Your job contains 1 sequence.
>018463
MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSHP
TPQQVATNTQPQPQPQPQQLPPKDHFTLQHHPQFSLPPQQFPPHFALHHPHPHLPQFPQE
LNFSQPQPSQAAAPPPQPHSNVSKAEAFPQISAEVAKENPPVGAKRRGGPGGLNKVCGVS
PELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMN
KLLAKHIIPLEPTKESSKRFKPDAESTTEGMESGPSSVIISEALAKFLGTGGREMLQAEA
TKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHFLRQS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018463
(355 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2132055 - symbol:AT4G22360 "AT4G22360" species... 726 4.3e-92 2
TAIR|locus:2085894 - symbol:AT3G19080 species:3702 "Arabi... 407 1.2e-47 2
TAIR|locus:2010197 - symbol:AT1G49520 "AT1G49520" species... 283 1.1e-33 2
UNIPROTKB|G4MMD0 - symbol:MGG_01988 "Uncharacterized prot... 224 1.4e-18 1
TAIR|locus:2116189 - symbol:AT4G34290 "AT4G34290" species... 196 1.3e-15 1
SGD|S000004846 - symbol:TRI1 "Non-essential sumoylated pr... 188 8.8e-15 1
POMBASE|SPCC285.17 - symbol:spp27 "RNA polymerase I upstr... 188 8.8e-15 1
TAIR|locus:2060469 - symbol:AT2G14880 "AT2G14880" species... 188 8.8e-15 1
SGD|S000005821 - symbol:UAF30 "Subunit of UAF (upstream a... 183 3.2e-14 1
TAIR|locus:505006294 - symbol:AT2G35605 "AT2G35605" speci... 177 1.7e-13 1
ASPGD|ASPL0000053508 - symbol:AN0360 species:162425 "Emer... 187 2.6e-13 1
TAIR|locus:2096404 - symbol:AT3G03590 "AT3G03590" species... 173 5.1e-13 1
WB|WBGene00020779 - symbol:T24G10.2 species:6239 "Caenorh... 182 4.4e-12 1
FB|FBgn0035370 - symbol:CG1240 species:7227 "Drosophila m... 162 2.4e-10 1
TAIR|locus:2028671 - symbol:AT1G31760 "AT1G31760" species... 144 1.1e-09 1
TAIR|locus:2116302 - symbol:AT4G26810 "AT4G26810" species... 131 3.1e-08 1
ASPGD|ASPL0000017588 - symbol:AN10524 species:162425 "Eme... 117 0.00029 3
POMBASE|SPAC23G3.10c - symbol:ssr3 "SWI/SNF and RSC compl... 115 0.00050 1
UNIPROTKB|H9KZE0 - symbol:SMARCD1 "Uncharacterized protei... 115 0.00067 1
UNIPROTKB|F1MTG9 - symbol:SMARCD1 "SWI/SNF-related matrix... 114 0.00086 1
UNIPROTKB|Q2TBN1 - symbol:SMARCD1 "SWI/SNF-related matrix... 114 0.00086 1
UNIPROTKB|Q96GM5 - symbol:SMARCD1 "SWI/SNF-related matrix... 114 0.00086 1
RGD|1305406 - symbol:Smarcd1 "SWI/SNF related, matrix ass... 114 0.00086 1
>TAIR|locus:2132055 [details] [associations]
symbol:AT4G22360 "AT4G22360" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003121 InterPro:IPR009057 Pfam:PF02201
EMBL:CP002687 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF47592
InterPro:IPR014876 Pfam:PF08766 InterPro:IPR019835 SMART:SM00151
KO:K15223 UniGene:At.21353 UniGene:At.70102 EMBL:AY059797
EMBL:AY091266 IPI:IPI00522192 RefSeq:NP_567661.1
ProteinModelPortal:Q93YR5 SMR:Q93YR5 PRIDE:Q93YR5
EnsemblPlants:AT4G22360.1 GeneID:828331 KEGG:ath:AT4G22360
InParanoid:Q93YR5 OMA:IRDQINI ProtClustDB:CLSN2723299
Genevestigator:Q93YR5 Uniprot:Q93YR5
Length = 385
Score = 726 (260.6 bits), Expect = 4.3e-92, Sum P(2) = 4.3e-92
Identities = 143/209 (68%), Positives = 168/209 (80%)
Query: 154 EVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDP 213
+ KE+ P G KR+GGPGGLNKVC VSPEL+ VVG+PA+PRTEIV+QLWAYIRKNNLQDP
Sbjct: 178 QAPKESAPAGTKRKGGPGGLNKVCRVSPELEVVVGEPALPRTEIVRQLWAYIRKNNLQDP 237
Query: 214 SNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKES--SKRFKPDAES---TT 268
SNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI+PL+P+K+S +K+ K + E+ TT
Sbjct: 238 SNKRKIICDDALRVVFETDCTDMFKMNKLLAKHILPLDPSKDSGQAKKAKTEVETKTETT 297
Query: 269 EGMESGP--SSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDA 326
E + S S+V +SE L KF GTG EM E +RVWEYIK+N+LEDP+N M I CD
Sbjct: 298 EPISSTAISSTVTLSEPLGKFFGTGETEMADEEIIRRVWEYIKLNNLEDPVNPMAIQCDE 357
Query: 327 KLRELLGCESISALGIQEMLARNHFLRQS 355
KLR+LLGCESISA+GI EML R H +QS
Sbjct: 358 KLRDLLGCESISAVGINEML-RRHMYKQS 385
Score = 211 (79.3 bits), Expect = 4.3e-92, Sum P(2) = 4.3e-92
Identities = 42/59 (71%), Positives = 53/59 (89%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSH 59
MVSDQ++AKGVETLLRQSD ++ TSL+ +V+QLEAKLGLDL+ K FIRDQI++LLR+H
Sbjct: 1 MVSDQDLAKGVETLLRQSDPSSLTSLSSIVQQLEAKLGLDLTEKTTFIRDQINILLRAH 59
>TAIR|locus:2085894 [details] [associations]
symbol:AT3G19080 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR003121 InterPro:IPR009057 Pfam:PF02201
GO:GO:0009506 EMBL:CP002686 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF47592 InterPro:IPR014876 Pfam:PF08766 InterPro:IPR019835
SMART:SM00151 KO:K15223 IPI:IPI00544253 RefSeq:NP_188538.1
UniGene:At.53383 ProteinModelPortal:F4J9Z9 SMR:F4J9Z9 PRIDE:F4J9Z9
EnsemblPlants:AT3G19080.1 GeneID:821442 KEGG:ath:AT3G19080
OMA:PLEDNAG Uniprot:F4J9Z9
Length = 462
Score = 407 (148.3 bits), Expect = 1.2e-47, Sum P(2) = 1.2e-47
Identities = 88/205 (42%), Positives = 124/205 (60%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
