BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018460
(355 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P96554|Y319_MYXXA Uncharacterized membrane protein STKORF319 OS=Myxococcus xanthus
PE=3 SV=1
Length = 319
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 152/232 (65%), Gaps = 1/232 (0%)
Query: 122 AFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNR 181
A VS A+ FG GV + G +F GY++E+SLSVDN+FVFV+IF ++P +YQ+R
Sbjct: 48 ALWVSLALVFGAGVWWKFGPEPGLQFITGYLIEKSLSVDNIFVFVVIFSALRIPALYQHR 107
Query: 182 VLSYGIAGAIVFRLSLILLGTATLQRFEAVNLVLAGILLFSSFKLFASEEDDTDLSDNFI 241
VL +GI A+ R +I G A L RF + V G L+ + KLF + + + +
Sbjct: 108 VLFWGILSALALRAIMIFAGVAMLARFHWLIYVFGGFLIITGVKLFLQRNKEDNPEEGAL 167
Query: 242 VKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRD 301
++ +R IP T +DG+ FFT ++G + ATPLL+ + ++E SDI FA+DSIPA+F VT D
Sbjct: 168 MRLARRTIPSTPNFDGHHFFTVENGRKLATPLLMALLLVEASDILFALDSIPAIFAVTTD 227
Query: 302 PFIVFSSNLFAILGLRSLFTLISEGMADLEYLQPSIAVVLGFIGCKM-ILDY 352
PFIVF+SN+FAILGLRS+F +++ + YL+ ++ VL F+G KM I+D+
Sbjct: 228 PFIVFTSNIFAILGLRSMFFMLAGAVEKFSYLKVGLSAVLVFVGTKMAIIDF 279
>sp|P60067|ALX_PHOLL Inner membrane protein alx OS=Photorhabdus luminescens subsp.
laumondii (strain TT01) GN=alx PE=3 SV=1
Length = 320
Score = 186 bits (472), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/257 (38%), Positives = 153/257 (59%), Gaps = 9/257 (3%)
Query: 106 RQIEGRESYTSSVKTVAFCVSTAVAFGLG--------VGFIEGASKASEFFAGYILEQSL 157
R+ E S+ + VS ++ F LG VG S+ F GY+LE++L
Sbjct: 30 RKKEQAMSFRQAAVWSVIWVSLSLLFALGLWWYCRETVGVAVANSQVMAFLTGYLLEKAL 89
Query: 158 SVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGTATLQRFEAVNLVLAG 217
+VDN+FV++++F YF +P Q RVL YG+ GAIV R +I G+ + +F + +
Sbjct: 90 AVDNVFVWLMLFSYFAIPANLQRRVLIYGVLGAIVLRTVMIFAGSWLVSQFSWILYLFGL 149
Query: 218 ILLFSSFKLFASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTV 277
LL + K+ +EDD+ + D V+ + I +T G RFF + G+ ATPL+L +
Sbjct: 150 FLLVTGVKMALVKEDDSPIGDKPFVRWLKAHIRITDNLHGERFFVKEKGLLYATPLILVL 209
Query: 278 AVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGLRSLFTLISEGMADLEYLQPSI 337
++E+SD+ FAVDSIPA+F VT DPFIV +SNLFAILGLR+++ L++ L+ +
Sbjct: 210 ILVEISDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFLLAGVAEKFTMLKYGL 269
Query: 338 AVVLGFIGCKM-ILDYF 353
+V+L FIG KM I+D++
Sbjct: 270 SVILAFIGIKMLIIDFY 286
>sp|Q83Q35|ALX_SHIFL Inner membrane protein alx OS=Shigella flexneri GN=alx PE=3 SV=1
Length = 320
Score = 185 bits (470), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 141/212 (66%), Gaps = 1/212 (0%)
Query: 143 KASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGT 202
+A F GY++E+SL+VDN+FV++++F YF VP Q RVL YG+ GAIV R +I G+
Sbjct: 75 QALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVLGAIVLRTIMIFTGS 134
Query: 203 ATLQRFEAVNLVLAGILLFSSFKLFASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFT 262
+ +F+ + + LLF+ K+ + ED++ + D +V+ + + +T D FF
Sbjct: 135 WLISQFDWILYIFGAFLLFTGVKMALAHEDESGIGDKPLVRWLRGHLRMTDTIDNEHFFV 194
Query: 263 NQDGMRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGLRSLFTL 322
++G+ ATPL+L + ++ELSD+ FAVDSIPA+F VT DPFIV +SNLFAILGLR+++ L
Sbjct: 195 RKNGLLYATPLMLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFL 254
Query: 323 ISEGMADLEYLQPSIAVVLGFIGCKM-ILDYF 353
++ L+ +AV+L FIG KM I+D++
