 (335)
T ss_dssp HHCTTEEEECSEEEEEEECSS--S-CCEEEEEEETTSCCEEECCSCEEECSCEE
T ss_pred hccCCcEEEeCceeEEEecCC--c-EeEEEEEEcCCCceEEeecCEEEEccCCc
Confidence 456899999999999998654 2 223433 34 578999999998753
No 214
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=77.12 E-value=3.4 Score=37.38 Aligned_cols=42 Identities=26% Similarity=0.298 Sum_probs=34.0
Q ss_pred HHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccCh
Q 018455 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 218 (355)
Q Consensus 172 l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~ 218 (355)
+++.|.+++++++|+.|..++ . .|.+ +|+++.+|++|+|+..
T Consensus 67 ~~~~~i~~~~~~~v~~id~~~--~---~v~~~~g~~~~~d~lvlAtG~ 109 (410)
T 3ef6_A 67 YGEARIDMLTGPEVTALDVQT--R---TISLDDGTTLSADAIVIATGS 109 (410)
T ss_dssp HHHTTCEEEESCCEEEEETTT--T---EEEETTSCEEECSEEEECCCE
T ss_pred HHHCCCEEEeCCEEEEEECCC--C---EEEECCCCEEECCEEEEccCC
Confidence 456799999999999998765 2 3555 6789999999999874
No 215
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=76.45 E-value=3.7 Score=41.86 Aligned_cols=49 Identities=22% Similarity=0.323 Sum_probs=37.0
Q ss_pred HHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-C-------C--eEEecCEEEEccCh
Q 018455 169 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G-------K--ETYSAGAVVLAVGI 218 (355)
Q Consensus 169 ~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~-------g--~~~~ad~VV~a~p~ 218 (355)
.+.+++.|++|++++.|.+|..+++ +++.+|++ + | ++++||.||+++..
T Consensus 323 ~~~l~~~GV~v~~~~~v~~i~~~~~-~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~ 381 (965)
T 2gag_A 323 AAQAVADGVQVISGSVVVDTEADEN-GELSAIVVAELDEARELGGTQRFEADVLAVAGGF 381 (965)
T ss_dssp HHHHHHTTCCEEETEEEEEEEECTT-SCEEEEEEEEECTTCCEEEEEEEECSEEEEECCE
T ss_pred HHHHHhCCeEEEeCCEeEEEeccCC-CCEEEEEEEeccccCCCCceEEEEcCEEEECCCc
Confidence 4567889999999999999987412 33555554 2 4 57899999999874
No 216
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=75.86 E-value=5 Score=37.43 Aligned_cols=55 Identities=15% Similarity=0.012 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCC-----eEEEEEe-C---C--eEEecCEEEEccCh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERC-----CISDVVC-G---K--ETYSAGAVVLAVGI 218 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~-----~v~~v~~-~---g--~~~~ad~VV~a~p~ 218 (355)
+.+-+...+++.+..|+++++|++|+..++++ ..+.|++ + | +++.|++||+|++.
T Consensus 147 ~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 147 FEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 44555555555667899999999999754311 1455655 2 2 46899999999983
No 217
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=75.73 E-value=8.2 Score=36.83 Aligned_cols=55 Identities=18% Similarity=0.152 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEec------C-CCCeEEEEE--e-CCeEEe--cCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYD------E-ERCCISDVV--C-GKETYS--AGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~------~-~~~~v~~v~--~-~g~~~~--ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++|++++.|++|... + +.+++ .+. . +|++++ +|.||+|+...
T Consensus 328 ~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~~~D~vi~a~G~~ 394 (598)
T 2x8g_A 328 MAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLL-LVKGHYTDGKKFEEEFETVIFAVGRE 394 (598)
T ss_dssp HHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEE-EEEEEETTSCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceE-EEEEEeCCCcEEeccCCEEEEEeCCc
Confidence 5566777788899999999999888642 1 11223 232 2 566554 99999998753
No 218
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=75.22 E-value=6 Score=33.87 Aligned_cols=52 Identities=17% Similarity=0.172 Sum_probs=34.4
Q ss_pred HHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccCh
Q 018455 165 FEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 218 (355)
Q Consensus 165 ~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~ 218 (355)
.+...+.+.+.+.....+..|..+...++ +.. .|.+ +|+++++|+||+||..
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~v~~~~g~~~~a~~liiATGs 115 (304)
T 4fk1_A 63 KEIGLNEVMKYPSVHYYEKTVVMITKQST-GLF-EIVTKDHTKYLAERVLLATGM 115 (304)
T ss_dssp HHHHHHHHTTSTTEEEEECCEEEEEECTT-SCE-EEEETTCCEEEEEEEEECCCC
T ss_pred HHHHHHHHHhcCCEEEEeeEEEEeeecCC-CcE-EEEECCCCEEEeCEEEEccCC
Confidence 34444455555655566667777776654 323 4555 7889999999999975
No 219
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=75.06 E-value=5.6 Score=35.49 Aligned_cols=44 Identities=23% Similarity=0.186 Sum_probs=34.6
Q ss_pred HHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChh
Q 018455 171 SMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (355)
Q Consensus 171 ~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~ 219 (355)
.+++.|++++++++|+.|..++ . .|.++++++.+|.+|+|+...
T Consensus 69 ~~~~~~v~~~~~~~v~~i~~~~--~---~v~~~~~~~~~d~lviAtG~~ 112 (384)
T 2v3a_A 69 MAEQLNARILTHTRVTGIDPGH--Q---RIWIGEEEVRYRDLVLAWGAE 112 (384)
T ss_dssp HHHHTTCEEECSCCCCEEEGGG--T---EEEETTEEEECSEEEECCCEE
T ss_pred HHHhCCcEEEeCCEEEEEECCC--C---EEEECCcEEECCEEEEeCCCC
Confidence 3466799999999999998754 2 355667789999999998753
No 220
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=74.55 E-value=4.1 Score=34.91 Aligned_cols=50 Identities=6% Similarity=0.084 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEcc
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAV 216 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~ 216 (355)
+.+.+.+.+++.|..++.++ |..|..++ +++..|.+ +|+++++|.||+++
T Consensus 182 ~~~~~~~~l~~~g~~~~~~~-v~~~~~~~--~~~~~v~~~~g~~i~~~~~vi~~ 232 (304)
T 4fk1_A 182 LSQTIMDELSNKNIPVITES-IRTLQGEG--GYLKKVEFHSGLRIERAGGFIVP 232 (304)
T ss_dssp CCHHHHHHHHTTTCCEECSC-EEEEESGG--GCCCEEEETTSCEECCCEEEECC
T ss_pred chhhhhhhhhccceeEeeee-EEEeecCC--Ceeeeeeccccceeeecceeeee
Confidence 34567777888899998765 77787665 45667877 67889999888765
No 221
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=74.34 E-value=4.1 Score=37.52 Aligned_cols=51 Identities=18% Similarity=0.157 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe---CCe--EEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~---~g~--~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+ .++|+++++|++|..+++ +.+ .|.+ +|+ +++||.||+|++..
T Consensus 216 ~~~~l~~~l---~v~i~~~~~v~~i~~~~~-~~v-~v~~~~~~G~~~~i~~D~vi~a~G~~ 271 (466)
T 3l8k_A 216 IVNTLLSIL---KLNIKFNSPVTEVKKIKD-DEY-EVIYSTKDGSKKSIFTNSVVLAAGRR 271 (466)
T ss_dssp HHHHHHHHH---CCCEECSCCEEEEEEEET-TEE-EEEECCTTSCCEEEEESCEEECCCEE
T ss_pred HHHHHHhcC---EEEEEECCEEEEEEEcCC-CcE-EEEEEecCCceEEEEcCEEEECcCCC
Confidence 344444444 399999999999998652 224 3554 354 79999999999753
No 222
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=73.39 E-value=6.2 Score=36.86 Aligned_cols=51 Identities=18% Similarity=0.249 Sum_probs=40.1
Q ss_pred HcCcEEEcCceeeEEEecCCCCeEEEEEe--CC--eEEecCEEEEccChhhHHHhhh
Q 018455 174 TRGCEFLDGRRVTDFIYDEERCCISDVVC--GK--ETYSAGAVVLAVGISTLQELIK 226 (355)
Q Consensus 174 ~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~g--~~~~ad~VV~a~p~~~~~~l~~ 226 (355)
+.+..|.+++.|++|..++ +++++|.. ++ .++.|+.||++..+-...+||-
T Consensus 223 r~nl~v~~~~~v~~i~~~~--~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LLl 277 (526)
T 3t37_A 223 RKNLTILTGSRVRRLKLEG--NQVRSLEVVGRQGSAEVFADQIVLCAGALESPALLM 277 (526)
T ss_dssp CTTEEEECSCEEEEEEEET--TEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred CCCeEEEeCCEEEEEEecC--CeEEEEEEEecCceEEEeecceEEcccccCCcchhh
Confidence 3468999999999999987 56888865 33 3678999999998877666653
No 223
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=73.08 E-value=3.1 Score=40.94 Aligned_cols=49 Identities=12% Similarity=0.096 Sum_probs=35.3
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe---CC-eE------------------EecCEEEEccChh
Q 018455 166 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK-ET------------------YSAGAVVLAVGIS 219 (355)
Q Consensus 166 ~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~---~g-~~------------------~~ad~VV~a~p~~ 219 (355)
..+.+.+++.|++|++++.|.+|..+ + + .+.. ++ ++ +.||.||+|+...