KR+GG GG KVC +SPELQA G + RTE+VK LW YI++NNLQDP++KR IICD++
Sbjct: 257 KRKGG-GGFAKVCSLSPELQAFTGVTELARTEVVKLLWKYIKENNLQDPNDKRSIICDES 315
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPLEP------TKESSKRFKP------DAESTTEGME 272
R +F + +MF+MNK L KHI PLE + +S K K D+E E +
Sbjct: 316 FRSLFPVESINMFQMNKQLTKHIWPLEDNAGESVSSKSPKNGKQKMESDGDSEEPNEKDK 375
Query: 273 SGPSSVI----ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKL 328
V+ +S+AL KFLG G + +A+ KR+WEYI N L+DP + ++CD KL
Sbjct: 376 KQKKEVLAPLPLSDALVKFLGDGENSLSRADVVKRLWEYINHNDLQDPSDKRRVICDEKL 435
Query: 329 RELLGCESISALGIQEMLARNHFLR 353
+EL +S + ++L NHF++
Sbjct: 436 KELFEVDSFEDTSVSKLLT-NHFIK 459
Score = 272 (100.8 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 58/132 (43%), Positives = 82/132 (62%)
Query: 153 AEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQD 212
+E KE PV AK+RGG G+ KV +SP+L+ VVG + RTE+VK++WAYIR+ +LQD
Sbjct: 98 SEEEKEERPVKAKKRGG--GITKVSQLSPQLEKVVGASQLGRTEVVKKMWAYIREKDLQD 155
Query: 213 PSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKESSKRFKP-DAESTTEGM 271
P ++RKI+CD+ L +F +MF+MNK L KHI PL + K D + +EG
Sbjct: 156 PKDRRKIVCDELLHSLFRVKTINMFQMNKALTKHIWPLGDGDGCANDVKEEDEDEASEGT 215
Query: 272 ES-GPSSVIISE 282
+ G S + E
Sbjct: 216 DKKGEQSEEVEE 227
Score = 167 (63.8 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 29/64 (45%), Positives = 45/64 (70%)
Query: 188 GQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
G+ ++ R ++VK+LW YI N+LQDPS+KR++ICD+ L+ +FE D + ++KLL H
Sbjct: 398 GENSLSRADVVKRLWEYINHNDLQDPSDKRRVICDEKLKELFEVDSFEDTSVSKLLTNHF 457
Query: 248 IPLE 251
I E
Sbjct: 458 IKAE 461
Score = 108 (43.1 bits), Expect = 1.2e-47, Sum P(2) = 1.2e-47
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSH 59
MVSD ++ + +L SD N +T + V +QLEA G+DL+ K +IRDQI L S+
Sbjct: 1 MVSDLDLVTRLREILGSSDLNTATPAS-VRRQLEADFGVDLTDKKAYIRDQIDTFLESN 58
Score = 89 (36.4 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 19/70 (27%), Positives = 37/70 (52%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S L K +G ++ + E K++W YI+ L+DP + I+CD L L ++I+
Sbjct: 122 LSPQLEKVVGAS--QLGRTEVVKKMWAYIREKDLQDPKDRRKIVCDELLHSLFRVKTINM 179
Query: 340 LGIQEMLARN 349
+ + L ++
Sbjct: 180 FQMNKALTKH 189
>TAIR|locus:2010197 [details] [associations]
symbol:AT1G49520 "AT1G49520" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003121 InterPro:IPR009057 Pfam:PF02201
EMBL:CP002684 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF47592
InterPro:IPR014876 Pfam:PF08766 eggNOG:COG5531 InterPro:IPR019835
SMART:SM00151 KO:K15223 EMBL:BT022048 IPI:IPI00546116
RefSeq:NP_175375.2 UniGene:At.49961 ProteinModelPortal:Q501B9
SMR:Q501B9 PRIDE:Q501B9 EnsemblPlants:AT1G49520.1 GeneID:841376
KEGG:ath:AT1G49520 TAIR:At1g49520 InParanoid:Q501B9 OMA:RTIICDE
PhylomeDB:Q501B9 ProtClustDB:CLSN2684550 Genevestigator:Q501B9
Uniprot:Q501B9
Length = 372
Score = 283 (104.7 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 56/109 (51%), Positives = 73/109 (66%)
Query: 165 KRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDA 224
K++GG G KVC +SPELQA G P + RTE+VK LW YI++NNLQDPS+KR IICD++
Sbjct: 245 KKKGG--GFTKVCSLSPELQAFTGTPQLARTEVVKMLWKYIKENNLQDPSDKRTIICDES 302
Query: 225 LRVVFETDCTDMFKMNKLLAKHIIPLEPTKESSKRFKPDAESTTEGMES 273
LR +F + +MF+MNK LAKHI PL E+ P+ ME+
Sbjct: 303 LRSLFPVESINMFQMNKQLAKHIWPLVQEDEAGTTNDPEKGKQKMKMET 351
Score = 278 (102.9 bits), Expect = 3.8e-33, Sum P(2) = 3.8e-33
Identities = 58/128 (45%), Positives = 80/128 (62%)
Query: 157 KENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
K PV AK+RGG G NK+C +SP+L+ +G + RTE+VK++WAYIR+++LQDP+N+
Sbjct: 88 KTELPVKAKKRGG--GFNKICQLSPQLEKFLGTSQLARTEVVKKMWAYIREHDLQDPTNR 145
Query: 217 RKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKESSKRFKPDAESTTEGMESGPS 276
R I+CD++L +F +MF+MNK LAKHI L K K + T G E
Sbjct: 146 RNILCDESLHSLFRVKTINMFQMNKALAKHIWALNDGDGCFKNVKEEDVDETSG-ERDEK 204
Query: 277 SVIISEAL 284
V I EAL
Sbjct: 205 DVKIEEAL 212
Score = 134 (52.2 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 33/98 (33%), Positives = 52/98 (53%)
Query: 254 KESSKRFKP-DAESTTEGMESGPSSVI-ISEALAKFLGTGGREMLQAEATKRVWEYIKVN 311
K K+ KP +E + G + V +S L F GT ++ + E K +W+YIK N
Sbjct: 229 KRKRKKRKPAKSEEKPKKKGGGFTKVCSLSPELQAFTGTP--QLARTEVVKMLWKYIKEN 286
Query: 312 HLEDPLNSMVILCDAKLRELLGCESISALGIQEMLARN 349
+L+DP + I+CD LR L ESI+ + + LA++
Sbjct: 287 NLQDPSDKRTIICDESLRSLFPVESINMFQMNKQLAKH 324
Score = 122 (48.0 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISA 339
+S L KFLGT ++ + E K++W YI+ + L+DP N ILCD L L ++I+
Sbjct: 108 LSPQLEKFLGTS--QLARTEVVKKMWAYIREHDLQDPTNRRNILCDESLHSLFRVKTINM 165
Query: 340 LGIQEMLARN 349
+ + LA++
Sbjct: 166 FQMNKALAKH 175