Sbjct: 255 LAGVAERFSMLKYGLAVILVFIGIKMLIVDFY 286
>sp|P42601|ALX_ECOLI Inner membrane protein alx OS=Escherichia coli (strain K12) GN=alx
PE=1 SV=2
Length = 321
Score = 185 bits (469), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 141/212 (66%), Gaps = 1/212 (0%)
Query: 143 KASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGT 202
+A F GY++E+SL+VDN+FV++++F YF VP Q RVL YG+ GAIV R +I G+
Sbjct: 75 QALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVLGAIVLRTIMIFTGS 134
Query: 203 ATLQRFEAVNLVLAGILLFSSFKLFASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFT 262
+ +F+ + + LLF+ K+ + ED++ + D +V+ + + +T D FF
Sbjct: 135 WLISQFDWILYIFGAFLLFTGVKMALAHEDESGIGDKPLVRWLRGHLRMTDTIDNEHFFV 194
Query: 263 NQDGMRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGLRSLFTL 322
++G+ ATPL+L + ++ELSD+ FAVDSIPA+F VT DPFIV +SNLFAILGLR+++ L
Sbjct: 195 RKNGLLYATPLMLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFL 254
Query: 323 ISEGMADLEYLQPSIAVVLGFIGCKM-ILDYF 353
++ L+ +AV+L FIG KM I+D++
Sbjct: 255 LAGVAERFSMLKYGLAVILVFIGIKMLIVDFY 286
>sp|Q8XAJ0|ALX_ECO57 Inner membrane protein alx OS=Escherichia coli O157:H7 GN=alx PE=3
SV=1
Length = 321
Score = 185 bits (469), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 141/212 (66%), Gaps = 1/212 (0%)
Query: 143 KASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGT 202
+A F GY++E+SL+VDN+FV++++F YF VP Q RVL YG+ GAIV R +I G+
Sbjct: 75 QALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVLGAIVLRTIMIFTGS 134
Query: 203 ATLQRFEAVNLVLAGILLFSSFKLFASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFT 262
+ +F+ + + LLF+ K+ + ED++ + D +V+ + + +T D FF
Sbjct: 135 WLISQFDWILYIFGAFLLFTGVKMALAHEDESGIGDKPLVRWLRGHLRMTDTIDNEHFFV 194
Query: 263 NQDGMRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGLRSLFTL 322
++G+ ATPL+L + ++ELSD+ FAVDSIPA+F VT DPFIV +SNLFAILGLR+++ L
Sbjct: 195 RKNGLLYATPLMLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFL 254
Query: 323 ISEGMADLEYLQPSIAVVLGFIGCKM-ILDYF 353
++ L+ +AV+L FIG KM I+D++
Sbjct: 255 LAGVAERFSMLKYGLAVILVFIGIKMLIVDFY 286
>sp|Q8FDE1|ALX_ECOL6 Inner membrane protein alx OS=Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC) GN=alx PE=3 SV=1
Length = 321
Score = 185 bits (469), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 141/212 (66%), Gaps = 1/212 (0%)
Query: 143 KASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGT 202
+A F GY++E+SL+VDN+FV++++F YF VP Q RVL YG+ GAIV R +I G+
Sbjct: 75 QALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVLGAIVLRTIMIFTGS 134
Query: 203 ATLQRFEAVNLVLAGILLFSSFKLFASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFT 262
+ +F+ + + LLF+ K+ + ED++ + D +V+ + + +T D FF
Sbjct: 135 WLISQFDWILYIFGAFLLFTGVKMALAHEDESGIGDKPLVRWLRGHLRMTDTIDNEHFFV 194
Query: 263 NQDGMRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGLRSLFTL 322
++G+ ATPL+L + ++ELSD+ FAVDSIPA+F VT DPFIV +SNLFAILGLR+++ L
Sbjct: 195 RKNGLLYATPLMLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFL 254
Query: 323 ISEGMADLEYLQPSIAVVLGFIGCKM-ILDYF 353
++ L+ +AV+L FIG KM I+D++
Sbjct: 255 LAGVAERFSMLKYGLAVILVFIGIKMLIVDFY 286
>sp|Q8Z3L5|ALX_SALTI Inner membrane protein alx OS=Salmonella typhi GN=alx PE=3 SV=1
Length = 322
Score = 184 bits (466), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 141/212 (66%), Gaps = 1/212 (0%)