T Consensus 575 ~~~~~~l~~~GV~i~~~~~v~~i~~~---~-v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~ 645 (729)
T 1o94_A 575 PNMMRRLHELHVEELGDHFCSRIEPG---R-M-EIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRH 645 (729)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEETT---E-E-EEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEE
T ss_pred HHHHHHHHhCCCEEEcCcEEEEEECC---e-E-EEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCC
Confidence 34666778899999999999999732 1 3 2332 33 33 8999999999853
No 224
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=72.40 E-value=10 Score=38.87 Aligned_cols=47 Identities=23% Similarity=0.229 Sum_probs=35.5
Q ss_pred HHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-------C-------C--eEEecCEEEEccCh
Q 018455 170 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-------G-------K--ETYSAGAVVLAVGI 218 (355)
Q Consensus 170 ~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-------~-------g--~~~~ad~VV~a~p~ 218 (355)
+.+++.|+++++++.+.+|..++ +++.+|.+ + | .+++||.||+|+..
T Consensus 378 ~~~~~~Gv~~~~~~~~~~i~~~~--g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~ 440 (1025)
T 1gte_A 378 ELAKEEKCEFLPFLSPRKVIVKG--GRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGS 440 (1025)
T ss_dssp HHHHHTTCEEECSEEEEEEEEET--TEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHcCCEEEeCCCceEEEccC--CeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCC
Confidence 55677899999999999998754 45655543 1 2 36899999999864
No 225
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=72.26 E-value=5.2 Score=34.12 Aligned_cols=51 Identities=22% Similarity=0.254 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEE--EEeCCeEEecCEEEEccCh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISD--VVCGKETYSAGAVVLAVGI 218 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~--v~~~g~~~~ad~VV~a~p~ 218 (355)
+.+.+.+.+++.|.+++++ +|.+| .+++.+ .+. +.+++ ++.+|.||+|+..
T Consensus 64 ~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~-~~~v~~~~~~-~~~~d~lvlAtG~ 116 (315)
T 3r9u_A 64 FMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDG-SFTIKLEGGK-TELAKAVIVCTGS 116 (315)
T ss_dssp HHHHHHHHHTTTCCEEECC-CEEEE-EECTTS-CEEEEETTSC-EEEEEEEEECCCE
T ss_pred HHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCC-cEEEEEecCC-EEEeCEEEEeeCC
Confidence 5566777777889999998 89999 554101 134 33356 8999999999976
No 226
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=72.05 E-value=4.5 Score=36.57 Aligned_cols=44 Identities=16% Similarity=0.122 Sum_probs=34.9
Q ss_pred HHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccCh
Q 018455 170 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 218 (355)
Q Consensus 170 ~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~ 218 (355)
+.+++.|.+++++++|+.|..++ . .|.+ +|+++.+|++|+|+..
T Consensus 73 ~~~~~~~i~~~~~~~v~~id~~~--~---~v~~~~g~~~~~d~lvlAtG~ 117 (415)
T 3lxd_A 73 QFWEDKAVEMKLGAEVVSLDPAA--H---TVKLGDGSAIEYGKLIWATGG 117 (415)
T ss_dssp HHHHHTTEEEEETCCEEEEETTT--T---EEEETTSCEEEEEEEEECCCE
T ss_pred HHHHHCCcEEEeCCEEEEEECCC--C---EEEECCCCEEEeeEEEEccCC
Confidence 44567899999999999998765 2 3555 6789999999999863
No 227
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=71.87 E-value=3.1 Score=37.65 Aligned_cols=42 Identities=29% Similarity=0.345 Sum_probs=33.4
Q ss_pred HHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 173 RTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 173 ~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
++.|++++++++|+.|..++ . .|.+ +|+++.+|.+|+|+...
T Consensus 70 ~~~~v~~~~~~~v~~i~~~~--~---~v~~~~g~~~~~d~lviAtG~~ 112 (408)
T 2gqw_A 70 RAPEVEWLLGVTAQSFDPQA--H---TVALSDGRTLPYGTLVLATGAA 112 (408)
T ss_dssp TSCSCEEEETCCEEEEETTT--T---EEEETTSCEEECSEEEECCCEE
T ss_pred HHCCCEEEcCCEEEEEECCC--C---EEEECCCCEEECCEEEECCCCC
Confidence 45689999999999998754 2 3555 67789999999999753
No 228
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=70.21 E-value=5.1 Score=36.47 Aligned_cols=42 Identities=17% Similarity=0.211 Sum_probs=32.6
Q ss_pred HHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 172 l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+++.|++++.+ +|++|..++ . .|++ +|+++.+|.+|+|+.+.
T Consensus 66 ~~~~gv~~i~~-~v~~Id~~~--~---~V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 66 LPKFNIEFINE-KAESIDPDA--N---TVTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp GGGGTEEEECS-CEEEEETTT--T---EEEETTCCEEECSEEEECCCCE
T ss_pred HHHCCcEEEEe-EEEEEECCC--C---EEEECCCCEEECCEEEEeCCCC
Confidence 45678898766 799998765 2 3556 67899999999999864
No 229
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=69.06 E-value=7.6 Score=36.01 Aligned_cols=46 Identities=13% Similarity=0.244 Sum_probs=34.3
Q ss_pred HHHHcCcEEEcCceeeEEEecCCCCeEEEEEeC--CeEEecCEEEEccChh
Q 018455 171 SMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG--KETYSAGAVVLAVGIS 219 (355)
Q Consensus 171 ~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~--g~~~~ad~VV~a~p~~ 219 (355)
.+++.|++++++++|..|..++ +.+ .+..+ ++++.+|.+|+|+...
T Consensus 101 ~~~~~gv~v~~~~~v~~i~~~~--~~v-~v~~~g~~~~~~~d~lviAtG~~ 148 (490)
T 2bc0_A 101 ELESLGAKVYMESPVQSIDYDA--KTV-TALVDGKNHVETYDKLIFATGSQ 148 (490)
T ss_dssp HHHHTTCEEETTCCEEEEETTT--TEE-EEEETTEEEEEECSEEEECCCEE
T ss_pred HHHhCCCEEEeCCEEEEEECCC--CEE-EEEeCCcEEEEECCEEEECCCCC
Confidence 3456799999999999998765 334 34423 3579999999999753
No 230
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=68.80 E-value=7.8 Score=35.45 Aligned_cols=46 Identities=22% Similarity=0.296 Sum_probs=35.2
Q ss_pred HHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe--CCeEEecCEEEEccCh
Q 018455 170 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKETYSAGAVVLAVGI 218 (355)
Q Consensus 170 ~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~g~~~~ad~VV~a~p~ 218 (355)
+.+++.|.+++++++|++|..++ +.+ .+.. +++++.+|.+|+|+..
T Consensus 66 ~~~~~~gi~~~~~~~V~~id~~~--~~v-~v~~~~~~~~~~~d~lviAtG~ 113 (452)
T 3oc4_A 66 EELRRQKIQLLLNREVVAMDVEN--QLI-AWTRKEEQQWYSYDKLILATGA 113 (452)
T ss_dssp HHHHHTTEEEECSCEEEEEETTT--TEE-EEEETTEEEEEECSEEEECCCC
T ss_pred HHHHHCCCEEEECCEEEEEECCC--CEE-EEEecCceEEEEcCEEEECCCc
Confidence 44567899999999999999876 334 3432 4568999999999875
No 231
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=67.59 E-value=11 Score=34.26 Aligned_cols=47 Identities=17% Similarity=0.272 Sum_probs=34.3
Q ss_pred HHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe--CCe--EEecCEEEEccChh
Q 018455 170 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGIS 219 (355)
Q Consensus 170 ~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~g~--~~~ad~VV~a~p~~ 219 (355)
+.+++.|+++++++.|..|..++ +.+ .+.. +|+ ++.+|++|+|+...
T Consensus 64 ~~~~~~gv~~~~~~~v~~i~~~~--~~v-~~~~~~~g~~~~~~~d~lviAtG~~ 114 (447)
T 1nhp_A 64 EKMESRGVNVFSNTEITAIQPKE--HQV-TVKDLVSGEERVENYDKLIISPGAV 114 (447)
T ss_dssp HHHHHTTCEEEETEEEEEEETTT--TEE-EEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHCCCEEEECCEEEEEeCCC--CEE-EEEecCCCceEEEeCCEEEEcCCCC
Confidence 34456799999999999998765 334 3443 354 48999999998753
No 232
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=67.48 E-value=12 Score=35.61 Aligned_cols=48 Identities=13% Similarity=0.042 Sum_probs=35.7
Q ss_pred HHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe--CCe--EEecCEEEEccCh
Q 018455 168 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGI 218 (355)
Q Consensus 168 l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~g~--~~~ad~VV~a~p~ 218 (355)
+....++.|.+++++++|++|..++ +.+ .+.. +|+ ++.+|.+|+|+..
T Consensus 99 ~~~~~~~~gi~v~~~~~V~~id~~~--~~v-~v~~~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 99 VERMSKRFNLDIRVLSEVVKINKEE--KTI-TIKNVTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp HHHHHHHTTCEEECSEEEEEEETTT--TEE-EEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHhcCcEEEECCEEEEEECCC--CEE-EEeecCCCCEEEEeCCEEEECCCC
Confidence 3344566799999999999999876 334 3543 455 7899999999875
No 233
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=66.08 E-value=6.7 Score=36.07 Aligned_cols=42 Identities=21% Similarity=0.116 Sum_probs=30.6
Q ss_pred cCcEEEcCceeeEEEecCCCCeEEEEEe-----------------CC--eEEecCEEEEccChh
Q 018455 175 RGCEFLDGRRVTDFIYDEERCCISDVVC-----------------GK--ETYSAGAVVLAVGIS 219 (355)
Q Consensus 175 ~G~~i~l~~~V~~I~~~~~~~~v~~v~~-----------------~g--~~~~ad~VV~a~p~~ 219 (355)
.|++|++++.|.+|..++ ++.+|++ +| +++.||.||.|+...