Score = 99 (39.9 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 1 MVSDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRS 58
MVSD ++ + +LR SD +T + V +QLE G++L+ K F+R+QI L S
Sbjct: 1 MVSDSDLVTQLREILRSSDLETTTPAS-VRRQLEVYFGVELTDKKAFVREQIDAFLES 57
>UNIPROTKB|G4MMD0 [details] [associations]
symbol:MGG_01988 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003121 InterPro:IPR009057 Pfam:PF02201 GO:GO:0003677
Gene3D:1.10.10.60 EMBL:CM001231 SUPFAM:SSF47592 InterPro:IPR014876
Pfam:PF08766 InterPro:IPR019835 SMART:SM00151 KO:K15223
RefSeq:XP_003708728.1 ProteinModelPortal:G4MMD0
EnsemblFungi:MGG_01988T0 GeneID:2681107 KEGG:mgr:MGG_01988
Uniprot:G4MMD0
Length = 285
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 40/110 (36%), Positives = 72/110 (65%)
Query: 142 VSKAEAFPQISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQL 201
V+K ++ +++A+ ++ G ++R GG K +S L V G+P + R ++VK+L
Sbjct: 174 VTKKKSKAKVAADDDEDLSGDGTQKRKAGGGFQKPFHLSASLAEVCGEPTLSRPQVVKKL 233
Query: 202 WAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLE 251
W +I+ NNLQDP++KR+I+CD+ ++ VF+ +MF MNKL+ H+ P++
Sbjct: 234 WEHIKGNNLQDPNDKRQILCDEKMQAVFKQSSLNMFAMNKLIGSHLYPVD 283
>TAIR|locus:2116189 [details] [associations]
symbol:AT4G34290 "AT4G34290" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003121 Pfam:PF02201 EMBL:CP002687
EMBL:AL035521 EMBL:AL161585 SUPFAM:SSF47592 InterPro:IPR019835
SMART:SM00151 ProtClustDB:CLSN2685737 EMBL:BT001198 IPI:IPI00535550
PIR:T04775 RefSeq:NP_195155.1 UniGene:At.2612
ProteinModelPortal:Q9SYZ4 SMR:Q9SYZ4 STRING:Q9SYZ4 PRIDE:Q9SYZ4
EnsemblPlants:AT4G34290.1 GeneID:829579 KEGG:ath:AT4G34290
TAIR:At4g34290 InParanoid:Q9SYZ4 OMA:REPRGIM PhylomeDB:Q9SYZ4
Genevestigator:Q9SYZ4 Uniprot:Q9SYZ4
Length = 144
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 40/98 (40%), Positives = 61/98 (62%)
Query: 152 SAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQ 211
SA A +P K R P G+ K VS +Q VVG P +PRT+ +K++WAYI++++LQ
Sbjct: 48 SAAAASSDPTTTTKTRE-PRGIMKPRPVSQAMQDVVGVPEIPRTQALKRIWAYIKEHDLQ 106
Query: 212 DPSNKRKIICDDALRVVFE-TDCTDMFKMNKLLAKHII 248
DP NKR I+CD+ L+ +FE + ++ KL+ H +
Sbjct: 107 DPQNKRDILCDEKLKKIFEGKERVGFLEIAKLIGPHFL 144
Score = 125 (49.1 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 33/95 (34%), Positives = 54/95 (56%)
Query: 263 DAESTTEGMESGPSSVI----ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLN 318
D +TT+ E P ++ +S+A+ +G E+ + +A KR+W YIK + L+DP N
Sbjct: 55 DPTTTTKTRE--PRGIMKPRPVSQAMQDVVGVP--EIPRTQALKRIWAYIKEHDLQDPQN 110
Query: 319 SMVILCDAKLRELL-GCESISALGIQEMLARNHFL 352
ILCD KL+++ G E + L I +++ HFL
Sbjct: 111 KRDILCDEKLKKIFEGKERVGFLEIAKLIGP-HFL 144
>SGD|S000004846 [details] [associations]
symbol:TRI1 "Non-essential sumoylated protein of unknown
function" species:4932 "Saccharomyces cerevisiae" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005730 "nucleolus" evidence=IEA;IDA]
InterPro:IPR003121 InterPro:IPR009057 Pfam:PF02201 SGD:S000004846
GO:GO:0005737 GO:GO:0005730 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.10.60 EMBL:BK006946 EMBL:Z49939
SUPFAM:SSF47592 InterPro:IPR014876 Pfam:PF08766 eggNOG:COG5531
InterPro:IPR019835 SMART:SM00151 EMBL:AY557975 PIR:S57600
RefSeq:NP_013960.1 ProteinModelPortal:Q05024 SMR:Q05024
DIP:DIP-1551N IntAct:Q05024 MINT:MINT-386791 STRING:Q05024
PaxDb:Q05024 PeptideAtlas:Q05024 EnsemblFungi:YMR233W GeneID:855273
KEGG:sce:YMR233W CYGD:YMR233w GeneTree:ENSGT00390000006048
HOGENOM:HOG000000765 KO:K15223 OMA:DRREILC OrthoDB:EOG486CP2
NextBio:978891 Genevestigator:Q05024 GermOnline:YMR233W
Uniprot:Q05024
Length = 226
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 40/100 (40%), Positives = 63/100 (63%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S LQ +G +PRT++VK +W YI++++LQ+P ++R+I+CD+ + +F T MF
Sbjct: 126 LSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFGKKMT-MFS 184
Query: 239 MNKLLAKHII-PLEPTK-ESSKRFKPDAESTTEGMESGPS 276
MNKLL KH+ P E K E ++ P+ E E ES P+
Sbjct: 185 MNKLLTKHLFNPDEIVKHEEEQKQTPEKEIKLEN-ESLPN 223
Score = 123 (48.4 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 29/99 (29%), Positives = 54/99 (54%)
Query: 253 TKESSKRFKPDAESTTEGMESGPSSVIISEALAKFLGTGGREMLQAEATKRVWEYIKVNH 312
++ SKR K +S S V++S L KFLG+ E+ + + K +W+YIK +
Sbjct: 100 SESKSKRKKKKNDSPDSNSIS-VRKVLLSAPLQKFLGS--EELPRTQVVKMIWQYIKEHD 156
Query: 313 LEDPLNSMVILCDAKLRELLGCESISALGIQEMLARNHF 351
L++P + ILCD K+ + G + ++ + ++L ++ F
Sbjct: 157 LQNPKDRREILCDEKMEPIFG-KKMTMFSMNKLLTKHLF 194
>POMBASE|SPCC285.17 [details] [associations]
symbol:spp27 "RNA polymerase I upstream activation factor
complex subunit Spp27" species:4896 "Schizosaccharomyces pombe"
[GO:0000500 "RNA polymerase I upstream activating factor complex"
evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045943 "positive