Query: 143 KASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGT 202
+A F GY++E+SL+VDN+FV++++F YF VP Q RVL YG+ GAIV R +I GT
Sbjct: 75 QALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPPALQRRVLVYGVLGAIVLRTIMIFAGT 134
Query: 203 ATLQRFEAVNLVLAGILLFSSFKLFASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFT 262
+ +FE + V LLF+ K+ ++ED++ + + +V+ + + +T + FF
Sbjct: 135 WLITQFEWLLYVFGAFLLFTGVKMALAKEDESGIGEKPMVRWLRGHLRMTDTIENEHFFV 194
Query: 263 NQDGMRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGLRSLFTL 322
++G+ ATPLLL + ++E SD+ FAVDSIPA+F VT DPFIV +SNLFAILGLR+++ L
Sbjct: 195 RKNGLLYATPLLLVLIMVEFSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFL 254
Query: 323 ISEGMADLEYLQPSIAVVLGFIGCKM-ILDYF 353
+S L+ +AV+L FIG KM I+D++
Sbjct: 255 LSGVAERFSMLKYGLAVILVFIGIKMLIVDFY 286
>sp|Q8ZLX2|ALX_SALTY Inner membrane protein alx OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=alx PE=3 SV=1
Length = 322
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 141/212 (66%), Gaps = 1/212 (0%)
Query: 143 KASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGT 202
+A F GY++E+SL+VDN+FV++++F YF VP Q RVL YG+ GAIV R +I GT
Sbjct: 75 QALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPPALQRRVLVYGVLGAIVLRTIMIFAGT 134
Query: 203 ATLQRFEAVNLVLAGILLFSSFKLFASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFT 262
+ +FE + V LLF+ K+ ++ED++ + + +V+ + + +T + FF
Sbjct: 135 WLITQFEWLLYVFGAFLLFTGVKMALAKEDESGIGEKPMVRWLRGHLRMTDTIENEHFFV 194
Query: 263 NQDGMRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGLRSLFTL 322
++G+ ATPLLL + ++E SD+ FAVDSIPA+F VT DPFIV +SNLFAILGLR+++ L
Sbjct: 195 RKNGLLYATPLLLVLIMVEFSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFL 254
Query: 323 ISEGMADLEYLQPSIAVVLGFIGCKM-ILDYF 353
+S L+ +AV+L FIG KM I+D++
Sbjct: 255 LSGVAERFSMLKYGLAVILVFIGIKMLIVDFY 286
>sp|Q92GA4|Y1219_RICCN Uncharacterized membrane protein RC1219 OS=Rickettsia conorii
(strain ATCC VR-613 / Malish 7) GN=RC1219 PE=3 SV=1
Length = 301
Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 152/242 (62%)
Query: 113 SYTSSVKTVAFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYF 172
S+ SV F + A FG+ V + GA A E++ +++E+++S+DN+FV +IF++F
Sbjct: 29 SFKESVLFSLFYLVIACLFGIYVYYNTGADHAREYYTCFLIEKAMSLDNIFVISIIFQFF 88
Query: 173 KVPVMYQNRVLSYGIAGAIVFRLSLILLGTATLQRFEAVNLVLAGILLFSSFKLFASEED 232
K+P YQ+RVL +GI G I+FR +I G + +F + + A IL+ + K F
Sbjct: 89 KIPWQYQHRVLFFGIIGVIIFRAVMIYGGIILINKFAWLLYIFAVILIATGIKTFYVSHK 148
Query: 233 DTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTVAVIELSDIAFAVDSI 292
D+ +++I K+ + + +T +GN+F ++ TPL +++ +IE D+ FA+DSI
Sbjct: 149 TFDIQNSYIYKSIIKNLNITPNLEGNKFIVKRNNKLYCTPLFISLVLIEAIDLVFAIDSI 208
Query: 293 PAVFGVTRDPFIVFSSNLFAILGLRSLFTLISEGMADLEYLQPSIAVVLGFIGCKMILDY 352
PA+F +T D +I+++SN+FAILGLR+LF ++E + Y++ S+A++L FI K+ + +
Sbjct: 209 PAIFAITNDVYIIYTSNIFAILGLRALFFCLAEIVERFSYIKYSLALILIFISFKIFIHH 268
Query: 353 FV 354
++
Sbjct: 269 YI 270
>sp|Q1RKF1|Y082_RICBR Uncharacterized membrane protein RBE_0082 OS=Rickettsia bellii
(strain RML369-C) GN=RBE_0082 PE=3 SV=1
Length = 302
Score = 170 bits (431), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 153/242 (63%)
Query: 113 SYTSSVKTVAFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYF 172
