BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018459
(355 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LHA4|VA0D2_ARATH V-type proton ATPase subunit d2 OS=Arabidopsis thaliana GN=VHA-D2
PE=2 SV=1
Length = 351
Score = 617 bits (1592), Expect = e-176, Method: Compositional matrix adjust.
Identities = 292/313 (93%), Positives = 306/313 (97%)
Query: 1 MYGFEAMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQN 60
MYGFEA+TFNIHGGYLEAIVRG+RAGLLT ADYNNLCQCE LDDIKMHLSAT+YGPYLQN
Sbjct: 1 MYGFEALTFNIHGGYLEAIVRGHRAGLLTTADYNNLCQCENLDDIKMHLSATKYGPYLQN 60
Query: 61 EPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHER 120
EPSPLHTTTIVEKCTLKLVD+YKHMLCQATEP+STFLEYI YGHMIDNVVLIVTGTLHER
Sbjct: 61 EPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPMSTFLEYIRYGHMIDNVVLIVTGTLHER 120
Query: 121 DVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEI 180
DVQEL+EKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSEC+TSEDLDDMNIEI
Sbjct: 121 DVQELIEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECLTSEDLDDMNIEI 180
Query: 181 MRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKL 240
MRNTLYKAYLEDFY FCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTR+DR+KL
Sbjct: 181 MRNTLYKAYLEDFYNFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTREDRKKL 240
Query: 241 YSNFGLLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKR 300
YSNFGLLYPYGHEELA+CEDIDQVRGVMEKYPPYQ+IFSK+SYGESQMLDKAFYEEEV+R
Sbjct: 241 YSNFGLLYPYGHEELAICEDIDQVRGVMEKYPPYQAIFSKMSYGESQMLDKAFYEEEVRR 300
Query: 301 LCLAFEQQVSISV 313
LCLAFEQQ +V
Sbjct: 301 LCLAFEQQFHYAV 313
>sp|Q9LJI5|VA0D1_ARATH V-type proton ATPase subunit d1 OS=Arabidopsis thaliana GN=VHA-D1
PE=2 SV=1
Length = 351
Score = 617 bits (1590), Expect = e-176, Method: Compositional matrix adjust.
Identities = 292/313 (93%), Positives = 306/313 (97%)
Query: 1 MYGFEAMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQN 60
MYGFEA+TFNIHGGYLEAIVRG+RAGLLT ADYNNLCQCE LDDIKMHLSAT+YG YLQN
Sbjct: 1 MYGFEALTFNIHGGYLEAIVRGHRAGLLTTADYNNLCQCENLDDIKMHLSATKYGSYLQN 60
Query: 61 EPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHER 120
EPSPLHTTTIVEKCTLKLVD+YKHMLCQATEP+STFLEYI YGHMIDNVVLIVTGTLHER
Sbjct: 61 EPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPMSTFLEYIRYGHMIDNVVLIVTGTLHER 120
Query: 121 DVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEI 180
DVQEL+EKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSEC+TSEDLDDMNIEI
Sbjct: 121 DVQELIEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECLTSEDLDDMNIEI 180
Query: 181 MRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKL 240
MRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTR+DR+KL
Sbjct: 181 MRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTREDRKKL 240
Query: 241 YSNFGLLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKR 300
YSNFGLLYPYGHEELA+CEDIDQVRGVMEKYPPYQ+IFSK+SYGESQMLDKAFYEEEV+R
Sbjct: 241 YSNFGLLYPYGHEELAICEDIDQVRGVMEKYPPYQAIFSKMSYGESQMLDKAFYEEEVRR 300
Query: 301 LCLAFEQQVSISV 313
LCLAFEQQ +V
Sbjct: 301 LCLAFEQQFHYAV 313
>sp|Q8RU33|VA0D_ORYSJ Probable V-type proton ATPase subunit d OS=Oryza sativa subsp.
japonica GN=Os01g0587000 PE=2 SV=1
Length = 351
Score = 606 bits (1562), Expect = e-173, Method: Compositional matrix adjust.
Identities = 285/313 (91%), Positives = 304/313 (97%)
Query: 1 MYGFEAMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQN 60
MYG+E ++FNIH G+LEAIVRG R+GLLTAADYNNLCQCE LDD+KMHL+ATEYGPYLQN
Sbjct: 1 MYGWEMLSFNIHDGFLEAIVRGNRSGLLTAADYNNLCQCENLDDVKMHLTATEYGPYLQN 60
Query: 61 EPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHER 120
EPSPLHTTTIVEKCTLKLVDEYKHM+CQATEPLSTFL+YITYGHMIDNVVLIVTGTLHER
Sbjct: 61 EPSPLHTTTIVEKCTLKLVDEYKHMMCQATEPLSTFLQYITYGHMIDNVVLIVTGTLHER 120
Query: 121 DVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEI 180
DV ELLEKCHPLGMFDSIA+LAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEI
Sbjct: 121 DVNELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEI 180
Query: 181 MRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKL 240
MRNTLYKAYLEDFYKFC+KLGGATAEIM DLL+FEADRRAVNITINSIGTELTRDDRRKL
Sbjct: 181 MRNTLYKAYLEDFYKFCEKLGGATAEIMCDLLSFEADRRAVNITINSIGTELTRDDRRKL 240
Query: 241 YSNFGLLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKR 300
YSNFGLLYPYGHEELAVCED+DQVRGVMEKYPPYQ+IF+K+SYGESQMLDKAFYEEEV+R
Sbjct: 241 YSNFGLLYPYGHEELAVCEDVDQVRGVMEKYPPYQAIFAKISYGESQMLDKAFYEEEVRR 300
Query: 301 LCLAFEQQVSISV 313
LCL+FEQQ +V
Sbjct: 301 LCLSFEQQFHYAV 313
>sp|P54641|VA0D_DICDI V-type proton ATPase subunit d OS=Dictyostelium discoideum
GN=vatD-1 PE=1 SV=2
