Query 018462
Match_columns 355
No_of_seqs 249 out of 2065
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 15:39:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018462.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018462hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3psg_A Pepsinogen; hydrolase(a 100.0 9.4E-63 3.2E-67 466.7 27.6 311 32-350 1-330 (370)
2 2x0b_A Renin; hydrolase-hormon 100.0 7.6E-62 2.6E-66 461.6 27.5 319 30-350 6-343 (383)
3 1qdm_A Prophytepsin; aspartic 100.0 2.3E-58 7.7E-63 449.1 26.9 275 33-307 1-281 (478)
4 3cms_A Chymosin B; hydrolase, 100.0 8.2E-56 2.8E-60 412.5 28.8 275 67-350 3-287 (323)
5 4aa9_A Chymosin; hydrolase, as 100.0 4E-56 1.4E-60 414.2 25.7 273 69-350 2-284 (320)
6 1tzs_A Cathepsin E; hydrolase, 100.0 9.3E-56 3.2E-60 416.6 28.3 282 67-350 12-302 (351)
7 3k1w_A Renin; protease, altern 100.0 1.1E-55 3.8E-60 414.7 28.1 283 65-350 5-300 (341)
8 1dpj_A Proteinase A; proteinas 100.0 2.6E-55 8.8E-60 410.2 28.4 275 68-349 3-288 (329)
9 3qvc_A Histo-aspartic protease 100.0 2E-55 6.9E-60 424.7 27.8 275 65-350 124-412 (451)
10 1miq_A Plasmepsin; aspartic pr 100.0 5.9E-55 2E-59 414.0 28.3 274 66-350 50-337 (375)
11 1htr_B Gastricsin; aspartyl pr 100.0 3.9E-55 1.3E-59 409.0 25.1 275 69-350 4-288 (329)
12 1am5_A Pepsin, acid proteinase 100.0 6.4E-55 2.2E-59 406.7 26.1 273 69-350 3-284 (324)
13 2bju_A Plasmepsin II; aspartic 100.0 2.7E-54 9.2E-59 416.4 26.3 276 66-350 126-413 (453)
14 1b5f_A Protein (cardosin A); h 100.0 1.7E-53 6E-58 379.9 24.7 237 68-308 3-239 (239)
15 1mpp_A Pepsin; hydrolase(acid 100.0 4.6E-53 1.6E-57 399.8 28.4 280 66-350 6-320 (361)
16 1yg9_A Aspartic protease BLA G 100.0 3.9E-53 1.3E-57 395.4 25.1 272 67-350 6-293 (330)
17 2apr_A Rhizopuspepsin; hydrola 100.0 1.2E-51 4.2E-56 384.5 30.3 266 74-349 11-288 (325)
18 3fv3_A SAPP1P-secreted asparti 100.0 2.3E-51 8E-56 385.0 30.6 267 68-350 3-296 (339)
19 3c9x_A Trichoderma reesei aspa 100.0 8.9E-52 3E-56 386.1 26.7 267 74-349 11-293 (329)
20 1oew_A Endothiapepsin; hydrola 100.0 1E-51 3.4E-56 385.8 25.5 265 75-349 12-292 (329)
21 1j71_A Candidapepsin, aspartic 100.0 4.4E-51 1.5E-55 382.3 28.6 267 68-350 3-291 (334)
22 2qzx_A Candidapepsin-5; aspart 100.0 7.7E-51 2.6E-55 381.9 29.4 270 68-350 3-298 (342)
23 3pvk_A Candidapepsin-2; hydrol 100.0 1.4E-50 4.9E-55 380.1 28.4 270 69-350 4-298 (342)
24 1ibq_A Aspergillopepsin; aspar 100.0 1.4E-49 4.8E-54 370.6 25.4 263 76-350 12-289 (325)
25 1izd_A Aspartic proteinase; su 100.0 2.2E-49 7.4E-54 369.0 26.0 259 76-349 13-286 (323)
26 1bxo_A Protein (penicillopepsi 100.0 2.8E-49 9.4E-54 368.3 21.8 260 76-350 13-287 (323)
27 1wkr_A Polyporopepsin; hydrola 100.0 1.1E-47 3.6E-52 360.2 28.5 260 68-349 3-292 (340)
28 3lpj_A Beta-secretase 1; alzhe 100.0 7.6E-49 2.6E-53 381.5 18.3 273 70-348 66-383 (455)
29 2ewy_A Beta-secretase 2; BACE2 100.0 1.2E-47 4.2E-52 365.5 21.7 272 70-347 5-317 (383)
30 3vf3_A Beta-secretase 1; struc 100.0 2.8E-47 9.7E-52 365.2 20.5 270 72-347 22-336 (402)
31 2qp8_A Beta-secretase 1; BACE1 100.0 2.1E-46 7E-51 358.4 20.7 274 70-349 13-332 (395)
32 3aup_A SBG7S, BG, basic 7S glo 100.0 2.1E-44 7.2E-49 345.2 21.0 267 67-347 9-346 (403)
33 3vla_A EDGP; extracellular, in 100.0 2.8E-43 9.7E-48 337.4 14.7 258 67-334 8-348 (413)
34 1t6e_X Xylanase inhibitor; two 100.0 4.8E-40 1.6E-44 312.7 12.1 259 69-347 4-328 (381)
35 1lya_B Cathepsin D; lysosomal 100.0 1.8E-33 6.1E-38 251.0 20.1 191 159-350 1-201 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 5.7E-26 1.9E-30 172.4 10.7 92 69-160 4-96 (97)
37 1b5f_B Protein (cardosin A); h 95.9 0.0026 8.8E-08 46.1 1.4 42 309-350 1-48 (87)
38 2i1a_A DNA damage-inducible pr 94.9 0.035 1.2E-06 44.3 5.2 96 71-191 18-115 (148)
39 3s8i_A Protein DDI1 homolog 1; 92.1 0.16 5.4E-06 40.6 4.5 91 77-191 22-114 (148)
40 2hs1_A HIV-1 protease; ultra-h 85.1 1.3 4.3E-05 32.6 4.7 30 81-112 10-39 (99)
41 3vcm_P Prorenin; aspartic prot 82.6 1.2 4.1E-05 27.1 3.2 23 31-53 7-29 (43)
42 1fmb_A EIAV protease; hydrolas 82.5 1.5 5.2E-05 32.5 4.2 27 80-108 9-35 (104)
43 3liy_A Protease; hydrolase, hy 82.0 1.6 5.3E-05 32.8 4.1 32 81-112 12-46 (116)
44 3ec0_A Protease; HIV-2, inhibi 80.8 2.3 7.8E-05 31.2 4.6 29 81-111 10-38 (99)
45 1tzs_P Activation peptide from 75.1 1.9 6.5E-05 24.4 2.3 22 31-52 2-23 (35)
46 1htr_P Progastricsin (Pro segm 74.7 2.7 9.4E-05 25.0 3.1 22 32-53 2-23 (43)
47 2hah_A Protease, retropepsin; 71.6 4.2 0.00014 30.7 4.0 28 80-110 15-42 (116)
48 3s8i_A Protein DDI1 homolog 1; 70.8 3.5 0.00012 32.6 3.6 29 266-301 29-57 (148)
49 2i1a_A DNA damage-inducible pr 70.3 4.4 0.00015 31.7 4.2 29 266-301 31-59 (148)
50 3sqf_A Protease; folded monome 69.6 5.5 0.00019 29.9 4.2 30 81-112 11-40 (114)
51 1bxo_A Protein (penicillopepsi 64.8 8.6 0.00029 34.4 5.4 44 245-298 3-46 (323)
52 3slz_A GAG-Pro-POL polyprotein 63.8 9.7 0.00033 29.4 4.7 31 78-110 21-51 (132)
53 1ibq_A Aspergillopepsin; aspar 62.1 9.5 0.00032 34.1 5.2 43 246-298 3-45 (325)
54 1izd_A Aspartic proteinase; su 61.8 10 0.00036 33.8 5.4 43 246-298 4-46 (323)
55 2rsp_A RSV protease; hydrolase 56.0 13 0.00045 28.3 4.2 25 86-112 27-51 (124)
56 1lya_A Cathepsin D; lysosomal 55.4 9.8 0.00033 27.5 3.3 33 256-296 12-44 (97)
57 3ka2_A [L-Ala51;Gly51']HIV-1 p 50.1 16 0.00054 30.4 4.1 29 80-110 9-37 (203)
58 1oew_A Endothiapepsin; hydrola 49.8 21 0.00072 31.8 5.3 44 246-297 3-47 (329)
59 1mpp_A Pepsin; hydrolase(acid 48.8 18 0.0006 32.8 4.7 44 245-296 4-49 (361)
60 3c9x_A Trichoderma reesei aspa 48.4 23 0.00079 31.6 5.3 45 246-298 3-48 (329)
61 2apr_A Rhizopuspepsin; hydrola 45.5 26 0.00089 31.1 5.2 44 246-297 4-47 (325)
62 3cms_A Chymosin B; hydrolase, 40.0 18 0.00062 32.1 3.2 43 247-297 2-46 (323)
63 3ka2_A [L-Ala51;Gly51']HIV-1 p 31.0 61 0.0021 26.9 4.7 30 80-111 113-142 (203)
64 1fmb_A EIAV protease; hydrolas 29.6 31 0.0011 25.3 2.4 35 259-300 6-40 (104)
65 2hah_A Protease, retropepsin; 29.4 34 0.0012 25.6 2.7 30 258-295 11-40 (116)
66 1b5f_A Protein (cardosin A); h 29.2 62 0.0021 27.2 4.7 39 69-109 181-227 (239)
67 2hs1_A HIV-1 protease; ultra-h 28.6 29 0.00098 25.2 2.0 30 259-295 6-35 (99)
68 3aup_A SBG7S, BG, basic 7S glo 27.6 65 0.0022 29.5 4.9 41 67-109 217-276 (403)
69 1yg9_A Aspartic protease BLA G 25.5 45 0.0015 29.6 3.3 30 257-296 17-46 (330)
70 2qzx_A Candidapepsin-5; aspart 25.1 79 0.0027 28.0 4.9 33 256-296 11-43 (342)
71 3fv3_A SAPP1P-secreted asparti 24.4 64 0.0022 28.6 4.1 33 256-296 11-43 (339)
72 3pvk_A Candidapepsin-2; hydrol 23.7 55 0.0019 29.1 3.5 33 256-296 11-43 (342)
73 1am5_A Pepsin, acid proteinase 23.2 63 0.0022 28.5 3.8 34 256-297 11-44 (324)
74 1lya_B Cathepsin D; lysosomal 23.1 73 0.0025 26.6 4.0 28 83-110 107-138 (241)
No 1
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=9.4e-63 Score=466.73 Aligned_cols=311 Identities=34% Similarity=0.637 Sum_probs=273.4
Q ss_pred eEEEeeeeeechhhhHHhhhhhhhhhcccc------c-CC--CCceeEeceecCCceEEEEEEEcCCCcEEEEEEeCCCC
Q 018462 32 LLRIQLKKRQLGINTINAARLITKNEVHNR------F-NH--PKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSS 102 (355)
Q Consensus 32 ~~~ipl~~~~~~~~~~~~~~~~~~~~~~~~------~-~~--~~~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~ 102 (355)
++||||+|.++.|+.+++.+..++..+.++ + .. .....+||.|+.|.+|+++|+||||||+|+|+|||||+
T Consensus 1 ~~~ipl~~~~s~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs 80 (370)
T 3psg_A 1 LVKVPLVRKKSLRQNLIKDGKLKDFLKTHKHNPASKYFPEAAALIGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSS 80 (370)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHHHHHHHCCCCGGGGTCTTSCCSSCCCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCC
T ss_pred CEEEEeEEcCcHHHHHHhcCcHHHHHhhhhcchhhhhccccccccceecceeccCCEEEEEEEEcCCCCEEEEEEeCCCC
Confidence 479999999999999888776544322111 1 11 13567999999999999999999999999999999999
Q ss_pred ceeEeCCCCCCCcccCCCCcccCCCCcceeecCceEEEEeCCccEEEeEEEeeeeeeeeeecCcEEEEEEecCCcccccc
Q 018462 103 NLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLAL 182 (355)
Q Consensus 103 ~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~ 182 (355)
++||+|..|. +..|..|+.|+|++|+||+..++.|.+.|++|++.|.+++|+|+|++..+++|.||++....+..+...
T Consensus 81 ~lWV~s~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~~~~~ 159 (370)
T 3psg_A 81 NLWVPSVYCS-SLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYA 159 (370)
T ss_dssp CEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGC
T ss_pred ccEEECCCCC-CcccCCCCCCCCccCcCcEECCcEEEEEeCCceEEEEEEEEEEeeCCcccCCeEEEEEEeecccccccC
Confidence 9999999996 668999999999999999999999999999999999999999999999999999999988766567777
Q ss_pred ccceeeccccccccCCCCCchhHHHHHcCCCCccEEEEEecCCCCCCcccEEEECCcCCCCcccceEEEeccCcceeEEE
Q 018462 183 QFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIK 262 (355)
Q Consensus 183 ~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~~G~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~ 262 (355)
.++||||||++..+.....|++++|++||+|++++||+||++.. ..+|+|+|||+|+++|.|+++|+|+.++++|.|.
T Consensus 160 ~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~--~~~G~l~fGg~D~~~y~g~l~~~pv~~~~~w~v~ 237 (370)
T 3psg_A 160 PFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSND--DSGSVVLLGGIDSSYYTGSLNWVPVSVEGYWQIT 237 (370)
T ss_dssp SCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-------CEEEEETCCCGGGBSSCCEEEECSEETTEEEE
T ss_pred CccceeccCCccccccCCCCHHHHHHHCCCCCCCEEEEEEccCC--CCCeEEEEEeeChHhcCCcceeecccccceeEEE
Confidence 89999999999988877889999999999999999999999862 2389999999999999999999999999999999
Q ss_pred EeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHHHHHHHHhCCC----ceEEEeCCc------eecccCCEEEEEecC
Q 018462 263 VGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAE----GIVSMQCKT------VVFEYGNMIWEFLIS 332 (355)
Q Consensus 263 ~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~----~~~~v~C~~------i~~~fg~~~~~~~~~ 332 (355)
+++|+++++.+. +..++.|+|||||+++++|.+++++|.+++++. |.|.+||+. +.|.|||.+|+||++
T Consensus 238 l~~i~v~g~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~~g~~~v~C~~~~~lP~i~f~~~g~~~~l~~~ 316 (370)
T 3psg_A 238 LDSITMDGETIA-CSGGCQAIVDTGTSLLTGPTSAIANIQSDIGASENSDGEMVISCSSIDSLPDIVFTIDGVQYPLSPS 316 (370)
T ss_dssp ECEEESSSSEEE-CTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEECTTCCEECCGGGGGGCCCEEEEETTEEEEECHH
T ss_pred EeEEEECCEEEe-cCCCceEEEcCCCCcEECCHHHHHHHHHHhCCcccCCCcEEEECCCcccCCcEEEEECCEEEEECHH
Confidence 999999998775 567889999999999999999999999999884 789999984 789999999999999
Q ss_pred CcCccccccccCceEeCC
Q 018462 333 GVQPETVCSDIGLCVYNG 350 (355)
Q Consensus 333 ~~~~~~~~~~~~~C~~~~ 350 (355)
++.-. +.+.|+++.
T Consensus 317 ~yi~~----~~~~C~~~~ 330 (370)
T 3psg_A 317 AYILQ----DDDSCTSGF 330 (370)
T ss_dssp HHEEE----CSSCEEESE
T ss_pred Hhccc----CCCEEEEEE
Confidence 98322 456798653
No 2
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=7.6e-62 Score=461.59 Aligned_cols=319 Identities=35% Similarity=0.675 Sum_probs=251.4
Q ss_pred CceEEEeeeeeechhhhHHhhhh-hhhhhccccc--C----CCCceeEeceecCCceEEEEEEEcCCCcEEEEEEeCCCC
Q 018462 30 HGLLRIQLKKRQLGINTINAARL-ITKNEVHNRF--N----HPKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSS 102 (355)
Q Consensus 30 ~~~~~ipl~~~~~~~~~~~~~~~-~~~~~~~~~~--~----~~~~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~ 102 (355)
++++||||+|+++.|+.+++.+. .++..+.+.. . ......+||.|+.+.+|+++|+||||||+|+|+|||||+
T Consensus 6 ~~~~~i~l~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs 85 (383)
T 2x0b_A 6 TTFKRIFLKRMPSIRESLKERGVDMARLGPEWSQPMKRLTLGNTTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSS 85 (383)
T ss_dssp ---------------------------------------------CEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCC
T ss_pred CcEEEEEEEECCcHHHHHHHhCchHHHHHHhhccccccccccCCcceEeeeecCCCEEEEEEEECCCCcEEEEEEeCCCC
Confidence 35789999999998888776654 2222111100 0 023456899999999999999999999999999999999
Q ss_pred ceeEeCCCCCC-CcccCCCCcccCCCCcceeecCceEEEEeCCccEEEeEEEeeeeeeeeeecCcEEEEEEecCCccccc
Q 018462 103 NLWVPSSKCLF-SISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLA 181 (355)
Q Consensus 103 ~~wv~~~~C~~-~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~ 181 (355)
++||+|..|.. ...|..|+.|+|++|+||+..++.|.++|++|+++|.+++|+|+|++..++ |.||++....+..|..
T Consensus 86 ~lWV~s~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~g~~f~~ 164 (383)
T 2x0b_A 86 NVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITVT-QMFGEVTEMPALPFML 164 (383)
T ss_dssp CEEEEBTTSCTTSHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEEEEEEEEEEEETTEEEE-EEEEEEEECCHHHHTT
T ss_pred CeEEeccCCCCCcccccCCCCCCCCCCCcEEECCcEEEEEcCCccEEEEEEeeEEEEcCceEE-EEEEEEEecCCccccc
Confidence 99999999962 358999999999999999999999999999999999999999999999999 9999999876655666
Q ss_pred cccceeeccccccccCCCCCchhHHHHHcCCCCccEEEEEecCCCCCC--cccEEEECCcCCCCcccceEEEeccCccee
Q 018462 182 LQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPNSE--VGGEIIFGGFDWRHFRGSHIYVPITEKGYW 259 (355)
Q Consensus 182 ~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~--~~G~l~~Gg~d~~~~~g~l~~~p~~~~~~w 259 (355)
..++||||||++..+.....|++++|++||+|++++||+||++..+.. .+|+|+|||+|+++|.|+++|+|+.+++||
T Consensus 165 ~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~~~w 244 (383)
T 2x0b_A 165 AEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVW 244 (383)
T ss_dssp CSSSEEEECSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSSTTSC
T ss_pred CCCceEeccCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCCceE
Confidence 788999999999988777889999999999999999999999864321 389999999999999999999999999999
Q ss_pred EEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHHHHHHHHhCCC---ceEEEeCC------ceecccCCEEEEEe
Q 018462 260 QIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAE---GIVSMQCK------TVVFEYGNMIWEFL 330 (355)
Q Consensus 260 ~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~---~~~~v~C~------~i~~~fg~~~~~~~ 330 (355)
.|.+++|.|+++.+. +..++.|+|||||+++++|.+++++|.+++++. |.|.++|+ .+.|.|||..|+||
T Consensus 245 ~v~l~~i~v~~~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~g~~~v~C~~~~~~P~i~f~~~g~~~~l~ 323 (383)
T 2x0b_A 245 QIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLMEALGAKKRLFDYVVKCNEGPTLPDISFHLGGKEYTLT 323 (383)
T ss_dssp EEEECEEEESSCCCB-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEECSSCEEEEGGGTTTCCCEEEEETTEEEEEC
T ss_pred EEEEeEEEeCCceEE-cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcccCCcEEEeccccccCceEEEEECCEEEEEC
Confidence 999999999998752 567899999999999999999999999999873 78999998 37899999999999
Q ss_pred cCCcCccccccccCceEeCC
Q 018462 331 ISGVQPETVCSDIGLCVYNG 350 (355)
Q Consensus 331 ~~~~~~~~~~~~~~~C~~~~ 350 (355)
++++.-.....+.+.|+++.
T Consensus 324 ~~~yi~~~~~~~~~~C~~~~ 343 (383)
T 2x0b_A 324 SADYVFQESYSSKKLCTLAI 343 (383)
T ss_dssp HHHHBCCCCCCTTSEEEBSE
T ss_pred HHHhEeeccCCCCCeEEEEE
Confidence 99983332222356898643
No 3
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=2.3e-58 Score=449.08 Aligned_cols=275 Identities=56% Similarity=1.067 Sum_probs=237.5
Q ss_pred EEEeeeeeechhhhHHhhhhhh---h-hhc-ccccCC-CCceeEeceecCCceEEEEEEEcCCCcEEEEEEeCCCCceeE
Q 018462 33 LRIQLKKRQLGINTINAARLIT---K-NEV-HNRFNH-PKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWV 106 (355)
Q Consensus 33 ~~ipl~~~~~~~~~~~~~~~~~---~-~~~-~~~~~~-~~~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv 106 (355)
+||||+|++..++.+++.+..+ + ..+ +..... .....+||.|+.+.+|+++|+||||||+|.|+|||||+++||
T Consensus 1 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV 80 (478)
T 1qdm_A 1 VRIALKKRPIDRNSRVATGLSGGEEQPLLSGANPLRSEEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWV 80 (478)
T ss_dssp CEEEEEECCCCHHHHHHHHTC----------------CCSSCSGGGCCGGGCCEEEEEEETTTTEEEEEEEETTCCCCEE
T ss_pred CeeeeeeccchHHHHHhcchhhhhHHHHHhhcccccCcCCCceEEeEeccCCEEEEEEEECCCCeEEEEEEcCCCcceEE
Confidence 4899999999988888766331 1 111 111221 345679999999999999999999999999999999999999
Q ss_pred eCCCCCCCcccCCCCcccCCCCcceeecCceEEEEeCCccEEEeEEEeeeeeeeeeecCcEEEEEEecCCccccccccce
Q 018462 107 PSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDG 186 (355)
Q Consensus 107 ~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~G 186 (355)
++..|..+..|..|+.|+|++|+||+..++.|.+.|++|+++|.+++|+|+|++..+++|.||++....+..|....++|
T Consensus 81 ~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~f~~~~~dG 160 (478)
T 1qdm_A 81 PSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVAKFDG 160 (478)
T ss_dssp EBTTCCSCGGGGGSCCBCGGGCTTCBCCCCEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCBSHHHHCSSSE
T ss_pred ecCCCCCCccccCCCCCCcccCCCeeeCCcEEEEEcCCCCeEEEEEEEEEEECCeEECCEEEEEEEecCCcccccccccc
Confidence 99999755689999999999999999999999999999999999999999999999999999999887655566677899
Q ss_pred eeccccccccCCCCCchhHHHHHcCCCCccEEEEEecCCCCCCcccEEEECCcCCCCcccceEEEeccCcceeEEEEeeE
Q 018462 187 ILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDI 266 (355)
Q Consensus 187 ilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~~G~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i 266 (355)
|||||++..+.....|++++|++||+|++++||+||++..+....|+|+|||+|+++|.|+++|+|+...+||.|.+++|
T Consensus 161 IlGLg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~~~w~v~l~~i 240 (478)
T 1qdm_A 161 ILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQFDMGDV 240 (478)
T ss_dssp EEECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEETTEEEEECCE
T ss_pred eecccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCCCeEEEEEeEE
Confidence 99999999887777889999999999999999999998643344899999999999999999999999899999999999
Q ss_pred EEcCeEeEeecCCeeEEEccCccCcccCHHHHHHHHHHhCC
Q 018462 267 LIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGA 307 (355)
Q Consensus 267 ~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~ 307 (355)
.|+++.+.++..++.++|||||+++++|.+++++|.++|++
T Consensus 241 ~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a 281 (478)
T 1qdm_A 241 LVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGA 281 (478)
T ss_dssp EETTEECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHTC
T ss_pred EECCEEEeecCCCceEEEcCCCCceeCCHHHHHHHHHHhCc
Confidence 99998875556778999999999999999999999998865
No 4
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=8.2e-56 Score=412.47 Aligned_cols=275 Identities=37% Similarity=0.705 Sum_probs=249.6
Q ss_pred ceeEeceecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCCCcccCCCCcccCCCCcceeecCceEEEEeCCcc
Q 018462 67 ADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQ 146 (355)
Q Consensus 67 ~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~ 146 (355)
...+||.|+.+.+|+++|+||||||++.|+|||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 3 ~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 81 (323)
T 3cms_A 3 VASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTGS 81 (323)
T ss_dssp CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEE
T ss_pred cceeeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCC-cccccCCCCCCCccCCCeEECCcEEEEEeCCCC
Confidence 4568999999999999999999999999999999999999999995 568999999999999999999999999999999
Q ss_pred EEEeEEEeeeeeeeeeecCcEEEEEEecCCccccccccceeeccccccccCCCCCchhHHHHHcCCCCccEEEEEecCCC
Q 018462 147 ISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDP 226 (355)
Q Consensus 147 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~ 226 (355)
+.|.+++|+|+|++..++++.||++....+..+....++||||||++..+.....+++++|++||+|.+++||+||++..
