Query 018458
Match_columns 355
No_of_seqs 155 out of 1344
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 15:35:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018458.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018458hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ryc_A Tubulin alpha chain; al 100.0 3.5E-98 1E-102 735.9 20.5 353 3-355 99-451 (451)
2 3ryc_B Tubulin beta chain; alp 100.0 1E-94 3.5E-99 710.2 19.9 338 3-348 97-434 (445)
3 3cb2_A Gamma-1-tubulin, tubuli 100.0 1.1E-85 3.7E-90 653.7 23.3 337 3-345 100-444 (475)
4 2btq_B Tubulin btubb; structur 100.0 1.4E-83 4.7E-88 633.6 18.3 326 3-339 98-425 (426)
5 2bto_A Tubulin btuba; bacteria 100.0 2.1E-83 7.3E-88 638.2 19.6 336 3-348 101-439 (473)
6 2r75_1 Cell division protein F 100.0 5.4E-39 1.9E-43 306.9 5.9 243 3-285 67-311 (338)
7 2vap_A FTSZ, cell division pro 100.0 1.3E-37 4.5E-42 298.8 8.6 230 3-265 97-327 (364)
8 1w5f_A Cell division protein F 100.0 1.9E-36 6.6E-41 290.2 9.3 231 4-265 82-314 (353)
9 2vxy_A FTSZ, cell division pro 100.0 3.4E-36 1.2E-40 290.5 10.9 232 3-265 71-302 (382)
10 1ofu_A FTSZ, cell division pro 100.0 7.8E-36 2.7E-40 283.3 9.9 242 3-283 71-313 (320)
11 1rq2_A Cell division protein F 100.0 5.8E-36 2E-40 288.9 7.5 242 4-284 72-313 (382)
12 2vaw_A FTSZ, cell division pro 100.0 1.8E-35 6.3E-40 286.4 10.7 244 3-284 71-314 (394)
13 3m89_A FTSZ/tubulin-related pr 100.0 2.1E-30 7E-35 249.7 8.7 224 3-237 105-361 (427)
14 4dxd_A Cell division protein F 99.9 8.6E-29 2.9E-33 236.7 7.6 212 10-241 79-290 (396)
15 3v3t_A Cell division GTPase FT 99.9 1.5E-27 5.1E-32 225.9 7.8 140 10-163 62-207 (360)
16 4ei7_A Plasmid replication pro 99.5 1.3E-14 4.5E-19 140.8 4.8 147 12-165 87-245 (389)
17 3r4v_A Putative uncharacterize 98.7 1.3E-08 4.6E-13 93.1 6.1 120 8-142 56-175 (315)
18 2e4h_B Tubulin alpha-ubiquitou 97.8 1.6E-05 5.6E-10 49.9 3.5 36 320-355 1-36 (36)
19 3g7n_A Lipase; hydrolase fold, 69.9 3.5 0.00012 37.0 3.9 61 9-73 97-157 (258)
20 3bed_A PTS system, IIA compone 64.0 4.6 0.00016 32.7 3.1 31 19-50 45-75 (142)
21 3uue_A LIP1, secretory lipase 59.9 5.9 0.0002 35.9 3.4 60 10-73 112-171 (279)
22 1pdo_A Mannose permease; phosp 55.8 8.6 0.00029 30.7 3.4 32 19-50 41-72 (135)
23 3lfh_A Manxa, phosphotransfera 53.8 8.5 0.00029 31.3 3.0 39 19-57 43-82 (144)
24 3gx1_A LIN1832 protein; APC633 52.8 15 0.00053 29.1 4.4 39 19-59 44-82 (130)
25 3ipr_A PTS system, IIA compone 47.3 13 0.00045 30.2 3.2 39 19-57 41-79 (150)
26 2aot_A HMT, histamine N-methyl 46.3 43 0.0015 29.7 6.9 61 18-79 32-92 (292)
27 2nx2_A Hypothetical protein YP 45.9 45 0.0015 28.0 6.5 111 19-145 25-137 (181)
28 3o0d_A YALI0A20350P, triacylgl 45.2 13 0.00044 34.1 3.1 56 9-68 127-182 (301)
29 3gdw_A Sigma-54 interaction do 42.3 25 0.00084 28.3 4.1 39 19-59 44-84 (139)
30 1tia_A Lipase; hydrolase(carbo 41.6 20 0.00067 32.2 3.8 51 9-63 110-160 (279)
31 3mtq_A Putative phosphoenolpyr 41.0 10 0.00035 31.4 1.6 32 20-51 61-92 (159)
32 4id9_A Short-chain dehydrogena 32.8 45 0.0016 30.0 4.8 61 45-108 24-84 (347)
33 3ngm_A Extracellular lipase; s 32.1 31 0.0011 31.8 3.5 53 9-65 109-161 (319)
34 2p10_A MLL9387 protein; putati 31.1 21 0.00071 32.5 2.0 34 19-60 13-46 (286)
35 1uwc_A Feruloyl esterase A; hy 31.0 29 0.00098 30.8 3.0 51 9-63 98-148 (261)
36 2him_A L-asparaginase 1; hydro 29.7 1.2E+02 0.004 28.4 7.1 93 15-115 84-177 (358)
37 3b48_A Uncharacterized protein 29.5 18 0.00063 28.8 1.3 28 21-49 49-76 (135)
38 3o38_A Short chain dehydrogena 28.9 25 0.00084 30.7 2.2 20 45-64 27-46 (266)
39 2wlt_A L-asparaginase; hydrola 28.2 1.3E+02 0.0044 27.7 7.0 72 16-92 67-139 (332)
40 1wsa_A Asparaginase, asparagin 28.2 1.3E+02 0.0045 27.6 7.1 72 16-92 65-137 (330)
41 3p9c_A Caffeic acid O-methyltr 27.9 97 0.0033 28.6 6.3 40 26-70 189-228 (364)
42 2jl1_A Triphenylmethane reduct 27.9 57 0.002 28.3 4.5 28 45-73 5-32 (287)
43 3reo_A (ISO)eugenol O-methyltr 27.5 1E+02 0.0034 28.5 6.3 42 26-72 191-232 (368)
44 1o7j_A L-asparaginase; atomic 27.3 1.4E+02 0.0047 27.5 7.1 72 16-92 67-139 (327)
45 3ct6_A PTS-dependent dihydroxy 26.6 31 0.0011 27.3 2.2 27 21-49 44-70 (131)
46 1agx_A Glutaminase-asparaginas 26.5 1.3E+02 0.0044 27.7 6.7 94 16-115 64-159 (331)
47 3ajr_A NDP-sugar epimerase; L- 25.7 87 0.003 27.6 5.3 29 45-74 4-32 (317)
48 1zq1_A Glutamyl-tRNA(Gln) amid 24.8 1.3E+02 0.0046 28.8 6.7 73 15-92 150-223 (438)
49 3mgg_A Methyltransferase; NYSG 24.4 67 0.0023 27.8 4.2 62 3-69 2-63 (276)
50 1tgl_A Triacyl-glycerol acylhy 24.2 57 0.0019 28.8 3.7 49 9-61 109-157 (269)
51 2zcu_A Uncharacterized oxidore 24.1 68 0.0023 27.8 4.2 28 45-73 4-31 (286)
52 1lgy_A Lipase, triacylglycerol 23.4 22 0.00074 31.8 0.7 49 9-61 110-158 (269)
53 3ff5_A PEX14P, peroxisomal bio 23.0 20 0.00068 24.1 0.3 22 304-328 32-53 (54)
54 1k2d_P MBP peptide, myelin bas 23.0 21 0.00072 19.4 0.3 8 48-55 16-23 (26)
55 1tib_A Lipase; hydrolase(carbo 22.3 46 0.0016 29.5 2.7 51 9-63 111-161 (269)
56 3pdk_A Phosphoglucosamine muta 22.2 3.3E+02 0.011 26.1 9.0 44 17-62 175-218 (469)
57 2plg_A TLL0839 protein; hypoth 20.5 60 0.0021 26.9 2.8 34 312-345 121-154 (163)
58 2yy7_A L-threonine dehydrogena 20.3 54 0.0018 28.9 2.7 29 45-74 7-35 (312)
59 2d6f_A Glutamyl-tRNA(Gln) amid 20.2 1.9E+02 0.0064 27.8 6.6 72 15-92 149-221 (435)
No 1
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=100.00 E-value=3.5e-98 Score=735.88 Aligned_cols=353 Identities=80% Similarity=1.313 Sum_probs=334.2
Q ss_pred CCCCcccCcccchHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEeeeecCCCCCC
Q 018458 3 EYSKLCCDDVSVGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVS 82 (355)
Q Consensus 3 ~~~n~a~G~~~~g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~~v~P~~~~~ 82 (355)
.+||||+|||+.|+++.|+++|+|||++|+||++|||+++||+|||||||+|+.|+|.|+++||++.+++++|+|++..+
T Consensus 99 AgNNwA~G~yt~G~e~~d~v~d~IRk~~E~cD~lqGF~i~hSlgGGTGSG~gs~lle~L~~ey~kk~~~~~~v~P~~~~s 178 (451)
T 3ryc_A 99 AANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVS 178 (451)
T ss_dssp CTTCHHHHHHTSHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSHHHHHHHHHHHHHHHHHTTTCEEEEEEEECCTTTC
T ss_pred ccCCCCeeecccchHhHHHHHHHHHHHHHcCCCccceEEEeccCCCCCccHHHHHHHHHHHhcCcceEEEEEEecCCCcc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999998778
Q ss_pred ccccchhhhHHhhhhhhhccceeeEechhHHHHHhhhccCCCCCCcchhhHHHHHHhhcCCceeecCCCCccchhhhhcc
Q 018458 83 TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTN 162 (355)
Q Consensus 83 ~~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~~~t~~~r~~~~~~~~l~~l~~~ 162 (355)
++++++||++|++++|.+++|+++++||++|+++|.+.+++..|+|.++|++||++|+++|.++||+|++|.||.++.+|
T Consensus 179 ~~vvepYNa~Lsl~~L~e~sD~~~~idNeaL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT~slRf~G~lN~Dl~~l~tn 258 (451)
T 3ryc_A 179 TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTN 258 (451)
T ss_dssp CCTTHHHHHHHHHHHHGGGCSEEEEEEHHHHHHHHHHHHCCSSCCHHHHHHHHHHHHHHHHHHHHTTCSSSCSHHHHHHH
T ss_pred cccceehHHHHHHHHHHhcccceeEeccHHHHHHHHHhccCCCCCchhhHHHHHhcccccccccccCcccccCHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcccccccccccccchhhhhccccCHHHHHHhhcCCCCCCcccCCCCCccccccccccCcCChhhHHHHHHhhhcc
Q 018458 163 LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK 242 (355)
Q Consensus 163 L~p~P~~~fl~~~~~Pl~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ls~~~~~RG~~~~~~~~~~~~~~~~~ 242 (355)
|||||++||++++|+|+++.....++++++.+|++++|+++|+|.+|+|++|+|+++++++||+++++++.+++.++|.|
T Consensus 259 LVP~PrlHF~~~s~aPl~s~~~~~~~~~sv~elt~~~f~~~n~m~~~dp~~gky~a~~~~~RG~v~~~dv~~~i~~ik~k 338 (451)
T 3ryc_A 259 LVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTK 338 (451)
T ss_dssp HCSSSSCCCCEEEEECCCBSSSCCCCCCCHHHHHHHTTCGGGBSSCCCGGGSCEEEEEEEEEESCCHHHHHHHHHHHHHH
T ss_pred cCCCCceeeeccccCccccccccccccCCHHHHHHHHhccccceEecCCCCCchheehhhcccCCCHHHHHHHHHHHhhc
Confidence 99999999999999999998888889999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCceeeeecCCCccCCCCCcccceeeeeeccCchhHHHHHHHHHHHHHHhhcccceeeecccCCCchhhH
Q 018458 243 RTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEF 322 (355)
Q Consensus 243 ~~~~f~~w~p~~~~~~~~~~~p~~~~~~~~~~~~~s~~~l~N~t~i~~~l~~i~~~~~~m~~~kAylH~Y~~~Gmee~eF 322 (355)
++++|++|+|++||+++|.+||.++|++++++.+++++||+|+|+|.+.|+++.+||++||+||||||||++|||||+||
T Consensus 339 ~~~~Fv~W~p~~~kv~i~~~pP~~~p~~~la~~~~s~~~lsNsTaI~~~f~rl~~kFd~m~~krAFvHwY~~eGmee~eF 418 (451)
T 3ryc_A 339 RSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEF 418 (451)
T ss_dssp CCCCBCTTSCEEEEEEEECSCCCCCTTSSBCCCSEEEEEEEEEGGGHHHHHHHHHHHHHHHTTTTTTHHHHTTTCCHHHH
T ss_pred CCcceEEEccCceeeeeeccCCccCCCccccccceeeEEecCchHHHHHHHHHHHHHHHHhhcceeHhhhcCCccchhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHcccCCCCCCCCCCCCC
Q 018458 323 SEAREDLAALEKDYEEVGAESAEGEDGDEGDEY 355 (355)
Q Consensus 323 ~ea~~~l~~l~~~Y~~~~~~~~~~~~~~~~~~~ 355 (355)
.||+++|.+|+++|++++.++.|+++||+++||
T Consensus 419 ~EA~e~l~~L~~eY~~~~~~~~~~~~~~~~~~~ 451 (451)
T 3ryc_A 419 SEAREDMAALEKDYEEVGVDSVEGEGEEEGEEY 451 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHCC-------------
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcccccccccCC
Confidence 999999999999999999988776666667765
No 2
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=100.00 E-value=1e-94 Score=710.21 Aligned_cols=338 Identities=40% Similarity=0.777 Sum_probs=326.7
Q ss_pred CCCCcccCcccchHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEeeeecCCCCCC
Q 018458 3 EYSKLCCDDVSVGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVS 82 (355)
Q Consensus 3 ~~~n~a~G~~~~g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~~v~P~~~~~ 82 (355)
.+||||+|||+.|+++.++++|+|||++|+||++|||+++||+|||||||+|+.|+|.|+++||++.+++++|+|++..+
T Consensus 97 AgNN~A~G~yt~G~e~~d~v~d~IRk~~E~cd~lqGf~i~hSlgGGTGSG~gs~lle~L~~ey~kk~~~~~sV~Psp~~s 176 (445)
T 3ryc_B 97 AGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVS 176 (445)
T ss_dssp CTTCHHHHHHSHHHHHHHHHHHHHHHHHHTCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHCTTSEEEEEEEECCGGGC
T ss_pred ccCCccccchhhhHHHHHHHHHHHHHHHHcCCccceEEEEeecCCCCCCcHHHHHHHHHHHHcCccccceEEEEeCCccc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999998778
Q ss_pred ccccchhhhHHhhhhhhhccceeeEechhHHHHHhhhccCCCCCCcchhhHHHHHHhhcCCceeecCCCCccchhhhhcc
Q 018458 83 TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTN 162 (355)
Q Consensus 83 ~~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~~~t~~~r~~~~~~~~l~~l~~~ 162 (355)
+++++|||++|++++|.+++|+++++||++|+++|.+.+++..|+|.++|++||++|+++|+++||||++|.||.++.+|
T Consensus 177 ~~vvepYNa~Lsl~~L~e~sD~~~~iDNeaL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT~slRf~G~lN~Dl~~l~tn 256 (445)
T 3ryc_B 177 DTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVN 256 (445)
T ss_dssp SCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHHHHHSCCSSSCSHHHHHHH
T ss_pred cccccchhhhhhHhhhhcccceeEeecchhHHHHHHhccCCCCCcchhhHHHHHhcchhhccccccCcccccCHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcccccccccccccchhhhhccccCHHHHHHhhcCCCCCCcccCCCCCccccccccccCcCChhhHHHHHHhhhcc
Q 018458 163 LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK 242 (355)
Q Consensus 163 L~p~P~~~fl~~~~~Pl~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ls~~~~~RG~~~~~~~~~~~~~~~~~ 242 (355)
|||||++||++++++|+++.....++++++.+|++++|+++|+|.+|+|++|+|+++++++||+++++++.+++.++|.|
T Consensus 257 LVP~PrlhF~~~s~aP~~s~~~~~~~~~sv~elt~~~f~~~n~m~~~dp~~gky~a~~~~~RG~v~~kdv~~~i~~ik~k 336 (445)
T 3ryc_B 257 MVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMLNIQNK 336 (445)
T ss_dssp HCSSTTCCEEEEEEESCCCTTCCCCCCCCHHHHHHHTTSGGGBSSSCCGGGSCEEEEEEEEEESCCHHHHHHHHHHHHHH
T ss_pred ccCCCceeeeccccCcccccchhhhccCCHHHHHHHHHhhcCCeeecCCCCCcceeeeeeeecCCChHHHHHHHHHHHhh
Confidence 99999999999999999998888889999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCceeeeecCCCccCCCCCcccceeeeeeccCchhHHHHHHHHHHHHHHhhcccceeeecccCCCchhhH
Q 018458 243 RTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEF 322 (355)
Q Consensus 243 ~~~~f~~w~p~~~~~~~~~~~p~~~~~~~~~~~~~s~~~l~N~t~i~~~l~~i~~~~~~m~~~kAylH~Y~~~Gmee~eF 322 (355)
++++|++|+|++||+++|.+||. +.+++++||+|+|+|.+.|+++.+||++||+||||||||++|||||+||
T Consensus 337 ~~~~Fv~W~p~~~k~~i~~~pp~--------~~~~s~~~lsNsTaI~~~~~rl~~kFd~m~~krAFvHwY~~eGmee~eF 408 (445)
T 3ryc_B 337 NSSYFVEWIPNNVKTAVCDIPPR--------GLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEF 408 (445)
T ss_dssp TGGGBCTTSTTCEEEEEESSCCT--------TCSEEEEEEEEEGGGHHHHHHHHHHHHHHHTTTTTTHHHHTTTCCHHHH
T ss_pred CcccCcccCCCceeeeeeccCCc--------ccceeeeeecCcHHHHHHHHHHHHHHHhhhhcccchhhhhccCCcHHHH
Confidence 99999999999999999999987 4568999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHcccCCCCCC
Q 018458 323 SEAREDLAALEKDYEEVGAESAEGED 348 (355)
Q Consensus 323 ~ea~~~l~~l~~~Y~~~~~~~~~~~~ 348 (355)
.||+++|++|+++|++++.++.++++
T Consensus 409 ~EA~e~l~~L~~eY~~~~~~~~~~~~ 434 (445)
T 3ryc_B 409 TEAESNMNDLVSEYQQYQDATADEQG 434 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTC--
T ss_pred HHHHHHHHHHHHHHHHHHhccCCccc
Confidence 99999999999999999988776543
No 3
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*
Probab=100.00 E-value=1.1e-85 Score=653.72 Aligned_cols=337 Identities=29% Similarity=0.546 Sum_probs=315.3
Q ss_pred CCCCcccCcccchHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEeeeecCCCC-C
Q 018458 3 EYSKLCCDDVSVGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ-V 81 (355)
Q Consensus 3 ~~~n~a~G~~~~g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~~v~P~~~-~ 81 (355)
.++|||+| |+.|++..|+++|+||+++|+||.+|||+++||+|||||||+|+.|+|.|+|+||++.+++++|+|++. .