Length = 356
Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/307 (59%), Positives = 237/307 (77%), Gaps = 2/307 (0%)
Query: 8 TFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHT 67
TFN GYLEAI+RG++ G+L+ ADYNNLCQC+ L+D+KMH +T+YG +L EPSP+HT
Sbjct: 14 TFNKDDGYLEAILRGFKKGILSRADYNNLCQCDNLEDMKMHFISTDYGDFLAGEPSPIHT 73
Query: 68 TTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLE 127
TTI EK T KLV E+ H+ QA EPLSTF+++I+YG+MIDNVVL++TGTLHERD+ EL++
Sbjct: 74 TTIAEKATGKLVSEFNHIRNQAVEPLSTFMDFISYGYMIDNVVLLITGTLHERDISELVD 133
Query: 128 KCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYK 187
KCHPLG+F S+ATL+V N+ +LY VL+DTPLAPY C++ EDLD+MNIEI+RNTLYK
Sbjct: 134 KCHPLGLFKSMATLSVVHNVADLYNNVLIDTPLAPYIQGCLSEEDLDEMNIEIIRNTLYK 193
Query: 188 AYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIG-TELTRDDRRKLYSNFGL 246
AYLEDFY +C+ LGG T IMSD+L FEADRR++NITINS G TEL++DDR KLY + GL
Sbjct: 194 AYLEDFYNYCKYLGGQTELIMSDILKFEADRRSINITINSFGATELSKDDREKLYPSLGL 253
Query: 247 LYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKRLCLAFE 306
LYP G +L ED+DQVRG++E Y Y++ FS + L+ +F+E EV +AFE
Sbjct: 254 LYPEGTSKLGKAEDVDQVRGILEVYSTYRNFFSD-GVNNEKSLEDSFFEHEVHLNRMAFE 312
Query: 307 QQVSISV 313
Q V
Sbjct: 313 DQYGYGV 319
>sp|Q9W4P5|VA0D1_DROME V-type proton ATPase subunit d 1 OS=Drosophila melanogaster
GN=VhaAC39-1 PE=2 SV=1
Length = 350
Score = 351 bits (900), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 172/310 (55%), Positives = 223/310 (71%), Gaps = 3/310 (0%)
Query: 6 AMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPL 65
FNI GYLE + RG++ G+L ADY NL QCETL+D+K+HL T+YG +L NEPSPL
Sbjct: 5 GFMFNIDNGYLEGLCRGFKCGILKQADYLNLVQCETLEDLKLHLQGTDYGSFLANEPSPL 64
Query: 66 HTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQEL 125
+ I +K KLV E++HM A EPLS FL++ITYG+MIDN++L++TGTLH+R + EL
Sbjct: 65 SVSVIDDKLREKLVIEFQHMRNHAVEPLSNFLDFITYGYMIDNIILLITGTLHQRPISEL 124
Query: 126 LEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTL 185
+ KCHPLG F+ + + VA ELY VLVDTPLAP+F +CI+ +DLD+MNIEI+RNTL
Sbjct: 125 IPKCHPLGSFEQMEAIHVASTPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTL 184
Query: 186 YKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFG 245
YKAYLE FY FC+ +GGATA++M ++LAFEADRRA+ ITINS GTEL++DDR KLY N G
Sbjct: 185 YKAYLEAFYNFCKNMGGATADVMCEILAFEADRRAIIITINSFGTELSKDDRAKLYPNCG 244
Query: 246 LLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIF--SKLSYGESQMLDKAFYEEEVKRLCL 303
+YP G LA +D +QV+ V E Y Y ++F S + G+ + DK F+E EVK
Sbjct: 245 KMYPDGLAALARADDYEQVKTVAEYYAEYAALFDGSGNNPGDKTLEDK-FFEHEVKLDVY 303
Query: 304 AFEQQVSISV 313
AF QQ V
Sbjct: 304 AFLQQFHFGV 313
>sp|Q25531|VA0D_MANSE V-type proton ATPase subunit d OS=Manduca sexta PE=2 SV=1
Length = 348
Score = 340 bits (871), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 166/307 (54%), Positives = 220/307 (71%), Gaps = 3/307 (0%)
Query: 9 FNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTT 68
FNI GYLE + RG++ G+L +DY NL QCETL+D+K+HL T+YG +L NEPSPL +
Sbjct: 6 FNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVS 65
Query: 69 TIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEK 128
TI +K KLV E++H+ + EPLSTFL++ITY +MIDN++L++TGTLH+R + EL+ K
Sbjct: 66 TIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPK 125
Query: 129 CHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKA 188
CHPLG F+ + + VA ELY VLVDTPLAP+F +CI+ +DLD+MNIEI+RNTLYKA
Sbjct: 126 CHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKA 185
Query: 189 YLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLY 248
YLE FY FC+++GG TA++M ++LAFEADRRA+ ITINS GTEL++DDR KLY G L
Sbjct: 186 YLEAFYDFCKQIGGTTADVMCEILAFEADRRAIIITINSFGTELSKDDRAKLYPRCGKLN 245
Query: 249 PYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKL--SYGESQMLDKAFYEEEVKRLCLAFE 306
P G LA +D +QV+ V E Y Y ++F + G+ + DK F+E EV AF
Sbjct: 246 PDGLAALARADDYEQVKAVAEYYAEYSALFEGAGNNVGDKTLEDK-FFEHEVNLNVHAFL 304
Query: 307 QQVSISV 313
QQ V
Sbjct: 305 QQFHFGV 311
>sp|Q5ZHL0|VA0D2_CHICK V-type proton ATPase subunit d 2 OS=Gallus gallus GN=ATP6V0D2 PE=2
SV=1
Length = 351
Score = 339 bits (869), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 162/314 (51%), Positives = 220/314 (70%), Gaps = 1/314 (0%)
Query: 1 MYGFEAMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQN 60
M G+ FN+ GYLE +VRG++AG+LT+ADY NL QCETL+D+K+HL T+YG +L N
Sbjct: 1 MPGYSEFYFNVDHGYLEGLVRGFKAGILTSADYVNLAQCETLEDLKLHLQTTDYGNFLAN 60
Query: 61 EPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHER 120
E PL +TI +K KL+ E+ + A EPL+TFL +ITY +MIDN++L++TGTLH+R