T Consensus 82 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~ 161 (323)
T 3cms_A 82 MQGILGYDTVTVSNIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNG 161 (323)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTS
T ss_pred eEEEEEEEEEEECCeEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHHHHHCCCCCCCEEEEEECCCC
Confidence 99999999999999999999999999876544555678999999999988877889999999999999999999998863
Q ss_pred CCCcccEEEECCcCCCCcccceEEEeccCcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHHHHHHHHhC
Q 018462 227 NSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIG 306 (355)
Q Consensus 227 ~~~~~G~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~ 306 (355)
. .|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+. +..+..++|||||+++++|.+++++|.++++
T Consensus 162 ~---~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 237 (323)
T 3cms_A 162 Q---ESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVA-CEGGCQAILDTGTSKLVGPSSDILNIQQAIG 237 (323)
T ss_dssp S---CEEEEESCCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE-STTCEEEEECTTCCSEEECHHHHHHHHHHHT
T ss_pred C---CEEEEECCCChhhccCceEEEECccCCeEEEEEeeEEECCEEee-cCCCcEEEEecCCccEeCCHHHHHHHHHHhC
Confidence 2 39999999999999999999999999999999999999998764 4567899999999999999999999999998
Q ss_pred CC----ceEEEeCC------ceecccCCEEEEEecCCcCccccccccCceEeCC
Q 018462 307 AE----GIVSMQCK------TVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNG 350 (355)
Q Consensus 307 ~~----~~~~v~C~------~i~~~fg~~~~~~~~~~~~~~~~~~~~~~C~~~~ 350 (355)
+. +.|.++|+ .+.|.||+..|+||++++. .. +.+.|+++.
T Consensus 238 ~~~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~---~~-~~~~C~~~i 287 (323)
T 3cms_A 238 ATQNQYGEFDIDCDNLSYMPTVVFEINGKMYPLTPSAYT---SQ-DQGFCTSGF 287 (323)
T ss_dssp CEEETTTEEEECTTCTTTSCCEEEEETTEEEEECHHHHE---EE-ETTEEEESE
T ss_pred CeecCCCcEEEECCCCccCceEEEEECCEEEEECHHHhc---cC-CCCEEEEEE
Confidence 75 78999998 3789999999999999983 22 567898653
No 5
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=4e-56 Score=414.17 Aligned_cols=273 Identities=38% Similarity=0.707 Sum_probs=244.8
Q ss_pred eEeceecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCCCcccCCCCcccCCCCcceeecCceEEEEeCCccEE
Q 018462 69 VVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQIS 148 (355)
Q Consensus 69 ~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~~ 148 (355)
.+||.|+.|.+|+++|+||||||+++|++||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|+++
T Consensus 2 ~~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 80 (320)
T 4aa9_A 2 REPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCK-SNVCKNHHRFDPRKSSTFRNLGKPLSIHYGTGSME 80 (320)
T ss_dssp ------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred CccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCC-ccccCCCCCCCCCCCcCeEcCCcEEEEEECCcEEE
Confidence 47999999999999999999999999999999999999999997 56799999999999999999999999999999999
Q ss_pred EeEEEeeeeeeeeeecCcEEEEEEecCCccccccccceeeccccccccCCCCCchhHHHHHcCCCCccEEEEEecCCCCC
Q 018462 149 GFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPNS 228 (355)
Q Consensus 149 G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~ 228 (355)
|.+++|+|+|++..++++.||++....+..+....++||||||++..+.....+++++|++||+|++++||+||.+.
T Consensus 81 G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~--- 157 (320)
T 4aa9_A 81 GFLGYDTVTVSNIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVARDLFSVYMDRN--- 157 (320)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCSS---
T ss_pred EEEEEEEEEECCEeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHHHhCCCCCCceEEEEeCCC---
Confidence 99999999999999999999999987665566667899999999998887788999999999999999999999985
Q ss_pred CcccEEEECCcCCCCcccceEEEeccCcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHHHHHHHHhCCC
Q 018462 229 EVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAE 308 (355)
Q Consensus 229 ~~~G~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~ 308 (355)
...|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.++++.+. +..+..++|||||+++++|++++++|.+++++.
T Consensus 158 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~ 236 (320)
T 4aa9_A 158 GQGSMLTLGAIDPSYYTGSLHWVPVTLQQYWQFTVDSVTINGVAVA-CVGGCQAILDTGTSVLFGPSSDILKIQMAIGAT 236 (320)
T ss_dssp SSCCEEEETCCCGGGEEEEEEEEECSSBTTBEEEECEEEETTEEEE-STTCEEEEECTTCSSEEEEHHHHHHHHHHTTCE
T ss_pred CCCeEEEEcccCHHHccCceEEEEcccCCceEEEEeEEEECCEEec-cCCCcEEEEECCCCcEECCHHHHHHHHHHhCCc
Confidence 2389999999999999999999999999999999999999998875 456789999999999999999999999999874
Q ss_pred ----ceEEEeCCc------eecccCCEEEEEecCCcCccccccccCceEeCC
Q 018462 309 ----GIVSMQCKT------VVFEYGNMIWEFLISGVQPETVCSDIGLCVYNG 350 (355)
Q Consensus 309 ----~~~~v~C~~------i~~~fg~~~~~~~~~~~~~~~~~~~~~~C~~~~ 350 (355)
+.|.+||+. +.|.||+.+|+||++++.. .+.+.|+++.
T Consensus 237 ~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~----~~~~~C~~~i 284 (320)
T 4aa9_A 237 ENRYGEFDVNCGNLRSMPTVVFEINGRDYPLSPSAYTS----KDQGFCTSGF 284 (320)
T ss_dssp ECTTSCEEECGGGGGGCCCEEEEETTEEEEECHHHHEE----EETTEEEESE
T ss_pred ccCCCcEEEeCCCCCcCceEEEEECCEEEEECHHHhcc----CCCCeEEEEE
Confidence 889999984 7889999999999999842 2567898753
No 6
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=9.3e-56 Score=416.62 Aligned_cols=282 Identities=39% Similarity=0.761 Sum_probs=248.4
Q ss_pred ceeEeceecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCCCcccCCCCcccCCCCcceeecCceEEEEeCCcc
Q 018462 67 ADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQ 146 (355)
Q Consensus 67 ~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~ 146 (355)
...+||.|+.+.+|+++|+||||||+|.|+|||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 12 ~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 90 (351)
T 1tzs_A 12 SAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCT-SPACKTHSRFQPSQSSTYSQPGQSFSIQYGTGS 90 (351)
T ss_dssp --CCTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCBCCSCEEEEESSSCE
T ss_pred ccceeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-ccccCCCCcCCcccCcceEECCCEEEEEeCCCC
Confidence 4458899999999999999999999999999999999999999996 568999999999999999999999999999999
Q ss_pred EEEeEEEeeeeeeeeeecCcEEEEEEecCCccccccccceeeccccccccCCCCCchhHHHHHcCCCCccEEEEEecCCC
Q 018462 147 ISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDP 226 (355)
Q Consensus 147 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~ 226 (355)
+.|.+++|+|+|++..++++.||++....+..+....++||||||++..+.....+++++|++||+|++++||+||++..
T Consensus 91 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~ 170 (351)
T 1tzs_A 91 LSGIIGADQVSVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNP 170 (351)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC
T ss_pred eEEEEEEeEEEECCeEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCCC
Confidence 99999999999999999999999998766555556778999999999888777788999999999999999999999875
Q ss_pred CCCcccEEEECCcCCCCcccceEEEeccCcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHHHHHHHHhC
Q 018462 227 NSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIG 306 (355)
Q Consensus 227 ~~~~~G~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~ 306 (355)
+....|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|+|+++.+. +..+..++|||||+++++|.+++++|.++++
T Consensus 171 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~ 249 (351)
T 1tzs_A 171 EGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVMF-CSEGCQAIVDTGTSLITGPSDKIKQLQNAIG 249 (351)
T ss_dssp --CTTCEEEETSCCGGGBCSCCEEEECSEETTEEEEEEEEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHHHHHT
T ss_pred CCCCCCEEEECCCCHHHcCCceEEEecCCCceEEEEeCEEEECCceEE-cCCCceEEeccCCcceeCCHHHHHHHHHHhC
Confidence 433489999999999999999999999999999999999999998753 5677899999999999999999999999998
Q ss_pred CC---ceEEEeCCc------eecccCCEEEEEecCCcCccccccccCceEeCC
Q 018462 307 AE---GIVSMQCKT------VVFEYGNMIWEFLISGVQPETVCSDIGLCVYNG 350 (355)
Q Consensus 307 ~~---~~~~v~C~~------i~~~fg~~~~~~~~~~~~~~~~~~~~~~C~~~~ 350 (355)
+. +.|.++|+. +.|.|||..|+||++++.-.....+.+.|+++.
T Consensus 250 ~~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~yi~~~~~~~~~~C~~~~ 302 (351)
T 1tzs_A 250 AAPVDGEYAVECANLNVMPDVTFTINGVPYTLSPTAYTLLDFVDGMQFCSSGF 302 (351)
T ss_dssp CEECSSSEEECGGGGGGSCCEEEEETTEEEEECTTTSEECC-----CCEEESE
T ss_pred CcccCCeEEEeCCCCccCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEEE
Confidence 75 679999983 788999999999999983322222356898643
No 7
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=1.1e-55 Score=414.74 Aligned_cols=283 Identities=38% Similarity=0.766 Sum_probs=251.8
Q ss_pred CCceeEeceecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCC-CcccCCCCcccCCCCcceeecCceEEEEeC
Q 018462 65 PKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLF-SISCYLHSRYRARLSRTYTKIGVPCKIHYG 143 (355)
Q Consensus 65 ~~~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~-~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~ 143 (355)
++...+||.|+.|.+|+++|+||||||+++|++||||+++||++..|.. ...|..++.|+|++|+||+..++.|.+.|+
T Consensus 5 ~~~~~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg 84 (341)
T 3k1w_A 5 NTTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYS 84 (341)
T ss_dssp CBCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEEET
T ss_pred CCCccccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCCCCCCCCcCcCeeECCCEEEEEEC
Confidence 3567799999999999999999999999999999999999999999963 347988999999999999999999999999
Q ss_pred CccEEEeEEEeeeeeeeeeecCcEEEEEEecCCccccccccceeeccccccccCCCCCchhHHHHHcCCCCccEEEEEec
Q 018462 144 SGQISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLN 223 (355)
Q Consensus 144 ~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~ 223 (355)
+|++.|.+++|+|+|++..+ ++.||++.......+....++||||||++..+.....|++++|++||+|++++||+||.
T Consensus 85 ~gs~~G~~~~D~v~ig~~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~ 163 (341)
T 3k1w_A 85 TGTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYN 163 (341)
T ss_dssp TEEEEEEEEEEEEEETTEEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEEC
T ss_pred CcEEEEEEEEEEEEECCcee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEe
Confidence 99999999999999999999 99999999876544566678999999999888777889999999999999999999999
Q ss_pred CCC--CCCcccEEEECCcCCCCcccceEEEeccCcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHHHHH
Q 018462 224 QDP--NSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQI 301 (355)
Q Consensus 224 ~~~--~~~~~G~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i 301 (355)
+.. +....|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.++++.+. +.....++|||||+++++|++++++|
T Consensus 164 ~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i 242 (341)
T 3k1w_A 164 RDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKL 242 (341)
T ss_dssp CCC-----CCEEEEESSCCGGGEEEEEEEEECSSTTSCEEEECCEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHH
T ss_pred CCCCcCCCCCCEEEECccChHHccCceEEEecCCCCEEEEEEeEEEECCEEee-cCCCCEEEEECCCChhcCCHHHHHHH
Confidence 864 223489999999999999999999999999999999999999998753 56678999999999999999999999
Q ss_pred HHHhCCC----ceEEEeCC------ceecccCCEEEEEecCCcCccccccccCceEeCC
Q 018462 302 NHAIGAE----GIVSMQCK------TVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNG 350 (355)
Q Consensus 302 ~~~i~~~----~~~~v~C~------~i~~~fg~~~~~~~~~~~~~~~~~~~~~~C~~~~ 350 (355)
.+++++. | |.+||+ .+.|.||+.+|+||++++.-.....+.+.|++..
T Consensus 243 ~~~~~~~~~~~g-~~~~C~~~~~~p~i~f~f~g~~~~l~~~~~~~~~~~~~~~~C~~~i 300 (341)
T 3k1w_A 243 MEALGAKKRLFD-YVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAI 300 (341)
T ss_dssp HHHHTCEECSSC-EEEEGGGGGGCCCEEEEETTEEEEECHHHHBCCSCCCTTSEEEBSE
T ss_pred HHHcCCeecCCC-eEEeCCCCCcCCcEEEEECCEEEEECHHHheeEccCCCCCeEEeEE
Confidence 9999874 6 999998 3788999999999999984333333477898754
No 8
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=2.6e-55 Score=410.19 Aligned_cols=275 Identities=38% Similarity=0.749 Sum_probs=246.2
Q ss_pred eeEeceecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCCCcccCCCCcccCCCCcceeecCceEEEEeCCccE
Q 018462 68 DVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQI 147 (355)
Q Consensus 68 ~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~ 147 (355)
..+||.|+.+.+|+++|+||||||+|.|+|||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|++
T Consensus 3 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~ 81 (329)
T 1dpj_A 3 HDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECG-SLACFLHSKYDHEASSSYKANGTEFAIQYGTGSL 81 (329)
T ss_dssp EEEECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEE
T ss_pred cceeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCC-CcccCCcCcCCcccCcCeEECCcEEEEEECCceE
Confidence 458999999999999999999999999999999999999999997 4469889999999999999999999999999999
Q ss_pred EEeEEEeeeeeeeeeecCcEEEEEEecCCccccccccceeeccccccccCCCCCchhHHHHHcCCCCccEEEEEecCCCC
Q 018462 148 SGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPN 227 (355)
Q Consensus 148 ~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~ 227 (355)
.|.+++|+|+|++..++++.||++....+..+....++||||||++..+.....+++++|++||+|++++||+||.+...
T Consensus 82 ~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~ 161 (329)
T 1dpj_A 82 EGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSK 161 (329)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGG
T ss_pred EEEEEEEEEEECCeEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCC
Confidence 99999999999999999999999988654345556789999999998877777889999999999999999999987532
Q ss_pred -CCcccEEEECCcCCCCcccceEEEeccCcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHHHHHHHHhC
Q 018462 228 -SEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIG 306 (355)
Q Consensus 228 -~~~~G~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~ 306 (355)
....|+|+|||+|+++|.|+++|+|+.++++|.|.+++|+++++.+. ..+..++|||||+++++|++++++|.++++
T Consensus 162 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 239 (329)
T 1dpj_A 162 DTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAE--LESHGAAIDTGTSLITLPSGLAEMINAEIG 239 (329)
T ss_dssp TCSSSEEEEESSCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE--CSSCEEEECTTCSCEEECHHHHHHHHHHHT
T ss_pred CCCCCcEEEEcCCChhhcCCceEEEEcCCCceEEEEeeeEEECCeEec--CCCccEEeeCCCCcEECCHHHHHHHHHHhC
Confidence 22479999999999999999999999999999999999999998763 456799999999999999999999999998
Q ss_pred CC----ceEEEeCC------ceecccCCEEEEEecCCcCccccccccCceEeC
Q 018462 307 AE----GIVSMQCK------TVVFEYGNMIWEFLISGVQPETVCSDIGLCVYN 349 (355)
Q Consensus 307 ~~----~~~~v~C~------~i~~~fg~~~~~~~~~~~~~~~~~~~~~~C~~~ 349 (355)
+. +.|.+||+ .+.|.|++..|+||++++.-. . .+.|++.
T Consensus 240 ~~~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~---~-~~~C~~~ 288 (329)
T 1dpj_A 240 AKKGWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYDYTLE---V-SGSCISA 288 (329)
T ss_dssp CEECTTSSEEECGGGGGGCCCEEEEETTEEEEECTTTSEEE---E-TTEEEEC
T ss_pred CccCCCCeEEEECCCCCcCCcEEEEECCEEEEECHHHhEec---C-CCEEEEE
Confidence 74 78999998 478899999999999998322 2 2689864
No 9
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=2e-55 Score=424.73 Aligned_cols=275 Identities=30% Similarity=0.519 Sum_probs=246.5
Q ss_pred CCceeEeceecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCCCcccCCCCcccCCCCcceeecCceEEEEeCC
Q 018462 65 PKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGS 144 (355)
Q Consensus 65 ~~~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~ 144 (355)
+....+||.|+.|.+|+++|+||||||++.|++||||+++||++..|. +..|..++.|+|++|+||+..++.|.+.|++
T Consensus 124 ~~~~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~-s~~C~~~~~ydps~SsT~~~~~~~f~i~Ygd 202 (451)
T 3qvc_A 124 SEFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT-SESCESKNHYDSSKSKTYEKDDTPVKLTSKA 202 (451)
T ss_dssp ---CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEECSS
T ss_pred ccCCccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-ccccCCCCCCCCCCCcccccCCCEEEEEECC
Confidence 356679999999999999999999999999999999999999999996 5689999999999999999999999999999
Q ss_pred ccEEEeEEEeeeeeeeeeecCcEEEEEEe----cCCccccccccceeeccccccccCCCCCchhHHHHHcCCCCccEEEE
Q 018462 145 GQISGFFSQDNVKIGDMIIKDQEFVEVTK----EGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSL 220 (355)
Q Consensus 145 g~~~G~~~~D~v~ig~~~~~~~~fg~~~~----~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~ 220 (355)
|++.|.+++|+|++|+..++ +.||++.. .++ +....++||||||++..+.....|++++|++||+|++++||+
T Consensus 203 Gs~~G~~~~Dtv~igg~~v~-~~Fg~a~~t~~~~~~--f~~~~~dGILGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS~ 279 (451)
T 3qvc_A 203 GTISGIFSKDLVTIGKLSVP-YKFIEMTEIVGFEPF--YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSI 279 (451)
T ss_dssp EEEEEEEEEEEEEETTEEEE-EEEEEEEEEEECTTH--HHHSCCCEEEECSSBCSSSSCCCCHHHHHHHTTSSSSSEEEE
T ss_pred CEEEEEEEEEEEEECCEEEE-EEEEEEEeccccCCC--ccCCCCCEEEecCCCcccccCCCCHHHHHHHcCCCCCCEEEE
Confidence 99999999999999999999 99999987 543 555678999999999988877889999999999999999999
Q ss_pred EecCCCCCCcccEEEECCcCCCCcccceEEEeccCcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHHHH
Q 018462 221 WLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQ 300 (355)
Q Consensus 221 ~l~~~~~~~~~G~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~ 300 (355)
||++.. ...|+|+|||+|+++|.|+++|+|+.++++|.|.++ |.++++ +.....++|||||+++++|++++++
T Consensus 280 ~L~~~~--~~~G~l~fGgiD~s~y~G~l~~~pv~~~~~w~v~l~-I~Vgg~----~~~~~~aiiDSGTt~i~lP~~~~~~ 352 (451)
T 3qvc_A 280 YLPPEN--KNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNV----SSKKANVILDSATSVITVPTEFFNQ 352 (451)
T ss_dssp ECCTTC--TTEEEEEESSCCGGGEEEEEEEEECSSTTSSEEEEE-EEETTE----EEEEEEEEECTTBSSEEECHHHHHH
T ss_pred EEcCCC--CCCCEEEECCcchhhcCCceEEEEcccCCeeEEEEE-EEECCc----cCCCceEEEeCCCccccCCHHHHHH
Confidence 999873 238999999999999999999999999999999999 999998 3456789999999999999999999
Q ss_pred HHHHhCCC-----ceEEEeCC-----ceecccCCEEEEEecCCcCccccccccCceEeCC
Q 018462 301 INHAIGAE-----GIVSMQCK-----TVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNG 350 (355)
Q Consensus 301 i~~~i~~~-----~~~~v~C~-----~i~~~fg~~~~~~~~~~~~~~~~~~~~~~C~~~~ 350 (355)
|.+++++. |.|.+||+ .+.|.|||.+|+||++++.-.....+.+.|++..