regulation of transcription from RNA polymerase I promoter"
evidence=TAS] [GO:0001168 "RNA polymerase I upstream control
element sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR003121 InterPro:IPR009057
Pfam:PF02201 PomBase:SPCC285.17 GO:GO:0005829 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF47592 GO:GO:0045943 InterPro:IPR014876
Pfam:PF08766 GO:GO:0000500 eggNOG:COG5531 InterPro:IPR019835
SMART:SM00151 HSSP:Q61466 KO:K15223 OMA:DRREILC OrthoDB:EOG486CP2
PIR:T41263 RefSeq:NP_588345.1 ProteinModelPortal:O74503
STRING:O74503 PRIDE:O74503 EnsemblFungi:SPCC285.17.1 GeneID:2539310
KEGG:spo:SPCC285.17 NextBio:20800476 Uniprot:O74503
Length = 233
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 41/91 (45%), Positives = 56/91 (61%)
Query: 157 KENPPVGAKRRGG--PGG--LNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQD 212
KE+ G KR+ P LNK +SP+L +G + R + VK+LW YI+ ++LQD
Sbjct: 97 KEDGEEGGKRKRNQDPANNPLNKPMKLSPKLAEFLGLEQLSRPQTVKKLWEYIKAHDLQD 156
Query: 213 PSNKRKIICDDALRVVFETDCTDMFKMNKLL 243
P++KR I+CDD L+ VFE D MF MNK L
Sbjct: 157 PNDKRTILCDDKLKSVFEVDTLHMFTMNKYL 187
Score = 117 (46.2 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 28/102 (27%), Positives = 52/102 (50%)
Query: 251 EPTKESSKRFKPDAESTTEGMESGPSS------VIISEALAKFLGTGGREMLQAEATKRV 304
+P K + KR + E P++ + +S LA+FLG ++ + + K++
Sbjct: 88 KPAKRTRKRKEDGEEGGKRKRNQDPANNPLNKPMKLSPKLAEFLGL--EQLSRPQTVKKL 145
Query: 305 WEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEML 346
WEYIK + L+DP + ILCD KL+ + +++ + + L
Sbjct: 146 WEYIKAHDLQDPNDKRTILCDDKLKSVFEVDTLHMFTMNKYL 187
>TAIR|locus:2060469 [details] [associations]
symbol:AT2G14880 "AT2G14880" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003121 Pfam:PF02201 EMBL:AC005396
EMBL:CP002685 GenomeReviews:CT485783_GR SUPFAM:SSF47592
eggNOG:COG5531 InterPro:IPR019835 SMART:SM00151 EMBL:AF370580
IPI:IPI00517159 PIR:E84522 RefSeq:NP_565366.1 UniGene:At.13059
ProteinModelPortal:O82326 SMR:O82326 STRING:O82326 PaxDb:O82326
PRIDE:O82326 EnsemblPlants:AT2G14880.1 GeneID:815977
KEGG:ath:AT2G14880 TAIR:At2g14880 HOGENOM:HOG000225318
InParanoid:O82326 OMA:QDIVELP PhylomeDB:O82326
ProtClustDB:CLSN2685737 Genevestigator:O82326 Uniprot:O82326
Length = 141
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 36/93 (38%), Positives = 60/93 (64%)
Query: 157 KENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNK 216
+ + P +R P G+ K VSPE+Q +V P + RT+ +K++WAYI++++LQDP NK
Sbjct: 50 ESSEPTATNKRV-PRGIMKPRPVSPEMQDIVELPEIARTQALKRIWAYIKEHDLQDPQNK 108
Query: 217 RKIICDDALRVVFE-TDCTDMFKMNKLLAKHII 248
R+I+CD+ L+ +FE D ++ KL+ H +
Sbjct: 109 REILCDEKLKKIFEGRDRVGFLEIAKLIGPHFL 141
Score = 117 (46.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 294 EMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESISALGIQEMLARNHFL 352
E+ + +A KR+W YIK + L+DP N ILCD KL+++ G + + L I +++ HFL
Sbjct: 83 EIARTQALKRIWAYIKEHDLQDPQNKREILCDEKLKKIFEGRDRVGFLEIAKLIGP-HFL 141
>SGD|S000005821 [details] [associations]
symbol:UAF30 "Subunit of UAF (upstream activation factor)"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0042790 "transcription of nuclear large rRNA
transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001168
"RNA polymerase I upstream control element sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:0001165
"RNA polymerase I upstream control element sequence-specific DNA
binding" evidence=IDA] [GO:0006325 "chromatin organization"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0000500 "RNA
polymerase I upstream activating factor complex" evidence=IDA]
InterPro:IPR003121 InterPro:IPR009057 Pfam:PF02201 SGD:S000005821
EMBL:BK006948 GO:GO:0006355 Gene3D:1.10.10.60 GO:GO:0006325
SUPFAM:SSF47592 InterPro:IPR014876 Pfam:PF08766 GO:GO:0042790
GO:GO:0000500 GO:GO:0001165 eggNOG:COG5531 InterPro:IPR019835
SMART:SM00151 RefSeq:NP_014940.4 GeneID:854472 KEGG:sce:YOR297C
GeneTree:ENSGT00390000006048 HOGENOM:HOG000000765 KO:K15223
OrthoDB:EOG486CP2 EMBL:Z75203 PIR:S67199 RefSeq:NP_014938.3
ProteinModelPortal:Q08747 SMR:Q08747 IntAct:Q08747 STRING:Q08747
EnsemblFungi:YOR295W GeneID:854470 KEGG:sce:YOR295W CYGD:YOR295w
OMA:EDNENDT NextBio:976765 Genevestigator:Q08747 GermOnline:YOR295W
Uniprot:Q08747
Length = 228
Score = 183 (69.5 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 37/87 (42%), Positives = 61/87 (70%)
Query: 170 PGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 229
P KV +S L +++G+ + RTE+V++LWAYI+ +NLQ+P+NK++I+CD+ L ++
Sbjct: 118 PISTRKVT-LSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELIL 176
Query: 230 ETDCTDMFKMNKLLAKHIIPLEPTKES 256
T+MF+M+K+LA H+ EP K S
Sbjct: 177 GKS-TNMFEMHKILASHMT--EPKKIS 200
Score = 141 (54.7 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 43/130 (33%), Positives = 67/130 (51%)