S+ S+ F + + FG+ + + GA E++ +++E+++S+DN+FV +IF++F
Sbjct: 29 SFKQSLLFSLFYFTISCLFGIYIYYNMGADSTREYYTCFLIEKAMSLDNIFVISIIFQFF 88
Query: 173 KVPVMYQNRVLSYGIAGAIVFRLSLILLGTATLQRFEAVNLVLAGILLFSSFKLFASEED 232
K+P YQ+RVL +GI G I FR +I G + +F + + A IL+ + K F
Sbjct: 89 KIPQKYQHRVLFFGIIGVIAFRAVMIYGGIILINKFSWLLYIFAVILIATGVKTFYVSHK 148
Query: 233 DTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTVAVIELSDIAFAVDSI 292
D+ ++++ K+ +++ VT +G++FF ++ TPL +++ +IE D+ FA+DSI
Sbjct: 149 TFDIQNSYLYKSIIKYLNVTPNLEGDKFFVTRNKKLYVTPLFISLILIEAIDLVFAIDSI 208
Query: 293 PAVFGVTRDPFIVFSSNLFAILGLRSLFTLISEGMADLEYLQPSIAVVLGFIGCKMILDY 352
PA+F +T D +I+++SN+FAILGLR+LF ++E + Y++ S+A++L FIG K+ + +
Sbjct: 209 PAIFAITNDAYIIYTSNIFAILGLRALFFCLAEIVERFSYIKYSLALILIFIGIKIFIHH 268
Query: 353 FV 354
++
Sbjct: 269 YI 270
>sp|Q4UK32|Y1252_RICFE Uncharacterized membrane protein RF_1252 OS=Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2) GN=RF_1252 PE=3 SV=2
Length = 301
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 152/242 (62%)
Query: 113 SYTSSVKTVAFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYF 172
S+ SV F A FG+ + GA A E++ +++E+++S+DN+FV +IF++F
Sbjct: 29 SFKESVLFSLFYFVIACLFGIYFYYNTGAEHAREYYTCFLIEKAMSLDNIFVISIIFQFF 88
Query: 173 KVPVMYQNRVLSYGIAGAIVFRLSLILLGTATLQRFEAVNLVLAGILLFSSFKLFASEED 232
K+P YQ+RVL +GI G I+FR +I GT + +F + + A IL+ + K F
Sbjct: 89 KIPGKYQHRVLFFGIIGVIIFRAIMIYGGTILINKFAWLLYIFAVILIATGIKTFYVSHK 148
Query: 233 DTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTVAVIELSDIAFAVDSI 292
D+ +++I K+ + + +T +G++F ++ TPL +++ +IE D+ FA+DSI
Sbjct: 149 TFDIQNSYIYKSIVKNLNITPNLEGDKFVVKRNNKLYFTPLFISLVLIEAIDLVFAIDSI 208
Query: 293 PAVFGVTRDPFIVFSSNLFAILGLRSLFTLISEGMADLEYLQPSIAVVLGFIGCKMILDY 352
PA+F +T D +I+++SN+FAILGLR+LF ++E + Y++ S+A++L FIG K+ + +
Sbjct: 209 PAIFAITNDVYIIYTSNIFAILGLRALFFCLAEIVERFSYIKYSLALILIFIGFKIFIHH 268
Query: 353 FV 354
++
Sbjct: 269 YI 270
>sp|Q52356|TERC_SERMA Tellurium resistance protein TerC OS=Serratia marcescens GN=terC
PE=3 SV=1
Length = 346
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/272 (38%), Positives = 153/272 (56%), Gaps = 34/272 (12%)
Query: 111 RESYTSSVKTVA----FCVSTAVAFGLGVGFI---EGASKASEFFAGYILEQSLSVDNLF 163
R+ S+K+ A F V A+AF GF+ GA AS F GY LE+ LSVDNLF
Sbjct: 32 RDDKPISLKSAALWSVFWVVVAMAFA---GFLYIHHGAEVASLFVTGYALEKVLSVDNLF 88
Query: 164 VFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGTATLQRFEAVNLVLAGILLFSS 223
V + IF +F VP Y++RVL +GI GAIVFR + +GT+ L V +V A I+ +++
Sbjct: 89 VMMAIFSWFAVPDRYRHRVLYWGIIGAIVFRGIFVAIGTSLLSLGPYVEVVFAIIVAWTA 148
Query: 224 FKLFASEEDDTDLSD---NFIVKTCQRFIPVTTYYDGNRFFTNQD--------------- 265
+ S +DD ++ D + + +RF P+ G+ F NQ
Sbjct: 149 VMMLKSGDDDDEIEDYSQHLAYRMVKRFFPIWPKLRGHAFLLNQKEVDAELAKPENSDVT 208
Query: 266 -GMRK-----ATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGLRSL 319
G K ATPL L VAV+ELSD+ FA DS+PA+ V+R+P IV+S+ +FAILGLR+L
Sbjct: 209 IGRGKKAALYATPLFLCVAVVELSDVMFAFDSVPAIIAVSREPLIVYSAMMFAILGLRTL 268
Query: 320 FTLISEGMADLEYLQPSIAVVLGFIGCKMILD 351
+ ++ L +L+ ++ V+L FI K+ L+
Sbjct: 269 YFVLEALKQYLVHLEKAVIVLLFFIAAKLGLN 300
>sp|P0A615|Y2742_MYCBO Uncharacterized membrane protein Mb2742 OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb2742 PE=3 SV=1
Length = 397
Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 139/231 (60%), Gaps = 4/231 (1%)