T Consensus 353 i~~~i~a~~~~~~g~y~v~C~~~~~P~itf~fgg~~i~lp~~~yi~~~~~~~~~~C~~~i 412 (451)
T 3qvc_A 353 FVESASVFKVPFLSLYVTTCGNTKLPTLEYRSPNKVYTLEPKQYLEPLENIFSALCMLNI 412 (451)
T ss_dssp HHTTTTCEECTTSSCEEEETTCTTCCCEEEEETTEEEEECHHHHEEECTTTSTTEEEECE
T ss_pred HHHHcCCeecCCCCeEEeeCCcCcCCcEEEEECCEEEEEcHHHheeecccCCCCeEEEEE
Confidence 99999874 88999997 4789999999999999983322223568898754
No 10
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=5.9e-55 Score=413.98 Aligned_cols=274 Identities=30% Similarity=0.599 Sum_probs=245.6
Q ss_pred CceeEeceecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCCCcccCCCCcccCCCCcceeecCceEEEEeCCc
Q 018462 66 KADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSG 145 (355)
Q Consensus 66 ~~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g 145 (355)
....+||.|+.+.+|+++|+||||||+|.|+|||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|
T Consensus 50 ~~~~~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 128 (375)
T 1miq_A 50 ENDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCN-SSGCSIKNLYDSSKSKSYEKDGTKVDITYGSG 128 (375)
T ss_dssp TTBCCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCC-SSGGGGSCCBCGGGCTTCEEEEEEEEEEETTE
T ss_pred CcceEEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCC-cccccCCCcCCCccCCceEECCcEEEEEeCCC
Confidence 34558999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred cEEEeEEEeeeeeeeeeecCcEEEEEEe----cCCccccccccceeeccccccccCCCCCchhHHHHHcCCCCccEEEEE
Q 018462 146 QISGFFSQDNVKIGDMIIKDQEFVEVTK----EGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLW 221 (355)
Q Consensus 146 ~~~G~~~~D~v~ig~~~~~~~~fg~~~~----~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~ 221 (355)
++.|.+++|+|+|++..+++ .||++.. .. .|....++||||||++..+.....|++++|++||+|++++||+|
T Consensus 129 s~~G~~~~Dtv~ig~~~v~~-~Fg~~~~~~~~~~--~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~ 205 (375)
T 1miq_A 129 TVKGFFSKDLVTLGHLSMPY-KFIEVTDTDDLEP--IYSSVEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFY 205 (375)
T ss_dssp EEEEEEEEEEEEETTEEEEE-EEEEEEECGGGTT--HHHHSCCCEEEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEE
T ss_pred eEEEEEEEEEEEEcCceECc-EEEEEEecccccc--ccccCCCceEEeCCCCcccccCCCCHHHHHHhccCcCCCEEEEE
Confidence 99999999999999999999 9999987 43 45456789999999999888778899999999999999999999
Q ss_pred ecCCCCCCcccEEEECCcCCCCcccceEEEeccCcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHHHHH
Q 018462 222 LNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQI 301 (355)
Q Consensus 222 l~~~~~~~~~G~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i 301 (355)
|.+... ..|+|+|||+|+++|.|+++|+|+.+.++|.|.++ |.|+++.+ .++.++|||||+++++|.+++++|
T Consensus 206 L~~~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~-i~v~g~~~----~~~~aiiDSGTs~~~lP~~~~~~l 278 (375)
T 1miq_A 206 LPVHDV--HAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLD-VHFGKQTM----EKANVIVDSGTTTITAPSEFLNKF 278 (375)
T ss_dssp CCTTCT--TEEEEEESSCCGGGEEEEEEEEEBSSSSSSEEEEE-EEETTEEE----EEEEEEECTTBSSEEECHHHHHHH
T ss_pred ecCCCC--CCeEEEEcccCHHHcCCceEEEecCCCceEEEEEE-EEECCEEc----ccceEEecCCCccEEcCHHHHHHH
Confidence 998632 48999999999999999999999999999999999 99999876 457899999999999999999999
Q ss_pred HHHhCCC-----ceEEEeCCc-----eecccCCEEEEEecCCcCccccccccCceEeCC
Q 018462 302 NHAIGAE-----GIVSMQCKT-----VVFEYGNMIWEFLISGVQPETVCSDIGLCVYNG 350 (355)
Q Consensus 302 ~~~i~~~-----~~~~v~C~~-----i~~~fg~~~~~~~~~~~~~~~~~~~~~~C~~~~ 350 (355)
.+++++. |.|.++|+. +.|.|||..|+||++++.-.....+.+.|+++.
T Consensus 279 ~~~~~~~~~~~~g~~~~~C~~~~~P~i~f~f~g~~~~l~~~~yi~~~~~~g~~~C~~~~ 337 (375)
T 1miq_A 279 FANLNVIKVPFLPFYVTTCDNKEMPTLEFKSANNTYTLEPEYYMNPILEVDDTLCMITM 337 (375)
T ss_dssp HHHHTCEECTTSSCEEEETTCTTCCCEEEECSSCEEEECGGGSEEESSSSSCSEEEESE
T ss_pred HHHhCCcccCCCCeEEEECCCCCCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEEE
Confidence 9999882 779999984 789999999999999983322112456898754
No 11
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=3.9e-55 Score=408.99 Aligned_cols=275 Identities=37% Similarity=0.727 Sum_probs=246.5
Q ss_pred eEeceecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCCCcccCCCCcccCCCCcceeecCceEEEEeCCccEE
Q 018462 69 VVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQIS 148 (355)
Q Consensus 69 ~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~~ 148 (355)
.+||. +.+.+|+++|+||||||++.|+|||||+++||+|..|. +..|..++.|+|++|+||+..++.|.+.|++|++.
T Consensus 4 ~~~l~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 81 (329)
T 1htr_B 4 YEPMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLT 81 (329)
T ss_dssp CCGGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred eeeeE-EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-CcccCCCCcCCCccCCCeEECCcEEEEEeCCCCeE
Confidence 37888 88999999999999999999999999999999999996 45798899999999999999999999999999999
Q ss_pred EeEEEeeeeeeeeeecCcEEEEEEecCCccccccccceeeccccccccCCCCCchhHHHHHcCCCCccEEEEEecCCCCC
Q 018462 149 GFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPNS 228 (355)
Q Consensus 149 G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~ 228 (355)
|.+++|+|+|++..++++.||++....+..+....++||||||++..+.....|++++|++||+|++++||+||++....
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~ 161 (329)
T 1htr_B 82 GFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGS 161 (329)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSS
T ss_pred EEEEeeeEEEcceEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCC
Confidence 99999999999999999999999876654555667899999999998877788999999999999999999999986432
Q ss_pred CcccEEEECCcCCCCcccceEEEeccCcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHHHHHHHHhCCC
Q 018462 229 EVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAE 308 (355)
Q Consensus 229 ~~~G~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~ 308 (355)
..|+|+|||+|+++|+|+++|+|+.++++|.|.+++|+|+++.+..+..+..++|||||+++++|++++++|.+++++.
T Consensus 162 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 240 (329)
T 1htr_B 162 -SGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQ 240 (329)
T ss_dssp -EEEEEEESSCCGGGEEEEEEEEEBCSSSSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCE
T ss_pred -CCcEEEEcccCHHHcCCceEEEECCCCceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCHHHHHHHHHHhCCe
Confidence 3799999999999999999999999999999999999999987532456789999999999999999999999999874
Q ss_pred ----ceEEEeCCc------eecccCCEEEEEecCCcCccccccccCceEeCC
Q 018462 309 ----GIVSMQCKT------VVFEYGNMIWEFLISGVQPETVCSDIGLCVYNG 350 (355)
Q Consensus 309 ----~~~~v~C~~------i~~~fg~~~~~~~~~~~~~~~~~~~~~~C~~~~ 350 (355)
+.|.++|+. +.|.||+.+|+||++++.-. .. +.|+++.
T Consensus 241 ~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~---~~-g~C~~~~ 288 (329)
T 1htr_B 241 EDEYGQFLVNCNSIQNLPSLTFIINGVEFPLPPSSYILS---NN-GYCTVGV 288 (329)
T ss_dssp ECTTSCEEECGGGGGGSCCEEEEETTEEEEECHHHHEEE---CS-SCEEESE
T ss_pred ecCCCeEEEeCCCcccCCcEEEEECCEEEEECHHHhccc---CC-CEEEEEE
Confidence 779999983 78899999999999998322 22 5898654
No 12
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=6.4e-55 Score=406.65 Aligned_cols=273 Identities=36% Similarity=0.661 Sum_probs=246.7
Q ss_pred eEeceecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCCCcccCCCCcccCCCCcceeecCceEEEEeCCccEE
Q 018462 69 VVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQIS 148 (355)
Q Consensus 69 ~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~~ 148 (355)
.+||.|+.+.+|+++|+||||||++.|+|||||+++||+|..|. +..|..++.|+|++|+||+..++.|.+.|++|++.
T Consensus 3 ~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~ 81 (324)
T 1am5_A 3 TEQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCS-AQACSNHNKFKPRQSSTYVETGKTVDLTYGTGGMR 81 (324)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEE
T ss_pred eeeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-cccccCCCcCCCccCCCeEeCCcEEEEEECCCCeE
Confidence 47999999999999999999999999999999999999999996 45799899999999999999999999999999999
Q ss_pred EeEEEeeeeeeeeeecCcEEEEEEecCCccccccccceeeccccccccCCCCCchhHHHHHcCCCCccEEEEEecCCCCC
Q 018462 149 GFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPNS 228 (355)
Q Consensus 149 G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~ 228 (355)
|.+++|+|++++..++++.||++....+..+....++||||||++..+.....|++++|++||+|++++||+||++...
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~- 160 (324)
T 1am5_A 82 GILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGA- 160 (324)
T ss_dssp EEEEEEEEESSSSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTC-
T ss_pred EEEEECceeECCcEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHHhcCCCCCCEEEEEecCCCC-
Confidence 9999999999999999999999998765455566789999999998887777889999999999999999999998632
Q ss_pred CcccEEEECCcCCCCcccceEEEeccCcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHHHHHHHHhCCC
Q 018462 229 EVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAE 308 (355)
Q Consensus 229 ~~~G~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~ 308 (355)
..|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|+++++.+. +.+ ..++|||||+++++|++++++|.+++++.
T Consensus 161 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 237 (324)
T 1am5_A 161 -NGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQTAA-CEG-CQAIVDTGTSKIVAPVSALANIMKDIGAS 237 (324)
T ss_dssp -SCEEEEESSCCGGGBCSCCEEEEEEEETTEEEEECEEEETTEECC-CCC-EEEEECTTCSSEEECTTTHHHHHHHHTCE
T ss_pred -CCcEEEECccCHHHcCCceEEEecCCCcEEEEEEeEEEECCceee-ccC-ceEEEecCCccEECCHHHHHHHHHHhCCc
Confidence 389999999999999999999999988999999999999998753 333 89999999999999999999999999873
Q ss_pred ---ceEEEeCCc------eecccCCEEEEEecCCcCccccccccCceEeCC
Q 018462 309 ---GIVSMQCKT------VVFEYGNMIWEFLISGVQPETVCSDIGLCVYNG 350 (355)
Q Consensus 309 ---~~~~v~C~~------i~~~fg~~~~~~~~~~~~~~~~~~~~~~C~~~~ 350 (355)
|.|.++|+. +.|.||+..|+||++++.-. . .+.|+++.
T Consensus 238 ~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~---~-~~~C~~~~ 284 (324)
T 1am5_A 238 ENQGEMMGNCASVQSLPDITFTINGVKQPLPPSAYIEG---D-QAFCTSGL 284 (324)
T ss_dssp ECCCCEECCTTSSSSSCCEEEEETTEEEEECHHHHEEE---S-SSCEEECE
T ss_pred ccCCcEEEeCCCcccCCcEEEEECCEEEEECHHHhccc---C-CCeEEEEE
Confidence 779999983 78999999999999998322 2 67898654
No 13
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=2.7e-54 Score=416.42 Aligned_cols=276 Identities=30% Similarity=0.564 Sum_probs=246.4
Q ss_pred CceeEeceecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCCCcccCCCCcccCCCCcceeecCceEEEEeCCc
Q 018462 66 KADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSG 145 (355)
Q Consensus 66 ~~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g 145 (355)
....+||.|+.+.+|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|
T Consensus 126 ~~~~~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~-~~~C~~~~~ydps~SsT~~~~~~~~~i~YgdG 204 (453)
T 2bju_A 126 SNDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCT-TAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSG 204 (453)
T ss_dssp CSEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-STTGGGSCCBCGGGCTTCEEEEEEEEEECSSS
T ss_pred CCCceeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCC-ccccCCCCcCCCccCCceeECCcEEEEEcCCC
Confidence 34679999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred cEEEeEEEeeeeeeeeeecCcEEEEEEecC--CccccccccceeeccccccccCCCCCchhHHHHHcCCCCccEEEEEec
Q 018462 146 QISGFFSQDNVKIGDMIIKDQEFVEVTKEG--LLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLN 223 (355)
Q Consensus 146 ~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~--~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~ 223 (355)
+++|.+++|+|++|+..++ +.||++.... +..+....++||||||++..+.....|++++|++||+|++++||+||+
T Consensus 205 s~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~ 283 (453)
T 2bju_A 205 TVSGFFSKDLVTVGNLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLP 283 (453)
T ss_dssp EEEEEEEEEEEEETTEEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECC
T ss_pred CeEEEEEEEEEEEeCcEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeC
Confidence 9999999999999999999 9999999876 444555678999999999988877889999999999999999999999
Q ss_pred CCCCCCcccEEEECCcCCCCcccceEEEeccCcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHHHHHHH
Q 018462 224 QDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINH 303 (355)
Q Consensus 224 ~~~~~~~~G~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~ 303 (355)
+.+ ...|+|+|||+|+++|.|+++|+|+.+.++|.|.++ |.|++ .+ + .++.++|||||+++++|.+++++|.+
T Consensus 284 ~~~--~~~G~l~fGg~D~~~y~G~l~~~pv~~~~~w~V~l~-I~Vgg-~~--~-~~~~aIiDSGTsl~~lP~~~~~~l~~ 356 (453)
T 2bju_A 284 VHD--KHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLD-AHVGN-IM--L-EKANCIVDSGTSAITVPTDFLNKMLQ 356 (453)
T ss_dssp BTT--TBCEEEEESSCCGGGEEEEEEEEEEEEETTEEEEEE-EEETT-EE--E-EEEEEEECTTCCSEEECHHHHHHHTT
T ss_pred CCC--CCCeEEEECCCCHHHcCCceEEEecCCCceEEEEEE-EEECc-EE--e-ccccEEEcCCCCeEecCHHHHHHHHH
Confidence 862 348999999999999999999999999999999999 99999 33 3 56789999999999999999999999
Q ss_pred HhCCC----c-eEEEeCCc-----eecccCCEEEEEecCCcCccccccccCceEeCC
Q 018462 304 AIGAE----G-IVSMQCKT-----VVFEYGNMIWEFLISGVQPETVCSDIGLCVYNG 350 (355)
Q Consensus 304 ~i~~~----~-~~~v~C~~-----i~~~fg~~~~~~~~~~~~~~~~~~~~~~C~~~~ 350 (355)
++++. | .|.+||+. +.|.|||..|+||++++.-.....+.+.|+++.
T Consensus 357 ~i~~~~~~~g~~~~v~C~~~~~P~itf~fgg~~~~l~~~~yi~~~~~~g~~~C~~~~ 413 (453)
T 2bju_A 357 NLDVIKVPFLPFYVTLCNNSKLPTFEFTSENGKYTLEPEYYLQHIEDVGPGLCMLNI 413 (453)
T ss_dssp TSSCEECTTSSCEEEETTCTTCCCEEEECSSCEEEECHHHHEEECTTTSTTEEEECE
T ss_pred HhCCcccCCCceEEEecCCCCCCcEEEEECCEEEEECHHHhEeecccCCCceEEEEE
Confidence 99874 6 79999984 889999999999999983222112456898653
No 14
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=1.7e-53 Score=379.88 Aligned_cols=237 Identities=57% Similarity=1.034 Sum_probs=217.3
Q ss_pred eeEeceecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCCCcccCCCCcccCCCCcceeecCceEEEEeCCccE
Q 018462 68 DVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQI 147 (355)
Q Consensus 68 ~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~ 147 (355)
..+||.|+.+.+|+++|+||||||+|.|+|||||+++||+|..|..+..|..++.|+|++|+||+..++.|.+.|++|++
T Consensus 3 ~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~ 82 (239)
T 1b5f_A 3 AVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTYKENGTFGAIIYGTGSI 82 (239)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEE
T ss_pred ceeeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCCCCCCCccCCCeeeCCcEEEEEECCCcE
Confidence 45899999999999999999999999999999999999999999756689999999999999999999999999999999
Q ss_pred EEeEEEeeeeeeeeeecCcEEEEEEecCCccccccccceeeccccccccCCCCCchhHHHHHcCCCCccEEEEEecCCCC
Q 018462 148 SGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPN 227 (355)
Q Consensus 148 ~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~ 227 (355)
+|.+++|+|+|++..++++.||++....+..|....++||||||++..+ .|++++|++||+|++++||+||.+..+
T Consensus 83 ~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s----~p~~~~l~~qg~i~~~~FS~~l~~~~~ 158 (239)
T 1b5f_A 83 TGFFSQDSVTIGDLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTIS----VPVWYNMLNQGLVKERRFSFWLNRNVD 158 (239)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSS----CCHHHHHHHTTCCSSSEEEEEECCSCS
T ss_pred EEEEEEEEEEECCcEEccEEEEEEEeccCccccccCcceEEecCccccc----cHHHHHHHHCCCCCCCEEEEEEeCCCC
Confidence 9999999999999999999999998766544556678999999998776 678999999999999999999998643
Q ss_pred CCcccEEEECCcCCCCcccceEEEeccCcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHHHHHHHHhCC
Q 018462 228 SEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGA 307 (355)
Q Consensus 228 ~~~~G~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~ 307 (355)
....|+|+|||+|+++|.|+++|+|+.++++|.|.+++|.|+++.+.++..++.++|||||+++++|++++++|.+++++
T Consensus 159 ~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 159 EEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp SSCCEEEEETSCCGGGEEEEEEEEEEEEETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred CCCCeEEEECCcChhhccCceEEEEcccCCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 34589999999999999999999999989999999999999998876556678999999999999999999999999987
Q ss_pred C
Q 018462 308 E 308 (355)
Q Consensus 308 ~ 308 (355)
+
T Consensus 239 ~ 239 (239)
T 1b5f_A 239 N 239 (239)
T ss_dssp C
T ss_pred C
Confidence 4
No 15
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=4.6e-53 Score=399.84 Aligned_cols=280 Identities=25% Similarity=0.452 Sum_probs=245.7
Q ss_pred CceeEeceecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCCCcccCCCCcccCCCCcceeecCceEEEEeCCc
Q 018462 66 KADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSG 145 (355)
Q Consensus 66 ~~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g 145 (355)
....+||.|+.+.+|+++|+||||||++.|+|||||+++||+|..|.....|..++.|+|++|+||+..++.|.+.|++|
T Consensus 6 ~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 85 (361)
T 1mpp_A 6 SVDTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETDYNLNITYGTG 85 (361)
T ss_dssp CEEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEEEEEEEECSSC
T ss_pred ccceEEeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCCCcCCCccCCceEecCCeEEEEECCc
Confidence 35568999999999999999999999999999999999999999995334799899999999999999999999999999
Q ss_pred cEEEeEEEeeeeeeeeeecCcEEEEEEecCC-----ccccccccceeeccccccccCCC------CCchhHHHHHcCCCC
Q 018462 146 QISGFFSQDNVKIGDMIIKDQEFVEVTKEGL-----LPFLALQFDGILGLGFRDIAAGN------ATPLWYNMVRQGHIS 214 (355)
Q Consensus 146 ~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~-----~~~~~~~~~GilGLg~~~~s~~~------~~~~~~~l~~~g~i~ 214 (355)
++.|.+++|+|+|++..++++.||++....+ ..+....++||||||++..+... ..+++++|++||+|.
T Consensus 86 s~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~ 165 (361)
T 1mpp_A 86 GANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLIS 165 (361)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSS
T ss_pred eEEEEEEEEEEEECCEEEeceEEEEEEeccCccccccccccCCCCCEEEeCCcccccccccccccCCCHHHHHHHcCCCC
Confidence 9999999999999999999999999988754 34555678999999998876533 778999999999999
Q ss_pred ccEEEEEecCCCCCCcccEEEECCcCCCCcccceEEEeccCcc----eeEEEEeeEEEcCeEeEeecCCeeEE-EccCcc
Q 018462 215 QKIFSLWLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKG----YWQIKVGDILIENSSTGFCEDGCTAI-LDSGTS 289 (355)
Q Consensus 215 ~~~fs~~l~~~~~~~~~G~l~~Gg~d~~~~~g~l~~~p~~~~~----~w~v~~~~i~vg~~~~~~~~~~~~ai-iDTGt~ 289 (355)
+++||+||.+. ...|+|+|||+|+++|.|+++|+|+.+.. +|.|.+++|.|+++.+. +..+..++ |||||+
T Consensus 166 ~~~FS~~l~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~-~~~~~~ai~iDSGTt 241 (361)
T 1mpp_A 166 SPVFSVYMNTN---DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAV-SFDGAQAFTIDTGTN 241 (361)
T ss_dssp SSEEEEECCCS---SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEE-EEEEEEEEEEETTCC
T ss_pred CcEEEEEecCC---CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeeec-cCCCCEEEEECCCCC
Confidence 99999999985 23899999999999999999999998766 99999999999998764 34557899 999999
Q ss_pred CcccCHHHHHHHHHHhCCC-----ceEEEeCCc-------eeccc--C-----CEEEEEecCCcCccccccccCceEeCC
Q 018462 290 VLAGPTTVVAQINHAIGAE-----GIVSMQCKT-------VVFEY--G-----NMIWEFLISGVQPETVCSDIGLCVYNG 350 (355)
Q Consensus 290 ~i~lP~~~~~~i~~~i~~~-----~~~~v~C~~-------i~~~f--g-----~~~~~~~~~~~~~~~~~~~~~~C~~~~ 350 (355)
++++|.+++++|.+++++. +.|.++|+. +.|.| | +..|+||++++.-... .+...|+++.
T Consensus 242 ~~~lP~~~~~~l~~~~~~~~~~~~g~~~~~C~~~~~~~p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~-~~~~~C~~~i 320 (361)
T 1mpp_A 242 FFIAPSSFAEKVVKAALPDATESQQGYTVPCSKYQDSKTTFSLVLQKSGSSSDTIDVSVPISKMLLPVD-KSGETCMFIV 320 (361)
T ss_dssp SEEEEHHHHHHHHHHHCTTCEEETTEEEEEHHHHTTCCCEEEEEEECTTCSSCEEEEEEEGGGGEEECS-SSSCEEEESE
T ss_pred ceeCCHHHHHHHHHHhCCcccCCCCcEEEECCCcccCCCcEEEEEEcCCcCCCCeEEEECHHHhEEecC-CCCCeeEEEE
Confidence 9999999999999999884 779999963 67899 8 8999999999832211 1356898754
No 16
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=3.9e-53 Score=395.37 Aligned_cols=272 Identities=25% Similarity=0.413 Sum_probs=243.5
Q ss_pred ceeEeceecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCCCccc--CCCCcccCCCCcceeecCceEEEEeCC
Q 018462 67 ADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISC--YLHSRYRARLSRTYTKIGVPCKIHYGS 144 (355)
Q Consensus 67 ~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~~~~C--~~~~~y~~~~Sst~~~~~~~~~~~Y~~ 144 (355)
...+||.|+.+..|+++|+|| ||+|.|+|||||+++||++..|. ...| ..++.|+|++| ||+..++.|.+.|++
T Consensus 6 ~~~~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~~~y~~~~S-T~~~~~~~~~i~Yg~ 81 (330)
T 1yg9_A 6 PLYKLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECV-GGACVCPNLQKYEKLKP-KYISDGNVQVKFFDT 81 (330)
T ss_dssp CSCSCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCC-SGGGGSTTCCCCCCSSC-EEEEEEEEEEEETTT
T ss_pred eeEeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-CccCcccccCccCCCCC-ceEECCCEEEEEECC
Confidence 344789999999999999999 89999999999999999999996 4679 88999999999 999999999999999
Q ss_pred ccEEEeEEEeeeeeeeeeecCcEEEEEEecCCccccccccceeecccccccc-CCCCCchhHHHHHcCCCCccEEEEEec
Q 018462 145 GQISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIA-AGNATPLWYNMVRQGHISQKIFSLWLN 223 (355)
Q Consensus 145 g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s-~~~~~~~~~~l~~~g~i~~~~fs~~l~ 223 (355)
|++.|.+++|+|+|++..++++.||++... +..|....++||||||++..+ .....|++++|++||+| +++||+||+
T Consensus 82 Gs~~G~~~~Dtv~ig~~~~~~~~fg~~~~~-~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i-~~~FS~~l~ 159 (330)
T 1yg9_A 82 GSAVGRGIEDSLTISQLTTSQQDIVLADEL-SQEVCILSADVVVGIAAPGCPNALKGKTVLENFVEENLI-APVFSIHHA 159 (330)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEEEEEEE-CTHHHHTTCSEEEECSCTTSCCTTSCCCHHHHHHHTTSS-CSEEEEEEE
T ss_pred ceEEEEEEEEEEEECCEEEcCeEEEEEEEc-ccccccccCceEEEcCcchhccccCCCCHHHHHHhcCCC-CceEEEEEc
Confidence 999999999999999999999999999887 434555678999999999887 66678899999999999 999999999
Q ss_pred CCCCCCcccEEEECCcCCCCcccceEEEeccCcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHHHHHHH
Q 018462 224 QDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINH 303 (355)
Q Consensus 224 ~~~~~~~~G~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~ 303 (355)
+..+....|+|+|||+|+++|+|+++|+|+.+.++|.|.+++|.|+++.+. ..+..++|||||+++++|++++++|.+
T Consensus 160 ~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~--~~~~~aiiDSGTs~~~lP~~~~~~l~~ 237 (330)
T 1yg9_A 160 RFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWKFRLDGVKIGDTTVA--PAGTQAIIDTSKAIIVGPKAYVNPINE 237 (330)
T ss_dssp ECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCTTSCCEECSEEEETTEEEE--CTTCEEEECTTCSSEEEEHHHHHHHHH
T ss_pred CCCCCCCCCEEEECCcCHHHccCceEEEECCCCCEEEEEeCeEEECCEEEc--CCCcEEEEecCCccccCCHHHHHHHHH
Confidence 864333489999999999999999999999999999999999999998763 567899999999999999999999999
Q ss_pred HhCCC----c--eE-EEeCCc------eecccCCEEEEEecCCcCccccccccCceEeCC
Q 018462 304 AIGAE----G--IV-SMQCKT------VVFEYGNMIWEFLISGVQPETVCSDIGLCVYNG 350 (355)
Q Consensus 304 ~i~~~----~--~~-~v~C~~------i~~~fg~~~~~~~~~~~~~~~~~~~~~~C~~~~ 350 (355)
++++. | .| .+||+. +.|.||+.+|+||++++.-. . .+.|++..