Query: 229 FETDCTDMFKMNKLLAKHIIP-LEPTKESSKRFKPDAESTTEGMES-------GPSS--- 277
FE D+ K N LA + + +K SS K D+E+ +E P S
Sbjct: 64 FERSLEDLLKENATLAIELTKEITVSKRSSGEEKNDSETKGTHVEKKKGTVSKSPISTRK 123
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESI 337
V +S++LA LG E+ + E +R+W YIK ++L++P N ILCD KL +LG +S
Sbjct: 124 VTLSKSLASLLGE--HELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILG-KST 180
Query: 338 SALGIQEMLA 347
+ + ++LA
Sbjct: 181 NMFEMHKILA 190
>TAIR|locus:505006294 [details] [associations]
symbol:AT2G35605 "AT2G35605" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003121 Pfam:PF02201 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC006068 EMBL:AC005314
SUPFAM:SSF47592 eggNOG:COG5531 InterPro:IPR019835 SMART:SM00151
HOGENOM:HOG000225318 EMBL:AF370234 EMBL:AY059124 EMBL:AY088833
EMBL:AK118403 IPI:IPI00544861 RefSeq:NP_565810.1 UniGene:At.19064
ProteinModelPortal:Q93W30 SMR:Q93W30 STRING:Q93W30 PaxDb:Q93W30
PRIDE:Q93W30 EnsemblPlants:AT2G35605.1 GeneID:818127
KEGG:ath:AT2G35605 TAIR:At2g35605 InParanoid:Q93W30 OMA:AVKKIWE
PhylomeDB:Q93W30 ProtClustDB:CLSN2688164 ArrayExpress:Q93W30
Genevestigator:Q93W30 Uniprot:Q93W30
Length = 109
Score = 177 (67.4 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 39/94 (41%), Positives = 58/94 (61%)
Query: 155 VAKENPPVGAKRRGGPG-GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDP 213
+AK GAK G G G+ KV VS L +G+ + RT VK++W YI+ NNLQ+P
Sbjct: 12 MAKAASSTGAKT-GRQGTGILKVVPVSKPLANFIGENEVSRTTAVKKIWEYIKLNNLQNP 70
Query: 214 SNKRKIICDDALRVVFE-TDCTDMFKMNKLLAKH 246
NKR+I+CD+ L+ +F D +++KLL++H
Sbjct: 71 VNKREILCDEQLKTIFSGKDTVGFLEISKLLSQH 104
Score = 142 (55.0 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 29/75 (38%), Positives = 51/75 (68%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCES 336
V +S+ LA F+G E+ + A K++WEYIK+N+L++P+N ILCD +L+ + G ++
Sbjct: 34 VPVSKPLANFIGEN--EVSRTTAVKKIWEYIKLNNLQNPVNKREILCDEQLKTIFSGKDT 91
Query: 337 ISALGIQEMLARNHF 351
+ L I ++L++ HF
Sbjct: 92 VGFLEISKLLSQ-HF 105
>ASPGD|ASPL0000053508 [details] [associations]
symbol:AN0360 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR003121
InterPro:IPR009057 Pfam:PF02201 EMBL:BN001308 GO:GO:0003677
Gene3D:1.10.10.60 EMBL:AACD01000006 SUPFAM:SSF47592
InterPro:IPR014876 Pfam:PF08766 eggNOG:COG5531 InterPro:IPR019835
SMART:SM00151 KO:K15223 OrthoDB:EOG486CP2 RefSeq:XP_657964.1
ProteinModelPortal:Q5BGH0 EnsemblFungi:CADANIAT00002344
GeneID:2876138 KEGG:ani:AN0360.2 HOGENOM:HOG000213060 OMA:FRTFGML
Uniprot:Q5BGH0
Length = 279
Score = 187 (70.9 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 41/113 (36%), Positives = 71/113 (62%)
Query: 142 VSKAEAFPQISAEV-AKENPPVGAKRRGGP-----GGLNKVCGVSPELQAVVGQPA-MPR 194
V K ++ + + +V A+++ +G+ G GG +K +SP L A++G A + R
Sbjct: 162 VKKKKSTAKTAKKVKAEDDSDIGSGSESGKKVNRSGGFHKPLNLSPALSALLGGAATLSR 221
Query: 195 TEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHI 247
+ VK+LW YI +++LQDPS++R+I CDD +R VF+ D MF M K+L++++
Sbjct: 222 PQTVKKLWEYIHEHDLQDPSDRRQIRCDDPMRAVFKQDRIHMFTMTKILSQNL 274
>TAIR|locus:2096404 [details] [associations]
symbol:AT3G03590 "AT3G03590" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0006661 "phosphatidylinositol biosynthetic
process" evidence=RCA] InterPro:IPR003121 Pfam:PF02201
EMBL:CP002686 EMBL:AC009327 SUPFAM:SSF47592 InterPro:IPR019835
SMART:SM00151 EMBL:BT003701 EMBL:AK117771 IPI:IPI00546282
RefSeq:NP_566210.1 UniGene:At.40956 ProteinModelPortal:Q9SS61
SMR:Q9SS61 PRIDE:Q9SS61 EnsemblPlants:AT3G03590.1 GeneID:821215
KEGG:ath:AT3G03590 TAIR:At3g03590 InParanoid:Q9SS61 OMA:REIFCDE
PhylomeDB:Q9SS61 ProtClustDB:CLSN2917083 Genevestigator:Q9SS61
Uniprot:Q9SS61
Length = 143
Score = 173 (66.0 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 39/106 (36%), Positives = 64/106 (60%)
Query: 144 KAEAFPQISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWA 203
KA+A P+ A K + P AK+ G+ KV VSP L +G RT+ +K +W
Sbjct: 40 KAKAKPKPKA---KSDSP--AKKTPRSTGIFKVTPVSPVLAQFLGTGETSRTDAIKGIWT 94
Query: 204 YIRKNNLQDPSNKRKIICDDALRVVFE-TDCTDMFKMNKLLAKHII 248
YI+ ++LQ+P++KR+I CD+ L+++FE D +++KLL+ H +
Sbjct: 95 YIKSHDLQNPADKREIFCDETLKLIFEGKDKVGFLEISKLLSPHFV 140
Score = 126 (49.4 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 36/111 (32%), Positives = 60/111 (54%)
Query: 249 PLEPTKESSKRFKPDAESTTEGMESGPSSVI-----ISEALAKFLGTGGREMLQAEATKR 303
P K +K KP A+S + ++ S+ I +S LA+FLGTG E + +A K
Sbjct: 35 PAAKPKAKAKP-KPKAKSDSPAKKTPRSTGIFKVTPVSPVLAQFLGTG--ETSRTDAIKG 91
Query: 304 VWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESISALGIQEMLARNHFLR 353
+W YIK + L++P + I CD L+ + G + + L I ++L+ HF++
Sbjct: 92 IWTYIKSHDLQNPADKREIFCDETLKLIFEGKDKVGFLEISKLLSP-HFVK 141
>WB|WBGene00020779 [details] [associations]