Query: 125 VSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLS 184
V A+ FG+ V G+ A E+FA Y+ +++LSVDNLFVF++I F VP + Q +VL
Sbjct: 46 VGIAILFGIAVVVFGGSELAVEYFACYLTDEALSVDNLFVFLVIISSFGVPRLAQQKVLL 105
Query: 185 YGIAGAIVFRLSLILLGTATLQRFEAVNLVLAGILLFSSFKLFA----SEEDDTDLSDNF 240
+GIA A+V R I +G A ++ F + + +LL + L D L +
Sbjct: 106 FGIAFALVTRTGFIFVGAALIENFNSAFYLFGLVLLVMAGNLARPTGLESRDAETLKRSV 165
Query: 241 IVKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTR 300
I++ RF+ + Y+G+R FT + R TPLLL + + +DI FA DSIPA+FG+T+
Sbjct: 166 IIRLADRFLRTSQDYNGDRLFTVSNNKRMMTPLLLVMIAVGGTDILFAFDSIPALFGLTQ 225
Query: 301 DPFIVFSSNLFAILGLRSLFTLISEGMADLEYLQPSIAVVLGFIGCKMILD 351
+ ++VF++ F++LGLR L+ LI + L YL +AV+LGFIG K++L+
Sbjct: 226 NVYLVFAATAFSLLGLRQLYFLIDGLLDRLVYLSYGLAVILGFIGVKLMLE 276
>sp|P0A614|Y2723_MYCTU Uncharacterized membrane protein Rv2723/MT2795 OS=Mycobacterium
tuberculosis GN=Rv2723 PE=3 SV=1
Length = 397
Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 139/231 (60%), Gaps = 4/231 (1%)
Query: 125 VSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLS 184
V A+ FG+ V G+ A E+FA Y+ +++LSVDNLFVF++I F VP + Q +VL
Sbjct: 46 VGIAILFGIAVVVFGGSELAVEYFACYLTDEALSVDNLFVFLVIISSFGVPRLAQQKVLL 105
Query: 185 YGIAGAIVFRLSLILLGTATLQRFEAVNLVLAGILLFSSFKLFA----SEEDDTDLSDNF 240
+GIA A+V R I +G A ++ F + + +LL + L D L +
Sbjct: 106 FGIAFALVTRTGFIFVGAALIENFNSAFYLFGLVLLVMAGNLARPTGLESRDAETLKRSV 165
Query: 241 IVKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTR 300
I++ RF+ + Y+G+R FT + R TPLLL + + +DI FA DSIPA+FG+T+
Sbjct: 166 IIRLADRFLRTSQDYNGDRLFTVSNNKRMMTPLLLVMIAVGGTDILFAFDSIPALFGLTQ 225
Query: 301 DPFIVFSSNLFAILGLRSLFTLISEGMADLEYLQPSIAVVLGFIGCKMILD 351
+ ++VF++ F++LGLR L+ LI + L YL +AV+LGFIG K++L+
Sbjct: 226 NVYLVFAATAFSLLGLRQLYFLIDGLLDRLVYLSYGLAVILGFIGVKLMLE 276
>sp|P18780|TERC_ALCSP Tellurium resistance protein TerC OS=Alcaligenes sp. GN=terC PE=3
SV=1
Length = 346
Score = 154 bits (390), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 101/272 (37%), Positives = 147/272 (54%), Gaps = 34/272 (12%)
Query: 111 RESYTSSVKTVA----FCVSTAVAFGLGVGFI---EGASKASEFFAGYILEQSLSVDNLF 163
R S+K+ A F V A+AF GF+ GA AS F GY LE+ LSVDNLF
Sbjct: 32 RHDKPISLKSAALWSVFWVVVAMAFA---GFLYVHHGAEVASLFVTGYALEKVLSVDNLF 88
Query: 164 VFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGTATLQRFEAVNLVLAGILLFSS 223
V + IF +F VP Y++R L +GI GAIVFR + +GT L V L+ A ++ +++
Sbjct: 89 VMMAIFSWFSVPDRYRHRGLYWGIIGAIVFRGIFVAIGTGLLSLGPYVELIFAVVVAWTA 148
Query: 224 FKLFASEEDDTDLSD---NFIVKTCQRFIPVTTYYDGNRFFTNQD--------------- 265
+ DD ++ D + + +RF P+ G+ F Q
Sbjct: 149 VMMLKGGGDDDEIEDYSQHLAYRLVKRFFPIWPKLSGHAFLLTQKEVDAELAKPENKDVS 208
Query: 266 -GMRK-----ATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGLRSL 319
G K ATPL+L VAV+ELSD+ FA DS+PA+ V+R+P IV+S+ +FAILGLR+L
Sbjct: 209 VGRLKKAALYATPLMLCVAVVELSDVMFAFDSVPAIIAVSREPLIVYSAMMFAILGLRTL 268
Query: 320 FTLISEGMADLEYLQPSIAVVLGFIGCKMILD 351
+ ++ L L+ ++ V+L FI K+ L+
Sbjct: 269 YFVLEALKQYLSQLEKAVIVLLFFIAFKLGLN 300
>sp|Q89AT3|Y156_BUCBP Uncharacterized membrane protein bbp_156 OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=bbp_156 PE=3
SV=1
Length = 321
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 133/210 (63%), Gaps = 2/210 (0%)
Query: 147 FFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGTATLQ 206