Sbjct: 61 ESGPLTISTIDDKLKTKLLTEFHYFRNHAFEPLTTFLNFITYSYMIDNIILLITGTLHQR 120
Query: 121 DVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEI 180
+ EL+ KCHPLG F+ + +++A N EL+ +LVDTPLA +F +C++ DLD+MN+EI
Sbjct: 121 PIAELVPKCHPLGSFEQMEAVSIASNPTELFNAILVDTPLAAFFQDCLSENDLDEMNVEI 180
Query: 181 MRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKL 240
MRN LYK+YLE FYKFC+K GG TAEIM +L FEADRRA ITINS GTEL+++DR KL
Sbjct: 181 MRNKLYKSYLEAFYKFCEKQGGTTAEIMKPILEFEADRRAFIITINSFGTELSKEDREKL 240
Query: 241 YSNFGLLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQ-MLDKAFYEEEVK 299
Y G LYP G LA +D +QV+ V + Y Y+++F + + L+ AF+E E+K
Sbjct: 241 YPTCGKLYPEGLHLLANADDYEQVKCVADYYAEYKAVFEGVGNDSGEKTLEDAFFEHEIK 300
Query: 300 RLCLAFEQQVSISV 313
LAF Q V
Sbjct: 301 LNVLAFNNQFHFGV 314
>sp|P51863|VA0D1_MOUSE V-type proton ATPase subunit d 1 OS=Mus musculus GN=Atp6v0d1 PE=1
SV=2
Length = 351
Score = 337 bits (865), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 166/314 (52%), Positives = 222/314 (70%), Gaps = 1/314 (0%)
Query: 1 MYGFEAMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQN 60
M F + FN+ GYLE +VRG +AG+L+ ADY NL QCETL+D+K+HL +T+YG +L N
Sbjct: 1 MSFFPELYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLAN 60
Query: 61 EPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHER 120
E SPL + I +K K+V E++HM A EPL++FL++ITY +MIDNV+L++TGTLH+R
Sbjct: 61 EASPLTVSVIDDKLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQR 120
Query: 121 DVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEI 180
+ EL+ KCHPLG F+ + + +AQ ELY +LVDTPLA +F +CI+ +DLD+MNIEI
Sbjct: 121 SIAELVPKCHPLGSFEQMEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEI 180
Query: 181 MRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKL 240
+RNTLYKAYLE FYKFC LGG TA+ M +L FEADRRA ITINS GTEL+++DR KL
Sbjct: 181 IRNTLYKAYLESFYKFCTLLGGTTADAMCPILEFEADRRAFIITINSFGTELSKEDRAKL 240
Query: 241 YSNFGLLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKL-SYGESQMLDKAFYEEEVK 299
+ + G LYP G +LA +D +QV+ V + YP Y+ +F S + L+ F+E EVK
Sbjct: 241 FPHCGRLYPEGLAQLARADDYEQVKNVADYYPEYKLLFEGAGSNPGDKTLEDRFFEHEVK 300
Query: 300 RLCLAFEQQVSISV 313
LAF Q V
Sbjct: 301 LNKLAFLNQFHFGV 314
>sp|Q5R6I1|VA0D1_PONAB V-type proton ATPase subunit d 1 OS=Pongo abelii GN=ATP6V0D1 PE=2
SV=1
Length = 351
Score = 336 bits (862), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 165/314 (52%), Positives = 222/314 (70%), Gaps = 1/314 (0%)
Query: 1 MYGFEAMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQN 60
M F + FN+ GYLE +VRG +AG+L+ ADY NL QCETL+D+K+HL +T+YG +L N
Sbjct: 1 MSFFPELYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLAN 60
Query: 61 EPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHER 120
E SPL + I ++ K+V E++HM A EPL++FL++ITY +MIDNV+L++TGTLH+R
Sbjct: 61 EASPLTVSVIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQR 120
Query: 121 DVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEI 180
+ EL+ KCHPLG F+ + + +AQ ELY +LVDTPLA +F +CI+ +DLD+MNIEI
Sbjct: 121 SIAELVPKCHPLGSFEQMEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEI 180
Query: 181 MRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKL 240
+RNTLYKAYLE FYKFC LGG TA+ M +L FEADRRA ITINS GTEL+++DR KL
Sbjct: 181 IRNTLYKAYLESFYKFCTLLGGTTADAMCPILEFEADRRAFIITINSFGTELSKEDRAKL 240
Query: 241 YSNFGLLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKL-SYGESQMLDKAFYEEEVK 299
+ + G LYP G +LA +D +QV+ V + YP Y+ +F S + L+ F+E EVK
Sbjct: 241 FPHCGRLYPEGLAQLARADDYEQVKNVADYYPEYKLLFEGAGSNPGDKTLEDRFFEHEVK 300
Query: 300 RLCLAFEQQVSISV 313
LAF Q V
Sbjct: 301 LNKLAFLNQFHFGV 314
>sp|P61421|VA0D1_HUMAN V-type proton ATPase subunit d 1 OS=Homo sapiens GN=ATP6V0D1 PE=1
SV=1
Length = 351
Score = 336 bits (862), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 165/314 (52%), Positives = 222/314 (70%), Gaps = 1/314 (0%)
Query: 1 MYGFEAMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQN 60
M F + FN+ GYLE +VRG +AG+L+ ADY NL QCETL+D+K+HL +T+YG +L N
Sbjct: 1 MSFFPELYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLAN 60
Query: 61 EPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHER 120
E SPL + I ++ K+V E++HM A EPL++FL++ITY +MIDNV+L++TGTLH+R
Sbjct: 61 EASPLTVSVIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQR 120
Query: 121 DVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEI 180
+ EL+ KCHPLG F+ + + +AQ ELY +LVDTPLA +F +CI+ +DLD+MNIEI
Sbjct: 121 SIAELVPKCHPLGSFEQMEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEI 180
Query: 181 MRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKL 240
+RNTLYKAYLE FYKFC LGG TA+ M +L FEADRRA ITINS GTEL+++DR KL