T Consensus 265 ~gv~i~~~~~~~~i~~~~---~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~ 325 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGKR---KVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYR 325 (456)
T ss_dssp EEEEEECSEEEEEEECSS---SCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEE
T ss_pred ceEEEEeCCCCeEEecCC---cEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccc
Confidence 789999999999998542 2333432 23 468999999999753
No 234
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=65.95 E-value=5 Score=37.35 Aligned_cols=40 Identities=18% Similarity=0.228 Sum_probs=32.4
Q ss_pred HcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccCh
Q 018455 174 TRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 218 (355)
Q Consensus 174 ~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~ 218 (355)
+.|++++++++|.+|..++ . .|.+ +|+++.+|++|+||..
T Consensus 102 ~~gv~~~~g~~v~~id~~~--~---~V~~~~g~~i~yd~lviATGs 142 (493)
T 1m6i_A 102 NGGVAVLTGKKVVQLDVRD--N---MVKLNDGSQITYEKCLIATGG 142 (493)
T ss_dssp TCEEEEEETCCEEEEEGGG--T---EEEETTSCEEEEEEEEECCCE
T ss_pred cCCeEEEcCCEEEEEECCC--C---EEEECCCCEEECCEEEECCCC
Confidence 4688999999999998765 2 3555 6788999999999874
No 235
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=65.91 E-value=12 Score=34.27 Aligned_cols=46 Identities=15% Similarity=0.182 Sum_probs=34.3
Q ss_pred HHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe--C--CeEEecCEEEEccCh
Q 018455 170 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--G--KETYSAGAVVLAVGI 218 (355)
Q Consensus 170 ~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~--g~~~~ad~VV~a~p~ 218 (355)
+.+++.|++++++++|..|..++ +.+ .+.. + ++++++|.+|+|+..
T Consensus 66 ~~~~~~gv~~~~~~~v~~i~~~~--~~v-~v~~~~~g~~~~~~~d~lviAtGs 115 (452)
T 2cdu_A 66 EELSNLGANVQMRHQVTNVDPET--KTI-KVKDLITNEEKTEAYDKLIMTTGS 115 (452)
T ss_dssp HHHHHTTCEEEESEEEEEEEGGG--TEE-EEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHcCCEEEeCCEEEEEEcCC--CEE-EEEecCCCceEEEECCEEEEccCC
Confidence 33456799999999999998765 334 3443 2 467999999999974
No 236
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=65.75 E-value=4 Score=37.61 Aligned_cols=47 Identities=23% Similarity=0.264 Sum_probs=33.3
Q ss_pred HHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-------------------CC--eEEecCEEEEccChh
Q 018455 170 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-------------------GK--ETYSAGAVVLAVGIS 219 (355)
Q Consensus 170 ~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-------------------~g--~~~~ad~VV~a~p~~ 219 (355)
+.+++.|+++++++.+.+|..+ |++.+|.+ +| .+++||.||+|+...
T Consensus 310 ~~~~~~Gv~~~~~~~~~~i~~~---g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~ 377 (456)
T 2vdc_G 310 AHAEEEGVEFIWQAAPEGFTGD---TVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFE 377 (456)
T ss_dssp HHHHHTTCEEECCSSSCCEEEE---EEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEE
T ss_pred HHHHHCCCEEEeCCCceEEeCC---CcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCC
Confidence 4567789999999999999742 33322221 23 468999999999753
No 237
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=65.55 E-value=1.5 Score=38.73 Aligned_cols=44 Identities=20% Similarity=0.310 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChhhH
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTL 221 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~~ 221 (355)
+...|.+.+++.|++|+. ++|++|+..+ .++||.||+|+.++..
T Consensus 144 ~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~-------------~~~a~~VV~A~G~~s~ 187 (351)
T 3g3e_A 144 YLQWLTERLTERGVKFFQ-RKVESFEEVA-------------REGADVIVNCTGVWAG 187 (351)
T ss_dssp HHHHHHHHHHHTTCEEEE-CCCCCHHHHH-------------HTTCSEEEECCGGGGG
T ss_pred HHHHHHHHHHHCCCEEEE-EEeCCHHHhh-------------cCCCCEEEECCCcChH
Confidence 667888888889999988 9998876432 1569999999998763
No 238
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=65.42 E-value=8.4 Score=35.04 Aligned_cols=46 Identities=11% Similarity=0.188 Sum_probs=34.6
Q ss_pred HHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 168 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 168 l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+++.|++++. .+|++|..++ + .|++ +|+++.+|.||+|+...
T Consensus 65 l~~~~~~~gv~~~~-~~v~~id~~~--~---~V~~~~g~~i~~d~lviAtG~~ 111 (437)
T 3sx6_A 65 IRHYVERKGIHFIA-QSAEQIDAEA--Q---NITLADGNTVHYDYLMIATGPK 111 (437)
T ss_dssp CHHHHHTTTCEEEC-SCEEEEETTT--T---EEEETTSCEEECSEEEECCCCE
T ss_pred HHHHHHHCCCEEEE-eEEEEEEcCC--C---EEEECCCCEEECCEEEECCCCC
Confidence 44556678999974 6999998765 2 3555 57789999999999864
No 239
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=64.68 E-value=14 Score=33.96 Aligned_cols=42 Identities=17% Similarity=0.200 Sum_probs=32.3
Q ss_pred HcCcEEEcCceeeEEEecCCCCeEEEEEe--CCe--EEecCEEEEccCh
Q 018455 174 TRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGI 218 (355)
Q Consensus 174 ~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~g~--~~~ad~VV~a~p~ 218 (355)
..|++++++++|..|..++ +.+ .+.. +|+ ++.+|.+|+|+..
T Consensus 105 ~~gv~~~~~~~v~~i~~~~--~~v-~v~~~~~g~~~~~~~d~lviAtG~ 150 (480)
T 3cgb_A 105 KYGIDAKVRHEVTKVDTEK--KIV-YAEHTKTKDVFEFSYDRLLIATGV 150 (480)
T ss_dssp TTCCEEESSEEEEEEETTT--TEE-EEEETTTCCEEEEECSEEEECCCE
T ss_pred hcCCEEEeCCEEEEEECCC--CEE-EEEEcCCCceEEEEcCEEEECCCC
Confidence 3489999999999998765 334 3544 355 7999999999874
No 240
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=64.52 E-value=12 Score=35.31 Aligned_cols=44 Identities=14% Similarity=-0.000 Sum_probs=33.0
Q ss_pred HHHcCcEEEcCceeeEEEecCCCCeEEEEEe--CCe--EEecCEEEEccCh
Q 018455 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGI 218 (355)
Q Consensus 172 l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~g~--~~~ad~VV~a~p~ 218 (355)
.++.|.+++++++|++|..++ +.+ .+.. +|+ ++.+|+||+|+..
T Consensus 68 ~~~~~i~~~~~~~V~~id~~~--~~v-~~~~~~~g~~~~~~~d~lviAtG~ 115 (565)
T 3ntd_A 68 KARFNVEVRVKHEVVAIDRAA--KLV-TVRRLLDGSEYQESYDTLLLSPGA 115 (565)
T ss_dssp HHHHCCEEETTEEEEEEETTT--TEE-EEEETTTCCEEEEECSEEEECCCE
T ss_pred HHhcCcEEEECCEEEEEECCC--CEE-EEEecCCCCeEEEECCEEEECCCC
Confidence 345799999999999998766 334 3443 243 7899999999875
No 241
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=63.96 E-value=15 Score=35.54 Aligned_cols=29 Identities=14% Similarity=0.001 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHcC---cEEEcCceeeEEEecC
Q 018455 164 IFEPWMDSMRTRG---CEFLDGRRVTDFIYDE 192 (355)
Q Consensus 164 l~~~l~~~l~~~G---~~i~l~~~V~~I~~~~ 192 (355)
+-+.|.+.+++.| ++|+.+++|++++.++
T Consensus 121 le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~ 152 (665)
T 1pn0_A 121 IERRILDSIAEISDTRIKVERPLIPEKMEIDS 152 (665)
T ss_dssp HHHHHHHHHHHHHTTSSCEECSEEEEEEEECG
T ss_pred HHHHHHHHHHhcCCCceEEEeCCEEEEEEecC
Confidence 5566777777776 7999999999999875
No 242
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=63.49 E-value=6.1 Score=37.33 Aligned_cols=45 Identities=11% Similarity=0.364 Sum_probs=34.4
Q ss_pred HHHHHHHcCcEEEc--CceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhh
Q 018455 168 WMDSMRTRGCEFLD--GRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (355)
Q Consensus 168 l~~~l~~~G~~i~l--~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.+.+.++++.. +++|++|. ++ +|.+ +| ++++|.||+||.-..