symbol:T24G10.2 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR003121 Pfam:PF02201 GO:GO:0005634 GO:GO:0009792
GO:GO:0006351 GO:GO:0008134 SUPFAM:SSF47592 InterPro:IPR014876
Pfam:PF08766 eggNOG:COG5531 InterPro:IPR019835 SMART:SM00151
KO:K15223 EMBL:FO081422 PIR:T16937 RefSeq:NP_498159.2
ProteinModelPortal:Q22749 SMR:Q22749 STRING:Q22749 PaxDb:Q22749
EnsemblMetazoa:T24G10.2 GeneID:175747 KEGG:cel:CELE_T24G10.2
UCSC:T24G10.2 CTD:175747 WormBase:T24G10.2
GeneTree:ENSGT00520000059577 HOGENOM:HOG000017704 InParanoid:Q22749
OMA:TKLCYIS NextBio:889470 Uniprot:Q22749
Length = 347
Score = 182 (69.1 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 45/126 (35%), Positives = 66/126 (52%)
Query: 141 NVSKAEAFPQISAEVAKENPPVGAKRRGGPGGLNKVCGVSPELQAVVGQPAMPRTEIVKQ 200
N S+ F + K+ P A G G + K+C +S ELQ V M R ++VK
Sbjct: 167 NTSEGGRFANNKKKKVKD--P-NADMSGVFGPMTKLCYISTELQQVTKDQWMKRCDVVKA 223
Query: 201 LWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEPTKESSKRF 260
LW YI++NNL+DP N + IICD L +F+ + F M K L +HII T + +
Sbjct: 224 LWDYIKENNLKDPKNGQYIICDSTLESIFKKNRLKGFGMVKFLTRHIIG---TSDMAPEM 280
Query: 261 KPDAES 266
+ +AE+
Sbjct: 281 REEAEA 286
>FB|FBgn0035370 [details] [associations]
symbol:CG1240 species:7227 "Drosophila melanogaster"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003121 InterPro:IPR009057 Pfam:PF02201 EMBL:AE014296
GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF47592 InterPro:IPR014876
Pfam:PF08766 KO:K15223 OMA:FRTFGML GeneTree:ENSGT00520000059577
EMBL:AY061488 RefSeq:NP_647745.1 UniGene:Dm.3583 SMR:Q9VZY0
MINT:MINT-927607 STRING:Q9VZY0 EnsemblMetazoa:FBtr0072969
GeneID:38341 KEGG:dme:Dmel_CG1240 UCSC:CG1240-RA
FlyBase:FBgn0035370 eggNOG:NOG264204 InParanoid:Q9VZY0
OrthoDB:EOG4M907W ChiTaRS:CG1240 GenomeRNAi:38341 NextBio:808111
Uniprot:Q9VZY0
Length = 244
Score = 162 (62.1 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 36/91 (39%), Positives = 52/91 (57%)
Query: 164 AKRRGGPG------GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKR 217
AK GG G G + +SPEL A++G+ ++PR E+VK++WA I++ +L DP NK+
Sbjct: 153 AKAAGGTGSGRKSTGFTRAYNLSPELSALMGESSLPRHEVVKKVWAIIKERDLYDPKNKQ 212
Query: 218 KIICDDALRVVFETDCTDMFKMNKLLAKHII 248
ICDD L V + F M K L H +
Sbjct: 213 FAICDDELMKVMKIRRFRTFGMLKHLKPHFL 243
>TAIR|locus:2028671 [details] [associations]
symbol:AT1G31760 "AT1G31760" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003121 Pfam:PF02201 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC074360 EMBL:AC079041
SUPFAM:SSF47592 eggNOG:COG5531 InterPro:IPR019835 SMART:SM00151
HOGENOM:HOG000225318 ProtClustDB:CLSN2688164 EMBL:AY085089
EMBL:BT024754 IPI:IPI00536805 PIR:B86441 RefSeq:NP_564382.1
UniGene:At.40279 ProteinModelPortal:Q9C504 SMR:Q9C504 IntAct:Q9C504
STRING:Q9C504 PaxDb:Q9C504 PRIDE:Q9C504 EnsemblPlants:AT1G31760.1
GeneID:840063 KEGG:ath:AT1G31760 TAIR:At1g31760 InParanoid:Q9C504
OMA:GITEIMK PhylomeDB:Q9C504 Genevestigator:Q9C504 Uniprot:Q9C504
Length = 112
Score = 144 (55.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 29/80 (36%), Positives = 51/80 (63%)
Query: 169 GPG-GLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRV 227
G G G+ K VS +L + G+ + R +K++W Y++ +NLQ+P+NK++I CDD L+
Sbjct: 28 GEGKGIFKTRPVSQQLASFAGERELTRGSALKKVWEYVKLHNLQNPANKKEIHCDDKLKT 87
Query: 228 VFE-TDCTDMFKMNKLLAKH 246
+F+ D + ++ KLL+ H
Sbjct: 88 IFDGKDKVGITEIMKLLSPH 107
Score = 127 (49.8 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 280 ISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELL-GCESIS 338
+S+ LA F G RE+ + A K+VWEY+K+++L++P N I CD KL+ + G + +
Sbjct: 39 VSQQLASFAGE--RELTRGSALKKVWEYVKLHNLQNPANKKEIHCDDKLKTIFDGKDKVG 96
Query: 339 ALGIQEMLARNHF 351
I ++L+ HF
Sbjct: 97 ITEIMKLLSP-HF 108
>TAIR|locus:2116302 [details] [associations]
symbol:AT4G26810 "AT4G26810" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003121 Pfam:PF02201 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL035440 EMBL:AL161565
SUPFAM:SSF47592 HOGENOM:HOG000225318 EMBL:BT010795 EMBL:BT011270
IPI:IPI00527090 PIR:T04804 RefSeq:NP_001119064.1 RefSeq:NP_194411.1
UniGene:At.32149 ProteinModelPortal:Q9SZ21 SMR:Q9SZ21 IntAct:Q9SZ21
PRIDE:Q9SZ21 DNASU:828788 EnsemblPlants:AT4G26810.1
EnsemblPlants:AT4G26810.2 GeneID:828788 KEGG:ath:AT4G26810
TAIR:At4g26810 eggNOG:NOG291903 InParanoid:Q9SZ21 OMA:MSHISFF
PhylomeDB:Q9SZ21 ProtClustDB:CLSN2686051 ArrayExpress:Q9SZ21
Genevestigator:Q9SZ21 Uniprot:Q9SZ21
Length = 106
Score = 131 (51.2 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 29/89 (32%), Positives = 46/89 (51%)
Query: 171 GGLNKVCGVSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALR-VVF 229
G L + + L+ VGQ + R ++W+YI+ NNLQDP NK +ICD+ L+ ++
Sbjct: 18 GNLIDLVNLPSTLRNFVGQSQISRLGCFMRVWSYIKTNNLQDPKNKNVVICDEKLKSILL 77
Query: 230 ETDCTDMFKMNKLLAKHIIPLEPTKESSK 258