Sbjct: 181 IRNTLYKAYLESFYKFCTLLGGTTADAMCPILEFEADRRAFIITINSFGTELSKEDRAKL 240
Query: 241 YSNFGLLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKL-SYGESQMLDKAFYEEEVK 299
+ + G LYP G +LA +D +QV+ V + YP Y+ +F S + L+ F+E EVK
Sbjct: 241 FPHCGRLYPEGLAQLARADDYEQVKNVADYYPEYKLLFEGAGSNPGDKTLEDRFFEHEVK 300
Query: 300 RLCLAFEQQVSISV 313
LAF Q V
Sbjct: 301 LNKLAFLNQFHFGV 314
>sp|P61420|VA0D1_BOVIN V-type proton ATPase subunit d 1 OS=Bos taurus GN=ATP6V0D1 PE=1
SV=1
Length = 351
Score = 336 bits (862), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 165/314 (52%), Positives = 222/314 (70%), Gaps = 1/314 (0%)
Query: 1 MYGFEAMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQN 60
M F + FN+ GYLE +VRG +AG+L+ ADY NL QCETL+D+K+HL +T+YG +L N
Sbjct: 1 MSFFPELYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLAN 60
Query: 61 EPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHER 120
E SPL + I ++ K+V E++HM A EPL++FL++ITY +MIDNV+L++TGTLH+R
Sbjct: 61 EASPLTVSVIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQR 120
Query: 121 DVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEI 180
+ EL+ KCHPLG F+ + + +AQ ELY +LVDTPLA +F +CI+ +DLD+MNIEI
Sbjct: 121 SIAELVPKCHPLGSFEQMEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEI 180
Query: 181 MRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKL 240
+RNTLYKAYLE FYKFC LGG TA+ M +L FEADRRA ITINS GTEL+++DR KL
Sbjct: 181 IRNTLYKAYLESFYKFCTLLGGTTADAMCPILEFEADRRAFIITINSFGTELSKEDRAKL 240
Query: 241 YSNFGLLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKL-SYGESQMLDKAFYEEEVK 299
+ + G LYP G +LA +D +QV+ V + YP Y+ +F S + L+ F+E EVK
Sbjct: 241 FPHCGRLYPEGLAQLARADDYEQVKNVADYYPEYKLLFEGAGSNPGDKTLEDRFFEHEVK 300
Query: 300 RLCLAFEQQVSISV 313
LAF Q V
Sbjct: 301 LNKLAFLNQFHFGV 314
>sp|Q6P335|VA0D2_XENTR V-type proton ATPase subunit d 2 OS=Xenopus tropicalis GN=atp6v0d2
PE=2 SV=1
Length = 350
Score = 321 bits (823), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 152/306 (49%), Positives = 210/306 (68%), Gaps = 1/306 (0%)
Query: 9 FNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTT 68
FN+ GYLE +VRG++ G+L + DY NL QCETL+D+K+HL +T+YG +L NE L +
Sbjct: 8 FNVDSGYLEGLVRGFKGGILRSTDYLNLAQCETLEDLKLHLQSTDYGSFLANETRQLTVS 67
Query: 69 TIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEK 128
I ++ KL+ E+ + A EPL+TFL++ITY +MIDN++L++TGTLH+R + EL+ K
Sbjct: 68 IIDQRLKDKLMAEFHYFRNHAFEPLATFLDFITYSYMIDNIILLITGTLHQRPISELVPK 127
Query: 129 CHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKA 188
CHPLG F+ + + +AQ EL+ ++VDTPLA +F +C++ D+D+MNIEIMRN LYK+
Sbjct: 128 CHPLGSFEQMEAVNIAQTPAELFNAIIVDTPLADFFQDCLSENDMDEMNIEIMRNKLYKS 187
Query: 189 YLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLY 248
YLE FYKFC+KLGG T EIM +L FEADRRA ITINS GTEL +++R KLY G L+
Sbjct: 188 YLEAFYKFCKKLGGTTEEIMCPILEFEADRRAFVITINSFGTELNKEEREKLYPTCGRLF 247
Query: 249 PYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQ-MLDKAFYEEEVKRLCLAFEQ 307
P G L +D DQV+ E Y Y+++F + G + L+ F+E EVK LAF
Sbjct: 248 PEGLRMLGNADDQDQVKTTAEYYAEYKALFEGVGIGTGEKTLEDKFFEHEVKMNVLAFNN 307
Query: 308 QVSISV 313
Q V
Sbjct: 308 QFHFGV 313
>sp|P53659|VA0D_NEUCR V-type proton ATPase subunit d OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=vma-6 PE=3 SV=1
Length = 364
Score = 310 bits (793), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/327 (46%), Positives = 217/327 (66%), Gaps = 19/327 (5%)
Query: 5 EAMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSP 64
E + FN++ GY+E IVRGYR LLT+ +Y N+ QCE++DD+K+ L YG +L + P
Sbjct: 2 EGLLFNVNNGYIEGIVRGYRNSLLTSTNYTNMTQCESIDDLKLQLGPA-YGDFLASLPPK 60
Query: 65 LHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQE 124
T+ + K T KLV E++++ A L+ F++Y+TYG+MIDNV L++TGTLHERD +E
Sbjct: 61 PSTSALAAKTTDKLVSEFRYVRANAAGSLAKFMDYLTYGYMIDNVALLITGTLHERDTRE 120
Query: 125 LLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNT 184
LLE+CHPLG F+++ L VA N+ ELY V+++TPLAPYF ++ +DLD++NIEI+RNT
Sbjct: 121 LLERCHPLGWFETMPVLCVATNIEELYNSVMIETPLAPYFKSSLSLQDLDELNIEIVRNT 180
Query: 185 LYKAYLEDFYKFCQK----LGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKL 240
LYK YLEDFY F G TAE+MS+LL FEADRRA+NIT+NS GTEL++ DR+KL
Sbjct: 181 LYKNYLEDFYHFVNTHPDMAGTPTAEVMSELLEFEADRRAINITLNSFGTELSKADRKKL 240
Query: 241 YSNFGLLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSK--------------LSYGES 286
Y NFG LYP G L+ +D + VR +E Y+S F E
Sbjct: 241 YPNFGQLYPEGTLMLSRADDFEGVRLAVEGVADYKSFFDAAGLGGGPSGPGNMGGGGTEG 300
Query: 287 QMLDKAFYEEEVKRLCLAFEQQVSISV 313
+ L+ FY++E++ +AF +Q + ++
Sbjct: 301 KSLEDMFYQKEMEISKMAFTRQFTYAI 327