T Consensus 344 y~~al~~~nV~lv~~~~~~I~~it--~~-----gv~~~dG-~~~~D~IV~ATGf~~ 391 (545)
T 3uox_A 344 YYETYNRDNVHLVDIREAPIQEVT--PE-----GIKTADA-AYDLDVIIYATGFDA 391 (545)
T ss_dssp HHHHTTSTTEEEEETTTSCEEEEE--TT-----EEEESSC-EEECSEEEECCCCBS
T ss_pred HHHHhcCCCEEEEecCCCCceEEc--cC-----eEEeCCC-eeecCEEEECCcccc
Confidence 44556677888886 89999986 32 3555 67 999999999999875
No 243
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=62.17 E-value=11 Score=34.34 Aligned_cols=45 Identities=13% Similarity=0.073 Sum_probs=33.2
Q ss_pred HHHcCcEEEcCceeeEEEecCCCCeEEEEEe--C--CeEEecCEEEEccChh
Q 018455 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC--G--KETYSAGAVVLAVGIS 219 (355)
Q Consensus 172 l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~--g~~~~ad~VV~a~p~~ 219 (355)
.++.|.+++++++|++|..+. ..+ .+.. . +.++.+|++|+||...
T Consensus 67 ~~~~~i~~~~~~~V~~id~~~--~~~-~~~~~~~~~~~~~~yd~lVIATGs~ 115 (437)
T 4eqs_A 67 YDRKQITVKTYHEVIAINDER--QTV-SVLNRKTNEQFEESYDKLILSPGAS 115 (437)
T ss_dssp HHHHCCEEEETEEEEEEETTT--TEE-EEEETTTTEEEEEECSEEEECCCEE
T ss_pred HHhcCCEEEeCCeEEEEEccC--cEE-EEEeccCCceEEEEcCEEEECCCCc
Confidence 456799999999999998766 323 3433 2 3468899999999753
No 244
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=61.42 E-value=14 Score=33.18 Aligned_cols=43 Identities=16% Similarity=0.274 Sum_probs=33.8
Q ss_pred HHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccCh
Q 018455 170 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 218 (355)
Q Consensus 170 ~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~ 218 (355)
+.+.+.|.++++ ++|++|..++ . .|.+ +|+++.+|.+|+|+..
T Consensus 65 ~~~~~~~i~~~~-~~v~~id~~~--~---~v~~~~g~~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 65 KFFQDQAIELIS-DRMVSIDREG--R---KLLLASGTAIEYGHLVLATGA 108 (404)
T ss_dssp HHHHHTTEEEEC-CCEEEEETTT--T---EEEESSSCEEECSEEEECCCE
T ss_pred HHHHhCCCEEEE-EEEEEEECCC--C---EEEECCCCEEECCEEEEeeCC
Confidence 445678999999 9999998765 2 3555 6789999999999874
No 245
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=60.41 E-value=9.9 Score=34.70 Aligned_cols=41 Identities=20% Similarity=0.229 Sum_probs=31.6
Q ss_pred HHcCcEEEcCceeeEEEecCCCCeEEEEEeC-C-eEEecCEEEEccCh
Q 018455 173 RTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K-ETYSAGAVVLAVGI 218 (355)
Q Consensus 173 ~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~-g-~~~~ad~VV~a~p~ 218 (355)
++.|.+++++++|++|..++ . .|.++ + .++.+|.||+|+..
T Consensus 70 ~~~gi~v~~~~~v~~i~~~~----~-~v~~~~g~~~~~~d~lviAtG~ 112 (449)
T 3kd9_A 70 KKRGIDLHLNAEVIEVDTGY----V-RVRENGGEKSYEWDYLVFANGA 112 (449)
T ss_dssp HHTTCEEETTCEEEEECSSE----E-EEECSSSEEEEECSEEEECCCE
T ss_pred HhcCcEEEecCEEEEEecCC----C-EEEECCceEEEEcCEEEECCCC
Confidence 56799999999999996532 2 35554 4 48999999999874
No 246
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=58.15 E-value=5.3 Score=37.71 Aligned_cols=43 Identities=14% Similarity=0.207 Sum_probs=32.4
Q ss_pred HHHcCcEEEc--CceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhhH
Q 018455 172 MRTRGCEFLD--GRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTL 221 (355)
Q Consensus 172 l~~~G~~i~l--~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~~ 221 (355)
+.+.++++.. +++|.+|. ++ +|.+ +|+++++|.||+||.-...
T Consensus 340 l~~~nV~lv~~~~~~I~~it--~~-----gv~~~dG~~~~~DvIV~ATGf~~~ 385 (540)
T 3gwf_A 340 YNRPNVEAVAIKENPIREVT--AK-----GVVTEDGVLHELDVLVFATGFDAV 385 (540)
T ss_dssp GGSTTEEEEETTTSCEEEEC--SS-----EEEETTCCEEECSEEEECCCBSCS
T ss_pred hcCCCEEEEeCCCCCccEEe--cC-----eEEcCCCCEEECCEEEECCccCcc
Confidence 4456788875 78898886 32 3555 7888999999999987654
No 247
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=57.95 E-value=13 Score=33.24 Aligned_cols=48 Identities=13% Similarity=0.257 Sum_probs=34.2
Q ss_pred HHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCe----EEecCEEEEccChh
Q 018455 167 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKE----TYSAGAVVLAVGIS 219 (355)
Q Consensus 167 ~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~----~~~ad~VV~a~p~~ 219 (355)
.+.+.+++.|++++.+ +|++|..++ ..| .+. +++ ++++|.||+|+...
T Consensus 61 ~~~~~~~~~gv~~~~~-~v~~i~~~~--~~V-~~~-~g~~~~~~~~~d~lViAtG~~ 112 (409)
T 3h8l_A 61 DLSEALPEKGIQFQEG-TVEKIDAKS--SMV-YYT-KPDGSMAEEEYDYVIVGIGAH 112 (409)
T ss_dssp EHHHHTGGGTCEEEEC-EEEEEETTT--TEE-EEE-CTTSCEEEEECSEEEECCCCE
T ss_pred HHHHHHhhCCeEEEEe-eEEEEeCCC--CEE-EEc-cCCcccceeeCCEEEECCCCC
Confidence 4566677789999988 999998765 223 222 332 48999999998763
No 248
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=57.79 E-value=27 Score=29.53 Aligned_cols=52 Identities=8% Similarity=0.127 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccCh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGI 218 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~ 218 (355)
+.+.+.+.+++.+.++..++ |..+....+. ...++.++.++.+|+||+||..
T Consensus 68 l~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~--~~~~~~~~~~~~~~~liiATG~ 119 (314)
T 4a5l_A 68 LMMNMRTQSEKYGTTIITET-IDHVDFSTQP--FKLFTEEGKEVLTKSVIIATGA 119 (314)
T ss_dssp HHHHHHHHHHHTTCEEECCC-EEEEECSSSS--EEEEETTCCEEEEEEEEECCCE
T ss_pred HHHHHHHHHhhcCcEEEEeE-EEEeecCCCc--eEEEECCCeEEEEeEEEEcccc
Confidence 44556666777888877654 5556655532 3223336789999999999985
No 249
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=57.14 E-value=16 Score=33.55 Aligned_cols=42 Identities=21% Similarity=0.217 Sum_probs=30.2
Q ss_pred HcCcEEEcCceeeEEEecCCCCeEEEEEe--CCe--EEecCEEEEccCh
Q 018455 174 TRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGI 218 (355)
Q Consensus 174 ~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~g~--~~~ad~VV~a~p~ 218 (355)
..|.+++++++|++|..++ +.+ .+.. +|+ ++.+|.+|+|+..
T Consensus 78 ~~gi~~~~~~~V~~id~~~--~~v-~~~~~~~g~~~~~~~d~lviAtG~ 123 (472)
T 3iwa_A 78 NKDVEALVETRAHAIDRAA--HTV-EIENLRTGERRTLKYDKLVLALGS 123 (472)
T ss_dssp ---CEEECSEEEEEEETTT--TEE-EEEETTTCCEEEEECSEEEECCCE
T ss_pred hcCcEEEECCEEEEEECCC--CEE-EEeecCCCCEEEEECCEEEEeCCC
Confidence 4689999999999998766 334 3443 254 7899999999864
No 250
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=56.95 E-value=4.8 Score=35.45 Aligned_cols=43 Identities=23% Similarity=0.228 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChhhH
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTL 221 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~~ 221 (355)
+...|.+.+++.|++|+. ++|++|..+ .+ +||.||+|+.++..
T Consensus 144 ~~~~l~~~~~~~G~~i~~-~~v~~l~~~-------------~~-~a~~VV~A~G~~s~ 186 (363)
T 1c0p_A 144 YCQYLARELQKLGATFER-RTVTSLEQA-------------FD-GADLVVNATGLGAK 186 (363)
T ss_dssp HHHHHHHHHHHTTCEEEE-CCCSBGGGT-------------CS-SCSEEEECCGGGGG
T ss_pred HHHHHHHHHHHCCCEEEE-EEcccHhhc-------------Cc-CCCEEEECCCcchh
Confidence 668888889899999998 999988532 02 79999999998863
No 251
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=54.24 E-value=25 Score=31.98 Aligned_cols=47 Identities=19% Similarity=0.272 Sum_probs=33.2
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CC-eEEecCEEEEccCh
Q 018455 166 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK-ETYSAGAVVLAVGI 218 (355)
Q Consensus 166 ~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g-~~~~ad~VV~a~p~ 218 (355)
+.+.+.+++.|++++.++.+. + ++ +.+ .|.+ +| +++.+|.||+|+..