T Consensus 238 ~~~~~~~~~g~~~~~~~~C~~~~~~p~i~f~fgg~~~~l~~~~y~~~---~-~~~C~~~i 293 (330)
T 1yg9_A 238 AIGCVVEKTTTRRICKLDCSKIPSLPDVTFVINGRNFNISSQYYIQQ---N-GNLCYSGF 293 (330)
T ss_dssp HHTCEEEECSSCEEEEECGGGGGGSCCEEEEETTEEEEECHHHHEEE---E-TTEEEESE
T ss_pred HhCCcccCCCceEEEEEECCCccccCcEEEEECCEEEEECHHHhccc---C-CCcEEEEE
Confidence 99884 6 78 999984 78899999999999998322 2 67898753
No 17
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=1.2e-51 Score=384.55 Aligned_cols=266 Identities=35% Similarity=0.634 Sum_probs=233.3
Q ss_pred ecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCCCcccCCCCcccCCCCcceeecCceEEEEeCCcc-EEEeEE
Q 018462 74 NYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQ-ISGFFS 152 (355)
Q Consensus 74 ~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~-~~G~~~ 152 (355)
+..+.+|+++|+||||||+|.|+|||||+++||+|..|..+ |..++.|+|++|+||+..++.|.+.|++|+ +.|.++
T Consensus 11 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c--~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~~G~~~ 88 (325)
T 2apr_A 11 YGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC--GSGQTKYDPNQSSTYQADGRTWSISYGDGSSASGILA 88 (325)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC--CTTSCCBCGGGCTTCEEEEEEEEEECTTSCEEEEEEE
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH--hcCCCCCCcccCCCeeeCCCEEEEEECCCCCEEEEEE
Confidence 45688999999999999999999999999999999999855 788899999999999999999999999998 899999
Q ss_pred EeeeeeeeeeecCcEEEEEEecCCccccccccceeeccccccccC-CCCCchhHHHHHcCCCCccEEEEEecCCCCCCcc
Q 018462 153 QDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA-GNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVG 231 (355)
Q Consensus 153 ~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~-~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~~ 231 (355)
+|+|+|++..++++.||++..... .|....++||||||++..+. ....+++++|++||+|++++||+||.+... ...
T Consensus 89 ~D~v~~g~~~v~~~~fg~~~~~~~-~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~-~~~ 166 (325)
T 2apr_A 89 KDNVNLGGLLIKGQTIELAKREAA-SFASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKAKN-GGG 166 (325)
T ss_dssp EEEEEETTEEEEEEEEEEEEEECH-HHHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTSCSSSEEEEEECCGGG-TCC
T ss_pred EEEEEECCEEECcEEEEEEeccCc-ccccCCCceEEEeCCcccccccCCCCHHHHHHhcCCCCCceEEEEecCCCC-CCC
Confidence 999999999999999999987654 34445589999999998764 356789999999999999999999976421 238
Q ss_pred cEEEECCcCCCCcccceEEEecc-CcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHHHHHHHHhCCC--
Q 018462 232 GEIIFGGFDWRHFRGSHIYVPIT-EKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAE-- 308 (355)
Q Consensus 232 G~l~~Gg~d~~~~~g~l~~~p~~-~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~-- 308 (355)
|+|+|||+|+++|.|+++|+|+. ..++|.|.+++|+|++ .+ +...+.++|||||+++++|++++++|.+++.+.
T Consensus 167 G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~-~~--~~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~ 243 (325)
T 2apr_A 167 GEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGT-ST--VASSFDGILDTGTTLLILPNNIAASVARAYGASDN 243 (325)
T ss_dssp EEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETT-EE--EECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEEC
T ss_pred CEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECC-Ee--cCCCceEEEecCCccEECCHHHHHHHHHHHhcccC
Confidence 99999999999999999999996 4789999999999999 33 456789999999999999999999999998664
Q ss_pred --ceEEEeCCc-----eecccCCEEEEEecCCcCccccccccCceEeC
Q 018462 309 --GIVSMQCKT-----VVFEYGNMIWEFLISGVQPETVCSDIGLCVYN 349 (355)
Q Consensus 309 --~~~~v~C~~-----i~~~fg~~~~~~~~~~~~~~~~~~~~~~C~~~ 349 (355)
+.|.+||+. +.|.|++.+|+||++++.-. ...+.|++.
T Consensus 244 ~~g~~~~~C~~~~~p~i~f~f~g~~~~ip~~~~~~~---~~~~~C~~~ 288 (325)
T 2apr_A 244 GDGTYTISCDTSAFKPLVFSINGASFQVSPDSLVFE---EFQGQCIAG 288 (325)
T ss_dssp SSSCEEECSCGGGCCCEEEEETTEEEEECGGGGEEE---EETTEEEES
T ss_pred CCCeEEEECCCCCCCcEEEEECCEEEEECHHHEEEc---CCCCeEEEE
Confidence 679999983 78899888999999998322 226789875
No 18
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=2.3e-51 Score=385.01 Aligned_cols=267 Identities=29% Similarity=0.497 Sum_probs=235.9
Q ss_pred eeEeceecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCC--CCCCcccCCCCcccCCCCcceeecCceEEEEeCCc
Q 018462 68 DVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSK--CLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSG 145 (355)
Q Consensus 68 ~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~--C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g 145 (355)
..+||.+. +..|+++|+||||||++.|+|||||+++||++.. |..+..|..++.|+|++|+||+..++.|.+.|++|
T Consensus 3 i~~~l~~~-~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g 81 (339)
T 3fv3_A 3 ISLSLINE-GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLGAAFTIRYGDG 81 (339)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTTCCBCGGGCTTCEEEEEEEEEECTTS
T ss_pred eeeEEEcC-CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCCCcCCCccCcceeeCCceEEEEECCC
Confidence 34788775 5799999999999999999999999999999775 76556899999999999999999999999999999
Q ss_pred c-EEEeEEEeeeeeeeeeecCcEEEEEEecCCccccccccceeeccccccccC----------CCCCchhHHHHHcCCCC
Q 018462 146 Q-ISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA----------GNATPLWYNMVRQGHIS 214 (355)
Q Consensus 146 ~-~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~----------~~~~~~~~~l~~~g~i~ 214 (355)
+ +.|.+++|+|+|++..++++.||++..... .+||||||++..+. ....+++++|++||+|+
T Consensus 82 s~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~-------~~GilGLg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~ 154 (339)
T 3fv3_A 82 STSQGTWGKDTVTINGVSITGQQIADVTQTSV-------DQGILGIGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIR 154 (339)
T ss_dssp CEEEEEEEEEEEEETTEEEEEEEEEEEEEESS-------SSCEEECSCGGGCCCBCTTSCBCSCCCCCHHHHHHHTTSCS
T ss_pred ceEEEEEEEEEEEECCEEECceEEEEEEecCC-------CceeEEecCccccccccccccccCccCCcHHHHHHHCCCCC
Confidence 5 899999999999999999999999987653 49999999988753 23456999999999999
Q ss_pred ccEEEEEecCCCCCCcccEEEECCcCCCCcccceEEEeccCcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccC
Q 018462 215 QKIFSLWLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGP 294 (355)
Q Consensus 215 ~~~fs~~l~~~~~~~~~G~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP 294 (355)
+++||+||++.. ...|+|+|||+|+++|.|+++|+|+..+.+|.|.+++|.++++.+.. ...++|||||+++++|
T Consensus 155 ~~~fsl~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~---~~~~iiDSGtt~~~lP 229 (339)
T 3fv3_A 155 TNAYSLYLNSPS--AETGTIIFGGVDNAKYSGKLVAEQVTSSQALTISLASVNLKGSSFSF---GDGALLDSGTTLTYFP 229 (339)
T ss_dssp SSEEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEEBCCSSSCEEEEEEEEESSCEEEE---EEEEEECTTBSSEEEC
T ss_pred CceEEEEECCCC--CCCeEEEEeeechHHeecceEEEecccCccEEEEEEEEEECCEeecC---CccEEEeCCCCCEecC
Confidence 999999998763 23899999999999999999999999989999999999999988753 3689999999999999
Q ss_pred HHHHHHHHHHhCCC--------ceEEEeCCc-----eecccC-CEEEEEecCCcCccccccccCceEeCC
Q 018462 295 TTVVAQINHAIGAE--------GIVSMQCKT-----VVFEYG-NMIWEFLISGVQPETVCSDIGLCVYNG 350 (355)
Q Consensus 295 ~~~~~~i~~~i~~~--------~~~~v~C~~-----i~~~fg-~~~~~~~~~~~~~~~~~~~~~~C~~~~ 350 (355)
++++++|.+++++. +.|.+||+. +.|.|+ +.+|+||++++ ....+.+.|+++.
T Consensus 230 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~p~i~f~f~~g~~~~v~~~~~---~~~~~~~~C~~~i 296 (339)
T 3fv3_A 230 SDFAAQLADKAGARLVQVARDQYLYFIDCNTDTSGTTVFNFGNGAKITVPNTEY---VYQNGDGTCLWGI 296 (339)
T ss_dssp HHHHHHHHHHHTCEEEEEETTEEEEEECTTCCCCSEEEEEETTSCEEEEEGGGG---EEECSSSCEEESE
T ss_pred HHHHHHHHHHcCCEEccccccCceEEEecCCCCCCcEEEEECCCCEEEECHHHh---eeeCCCCeEEEEE
Confidence 99999999999863 668899985 788995 89999999999 3333668898764
No 19
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=8.9e-52 Score=386.11 Aligned_cols=267 Identities=24% Similarity=0.374 Sum_probs=231.3
Q ss_pred ecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCCCcccCCCCcccCCCCcceee-cCceEEEEeCCcc-EEEeE
Q 018462 74 NYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTK-IGVPCKIHYGSGQ-ISGFF 151 (355)
Q Consensus 74 ~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~-~~~~~~~~Y~~g~-~~G~~ 151 (355)
.+.+..|+++|+||||||+|.|+|||||+++||+|..|. ...|..++.|+|++|+||+. .++.|.+.|++|+ ++|.+
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~~~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~ 89 (329)
T 3c9x_A 11 DSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETP-KSSATGHAIYTPSKSSTSKKVSGASWSISYGDGSSSSGDV 89 (329)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCGGGCTTCEECTTCBEEEECTTSCEEEEEE
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCC-ccccCCCCcCCcccCcCceEcCCCeEEEEeCCCCcEEEEE
Confidence 456789999999999999999999999999999999997 33567789999999999999 6899999999999 89999
Q ss_pred EEeeeeeeeeeecCcEEEEEEecCCccccccccceeeccccccccC---CCCCchhHHHHHcCCCCccEEEEEecCCCCC
Q 018462 152 SQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA---GNATPLWYNMVRQGHISQKIFSLWLNQDPNS 228 (355)
Q Consensus 152 ~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~---~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~ 228 (355)
++|+|+|++..++++.||++....+..+....++||||||++..+. ....+++++|+++ |.+++||+||.+.
T Consensus 90 ~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~l~~~--- 164 (329)
T 3c9x_A 90 YTDKVTIGGFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAASS--LAEPLFTADLRHG--- 164 (329)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHTT--SSSSEEEEECCSS---
T ss_pred EEEEEEECCEEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHHHh--cCCCEEEEEecCC---
Confidence 9999999999999999999987654322235679999999988765 2457899999987 8899999999874
Q ss_pred CcccEEEECCcCCCCcccceEEEecc-CcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHHHHHHHHh-C
Q 018462 229 EVGGEIIFGGFDWRHFRGSHIYVPIT-EKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAI-G 306 (355)
Q Consensus 229 ~~~G~l~~Gg~d~~~~~g~l~~~p~~-~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i-~ 306 (355)
..|+|+|||+|+++|.|+++|+|+. ..++|.|.+++|.|+++.+ +..++.++|||||+++++|++++++|.+++ +
T Consensus 165 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~ 241 (329)
T 3c9x_A 165 -QNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKL--NRNSIDGIADTGTTLLLLDDNVVDAYYANVQS 241 (329)
T ss_dssp -SCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCC--CSCCEEEEECTTCCSEEECHHHHHHHHTTCTT
T ss_pred -CCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEec--cCCCceEEEECCCCcEeCCHHHHHHHHHhCCC
Confidence 2899999999999999999999997 5789999999999999865 456789999999999999999999999999 4
Q ss_pred CC-----ceEEEeCC----ceecccCCEEEEEecCCcCccccccccCceEeC
Q 018462 307 AE-----GIVSMQCK----TVVFEYGNMIWEFLISGVQPETVCSDIGLCVYN 349 (355)
Q Consensus 307 ~~-----~~~~v~C~----~i~~~fg~~~~~~~~~~~~~~~~~~~~~~C~~~ 349 (355)
+. +.|.+||+ .+.|.|++.+|+||++++.-.....+.+.|++.
T Consensus 242 a~~~~~~~~~~~~C~~~~P~i~f~f~g~~~~ip~~~~~~~~~~~~~~~C~~~ 293 (329)
T 3c9x_A 242 AQYDNQQEGVVFDCDEDLPSFSFGVGSSTITIPGDLLNLTPLEEGSSTCFGG 293 (329)
T ss_dssp CEEETTTTEEEEETTCCCCCEEEEETTEEEEECGGGGEEEESSTTCSEEEES
T ss_pred cEEcCCCCEEEEECCCCCCcEEEEECCEEEEECHHHeeeeccCCCCCeEEEE
Confidence 42 78999997 478999999999999998332222235789875
No 20
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1e-51 Score=385.75 Aligned_cols=265 Identities=25% Similarity=0.398 Sum_probs=228.4
Q ss_pred cCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCCCcccCCCCcccCCCCcceee-cCceEEEEeCCcc-EEEeEE
Q 018462 75 YLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTK-IGVPCKIHYGSGQ-ISGFFS 152 (355)
Q Consensus 75 ~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~-~~~~~~~~Y~~g~-~~G~~~ 152 (355)
..+.+|+++|+||||||+|.|+|||||+++||+|..|. ...| .++.|+|++|+||+. .++.|.+.|++|+ ++|.++
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~-~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~~ 89 (329)
T 1oew_A 12 SLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETT-ASEV-XQTIYTPSKSTTAKLLSGATWSISYGDGSSSSGDVY 89 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-GGGC--CCCBCGGGCTTCEEEEEEEEEEECTTSCEEEEEEE
T ss_pred CCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCC-cccc-ccCccCCccCccceecCCCeEEEEeCCCCcEEEEEE
Confidence 35789999999999999999999999999999999997 3356 788999999999999 6889999999999 899999
Q ss_pred EeeeeeeeeeecCcEEEEEEecCCccccccccceeeccccccccC---CCCCchhHHHHHcCCCCccEEEEEecCCCCCC
Q 018462 153 QDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA---GNATPLWYNMVRQGHISQKIFSLWLNQDPNSE 229 (355)
Q Consensus 153 ~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~---~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~ 229 (355)
+|+|+|++..++++.||++....+..+....++||||||++..+. ....+++++|++| |.+++||+||.+.
T Consensus 90 ~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~---- 163 (329)
T 1oew_A 90 TDTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKAS--LDSPVFTADLGYH---- 163 (329)
T ss_dssp EEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTTT--SSSSEEEEECCSS----
T ss_pred EEEEEECCEEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHHHh--ccCcEEEEEccCC----
Confidence 999999999999999999988654322235679999999988765 2467899999987 8899999999874
Q ss_pred cccEEEECCcCCCCcccceEEEecc-CcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHHHHHHHHh-CC
Q 018462 230 VGGEIIFGGFDWRHFRGSHIYVPIT-EKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAI-GA 307 (355)
Q Consensus 230 ~~G~l~~Gg~d~~~~~g~l~~~p~~-~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i-~~ 307 (355)
..|+|+|||+|+++|.|+++|+|+. ..++|.|.+++|+|+++.+ +..++.++|||||+++++|++++++|++++ ++
T Consensus 164 ~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a 241 (329)
T 1oew_A 164 APGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTF--KSTSIDGIADTGTTLLYLPATVVSAYWAQVSGA 241 (329)
T ss_dssp SCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCC--EEEEEEEEECTTCCSEEECHHHHHHHHTTSTTC
T ss_pred CCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeec--cCCCceEEEeCCCCCEECCHHHHHHHHHhCCCc
Confidence 2899999999999999999999997 5789999999999999865 345678999999999999999999999999 44
Q ss_pred C-----ceEEEeCC----ceecccCCEEEEEecCCcCccccccccCceEeC
Q 018462 308 E-----GIVSMQCK----TVVFEYGNMIWEFLISGVQPETVCSDIGLCVYN 349 (355)
Q Consensus 308 ~-----~~~~v~C~----~i~~~fg~~~~~~~~~~~~~~~~~~~~~~C~~~ 349 (355)
. +.|.+||+ .+.|.||+.+|+||++++.-.....+.+.|++.
T Consensus 242 ~~~~~~g~~~~~C~~~~P~i~f~fgg~~~~ip~~~~~~~~~~~~~~~C~~~ 292 (329)
T 1oew_A 242 KSSSSVGGYVFPCSATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGG 292 (329)
T ss_dssp EEETTTTEEEEETTCCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEES
T ss_pred EEcCCCCEEEEECCCCCCcEEEEECCEEEEECHHHeeeeecCCCCCeEEEE
Confidence 2 78999997 478899999999999998332222345789875
No 21
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=4.4e-51 Score=382.27 Aligned_cols=267 Identities=28% Similarity=0.469 Sum_probs=233.1
Q ss_pred eeEeceecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCC--CCCCC------cccCCCCcccCCCCcceeecCceEE
Q 018462 68 DVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSS--KCLFS------ISCYLHSRYRARLSRTYTKIGVPCK 139 (355)
Q Consensus 68 ~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~--~C~~~------~~C~~~~~y~~~~Sst~~~~~~~~~ 139 (355)
..+||.|. +.+|+++|+||||||+|.|+|||||+++||++. .|..+ ..|..++.|+|++|+||+..++.|.
T Consensus 3 ~~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (334)
T 1j71_A 3 VPTTLINE-GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLNQDFS 81 (334)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEEEEEE
T ss_pred eeEEEecC-CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCCCceE
Confidence 34788886 789999999999999999999999999999976 67632 3798899999999999999999999
Q ss_pred EEeCCcc-EEEeEEEeeeeeeeeeecCcEEEEEEecCCccccccccceeeccccccccCC--CCCchhHHHHHcCCCCcc
Q 018462 140 IHYGSGQ-ISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAG--NATPLWYNMVRQGHISQK 216 (355)
Q Consensus 140 ~~Y~~g~-~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~--~~~~~~~~l~~~g~i~~~ 216 (355)
+.|++|+ +.|.+++|+|+|++..++++.||++.... ..+||||||++..+.. ...+++++|++||+|+++
T Consensus 82 i~Yg~Gs~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~ 154 (334)
T 1j71_A 82 IEYGDLTSSQGSFYKDTVGFGGISIKNQQFADVTTTS-------VDQGIMGIGFTADEAGYNLYDNVPVTLKKQGIINKN 154 (334)
T ss_dssp EEBTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGSSTTCCCCCHHHHHHHTTSCSSS
T ss_pred EEECCCCEEEEEEEEEEEEECCEEEccEEEEEEEecC-------CCccEEEEcCCcccCccccCCcHHHHHHHCCCCCcc
Confidence 9999998 68999999999999999999999998753 3599999999887542 345789999999999999
Q ss_pred EEEEEecCCCCCCcccEEEECCcCCCCcccceEEEeccCcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHH
Q 018462 217 IFSLWLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTT 296 (355)
Q Consensus 217 ~fs~~l~~~~~~~~~G~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~ 296 (355)
+||+||++.. ...|+|+|||+|+++|.|+++|+|+.++.+|.|.+++|.++++.+. .+..++|||||+++++|++
T Consensus 155 ~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~---~~~~~iiDSGTt~~~lP~~ 229 (334)
T 1j71_A 155 AYSLYLNSED--ASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVS---TNADVVLDSGTTITYFSQS 229 (334)
T ss_dssp EEEEECCCTT--CSEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEE---EEEEEEECTTCSSEEECHH
T ss_pred EEEEEeCCCC--CCCeEEEEeeechHHccCceEEEEccCCCeEEEEEeEEEECCEecc---CCccEEEeCCCCcEecCHH
Confidence 9999998752 3389999999999999999999999998999999999999998874 2368999999999999999
Q ss_pred HHHHHHHHhCCC-----ceEE-EeCCc---eeccc-CCEEEEEecCCcCccccccccC-ceEeCC
Q 018462 297 VVAQINHAIGAE-----GIVS-MQCKT---VVFEY-GNMIWEFLISGVQPETVCSDIG-LCVYNG 350 (355)
Q Consensus 297 ~~~~i~~~i~~~-----~~~~-v~C~~---i~~~f-g~~~~~~~~~~~~~~~~~~~~~-~C~~~~ 350 (355)
++++|.+++++. +.|. ++|+. +.|.| |+.+|+||++++.-. .+.+ .|++..
T Consensus 230 ~~~~l~~~~~~~~~~~~~~~~~~~C~~~p~i~f~f~~g~~~~i~~~~y~~~---~~~~~~C~~~i 291 (334)
T 1j71_A 230 TADKFARIVGATWDSRNEIYRLPSCDLSGDAVFNFDQGVKITVPLSELILK---DSDSSICYFGI 291 (334)
T ss_dssp HHHHHHHHHTCEEETTTTEEECSSSCCCSEEEEEESTTCEEEEEGGGGEEE---CSSSSCEEESE
T ss_pred HHHHHHHHcCCcccCCCceEEEEcCCCCCceEEEEcCCcEEEECHHHheee---cCCCCeeEEEE
Confidence 999999999874 4788 99984 78899 799999999998322 2223 498753
No 22
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=7.7e-51 Score=381.87 Aligned_cols=270 Identities=31% Similarity=0.489 Sum_probs=234.0
Q ss_pred eeEeceecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCC--CCCC------CcccCCCCcccCCCCcceeecCceEE
Q 018462 68 DVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSS--KCLF------SISCYLHSRYRARLSRTYTKIGVPCK 139 (355)
Q Consensus 68 ~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~--~C~~------~~~C~~~~~y~~~~Sst~~~~~~~~~ 139 (355)
..+||.| .+.+|+++|+||||||+|.|+|||||+++||++. .|.. ...|..++.|+|++|+||+..++.|.