>sp|O13753|VA0D_SCHPO V-type proton ATPase subunit d OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=vma6 PE=3 SV=1
Length = 343
Score = 308 bits (790), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 151/304 (49%), Positives = 216/304 (71%), Gaps = 4/304 (1%)
Query: 5 EAMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSP 64
+A++FN + GY+EA+VRGY + LL Y+NL QCE+L+D ++ LS+T+YG +L N+ S
Sbjct: 2 DALSFNTNSGYIEALVRGYESALLEQHIYSNLSQCESLEDFRLQLSSTDYGGFLANQ-SK 60
Query: 65 LHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQE 124
L ++ I K T KL+DE+ + QA E LS F++YITY +MIDN++L++TGT++ +D +
Sbjct: 61 LTSSIISAKATEKLLDEFDLIRRQADETLSKFMDYITYAYMIDNIMLLLTGTVNGQDTHD 120
Query: 125 LLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNT 184
LLE+CHPLG F+++ L VA N+ ELY +VL++TPLAPYF +C++++DLD+ +IEI+RNT
Sbjct: 121 LLERCHPLGWFETLPALCVATNVEELYSVVLIETPLAPYFKDCLSADDLDEQHIEIIRNT 180
Query: 185 LYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNF 244
LYKAYLEDFY FC+K+G TA+ M +L FEADRRA+ ITINS GTEL++++R K+Y +F
Sbjct: 181 LYKAYLEDFYNFCKKIGACTADTMLPILEFEADRRAITITINSFGTELSKEERAKMYPSF 240
Query: 245 GLLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKRLCLA 304
G LYP+ LA E+ V Y F + S + LD F E+EV+ LA
Sbjct: 241 GRLYPFSTSILARAENAGDVENACSLVKEYSDFFDQNS---QKSLDDHFNEKEVELNKLA 297
Query: 305 FEQQ 308
F QQ
Sbjct: 298 FLQQ 301
>sp|Q8N8Y2|VA0D2_HUMAN V-type proton ATPase subunit d 2 OS=Homo sapiens GN=ATP6V0D2 PE=2
SV=1
Length = 350
Score = 298 bits (764), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 143/305 (46%), Positives = 203/305 (66%)
Query: 9 FNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTT 68
FN+ GYLE +VRG +A LLT DY NL QCETL+D+K+HL T+YG +L N +PL +
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYINLVQCETLEDLKIHLQTTDYGNFLANHTNPLTVS 68
Query: 69 TIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEK 128
I + +L E+++ + EPLSTFL Y+T +MIDNV+L++ G L ++ V+E+L K
Sbjct: 69 KIDTEMRKRLCGEFEYFRNHSLEPLSTFLTYMTCSYMIDNVILLMNGALQKKSVKEILGK 128
Query: 129 CHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKA 188
CHPLG F + + +A+ +L+ +L++TPLAP+F +C++ LD++NIE++RN LYK+
Sbjct: 129 CHPLGRFTEMEAVNIAETPSDLFNAILIETPLAPFFQDCMSENALDELNIELLRNKLYKS 188
Query: 189 YLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLY 248
YLE FYKFC+ G TAE+M +L FEADRRA IT+NS GTEL+++DR LY FG LY
Sbjct: 189 YLEAFYKFCKNHGDVTAEVMCPILEFEADRRAFIITLNSFGTELSKEDRETLYPTFGKLY 248
Query: 249 PYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKRLCLAFEQQ 308
P G LA ED DQ++ V + Y Y+ +F + + L+ FYE EV+ LAF +Q
Sbjct: 249 PEGLRLLAQAEDFDQMKNVADHYGVYKPLFEAVGGSGGKTLEDVFYEREVQMNVLAFNRQ 308
Query: 309 VSISV 313
V
Sbjct: 309 FHYGV 313
>sp|Q5R7B7|VA0D2_PONAB V-type proton ATPase subunit d 2 OS=Pongo abelii GN=ATP6V0D2 PE=2
SV=2
Length = 350
Score = 295 bits (756), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 141/305 (46%), Positives = 203/305 (66%)
Query: 9 FNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTT 68
FN+ GYLE +VRG +A LLT DY NL QCETL+D+K+HL T+YG +L N+ +PL +
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYINLVQCETLEDLKIHLQTTDYGNFLANQTNPLTVS 68
Query: 69 TIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEK 128
I + +L E+++ + EPLSTFL Y+T +MIDNV+ ++ G L ++ V+E+L K
Sbjct: 69 KIDTEMRKRLCGEFEYFRNHSLEPLSTFLTYMTCSYMIDNVIPLMNGALQKKSVKEILGK 128
Query: 129 CHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKA 188
CHPLG F + + +A+ +L+ +L++TPLAP+F +C++ L+++NIE++RN LYK+
Sbjct: 129 CHPLGRFTEMEAVNIAETPSDLFNAILIETPLAPFFQDCMSENALNELNIELLRNKLYKS 188
Query: 189 YLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLY 248
YLE FYKFC+ G TAE+M +L FEADRRA IT+NS GTEL+++DR LY FG LY
Sbjct: 189 YLEAFYKFCKNHGDVTAEVMCPILEFEADRRAFIITLNSFGTELSKEDRETLYPTFGKLY 248
Query: 249 PYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKRLCLAFEQQ 308
P G LA ED DQ++ V + Y Y+ +F + + L+ FYE EV+ LAF +Q
Sbjct: 249 PEGLRLLAQAEDFDQMKNVADHYGVYKPLFEAVGGSGGKTLEDVFYEREVQMNVLAFNRQ 308
Query: 309 VSISV 313
V
Sbjct: 309 FHYGV 313
>sp|Q80SY3|VA0D2_MOUSE V-type proton ATPase subunit d 2 OS=Mus musculus GN=Atp6v0d2 PE=2
SV=2
Length = 350
Score = 295 bits (754), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 142/305 (46%), Positives = 204/305 (66%)
Query: 9 FNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTT 68
FN+ GYLE +VRG +A LLT DY NL QCETL+D+K+HL T+YG +L NE +PL +
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYVNLVQCETLEDLKIHLQTTDYGNFLANETNPLTVS 68
Query: 69 TIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEK 128
I + KL E+ + + EPLSTFL Y+T +MIDN++L++ G L ++ V+E+L K