F +GY+LEQSLS+DN+ ++ +F+ F + +++Q +L YG A+VFR S+I G L
Sbjct: 80 FISGYLLEQSLSMDNVAMWFFLFQLFSISMVHQRVILFYGTFLALVFRSSIIFFGVWLLS 139
Query: 207 RFEAVNLVLAGILLFSSFKLFASE--EDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQ 264
++ + VL+ ILLF+ S TD+ + FI+ + +T + N FFT +
Sbjct: 140 KWSFLFYVLSIILLFTGIITILSNGVNKKTDVQNTFIMSWIYKKFRITKNFSKNNFFTKE 199
Query: 265 DGMRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGLRSLFTLIS 324
+G+ ATPL L + +IEL+DI F++DSIPA+F +T+DPFI+ +S+ F+I+GLRS++ +++
Sbjct: 200 NGVIVATPLFLVLILIELNDIIFSIDSIPAIFLITKDPFIIITSSFFSIIGLRSIYVILA 259
Query: 325 EGMADLEYLQPSIAVVLGFIGCKMILDYFV 354
+ ++ I ++L FI K++L FV
Sbjct: 260 NSIQKFYIIKYGITLILIFISIKILLKEFV 289
>sp|Q68VW2|Y774_RICTY Uncharacterized membrane protein RT0774 OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=RT0774 PE=3 SV=1
Length = 302
Score = 142 bits (357), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 150/242 (61%)
Query: 113 SYTSSVKTVAFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYF 172
++ SSV F + FG+ + G A E++ +++E+++++DN+F+ +IF++F
Sbjct: 29 AFKSSVFLSLFYFIISCLFGIYIYHNMGLDHAREYYTCFLIEKAMALDNIFIISIIFQFF 88
Query: 173 KVPVMYQNRVLSYGIAGAIVFRLSLILLGTATLQRFEAVNLVLAGILLFSSFKLFASEED 232
K+P YQ+RVL +GI G I+F+ +I G + +F + + A IL+ + K F
Sbjct: 89 KIPTTYQHRVLFFGIIGVIIFKAIIIYGGIMLIHKFSWLLYIFAVILIATGIKTFNVSHK 148
Query: 233 DTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTVAVIELSDIAFAVDSI 292
D+ +++I K+ + + +T +G++F ++ +PL +++ +IE D+ FA+DSI
Sbjct: 149 TYDIQNSYIYKSIIKNLNITHNLEGHKFVIKRNNKLYFSPLFVSLILIETIDVVFAIDSI 208
Query: 293 PAVFGVTRDPFIVFSSNLFAILGLRSLFTLISEGMADLEYLQPSIAVVLGFIGCKMILDY 352
A+F +T D +I+++SN+FAILGLRSLF +SE + Y++ S+A++L FIG K+ + +
Sbjct: 209 AAIFAITNDVYIIYTSNIFAILGLRSLFFCLSEIVERFSYIKYSLALILIFIGFKIFMHH 268
Query: 353 FV 354
++
Sbjct: 269 YI 270
>sp|O05976|Y786_RICPR Uncharacterized membrane protein RP786 OS=Rickettsia prowazekii
(strain Madrid E) GN=RP786 PE=3 SV=1
Length = 297
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 147/242 (60%)
Query: 113 SYTSSVKTVAFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYF 172
S+ S+ F + FG+ V G A E++ +++E+++++DN+F+ +IF++F
Sbjct: 29 SFKGSILLSLFYFIISCLFGIYVYHNMGLDHAREYYTCFLIEKAMALDNIFIISIIFQFF 88
Query: 173 KVPVMYQNRVLSYGIAGAIVFRLSLILLGTATLQRFEAVNLVLAGILLFSSFKLFASEED 232
+P YQ+RVL +GI G I+F+ +I G + +F + +LA IL+ + K F
Sbjct: 89 NIPSTYQHRVLFFGIIGVIIFKAIIIYGGIMLIHKFSWLLYILAVILIATGIKTFNVSHK 148
Query: 233 DTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTVAVIELSDIAFAVDSI 292
D+ +++I K+ + + +T +G +F ++ + L +++ +IE D+ FA+DSI
Sbjct: 149 TYDIQNSYIYKSIIKNLNITHDLEGQKFVIKRNNKLYFSTLFVSLILIETIDLVFAIDSI 208
Query: 293 PAVFGVTRDPFIVFSSNLFAILGLRSLFTLISEGMADLEYLQPSIAVVLGFIGCKMILDY 352
A+F +T D +I+++SN+FAILGLRSLF +SE + Y++ S+A++L FIG K+ + +
Sbjct: 209 AAIFAITNDVYIIYTSNIFAILGLRSLFFCLSEIVERFSYIKYSLALILIFIGFKIFIHH 268
Query: 353 FV 354
++
Sbjct: 269 YI 270
>sp|Q8K9X4|Y160_BUCAP Uncharacterized membrane protein BUsg_160 OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=BUsg_160 PE=3
SV=1
Length = 310
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 120/212 (56%), Gaps = 1/212 (0%)
Query: 143 KASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGT 202
K F Y LE LS+DN+F + IFK K+P++YQ +VL YG+ GA++ R G+
Sbjct: 68 KIIYFLTSYFLEILLSIDNVFAWFFIFKSLKIPLIYQKKVLLYGLWGALILRSIFSFSGS 127