T Consensus 3 v~~~l~~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (342)
T 2qzx_A 3 VAVTLHN-EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLNTRFD 81 (342)
T ss_dssp EEEEEEE-CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEEEEEE
T ss_pred eeEEEec-CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCCCcEE
Confidence 3478887 5789999999999999999999999999999976 6753 24798899999999999999999999
Q ss_pred EEeCCcc-EEEeEEEeeeeeeeeeecCcEEEEEEecCCccccccccceeeccccccccCC--CCCchhHHHHHcCCCCcc
Q 018462 140 IHYGSGQ-ISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAG--NATPLWYNMVRQGHISQK 216 (355)
Q Consensus 140 ~~Y~~g~-~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~--~~~~~~~~l~~~g~i~~~ 216 (355)
+.|++|+ +.|.+++|+|+|++..++++.||++.... ..+||||||++..+.. ...+++++|++||+|+++
T Consensus 82 i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~ 154 (342)
T 2qzx_A 82 IKYGDGSYAKGKLYKDTVGIGGVSVRDQLFANVWSTS-------ARKGILGIGFQSGEATEFDYDNLPISLRNQGIIGKA 154 (342)
T ss_dssp EECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEC-------SSSCEEECSCGGGCSSSSCCCCHHHHHHHTTSSSSS
T ss_pred EEeCCCCeEEEEEEEEEEEECCEEecceEEEEEEecC-------CCcCEEEEccccccCCCccCccHHHHHHHCCCcCcc
Confidence 9999998 68999999999999999999999998753 3599999999887543 245789999999999999
Q ss_pred EEEEEecCCCCCCcccEEEECCcCCCCcccceEEEeccCcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHH
Q 018462 217 IFSLWLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTT 296 (355)
Q Consensus 217 ~fs~~l~~~~~~~~~G~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~ 296 (355)
+||+||++.. ...|+|+|||+|+++|.|+++|+|+.++.+|.|.+++|.++++.+. .+..++|||||+++++|++
T Consensus 155 ~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~---~~~~aiiDSGTt~~~lP~~ 229 (342)
T 2qzx_A 155 AYSLYLNSAE--ASTGQIIFGGIDKAKYSGSLVDLPITSEKKLTVGLRSVNVRGRNVD---ANTNVLLDSGTTISYFTRS 229 (342)
T ss_dssp EEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEE---EEEEEEECTTCSSEEECHH
T ss_pred EEEEEeCCCC--CCCeEEEECccchhhEecceEEEeccCCceEEEEEeEEEECCEecC---CCcCEEEeCCCCCEEcCHH
Confidence 9999998752 3389999999999999999999999998999999999999998874 2368999999999999999
Q ss_pred HHHHHHHHhCCC--------ceEEEeCCc---eeccc-CCEEEEEecCCcCcccc---ccccCceEeCC
Q 018462 297 VVAQINHAIGAE--------GIVSMQCKT---VVFEY-GNMIWEFLISGVQPETV---CSDIGLCVYNG 350 (355)
Q Consensus 297 ~~~~i~~~i~~~--------~~~~v~C~~---i~~~f-g~~~~~~~~~~~~~~~~---~~~~~~C~~~~ 350 (355)
++++|.+++++. +.|.+||+. +.|.| |+.+|+||++++.-... ..+.+.|++..
T Consensus 230 ~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~p~i~f~f~~g~~~~i~~~~~~~~~~~~~~~~~~~C~~~i 298 (342)
T 2qzx_A 230 IVRNILYAIGAQMKFDSAGNKVYVADCKTSGTIDFQFGNNLKISVPVSEFLFQTYYTSGKPFPKCEVRI 298 (342)
T ss_dssp HHHHHHHHHTCEEEECTTSCEEEEECTTCCCEEEEEETTTEEEEEEGGGGEECCBCTTSCBCSSEEESE
T ss_pred HHHHHHHHhCCeeeeccCCCcEEEEECCCCCcEEEEECCCcEEEEcHHHhcccccccCCCCCCccEEEE
Confidence 999999999873 378999984 78899 79999999999832211 12346798753
No 23
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1.4e-50 Score=380.09 Aligned_cols=270 Identities=30% Similarity=0.493 Sum_probs=232.0
Q ss_pred eEeceecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCC--CC------CCcccCCCCcccCCCCcceeecCceEEE
Q 018462 69 VVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSK--CL------FSISCYLHSRYRARLSRTYTKIGVPCKI 140 (355)
Q Consensus 69 ~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~--C~------~~~~C~~~~~y~~~~Sst~~~~~~~~~~ 140 (355)
.++|.+. +.+|+++|+||||||++.|++||||+++||++++ |. ....|..++.|+|++|+||+..++.|.+
T Consensus 4 ~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i 82 (342)
T 3pvk_A 4 PVTLHNE-QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLNTPFKI 82 (342)
T ss_dssp EEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEEEEEEE
T ss_pred ceEEecC-CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecCCeEEE
Confidence 4677774 6899999999999999999999999999999765 73 2357988999999999999999999999
Q ss_pred EeCCcc-EEEeEEEeeeeeeeeeecCcEEEEEEecCCccccccccceeeccccccccCC-CCCchhHHHHHcCCCCccEE
Q 018462 141 HYGSGQ-ISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAG-NATPLWYNMVRQGHISQKIF 218 (355)
Q Consensus 141 ~Y~~g~-~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~-~~~~~~~~l~~~g~i~~~~f 218 (355)
.|++|+ +.|.+++|+|+|++..++++.||++.... ..+||||||++..+.. ...+++++|++||+|++++|
T Consensus 83 ~Yg~gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~L~~qg~i~~~~f 155 (342)
T 3pvk_A 83 GYGDGSSSQGTLYKDTVGFGGVSIKNQVLADVDSTS-------IDQGILGVGYKTNEAGGSYDNVPVTLKKQGVIAKNAY 155 (342)
T ss_dssp ECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGCSSCSSCCHHHHHHHTTSSSSSEE
T ss_pred EecCCCeEEEEEEEEEEEECCEEecceEEEEEEccC-------CCccEEEecCccccccccCCcHHHHHHhcCCCCCceE
Confidence 999998 89999999999999999999999998754 3599999999886543 34678999999999999999
Q ss_pred EEEecCCCCCCcccEEEECCcCCCCcccceEEEeccCcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHH
Q 018462 219 SLWLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVV 298 (355)
Q Consensus 219 s~~l~~~~~~~~~G~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~ 298 (355)
|+||++.. ...|+|+|||+|+++|.|+++|+|+..+.+|.|.+++|.++++.+. ..+..++|||||+++++|++++
T Consensus 156 s~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~--~~~~~~iiDSGtt~~~lP~~~~ 231 (342)
T 3pvk_A 156 SLYLNSPD--AATGQIIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTIN--TDNVDVLLDSGTTITYLQQDLA 231 (342)
T ss_dssp EEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEE--EEEEEEEECTTCSSEEECHHHH
T ss_pred EEEeCCCC--CCCcEEEECccCccceeeeeEEeecCccceEEEEEeEEEECCEEec--CCCceEEEeCCCCCeecCHHHH
Confidence 99998753 2389999999999999999999999998999999999999999874 3347899999999999999999
Q ss_pred HHHHHHhCCC--------ceEEEeCCc---eecccC-CEEEEEecCCcCccccc-cc--cCceEeCC
Q 018462 299 AQINHAIGAE--------GIVSMQCKT---VVFEYG-NMIWEFLISGVQPETVC-SD--IGLCVYNG 350 (355)
Q Consensus 299 ~~i~~~i~~~--------~~~~v~C~~---i~~~fg-~~~~~~~~~~~~~~~~~-~~--~~~C~~~~ 350 (355)
++|.+++++. +.|.+||+. +.|.|+ +.+|+||++++.-.... .+ .+.|++..
T Consensus 232 ~~i~~~~~~~~~~~~~~~~~~~~~C~~~p~i~f~f~~g~~~~vp~~~~~~~~~~~~g~~~~~C~~~i 298 (342)
T 3pvk_A 232 DQIIKAFNGKLTQDSNGNSFYEVDCNLSGDVVFNFSKNAKISVPASEFAASLQGDDGQPYDKCQLLF 298 (342)
T ss_dssp HHHHHHTTCEEEECTTSCEEEEECSCCCSEEEEEESTTCEEEEEGGGGEEC----------CEEESE
T ss_pred HHHHHHcCCeecccCCCceEEEEecCCCCceEEEECCCCEEEEcHHHheeeccccCCCcCCeeEEEE
Confidence 9999999874 249999994 788997 89999999998332111 11 37898764
No 24
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=1.4e-49 Score=370.64 Aligned_cols=263 Identities=25% Similarity=0.378 Sum_probs=228.0
Q ss_pred CCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCCCcccCCCCcccCCCCcceeecCceEEEEeCCcc-EEEeEEEe
Q 018462 76 LDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQ-ISGFFSQD 154 (355)
Q Consensus 76 ~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~-~~G~~~~D 154 (355)
.+.+|+++|+|| ||+|.|+|||||+++||++..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ +.|.+++|
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 87 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELP-SSEQTGHDLYTPSSSA-TKLSGYSWDISYGDGSSASGDVYRD 87 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSC-HHHHTTSCCCBCCSSC-EECTTCBEEEECSSSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCC-ccccCCCCCCCchhcC-CccCCCEEEEEeCCCCEEEEEEEEe
Confidence 578999999999 89999999999999999999997 3457788999999999 7778999999999998 89999999
Q ss_pred eeeeeeeeecCcEEEEEEecCCccccccccceeeccccccccC---CCCCchhHHHHHcCCCCccEEEEEecCCCCCCcc
Q 018462 155 NVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA---GNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVG 231 (355)
Q Consensus 155 ~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~---~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~~ 231 (355)
+|+|++..++++.||++....+..+....++||||||++..+. ....+++++|+++ |.+++||+||.+. ..
T Consensus 88 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~l~~~----~~ 161 (325)
T 1ibq_A 88 TVTVGGVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQ--LDSPLFAVQLKHD----AP 161 (325)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEEEETT----EE
T ss_pred EEEECCEEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHHHh--cCCcEEEEEecCC----CC
Confidence 9999999999999999998654323335779999999988775 3567899999987 8899999999874 28
Q ss_pred cEEEECCcCCCCcccceEEEecc-CcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHHHHHHHHh-CCC-
Q 018462 232 GEIIFGGFDWRHFRGSHIYVPIT-EKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAI-GAE- 308 (355)
Q Consensus 232 G~l~~Gg~d~~~~~g~l~~~p~~-~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i-~~~- 308 (355)
|+|+|||+|+++|.|+++|+|+. ..++|.|.+++|+|+++.+ +..+..++|||||+++++|++++++|.+++ ++.
T Consensus 162 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~~ 239 (325)
T 1ibq_A 162 GVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSS--SSSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQE 239 (325)
T ss_dssp EEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCC--BSCCEEEEECTTCCSEEECHHHHHHHHTTSTTCBC
T ss_pred ceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeec--cCCCceEEEeCCCCcEeCCHHHHHHHHHhCCCceE
Confidence 99999999999999999999997 5789999999999999865 456789999999999999999999999999 542
Q ss_pred ----ceEEEeCC----ceecccCCEEEEEecCCcCccccccccCceEeCC
Q 018462 309 ----GIVSMQCK----TVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNG 350 (355)
Q Consensus 309 ----~~~~v~C~----~i~~~fg~~~~~~~~~~~~~~~~~~~~~~C~~~~ 350 (355)
+.|.+||+ .+.|.||+.+|+||++++.-.....+.+.|++..
T Consensus 240 ~~~~g~~~~~C~~~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~~~C~~~i 289 (325)
T 1ibq_A 240 SYEAGGYVFSCSTDLPDFTVVIGDYKAVVPGKYINYAPVSTGSSTCYGGI 289 (325)
T ss_dssp CSSSSSCEEETTCCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESE
T ss_pred cCcCCeEEEEcCCCCCcEEEEECCEEEEECHHHhcccccCCCCCeEEEEE
Confidence 67899997 4788999999999999983222222447898753
No 25
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=2.2e-49 Score=368.96 Aligned_cols=259 Identities=24% Similarity=0.344 Sum_probs=226.4
Q ss_pred CCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCCCcccCCCCcccCCCCcceeecCceEEEEeCCcc-EEEeEEEe
Q 018462 76 LDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQ-ISGFFSQD 154 (355)
Q Consensus 76 ~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~-~~G~~~~D 154 (355)
.+.+|+++|+|| ||+|+|+|||||+++||+|..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ +.|.+++|
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 88 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTP-SSERSGHDYYTPGSSA-QKIDGATWSISYGDGSSASGDVYKD 88 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTCCCBCCCTTC-EEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCC-cccccCCCCCCccccC-CccCCCeEEEEcCCCCeEEEEEEEE
Confidence 578999999999 89999999999999999999997 3457788999999999 8778899999999999 89999999
Q ss_pred eeeeeeeeecCcEEEEEEecCCccccccccceeeccccccccC---CCCCchhHHHHHcCCCCccEEEEEecCCCCCCcc
Q 018462 155 NVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA---GNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVG 231 (355)
Q Consensus 155 ~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~---~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~~ 231 (355)
+|+|++..++++.||++....+..+....++||||||++..+. ....+++++|++| |.+++||+||.+. ..
T Consensus 89 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~L~~~----~~ 162 (323)
T 1izd_A 89 KVTVGGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS--LSEPIFAVALKHN----AP 162 (323)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEECCTT----SC
T ss_pred EEEECCEEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHHh--ccCcEEEEEccCC----CC
Confidence 9999999999999999998654323335679999999998775 3567899999987 8899999999874 27
Q ss_pred cEEEECCcCCCCcccceEEEecc-CcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHHHHHHHHhC-CC-
Q 018462 232 GEIIFGGFDWRHFRGSHIYVPIT-EKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIG-AE- 308 (355)
Q Consensus 232 G~l~~Gg~d~~~~~g~l~~~p~~-~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~-~~- 308 (355)
|+|+|||+|+++|+|+++|+|+. ..++|.|.+++|+|++ .+ +..+..++|||||+++++|++++++|.+++. +.
T Consensus 163 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~--~~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~~ 239 (323)
T 1izd_A 163 GVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DS--SSDSITGIADTGTTLLLLDDSIVDAYYEQVNGASY 239 (323)
T ss_dssp EEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EE--ECCCEEEEECTTCCSEEECHHHHHHHHTTSTTCEE
T ss_pred CEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-cc--cCCCceEEEeCCCcceeCCHHHHHHHHHhCCCcEE
Confidence 99999999999999999999996 5789999999999999 54 5677899999999999999999999999994 42
Q ss_pred ----ceEEEeCC----ceecccCCEEEEEecCCcCccccccccCceEeC
Q 018462 309 ----GIVSMQCK----TVVFEYGNMIWEFLISGVQPETVCSDIGLCVYN 349 (355)
Q Consensus 309 ----~~~~v~C~----~i~~~fg~~~~~~~~~~~~~~~~~~~~~~C~~~ 349 (355)
+.|.+||+ .+.|.||+.+|+||++++.-.. .+.+.|+++
T Consensus 240 ~~~~g~~~~~C~~~~P~i~f~fgg~~~~i~~~~~~~~~--~~~~~C~~~ 286 (323)
T 1izd_A 240 DSSQGGYVFPSSASLPDFSVTIGDYTATVPGEYISFAD--VGNGQTFGG 286 (323)
T ss_dssp ETTTTEEEEETTCCCCCEEEEETTEEEEECHHHHEEEE--CSTTEEEES
T ss_pred cCcCCEEEEECCCCCceEEEEECCEEEecCHHHeEEec--CCCCeEEEE
Confidence 78999997 4788999999999999983221 246789874
No 26
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=2.8e-49 Score=368.34 Aligned_cols=260 Identities=25% Similarity=0.373 Sum_probs=225.1
Q ss_pred CCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCCCcccCCCCcccCCCCcceeecCceEEEEeCCcc-EEEeEEEe
Q 018462 76 LDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQ-ISGFFSQD 154 (355)
Q Consensus 76 ~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~-~~G~~~~D 154 (355)
.+.+|+++|+|| ||+|.|+|||||+++||++..|. ...|..++.|+|++|+ ++..++.|.++|++|+ ++|.+++|
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 88 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELP-ASQQSGHSVYNPSATG-KELSGYTWSISYGDGSSASGNVFTD 88 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCHHHHC-EEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-chhccCCCCCCcccCC-cccCCCeEEEEeCCCCeEEEEEEEE
Confidence 578999999999 89999999999999999999997 3457788999999999 8878899999999999 89999999
Q ss_pred eeeeeeeeecCcEEEEEEecCCccccccccceeeccccccccCC---CCCchhHHHHHcCCCCccEEEEEecCCCCCCcc
Q 018462 155 NVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAG---NATPLWYNMVRQGHISQKIFSLWLNQDPNSEVG 231 (355)
Q Consensus 155 ~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~---~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~~ 231 (355)
+|+|++..++++.||++....+..+....++||||||++..+.. ...+++++|+++ |.+++||+||.+. ..
T Consensus 89 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~----~~ 162 (323)
T 1bxo_A 89 SVTVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS--LAQPLFAVALKHQ----QP 162 (323)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGG--BSSSEEEEECCSS----SC
T ss_pred EEEECCEEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHHh--cCCcEEEEEEeCC----CC
Confidence 99999999999999999986543233356799999999887652 467899999987 8999999999874 27
Q ss_pred cEEEECCcCCCCcccceEEEecc-CcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHHHHHHHHh-CCC-
Q 018462 232 GEIIFGGFDWRHFRGSHIYVPIT-EKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAI-GAE- 308 (355)
Q Consensus 232 G~l~~Gg~d~~~~~g~l~~~p~~-~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i-~~~- 308 (355)
|+|+|||+|+++|+|+++|+|+. ..++|.|.+++|+|++ + +..++.++|||||+++++|++++++|++++ ++.
T Consensus 163 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~--~--~~~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~ 238 (323)
T 1bxo_A 163 GVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS--Q--SGDGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQ 238 (323)
T ss_dssp EEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT--E--EEEEEEEEECTTCSSEEECHHHHHHHHTTSTTCEE
T ss_pred ceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC--c--cCCCceEEEeCCCCceeCCHHHHHHHHHhCCCceE
Confidence 99999999999999999999996 5789999999999999 2 345678999999999999999999999999 542
Q ss_pred ----ceEEEeCC----ceecccCCEEEEEecCCcCccccccccCceEeCC
Q 018462 309 ----GIVSMQCK----TVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNG 350 (355)
Q Consensus 309 ----~~~~v~C~----~i~~~fg~~~~~~~~~~~~~~~~~~~~~~C~~~~ 350 (355)
+.|.+||+ .+.|.||+.+|+||++++.-... .+.+.|+++.
T Consensus 239 ~~~~g~~~~~C~~~~P~i~f~fgg~~~~l~~~~~~~~~~-~~~~~C~~~i 287 (323)
T 1bxo_A 239 DSNAGGYVFDCSTNLPDFSVSISGYTATVPGSLINYGPS-GDGSTCLGGI 287 (323)
T ss_dssp ETTTTEEEECTTCCCCCEEEEETTEEEEECHHHHEEEEC-SSSSCEEESE
T ss_pred cCcCCEEEEECCCCCceEEEEECCEEEEECHHHeEEecc-CCCCeEEEEE
Confidence 78999997 47899999999999999832211 2447898753
No 27
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=1.1e-47 Score=360.22 Aligned_cols=260 Identities=27% Similarity=0.456 Sum_probs=221.9
Q ss_pred eeEeceecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCCCcccCCCCcccCCCCcceeecCceEEEEeCCccE
Q 018462 68 DVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQI 147 (355)
Q Consensus 68 ~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~ 147 (355)
..+||.|+ +..|+++|+||||||++.|+|||||+++||+|. +.|+|++|+++ .++.|.++|++|++
T Consensus 3 ~~~~l~n~-~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~Ss~~--~~~~~~i~Yg~Gs~ 68 (340)
T 1wkr_A 3 GSVPATNQ-LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTSTSSA--TSDKVSVTYGSGSF 68 (340)
T ss_dssp EEEEEEEC-SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTTCEE--EEEEEEEECSSCEE
T ss_pred ccEeeecc-CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCCccc--cCceEEEEECCcEE
Confidence 45899997 679999999999999999999999999999742 57999888764 56899999999999
Q ss_pred EEeEEEeeeeeeeeeecCcEEEEEEecCCccccccccceeeccccccccC--------CCCCchhHHHHHcCCCCccEEE
Q 018462 148 SGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA--------GNATPLWYNMVRQGHISQKIFS 219 (355)
Q Consensus 148 ~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~--------~~~~~~~~~l~~~g~i~~~~fs 219 (355)
+|.+++|+|+|++..++++.||++....+ + ..++||||||++..+. ....+++++|++||+|++++||
T Consensus 69 ~G~~~~Dtv~~g~~~v~~~~fg~~~~~~~--~--~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS 144 (340)
T 1wkr_A 69 SGTEYTDTVTLGSLTIPKQSIGVASRDSG--F--DGVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLA 144 (340)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEES--C--TTCSEEEECSCGGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEE
T ss_pred EEEEEEEEEEECCEEEcceEEEEEEccCC--C--cCCCcEEECCccccccccccccccccCCCHHHHHHHcCCCCCCEEE
Confidence 99999999999999999999999988643 2 2579999999988765 3457899999999999999999
Q ss_pred EEecCCC-CCCcccEEEECCcCCCCcccceEEEeccC----cceeEEEEeeEEEcC-eEeEeecCCeeEEEccCccCccc
Q 018462 220 LWLNQDP-NSEVGGEIIFGGFDWRHFRGSHIYVPITE----KGYWQIKVGDILIEN-SSTGFCEDGCTAILDSGTSVLAG 293 (355)
Q Consensus 220 ~~l~~~~-~~~~~G~l~~Gg~d~~~~~g~l~~~p~~~----~~~w~v~~~~i~vg~-~~~~~~~~~~~aiiDTGt~~i~l 293 (355)
+||.+.. +....|+|+|||+|+++|.|+++|+|+.+ .+||.|. ++|.+++ +.+. ....++|||||+++++
T Consensus 145 ~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l~---~~~~aiiDSGTt~~~l 220 (340)
T 1wkr_A 145 VSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSIL---SSTAGIVDTGTTLTLI 220 (340)
T ss_dssp EECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTTEEEE---EEEEEEECTTBCSEEE
T ss_pred EEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCCeEcc---CCCeEEEeCCcccccC
Confidence 9998742 22348999999999999999999999987 7899999 9999998 7663 2368999999999999
Q ss_pred CHHHHHHHHHHhCCC-----ceEEEeCC------ceecccCCEEEEEecCCc-Cccccc----cccCceEeC
Q 018462 294 PTTVVAQINHAIGAE-----GIVSMQCK------TVVFEYGNMIWEFLISGV-QPETVC----SDIGLCVYN 349 (355)
Q Consensus 294 P~~~~~~i~~~i~~~-----~~~~v~C~------~i~~~fg~~~~~~~~~~~-~~~~~~----~~~~~C~~~ 349 (355)
|++++++|.+++++. +.|.+||+ .+.|.||++.|+|+++++ .+.... .+.+.|++.