Sbjct: 69 KIDTEMRKKLCREFDYFRNHSLEPLSTFLTYMTCSYMIDNIILLMNGALQKKSVKEVLAK 128
Query: 129 CHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKA 188
CHPLG F + + +A+ +L++ VLV+TPLAP+F +C++ LD++NIE++RN LYK+
Sbjct: 129 CHPLGRFTEMEAVNIAETPSDLFKAVLVETPLAPFFQDCMSENTLDELNIELLRNKLYKS 188
Query: 189 YLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLY 248
YLE FYKFC+ G TA++M +L FEADRRA+ IT+NS GTEL+++DR L+ G LY
Sbjct: 189 YLEAFYKFCKDHGDVTADVMCPILEFEADRRALIITLNSFGTELSKEDRETLFPTCGRLY 248
Query: 249 PYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKRLCLAFEQQ 308
P G LA ED +Q++ V + Y Y+ +F + + L+ FYE EV+ LAF +Q
Sbjct: 249 PEGLRLLAQAEDFEQMKRVADNYGVYKPLFDAVGGSGGKTLEDVFYEREVQMNVLAFNRQ 308
Query: 309 VSISV 313
V
Sbjct: 309 FHYGV 313
>sp|Q5FVL0|VA0D2_RAT V-type proton ATPase subunit d 2 OS=Rattus norvegicus GN=Atp6v0d2
PE=2 SV=1
Length = 350
Score = 293 bits (750), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 141/305 (46%), Positives = 203/305 (66%)
Query: 9 FNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTT 68
FN+ GYLE +VRG +A LLT DY NL QCETL+D+K+HL T+YG +L +E +PL +
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYVNLVQCETLEDLKIHLQTTDYGNFLAHETNPLTVS 68
Query: 69 TIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEK 128
I + KL E+ + + EPLSTF Y+T +MIDN++L++ G L ++ V+E+L K
Sbjct: 69 KIDTEMRKKLCREFDYFRNHSLEPLSTFFTYMTCSYMIDNIILLMNGALQKKSVKEVLAK 128
Query: 129 CHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKA 188
CHPLG F + + +A++ EL++ VLV+TPLAP+F +C++ LD++NIE++RN LYK+
Sbjct: 129 CHPLGRFTEMEAVNIAESASELFKAVLVETPLAPFFQDCMSENTLDELNIELLRNKLYKS 188
Query: 189 YLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLY 248
YLE FYKFC+ G TAE+M +L FEADRRA+ IT+NS GTEL+++DR L+ G LY
Sbjct: 189 YLEAFYKFCKDHGDVTAEVMCPILEFEADRRALIITLNSFGTELSKEDRETLFPTCGKLY 248
Query: 249 PYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKRLCLAFEQQ 308
P G LA ED + ++ V + Y Y+ +F + + L+ FYE EV+ LAF +Q
Sbjct: 249 PEGLRLLAQAEDFEHMKRVADNYGVYKPLFDAVGGSGGKTLEDVFYEREVQMNVLAFNRQ 308
Query: 309 VSISV 313
V
Sbjct: 309 FHYGV 313
>sp|Q2KJB6|VA0D2_BOVIN V-type proton ATPase subunit d 2 OS=Bos taurus GN=ATP6V0D2 PE=2
SV=1
Length = 351
Score = 286 bits (732), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 141/308 (45%), Positives = 201/308 (65%), Gaps = 1/308 (0%)
Query: 7 MTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLH 66
+ FN GYLE +VRG +AGLLT DY NL QCE L+D+K+HL T+YG +L N+ +PL
Sbjct: 7 LNFNADHGYLEGLVRGCKAGLLTRRDYVNLVQCENLEDLKIHLQTTDYGNFLANQATPLT 66
Query: 67 TTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELL 126
+ I + KL E+++ + EPLSTF Y+T +MIDNV+L++ G L + V+++L
Sbjct: 67 VSVIDTEMRKKLCREFEYFRNHSLEPLSTFFTYMTCSYMIDNVILLMNGALQNKPVKDVL 126
Query: 127 EKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLY 186
KCHPLG F + + +A+ +L+ +LV+TPLAP+F +C + LD++NIEI+RN LY
Sbjct: 127 VKCHPLGHFTEMEAVNIAETPSDLFNAILVETPLAPFFQDCTSENALDELNIEILRNKLY 186
Query: 187 KAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGL 246
K+Y+E FYKFC+ G TAE+M +L FEADRRA IT+NS GTEL+++DR LY G
Sbjct: 187 KSYIEAFYKFCKNHGDVTAEVMCPILEFEADRRAFIITLNSFGTELSKEDRETLYPTCGK 246
Query: 247 LYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGE-SQMLDKAFYEEEVKRLCLAF 305
L+P G LA ED +Q++ V + Y Y+ +F +S + L+ FYE EV+ LAF
Sbjct: 247 LHPEGLRLLAQAEDFEQMKRVADSYGVYKPLFEAVSDSSGGKTLEDVFYEREVQMNVLAF 306
Query: 306 EQQVSISV 313
+Q V
Sbjct: 307 NRQFHYGV 314
>sp|P32366|VA0D_YEAST V-type proton ATPase subunit d OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=VMA6 PE=1 SV=2
Length = 345
Score = 273 bits (699), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 142/318 (44%), Positives = 207/318 (65%), Gaps = 10/318 (3%)
Query: 5 EAMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSP 64
E + FNI G++E +VRGYR GLL+ Y NL QC+TL+D+K+ LS+T+YG +L + S
Sbjct: 2 EGVYFNIDNGFIEGVVRGYRNGLLSNNQYINLTQCDTLEDLKLQLSSTDYGNFLSSVSSE 61
Query: 65 LHTTTIVEK-CTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQ 123
TT+++++ + KL E+ ++ Q++ F++YITYG+MIDNV L++TGT+H+RD
Sbjct: 62 SLTTSLIQEYASSKLYHEFNYIRDQSSGSTRKFMDYITYGYMIDNVALMITGTIHDRDKG 121
Query: 124 ELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECI-TSEDLDDMNIEIMR 182
E+L++CHPLG FD++ TL+VA ++ LY VLVDTPLAPYF C T+E+LDDMNIEI+R
Sbjct: 122 EILQRCHPLGWFDTLPTLSVATDLESLYETVLVDTPLAPYFKNCFDTAEELDDMNIEIIR 181
Query: 183 NTLYKAYLEDFYKFC-QKLGGATAEIMSDLLAFEADRRAVNITINSI-GTELTRDDRRKL 240
N LYKAYLEDFY F +++ E M LL FEADRR++NI +NS+ +++ D + L
Sbjct: 182 NKLYKAYLEDFYNFVTEEIPEPAKECMQTLLGFEADRRSINIALNSLQSSDIDPDLKSDL 241