T Consensus 100 Agnn~a~G-~~~g~e~~d~~~d~Ir~~~E~cD~lqgf~i~~slGGGTGSG~~s~l~e~l~dey~~k~~lt~~V~P~~~e~ 178 (475)
T 3cb2_A 100 AGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEM 178 (475)
T ss_dssp CTTCHHHH-HHHHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSSHHHHHHHHHHHHHHHHSTTSEEEEEEEECCTTSC
T ss_pred CCCCchhh-hhhhHhhHHHHHHHHHHHHhcCCCcceeEEeccCCCCCCcChHHHHHHHHHHHcCCCceEEEEEECCcccc
Confidence 57999999 478999999999999999999999999999999999999999999999999999999999999999985 5
Q ss_pred CccccchhhhHHhhhhhhhccceeeEechhHHHHHhhhccCCCCCCcchhhHHHHHHhhcCCceeecCCCCccchhhhhc
Q 018458 82 STSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 161 (355)
Q Consensus 82 ~~~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~~~t~~~r~~~~~~~~l~~l~~ 161 (355)
++.++++||++|++++|.+++|++|++||++|+++|.+.+++..|+|.++|++||++|+++|.++||||.+|.|+.++.+
T Consensus 179 se~vv~~yNa~lsl~~L~e~sD~~i~idNeaL~~i~~~~l~i~~p~f~~~N~lia~~vs~iT~~lr~pG~lN~Dl~d~~t 258 (475)
T 3cb2_A 179 SDVVVQPYNSLLTLKRLTQNADCLVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIA 258 (475)
T ss_dssp CSCTTHHHHHHHHHHHHHHSCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHTTTTSSSSCTTCSHHHHHH
T ss_pred ccceeehhHhHHHHHHHHhhCCEEEEeccHHHHHHHhhcCCCCcchHHHHHHHHhhhccccccccccCCcccchhhhhcc
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCcccccccccccccchhh-hhccccCHHHHHHhhcCCCCCCcccCCC---CCccccccccccCcCChhhHHHHHH
Q 018458 162 NLVPYPRIHFMLSSYAPVISAEK-AFHEQLSVAEITNSAFEPSSMMAKCDPR---HGKYMACCLMYRGDVVPKDVNAAVA 237 (355)
Q Consensus 162 ~L~p~P~~~fl~~~~~Pl~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~~~~ls~~~~~RG~~~~~~~~~~~~ 237 (355)
+|||||++||++++++|+++... ..+++.+|.+|++++|+++|+|.+|+|+ +|+|+|+++++||++.++++.+++.
T Consensus 259 nLvP~PrlhFl~~s~aP~~s~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~~~~gkyla~~~~~RG~v~~~dv~~~i~ 338 (475)
T 3cb2_A 259 SLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQ 338 (475)
T ss_dssp HHCSSTTCCEEEEEEECCC------CCSCCCHHHHHHHTTSGGGBSSCCCCC--CCCCEEEEEEEEESSCCHHHHHHHHH
T ss_pred eeecccceeEeecccccccccccccccccCCHHHHHHHHhccccceEecCcccccccchhhhHHhhcCCCCHHHHHHHHH
Confidence 99999999999999999998776 6788999999999999999999999999 9999999999999999999999999
Q ss_pred hhhccCccccccCCCCCceeeeecCCCccCCCCCcccceeeeeeccCchhHHHHHHHHHHHHHHhhcccceeeecccCCC
Q 018458 238 TIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGM 317 (355)
Q Consensus 238 ~~~~~~~~~f~~w~p~~~~~~~~~~~p~~~~~~~~~~~~~s~~~l~N~t~i~~~l~~i~~~~~~m~~~kAylH~Y~~~Gm 317 (355)
++|.+++++|++|+|+++|+++|.+||.++| +.+.+++||+|+|+|.+.|+++.+||++||+||||||||++|||
T Consensus 339 ~ik~k~~~~fv~W~p~~~k~~i~~~~p~~~~-----~~~~s~~~lsN~TaI~~~f~ri~~kfd~m~~rrAflHwY~~eGm 413 (475)
T 3cb2_A 339 RIRERKLANFIPWGPASIQVALSRKSPYLPS-----AHRVSGLMMANHTSISSLFERTCRQYDKLRKREAFLEQFRKEDM 413 (475)
T ss_dssp HHHHTTCSCBCTTSCCCEEEEEECCCCC----------CCEEEEEEEEGGGHHHHHHHHHHHHHHHHTTCSCHHHHTSGG
T ss_pred HhhcccCCccceecCCCceeeeeccCCccCC-----CcceEEEEecCChHHHHHHHHHHHHHHHHhhcccceeeecccCc
Confidence 9999999999999999999999999998765 34578999999999999999999999999999999999999999
Q ss_pred ch---hhHHHHHHhHHHHHHHHHHHcccCCC
Q 018458 318 EE---GEFSEAREDLAALEKDYEEVGAESAE 345 (355)
Q Consensus 318 ee---~eF~ea~~~l~~l~~~Y~~~~~~~~~ 345 (355)
|| +||.||+++|++|+++|++++.+...
T Consensus 414 ~e~~~~eF~EA~~~l~~li~eY~~~~~~~~~ 444 (475)
T 3cb2_A 414 FKDNFDEMDTSREIVQQLIDEYHAATRPDYI 444 (475)
T ss_dssp GSSCCHHHHHHHHHHHHHHHHHHHTTSGGGS
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 87 99999999999999999998755443
No 4
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=100.00 E-value=1.4e-83 Score=633.64 Aligned_cols=326 Identities=37% Similarity=0.696 Sum_probs=300.8
Q ss_pred CCCCcccCcccchHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEeeeecCCCCCC
Q 018458 3 EYSKLCCDDVSVGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVS 82 (355)
Q Consensus 3 ~~~n~a~G~~~~g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~~v~P~~~~~ 82 (355)
.++|||+|||+.|+++.++++|+||+++|+||.+|||+++||+|||||||+|+.|+|.|+|+||++.+++++|+|.+..+
T Consensus 98 Agnn~a~G~~~~G~~~~e~~~d~Ir~~~e~cD~lqgf~i~~s~gGGTGSG~~~~l~e~l~~~y~~~~~lt~~V~p~p~~~ 177 (426)
T 2btq_B 98 AANNWARGYNVEGEKVIDQIMNVIDSAVEKTKGLQGFLMTHSIGGGSGSGLGSLILERLRQAYPKKRIFTFSVVPSPLIS 177 (426)
T ss_dssp CTTCHHHHHTHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEEESSSSTTTHHHHHHHHHHHTTCTTSEEEEEEEECCGGGC
T ss_pred ccCcccccccchhHHHHHHHHHHHHHHHhcCCCcceEEEEEecCCCccccHHHHHHHHHHHHcCcCceEEEEEecCCccc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999998767
Q ss_pred ccccchhhhHHhhhhhhhccceeeEechhHHHHHhhhccCCCCCCcchhhHHHHHHhhcCCceeecCCCCccchhhhhcc
Q 018458 83 TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTN 162 (355)
Q Consensus 83 ~~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~~~t~~~r~~~~~~~~l~~l~~~ 162 (355)
+.++++||+++++++|.+++|++|++||++|.++|.+.++ ..++|.++|++||++|+++|.++||||.+|.|+.|+.++
T Consensus 178 e~~~~~yNa~lsl~~L~e~~D~~i~idN~al~~i~~~~l~-~~~~f~~~N~lia~~v~~it~~lr~~g~lN~D~~d~~t~ 256 (426)
T 2btq_B 178 DSAVEPYNAILTLQRILDNADGAVLLDNEALFRIAKAKLN-RSPNYMDLNNIIALIVSSVTASLRFPGKLNTDLSEFVTN 256 (426)
T ss_dssp CCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHHSS-SCCCHHHHHHHHHHHHHHHHHHHHSSCSSSCSHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHhCCcceeeccHHHHHHHhccCC-CCcHHHHHHHHHHhhhcchhhhccCCCcccCCHHHHHHH
Confidence 8999999999999999999999999999999999999898 779999999999999999999999999999999999999
Q ss_pred ccCCCcccccccccccccchhhhhccccCHHHHHHhhcCCCCCCcccCCCCCccccccccccCcCChhhHHHHHHhhhcc
Q 018458 163 LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK 242 (355)
Q Consensus 163 L~p~P~~~fl~~~~~Pl~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ls~~~~~RG~~~~~~~~~~~~~~~~~ 242 (355)
|+|||++||++++++|+++.....+++.+|.++++++|+++++|..|+|++|+|+|+++++||+++++++.+++..+ |
T Consensus 257 lvP~P~~hf~~~~~aP~~~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~g~yla~~~i~rG~v~~~~v~~~~~~i--k 334 (426)
T 2btq_B 257 LVPFPGNHFLTASFAPMRGAGQEGQVRTNFPDLARETFAQDNFTAAIDWQQGVYLAASALFRGDVKAKDVDENMATI--R 334 (426)
T ss_dssp HCSSTTCCEEEEECSCC-----------CCHHHHHHHTCGGGBSSCCCTTTCCEEEEEEEEECC----CTTTTHHHH--H
T ss_pred HhhCCCCceeeccccccccchhhccccCCHHHHhhhhcCccceeEecCCCCchHHHHHHHHcCCCCHHHHHHHHHHH--h
Confidence 99999999999999999988777788999999999999999999999999999999999999999999999888887 6
Q ss_pred CccccccCCC--CCceeeeecCCCccCCCCCcccceeeeeeccCchhHHHHHHHHHHHHHHhhcccceeeecccCCCchh
Q 018458 243 RTIQFVDWCP--TGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEG 320 (355)
Q Consensus 243 ~~~~f~~w~p--~~~~~~~~~~~p~~~~~~~~~~~~~s~~~l~N~t~i~~~l~~i~~~~~~m~~~kAylH~Y~~~Gmee~ 320 (355)
+.++|++|+| +++|+++|.+||. +.+.++++|+|+|+|.+.|+++.++|++||+||||||||++|||||+
T Consensus 335 ~~~~fv~W~p~~~~~k~~i~~~~p~--------~~~~s~~~lsNstaI~~~~~~~~~~f~~m~~rrAflh~Y~~eGmee~ 406 (426)
T 2btq_B 335 KSLNYASYMPASGGLKLGYAETAPE--------GFASSGLALVNHTGIAAVFERLIAQFDIMFDNHAYTHWYENAGVSRD 406 (426)
T ss_dssp TTSCBCTTSCSSCSEEEEEESCCCT--------TCSSBCCEEEEEGGGHHHHHHHHHHHHHHHHTTSSHHHHHTTTCCHH
T ss_pred cCCCCcccCCCCCceeeeeeccCCC--------CCcceeEEecCChHHHHHHHHHHHHHHHHhhcccchhhhccCCccHH
Confidence 6789999999 9999999999986 34568999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhHHHHHHHHHHH
Q 018458 321 EFSEAREDLAALEKDYEEV 339 (355)
Q Consensus 321 eF~ea~~~l~~l~~~Y~~~ 339 (355)
||.||+++|++|+++|+++
T Consensus 407 eF~ea~~~l~~l~~eY~~~ 425 (426)
T 2btq_B 407 MMAKARNQIATLAQSYRDA 425 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999986
No 5
>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*
Probab=100.00 E-value=2.1e-83 Score=638.21 Aligned_cols=336 Identities=35% Similarity=0.705 Sum_probs=304.8
Q ss_pred CCCCcccCcccchHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEeeeecCCCCCC
Q 018458 3 EYSKLCCDDVSVGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVS 82 (355)
Q Consensus 3 ~~~n~a~G~~~~g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~~v~P~~~~~ 82 (355)
.++|||+|||+.|+++.++++|+||+++|+||.+|||+++||+|||||||+|+.|+|.|+|+||++.+++++|+|++..+
T Consensus 101 Agnn~a~G~~~~G~~~~ee~~d~Ir~~~e~cD~lqgf~i~~slgGGTGSG~~~~l~e~l~e~y~~~~ilt~~V~P~~~~~ 180 (473)
T 2bto_A 101 AGGNFAVGYLGAGREVLPEVMSRLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIESLKEKYGEIPVLSCAVLPSPQVS 180 (473)
T ss_dssp CTTCHHHHHTSHHHHHHHHHHHHHHHHHHHCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHTCSSCEEEEEEECCCCSS
T ss_pred CCCCcCCCcchhhHHHHHHHHHHHHHHHHhCCCcceEEEEeeCCCCCCcchHHHHHHHHHHHcCCCceEEEEEecCCccc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999998778
Q ss_pred ccccchhhhHHhhhhhhhccceeeEechhHHHHHhhhccCCCCCCcchhhHHHHHHhhcCCceeecCCCCccc--hhhhh
Q 018458 83 TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVD--VTEFQ 160 (355)
Q Consensus 83 ~~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~~~t~~~r~~~~~~~~--l~~l~ 160 (355)
+.++++||++|++++|.+++|++|++||++|+++|.+.+++..++|.++|++||++|+++|.++||||.+|.| +.++.