T Consensus 221 P~~~~~~l~~~~~a~~~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~ 292 (340)
T 1wkr_A 221 ASDAFAKYKKATGAVADNNTGLLRLTTAQYANLQSLFFTIGGQTFELTANAQIWPRNLNTAIGGSASSVYLI 292 (340)
T ss_dssp CHHHHHHHHHHHTCEECTTTSSEEECHHHHHTCCCEEEEETTEEEEECTGGGBCCGGGGGGGTCCSSCEEBC
T ss_pred CHHHHHHHHHhhCCEEcCCCCeEEeeccccccCCcEEEEECCEEEEEcHHHhccccccccccCCCCceEEEE
Confidence 999999999999874 67999996 478999999999999997 333211 124678764
No 28
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=7.6e-49 Score=381.53 Aligned_cols=273 Identities=26% Similarity=0.390 Sum_probs=223.8
Q ss_pred EeceecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCCCcccCCCCcccCCCCcceeecCceEEEEeCCccEEE
Q 018462 70 VYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQISG 149 (355)
Q Consensus 70 ~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~~G 149 (355)
.+|.+..+..|+++|+||||||+|+|+|||||+++||+|..| |..++.|+|++|+||+..++.|.+.|++|++.|
T Consensus 66 ~~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c-----c~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G 140 (455)
T 3lpj_A 66 DNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEG 140 (455)
T ss_dssp TCEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEE
T ss_pred ccccCCCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc-----cccCCcccCCCCCCcccCCccEEEEeCCeEEEE
Confidence 345566678999999999999999999999999999999987 667899999999999999999999999999999
Q ss_pred eEEEeeeeeee-eeec-CcEEEEEEecCCccccccccceeeccccccccCC--CCCchhHHHHHcCCCCccEEEEEecCC
Q 018462 150 FFSQDNVKIGD-MIIK-DQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAG--NATPLWYNMVRQGHISQKIFSLWLNQD 225 (355)
Q Consensus 150 ~~~~D~v~ig~-~~~~-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~--~~~~~~~~l~~~g~i~~~~fs~~l~~~ 225 (355)
.+++|+|+|++ ..+. .+.|+++............++||||||++..+.. ...+++++|++|++|+ ++||+||.+.
T Consensus 141 ~~~~Dtv~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~L~~~ 219 (455)
T 3lpj_A 141 ELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGA 219 (455)
T ss_dssp EEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCC
T ss_pred EEEEEEEEECCCcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHccCCC-ceeEEEeccc
Confidence 99999999984 3332 2567777665432223457899999999988764 3688999999999997 9999999864
Q ss_pred CC--------CCcccEEEECCcCCCCcccceEEEeccCcceeEEEEeeEEEcCeEeEeec---CCeeEEEccCccCcccC
Q 018462 226 PN--------SEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCE---DGCTAILDSGTSVLAGP 294 (355)
Q Consensus 226 ~~--------~~~~G~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~---~~~~aiiDTGt~~i~lP 294 (355)
.. ....|+|+|||+|+++|.|+++|+|+.+.+||.|.+++|.|+++.+.+.. ....++|||||+++++|
T Consensus 220 ~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP 299 (455)
T 3lpj_A 220 GFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLP 299 (455)
T ss_dssp SSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTSSSEEEE
T ss_pred cccccccccccCCCceEEECCcCcccccCceEEEecCCCceeEEEEeEEEECCEEccccccccCCCeEEEECCCcceeCC
Confidence 11 23489999999999999999999999999999999999999999875322 25689999999999999
Q ss_pred HHHHHHHHHHhCCC-----------ceEEEeCCc-----------eecccCCE------EEEEecCCcCcccccc--ccC
Q 018462 295 TTVVAQINHAIGAE-----------GIVSMQCKT-----------VVFEYGNM------IWEFLISGVQPETVCS--DIG 344 (355)
Q Consensus 295 ~~~~~~i~~~i~~~-----------~~~~v~C~~-----------i~~~fg~~------~~~~~~~~~~~~~~~~--~~~ 344 (355)
.+++++|++++++. ..|.++|+. +.|.|++. +|+|++++|.-..... ..+
T Consensus 300 ~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~ 379 (455)
T 3lpj_A 300 KKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQD 379 (455)
T ss_dssp HHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSC
T ss_pred HHHHHHHHHHhhhhccccccCcccccCcceecccccCCchhcCCcEEEEEcCCCcCceEEEEECHHHheEeccCCCCCCc
Confidence 99999999999653 123689963 67888876 4999999983221111 135
Q ss_pred ceEe
Q 018462 345 LCVY 348 (355)
Q Consensus 345 ~C~~ 348 (355)
.|+.
T Consensus 380 ~C~~ 383 (455)
T 3lpj_A 380 DCYK 383 (455)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 7983
No 29
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.2e-47 Score=365.51 Aligned_cols=272 Identities=25% Similarity=0.386 Sum_probs=220.4
Q ss_pred EeceecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCCCcccCCCCcccCCCCcceeecCceEEEEeCCccEEE
Q 018462 70 VYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQISG 149 (355)
Q Consensus 70 ~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~~G 149 (355)
.+|.+..+..|+++|+||||||+|.|+|||||+++||++..|. .| ++.|+|++|+||+..++.|.+.|++|+++|
T Consensus 5 ~~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~---~~--~~~f~~~~SsT~~~~~~~~~i~Yg~Gs~~G 79 (383)
T 2ewy_A 5 DNLQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHS---YI--DTYFDTERSSTYRSKGFDVTVKYTQGSWTG 79 (383)
T ss_dssp TCEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBT---TB--SCCCCGGGCTTCEEEEEEEEEECSSCEEEE
T ss_pred eeccCCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCC---cc--ccCcccccCccceeCCceEEEEECCcEEEE
Confidence 4677888889999999999999999999999999999999885 34 688999999999999999999999999999
Q ss_pred eEEEeeeeeeeee-ec-CcEEEEEEecCCccccccccceeeccccccccC--CCCCchhHHHHHcCCCCccEEEEEecCC
Q 018462 150 FFSQDNVKIGDMI-IK-DQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA--GNATPLWYNMVRQGHISQKIFSLWLNQD 225 (355)
Q Consensus 150 ~~~~D~v~ig~~~-~~-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~--~~~~~~~~~l~~~g~i~~~~fs~~l~~~ 225 (355)
.+++|+|+|++.. .. .+.|++.....+.......++||||||++..+. ....+++++|++|+.| +++||+||++.
T Consensus 80 ~~~~Dtv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~~i-~~~FS~~l~~~ 158 (383)
T 2ewy_A 80 FVGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANI-PNVFSMQMCGA 158 (383)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHHTC-CSCEEEEECCC
T ss_pred EEEEEEEEECCCccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHHHccCC-CcceEEEeecc
Confidence 9999999998532 22 245777654333211234679999999998875 4567899999999999 79999999752
Q ss_pred -----CCCCcccEEEECCcCCCCcccceEEEeccCcceeEEEEeeEEEcCeEeEeecC---CeeEEEccCccCcccCHHH
Q 018462 226 -----PNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCED---GCTAILDSGTSVLAGPTTV 297 (355)
Q Consensus 226 -----~~~~~~G~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~---~~~aiiDTGt~~i~lP~~~ 297 (355)
.+....|+|+|||+|+++|.|+++|+|+.++.+|.|.+++|+|+++.+.+... ...++|||||+++++|+++
T Consensus 159 ~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~ 238 (383)
T 2ewy_A 159 GLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKV 238 (383)
T ss_dssp ---------CCEEEEETSCCGGGCCSCEEEEECSSBTTBBCCEEEEEETTEECCCCTTTTTSSCEEECTTCSSEEEEHHH
T ss_pred ccccccCCCCCeEEEeCccchhhccCccEEEecCCCceEEEEEEEEEECCEEccccccccCCccEEEEcCCccccCCHHH
Confidence 12234899999999999999999999999999999999999999988753222 4689999999999999999
Q ss_pred HHHHHHHhCCC--------c---eEEEeCCc-----------eecccCCE------EEEEecCCcCcccc-ccccCceE
Q 018462 298 VAQINHAIGAE--------G---IVSMQCKT-----------VVFEYGNM------IWEFLISGVQPETV-CSDIGLCV 347 (355)
Q Consensus 298 ~~~i~~~i~~~--------~---~~~v~C~~-----------i~~~fg~~------~~~~~~~~~~~~~~-~~~~~~C~ 347 (355)
+++|++++++. + .|.++|.. +.|.|++. +|+|+++++.-... ......|+
T Consensus 239 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~C~ 317 (383)
T 2ewy_A 239 FDAVVEAVARASLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRITILPQLYIQPMMGAGLNYECY 317 (383)
T ss_dssp HHHHHHHHHHTTCSSCCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCCTTCSEEE
T ss_pred HHHHHHHHhhhcccccCccccccccccccccCCcccHhhCCcEEEEECCCCCCceEEEEEChHHheeecccCCCCceeE
Confidence 99999999653 1 24789962 56788764 78999988732211 12356797
No 30
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=2.8e-47 Score=365.18 Aligned_cols=270 Identities=27% Similarity=0.418 Sum_probs=218.4
Q ss_pred ceecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCCCcccCCCCcccCCCCcceeecCceEEEEeCCccEEEeE
Q 018462 72 LNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQISGFF 151 (355)
Q Consensus 72 l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~~G~~ 151 (355)
|....+..|+++|+||||||+|+|+|||||+++||++..| |..++.|+|++|+||+..++.|.+.|++|++.|.+
T Consensus 22 l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c-----~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~ 96 (402)
T 3vf3_A 22 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGEL 96 (402)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEEE
T ss_pred ccCCCCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC-----CcccCCcCcccCcccccCCCEEEEEECcEEEEEEE
Confidence 4445567999999999999999999999999999999987 56689999999999999999999999999999999
Q ss_pred EEeeeeee-eeeecC-cEEEEEEecCCccccccccceeeccccccccCCC--CCchhHHHHHcCCCCccEEEEEecCCC-
Q 018462 152 SQDNVKIG-DMIIKD-QEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGN--ATPLWYNMVRQGHISQKIFSLWLNQDP- 226 (355)
Q Consensus 152 ~~D~v~ig-~~~~~~-~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~--~~~~~~~l~~~g~i~~~~fs~~l~~~~- 226 (355)
++|+|+|+ +..++. +.|+++............++||||||++..+... ..+++++|++|++|+ ++||+||++..
T Consensus 97 ~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~l~~~~~ 175 (402)
T 3vf3_A 97 GTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAGF 175 (402)
T ss_dssp EEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCC-
T ss_pred EEEEEEECCccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHccCCc-cceEEEeecccc
Confidence 99999998 444443 3466665544322234578999999999887643 688999999999997 99999997531
Q ss_pred ----C---CCcccEEEECCcCCCCcccceEEEeccCcceeEEEEeeEEEcCeEeEeec---CCeeEEEccCccCcccCHH
Q 018462 227 ----N---SEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCE---DGCTAILDSGTSVLAGPTT 296 (355)
Q Consensus 227 ----~---~~~~G~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~---~~~~aiiDTGt~~i~lP~~ 296 (355)
. ....|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+.+.. ....++|||||+++++|.+
T Consensus 176 ~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~ 255 (402)
T 3vf3_A 176 PLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKK 255 (402)
T ss_dssp ------------EEEEESSCCGGGEEEEEEEEECSSBTTBEECEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHH
T ss_pred cccccccccCCCCEEEeCCcCcccccCceEEEeCCcCcEEEEEEeEEEECCEEecccccccCCCeEEEECCCCcccCCHH
Confidence 0 23489999999999999999999999999999999999999999875322 2568999999999999999
Q ss_pred HHHHHHHHhCCC--------c---eEEEeCCc-----------eecccCCE------EEEEecCCcCcccccc-c-cCce
Q 018462 297 VVAQINHAIGAE--------G---IVSMQCKT-----------VVFEYGNM------IWEFLISGVQPETVCS-D-IGLC 346 (355)
Q Consensus 297 ~~~~i~~~i~~~--------~---~~~v~C~~-----------i~~~fg~~------~~~~~~~~~~~~~~~~-~-~~~C 346 (355)
++++|++++++. + .|.++|.. +.|.|++. +|+|+++++.-..... . .+.|
T Consensus 256 ~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C 335 (402)
T 3vf3_A 256 VFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDC 335 (402)
T ss_dssp HHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEECSSTTEEEEEEECHHHHEEECCCGGGTTEEE
T ss_pred HHHHHHHHHhhhccccccCccccccccccccccccchHhhCCceEEEEecCCCCceEEEEECHHHheehhccCCCCCceE
Confidence 999999998653 1 23689973 67888875 5899999973221111 1 2479
Q ss_pred E
Q 018462 347 V 347 (355)
Q Consensus 347 ~ 347 (355)
+
T Consensus 336 ~ 336 (402)
T 3vf3_A 336 Y 336 (402)
T ss_dssp E
T ss_pred E
Confidence 8
No 31
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=2.1e-46 Score=358.36 Aligned_cols=274 Identities=26% Similarity=0.409 Sum_probs=220.2
Q ss_pred EeceecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCCCcccCCCCcccCCCCcceeecCceEEEEeCCccEEE
Q 018462 70 VYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQISG 149 (355)
Q Consensus 70 ~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~~G 149 (355)
.+|.+..+..|+++|+||||||+|.|+|||||+++||+|..|. .| ++.|+|++|+||+..++.|.+.|++|+++|
T Consensus 13 ~~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~---~~--~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G 87 (395)
T 2qp8_A 13 DNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHP---FL--HRYYQRQLSSTYRDLRKGVYVPYTQGKWEG 87 (395)
T ss_dssp TCEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCT---TC--SCCCCGGGCTTCEEEEEEEEEECSSCEEEE
T ss_pred eecCCCCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCc---cc--cCCcCcccCCCceeCCceEEEEECCcEEEE
Confidence 3556667889999999999999999999999999999999885 33 689999999999999999999999999999
Q ss_pred eEEEeeeeee-eeeec-CcEEEEEEecCCccccccccceeeccccccccCC--CCCchhHHHHHcCCCCccEEEEEecCC
Q 018462 150 FFSQDNVKIG-DMIIK-DQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAG--NATPLWYNMVRQGHISQKIFSLWLNQD 225 (355)
Q Consensus 150 ~~~~D~v~ig-~~~~~-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~--~~~~~~~~l~~~g~i~~~~fs~~l~~~ 225 (355)
.+++|+|+|+ +..++ .+.|++.............++||||||++..+.. ...+++++|++|++|+ ++||+||++.
T Consensus 88 ~~~~Dtv~ig~g~~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~~i~-~~FS~~L~~~ 166 (395)
T 2qp8_A 88 ELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGA 166 (395)
T ss_dssp EEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCC
T ss_pred EEEeEEEEECCCCCceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHHHHHHccCCc-ceEEEEeccc
Confidence 9999999998 55444 2556766543322112356799999999987653 4678999999999996 8999999864
Q ss_pred CC--------CCcccEEEECCcCCCCcccceEEEeccCcceeEEEEeeEEEcCeEeEeec---CCeeEEEccCccCcccC
Q 018462 226 PN--------SEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCE---DGCTAILDSGTSVLAGP 294 (355)
Q Consensus 226 ~~--------~~~~G~l~~Gg~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~---~~~~aiiDTGt~~i~lP 294 (355)
.- ....|+|+|||+|+++|.|++.|+|+.++.+|.|.+++|+|+++.+.+.. ....++|||||+++++|
T Consensus 167 ~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP 246 (395)
T 2qp8_A 167 GFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLP 246 (395)
T ss_dssp SSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEE
T ss_pred cccccccccccCCCcEEEECCcCcccccCceEEeccCCCceEEEEEEEEEECCEEcccCccccCCceEEEEcCCCcEecC
Confidence 10 12479999999999999999999999999999999999999998874322 23679999999999999
Q ss_pred HHHHHHHHHHhCCC--------ce---EEEeCCc-----------eecccCCE------EEEEecCCcCcccc--ccccC
Q 018462 295 TTVVAQINHAIGAE--------GI---VSMQCKT-----------VVFEYGNM------IWEFLISGVQPETV--CSDIG 344 (355)
Q Consensus 295 ~~~~~~i~~~i~~~--------~~---~~v~C~~-----------i~~~fg~~------~~~~~~~~~~~~~~--~~~~~ 344 (355)
++++++|.+++++. +. |.++|.. +.|.|++. +|+|+++++.-... ..+.+
T Consensus 247 ~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~p~~yi~~~~~~~~~~~ 326 (395)
T 2qp8_A 247 KKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQD 326 (395)
T ss_dssp HHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSC
T ss_pred HHHHHHHHHHHhhhcccccCCccccccccccccccccchHhhCCcEEEEEccCCCCceEEEEECHHHhEeecccCCCCCc
Confidence 99999999999652 11 3689963 56788764 68999988732211 12345
Q ss_pred ceE-eC
Q 018462 345 LCV-YN 349 (355)
Q Consensus 345 ~C~-~~ 349 (355)
.|+ |+
T Consensus 327 ~C~~~~ 332 (395)
T 2qp8_A 327 DCYKFA 332 (395)
T ss_dssp EEEEEC
T ss_pred eEEEEE
Confidence 897 54
No 32
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=2.1e-44 Score=345.17 Aligned_cols=267 Identities=17% Similarity=0.202 Sum_probs=211.7
Q ss_pred ceeEece-ecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCC-----------CCCCCcccCCCCcc------cCCCC
Q 018462 67 ADVVYLN-NYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSS-----------KCLFSISCYLHSRY------RARLS 128 (355)
Q Consensus 67 ~~~~~l~-~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~-----------~C~~~~~C~~~~~y------~~~~S 128 (355)
...+||. |+.+.+|+++|.||||||+|.|+|||||+++||+|. .|. +..|..++.| ++.+|
T Consensus 9 ~~~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~~~Sst~~~~~C~-s~~C~~~~~~~c~~c~~~~~s 87 (403)
T 3aup_A 9 LVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCH-STQCSRANTHQCLSCPAASRP 87 (403)
T ss_dssp CEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSCCCCSSCBCCCTT-BHHHHHTTCCCEEECSSSCBT
T ss_pred cEEEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCCCCCCCCCccCCC-CccccCccccCccccCCCCCC
Confidence 3458888 788999999999999999999999999999999999 554 3457777777 55554
Q ss_pred cceeecCceEEEEeC-Ccc-EEEeEEEeeeeeee-----------eeecCcEEEEEEecCCccccccccceeeccccccc
Q 018462 129 RTYTKIGVPCKIHYG-SGQ-ISGFFSQDNVKIGD-----------MIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDI 195 (355)
Q Consensus 129 st~~~~~~~~~~~Y~-~g~-~~G~~~~D~v~ig~-----------~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~ 195 (355)
+ +....+.|.+.|+ +++ +.|.+++|+|+|++ ..++++.|||+.......+....++||||||++..
T Consensus 88 ~-~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~ 166 (403)
T 3aup_A 88 G-CHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPI 166 (403)
T ss_dssp T-BCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEECSSSTT
T ss_pred C-CCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEECCCCCc
Confidence 3 4456789999998 555 89999999999998 88999999999875432133457899999999876
Q ss_pred cCCCCCchhHHHHHcCCCCccEEEEEecCCCCCCcccEEEECCcCCCCc--c-c-----ceEEEeccCc--ceeEEEEee
Q 018462 196 AAGNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVGGEIIFGGFDWRHF--R-G-----SHIYVPITEK--GYWQIKVGD 265 (355)
Q Consensus 196 s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~~G~l~~Gg~d~~~~--~-g-----~l~~~p~~~~--~~w~v~~~~ 265 (355)
+ +..+|. ++.+.+++||+||.+.. ...|+|+||| |+++| . | ++.|+|+..+ ++|.|.+++
T Consensus 167 s------~~~ql~-~~~~~~~~FS~~L~~~~--~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l~~ 236 (403)
T 3aup_A 167 S------LPNQLA-SHFGLQRQFTTCLSRYP--TSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNS 236 (403)
T ss_dssp S------HHHHHH-HHHTCCSEEEEECCSCT--TSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECEEE
T ss_pred C------HHHHHH-hhcCCCCeEEEEcCCCC--CCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEEEE
Confidence 5 666664 55577899999998852 2389999999 99888 5 6 9999999776 899999999
Q ss_pred EEEcCeEe-EeecC--------CeeEEEccCccCcccCHHHHHHHHHHh----CC--------CceEEEeCCc------e
Q 018462 266 ILIENSST-GFCED--------GCTAILDSGTSVLAGPTTVVAQINHAI----GA--------EGIVSMQCKT------V 318 (355)
Q Consensus 266 i~vg~~~~-~~~~~--------~~~aiiDTGt~~i~lP~~~~~~i~~~i----~~--------~~~~~v~C~~------i 318 (355)
|.|+++.+ .+... ...+||||||++++||++++++|.++| ++ ...|-++|+. +
T Consensus 237 i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c~~c~~~~~~P~i 316 (403)
T 3aup_A 237 IRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSNKINAYPSV 316 (403)
T ss_dssp EEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCEECGGGCCCCCCE
T ss_pred EEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCceEECCCcCcCCcE
Confidence 99999877 42221 234999999999999999999999999 32 1336789973 7
Q ss_pred ecccCCE---EEEEecCCcCccccccccCceE
Q 018462 319 VFEYGNM---IWEFLISGVQPETVCSDIGLCV 347 (355)
Q Consensus 319 ~~~fg~~---~~~~~~~~~~~~~~~~~~~~C~ 347 (355)
.|.|++. .|+|+++++.-.. .+...|+
T Consensus 317 ~f~f~g~~~~~~~l~~~~y~~~~--~~~~~C~ 346 (403)
T 3aup_A 317 DLVMDKPNGPVWRISGEDLMVQA--QPGVTCL 346 (403)
T ss_dssp EEEESSTTCCEEEECHHHHEEEC-----CEEE
T ss_pred EEEEcCCCceEEEEcccceEEEc--CCCeEEE
Confidence 8899875 9999999983221 1356797
No 33
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=2.8e-43 Score=337.42 Aligned_cols=258 Identities=19% Similarity=0.181 Sum_probs=205.8
Q ss_pred ceeEecee-cCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCC----------CcccCCCCcccCCC-----Ccc
Q 018462 67 ADVVYLNN-YLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLF----------SISCYLHSRYRARL-----SRT 130 (355)
Q Consensus 67 ~~~~~l~~-~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~----------~~~C~~~~~y~~~~-----Sst 130 (355)
...+|+.. ..+.+|+++|+||||||+|.|+|||||+++||+|..|.. +..|..++.|++.. +++
T Consensus 8 ~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c~~Sst~~~v~C~s~~C~~~~~~~~~~c~s~~~~~ 87 (413)
T 3vla_A 8 ALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCRTSQCSLSGSIACGDCFNGPRPG 87 (413)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSSCCCTTCEECBTTSHHHHHTTCCEEECCSSCCBTT
T ss_pred cEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCCCCCCCcCccCCCcccccccccCCCcccccCCCCC
Confidence 34455553 346899999999999999999999999999999976521 34577777787642 345
Q ss_pred eeecCceEEEEeC-Ccc-EEEeEEEeeeeee---------eeeecCcEEEEEEecCCccccccccceeeccccccccCCC
Q 018462 131 YTKIGVPCKIHYG-SGQ-ISGFFSQDNVKIG---------DMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGN 199 (355)
Q Consensus 131 ~~~~~~~~~~~Y~-~g~-~~G~~~~D~v~ig---------~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~ 199 (355)
+....|.|.+.|+ +++ +.|.+++|+|+|+ +..++++.|||+....... ....++||||||++.++
T Consensus 88 c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g-~~~~~dGIlGLg~~~lS--- 163 (413)
T 3vla_A 88 CNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQN-LASGVVGMAGLGRTRIA--- 163 (413)
T ss_dssp BCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTT-SCTTCCEEEECSSSSSS---
T ss_pred CCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccC-cccccccccccCCCCcc---
Confidence 5666789999995 655 7899999999997 3678899999998753211 23568999999999877
Q ss_pred CCchhHHHHHcCCCCccEEEEEecCCCCCCcccEEEECCcCCCC-----cccc-eEEEeccCc--------------cee
Q 018462 200 ATPLWYNMVRQGHISQKIFSLWLNQDPNSEVGGEIIFGGFDWRH-----FRGS-HIYVPITEK--------------GYW 259 (355)
Q Consensus 200 ~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~~G~l~~Gg~d~~~-----~~g~-l~~~p~~~~--------------~~w 259 (355)
+..+|.+++.| +++||+||.+.. ..+|+|+|||+|..+ |.|+ ++|+|+..+ .||
T Consensus 164 ---l~sql~~~~~i-~~~FS~cL~~~~--~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y 237 (413)
T 3vla_A 164 ---LPSQFASAFSF-KRKFAMCLSGST--SSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEY 237 (413)
T ss_dssp ---HHHHHHHHHTC-CSEEEEECCSCS--SSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCSC
T ss_pred ---hHHHHhhhcCC-CceEEEeCCCCC--CCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCceE
Confidence 78899999998 899999999852 248999999998753 7888 999999765 699
Q ss_pred EEEEeeEEEcCeEeEeec--------CCeeEEEccCccCcccCHHHHHHHHHHhCCC-----------ceEEEeCC----
Q 018462 260 QIKVGDILIENSSTGFCE--------DGCTAILDSGTSVLAGPTTVVAQINHAIGAE-----------GIVSMQCK---- 316 (355)
Q Consensus 260 ~v~~~~i~vg~~~~~~~~--------~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~-----------~~~~v~C~---- 316 (355)
.|++++|+||++.+.+.. .++.+||||||++++||.+++++|.++|++. ..+..+|.