Query: 241 YSNFGLLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKR 300
N G LYP LA +D + VR + Y+ E+ L+ FY+ E++
Sbjct: 242 LPNIGKLYPLATFHLAQAQDFEGVRAALANVYEYRGFL------ETGNLEDHFYQLEMEL 295
Query: 301 LCLAFEQQVSISVKCSCL 318
AF QQ +IS + +
Sbjct: 296 CRDAFTQQFAISTVWAWM 313
>sp|Q9VCQ3|VA0D2_DROME Probable V-type proton ATPase subunit d 2 OS=Drosophila
melanogaster GN=VhaAC39-2 PE=2 SV=1
Length = 350
Score = 234 bits (597), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 119/306 (38%), Positives = 183/306 (59%), Gaps = 4/306 (1%)
Query: 6 AMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPL 65
+M FN GYLEA+ RG++ G+L +DY NL QCE+L+D+ + + T+YG E S
Sbjct: 2 SMIFNTEYGYLEALTRGFKNGMLKHSDYLNLTQCESLEDVMISIQGTDYGLIFGGEQSA- 60
Query: 66 HTTTIVEKCTL-KLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQE 124
+ ++E+C +L+ +Y ++ +TEPL+TF+E+I Y MIDNV L+V G + R ++
Sbjct: 61 PSVEVIERCLRDRLLQQYYYIRSHSTEPLTTFMEFIRYPFMIDNVALLVAGLNNHRSMKR 120
Query: 125 LLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNT 184
LL CHPLG FD + + VA N EL+ VL+DTP+A + + E L +++EI+R
Sbjct: 121 LLRMCHPLGEFDQLGAIEVASNSAELFDAVLIDTPIARFVPRDLPMESLRYLDVEIVRAH 180
Query: 185 LYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNF 244
LY+AYLE FY +C +LGG TA +M++LL+FEADRR + I +N+IG+++ +R K++
Sbjct: 181 LYRAYLEKFYAYCSQLGGNTANVMTNLLSFEADRRTITIAVNAIGSDIIPKERLKMFPTC 240
Query: 245 GLLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQM--LDKAFYEEEVKRLC 302
G L ++ D D++R V + Y +F L M L+ F E K+
Sbjct: 241 GYLPKIALASMSTLNDTDKIRDVCNVFDGYGKMFDNLERDSDGMITLEDRFLMMEAKKNV 300
Query: 303 LAFEQQ 308
F QQ
Sbjct: 301 QTFLQQ 306
>sp|Q9UXU5|VATC_PYRAB V-type ATP synthase subunit C OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=atpC PE=3 SV=1
Length = 370
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 109/258 (42%), Gaps = 12/258 (4%)
Query: 14 GYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEK 73
Y A +R A LLT ++ L + ++L + + L T+YG L + S + VE+
Sbjct: 36 SYPNARIRAMEARLLTDQRFSELAESKSLQNFVVSLEDTDYGKRLTSLQS--YNIEDVER 93
Query: 74 C-TLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPL 132
L LVD + M+ + + E + + N++ +V L Q+ + P
Sbjct: 94 ALDLSLVDVIELMVKIMPKRIKGLFEIMLEEWDVRNIINVVKAKLSNMPPQDFI---MPA 150
Query: 133 G-MFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLE 191
G M + +A A+ M E+ LV+++ + E + L+++ ++ LYK +
Sbjct: 151 GKMLQKVKAMAEAKTMEEM--LVILE---GTDYEEPLRRLLLNEITLQEFELELYKVHYS 205
Query: 192 DFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLYPYG 251
++ G I S+ + D ++ + + + L ++D RKL G L
Sbjct: 206 KLLRYVNSRKGEEKIIASEFVNMLIDYTNISTLLRAKLSSLAQEDIRKLIIPGGTLSKST 265
Query: 252 HEELAVCEDIDQVRGVME 269
E + ED+ G +E
Sbjct: 266 IEAMINSEDVVMALGELE 283
>sp|O57726|VATC_PYRHO V-type ATP synthase subunit C OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=atpC PE=3 SV=1
Length = 370
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 106/257 (41%), Gaps = 10/257 (3%)
Query: 14 GYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEK 73
Y A +R A LLT ++ L + +TL + + L T+Y P L + S + I
Sbjct: 36 SYPNARIRAMEARLLTDQRFSELAESKTLQNFVVSLEDTDYSPRLASLQS-YNLYEIERA 94
Query: 74 CTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLG 133
L LVD + M+ + + E + + N+ ++ L Q+ + P G
Sbjct: 95 LDLSLVDLVELMIKIMPKRIRGLFEILLEEWDVRNITNVIKAKLSNLPPQDFI---IPAG 151
Query: 134 -MFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLED 192
MF + + ++ M E+ LV+++ + E + L +++++ LYK Y
Sbjct: 152 RMFPKVKAMVESKTMEEI--LVILE---GTEYEEPLRKLLLKEIDLQAFELELYKIYYSK 206
Query: 193 FYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLYPYGH 252
K+ G I + + D R ++I + + + + ++ + L G+L
Sbjct: 207 LLKYASSRKGEEKLISEEFIKMLIDYRNISIILRAKLSGMPSEEIKSLLIPGGMLSRAVL 266
Query: 253 EELAVCEDIDQVRGVME 269
E + ED+ G +E
Sbjct: 267 ESMLSSEDVMMALGELE 283
>sp|Q5JDR9|VATC_PYRKO V-type ATP synthase subunit C OS=Pyrococcus kodakaraensis (strain
ATCC BAA-918 / JCM 12380 / KOD1) GN=atpC PE=3 SV=1
Length = 365
Score = 39.7 bits (91), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 80/206 (38%), Gaps = 10/206 (4%)
Query: 14 GYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEK 73
Y A VR A LLT +N L + TL + L T+Y L N S ++ +E+
Sbjct: 35 SYPNARVRAMEAKLLTEQRFNELAESRTLQNFVASLEDTDYKETLSNVSS--YSVEEIER 92
Query: 74 C-TLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPL 132
L Y+ M + F + + N+ +V L + + + P
Sbjct: 93 ALDASLAKTYELMFKILPKRSRDFFRLMMEEWDVRNIANVVKAKLANEPASDYIIELGP- 151
Query: 133 GMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLED 192
M + +A A+ + E+ ++L TP + E I ++++ LY+ Y +
Sbjct: 152 -MLPKVKAMAEAKTLEEIL-VILEGTPYEGPYQELIAG----NIDVSTFETELYRMYYKK 205