Query: 203 ATLQRFEAVNLVLAGILLFSSFK-LFASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFF 261
++ + + G + +S K +F S + + +N +F VT + FF
Sbjct: 128 FLFSKWHWILYLFGGFFILTSLKFIFFSNLECDNKEENIKKLWIYKFFRVTENINNENFF 187
Query: 262 TNQDGMRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGLRSLFT 321
+ TPL +++ +IELSDI F+VDSIPA V D FI+FSSN FA+LGLRS++
Sbjct: 188 VKIEKKIFITPLFVSLILIELSDIVFSVDSIPAALSVNNDLFIIFSSNFFAVLGLRSMYL 247
Query: 322 LISEGMADLEYLQPSIAVVLGFIGCKMILDYF 353
+ + + ++ +++++L FIG K++++ F
Sbjct: 248 FTAYFLKNFPIMKYALSLILMFIGFKILIEKF 279
>sp|O34447|YCEF_BACSU Uncharacterized membrane protein YceF OS=Bacillus subtilis (strain
168) GN=yceF PE=3 SV=1
Length = 257
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 32/201 (15%)
Query: 152 ILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGTATLQRFEAV 211
+LE LS DN V ++ K+ +P + + L+YG+ GA +FR I LG L +F +
Sbjct: 38 VLEGLLSADNALVLAVMVKH--LPEKQRKKALTYGLFGAYIFRFIFIGLGM-LLIKFWWI 94
Query: 212 NLVLAGILLFSSFKLF----ASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQDGM 267
++ A L + K F EE D ++++V+T F
Sbjct: 95 KVLGALYLAWLVIKHFWIGEKEEEADGMKKNSWMVRTFGIFWA----------------- 137
Query: 268 RKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGLRSLFTLISEGM 327
TV +EL D+AF+VDSI A F V+ +++ + IL +R++ + +
Sbjct: 138 --------TVISVELMDLAFSVDSILAAFAVSEKVWVLLIGGMLGILMMRTVAKVFLVLI 189
Query: 328 ADLEYLQPSIAVVLGFIGCKM 348
+ L+ + V++G I KM
Sbjct: 190 DKIPELENTAFVLIGIIALKM 210
>sp|O34997|YKOY_BACSU Uncharacterized membrane protein YkoY OS=Bacillus subtilis (strain
168) GN=ykoY PE=3 SV=1
Length = 324
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 53/218 (24%)
Query: 153 LEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGTATLQRFEAVN 212
LE L+ DN V ++ K+ +P + + L YG+AGA V R L + L V
Sbjct: 79 LEGILAADNALVMAVMVKH--LPEEKRKKALFYGLAGAFVLRFG-SLFAISFLVNVWQVQ 135
Query: 213 LVLAGILLFSS----FKLFASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQDGMR 268
+ A LL+ S K + +++DT T Q G
Sbjct: 136 AIGAIYLLYISASHLLKRYVFKKEDTHKE------------------------TKQSGFW 171
Query: 269 KATPLLLTVAVIELSDIAFAVDSI---------------PAVFGVTRDPFIV-FSSNLFA 312
TV +EL+DIAFAVDSI P + G+ F+V + +
Sbjct: 172 P------TVLKVELADIAFAVDSILAAVALAVTLPGTSLPKIGGLDGGQFLVILAGGIIG 225
Query: 313 ILGLRSLFTLISEGMADLEYLQPSIAVVLGFIGCKMIL 350
++ +R ++ + + + L+ + V++G++G K+ L
Sbjct: 226 LVIMRFAASMFVKLLKERPSLETAAFVIVGWVGVKLAL 263
>sp|Q6BMD6|M28P1_DEBHA Probable zinc metalloprotease DEHA2F06380g OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=DEHA2F06380g PE=3 SV=2
Length = 1016
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 21/118 (17%)
Query: 226 LFASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTVAVIELSDI 285
LF ++D + ++N I KT TYY+ N +G + P LL A
Sbjct: 138 LFIECDNDVNYTNNIIFKTENDLYNQVTYYESNNLLVRINGSDSSLPALLVSA------- 190
Query: 286 AFAVDSIPAVFGVTRDPFIVFSSNLFAILGLRSLFTLISEGMADLEYLQPSIAVVLGF 343
DS+P+ FGVT D + S +LG+ + ++ S+G+ QP ++L F
Sbjct: 191 --HFDSVPSSFGVTDDGMGIAS-----LLGILNYYS--SDGID-----QPMRTIILNF 234
>sp|Q2RFN9|RPOB_MOOTA DNA-directed RNA polymerase subunit beta OS=Moorella thermoacetica
(strain ATCC 39073) GN=rpoB PE=3 SV=1
Length = 1141
Score = 32.7 bits (73), Expect = 3.8, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 25/53 (47%)