T Consensus 95 ~~~~~~~~~~gv~~~~g~~~~-i--d~--~~v-~V~~~~G~~~i~~d~lViATGs 143 (455)
T 1ebd_A 95 GGVEGLLKGNKVEIVKGEAYF-V--DA--NTV-RVVNGDSAQTYTFKNAIIATGS 143 (455)
T ss_dssp HHHHHHHHTTTCEEEESEEEE-E--ET--TEE-EEEETTEEEEEECSEEEECCCE
T ss_pred HHHHHHHHhCCCEEEEEEEEE-c--cC--CeE-EEEeCCCcEEEEeCEEEEecCC
Confidence 445556677899999999764 3 33 224 4655 45 68999999999975
No 252
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=52.91 E-value=26 Score=32.04 Aligned_cols=50 Identities=16% Similarity=0.049 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CC--eEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK--ETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g--~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|++++.++.+. .++ +.+ .|.+ +| +++.+|.||+|+...
T Consensus 93 l~~~l~~~~~~~gv~~~~g~~~~---id~--~~v-~V~~~~G~~~~~~~d~lViAtG~~ 145 (464)
T 2a8x_A 93 RVAGVHFLMKKNKITEIHGYGTF---ADA--NTL-LVDLNDGGTESVTFDNAIIATGSS 145 (464)
T ss_dssp HHHHHHHHHHHTTCEEECEEEEE---SSS--SEE-EEEETTSCCEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHhCCCEEEEeEEEE---ecC--CeE-EEEeCCCceEEEEcCEEEECCCCC
Confidence 33445666777899999998764 333 334 4655 56 689999999999764
No 253
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=52.57 E-value=3.7 Score=36.84 Aligned_cols=41 Identities=15% Similarity=0.174 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChh
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+.+++.|+++++++.|.+| |++++||.||++++..
T Consensus 190 ~~~~~~~~l~~~gV~~~~~~~v~~i---------------g~~~~~D~vv~a~G~~ 230 (385)
T 3klj_A 190 GGLFLKDKLDRLGIKIYTNSNFEEM---------------GDLIRSSCVITAVGVK 230 (385)
T ss_dssp HHHHHHHHHHTTTCEEECSCCGGGC---------------HHHHHHSEEEECCCEE
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEc---------------CeEEecCeEEECcCcc
Confidence 5566777888899999999999876 2356678888877653
No 254
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=51.43 E-value=23 Score=31.45 Aligned_cols=42 Identities=21% Similarity=0.297 Sum_probs=31.3
Q ss_pred HHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 172 l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
+.+.|+++..+ +|++|..++ . .|++ +|+++.+|.+|+|+...
T Consensus 65 ~~~~gv~~i~~-~v~~id~~~--~---~v~~~~g~~i~yd~LviAtG~~ 107 (401)
T 3vrd_B 65 LRAHGIQVVHD-SALGIDPDK--K---LVKTAGGAEFAYDRCVVAPGID 107 (401)
T ss_dssp HHHTTCEEECS-CEEEEETTT--T---EEEETTSCEEECSEEEECCCEE
T ss_pred HHHCCCEEEEe-EEEEEEccC--c---EEEecccceeecceeeeccCCc
Confidence 34578998655 688998765 2 2444 67899999999999864
No 255
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=51.33 E-value=29 Score=31.70 Aligned_cols=48 Identities=10% Similarity=0.126 Sum_probs=33.3
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CC--eEEecCEEEEccChh
Q 018455 166 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK--ETYSAGAVVLAVGIS 219 (355)
Q Consensus 166 ~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g--~~~~ad~VV~a~p~~ 219 (355)
+.+.+.+++.|++++.++.+. + +. +.+ .|.+ +| +++++|.||+|+...
T Consensus 100 ~~~~~~~~~~gv~~~~g~~~~-~--~~--~~~-~v~~~~G~~~~i~~d~lIiAtGs~ 150 (470)
T 1dxl_A 100 RGIEGLFKKNKVTYVKGYGKF-V--SP--SEI-SVDTIEGENTVVKGKHIIIATGSD 150 (470)
T ss_dssp HHHHHHHHHHTCEEEESCEEE-E--ET--TEE-EECCSSSCCEEEECSEEEECCCEE
T ss_pred HHHHHHHHhCCCEEEEeEEEE-e--cC--CEE-EEEeCCCceEEEEcCEEEECCCCC
Confidence 345555667799999999764 3 33 223 4554 45 689999999999753
No 256
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=50.59 E-value=22 Score=32.62 Aligned_cols=50 Identities=16% Similarity=0.164 Sum_probs=34.7
Q ss_pred HHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CC--eE------EecCEEEEccChhh
Q 018455 165 FEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK--ET------YSAGAVVLAVGIST 220 (355)
Q Consensus 165 ~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g--~~------~~ad~VV~a~p~~~ 220 (355)
.+.+.+.+++.|++++.++.+.. ++ +.+ .|.+ +| ++ +.+|.||+|+....
T Consensus 99 ~~~~~~~~~~~gv~~~~g~~~~~---~~--~~v-~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p 157 (478)
T 1v59_A 99 TGGIELLFKKNKVTYYKGNGSFE---DE--TKI-RVTPVDGLEGTVKEDHILDVKNIIVATGSEV 157 (478)
T ss_dssp HHHHHHHHHHTTCEEEESEEEES---SS--SEE-EEECCTTCTTCCSSCEEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHhCCCEEEEEEEEEc---cC--CeE-EEEecCCCcccccccceEEeCEEEECcCCCC
Confidence 34455566778999999998752 33 334 4655 45 46 99999999998653
No 257
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=49.05 E-value=36 Score=28.84 Aligned_cols=51 Identities=18% Similarity=0.179 Sum_probs=35.9
Q ss_pred HHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChh
Q 018455 165 FEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (355)
Q Consensus 165 ~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~ 219 (355)
.........+.+..+..+..+....... ...+..++++++||++|+||...
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~d~liiAtGs~ 115 (312)
T 4gcm_A 65 STKMFEHAKKFGAVYQYGDIKSVEDKGE----YKVINFGNKELTAKAVIIATGAE 115 (312)
T ss_dssp HHHHHHHHHHTTCEEEECCCCEEEECSS----CEEEECSSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHhhccccccceeeeeeeeeec----ceeeccCCeEEEeceeEEcccCc
Confidence 3444455566778888888877766544 12355678899999999999853
No 258
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=47.61 E-value=19 Score=33.28 Aligned_cols=43 Identities=21% Similarity=0.144 Sum_probs=31.6
Q ss_pred HcCcEEEcCceeeEEEecCCCCeEEEEE-eCCe--EEecCEEEEccCh
Q 018455 174 TRGCEFLDGRRVTDFIYDEERCCISDVV-CGKE--TYSAGAVVLAVGI 218 (355)
Q Consensus 174 ~~G~~i~l~~~V~~I~~~~~~~~v~~v~-~~g~--~~~ad~VV~a~p~ 218 (355)
+.|.++++++.|.+|..+++ .+..+. .+++ ++.+|++|+|+..
T Consensus 172 ~~~v~~~~~~~v~~i~~~~~--~~~~~~~~~~~~~~~~~d~lvlAtGa 217 (493)
T 1y56_A 172 NENTKIYLETSALGVFDKGE--YFLVPVVRGDKLIEILAKRVVLATGA 217 (493)
T ss_dssp CTTEEEETTEEECCCEECSS--SEEEEEEETTEEEEEEESCEEECCCE
T ss_pred hcCCEEEcCCEEEEEEcCCc--EEEEEEecCCeEEEEECCEEEECCCC
Confidence 45889999999999988763 242223 2454 6899999999864
No 259
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=46.31 E-value=14 Score=33.45 Aligned_cols=43 Identities=16% Similarity=0.190 Sum_probs=31.9
Q ss_pred HHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 171 SMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 171 ~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
.+++.|++++.+ .|+.|..++ . .|.+ +++++.+|.+|+|+...
T Consensus 65 ~~~~~gv~~~~~-~v~~id~~~--~---~v~~~~g~~i~~d~liiAtG~~ 108 (430)
T 3h28_A 65 LLPKFNIEFINE-KAESIDPDA--N---TVTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp TGGGGTEEEECS-CEEEEETTT--T---EEEETTCCEEECSEEEECCCCE
T ss_pred HHHhcCCEEEEE-EEEEEECCC--C---EEEECCCcEEECCEEEEcCCcc
Confidence 345678999875 899998654 2 3555 56789999999998754
No 260
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=45.64 E-value=14 Score=34.92 Aligned_cols=43 Identities=19% Similarity=0.381 Sum_probs=31.7
Q ss_pred HHHHcCcEEE--cCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChhhH
Q 018455 171 SMRTRGCEFL--DGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTL 221 (355)
Q Consensus 171 ~l~~~G~~i~--l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~~~ 221 (355)
.+.+.++++. ..++|++|.- + +|.+ +| ++++|.||+||.....
T Consensus 352 al~~~~V~lvd~~~~~I~~it~--~-----gv~~~dG-~~~~D~iI~ATGf~~~ 397 (549)
T 4ap3_A 352 TYNRDNVELVDLRSTPIVGMDE--T-----GIVTTGA-HYDLDMIVLATGFDAM 397 (549)
T ss_dssp GGGSTTEEEEETTTSCEEEEET--T-----EEEESSC-EEECSEEEECCCEEES
T ss_pred HhcCCCEEEEeCCCCCceEEeC--C-----cEEeCCC-ceecCEEEECCccccc
Confidence 3456678886 3688998873 2 3555 67 9999999999997653
No 261
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=44.81 E-value=34 Score=31.38 Aligned_cols=48 Identities=13% Similarity=0.192 Sum_probs=33.0
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CC------------eEEecCEEEEccChh
Q 018455 166 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK------------ETYSAGAVVLAVGIS 219 (355)
Q Consensus 166 ~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g------------~~~~ad~VV~a~p~~ 219 (355)
+.+...+++.|++++.++.+. .++ +.+ .|.+ +| .++++|.||+|+...