T Consensus 181 e~~v~~yNa~lsl~~L~e~~D~~i~idNeaL~~i~~~~l~i~~~~f~~~N~lia~~v~~it~~lr~~g~lN~D~~l~d~~ 260 (473)
T 2bto_A 181 SVVTEPYNTVFALNTLRRSADACLIFDNEALFDLAHRKWNIESPTVDDLNLLITEALAGITASMRFSGFLTVEISLRELL 260 (473)
T ss_dssp CEESHHHHHHHHHHHHHHTCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHHHHHC------CCCHHHHH
T ss_pred cchhhHHHHHHHHHHHHhhCCeEEEeccHHHHHHhccccccCcchHHHHHHHHhhhcccchhhcccCCcccCCccHHhhh
Confidence 9999999999999999999999999999999999999999988999999999999999999999999999999 99999
Q ss_pred ccccCCCcccccccccccccchhhhhccccCHHHHHHhhcCCCCCCcccCCCCCccccccccccCcCChhhH-HHHHHhh
Q 018458 161 TNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDV-NAAVATI 239 (355)
Q Consensus 161 ~~L~p~P~~~fl~~~~~Pl~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ls~~~~~RG~~~~~~~-~~~~~~~ 239 (355)
++|||||++||++++++|+++.....+++.++.++++++|+++++|..|+|+.++|+++++++||+++++++ .+++..+
T Consensus 261 t~LvP~Prlhf~~~~~aPl~s~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~gkyla~~~i~RG~v~~~dv~~~~i~~i 340 (473)
T 2bto_A 261 TNLVPQPSLHFLMCAFAPLTPPDRSKFEELGIEEMIKSLFDNGSVFAACSPMEGRFLSTAVLYRGIMEDKPLADAALAAM 340 (473)
T ss_dssp HHHCSSTTCCEEEEEEECCCCCC-----CCCHHHHHHHHTSGGGBSSSSCGGGSCEEEEEEEEEEC----CCHHHHHHHH
T ss_pred hheeecCCcceeeeccccccccchhccccCCHHHHHhhhcccccceeecCCCCchHHHHHHhhcCCCChHHhhHHHHHHH
Confidence 999999999999999999998877778899999999999999999999999999999999999999999999 9999999
Q ss_pred hccCccccccCCCCCceeeeecCCCccCCCCCcccceeeeeeccCchhHHHHHHHHHHHHHHhhcccceeeecccCCCch
Q 018458 240 KTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 319 (355)
Q Consensus 240 ~~~~~~~f~~w~p~~~~~~~~~~~p~~~~~~~~~~~~~s~~~l~N~t~i~~~l~~i~~~~~~m~~~kAylH~Y~~~Gmee 319 (355)
+.++.++| |+|+++|+++|.+||. +.++++++|+|+|+|.+.|+++.+||++||+||||||||+++||||
T Consensus 341 k~k~~~~F--W~p~~~kv~i~~~pp~--------g~~~s~~~lsNsTaI~~~~~~l~~kf~~m~~rrAflH~Y~~eGmee 410 (473)
T 2bto_A 341 REKLPLTY--WIPTAFKIGYVEQPGI--------SHRKSMVLLANNTEIARVLDRICHNFDKLWQRKAFANWYLNEGMSE 410 (473)
T ss_dssp HTTSCBCS--SSCCCEEEEEESSCCS--------SCSEEEEEEEEETTHHHHHHHHHHHHHHHHTTTTTHHHHHTTTCCH
T ss_pred Hhhcccce--ecCCcceecccccCCc--------CcceeEEEecCCchHHHHHHHHHHHHHHHhhhcchhHHhhccCCcH
Confidence 98888888 9999999999999986 4568999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhHHHHHHHHHHHcccCCCCCC
Q 018458 320 GEFSEAREDLAALEKDYEEVGAESAEGED 348 (355)
Q Consensus 320 ~eF~ea~~~l~~l~~~Y~~~~~~~~~~~~ 348 (355)
+||.||+++|++|+++|++++.+..|++.
T Consensus 411 ~eF~EA~e~l~~l~~eY~~~~~~~~~~~~ 439 (473)
T 2bto_A 411 EQINVLRASAQELVQSYQVAEESGAKAKV 439 (473)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 99999999999999999999866554443
No 6
>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1*
Probab=100.00 E-value=5.4e-39 Score=306.94 Aligned_cols=243 Identities=16% Similarity=0.226 Sum_probs=209.9
Q ss_pred CCCCcccCcccchHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEeeeecCCCCCC
Q 018458 3 EYSKLCCDDVSVGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVS 82 (355)
Q Consensus 3 ~~~n~a~G~~~~g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~~v~P~~~~~ 82 (355)
-++|||.| +++.++++|+||+++|.||.+ +++||+|||||||+++. ++.|+++|| +++++|+|.+...
T Consensus 67 AGnn~a~G-----~~~~ee~~d~Ir~~~e~~D~l---~i~~s~GGGTGSG~~~~-ia~l~~e~g---~lt~~Vv~~P~~~ 134 (338)
T 2r75_1 67 AGAKPEVG-----EEAALEDIDKIKEILRDTDMV---FISAGLGGGTGTGAAPV-IAKTAKEMG---ILTVAVATLPFRF 134 (338)
T ss_dssp CTTCHHHH-----HHHHHHTHHHHHHHHSSCSEE---EEEEETTSSHHHHHHHH-HHHHHHHTT---CEEEEEEEECCGG
T ss_pred CCCChHHH-----HHHHHHHHHHHHHHHccCCee---EEecccCCCcCCCchHH-HHHHHHhcC---CCEEEEeCCCccc
Confidence 37888855 799999999999999999987 99999999999999999 777888897 5777888777667
Q ss_pred ccccchhhhHHhhhhhhhccceeeEechhHHHHHhhhccCCCCCCcchhhHHHHHHhhcCCceeecCCCCccchhhhhcc
Q 018458 83 TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTN 162 (355)
Q Consensus 83 ~~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~~~t~~~r~~~~~~~~l~~l~~~ 162 (355)
+.++++||+.+++++|.+++|++|++||++|+++|.+.+++. ++|.++|++|++.++++|.++||||.+|.|+.|+.++
T Consensus 135 eg~~~~ynA~~~l~~L~e~~D~~ividNe~L~~i~~~~l~i~-~af~~~N~~i~~~v~~it~~ir~pG~iNvD~~dv~t~ 213 (338)
T 2r75_1 135 EGPRKMEKALKGLEKLKESSDAYIVIHNDKIKELSNRTLTIK-DAFKEVDSVLSKAVRGITSIVVTPAVINVDFADVRTT 213 (338)
T ss_dssp GCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHHTSCCCSSHH-HHHHHHHHHHHHHHHHHHHHHHSCCSBCCCHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHhcCCeEEEeccHHHHhhhhccCChH-HHHHHHHHHHHHHHhhhhhhhccCCceeCCHHHhhhh
Confidence 889999999999999999999999999999999999888887 8999999999999999999999999999999999999
Q ss_pred ccCCCcccccccccccccchhhhhccccCHHHHHHhhcCCCCCCcccCCCCCccccccccccC--cCChhhHHHHHHhhh
Q 018458 163 LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRG--DVVPKDVNAAVATIK 240 (355)
Q Consensus 163 L~p~P~~~fl~~~~~Pl~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ls~~~~~RG--~~~~~~~~~~~~~~~ 240 (355)
|+|+ +++|+..+++|-. .........++.+.+|+ .|++..|++ +++.+|| +++++++.+++..++
T Consensus 214 L~~~-g~a~~g~g~a~g~----~r~~~a~~~ai~s~lle-~n~~~~a~~-------~l~~i~G~~dl~~~ev~~a~~~I~ 280 (338)
T 2r75_1 214 LEEG-GLSIIGMGEGRGD----EKADIAVEKAVTSPLLE-GNTIEGARR-------LLVTIWTSEDIPYDIVDEVMERIH 280 (338)
T ss_dssp HTTC-EEEEEEEEEEEST----THHHHHHHHHHHCBSSB-SSCGGGCSE-------EEEEEEECTTSCTTHHHHHHHHHH
T ss_pred eeCC-ccceeeeccCCcc----chHHHHHHHHHHhhhhc-ccchhhhhe-------EEEEEEcCCCCCHHHHHHHHHHHH
Confidence 9999 8999988888721 11223345778888888 667776654 7888999 889999999988887
Q ss_pred ccCccccccCCCCCceeeeecCCCccCCCCCcccceeeeeeccCc
Q 018458 241 TKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNS 285 (355)
Q Consensus 241 ~~~~~~f~~w~p~~~~~~~~~~~p~~~~~~~~~~~~~s~~~l~N~ 285 (355)
.+. + .|.+++++++..||. +.+.++|+++|.
T Consensus 281 ~~~-----~-~~~~i~~G~~~~~~~--------~~~~~vtviatg 311 (338)
T 2r75_1 281 SKV-----H-PEAEIIFGAVLEPQE--------QDFIRVAIVATD 311 (338)
T ss_dssp HHS-----C-TTCEEEEEEEECTTC--------CSEEEEEEEEEC
T ss_pred Hhc-----C-CCCcEEEEEEeCCCC--------CCeEEEEEEECC
Confidence 653 3 688899999999876 456788999886
No 7
>2vap_A FTSZ, cell division protein FTSZ homolog 1; polymerization, tubulin homolog, GTPase, septation, cell cycle, GTP-binding; HET: GDP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.32.1.1 d.79.2.1 PDB: 1w59_A 1w58_1* 1w5a_A* 1w5b_A* 1fsz_A* 1w5e_A*
Probab=100.00 E-value=1.3e-37 Score=298.85 Aligned_cols=230 Identities=17% Similarity=0.245 Sum_probs=200.8
Q ss_pred CCCCcccCcccchHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEeeeecCCCCCC
Q 018458 3 EYSKLCCDDVSVGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVS 82 (355)
Q Consensus 3 ~~~n~a~G~~~~g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~~v~P~~~~~ 82 (355)
-++|||+| +++.++++|.||+++|.||.+ +++||+|||||||+++.|++.+++ | .+++++|+|.+...
T Consensus 97 AGnn~a~G-----~~~~ee~~d~Ir~~le~~D~l---~i~as~GGGTGSG~ap~lae~lke-~---~~lt~~Vv~~Pf~~ 164 (364)
T 2vap_A 97 AGGNPKIG-----EEAAKESAEEIKAAIQDSDMV---FITCGLGGGTGTGSAPVVAEISKK-I---GALTVAVVTLPFVM 164 (364)
T ss_dssp CTTCHHHH-----HHHHHHTHHHHHHHHTTCSEE---EEEEETTSSHHHHHHHHHHHHHHH-T---TCEEEEEEEECCGG
T ss_pred CCCChHHH-----HHHHHHHHHHHHHHHhcCCEE---EEeccCCCCCCCChHHHHHHHHHH-h---CCcEEEEeCCCccc
Confidence 36889877 899999999999999999987 999999999999999999999998 7 35666666666556
Q ss_pred ccccchhhhHHhhhhhhhccceeeEechhHHHHHhhhccCCCCCCcchhhHHHHHHhhcCCceeecCCCCccchhhhhcc
Q 018458 83 TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTN 162 (355)
Q Consensus 83 ~~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~~~t~~~r~~~~~~~~l~~l~~~ 162 (355)
+.++++||+.+++++|.+++|++|++||++|+++|. .+.+ .++|.++|++|++.++++|..+||||.+|.|+.|+.++
T Consensus 165 eg~~~~ynA~~~l~~L~e~~D~~ividNeaL~~i~~-~l~i-~~af~~~N~li~~~v~~it~~ir~pG~iNvD~~dv~t~ 242 (364)
T 2vap_A 165 EGKVRMKNAMEGLERLKQHTDTLVVIPNEKLFEIVP-NMPL-KLAFKVADEVLINAVKGLVELITKDGLINVDFADVKAV 242 (364)
T ss_dssp GCHHHHHHHHHHHHHHHTTCSEEEEEEGGGHHHHST-TCCH-HHHHHHHHHHHHHHHHHHHHHHHSCCSBCCCHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHhCCeEEEEcHHHHHHHHc-cCCh-hhhhhhHHHHHHHHHhhhhHHhhcCCceeccHHHHHHh
Confidence 789999999999999999999999999999999998 7777 68999999999999999999999999999999999999
Q ss_pred ccCCCcccccccccccccchhhhhccccCHHHHHHhhcCCCCCCcccCCCCCccccccccccCcCChhhHHHHHHhhhcc
Q 018458 163 LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK 242 (355)
Q Consensus 163 L~p~P~~~fl~~~~~Pl~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ls~~~~~RG~~~~~~~~~~~~~~~~~ 242 (355)
|+| |++||+..++++- ..+..+++++.++ ++++.|+++.++++.+++..||+++++++.+++..++.+
T Consensus 243 L~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~~--~~ll~~d~~~ak~~l~~i~~~~dl~~~ev~~a~~~I~~~ 310 (364)
T 2vap_A 243 MNN-GGLAMIGIGESDS---------EKRAKEAVSMALN--SPLLDVDIDGATGALIHVMGPEDLTLEEAREVVATVSSR 310 (364)
T ss_dssp HTT-CEEEEEEEEEECS---------TTHHHHHHHHHHT--CTTCCSCGGGCCEEEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred ccC-CCeeEEEEEecCC---------cchHHHHHHHHHh--CcCcCcChhhcceEEEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 999 9999988776531 1357888888884 567789999999999999999999999999998888765
Q ss_pred CccccccCCC-CCceeeeecCCCc
Q 018458 243 RTIQFVDWCP-TGFKCGINYQPPT 265 (355)
Q Consensus 243 ~~~~f~~w~p-~~~~~~~~~~~p~ 265 (355)
.. | ..++++.+..||.
T Consensus 311 ~~-------~~a~ii~G~~~~~~~ 327 (364)
T 2vap_A 311 LD-------PNATIIWGATIDENL 327 (364)
T ss_dssp SC-------TTCEEEEEEEECTTC
T ss_pred cC-------CCCCEEEEEEecCCC
Confidence 32 3 4577777776654
No 8
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=1.9e-36 Score=290.19 Aligned_cols=231 Identities=13% Similarity=0.213 Sum_probs=199.3
Q ss_pred CCCcccCcccchHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEeeeecCCCCCCc
Q 018458 4 YSKLCCDDVSVGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVST 83 (355)
Q Consensus 4 ~~n~a~G~~~~g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~~v~P~~~~~~ 83 (355)
++||+ .|++..++.+|.||+++|.|| +|+++||+|||||||+++.|++.+++ |+ +++++|+|.+...+
T Consensus 82 G~n~~-----~G~~~aee~~d~I~~~le~~d---~~~i~as~GGGTGSG~ap~la~~~ke-~g---~lt~~Vvt~Pf~~E 149 (353)
T 1w5f_A 82 GGRPE-----IGEQAALESEEKIREVLQDTH---MVFITAGFGGGTGTGASPVIAKIAKE-MG---ILTVAIVTTPFYFE 149 (353)
T ss_dssp TTCHH-----HHHHHHHHTHHHHHHHTTTCS---EEEEEEETTSSHHHHHHHHHHHHHHH-TT---CEEEEEEEECCGGG
T ss_pred CCChH-----HHHHHHHHHHHHHHHHHccCC---EEEEEeccCCCccccHHHHHHHHHHH-hC---CcEEEEEeCCcccc
Confidence 57777 568899999999999999998 48999999999999999999999887 65 55666665554568
Q ss_pred cccchhhhHHhhhhhhhccceeeEechhHHHHHhhhccCCCCCCcchhhHHHHHHhhcCCceeecCCCCcc--chhhhhc
Q 018458 84 SVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNV--DVTEFQT 161 (355)
Q Consensus 84 ~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~~~t~~~r~~~~~~~--~l~~l~~ 161 (355)
..+++||+.+++++|.+++|++|++||++|+++|.+.+.+. ++|..+|++|++.++++|..+||||.+|. |+.|+.+
T Consensus 150 g~~~~~nA~~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~ll~~~v~~it~~ir~pG~iNv~~D~~dv~t 228 (353)
T 1w5f_A 150 GPERLKKAIEGLKKLRKHVDTLIKISNNKLMEELPRDVKIK-DAFLKADETLHQGVKGISELITKRGYIRLTSRFARIES 228 (353)
T ss_dssp CHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHTTSCTTCCHH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHhhCCEEEEEecHHHHhhhcccCCHH-HHHHHHHHHHHHHhcCchhhccCCcccccccCHHHHHH
Confidence 89999999999999999999999999999999998888887 78999999999999999999999999999 9999999
Q ss_pred cccCCCcccccccccccccchhhhhccccCHHHHHHhhcCCCCCCcccCCCCCccccccccccCcCChhhHHHHHHhhhc
Q 018458 162 NLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKT 241 (355)
Q Consensus 162 ~L~p~P~~~fl~~~~~Pl~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ls~~~~~RG~~~~~~~~~~~~~~~~ 241 (355)
+|+| |++||+..+.+.- ..+..+++++.|+ +++..|+++.++++.+++..||+++++++.+++..++.