T Consensus 238 ~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~C~~~~~ 317 (413)
T 3vla_A 238 FIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACFSTDN 317 (413)
T ss_dssp EECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSCEEECTT
T ss_pred EEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCcceeccCC
Confidence 999999999999876432 3578999999999999999999999887542 11224564
Q ss_pred -----------ceecccCC--EEEEEecCCc
Q 018462 317 -----------TVVFEYGN--MIWEFLISGV 334 (355)
Q Consensus 317 -----------~i~~~fg~--~~~~~~~~~~ 334 (355)
.+.|.|++ ..|+|+++++
T Consensus 318 ~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y 348 (413)
T 3vla_A 318 ILSTRLGPSVPSIDLVLQSESVVWTITGSNS 348 (413)
T ss_dssp CCEETTEECCCCEEEECSSTTCEEEECHHHH
T ss_pred ccccccccCCCcEEEEEcCCcEEEEeCccce
Confidence 25678877 8999999997
No 34
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=4.8e-40 Score=312.66 Aligned_cols=259 Identities=17% Similarity=0.170 Sum_probs=196.6
Q ss_pred eEece-ecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCC-------CCcccCCCCcccCCCCccee-------e
Q 018462 69 VVYLN-NYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCL-------FSISCYLHSRYRARLSRTYT-------K 133 (355)
Q Consensus 69 ~~~l~-~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~-------~~~~C~~~~~y~~~~Sst~~-------~ 133 (355)
.+|+. ++.+.+|+++|+|||| |+|||||+++||+|..|. .+..|..++.|++. |+++. .
T Consensus 4 ~~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~~~~~~~C~s~~C~~~~~~~~~-sc~~~~~~~~~~~ 77 (381)
T 1t6e_X 4 LAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAP-GCPAPSCGSDKHD 77 (381)
T ss_dssp EEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTCCCCCCBTTSHHHHHHHSSCCT-TCCCCCC------
T ss_pred EEeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCCCCCccCCCCchhccccCCCCC-CCCCccCCcCcCC
Confidence 46777 7788999999999997 999999999999996542 13456666778775 33332 1
Q ss_pred cCc-eEEEEeCCcc-EEEeEEEeeeeeee----eeecCc----EEEEEEecCCccccccccceeeccccccccCCCCCch
Q 018462 134 IGV-PCKIHYGSGQ-ISGFFSQDNVKIGD----MIIKDQ----EFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPL 203 (355)
Q Consensus 134 ~~~-~~~~~Y~~g~-~~G~~~~D~v~ig~----~~~~~~----~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~ 203 (355)
..| .|.++|++|+ ++|.+++|+|+|++ ..++++ .|||+.......+ ...++||||||++..+ +
T Consensus 78 ~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~-~~~~dGIlGLg~~~~s------~ 150 (381)
T 1t6e_X 78 KPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASL-PRGSTGVAGLANSGLA------L 150 (381)
T ss_dssp CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTS-CTTEEEEEECSSSTTS------H
T ss_pred CccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCC-CCCCceEEEeCCCcch------h
Confidence 224 5899999999 58999999999985 466665 4699876532222 3578999999998776 7
Q ss_pred hHHHHHcCCCCccEEEEEecCCCCCCcccEEEECCcCCC--CcccceEEEeccCc---ceeEEEEeeEEEcCeEeEeecC
Q 018462 204 WYNMVRQGHISQKIFSLWLNQDPNSEVGGEIIFGGFDWR--HFRGSHIYVPITEK---GYWQIKVGDILIENSSTGFCED 278 (355)
Q Consensus 204 ~~~l~~~g~i~~~~fs~~l~~~~~~~~~G~l~~Gg~d~~--~~~g~l~~~p~~~~---~~w~v~~~~i~vg~~~~~~~~~ 278 (355)
..+|.+++++ +++||+||.+. ..|+|+|||+|.. +|.|+++|+|+..+ .+|.|.+++|+|+++.+.....
T Consensus 151 ~~ql~~~~~~-~~~FS~~L~~~----~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~~ 225 (381)
T 1t6e_X 151 PAQVASAQKV-ANRFLLCLPTG----GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEG 225 (381)
T ss_dssp HHHHHHHHTC-CSEEEEECCSS----SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTT
T ss_pred HHHHhhhccc-CceEEEEeCCC----CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecCCHH
Confidence 7899999854 89999999875 2899999998765 58999999999763 5677999999999988754332
Q ss_pred ---CeeEEEccCccCcccCHHHHHHHHHHhCCC-----------------ceEEEeCC---------------ceecccC
Q 018462 279 ---GCTAILDSGTSVLAGPTTVVAQINHAIGAE-----------------GIVSMQCK---------------TVVFEYG 323 (355)
Q Consensus 279 ---~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~-----------------~~~~v~C~---------------~i~~~fg 323 (355)
.+.+||||||+++++|++++++|.+++.+. ..+..+|. .+.|.|+
T Consensus 226 ~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~ 305 (381)
T 1t6e_X 226 ALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQLGLD 305 (381)
T ss_dssp CSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETTEECCCCEEEEET
T ss_pred HccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcccccCCcCCeEEEEEC
Confidence 356999999999999999999887776431 11235674 3678886
Q ss_pred -CEEEEEecCCcCccccccccCceE
Q 018462 324 -NMIWEFLISGVQPETVCSDIGLCV 347 (355)
Q Consensus 324 -~~~~~~~~~~~~~~~~~~~~~~C~ 347 (355)
+..|+|+++++.-.. .+...|+
T Consensus 306 gg~~~~l~~~~y~~~~--~~~~~Cl 328 (381)
T 1t6e_X 306 GGSDWTMTGKNSMVDV--KQGTACV 328 (381)
T ss_dssp TSCEEEECHHHHEEEE--ETTEEEE
T ss_pred CCcEEEeCCCeEEEEc--CCCeEEE
Confidence 599999999983221 1344675
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=1.8e-33 Score=251.01 Aligned_cols=191 Identities=32% Similarity=0.664 Sum_probs=165.1
Q ss_pred eeeeecCcEEEEEEecCCccccccccceeeccccccccCCCCCchhHHHHHcCCCCccEEEEEecCCCCCCcccEEEECC
Q 018462 159 GDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVGGEIIFGG 238 (355)
Q Consensus 159 g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~~G~l~~Gg 238 (355)
|++++++|.||++....+..+....++||||||++..+.....|++++|++||+|++++||+||++..+....|+|+|||
T Consensus 1 gg~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg 80 (241)
T 1lya_B 1 GGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGG 80 (241)
T ss_dssp CCEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETS
T ss_pred CCeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECC
Confidence 46788999999999876655666788999999999888777788999999999999999999999875433489999999
Q ss_pred cCCCCcccceEEEeccCcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHHHHHHHHhCCC----ceEEEe
Q 018462 239 FDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAE----GIVSMQ 314 (355)
Q Consensus 239 ~d~~~~~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i~~~i~~~----~~~~v~ 314 (355)
+|+++|+|+++|+|+.+.++|.|.+++|+++++.+. +..++.++|||||+++++|.+++++|.+++++. +.|.+|
T Consensus 81 ~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~g~~~~~ 159 (241)
T 1lya_B 81 TDSKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTL-CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPLIQGEYMIP 159 (241)
T ss_dssp CCGGGEEEEEEEEECSSBTTBEEEEEEEEETTSCEE-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEEETTEEEEE
T ss_pred cCHHHcCCceEEEECccccEEEEEEeEEEECCeeEe-ccCCCEEEEECCCccccCCHHHHHHHHHHhCCeeccCCcEEEE
Confidence 999999999999999999999999999999998752 567789999999999999999999999999874 789999
Q ss_pred CC------ceecccCCEEEEEecCCcCccccccccCceEeCC
Q 018462 315 CK------TVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNG 350 (355)
Q Consensus 315 C~------~i~~~fg~~~~~~~~~~~~~~~~~~~~~~C~~~~ 350 (355)
|+ .+.|.||+.+|+||++++.-.....+.+.|+++.
T Consensus 160 C~~~~~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~~~ 201 (241)
T 1lya_B 160 CEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGF 201 (241)
T ss_dssp GGGGGGSCCEEEEETTEEEEECTTTSEEEETTTTSSEEEESE
T ss_pred CCCCccCCeEEEEECCEEEEECHHHhEEEccCCCCCeeEEEE
Confidence 97 3789999999999999983322223357898753
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.93 E-value=5.7e-26 Score=172.41 Aligned_cols=92 Identities=59% Similarity=1.083 Sum_probs=86.5
Q ss_pred eEeceecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCC-CcccCCCCcccCCCCcceeecCceEEEEeCCccE
Q 018462 69 VVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLF-SISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQI 147 (355)
Q Consensus 69 ~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~-~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~~ 147 (355)
.+||.|+.+.+|+++|.||||||+|.|+|||||+++||++..|.. ...|..++.|+|++|+||+..++.|.+.|++|++
T Consensus 4 ~~~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~~~y~p~~SsT~~~~~~~~~i~Yg~Gs~ 83 (97)
T 1lya_A 4 PEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGSL 83 (97)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEE
T ss_pred eEeeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCCCCCCchhCCCceeCCCcEEEEECCcEE
Confidence 589999999999999999999999999999999999999999962 2479889999999999999999999999999999
Q ss_pred EEeEEEeeeeeee
Q 018462 148 SGFFSQDNVKIGD 160 (355)
Q Consensus 148 ~G~~~~D~v~ig~ 160 (355)
.|.+++|+|+|++
T Consensus 84 ~G~~~~Dtv~i~g 96 (97)
T 1lya_A 84 SGYLSQDTVSVPC 96 (97)
T ss_dssp EEEEEEEEEEESC
T ss_pred EEEEEEEEEEECC
Confidence 9999999999975
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=95.85 E-value=0.0026 Score=46.12 Aligned_cols=42 Identities=12% Similarity=0.187 Sum_probs=30.7
Q ss_pred ceEEEeCC------ceecccCCEEEEEecCCcCccccccccCceEeCC
Q 018462 309 GIVSMQCK------TVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNG 350 (355)
Q Consensus 309 ~~~~v~C~------~i~~~fg~~~~~~~~~~~~~~~~~~~~~~C~~~~ 350 (355)
|.|.+||+ ++.|.|||+.|+|+++++.-.....+.+.|+++.
T Consensus 1 G~y~v~C~~~~~~P~i~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~ 48 (87)
T 1b5f_B 1 EELQVDCNTLSSMPNVSFTIGGKKFGLTPEQYILKVGKGEATQCISGF 48 (87)
T ss_dssp CCCEECGGGGGGCCCEEEEETTEEEEECHHHHEEEESCTTTCEEEESE
T ss_pred CcEEEECCCCCcCCcEEEEECCEEEEECHHHhEEEccCCCCCEEEEEE
Confidence 56999998 3788999999999999983322112346898653
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=94.87 E-value=0.035 Score=44.32 Aligned_cols=96 Identities=21% Similarity=0.197 Sum_probs=52.5
Q ss_pred eceecCCceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCCCcccCCCCcccCCCCcceeecCceEEEEeCCcc--EE
Q 018462 71 YLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQ--IS 148 (355)
Q Consensus 71 ~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~--~~ 148 (355)
|..-.....+++++.|+. +++++++|||++.+.+...... .+.-....+. .+. ....+.|. ..
T Consensus 18 p~~~~~~~~~~v~v~InG--~~~~~LvDTGAs~s~is~~~a~---~lgl~~~~~~----~~~------~~a~g~g~~~~~ 82 (148)
T 2i1a_A 18 PEMFTQVPMLYINIEINN--YPVKAFVDTGAQTTIMSTRLAK---KTGLSRMIDK----RFI------GEARGVGTGKII 82 (148)
T ss_dssp -----CCCCCEEEEEETT--EEEEEEECTTCSSCEEEHHHHH---HHTGGGGCBC----CCC-----------------C
T ss_pred chhhcccceEEEEEEECC--EEEEEEEECCCCccccCHHHHH---HcCCCccCCc----ceE------EEEecCCCcccc
Confidence 333345678999999986 8999999999999888532211 1111111111 110 01122222 24
Q ss_pred EeEEEeeeeeeeeeecCcEEEEEEecCCccccccccceeeccc
Q 018462 149 GFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLG 191 (355)
Q Consensus 149 G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg 191 (355)
|.+..+++.+|+...+ ..|.+.. . +.+||||+.
T Consensus 83 ~~~~~~~i~ig~~~~~-~~~~vl~--~-------~~d~iLG~d 115 (148)
T 2i1a_A 83 GRIHQAQVKIETQYIP-CSFTVLD--T-------DIDVLIGLD 115 (148)
T ss_dssp EEEEEEEEEETTEEEE-EEEEEEC--S-------SCSEEECHH
T ss_pred cEEEEEEEEECCEEec-eeEEEec--C-------CCCeEecHH
Confidence 6666778999987764 5554432 1 358999986
No 39
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=92.13 E-value=0.16 Score=40.58 Aligned_cols=91 Identities=15% Similarity=0.262 Sum_probs=52.7
Q ss_pred CceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCCCCCCcccCCCCcccCCCCcceeecCceEEEEeCCcc--EEEeEEEe
Q 018462 77 DAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQ--ISGFFSQD 154 (355)
Q Consensus 77 ~~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g~--~~G~~~~D 154 (355)
-..|++++.|.. ++++++||||++.+.+...-+. .|.-...-+. .+. . ...+.|. ..|.+...
T Consensus 22 ~~~l~v~~~Ing--~~v~~LVDTGAs~s~Is~~~A~---rlGL~~~~~~----~~~-----~-~a~g~G~~~~~g~v~~~ 86 (148)
T 3s8i_A 22 VTMLYINCKVNG--HPLKAFVDSGAQMTIMSQACAE---RCNIMRLVDR----RWA-----G-VAKGVGTQRIIGRVHLA 86 (148)
T ss_dssp CCCCEEEEEETT--EEEEEEECTTCSSCEEEHHHHH---HTTCGGGEEG----GGC-----E-ECCC---CEEEEEEEEE
T ss_pred cCEEEEEEEECC--EEEEEEEeCCCCcEeeCHHHHH---HcCCccccCc----cee-----E-EEEcCCccEEEEEEEEE
Confidence 457899999986 9999999999999988643211 2211100000 000 0 1122222 46777777
Q ss_pred eeeeeeeeecCcEEEEEEecCCccccccccceeeccc
Q 018462 155 NVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLG 191 (355)
Q Consensus 155 ~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg 191 (355)
.+.||+..++ ..|.+.. ....++|||+-
T Consensus 87 ~I~Ig~~~~~-~~~~Vle--------~~~~d~LLGmD 114 (148)
T 3s8i_A 87 QIQIEGDFLQ-CSFSILE--------DQPMDMLLGLD 114 (148)
T ss_dssp EEEETTEEEE-EEEEEET--------TCSSSEEECHH
T ss_pred EEEECCEEEE-EEEEEeC--------CCCcCeeccHH
Confidence 8888887653 4443332 12348999986
No 40
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=85.14 E-value=1.3 Score=32.57 Aligned_cols=30 Identities=23% Similarity=0.269 Sum_probs=25.3
Q ss_pred EEEEEEcCCCcEEEEEEeCCCCceeEeCCCCC
Q 018462 81 YGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCL 112 (355)
Q Consensus 81 ~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~ 112 (355)
.+.+.||. |.+++++|||..++.+...+++
T Consensus 10 ~vtvkI~G--q~~eaLLDTGAD~TVl~~~~~p 39 (99)
T 2hs1_A 10 LVTIKIGG--QLKEALLDTGADDTIIEEMSLP 39 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSEEESCCSSC
T ss_pred EEEEEECC--EEEEEEeccCCCcEEEecccCC
Confidence 46789997 9999999999999999765543
No 41
>3vcm_P Prorenin; aspartic proteases, hydrolase; HET: NAG; 2.93A {Homo sapiens}
Probab=82.62 E-value=1.2 Score=27.13 Aligned_cols=23 Identities=17% Similarity=0.094 Sum_probs=19.7
Q ss_pred ceEEEeeeeeechhhhHHhhhhh
Q 018462 31 GLLRIQLKKRQLGINTINAARLI 53 (355)
Q Consensus 31 ~~~~ipl~~~~~~~~~~~~~~~~ 53 (355)
+++||||+|.++.++.+.+.+..
T Consensus 7 ~l~RIPL~k~kS~R~~l~e~g~~ 29 (43)
T 3vcm_P 7 TFKRIFLKRMPSIRESLKERGVD 29 (43)
T ss_dssp CCEEEEEEECCCHHHHHHHHTCC
T ss_pred ceeEEeeeecccHHHHHHHcCch
Confidence 57899999999999998887654
No 42
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=82.46 E-value=1.5 Score=32.49 Aligned_cols=27 Identities=19% Similarity=0.247 Sum_probs=23.5
Q ss_pred EEEEEEEcCCCcEEEEEEeCCCCceeEeC
Q 018462 80 YYGEIGIGSPPQSFSVVFDTGSSNLWVPS 108 (355)
Q Consensus 80 y~~~i~iGtP~q~~~v~~DTGS~~~wv~~ 108 (355)
-.+.|.||. |.+++++|||..++.+..
T Consensus 9 P~v~v~I~G--q~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 9 PTTIVLIND--TPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEEEH
T ss_pred CEEEEEECC--EEEEEEeccCCCcEEEcc
Confidence 456799996 999999999999999973
No 43
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=82.03 E-value=1.6 Score=32.82 Aligned_cols=32 Identities=19% Similarity=0.294 Sum_probs=26.4
Q ss_pred EEEEEEc---CCCcEEEEEEeCCCCceeEeCCCCC
Q 018462 81 YGEIGIG---SPPQSFSVVFDTGSSNLWVPSSKCL 112 (355)
Q Consensus 81 ~~~i~iG---tP~q~~~v~~DTGS~~~wv~~~~C~ 112 (355)
.+.|.|| +|+|.++.++|||-.++.+...++.
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~lP 46 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALFS 46 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGSC
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccCC
Confidence 4456665 7889999999999999999877664
No 44
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=80.81 E-value=2.3 Score=31.17 Aligned_cols=29 Identities=24% Similarity=0.239 Sum_probs=24.8
Q ss_pred EEEEEEcCCCcEEEEEEeCCCCceeEeCCCC
Q 018462 81 YGEIGIGSPPQSFSVVFDTGSSNLWVPSSKC 111 (355)
Q Consensus 81 ~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C 111 (355)
++.+.||. |.+++++|||..++.+...++
T Consensus 10 ~vti~I~G--q~~e~LLDTGAD~TVl~~~~~ 38 (99)
T 3ec0_A 10 VVTAYIEG--QPVEVLLDTGADDSIVAGIEL 38 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEESSCCC
T ss_pred eEEEEECC--EEEEEEEecCCCceEEcCccc
Confidence 56789997 999999999999999976554
No 45
>1tzs_P Activation peptide from cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=75.06 E-value=1.9 Score=24.36 Aligned_cols=22 Identities=18% Similarity=0.234 Sum_probs=17.4
Q ss_pred ceEEEeeeeeechhhhHHhhhh
Q 018462 31 GLLRIQLKKRQLGINTINAARL 52 (355)
Q Consensus 31 ~~~~ipl~~~~~~~~~~~~~~~ 52 (355)
++++|||+|.++.+..+.+.+.
T Consensus 2 ~l~rIpL~K~~s~r~~l~~~g~ 23 (35)
T 1tzs_P 2 SLHRVPLRRHPSLKKKLRARSQ 23 (35)
T ss_pred cEEEEEeEEchHHHHHHHHccc
Confidence 4789999999988887766543
No 46
>1htr_P Progastricsin (Pro segment); aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_P
Probab=74.72 E-value=2.7 Score=25.01 Aligned_cols=22 Identities=23% Similarity=0.320 Sum_probs=17.9
Q ss_pred eEEEeeeeeechhhhHHhhhhh
Q 018462 32 LLRIQLKKRQLGINTINAARLI 53 (355)
Q Consensus 32 ~~~ipl~~~~~~~~~~~~~~~~ 53 (355)
++||||+|.++.+..+.+.+..