T Consensus 99 ~~~~~~~~~~gv~~~~g~~~~---~~~--~~v-~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~ 159 (482)
T 1ojt_A 99 GGLAGMAKSRKVDVIQGDGQF---LDP--HHL-EVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSR 159 (482)
T ss_dssp HHHHHHHHHTTCEEEEEEEEE---EET--TEE-EEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEE
T ss_pred HHHHHHHHhCCcEEEeeEEEE---ccC--CEE-EEEecCCcccccccccCcceEEEcCEEEECCCCC
Confidence 345556677899999998765 233 234 3543 44 578999999999865
No 262
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=43.77 E-value=7.6 Score=34.54 Aligned_cols=45 Identities=18% Similarity=0.113 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChhhH
Q 018455 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTL 221 (355)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~~ 221 (355)
+.+.|.+.+++.|++|+++++|++|+.. .+++||.||.|......
T Consensus 100 l~~~L~~~~~~~gv~i~~~~~v~~i~~~-------------~~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 100 LVHALRDKCRSQGIAIRFESPLLEHGEL-------------PLADYDLVVLANGVNHK 144 (381)
T ss_dssp HHHHHHHHHHHTTCEEETTCCCCSGGGC-------------CGGGCSEEEECCGGGGG
T ss_pred HHHHHHHHHHHCCCEEEeCCEeccchhc-------------ccccCCEEEECCCCCch
Confidence 5677888888889999999999988531 13579999999998765
No 263
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=42.34 E-value=56 Score=29.79 Aligned_cols=44 Identities=27% Similarity=0.371 Sum_probs=30.8
Q ss_pred HHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChh
Q 018455 168 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (355)
Q Consensus 168 l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~ 219 (355)
+...+++.|++++.++.+. + ++ + .|.++|+++++|+||+|+...
T Consensus 99 ~~~~~~~~gv~~~~g~~~~-~--~~--~---~v~v~g~~~~~d~lViATGs~ 142 (464)
T 2eq6_A 99 VGTLLKGNGVELLRGFARL-V--GP--K---EVEVGGERYGAKSLILATGSE 142 (464)
T ss_dssp HHHHHHHTTCEEEESCEEE-E--ET--T---EEEETTEEEEEEEEEECCCEE
T ss_pred HHHHHHhCCCEEEeeeEEE-c--cC--C---EEEEccEEEEeCEEEEcCCCC
Confidence 4445667899999998654 3 23 2 244447889999999999753
No 264
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=40.24 E-value=73 Score=28.90 Aligned_cols=44 Identities=18% Similarity=0.265 Sum_probs=31.5
Q ss_pred HHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChh
Q 018455 168 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (355)
Q Consensus 168 l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~ 219 (355)
+.+.+++.|++++.++.+. + ++ . .|.++++++.+|++|+||...
T Consensus 102 ~~~~~~~~gv~~~~g~~~~-~--~~--~---~v~v~~~~~~~d~lviATGs~ 145 (458)
T 1lvl_A 102 VAALLKKHGVKVVHGWAKV-L--DG--K---QVEVDGQRIQCEHLLLATGSS 145 (458)
T ss_dssp HHHHHHHTTCEEECSCEEE-E--ET--T---EEEETTEEEECSEEEECCCEE
T ss_pred HHHHHHhCCcEEEEEEEEE-c--cC--C---EEEEeeEEEEeCEEEEeCCCC
Confidence 4455677899999998765 3 22 2 355555889999999999753
No 265
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=40.16 E-value=35 Score=30.99 Aligned_cols=46 Identities=17% Similarity=0.054 Sum_probs=31.1
Q ss_pred HHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccCh
Q 018455 167 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGI 218 (355)
Q Consensus 167 ~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~ 218 (355)
.+.+.+++.|++++.++.+. .+. +.+ .|.++|+++.+|++|+|+..
T Consensus 94 ~~~~~~~~~~v~~~~g~~~~---i~~--~~~-~v~~~g~~~~~d~lviAtG~ 139 (455)
T 2yqu_A 94 GVEFLFKKNGIARHQGTARF---LSE--RKV-LVEETGEELEARYILIATGS 139 (455)
T ss_dssp HHHHHHHHHTCEEEESCEEE---SSS--SEE-EETTTCCEEEEEEEEECCCE
T ss_pred HHHHHHHhCCCEEEEeEEEE---ecC--CeE-EEeeCCEEEEecEEEECCCC
Confidence 34455667799999988653 233 223 34335778999999999975
No 266
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=38.59 E-value=57 Score=29.67 Aligned_cols=47 Identities=13% Similarity=0.089 Sum_probs=33.0
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CC--eEEecCEEEEccCh
Q 018455 166 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK--ETYSAGAVVLAVGI 218 (355)
Q Consensus 166 ~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g--~~~~ad~VV~a~p~ 218 (355)
..+.+.+++.|++++.++.+. + +. +.+ .|.+ +| +++.+|++|+|+..
T Consensus 97 ~~~~~~~~~~~v~~~~g~~~~-i--~~--~~~-~v~~~~G~~~~~~~d~lviAtG~ 146 (468)
T 2qae_A 97 GGVEYLFKKNKVTYYKGEGSF-E--TA--HSI-RVNGLDGKQEMLETKKTIIATGS 146 (468)
T ss_dssp HHHHHHHHHHTCEEEEEEEEE-E--ET--TEE-EEEETTSCEEEEEEEEEEECCCE
T ss_pred HHHHHHHHhCCCEEEEEEEEE-e--eC--CEE-EEEecCCceEEEEcCEEEECCCC
Confidence 345556677899999998653 4 33 224 4655 56 68999999999985
No 267
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=35.47 E-value=88 Score=26.19 Aligned_cols=46 Identities=9% Similarity=0.121 Sum_probs=32.7
Q ss_pred HHHHcCcEEEcCceeeEEEecCCCCeEEEEEe------CCeEEecCEEEEccCh
Q 018455 171 SMRTRGCEFLDGRRVTDFIYDEERCCISDVVC------GKETYSAGAVVLAVGI 218 (355)
Q Consensus 171 ~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~------~g~~~~ad~VV~a~p~ 218 (355)
.....+.+.+..+.+.++...++. ..++.. +++++++|.|++|+..
T Consensus 197 ~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~i~~d~vi~a~G~ 248 (314)
T 4a5l_A 197 VLNHPKIEVIWNSELVELEGDGDL--LNGAKIHNLVSGEYKVVPVAGLFYAIGH 248 (314)
T ss_dssp HHTCTTEEEECSEEEEEEEESSSS--EEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred hhcccceeeEeeeeeEEEEeeeec--cceeEEeecccccceeeccccceEeccc
Confidence 344567888999999999876532 334432 2468999999999864
No 268
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=35.10 E-value=81 Score=28.68 Aligned_cols=45 Identities=20% Similarity=0.220 Sum_probs=31.0
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccCh
Q 018455 166 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGI 218 (355)
Q Consensus 166 ~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~ 218 (355)
..+.+.+++.|++++.++. ..+. . . .|.++|+++.+|++|+|+..
T Consensus 96 ~~~~~~~~~~gv~~~~g~~-~~i~--~--~---~v~~~g~~~~~d~lviAtGs 140 (463)
T 2r9z_A 96 SFWDGYVERLGITRVDGHA-RFVD--A--H---TIEVEGQRLSADHIVIATGG 140 (463)
T ss_dssp HHHHHHHHHTTCEEEESCE-EEEE--T--T---EEEETTEEEEEEEEEECCCE
T ss_pred HHHHHHHHHCCCEEEEeEE-EEcc--C--C---EEEECCEEEEcCEEEECCCC
Confidence 3444556678999998864 3342 2 2 24448888999999999975
No 269
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=34.03 E-value=91 Score=28.34 Aligned_cols=47 Identities=6% Similarity=0.060 Sum_probs=32.1
Q ss_pred HHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-C-C-eEEecCEEEEccChh
Q 018455 167 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G-K-ETYSAGAVVLAVGIS 219 (355)
Q Consensus 167 ~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~-g-~~~~ad~VV~a~p~~ 219 (355)
.+.+.+++.|+++++++.+ .+ +. +.+ .|.+ + | +++.+|.||+|+...
T Consensus 102 ~~~~~~~~~gv~~~~g~~~-~~--~~--~~~-~v~~~~gg~~~~~~d~lViAtGs~ 151 (474)
T 1zmd_A 102 GIAHLFKQNKVVHVNGYGK-IT--GK--NQV-TATKADGGTQVIDTKNILIATGSE 151 (474)
T ss_dssp HHHHHHHHTTCEEEESEEE-EE--ET--TEE-EEECTTSCEEEEEEEEEEECCCEE
T ss_pred HHHHHHHhCCCEEEEEEEE-Ee--cC--CEE-EEEecCCCcEEEEeCEEEECCCCC
Confidence 3455567789999999764 23 33 223 4655 4 4 579999999999863
No 270
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=33.87 E-value=38 Score=31.69 Aligned_cols=46 Identities=13% Similarity=0.296 Sum_probs=31.6
Q ss_pred HHHHHHHcCcEEE--cCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccChhh
Q 018455 168 WMDSMRTRGCEFL--DGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (355)
Q Consensus 168 l~~~l~~~G~~i~--l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~~~ 220 (355)
+.+.+.+.++++. .+++|++|. ++ +|+++++++++|.||+||....