T Consensus 229 ~L~~-~g~a~~g~g~a~g---------~~~v~ea~~~a~~--~~ll~~d~~~ak~~l~~i~~~~dl~~~ev~~a~~~I~~ 296 (353)
T 1w5f_A 229 VMKD-AGAAILGIGVGKG---------EHRAREAAKKAME--SKLIEHPVENASSIVFNITAPSNIRMEEVHEAAMIIRQ 296 (353)
T ss_dssp HHTT-CEEEEEEEEEEES---------TTHHHHHHHHHHT--CTTCCSCGGGCSEEEEEEEECTTCCHHHHHHHHHHHHT
T ss_pred hccC-CCeeEEEEeecCC---------cchHHHHHHHHHh--CCCcCCChhhcceeEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 9999 9999887665421 1357888999984 45667999999999999999999999999999988876
Q ss_pred cCccccccCCCCCceeeeecCCCc
Q 018458 242 KRTIQFVDWCPTGFKCGINYQPPT 265 (355)
Q Consensus 242 ~~~~~f~~w~p~~~~~~~~~~~p~ 265 (355)
+.. .+..++++.+..|+.
T Consensus 297 ~~~------~~~~i~~G~~~d~~~ 314 (353)
T 1w5f_A 297 NSS------EDADVKFGLIFDDEV 314 (353)
T ss_dssp TSC------TTSEEEEEEEECTTS
T ss_pred hhC------CCCcEEEEEEeCCCC
Confidence 532 156688888877654
No 9
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*
Probab=100.00 E-value=3.4e-36 Score=290.50 Aligned_cols=232 Identities=15% Similarity=0.187 Sum_probs=197.2
Q ss_pred CCCCcccCcccchHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEeeeecCCCCCC
Q 018458 3 EYSKLCCDDVSVGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVS 82 (355)
Q Consensus 3 ~~~n~a~G~~~~g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~~v~P~~~~~ 82 (355)
-++||+ .|+++.++.+|.||+++|.|| +|+++||+|||||||+++.|++.+++ |+ +++++|+|.+...
T Consensus 71 AGnn~a-----~G~e~aee~~d~Ir~~le~~D---~ffI~asmGGGTGSG~apvla~~ake-~g---~ltvsVvt~Pf~~ 138 (382)
T 2vxy_A 71 AGANPE-----VGKKAAEESKEQIEEALKGAD---MVFVTAGMGGGTGTGAAPVIAQIAKD-LG---ALTVGVVTRPFTF 138 (382)
T ss_dssp CTTCHH-----HHHHHHHHTHHHHHHHHTTCS---EEEEEEESSSSHHHHHHHHHHHHHHH-TT---CEEEEEEEECCGG
T ss_pred CCCChH-----HHHHHHHHHHHHHHHHHhhCC---EEEEEeccCCCCCCcHHHHHHHHHHH-hC---CCeEEEEeCCccc
Confidence 367888 458899999999999999998 48999999999999999999998875 75 4555565555556
Q ss_pred ccccchhhhHHhhhhhhhccceeeEechhHHHHHhhhccCCCCCCcchhhHHHHHHhhcCCceeecCCCCccchhhhhcc
Q 018458 83 TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTN 162 (355)
Q Consensus 83 ~~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~~~t~~~r~~~~~~~~l~~l~~~ 162 (355)
|.++++||+.+++++|.+++|++|++||++|+++|.+.+.+. ++|.++|++|++.++++|..+||+|.+|.|+.|+.++
T Consensus 139 Eg~~r~~nA~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~ll~~~vsgIt~~ir~pG~iNvD~~dv~t~ 217 (382)
T 2vxy_A 139 EGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPML-EAFREADNVLRQGVQGISDLIATPGLINLDFADVKTI 217 (382)
T ss_dssp GCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHSCTTCCHH-HHHHHHHHHHHHHHHHHHTTTSSCCTTCCCHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHhCCEEEEEccHHHHHHHHhcCCHH-HHHHHHHHHHHHHHHHHHHHHcCCCccccCHHHHHHh
Confidence 889999999999999999999999999999999998888887 6999999999999999999999999999999999999
Q ss_pred ccCCCcccccccccccccchhhhhccccCHHHHHHhhcCCCCCCcccCCCCCccccccccccCcCChhhHHHHHHhhhcc
Q 018458 163 LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK 242 (355)
Q Consensus 163 L~p~P~~~fl~~~~~Pl~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ls~~~~~RG~~~~~~~~~~~~~~~~~ 242 (355)
|+| |++||+..++++- .....++++++|+ ++++.|+++.++++.+++..+++++.+++.+++..++.+
T Consensus 218 L~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~~--s~ll~~d~~~ak~~l~~i~gg~dl~~~ev~~a~~~I~~~ 285 (382)
T 2vxy_A 218 MSN-KGSALMGIGIATG---------ENRAAEAAKKAIS--SPLLEAAIDGAQGVLMNITGGTNLSLYEVQEAADIVASA 285 (382)
T ss_dssp TTC-SSEEEEEEEEEES---------TTHHHHHHHHHHT--CTTSCSCGGGCSEEEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred ccC-CCceEEEEEeccc---------ccHHHHHHHHHHh--CcCcCCChhhcceeEEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 999 9999988776531 2347788888885 356779999999987776666689999999998888765
Q ss_pred CccccccCCCCCceeeeecCCCc
Q 018458 243 RTIQFVDWCPTGFKCGINYQPPT 265 (355)
Q Consensus 243 ~~~~f~~w~p~~~~~~~~~~~p~ 265 (355)
.. .+..++++.+..|+.
T Consensus 286 ~~------~~a~ii~G~~~d~~~ 302 (382)
T 2vxy_A 286 SD------QDVNMIFGSVINENL 302 (382)
T ss_dssp SC------TTCEEEEEEEECTTC
T ss_pred cC------CCCCEEEEeecCCCC
Confidence 32 355677887777654
No 10
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=7.8e-36 Score=283.32 Aligned_cols=242 Identities=15% Similarity=0.207 Sum_probs=201.4
Q ss_pred CCCCcccCcccchHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEeeeecCCCCCC
Q 018458 3 EYSKLCCDDVSVGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVS 82 (355)
Q Consensus 3 ~~~n~a~G~~~~g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~~v~P~~~~~ 82 (355)
-++||+ .|++..++.+|.||+++|.|| +|+++||+|||||||+++.|++ +.++|+ +++++|+|.|...
T Consensus 71 AG~n~~-----~G~~~~ee~~d~I~~~le~~d---~~~i~as~GGGTGSG~~~~la~-~a~e~g---~lt~~vv~~P~~~ 138 (320)
T 1ofu_A 71 AGANPE-----VGRQAALEDRERISEVLEGAD---MVFITTGMGGGTGTGAAPIIAE-VAKEMG---ILTVAVVTRPFPF 138 (320)
T ss_dssp CCSCHH-----HHHHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-HHHHTT---CEEEEEEEECCGG
T ss_pred CCCCHH-----HHHHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHH-HHHhcC---CcEEEEEeCCccc
Confidence 367777 558899999999999999998 5899999999999999997765 556674 4555555444446
Q ss_pred ccccchhhhHHhhhhhhhccceeeEechhHHHHHhhhccCCCCCCcchhhHHHHHHhhcCCceeecCCCCccchhhhhcc
Q 018458 83 TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTN 162 (355)
Q Consensus 83 ~~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~~~t~~~r~~~~~~~~l~~l~~~ 162 (355)
|..+++||+.+++++|.+++|++|++||++|+++|.+.+.+. +.|..+|++|++.++++|..+||||.+|.|+.|+.++
T Consensus 139 Eg~~~~~nA~~~l~~L~e~~D~~ividNe~L~~i~~~~l~i~-~af~~~n~~l~~~v~~it~~ir~pG~iNvD~~dv~t~ 217 (320)
T 1ofu_A 139 EGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLL-AAFAKADDVLAGAVRGISDIIKRPGMINVDFADVKTV 217 (320)
T ss_dssp GCHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHH-HHHHHHHHHHHHHHHHHHHHHHSCSSSSCCHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHhCCEEEEEecHHhhhhhhcCCCHH-HHHHHHHHHHHHHhcccHhhcccCCceeecHHHHHHh
Confidence 889999999999999999999999999999999999888887 7899999999999999999999999999999999999
Q ss_pred ccCCCcccccccccccccchhhhhccccCHHHHHHhhcCCCCCCcc-cCCCCCccccccccccCcCChhhHHHHHHhhhc
Q 018458 163 LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAK-CDPRHGKYMACCLMYRGDVVPKDVNAAVATIKT 241 (355)
Q Consensus 163 L~p~P~~~fl~~~~~Pl~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~ls~~~~~RG~~~~~~~~~~~~~~~~ 241 (355)
|+| |++||+..++++- .....+++++.++ ++++. |+++.++++.+++..||+++++++.+++..++.
T Consensus 218 l~~-~g~~~~g~g~a~g---------~~~~~~a~~~a~~--~~ll~~~d~~~ak~~l~~i~~~~d~~~~ev~~a~~~i~~ 285 (320)
T 1ofu_A 218 MSE-MGMAMMGTGCASG---------PNRAREATEAAIR--NPLLEDVNLQGARGILVNITAGPDLSLGEYSDVGNIIEQ 285 (320)
T ss_dssp HTT-CEEEEEEEEEEES---------TTHHHHHHHHHHT--CGGGTTCCGGGCSEEEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred ccC-CCeeEEEEEecCc---------ccHHHHHHHHHHh--ccccccCCccccceEEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 999 9999988776531 1346788888887 35555 899999999999999999999999999988876
Q ss_pred cCccccccCCCCCceeeeecCCCccCCCCCcccceeeeeecc
Q 018458 242 KRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMIS 283 (355)
Q Consensus 242 ~~~~~f~~w~p~~~~~~~~~~~p~~~~~~~~~~~~~s~~~l~ 283 (355)
+... +..++++.+..||. +.+.++++++
T Consensus 286 ~~~~------~~~ii~G~~~~~~~--------~~~v~vtvia 313 (320)
T 1ofu_A 286 FASE------HATVKVGTVIDADM--------RDELHVTVVA 313 (320)
T ss_dssp HSCT------TSEEEEEEEECTTC--------CSEEEEEEEE
T ss_pred hcCC------CCcEEEEEEcCCCC--------CCeEEEEEEE
Confidence 5321 45678888877654 3345666664
No 11
>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A*
Probab=100.00 E-value=5.8e-36 Score=288.89 Aligned_cols=242 Identities=14% Similarity=0.173 Sum_probs=201.6
Q ss_pred CCCcccCcccchHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEeeeecCCCCCCc
Q 018458 4 YSKLCCDDVSVGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVST 83 (355)
Q Consensus 4 ~~n~a~G~~~~g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~~v~P~~~~~~ 83 (355)
++||+ .|+++.++.+|.||+++|.|| +|+++||+|||||||+++.|++ |+++|+ +++++|+|.+...|
T Consensus 72 G~n~~-----~G~~~aee~~d~Ir~~le~~d---~~fi~as~GGGTGSG~ap~lae-la~e~g---~ltvsVv~~Pf~~E 139 (382)
T 1rq2_A 72 GADPE-----VGRKAAEDAKDEIEELLRGAD---MVFVTAGEGGGTGTGGAPVVAS-IARKLG---ALTVGVVTRPFSFE 139 (382)
T ss_dssp CCCHH-----HHHHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-HHHHHT---CEEEEEEEECCGGG
T ss_pred CCChH-----HHHHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHH-HHHHcC---CcEEEEEecCcccc
Confidence 56777 558899999999999999998 5899999999999999999998 778887 34444444444468
Q ss_pred cccchhhhHHhhhhhhhccceeeEechhHHHHHhhhccCCCCCCcchhhHHHHHHhhcCCceeecCCCCccchhhhhccc
Q 018458 84 SVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNL 163 (355)
Q Consensus 84 ~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~~~t~~~r~~~~~~~~l~~l~~~L 163 (355)
..+++||+.+++++|.+++|++|++||++|+++|.+.+.+. +.|..+|++|++.++++|..+||||.+|.|+.|+.++|
T Consensus 140 g~~~~~nA~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~li~~~vs~it~~ir~pG~iNvD~~dv~t~L 218 (382)
T 1rq2_A 140 GKRRSNQAENGIAALRESCDTLIVIPNDRLLQMGDAAVSLM-DAFRSADEVLLNGVQGITDLITTPGLINVDFADVKGIM 218 (382)
T ss_dssp CHHHHHHHHHHHHHHHHHCSEEEEEEHHHHTTSSCTTCCHH-HHHHHHHHHHHHHHHHHHHHHHSBCSSCCCHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhCCEEEEEechhHHHHhcCCCCHH-HHHHHHHHHHHHHHHHHHHHHccCCceeccHHHHHHhc
Confidence 89999999999999999999999999999999998888887 79999999999999999999999999999999999999
Q ss_pred cCCCcccccccccccccchhhhhccccCHHHHHHhhcCCCCCCcccCCCCCccccccccccCcCChhhHHHHHHhhhccC
Q 018458 164 VPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKR 243 (355)
Q Consensus 164 ~p~P~~~fl~~~~~Pl~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ls~~~~~RG~~~~~~~~~~~~~~~~~~ 243 (355)
+| |+++|+..+.+.- .....+++++.++ ++++.|+++.++++.+++..+++++.+++.+++..++.+.
T Consensus 219 ~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~~--s~ll~~d~~~ak~~l~~i~gg~dl~~~ev~~a~~~I~~~~ 286 (382)
T 1rq2_A 219 SG-AGTALMGIGSARG---------EGRSLKAAEIAIN--SPLLEASMEGAQGVLMSIAGGSDLGLFEINEAASLVQDAA 286 (382)
T ss_dssp TT-CEEEEEEEEEEES---------TTHHHHHHHHHHT--CGGGTTCGGGCSEEEEEEEECTTCCHHHHHHHHHHHHHHS
T ss_pred cC-CCeeEEEeeeccc---------ccHHHHHHHHHHh--CcCcCCChhchheEEEEEEeCCCCCHHHHHHHHHHHHHhh
Confidence 99 8888887665421 2347788888884 6777899999999887666666899999999988887653
Q ss_pred ccccccCCCCCceeeeecCCCccCCCCCcccceeeeeeccC
Q 018458 244 TIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISN 284 (355)
Q Consensus 244 ~~~f~~w~p~~~~~~~~~~~p~~~~~~~~~~~~~s~~~l~N 284 (355)
. .+..++++++..|+. +.+.++++|+-
T Consensus 287 ~------~~a~ii~G~~~d~~~--------~~~v~VtvIat 313 (382)
T 1rq2_A 287 H------PDANIIFGTVIDDSL--------GDEVRVTVIAA 313 (382)
T ss_dssp C------TTCEEEEEEEECGGG--------TTEEEEEEEEE
T ss_pred C------CCCCEEEEEEeCCCC--------CCeEEEEEEEc
Confidence 2 366788888877654 33456666654
No 12
>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=1.8e-35 Score=286.41 Aligned_cols=244 Identities=15% Similarity=0.212 Sum_probs=205.1
Q ss_pred CCCCcccCcccchHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEeeeecCCCCCC
Q 018458 3 EYSKLCCDDVSVGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVS 82 (355)
Q Consensus 3 ~~~n~a~G~~~~g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~~v~P~~~~~ 82 (355)
-++||+ .|+++.++.+|.||+++|.|| +|+++||+|||||||+++.|++.++ +|+ +++++|+|.+...