Query: 193 FYKFCQKLGGATAEIMSDLLAFEADR 218
+ + ++++ + + D+
Sbjct: 206 LLNYARSRKDDEKTLLTEFIKLKIDK 231
>sp|O06502|VATC_DESSY V-type ATP synthase subunit C OS=Desulfurococcus sp. (strain SY)
GN=atpC PE=3 SV=1
Length = 364
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 9/172 (5%)
Query: 14 GYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEK 73
Y A ++ A LLT +N L + TL + ++L T+Y YL + S +T VEK
Sbjct: 34 SYPNARIKAMEAKLLTEQKFNELAESRTLQNFVVNLEDTDYKDYLADVSS--YTVEEVEK 91
Query: 74 CTLK-LVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPL 132
+ L Y+ M + F E + G + N+ +V L + + + L
Sbjct: 92 ALERALAGTYELMFKILPKRSKGFFELLLEGWDVRNIANVVKAKLANEPASDYVVE---L 148
Query: 133 G-MFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSE-DLDDMNIEIMR 182
G M + +A A+ + E+ ++L TP + + + E D+ E+ R
Sbjct: 149 GTMLPKVKAMAEAKTLEEIL-VILEGTPYEEVYQKLLLGEIDVTRFETELYR 199
>sp|C5A334|VATC_THEGJ V-type ATP synthase subunit C OS=Thermococcus gammatolerans (strain
DSM 15229 / JCM 11827 / EJ3) GN=atpC PE=3 SV=1
Length = 366
Score = 32.7 bits (73), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 15/178 (8%)
Query: 15 YLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQN-EPSPLHTTTIVEK 73
Y A + A LLT +N L + TL + ++L T+Y +L PL E+
Sbjct: 37 YPNARINAMEAKLLTGQRFNELAESRTLQNFIVNLEDTDYKVHLSGVTEDPLEIERAFER 96
Query: 74 CTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLG 133
L Y M + +S F + + N+ +V + + ++ +G
Sbjct: 97 A---LASTYLLMEEILPKRVSGFFRLLLEEWDVRNIASVVKAKVRG---EPAIDYVVEIG 150
Query: 134 -MFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSE-DLDDMNIEIMRNTLYKAY 189
M + +A A+ M E+ ++L TP ++ + E D+D E LYK Y
Sbjct: 151 TMVPKVKAIAEAKTMEEIL-VILEGTPYEEHYQRLLLGEIDVDQFETE-----LYKVY 202
>sp|Q7NA64|Y081_PHOLL UPF0276 protein plu0081 OS=Photorhabdus luminescens subsp.
laumondii (strain TT01) GN=plu0081 PE=3 SV=1
Length = 307
Score = 32.7 bits (73), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 13/105 (12%)
Query: 240 LYSNFGLLYPYGHEELA-VCEDIDQVRGVMEKYPPYQSIFSKLSYGESQMLDKAFYEEEV 298
L+ N L PY L VCE IDQV+ + + ++ + + + S M + F E V
Sbjct: 123 LFLNDLLPLPYTDVTLTRVCEHIDQVQNALRRPILLENPSTYIEFSASTMSETDFISEVV 182
Query: 299 KRLCLAFEQQVSISVKCSCLFRGSILFISCIPHFPLTRDVIFHLP 343
+R C L + L+IS + H R ++ LP
Sbjct: 183 RR------------TGCGLLLDVNNLYISGVNHNRCPRQMLLELP 215
>sp|A5UMW0|RADA_METS3 DNA repair and recombination protein RadA OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=radA PE=3
SV=1
Length = 311
Score = 32.7 bits (73), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 119 ERDVQELLEKCHPLGMFDSIATLAVAQNMREL------YRLVLVDTPLAPYFSECITSED 172
E D+ E+L+K H F+S + +A+ + EL +LV+VD+ +A + +E + E
Sbjct: 156 ELDIDEVLQKIHVARAFNSSHQILMAEKINELIQQGNNIKLVIVDSLMAHFRAEYVGRES 215
Query: 173 L 173
L
Sbjct: 216 L 216
>sp|Q9UUL4|MOK12_SCHPO Cell wall alpha-1,3-glucan synthase mok12 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mok12 PE=3 SV=1
Length = 2352
Score = 32.3 bits (72), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 14/82 (17%)
Query: 250 YGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKRLCLAFEQQV 309
+ +E D+D +R V K+PPY ++ S G + VK L +E+
Sbjct: 651 FTNENTTKTYDMDCMRQVDNKFPPYPALLGPYSSGST-----------VKNLLYPYEE-- 697
Query: 310 SISVKCSCLFRGSILFISCIPH 331
I + S + I I CIPH
Sbjct: 698 -IDLSTSTIDSPDIGNIGCIPH 718
>sp|Q57672|VATC_METJA V-type ATP synthase subunit C OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=atpC PE=3 SV=2
Length = 381
Score = 31.6 bits (70), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 56/142 (39%), Gaps = 3/142 (2%)
Query: 14 GYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEK 73
Y+ A +R A L A N L + +L+++ L T+YG Y+ + L VEK
Sbjct: 38 AYVNARIRSKEAKLFDDAKLNELIESGSLEELVGLLEDTDYGQYVIEVMNELKDPVAVEK 97
Query: 74 C-TLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPL 132
+ L D Y + + + L+ I N+ ++ +E PL
Sbjct: 98 ALDMYLADLYGLIYRISPDSAKKVLKVFAKKFDIKNIKTLIRAKFVGLSAEETYALLIPL 157
Query: 133 GMF--DSIATLAVAQNMRELYR 152
G + + LA + + E+ R
Sbjct: 158 GNIPVEKLKELAEVKTVEEVVR 179
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,700,639
Number of Sequences: 539616
Number of extensions: 5384514
Number of successful extensions: 12605
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 12561
Number of HSP's gapped (non-prelim): 33
length of query: 355
length of database: 191,569,459
effective HSP length: 118
effective length of query: 237
effective length of database: 127,894,771
effective search space: 30311060727
effective search space used: 30311060727
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)