++ + L+ H P E K S K
Sbjct: 78 GKQRVELVDLPSLIKLHF-PKEQKKNSQK 105
Score = 115 (45.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 278 VIISEALAKFLGTGGREMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRE-LLGCES 336
V + L F+G ++ + RVW YIK N+L+DP N V++CD KL+ LLG +
Sbjct: 24 VNLPSTLRNFVGQS--QISRLGCFMRVWSYIKTNNLQDPKNKNVVICDEKLKSILLGKQR 81
Query: 337 ISALGIQEMLARNHFLRQ 354
+ + + ++ + HF ++
Sbjct: 82 VELVDLPSLI-KLHFPKE 98
>ASPGD|ASPL0000017588 [details] [associations]
symbol:AN10524 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0016586 "RSC
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003121 Pfam:PF02201
EMBL:BN001302 SUPFAM:SSF47592 EnsemblFungi:CADANIAT00004436
OMA:TDKNIPD Uniprot:C8V4A6
Length = 472
Score = 117 (46.2 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 27/76 (35%), Positives = 39/76 (51%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+S EL V+ R+ IV +W YIR LQ+ KR + CDD LR +F D +
Sbjct: 250 LSKELAEVLDVEEETRSGIVLGIWDYIRAMGLQEDEEKRLVRCDDRLRAIFGRDQMFFPQ 309
Query: 239 MNKLLAKHIIPLEPTK 254
+ + + H PL+P K
Sbjct: 310 IPESIGPHTSPLDPIK 325
Score = 37 (18.1 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 294 EMLQAEATKRVWEYIKVNHLEDPLNSMVILCDAKLRELLGCESISALGIQEML 346
E + T V++ I+V +EDPL S ++ + G I+ L Q L
Sbjct: 334 EEFHKDPTPTVYD-IQVA-VEDPLRSKMLALTQNPQYAAGMRQIAQLDDQVAL 384
Score = 37 (18.1 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 3 SDQEIAKGVETLLRQSDRNASTSLNGVVKQLEAKLGLDLSHKAGFIRDQISLLLRSH 59
+D+ I GVE ++ SL + K+L+A + K I+D IS ++ +
Sbjct: 36 TDKNIPDGVEDVVIGEGVQQYKSLRDLEKRLDAAI----VRKRLDIQDSISKTVKKY 88
>POMBASE|SPAC23G3.10c [details] [associations]
symbol:ssr3 "SWI/SNF and RSC complex subunit Ssr3"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0000991 "core RNA polymerase II binding
transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IC]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0016586 "RSC
complex" evidence=IDA] InterPro:IPR003121 Pfam:PF02201
PomBase:SPAC23G3.10c GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0006357 GO:GO:0006338 GO:GO:0000790
GO:GO:0016514 GO:GO:0016586 GO:GO:0000991 SUPFAM:SSF47592
eggNOG:COG5531 OrthoDB:EOG4N8VDJ KO:K11650 OMA:PLKSQMS PIR:T50184
RefSeq:NP_593110.1 HSSP:Q61466 ProteinModelPortal:Q9P7S3
DIP:DIP-48385N STRING:Q9P7S3 EnsemblFungi:SPAC23G3.10c.1
GeneID:2541438 KEGG:spo:SPAC23G3.10c NextBio:20802540
Uniprot:Q9P7S3
Length = 425
Score = 115 (45.5 bits), Expect = 0.00050, P = 0.00050
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 194 RTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHIIPLEP 252
R +IV LW YI+ + LQD KR I CD ALR +FE D ++ +L+ + + P++P
Sbjct: 223 RPDIVSYLWQYIKFHRLQDMEEKRLINCDKALRDLFEADRLYFPRIPELMNRFLEPIDP 281
>UNIPROTKB|H9KZE0 [details] [associations]
symbol:SMARCD1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006337 "nucleosome disassembly" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0032947 "protein
complex scaffold" evidence=IEA] [GO:0048096 "chromatin-mediated
maintenance of transcription" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA]
InterPro:IPR003121 Pfam:PF02201 SUPFAM:SSF47592
GeneTree:ENSGT00390000017809 InterPro:IPR019835 SMART:SM00151
OMA:NTFYPSK EMBL:AADN02072424 Ensembl:ENSGALT00000010024
Uniprot:H9KZE0
Length = 516
Score = 115 (45.5 bits), Expect = 0.00067, P = 0.00067
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+ P L ++G R I++ LW YI+ + LQDP + +ICD L+ +FE+ +
Sbjct: 298 LDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREYVICDKYLQQIFESQRMKFSE 357
Query: 239 MNKLLAKHIIPLEP 252
+ + L ++P EP
Sbjct: 358 IPQRLHALLMPPEP 371
>UNIPROTKB|F1MTG9 [details] [associations]
symbol:SMARCD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily D member 1"
species:9913 "Bos taurus" [GO:0071565 "nBAF complex" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=IEA]
[GO:0032947 "protein complex scaffold" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0006337 "nucleosome
disassembly" evidence=IEA] InterPro:IPR003121 Pfam:PF02201
GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0048096
GO:GO:0006337 SUPFAM:SSF47592 GeneTree:ENSGT00390000017809
IPI:IPI00723099 UniGene:Bt.87407 InterPro:IPR019835 SMART:SM00151
OMA:NTFYPSK EMBL:DAAA02012932 Ensembl:ENSBTAT00000001284
Uniprot:F1MTG9
Length = 515
Score = 114 (45.2 bits), Expect = 0.00086, P = 0.00086
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+ P L ++G R I++ LW YI+ + LQDP + +ICD L+ +FE+ +
Sbjct: 297 LDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSE 356
Query: 239 MNKLLAKHIIPLEP 252
+ + L ++P EP
Sbjct: 357 IPQRLHALLMPPEP 370
>UNIPROTKB|Q2TBN1 [details] [associations]
symbol:SMARCD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily D member 1"