T Consensus 71 AG~n~~-----~G~~~aee~~d~I~~~le~~d---~~fI~asmGGGTGSG~ap~lae~~k-e~g---~ltvsVv~~Pf~~ 138 (394)
T 2vaw_A 71 AGANPE-----VGRQAALEDRERISEVLEGAD---MVFITTGMGGGTGTGAAPIIAEVAK-EMG---ILTVAVVTRPFPF 138 (394)
T ss_dssp CCSCHH-----HHHHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHHHHH-HHT---CEEEEEEEECCGG
T ss_pred CCCCHH-----HHHHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHHHHH-HcC---CcEEEEecCCccc
Confidence 367887 457899999999999999998 5899999999999999999999998 573 4555666554446
Q ss_pred ccccchhhhHHhhhhhhhccceeeEechhHHHHHhhhccCCCCCCcchhhHHHHHHhhcCCceeecCCCCccchhhhhcc
Q 018458 83 TSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTN 162 (355)
Q Consensus 83 ~~~~~~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~~~t~~~r~~~~~~~~l~~l~~~ 162 (355)
|..+++||+.+++++|.+++|++|++||++|+++|.+.+.+. +.|..+|++|++.++++|..+||||.+|.|+.|+.++
T Consensus 139 Eg~~r~ynA~~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~li~~~v~~it~~ir~pG~iNvD~~dv~t~ 217 (394)
T 2vaw_A 139 EGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLL-AAFAKADDVLAGAVRGISDIIKRPGMINVDFADVKTV 217 (394)
T ss_dssp GHHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHH-HHHHHHHHHHHHHHHHHHHHHHSBCSSCCCHHHHHHH
T ss_pred ccchhhHHHHHHHHHHHHhCCEEEEEecHHHHHHhhcCCChH-HHHHHHHHHHHHHHHHHHHHhcCCCcccccHHHHHHh
Confidence 889999999999999999999999999999999999888887 6899999999999999999999999999999999999
Q ss_pred ccCCCcccccccccccccchhhhhccccCHHHHHHhhcCCCCCCcccCCCCCccccccccccCcCChhhHHHHHHhhhcc
Q 018458 163 LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK 242 (355)
Q Consensus 163 L~p~P~~~fl~~~~~Pl~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ls~~~~~RG~~~~~~~~~~~~~~~~~ 242 (355)
|+| |+++++..+.+. ...+..+++++.|+ ++++..|+++.++++.+++..||+++.+++.+++..++.+
T Consensus 218 L~~-~g~a~~g~g~a~---------g~~rv~ea~~~A~~-spLl~~~d~~~ak~~lv~i~~~~dl~~~ev~~a~~~I~~~ 286 (394)
T 2vaw_A 218 MSE-MGMAMMGTGCAS---------GPNRAREATEAAIR-NPLLEDVNLQGARGILVNITAGPDLSLGEYSDVGNIIEQF 286 (394)
T ss_dssp HTT-TCCBEEEEEEEC---------STTHHHHHHHHHHT-CGGGTTCCTTTCSEEEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred ccC-CCceeEEEEecc---------ccchHHHHHHHHHh-cCccCCCCccccceeEEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 999 788887765442 12368889999998 5566679999999999999999999999999998888765
Q ss_pred CccccccCCCCCceeeeecCCCccCCCCCcccceeeeeeccC
Q 018458 243 RTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISN 284 (355)
Q Consensus 243 ~~~~f~~w~p~~~~~~~~~~~p~~~~~~~~~~~~~s~~~l~N 284 (355)
.. .+..++++++..||. +.+.++++++-
T Consensus 287 ~~------~~a~i~~G~~~d~~~--------~~~v~VtvIat 314 (394)
T 2vaw_A 287 AS------EHATVKVGTVIDADM--------RDELHVTVVAT 314 (394)
T ss_dssp SC------TTSEEEEEEEECSSC--------CSCEEEEEEEE
T ss_pred cC------CCCCEEEEeecCCCC--------CCeEEEEEEEc
Confidence 32 145688888877654 23456666654
No 13
>3m89_A FTSZ/tubulin-related protein; partition, TUBZ, GTP-binding, nucleotide-BIND structural protein; HET: GSP; 2.00A {Bacillus thuringiensis} PDB: 3m8k_A 2xka_A* 2xkb_A*
Probab=99.96 E-value=2.1e-30 Score=249.71 Aligned_cols=224 Identities=13% Similarity=0.095 Sum_probs=178.0
Q ss_pred CCCCcccCcccch-----HH--HHHHHHHHHHhhhh---hccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEe
Q 018458 3 EYSKLCCDDVSVG-----KE--IVDLCLDRIRKLAD---NCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 72 (355)
Q Consensus 3 ~~~n~a~G~~~~g-----~~--~~~~~~d~iR~~~E---~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~ 72 (355)
-++||++|++..| .+ +.+++++.||+.+| .||.+|+|++++|+|||||||+|+.|++.|+++|+++.+++
T Consensus 105 AG~np~~G~~~ag~~~~~~e~~~~d~I~~~I~~~~e~~~~cd~~d~f~I~aglGGGTGSG~gp~la~~lke~~~~~~~~~ 184 (427)
T 3m89_A 105 AARTPSVVTDLFDPETNPNANGYLDKLAQELGRKFTNEEGEVIVDQFLICLGAGGGVGTGWGSLVLQLIREQFFPCPVSM 184 (427)
T ss_dssp ------CHHHHHSSSSSTTHHHHHHHHHHHHHHHSBCTTSCBCCSEEEEEEETTSHHHHHHHHHHHHHHHTTCSSSCEEE
T ss_pred CCCCHHHHHHHhhcccCcccchHHHHHHHHHHHHhhccccCCCCCEEEEeeecCCCccccHHHHHHHHHHHhcCCCcEEE
Confidence 3789999999883 44 49999999999999 88999999999999999999999999999999999999999
Q ss_pred eeecCCCCCCccccchhhhHHhhhhh---hh------------ccceeeEechhHHHHHhhhccC--CCC---CCcc-hh
Q 018458 73 FTVYPSPQVSTSVVEPYNSVLSTHSL---LE------------HTDVAVLLDNEAIYDICRRSLD--IER---PTYT-NL 131 (355)
Q Consensus 73 ~~v~P~~~~~~~~~~~yN~~lsl~~l---~e------------~~d~~i~~dN~~l~~~~~~~l~--~~~---~~~~-~~ 131 (355)
++++|++. + .++||+.+++++| .+ ++|++|++||++|.+++.+... ... +.|. .+
T Consensus 185 vvt~P~~~--e--~~~~NA~~~l~~L~~L~~~~~~~~~~~~~~~~D~vividNe~l~~i~~~~~~~~~~~~~~~af~~~a 260 (427)
T 3m89_A 185 LISLPSGD--P--DEINNALVLLSEIDEFMREQDRLFGNSDIKPLANVIVNDNTQMQRIIESQKGTKDLKNRYVNWKEVA 260 (427)
T ss_dssp EEEECCSC--H--HHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSEEEEEEEEHHHHHHHHHHSSCSSSCCCSCSCHHHHH
T ss_pred EEEECCCC--c--cHHHHHHHHHHHHHHHhhhhcccccccccccccEEEEEehHHHHHHHhhccccccccchhhHHHHHH
Confidence 99999974 3 3459999999997 44 9999999999998877754332 122 3899 79
Q ss_pred hHHHHHHhhcCCcee-e-cCCCCccchhhhhccccCCCcccccccccccccchhhhhccccCHHHHHHhhcCCCCCCccc
Q 018458 132 NRLVSQVISSLTASL-R-FDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKC 209 (355)
Q Consensus 132 N~~ia~~i~~~t~~~-r-~~~~~~~~l~~l~~~L~p~P~~~fl~~~~~Pl~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 209 (355)
|++|++.|.+++... | ++|.+|.|++|+.++|.|.|. |++.++++...... .+..+.+++.|+.++.+..+
T Consensus 261 N~~Ia~~I~~I~~~i~~~~~G~iNvD~aDv~t~L~~~~G--~a~iG~a~~~~~d~-----~~~~~ai~~al~~~~Ll~~~ 333 (427)
T 3m89_A 261 NDNVVSTLHEINIIPENYGSDNVTYDPSDLIKLLSIPGR--FLTIGKARIAKFDL-----HSLENSIKRSLDEGFFSAEH 333 (427)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSSSCCCHHHHHHHHHSSCS--EEEEEEEEECSCSH-----HHHHHHHHHHHHSSTTCSCC
T ss_pred HHHHHHHHHHHHHHhccCCCCcEeecHHHHHHhCCCCCC--eEEEEEecccccch-----hhHHHHHHHHHhCCCccccc
Confidence 999999999998865 4 699999999999999999998 66777877654321 24667888889888888899
Q ss_pred CCCCCccccccccccCcCChhhHHHHHH
Q 018458 210 DPRHGKYMACCLMYRGDVVPKDVNAAVA 237 (355)
Q Consensus 210 ~~~~~~~ls~~~~~RG~~~~~~~~~~~~ 237 (355)
++..++++++++...-+....+..+.+.
T Consensus 334 d~~~Ak~~lv~i~g~~~~~~~~~~~~~~ 361 (427)
T 3m89_A 334 QFETATMYGGFVLRPSNADFFKDVNTEN 361 (427)
T ss_dssp CGGGCCEEEEEEEEESSCGGGGCHHHHH
T ss_pred CcccccEEEEEEEeCchhhhhhhHHHHH
Confidence 9998998888776544433333333333
No 14
>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A*
Probab=99.95 E-value=8.6e-29 Score=236.74 Aligned_cols=212 Identities=13% Similarity=0.225 Sum_probs=167.3
Q ss_pred CcccchHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEeeeecCCCCCCccccchh
Q 018458 10 DDVSVGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPY 89 (355)
Q Consensus 10 G~~~~g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~~v~P~~~~~~~~~~~y 89 (355)
|.+..|++..++.+|.||+.+|.|| +|+++||+|||||||+++.|++ +..+|+ +++++|+|.|...+..+++|
T Consensus 79 ~np~vG~eaaee~~d~Ir~~le~~D---~ffItagmGGGTGSGaapvIae-iake~g---~LtvsVVt~Pf~~Eg~~r~y 151 (396)
T 4dxd_A 79 ANPEIGKKAAEESREQIEDAIQGAD---MVFVTSGMGGGTGTGAAPVVAK-IAKEMG---ALTVGVVTRPFSFEGRKRQT 151 (396)
T ss_dssp TCHHHHHHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-HHHHTT---CEEEEEEEECCGGGCHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHcCCC---EEEEEeccCCCccccHHHHHHH-HHHhcC---CceEEEEeCCccccchHHHH
Confidence 3444678999999999999999999 4899999999999999998766 556776 47777776665568899999
Q ss_pred hhHHhhhhhhhccceeeEechhHHHHHhhhccCCCCCCcchhhHHHHHHhhcCCceeecCCCCccchhhhhccccCCCcc
Q 018458 90 NSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRI 169 (355)
Q Consensus 90 N~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~~~t~~~r~~~~~~~~l~~l~~~L~p~P~~ 169 (355)
|+.+++++|.+++|++|++||++|+++|.+.+.+. ++|..+|++|++.++++|..+||||.+|.|+.|+.++|.+. ..
T Consensus 152 NA~lgl~~L~e~vD~vIvIdNeaL~~I~~~~l~i~-~af~~aN~ll~q~VsgIT~~irfpG~iNvDfaDv~t~m~~~-G~ 229 (396)
T 4dxd_A 152 QAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMM-EAFKEADNVLRQGVQGISDLIAVSGEVNLDFADVKTIMSNQ-GS 229 (396)
T ss_dssp HHHHHHHHHHHHSSEEEEEEGGGGGGTCCTTCCHH-HHHHHHHHHHHHHHHHHHHHHHSCCTBCCCHHHHHHHHTTC-EE
T ss_pred HHHHHHHHHHhhCCEEEEEcCHHHHHhhcccccHH-HHHHHHHHHHHHHHHhhhhhhccCCcccCCHHHHHHHhhcC-Ce
Confidence 99999999999999999999999999998888877 59999999999999999999999999999999999999987 56
Q ss_pred cccccccccccchhhhhccccCHHHHHHhhcCCCCCCcccCCCCCccccccccccCcCChhhHHHHHHhhhc
Q 018458 170 HFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKT 241 (355)
Q Consensus 170 ~fl~~~~~Pl~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ls~~~~~RG~~~~~~~~~~~~~~~~ 241 (355)
.++..+.++-.. ...+.+++.++. .++..+....+.+-..+....++...|+.++...++.
T Consensus 230 A~mG~G~a~G~~---------ra~~A~~~Ai~s--PLL~~~i~gAkgvLvnItgg~dl~l~Ev~~~~~~i~~ 290 (396)
T 4dxd_A 230 ALMGIGVSSGEN---------RAVEAAKKAISS--PLLETSIVGAQGVLMNITGGESLSLFEAQEAADIVQD 290 (396)
T ss_dssp CEEEEEEEESTT---------HHHHHHHHHHCC--SSCSSCSTTCCEEEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred EEEEEEeccCCc---------hHHHHHHHHHhC--ccccCChhhhcceEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 666655554321 234444555533 2334444444444444444557778888887666543
No 15
>3v3t_A Cell division GTPase FTSZ, diverged; TUBZ, tubulin/FTSZ related, rossmann fold, GTP bindi structural protein; 2.30A {Clostridium botulinum C}
Probab=99.94 E-value=1.5e-27 Score=225.95 Aligned_cols=140 Identities=16% Similarity=0.207 Sum_probs=128.3
Q ss_pred CcccchHHHHHHHH-HHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEeeeecCCCCCCccccch
Q 018458 10 DDVSVGKEIVDLCL-DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEP 88 (355)
Q Consensus 10 G~~~~g~~~~~~~~-d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~~v~P~~~~~~~~~~~ 88 (355)
+.+..|++..++.. |.||+.+|+|+.+|||+++||+|||||||+++.|++.|+++||++++..++|+|++. +.++++
T Consensus 62 ~np~vG~eaaee~~~d~Ir~~le~c~g~dgffI~aslGGGTGSG~~pvLae~lke~~~~k~v~~vtV~Pf~~--Egvv~p 139 (360)
T 3v3t_A 62 KERKKAVGYAQTYYKQIIAQIMEKFSSCDIVIFVATMAGGAGSGITPPILGLAKQMYPNKHFGFVGVLPKAT--EDIDEH 139 (360)
T ss_dssp CCHHHHHHHHGGGHHHHHHHHHHHTTTCSEEEEEEETTSHHHHHHHHHHHHHHHHHCTTSEEEEEEEECCTT--SCHHHH
T ss_pred CCHHHHHHHHHHhHHHHHHHHHhcCCCCCeEEEeeccCCCccccHHHHHHHHHHHhCCCCeEEEEEEeCCCc--cchhhH
Confidence 34455788999999 999999999999999999999999999999999999999999999999999999985 679999
Q ss_pred hhhHHhhhhhhh---cccee--eEechhHHHHHhhhccCCCCCCcchhhHHHHHHhhcCCceeecCCCCccchhhhhccc
Q 018458 89 YNSVLSTHSLLE---HTDVA--VLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNL 163 (355)
Q Consensus 89 yN~~lsl~~l~e---~~d~~--i~~dN~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~~~t~~~r~~~~~~~~l~~l~~~L 163 (355)
||+++++++|.+ ++|++ |++||++ .++|.++|++|++++++++..+|++|.+|.|+.|+.+-+
T Consensus 140 yNA~l~l~~L~e~sD~vD~lcvividNea------------~~ay~~lN~lIaq~vs~lt~~l~~~G~iNVDfaDv~tvm 207 (360)
T 3v3t_A 140 MNAIACWNDIMRSTNEGKDISIYLLDNNK------------REKESDINKEFATLFNDFMNMSESHAEGVVDEDEISKLL 207 (360)
T ss_dssp HHHHHHHHHHHHHTTTTTSSEEEEEEGGG------------SSSHHHHHHHHHHHHHHHHGGGSCCSSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccCCceEEEEEeCCC------------chhHHHHHHHHHHHHHHHHHhhccCCceeeeHHHHHHHH
Confidence 999999999999 55555 9999998 489999999999999999999999999999999996544
No 16
>4ei7_A Plasmid replication protein REPX; GTP hydrolase, plasmid segregation; HET: GDP; 1.90A {Bacillus cereus} PDB: 4ei8_A 4ei9_A*
Probab=99.48 E-value=1.3e-14 Score=140.79 Aligned_cols=147 Identities=16% Similarity=0.140 Sum_probs=103.3
Q ss_pred ccchHHHHHHHHH----HHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEeeeecCCCCCCccccc
Q 018458 12 VSVGKEIVDLCLD----RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVE 87 (355)
Q Consensus 12 ~~~g~~~~~~~~d----~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~~v~P~~~~~~~~~~ 87 (355)
+..|++..++-.+ .|+..++.+|. +++++++|||||+|.++.+++.+++. ..+...++++|+.. |...+
T Consensus 87 p~~G~~aa~e~~~~i~~~l~~~~~~~d~---vfi~ag~GGGTGtGa~pvia~~~ke~--~~~~~~vvt~Pf~~--Eg~~~ 159 (389)
T 4ei7_A 87 PQVGEEAFVKHETKIFEAVKQEFEDRDF---IWITCGLGGGTGTGALLKAIEMLYEH--DYNFGLLLTLPRDA--EALKV 159 (389)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHTTTCSE---EEEEEETTSSHHHHHHHHHHHHHHHT--TCCEEEEEEECCGG--GHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCccE---EEEEecCCCCCccccHHHHHHHHHHc--CCCEEEEEEeCCCc--CchHH
Confidence 4445555554444 45554556664 59999999999999999999999885 34567777889864 44444
Q ss_pred hhhh---HHhhhhhhhccceeeEechhHHHHHhhhccC-C-CCCCcchhhHHHHHHhhcCCcee---ecCCCCccchhhh
Q 018458 88 PYNS---VLSTHSLLEHTDVAVLLDNEAIYDICRRSLD-I-ERPTYTNLNRLVSQVISSLTASL---RFDGALNVDVTEF 159 (355)
Q Consensus 88 ~yN~---~lsl~~l~e~~d~~i~~dN~~l~~~~~~~l~-~-~~~~~~~~N~~ia~~i~~~t~~~---r~~~~~~~~l~~l 159 (355)
..|+ +..|.+..+.+|.+|++||+.|.++..+.-+ . -...|...|.+|++.+..++... .-+|.+|.|+.|+
T Consensus 160 ~~~A~~~i~~l~~~~~~vd~~ividN~~l~~~~~~~~~~~~~~~af~~an~~l~~~v~~i~~~~~~~~~~g~in~D~aDv 239 (389)
T 4ei7_A 160 LENATSRIRSIAMNQEAFGSIVLIDNAKLYRKFEEENPSALANEYTSYSNKYIADALHEINLVTSSFTPFSDTHFDASEF 239 (389)
T ss_dssp HHHHHHHHHHHHHTGGGSSEEEEEEHHHHHHHHHHHCTTCCGGGHHHHHHHHHHHHHHHHHHHTTSSEESSSCCCCHHHH
T ss_pred HHHHHHHHHHHHHHhccCCeEEEeccHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeeHHHH
Confidence 4444 4445444678999999999999998754321 1 12568899999999776654332 2248899999999
Q ss_pred hccccC
Q 018458 160 QTNLVP 165 (355)
Q Consensus 160 ~~~L~p 165 (355)
.+-|-.