Query: 228 ASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTVAVI 280
AS+ D D+S +V IP + D NR + R+A PLL T A I
Sbjct: 525 ASQVDYMDVSPKQMVSVATALIPFLEHDDANRALMGANMQRQAVPLLRTEAPI 577
>sp|A6TWJ0|RPOB_ALKMQ DNA-directed RNA polymerase subunit beta OS=Alkaliphilus
metalliredigens (strain QYMF) GN=rpoB PE=3 SV=1
Length = 1246
Score = 32.7 bits (73), Expect = 3.8, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 32/76 (42%)
Query: 230 EEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTVAVIELSDIAFAV 289
E D D+S +V IP D NR + R+A PLL+T A I + + +
Sbjct: 628 EVDYMDVSPKQVVSVATAMIPFLENDDANRALMGSNMQRQAVPLLITDAPIIGTGMEYKA 687
Query: 290 DSIPAVFGVTRDPFIV 305
V V R+ IV
Sbjct: 688 AKDSGVVVVARNSGIV 703
>sp|A8MLD2|RPOB_ALKOO DNA-directed RNA polymerase subunit beta OS=Alkaliphilus oremlandii
(strain OhILAs) GN=rpoB PE=3 SV=1
Length = 1241
Score = 32.7 bits (73), Expect = 3.8, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 25/53 (47%)
Query: 228 ASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTVAVI 280
A+E D D+S +V IP D NR + R+A PLL+T A I
Sbjct: 627 ANEVDYMDVSPKQVVSVATAMIPFLENDDANRALMGANMQRQAVPLLITDAPI 679
>sp|Q8KG15|RPOB_CHLTE DNA-directed RNA polymerase subunit beta OS=Chlorobium tepidum
(strain ATCC 49652 / DSM 12025 / TLS) GN=rpoB PE=3 SV=1
Length = 1303
Score = 32.3 bits (72), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 226 LFASEEDDTDLSDNFIVKTCQRFIPVTTYYDGNRFFTNQDGMRKATPLLLTVAVI 280
+ A E + D+S IV IP + DGNR + R+A PLL++ A I
Sbjct: 633 VLAEEVNYMDVSPVQIVSAAAALIPFLEHDDGNRALMGANMQRQAVPLLVSEAPI 687
>sp|P53109|AIM14_YEAST Probable metalloreductase AIM14 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=AIM14 PE=1 SV=1
Length = 570
Score = 32.0 bits (71), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 70 TEQEDDLSTSEVGRSSSQSHEN-DNTSHSPTTVDDAERQIEGRESYTSSVKTVAFCVSTA 128
+++DLS S ++ S++N TSHSPT + + +++ + S+T S + +F +A
Sbjct: 472 NNEDEDLSISNFNSENADSNDNTPETSHSPTKENGSMIEVKSKHSFTLSNELKSFNNESA 531
>sp|B3LHL3|AIM14_YEAS1 Probable metalloreductase AIM14 OS=Saccharomyces cerevisiae (strain
RM11-1a) GN=AIM14 PE=3 SV=1
Length = 570
Score = 32.0 bits (71), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 70 TEQEDDLSTSEVGRSSSQSHEN-DNTSHSPTTVDDAERQIEGRESYTSSVKTVAFCVSTA 128
+++DLS S ++ S++N TSHSPT + + +++ + S+T S + +F +A
Sbjct: 472 NNEDEDLSISNFNSENADSNDNTPETSHSPTKENGSLIEVKSKHSFTLSSELKSFNNESA 531
>sp|A6ZU25|AIM14_YEAS7 Probable metalloreductase AIM14 OS=Saccharomyces cerevisiae (strain
YJM789) GN=AIM14 PE=3 SV=1
Length = 570
Score = 31.6 bits (70), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 70 TEQEDDLSTSEVGRSSSQSHEN-DNTSHSPTTVDDAERQIEGRESYTSSVKTVAFCVSTA 128
+++DLS S ++ S++N TSHSPT + + +++ + S+T S + +F +A
Sbjct: 472 NNEDEDLSISNFNSENADSNDNTPETSHSPTKENGSLIEVKSKHSFTLSNELKSFNNESA 531
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,184,756
Number of Sequences: 539616
Number of extensions: 4559610
Number of successful extensions: 13041
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 12975
Number of HSP's gapped (non-prelim): 60
length of query: 355
length of database: 191,569,459
effective HSP length: 118
effective length of query: 237
effective length of database: 127,894,771
effective search space: 30311060727
effective search space used: 30311060727
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)