species:9913 "Bos taurus" [GO:0071565 "nBAF complex" evidence=ISS]
[GO:0071564 "npBAF complex" evidence=ISS] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] InterPro:IPR003121 Pfam:PF02201
GO:GO:0007399 GO:GO:0016568 GO:GO:0071564 GO:GO:0071565
SUPFAM:SSF47592 eggNOG:COG5531 EMBL:BC109890 IPI:IPI00723099
RefSeq:NP_001033648.1 UniGene:Bt.87407 ProteinModelPortal:Q2TBN1
SMR:Q2TBN1 STRING:Q2TBN1 PRIDE:Q2TBN1 GeneID:533232 KEGG:bta:533232
CTD:6602 HOGENOM:HOG000240746 InParanoid:Q2TBN1 KO:K11650
OrthoDB:EOG4DNF48 NextBio:20875968 InterPro:IPR019835 SMART:SM00151
Uniprot:Q2TBN1
Length = 515
Score = 114 (45.2 bits), Expect = 0.00086, P = 0.00086
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+ P L ++G R I++ LW YI+ + LQDP + +ICD L+ +FE+ +
Sbjct: 297 LDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSE 356
Query: 239 MNKLLAKHIIPLEP 252
+ + L ++P EP
Sbjct: 357 IPQRLHALLMPPEP 370
>UNIPROTKB|Q96GM5 [details] [associations]
symbol:SMARCD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily D member 1"
species:9606 "Homo sapiens" [GO:0007399 "nervous system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0032947 "protein complex scaffold" evidence=IDA]
[GO:0048096 "chromatin-mediated maintenance of transcription"
evidence=IMP] [GO:0006338 "chromatin remodeling" evidence=IDA;IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0071564 "npBAF
complex" evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS]
[GO:0003713 "transcription coactivator activity" evidence=NAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=NAS] [GO:0006337 "nucleosome disassembly"
evidence=IDA] InterPro:IPR003121 Pfam:PF02201 GO:GO:0007399
GO:GO:0006357 GO:GO:0003713 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0032947 EMBL:AC025154 GO:GO:0048096
GO:GO:0006337 SUPFAM:SSF47592 eggNOG:COG5531 CTD:6602
HOGENOM:HOG000240746 KO:K11650 OrthoDB:EOG4DNF48 InterPro:IPR019835
SMART:SM00151 EMBL:AF109733 EMBL:U66617 EMBL:BC009368
IPI:IPI00852816 IPI:IPI00853408 RefSeq:NP_003067.3
RefSeq:NP_620710.2 UniGene:Hs.79335 ProteinModelPortal:Q96GM5
SMR:Q96GM5 DIP:DIP-33390N IntAct:Q96GM5 MINT:MINT-1144212
STRING:Q96GM5 PhosphoSite:Q96GM5 DMDM:238054318 PaxDb:Q96GM5
PRIDE:Q96GM5 DNASU:6602 Ensembl:ENST00000381513
Ensembl:ENST00000394963 GeneID:6602 KEGG:hsa:6602 UCSC:uc001rvx.4
UCSC:uc001rvy.4 GeneCards:GC12P050478 HGNC:HGNC:11106 HPA:HPA004101
MIM:601735 neXtProt:NX_Q96GM5 PharmGKB:PA35956 HOVERGEN:HBG054046
InParanoid:Q96GM5 OMA:NTFYPSK ChiTaRS:SMARCD1 GenomeRNAi:6602
NextBio:25683 ArrayExpress:Q96GM5 Bgee:Q96GM5 CleanEx:HS_SMARCD1
Genevestigator:Q96GM5 Uniprot:Q96GM5
Length = 515
Score = 114 (45.2 bits), Expect = 0.00086, P = 0.00086
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+ P L ++G R I++ LW YI+ + LQDP + +ICD L+ +FE+ +
Sbjct: 297 LDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSE 356
Query: 239 MNKLLAKHIIPLEP 252
+ + L ++P EP
Sbjct: 357 IPQRLHALLMPPEP 370
>RGD|1305406 [details] [associations]
symbol:Smarcd1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily d, member 1"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006337 "nucleosome disassembly" evidence=IEA;ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016514 "SWI/SNF complex"
evidence=IEA;ISO] [GO:0032947 "protein complex scaffold"
evidence=IEA;ISO] [GO:0048096 "chromatin-mediated maintenance of
transcription" evidence=IEA;ISO] [GO:0071564 "npBAF complex"
evidence=IEA;ISO] [GO:0071565 "nBAF complex" evidence=IEA;ISO]
InterPro:IPR003121 Pfam:PF02201 RGD:1305406 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 GO:GO:0048096 GO:GO:0006337
EMBL:CH474035 SUPFAM:SSF47592 GeneTree:ENSGT00390000017809 CTD:6602
KO:K11650 OrthoDB:EOG4DNF48 InterPro:IPR019835 SMART:SM00151
IPI:IPI00366479 RefSeq:NP_001102222.1 UniGene:Rn.21196
Ensembl:ENSRNOT00000043163 GeneID:363002 KEGG:rno:363002
UCSC:RGD:1305406 NextBio:682087 Uniprot:D3ZBS9
Length = 515
Score = 114 (45.2 bits), Expect = 0.00086, P = 0.00086
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 179 VSPELQAVVGQPAMPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVFETDCTDMFK 238
+ P L ++G R I++ LW YI+ + LQDP + +ICD L+ +FE+ +
Sbjct: 297 LDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSE 356
Query: 239 MNKLLAKHIIPLEP 252
+ + L ++P EP
Sbjct: 357 IPQRLHALLMPPEP 370
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.375 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 355 285 0.00085 115 3 11 22 0.40 34
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 596 (63 KB)
Total size of DFA: 186 KB (2107 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.15u 0.19s 22.34t Elapsed: 00:00:00
Total cpu time: 22.15u 0.19s 22.34t Elapsed: 00:00:00
Start: Sat May 11 15:37:21 2013 End: Sat May 11 15:37:21 2013