T Consensus 240 ~~vm~~ 245 (389)
T 4ei7_A 240 AQVINT 245 (389)
T ss_dssp HHHHTS
T ss_pred HHHhcC
Confidence 876643
No 17
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A*
Probab=98.71 E-value=1.3e-08 Score=93.11 Aligned_cols=120 Identities=16% Similarity=0.265 Sum_probs=87.1
Q ss_pred ccCcccchHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEeeeecCCCCCCccccc
Q 018458 8 CCDDVSVGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVE 87 (355)
Q Consensus 8 a~G~~~~g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~~v~P~~~~~~~~~~ 87 (355)
|-|....|.+..++-.+.|++.++.+|-+ +++.++|||||+|.++.+++.+++. +..+.++++.|-+. .....-
T Consensus 56 AGgdpe~g~e~a~e~~~eI~~~l~~aD~V---FVtaGLGGGTGTGaAPVvAeiake~--GalvVavVt~~~E~-~~~~~N 129 (315)
T 3r4v_A 56 AGGNRKVILPLVRPQIPALMDTIPEADFY---IVCYSLGGGSGSVLGPLITGQLADR--KASFVSFVVGAMES-TDNLGN 129 (315)
T ss_dssp ---CHHHHHHHHGGGHHHHHHTSCCBSCE---EEEEESSSSSHHHHHHHHHHHHHHT--TCCEEEEEEECCSS-HHHHHH
T ss_pred CCCChHHHHHHHHhhHHHHHHhcCCCCEE---EEEeccCCccccchHHHHHHHHHHc--CCCEEEEEecCCCc-chhhhc
Confidence 45666667777777778899999987765 9999999999999999999999997 23567777776321 122222
Q ss_pred hhhhHHhhhhhhhccceeeEechhHHHHHhhhccCCCCCCcchhhHHHHHHhhcC
Q 018458 88 PYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSL 142 (355)
Q Consensus 88 ~yN~~lsl~~l~e~~d~~i~~dN~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~~~ 142 (355)
..|++-+|..|.+.+|.+|+|+ +.+ ..+...++.+|+.+|..|.-+
T Consensus 130 ai~al~~LE~La~~~dt~Iv~d---~Le------n~~~lp~~~lN~eia~rL~al 175 (315)
T 3r4v_A 130 DIDTMKTLEAIAVNKHLPIVVN---YVP------NTQGRSYESINDEIAEKIRKV 175 (315)
T ss_dssp HHHHHHHHHHHHHHHTSCEEEE---EEE------CCTTCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhccCCcEEEe---ccc------cCCCCchHHHHHHHHHHHHHH
Confidence 3446778999999999999998 222 123456689999999877553
No 18
>2e4h_B Tubulin alpha-ubiquitous chain; cytoskeleton, CAP-Gly, complex structure, solution structure, CLIP, structural protein; NMR {Homo sapiens}
Probab=97.80 E-value=1.6e-05 Score=49.88 Aligned_cols=36 Identities=78% Similarity=1.218 Sum_probs=29.0
Q ss_pred hhHHHHHHhHHHHHHHHHHHcccCCCCCCCCCCCCC
Q 018458 320 GEFSEAREDLAALEKDYEEVGAESAEGEDGDEGDEY 355 (355)
Q Consensus 320 ~eF~ea~~~l~~l~~~Y~~~~~~~~~~~~~~~~~~~ 355 (355)
++|+||.++|.+|+.+|++++.+..+++++++++||
T Consensus 1 ~EFsEA~edl~~L~~dYee~~~~~~e~~~~~~~~~~ 36 (36)
T 2e4h_B 1 GEFSEAREDMAALEKDYEEVGVDSVEGEGEEEGEEY 36 (36)
T ss_pred CcchHHHHHHHHHHHHHHHHhccccccccccccccC
Confidence 489999999999999999998877665554445664
No 19
>3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum}
Probab=69.90 E-value=3.5 Score=37.02 Aligned_cols=61 Identities=16% Similarity=0.131 Sum_probs=39.6
Q ss_pred cCcccchHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEee
Q 018458 9 CDDVSVGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGF 73 (355)
Q Consensus 9 ~G~~~~g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~ 73 (355)
+|++..-..+.+.+++.|++.+++.....=+..=||||| +++....-.|+..+|...+..+
T Consensus 97 ~GF~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGG----alA~l~a~~l~~~~~~~~v~~~ 157 (258)
T 3g7n_A 97 RGVHRPWSAVHDTIITEVKALIAKYPDYTLEAVGHSLGG----ALTSIAHVALAQNFPDKSLVSN 157 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHH----HHHHHHHHHHHHHCTTSCEEEE
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeccCHHH----HHHHHHHHHHHHhCCCCceeEE
Confidence 444544456677788888888877655443444488885 4666777778888887554433
No 20
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=64.02 E-value=4.6 Score=32.67 Aligned_cols=31 Identities=16% Similarity=0.232 Sum_probs=26.2
Q ss_pred HHHHHHHHHhhhhhccCccceeEEEecCCCCC
Q 018458 19 VDLCLDRIRKLADNCTGLQGFLVFNAVGGGTG 50 (355)
Q Consensus 19 ~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtG 50 (355)
.+.+.++|++.+++.|. +|+.++.++-|||-
T Consensus 45 ~~~~~~~i~~~i~~~~~-~gvliLtDl~GGSp 75 (142)
T 3bed_A 45 LSGTQAKLAAILKEAGN-VPTLVLADLXGGTP 75 (142)
T ss_dssp HHHHHHHHHHHHHHHCS-CCEEEEESSTTSHH
T ss_pred HHHHHHHHHHHHHhcCC-CCEEEEEECCCCHH
Confidence 45677888888898988 99999999998874
No 21
>3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A*
Probab=59.90 E-value=5.9 Score=35.90 Aligned_cols=60 Identities=8% Similarity=0.101 Sum_probs=36.9
Q ss_pred CcccchHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEee
Q 018458 10 DDVSVGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGF 73 (355)
Q Consensus 10 G~~~~g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~ 73 (355)
|++..-..+.+.+.+.|++.+++.....=+..=||+||+ ++..+.-.|+..+|...+..+
T Consensus 112 Gf~~~~~~~~~~~~~~l~~~~~~~p~~~l~vtGHSLGGa----lA~l~a~~l~~~~~~~~~~~~ 171 (279)
T 3uue_A 112 GFQQAYNDLMDDIFTAVKKYKKEKNEKRVTVIGHSLGAA----MGLLCAMDIELRMDGGLYKTY 171 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEETHHHH----HHHHHHHHHHHHSTTCCSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCceEEEcccCHHHH----HHHHHHHHHHHhCCCCceEEE
Confidence 444444566677777888887776544434444888744 566666667777775443333
No 22
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=55.80 E-value=8.6 Score=30.65 Aligned_cols=32 Identities=13% Similarity=0.232 Sum_probs=26.2
Q ss_pred HHHHHHHHHhhhhhccCccceeEEEecCCCCC
Q 018458 19 VDLCLDRIRKLADNCTGLQGFLVFNAVGGGTG 50 (355)
Q Consensus 19 ~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtG 50 (355)
.+++.+++++.+++.|.-+|+.++.++-|||=
T Consensus 41 ~~~~~~~i~~~i~~~~~~~gvliLtDl~GGSp 72 (135)
T 1pdo_A 41 AETLIEKYNAQLAKLDTTKGVLFLVDTWGGSP 72 (135)
T ss_dssp HHHHHHHHHHHHTTSCCTTCEEEEESSTTSHH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEECCCCCH
Confidence 35667778888888888789999999998874
No 23
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=53.78 E-value=8.5 Score=31.25 Aligned_cols=39 Identities=8% Similarity=0.200 Sum_probs=28.6
Q ss_pred HHHHHHHHHhhhhhc-cCccceeEEEecCCCCCCCchHHH
Q 018458 19 VDLCLDRIRKLADNC-TGLQGFLVFNAVGGGTGSGLGSLL 57 (355)
Q Consensus 19 ~~~~~d~iR~~~E~c-D~lqgf~~~~sl~GGtGSG~gs~l 57 (355)
.+++.+++++.+++. |.-+|+.++.++-|||-.-.+..+
T Consensus 43 ~~~~~~~i~~~i~~~~~~~~gvliLtDl~GGSp~n~a~~l 82 (144)
T 3lfh_A 43 IEVVRKEVEKIIKEKLQEDKEIIIVVDLFGGSPFNIALSM 82 (144)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEESSSSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCCHHHHHHHH
Confidence 356667777777777 777899999999999865444444
No 24
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=52.83 E-value=15 Score=29.10 Aligned_cols=39 Identities=18% Similarity=0.461 Sum_probs=30.2
Q ss_pred HHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHH
Q 018458 19 VDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 59 (355)
Q Consensus 19 ~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle 59 (355)
.+++.+++++.+++.|.-+|..++.++ ||-+-++..+.+
T Consensus 44 ~~~~~~~i~~~i~~~d~~~GVLiL~Dm--GSp~n~a~~l~~ 82 (130)
T 3gx1_A 44 VKAMYEKLKQTVVKLNPVKGVLILSDM--GSLTSFGNILTE 82 (130)
T ss_dssp HHHHHHHHHHHHHTSCCTTCEEEEECS--GGGGTHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCEEEEEeC--CCHHHHHHHHHH
Confidence 467788899999999999999999999 555555554443
No 25
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=47.28 E-value=13 Score=30.25 Aligned_cols=39 Identities=18% Similarity=0.166 Sum_probs=29.5
Q ss_pred HHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHH
Q 018458 19 VDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 57 (355)
Q Consensus 19 ~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l 57 (355)
.+.+.++++..+++.|.-+|+.++.++-|||-.-.+..+
T Consensus 41 ~~~~~~~i~~~i~~~~~~~gvlvLtDl~GGSp~n~a~~~ 79 (150)
T 3ipr_A 41 VQALGGQIKTAIENVQQGDGVLVMVDLLSASPYNQAVLV 79 (150)
T ss_dssp HHHHHHHHHHHHHHHCSSSCEEEEESSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHH
Confidence 456677788888888888899999999999854444443
No 26
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=46.29 E-value=43 Score=29.66 Aligned_cols=61 Identities=15% Similarity=0.269 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEeeeecCCC
Q 018458 18 IVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSP 79 (355)
Q Consensus 18 ~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~~v~P~~ 79 (355)
+.+.+.+.+...++.......=.-+-++|.||| .++..++..+...+|...+...+|.|+.
T Consensus 32 ~~~~~~~~l~~~l~~~~~~~~~~~VLDiG~GtG-~~~~~~l~~l~~~~~~~~v~~~~vD~S~ 92 (292)
T 2aot_A 32 MQEFMDKKLPGIIGRIGDTKSEIKILSIGGGAG-EIDLQILSKVQAQYPGVCINNEVVEPSA 92 (292)
T ss_dssp HHHHHHHTHHHHSSSTTTTCSEEEEEEETCTTS-HHHHHHHHHHHHHSTTCEEEEEEECSCH
T ss_pred HHHHHHHhchhHHhhccCCCCCCeEEEEcCCCC-HHHHHHHHHHHhhCCCceeeEEEEeCCH
Confidence 333334445555554432222235678888887 4666678888888877544447787764
No 27
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=45.91 E-value=45 Score=27.98 Aligned_cols=111 Identities=11% Similarity=0.029 Sum_probs=55.8
Q ss_pred HHHHHHHHHhhhhh-ccCccce-eEEEecCCCCCCCchHHHHHHhhhhhCCcceEeeeecCCCCCCccccchhhhHHhhh
Q 018458 19 VDLCLDRIRKLADN-CTGLQGF-LVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 96 (355)
Q Consensus 19 ~~~~~d~iR~~~E~-cD~lqgf-~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~~v~P~~~~~~~~~~~yN~~lsl~ 96 (355)
...+...||+.+++ .+ +|+ -++.+.+.|.- -+++.++-.|+.+||. +--.+|+|+....+.. .+-| -....
T Consensus 25 ~~~ik~~L~~~l~~l~~--~G~~~~isgga~G~D-~~aae~vl~lk~~y~~--i~L~~v~Pf~~~~~~w-~~~~-~~~y~ 97 (181)
T 2nx2_A 25 LYYIKKAIKNRLIAFLD--EGLEWILISGQLGVE-LWAAEAAYDLQEEYPD--LKVAVITPFYEQEKNW-KEPN-KEQYE 97 (181)
T ss_dssp HHHHHHHHHHHHHHHHT--TTCCEEEECCCTTHH-HHHHHHHHTTTTTCTT--CEEEEEESSBCTTTTS-CHHH-HHHHH
T ss_pred HHHHHHHHHHHHHHHHh--CCCcEEEECCCccHH-HHHHHHHHHhccccCC--ceEEEEecccchhhCC-CHHH-HHHHH
Confidence 34455555555444 22 254 33444343333 2344444455678885 3445677887543322 2222 34577
Q ss_pred hhhhccceeeEechhHHHHHhhhccCCCCCCcchhhHHHHHHhhcCCce
Q 018458 97 SLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTAS 145 (355)
Q Consensus 97 ~l~e~~d~~i~~dN~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~~~t~~ 145 (355)
.+.+.||-+..+...... ....|..-|+.+...-+.+..-
T Consensus 98 ~ll~~aD~v~~l~~~~y~---------~~~~~~~rn~~mvd~sD~liav 137 (181)
T 2nx2_A 98 AVLAQADYEASLTHRPYE---------SPLQFKQKNQFFIDKSDGLLLL 137 (181)
T ss_dssp HHHHHCSEEEESSSSBCC---------CHHHHHHHHHHHHHHSSEEEEE
T ss_pred HHHHhCCeEEecccCCCC---------CHHHHHHHHHHHHHHCCEEEEE
Confidence 777788887766432110 0013446677666655544443
No 28
>3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0
Probab=45.23 E-value=13 Score=34.07 Aligned_cols=56 Identities=11% Similarity=0.043 Sum_probs=33.2
Q ss_pred cCcccchHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCc
Q 018458 9 CDDVSVGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKK 68 (355)
Q Consensus 9 ~G~~~~g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~ 68 (355)
+|++..-+.+.+.+.+.|++.+++.....=...=||+|| +++..+.-.|+...++.