T Consensus 2 l~RIpL~K~~s~R~~l~~~g~~ 23 (43)
T 1htr_P 2 VVKVPLKKFKSIRETMKEKGLL 23 (43)
T ss_dssp CEEEEEEECCCHHHHHHHTTCH
T ss_pred eEEEeeeEcchHHHHHHHcCcH
Confidence 6899999999998887775543
No 47
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=71.63 E-value=4.2 Score=30.69 Aligned_cols=28 Identities=14% Similarity=0.101 Sum_probs=23.5
Q ss_pred EEEEEEEcCCCcEEEEEEeCCCCceeEeCCC
Q 018462 80 YYGEIGIGSPPQSFSVVFDTGSSNLWVPSSK 110 (355)
Q Consensus 80 y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~ 110 (355)
=++ |.||. |.++.++|||..++.+...+
T Consensus 15 P~v-ikI~G--q~~eaLLDTGAD~TVi~~~~ 42 (116)
T 2hah_A 15 EIL-IFVNG--YPIKFLLDTGADITVLNRRD 42 (116)
T ss_dssp EEE-EEETT--EEEEEEECTTCSSCEEEGGG
T ss_pred CEE-EEECC--EEEEEEecCCCCcEEEcccc
Confidence 345 99996 99999999999999997544
No 48
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=70.84 E-value=3.5 Score=32.56 Aligned_cols=29 Identities=14% Similarity=0.200 Sum_probs=24.5
Q ss_pred EEEcCeEeEeecCCeeEEEccCccCcccCHHHHHHH
Q 018462 266 ILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQI 301 (355)
Q Consensus 266 i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i 301 (355)
..|+++.+ .+++|||++.+.++.+.++.+
T Consensus 29 ~~Ing~~v-------~~LVDTGAs~s~Is~~~A~rl 57 (148)
T 3s8i_A 29 CKVNGHPL-------KAFVDSGAQMTIMSQACAERC 57 (148)
T ss_dssp EEETTEEE-------EEEECTTCSSCEEEHHHHHHT
T ss_pred EEECCEEE-------EEEEeCCCCcEeeCHHHHHHc
Confidence 44777754 699999999999999998876
No 49
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=70.34 E-value=4.4 Score=31.69 Aligned_cols=29 Identities=24% Similarity=0.310 Sum_probs=24.4
Q ss_pred EEEcCeEeEeecCCeeEEEccCccCcccCHHHHHHH
Q 018462 266 ILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQI 301 (355)
Q Consensus 266 i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~i 301 (355)
+.|+|+.+ .++||||++.+.++.+..+.+
T Consensus 31 v~InG~~~-------~~LvDTGAs~s~is~~~a~~l 59 (148)
T 2i1a_A 31 IEINNYPV-------KAFVDTGAQTTIMSTRLAKKT 59 (148)
T ss_dssp EEETTEEE-------EEEECTTCSSCEEEHHHHHHH
T ss_pred EEECCEEE-------EEEEECCCCccccCHHHHHHc
Confidence 56788753 699999999999999988775
No 50
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=69.61 E-value=5.5 Score=29.91 Aligned_cols=30 Identities=10% Similarity=0.105 Sum_probs=25.5
Q ss_pred EEEEEEcCCCcEEEEEEeCCCCceeEeCCCCC
Q 018462 81 YGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCL 112 (355)
Q Consensus 81 ~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C~ 112 (355)
.+.+.||. |.++.++|||..++.+...+++
T Consensus 11 ~vti~I~G--q~~eaLLDTGADdTVi~~~~lp 40 (114)
T 3sqf_A 11 SLTLWLDD--KMFTGLINTGADVTIIKLEDWP 40 (114)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEEEGGGSC
T ss_pred eEEEEECC--EEEEEEEccCCCceEEecccCC
Confidence 56688886 9999999999999999876653
No 51
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=64.84 E-value=8.6 Score=34.36 Aligned_cols=44 Identities=16% Similarity=0.185 Sum_probs=32.6
Q ss_pred ccceEEEeccCcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHH
Q 018462 245 RGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVV 298 (355)
Q Consensus 245 ~g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~ 298 (355)
.|.+...|+..+..|.++ |.||.+. ..++||||++.+++|..-.
T Consensus 3 ~g~v~~~~~~~~~~Y~~~---i~iG~Q~-------~~v~~DTGSs~lWv~~~~C 46 (323)
T 1bxo_A 3 SGVATNTPTANDEEYITP---VTIGGTT-------LNLNFDTGSADLWVFSTEL 46 (323)
T ss_dssp CEEEEEEECGGGSCEEEE---EEETTEE-------EEEEEETTCCCEEECBTTS
T ss_pred CCceeeeecCCCCEEEEE---EEECCEE-------EEEEEeCCCcceEEecCCC
Confidence 466667777666777765 6688443 4799999999999997543
No 52
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=63.78 E-value=9.7 Score=29.40 Aligned_cols=31 Identities=16% Similarity=0.270 Sum_probs=25.5
Q ss_pred ceEEEEEEEcCCCcEEEEEEeCCCCceeEeCCC
Q 018462 78 AQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSK 110 (355)
Q Consensus 78 ~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~ 110 (355)
..-++.+.|+. |.+++++|||.+++.+...+
T Consensus 21 ~RP~v~i~I~G--~~~~~LlDTGAd~tVl~~~~ 51 (132)
T 3slz_A 21 PEPRITLKVGG--QPVTFLVDTGAQHSVLTQNP 51 (132)
T ss_dssp CSSEEEEEETT--EEEEEEECTTCSSCEECSCC
T ss_pred CCCEEEEEECC--EEEEEEEeCCCCeEEEcccc
Confidence 34567789986 99999999999999997544
No 53
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=62.13 E-value=9.5 Score=34.10 Aligned_cols=43 Identities=16% Similarity=0.200 Sum_probs=31.7
Q ss_pred cceEEEeccCcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHH
Q 018462 246 GSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVV 298 (355)
Q Consensus 246 g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~ 298 (355)
|.+...|+..+..|.++ |.||.+. ..+++|||++.+++|..-.
T Consensus 3 ~~v~~~~~~~~~~Y~~~---i~iG~Q~-------~~v~~DTGSs~lWv~~~~C 45 (325)
T 1ibq_A 3 GSAVTTPQNNDEEYLTP---VTVGKST-------LHLDFDTGSADLWVFSDEL 45 (325)
T ss_dssp EEEEEEECTTTSCEEEE---EEEBTEE-------EEEEEETTCCCEEEECTTS
T ss_pred ceEEeEEcCCCCEEEEE---EEECCEE-------EEEEEeCCCccceEeeCCC
Confidence 55666777666777766 6687443 4799999999999997543
No 54
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=61.84 E-value=10 Score=33.79 Aligned_cols=43 Identities=14% Similarity=0.169 Sum_probs=31.7
Q ss_pred cceEEEeccCcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHH
Q 018462 246 GSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVV 298 (355)
Q Consensus 246 g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~ 298 (355)
|.+...|+..+..|.++ |.||.+. ..++||||++.+++|..-.
T Consensus 4 ~~v~~~~~~~~~~Y~~~---i~iG~q~-------~~v~~DTGSs~lWv~~~~C 46 (323)
T 1izd_A 4 GSVTTNPTSNDEEYITQ---VTVGDDT-------LGLDFDTGSADLWVFSSQT 46 (323)
T ss_dssp EEEEEEECGGGCCEEEE---EEETTEE-------EEEEEETTCCCEEECBTTS
T ss_pred CceeeeEcCCCCEEEEE---EEECCEE-------EEEEEcCCCcceEEecCCC
Confidence 56666677666677665 6688443 4799999999999997644
No 55
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=56.02 E-value=13 Score=28.29 Aligned_cols=25 Identities=12% Similarity=0.161 Sum_probs=20.7
Q ss_pred EcCCCcEEEEEEeCCCCceeEeCCCCC
Q 018462 86 IGSPPQSFSVVFDTGSSNLWVPSSKCL 112 (355)
Q Consensus 86 iGtP~q~~~v~~DTGS~~~wv~~~~C~ 112 (355)
||. |.++.++|||-+++.+...+.+
T Consensus 27 i~g--q~~eaLLDTGAD~TVl~~~~lP 51 (124)
T 2rsp_A 27 QRS--VYITALLDSGADITIISEEDWP 51 (124)
T ss_dssp CSE--EEEEEEECTTCSSCEEETTTSC
T ss_pred CCC--EEEEEEecCCCCcEEEecccCC
Confidence 554 8889999999999999876653
No 56
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=55.42 E-value=9.8 Score=27.47 Aligned_cols=33 Identities=24% Similarity=0.277 Sum_probs=23.1
Q ss_pred cceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHH
Q 018462 256 KGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTT 296 (355)
Q Consensus 256 ~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~ 296 (355)
+..|.++ |.||.- .....++||||++.+++|..
T Consensus 12 ~~~Y~~~---i~iGTP-----~Q~~~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 12 DAQYYGE---IGIGTP-----PQCFTVVFDTGSSNLWVPSI 44 (97)
T ss_dssp TTEEEEE---EEETTT-----TEEEEEEEETTCCCEEEEBT
T ss_pred CCeEEEE---EEECCC-----CeEEEEEEeCCCCceEEeEc
Confidence 3456554 668742 22357999999999999865
No 57
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=50.12 E-value=16 Score=30.43 Aligned_cols=29 Identities=24% Similarity=0.279 Sum_probs=24.5
Q ss_pred EEEEEEEcCCCcEEEEEEeCCCCceeEeCCC
Q 018462 80 YYGEIGIGSPPQSFSVVFDTGSSNLWVPSSK 110 (355)
Q Consensus 80 y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~ 110 (355)
-.+.+.||. |.+++++|||.+++.+...+
T Consensus 9 P~vtv~I~G--q~~e~LLDTGAD~TVl~~~~ 37 (203)
T 3ka2_A 9 PLVTIRIGG--QLKEALLDTGADDTVIEELN 37 (203)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEECSCC
T ss_pred CeEEEEECC--EEEEEEEecCCCceEEeccc
Confidence 467799997 99999999999999996543
No 58
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=49.83 E-value=21 Score=31.80 Aligned_cols=44 Identities=16% Similarity=0.052 Sum_probs=29.6
Q ss_pred cceEEE-eccCcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHH
Q 018462 246 GSHIYV-PITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTV 297 (355)
Q Consensus 246 g~l~~~-p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~ 297 (355)
|.+.-. |...+..|.++ |.||.- .....++||||++.+++|..-
T Consensus 3 ~~v~~~~~~~~~~~Y~~~---i~iGTP-----~Q~~~v~~DTGSs~lWv~~~~ 47 (329)
T 1oew_A 3 GSATTTPIDSLDDAYITP---VQIGTP-----AQTLNLDFDTGSSDLWVFSSE 47 (329)
T ss_dssp EEEEEEESSTTCCCEEEE---EEETTT-----TEEEEEEEETTCCCEEECBTT
T ss_pred ceeEeeecCCCCCEEEEE---EEECCC-----CeEEEEEECCCCCCeEEecCC
Confidence 444555 55556667665 678832 222579999999999999653
No 59
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=48.83 E-value=18 Score=32.78 Aligned_cols=44 Identities=18% Similarity=0.166 Sum_probs=30.4
Q ss_pred ccceEEEeccC--cceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHH
Q 018462 245 RGSHIYVPITE--KGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTT 296 (355)
Q Consensus 245 ~g~l~~~p~~~--~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~ 296 (355)
+|.+..+|+.. +..|.++ |.||.- .....++||||++.+++|..
T Consensus 4 ~g~~~~~~l~~~~~~~Y~~~---i~iGtP-----~q~~~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 4 DGSVDTPGLYDFDLEEYAIP---VSIGTP-----GQDFYLLFDTGSSDTWVPHK 49 (361)
T ss_dssp -CCEEEEEEEETTTTEEEEE---EEETTT-----TEEEEEEEETTCCCCEEEBT
T ss_pred CCccceEEeecCCCCEEEEE---EEECCC-----CcEEEEEEcCCCCCeEECCC
Confidence 46667777754 4567665 668842 12247999999999999865
No 60
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=48.39 E-value=23 Score=31.56 Aligned_cols=45 Identities=16% Similarity=0.049 Sum_probs=30.0
Q ss_pred cceEEE-eccCcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHH
Q 018462 246 GSHIYV-PITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVV 298 (355)
Q Consensus 246 g~l~~~-p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~ 298 (355)
|.+.-. |...+..|.++ |.||.- .....++||||++.+++|..-.
T Consensus 3 ~~v~~~~~~~~~~~Y~~~---i~iGTP-----~Q~~~v~~DTGSs~lWv~~~~C 48 (329)
T 3c9x_A 3 GSAPNHPSDSADSEYITS---VSIGTP-----AQVLPLDFDTGSSDLWVFSSET 48 (329)
T ss_dssp EEEEEEESSTTCCCEEEE---EEETTT-----TEEEEEEEETTCCCEEECBTTS
T ss_pred cceeeecCCCCCCEEEEE---EEECCC-----CeEEEEEEcCCCCCeEEecCCC
Confidence 445555 55555667654 678842 2225799999999999997544
No 61
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=45.50 E-value=26 Score=31.15 Aligned_cols=44 Identities=16% Similarity=0.087 Sum_probs=28.4
Q ss_pred cceEEEeccCcceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHH
Q 018462 246 GSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTV 297 (355)
Q Consensus 246 g~l~~~p~~~~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~ 297 (355)
|.+.-.+...+..|.++ |.||.- .....++||||++.+++|..-
T Consensus 4 ~~v~~~~~~~~~~Y~~~---i~iGTP-----~q~~~v~~DTGSs~lWv~~~~ 47 (325)
T 2apr_A 4 GTVPMTDYGNDIEYYGQ---VTIGTP-----GKKFNLDFDTGSSDLWIASTL 47 (325)
T ss_dssp TEEEEEEETTTTEEEEE---EEETTT-----TEEEEEEEETTCCCCEEEBTT
T ss_pred CceeeeecCCCCEEEEE---EEECCC-----CeEEEEEEcCCCCCEEEccCC
Confidence 34444444455667665 668831 122479999999999998643
No 62
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=40.04 E-value=18 Score=32.13 Aligned_cols=43 Identities=23% Similarity=0.322 Sum_probs=28.1
Q ss_pred ceEEEeccC--cceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHH
Q 018462 247 SHIYVPITE--KGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTV 297 (355)
Q Consensus 247 ~l~~~p~~~--~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~ 297 (355)
++...|+.. +..|.++ |.||.- .....++||||++.+++|...
T Consensus 2 ~~~~~~l~n~~~~~Y~~~---i~iGtP-----~q~~~v~~DTGSs~~Wv~~~~ 46 (323)
T 3cms_A 2 EVASVPLTNYLDSQYFGK---IYLGTP-----PQEFTVLFDTGSSDFWVPSIY 46 (323)
T ss_dssp CCEEEEEEEETTTEEEEE---EEETTT-----TEEEEEEEETTCCCEEEEBTT
T ss_pred CcceeeeEeccCCEEEEE---EEECCC-----CeEEEEEEeCCccceEEcCCC
Confidence 344455543 4456665 668742 223579999999999999653
No 63
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=31.04 E-value=61 Score=26.87 Aligned_cols=30 Identities=23% Similarity=0.253 Sum_probs=25.0
Q ss_pred EEEEEEEcCCCcEEEEEEeCCCCceeEeCCCC
Q 018462 80 YYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKC 111 (355)
Q Consensus 80 y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~C 111 (355)
=.+.+.||. |.++.++|||..++.+...+.
T Consensus 113 P~~~iki~G--q~~e~LlDTGAD~TVl~~~~l 142 (203)
T 3ka2_A 113 PLVTIRIGG--QLKEALLDTGADDTVIEELNL 142 (203)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEECSCCC
T ss_pred CcEEEEECC--EEEeeeecccCCceeeecccC
Confidence 357789987 999999999999999965543
No 64
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=29.55 E-value=31 Score=25.27 Aligned_cols=35 Identities=17% Similarity=0.195 Sum_probs=26.0
Q ss_pred eEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHHHHH
Q 018462 259 WQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQ 300 (355)
Q Consensus 259 w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~~~~ 300 (355)
|+=.+-.+.|+|+.. .+++|||.-.+.+.......
T Consensus 6 ~~RP~v~v~I~Gq~~-------e~LLDTGAD~TVl~~~~w~~ 40 (104)
T 1fmb_A 6 EKRPTTIVLINDTPL-------NVLLDTGADTSVLTTAHYNR 40 (104)
T ss_dssp SSCCEEEEEETTEEE-------EEEECTTCSSCEEEHHHHHH
T ss_pred cCCCEEEEEECCEEE-------EEEeccCCCcEEEccccCcc
Confidence 443445588888854 69999999999998766543
No 65
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=29.40 E-value=34 Score=25.62 Aligned_cols=30 Identities=13% Similarity=0.178 Sum_probs=24.9
Q ss_pred eeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCH
Q 018462 258 YWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPT 295 (355)
Q Consensus 258 ~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~ 295 (355)
.|+=.+- +.|+|+.+ .+++|||.-.+.+..
T Consensus 11 l~~rP~v-ikI~Gq~~-------eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 11 EKRPEIL-IFVNGYPI-------KFLLDTGADITVLNR 40 (116)
T ss_dssp SSCCEEE-EEETTEEE-------EEEECTTCSSCEEEG
T ss_pred ccCCCEE-EEECCEEE-------EEEecCCCCcEEEcc
Confidence 4776777 99999865 699999999998875
No 66
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=29.24 E-value=62 Score=27.17 Aligned_cols=39 Identities=21% Similarity=0.216 Sum_probs=26.3
Q ss_pred eEeceecCCceEEE---EEEEcCC-----CcEEEEEEeCCCCceeEeCC
Q 018462 69 VVYLNNYLDAQYYG---EIGIGSP-----PQSFSVVFDTGSSNLWVPSS 109 (355)
Q Consensus 69 ~~~l~~~~~~~y~~---~i~iGtP-----~q~~~v~~DTGS~~~wv~~~ 109 (355)
..|+.. ...|.+ .|.||.- .....+++|||++.+++|..
T Consensus 181 ~~p~~~--~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 181 YVPVTY--QYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp EEEEEE--ETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred EEEccc--CCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 345544 235555 4778762 34578999999999999853
No 67
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=28.57 E-value=29 Score=25.24 Aligned_cols=30 Identities=23% Similarity=0.310 Sum_probs=23.0
Q ss_pred eEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCH
Q 018462 259 WQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPT 295 (355)
Q Consensus 259 w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~ 295 (355)
|+=.+-.+.|+|+.+ .+++|||.-.+.+.+
T Consensus 6 ~~rP~vtvkI~Gq~~-------eaLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 6 WKRPLVTIKIGGQLK-------EALLDTGADDTIIEE 35 (99)
T ss_dssp SSCCEEEEEETTEEE-------EEEECTTCSSEEESC
T ss_pred cCCCEEEEEECCEEE-------EEEeccCCCcEEEec
Confidence 444455688898865 699999999988774
No 68
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=27.59 E-value=65 Score=29.49 Aligned_cols=41 Identities=20% Similarity=0.250 Sum_probs=27.7
Q ss_pred ceeEeceecCCceEEE---EEEEcCCCcEE----------------EEEEeCCCCceeEeCC
Q 018462 67 ADVVYLNNYLDAQYYG---EIGIGSPPQSF----------------SVVFDTGSSNLWVPSS 109 (355)
Q Consensus 67 ~~~~~l~~~~~~~y~~---~i~iGtP~q~~----------------~v~~DTGS~~~wv~~~ 109 (355)
....|+.......|.+ .|+||. +.+ .+++|||++.+.+|..
T Consensus 217 l~~~Pl~~~~~~~y~v~l~~i~v~g--~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~ 276 (403)
T 3aup_A 217 LAFTPLTITLQGEYNVRVNSIRINQ--HSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQS 276 (403)
T ss_dssp EEEEECEECTTSCEEECEEEEEETT--EEEECC------------CCEEECSSCSSEEECHH
T ss_pred eeecccccCCCCcceEEEEEEEECC--EEcccCChhHeeeccCCCCCEEEECCCccEEeCHH
Confidence 3456776543356766 467876 322 1899999999999864
No 69
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=25.50 E-value=45 Score=29.60 Aligned_cols=30 Identities=13% Similarity=0.103 Sum_probs=22.5
Q ss_pred ceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHH
Q 018462 257 GYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTT 296 (355)
Q Consensus 257 ~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~ 296 (355)
..|.++ |.||.+. ..++||||++.+++|..
T Consensus 17 ~~Y~~~---i~iG~Q~-------~~v~~DTGSs~lWv~~~ 46 (330)
T 1yg9_A 17 TQYAGI---TKIGNQN-------FLTVFDSTSCNVVVASQ 46 (330)
T ss_dssp TTSEEE---EEETTEE-------EEEEEETTCCCEEEECT
T ss_pred CEEEEE---EEECCEE-------EEEEEeCCCcceEEecC
Confidence 356655 6688443 47999999999999865
No 70
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=25.05 E-value=79 Score=28.05 Aligned_cols=33 Identities=21% Similarity=0.280 Sum_probs=22.5
Q ss_pred cceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHH
Q 018462 256 KGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTT 296 (355)
Q Consensus 256 ~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~ 296 (355)
...|.++ |.||.- .....++||||++.+++|..
T Consensus 11 ~~~Y~~~---i~iGtP-----~q~~~v~~DTGSs~~Wv~~~ 43 (342)
T 2qzx_A 11 AITYTAD---ITVGSD-----NQKLNVIVDTGSSDLWIPDS 43 (342)
T ss_dssp SSCEEEE---EEETTT-----TEEEEEEEETTCCCEEEEEE
T ss_pred CeEEEEE---EEECCC-----CcEEEEEEeCCCCCeEEecC
Confidence 3456655 667731 22357999999999999843
No 71
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=24.44 E-value=64 Score=28.59 Aligned_cols=33 Identities=18% Similarity=0.227 Sum_probs=22.9
Q ss_pred cceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHH
Q 018462 256 KGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTT 296 (355)
Q Consensus 256 ~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~ 296 (355)
..+|.++ |.||.- .....+++|||++.+++|..
T Consensus 11 ~~~Y~~~---i~iGtP-----~Q~~~v~~DTGSs~~Wv~~~ 43 (339)
T 3fv3_A 11 GPSYASK---VSVGSN-----KQQQTVIIDTGSSDFWVVDS 43 (339)
T ss_dssp SSSEEEE---EEETTT-----TEEEEEEEETTCCCEEEEEE
T ss_pred CCEEEEE---EEEcCC-----CcEEEEEEeCCCCceEEecC
Confidence 3456665 668742 22357999999999999843
No 72
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=23.72 E-value=55 Score=29.05 Aligned_cols=33 Identities=21% Similarity=0.311 Sum_probs=22.8
Q ss_pred cceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHH
Q 018462 256 KGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTT 296 (355)
Q Consensus 256 ~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~ 296 (355)
..+|.++ |.||.- .....+++|||++.+++|..
T Consensus 11 ~~~Y~~~---i~iGtP-----~q~~~v~~DTGSs~~Wv~~~ 43 (342)
T 3pvk_A 11 QVTYAAD---ITVGSN-----NQKLNVIVDTGSSDLWVPDV 43 (342)
T ss_dssp SSSEEEE---EEETTT-----TEEEEEEEETTCCCEEEEEE
T ss_pred CcEEEEE---EEEcCC-----CcEEEEEEECCCcceEEEcC
Confidence 3456665 668742 22357999999999999853
No 73
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=23.19 E-value=63 Score=28.46 Aligned_cols=34 Identities=21% Similarity=0.195 Sum_probs=23.6
Q ss_pred cceeEEEEeeEEEcCeEeEeecCCeeEEEccCccCcccCHHH
Q 018462 256 KGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTV 297 (355)
Q Consensus 256 ~~~w~v~~~~i~vg~~~~~~~~~~~~aiiDTGt~~i~lP~~~ 297 (355)
+..|.++ |.||.- .....+++|||++.+++|...
T Consensus 11 ~~~Y~~~---i~iGtP-----~q~~~v~~DTGSs~~Wv~~~~ 44 (324)
T 1am5_A 11 DTEYYGV---ISIGTP-----PESFKVIFDTGSSNLWVSSSH 44 (324)
T ss_dssp TTEEEEE---EEETTT-----TEEEEEEEETTCCCEEECBTT
T ss_pred CCEEEEE---EEECCC-----CeEEEEEEeCCCcceEEecCC
Confidence 3456555 567742 223579999999999999653
No 74
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=23.11 E-value=73 Score=26.57 Aligned_cols=28 Identities=21% Similarity=0.383 Sum_probs=21.6
Q ss_pred EEEEcCC----CcEEEEEEeCCCCceeEeCCC
Q 018462 83 EIGIGSP----PQSFSVVFDTGSSNLWVPSSK 110 (355)
Q Consensus 83 ~i~iGtP----~q~~~v~~DTGS~~~wv~~~~ 110 (355)
.|+||.- .....+++|||++.+++|...
T Consensus 107 ~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~ 138 (241)
T 1lya_B 107 QVEVASGLTLCKEGCEAIVDTGTSLMVGPVDE 138 (241)
T ss_dssp EEEETTSCEESTTCEEEEECTTCSSEEECHHH
T ss_pred EEEECCeeEeccCCCEEEEECCCccccCCHHH
Confidence 5778763 245789999999999998643
Done!