T Consensus 344 y~~~~~~~~v~lv~~~~~~i~~i~--~~-----gv~~~d~~~~~D~ii~atG~~~ 391 (542)
T 1w4x_A 344 YYEMFNRDNVHLVDTLSAPIETIT--PR-----GVRTSEREYELDSLVLATGFDA 391 (542)
T ss_dssp HHHHTTSTTEEEEETTTSCEEEEC--SS-----EEEESSCEEECSEEEECCCCCC
T ss_pred HHHHhCCCCEEEEecCCCCceEEc--CC-----eEEeCCeEEecCEEEEcCCccc
Confidence 3344455556665 478899885 32 4555338899999999998875
No 271
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=32.44 E-value=51 Score=30.03 Aligned_cols=45 Identities=13% Similarity=0.031 Sum_probs=31.0
Q ss_pred HHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCeE--EecCEEEEccCh
Q 018455 168 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKET--YSAGAVVLAVGI 218 (355)
Q Consensus 168 l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~--~~ad~VV~a~p~ 218 (355)
+...+++.|++++.+ .|..+. . +.+ .|.+ +|++ +.+|+||+|+..
T Consensus 95 ~~~~~~~~~v~~~~g-~v~~id--~--~~~-~V~~~~g~~~~~~~d~lviAtG~ 142 (466)
T 3l8k_A 95 KRNMSQYETLTFYKG-YVKIKD--P--THV-IVKTDEGKEIEAETRYMIIASGA 142 (466)
T ss_dssp HHHHTTCTTEEEESE-EEEEEE--T--TEE-EEEETTSCEEEEEEEEEEECCCE
T ss_pred HHHHHHhCCCEEEEe-EEEEec--C--CeE-EEEcCCCcEEEEecCEEEECCCC
Confidence 334455678898888 566665 3 223 4655 5667 999999999975
No 272
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=32.23 E-value=57 Score=30.01 Aligned_cols=51 Identities=18% Similarity=0.185 Sum_probs=33.1
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEecC--CCCeEEEEEe-CCe--EEecCEEEEccCh
Q 018455 166 EPWMDSMRTRGCEFLDGRRVTDFIYDE--ERCCISDVVC-GKE--TYSAGAVVLAVGI 218 (355)
Q Consensus 166 ~~l~~~l~~~G~~i~l~~~V~~I~~~~--~~~~v~~v~~-~g~--~~~ad~VV~a~p~ 218 (355)
+.+.+.+++.|++++.++ |..|..++ +++.+ .|.+ +|+ ++.+|.+|+|+..
T Consensus 99 ~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~~~~-~V~~~~g~~~~~~~d~lviATGs 154 (499)
T 1xdi_A 99 ADITAQLLSMGVQVIAGR-GELIDSTPGLARHRI-KATAADGSTSEHEADVVLVATGA 154 (499)
T ss_dssp HHHHHHHHHTTCEEEESE-EEECCSSSCCSSEEE-EEECTTSCEEEEEESEEEECCCE
T ss_pred HHHHHHHHhCCCEEEEeE-EEEecCcccCCCCEE-EEEeCCCcEEEEEeCEEEEcCCC
Confidence 345566677899999997 66555420 00123 4554 455 7999999999864
No 273
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=31.78 E-value=72 Score=29.30 Aligned_cols=47 Identities=19% Similarity=0.168 Sum_probs=32.0
Q ss_pred HHHHHHHHHc-CcEEEcCceeeEEEecCCCCeEEEEEe----CC---eEEecCEEEEccCh
Q 018455 166 EPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC----GK---ETYSAGAVVLAVGI 218 (355)
Q Consensus 166 ~~l~~~l~~~-G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g---~~~~ad~VV~a~p~ 218 (355)
+.+.+.+++. |++++.++ |+.|. . ..+ .+.. +| +++.+|++|+|+..
T Consensus 107 ~~~~~~l~~~~gv~~~~g~-~~~i~--~--~~v-~v~~~~~~~g~~~~~~~~d~lviAtGs 161 (490)
T 1fec_A 107 DSYEGMFADTEGLTFHQGF-GALQD--N--HTV-LVRESADPNSAVLETLDTEYILLATGS 161 (490)
T ss_dssp HHHHHHHHTSTTEEEEESE-EEEEE--T--TEE-EEESSSSTTSCEEEEEEEEEEEECCCE
T ss_pred HHHHHHHhcCCCcEEEEeE-EEEee--C--CEE-EEEeeccCCCCceEEEEcCEEEEeCCC
Confidence 3445556677 99999987 55553 3 224 3543 56 68999999999875
No 274
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=30.91 E-value=68 Score=29.26 Aligned_cols=47 Identities=13% Similarity=0.227 Sum_probs=30.9
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccCh
Q 018455 166 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGI 218 (355)
Q Consensus 166 ~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~ 218 (355)
+.+...++..|+++..++. ..+ +.+ .. .|..+++++.+|+||+|+..
T Consensus 112 ~~~~~~~~~~gv~~~~g~~-~~~--~~~--~~-~v~~~g~~~~~d~lviAtG~ 158 (478)
T 3dk9_A 112 AIYQNNLTKSHIEIIRGHA-AFT--SDP--KP-TIEVSGKKYTAPHILIATGG 158 (478)
T ss_dssp HHHHHHHHHTTCEEEESCE-EEC--SCS--SC-EEEETTEEEECSCEEECCCE
T ss_pred HHHHHHHHhCCcEEEEeEE-EEe--eCC--eE-EEEECCEEEEeeEEEEccCC
Confidence 3444556677899888763 222 221 12 35568889999999999864
No 275
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=30.63 E-value=64 Score=29.80 Aligned_cols=42 Identities=21% Similarity=0.274 Sum_probs=25.4
Q ss_pred EEEcCceeeEEEecCCCCeEE-----------EEEe-CCeEEecCEEEEccChh
Q 018455 178 EFLDGRRVTDFIYDEERCCIS-----------DVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 178 ~i~l~~~V~~I~~~~~~~~v~-----------~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
.+..+..|.++....+.+++. ++.+ +|+++++|.||+||.-.
T Consensus 355 ~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~ 408 (501)
T 4b63_A 355 RILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYN 408 (501)
T ss_dssp EEECSEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEE
T ss_pred eecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCC
Confidence 455666666666543323221 1222 57789999999999864
No 276
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=30.62 E-value=42 Score=28.79 Aligned_cols=37 Identities=16% Similarity=0.169 Sum_probs=27.7
Q ss_pred cCcEEEcCceeeEEEecCCCCeEEEEEe-CCeEEecCEEEEccChh
Q 018455 175 RGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 175 ~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VV~a~p~~ 219 (355)
.|. +..+..|.++..+ +|.+ +|++++||.||+|++..
T Consensus 247 ~g~-i~~~~~v~~~~~~-------~v~~~~g~~i~~D~vi~a~G~~ 284 (357)
T 4a9w_A 247 RGV-LAAVPPPARFSPT-------GMQWADGTERAFDAVIWCTGFR 284 (357)
T ss_dssp TTC-CCEECCCSEEETT-------EEECTTSCEEECSEEEECCCBC
T ss_pred cCc-eEEecCcceEeCC-------eeEECCCCEecCCEEEECCCcC
Confidence 344 7888888887631 3555 78899999999999864
No 277
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=29.88 E-value=76 Score=28.98 Aligned_cols=47 Identities=15% Similarity=0.210 Sum_probs=31.5
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CCe--EEecCEEEEccCh
Q 018455 166 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE--TYSAGAVVLAVGI 218 (355)
Q Consensus 166 ~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~--~~~ad~VV~a~p~ 218 (355)
..+.+.+++.|++++.++ |..| +. +.+ .|.+ +|+ ++.+|.+|+|+..
T Consensus 109 ~~~~~~~~~~gv~~~~g~-~~~i--~~--~~~-~v~~~~g~~~~~~~d~lviAtGs 158 (479)
T 2hqm_A 109 GIYQKNLEKEKVDVVFGW-ARFN--KD--GNV-EVQKRDNTTEVYSANHILVATGG 158 (479)
T ss_dssp HHHHHHHHHTTEEEEEEE-EEEC--TT--SCE-EEEESSSCCEEEEEEEEEECCCE
T ss_pred HHHHHHHHhCCCEEEEeE-EEEe--eC--CEE-EEEeCCCcEEEEEeCEEEEcCCC
Confidence 344555667899998886 5544 33 224 4555 555 7999999999964
No 278
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=28.60 E-value=1.1e+02 Score=27.49 Aligned_cols=44 Identities=14% Similarity=0.184 Sum_probs=30.3
Q ss_pred HHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccCh
Q 018455 167 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGI 218 (355)
Q Consensus 167 ~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~ 218 (355)
.+...+++.|++++.++. ..+. . . .|.++|+++.+|.+|+|+..