T Consensus 127 ~GF~~~~~~~~~~i~~~l~~~~~~~p~~~i~vtGHSLGG----alA~l~a~~l~~~~~~~ 182 (301)
T 3o0d_A 127 NGFIQSYNNTYNQIGPKLDSVIEQYPDYQIAVTGHSLGG----AAALLFGINLKVNGHDP 182 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHH----HHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEeccChHH----HHHHHHHHHHHhcCCCc
Confidence 355544456667777778887776544333333378774 35566666666665443
No 29
>3gdw_A Sigma-54 interaction domain protein; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=42.26 E-value=25 Score=28.26 Aligned_cols=39 Identities=21% Similarity=0.392 Sum_probs=29.2
Q ss_pred HHHHHHHHHhhhhh--ccCccceeEEEecCCCCCCCchHHHHH
Q 018458 19 VDLCLDRIRKLADN--CTGLQGFLVFNAVGGGTGSGLGSLLLE 59 (355)
Q Consensus 19 ~~~~~d~iR~~~E~--cD~lqgf~~~~sl~GGtGSG~gs~lle 59 (355)
.+++.+++++.+++ .|.-+|..++.++ ||-+-++..+.+
T Consensus 44 ~~~~~~~i~~~i~~~~~d~g~GVLiL~Dm--GSp~n~a~~l~~ 84 (139)
T 3gdw_A 44 VQTMYEQLRNQVITQKESLNNGILLLTDM--GSLNSFGNMLFE 84 (139)
T ss_dssp HHHHHHHHHHHHHTSTGGGTTCEEEEECS--GGGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCCCCEEEEEeC--CCHHHHHHHHHH
Confidence 46778888888888 7788999999999 555555555443
No 30
>1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17
Probab=41.56 E-value=20 Score=32.23 Aligned_cols=51 Identities=14% Similarity=0.105 Sum_probs=31.9
Q ss_pred cCcccchHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhh
Q 018458 9 CDDVSVGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSV 63 (355)
Q Consensus 9 ~G~~~~g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~d 63 (355)
+|++..-..+.+.+.+.|++..++.....=+..=|||||+ ++..+.-.+++
T Consensus 110 ~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGa----lA~l~a~~l~~ 160 (279)
T 1tia_A 110 LGFWSSWKLVRDDIIKELKEVVAQNPNYELVVVGHSLGAA----VATLAATDLRG 160 (279)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCHHHH----HHHHHHHHHHh
Confidence 5666555667777888888887776554444555787754 44455555554
No 31
>3mtq_A Putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease...; PTS system fructose IIA component; 1.70A {Klebsiella pneumoniae subsp}
Probab=41.02 E-value=10 Score=31.36 Aligned_cols=32 Identities=9% Similarity=0.124 Sum_probs=25.1
Q ss_pred HHHHHHHHhhhhhccCccceeEEEecCCCCCC
Q 018458 20 DLCLDRIRKLADNCTGLQGFLVFNAVGGGTGS 51 (355)
Q Consensus 20 ~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGS 51 (355)
+++.+++++.+++.|.-+|+.++.++-|||-.
T Consensus 61 ~~~~~~~~~~i~~~~~~~gVLiLtDl~GGSP~ 92 (159)
T 3mtq_A 61 VDLTQQVEALVARFPAQDELIVITDIFAGSVN 92 (159)
T ss_dssp SCHHHHHHHHHHTSCTTSEEEEEESCTTSHHH
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEeCCCCCHH
Confidence 35667777788888877889999999988753
No 32
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=32.84 E-value=45 Score=29.99 Aligned_cols=61 Identities=20% Similarity=0.298 Sum_probs=32.2
Q ss_pred cCCCCCCCchHHHHHHhhhhhCCcceEeeeecCCCCCCccccchhhhHHhhhhhhhccceeeEe
Q 018458 45 VGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLL 108 (355)
Q Consensus 45 l~GGtGSG~gs~lle~l~deyp~~~~~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~~d~~i~~ 108 (355)
+.|||| ++|+.|++.|.++ +..+..+.-.+....-+.+.--+...-.+..+.+.+|.+|-.
T Consensus 24 VtGatG-~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 84 (347)
T 4id9_A 24 VTGSAG-RVGRAVVAALRTQ--GRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGVSAVLHL 84 (347)
T ss_dssp EETTTS-HHHHHHHHHHHHT--TCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHTTCSEEEEC
T ss_pred EECCCC-hHHHHHHHHHHhC--CCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHhCCCEEEEC
Confidence 457887 8999999999876 223333333332110011111222333455555667776643
No 33
>3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae}
Probab=32.12 E-value=31 Score=31.83 Aligned_cols=53 Identities=15% Similarity=0.115 Sum_probs=32.3
Q ss_pred cCcccchHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhh
Q 018458 9 CDDVSVGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDY 65 (355)
Q Consensus 9 ~G~~~~g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~dey 65 (355)
+|++..-..+.+.+.+.|++..++.....=+..-|||||+ ++..+.-.|+...
T Consensus 109 ~GF~~a~~~i~~~l~~~l~~~~~~~p~~~i~vtGHSLGGA----lA~L~a~~l~~~~ 161 (319)
T 3ngm_A 109 SGFQNAWNEISAAATAAVAKARKANPSFKVVSVGHSLGGA----VATLAGANLRIGG 161 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSTTCEEEEEEETHHHH----HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCceEEeecCHHHH----HHHHHHHHHHhcC
Confidence 4555555566777777788777766544434444888754 4555555565543
No 34
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=31.07 E-value=21 Score=32.48 Aligned_cols=34 Identities=29% Similarity=0.456 Sum_probs=25.9
Q ss_pred HHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHH
Q 018458 19 VDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLER 60 (355)
Q Consensus 19 ~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~ 60 (355)
.+++++++|+.+++=.-+ +++|.|+|++++..|.
T Consensus 13 r~~il~~l~~~i~~~~~i--------ig~gaGtGlsAk~~e~ 46 (286)
T 2p10_A 13 RSELVDRFQKKIRAGEPI--------IGGGAGTGLSAKSEEA 46 (286)
T ss_dssp HHHHHHHHHHHHHTTCCE--------EEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCce--------EEEecccchhhHHHHh
Confidence 578899999999865554 4557788999887655
No 35
>1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A*
Probab=30.98 E-value=29 Score=30.79 Aligned_cols=51 Identities=12% Similarity=0.051 Sum_probs=31.1
Q ss_pred cCcccchHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhh
Q 018458 9 CDDVSVGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSV 63 (355)
Q Consensus 9 ~G~~~~g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~d 63 (355)
+|++..-..+.+.+.+.|++..++.....=+..=|||||+ ++..+.-.|+.
T Consensus 98 ~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGa----lA~l~a~~l~~ 148 (261)
T 1uwc_A 98 GGYYIGWISVQDQVESLVKQQASQYPDYALTVTGHSLGAS----MAALTAAQLSA 148 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHH----HHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHCCCceEEEEecCHHHH----HHHHHHHHHhc
Confidence 3444444556677788888887776544444445888754 45555555553
No 36
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=29.65 E-value=1.2e+02 Score=28.36 Aligned_cols=93 Identities=15% Similarity=0.191 Sum_probs=53.5
Q ss_pred hHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEeeeecCCCCCC-ccccchhhhHH
Q 018458 15 GKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVS-TSVVEPYNSVL 93 (355)
Q Consensus 15 g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~~v~P~~~~~-~~~~~~yN~~l 93 (355)
..+.+.++.+.|++.++ ..+||.|+|+.. |= -.++..+..+-+..+|-.+++=+-.|....+ |...-.++++.
T Consensus 84 t~~~w~~la~~I~~~~~---~~dG~VItHGTD--Tm-eeTA~~Ls~~l~~~~kPVVlTGAmrP~~~~~sDg~~NL~~Av~ 157 (358)
T 2him_A 84 TPEDWQHIAEDIKAHYD---DYDGFVILHGTD--TM-AYTASALSFMLENLGKPVIVTGSQIPLAELRSDGQINLLNALY 157 (358)
T ss_dssp CHHHHHHHHHHHHHHGG---GCSEEEEECCST--TH-HHHHHHHHHHEETCCSCEEEECCSSCTTSTTCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHh---cCCeEEEecCch--HH-HHHHHHHHHHHhcCCCCEEEeCCCCCCcCCCcchHHHHHHHHH
Confidence 34556666666766665 477999999554 42 4566666666555666666777888876533 43433444433
Q ss_pred hhhhhhhccceeeEechhHHHH
Q 018458 94 STHSLLEHTDVAVLLDNEAIYD 115 (355)
Q Consensus 94 sl~~l~e~~d~~i~~dN~~l~~ 115 (355)
...-.+ +..|+++=|+.+..
T Consensus 158 -~A~~~~-~~GV~V~fn~~i~~ 177 (358)
T 2him_A 158 -VAANYP-INEVTLFFNNRLYR 177 (358)
T ss_dssp -HHHHSC-CSSEEEEETTEEEE
T ss_pred -HHhCCC-CCCeEEEECCEEee
Confidence 222222 23555555555543
No 37
>3b48_A Uncharacterized protein; enterococcus faecalis V583, structural genomics, PSI-2, PROT structure initiative; 2.21A {Enterococcus faecalis} SCOP: c.54.1.2
Probab=29.47 E-value=18 Score=28.76 Aligned_cols=28 Identities=18% Similarity=0.272 Sum_probs=21.9
Q ss_pred HHHHHHHhhhhhccCccceeEEEecCCCC
Q 018458 21 LCLDRIRKLADNCTGLQGFLVFNAVGGGT 49 (355)
Q Consensus 21 ~~~d~iR~~~E~cD~lqgf~~~~sl~GGt 49 (355)
...++|++.+++.|.-+|+.++.++ |||
T Consensus 49 ~~~~~i~~ai~~~~~~dgVlvltDL-Ggs 76 (135)
T 3b48_A 49 SDPMKIIDTINEADSDREFLIFADL-GSA 76 (135)
T ss_dssp CCHHHHHHHHHHSCSSCEEEEEECS-HHH
T ss_pred HHHHHHHHHHHhcCCCCCEEEEEeC-CCC
Confidence 3456677778888877899999999 665
No 38
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=28.94 E-value=25 Score=30.70 Aligned_cols=20 Identities=30% Similarity=0.546 Sum_probs=17.5
Q ss_pred cCCCCCCCchHHHHHHhhhh
Q 018458 45 VGGGTGSGLGSLLLERLSVD 64 (355)
Q Consensus 45 l~GGtGSG~gs~lle~l~de 64 (355)
+.||+|+|+|..+++.|.++
T Consensus 27 ITGasg~GIG~~~a~~l~~~ 46 (266)
T 3o38_A 27 VTAAAGTGIGSTTARRALLE 46 (266)
T ss_dssp ESSCSSSSHHHHHHHHHHHT
T ss_pred EECCCCCchHHHHHHHHHHC
Confidence 56888899999999999876
No 39
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=28.22 E-value=1.3e+02 Score=27.74 Aligned_cols=72 Identities=19% Similarity=0.194 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEeeeecCCCCCC-ccccchhhhH
Q 018458 16 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVS-TSVVEPYNSV 92 (355)
Q Consensus 16 ~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~~v~P~~~~~-~~~~~~yN~~ 92 (355)
.+.+.++.+.|++.+++ +..+||.|+|+.. |= -.++..+..+-+ .+|-.+++=+-.|....+ |...-.++++
T Consensus 67 ~~~w~~la~~I~~~~~~-~~~dG~VItHGTD--Tm-eeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 139 (332)
T 2wlt_A 67 EEIWFKLAQRAQELLDD-SRIQGVVITHGTD--TL-EESAYFLNLVLH-STKPVVLVGAMRNASSLSADGALNLYEAV 139 (332)
T ss_dssp HHHHHHHHHHHHHHHTS-TTCCEEEEECCSS--SH-HHHHHHHHHHCC-CSSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcc-CCCCEEEEecCch--hH-HHHHHHHHHHhC-CCCCEEEECCCCCCCCCCcchHHHHHHHH
Confidence 34555666666665543 4688999999654 42 456666666544 566556777788876533 4444344443
No 40
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=28.16 E-value=1.3e+02 Score=27.62 Aligned_cols=72 Identities=15% Similarity=0.136 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEeeeecCCCCCC-ccccchhhhH
Q 018458 16 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVS-TSVVEPYNSV 92 (355)
Q Consensus 16 ~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~~v~P~~~~~-~~~~~~yN~~ 92 (355)
.+.+.++.+.|++.+++ +..+||.|+|+.. |= -..+..+..+-+ .+|-.+++=+-.|....+ |...-.++++
T Consensus 65 ~~~w~~la~~I~~~~~~-~~~dG~VItHGTD--Tm-eeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 137 (330)
T 1wsa_A 65 GKVWLKLAKRVNELLAQ-KETEAVIITHGTD--TM-EETAFFLNLTVK-SQKPVVLVGAMRPGSSMSADGPMNLYNAV 137 (330)
T ss_dssp HHHHHHHHHHHHHHHHS-TTCCCEEEECCSS--SH-HHHHHHHHHHCC-CSSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcc-CCCCEEEEEcCcc--hH-HHHHHHHHHHcC-CCCCEEEeCCCCCCCCCCCchHHHHHHHH
Confidence 45556666666666543 4678999999654 42 456666666544 556556777788876533 3333344443
No 41
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=27.94 E-value=97 Score=28.55 Aligned_cols=40 Identities=25% Similarity=0.477 Sum_probs=28.7
Q ss_pred HHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcce
Q 018458 26 IRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSK 70 (355)
Q Consensus 26 iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~ 70 (355)
++..++.++.+.+..-+.++||||| .++..|...||+...
T Consensus 189 ~~~~~~~~~~~~~~~~vlDvG~G~G-----~~~~~l~~~~p~~~~ 228 (364)
T 3p9c_A 189 TKKLLELYHGFEGLGTLVDVGGGVG-----ATVAAIAAHYPTIKG 228 (364)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTS-----HHHHHHHHHCTTCEE
T ss_pred HHHHHHhcccccCCCEEEEeCCCCC-----HHHHHHHHHCCCCeE
Confidence 4456667776778889999999998 345556667887644
No 42
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=27.86 E-value=57 Score=28.31 Aligned_cols=28 Identities=29% Similarity=0.471 Sum_probs=20.5
Q ss_pred cCCCCCCCchHHHHHHhhhhhCCcceEee
Q 018458 45 VGGGTGSGLGSLLLERLSVDYGKKSKLGF 73 (355)
Q Consensus 45 l~GGtGSG~gs~lle~l~deyp~~~~~~~ 73 (355)
+.|||| ++|+.+++.|.+++|...+..+
T Consensus 5 VtGatG-~iG~~l~~~L~~~~~g~~V~~~ 32 (287)
T 2jl1_A 5 VTGATG-QLGGLVIQHLLKKVPASQIIAI 32 (287)
T ss_dssp ETTTTS-HHHHHHHHHHTTTSCGGGEEEE
T ss_pred EEcCCc-hHHHHHHHHHHHhCCCCeEEEE
Confidence 568887 8999999999887544444443
No 43
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=27.50 E-value=1e+02 Score=28.48 Aligned_cols=42 Identities=24% Similarity=0.533 Sum_probs=29.1
Q ss_pred HHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEe
Q 018458 26 IRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 72 (355)
Q Consensus 26 iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~ 72 (355)
++..++.++.+.+..-+-++||||| .++..|...+|+.....
T Consensus 191 ~~~~~~~~~~~~~~~~vlDvG~G~G-----~~~~~l~~~~p~~~~~~ 232 (368)
T 3reo_A 191 MKKILEMYNGFEGLTTIVDVGGGTG-----AVASMIVAKYPSINAIN 232 (368)
T ss_dssp HHHHHTTCCTTTTCSEEEEETCTTS-----HHHHHHHHHCTTCEEEE
T ss_pred HHHHHHhcccccCCCEEEEeCCCcC-----HHHHHHHHhCCCCEEEE
Confidence 3445666666778888999999998 35555667788764433
No 44
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=27.34 E-value=1.4e+02 Score=27.45 Aligned_cols=72 Identities=14% Similarity=0.167 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEeeeecCCCCCC-ccccchhhhH
Q 018458 16 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVS-TSVVEPYNSV 92 (355)
Q Consensus 16 ~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~~v~P~~~~~-~~~~~~yN~~ 92 (355)
.+.+.++.+.|++.+++ +..+||.|+|+.. |= -..+..+..+-+ .+|-.+++=+-.|....+ +...-.++++
T Consensus 67 ~~~w~~la~~I~~~~~~-~~~dG~VItHGTD--Tm-eeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 139 (327)
T 1o7j_A 67 GDVVLKLSQRVNELLAR-DDVDGVVITHGTD--TV-EESAYFLHLTVK-SDKPVVFVAAMRPATAISADGPMNLLEAV 139 (327)
T ss_dssp HHHHHHHHHHHHHHHTS-TTCCEEEEECCST--TH-HHHHHHHHHHCC-CCSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcc-CCCCEEEEecCch--hH-HHHHHHHHHHhC-CCCCEEEeCCCCCCCCCCCchHHHHHHHH
Confidence 34555666666665543 4688999999554 42 456666666544 566556777788876533 4343344443
No 45
>3ct6_A PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DHAM; mixed alpha beta structure, glycerol metabolism; 1.10A {Lactococcus lactis} SCOP: c.54.1.2 PDB: 3cr3_C*
Probab=26.63 E-value=31 Score=27.35 Aligned_cols=27 Identities=19% Similarity=0.386 Sum_probs=20.3
Q ss_pred HHHHHHHhhhhhccCccceeEEEecCCCC
Q 018458 21 LCLDRIRKLADNCTGLQGFLVFNAVGGGT 49 (355)
Q Consensus 21 ~~~d~iR~~~E~cD~lqgf~~~~sl~GGt 49 (355)
...++|++.+++.| =+|+.++.++ |||
T Consensus 44 ~~~~~i~~ai~~~~-~dgVlvltDL-Ggs 70 (131)
T 3ct6_A 44 TSFDRVMNAIEENE-ADNLLTFFDL-GSA 70 (131)
T ss_dssp CCHHHHHHHHHHSS-CSEEEEEESS-GGG
T ss_pred HHHHHHHHHHHhCC-CCCEEEEEeC-CCC
Confidence 34566777777777 3899999999 664
No 46
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=26.51 E-value=1.3e+02 Score=27.72 Aligned_cols=94 Identities=17% Similarity=0.194 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEeeeecCCCCCC-ccccchhhhHHh
Q 018458 16 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVS-TSVVEPYNSVLS 94 (355)
Q Consensus 16 ~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~~v~P~~~~~-~~~~~~yN~~ls 94 (355)
.+.+..+.+.|++.+++ +..+||.|+|+.. |= -..+..+..+-+ .+|-.+++=+-.|....+ +...-.++++.
T Consensus 64 ~~~w~~la~~I~~~~~~-~~~dG~VItHGTD--Tm-eeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av~- 137 (331)
T 1agx_A 64 DKELLSLARQVNDLVKK-PSVNGVVITHGTD--TM-EETAFFLNLVVH-TDKPIVLVGSMRPSTALSADGPLNLYSAVA- 137 (331)
T ss_dssp HHHHHHHHHHHHHHHTS-TTCCEEEEECCGG--GH-HHHHHHHHHHCC-CSSCEEEECCSSCTTSTTCSHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHhcc-CCCCEEEEecCcc--hH-HHHHHHHHHHcC-CCCCEEEeCCCCCCCCCCchhHHHHHHHHH-
Confidence 45555666666665543 4688999999654 42 456666665544 556556677788876533 33333334332
Q ss_pred hhhhhh-ccceeeEechhHHHH
Q 018458 95 THSLLE-HTDVAVLLDNEAIYD 115 (355)
Q Consensus 95 l~~l~e-~~d~~i~~dN~~l~~ 115 (355)
+..--+ .--.|+++=|+.+..
T Consensus 138 ~A~~~~~~~~GV~V~fn~~i~~ 159 (331)
T 1agx_A 138 LASSNEAKNKGVMVLMNDSIFA 159 (331)
T ss_dssp HHTCTTCTTSCEEEEETTEEEE
T ss_pred HHhCcCCCCCeEEEEECCEEee
Confidence 222211 112454444555543
No 47
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=25.70 E-value=87 Score=27.56 Aligned_cols=29 Identities=34% Similarity=0.600 Sum_probs=20.3
Q ss_pred cCCCCCCCchHHHHHHhhhhhCCcceEeee
Q 018458 45 VGGGTGSGLGSLLLERLSVDYGKKSKLGFT 74 (355)
Q Consensus 45 l~GGtGSG~gs~lle~l~deyp~~~~~~~~ 74 (355)
+.|||| ++|+.+++.|.++.+...+....
T Consensus 4 VtGatG-~iG~~l~~~L~~~~~g~~V~~~~ 32 (317)
T 3ajr_A 4 VTGSSG-QIGTELVPYLAEKYGKKNVIASD 32 (317)
T ss_dssp EESTTS-TTHHHHHHHHHHHHCGGGEEEEE
T ss_pred EEcCCc-HHHHHHHHHHHHhcCCCEEEEec
Confidence 457887 89999999998874433444443
No 48
>1zq1_A Glutamyl-tRNA(Gln) amidotransferase subunit D; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: b.38.3.1 c.88.1.1
Probab=24.82 E-value=1.3e+02 Score=28.84 Aligned_cols=73 Identities=19% Similarity=0.092 Sum_probs=47.0
Q ss_pred hHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEeeeecCCCCCC-ccccchhhhH
Q 018458 15 GKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVS-TSVVEPYNSV 92 (355)
Q Consensus 15 g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~~v~P~~~~~-~~~~~~yN~~ 92 (355)
..+.+..+.+.|++.+++ ..+||.|+|+.. |= -.++..+..+-+..+|-.+++=+-.|....+ +...-.++++
T Consensus 150 tp~~w~~La~~I~~~~~~--~~DG~VItHGTD--TM-eeTA~~Lsl~l~~~~KPVVlTGAqrP~~~~~sDg~~NL~~Av 223 (438)
T 1zq1_A 150 KPKHWVKIAHEVAKALNS--GDYGVVVAHGTD--TM-GYTAAALSFMLRNLGKPVVLVGAQRSSDRPSSDAAMNLICSV 223 (438)
T ss_dssp CHHHHHHHHHHHHHHHHT--TCSEEEEECCSS--SH-HHHHHHHHHHEESCCSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcc--CCCeEEEecCch--hH-HHHHHHHHHHHhCCCCCEEEeCCCCCCCCCCcchHHHHHHHH
Confidence 456666777777777762 588999999655 42 4566677766555667667777888876533 4333344443
No 49
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=24.42 E-value=67 Score=27.79 Aligned_cols=62 Identities=11% Similarity=-0.030 Sum_probs=20.7
Q ss_pred CCCCcccCcccchHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcc
Q 018458 3 EYSKLCCDDVSVGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKS 69 (355)
Q Consensus 3 ~~~n~a~G~~~~g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~ 69 (355)
+...|..||......-.....+.+.+.+..--.+..=.-+-++|.|+| .++..+...+|...
T Consensus 2 ~~~~Y~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vLDiG~G~G-----~~~~~l~~~~~~~~ 63 (276)
T 3mgg_A 2 SLTEYVHGYSEREALRLSEQAETLEKLLHHDTVYPPGAKVLEAGCGIG-----AQTVILAKNNPDAE 63 (276)
T ss_dssp ---------------------CHHHHHHHTTCCCCTTCEEEETTCTTS-----HHHHHHHHHCTTSE
T ss_pred CccccccCCCHHHHhhHHHHHHHHHHHHhhcccCCCCCeEEEecCCCC-----HHHHHHHHhCCCCE
Confidence 345677777655433333334444444443333333345677877765 23344455566543
No 50
>1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A
Probab=24.19 E-value=57 Score=28.84 Aligned_cols=49 Identities=10% Similarity=0.014 Sum_probs=27.9
Q ss_pred cCcccchHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHh
Q 018458 9 CDDVSVGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERL 61 (355)
Q Consensus 9 ~G~~~~g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l 61 (355)
+|++..-..+.+.+.+.|++..++.....=+.+=||+||+ ++..+.-.|
T Consensus 109 ~gf~~~~~~l~~~~~~~l~~~~~~~p~~~i~~~GHSLGga----lA~l~a~~l 157 (269)
T 1tgl_A 109 KGFLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGA----TALLCALDL 157 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEEeeCHHHH----HHHHHHHHH
Confidence 3555444566677777777777664433334444787754 444444444
No 51
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=24.05 E-value=68 Score=27.75 Aligned_cols=28 Identities=25% Similarity=0.417 Sum_probs=19.8
Q ss_pred cCCCCCCCchHHHHHHhhhhhCCcceEee
Q 018458 45 VGGGTGSGLGSLLLERLSVDYGKKSKLGF 73 (355)
Q Consensus 45 l~GGtGSG~gs~lle~l~deyp~~~~~~~ 73 (355)
+.|||| ++|+.+++.|.++.++..+..+
T Consensus 4 VtGatG-~iG~~l~~~L~~~~~g~~V~~~ 31 (286)
T 2zcu_A 4 ITGATG-QLGHYVIESLMKTVPASQIVAI 31 (286)
T ss_dssp EESTTS-HHHHHHHHHHTTTSCGGGEEEE
T ss_pred EEcCCc-hHHHHHHHHHHhhCCCceEEEE
Confidence 457887 8999999999886444344433
No 52
>1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A
Probab=23.44 E-value=22 Score=31.76 Aligned_cols=49 Identities=12% Similarity=0.087 Sum_probs=29.4
Q ss_pred cCcccchHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHh
Q 018458 9 CDDVSVGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERL 61 (355)
Q Consensus 9 ~G~~~~g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l 61 (355)
+|++..-..+.+++.+.|++..++.....=+..=|||||+ ++..+.-.+
T Consensus 110 ~Gf~~~~~~~~~~~~~~l~~~~~~~~~~~i~vtGHSLGGa----lA~l~a~~~ 158 (269)
T 1lgy_A 110 AGFLSSYEQVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGA----QALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHH----HHHHHHHHH
T ss_pred eehhhhHHHHHHHHHHHHHHHHHHCCCCeEEEeccChHHH----HHHHHHHHH
Confidence 4555444566777777888877766544445555888754 344444444
No 53
>3ff5_A PEX14P, peroxisomal biogenesis factor 14; protein import, peroxin, 3 helices bundle, protein transport; HET: DPW; 1.80A {Rattus norvegicus}
Probab=23.04 E-value=20 Score=24.07 Aligned_cols=22 Identities=27% Similarity=0.499 Sum_probs=15.9
Q ss_pred cccceeeecccCCCchhhHHHHHHh
Q 018458 304 AKRAFVHWYVGEGMEEGEFSEARED 328 (355)
Q Consensus 304 ~~kAylH~Y~~~Gmee~eF~ea~~~ 328 (355)
+|.+|| ..-|++++|+.+|+.+
T Consensus 32 ~K~~FL---~sKGLt~~EI~~Al~r 53 (54)
T 3ff5_A 32 TRRAFL---KKKGLTDEEIDLAFQQ 53 (54)
T ss_dssp HHHHHH---HHTTCCHHHHHHHHHH
T ss_pred HHHHHH---HHcCCCHHHHHHHHHc
Confidence 445555 3349999999999864
No 54
>1k2d_P MBP peptide, myelin basic protein peptide with 8 residue linke; MHC class II, I-AU, H-2U, autoimmune disease; HET: NDG NAG; 2.20A {Mus musculus}
Probab=22.99 E-value=21 Score=19.45 Aligned_cols=8 Identities=88% Similarity=1.298 Sum_probs=4.8
Q ss_pred CCCCCchH
Q 018458 48 GTGSGLGS 55 (355)
Q Consensus 48 GtGSG~gs 55 (355)
|||||-|+
T Consensus 16 g~gsgsgs 23 (26)
T 1k2d_P 16 GTGSGSGS 23 (26)
T ss_pred cCCCCcCc
Confidence 56666655
No 55
>1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A*
Probab=22.27 E-value=46 Score=29.49 Aligned_cols=51 Identities=12% Similarity=0.111 Sum_probs=29.9
Q ss_pred cCcccchHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhh
Q 018458 9 CDDVSVGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSV 63 (355)
Q Consensus 9 ~G~~~~g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~d 63 (355)
+|++..-+.+.+++.+.+++..++.....=+.+=||+||+ ++...+..++.
T Consensus 111 ~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~GHSLGGa----lA~l~a~~l~~ 161 (269)
T 1tib_A 111 DGFTSSWRSVADTLRQKVEDAVREHPDYRVVFTGHSLGGA----LATVAGADLRG 161 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHH----HHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEecCChHHH----HHHHHHHHHHh
Confidence 4555444566677777777777765444445555777643 44555555544
No 56
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis}
Probab=22.19 E-value=3.3e+02 Score=26.10 Aligned_cols=44 Identities=20% Similarity=0.281 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhh
Q 018458 17 EIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLS 62 (355)
Q Consensus 17 ~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~ 62 (355)
++.+...+.|...+.. .+.++.|..+.+.|+|+.+.+.+++.|-
T Consensus 175 d~~~~Y~~~l~~~~~~--~~~~lkivvD~~nG~~~~~~~~ll~~lG 218 (469)
T 3pdk_A 175 EGGQKYLQYIKQTVEE--DFSGLHIALDCAHGATSSLAPYLFADLE 218 (469)
T ss_dssp HHHHHHHHHHHTTCSS--CCTTCEEEEECTTSTTTTHHHHHHHHTT
T ss_pred cHHHHHHHHHHHhcCc--ccCCCEEEEECCCchHHHHHHHHHHHcC
Confidence 4444445555544432 4689999999999999888888888764
No 57
>2plg_A TLL0839 protein; hypothetical, uncharacterized, DUF1821, NYSGXRC, PSI-2, structural genomics, protein structure initiative; 2.60A {Synechococcus elongatus} SCOP: d.198.1.2
Probab=20.54 E-value=60 Score=26.87 Aligned_cols=34 Identities=24% Similarity=0.293 Sum_probs=27.9
Q ss_pred cccCCCchhhHHHHHHhHHHHHHHHHHHcccCCC
Q 018458 312 YVGEGMEEGEFSEAREDLAALEKDYEEVGAESAE 345 (355)
Q Consensus 312 Y~~~Gmee~eF~ea~~~l~~l~~~Y~~~~~~~~~ 345 (355)
-.-.+|+.+||..|..+|..+.++|.+...++.+
T Consensus 121 r~ls~Ld~~E~~~aIt~V~~lAD~~Dd~L~~~fg 154 (163)
T 2plg_A 121 RTLGGITAGEISRLITIVATLADDYDDALRAEFK 154 (163)
T ss_dssp EECTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3446899999999999999999999876655443
No 58
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=20.28 E-value=54 Score=28.85 Aligned_cols=29 Identities=24% Similarity=0.455 Sum_probs=20.9
Q ss_pred cCCCCCCCchHHHHHHhhhhhCCcceEeee
Q 018458 45 VGGGTGSGLGSLLLERLSVDYGKKSKLGFT 74 (355)
Q Consensus 45 l~GGtGSG~gs~lle~l~deyp~~~~~~~~ 74 (355)
+.|||| ++|+.+++.|.+.++...+..+.
T Consensus 7 VtGatG-~iG~~l~~~L~~~~~g~~V~~~~ 35 (312)
T 2yy7_A 7 IIGACG-QIGTELTQKLRKLYGTENVIASD 35 (312)
T ss_dssp EETTTS-HHHHHHHHHHHHHHCGGGEEEEE
T ss_pred EECCcc-HHHHHHHHHHHHhCCCCEEEEEc
Confidence 458887 89999999998875444444443
No 59
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=20.18 E-value=1.9e+02 Score=27.78 Aligned_cols=72 Identities=15% Similarity=-0.018 Sum_probs=45.7
Q ss_pred hHHHHHHHHHHHHhhhhhccCccceeEEEecCCCCCCCchHHHHHHhhhhhCCcceEeeeecCCCCCC-ccccchhhhH
Q 018458 15 GKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVS-TSVVEPYNSV 92 (355)
Q Consensus 15 g~~~~~~~~d~iR~~~E~cD~lqgf~~~~sl~GGtGSG~gs~lle~l~deyp~~~~~~~~v~P~~~~~-~~~~~~yN~~ 92 (355)
..+.+..+.+.|++.+++ ..+||.|+|+.. |= -.++..+..+- ..+|-.+++=+-.|....+ +...-.++++
T Consensus 149 tp~~w~~La~~I~~~~~~--~~DG~VItHGTD--TM-eeTA~~Lsl~l-~~~KPVVlTGAqrP~~~~~sDg~~NL~~Av 221 (435)
T 2d6f_A 149 KPEYWVETARAVYGEIKD--GADGVVVAHGTD--TM-HYTSAALSFML-RTPVPVVFTGAQRSSDRPSSDASLNIQCSV 221 (435)
T ss_dssp CHHHHHHHHHHHHHHHHT--TCSEEEEECCTT--TH-HHHHHHHHHHE-ECSSCEEEECCSSCTTSTTCTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcc--CCCeEEEEcCcc--hH-HHHHHHHHHHh-CCCCCEEEECCCCCCCCCCcchHHHHHHHH
Confidence 456667777777777762 588999999654 42 45666666654 5566666777788876533 4333344443
Done!