T Consensus 98 ~~~~~~~~~~v~~~~g~~-~~i~--~--~---~v~~~g~~~~~d~lviAtGs 141 (450)
T 1ges_A 98 SYENVLGKNNVDVIKGFA-RFVD--A--K---TLEVNGETITADHILIATGG 141 (450)
T ss_dssp HHHHHHHHTTCEEEESCC-EEEE--T--T---EEEETTEEEEEEEEEECCCE
T ss_pred HHHHHHHhCCCEEEEeEE-EEec--C--C---EEEECCEEEEeCEEEECCCC
Confidence 344455677999998864 4443 2 2 23347888999999999874
No 279
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=27.97 E-value=97 Score=31.42 Aligned_cols=50 Identities=18% Similarity=0.056 Sum_probs=33.4
Q ss_pred HHHHHHHHHc-CcEEEcCceeeEEEecCCCCeEEEEEe----------------CCeEEecCEEEEccCh
Q 018455 166 EPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC----------------GKETYSAGAVVLAVGI 218 (355)
Q Consensus 166 ~~l~~~l~~~-G~~i~l~~~V~~I~~~~~~~~v~~v~~----------------~g~~~~ad~VV~a~p~ 218 (355)
+.+.+.+.+. ++++++++.|.+|..++ .+..+.. ++.++.+|+||+||..
T Consensus 185 ~~~~~~l~~~~~v~~~~~~~V~~i~~~~---~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs 251 (965)
T 2gag_A 185 EQVTSELAEAEETTHLQRTTVFGSYDAN---YLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGA 251 (965)
T ss_dssp HHHHHHHHHSTTEEEESSEEEEEEETTT---EEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCE
T ss_pred HHHHHHHhhcCCcEEEeCCEEEeeecCC---ceeeeEeecccccccccccCCCCceEEEECCEEEECCCC
Confidence 4455556664 89999999999987432 2322211 1136899999999976
No 280
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=26.52 E-value=80 Score=28.66 Aligned_cols=43 Identities=9% Similarity=0.036 Sum_probs=29.2
Q ss_pred HHHHHc-CcEEEcCceeeEEEecCCCCeEEEEEe-CC--eEEecCEEEEccCh
Q 018455 170 DSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC-GK--ETYSAGAVVLAVGI 218 (355)
Q Consensus 170 ~~l~~~-G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g--~~~~ad~VV~a~p~ 218 (355)
+.+++. |++++.++ |..+. . +.+ .|.+ +| +++++|++|+|+..
T Consensus 102 ~~~~~~~~v~~~~g~-~~~~~--~--~~~-~v~~~~g~~~~~~~d~lviAtGs 148 (467)
T 1zk7_A 102 GILGGNPAITVVHGE-ARFKD--D--QSL-TVRLNEGGERVVMFDRCLVATGA 148 (467)
T ss_dssp HHHTTCTTEEEEEEE-EEEEE--T--TEE-EEEETTSSEEEEECSEEEECCCE
T ss_pred HHHhccCCeEEEEEE-EEEcc--C--CEE-EEEeCCCceEEEEeCEEEEeCCC
Confidence 334555 88988875 66554 3 224 4555 56 68999999999974
No 281
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=24.65 E-value=1e+02 Score=28.28 Aligned_cols=47 Identities=21% Similarity=0.237 Sum_probs=30.8
Q ss_pred HHHHHHHHHc-CcEEEcCceeeEEEecCCCCeEEEEEe--C-----CeEEecCEEEEccCh
Q 018455 166 EPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC--G-----KETYSAGAVVLAVGI 218 (355)
Q Consensus 166 ~~l~~~l~~~-G~~i~l~~~V~~I~~~~~~~~v~~v~~--~-----g~~~~ad~VV~a~p~ 218 (355)
..+...+++. |++++.++ |+.|. + ..| .+.. + ++++.+|++|+|+..
T Consensus 111 ~~~~~~l~~~~gv~~~~g~-~~~i~--~--~~v-~v~~~~~~~~~~~~~~~~d~lViATGs 165 (495)
T 2wpf_A 111 KSYEGMFNDTEGLDFFLGW-GSLES--K--NVV-VVRETADPKSAVKERLQADHILLATGS 165 (495)
T ss_dssp HHHHHHHHHCTTEEEEESE-EEEEE--T--TEE-EEESSSSTTSCEEEEEEEEEEEECCCE
T ss_pred HHHHHHHhcCCCeEEEEeE-EEEee--C--CEE-EEeecCCccCCCCeEEEcCEEEEeCCC
Confidence 3444556777 99999986 55553 2 223 2331 3 568999999999875
No 282
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=23.34 E-value=1.1e+02 Score=28.31 Aligned_cols=39 Identities=18% Similarity=0.198 Sum_probs=29.7
Q ss_pred HHcCcEEEcCceeeEEEecCCCCeEEEEEeCCeEEecCEEEEccCh
Q 018455 173 RTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGI 218 (355)
Q Consensus 173 ~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VV~a~p~ 218 (355)
++.|++++++..|+.|.. + .|.++|+++.+|++|+|+..
T Consensus 146 ~~~gv~~~~~~~v~~i~~----~---~v~~~g~~~~~d~lViATGs 184 (523)
T 1mo9_A 146 EQLNLEYILNCPAKVIDN----H---TVEAAGKVFKAKNLILAVGA 184 (523)
T ss_dssp HTSCCCEEESSCCEEEET----T---EEEETTEEEEBSCEEECCCE
T ss_pred ccCCcEEEEeeEEEEeeC----C---EEEECCEEEEeCEEEECCCC
Confidence 567899987888887752 2 24446788999999999874
No 283
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=21.21 E-value=1.5e+02 Score=26.75 Aligned_cols=47 Identities=15% Similarity=0.254 Sum_probs=31.1
Q ss_pred HHHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CC--eEEecCEEEEccCh
Q 018455 166 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK--ETYSAGAVVLAVGI 218 (355)
Q Consensus 166 ~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g--~~~~ad~VV~a~p~ 218 (355)
+.+...+++.|+++..++.+. .+. +.+ .|.. +| .++.+|+||+|+..
T Consensus 103 ~~~~~~~~~~~v~~~~g~~~~---~~~--~~~-~v~~~~g~~~~~~~d~lvlAtG~ 152 (476)
T 3lad_A 103 GGVASLIKANGVTLFEGHGKL---LAG--KKV-EVTAADGSSQVLDTENVILASGS 152 (476)
T ss_dssp HHHHHHHHHHTCEEEESEEEE---CST--TCE-EEECTTSCEEEECCSCEEECCCE
T ss_pred HHHHHHHHhCCCEEEEeEEEE---ecC--CEE-EEEcCCCceEEEEcCEEEEcCCC
Confidence 334455667789998887554 333 224 4655 45 57899999999875
No 284
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=21.13 E-value=78 Score=28.55 Aligned_cols=35 Identities=14% Similarity=0.171 Sum_probs=22.4
Q ss_pred EcCceeeEEEecCCCCeEEEEEe-CCeE-EecCEEEEccChh
Q 018455 180 LDGRRVTDFIYDEERCCISDVVC-GKET-YSAGAVVLAVGIS 219 (355)
Q Consensus 180 ~l~~~V~~I~~~~~~~~v~~v~~-~g~~-~~ad~VV~a~p~~ 219 (355)
.++..|++|..++ + +|++ +|++ +.+|.||+|+...
T Consensus 255 ~~~~~v~~~~~~~--~---~v~~~dG~~~~~~D~vi~atG~~ 291 (447)
T 2gv8_A 255 QQVPEITKFDPTT--R---EIYLKGGKVLSNIDRVIYCTGYL 291 (447)
T ss_dssp EEECCEEEEETTT--T---EEEETTTEEECCCSEEEECCCBC
T ss_pred EEecCeEEEecCC--C---EEEECCCCEeccCCEEEECCCCC
Confidence 3445666665332 2 3555 6765 6899999999754
No 285
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=20.98 E-value=2.3e+02 Score=25.73 Aligned_cols=47 Identities=15% Similarity=0.106 Sum_probs=30.8
Q ss_pred HHHHHHHHcCcEEEcCceeeEEEecCCCCeEEEEEe-CC--eEEecCEEEEccChh
Q 018455 167 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK--ETYSAGAVVLAVGIS 219 (355)
Q Consensus 167 ~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g--~~~~ad~VV~a~p~~ 219 (355)
.+...+++.|+++..++.+. .+. +.+ .|.+ +| .++.+|+||+|+...
T Consensus 120 ~~~~~~~~~~v~~~~g~~~~---~~~--~~~-~v~~~~g~~~~~~~d~lViATGs~ 169 (491)
T 3urh_A 120 GVSFLFKKNKIDGFQGTGKV---LGQ--GKV-SVTNEKGEEQVLEAKNVVIATGSD 169 (491)
T ss_dssp HHHHHHHHTTCEEEESEEEE---CSS--SEE-EEECTTSCEEEEECSEEEECCCEE
T ss_pred HHHHHHHhCCCEEEEEEEEE---ecC--CEE-EEEeCCCceEEEEeCEEEEccCCC
Confidence 34455667788988887543 233 223 4555 44 579999999998753
No 286
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=20.96 E-value=1e+02 Score=28.05 Aligned_cols=20 Identities=15% Similarity=0.230 Sum_probs=16.2
Q ss_pred EEe-CCeEEecCEEEEccChh
Q 018455 200 VVC-GKETYSAGAVVLAVGIS 219 (355)
Q Consensus 200 v~~-~g~~~~ad~VV~a~p~~ 219 (355)
|.+ +|+++++|.||+|+.-.
T Consensus 255 V~~~dG~~i~~D~Vi~atG~~ 275 (464)
T 2xve_A 255 AYFADGSSEKVDAIILCTGYI 275 (464)
T ss_dssp EEETTSCEEECSEEEECCCBC
T ss_pred EEECCCCEEeCCEEEECCCCC
Confidence 444 78889999999999864
Done!